BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 043734
         (175 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P13240|DR206_PEA Disease resistance response protein 206 OS=Pisum sativum GN=PI206
           PE=2 SV=2
          Length = 184

 Score = 66.6 bits (161), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 87/170 (51%), Gaps = 15/170 (8%)

Query: 3   LSGKFLFLVGVLTLFCTTEAMKSK------VTRMQFYMHDIV----SGPTATAVPVAGRS 52
           +  K L L   + LF  + A+ +K         + FY HDI+    +   AT+  VA   
Sbjct: 1   MGSKLLVLFVFVMLFALSSAIPNKRKPYKPCKNLVFYFHDILYNGKNAANATSAIVAAPE 60

Query: 53  --NFTSPDPIKAMFGSVFVMDNPLTMTPDPNSTVIGRAQGIYAMSSQQDEFSLLMTLTYG 110
             + T   P ++ FG++ V D+P+T++   +S  +GRAQG Y +   ++ ++  ++ T+ 
Sbjct: 61  GVSLTKLAP-QSHFGNIIVFDDPITLSHSLSSKQVGRAQGFY-IYDTKNTYTSWLSFTFV 118

Query: 111 FTSGPYNGSSFSVLGRNPVMSEVREMPIVGGTGIFRLARGYCLAKTSSMD 160
             S  + G + +  G +P++++ R++ + GGTG F + RG     T + +
Sbjct: 119 LNSTHHQG-TITFAGADPIVAKTRDISVTGGTGDFFMHRGIATITTDAFE 167


>sp|Q5M7S0|S38A9_XENTR Putative sodium-coupled neutral amino acid transporter 9 OS=Xenopus
           tropicalis GN=slc38a9 PE=2 SV=1
          Length = 554

 Score = 33.5 bits (75), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 17/59 (28%)

Query: 8   LFLVGVLTLFCTTEAMKSKVTRMQFYMHDIVSGPTATAVPVAGRSNFTSPDPIKAMFGS 66
           LFL+G+LTL+C    +KS+ T                 +P+   SN+  PD  +  FGS
Sbjct: 147 LFLMGILTLYCCYRVVKSRGT-----------------IPLTDTSNWEFPDVCQYYFGS 188


>sp|Q9HMK4|SYFA_HALSA Phenylalanine--tRNA ligase alpha subunit OS=Halobacterium salinarum
           (strain ATCC 700922 / JCM 11081 / NRC-1) GN=pheS PE=3
           SV=1
          Length = 502

 Score = 32.3 bits (72), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 3/43 (6%)

Query: 104 LMTLTYGFTSGPYNGSSFSVLGRNPVMSEVREMPIVGGTGIFR 146
           +  L +  T  PY   SF + GR+P   E+ E   +G +GIFR
Sbjct: 410 IHDLQFKPTYNPYTEPSFELFGRHPETGELIE---IGNSGIFR 449


>sp|B0R806|SYFA_HALS3 Phenylalanine--tRNA ligase alpha subunit OS=Halobacterium salinarum
           (strain ATCC 29341 / DSM 671 / R1) GN=pheS PE=3 SV=1
          Length = 502

 Score = 32.3 bits (72), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 3/43 (6%)

Query: 104 LMTLTYGFTSGPYNGSSFSVLGRNPVMSEVREMPIVGGTGIFR 146
           +  L +  T  PY   SF + GR+P   E+ E   +G +GIFR
Sbjct: 410 IHDLQFKPTYNPYTEPSFELFGRHPETGELIE---IGNSGIFR 449


>sp|Q6DFK0|S38A9_XENLA Putative sodium-coupled neutral amino acid transporter 9 OS=Xenopus
           laevis GN=slc38a9 PE=2 SV=1
          Length = 554

 Score = 30.8 bits (68), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 17/59 (28%)

Query: 8   LFLVGVLTLFCTTEAMKSKVTRMQFYMHDIVSGPTATAVPVAGRSNFTSPDPIKAMFGS 66
           LFL+G+LTL+C    +KS+ T                 +P+   S +  PD  +  FGS
Sbjct: 147 LFLMGILTLYCCYRVVKSRGT-----------------IPLTDTSTWEFPDVCQYYFGS 188


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.322    0.135    0.395 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,632,561
Number of Sequences: 539616
Number of extensions: 2477852
Number of successful extensions: 4309
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 4304
Number of HSP's gapped (non-prelim): 12
length of query: 175
length of database: 191,569,459
effective HSP length: 110
effective length of query: 65
effective length of database: 132,211,699
effective search space: 8593760435
effective search space used: 8593760435
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)