Query 043727
Match_columns 275
No_of_seqs 251 out of 1902
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 13:13:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043727.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043727hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3n5f_A L-carbamoylase, N-carba 100.0 8.4E-42 2.9E-46 311.6 29.2 264 3-273 93-363 (408)
2 2v8h_A Beta-alanine synthase; 100.0 7.8E-38 2.7E-42 290.5 26.1 262 3-273 127-403 (474)
3 1z2l_A Allantoate amidohydrola 100.0 3.7E-37 1.3E-41 282.0 27.0 263 3-273 97-367 (423)
4 3ram_A HMRA protein; two-domai 100.0 1.6E-29 5.6E-34 229.4 19.4 214 6-273 100-322 (394)
5 3io1_A Aminobenzoyl-glutamate 100.0 2.4E-28 8.1E-33 225.1 22.8 217 4-273 154-383 (445)
6 3gb0_A Peptidase T; NP_980509. 100.0 1.9E-27 6.3E-32 214.1 18.2 212 3-273 111-330 (373)
7 1ysj_A Protein YXEP; M20 famil 100.0 2.4E-27 8.2E-32 215.8 18.9 219 3-273 126-356 (404)
8 3rza_A Tripeptidase; phosphory 100.0 3.3E-27 1.1E-31 214.3 18.8 211 3-273 132-350 (396)
9 1xmb_A IAA-amino acid hydrolas 99.9 2.5E-27 8.5E-32 216.6 17.1 220 3-273 120-354 (418)
10 1cg2_A Carboxypeptidase G2; me 99.9 6.7E-27 2.3E-31 212.0 17.9 215 3-273 122-346 (393)
11 3pfo_A Putative acetylornithin 99.9 1.8E-25 6E-30 205.0 19.0 213 3-273 147-385 (433)
12 3ife_A Peptidase T; metallopep 99.9 6E-26 2E-30 208.4 14.2 210 3-273 169-389 (434)
13 1vgy_A Succinyl-diaminopimelat 99.9 3.3E-24 1.1E-28 194.3 20.1 220 3-273 106-336 (393)
14 3isz_A Succinyl-diaminopimelat 99.9 9.5E-24 3.2E-28 189.8 20.6 220 3-273 103-333 (377)
15 3dlj_A Beta-Ala-His dipeptidas 99.9 2E-23 7E-28 194.1 17.0 225 3-273 146-437 (485)
16 2f7v_A Aectylcitrulline deacet 99.9 8.6E-23 2.9E-27 183.5 17.9 202 3-273 109-326 (369)
17 3tx8_A Succinyl-diaminopimelat 99.9 1.7E-23 6E-28 187.9 12.3 209 3-273 106-328 (369)
18 2rb7_A Peptidase, M20/M25/M40 99.9 4.4E-23 1.5E-27 185.1 12.5 199 3-273 103-316 (364)
19 2zog_A Cytosolic non-specific 99.9 3.3E-22 1.1E-26 185.5 16.1 224 3-273 139-430 (479)
20 1fno_A Peptidase T; metallo pe 99.9 9.6E-22 3.3E-26 179.4 18.2 207 3-273 143-363 (417)
21 3ct9_A Acetylornithine deacety 99.9 8.7E-23 3E-27 182.7 10.2 195 3-271 108-313 (356)
22 3pfe_A Succinyl-diaminopimelat 99.9 6.9E-22 2.3E-26 183.2 14.1 220 3-273 133-423 (472)
23 2pok_A Peptidase, M20/M25/M40 99.9 4.8E-21 1.6E-25 177.9 15.8 220 3-273 150-436 (481)
24 2qyv_A XAA-His dipeptidase; YP 99.8 6.9E-19 2.4E-23 163.6 23.7 220 3-273 119-441 (487)
25 3khx_A Putative dipeptidase sa 99.8 1.3E-19 4.6E-24 168.6 16.3 227 3-273 141-447 (492)
26 3mru_A Aminoacyl-histidine dip 99.8 1.6E-18 5.4E-23 161.3 19.2 142 121-274 200-444 (490)
27 1lfw_A PEPV; hydrolase, dipept 99.8 1.1E-19 3.7E-24 168.2 11.2 224 3-272 122-422 (470)
28 1q7l_A Aminoacylase-1; catalys 97.6 6.9E-05 2.4E-09 60.7 5.7 45 3-51 116-160 (198)
29 2afw_A Glutaminyl-peptide cycl 97.6 4.4E-05 1.5E-09 67.0 4.6 50 3-52 130-190 (329)
30 1tkj_A Aminopeptidase, SGAP; d 97.6 4.8E-05 1.6E-09 65.3 4.5 46 3-53 100-145 (284)
31 1rtq_A Bacterial leucyl aminop 97.6 5.6E-05 1.9E-09 65.3 4.7 44 3-51 120-163 (299)
32 3tc8_A Leucine aminopeptidase; 97.4 0.00014 4.9E-09 63.1 5.5 49 3-53 130-186 (309)
33 3pb6_X Glutaminyl-peptide cycl 97.4 0.00011 3.7E-09 64.4 4.0 48 3-52 137-194 (330)
34 3iib_A Peptidase M28; YP_92679 97.4 0.00011 3.6E-09 67.2 3.9 46 3-53 272-317 (444)
35 3gux_A Putative Zn-dependent e 97.3 0.00019 6.5E-09 62.4 5.3 49 3-53 132-189 (314)
36 3t68_A Succinyl-diaminopimelat 97.1 0.00059 2E-08 57.8 5.5 44 3-51 106-150 (268)
37 4h2k_A Succinyl-diaminopimelat 97.1 0.00061 2.1E-08 57.8 5.4 44 3-51 106-150 (269)
38 2ek8_A Aminopeptidase; metallo 97.0 0.00053 1.8E-08 62.1 4.9 45 3-54 243-287 (421)
39 4f9u_A CG32412; alpha/beta hyd 97.0 0.00042 1.4E-08 60.1 4.1 51 3-53 106-164 (312)
40 3kas_A Transferrin receptor pr 96.9 0.00065 2.2E-08 64.6 4.1 46 3-53 301-350 (640)
41 3fed_A Glutamate carboxypeptid 96.8 0.00083 2.8E-08 64.5 4.5 46 3-53 347-395 (707)
42 4fai_A CG5976, isoform B; alph 96.7 0.0011 3.7E-08 58.1 3.8 49 3-51 132-186 (330)
43 2gre_A Deblocking aminopeptida 96.6 0.0011 3.7E-08 58.4 3.6 42 3-49 189-230 (349)
44 4fuu_A Leucine aminopeptidase; 96.2 0.0055 1.9E-07 53.0 5.5 48 3-52 130-186 (309)
45 1vhe_A Aminopeptidase/glucanas 96.1 0.0052 1.8E-07 54.5 5.0 41 3-50 187-227 (373)
46 2wyr_A Cobalt-activated peptid 96.1 0.0028 9.6E-08 55.2 3.0 42 3-51 176-217 (332)
47 1y0y_A FRV operon protein FRVX 95.5 0.0068 2.3E-07 53.3 3.1 39 3-50 185-223 (353)
48 2fvg_A Endoglucanase; TM1049, 95.0 0.0091 3.1E-07 52.2 2.2 39 3-50 170-208 (340)
49 1vho_A Endoglucanase; structur 91.7 0.17 5.8E-06 44.0 4.6 41 3-50 175-215 (346)
50 1ylo_A Hypothetical protein SF 91.5 0.17 6E-06 43.9 4.5 40 3-49 172-211 (348)
51 1q7l_B Aminoacylase-1; catalys 90.3 0.21 7.3E-06 34.2 3.2 33 241-273 2-34 (88)
52 3kl9_A PEPA, glutamyl aminopep 89.0 0.34 1.2E-05 42.6 4.2 41 3-50 185-225 (355)
53 3t68_A Succinyl-diaminopimelat 85.7 0.48 1.6E-05 39.6 3.1 40 234-273 185-225 (268)
54 2vpu_A TET3, 354AA long hypoth 82.9 0.67 2.3E-05 40.6 2.9 38 3-49 188-225 (354)
55 1ylo_A Hypothetical protein SF 82.7 1.3 4.4E-05 38.3 4.6 79 184-273 212-293 (348)
56 3kl9_A PEPA, glutamyl aminopep 80.8 1.2 4E-05 39.1 3.6 39 235-273 263-301 (355)
57 3cpx_A Aminopeptidase, M42 fam 79.9 0.66 2.3E-05 39.9 1.7 33 3-48 168-200 (321)
58 2wyr_A Cobalt-activated peptid 78.3 1.9 6.6E-05 37.0 4.2 39 235-273 254-292 (332)
59 3isx_A Endoglucanase; TM1050, 77.6 1.3 4.5E-05 38.6 2.9 37 3-49 183-219 (343)
60 1vho_A Endoglucanase; structur 75.6 1.7 5.8E-05 37.5 3.1 38 235-272 251-290 (346)
61 2vpu_A TET3, 354AA long hypoth 72.8 3.4 0.00012 36.1 4.3 37 236-272 265-303 (354)
62 4h2k_A Succinyl-diaminopimelat 71.8 2.6 9E-05 35.0 3.3 35 239-273 190-225 (269)
63 3isx_A Endoglucanase; TM1050, 69.4 2.7 9.3E-05 36.5 2.9 37 236-272 263-300 (343)
64 3k9t_A Putative peptidase; str 66.2 5.2 0.00018 35.8 4.0 38 3-51 199-236 (435)
65 1vhe_A Aminopeptidase/glucanas 65.5 4.4 0.00015 35.4 3.5 37 235-271 270-307 (373)
66 3cpx_A Aminopeptidase, M42 fam 64.1 4.1 0.00014 34.9 2.9 66 186-271 208-276 (321)
67 1y0y_A FRV operon protein FRVX 63.0 5.3 0.00018 34.5 3.5 36 236-271 267-303 (353)
68 2gre_A Deblocking aminopeptida 57.0 7.5 0.00026 33.5 3.4 35 238-272 267-302 (349)
69 2o8m_C Protease; NS3, NS4A, vi 47.5 16 0.00056 18.6 2.3 22 169-191 3-24 (26)
70 2glj_A Probable M18-family ami 46.6 9.5 0.00033 34.5 2.4 30 3-36 264-293 (461)
71 2glf_A Probable M18-family ami 46.0 13 0.00044 33.5 3.2 29 3-36 252-280 (450)
72 1y7e_A Probable M18-family ami 40.2 6 0.0002 35.8 0.0 31 3-36 258-288 (458)
73 2fvg_A Endoglucanase; TM1049, 37.8 22 0.00076 30.3 3.3 36 238-273 254-290 (340)
74 3qk7_A Transcriptional regulat 32.7 52 0.0018 26.8 4.8 33 6-38 197-229 (294)
75 2d16_A Hypothetical protein PH 31.6 61 0.0021 24.4 4.3 63 181-254 12-78 (162)
76 3k9c_A Transcriptional regulat 30.6 54 0.0019 26.6 4.5 33 6-38 195-227 (289)
77 3jy6_A Transcriptional regulat 29.6 53 0.0018 26.4 4.2 33 6-38 191-223 (276)
78 3dbi_A Sugar-binding transcrip 26.8 63 0.0022 26.9 4.3 33 6-38 252-284 (338)
79 3hcw_A Maltose operon transcri 25.1 68 0.0023 26.0 4.2 31 6-36 202-232 (295)
80 2rgy_A Transcriptional regulat 24.2 78 0.0027 25.6 4.3 33 6-38 199-231 (290)
81 3bbl_A Regulatory protein of L 23.4 74 0.0025 25.7 4.0 32 6-37 198-229 (287)
82 3jvd_A Transcriptional regulat 22.8 73 0.0025 26.6 4.0 33 6-38 241-273 (333)
83 3h5o_A Transcriptional regulat 22.4 70 0.0024 26.7 3.7 33 6-38 249-281 (339)
84 3kke_A LACI family transcripti 22.3 75 0.0026 25.9 3.9 31 6-36 207-237 (303)
85 3hs3_A Ribose operon repressor 22.3 66 0.0023 25.9 3.5 32 6-37 188-219 (277)
86 3kjx_A Transcriptional regulat 22.1 66 0.0023 26.9 3.5 32 6-37 257-288 (344)
87 3e61_A Putative transcriptiona 21.9 68 0.0023 25.6 3.5 33 6-38 187-219 (277)
88 3huu_A Transcription regulator 21.6 75 0.0026 25.9 3.7 31 6-36 212-242 (305)
89 3kz5_E Protein SOPB; partition 21.5 1.3E+02 0.0046 18.0 3.7 24 189-212 21-47 (52)
90 2fep_A Catabolite control prot 21.3 80 0.0027 25.5 3.8 32 6-37 205-236 (289)
91 3gv0_A Transcriptional regulat 21.3 75 0.0026 25.7 3.6 32 6-37 198-229 (288)
92 3vat_A Dnpep, aspartyl aminope 20.6 38 0.0013 30.9 1.7 39 3-47 288-330 (496)
93 2o20_A Catabolite control prot 20.6 87 0.003 26.0 3.9 32 6-37 249-280 (332)
94 3egc_A Putative ribose operon 20.5 81 0.0028 25.4 3.7 32 6-37 196-227 (291)
95 3gyb_A Transcriptional regulat 20.4 75 0.0026 25.4 3.4 31 6-36 186-216 (280)
96 3k4h_A Putative transcriptiona 20.3 78 0.0027 25.4 3.5 31 6-36 202-232 (292)
97 3tb6_A Arabinose metabolism tr 20.0 84 0.0029 25.2 3.7 31 6-36 211-241 (298)
No 1
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=100.00 E-value=8.4e-42 Score=311.57 Aligned_cols=264 Identities=33% Similarity=0.470 Sum_probs=234.9
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhhhccCCchhhhhcccCCCCCcHHHHHHHcCCCCC
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIESLAKDLISTVDGQNISFLHAARSAGHAKK 82 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~~~~~~~~~~~~~~~~~~g~~~~e~~~~~g~~~~ 82 (275)
.|++++|++++.|++.+.+++++|.|+++++||++|||.|+.||+.+.+.++ ++.+ .++|.+|+++.+++.+.|+.++
T Consensus 93 ~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~~~~~~g~~Gs~~~~~~~~-~~~~-~~~~~~G~~~~~~l~~~G~~~~ 170 (408)
T 3n5f_A 93 LGVLAGVEVVQTMNEHGVVTHHPIEVVAFTDEEGARFRFGMIGSRAMAGTLP-PEAL-ECRDAEGISLAEAMKQAGLDPD 170 (408)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSSCEEEEEESCSSCTTTTCCCHHHHHHHTCCC-GGGG-SCBCTTCCBHHHHHHHTTCCGG
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccccCCCCcCHHHHHcCCC-HHHh-hccCCCCCCHHHHHHHhCCChh
Confidence 5899999999999999988999999999999999999999999999998876 4555 6678899999999999999753
Q ss_pred CCCcchhhccCCCceEEEEeecccccccccCCCceEEEEeeecceEEEEEEEecCCCCCcchh-hH---HHHHHHHHHHH
Q 043727 83 HNDLSSVFLKKGSYSAFVELQIEQGLILEEEGTSIVIVTAIAASASIKVDFEGNEGHAGAVLM-PN---SLAAAEVALAV 158 (275)
Q Consensus 83 ~~~~~~~~~~~~~v~~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~i~i~G~~~Hag~~p~-~g---i~aaa~~i~~l 158 (275)
.+....+++.++++++++|++||+++|+.+.+++++.+++|..+|+|+++|+++|+|+.|+ .+ |.++++++.+|
T Consensus 171 --~~~~~~~~~~~~~~~~~lhi~~g~~le~~~~~~gi~~~~~g~~~~~i~v~G~~~Hags~P~~~g~nAi~~aa~~i~~l 248 (408)
T 3n5f_A 171 --RLPQAARKPGTVKAYVELHIEQGRVLEETGLPVGIVTGIAGLIWVKFTIEGKAEHAGATPMSLRRDPMAAAAQIIIVI 248 (408)
T ss_dssp --GGGGGCCCTTTEEEEEEEEECSSSHHHHHTCSEEEEEEECEEEEEEEEEECCCEETTTSCTTTCCCHHHHHHHHHHHH
T ss_pred --hhhhcccCccCccEEEEEeeccchhHHHcCCCeEEEEEeccceEEEEEEEEEcCcCCCCccccccCHHHHHHHHHHHH
Confidence 2333333455899999999999999998888999999999999999999999999977895 55 99999999999
Q ss_pred HHHHHhhCCCCeEEEEEEEEeeCCCCceeCceEEEEEe---CCHhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEecCCCC
Q 043727 159 EKHVLESGSIDTVGTVGILELHSGAINSIPSKSHLEID---IDEKRRKTVIEKIHQSAITIAKNRGVTLSEFKIVNQDPP 235 (275)
Q Consensus 159 ~~~~~~~~~~~~~~tvg~i~~g~~~~NvIP~~a~~~~d---~~~e~~~~~~~~i~~~~~~~~~~~g~~~~~i~~~~~~p~ 235 (275)
+++.++.+ ..++|+|.|++|+++.|+||++|++.+| ++.+..+++.++|+++++.++..+|+++ ++++...+||
T Consensus 249 ~~~~~~~~--~~~~~vg~i~gG~~~~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~a~~~g~~~-~i~~~~~~p~ 325 (408)
T 3n5f_A 249 EEEARRTG--TTVGTVGQLHVYPGGINVIPERVEFVLDLRDLKAEVRDQVWKAIAVRAETIAKERNVRV-TTERLQEMPP 325 (408)
T ss_dssp HHHHHHHS--SCEEEEEEEEEESCCTTEECSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTCEE-EEEEEEEECC
T ss_pred HHHHHhcC--CcEEEEEEEEecCCCCcCcCCeEEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhCCeE-EEEEecCCCC
Confidence 98875543 7899999999876899999999999999 8899999999999999999988999999 9999888999
Q ss_pred CCCCHHHHHHHHHHHHHhCCCccccCCCCcchHHhhhc
Q 043727 236 ALSDRSIILEAEVALKELNLTYKFMISRAYHDSPFMAR 273 (275)
Q Consensus 236 ~~~d~~l~~~~~~~~~~~g~~~~~~~~~~g~Da~~~~~ 273 (275)
+.+|+++++.++++++++|.+....+++++||+++|.+
T Consensus 326 ~~~d~~l~~~~~~a~~~~g~~~~~~~~~ggtD~~~~~~ 363 (408)
T 3n5f_A 326 VLCSDEVKRAAEAACQKLGYPSFWLPSGAAHDSVQLAP 363 (408)
T ss_dssp EECCHHHHHHHHHHHHHHTCCCCEEEESSCCTTTTTTT
T ss_pred cCCCHHHHHHHHHHHHHcCCCcccCCCcCchHHHHHHH
Confidence 99999999999999998887665667789999999875
No 2
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=100.00 E-value=7.8e-38 Score=290.53 Aligned_cols=262 Identities=21% Similarity=0.237 Sum_probs=225.3
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhhhccCCchhhhhcccC---CCCCcHHHHHHHcCC
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIESLAKDLISTVD---GQNISFLHAARSAGH 79 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~~~~~~~~~~~~~~~~---~~g~~~~e~~~~~g~ 79 (275)
.|++++|++++.|++.+.+++++|.|++++|||++|||.|+.||+++.+.+. .+.+..+.| .+|+++.|+|.+.|+
T Consensus 127 ~gvaa~L~a~~~L~~~~~~~~~~v~lif~~dEE~~~~~~g~~Gs~~l~~~~~-~~~~~~~~d~~~~dg~~~~e~l~~~G~ 205 (474)
T 2v8h_A 127 LGVLAGLEVLRTFKDNNYVPNYDVCVVVWFNAEGARFARSCTGSSVWSHDLS-LEEAYGLMSVGEDKPESVYDSLKNIGY 205 (474)
T ss_dssp HHHHHHHHHHHHHHHHTCCCSSCEEEEECTTCSCSSSSCTTHHHHHHTTSSC-HHHHHTCBCSSCSSCCBHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCEEEEEECCccCCCCCCCcccHHHHHhccC-HhhhhhhcccccccCccHHHHHHhcCC
Confidence 5899999999999999998999999999999999999999999999987554 222322335 799999999999998
Q ss_pred CCCCCCcchhhccCCCceEEEEeecccccccccCCCceEEEEeeecceEEEEEEEecCCCCCcchh-hH---HHHHHHHH
Q 043727 80 AKKHNDLSSVFLKKGSYSAFVELQIEQGLILEEEGTSIVIVTAIAASASIKVDFEGNEGHAGAVLM-PN---SLAAAEVA 155 (275)
Q Consensus 80 ~~~~~~~~~~~~~~~~v~~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~i~i~G~~~Hag~~p~-~g---i~aaa~~i 155 (275)
.++ .+..+.+.++++++++|++||+.++..+...+++.+++|..+|+|+++|+++|+|..|+ .+ |.++++++
T Consensus 206 ~~~----~~~~~~~e~~~~~~~lHi~~g~~l~~~g~~~~i~~~~~G~~~~~i~v~G~~~Hsg~~P~~~g~nAi~~~a~~i 281 (474)
T 2v8h_A 206 IGD----TPASYKENEIDAHFELHIEQGPILEDENKAIGIVTGVQAYNWQKVTVHGVGAHAGTTPWRLRKDALLMSSKMI 281 (474)
T ss_dssp CCS----BCSCTTTSCCSEEEEEEECCSSHHHHTTCSEEEEEEECEEEEEEEEEECCCEETTTCCGGGCCCHHHHHHHHH
T ss_pred ccc----ccccccccchhhheeeeeccCccccccCCcceeEEeecceEEEEEEEEeecCCCCCCCcccCCCHHHHHHHHH
Confidence 642 11222245799999999999999888877889999999999999999999999986797 55 99999999
Q ss_pred HHHHHHHHhhCCCCeEEEEEEEEeeCCCCceeCceEEEEEe---CCHhHHHHHHHHHHHHHHHHHHh---cCCCEEEEEE
Q 043727 156 LAVEKHVLESGSIDTVGTVGILELHSGAINSIPSKSHLEID---IDEKRRKTVIEKIHQSAITIAKN---RGVTLSEFKI 229 (275)
Q Consensus 156 ~~l~~~~~~~~~~~~~~tvg~i~~g~~~~NvIP~~a~~~~d---~~~e~~~~~~~~i~~~~~~~~~~---~g~~~~~i~~ 229 (275)
.+|+.+..+. ..++|+|.|++|+++.|+||++|++++| .+.+..+++.++|++++++.+.. +++++ +++.
T Consensus 282 ~~l~~~~~~~---~~t~~vg~i~gG~~~~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~~~~~~~g~~~-~~~~ 357 (474)
T 2v8h_A 282 VAASEIAQRH---NGLFTCGIIDAKPYSVNIIPGEVSFTLDFRHPSDDVLATMLKEAAAEFDRLIKINDGGALSY-ESET 357 (474)
T ss_dssp HHHHHHHHHT---TCEEECCCEEEESCCTTEECSEEEEEEEEEESCHHHHHHHHHHHHHHHHHHTTCCTTCCCEE-EEEE
T ss_pred HHHHHHHhhc---CCEEEEEEEEecCCCCceeCCEEEEEEEecCCChHHHHHHHHHHHHHHHHHHhhcccCCcEE-EEEE
Confidence 9998876542 5799999999876899999999999999 88899999999999999887766 89999 9988
Q ss_pred ecCCCCCCCCHHHHHHHHHHHHHhC-C-CccccCCCCcchHHhhhc
Q 043727 230 VNQDPPALSDRSIILEAEVALKELN-L-TYKFMISRAYHDSPFMAR 273 (275)
Q Consensus 230 ~~~~p~~~~d~~l~~~~~~~~~~~g-~-~~~~~~~~~g~Da~~~~~ 273 (275)
...+||+.+|+++++.++++++++| . ++....+++|+|+++|++
T Consensus 358 ~~~~~~~~~d~~l~~~~~~a~~~~G~~~~~~~~~~~ggtD~~~~~~ 403 (474)
T 2v8h_A 358 LQVSPAVNFHEVCIECVSRSAFAQFKKDQVRQIWSGAGHDSCQTAP 403 (474)
T ss_dssp EEEECCEECCHHHHHHHHHHHHHHSCGGGEEEEEESSCCTHHHHTT
T ss_pred ecCCCCccCCHHHHHHHHHHHHHcCCCCcceecCCcCCccHHHHHh
Confidence 8888999999999999999999887 6 666677889999999875
No 3
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=100.00 E-value=3.7e-37 Score=282.02 Aligned_cols=263 Identities=24% Similarity=0.341 Sum_probs=226.2
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhhhccCCchhhhhcccCCCCCcHHHHHHHcCCCC-
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIESLAKDLISTVDGQNISFLHAARSAGHAK- 81 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~~~~~~~~~~~~~~~~~~g~~~~e~~~~~g~~~- 81 (275)
.|++++|++++.|++.+.+++++|.|++++|||+++||.|+.||+.+...+. .+.+.+..+.+|+++.+++.+.|+.+
T Consensus 97 ~g~a~~l~a~~~l~~~~~~~~~~v~~i~~~~EE~~~~~~g~~Gs~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~G~~~~ 175 (423)
T 1z2l_A 97 FGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLAN-PDDVRNICDAKGNSFVDAMKACGFTLP 175 (423)
T ss_dssp HHHHHHHHHHHHHHHHHCSCSEEEEEEEESCSSCCSSSCSCHHHHHHTTCCC-GGGTSSCCCSSSCCHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccccCCCcccHHHHHcCCC-HHHHhhhcCcCCcCHHHHHHHcCCccc
Confidence 5899999999999999988999999999999999999989999999987553 23333345789999999999999852
Q ss_pred CCCCcchhhccCCCceEEEEeecccccccccCCCceEEEEeeecceEEEEEEEecCCCCCcchh-hH---HHHHHHHHHH
Q 043727 82 KHNDLSSVFLKKGSYSAFVELQIEQGLILEEEGTSIVIVTAIAASASIKVDFEGNEGHAGAVLM-PN---SLAAAEVALA 157 (275)
Q Consensus 82 ~~~~~~~~~~~~~~v~~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~i~i~G~~~Hag~~p~-~g---i~aaa~~i~~ 157 (275)
+.. + ....++++++++|++||+++++++.+.+++.+++|..+|+|+++|+++|+|+.|+ .+ |.++++++..
T Consensus 176 ~~~----p-~~~~~~~~~~~~h~~~~~~~e~~~~~~~~~~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~~a~~i~~ 250 (423)
T 1z2l_A 176 NAP----L-TPRQDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVYAFSRICHQ 250 (423)
T ss_dssp SSC----C-CCCCCEEEEEEEEECCSSHHHHTTCCEEEEEEECEEEEEEEEEECCCEETTTSCGGGCCCHHHHHHHHHHH
T ss_pred ccc----c-cCCCCceEEEEEEeccCchHHHCCCCeEEEeeEecceEEEEEEEeEcCCCCCCccccCcCHHHHHHHHHHH
Confidence 100 0 0124689999999999998888887889999999999999999999999976786 55 9999999999
Q ss_pred HHHHHHhhCCCCeEEEEEEEEeeCCCCceeCceEEEEEe---CCHhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEecCCC
Q 043727 158 VEKHVLESGSIDTVGTVGILELHSGAINSIPSKSHLEID---IDEKRRKTVIEKIHQSAITIAKNRGVTLSEFKIVNQDP 234 (275)
Q Consensus 158 l~~~~~~~~~~~~~~tvg~i~~g~~~~NvIP~~a~~~~d---~~~e~~~~~~~~i~~~~~~~~~~~g~~~~~i~~~~~~p 234 (275)
|+.+..+.+ +..++|+|.|++|+++.|+||++|++.+| .+.+..+++.++|++++++.+..+|+++ +++....+|
T Consensus 251 l~~~~~~~~-~~~~~~vg~i~gg~~~~NvIP~~a~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~g~~~-~~~~~~~~~ 328 (423)
T 1z2l_A 251 SVEKAKRMG-DPLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQQLENDMRAICDEMDIGI-DIDLWMDEE 328 (423)
T ss_dssp HHHHHHHHC-TTCEEECCCEEEESCCTTEECCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTCEE-EEEEEEEEC
T ss_pred HHHHHHhcC-CCceEEEEEEeecCCcceeECCEEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHhCCeE-EEEEecCCC
Confidence 998766544 36799999999876899999999999999 8889999999999999999888899999 998888889
Q ss_pred CCCCCHHHHHHHHHHHHHhCCCccccCCCCcchHHhhhc
Q 043727 235 PALSDRSIILEAEVALKELNLTYKFMISRAYHDSPFMAR 273 (275)
Q Consensus 235 ~~~~d~~l~~~~~~~~~~~g~~~~~~~~~~g~Da~~~~~ 273 (275)
|+.+|+++++.++++++++|.++....+++++|+++|.+
T Consensus 329 ~~~~~~~l~~~~~~~~~~~g~~~~~~~~~ggtD~~~~~~ 367 (423)
T 1z2l_A 329 PVPMNKELVATLTELCEREKLNYRVMHSGAGHDAQIFAP 367 (423)
T ss_dssp CEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTHHHHTT
T ss_pred CccCCHHHHHHHHHHHHHcCCCeEEecCCCcccHHHHHh
Confidence 999999999999999999887766677889999999864
No 4
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=99.97 E-value=1.6e-29 Score=229.36 Aligned_cols=214 Identities=14% Similarity=-0.005 Sum_probs=176.6
Q ss_pred HHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhh-hhhccCCchhhhhcccCCCCCcHHHHHHHcCCCCCCC
Q 043727 6 LGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSL-LLAGIESLAKDLISTVDGQNISFLHAARSAGHAKKHN 84 (275)
Q Consensus 6 ~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~-~~~~~~~~~~~~~~~~~~~g~~~~e~~~~~g~~~~~~ 84 (275)
+++|.+++.|++.+.+++++|.|++++|||++ ++.|++ .+... |+.
T Consensus 100 a~~l~aa~~L~~~~~~~~g~v~~~f~~~EE~~----~~~Ga~~~~~~~-------------------------g~~---- 146 (394)
T 3ram_A 100 TASVLGAIGLKQVIDQIGGKVVVLGCPAEEGG----ENGSAKASYVKA-------------------------GVI---- 146 (394)
T ss_dssp HHHHHHHHHHHTTHHHHCSEEEEEECCCTTCC----TTCCHHHHHHHH-------------------------TGG----
T ss_pred HHHHHHHHHHHHhHhhCCceEEEEEECCccCC----CCCchHHHHHHc-------------------------CCc----
Confidence 56788899999887678999999999999973 147888 65320 110
Q ss_pred CcchhhccCCCceEEEEeecccccccccCCCceEEEEeeecceEEEEEEEecCCCCCcchhhH---HHHHHHHHHHHHHH
Q 043727 85 DLSSVFLKKGSYSAFVELQIEQGLILEEEGTSIVIVTAIAASASIKVDFEGNEGHAGAVLMPN---SLAAAEVALAVEKH 161 (275)
Q Consensus 85 ~~~~~~~~~~~v~~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~i~i~G~~~Hag~~p~~g---i~aaa~~i~~l~~~ 161 (275)
.++|+++.+|.+++.. + ..+++|..||+|+++|+++|+|+.|+.+ |.+++++++.|+.+
T Consensus 147 ---------~~~d~~~~~h~~~~~~-------~--~~~~~g~~~~~i~v~Gk~~Ha~~~P~~g~nAi~~a~~~i~~l~~l 208 (394)
T 3ram_A 147 ---------DQIDIALMIHPGNETY-------K--TIDTLAVDVLDVKFYGKSAHASENADEALNALDAMISYFNGVAQL 208 (394)
T ss_dssp ---------GGCSEEECCEEESSBB-------C--CCCBCEEEEEEEEEECBCCBHHHHGGGCBCHHHHHHHHHHHHHHH
T ss_pred ---------ccCCEEEEECCccccC-------C--CccccceeEEEEEEEccccccCCCCcCCCCHHHHHHHHHHHHHHH
Confidence 1367899999887531 2 2467899999999999999996589988 99999999999987
Q ss_pred HHhhCCCCeEEEEEEEEeeCCCCceeCceEEEEEe---CCHhHHHHHHHHHHHHHHHHHHhcCCCEEEEEE-ecCCCCCC
Q 043727 162 VLESGSIDTVGTVGILELHSGAINSIPSKSHLEID---IDEKRRKTVIEKIHQSAITIAKNRGVTLSEFKI-VNQDPPAL 237 (275)
Q Consensus 162 ~~~~~~~~~~~tvg~i~~g~~~~NvIP~~a~~~~d---~~~e~~~~~~~~i~~~~~~~~~~~g~~~~~i~~-~~~~p~~~ 237 (275)
..... ...+++++.+++ |++.||||++|++++| ++.+.++++.++|+++++.++..+|+++ ++++ ...+||+.
T Consensus 209 ~~~~~-~~~~~~~~~i~g-G~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~~a~~~g~~~-ei~~~~~~~~~~~ 285 (394)
T 3ram_A 209 RQHIK-KDQRVHGVILDG-GKAANIIPDYTHARFYTRAMTRKELDILTEKVNQIARGAAIQTGCDY-EFGPIQNGVNEFI 285 (394)
T ss_dssp GGGSC-TTCEEEEEEEEB-CSCTTBCCSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTCEE-EEEESSCCBCCCC
T ss_pred HhhCC-CCCeeEEEEEEC-CCCCceeCCeEEEEEEEeeCCHHHHHHHHHHHHHHHHHHHHHhCCeE-EEEEecCCCCCcc
Confidence 54332 345778888886 5899999999999999 8999999999999999999999999999 9998 78899999
Q ss_pred CCHHHHHHHHHHHHHhCCCc-cccCCCCcchHHhhhc
Q 043727 238 SDRSIILEAEVALKELNLTY-KFMISRAYHDSPFMAR 273 (275)
Q Consensus 238 ~d~~l~~~~~~~~~~~g~~~-~~~~~~~g~Da~~~~~ 273 (275)
+|+++++.++++++++|.+. ...+++++||+++|++
T Consensus 286 ~d~~l~~~~~~a~~~~G~~~~~~~~~~g~~D~~~~~~ 322 (394)
T 3ram_A 286 KTPKLDDLFAKYAEEVGEAVIDDDFGYGSTDTGNVSH 322 (394)
T ss_dssp CCHHHHHHHHHHHHHTTCCBCCSCCCCBCCTHHHHTT
T ss_pred CCHHHHHHHHHHHHHhCcccccCCCCcccccHHHHHH
Confidence 99999999999999888333 2467889999999975
No 5
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=99.96 E-value=2.4e-28 Score=225.06 Aligned_cols=217 Identities=17% Similarity=0.225 Sum_probs=176.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhhhccCCchhhhhcccCCCCCcHHHHHHHcCCCCCC
Q 043727 4 LCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIESLAKDLISTVDGQNISFLHAARSAGHAKKH 83 (275)
Q Consensus 4 Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~~~~~~~~~~~~~~~~~~g~~~~e~~~~~g~~~~~ 83 (275)
+++++|.+++.|++.+.+++++|.|++++|||+ ..|++.+... |+.
T Consensus 154 ~~a~~l~aa~~L~~~~~~~~g~v~l~f~p~EE~------~~Ga~~~i~~-------------------------g~~--- 199 (445)
T 3io1_A 154 HTAIGLGLAHVLKQYAAQLNGVIKLIFQPAEEG------TRGARAMVAA-------------------------GVV--- 199 (445)
T ss_dssp HHHHHHHHHHHHHHTGGGCCSEEEEEEESCTTT------TCHHHHHHHT-------------------------TTT---
T ss_pred HHHHHHHHHHHHHhCcCcCCceEEEEEeccccc------cchHHHHHHc-------------------------CCc---
Confidence 578899999999998888999999999999996 3588776431 111
Q ss_pred CCcchhhccCCCceEEEEeecccccccccCCCceEEEEeeec---ceEEEEEEEecCCCCCcchhhH---HHHHHHHHHH
Q 043727 84 NDLSSVFLKKGSYSAFVELQIEQGLILEEEGTSIVIVTAIAA---SASIKVDFEGNEGHAGAVLMPN---SLAAAEVALA 157 (275)
Q Consensus 84 ~~~~~~~~~~~~v~~~~~~Hie~g~~le~~~~~~gvv~~~~G---~~~~~i~i~G~~~Hag~~p~~g---i~aaa~~i~~ 157 (275)
.++|+++.+|..++ ++ .+ . +..+.+| ..||+|+++|+++|+|+.|+.| |.++++++++
T Consensus 200 ----------~~~d~~~~~h~~~~--~~-~g-~--i~~~~~g~~a~~~~~i~v~Gk~~HaGs~P~~g~nAi~~aa~~i~~ 263 (445)
T 3io1_A 200 ----------DDVDYFTAIHIGTG--VP-AG-T--VVCGGDNFMATTKFDVQFSGVAAHAGGKPEDGRNALLAAAQAALG 263 (445)
T ss_dssp ----------TTCSEEEEEEEEEE--EE-TT-B--EESCCCCBCEEEEEEEEEECCCSSTTCCGGGCCCHHHHHHHHHHH
T ss_pred ----------cccceeEEEeccCC--CC-CC-e--EEEecCCeeEEEEEEEEEEeecCCCCCCCcCCcCHHHHHHHHHHH
Confidence 14678999997432 22 11 1 2333333 4799999999999997789988 9999999999
Q ss_pred HHHHHHhhCCCCeEEEEEEEEeeCCCCceeCceEEEEEe---CCHhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEecCCC
Q 043727 158 VEKHVLESGSIDTVGTVGILELHSGAINSIPSKSHLEID---IDEKRRKTVIEKIHQSAITIAKNRGVTLSEFKIVNQDP 234 (275)
Q Consensus 158 l~~~~~~~~~~~~~~tvg~i~~g~~~~NvIP~~a~~~~d---~~~e~~~~~~~~i~~~~~~~~~~~g~~~~~i~~~~~~p 234 (275)
|+.+.+..+ +..++|+|.|++| ++.||||++|++++| ++.+..+.+.++|+++++.++..+|+++ ++++...+|
T Consensus 264 l~~l~~~~~-~~~~~~vg~i~gG-~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~~a~~~g~~~-~i~~~~~~~ 340 (445)
T 3io1_A 264 LHAIPPHSA-GASRVNVGVMQAG-TGRNVVPSSALLKVETRGESEAINQYVFERAQHVVAGAAAMYEARY-ELRMMGAAT 340 (445)
T ss_dssp HHTCCCBTT-BCEEEEEEEEEEC-SCTTSCCCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCEE-EEEEEEEEC
T ss_pred HHHHHhhcC-CCeEEEEEEEecC-CCCceeCCeEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeE-EEEEecCCC
Confidence 988743222 4678999999985 899999999999999 8899999999999999999999999999 999888899
Q ss_pred CCCCCHHHHHHHHHHHHHh-CCCc--cccC-CCCcchHHhhhc
Q 043727 235 PALSDRSIILEAEVALKEL-NLTY--KFMI-SRAYHDSPFMAR 273 (275)
Q Consensus 235 ~~~~d~~l~~~~~~~~~~~-g~~~--~~~~-~~~g~Da~~~~~ 273 (275)
++.+|+++++.++++++++ |.+. .... ++++||+++|++
T Consensus 341 ~~~~d~~l~~~~~~a~~~~~g~~~v~~~~~~~~g~~D~~~~~~ 383 (445)
T 3io1_A 341 ASAPSPAWVDYLREQAARVPGVQQAVDRIAAPAGSEDATLMMA 383 (445)
T ss_dssp CCCCCHHHHHHHHHHHHHSTTCCBCBSSCCCCCBCCTHHHHHH
T ss_pred CcCCCHHHHHHHHHHHHHhcCCccceecCCCCccHHHHHHHHH
Confidence 9999999999999999987 6543 2334 489999999875
No 6
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=99.95 E-value=1.9e-27 Score=214.15 Aligned_cols=212 Identities=17% Similarity=0.190 Sum_probs=174.1
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhhhccCCchhhhhcccCCCCCcHHHHHHHcCCCCC
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIESLAKDLISTVDGQNISFLHAARSAGHAKK 82 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~~~~~~~~~~~~~~~~~~g~~~~e~~~~~g~~~~ 82 (275)
.|++++|++++.|++.+. ++++|.|++++|||. |+.|++.+.. +. +.
T Consensus 111 ~g~a~~l~a~~~l~~~~~-~~~~v~~~~~~~EE~-----g~~Ga~~~~~-----~~--------------------~~-- 157 (373)
T 3gb0_A 111 AGLASMFEAIRVLKEKNI-PHGTIEFIITVGEES-----GLVGAKALDR-----ER--------------------IT-- 157 (373)
T ss_dssp HHHHHHHHHHHHHHHTTC-CCCCEEEEEESCGGG-----TSHHHHHSCG-----GG--------------------CC--
T ss_pred HHHHHHHHHHHHHHhcCC-CCCCEEEEEEecccc-----CchhhhhhCH-----Hh--------------------cC--
Confidence 588999999999999886 789999999999997 5788887621 11 11
Q ss_pred CCCcchhhccCCCceEEEEeecccccccccCCCceEEEEeeecceEEEEEEEecCCCCCcchhhH---HHHHHHHHHHHH
Q 043727 83 HNDLSSVFLKKGSYSAFVELQIEQGLILEEEGTSIVIVTAIAASASIKVDFEGNEGHAGAVLMPN---SLAAAEVALAVE 159 (275)
Q Consensus 83 ~~~~~~~~~~~~~v~~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~i~i~G~~~Hag~~p~~g---i~aaa~~i~~l~ 159 (275)
+-+.+|.+++ .....++.+.+|..+|+|+++|+++|+|..|+.+ +.++++++.+|+
T Consensus 158 ---------------~~~~~~~~~~------~~~g~i~~~~~g~~~~~i~~~G~~~Ha~~~p~~g~nai~~~~~~i~~l~ 216 (373)
T 3gb0_A 158 ---------------AKYGYALDSD------GKVGEIVVAAPTQAKVNAIIRGKTAHAGVAPEKGVSAITIAAKAIAKMP 216 (373)
T ss_dssp ---------------CSEEEEEEEC------SCTTEEEEEECEEEEEEEEEECBCCBTTTCGGGSBCHHHHHHHHHTTSC
T ss_pred ---------------CCEEEEEcCC------CCCCeEEEcCCCcEEEEEEEEeEecCCCCChhhCcCHHHHHHHHHHhcc
Confidence 1123444332 2233577788999999999999999997679988 999999998776
Q ss_pred HHHHhhCCCCeEEEEEEEEeeCCCCceeCceEEEEEe---CCHhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEecCCCCC
Q 043727 160 KHVLESGSIDTVGTVGILELHSGAINSIPSKSHLEID---IDEKRRKTVIEKIHQSAITIAKNRGVTLSEFKIVNQDPPA 236 (275)
Q Consensus 160 ~~~~~~~~~~~~~tvg~i~~g~~~~NvIP~~a~~~~d---~~~e~~~~~~~~i~~~~~~~~~~~g~~~~~i~~~~~~p~~ 236 (275)
.. +.+ +..++|+|.|++| ++.|+||++|++.+| ++.+..+.+.++|++++++.+..+|+++ ++++...+||+
T Consensus 217 ~~--~~~-~~~~~~vg~i~gG-~~~Nvip~~~~~~~d~R~~~~~~~~~~~~~i~~~~~~~~~~~g~~~-~i~~~~~~~~~ 291 (373)
T 3gb0_A 217 LG--RID-SETTANIGRFEGG-TQTNIVCDHVQIFAEARSLINEKMEAQVAKMKEAFETTAKEMGGHA-DVEVNVMYPGF 291 (373)
T ss_dssp CE--EEE-TTEEEEEEEEEEC-SCTTBCCCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCEE-EEEEEEEECCE
T ss_pred cc--cCC-CccccceeEEecC-cccccccceEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCeE-EEEEecccCCc
Confidence 41 122 4678999999985 799999999999999 8889999999999999999999999999 99988888887
Q ss_pred --CCCHHHHHHHHHHHHHhCCCccccCCCCcchHHhhhc
Q 043727 237 --LSDRSIILEAEVALKELNLTYKFMISRAYHDSPFMAR 273 (275)
Q Consensus 237 --~~d~~l~~~~~~~~~~~g~~~~~~~~~~g~Da~~~~~ 273 (275)
.+|+++++.++++++++|.++...+++++||+++|.+
T Consensus 292 ~~~~~~~l~~~~~~~~~~~g~~~~~~~~~g~~D~~~~~~ 330 (373)
T 3gb0_A 292 KFADGDHVVEVAKRAAEKIGRTPSLHQSGGGSDANVIAG 330 (373)
T ss_dssp ECCTTCHHHHHHHHHHHHTTCCCEEEECSSCCHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHhCCCceEecccCcchHHHHHh
Confidence 4688999999999999988776677889999999875
No 7
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=99.95 E-value=2.4e-27 Score=215.76 Aligned_cols=219 Identities=20% Similarity=0.218 Sum_probs=166.4
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhhhccCCchhhhhcccCCCCCcHHHHHHHcCCCCC
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIESLAKDLISTVDGQNISFLHAARSAGHAKK 82 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~~~~~~~~~~~~~~~~~~g~~~~e~~~~~g~~~~ 82 (275)
.|++++|++++.|++.+.+++++|.|++++|||. +.|++.+... |+.
T Consensus 126 g~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~------~~G~~~~~~~-------------------------g~~-- 172 (404)
T 1ysj_A 126 FHTASIIGTAMLLNQRRAELKGTVRFIFQPAEEI------AAGARKVLEA-------------------------GVL-- 172 (404)
T ss_dssp HHHHHHHHHHHHHHTCGGGCSSEEEEEEESCTTT------TCHHHHHHHT-------------------------TTT--
T ss_pred HHHHHHHHHHHHHHhccccCCceEEEEEeccccc------chhHHHHHhc-------------------------CCC--
Confidence 4789999999999998878899999999999996 3688876431 110
Q ss_pred CCCcchhhccCCCceEEEEeecccccccccCCCceEEEEe--eecceEEEEEEEecCCCCCcchhhH---HHHHHHHHHH
Q 043727 83 HNDLSSVFLKKGSYSAFVELQIEQGLILEEEGTSIVIVTA--IAASASIKVDFEGNEGHAGAVLMPN---SLAAAEVALA 157 (275)
Q Consensus 83 ~~~~~~~~~~~~~v~~~~~~Hie~g~~le~~~~~~gvv~~--~~G~~~~~i~i~G~~~Hag~~p~~g---i~aaa~~i~~ 157 (275)
.++++++.+|+|++.. .+ .+.+..+ ++|..+|+|+++|+++|+| .|+.| |.++++++.+
T Consensus 173 -----------~~~d~~i~~h~ep~~~---~g-~v~~~~g~~~~g~~~~~i~v~G~~~Has-~P~~g~nAi~~~~~~i~~ 236 (404)
T 1ysj_A 173 -----------NGVSAIFGMHNKPDLP---VG-TIGVKEGPLMASVDRFEIVIKGKGGHAS-IPNNSIDPIAAAGQIISG 236 (404)
T ss_dssp -----------TTEEEEEEEEEETTSC---TT-EEEECSEEEECCEEEEEEEEECC---------CCCCHHHHHHHHHHH
T ss_pred -----------cCCCEEEEEecCCCCC---Cc-eEEeccChhhcccceEEEEEEccCcccc-CcccCCCHHHHHHHHHHH
Confidence 1367899999986421 11 1222223 6899999999999999996 78877 9999999999
Q ss_pred HHHHHHhh-CC-CCeEEEEEEEEeeCCCCceeCceEEEEEe---CCHhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEecC
Q 043727 158 VEKHVLES-GS-IDTVGTVGILELHSGAINSIPSKSHLEID---IDEKRRKTVIEKIHQSAITIAKNRGVTLSEFKIVNQ 232 (275)
Q Consensus 158 l~~~~~~~-~~-~~~~~tvg~i~~g~~~~NvIP~~a~~~~d---~~~e~~~~~~~~i~~~~~~~~~~~g~~~~~i~~~~~ 232 (275)
|+.+..+. ++ ...++|+|.|++ |++.|+||++|++++| .+.+..+++.++|++++++.+..+|+++ +++....
T Consensus 237 l~~~~~~~~~~~~~~~~~vg~i~g-G~~~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~~~~g~~~-~~~~~~~ 314 (404)
T 1ysj_A 237 LQSVVSRNISSLQNAVVSITRVQA-GTSWNVIPDQAEMEGTVRTFQKEARQAVPEHMRRVAEGIAAGYGAQA-EFKWFPY 314 (404)
T ss_dssp HC-----------CCEEEEEEEEE-CSCSSSCCSEEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHHTTCEE-EEEEEEE
T ss_pred HHHHHhhhcCCCCCcEEEEEEEEc-CCCCceecCceEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCEE-EEEEecC
Confidence 98764332 11 356899999997 5799999999999999 8889999999999999999888899999 9988888
Q ss_pred CCCCCCCHHHHHHHHHHHHHh--CCCccccCCCCcchHHhhhc
Q 043727 233 DPPALSDRSIILEAEVALKEL--NLTYKFMISRAYHDSPFMAR 273 (275)
Q Consensus 233 ~p~~~~d~~l~~~~~~~~~~~--g~~~~~~~~~~g~Da~~~~~ 273 (275)
+||+.+|+++++.++++++++ |.+... .+++++|+++|++
T Consensus 315 ~~~~~~~~~l~~~~~~~~~~~g~g~~~~~-~~~g~tD~~~~~~ 356 (404)
T 1ysj_A 315 LPSVQNDGTFLNAASEAAARLGYQTVHAE-QSPGGEDFALYQE 356 (404)
T ss_dssp ECCEEECGGGHHHHHHHHHHTTCEEEECC-CBSSCCTHHHHHT
T ss_pred CCCccCCHHHHHHHHHHHHHhcCCccccc-cCCccchHHHHHH
Confidence 899988999999999999988 443333 7788999999875
No 8
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=99.95 E-value=3.3e-27 Score=214.32 Aligned_cols=211 Identities=17% Similarity=0.192 Sum_probs=174.0
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhhhccCCchhhhhcccCCCCCcHHHHHHHcCCCCC
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIESLAKDLISTVDGQNISFLHAARSAGHAKK 82 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~~~~~~~~~~~~~~~~~~g~~~~e~~~~~g~~~~ 82 (275)
.|++++|++++.|++.+. ++++|.|+++++||. |+.|++.+.. +. +
T Consensus 132 ~g~a~~l~a~~~l~~~~~-~~~~v~~~~~~~EE~-----g~~Ga~~~~~-----~~--------------------~--- 177 (396)
T 3rza_A 132 AGLAAMLEVLQVIKEQQI-PHGQIQFVITVGEES-----GLIGAKELNS-----EL--------------------L--- 177 (396)
T ss_dssp HHHHHHHHHHHHHHHHTC-CCCCEEEEEESCGGG-----TSHHHHHCCG-----GG--------------------C---
T ss_pred HHHHHHHHHHHHHHhcCC-CCCCEEEEEEccccc-----ccHhHhhhch-----hh--------------------c---
Confidence 588999999999999886 679999999999997 5788887631 10 1
Q ss_pred CCCcchhhccCCCceEEEEeecccccccccCCCceEEEEeeecceEEEEEEEecCCCCCcchhhH---HHHHHHHHHHHH
Q 043727 83 HNDLSSVFLKKGSYSAFVELQIEQGLILEEEGTSIVIVTAIAASASIKVDFEGNEGHAGAVLMPN---SLAAAEVALAVE 159 (275)
Q Consensus 83 ~~~~~~~~~~~~~v~~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~i~i~G~~~Hag~~p~~g---i~aaa~~i~~l~ 159 (275)
++-+.+|++++. ....++.+.+|..+|+|+++|+++|+| .|+.+ +.++++++.+|+
T Consensus 178 --------------~~~~~~~~~~~~------~~g~i~~~~~g~~~~~i~v~G~~~Ha~-~p~~g~nai~~~~~~i~~l~ 236 (396)
T 3rza_A 178 --------------DADFGYAIDASA------DVGTTVVGAPTQMLISAKIIGKTAHAS-TPKEGVSAINIAAKAISRMK 236 (396)
T ss_dssp --------------CCSEEEEEEESS------CTTCEEEEECEEEEEEEEEECBCCBTT-SGGGSBCHHHHHHHHHHHSC
T ss_pred --------------ccceEEEEecCC------CcceEEEcCCceEEEEEEEEeEecCCC-CccccccHHHHHHHHHHhcc
Confidence 111344554431 123467788999999999999999997 89988 999999998876
Q ss_pred HHHHhhCCCCeEEEEEEEEeeCCCCceeCceEEEEEe---CCHhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEecCCCCC
Q 043727 160 KHVLESGSIDTVGTVGILELHSGAINSIPSKSHLEID---IDEKRRKTVIEKIHQSAITIAKNRGVTLSEFKIVNQDPPA 236 (275)
Q Consensus 160 ~~~~~~~~~~~~~tvg~i~~g~~~~NvIP~~a~~~~d---~~~e~~~~~~~~i~~~~~~~~~~~g~~~~~i~~~~~~p~~ 236 (275)
.. +.+ +..++++|.|++| ++.|+||++|++++| ++.+..+.+.++|+++++..+..+|+++ ++++...+||+
T Consensus 237 ~~--~~~-~~~~~~vg~i~gG-~~~NvIP~~a~~~~diR~~~~~~~~~~~~~i~~~~~~~a~~~g~~~-~i~~~~~~p~~ 311 (396)
T 3rza_A 237 LG--QVD-EITTANIGKFHGG-SATNIVADEVILEAEARSHDPERIKTQVKHMTDVFETTASELGGKA-EVTVEQSYPGF 311 (396)
T ss_dssp CE--EEE-TTEEEEEEEEEEC-SCTTBCCCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCEE-EEEEEEEECCE
T ss_pred cC--CCC-CCceeeeeEEecC-CCCcccCceEEEEEEEEeCCHHHHHHHHHHHHHHHHHHHHhcCCEE-EEEEEeccCCc
Confidence 41 122 4678999999985 799999999999999 8889999999999999999998999999 99988888887
Q ss_pred --CCCHHHHHHHHHHHHHhCCCccccCCCCcchHHhhhc
Q 043727 237 --LSDRSIILEAEVALKELNLTYKFMISRAYHDSPFMAR 273 (275)
Q Consensus 237 --~~d~~l~~~~~~~~~~~g~~~~~~~~~~g~Da~~~~~ 273 (275)
.+|+++++.++++++++|.+....++++++|+++|.+
T Consensus 312 ~~~~d~~l~~~~~~~~~~~g~~~~~~~~~g~tD~~~~~~ 350 (396)
T 3rza_A 312 KINDNEAVVKIAQESARNLGLSANTIISGGGSDGSIINT 350 (396)
T ss_dssp ECCTTSHHHHHHHHHHHHTTCCCCEEECSSCCHHHHHGG
T ss_pred ccCCCcHHHHHHHHHHHHcCCCceecccceeccHHHHhh
Confidence 4688999999999999887766677889999999875
No 9
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=99.95 E-value=2.5e-27 Score=216.59 Aligned_cols=220 Identities=14% Similarity=0.159 Sum_probs=161.6
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhhhccCCchhhhhcccCCCCCcHHHHHHHcCCCCC
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIESLAKDLISTVDGQNISFLHAARSAGHAKK 82 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~~~~~~~~~~~~~~~~~~g~~~~e~~~~~g~~~~ 82 (275)
.|++++|++++.|++.+.+++++|.|++++|||+ +.|++.+... |+.
T Consensus 120 ~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EEg------~~G~~~~~~~-------------------------g~~-- 166 (418)
T 1xmb_A 120 GHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEG------LSGAKKMREE-------------------------GAL-- 166 (418)
T ss_dssp HHHHHHHHHHHHHHHTGGGCSSEEEEEEECCTTT------TCHHHHHHHT-------------------------TTT--
T ss_pred HHHHHHHHHHHHHHhccccCCceEEEEEeccccc------cccHHHHHHc-------------------------CCc--
Confidence 4899999999999999988899999999999993 4788876431 110
Q ss_pred CCCcchhhccCCCceEEEEeecccccccccCCC-ceEEEEeeecceEEEEEEEecCCCCCcchhhH---HHHHHHHHHHH
Q 043727 83 HNDLSSVFLKKGSYSAFVELQIEQGLILEEEGT-SIVIVTAIAASASIKVDFEGNEGHAGAVLMPN---SLAAAEVALAV 158 (275)
Q Consensus 83 ~~~~~~~~~~~~~v~~~~~~Hie~g~~le~~~~-~~gvv~~~~G~~~~~i~i~G~~~Hag~~p~~g---i~aaa~~i~~l 158 (275)
.++|+++.+|++++- +.+. .+.+..+++|..+|+|+++|+++|+| .|+.| |.++++++.+|
T Consensus 167 -----------~~~d~~i~~~~~~~~---~~g~~~~~~~~~~~g~~~~~i~v~G~~~Has-~P~~g~nAi~~~a~~i~~l 231 (418)
T 1xmb_A 167 -----------KNVEAIFGIHLSARI---PFGKAASRAGSFLAGAGVFEAVITGKGGHAA-IPQHTIDPVVAASSIVLSL 231 (418)
T ss_dssp -----------TTEEEEEEEEEEEEE---ETTCEEECSEEEECEEEEEEEEEEEC----------CCHHHHHHHHHHHHH
T ss_pred -----------CCCCEEEEEecCCCC---CCceeEeeeccccccceeEEEEEEecCcccC-CCccCCCHHHHHHHHHHHH
Confidence 136789999987652 2222 12344678999999999999999997 79887 99999999999
Q ss_pred HHHHHhh-CC-CCeEEEEEEEEeeCCCCceeCceEEEEEe--CCHhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEecC--
Q 043727 159 EKHVLES-GS-IDTVGTVGILELHSGAINSIPSKSHLEID--IDEKRRKTVIEKIHQSAITIAKNRGVTLSEFKIVNQ-- 232 (275)
Q Consensus 159 ~~~~~~~-~~-~~~~~tvg~i~~g~~~~NvIP~~a~~~~d--~~~e~~~~~~~~i~~~~~~~~~~~g~~~~~i~~~~~-- 232 (275)
+.+..+. ++ ...++|+|.|++| ++.|+||++|++++| ..+ ..+++.++|++++++.+..+|+++ ++++...
T Consensus 232 ~~~~~~~~~~~~~~t~~vg~i~gG-~~~NvIP~~a~~~~diR~~~-~~~~i~~~i~~~~~~~a~~~g~~~-~~~~~~~~~ 308 (418)
T 1xmb_A 232 QQLVSRETDPLDSKVVTVSKVNGG-NAFNVIPDSITIGGTLRAFT-GFTQLQQRVKEVITKQAAVHRCNA-SVNLTPNGR 308 (418)
T ss_dssp HTTCBCCSSGGGCEEEEEEEEC---------CCEEEEEEEEEESS-CHHHHHHHHHHHHHHHHHHTTEEE-EEESSGGGC
T ss_pred HHHHhcccCCCCCcEEEEEEEEec-CcCCcCCCeEEEEEEEccCc-HHHHHHHHHHHHHHHHHHHhCCeE-EEEEccCCc
Confidence 8754221 11 2468999999975 799999999999999 333 899999999999999888899999 9887666
Q ss_pred --CCCCCCCHHHHHHHHHHHHH-hCCCc--cccCCCCcchHHhhhc
Q 043727 233 --DPPALSDRSIILEAEVALKE-LNLTY--KFMISRAYHDSPFMAR 273 (275)
Q Consensus 233 --~p~~~~d~~l~~~~~~~~~~-~g~~~--~~~~~~~g~Da~~~~~ 273 (275)
+|++.+|+++++.+++++++ +|.+. ....+++++|+++|++
T Consensus 309 ~p~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~ 354 (418)
T 1xmb_A 309 EPMPPTVNNKDLYKQFKKVVRDLLGQEAFVEAAPVMGSEDFSYFAE 354 (418)
T ss_dssp CCBCCEEECHHHHHHHHHHHHHHHCGGGEEECCCBCCCCTHHHHHT
T ss_pred ccCCCccCCHHHHHHHHHHHHHhcCCcceeccCCCCCcchHHHHHH
Confidence 77888899999999999998 58653 3466789999999864
No 10
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=99.95 E-value=6.7e-27 Score=212.02 Aligned_cols=215 Identities=15% Similarity=0.125 Sum_probs=171.0
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhhhccCCchhhhhcccCCCCCcHHHHHHHcCCCCC
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIESLAKDLISTVDGQNISFLHAARSAGHAKK 82 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~~~~~~~~~~~~~~~~~~g~~~~e~~~~~g~~~~ 82 (275)
.|++++|++++.|++.+.+++++|.|+++++||. |+.|++.+.... ..
T Consensus 122 ~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~-----g~~G~~~~~~~~----~~----------------------- 169 (393)
T 1cg2_A 122 GGNAVILHTLKLLKEYGVRDYGTITVLFNTDEEK-----GSFGSRDLIQEE----AK----------------------- 169 (393)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSSEEEEEEESCGGG-----TTTTTHHHHHHH----HH-----------------------
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCEEEEEEccccc-----CCccHHHHHHHH----hh-----------------------
Confidence 4799999999999999988888999999999997 467888775311 00
Q ss_pred CCCcchhhccCCCceEEEEeecccccccccCCCceEEEEeeecceEEEEEEEecCCCCCcchhhH---HHHHHHHHHHHH
Q 043727 83 HNDLSSVFLKKGSYSAFVELQIEQGLILEEEGTSIVIVTAIAASASIKVDFEGNEGHAGAVLMPN---SLAAAEVALAVE 159 (275)
Q Consensus 83 ~~~~~~~~~~~~~v~~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~i~i~G~~~Hag~~p~~g---i~aaa~~i~~l~ 159 (275)
+++..+.+| ++.. ....++.+++|..+|+|+++|+++|+|+.|+.+ |.++++++.+|+
T Consensus 170 ------------~~d~~i~~e--~~~~-----~~~~i~~~~~G~~~~~i~v~G~~~Hag~~p~~g~nAi~~~~~~i~~l~ 230 (393)
T 1cg2_A 170 ------------LADYVLSFE--PTSA-----GDEKLSLGTSGIAYVQVNITGKASHAGAAPELGVNALVEASDLVLRTM 230 (393)
T ss_dssp ------------HCSEEEECC--CEET-----TSCEEESEECEEEEEEEEEECBCEETTSCGGGSBCHHHHHHHHHHHHG
T ss_pred ------------cCCEEEEeC--CCCC-----CCCcEEEeeeeeEEEEEEEEeeecccCCCcccCcCHHHHHHHHHHHHH
Confidence 012223222 1110 112567789999999999999999998789988 999999999988
Q ss_pred HHHHhhCCCCeEEEEEEEEeeCCCCceeCceEEEEEe---CCHhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEecCCCCC
Q 043727 160 KHVLESGSIDTVGTVGILELHSGAINSIPSKSHLEID---IDEKRRKTVIEKIHQSAITIAKNRGVTLSEFKIVNQDPPA 236 (275)
Q Consensus 160 ~~~~~~~~~~~~~tvg~i~~g~~~~NvIP~~a~~~~d---~~~e~~~~~~~~i~~~~~~~~~~~g~~~~~i~~~~~~p~~ 236 (275)
.+.... ...++++|.|++| .+.|+||++|++++| ++.+..+.+.++|++++++ +..+++++ ++++...+||+
T Consensus 231 ~~~~~~--~~~~~~v~~i~gG-~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~-~~~~~~~~-~~~~~~~~~~~ 305 (393)
T 1cg2_A 231 NIDDKA--KNLRFNWTIAKAG-NVSNIIPASATLNADVRYARNEDFDAAMKTLEERAQQ-KKLPEADV-KVIVTRGRPAF 305 (393)
T ss_dssp GGCBTT--TTEEEEEEEEEEC-SSTTEECSEEEEEEEEEESSHHHHHHHHHHHHHHHTS-CSSTTCEE-EEEEEECSCCE
T ss_pred hhhCcc--cCceEEEEEEeCC-CCCCEECcccEEEEEEeeCChhhHHHHHHHHHHHHhc-ccCCCcEE-EEEeccccCCc
Confidence 754322 4679999999985 699999999999999 8889999999999998876 33578889 99888888998
Q ss_pred CCC---HHHHHHHHHHHHHhCCCccccC-CCCcchHHhhhc
Q 043727 237 LSD---RSIILEAEVALKELNLTYKFMI-SRAYHDSPFMAR 273 (275)
Q Consensus 237 ~~d---~~l~~~~~~~~~~~g~~~~~~~-~~~g~Da~~~~~ 273 (275)
.++ +++++.++++++.+|.++.... +++++|+++|..
T Consensus 306 ~~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~g~tD~~~~~~ 346 (393)
T 1cg2_A 306 NAGEGGKKLVDKAVAYYKEAGGTLGVEERTGGGTDAAYAAL 346 (393)
T ss_dssp ECHHHHHHHHHHHHHHHHHTTCCCEEESCBSCCCTHHHHGG
T ss_pred cCCcchHHHHHHHHHHHHHhCCCCccccCCCcccHHHHHHh
Confidence 765 6799999999988887766666 789999999875
No 11
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=99.94 E-value=1.8e-25 Score=205.04 Aligned_cols=213 Identities=17% Similarity=0.124 Sum_probs=166.8
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhhhccCCchhhhhcccCCCCCcHHHHHHHcCCCCC
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIESLAKDLISTVDGQNISFLHAARSAGHAKK 82 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~~~~~~~~~~~~~~~~~~g~~~~e~~~~~g~~~~ 82 (275)
.|++++|++++.|++.+.+++++|.|++++|||. ++.|++.+... |+.
T Consensus 147 ~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~-----g~~G~~~~~~~-------------------------~~~-- 194 (433)
T 3pfo_A 147 GGVSAMIFALDAIRTAGYAPDARVHVQTVTEEES-----TGNGALSTLMR-------------------------GYR-- 194 (433)
T ss_dssp HHHHHHHHHHHHHHHTTEEESSCEEEEEESCTTT-----TCHHHHHHHHT-------------------------TCC--
T ss_pred HHHHHHHHHHHHHHHcCCCCCccEEEEEEecCcc-----CChhHHHHHhc-------------------------CCC--
Confidence 4889999999999999988899999999999997 45688765321 111
Q ss_pred CCCcchhhccCCCceEEEEeecccccccccCCCceEEEEeeecceEEEEEEEecCCCCCcchhhH---HHHHHHHHHHHH
Q 043727 83 HNDLSSVFLKKGSYSAFVELQIEQGLILEEEGTSIVIVTAIAASASIKVDFEGNEGHAGAVLMPN---SLAAAEVALAVE 159 (275)
Q Consensus 83 ~~~~~~~~~~~~~v~~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~i~i~G~~~Hag~~p~~g---i~aaa~~i~~l~ 159 (275)
.|+.+- .++.+ ..++.+++|..+|+|+++|+++|+| .|+.+ +.++++++.+|+
T Consensus 195 -------------~d~~i~--------~ep~~--~~i~~~~~G~~~~~i~v~G~~~Ha~-~p~~g~nAi~~~~~~i~~l~ 250 (433)
T 3pfo_A 195 -------------ADACLI--------PEPTG--HTLTRAQVGAVWFRLRVRGTPVHVA-YSETGTSAILSAMHLIRAFE 250 (433)
T ss_dssp -------------CSEEEE--------CCCCS--SCEEEEECEEEEEEEEEECCCCBGG-GGGGSCCHHHHHHHHHHHHH
T ss_pred -------------CCEEEE--------eCCCC--CceEEecceEEEEEEEEEcCCCccC-CCCcCcCHHHHHHHHHHHHH
Confidence 122221 11222 2567889999999999999999997 78887 999999999999
Q ss_pred HHHHhh------CC------CCeEEEEEEEEeeCCCCceeCceEEEEEe---CCHhHHHHHHHHHHHHHHHHHHhc----
Q 043727 160 KHVLES------GS------IDTVGTVGILELHSGAINSIPSKSHLEID---IDEKRRKTVIEKIHQSAITIAKNR---- 220 (275)
Q Consensus 160 ~~~~~~------~~------~~~~~tvg~i~~g~~~~NvIP~~a~~~~d---~~~e~~~~~~~~i~~~~~~~~~~~---- 220 (275)
.+..+. ++ .+.++|+|.|++| ++.|+||++|++.+| ++.+..+++.++|++++++.+..+
T Consensus 251 ~l~~~~~~~~~~~~~~~~~~~~~~~~vg~i~gG-~~~NvIP~~a~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 329 (433)
T 3pfo_A 251 EYTKELNAQAVRDPWFGQVKNPIKFNVGIIKGG-DWASSTAAWCELDCRLGLLTGDTPQEAMRGIEKCLADAQATDSFLS 329 (433)
T ss_dssp HHHHHHHHHGGGCTTTTTSSSCSCEEEEEEEEC-SCTTBCCCEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHhhhccccCccccccCCCceEEeeeEECC-CCCcccCcEEEEEEEEecCCCCCHHHHHHHHHHHHHHHhhhCcccc
Confidence 875432 11 2458999999985 799999999999999 788899999999999999887654
Q ss_pred CCCEEEEEEe-cCCCCCC--CCHHHHHHHHHHHHH-hCCCccccCCCCcchHHhhhc
Q 043727 221 GVTLSEFKIV-NQDPPAL--SDRSIILEAEVALKE-LNLTYKFMISRAYHDSPFMAR 273 (275)
Q Consensus 221 g~~~~~i~~~-~~~p~~~--~d~~l~~~~~~~~~~-~g~~~~~~~~~~g~Da~~~~~ 273 (275)
++++ ++++. ..+||+. +|+++++.+++++++ +|.++...++++++|+++|.+
T Consensus 330 ~~~~-~v~~~~~~~p~~~~~~d~~~~~~~~~a~~~~~G~~~~~~~~~g~~D~~~~~~ 385 (433)
T 3pfo_A 330 ENPA-ELVWSGFQADPAVCEPGGVAEDVLTAAHKAAFNAPLDARLSTAVNDTRYYSV 385 (433)
T ss_dssp HSCC-EEEEEEEEECCEECCTTCHHHHHHHHHHHHHHSSCCCEEEESSCCTHHHHHH
T ss_pred cCCe-EEEEecccCCcccCCCCCHHHHHHHHHHHHHhCCCCceeeeeeeccHHHHHh
Confidence 3556 66654 4567654 467899999999887 687766667889999999975
No 12
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=99.93 E-value=6e-26 Score=208.38 Aligned_cols=210 Identities=17% Similarity=0.076 Sum_probs=166.2
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhhhccCCchhhhhcccCCCCCcHHHHHHHcCCCCC
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIESLAKDLISTVDGQNISFLHAARSAGHAKK 82 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~~~~~~~~~~~~~~~~~~g~~~~e~~~~~g~~~~ 82 (275)
.|++++|++++.|++++.+++++|.|++++|||. | .|++++.. +.+
T Consensus 169 ~gva~~l~a~~~L~~~~~~~~~~i~~if~~~EE~-----g-~Ga~~~~~-----~~~----------------------- 214 (434)
T 3ife_A 169 AGLTEIMVAMNYLIHNPQIKHGKIRVAFTPDEEI-----G-RGPAHFDV-----EAF----------------------- 214 (434)
T ss_dssp HHHHHHHHHHHHHHTCTTSCBCCEEEEEESCGGG-----T-CTGGGCCH-----HHH-----------------------
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEEEECCccc-----C-hHHHHhhh-----hhc-----------------------
Confidence 5899999999999999888899999999999997 3 56765420 111
Q ss_pred CCCcchhhccCCCceEEEEeecccccccccCCCceEEEEeeecceEEEEEEEecCCCCCcchhhH---HHHHHHHHHHHH
Q 043727 83 HNDLSSVFLKKGSYSAFVELQIEQGLILEEEGTSIVIVTAIAASASIKVDFEGNEGHAGAVLMPN---SLAAAEVALAVE 159 (275)
Q Consensus 83 ~~~~~~~~~~~~~v~~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~i~i~G~~~Hag~~p~~g---i~aaa~~i~~l~ 159 (275)
+++..+.+|- ++ ...++.+++|..+|+|+++|+++|+|+.|+.+ |.++++++.+|+
T Consensus 215 ------------~~d~~~~~d~--~~-------~g~i~~~~~G~~~~~i~v~G~~~Hag~~P~~g~nAi~~aa~~i~~l~ 273 (434)
T 3ife_A 215 ------------GASFAYMMDG--GP-------LGGLEYESFNAAGAKLTFNGTNTHPGTAKNKMRNATKLAMEFNGHLP 273 (434)
T ss_dssp ------------CCSEEEECCC--CS-------TTEEECCBCEEEEEEEEEECBCCCGGGCTTTCBCHHHHHHHHHHTSC
T ss_pred ------------CCCEEEEecC--CC-------CCceeecCCCeEEEEEEEEEEecCCCCCcccchhHHHHHHHHHHhcc
Confidence 1234444441 11 11367788999999999999999998789988 999999999887
Q ss_pred HHHHhhCCCCeEEEEEEEEeeCCCCceeCceEEEEEe---CCHhHHHHHHHHHHHHHHHHHHhcC-CCEEEEEEecCCCC
Q 043727 160 KHVLESGSIDTVGTVGILELHSGAINSIPSKSHLEID---IDEKRRKTVIEKIHQSAITIAKNRG-VTLSEFKIVNQDPP 235 (275)
Q Consensus 160 ~~~~~~~~~~~~~tvg~i~~g~~~~NvIP~~a~~~~d---~~~e~~~~~~~~i~~~~~~~~~~~g-~~~~~i~~~~~~p~ 235 (275)
.+. .++..+.++|.++.+ ..|+||++|++++| ++.+..+++.++|++++++++..++ +++ ++++...+++
T Consensus 274 ~~~---~~~~~~~~~g~i~~g--~~n~iP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~~~~g~~~~-~v~~~~~~~~ 347 (434)
T 3ife_A 274 VEE---APEYTEGYEGFYHLL--SLNGDVEQSKAYYIIRDFDRKNFEARKNTIENIVKQMQEKYGQDAV-VLEMNDQYYN 347 (434)
T ss_dssp TTC---SGGGCCTTCCEEEEE--EEEECSSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHCGGGE-EEEEEEEECC
T ss_pred ccc---CCCcceeeeEEEEee--eEeEecCeEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCceE-EEEEeecccc
Confidence 651 112345667788864 68999999999999 8899999999999999999988888 667 6666555554
Q ss_pred ----CCCCHHHHHHHHHHHHHhCCCccccCCCCcchHHhhhc
Q 043727 236 ----ALSDRSIILEAEVALKELNLTYKFMISRAYHDSPFMAR 273 (275)
Q Consensus 236 ----~~~d~~l~~~~~~~~~~~g~~~~~~~~~~g~Da~~~~~ 273 (275)
+.+|+++++.++++++++|.+....++++|||+++|.+
T Consensus 348 ~~~~~~~d~~l~~~~~~a~~~~G~~~~~~~~~ggtD~~~~~~ 389 (434)
T 3ife_A 348 MLEKIEPVREIVDIAYEAMKSLNIEPNIHPIRGGTDGSQLSY 389 (434)
T ss_dssp THHHHGGGTHHHHHHHHHHHHTTCCCEECCBSSCCHHHHHHH
T ss_pred hhccccCCHHHHHHHHHHHHHhCCCCEEeecccCchHHHHhh
Confidence 57789999999999999888766677889999999875
No 13
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=99.92 E-value=3.3e-24 Score=194.31 Aligned_cols=220 Identities=14% Similarity=0.150 Sum_probs=162.7
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhhhccCCchhhhhcccCCCCCcHHHHHHHcCCCCC
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIESLAKDLISTVDGQNISFLHAARSAGHAKK 82 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~~~~~~~~~~~~~~~~~~g~~~~e~~~~~g~~~~ 82 (275)
.|++++|++++.|++.+.+++++|.|++++|||.+ ++.|++.+...+ . ..+.
T Consensus 106 ~~~aa~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~----~~~Ga~~~~~~~-----~----------------~~~~--- 157 (393)
T 1vgy_A 106 TSIACFVTACERFVAKHPNHQGSIALLITSDEEGD----ALDGTTKVVDVL-----K----------------ARDE--- 157 (393)
T ss_dssp HHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSC----CTTSHHHHHHHH-----H----------------HTTC---
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEEEeccccC----CcCCHHHHHHHH-----H----------------hcCc---
Confidence 46889999999999988888999999999999973 457888775311 0 0011
Q ss_pred CCCcchhhccCCCceEEEEeecccccccccCCCceEEEEeeecceEEEEEEEecCCCCCcchhhH---HHHHHHHHHHHH
Q 043727 83 HNDLSSVFLKKGSYSAFVELQIEQGLILEEEGTSIVIVTAIAASASIKVDFEGNEGHAGAVLMPN---SLAAAEVALAVE 159 (275)
Q Consensus 83 ~~~~~~~~~~~~~v~~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~i~i~G~~~Hag~~p~~g---i~aaa~~i~~l~ 159 (275)
.+++.+-.| ++... ..+ . .+..+++|..+|+|+++|+++|+| .|+.+ |.++++++.+|+
T Consensus 158 ------------~~d~~i~~e--~~~~~-~~g-~-~i~~g~~G~~~~~i~v~G~~~Ha~-~P~~g~nAi~~~a~~i~~l~ 219 (393)
T 1vgy_A 158 ------------LIDYCIVGE--PTAVD-KLG-D-MIKNGRRGSLSGNLTVKGKQGHIA-YPHLAINPVHTFAPALLELT 219 (393)
T ss_dssp ------------CEEEEEECC--CCBSS-STT-S-EEECEECEEEEEEEEEECBCEETT-CGGGCBCHHHHHHHHHHHHH
T ss_pred ------------CCCEEEEeC--CCCcc-cCC-c-eeEEeeeeEEEEEEEEEccCcccC-CCccCCCHHHHHHHHHHHhh
Confidence 123333222 11100 011 1 145678999999999999999997 78887 999999999998
Q ss_pred HHHHhhC---CCCeEEEEEEEEeeCCCCceeCceEEEEEe---CCHhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEecC-
Q 043727 160 KHVLESG---SIDTVGTVGILELHSGAINSIPSKSHLEID---IDEKRRKTVIEKIHQSAITIAKNRGVTLSEFKIVNQ- 232 (275)
Q Consensus 160 ~~~~~~~---~~~~~~tvg~i~~g~~~~NvIP~~a~~~~d---~~~e~~~~~~~~i~~~~~~~~~~~g~~~~~i~~~~~- 232 (275)
.+..+.. .++.++++|.|++|+.+.|+||++|++++| ++.+..+++.++|+++++ ..++++ ++++...
T Consensus 220 ~~~~~~~~~~~~~~~~~v~~i~gG~~~~NviP~~a~~~~diR~~~~~~~~~i~~~i~~~~~----~~~~~~-~~~~~~~~ 294 (393)
T 1vgy_A 220 QEVWDEGNEYFPPTSFQISNINGGTGATNVIPGELNVKFNFRFSTESTEAGLKQRVHAILD----KHGVQY-DLQWSCSG 294 (393)
T ss_dssp HCCCCCCCSSCCCCEEEEEEEEECCSCTTEECSEEEEEEEEEECTTSCHHHHHHHHHHHHH----HTTCCE-EEEEEEEE
T ss_pred cccccccccccCCCeEEEeeEcCCCCCCcccCCeEEEEEEEecCCCCCHHHHHHHHHHHHH----HhCCCe-EEEEecCC
Confidence 7532111 134689999999753489999999999999 778889999999988775 357788 7776543
Q ss_pred CCCCCCCHHHHHHHHHHHHHh-CCCccccCCCCcchHHhhhc
Q 043727 233 DPPALSDRSIILEAEVALKEL-NLTYKFMISRAYHDSPFMAR 273 (275)
Q Consensus 233 ~p~~~~d~~l~~~~~~~~~~~-g~~~~~~~~~~g~Da~~~~~ 273 (275)
.|...+|+++++.+++++++. |.+.....+++++|++++.+
T Consensus 295 ~p~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~g~~D~~~~~~ 336 (393)
T 1vgy_A 295 QPFLTQAGKLTDVARAAIAETCGIEAELSTTGGTSDGRFIKA 336 (393)
T ss_dssp CCEECCSSHHHHHHHHHHHHHHSSCCEEECCSCCCTHHHHGG
T ss_pred CcccCCCcHHHHHHHHHHHHHcCCCceEecCCccchHHHHHh
Confidence 344567888999999999885 87766667888999999875
No 14
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=99.92 E-value=9.5e-24 Score=189.79 Aligned_cols=220 Identities=12% Similarity=0.106 Sum_probs=157.9
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhhhccCCchhhhhcccCCCCCcHHHHHHHcCCCCC
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIESLAKDLISTVDGQNISFLHAARSAGHAKK 82 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~~~~~~~~~~~~~~~~~~g~~~~e~~~~~g~~~~ 82 (275)
.|++++|.+++.|++.+.+++++|.|++++|||.+ +..|++.+...+. ..+.
T Consensus 103 ~g~~~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~----~~~G~~~~~~~~~---------------------~~~~--- 154 (377)
T 3isz_A 103 GSLAAMIVAAEEYVKANPNHKGTIALLITSDEEAT----AKDGTIHVVETLM---------------------ARDE--- 154 (377)
T ss_dssp HHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSC----CSSSHHHHHHHHH---------------------HTTC---
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEEEcccccC----ccccHHHHHHHHH---------------------hcCC---
Confidence 47899999999999988888999999999999974 2368887753210 0011
Q ss_pred CCCcchhhccCCCceEEEEeecccccccccCCCceEEEEeeecceEEEEEEEecCCCCCcchhhH---HHHHHHHHHHHH
Q 043727 83 HNDLSSVFLKKGSYSAFVELQIEQGLILEEEGTSIVIVTAIAASASIKVDFEGNEGHAGAVLMPN---SLAAAEVALAVE 159 (275)
Q Consensus 83 ~~~~~~~~~~~~~v~~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~i~i~G~~~Hag~~p~~g---i~aaa~~i~~l~ 159 (275)
++|..+-.|. ... ...+ ..+..+.+|..+++|+++|+++|+| .|+.+ +.++++++.+|+
T Consensus 155 ------------~~d~~~~~e~--~~~-~~~g--~~i~~g~~g~~~~~i~~~G~~~Ha~-~p~~g~nai~~~~~~i~~l~ 216 (377)
T 3isz_A 155 ------------KITYCMVGEP--SSA-KNLG--DVVKNGRRGSITGNLYIQGIQGHVA-YPHLAENPIHKAALFLQELT 216 (377)
T ss_dssp ------------CCCEEEECCC--CBS-SSTT--SEEEEEECEEEEEEEEEECC--------CGGGCHHHHHHHHHHHHH
T ss_pred ------------CCCEEEEcCC--CCc-ccCC--ceEEEEcceEEEEEEEEEccccccC-CCccCcCHHHHHHHHHHHHH
Confidence 1233332231 110 0111 1256788999999999999999997 68887 999999999988
Q ss_pred HHHHhh-C--CCCeEEEEEEEEeeCCCCceeCceEEEEEe---CCHhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEecCC
Q 043727 160 KHVLES-G--SIDTVGTVGILELHSGAINSIPSKSHLEID---IDEKRRKTVIEKIHQSAITIAKNRGVTLSEFKIVNQD 233 (275)
Q Consensus 160 ~~~~~~-~--~~~~~~tvg~i~~g~~~~NvIP~~a~~~~d---~~~e~~~~~~~~i~~~~~~~~~~~g~~~~~i~~~~~~ 233 (275)
.+..+. . .+..+++++.|++|..+.|+||++|++.+| ++.+..+++.++++++++ .+|+++ ++++....
T Consensus 217 ~~~~~~~~~~~~~~~~~v~~i~gg~~~~nvip~~~~~~~diR~~~~~~~~~i~~~i~~~~~----~~g~~~-~i~~~~~~ 291 (377)
T 3isz_A 217 TYQWDKGNEFFPPTSLQIANIHAGTGSNNVIPAELYIQFNLRYCTEVTDEIIKQKVAEMLE----KHNLKY-RIEWNLSG 291 (377)
T ss_dssp HCCCCCCCSSSCCCEEEEEEEEECCSCSSCCCSEEEEEEEEEECTTSCHHHHHHHHHHHHH----HTTCCE-EEEEEECC
T ss_pred hccccccccccCCceeEEEEEECCCCCCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHH----HcCCCe-EEEEEecC
Confidence 753211 1 145799999999864489999999999999 777888888888888765 478999 88876544
Q ss_pred CC-CCCCHHHHHHHHHHHHH-hCCCccccCCCCcchHHhhhc
Q 043727 234 PP-ALSDRSIILEAEVALKE-LNLTYKFMISRAYHDSPFMAR 273 (275)
Q Consensus 234 p~-~~~d~~l~~~~~~~~~~-~g~~~~~~~~~~g~Da~~~~~ 273 (275)
+| ..+|+++++.+++++++ +|.++....++++||++++.+
T Consensus 292 ~p~~~~~~~l~~~l~~a~~~~~g~~~~~~~~~g~tDa~~~~~ 333 (377)
T 3isz_A 292 KPFLTKPGKLLDSITSAIEETIGITPKAETGGGTSDGRFIAL 333 (377)
T ss_dssp CCEECCTTHHHHHHHHHHHHHHSCCCEEEECSSCCSHHHHHT
T ss_pred CCCcCCCCHHHHHHHHHHHHHhCCCCeeeccCcccHHHHHHH
Confidence 44 45678899999999988 688776677889999999875
No 15
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=99.91 E-value=2e-23 Score=194.09 Aligned_cols=225 Identities=12% Similarity=0.058 Sum_probs=166.9
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhhhccCCchhhhhcccCCCCCcHHHHHHHcCCCCC
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIESLAKDLISTVDGQNISFLHAARSAGHAKK 82 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~~~~~~~~~~~~~~~~~~g~~~~e~~~~~g~~~~ 82 (275)
.|++++|.+++.|++.+.+++++|.|+++++||. |+.|++.+..... + ++.
T Consensus 146 ~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~-----g~~g~~~~~~~~~---------~-------------~~~-- 196 (485)
T 3dlj_A 146 GPVLAWINAVSAFRALEQDLPVNIKFIIEGMEEA-----GSVALEELVEKEK---------D-------------RFF-- 196 (485)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSSEEEEEEESCGGG-----TTTTHHHHHHHHT---------T-------------TTS--
T ss_pred HHHHHHHHHHHHHHHhCCCCCccEEEEEEccccc-----CCccHHHHHHhhh---------h-------------hcc--
Confidence 4789999999999999988999999999999997 4678887753110 0 110
Q ss_pred CCCcchhhccCCCceEEEEeecccccccccCCCceEEEEeeecceEEEEEEEecCC--CCCcchhhHHHHHHHHHHHHHH
Q 043727 83 HNDLSSVFLKKGSYSAFVELQIEQGLILEEEGTSIVIVTAIAASASIKVDFEGNEG--HAGAVLMPNSLAAAEVALAVEK 160 (275)
Q Consensus 83 ~~~~~~~~~~~~~v~~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~i~i~G~~~--Hag~~p~~gi~aaa~~i~~l~~ 160 (275)
.++++.+.+|-.. +. . ....++.+++|..+|+|+++|+++ |+|..+...+.+++.++..|+.
T Consensus 197 -----------~~~d~~~~~~~~~---~~-~-~~~~~~~g~~g~~~~~i~v~G~~~~~H~~~~g~~a~~~~~~l~~~l~~ 260 (485)
T 3dlj_A 197 -----------SGVDYIVISDNLW---IS-Q-RKPAITYGTRGNSYFMVEVKCRDQDFHSGTFGGILHEPMADLVALLGS 260 (485)
T ss_dssp -----------TTCCEEEECCCBC---CC----CCEEEEEECEEEEEEEEEESCSSCEETTTSTTSSCCHHHHHHHHHTT
T ss_pred -----------cCCCEEEEcCCCc---cC-C-CCeeEEEeccceEEEEEEEEECCCCCcCCCCCccccCHHHHHHHHHHh
Confidence 1345666666211 00 0 112456789999999999999999 9974222116677777766655
Q ss_pred HHHhh--------------------------CC---------------------------CCeEEEEEEEEee---CCCC
Q 043727 161 HVLES--------------------------GS---------------------------IDTVGTVGILELH---SGAI 184 (275)
Q Consensus 161 ~~~~~--------------------------~~---------------------------~~~~~tvg~i~~g---~~~~ 184 (275)
+..+. .. ...++|||.|++| +++.
T Consensus 261 l~~~~g~i~ipg~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~i~gG~~gp~a~ 340 (485)
T 3dlj_A 261 LVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFLFDTKEEILMHLWRYPSLSIHGIEGAFDEPGTK 340 (485)
T ss_dssp SBCTTSCBCSTTTTTTSCCCCHHHHHHHHTSCCCHHHHHHHHTCSCCSCSSHHHHHHHHHTSCEEEEEEEESSCCSSSCC
T ss_pred hCCCCCCEeCCCcccccCCCCHHHHHHHHhCCCCHHHHHHhcCCCcccccchHHHHHHHhcCCceEEEEEecCCcCCCCC
Confidence 43211 00 1468999999974 2689
Q ss_pred ceeCceEEEEEe---CCHhHHHHHHHHHHHHHHHHHHhcC--CCEEEEEEecCCCCCCCCH--HHHHHHHHHHHH-hCCC
Q 043727 185 NSIPSKSHLEID---IDEKRRKTVIEKIHQSAITIAKNRG--VTLSEFKIVNQDPPALSDR--SIILEAEVALKE-LNLT 256 (275)
Q Consensus 185 NvIP~~a~~~~d---~~~e~~~~~~~~i~~~~~~~~~~~g--~~~~~i~~~~~~p~~~~d~--~l~~~~~~~~~~-~g~~ 256 (275)
||||++|++++| ++.+.++++.++|+++++..+..+| +++ ++++...+||+.+++ ++++.+++++++ +|.+
T Consensus 341 NVIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~~~-~v~~~~~~pp~~~~~d~~~~~~~~~a~~~~~G~~ 419 (485)
T 3dlj_A 341 TVIPGRVIGKFSIRLVPHMNVSAVEKQVTRHLEDVFSKRNSSNKM-VVSMTLGLHPWIANIDDTQYLAAKRAIRTVFGTE 419 (485)
T ss_dssp CEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCSSEE-EEEEEEEECCEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred ceeCCeeEEEEEEEcCCCCCHHHHHHHHHHHHHHhccccCCCeeE-EEEEcCCCCceeCCCCCHHHHHHHHHHHHHhCCC
Confidence 999999999999 8889999999999999999999888 488 888888888887765 899999999988 5876
Q ss_pred ccccCCCCcchH-Hhhhc
Q 043727 257 YKFMISRAYHDS-PFMAR 273 (275)
Q Consensus 257 ~~~~~~~~g~Da-~~~~~ 273 (275)
....++++++|+ ++|.+
T Consensus 420 ~~~~~~ggs~Dfa~~~~~ 437 (485)
T 3dlj_A 420 PDMIRDGSTIPIAKMFQE 437 (485)
T ss_dssp CEEEEESSCCHHHHHHHH
T ss_pred ceecCCCCchhHHHHHHH
Confidence 554567889996 46654
No 16
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=99.90 E-value=8.6e-23 Score=183.51 Aligned_cols=202 Identities=14% Similarity=0.056 Sum_probs=149.4
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhhhccCCchhhhhcccCCCCCcHHHHHHHcCCCCC
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIESLAKDLISTVDGQNISFLHAARSAGHAKK 82 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~~~~~~~~~~~~~~~~~~g~~~~e~~~~~g~~~~ 82 (275)
.|++++|++++. ++++|.|++++|||.+ |+.|++++..... +
T Consensus 109 ~g~a~~l~a~~~-------~~~~v~~~~~~~EE~~----g~~G~~~~~~~~~---------~------------------ 150 (369)
T 2f7v_A 109 GAAAALVAAANA-------GDGDAAFLFSSDEEAN----DPRCIAAFLARGL---------P------------------ 150 (369)
T ss_dssp HHHHHHHHHHTT-------CCCCEEEEEESCTTSS----SCCHHHHHHTTCC---------C------------------
T ss_pred HHHHHHHHHHhc-------CCCCEEEEEEeCcccC----CCcCHHHHHhcCC---------C------------------
Confidence 578888888876 6789999999999962 5789998864210 1
Q ss_pred CCCcchhhccCCCceEEEEeecccccccccCCCceEEEEeeecceEEEEEEEecCCCCCcchh-hH---HHHHHHHHHHH
Q 043727 83 HNDLSSVFLKKGSYSAFVELQIEQGLILEEEGTSIVIVTAIAASASIKVDFEGNEGHAGAVLM-PN---SLAAAEVALAV 158 (275)
Q Consensus 83 ~~~~~~~~~~~~~v~~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~i~i~G~~~Hag~~p~-~g---i~aaa~~i~~l 158 (275)
.|..+- .| +.. ..++.+++|..+|+|+++|+++|+| .|+ .+ |.++++++.+|
T Consensus 151 -------------~d~~i~--~e------~~~--~~i~~~~~g~~~~~i~v~G~~~Ha~-~p~~~g~nAi~~~~~~i~~l 206 (369)
T 2f7v_A 151 -------------YDAVLV--AE------PTM--SEAVLAHRGISSVLMRFAGRAGHAS-GKQDPAASALHQAMRWGGKA 206 (369)
T ss_dssp -------------CSEEEE--CC------CST--TCBBCCBCCEEEEEEEEECCCC-------CTTSCHHHHHHHHHHHH
T ss_pred -------------CCEEEE--CC------CCC--CcceeecCceEEEEEEEeeeCcccC-CCCcCCCCHHHHHHHHHHHH
Confidence 111111 11 111 1345678999999999999999997 788 66 99999999999
Q ss_pred HHHHHhhCC---CC---eEEEEEEEEeeCCCCceeCceEEEEEe---CCHhHHHHHHHHHHHHHHHHHHhcCCCEEEEEE
Q 043727 159 EKHVLESGS---ID---TVGTVGILELHSGAINSIPSKSHLEID---IDEKRRKTVIEKIHQSAITIAKNRGVTLSEFKI 229 (275)
Q Consensus 159 ~~~~~~~~~---~~---~~~tvg~i~~g~~~~NvIP~~a~~~~d---~~~e~~~~~~~~i~~~~~~~~~~~g~~~~~i~~ 229 (275)
+.+..+... ++ .++|+|.|++| .+.|+||++|++++| ++.+..+++.++|+++++. .++++ +++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~vg~i~gG-~~~NviP~~a~~~~diR~~~~~~~~~~~~~i~~~~~~----~~~~~-~~~~ 280 (369)
T 2f7v_A 207 LDHVESLAHARFGGLTGLRFNIGRVDGG-IKANMIAPAAELRFGFRPLPSMDVDGLLATFAGFADP----AAAHF-EETF 280 (369)
T ss_dssp HHHHHHTTTCEETTEESCEEEEEEEEEC-SSTTSCCSEEEEEEEEECCTTCCHHHHHHHHHHTCSS----CCSEE-EEEE
T ss_pred HhhhhhhcccccCcccCCceEEEEeecC-CCCCcCCCceEEEEEEeeCCCCCHHHHHHHHHHHHHH----hcCce-EEEe
Confidence 887654310 11 69999999975 799999999999999 7778899998888887653 35777 7776
Q ss_pred e-cCCCCCCCC-HHHHHHHHHHHHHh-CCCccccCCCCcchHHhhhc
Q 043727 230 V-NQDPPALSD-RSIILEAEVALKEL-NLTYKFMISRAYHDSPFMAR 273 (275)
Q Consensus 230 ~-~~~p~~~~d-~~l~~~~~~~~~~~-g~~~~~~~~~~g~Da~~~~~ 273 (275)
. ..+||+.++ .++++.+++++++. |.+.. ..+++++|+++|.+
T Consensus 281 ~~~~~~~~~~~~~~l~~~~~~a~~~~~g~~~~-~~~~g~~D~~~~~~ 326 (369)
T 2f7v_A 281 RGPSLPSGDIARAEERRLAARDVADALDLPIG-NAVDFWTEASLFSA 326 (369)
T ss_dssp EECCBSCSSHHHHHHHHHHHHHHHHHTTCCBC-CCBSSCCTHHHHHH
T ss_pred ccCCCCccCCCCCHHHHHHHHHHHHhhCCCCC-ccccccCcHHHHhh
Confidence 5 478888888 78999999999875 76544 45778999999875
No 17
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=99.90 E-value=1.7e-23 Score=187.90 Aligned_cols=209 Identities=14% Similarity=0.061 Sum_probs=152.7
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCc--chhhhhhccCCchhhhhcccCCCCCcHHHHHHHcCCC
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISC--LGSLLLAGIESLAKDLISTVDGQNISFLHAARSAGHA 80 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~--~Gs~~~~~~~~~~~~~~~~~~~~g~~~~e~~~~~g~~ 80 (275)
.|++++|++++.|++. .+++++|.|++++|||. ++ .|++.+..... +.
T Consensus 106 ~~~a~~l~a~~~l~~~-~~~~~~v~~~~~~~EE~-----g~~~~G~~~~~~~~~--~~---------------------- 155 (369)
T 3tx8_A 106 SGLAVYLHTFATLATS-TELKHDLTLIAYECEEV-----ADHLNGLGHIRDEHP--EW---------------------- 155 (369)
T ss_dssp HHHHHHHHHHHHHTSC-TTCCSEEEEEEECCCSS-----CTTSCHHHHHHHHCG--GG----------------------
T ss_pred HHHHHHHHHHHHHHhh-cCCCccEEEEEEecccc-----CcccccHHHHHHhcc--cc----------------------
Confidence 4889999999999875 36789999999999997 33 57777643210 00
Q ss_pred CCCCCcchhhccCCCceEEEEeecccccccccCCCceEEEEeeecceEEEEEEEecCCCCCcchhhH---HHHHHHHHHH
Q 043727 81 KKHNDLSSVFLKKGSYSAFVELQIEQGLILEEEGTSIVIVTAIAASASIKVDFEGNEGHAGAVLMPN---SLAAAEVALA 157 (275)
Q Consensus 81 ~~~~~~~~~~~~~~~v~~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~i~i~G~~~Hag~~p~~g---i~aaa~~i~~ 157 (275)
+++-+.+|.|++. ..++.+++|..|++|+++|+++|+| .|+.+ +.++++++.+
T Consensus 156 ---------------~~~~~~i~~ep~~--------~~i~~~~~G~~~~~i~v~G~~~Ha~-~p~~g~nAi~~~a~~i~~ 211 (369)
T 3tx8_A 156 ---------------LAADLALLGEPTG--------GWIEAGCQGNLRIKVTAHGVRAHSA-RSWLGDNAMHKLSPIISK 211 (369)
T ss_dssp ---------------GCCSEEEECCCCT--------TCEEESBCEEEEEEEEEECBCCBTT-SGGGSBCTGGGGHHHHHH
T ss_pred ---------------cCCCEEEEeCCCC--------CceeeecceEEEEEEEEeeeccccC-CCCcCcCHHHHHHHHHHH
Confidence 1112345555431 2466789999999999999999997 68887 9999999999
Q ss_pred HHHHHHhh---CC--CCeEEEEEEEEeeCCCCceeCceEEEEEe---CCHhHHHHHHHHHHHHHHHHHHhcCCCEEEEE-
Q 043727 158 VEKHVLES---GS--IDTVGTVGILELHSGAINSIPSKSHLEID---IDEKRRKTVIEKIHQSAITIAKNRGVTLSEFK- 228 (275)
Q Consensus 158 l~~~~~~~---~~--~~~~~tvg~i~~g~~~~NvIP~~a~~~~d---~~~e~~~~~~~~i~~~~~~~~~~~g~~~~~i~- 228 (275)
|+.+..+. ++ ...++|+|.|++ |.+.|+||++|++++| ++.+..+++.++|++++++.+ .+++++ +++
T Consensus 212 l~~~~~~~~~~~~~~~~~~~~vg~i~g-G~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~-~~g~~~-~~~~ 288 (369)
T 3tx8_A 212 VAAYKAAEVNIDGLTYREGLNIVFCES-GVANNVIPDLAWMNLNFRFAPNRDLNEAIEHVVETLELDG-QDGIEW-AVED 288 (369)
T ss_dssp HHHCCCCEEEETTEEEECEEEEEEEEE-CSBTTBCCSEEEEEEEEEECTTSCHHHHHHHHHHHTTTTT-STTEEE-EEEE
T ss_pred HHhhcccccccCCcccCceEEEEEEEC-CCCCccccCcEEEEEEEecCCCCCHHHHHHHHHHHHHhcc-cCCeEE-EEEe
Confidence 98764321 10 135899999997 4799999999999999 788899999999999988766 678888 774
Q ss_pred EecCCCCCCCCHHHHHHHHHHHHHhCCCccccCCCCcchHHhhhc
Q 043727 229 IVNQDPPALSDRSIILEAEVALKELNLTYKFMISRAYHDSPFMAR 273 (275)
Q Consensus 229 ~~~~~p~~~~d~~l~~~~~~~~~~~g~~~~~~~~~~g~Da~~~~~ 273 (275)
....+++..+++ +++.+.++ +|.. ...+++++||+++|.+
T Consensus 289 ~~~~~~~~~~~~-~~~~~~~~---~g~~-~~~~~~ggtD~~~~~~ 328 (369)
T 3tx8_A 289 GAGGALPGLGQQ-VTSGLIDA---VGRE-KIRAKFGWTDVSRFSA 328 (369)
T ss_dssp EECCBCCCTTSH-HHHHHHHH---HCGG-GEEECCSCCTHHHHHT
T ss_pred cCCCCCCCCCCH-HHHHHHHH---cCCC-CCcccccccchHHHhh
Confidence 333455555554 44444443 4541 2245778999999875
No 18
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=99.89 E-value=4.4e-23 Score=185.13 Aligned_cols=199 Identities=12% Similarity=0.097 Sum_probs=150.0
Q ss_pred hHHHHHHHHHHHHHHcCCCC---CCc--eEEEEccCCCCCCCCCCcchhhhhhccCCchhhhhcccCCCCCcHHHHHHHc
Q 043727 3 KLCLGDIDIINIVIRSGFKP---RRS--LEFIMFTSEEPKRYGISCLGSLLLAGIESLAKDLISTVDGQNISFLHAARSA 77 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~---~~~--i~~~~~~dEE~~~fg~~~~Gs~~~~~~~~~~~~~~~~~~~~g~~~~e~~~~~ 77 (275)
.|++++|++++.|++.+.++ +++ |.|++++|||.+ |+.|++++....
T Consensus 103 ~~~a~~l~a~~~l~~~~~~~~~~~g~~~v~~~~~~~EE~~----g~~G~~~~~~~~------------------------ 154 (364)
T 2rb7_A 103 YAVALGLVMFRDRLNALKAAGRSQKDMALGLLITGDEEIG----GMNGAAKALPLI------------------------ 154 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEEESCGGGT----STTTHHHHGGGC------------------------
T ss_pred HHHHHHHHHHHHHHHhCCCCcccCCCccEEEEEEeccccC----chhhHHHHHhcC------------------------
Confidence 47999999999999988666 457 999999999963 567888764311
Q ss_pred CCCCCCCCcchhhccCCCceEEEEeecccccccccCCCceEEEEeeecceEEEEEEEecCCCCCcchhhH---HHHHHHH
Q 043727 78 GHAKKHNDLSSVFLKKGSYSAFVELQIEQGLILEEEGTSIVIVTAIAASASIKVDFEGNEGHAGAVLMPN---SLAAAEV 154 (275)
Q Consensus 78 g~~~~~~~~~~~~~~~~~v~~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~i~i~G~~~Hag~~p~~g---i~aaa~~ 154 (275)
+.-+.+|++.+ .+.+++.+++|..+|+|+++|+++|+| .|+.+ +.+++++
T Consensus 155 -------------------~~d~~i~~d~~-------~p~~i~~~~~G~~~~~i~v~G~~~Ha~-~P~~g~nAi~~~~~~ 207 (364)
T 2rb7_A 155 -------------------RADYVVALDGG-------NPQQVITKEKGIIDIKLTCTGKAAHGA-RPWMGVNAVDLLMED 207 (364)
T ss_dssp -------------------EEEEEEECSSS-------BTTEEEEEECEEEEEEEEEECBCEETT-SGGGSBCHHHHHHHH
T ss_pred -------------------CCCEEEEccCC-------cccceEEEeeeEEEEEEEEEeecccCC-CCCCCcCHHHHHHHH
Confidence 01134565433 122377889999999999999999997 69888 9999999
Q ss_pred HHHHHHHHHhhCC--CCeEEEEEEEEeeCCCCceeCceEEEEEe---CCHhHHHHHHHHHHHHHHHHHHhcCCCEEEEEE
Q 043727 155 ALAVEKHVLESGS--IDTVGTVGILELHSGAINSIPSKSHLEID---IDEKRRKTVIEKIHQSAITIAKNRGVTLSEFKI 229 (275)
Q Consensus 155 i~~l~~~~~~~~~--~~~~~tvg~i~~g~~~~NvIP~~a~~~~d---~~~e~~~~~~~~i~~~~~~~~~~~g~~~~~i~~ 229 (275)
+.+|+.+...... ...++|+|.|++| ++.|+||++|++++| ++.+..+.+.++|+++++. ++ ++
T Consensus 208 i~~l~~~~~~~~~~~~~~~~~vg~i~gG-~~~NviP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~-------~v-~~-- 276 (364)
T 2rb7_A 208 YTRLKTLFAEENEDHWHRTVNLGRIRAG-ESTNKVPDVAEGWFNIRVTEHDDPGALIDKIRKTVSG-------TV-SI-- 276 (364)
T ss_dssp HHHHHTTSCCCCTTCCSCEEEEEEEEEC-SCTTEECSEEEEEEEEEECTTSCHHHHHHHHHHHCSS-------EE-EE--
T ss_pred HHHHHhhccchhhcCCCceEEEEEEecC-CcCcccCcceEEEEEEeeCCCCCHHHHHHHHHHHhhh-------hE-Ee--
Confidence 9999876320001 2579999999975 799999999999999 7888899999999887643 56 52
Q ss_pred ecCCCCCC--CCHHHHHHHHHHHHHhCCCccccCCCCcchHHhhhc
Q 043727 230 VNQDPPAL--SDRSIILEAEVALKELNLTYKFMISRAYHDSPFMAR 273 (275)
Q Consensus 230 ~~~~p~~~--~d~~l~~~~~~~~~~~g~~~~~~~~~~g~Da~~~~~ 273 (275)
..+||+. .|.++++.++++++..|. ++++++|+++|.+
T Consensus 277 -~~~~~~~~~~~~~l~~~~~~~~~~~g~-----~~~g~~D~~~~~~ 316 (364)
T 2rb7_A 277 -VRTVPVFLAADSPYTERLLALSGATAG-----KAHGASDARYLGE 316 (364)
T ss_dssp -EEEECCEECCCCHHHHHHHHHHCCEEE-----EESSCCGGGGTGG
T ss_pred -ccCCccccCCCCHHHHHHHHHHHhcCC-----CCCCCchHHHHHh
Confidence 2344443 355899998888764442 2678899999975
No 19
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=99.88 E-value=3.3e-22 Score=185.52 Aligned_cols=224 Identities=13% Similarity=0.051 Sum_probs=164.5
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhhhccCCchhhhhcccCCCCCcHHHHHHHcCCCCC
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIESLAKDLISTVDGQNISFLHAARSAGHAKK 82 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~~~~~~~~~~~~~~~~~~g~~~~e~~~~~g~~~~ 82 (275)
.|++++|++++.|++.+.+++++|.|++++|||. |+.|++.+..... . ++.
T Consensus 139 ~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~-----g~~Ga~~~~~~~~--~--------------------~~~-- 189 (479)
T 2zog_A 139 GPVAGWMNALEAYQKTGQEIPVNLRFCLEGMEES-----GSEGLDELIFAQK--D--------------------KFF-- 189 (479)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSSEEEEEEESCGGG-----TCTTHHHHHHHTT--T--------------------TTT--
T ss_pred HHHHHHHHHHHHHHHhCCCCCCcEEEEEeccccc-----CCccHHHHHHhhh--h--------------------hhc--
Confidence 5899999999999999988899999999999997 5689988865321 0 000
Q ss_pred CCCcchhhccCCCceEEEEeecccccccccCCCceEEEEeeecceEEEEEEEecC--CCCCcchhhH-HHHHHHHHHHHH
Q 043727 83 HNDLSSVFLKKGSYSAFVELQIEQGLILEEEGTSIVIVTAIAASASIKVDFEGNE--GHAGAVLMPN-SLAAAEVALAVE 159 (275)
Q Consensus 83 ~~~~~~~~~~~~~v~~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~i~i~G~~--~Hag~~p~~g-i~aaa~~i~~l~ 159 (275)
.++|+.+-+| ++. ++. ....++.+++|..+|+|+++|++ +|+|. |-.. +.++++++..|+
T Consensus 190 -----------~~~d~~i~~e--~~~-~~~--~~~~i~~~~~G~~~~~i~v~G~~~~~Hs~~-~g~~ai~~~~~~i~~l~ 252 (479)
T 2zog_A 190 -----------KDVDYVCISD--NYW-LGK--NKPCITYGLRGICYFFIEVECSDKDLHSGV-YGGSVHEAMTDLISLMG 252 (479)
T ss_dssp -----------TTCCEEEECC--CBC-SSS--SSCEEEEEECEEEEEEEEEECCSSCEEHHH-HTTTSCCHHHHHHHHHT
T ss_pred -----------ccCCEEEEeC--CCc-CCC--CCeEEEEecceEEEEEEEEEeCCCCCccCC-CCCCccCHHHHHHHHHH
Confidence 0123333332 221 111 12357789999999999999999 99964 4222 788888888776
Q ss_pred HHHHhh-------------------------------------CC----------------CCeEEEEEEEEee---CCC
Q 043727 160 KHVLES-------------------------------------GS----------------IDTVGTVGILELH---SGA 183 (275)
Q Consensus 160 ~~~~~~-------------------------------------~~----------------~~~~~tvg~i~~g---~~~ 183 (275)
++..+. +. ...++++|.|++| +++
T Consensus 253 ~l~~~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~i~gg~~g~~~ 332 (479)
T 2zog_A 253 CLVDKKGKILIPGINDAVAPVTDEEHALYDHIDFDMEEFAKDVGAETLLHSCKKDILMHRWRYPSLSLHGIEGAFSGSGA 332 (479)
T ss_dssp TSBCTTSCBCSTTTTTTSCCCCHHHHHHTSSCCCCHHHHHHHHTCSSCSCSSHHHHHHHHHTSCEEEEEEEESSCCSSSC
T ss_pred hcCCCCCCEecCchhccCCCCCHHHHHHHHhCCCCHHHHHHhcCCccccccchHHHHHHhhcCCCeEEeeeecCCcCCCC
Confidence 542210 00 1468999999975 268
Q ss_pred CceeCceEEEEEe---CCHhHHHHHHHHHHHHHHHHHHhc--CCCEEEEEEecCCCCCCC--CHHHHHHHHHHHHHh-CC
Q 043727 184 INSIPSKSHLEID---IDEKRRKTVIEKIHQSAITIAKNR--GVTLSEFKIVNQDPPALS--DRSIILEAEVALKEL-NL 255 (275)
Q Consensus 184 ~NvIP~~a~~~~d---~~~e~~~~~~~~i~~~~~~~~~~~--g~~~~~i~~~~~~p~~~~--d~~l~~~~~~~~~~~-g~ 255 (275)
.|+||++|++++| .+.+..+.+.++|+++++.++..+ ++.+ ++++...+|++.+ |.++++.++++++++ |.
T Consensus 333 ~NvIP~~a~~~~~~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~d~~~~~~~~~a~~~~~g~ 411 (479)
T 2zog_A 333 KTVIPRKVVGKFSIRLVPDMIPEVVSEQVSSYLSKKFAELQSPNKF-KVYMGHGGKPWVSDFNHPHYQAGRRALKTVFGV 411 (479)
T ss_dssp CCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCCSEE-EEEEEEEECCEECCTTSHHHHHHHHHHHHHHSS
T ss_pred ccccCCceEEEEEEEeCCCCCHHHHHHHHHHHHHHhhhccCCCceE-EEEecCCCCceecCCCCHHHHHHHHHHHHHhCC
Confidence 9999999999999 788899999999999999887765 6777 8877667777544 678999999999985 87
Q ss_pred CccccCCCCcchH-Hhhhc
Q 043727 256 TYKFMISRAYHDS-PFMAR 273 (275)
Q Consensus 256 ~~~~~~~~~g~Da-~~~~~ 273 (275)
++....+++++|+ ++|.+
T Consensus 412 ~~~~~~~~gs~d~~~~~~~ 430 (479)
T 2zog_A 412 EPDLTREGGSIPVTLTFQE 430 (479)
T ss_dssp CCEEEEESSCCTHHHHHHH
T ss_pred CceecCCCCccchHHHHHH
Confidence 6555556788998 46653
No 20
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=99.88 E-value=9.6e-22 Score=179.39 Aligned_cols=207 Identities=14% Similarity=0.120 Sum_probs=158.5
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhhhccCCchhhhhcccCCCCCcHHHHHHHcCCCCC
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIESLAKDLISTVDGQNISFLHAARSAGHAKK 82 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~~~~~~~~~~~~~~~~~~g~~~~e~~~~~g~~~~ 82 (275)
.|++++|++++.|++.+ .++++|.|++++|||. | .|++.+.. +.+ .
T Consensus 143 ~g~a~~l~a~~~l~~~~-~~~~~v~~~~~~~EE~-----g-~Ga~~~~~-----~~~--------------------~-- 188 (417)
T 1fno_A 143 AGVAEIMTALAVLKGNP-IPHGDIKVAFTPDEEV-----G-KGAKHFDV-----EAF--------------------G-- 188 (417)
T ss_dssp HHHHHHHHHHHHHHSSS-CCCCCEEEEEESCGGG-----T-CTTTTCCH-----HHH--------------------C--
T ss_pred HhHHHHHHHHHHHHhCC-CCCCcEEEEEEecccc-----C-CChhhhch-----hhc--------------------C--
Confidence 58999999999999998 7889999999999997 4 56665421 111 0
Q ss_pred CCCcchhhccCCCceEEEEeecccccccccCCCceEEEEeeecceEEEEEEEecCCCCCcchhhH---HHHHHHHHHHHH
Q 043727 83 HNDLSSVFLKKGSYSAFVELQIEQGLILEEEGTSIVIVTAIAASASIKVDFEGNEGHAGAVLMPN---SLAAAEVALAVE 159 (275)
Q Consensus 83 ~~~~~~~~~~~~~v~~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~i~i~G~~~Hag~~p~~g---i~aaa~~i~~l~ 159 (275)
.+. .++++.++. + .++.+++|..+|+|+++|+++|+|..|+.+ |.++++++.+|+
T Consensus 189 -------------~d~--~i~~d~~~~----g---~i~~~~~g~~~~~i~~~G~~~Hs~~~p~~g~nAi~~~a~~i~~l~ 246 (417)
T 1fno_A 189 -------------AQW--AYTVDGGGV----G---ELEFENFNAASVNIKIVGNNVHPGTAKGVMVNALSLAARIHAEVP 246 (417)
T ss_dssp -------------CSE--EEECCCCST----T---BEECCBCEEEEEEEEEECBCCCGGGCTTTCBCHHHHHHHHHHTSC
T ss_pred -------------CCE--EEEeCCCCc----C---eeEEecCCceeEEEEEEeeccCCCCCccccCCHHHHHHHHHHhhh
Confidence 111 222222221 1 245678999999999999999997678888 999999999887
Q ss_pred HHHHhhCC--CCeEEEEEEEEeeCCCCceeCceEEEEEe---CCHhHHHHHHHHHHHHHHHHHHhcCCC--EEEEEEecC
Q 043727 160 KHVLESGS--IDTVGTVGILELHSGAINSIPSKSHLEID---IDEKRRKTVIEKIHQSAITIAKNRGVT--LSEFKIVNQ 232 (275)
Q Consensus 160 ~~~~~~~~--~~~~~tvg~i~~g~~~~NvIP~~a~~~~d---~~~e~~~~~~~~i~~~~~~~~~~~g~~--~~~i~~~~~ 232 (275)
.+..+..+ ...++++|.|++| |++|++++| ++.+..+++.++|++++++.+..++.. + ++++...
T Consensus 247 ~~~~~~~~~~~~~~~~v~~i~gG-------p~~a~~~~d~R~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~ 318 (417)
T 1fno_A 247 ADEAPETTEGYEGFYHLASMKGT-------VDRAEMHYIIRDFDRKQFEARKRKMMEIAKKVGKGLHPDCYI-ELVIEDS 318 (417)
T ss_dssp TTSSGGGCCTTCCEEEEEEEEEC-------SSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHTTTCCTTCCE-EEEEEEE
T ss_pred ccCCcccccccccEEEEEEEeec-------cCeEEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHcCCCceE-EEEEecc
Confidence 65322111 2357999999863 999999988 889999999999999999887777754 6 6666555
Q ss_pred CCC----CCCCHHHHHHHHHHHHHhCCCccccCCCCcchHHhhhc
Q 043727 233 DPP----ALSDRSIILEAEVALKELNLTYKFMISRAYHDSPFMAR 273 (275)
Q Consensus 233 ~p~----~~~d~~l~~~~~~~~~~~g~~~~~~~~~~g~Da~~~~~ 273 (275)
+++ +.+|+++++.++++++++|.++....+++++|+++|..
T Consensus 319 ~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~~ggtD~~~~~~ 363 (417)
T 1fno_A 319 YYNMREKVVEHPHILDIAQQAMRDCHITPEMKPIRGGTDGAQLSF 363 (417)
T ss_dssp ECCCHHHHHTSTHHHHHHHHHHHHTTCCCBCCCBSSCCHHHHHTT
T ss_pred ccchhccccCCCHHHHHHHHHHHHcCCCceeccceeccchHhHHh
Confidence 554 35788999999999999888766677889999999875
No 21
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.88 E-value=8.7e-23 Score=182.68 Aligned_cols=195 Identities=12% Similarity=0.044 Sum_probs=145.8
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhhhccCCchhhhhcccCCCCCcHHHHHHHcCCCCC
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIESLAKDLISTVDGQNISFLHAARSAGHAKK 82 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~~~~~~~~~~~~~~~~~~g~~~~e~~~~~g~~~~ 82 (275)
.|++++|++++.|++.+ ++++|.|++++|||.+ |+.|++.+.....
T Consensus 108 ~g~a~~l~a~~~l~~~~--~~~~v~~~~~~~EE~~----g~~G~~~~~~~~~---------------------------- 153 (356)
T 3ct9_A 108 ASVVSLLQVFLQLCRTS--QNYNLIYLASCEEEVS----GKEGIESVLPGLP---------------------------- 153 (356)
T ss_dssp HHHHHHHHHHHHHTTSC--CSSEEEEEEECCGGGT----CTTTHHHHGGGSC----------------------------
T ss_pred HHHHHHHHHHHHHHhcC--CCCCEEEEEEeCcccC----CccCHHHHHhhCC----------------------------
Confidence 37999999999999988 7899999999999962 4678988754210
Q ss_pred CCCcchhhccCCCceEEEEeecccccccccCCCceEEEEeeecceEEEEEEEecCCCCCcchhhH---HHHHHHHHHHHH
Q 043727 83 HNDLSSVFLKKGSYSAFVELQIEQGLILEEEGTSIVIVTAIAASASIKVDFEGNEGHAGAVLMPN---SLAAAEVALAVE 159 (275)
Q Consensus 83 ~~~~~~~~~~~~~v~~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~i~i~G~~~Hag~~p~~g---i~aaa~~i~~l~ 159 (275)
++| +.+|.+++ +. .++.+++|..+|+|+++|+++|+| .| .+ |.++++++.+|+
T Consensus 154 ------------~~d--~~i~~ep~------~~--~i~~~~~G~~~~~i~~~G~~~Ha~-~p-~g~nAi~~~~~~i~~l~ 209 (356)
T 3ct9_A 154 ------------PVS--FAIVGEPT------EM--QPAIAEKGLMVLDVTATGKAGHAA-RD-EGDNAIYKVLNDIAWFR 209 (356)
T ss_dssp ------------CCS--EEEECCSB------TT--CCEEEECCCEEEEEEEECBCCBTT-SS-CCBCTTGGGHHHHHHHH
T ss_pred ------------CCC--EEEEcCCC------Cc--eEEEeeeEEEEEEEEEECCCcccC-CC-CCCCHHHHHHHHHHHHH
Confidence 012 23455443 11 245688999999999999999997 57 66 999999999998
Q ss_pred HHHHhhC-C--CCeEEEEEEEEeeCCCCceeCceEEEEEe---CCHhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEecCC
Q 043727 160 KHVLESG-S--IDTVGTVGILELHSGAINSIPSKSHLEID---IDEKRRKTVIEKIHQSAITIAKNRGVTLSEFKIVNQD 233 (275)
Q Consensus 160 ~~~~~~~-~--~~~~~tvg~i~~g~~~~NvIP~~a~~~~d---~~~e~~~~~~~~i~~~~~~~~~~~g~~~~~i~~~~~~ 233 (275)
.+..+.. + +..++|+|.|++| ++.|+||++|++++| ++.+..+++.++|+++++. ++ +++. ..+
T Consensus 210 ~~~~~~~~~~~~~~~~~vg~i~gG-~~~NviP~~a~~~~~iR~~~~~~~~~~~~~i~~~~~~-------~~-~~~~-~~~ 279 (356)
T 3ct9_A 210 DYRFEKESPLLGPVKMSVTVINAG-TQHNVVPDKCTFVVDIRSNELYSNEDLFAEIRKHIAC-------DA-KARS-FRL 279 (356)
T ss_dssp HCCCSCCBTTTBSCEEEEEEEEEC-SSTTBCCSEEEEEEEEECCTTCCHHHHHHHHHHHCCS-------EE-EESC-SCS
T ss_pred hhhcccccccCCCCcEEeeEEecC-CcCCcCCCceEEEEEEeeCCCCCHHHHHHHHHHHhhC-------eE-EEee-ccC
Confidence 7643211 1 3579999999975 799999999999999 7778899999998887643 56 5553 556
Q ss_pred CCC--CCCHHHHHHHHHHHHHhCCCccccCCCCcchHHhh
Q 043727 234 PPA--LSDRSIILEAEVALKELNLTYKFMISRAYHDSPFM 271 (275)
Q Consensus 234 p~~--~~d~~l~~~~~~~~~~~g~~~~~~~~~~g~Da~~~ 271 (275)
||. .+|+++++.+++++++ ...++++||++.+
T Consensus 280 ~~~~~~~~~~l~~~~~~~~~~------~~~~~g~tD~~~~ 313 (356)
T 3ct9_A 280 NSSRIDEKHPFVQKAVKMGRI------PFGSPTLSDQALM 313 (356)
T ss_dssp CCEECCTTSHHHHHHHHTTCC------CEEECSCCGGGGC
T ss_pred CCCCCCCCCHHHHHHHHHhcC------Ccccccccchhhc
Confidence 664 3567888887766531 2346788999853
No 22
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=99.87 E-value=6.9e-22 Score=183.21 Aligned_cols=220 Identities=13% Similarity=0.047 Sum_probs=160.5
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhhhccCCchhhhhcccCCCCCcHHHHHHHcCCCCC
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIESLAKDLISTVDGQNISFLHAARSAGHAKK 82 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~~~~~~~~~~~~~~~~~~g~~~~e~~~~~g~~~~ 82 (275)
.|++++|.|++.|++.+.++. +|.|++++|||. |+.|++.+..... +.+
T Consensus 133 ~~~a~~l~a~~~l~~~~~~~~-~v~~~~~~~EE~-----g~~g~~~~~~~~~--~~~----------------------- 181 (472)
T 3pfe_A 133 YSAYASLTAIRALEQQGLPYP-RCILIIEACEES-----GSYDLPFYIELLK--ERI----------------------- 181 (472)
T ss_dssp HHHHHHHHHHHHHHHTTCCCE-EEEEEEESCGGG-----TSTTHHHHHHHHH--HHH-----------------------
T ss_pred HHHHHHHHHHHHHHHcCCCCC-cEEEEEEeCCCC-----CChhHHHHHHHhH--hhc-----------------------
Confidence 478999999999999998766 999999999997 4678887753110 000
Q ss_pred CCCcchhhccCCCceEEEEeecccccccccCCCceEEEEeeecceEEE--EEEEecCCCCCcchhh---H-HHHHHHHHH
Q 043727 83 HNDLSSVFLKKGSYSAFVELQIEQGLILEEEGTSIVIVTAIAASASIK--VDFEGNEGHAGAVLMP---N-SLAAAEVAL 156 (275)
Q Consensus 83 ~~~~~~~~~~~~~v~~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~--i~i~G~~~Hag~~p~~---g-i~aaa~~i~ 156 (275)
.++++.+.+|-.. ++.. ...+..+++|..+++ |+++|+++|+| .|.. . |.++++++.
T Consensus 182 -----------~~~d~~~~~~~~~---~~~~--~~~i~~g~~G~~~~~~~v~~~G~~~H~~-~~~~~~~nai~~~~~~i~ 244 (472)
T 3pfe_A 182 -----------GKPSLVICLDSGA---GNYE--QLWMTTSLRGNLVGKLTVELINEGVHSG-SASGIVADSFRVARQLIS 244 (472)
T ss_dssp -----------CCCSEEEEECCBC---SCSS--SCEEEEEECEEEEEEEEEESCSSCBCHH-HHTTTSCCHHHHHHHHHH
T ss_pred -----------cCCCEEEEeCCCc---CCCC--CeeEEEeeeEEEEEEEEEEeCCCCcccC-CCCCCCCCHHHHHHHHHH
Confidence 1245666666211 1111 235778899998877 55589999996 4553 2 999999999
Q ss_pred HHHHHH----------------Hh-----------------h------CC----C---------CeEEEEEEEEee---C
Q 043727 157 AVEKHV----------------LE-----------------S------GS----I---------DTVGTVGILELH---S 181 (275)
Q Consensus 157 ~l~~~~----------------~~-----------------~------~~----~---------~~~~tvg~i~~g---~ 181 (275)
+|+++. .+ . .+ . ..++|||.|++| +
T Consensus 245 ~l~~~~~~~i~i~gf~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~i~~i~gG~~~g 324 (472)
T 3pfe_A 245 RIEDENTGEIKLPQLYCDIPDERIKQAKQCAEILGEQVYSEFPWIDSAKPVIQDKQQLILNRTWRPALTVTGADGFPAIA 324 (472)
T ss_dssp HHBCTTTCCBCCGGGCCCCCHHHHHHHHHHHHHHGGGGTTTSCCCTTCCCSCSCHHHHHHHHHTSCEEEEEEEESCCCTT
T ss_pred HhhCcCCCCEeCCCcccCCCCccHHHHHHHhhhccHHHHHhcccccCccccccchHHHHHHhhcCCcEEEeeeecCcCCC
Confidence 987652 00 0 00 0 468999999985 3
Q ss_pred CCCceeCceEEEEEe---CCHhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEec-CCCCCC---CCHHHHHHHHHHHHH-h
Q 043727 182 GAINSIPSKSHLEID---IDEKRRKTVIEKIHQSAITIAKNRGVTLSEFKIVN-QDPPAL---SDRSIILEAEVALKE-L 253 (275)
Q Consensus 182 ~~~NvIP~~a~~~~d---~~~e~~~~~~~~i~~~~~~~~~~~g~~~~~i~~~~-~~p~~~---~d~~l~~~~~~~~~~-~ 253 (275)
++.||||++|++++| ++.+..+++.++|+++++..+ .+++++ +++... .+||+. +++.+++.+++++++ +
T Consensus 325 ~a~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~-~~g~~v-~v~~~~~~~pp~~~~~n~~~l~~~~~~a~~~~~ 402 (472)
T 3pfe_A 325 DAGNVMRPVTSLKLSMRLPPLVDPEAASVAMEKALTQNP-PYNAKV-DFKIQNGGSKGWNAPLLSDWLAKAASEASMTYY 402 (472)
T ss_dssp TCCSCBCSEEEEEEEEEECTTCCHHHHHHHHHHHHHSSC-GGGCEE-EEEECSCCBCCEECCCCCHHHHHHHHHHHHHHH
T ss_pred CCCCEeCCccEEEEEeecCCCCCHHHHHHHHHHHHHhhC-CCCeEE-EEEecCCCCCcccCCCCChHHHHHHHHHHHHHc
Confidence 689999999999999 888999999999999988765 689999 998877 788865 457788999999987 5
Q ss_pred CCCccccCCCCcch-H-Hhhhc
Q 043727 254 NLTYKFMISRAYHD-S-PFMAR 273 (275)
Q Consensus 254 g~~~~~~~~~~g~D-a-~~~~~ 273 (275)
|.+..... .+|+| + ++|.+
T Consensus 403 G~~~~~~~-~gg~d~f~~~~~~ 423 (472)
T 3pfe_A 403 DKPAAYMG-EGGTIPFMSMLGE 423 (472)
T ss_dssp SSCCEEEE-ESSCCHHHHHHHH
T ss_pred CCCceecc-CCCchhhHHHHHH
Confidence 87554333 45566 4 55643
No 23
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=99.86 E-value=4.8e-21 Score=177.90 Aligned_cols=220 Identities=10% Similarity=0.017 Sum_probs=155.6
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhhhccCCchhhhhcccCCCCCcHHHHHHHcCCCCC
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIESLAKDLISTVDGQNISFLHAARSAGHAKK 82 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~~~~~~~~~~~~~~~~~~g~~~~e~~~~~g~~~~ 82 (275)
.|++++|++++.|++.+.+++++|.|++++|||. |+.|++.+..... +.+ .+.
T Consensus 150 ~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~-----g~~g~~~~~~~~~--~~~---~~~----------------- 202 (481)
T 2pok_A 150 GHITARLSALRKYMQHHDDLPVNISFIMEGAEES-----ASTDLDKYLEKHA--DKL---RGA----------------- 202 (481)
T ss_dssp HHHHHHHHHHHHHHHTCSSCSSEEEEEEESCGGG-----TTTTHHHHHHHHH--HHH---TTC-----------------
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccc-----CchhHHHHHHHhH--hhc---cCC-----------------
Confidence 4899999999999998667889999999999997 5678877643110 001 101
Q ss_pred CCCcchhhccCCCceEEEEeecccccccccCCCceEEEEeeecceEEEEEEEecC--CCCCcchhhH---HHHHHHHHHH
Q 043727 83 HNDLSSVFLKKGSYSAFVELQIEQGLILEEEGTSIVIVTAIAASASIKVDFEGNE--GHAGAVLMPN---SLAAAEVALA 157 (275)
Q Consensus 83 ~~~~~~~~~~~~~v~~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~i~i~G~~--~Hag~~p~~g---i~aaa~~i~~ 157 (275)
++.+.. +++ ... . ....++.+++|..+|+|+++|++ +|+ +.|+.+ |.++++++.+
T Consensus 203 --------------d~~i~~--~~~-~~~-~-~~~~i~~~~~G~~~~~i~v~G~~g~~Hs-s~p~~g~nAi~~~a~~i~~ 262 (481)
T 2pok_A 203 --------------DLLVWE--QGT-KNA-L-EQLEISGGNKGIVTFDAKVKSADVDIHS-SYGGVVESAPWYLLQALQS 262 (481)
T ss_dssp --------------SEEECS--CCB-BCT-T-SCEEEECCBCEEEEEEEEEECSSSCEEG-GGTTTBCCHHHHHHHHHHH
T ss_pred --------------CEEEEC--CCC-ccC-C-CCeeEEEecceeEEEEEEEecCCCCccc-cCCCCCCCHHHHHHHHHHH
Confidence 111111 111 110 1 12457778999999999999999 899 688877 9999999988
Q ss_pred HHHHH-----------------------HhhC-------------------C----------CCeEEEEEEEEeeC---C
Q 043727 158 VEKHV-----------------------LESG-------------------S----------IDTVGTVGILELHS---G 182 (275)
Q Consensus 158 l~~~~-----------------------~~~~-------------------~----------~~~~~tvg~i~~g~---~ 182 (275)
|+.+. .+.. . ...++|+|.|++|. +
T Consensus 263 l~~~~~~i~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~t~~vg~i~gG~~~~~ 342 (481)
T 2pok_A 263 LRAADGRILVEGLYEEVQEPNEREMALLETYGQRNPEEVSRIYGLELPLLQEERMAFLKRFFFDPALNIEGIQSGYQGQG 342 (481)
T ss_dssp TBCTTSCBCCTTTGGGSCCCCHHHHHHHHHHSCSCGGGHHHHHTCCSCCSSCSHHHHHHHHHHSCEEEEEEEEEECCSSS
T ss_pred hhCCCCceeccchhhcCCCCCHHHHHHHHhcCcccHHHHHHhhCcccccccccchhHHHHHhhcCeEeEEeeecCCCCCC
Confidence 76431 1100 0 13699999999862 2
Q ss_pred CCceeCceEEEEEe---CCHhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEecCCCCCC--CCHHHHHHHHHHHHHh-CCC
Q 043727 183 AINSIPSKSHLEID---IDEKRRKTVIEKIHQSAITIAKNRGVTLSEFKIVNQDPPAL--SDRSIILEAEVALKEL-NLT 256 (275)
Q Consensus 183 ~~NvIP~~a~~~~d---~~~e~~~~~~~~i~~~~~~~~~~~g~~~~~i~~~~~~p~~~--~d~~l~~~~~~~~~~~-g~~ 256 (275)
+.|+||++|++++| .+.+..+.+.++|+++++..+. +++++ ++. ..+|++. .|.++++.+++++++. |.+
T Consensus 343 ~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~-~~~~v-~~~--~~~p~~~~~~d~~l~~~~~~a~~~~~g~~ 418 (481)
T 2pok_A 343 VKTILPAEASAKLEVRLVPGLEPHDVLEKIRKQLDKNGF-DKVEL-YYT--LGEMSYRSDMSAPAILNVIELAKKFYPQG 418 (481)
T ss_dssp CCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHTTC-TTEEE-EEE--EEECCBCCCSCSHHHHHHHHHHTTTCTTC
T ss_pred CCeeccCeeEEEEEEEeCCCCCHHHHHHHHHHHHHhhCC-CceEE-EEc--cCCCcccCCCCCHHHHHHHHHHHHHcCCC
Confidence 68999999999999 7888999999999999877543 56555 554 4566654 4788999999999874 765
Q ss_pred c-cccCCCCcchHHhhhc
Q 043727 257 Y-KFMISRAYHDSPFMAR 273 (275)
Q Consensus 257 ~-~~~~~~~g~Da~~~~~ 273 (275)
. ....+++++|+++|.+
T Consensus 419 ~~~~~~~gg~~D~~~~~~ 436 (481)
T 2pok_A 419 VSVLPTTAGTGPMHTVFD 436 (481)
T ss_dssp EEEESCBSSCCTHHHHHH
T ss_pred ccccccCCCCCchHHHHH
Confidence 5 3333445559998864
No 24
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=99.83 E-value=6.9e-19 Score=163.60 Aligned_cols=220 Identities=12% Similarity=0.081 Sum_probs=144.0
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhhhccCCchhhhhcccCCCCCcHHHHHHHcCCCCC
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIESLAKDLISTVDGQNISFLHAARSAGHAKK 82 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~~~~~~~~~~~~~~~~~~g~~~~e~~~~~g~~~~ 82 (275)
+|++++|++++ +.+. ++++|.|+++++||. |+.|++++.... + +.+ +.+..+
T Consensus 119 ~g~a~~l~a~~---~~~~-~~~~v~~~~~~~EE~-----g~~Ga~~~~~~~-----~----~~d----------~~~~~d 170 (487)
T 2qyv_A 119 IGMASALAVLE---SNDI-AHPELEVLLTMTEER-----GMEGAIGLRPNW-----L----RSE----------ILINTD 170 (487)
T ss_dssp HHHHHHHHHHH---CSSS-CCSSEEEEEESCTTT-----TCHHHHTCCSSC-----C----CCS----------EEEECC
T ss_pred HHHHHHHHHHH---hCCC-CCCCEEEEEEecccc-----CCHHHHHHHHhc-----c----CCC----------EEEEEc
Confidence 57888888875 3343 779999999999997 578999876421 1 000 011101
Q ss_pred CCCcchhhccCCCce-EEEEeecccccccccCCCceEEEEeeecceEEEEEEEe-cCCCCCcchhhH----HHHHHHHHH
Q 043727 83 HNDLSSVFLKKGSYS-AFVELQIEQGLILEEEGTSIVIVTAIAASASIKVDFEG-NEGHAGAVLMPN----SLAAAEVAL 156 (275)
Q Consensus 83 ~~~~~~~~~~~~~v~-~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~i~i~G-~~~Hag~~p~~g----i~aaa~~i~ 156 (275)
+ .... ..++. .|.....-..+++++.+++| .+|+|+++| +++|+|.+|+.+ +.++++++.
T Consensus 171 ~----------~~~~~i~~g~---~g~~~~~~~~~~~~~~~~~g-~~~~i~v~G~~~~Hsg~~~~~g~~nAi~~~~~~i~ 236 (487)
T 2qyv_A 171 T----------EENGEIYIGC---AGGENADLELPIEYQVNNFE-HCYQVVLKGLRGGHSGVDIHTGRANAIKVLLRFLA 236 (487)
T ss_dssp C----------CCTTEEEEEE---CEEEEEEEEEECCEEECCCS-EEEEEEEECCCCCBTTTTTTSCCCCHHHHHHHHHH
T ss_pred c----------CCCCeEEEec---cCCcceeeeccccccccCCC-eEEEEEEEccCCccCCcccccCCCCHHHHHHHHHH
Confidence 0 0000 00000 00000000012234456778 999999999 899998666653 999999999
Q ss_pred HHHHHHHhhCCCCeEEEEEEEEeeCCCCceeCceEEEEEe--CCHhHHHHHHHH--------------------------
Q 043727 157 AVEKHVLESGSIDTVGTVGILELHSGAINSIPSKSHLEID--IDEKRRKTVIEK-------------------------- 208 (275)
Q Consensus 157 ~l~~~~~~~~~~~~~~tvg~i~~g~~~~NvIP~~a~~~~d--~~~e~~~~~~~~-------------------------- 208 (275)
+|+.+ . +..++++|.|++| ++.|+||++|++.++ .+.+.++++.++
T Consensus 237 ~l~~~----~-~~~~~~v~~i~gG-~~~NvIP~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (487)
T 2qyv_A 237 ELQQN----Q-PHFDFTLANIRGG-SIRNAIPRESVATLVFNGDITVLQSAVQKFADVIKAELALTEPNLIFTLEKVEKP 310 (487)
T ss_dssp HHHHH----C-TTCCEEEEEEEEE-SCTTBCCCCEEEEEEECSCHHHHHHHHHHHHHHHHHHTTTTCTTCEEEEEECCCC
T ss_pred HHhhc----c-CCCcEEEEEEeCC-CcCcccCCceEEEEEecCCHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecccc
Confidence 98875 2 3568999999986 799999999999877 333344433333
Q ss_pred ---------------HHHH---------------------------------------------------HHHHHHhcCC
Q 043727 209 ---------------IHQS---------------------------------------------------AITIAKNRGV 222 (275)
Q Consensus 209 ---------------i~~~---------------------------------------------------~~~~~~~~g~ 222 (275)
|+++ ++..+..+|+
T Consensus 311 ~r~~~~~~~~~i~~~i~~~~~gv~~~~~~~~~~~~~s~nl~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~g~ 390 (487)
T 2qyv_A 311 QQVFSSQCTKNIIHCLNVLPNGVVRNSDVIENVVETSLSIGVLKTEDNFVRSTMLVRSLIESGKSYVASLLKSLASLAQG 390 (487)
T ss_dssp SEEECHHHHHHHHHHHHHSCCEEEEECSSSTTCEEEEEEEEEEEECSSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHTC
T ss_pred ccccCHHHHHHHHHHHHhCCCcceeeccccCCceEeccceEEEEEcCCeEEEEEEccCCCHHHHHHHHHHHHHHHHHcCc
Confidence 3322 3345566788
Q ss_pred CEEEEEEecCCCCCCC--CHHHHHHHHHHHHH-hCCCccccCCCCcchHHhhhc
Q 043727 223 TLSEFKIVNQDPPALS--DRSIILEAEVALKE-LNLTYKFMISRAYHDSPFMAR 273 (275)
Q Consensus 223 ~~~~i~~~~~~p~~~~--d~~l~~~~~~~~~~-~g~~~~~~~~~~g~Da~~~~~ 273 (275)
++ ++. ..+||+.+ |+++++.+++++++ +|.+.....+++|+|+++|.+
T Consensus 391 ~~-~~~--~~~p~~~~~~d~~l~~~~~~~~~~~~G~~~~~~~~~gg~D~~~~~~ 441 (487)
T 2qyv_A 391 NI-NLS--GDYPGWEPQSHSDILDLTKTIYAQVLGTDPEIKVIHAGLECGLLKK 441 (487)
T ss_dssp EE-EEE--EEECCBCCCSCCHHHHHHHHHHHHHHSSCCEEEEESSCCTHHHHHH
T ss_pred eE-EEC--CCCCCCCCCCCCHHHHHHHHHHHHHhCCCCeEEEEeccccHHHHHh
Confidence 87 765 34676654 77899999999998 587766667889999999875
No 25
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=99.82 E-value=1.3e-19 Score=168.62 Aligned_cols=227 Identities=10% Similarity=0.086 Sum_probs=130.5
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhhhccCCchhhhhcccCCCCCcHHHHHHHcCCCCC
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIESLAKDLISTVDGQNISFLHAARSAGHAKK 82 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~~~~~~~~~~~~~~~~~~g~~~~e~~~~~g~~~~ 82 (275)
.|++++|.|++.|++.+.+++++|.|++++|||. |+.|++++..... +.+ ++|.+|
T Consensus 141 g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~-----g~~g~~~~~~~~~---------~~~----------~~~~~d 196 (492)
T 3khx_A 141 GPTIAAYYAIKILEDMNVDWKKRIHMIIGTDEES-----DWKCTDRYFKTEE---------MPT----------LGFAPD 196 (492)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSSEEEEEEECCTTC-----CCCTTSHHHHHSC---------CCS----------EEECSS
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCEEEEEECCccC-----CCcCHHHHHHhCc---------CCC----------EEEecC
Confidence 4789999999999999988899999999999998 5679998865432 000 122222
Q ss_pred CCCcchhhccCCCceE--E-------------------EEeecccccccccCCCceEEE-------------------Ee
Q 043727 83 HNDLSSVFLKKGSYSA--F-------------------VELQIEQGLILEEEGTSIVIV-------------------TA 122 (275)
Q Consensus 83 ~~~~~~~~~~~~~v~~--~-------------------~~~Hie~g~~le~~~~~~gvv-------------------~~ 122 (275)
.. .+-. ..... . ..+|-.......+... ..++ .+
T Consensus 197 ~~-~p~~----~g~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~n~vpd~~-~aiv~ept~~~~~~~~~~~~~~~~g 270 (492)
T 3khx_A 197 AE-FPCI----HGEKGITTFDLVQNKLTEDQDEPDYELITFKSGERYNMVPDHA-EARVLVKENMTDVIQDFEYFLEQNH 270 (492)
T ss_dssp CS-SCSC----CCBCEEEEEEEEECCCCCCCCCCSEEEEEEEECSCTTSCCCEE-EEEEEECSCHHHHHHHHHHHHHHTT
T ss_pred CC-ccEE----EecCcEEEEEEEEeccccccccccceeEEecccccCCcCCchH-heEeecccchHHHHHHHHHHHhhcC
Confidence 10 0000 00111 1 1112110000000000 0011 13
Q ss_pred eecce-----EEEEEEEecCCCCCcchhhH---HHHHHHHHHHHH------HHHH---hh---------------C--CC
Q 043727 123 IAASA-----SIKVDFEGNEGHAGAVLMPN---SLAAAEVALAVE------KHVL---ES---------------G--SI 168 (275)
Q Consensus 123 ~~G~~-----~~~i~i~G~~~Hag~~p~~g---i~aaa~~i~~l~------~~~~---~~---------------~--~~ 168 (275)
++|.. |++|+++|+++|+| .|+.| |.++++++.+|+ .+.. +. + .+
T Consensus 271 ~kG~~~~~~~~~~i~v~GkaaHas-~P~~G~NAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~d~~~G 349 (492)
T 3khx_A 271 LQGDSTVDSGILVLTVEGKAVHGM-DPSIGVNAGLYLLKFLASLNLDNNAQAFVAFSNRYLFNSDFGEKMGMKFHTDVMG 349 (492)
T ss_dssp CEEEEEEETTEEEEEEECBCCCC-------BCHHHHHHHHHTTSCBCHHHHHHHHHHHHHTTTCTTSGGGTCC-------
T ss_pred ceeEEEecCCeEEEEEEeEEcccC-CCccCccHHHHHHHHHHhcCCCchHHHHHHHHHHhhCCCCCccccCCccccCCcC
Confidence 47777 99999999999997 79988 999999998875 2211 00 1 13
Q ss_pred CeEEEEEEEEeeCCCCceeCceEEEEEe---CCHhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEecCCCCC--CCCHHHH
Q 043727 169 DTVGTVGILELHSGAINSIPSKSHLEID---IDEKRRKTVIEKIHQSAITIAKNRGVTLSEFKIVNQDPPA--LSDRSII 243 (275)
Q Consensus 169 ~~~~tvg~i~~g~~~~NvIP~~a~~~~d---~~~e~~~~~~~~i~~~~~~~~~~~g~~~~~i~~~~~~p~~--~~d~~l~ 243 (275)
.+++|+|.|+++ . |++|++++| .+.+..+++.++|+++++ .+++++ ++.. .+||. ..|.+++
T Consensus 350 ~~t~n~g~i~~g-~-----P~~a~~~idiR~~~~~~~~~v~~~i~~~~~----~~g~~~-~i~~--~~~p~~~~~d~~lv 416 (492)
T 3khx_A 350 DVTTNIGVITYD-N-----ENAGLFGINLRYPEGFEFEKAMDRFANEIQ----QYGFEV-KLGK--VQPPHYVDKNDPFV 416 (492)
T ss_dssp CCEEEEEEEEEE-T-----TTCCEEEEEEEECTTCCHHHHHHHHHHHHG----GGTEEE-EEEE--EECCBCCGGGCHHH
T ss_pred ccEEeeeEEEEe-c-----CCEEEEEEEeeCCCCCCHHHHHHHHHHHHH----HcCCEE-EEec--cCCceecCCCcHHH
Confidence 468889989875 2 999999999 677788888888888764 467777 7654 44544 4467899
Q ss_pred HHHHHHHHHh-CCCccccCCCCcchHHhhhc
Q 043727 244 LEAEVALKEL-NLTYKFMISRAYHDSPFMAR 273 (275)
Q Consensus 244 ~~~~~~~~~~-g~~~~~~~~~~g~Da~~~~~ 273 (275)
+.++++++++ |.+.....++||||+++|.+
T Consensus 417 ~~l~~a~~~~~G~~~~~~~~gggtDa~~~~~ 447 (492)
T 3khx_A 417 QKLVTAYRNQTNDMTEPYTIGGGTYARNLDK 447 (492)
T ss_dssp HHHHHHHHTTCC-------------------
T ss_pred HHHHHHHHHHhCCCCeEEeeehhHHHHHhhC
Confidence 9999999986 87777788999999999864
No 26
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=99.80 E-value=1.6e-18 Score=161.30 Aligned_cols=142 Identities=13% Similarity=0.127 Sum_probs=107.7
Q ss_pred EeeecceEEEEEEEe-cCCCCCcchhhH----HHHHHHHHHHHHHHHHhhCCCCeEEEEEEEEeeCCCCceeCceEEEEE
Q 043727 121 TAIAASASIKVDFEG-NEGHAGAVLMPN----SLAAAEVALAVEKHVLESGSIDTVGTVGILELHSGAINSIPSKSHLEI 195 (275)
Q Consensus 121 ~~~~G~~~~~i~i~G-~~~Hag~~p~~g----i~aaa~~i~~l~~~~~~~~~~~~~~tvg~i~~g~~~~NvIP~~a~~~~ 195 (275)
.+++|..+|+|+++| +++|+|..|+.| |..+++++..|++ ..+++++.|++| ++.|+||++|++.+
T Consensus 200 ~~~~g~~~~~i~v~G~~~gHs~~~p~~g~~nai~~~~~~l~~l~~--------~~~~~v~~i~gG-~~~NvIP~~a~~~~ 270 (490)
T 3mru_A 200 AIPAGFITRQLTLKGLKGGHSGCDIHTGRGNANKLIGRFLAGHAQ--------ELDLRLVEFRGG-SLRNAIPREAFVTV 270 (490)
T ss_dssp CCCTTEEEEEEEEECCCCEETTTSSSSCCCCHHHHHHHHHHHHTT--------TTTCEEEEEEEC-SCTTEECCCEEEEE
T ss_pred ccCCCceEEEEEEECCCCcccccccccCCcCHHHHHHHHHHHHHh--------cCcEEEEEEECC-CCCcccCCccEEEE
Confidence 457899999999999 999998678776 8889998887764 246899999974 79999999999998
Q ss_pred e---CCHhHHHHHHHHHHHHHHHH--------------------------------------------------------
Q 043727 196 D---IDEKRRKTVIEKIHQSAITI-------------------------------------------------------- 216 (275)
Q Consensus 196 d---~~~e~~~~~~~~i~~~~~~~-------------------------------------------------------- 216 (275)
+ .+.+.++++.+++.+.++..
T Consensus 271 ~iR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~l~~~~~G~~~~~~~~~g~v~~S~ 350 (490)
T 3mru_A 271 ALPAENQDKLAELFNYYTELLKTELGKIETDIVTFNEEVATDAQVFAIADQQRFIAALNACPNGVMRMSDEVEGVVETSL 350 (490)
T ss_dssp EEEGGGHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEEECCCCCCEECHHHHHHHHHHHHHSCCEEEEECTTTTSCEEEEE
T ss_pred EECcccHHHHHHHHHHHHHHHHHHhhccCCCeEEEEEecCCccccCCHHHHHHHHHHHHHCCCccceeccccCCCeeEEE
Confidence 8 45555655555555443322
Q ss_pred ------------------------------------HHhcCCCEEEEEEecCCCCCC--CCHHHHHHHHHHHHHh-CCCc
Q 043727 217 ------------------------------------AKNRGVTLSEFKIVNQDPPAL--SDRSIILEAEVALKEL-NLTY 257 (275)
Q Consensus 217 ------------------------------------~~~~g~~~~~i~~~~~~p~~~--~d~~l~~~~~~~~~~~-g~~~ 257 (275)
+..+|+++ ++ ...+||+. .|.++++.++++++++ |.++
T Consensus 351 n~gv~~~~~~~~~~~~~~R~~~~~~~~~i~~~l~~~~~~~g~~~-~~--~~~~p~~~~~~d~~lv~~l~~a~~~~~G~~~ 427 (490)
T 3mru_A 351 NVGVITTEENKVTVLCLIRSLIDSGRSQVEGMLQSVAELAGAQI-EF--SGAYPGWKPDADSEIMAIFRDMYEGIYGHKP 427 (490)
T ss_dssp EEEEEEEETTEEEEEEEEEESSHHHHHHHHHHHHHHHHHTTCEE-EE--EEEECCBCCCTTCHHHHHHHHHHHTTSSSCC
T ss_pred EEEEEEEeCCEEEEEEEcCCCCchHHHHHHHHHHHHHHHcCCeE-Ee--cCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Confidence 22344444 44 34567665 4578999999999987 8877
Q ss_pred cccCCCCcchHHhhhcc
Q 043727 258 KFMISRAYHDSPFMARY 274 (275)
Q Consensus 258 ~~~~~~~g~Da~~~~~~ 274 (275)
....++||+|+++|++.
T Consensus 428 ~~~~~ggg~d~~~~~~~ 444 (490)
T 3mru_A 428 NIMVIHAGLECGLFKEP 444 (490)
T ss_dssp CCEEESSCCHHHHTTSS
T ss_pred eEEEEEecHHHHHHHHh
Confidence 77889999999999864
No 27
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=99.80 E-value=1.1e-19 Score=168.24 Aligned_cols=224 Identities=13% Similarity=0.085 Sum_probs=150.2
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhhhccCCchhhhhcccCCCCCcHHHHHHHcCCCCC
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIESLAKDLISTVDGQNISFLHAARSAGHAKK 82 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~~~~~~~~~~~~~~~~~~g~~~~e~~~~~g~~~~ 82 (275)
.|++++|++++.|++.+.+++++|.|++++|||. |+.|++++..... . .+ +++.+|
T Consensus 122 ~~~a~~l~a~~~l~~~~~~~~~~i~~i~~~~EE~-----g~~G~~~~~~~~~----~---~~------------~~~~~D 177 (470)
T 1lfw_A 122 GPSLTAYYGMLLLKEAGFKPKKKIDFVLGTNEET-----NWVGIDYYLKHEP----T---PD------------IVFSPD 177 (470)
T ss_dssp HHHHHHHHHHHHHHHHTCCCSSEEEEEEESCTTT-----TCHHHHHHHHHSC----C---CS------------EEEESS
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCEEEEEecCccc-----CCccHHHHHHhCc----C---Cc------------EEEEeC
Confidence 4899999999999999988899999999999997 5789998865321 0 00 011111
Q ss_pred C---CCcchhhccCCCceEEEEeecccc----c---ccccCCCceEEEE--------------------------eeecc
Q 043727 83 H---NDLSSVFLKKGSYSAFVELQIEQG----L---ILEEEGTSIVIVT--------------------------AIAAS 126 (275)
Q Consensus 83 ~---~~~~~~~~~~~~v~~~~~~Hie~g----~---~le~~~~~~gvv~--------------------------~~~G~ 126 (275)
. ..+.+ +-..++++|+++- + .....+...+++. +++|.
T Consensus 178 ~~~~~~~ge------~g~~~~~l~~~~~~~~g~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 251 (470)
T 1lfw_A 178 AEYPIINGE------QGIFTLEFSFKNDDTKGDYVLDKFKAGIATNVTPQVTRATISGPDLEAVKLAYESFLADKELDGS 251 (470)
T ss_dssp EESSEEEEE------CEEEEEEEEECCCCCCCSBEEEEEEECSBTTBCCSEEEEEEECSCHHHHHHHHHHHHHHHTCEEE
T ss_pred CCceEEEec------cceEEEEEEEccCCcCCCcceeeeecCCcCCcccccceEEecccchHHHHHHHHHHhhhhccccc
Confidence 0 01111 1124567776542 1 1111111111111 23454
Q ss_pred -----eEEEEEEEecCCCCCcchhhH---HHHHHHHHHHHH------HHH---Hhh------C------C-----CCeEE
Q 043727 127 -----ASIKVDFEGNEGHAGAVLMPN---SLAAAEVALAVE------KHV---LES------G------S-----IDTVG 172 (275)
Q Consensus 127 -----~~~~i~i~G~~~Hag~~p~~g---i~aaa~~i~~l~------~~~---~~~------~------~-----~~~~~ 172 (275)
.+++|+++|+++|++ .|+.+ +.++++++..++ .+. .+. + . ...++
T Consensus 252 ~~~~~~~~~i~v~G~~~Ha~-~P~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~t~ 330 (470)
T 1lfw_A 252 FEINDESADIVLIGQGAHAS-APQVGKNSATFLALFLDQYAFAGRDKNFLHFLAEVEHEDFYGKKLGIFHHDDLMGDLAS 330 (470)
T ss_dssp EEEETTEEEEEEECBCCBTT-CGGGSBCHHHHHHHHHTTSCBCHHHHHHHHHHHHTTTTCTTSTTTTCCCEETTTEECEE
T ss_pred eeecCCcEEEEEeecccCCC-CCccCccHHHHHHHHHHhCCCcchhHHHHHHHHHhcCCCCcccccCCcccccccccceE
Confidence 389999999999996 78887 999999998775 322 111 0 0 12356
Q ss_pred EEEEEEeeCCCCceeCce-EEEEEe---CCHhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEecCCCCCC--CCHHHHHHH
Q 043727 173 TVGILELHSGAINSIPSK-SHLEID---IDEKRRKTVIEKIHQSAITIAKNRGVTLSEFKIVNQDPPAL--SDRSIILEA 246 (275)
Q Consensus 173 tvg~i~~g~~~~NvIP~~-a~~~~d---~~~e~~~~~~~~i~~~~~~~~~~~g~~~~~i~~~~~~p~~~--~d~~l~~~~ 246 (275)
++|.|+ .+|++ |++++| ++.+..+.+.++|+++++. | + ++++...+|++. +|+++++.+
T Consensus 331 ~~g~i~-------~~p~~~a~~~~diR~~~~~~~~~i~~~i~~~~~~-----g--~-~v~~~~~~~~~~~~~d~~l~~~~ 395 (470)
T 1lfw_A 331 SPSMFD-------YEHAGKASLLNNVRYPQGTDPDTMIKQVLDKFSG-----I--L-DVTYNGFEEPHYVPGSDPMVQTL 395 (470)
T ss_dssp EEEEEE-------EETTSCEEEEEEEEECTTCCHHHHHHHHHHHHTT-----T--E-EEECSCCBCCEECCTTCHHHHHH
T ss_pred EEEEEE-------EcCCceEEEEEEEecCCCCCHHHHHHHHHHHhcC-----C--e-EEEEEeCCCceeeCCCCHHHHHH
Confidence 666655 47999 999998 7788899999999888754 4 4 555556677764 578899999
Q ss_pred HHHHHH-hCCCccccCCCCcchHHhhh
Q 043727 247 EVALKE-LNLTYKFMISRAYHDSPFMA 272 (275)
Q Consensus 247 ~~~~~~-~g~~~~~~~~~~g~Da~~~~ 272 (275)
++++++ .|.+.....+++++|++++.
T Consensus 396 ~~a~~~~~g~~~~~~~~~g~~d~~~~~ 422 (470)
T 1lfw_A 396 LKVYEKQTGKPGHEVVIGGGTYGRLFE 422 (470)
T ss_dssp HHHHHHHHCCCCCEEEESSCCGGGGST
T ss_pred HHHHHHHcCCCCceeeecCHhHHHhCC
Confidence 999998 58765556677899999874
No 28
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=97.62 E-value=6.9e-05 Score=60.72 Aligned_cols=45 Identities=13% Similarity=0.211 Sum_probs=39.9
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhhhc
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAG 51 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~~~ 51 (275)
.|++++|++++.|++.+.+++++|.|++++|||.+ ++.|+++++.
T Consensus 116 ~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g----~~~Ga~~~~~ 160 (198)
T 1q7l_A 116 CVSIQYLEAVRRLKVEGHRFPRTIHMTFVPDEEVG----GHQGMELFVQ 160 (198)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSSCEEEEEESCGGGT----STTTHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCEEEEEEcccccC----ccccHHHHHH
Confidence 58999999999999999888999999999999973 3688988764
No 29
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=97.61 E-value=4.4e-05 Score=66.95 Aligned_cols=50 Identities=28% Similarity=0.270 Sum_probs=40.9
Q ss_pred hHHHHHHHHHHHHHHc--------CCCCCCceEEEEccCCCCCCCCC---Ccchhhhhhcc
Q 043727 3 KLCLGDIDIINIVIRS--------GFKPRRSLEFIMFTSEEPKRYGI---SCLGSLLLAGI 52 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~--------~~~~~~~i~~~~~~dEE~~~fg~---~~~Gs~~~~~~ 52 (275)
.|++++|+++|.|++. |.+++++|.|++|.+||..+|-. |+.||++++..
T Consensus 130 sGva~~le~ar~l~~~~~~~~~~~g~~~~~~i~~~~~~~EE~~~~~~~~~gl~Gs~~~~~~ 190 (329)
T 2afw_A 130 VPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHWSPQDSLYGSRHLAAK 190 (329)
T ss_dssp HHHHHHHHHHHHTHHHHHTTC------CCEEEEEEEESCCSCSSSCCSSSSCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHhhhcccccCCCCccEEEEEecCcccccccCCCccchhHHHHHHH
Confidence 6999999999999986 46789999999999999877622 68999999753
No 30
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=97.58 E-value=4.8e-05 Score=65.25 Aligned_cols=46 Identities=22% Similarity=0.337 Sum_probs=41.8
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhhhccC
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIE 53 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~~~~~ 53 (275)
.|++++|++++.|++.+.+++++|.|+++++||. |+.||++++..+
T Consensus 100 ~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~-----g~~Gs~~~~~~~ 145 (284)
T 1tkj_A 100 SGSAAVLETALAVSRAGYQPDKHLRFAWWGAEEL-----GLIGSKFYVNNL 145 (284)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGG-----TSHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhcCCCCCceEEEEEECCccc-----CCcCHHHHHhhC
Confidence 5899999999999999988999999999999997 689999987644
No 31
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=97.57 E-value=5.6e-05 Score=65.29 Aligned_cols=44 Identities=27% Similarity=0.467 Sum_probs=40.9
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhhhc
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAG 51 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~~~ 51 (275)
.|++++|++++.|++.+.+++++|.|+++++||. |+.||++++.
T Consensus 120 ~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~-----g~~Gs~~~~~ 163 (299)
T 1rtq_A 120 SGIAAVTEVIRVLSENNFQPKRSIAFMAYAAEEV-----GLRGSQDLAN 163 (299)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGG-----TSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCCceEEEEEECCccC-----CchhHHHHHH
Confidence 5899999999999999988999999999999998 7899999865
No 32
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=97.44 E-value=0.00014 Score=63.11 Aligned_cols=49 Identities=18% Similarity=0.314 Sum_probs=40.1
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCC--CCCCC------cchhhhhhccC
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPK--RYGIS------CLGSLLLAGIE 53 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~--~fg~~------~~Gs~~~~~~~ 53 (275)
.|++++|+++|.|++.+ ++++|.|++|.+||.+ +|..+ ++||++++...
T Consensus 130 sGva~~Le~ar~l~~~~--~~~~i~f~~~~~EE~Gl~~~~~~~~~ds~~~GS~~~~~~~ 186 (309)
T 3tc8_A 130 SGVGALLEIARQIGQKA--PGIGIDIIFFDAEDYGTPEFVTDYTPDSWCLGTQFWAKNP 186 (309)
T ss_dssp HHHHHHHHHHHHHHHSC--CSSEEEEEEECSCSCSCCTTCCSCCTTCSCHHHHHHHHSC
T ss_pred HhHHHHHHHHHHHHhCC--CCCcEEEEEECccccccccccccccccccchhHHHHHhCC
Confidence 69999999999999985 8899999999999972 33322 39999997643
No 33
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=97.37 E-value=0.00011 Score=64.39 Aligned_cols=48 Identities=19% Similarity=0.188 Sum_probs=41.1
Q ss_pred hHHHHHHHHHHHHHHc-----CCCCCCceEEEEccCCCCCCCC-----CCcchhhhhhcc
Q 043727 3 KLCLGDIDIINIVIRS-----GFKPRRSLEFIMFTSEEPKRYG-----ISCLGSLLLAGI 52 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~-----~~~~~~~i~~~~~~dEE~~~fg-----~~~~Gs~~~~~~ 52 (275)
.|++++|+++|.|++. +.+++++|.|++|.+||. |+ .|++||+++++.
T Consensus 137 sGva~lLe~ar~l~~~~~~~~~~~~~~~i~fv~~~~EE~--f~~w~~~~gl~GS~~~a~~ 194 (330)
T 3pb6_X 137 VPCALLLELAQALDLELSRAKKQAAPVTLQLLFLDGEEA--LKEWGPKDSLYGSRHLAQL 194 (330)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHTTCSEEEEEEEESCCSC--SSCCSTTSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcccCCCCCcEEEEEEcCccc--ccccCCCCCCccHHHHHHH
Confidence 6999999999999884 457899999999999997 43 268999999763
No 34
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=97.36 E-value=0.00011 Score=67.17 Aligned_cols=46 Identities=17% Similarity=0.189 Sum_probs=42.2
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhhhccC
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIE 53 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~~~~~ 53 (275)
.|++++|+++|.|++.+.+|+++|.|++|.+||. |++||++++..+
T Consensus 272 sG~a~~le~a~~l~~~~~~~~~~i~f~~~~~EE~-----gl~Gs~~~~~~~ 317 (444)
T 3iib_A 272 AGVAIVTAAAKHILDLPQKPERTIRVVLYAAEEL-----GLLGGKTYAKEH 317 (444)
T ss_dssp HHHHHHHHHHHHHHTSSSCCSEEEEEEEESCGGG-----TSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcCCCCCCeEEEEEECCccc-----CCcCHHHHHHhh
Confidence 6999999999999999988999999999999998 789999997643
No 35
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=97.35 E-value=0.00019 Score=62.44 Aligned_cols=49 Identities=20% Similarity=0.264 Sum_probs=38.2
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCC--CCCC-------CcchhhhhhccC
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPK--RYGI-------SCLGSLLLAGIE 53 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~--~fg~-------~~~Gs~~~~~~~ 53 (275)
.|++++|+++|.|++.+ ++++|.|++|.+||.+ +|.. .++||++++...
T Consensus 132 sGva~~Le~ar~l~~~~--~~~~i~fv~~~~EE~Gl~~~~~~~~~~ds~~~GS~~~~~~~ 189 (314)
T 3gux_A 132 SGVGVLLEIARQIQKEQ--PALGIDIVFFDSEDYGIPEFYDGKYKQDTWCLGSQYWARTP 189 (314)
T ss_dssp HHHHHHHHHHHHHHHSC--CSSEEEEEEECSCCC-----------CTTSCHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHhCC--CCCcEEEEEECCccccccccccccccccccchhHHHHHhCC
Confidence 69999999999999985 8899999999999972 1111 029999997643
No 36
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=97.09 E-value=0.00059 Score=57.80 Aligned_cols=44 Identities=16% Similarity=0.129 Sum_probs=38.6
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCc-chhhhhhc
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISC-LGSLLLAG 51 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~-~Gs~~~~~ 51 (275)
.|++++|++++.|++.+.+++++|.|++++|||. ++ .||+.+..
T Consensus 106 ~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~-----g~~~Ga~~~~~ 150 (268)
T 3t68_A 106 GSLACMIVAVERFIAEHPDHQGSIGFLITSDEEG-----PFINGTVRVVE 150 (268)
T ss_dssp HHHHHHHHHHHHHHHHCTTCSSEEEEEEESCTTS-----SSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCCcEEEEEEeCCcc-----CcccCHHHHHH
Confidence 5899999999999999888889999999999997 44 59998754
No 37
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=97.07 E-value=0.00061 Score=57.78 Aligned_cols=44 Identities=9% Similarity=0.154 Sum_probs=38.4
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCc-chhhhhhc
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISC-LGSLLLAG 51 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~-~Gs~~~~~ 51 (275)
.|++++|++++.|++.+.+++++|.|++++|||. ++ .||+.+..
T Consensus 106 ~g~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~-----g~~~Ga~~~~~ 150 (269)
T 4h2k_A 106 GSLAAMIVAAEEYVKANPNHKGTIALLITSDEEA-----TAKDGTIHVVE 150 (269)
T ss_dssp HHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSS-----CCTTSHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCccEEEEEEecccc-----CcccCHHHHHH
Confidence 5899999999999999888889999999999997 44 49988754
No 38
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=97.04 E-value=0.00053 Score=62.09 Aligned_cols=45 Identities=24% Similarity=0.301 Sum_probs=39.7
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhhhccCC
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIES 54 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~~~~~~ 54 (275)
.|++++|+++|.|++. +++++|.|++|.+||. |+.||++++..+.
T Consensus 243 ~G~a~~le~~~~l~~~--~~~~~i~~~~~~~EE~-----g~~Gs~~~~~~~~ 287 (421)
T 2ek8_A 243 SGVAVTLELARVMSKL--KTDTELRFITFGAEEN-----GLIGSKKYAASLS 287 (421)
T ss_dssp HHHHHHHHHHHHHTTS--CCSSEEEEEEESSSTT-----TSHHHHHHHTTCC
T ss_pred HhHHHHHHHHHHHhcc--CCCceEEEEEECCccc-----cchhHHHHHHhCc
Confidence 6999999999999884 4789999999999998 7999999987543
No 39
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=97.03 E-value=0.00042 Score=60.13 Aligned_cols=51 Identities=22% Similarity=0.106 Sum_probs=41.4
Q ss_pred hHHHHHHHHHHHHHHc-----CCCCCCceEEEEccCCCCCCCC---CCcchhhhhhccC
Q 043727 3 KLCLGDIDIINIVIRS-----GFKPRRSLEFIMFTSEEPKRYG---ISCLGSLLLAGIE 53 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~-----~~~~~~~i~~~~~~dEE~~~fg---~~~~Gs~~~~~~~ 53 (275)
.|++++||++|.|.+. +.+|+++|.|++|.+||.+.++ .+++||++++.++
T Consensus 106 SGvA~lLElAR~l~~~~~~~~~~~p~~tI~fv~fdaEE~G~~~~~~~~L~GS~~~a~~~ 164 (312)
T 4f9u_A 106 VPCAILLNTAKTLGAYLQKEFRNRSDVGLMLIFFDGEEAFKEWTDADSVYGSKHLAAKL 164 (312)
T ss_dssp HHHHHHHHHHHHTHHHHTTGGGSCSSEEEEEEEESCCSCSSSCSSSSSCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHhhccCCCCceEEEEEecCccccccCCccccccChHHHHHHH
Confidence 6999999999999763 4568999999999999975443 2379999997643
No 40
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=96.86 E-value=0.00065 Score=64.59 Aligned_cols=46 Identities=15% Similarity=0.172 Sum_probs=41.5
Q ss_pred hHHHHHHHHHHHHHHc----CCCCCCceEEEEccCCCCCCCCCCcchhhhhhccC
Q 043727 3 KLCLGDIDIINIVIRS----GFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIE 53 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~----~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~~~~~ 53 (275)
.|++++|+++|.|++. |.+|+++|.|++|.+||. |++||++++...
T Consensus 301 sG~a~lLe~ar~l~~~~~~~g~~p~r~I~f~~~~~EE~-----gl~GS~~~~~~~ 350 (640)
T 3kas_A 301 VGTALLLKLAQMFSDMVLKDGFQPSRSIIFASWSAGDF-----GSVGATEWLEGY 350 (640)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCCCSEEEEEEEESSGGG-----TSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEECCccc-----CchhHHHHHHhh
Confidence 6999999999999974 788999999999999998 799999988754
No 41
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=96.82 E-value=0.00083 Score=64.53 Aligned_cols=46 Identities=26% Similarity=0.286 Sum_probs=41.4
Q ss_pred hHHHHHHHHHHHHHH---cCCCCCCceEEEEccCCCCCCCCCCcchhhhhhccC
Q 043727 3 KLCLGDIDIINIVIR---SGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIE 53 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~---~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~~~~~ 53 (275)
.|++++|+++|.|.+ .|.+|+++|.|++|.+||. |++||++++...
T Consensus 347 sG~a~lLe~ar~l~~~~~~g~~p~r~I~f~~~~~EE~-----Gl~GS~~~~~~~ 395 (707)
T 3fed_A 347 SGVAVLQEIARSFGKLMSKGWRPRRTIIFASWDAEEF-----GLLGSTEWAEEN 395 (707)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGG-----TSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhccCCCCCCEEEEEeCCccc-----cchhHHHHHHhc
Confidence 699999999999986 5788999999999999998 799999998754
No 42
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=96.68 E-value=0.0011 Score=58.09 Aligned_cols=49 Identities=22% Similarity=0.192 Sum_probs=39.5
Q ss_pred hHHHHHHHHHHHHHHc---CCCCCCceEEEEccCCCCCCCCC---Ccchhhhhhc
Q 043727 3 KLCLGDIDIINIVIRS---GFKPRRSLEFIMFTSEEPKRYGI---SCLGSLLLAG 51 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~---~~~~~~~i~~~~~~dEE~~~fg~---~~~Gs~~~~~ 51 (275)
.|++++|+++|.|++. +.+|+++|.|++|.+||.+..+. +++||++++.
T Consensus 132 sG~A~lLE~Ar~l~~~~~~~~~p~rtI~fv~fdgEE~Gl~~~~~~~llGS~~~a~ 186 (330)
T 4fai_A 132 VPCAMLLNLAQVLQEQLKPLKKSKLSLMLLFFDGEEAFEEWGPKDSIYGARHLAK 186 (330)
T ss_dssp HHHHHHHHHHHHTHHHHGGGGTSSEEEEEEEESCCSCSSSCBTTBSCHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHhhhccCCCCccEEEEEeccccccccccccchhhhhHHHHh
Confidence 6999999999999763 56789999999999999743211 2589999975
No 43
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=96.64 E-value=0.0011 Score=58.42 Aligned_cols=42 Identities=12% Similarity=0.059 Sum_probs=34.3
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhh
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLL 49 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~ 49 (275)
.|++++|++++.|++.+.+++++|.++++++||. |+.|++.+
T Consensus 189 ~g~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~-----G~~g~~~~ 230 (349)
T 2gre_A 189 VSVAILLKLIKRLQDENVTLPYTTHFLISNNEEI-----GYGGNSNI 230 (349)
T ss_dssp HHHHHHHHHHHHHHHHTCCCSEEEEEEEESCC---------CCCCCC
T ss_pred HHHHHHHHHHHHHHhccCCCCceEEEEEECcccC-----Cchhhccc
Confidence 5899999999999999988889999999999997 56777765
No 44
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=96.22 E-value=0.0055 Score=52.97 Aligned_cols=48 Identities=19% Similarity=0.277 Sum_probs=37.2
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCC---------Ccchhhhhhcc
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGI---------SCLGSLLLAGI 52 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~---------~~~Gs~~~~~~ 52 (275)
.|++++||++|.|++. +++++|.|++|.+||.+..|. .++||++++..
T Consensus 130 SG~a~lLE~ar~l~~~--~~~~~i~~~~~~~EE~Gl~~~~~~~~~~~~~l~GS~~~~~~ 186 (309)
T 4fuu_A 130 SGVGALLEIARLVNQQ--QPELGIDIIFLDAEDYGTPQFYEGKHKEEAWCLGSQYWSRN 186 (309)
T ss_dssp HHHHHHHHHHHHHHHS--CCSSEEEEEEECSSSCCCCTTCCSCCCGGGSCHHHHHHHHS
T ss_pred hhHHHHHHHHHHHhhc--CCCCceEEEeecccccCccccccchhhhhhhhcchhHHHhc
Confidence 5999999999999986 478999999999999742110 13688877653
No 45
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=96.13 E-value=0.0052 Score=54.54 Aligned_cols=41 Identities=17% Similarity=0.071 Sum_probs=35.9
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhhh
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLA 50 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~~ 50 (275)
.|++++|++++.|++.+ ++++|.|+++++||. |+.|++.+.
T Consensus 187 ~g~a~~l~a~~~l~~~~--~~~~v~~~~~~~EE~-----G~~G~~~~~ 227 (373)
T 1vhe_A 187 IGCAIAIDVLRNLQNTD--HPNIVYGVGTVQEEV-----GLRGAKTAA 227 (373)
T ss_dssp HHHHHHHHHHHHHHTSC--CSSEEEEEEESCCTT-----TSHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcC--CCceEEEEEECCccc-----ChhhHHHHh
Confidence 58999999999999875 568999999999997 678998774
No 46
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=96.08 E-value=0.0028 Score=55.25 Aligned_cols=42 Identities=19% Similarity=0.159 Sum_probs=36.4
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhhhc
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAG 51 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~~~ 51 (275)
.|++++|++++.|++.+ ++++|.++++++||. |+.|++.+..
T Consensus 176 ~g~a~~l~a~~~l~~~~--~~~~i~~~~~~~EE~-----G~~G~~~~~~ 217 (332)
T 2wyr_A 176 FGVVALIEAIKDLVDHE--LEGKVIFAFTVQEEV-----GLKGAKFLAN 217 (332)
T ss_dssp HHHHHHHHHHHTTTTSC--CSSEEEEEEESCGGG-----TSHHHHHHTT
T ss_pred HHHHHHHHHHHHHhhcC--CCceEEEEEECcccc-----CcchHHHHhc
Confidence 48999999999999876 568999999999997 6789988753
No 47
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=95.52 E-value=0.0068 Score=53.30 Aligned_cols=39 Identities=13% Similarity=0.121 Sum_probs=34.2
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhhh
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLA 50 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~~ 50 (275)
.|++++|++++.|++ ++++|.++++++||. |+.|++.+.
T Consensus 185 ~g~a~~l~a~~~l~~----~~~~i~~~~~~~EE~-----g~~G~~~~~ 223 (353)
T 1y0y_A 185 IAVYTILEVAKQLKD----AKADVYFVATVQEEV-----GLRGARTSA 223 (353)
T ss_dssp HHHHHHHHHHHHCCS----CSSEEEEEEESCCTT-----TSHHHHHHH
T ss_pred HHHHHHHHHHHHhhc----CCCeEEEEEECCccc-----chhHHHHHh
Confidence 589999999999876 678999999999997 688998774
No 48
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=94.98 E-value=0.0091 Score=52.18 Aligned_cols=39 Identities=23% Similarity=0.323 Sum_probs=29.6
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhhh
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLA 50 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~~ 50 (275)
.|++++|++++.|+ +++++|.++++++||. |+.|++.+.
T Consensus 170 ~g~a~~l~a~~~l~----~~~~~i~~~~~~~EE~-----G~~G~~~~~ 208 (340)
T 2fvg_A 170 AGCSVLIDVLESGV----SPAYDTYFVFTVQEET-----GLRGSAVVV 208 (340)
T ss_dssp HHHHHHHHHHHTCC----CCSEEEEEEEECCCC----------CHHHH
T ss_pred HHHHHHHHHHHHhh----ccCCcEEEEEEccccc-----chhhhHHHh
Confidence 58999999999987 4778999999999997 578888764
No 49
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=91.66 E-value=0.17 Score=44.03 Aligned_cols=41 Identities=22% Similarity=0.336 Sum_probs=33.9
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhhh
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLA 50 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~~ 50 (275)
.|+++++++++.|++.+ ++.++.++++++||. |+.|++...
T Consensus 175 ~g~aa~l~al~~l~~~~--~~~~~~~~~t~~EEv-----G~~Ga~~~~ 215 (346)
T 1vho_A 175 ASCGVLVKVLEFLKRYD--HPWDVYVVFSVQEET-----GCLGALTGA 215 (346)
T ss_dssp HHHHHHHHHHHHHTTCC--CSSEEEEEEECTTSS-----SHHHHHHTT
T ss_pred HHHHHHHHHHHHhhhcC--CCceEEEEEECCccc-----chhhHHHHh
Confidence 58899999999998765 568999999999998 677777543
No 50
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=91.49 E-value=0.17 Score=43.91 Aligned_cols=40 Identities=13% Similarity=0.077 Sum_probs=33.2
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhh
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLL 49 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~ 49 (275)
.|+++++++++.|++.+ ++.++.++++++||. |+.|++..
T Consensus 172 ~g~aa~l~al~~l~~~~--~~~~~~~~~t~~EEv-----G~~Ga~~~ 211 (348)
T 1ylo_A 172 LSCYLLVTLLRELHDAE--LPAEVWLVASSSEEV-----GLRGGQTA 211 (348)
T ss_dssp HHHHHHHHHHHHHTTCC--CSSEEEEEEESCCTT-----SSHHHHHH
T ss_pred HHHHHHHHHHHHhhhcC--CCceEEEEEEccccc-----chhHHHHh
Confidence 48999999999998765 568999999999997 57777654
No 51
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=90.28 E-value=0.21 Score=34.17 Aligned_cols=33 Identities=21% Similarity=0.165 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHhCCCccccCCCCcchHHhhhc
Q 043727 241 SIILEAEVALKELNLTYKFMISRAYHDSPFMAR 273 (275)
Q Consensus 241 ~l~~~~~~~~~~~g~~~~~~~~~~g~Da~~~~~ 273 (275)
++++.+++++++.|.++....++|+||+++|..
T Consensus 2 ~~v~~l~~a~~~~g~~~~~~~~~g~TDar~~~~ 34 (88)
T 1q7l_B 2 PWWAAFSRVCKDMNLTLEPEIMPAAGDNRYIRA 34 (88)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCSCSHHHHHHH
T ss_pred hHHHHHHHHHHHcCCeeEeeeeceeCcHHHHHH
Confidence 478888999988887777777889999999864
No 52
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=88.96 E-value=0.34 Score=42.55 Aligned_cols=41 Identities=15% Similarity=-0.052 Sum_probs=33.8
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhhh
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLA 50 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~~ 50 (275)
.|++++|++++.|++. +++.++.+++++.||. |+.|++...
T Consensus 185 ~g~~~~l~~l~~l~~~--~~~~~v~~~ft~qEEv-----G~~Ga~~a~ 225 (355)
T 3kl9_A 185 YGVLMVSELAEALSGQ--KLGNELYLGSNVQEEV-----GLRGAHTST 225 (355)
T ss_dssp HHHHHHHHHHHHHSSC--CCSSEEEEEEESCCTT-----TSHHHHHHH
T ss_pred HHHHHHHHHHHHhhhc--CCCceEEEEEECcccc-----CcchhHHHH
Confidence 5889999999999765 4678999999999998 677776543
No 53
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=85.70 E-value=0.48 Score=39.57 Aligned_cols=40 Identities=13% Similarity=0.151 Sum_probs=31.9
Q ss_pred CCCCCCHHHHHHHHHHHHH-hCCCccccCCCCcchHHhhhc
Q 043727 234 PPALSDRSIILEAEVALKE-LNLTYKFMISRAYHDSPFMAR 273 (275)
Q Consensus 234 p~~~~d~~l~~~~~~~~~~-~g~~~~~~~~~~g~Da~~~~~ 273 (275)
|...++..+++.+++++++ +|+++....++|+||++++++
T Consensus 185 p~~~~~~~l~~~l~~a~~~~~gi~~~~~~sgggtD~~~~~~ 225 (268)
T 3t68_A 185 GFLTDTGELLAAVVAAVEEVNHQAPALLTTGGTSDGRFIAQ 225 (268)
T ss_dssp GTSCCCCHHHHHHHHHHHHHHSSCCEEESSCCCHHHHHHHH
T ss_pred cccCCchHHHHHHHHHHHHHhCCCcEEecCccccHHHHHHh
Confidence 4444556799999999998 598877777889999999874
No 54
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=82.92 E-value=0.67 Score=40.61 Aligned_cols=38 Identities=11% Similarity=-0.012 Sum_probs=30.8
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhh
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLL 49 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~ 49 (275)
.|++++|++++.|++ +..++.+++++.||. |+.|++..
T Consensus 188 ~g~~~~l~~l~~l~~----~~~~v~~~ft~qEEV-----G~~ga~~a 225 (354)
T 2vpu_A 188 ICLYAMIEAARQLGD----HEADIYIVGSVQEEV-----GLRGARVA 225 (354)
T ss_dssp HHHHHHHHHHHHCCC----CSSEEEEEECSCCTT-----TSHHHHHH
T ss_pred HHHHHHHHHHHHhhc----CCCeEEEEEECCccc-----Cccchhhh
Confidence 578889999988754 578999999999998 67777644
No 55
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=82.71 E-value=1.3 Score=38.30 Aligned_cols=79 Identities=11% Similarity=0.060 Sum_probs=49.3
Q ss_pred CceeCceEEEEEe--CCHhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEecCCCCCCCCHHHHHHHHHHHHHhCCCccc-c
Q 043727 184 INSIPSKSHLEID--IDEKRRKTVIEKIHQSAITIAKNRGVTLSEFKIVNQDPPALSDRSIILEAEVALKELNLTYKF-M 260 (275)
Q Consensus 184 ~NvIP~~a~~~~d--~~~e~~~~~~~~i~~~~~~~~~~~g~~~~~i~~~~~~p~~~~d~~l~~~~~~~~~~~g~~~~~-~ 260 (275)
.|.++..+.+.+| ...+..+ .. . + .......|+.+ .+. . .+...++.+++.+++++++.|++++. .
T Consensus 212 ~~~i~~~~~i~~D~~~~~~~~~-~~-~-~---~~~~~~~G~~i-~~~--~--~~~~~~~~l~~~~~~~a~~~gi~~~~~~ 280 (348)
T 1ylo_A 212 TRAVSPDVAIVLDTACWAKNFD-YG-A-A---NHRQIGNGPML-VLS--D--KSLIAPPKLTAWIETVAAEIGVPLQADM 280 (348)
T ss_dssp HHHHCCSEEEEECCCCCSSTTC-CS-T-T---CCCCTTSCCEE-EEE--C--SSCBCCHHHHHHHHHHHHHHTCCCEEEE
T ss_pred hcccCCCEEEEEeccccCCCCC-CC-c-c---ccccCCCCcEE-EEe--C--CCCCCCHHHHHHHHHHHHHcCCCeEEee
Confidence 4677777889999 2211111 00 0 0 00111235444 432 2 23457899999999999999998876 6
Q ss_pred CCCCcchHHhhhc
Q 043727 261 ISRAYHDSPFMAR 273 (275)
Q Consensus 261 ~~~~g~Da~~~~~ 273 (275)
.+++|||++++..
T Consensus 281 ~~~ggsDa~~~~~ 293 (348)
T 1ylo_A 281 FSNGGTDGGAVHL 293 (348)
T ss_dssp CSSCCCHHHHHHT
T ss_pred cCCCcchHHHHHH
Confidence 6889999999853
No 56
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=80.81 E-value=1.2 Score=39.09 Aligned_cols=39 Identities=10% Similarity=0.006 Sum_probs=32.9
Q ss_pred CCCCCHHHHHHHHHHHHHhCCCccccCCCCcchHHhhhc
Q 043727 235 PALSDRSIILEAEVALKELNLTYKFMISRAYHDSPFMAR 273 (275)
Q Consensus 235 ~~~~d~~l~~~~~~~~~~~g~~~~~~~~~~g~Da~~~~~ 273 (275)
....|+.+++.++++|++.|++++...+++|||++.+..
T Consensus 263 ~~~~~~~l~~~l~~~a~~~gIp~q~~~~ggGtDa~~i~~ 301 (355)
T 3kl9_A 263 GHLLLPGMKDFLLTTAEEAGIKYQYYCGKGGTDAGAAHL 301 (355)
T ss_dssp TEECCHHHHHHHHHHHHHTTCCEEEEECSSCCTHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEECCCcchHHHHHHH
Confidence 345689999999999999999887766789999998763
No 57
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=79.85 E-value=0.66 Score=39.91 Aligned_cols=33 Identities=6% Similarity=-0.148 Sum_probs=26.6
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhh
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLL 48 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~ 48 (275)
.|+++++++++.|+ .+.++++++||. |+.|++.
T Consensus 168 ~G~aa~l~al~~l~--------~i~~~~t~~EEv-----G~~Ga~~ 200 (321)
T 3cpx_A 168 LGVWTALELAKTLE--------HGIIAFTCWEEH-----GGGSVAY 200 (321)
T ss_dssp HHHHHHHHHTTTCC--------SEEEEEESSTTT-----TCCSHHH
T ss_pred HHHHHHHHHHHHhc--------CcEEEEECCccC-----chhcchh
Confidence 58889999988764 189999999998 5677774
No 58
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=78.34 E-value=1.9 Score=36.98 Aligned_cols=39 Identities=8% Similarity=0.078 Sum_probs=32.5
Q ss_pred CCCCCHHHHHHHHHHHHHhCCCccccCCCCcchHHhhhc
Q 043727 235 PALSDRSIILEAEVALKELNLTYKFMISRAYHDSPFMAR 273 (275)
Q Consensus 235 ~~~~d~~l~~~~~~~~~~~g~~~~~~~~~~g~Da~~~~~ 273 (275)
....++++++.++++++++|.++....++++||+++|..
T Consensus 254 ~~~~~~~l~~~l~~~~~~~gi~~~~~~~~ggtDa~~~~~ 292 (332)
T 2wyr_A 254 SAIYSRDLARKVWSIAEKNGIEIQIGVTGGGTDASAFQD 292 (332)
T ss_dssp SCBCCHHHHHHHHHHHHHTTCCCEEEECSSCCGGGGGTT
T ss_pred CCCCCHHHHHHHHHHHHHcCCCeEEecCCCCchHHHHHc
Confidence 355688999999999999998877777779999998863
No 59
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=77.56 E-value=1.3 Score=38.56 Aligned_cols=37 Identities=14% Similarity=0.133 Sum_probs=28.5
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhh
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLL 49 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~ 49 (275)
.|++++|++++.|+. +.++.+++++-||. |+.|++..
T Consensus 183 ~g~~~~l~~l~~l~~-----~~~~~~~ft~qEEV-----G~~Ga~~a 219 (343)
T 3isx_A 183 IGCAVIVEVFKRIKP-----AVTLYGVFSVQEEV-----GLVGASVA 219 (343)
T ss_dssp HHHHHHHHHHHHCCC-----SSEEEEEEECCCCT-----TSCCSTTT
T ss_pred HHHHHHHHHHHhccC-----CCeEEEEEECCccc-----CchhHHHH
Confidence 578888888887742 57899999999998 56666543
No 60
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=75.60 E-value=1.7 Score=37.53 Aligned_cols=38 Identities=13% Similarity=0.169 Sum_probs=28.2
Q ss_pred CCCCCHHHHHHHHHHHHHhCCCccccCC-C-CcchHHhhh
Q 043727 235 PALSDRSIILEAEVALKELNLTYKFMIS-R-AYHDSPFMA 272 (275)
Q Consensus 235 ~~~~d~~l~~~~~~~~~~~g~~~~~~~~-~-~g~Da~~~~ 272 (275)
++..|+++++.+++++++.|++++...+ + +|||++++.
T Consensus 251 ~~~~~~~l~~~~~~~a~~~gi~~~~~~~~g~ggsDa~~~~ 290 (346)
T 1vho_A 251 GPVVDRNLVQKIIEIAKKHNVSLQEEAVGGRSGTETDFVQ 290 (346)
T ss_dssp STTSCHHHHHHHHHHHHHTTCCCEEESSCCC----CTTHH
T ss_pred CCcCCHHHHHHHHHHHHHCCCCEEEEeCCCCCCchHHHHH
Confidence 4567899999999999999998877655 5 899999884
No 61
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=72.78 E-value=3.4 Score=36.07 Aligned_cols=37 Identities=14% Similarity=0.092 Sum_probs=30.4
Q ss_pred CCCCHHHHHHHHHHHHHhCCCccccC-CC-CcchHHhhh
Q 043727 236 ALSDRSIILEAEVALKELNLTYKFMI-SR-AYHDSPFMA 272 (275)
Q Consensus 236 ~~~d~~l~~~~~~~~~~~g~~~~~~~-~~-~g~Da~~~~ 272 (275)
...|+.+++.++++|++.|++++... ++ +|||++.+.
T Consensus 265 ~~~~~~l~~~l~~~a~~~gIp~q~~~~~g~gGtDa~~i~ 303 (354)
T 2vpu_A 265 PNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQ 303 (354)
T ss_dssp TTSCHHHHHHHHHHHHHTTCCCEEEECCSCCSSTHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCcEEEeCCCCCccHHHHHH
Confidence 35689999999999999999887643 45 799998875
No 62
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=71.79 E-value=2.6 Score=34.97 Aligned_cols=35 Identities=20% Similarity=0.228 Sum_probs=26.7
Q ss_pred CHHHHHHHHHHHHH-hCCCccccCCCCcchHHhhhc
Q 043727 239 DRSIILEAEVALKE-LNLTYKFMISRAYHDSPFMAR 273 (275)
Q Consensus 239 d~~l~~~~~~~~~~-~g~~~~~~~~~~g~Da~~~~~ 273 (275)
+..+++.+.+++++ .|+++....++|+||++++++
T Consensus 190 ~~~l~~~l~~aa~~~~gi~~~~~~~gggtDa~~~~~ 225 (269)
T 4h2k_A 190 PGKLLDSITSAIEETIGITPKAETGGGTSDGRFIAL 225 (269)
T ss_dssp --HHHHHHHHHHHHHHSCCCEEECC--CHHHHHHHT
T ss_pred CcHHHHHHHHHHHHHhCCCCEEecCCCCchHHHHHh
Confidence 35799999999998 798877778889999999864
No 63
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=69.42 E-value=2.7 Score=36.54 Aligned_cols=37 Identities=8% Similarity=0.189 Sum_probs=30.5
Q ss_pred CCCCHHHHHHHHHHHHHhCCCccc-cCCCCcchHHhhh
Q 043727 236 ALSDRSIILEAEVALKELNLTYKF-MISRAYHDSPFMA 272 (275)
Q Consensus 236 ~~~d~~l~~~~~~~~~~~g~~~~~-~~~~~g~Da~~~~ 272 (275)
...|+.+++.++++|++.|++++. ..+++|||++.+.
T Consensus 263 ~~~d~~l~~~l~~~A~~~gIp~Q~~v~~ggGTDa~~i~ 300 (343)
T 3isx_A 263 SISSKRILENLIEIAEKFDIKYQMEVLTFGGTNAMGYQ 300 (343)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCCEECCCBCCCSSHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCeEEecCCCCchHHHHHH
Confidence 345789999999999999999876 4457899998764
No 64
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=66.19 E-value=5.2 Score=35.75 Aligned_cols=38 Identities=16% Similarity=0.110 Sum_probs=31.9
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhhhc
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAG 51 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~~~ 51 (275)
.|++.+++.+|.|++. ++++++.|++++ +.+||.+++.
T Consensus 199 SG~a~lleLar~l~~~--~~~~t~rFvf~p---------g~iGS~~yl~ 236 (435)
T 3k9t_A 199 SGVALITFIAKALSKL--KTKYSYRFLFAP---------ETIGSITWLS 236 (435)
T ss_dssp HHHHHHHHHHHHHTTS--CCSSEEEEEEEC---------TTHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcC--CCCceEEEEEcC---------ccHHHHHHHH
Confidence 6999999999999864 478999999996 2589998864
No 65
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=65.52 E-value=4.4 Score=35.40 Aligned_cols=37 Identities=19% Similarity=0.268 Sum_probs=31.2
Q ss_pred CCCCCHHHHHHHHHHHHHhCCCccc-cCCCCcchHHhh
Q 043727 235 PALSDRSIILEAEVALKELNLTYKF-MISRAYHDSPFM 271 (275)
Q Consensus 235 ~~~~d~~l~~~~~~~~~~~g~~~~~-~~~~~g~Da~~~ 271 (275)
+...++++++.+++++++.|+++.. ..++++||+++|
T Consensus 270 ~~~~~~~l~~~l~~~a~~~gi~~~~~~~~~ggtDa~~~ 307 (373)
T 1vhe_A 270 SMVSHKGLRDAVVATAEEAGIPYQFDAIAGGGTDSGAI 307 (373)
T ss_dssp TEECCHHHHHHHHHHHHHHTCCCEEEEETTCCCTHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCeEEecCCCCCccHHHH
Confidence 3456889999999999999988766 667889999998
No 66
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=64.13 E-value=4.1 Score=34.87 Aligned_cols=66 Identities=9% Similarity=0.201 Sum_probs=44.8
Q ss_pred eeCceEEEEEe--CCHhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEecCCCCCCCCHHHHHHHHHHHHHhCCCcccc-CC
Q 043727 186 SIPSKSHLEID--IDEKRRKTVIEKIHQSAITIAKNRGVTLSEFKIVNQDPPALSDRSIILEAEVALKELNLTYKFM-IS 262 (275)
Q Consensus 186 vIP~~a~~~~d--~~~e~~~~~~~~i~~~~~~~~~~~g~~~~~i~~~~~~p~~~~d~~l~~~~~~~~~~~g~~~~~~-~~ 262 (275)
.++..+.+.+| .... +.....|+.+ ++. . + ...++++++.+++++++.|++++.. ..
T Consensus 208 ~~~~~~~i~~D~~~~~~--------------~~~~~~G~~i-~~~--~-~--~~~~~~l~~~~~~~a~~~gi~~q~~~~~ 267 (321)
T 3cpx_A 208 TFHVKQSLICDITWVTE--------------GVEAGKGVAI-SMR--D-R--MIPRKKYVNRIIELARQTDIPFQLEVEG 267 (321)
T ss_dssp HHCCCEEEECCCEECCS--------------SSCTTSCEEE-EEE--S-S--SCCCHHHHHHHHHHHTTSSCCEEEEECS
T ss_pred ccCCCEEEEEeCccccC--------------CcccCCCcEE-EEC--C-C--CCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 67777888888 2211 1111234444 443 3 2 3467899999999999999987764 47
Q ss_pred CCcchHHhh
Q 043727 263 RAYHDSPFM 271 (275)
Q Consensus 263 ~~g~Da~~~ 271 (275)
++|||++++
T Consensus 268 ~GGsD~~~~ 276 (321)
T 3cpx_A 268 AGASDGREL 276 (321)
T ss_dssp SCCCHHHHH
T ss_pred CCCccHHHH
Confidence 889999988
No 67
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=62.99 E-value=5.3 Score=34.51 Aligned_cols=36 Identities=14% Similarity=0.216 Sum_probs=30.4
Q ss_pred CCCCHHHHHHHHHHHHHhCCCccc-cCCCCcchHHhh
Q 043727 236 ALSDRSIILEAEVALKELNLTYKF-MISRAYHDSPFM 271 (275)
Q Consensus 236 ~~~d~~l~~~~~~~~~~~g~~~~~-~~~~~g~Da~~~ 271 (275)
...++++++.+++++++.|+++.. ..++++||+++|
T Consensus 267 ~~~~~~l~~~l~~~a~~~gi~~~~~~~~~ggsDa~~~ 303 (353)
T 1y0y_A 267 VICHPTIVRWLEELAKKHEIPYQLEILLGGGTDAGAI 303 (353)
T ss_dssp EECCHHHHHHHHHHHHHTTCCEEEEECSSCCCTHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEeecCCCCchHHHH
Confidence 446889999999999999988766 567889999998
No 68
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=56.98 E-value=7.5 Score=33.50 Aligned_cols=35 Identities=11% Similarity=0.008 Sum_probs=23.1
Q ss_pred CCHHHHHHHHHHHHHhCCCccc-cCCCCcchHHhhh
Q 043727 238 SDRSIILEAEVALKELNLTYKF-MISRAYHDSPFMA 272 (275)
Q Consensus 238 ~d~~l~~~~~~~~~~~g~~~~~-~~~~~g~Da~~~~ 272 (275)
.++.+++.+++++++.|+++.. ..+++|||++++.
T Consensus 267 ~~~~l~~~l~~~a~~~gi~~q~~~~~ggGsDa~~~~ 302 (349)
T 2gre_A 267 YHYALRKHLVELAKTNHIEYKVDIYPYYGSDASAAI 302 (349)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECSCC--------
T ss_pred CCHHHHHHHHHHHHHcCCCcEEeccCCCCccHHHHH
Confidence 5789999999999999998766 5678899998874
No 69
>2o8m_C Protease; NS3, NS4A, viral protein; 2.00A {Hepatitis c virus} PDB: 2obq_B 3lon_B* 1n1l_C* 1rtl_C* 2a4g_B* 1a1r_C* 2a4q_B* 2f9u_B* 2f9v_B* 2fm2_B* 2gvf_B* 2obo_B* 2a4r_B* 2oc1_B* 2oc7_B* 2oc8_B* 2xcf_C* 2xcn_C* 2xni_C* 3eyd_B* ...
Probab=47.52 E-value=16 Score=18.63 Aligned_cols=22 Identities=36% Similarity=0.431 Sum_probs=17.3
Q ss_pred CeEEEEEEEEeeCCCCceeCceE
Q 043727 169 DTVGTVGILELHSGAINSIPSKS 191 (275)
Q Consensus 169 ~~~~tvg~i~~g~~~~NvIP~~a 191 (275)
..+.-+|+|..+ +.+-++||+=
T Consensus 3 G~VvIvGri~l~-gkp~v~Pdre 24 (26)
T 2o8m_C 3 GCVVIVGRIVLS-GKPAIIPKKX 24 (26)
T ss_dssp CCBEEEEEEECS-CCCEECCCC-
T ss_pred ceEEEEEEEEEC-CceEEcCCcC
Confidence 356789999985 6999999973
No 70
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=46.57 E-value=9.5 Score=34.51 Aligned_cols=30 Identities=10% Similarity=0.108 Sum_probs=22.9
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCC
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEP 36 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~ 36 (275)
.|+.++|++++.++ .+..++.++++..||.
T Consensus 264 ~~~~~~l~al~~~~----~~~~~~~~~~~d~EEV 293 (461)
T 2glj_A 264 ICAYTSFEAMLEMK----NAKKTCITILVDKEEV 293 (461)
T ss_dssp HHHHHHHHHHHTCC----SCSSCEEEEEECCGGG
T ss_pred HHHHHHHHHHHhhc----cCCCeEEEEEEccCCC
Confidence 46677777766553 4678999999999997
No 71
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=45.99 E-value=13 Score=33.51 Aligned_cols=29 Identities=21% Similarity=0.328 Sum_probs=22.5
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCC
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEP 36 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~ 36 (275)
.|+.++|++++.+ .+...+.++++..||.
T Consensus 252 ~~~~~~l~al~~~-----~~~~~~~~~~~d~EEV 280 (450)
T 2glf_A 252 ICAYTALRALLSA-----NPEKSIGVIFFDKEEI 280 (450)
T ss_dssp HHHHHHHHHHHHC-----CCSSCEEEEEESCGGG
T ss_pred HHHHHHHHHHHhc-----CCCceEEEEEEccccc
Confidence 4667777777665 3567899999999996
No 72
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=40.18 E-value=6 Score=35.82 Aligned_cols=31 Identities=13% Similarity=0.155 Sum_probs=24.0
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCC
Q 043727 3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEP 36 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~ 36 (275)
.|+.++|++++.+++ .++.++.++++..||.
T Consensus 258 ~~~~~~l~al~~~~~---~~~~~~~~~~~d~EEV 288 (458)
T 1y7e_A 258 ICVFTSLESIFDLEE---TPNKTAICFLVDKEEI 288 (458)
T ss_dssp HHHHHHHHHHSSSSC---CCSSCEECCCBCSTTC
T ss_pred HHHHHHHHHHHhhhc---cCCceEEEEEEccccc
Confidence 467777787776543 4678899999999997
No 73
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=37.84 E-value=22 Score=30.31 Aligned_cols=36 Identities=14% Similarity=0.121 Sum_probs=20.2
Q ss_pred CCHHHHHHHHHHHHHhCCCccc-cCCCCcchHHhhhc
Q 043727 238 SDRSIILEAEVALKELNLTYKF-MISRAYHDSPFMAR 273 (275)
Q Consensus 238 ~d~~l~~~~~~~~~~~g~~~~~-~~~~~g~Da~~~~~ 273 (275)
.++.+.+.+++++++.|+++.. ..++++||+++|..
T Consensus 254 ~~~~l~~~l~~~a~~~gi~~~~~~~~~ggtDa~~~~~ 290 (340)
T 2fvg_A 254 IPKEIFQTIVDTAKNNDIPFQMKRRTAGGTDAGRYAR 290 (340)
T ss_dssp CCHHHHHHHHHHHHHTTCCCEECCCC-----------
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEecCCCCccHHHHHh
Confidence 4678999999999999988765 36788999998864
No 74
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=32.75 E-value=52 Score=26.77 Aligned_cols=33 Identities=6% Similarity=0.142 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHcCCCCCCceEEEEccCCCCCC
Q 043727 6 LGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKR 38 (275)
Q Consensus 6 ~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~ 38 (275)
..++.++++|++.|++.+.+|.|+++-|-+.+.
T Consensus 197 ~~A~g~~~al~~~G~~vP~di~vig~D~~~~~~ 229 (294)
T 3qk7_A 197 MLGDGVASALDKAGLLGGEGISLIAYDGLPDDS 229 (294)
T ss_dssp HHHHHHHHHHHHTTCSSTTSCEEEEETCSCTTC
T ss_pred HHHHHHHHHHHHcCCCCCCceEEEeecCccHHh
Confidence 457889999999999888999999998887644
No 75
>2d16_A Hypothetical protein PH1918; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.65A {Pyrococcus horikoshii}
Probab=31.62 E-value=61 Score=24.41 Aligned_cols=63 Identities=10% Similarity=0.137 Sum_probs=40.9
Q ss_pred CCCCceeCceEEEEEeCCHhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEecCCCCC----CCCHHHHHHHHHHHHHhC
Q 043727 181 SGAINSIPSKSHLEIDIDEKRRKTVIEKIHQSAITIAKNRGVTLSEFKIVNQDPPA----LSDRSIILEAEVALKELN 254 (275)
Q Consensus 181 ~~~~NvIP~~a~~~~d~~~e~~~~~~~~i~~~~~~~~~~~g~~~~~i~~~~~~p~~----~~d~~l~~~~~~~~~~~g 254 (275)
|+..|+|=+++.|++ .+.|.+.+.+-. ..+++++ -+-.-...|-+ -||++|++...+.+.++|
T Consensus 12 Pe~~NvI~GqsHF~I----KTvEDl~Ealv~------svP~ikF-GiAFcEAS~~LvR~~GnD~eL~~lA~~na~~Ig 78 (162)
T 2d16_A 12 PEGVEVIIGQGNFSI----FTVDDLARALLT------AVPGIKF-GIAMNEAKPQLTRYTGNDPELEALAAKNAVKIG 78 (162)
T ss_dssp CTTCEEEEEEESCHH----HHHHHHHHHHHH------HSTTCEE-EEEEEETTTTEEEEEESCHHHHHHHHHHHHHHC
T ss_pred CCCceEEEEecccce----eeHHHHHHHHhh------cCCCceE-EEEeeccccceEEecCCcHHHHHHHHHHHHHhc
Confidence 566787777776533 455555444332 2467777 66655444433 489999999999998875
No 76
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=30.64 E-value=54 Score=26.59 Aligned_cols=33 Identities=12% Similarity=0.302 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHcCCCCCCceEEEEccCCCCCC
Q 043727 6 LGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKR 38 (275)
Q Consensus 6 ~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~ 38 (275)
..++.++++|++.|++.+.+|.|+++-|.+.+.
T Consensus 195 ~~A~g~~~al~~~g~~vP~di~vig~D~~~~~~ 227 (289)
T 3k9c_A 195 RCATGVLDLLVRSGRDVPADISVVGYDDSRLAR 227 (289)
T ss_dssp HHHHHHHHHHHHTTCCTTTTCEEEEEECCTTTT
T ss_pred HHHHHHHHHHHHcCCCCCCceEEEEECCHHHHh
Confidence 457889999999999888999999998887644
No 77
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=29.65 E-value=53 Score=26.37 Aligned_cols=33 Identities=15% Similarity=0.134 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHcCCCCCCceEEEEccCCCCCC
Q 043727 6 LGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKR 38 (275)
Q Consensus 6 ~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~ 38 (275)
..++.++++|++.|++.+.+|.|+++-+-+.+.
T Consensus 191 ~~a~g~~~al~~~g~~vP~di~vig~d~~~~~~ 223 (276)
T 3jy6_A 191 RWLLEFFPNLIISGLIDNQTVTATGFADTDFIR 223 (276)
T ss_dssp HHHHHHSHHHHHSSSCCSSSEEEEEBCCCSTTT
T ss_pred HHHHHHHHHHHHcCCCCCCcEEEEEECChHHhh
Confidence 467789999999999888999999998877543
No 78
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=26.83 E-value=63 Score=26.90 Aligned_cols=33 Identities=12% Similarity=0.058 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHcCCCCCCceEEEEccCCCCCC
Q 043727 6 LGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKR 38 (275)
Q Consensus 6 ~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~ 38 (275)
..++.++++|++.|++.+.+|.|+++-|.+.+.
T Consensus 252 ~~A~g~~~al~~~G~~vP~di~vvg~D~~~~~~ 284 (338)
T 3dbi_A 252 DMAIGAMKALHERGVAVPEQVSVIGFDDIAIAP 284 (338)
T ss_dssp HHHHHHHHHHHHTTCCTTTTCEEEEESCCTTGG
T ss_pred HHHHHHHHHHHHcCCCCCCCeEEEEECChHHHh
Confidence 457789999999999888999999998887643
No 79
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=25.09 E-value=68 Score=26.05 Aligned_cols=31 Identities=6% Similarity=0.144 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHcCCCCCCceEEEEccCCCC
Q 043727 6 LGDIDIINIVIRSGFKPRRSLEFIMFTSEEP 36 (275)
Q Consensus 6 ~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~ 36 (275)
..++.++++|++.|++.+.+|.|+++-|-+.
T Consensus 202 ~~A~g~~~al~~~g~~vP~di~vig~D~~~~ 232 (295)
T 3hcw_A 202 MLHLAILSVLYELNIEIPKDVMTATFNDSYL 232 (295)
T ss_dssp HHHHHHHHHHHHTTCCTTTTEEEEEECCSHH
T ss_pred HHHHHHHHHHHHcCCCCCCceEEEEeCChhH
Confidence 4578899999999998889999999987664
No 80
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=24.19 E-value=78 Score=25.56 Aligned_cols=33 Identities=6% Similarity=0.078 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHcCCCCCCceEEEEccCCCCCC
Q 043727 6 LGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKR 38 (275)
Q Consensus 6 ~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~ 38 (275)
..++.++++|++.|++.+.+|.|+++-+-+.+.
T Consensus 199 ~~A~g~~~al~~~G~~vP~di~vvg~D~~~~~~ 231 (290)
T 2rgy_A 199 TMAVSALARFQQLGISVPGDVSVIGYDDDYSAA 231 (290)
T ss_dssp HHHHHHHHHHHHTTCCTTTTCEEEEEECCTTST
T ss_pred HHHHHHHHHHHHcCCCCCCceEEEEeCCchHhc
Confidence 456789999999999888899999998877543
No 81
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=23.43 E-value=74 Score=25.68 Aligned_cols=32 Identities=16% Similarity=0.120 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHcCCCCCCceEEEEccCCCCC
Q 043727 6 LGDIDIINIVIRSGFKPRRSLEFIMFTSEEPK 37 (275)
Q Consensus 6 ~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~ 37 (275)
..++.++++|++.|++.+.+|.|+++-+.+.+
T Consensus 198 ~~a~g~~~al~~~G~~vP~di~vig~d~~~~~ 229 (287)
T 3bbl_A 198 TMAIGAMAAARERGLTIGTDLAIIGFDDAPMV 229 (287)
T ss_dssp HHHHHHHHHHHHTTCCBTTTBEEEEESCCTTG
T ss_pred HHHHHHHHHHHHcCCCCCCCEEEEEECCchHh
Confidence 45678899999999988889999999887754
No 82
>3jvd_A Transcriptional regulators; structural genomics, PSI-2, sugar binding protein, transcrip regulation, protein structure initiative; 2.30A {Corynebacterium glutamicum}
Probab=22.79 E-value=73 Score=26.56 Aligned_cols=33 Identities=6% Similarity=-0.070 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHcCCCCCCceEEEEccCCCCCC
Q 043727 6 LGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKR 38 (275)
Q Consensus 6 ~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~ 38 (275)
..++.++++|++.|++.+.+|.|+++-|.+.+.
T Consensus 241 ~~A~g~~~al~~~G~~vP~disvig~D~~~~~~ 273 (333)
T 3jvd_A 241 RLMAGVMRAFTRLNVRVPHDVVIGGYDDPEWYS 273 (333)
T ss_dssp HHHHHHHHHHHHTTCCTTTTCEEEEESCCGGGG
T ss_pred HHHHHHHHHHHHcCCCCCCceEEEEECChHHHH
Confidence 457789999999999888999999998877543
No 83
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=22.35 E-value=70 Score=26.67 Aligned_cols=33 Identities=15% Similarity=0.104 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHcCCCCCCceEEEEccCCCCCC
Q 043727 6 LGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKR 38 (275)
Q Consensus 6 ~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~ 38 (275)
..++.++++|++.|++.+.+|.|+++-|.+.+.
T Consensus 249 ~~A~g~~~al~~~G~~vP~disvvgfD~~~~~~ 281 (339)
T 3h5o_A 249 DLAIGALARSQQLGIAVPERLAIAGFNDLQPAA 281 (339)
T ss_dssp HHHHHHHHHHHHTTCCTTTTCEEECSBCCGGGT
T ss_pred HHHHHHHHHHHHcCCCCCCCEEEEEECCHHHHh
Confidence 457889999999999888999999998777543
No 84
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=22.28 E-value=75 Score=25.91 Aligned_cols=31 Identities=10% Similarity=0.209 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHcCCCCCCceEEEEccCCCC
Q 043727 6 LGDIDIINIVIRSGFKPRRSLEFIMFTSEEP 36 (275)
Q Consensus 6 ~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~ 36 (275)
..++.++++|++.|++.+.+|.|+++-|-+.
T Consensus 207 ~~A~g~~~al~~~G~~vP~di~vig~D~~~~ 237 (303)
T 3kke_A 207 NAAVGALSTALRLGLRVPEDLSIVGINTTWV 237 (303)
T ss_dssp HHHHHHHHHHHHTTCCTTTTCEEEEESCCHH
T ss_pred HHHHHHHHHHHHcCCCCCCceEEEEEcChhH
Confidence 4578899999999998889999999977664
No 85
>3hs3_A Ribose operon repressor; PSI-II, NYSGXRC, periplasmic binding protein, structural genomics, protein structure initiative; 1.60A {Lactobacillus acidophilus}
Probab=22.26 E-value=66 Score=25.86 Aligned_cols=32 Identities=16% Similarity=0.178 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHcCCCCCCceEEEEccCCCCC
Q 043727 6 LGDIDIINIVIRSGFKPRRSLEFIMFTSEEPK 37 (275)
Q Consensus 6 ~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~ 37 (275)
..++.++++|++.|++.+.+|.|+++-|-+.+
T Consensus 188 ~~A~g~~~al~~~g~~vP~di~vig~d~~~~~ 219 (277)
T 3hs3_A 188 LYAAEIIKEAKRRNLKIPDDFQLVGYDNNILC 219 (277)
T ss_dssp HHHHHHHHHHHHTTCCTTTTCEEECSBCCGGG
T ss_pred HHHHHHHHHHHHcCCCCCCceEEEeeCCcHHH
Confidence 45788999999999988899999999877654
No 86
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=22.09 E-value=66 Score=26.90 Aligned_cols=32 Identities=9% Similarity=0.068 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHcCCCCCCceEEEEccCCCCC
Q 043727 6 LGDIDIINIVIRSGFKPRRSLEFIMFTSEEPK 37 (275)
Q Consensus 6 ~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~ 37 (275)
..++.++++|++.|++.+.+|.|+++-|-+.+
T Consensus 257 ~~A~g~~~al~~~g~~vP~disvvg~D~~~~~ 288 (344)
T 3kjx_A 257 MIAAGGLLYLLEQGIDIPGQIGLAGFNNVELL 288 (344)
T ss_dssp HHHHHHHHHHHHTTCCTTTTCEEECSBCCGGG
T ss_pred HHHHHHHHHHHHcCCCCCCceEEEEECChHHH
Confidence 46788999999999988899999999887754
No 87
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=21.88 E-value=68 Score=25.61 Aligned_cols=33 Identities=24% Similarity=0.318 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHcCCCCCCceEEEEccCCCCCC
Q 043727 6 LGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKR 38 (275)
Q Consensus 6 ~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~ 38 (275)
..++.++++|++.|++.+.+|.|+++-+.+.+.
T Consensus 187 ~~a~g~~~al~~~g~~vP~di~vig~d~~~~~~ 219 (277)
T 3e61_A 187 LLAINVLGIVQRYHFKVPAEIQIIGYDNIPFSE 219 (277)
T ss_dssp HHHHHHHHHHHHTTCCTTTTCEEECSBCCGGGG
T ss_pred HHHHHHHHHHHHcCCCCCCceEEEeeCCchHHh
Confidence 457789999999999888999999998877543
No 88
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=21.59 E-value=75 Score=25.91 Aligned_cols=31 Identities=6% Similarity=0.229 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHcCCCCCCceEEEEccCCCC
Q 043727 6 LGDIDIINIVIRSGFKPRRSLEFIMFTSEEP 36 (275)
Q Consensus 6 ~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~ 36 (275)
..++.++++|++.|++.+.+|.|+++-|-+.
T Consensus 212 ~~A~g~~~al~~~g~~vP~di~vig~D~~~~ 242 (305)
T 3huu_A 212 MLNMQLLNVLYEYQLRIPEDIQTATFNTSFL 242 (305)
T ss_dssp HHHHHHHHHHHHTTCCTTTTCEEEEESCSHH
T ss_pred HHHHHHHHHHHHcCCCCCcceEEEEECCcch
Confidence 4678899999999998889999999987764
No 89
>3kz5_E Protein SOPB; partition, segregation, F plasmid, DNA-binding protein, DNA- DNA binding protein; 1.58A {Escherichia coli}
Probab=21.47 E-value=1.3e+02 Score=17.98 Aligned_cols=24 Identities=13% Similarity=0.199 Sum_probs=15.5
Q ss_pred ceEEEEEe---CCHhHHHHHHHHHHHH
Q 043727 189 SKSHLEID---IDEKRRKTVIEKIHQS 212 (275)
Q Consensus 189 ~~a~~~~d---~~~e~~~~~~~~i~~~ 212 (275)
|.+.|.+| .+.+.+++++..+++.
T Consensus 21 d~Vsf~Ld~~~iP~~~IeKIE~lL~e~ 47 (52)
T 3kz5_E 21 DKMVLNLDRSRVPTECIEKIEAILKEL 47 (52)
T ss_dssp TEEEEEEETTTSCHHHHHHHHHHHHHH
T ss_pred CeEEEEeccccCCHHHHHHHHHHHHHH
Confidence 56788888 6776666555555443
No 90
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=21.25 E-value=80 Score=25.53 Aligned_cols=32 Identities=19% Similarity=0.242 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHcCCCCCCceEEEEccCCCCC
Q 043727 6 LGDIDIINIVIRSGFKPRRSLEFIMFTSEEPK 37 (275)
Q Consensus 6 ~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~ 37 (275)
..++.++++|++.|++.+.+|.|+++-+.+.+
T Consensus 205 ~~A~g~~~al~~~G~~vP~di~vvg~D~~~~~ 236 (289)
T 2fep_A 205 EMALGIIHAAQDQGLSIPEDLDIIGFDNTRLS 236 (289)
T ss_dssp HHHHHHHHHHHHTTCCTTTTCEEEEEECCGGG
T ss_pred HHHHHHHHHHHHcCCCCCCCeEEEEECChHHH
Confidence 45778899999999987889999999887754
No 91
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=21.25 E-value=75 Score=25.66 Aligned_cols=32 Identities=16% Similarity=0.127 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHcCCCCCCceEEEEccCCCCC
Q 043727 6 LGDIDIINIVIRSGFKPRRSLEFIMFTSEEPK 37 (275)
Q Consensus 6 ~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~ 37 (275)
..++.++++|++.|++.+.+|.|+++-+.+..
T Consensus 198 ~~A~g~~~al~~~g~~vP~di~vig~d~~~~~ 229 (288)
T 3gv0_A 198 SSTIALVAGFEAAGVKIGEDVDIVSKQSAEFL 229 (288)
T ss_dssp HHHHHHHHHHHTTTCCTTTSCEEEEEESSTTH
T ss_pred HHHHHHHHHHHHcCCCCCCceEEEEecChHHH
Confidence 45678999999999988899999999887753
No 92
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=20.58 E-value=38 Score=30.87 Aligned_cols=39 Identities=10% Similarity=0.233 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHc----CCCCCCceEEEEccCCCCCCCCCCcchhh
Q 043727 3 KLCLGDIDIINIVIRS----GFKPRRSLEFIMFTSEEPKRYGISCLGSL 47 (275)
Q Consensus 3 ~Gv~a~l~a~~~L~~~----~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~ 47 (275)
.|+.++|++++.+++. .-.+...+ +++|..||. |+.|++
T Consensus 288 ~~~~~~leaL~~~~~~~~~~~~~~~~~v-~v~~dqEEV-----Gs~ga~ 330 (496)
T 3vat_A 288 HSCFCALQALIDSCSAPASLAADPHVRM-IALYDNEEV-----GSESAQ 330 (496)
T ss_dssp HHHHHHHHHHHHHTTSHHHHHHCCSEEE-EEEESCGGG-----TSCSSS
T ss_pred HHHHHHHHHHHhhhccccccccCCCcEE-EEEEccCCc-----CCCcch
No 93
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=20.55 E-value=87 Score=25.97 Aligned_cols=32 Identities=13% Similarity=0.197 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHcCCCCCCceEEEEccCCCCC
Q 043727 6 LGDIDIINIVIRSGFKPRRSLEFIMFTSEEPK 37 (275)
Q Consensus 6 ~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~ 37 (275)
..++.++++|++.|++.+.+|.|+++-|-+.+
T Consensus 249 ~~A~g~~~al~~~G~~vP~disvig~D~~~~~ 280 (332)
T 2o20_A 249 TVAVGLLSAMMDKGVKVPEDFEIISGANSPIT 280 (332)
T ss_dssp HHHHHHHHHHHHTTCCTTTTCEEEESSCCGGG
T ss_pred HHHHHHHHHHHHcCCCCccCEEEEEeCChHHH
Confidence 35678999999999988899999999887754
No 94
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=20.50 E-value=81 Score=25.39 Aligned_cols=32 Identities=9% Similarity=0.006 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHcCCCCCCceEEEEccCCCCC
Q 043727 6 LGDIDIINIVIRSGFKPRRSLEFIMFTSEEPK 37 (275)
Q Consensus 6 ~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~ 37 (275)
..++.++++|++.|++.+.+|.|+++-+.+..
T Consensus 196 ~~a~g~~~al~~~g~~vP~di~vvg~d~~~~~ 227 (291)
T 3egc_A 196 RITEGAMQALNVLGLRYGPDVEIVSFDNLPWM 227 (291)
T ss_dssp HHHHHHHHHHHHHTCCBTTTBEEEEESCCGGG
T ss_pred HHHHHHHHHHHHcCCCCCCceEEEEecCchhH
Confidence 45778999999999988899999999887753
No 95
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=20.36 E-value=75 Score=25.38 Aligned_cols=31 Identities=13% Similarity=0.232 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHcCCCCCCceEEEEccCCCC
Q 043727 6 LGDIDIINIVIRSGFKPRRSLEFIMFTSEEP 36 (275)
Q Consensus 6 ~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~ 36 (275)
..++.++++|++.|++.+.+|.|+++-+.+.
T Consensus 186 ~~a~g~~~al~~~g~~vP~di~vvg~d~~~~ 216 (280)
T 3gyb_A 186 ITAIGALGAARELGLRVPEDLSIIGYDNTPL 216 (280)
T ss_dssp HHHHHHHHHHHHHTCCTTTTCEEEEESCCHH
T ss_pred HHHHHHHHHHHHcCCCCCCeeEEEEECCchH
Confidence 4677899999999998889999999987764
No 96
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=20.31 E-value=78 Score=25.44 Aligned_cols=31 Identities=13% Similarity=0.342 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHcCCCCCCceEEEEccCCCC
Q 043727 6 LGDIDIINIVIRSGFKPRRSLEFIMFTSEEP 36 (275)
Q Consensus 6 ~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~ 36 (275)
..++.++++|++.|++.+.+|.|+++-+.+.
T Consensus 202 ~~a~g~~~al~~~g~~vP~di~vig~d~~~~ 232 (292)
T 3k4h_A 202 LIGLGVLSALSKKGFVVPKDVSIVSFNNALL 232 (292)
T ss_dssp HHHHHHHHHHHHTTCCTTTTCEEEEESCCHH
T ss_pred HHHHHHHHHHHHhCCCCCCeEEEEEecCcch
Confidence 4567899999999998889999999977653
No 97
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=20.03 E-value=84 Score=25.24 Aligned_cols=31 Identities=6% Similarity=0.168 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHcCCCCCCceEEEEccCCCC
Q 043727 6 LGDIDIINIVIRSGFKPRRSLEFIMFTSEEP 36 (275)
Q Consensus 6 ~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~ 36 (275)
..++.++++|++.|++.+.+|.|+++-+.+.
T Consensus 211 ~~a~g~~~al~~~g~~vP~di~vvg~d~~~~ 241 (298)
T 3tb6_A 211 EIALKVIDMLREMDLKVPEDMSIVGYDDSHF 241 (298)
T ss_dssp HHHHHHHHHHHHTTCCTTTTCEEECSBCCTH
T ss_pred HHHHHHHHHHHHcCCCCCCceEEEecCCcHH
Confidence 4578899999999998889999999977664
Done!