Query 043735
Match_columns 336
No_of_seqs 253 out of 2554
Neff 10.4
Searched_HMMs 46136
Date Fri Mar 29 07:51:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043735.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043735hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0569 Permease of the major 100.0 5.9E-30 1.3E-34 229.6 29.2 313 16-335 2-322 (485)
2 PRK10077 xylE D-xylose transpo 100.0 1.6E-27 3.4E-32 221.3 30.8 299 19-333 6-321 (479)
3 TIGR00887 2A0109 phosphate:H+ 100.0 1.4E-28 3E-33 229.3 23.5 288 15-318 6-323 (502)
4 KOG0254 Predicted transporter 100.0 4.3E-27 9.3E-32 219.5 28.7 302 15-332 35-343 (513)
5 TIGR01299 synapt_SV2 synaptic 100.0 4.8E-27 1E-31 223.5 27.9 272 20-312 162-474 (742)
6 TIGR00879 SP MFS transporter, 100.0 1.4E-26 3.1E-31 214.2 29.6 305 15-334 18-335 (481)
7 TIGR02332 HpaX 4-hydroxyphenyl 100.0 1.5E-26 3.2E-31 210.3 22.1 257 71-335 34-296 (412)
8 COG2271 UhpC Sugar phosphate p 100.0 2.6E-27 5.6E-32 204.3 15.9 245 72-336 56-306 (448)
9 COG2814 AraJ Arabinose efflux 100.0 2.7E-26 5.8E-31 200.4 21.9 227 69-335 37-264 (394)
10 PRK10642 proline/glycine betai 99.9 3.4E-25 7.3E-30 205.9 26.3 267 26-333 17-301 (490)
11 PRK11663 regulatory protein Uh 99.9 1.4E-25 3.1E-30 205.4 21.8 242 74-335 52-296 (434)
12 PRK10406 alpha-ketoglutarate t 99.9 9.5E-25 2.1E-29 199.9 26.6 260 20-332 17-293 (432)
13 TIGR00891 2A0112 putative sial 99.9 1.1E-24 2.3E-29 197.7 26.5 189 19-228 6-194 (405)
14 TIGR00898 2A0119 cation transp 99.9 1.7E-24 3.8E-29 202.2 22.9 220 68-293 112-337 (505)
15 PF00083 Sugar_tr: Sugar (and 99.9 4.5E-30 9.8E-35 236.5 -14.8 281 29-318 4-288 (451)
16 TIGR00903 2A0129 major facilit 99.9 1.9E-24 4.1E-29 193.1 20.3 223 72-333 18-241 (368)
17 PRK11551 putative 3-hydroxyphe 99.9 8.5E-24 1.8E-28 192.2 24.8 260 22-335 12-272 (406)
18 PRK12307 putative sialic acid 99.9 5.3E-24 1.2E-28 194.7 23.5 267 23-334 16-282 (426)
19 PRK10213 nepI ribonucleoside t 99.9 1.4E-23 3E-28 189.8 25.2 221 72-335 47-269 (394)
20 TIGR00895 2A0115 benzoate tran 99.9 2.8E-24 6E-29 194.4 20.7 256 74-335 46-302 (398)
21 PRK03545 putative arabinose tr 99.9 9.8E-24 2.1E-28 190.8 23.8 221 72-335 36-258 (390)
22 TIGR00894 2A0114euk Na(+)-depe 99.9 6.6E-24 1.4E-28 196.2 22.6 242 72-334 68-313 (465)
23 PRK09556 uhpT sugar phosphate 99.9 1.9E-24 4.1E-29 199.8 15.8 248 72-335 56-311 (467)
24 PRK09952 shikimate transporter 99.9 9E-23 1.9E-27 187.0 25.3 184 26-228 23-225 (438)
25 KOG2532 Permease of the major 99.9 3.5E-23 7.5E-28 188.0 21.9 238 72-333 65-309 (466)
26 PRK14995 methyl viologen resis 99.9 3.9E-23 8.4E-28 192.3 22.1 181 23-226 4-186 (495)
27 PRK09705 cynX putative cyanate 99.9 1.5E-22 3.3E-27 183.0 24.6 221 72-335 36-257 (393)
28 PRK15403 multidrug efflux syst 99.9 1.3E-22 2.7E-27 184.6 23.8 224 72-332 43-268 (413)
29 PRK15075 citrate-proton sympor 99.9 3.5E-22 7.5E-27 183.1 24.0 253 27-334 17-290 (434)
30 PLN00028 nitrate transmembrane 99.9 2.2E-22 4.7E-27 186.2 22.5 235 72-335 63-305 (476)
31 KOG2533 Permease of the major 99.9 4.5E-23 9.7E-28 187.7 16.9 248 71-335 72-326 (495)
32 PRK03699 putative transporter; 99.9 7.4E-22 1.6E-26 178.7 24.5 249 27-335 9-258 (394)
33 TIGR00893 2A0114 d-galactonate 99.9 7.1E-23 1.5E-27 184.7 17.4 245 72-334 21-267 (399)
34 PRK03893 putative sialic acid 99.9 2.1E-21 4.6E-26 181.1 27.0 183 23-228 18-200 (496)
35 PRK10091 MFS transport protein 99.9 8.2E-22 1.8E-26 177.7 23.3 150 74-226 32-182 (382)
36 KOG0255 Synaptic vesicle trans 99.9 2.9E-22 6.2E-27 187.9 20.2 170 73-248 111-280 (521)
37 KOG1330 Sugar transporter/spin 99.9 3.4E-24 7.5E-29 186.8 6.5 155 70-226 58-213 (493)
38 TIGR00710 efflux_Bcr_CflA drug 99.9 1.3E-21 2.9E-26 176.3 22.8 222 75-334 35-258 (385)
39 TIGR00881 2A0104 phosphoglycer 99.9 5.3E-23 1.2E-27 184.7 13.4 242 75-335 25-269 (379)
40 KOG0252 Inorganic phosphate tr 99.9 5.4E-23 1.2E-27 178.8 12.7 287 17-322 33-343 (538)
41 PRK11273 glpT sn-glycerol-3-ph 99.9 4E-22 8.6E-27 183.6 19.2 239 76-334 59-305 (452)
42 PF07690 MFS_1: Major Facilita 99.9 1E-22 2.2E-27 181.2 13.7 232 72-334 24-259 (352)
43 TIGR00711 efflux_EmrB drug res 99.9 1.4E-21 3.1E-26 181.7 21.9 150 74-226 31-181 (485)
44 PRK15402 multidrug efflux syst 99.9 3.1E-21 6.7E-26 175.4 22.1 149 75-226 43-192 (406)
45 TIGR00900 2A0121 H+ Antiporter 99.9 7.8E-22 1.7E-26 176.3 17.4 225 76-334 30-263 (365)
46 TIGR00890 2A0111 Oxalate/Forma 99.9 2.7E-21 5.8E-26 173.5 19.8 151 72-226 30-181 (377)
47 TIGR00805 oat sodium-independe 99.9 4E-22 8.7E-27 189.2 14.7 250 69-329 57-377 (633)
48 PRK11043 putative transporter; 99.9 1.1E-20 2.3E-25 171.6 23.5 220 73-333 34-253 (401)
49 TIGR00892 2A0113 monocarboxyla 99.9 7.2E-21 1.6E-25 175.2 22.4 244 73-334 47-292 (455)
50 TIGR00712 glpT glycerol-3-phos 99.9 2.9E-21 6.2E-26 177.2 19.5 240 76-334 57-303 (438)
51 PRK15034 nitrate/nitrite trans 99.9 8.3E-21 1.8E-25 171.5 21.7 197 74-312 64-281 (462)
52 TIGR00886 2A0108 nitrite extru 99.9 4.2E-21 9.1E-26 172.0 19.7 239 72-335 29-278 (366)
53 PRK11652 emrD multidrug resist 99.9 1.9E-20 4E-25 169.6 23.4 149 75-226 38-187 (394)
54 PRK11102 bicyclomycin/multidru 99.9 5.6E-21 1.2E-25 171.9 19.6 224 75-334 21-246 (377)
55 TIGR00806 rfc RFC reduced fola 99.9 8.9E-21 1.9E-25 168.6 20.3 154 72-230 53-210 (511)
56 PRK10473 multidrug efflux syst 99.9 2.6E-20 5.6E-25 168.6 22.9 149 75-226 33-182 (392)
57 TIGR00897 2A0118 polyol permea 99.9 4.4E-20 9.5E-25 167.6 21.2 224 76-334 44-273 (402)
58 PRK10133 L-fucose transporter; 99.9 6.8E-20 1.5E-24 167.7 22.5 122 72-193 53-177 (438)
59 PRK11195 lysophospholipid tran 99.9 2.2E-19 4.9E-24 162.3 24.6 224 76-335 34-258 (393)
60 TIGR00896 CynX cyanate transpo 99.9 1E-19 2.2E-24 162.4 22.2 222 73-335 28-249 (355)
61 PRK10504 putative transporter; 99.9 2.1E-19 4.5E-24 166.6 23.5 147 76-225 41-188 (471)
62 KOG0253 Synaptic vesicle trans 99.9 2.7E-20 5.8E-25 157.6 15.8 234 72-311 105-354 (528)
63 PRK12382 putative transporter; 99.8 6.8E-19 1.5E-23 159.3 25.8 136 74-212 45-188 (392)
64 PRK05122 major facilitator sup 99.8 1.9E-19 4.2E-24 163.2 22.2 138 75-215 46-191 (399)
65 TIGR00885 fucP L-fucose:H+ sym 99.8 2.3E-19 4.9E-24 162.9 22.3 170 30-219 8-203 (410)
66 PRK03633 putative MFS family t 99.8 2.2E-19 4.8E-24 161.8 22.1 119 76-194 37-155 (381)
67 PRK09874 drug efflux system pr 99.8 9.9E-19 2.2E-23 159.0 25.2 146 76-225 45-196 (408)
68 PRK11646 multidrug resistance 99.8 9.7E-19 2.1E-23 158.5 24.5 146 75-224 41-187 (400)
69 TIGR00883 2A0106 metabolite-pr 99.8 8.3E-19 1.8E-23 158.3 21.9 226 77-334 27-271 (394)
70 COG2223 NarK Nitrate/nitrite t 99.8 2.5E-19 5.5E-24 155.3 17.4 226 70-333 39-269 (417)
71 PRK10489 enterobactin exporter 99.8 2.5E-19 5.4E-24 163.5 17.2 223 76-335 48-276 (417)
72 cd06174 MFS The Major Facilita 99.8 1.2E-18 2.6E-23 154.7 20.9 197 76-334 30-227 (352)
73 PRK10054 putative transporter; 99.8 1.6E-18 3.4E-23 156.9 21.9 147 75-225 38-185 (395)
74 TIGR00899 2A0120 sugar efflux 99.8 3E-18 6.4E-23 154.0 20.7 151 73-226 26-180 (375)
75 KOG2615 Permease of the major 99.8 6.2E-19 1.3E-23 150.2 14.2 150 76-226 64-217 (451)
76 TIGR00901 2A0125 AmpG-related 99.8 6.1E-18 1.3E-22 151.1 19.3 222 75-328 18-254 (356)
77 PRK10642 proline/glycine betai 99.8 5.4E-18 1.2E-22 157.7 17.4 169 76-246 282-458 (490)
78 COG2807 CynX Cyanate permease 99.8 4.8E-17 1E-21 138.4 21.3 224 70-335 37-260 (395)
79 KOG2504 Monocarboxylate transp 99.8 4.2E-18 9.1E-23 156.8 15.7 257 72-336 73-351 (509)
80 PRK11010 ampG muropeptide tran 99.8 2.2E-17 4.7E-22 153.4 20.2 147 76-226 43-198 (491)
81 PRK11128 putative 3-phenylprop 99.8 1.4E-17 3.1E-22 150.1 18.0 217 76-333 35-255 (382)
82 PRK11902 ampG muropeptide tran 99.8 3.7E-17 8.1E-22 148.4 19.8 147 76-226 30-185 (402)
83 PRK15011 sugar efflux transpor 99.8 4.2E-16 9.2E-21 141.1 25.5 150 73-226 44-198 (393)
84 PRK06814 acylglycerophosphoeth 99.8 1.6E-17 3.4E-22 169.6 17.2 223 80-335 52-278 (1140)
85 TIGR00902 2A0127 phenyl propri 99.8 7.8E-17 1.7E-21 145.3 19.6 219 76-333 35-255 (382)
86 PRK08633 2-acyl-glycerophospho 99.7 8.9E-17 1.9E-21 164.4 21.1 229 79-335 46-286 (1146)
87 COG0738 FucP Fucose permease [ 99.7 4.4E-16 9.5E-21 134.5 21.0 247 33-335 21-289 (422)
88 PTZ00207 hypothetical protein; 99.7 7.1E-16 1.5E-20 143.4 23.5 147 72-225 54-208 (591)
89 KOG3764 Vesicular amine transp 99.7 2.8E-17 6E-22 141.0 9.3 149 73-224 99-248 (464)
90 PF06609 TRI12: Fungal trichot 99.7 3E-15 6.4E-20 138.6 23.0 138 79-220 77-214 (599)
91 TIGR00882 2A0105 oligosacchari 99.7 1.5E-15 3.2E-20 137.7 20.4 145 75-225 33-186 (396)
92 TIGR00924 yjdL_sub1_fam amino 99.7 2.2E-15 4.7E-20 139.4 21.0 141 75-218 43-187 (475)
93 PRK10207 dipeptide/tripeptide 99.7 5.2E-16 1.1E-20 143.6 16.3 134 74-210 44-181 (489)
94 PRK09528 lacY galactoside perm 99.7 9.6E-15 2.1E-19 133.5 20.4 142 75-222 41-190 (420)
95 PF05977 MFS_3: Transmembrane 99.6 2.2E-14 4.9E-19 132.8 19.4 224 77-335 42-271 (524)
96 TIGR00880 2_A_01_02 Multidrug 99.6 4.5E-15 9.8E-20 113.7 12.2 135 87-224 5-140 (141)
97 TIGR00792 gph sugar (Glycoside 99.6 3.7E-15 8.1E-20 136.8 13.6 153 74-226 29-198 (437)
98 PRK09584 tppB putative tripept 99.6 3.7E-14 8.1E-19 131.9 19.4 137 75-214 52-192 (500)
99 TIGR01299 synapt_SV2 synaptic 99.6 2.8E-14 6.2E-19 136.6 16.1 141 82-226 597-737 (742)
100 PRK15011 sugar efflux transpor 99.6 2.6E-13 5.7E-18 122.9 21.5 145 76-224 248-392 (393)
101 PRK15462 dipeptide/tripeptide 99.6 8.4E-14 1.8E-18 127.6 17.0 133 76-211 41-177 (493)
102 TIGR00889 2A0110 nucleoside tr 99.6 1.1E-13 2.4E-18 126.1 17.7 149 78-226 249-406 (418)
103 TIGR01301 GPH_sucrose GPH fami 99.6 1.4E-13 3E-18 125.6 17.8 151 76-226 35-222 (477)
104 TIGR02718 sider_RhtX_FptX side 99.5 7.1E-13 1.5E-17 120.0 20.2 215 76-329 32-254 (390)
105 TIGR00889 2A0110 nucleoside tr 99.5 1.2E-13 2.5E-18 126.0 15.1 144 73-226 31-183 (418)
106 TIGR00899 2A0120 sugar efflux 99.5 9.4E-13 2E-17 118.3 19.6 144 76-223 231-374 (375)
107 PRK11551 putative 3-hydroxyphe 99.5 4E-13 8.7E-18 122.2 17.2 145 76-222 251-395 (406)
108 PRK05122 major facilitator sup 99.5 9.1E-13 2E-17 119.6 18.7 142 81-225 250-391 (399)
109 TIGR00890 2A0111 Oxalate/Forma 99.5 4.1E-13 8.9E-18 120.4 14.9 137 76-215 236-374 (377)
110 cd06174 MFS The Major Facilita 99.5 8E-13 1.7E-17 117.2 16.1 144 76-222 207-351 (352)
111 PRK09528 lacY galactoside perm 99.5 4.5E-13 9.9E-18 122.4 14.4 148 76-226 258-407 (420)
112 PRK09952 shikimate transporter 99.5 6.3E-12 1.4E-16 115.5 19.6 150 76-226 282-436 (438)
113 KOG3626 Organic anion transpor 99.5 3.8E-13 8.2E-18 125.7 11.5 251 69-333 121-443 (735)
114 PRK03699 putative transporter; 99.5 4.7E-12 1E-16 114.7 18.3 144 76-223 237-380 (394)
115 PRK09556 uhpT sugar phosphate 99.5 4.2E-12 9.2E-17 117.6 18.4 146 76-221 290-447 (467)
116 PRK12382 putative transporter; 99.4 7.5E-12 1.6E-16 113.3 18.2 136 82-220 251-386 (392)
117 TIGR00892 2A0113 monocarboxyla 99.4 1.8E-12 3.9E-17 119.6 13.5 140 76-217 272-415 (455)
118 KOG2325 Predicted transporter/ 99.4 2.9E-11 6.3E-16 108.9 20.3 194 11-226 23-233 (488)
119 KOG2563 Permease of the major 99.4 7.1E-12 1.5E-16 110.0 15.9 268 17-335 37-318 (480)
120 TIGR00788 fbt folate/biopterin 99.4 4.4E-12 9.4E-17 117.2 15.5 147 75-226 56-212 (468)
121 TIGR00902 2A0127 phenyl propri 99.4 1.6E-11 3.5E-16 110.8 18.8 138 76-218 236-374 (382)
122 PRK09705 cynX putative cyanate 99.4 2.1E-11 4.6E-16 110.4 19.4 147 76-226 236-385 (393)
123 PRK10489 enterobactin exporter 99.4 1.3E-11 2.9E-16 112.7 18.1 148 76-226 255-403 (417)
124 PRK03893 putative sialic acid 99.4 2.3E-12 4.9E-17 120.4 13.3 132 76-210 307-440 (496)
125 PRK03633 putative MFS family t 99.4 1.6E-11 3.5E-16 110.8 17.8 139 76-220 231-369 (381)
126 PF03137 OATP: Organic Anion T 99.4 3.3E-14 7.2E-19 132.2 -0.3 255 69-331 27-354 (539)
127 PRK03545 putative arabinose tr 99.4 2.2E-11 4.8E-16 110.2 18.1 140 76-220 237-377 (390)
128 PRK10077 xylE D-xylose transpo 99.4 2.5E-11 5.5E-16 112.8 18.7 151 76-226 302-461 (479)
129 PF03825 Nuc_H_symport: Nucleo 99.4 2.4E-11 5.3E-16 109.4 17.7 221 76-331 33-256 (400)
130 PRK10429 melibiose:sodium symp 99.4 3.6E-12 7.8E-17 118.2 12.4 151 75-225 37-204 (473)
131 TIGR00883 2A0106 metabolite-pr 99.4 9.3E-12 2E-16 112.3 14.7 134 76-211 251-389 (394)
132 PRK09669 putative symporter Ya 99.4 4.6E-12 1E-16 116.6 12.7 150 75-224 40-206 (444)
133 TIGR00897 2A0118 polyol permea 99.4 2.3E-11 5E-16 110.5 17.0 142 76-222 253-400 (402)
134 TIGR00887 2A0109 phosphate:H+ 99.4 2.3E-11 5.1E-16 113.7 17.3 142 86-227 341-493 (502)
135 PF11700 ATG22: Vacuole efflux 99.4 3.7E-11 8.1E-16 110.3 18.1 150 74-225 311-470 (477)
136 TIGR00879 SP MFS transporter, 99.4 1.8E-11 3.8E-16 113.4 16.0 148 76-226 315-474 (481)
137 PRK09874 drug efflux system pr 99.4 2.9E-11 6.3E-16 110.0 17.0 136 82-220 260-395 (408)
138 TIGR00893 2A0114 d-galactonate 99.4 2.4E-11 5.1E-16 109.5 16.0 140 76-219 247-395 (399)
139 PF13347 MFS_2: MFS/sugar tran 99.3 5.9E-12 1.3E-16 115.4 10.4 149 76-224 33-200 (428)
140 TIGR00891 2A0112 putative sial 99.3 4.8E-11 1E-15 108.2 15.0 129 76-206 270-399 (405)
141 PF05631 DUF791: Protein of un 99.3 2.9E-10 6.3E-15 98.0 18.6 149 76-226 65-220 (354)
142 PRK12307 putative sialic acid 99.3 1.8E-10 3.8E-15 105.5 17.8 120 76-195 262-383 (426)
143 PRK11128 putative 3-phenylprop 99.3 3.7E-10 8E-15 101.9 19.0 134 76-214 236-370 (382)
144 PLN00028 nitrate transmembrane 99.3 7.8E-11 1.7E-15 109.3 14.9 143 76-223 284-433 (476)
145 TIGR00898 2A0119 cation transp 99.3 1.6E-10 3.4E-15 108.3 17.1 138 84-226 359-498 (505)
146 PRK10406 alpha-ketoglutarate t 99.3 1.8E-10 3.9E-15 105.7 17.1 146 76-224 275-425 (432)
147 PRK10504 putative transporter; 99.3 2E-10 4.3E-15 106.6 17.2 120 76-195 293-415 (471)
148 COG3104 PTR2 Dipeptide/tripept 99.3 6.6E-11 1.4E-15 105.6 12.9 143 75-220 56-203 (498)
149 PRK11273 glpT sn-glycerol-3-ph 99.3 3.5E-10 7.5E-15 104.4 18.3 142 76-220 285-432 (452)
150 TIGR00900 2A0121 H+ Antiporter 99.3 2.8E-10 6.1E-15 101.6 17.1 119 76-194 243-362 (365)
151 PRK11462 putative transporter; 99.3 8.9E-10 1.9E-14 101.8 20.0 150 75-224 40-206 (460)
152 PRK15075 citrate-proton sympor 99.3 4.1E-10 8.8E-15 103.4 17.6 122 76-197 270-396 (434)
153 TIGR01272 gluP glucose/galacto 99.3 6.1E-10 1.3E-14 97.3 17.8 126 75-206 173-298 (310)
154 PRK11010 ampG muropeptide tran 99.2 9.6E-10 2.1E-14 102.4 19.1 146 76-224 254-404 (491)
155 TIGR00882 2A0105 oligosacchari 99.2 7.1E-10 1.5E-14 100.6 17.8 140 76-218 250-390 (396)
156 PRK11663 regulatory protein Uh 99.2 5.6E-10 1.2E-14 102.5 17.1 142 76-220 275-421 (434)
157 TIGR00895 2A0115 benzoate tran 99.2 1.6E-10 3.6E-15 104.3 13.3 117 76-192 281-397 (398)
158 COG2270 Permeases of the major 99.2 2.7E-10 5.7E-15 99.7 13.8 150 74-225 282-431 (438)
159 PF05977 MFS_3: Transmembrane 99.2 3.8E-10 8.3E-15 104.9 15.7 139 76-217 250-388 (524)
160 TIGR00896 CynX cyanate transpo 99.2 8.9E-10 1.9E-14 98.4 16.9 121 76-197 228-350 (355)
161 COG2814 AraJ Arabinose efflux 99.2 2.2E-09 4.7E-14 94.7 17.1 142 75-221 242-384 (394)
162 TIGR02332 HpaX 4-hydroxyphenyl 99.2 2.8E-10 6.1E-15 103.7 11.7 134 76-211 275-409 (412)
163 TIGR02718 sider_RhtX_FptX side 99.2 5.4E-09 1.2E-13 94.6 19.9 139 76-217 239-385 (390)
164 TIGR00792 gph sugar (Glycoside 99.2 3.4E-09 7.3E-14 97.4 18.8 119 78-196 255-381 (437)
165 PRK10213 nepI ribonucleoside t 99.2 4.6E-09 9.9E-14 95.2 19.2 135 76-214 248-382 (394)
166 KOG0569 Permease of the major 99.1 9.4E-09 2E-13 93.4 20.5 147 76-226 301-458 (485)
167 TIGR00894 2A0114euk Na(+)-depe 99.1 1.3E-09 2.9E-14 100.9 15.2 146 76-222 293-449 (465)
168 COG2211 MelB Na+/melibiose sym 99.1 1.8E-09 3.8E-14 97.3 15.2 152 75-226 43-211 (467)
169 PF01306 LacY_symp: LacY proto 99.1 3.2E-09 6.9E-14 94.6 16.6 145 77-224 256-402 (412)
170 PF06813 Nodulin-like: Nodulin 99.1 4E-09 8.6E-14 88.0 16.1 150 72-226 29-185 (250)
171 KOG4686 Predicted sugar transp 99.1 1E-09 2.2E-14 90.9 12.3 134 74-209 294-428 (459)
172 PRK08633 2-acyl-glycerophospho 99.1 3.1E-09 6.8E-14 109.2 18.7 134 76-211 264-398 (1146)
173 PRK11646 multidrug resistance 99.1 1.5E-09 3.2E-14 98.7 14.3 120 77-196 240-360 (400)
174 TIGR00712 glpT glycerol-3-phos 99.1 1.9E-09 4.1E-14 99.1 15.3 147 76-225 283-436 (438)
175 COG2223 NarK Nitrate/nitrite t 99.1 4.5E-10 9.8E-15 98.2 10.2 143 76-221 250-399 (417)
176 TIGR00881 2A0104 phosphoglycer 99.1 6.9E-10 1.5E-14 99.5 11.9 126 76-204 248-378 (379)
177 TIGR00711 efflux_EmrB drug res 99.1 2.1E-09 4.5E-14 100.1 15.4 119 76-194 287-409 (485)
178 TIGR00710 efflux_Bcr_CflA drug 99.1 5.4E-09 1.2E-13 94.2 16.8 116 76-192 238-358 (385)
179 PRK15402 multidrug efflux syst 99.1 1.1E-08 2.4E-13 93.1 18.9 120 76-196 247-371 (406)
180 TIGR01272 gluP glucose/galacto 99.1 4.3E-09 9.3E-14 92.0 15.3 173 128-335 5-195 (310)
181 COG2271 UhpC Sugar phosphate p 99.1 1.7E-09 3.6E-14 94.7 12.4 155 45-219 270-430 (448)
182 TIGR00903 2A0129 major facilit 99.1 4.9E-09 1.1E-13 94.0 15.6 140 76-224 223-366 (368)
183 PRK10091 MFS transport protein 99.1 6.2E-09 1.3E-13 94.0 16.4 139 76-218 231-371 (382)
184 PF11700 ATG22: Vacuole efflux 99.1 4.2E-08 9.1E-13 90.4 21.6 228 81-335 71-334 (477)
185 PRK14995 methyl viologen resis 99.1 2.8E-09 6.1E-14 99.5 14.1 119 76-194 291-412 (495)
186 PRK15034 nitrate/nitrite trans 99.1 2E-09 4.4E-14 97.9 12.4 133 86-220 292-451 (462)
187 KOG2504 Monocarboxylate transp 99.1 1.6E-09 3.5E-14 100.3 11.8 146 76-223 329-476 (509)
188 PRK06814 acylglycerophosphoeth 99.0 6.4E-09 1.4E-13 106.8 17.1 133 76-210 257-409 (1140)
189 PRK09848 glucuronide transport 99.0 4.3E-08 9.3E-13 90.5 20.7 120 76-195 260-388 (448)
190 PRK09848 glucuronide transport 99.0 4.6E-09 1E-13 96.9 14.0 116 75-190 39-172 (448)
191 PF03825 Nuc_H_symport: Nucleo 99.0 4.9E-08 1.1E-12 88.1 20.2 149 77-225 240-398 (400)
192 TIGR00901 2A0125 AmpG-related 99.0 3.4E-09 7.5E-14 94.6 12.6 104 76-179 240-355 (356)
193 PRK10054 putative transporter; 99.0 7.8E-09 1.7E-13 93.7 15.1 134 76-213 240-374 (395)
194 PRK10429 melibiose:sodium symp 99.0 1.6E-08 3.5E-13 93.9 17.4 118 78-195 264-393 (473)
195 PF01306 LacY_symp: LacY proto 99.0 1.7E-08 3.7E-13 90.0 16.4 138 76-219 39-184 (412)
196 KOG2816 Predicted transporter 99.0 6.4E-09 1.4E-13 94.8 13.4 131 88-226 70-203 (463)
197 PF03209 PUCC: PUCC protein; 99.0 1.9E-08 4.1E-13 88.4 15.7 231 72-334 7-260 (403)
198 PRK11902 ampG muropeptide tran 99.0 5.1E-08 1.1E-12 88.6 18.7 138 76-220 241-387 (402)
199 PRK11195 lysophospholipid tran 99.0 6.2E-08 1.3E-12 87.8 18.8 118 76-194 237-355 (393)
200 PF01770 Folate_carrier: Reduc 99.0 2.8E-08 6.1E-13 88.2 15.5 235 76-313 36-277 (412)
201 KOG0253 Synaptic vesicle trans 99.0 1.7E-09 3.6E-14 92.9 7.3 132 89-225 390-521 (528)
202 PRK10133 L-fucose transporter; 99.0 8.5E-08 1.8E-12 88.1 19.0 129 75-209 290-419 (438)
203 COG2807 CynX Cyanate permease 99.0 1.5E-07 3.2E-12 81.1 18.7 142 76-220 239-382 (395)
204 PF07690 MFS_1: Major Facilita 99.0 2.9E-08 6.2E-13 88.2 15.4 111 76-186 238-352 (352)
205 PRK10473 multidrug efflux syst 98.9 6.8E-08 1.5E-12 87.5 16.7 113 76-194 235-348 (392)
206 TIGR00926 2A1704 Peptide:H+ sy 98.9 3.1E-07 6.7E-12 87.6 20.4 145 75-219 18-178 (654)
207 KOG4686 Predicted sugar transp 98.9 2.5E-09 5.4E-14 88.7 5.4 123 72-194 71-197 (459)
208 TIGR00788 fbt folate/biopterin 98.9 3E-08 6.4E-13 91.8 13.1 151 74-224 282-447 (468)
209 PF13347 MFS_2: MFS/sugar tran 98.9 9.1E-08 2E-12 87.8 16.2 117 80-196 260-385 (428)
210 COG0477 ProP Permeases of the 98.9 1.4E-07 2.9E-12 81.6 15.8 132 80-212 39-174 (338)
211 PRK11043 putative transporter; 98.8 2.3E-07 5E-12 84.3 16.9 118 76-194 234-356 (401)
212 PRK09669 putative symporter Ya 98.8 5.2E-07 1.1E-11 83.2 18.5 115 82-196 266-389 (444)
213 PRK11102 bicyclomycin/multidru 98.8 1.3E-06 2.9E-11 78.5 20.5 114 76-190 226-344 (377)
214 TIGR00885 fucP L-fucose:H+ sym 98.8 3.9E-07 8.5E-12 83.0 15.8 115 78-195 267-381 (410)
215 COG2211 MelB Na+/melibiose sym 98.7 1.2E-06 2.6E-11 79.3 17.5 121 76-196 268-397 (467)
216 KOG2532 Permease of the major 98.7 1.5E-07 3.2E-12 86.3 11.0 166 40-222 271-446 (466)
217 TIGR00924 yjdL_sub1_fam amino 98.7 2.3E-06 4.9E-11 79.5 18.2 134 82-218 314-463 (475)
218 TIGR00886 2A0108 nitrite extru 98.7 1E-07 2.3E-12 85.3 8.9 105 76-181 257-365 (366)
219 KOG0254 Predicted transporter 98.6 2E-06 4.4E-11 80.7 16.7 141 83-226 332-487 (513)
220 COG0738 FucP Fucose permease [ 98.6 1.3E-06 2.9E-11 76.4 13.8 133 76-214 268-400 (422)
221 PRK11652 emrD multidrug resist 98.6 1E-05 2.2E-10 73.3 20.1 118 76-194 239-359 (394)
222 KOG0252 Inorganic phosphate tr 98.6 1.2E-07 2.5E-12 84.0 6.6 135 93-227 361-502 (538)
223 PF03092 BT1: BT1 family; Int 98.6 3.2E-07 6.8E-12 84.0 9.8 148 72-223 17-175 (433)
224 PRK09584 tppB putative tripept 98.6 1.7E-06 3.7E-11 80.9 14.7 134 82-215 318-471 (500)
225 COG2270 Permeases of the major 98.5 8.7E-06 1.9E-10 71.9 17.0 227 80-335 58-305 (438)
226 PRK11462 putative transporter; 98.5 1.6E-05 3.6E-10 73.5 19.9 115 81-195 264-387 (460)
227 PF05978 UNC-93: Ion channel r 98.4 1E-05 2.3E-10 62.5 13.7 116 77-193 34-149 (156)
228 KOG3764 Vesicular amine transp 98.4 7.3E-07 1.6E-11 77.7 7.4 137 76-215 302-446 (464)
229 KOG3762 Predicted transporter 98.4 1.2E-06 2.5E-11 79.3 7.9 141 76-219 402-543 (618)
230 PRK10207 dipeptide/tripeptide 98.4 9.2E-06 2E-10 75.7 14.2 111 82-192 311-438 (489)
231 PF03209 PUCC: PUCC protein; 98.4 8.8E-05 1.9E-09 65.7 18.8 146 72-217 236-392 (403)
232 PRK15403 multidrug efflux syst 98.3 8.2E-05 1.8E-09 68.0 18.0 119 76-195 250-373 (413)
233 PF00083 Sugar_tr: Sugar (and 98.3 5.4E-09 1.2E-13 96.5 -9.6 137 88-227 294-441 (451)
234 PF06779 DUF1228: Protein of u 98.2 5.1E-06 1.1E-10 56.6 6.4 65 72-136 19-83 (85)
235 TIGR00769 AAA ADP/ATP carrier 98.2 0.00032 6.9E-09 64.4 19.9 116 79-194 42-190 (472)
236 TIGR01301 GPH_sucrose GPH fami 98.2 9E-05 1.9E-09 68.3 16.0 142 84-226 309-475 (477)
237 KOG0255 Synaptic vesicle trans 98.2 0.00013 2.8E-09 68.8 17.4 140 84-227 354-497 (521)
238 PF12832 MFS_1_like: MFS_1 lik 98.1 1E-05 2.2E-10 54.6 6.2 45 76-120 31-75 (77)
239 KOG2533 Permease of the major 98.1 3.4E-05 7.3E-10 71.3 10.9 129 76-206 305-439 (495)
240 PF06609 TRI12: Fungal trichot 98.0 0.00028 6E-09 66.4 15.2 110 81-190 350-462 (599)
241 PF06963 FPN1: Ferroportin1 (F 98.0 0.0033 7.3E-08 57.2 21.1 243 83-335 41-310 (432)
242 KOG0637 Sucrose transporter an 97.8 5.7E-05 1.2E-09 67.4 6.3 116 76-191 63-201 (498)
243 KOG2615 Permease of the major 97.7 0.00017 3.7E-09 63.0 8.7 124 72-195 289-414 (451)
244 KOG2816 Predicted transporter 97.7 0.00092 2E-08 61.5 13.6 122 72-194 269-391 (463)
245 PRK15462 dipeptide/tripeptide 97.7 0.0042 9.2E-08 57.7 17.9 113 81-193 309-438 (493)
246 KOG3098 Uncharacterized conser 97.7 0.0031 6.6E-08 57.5 15.8 107 86-193 56-162 (461)
247 PF02487 CLN3: CLN3 protein; 97.5 0.0028 6.2E-08 56.7 13.5 136 82-224 61-197 (402)
248 PTZ00207 hypothetical protein; 97.5 0.0018 3.9E-08 61.3 12.2 134 85-220 396-549 (591)
249 PF00854 PTR2: POT family; In 97.5 0.0011 2.5E-08 59.6 10.6 107 111-220 2-120 (372)
250 KOG3810 Micronutrient transpor 97.5 0.00046 1E-08 59.5 7.3 210 93-313 55-264 (433)
251 KOG4332 Predicted sugar transp 97.4 0.00069 1.5E-08 56.5 7.6 87 76-163 68-155 (454)
252 PF03092 BT1: BT1 family; Int 97.4 0.0028 6E-08 58.2 11.7 151 76-226 251-416 (433)
253 KOG3574 Acetyl-CoA transporter 97.3 0.0048 1E-07 54.2 11.9 133 35-190 41-190 (510)
254 KOG2563 Permease of the major 97.1 0.0041 9E-08 55.8 9.3 150 76-225 297-452 (480)
255 PRK03612 spermidine synthase; 97.0 0.15 3.3E-06 47.9 20.0 116 76-193 46-169 (521)
256 PF06963 FPN1: Ferroportin1 (F 97.0 0.027 5.8E-07 51.4 14.4 115 76-190 289-413 (432)
257 PF02487 CLN3: CLN3 protein; 96.9 0.019 4.2E-07 51.5 12.1 114 79-194 280-396 (402)
258 COG3104 PTR2 Dipeptide/tripept 96.6 0.13 2.8E-06 47.1 14.9 111 80-190 324-451 (498)
259 PF03219 TLC: TLC ATP/ADP tran 96.6 0.67 1.4E-05 43.2 23.9 117 78-194 56-205 (491)
260 KOG3098 Uncharacterized conser 96.5 0.43 9.4E-06 43.8 17.7 106 83-189 282-408 (461)
261 COG3202 ATP/ADP translocase [E 96.3 0.84 1.8E-05 42.0 22.7 118 78-195 59-210 (509)
262 KOG1330 Sugar transporter/spin 96.3 0.022 4.9E-07 51.4 8.1 120 76-195 279-412 (493)
263 KOG1237 H+/oligopeptide sympor 96.2 0.26 5.6E-06 46.9 15.5 140 76-218 69-240 (571)
264 TIGR00939 2a57 Equilibrative N 96.2 0.14 3.1E-06 47.0 13.3 135 88-227 53-200 (437)
265 PF13000 Acatn: Acetyl-coenzym 95.6 0.11 2.3E-06 47.7 9.6 50 143-192 128-177 (544)
266 KOG1479 Nucleoside transporter 95.6 1.6 3.4E-05 39.3 16.7 93 132-227 116-208 (406)
267 KOG3762 Predicted transporter 95.5 0.029 6.4E-07 51.7 5.5 57 74-130 40-97 (618)
268 TIGR00805 oat sodium-independe 93.5 0.15 3.3E-06 49.3 5.8 51 76-126 362-415 (633)
269 KOG2325 Predicted transporter/ 93.2 0.11 2.3E-06 47.9 4.0 66 141-209 396-461 (488)
270 PF03137 OATP: Organic Anion T 90.6 0.076 1.6E-06 50.2 0.0 65 43-124 321-388 (539)
271 KOG3880 Predicted small molecu 90.5 1.3 2.7E-05 38.4 7.1 116 79-194 287-403 (409)
272 TIGR00939 2a57 Equilibrative N 90.2 12 0.00026 34.6 13.9 108 83-191 310-430 (437)
273 PF01770 Folate_carrier: Reduc 89.2 5.3 0.00011 36.3 10.4 95 82-176 287-383 (412)
274 KOG1479 Nucleoside transporter 88.5 15 0.00033 33.3 12.7 106 82-188 284-398 (406)
275 PF12832 MFS_1_like: MFS_1 lik 87.7 1.1 2.4E-05 30.0 4.1 44 292-335 9-52 (77)
276 TIGR00806 rfc RFC reduced fola 87.4 3.5 7.5E-05 38.4 8.2 95 83-177 301-397 (511)
277 COG4262 Predicted spermidine s 85.2 27 0.00058 31.1 11.9 85 76-160 39-132 (508)
278 KOG3097 Predicted membrane pro 84.3 5.3 0.00012 35.0 7.3 105 88-193 66-185 (390)
279 COG5336 Uncharacterized protei 83.2 6.2 0.00014 28.0 6.0 38 83-120 45-83 (116)
280 KOG0637 Sucrose transporter an 81.4 1.2 2.6E-05 40.7 2.5 115 83-197 335-472 (498)
281 KOG3810 Micronutrient transpor 78.6 7.4 0.00016 34.5 6.3 95 83-177 274-370 (433)
282 PF07672 MFS_Mycoplasma: Mycop 78.5 40 0.00088 28.6 11.0 102 83-185 144-255 (267)
283 TIGR00769 AAA ADP/ATP carrier 75.8 70 0.0015 29.9 16.1 73 139-214 272-345 (472)
284 KOG3880 Predicted small molecu 75.7 2.7 5.8E-05 36.5 2.8 135 82-222 64-199 (409)
285 PF11947 DUF3464: Protein of u 74.2 28 0.00061 26.8 7.7 80 102-184 56-145 (153)
286 KOG4332 Predicted sugar transp 73.7 42 0.0009 28.9 9.2 99 82-180 284-391 (454)
287 PF01733 Nucleoside_tran: Nucl 73.6 1.1 2.3E-05 39.3 0.0 25 141-166 5-29 (309)
288 PF07672 MFS_Mycoplasma: Mycop 73.4 3 6.5E-05 35.2 2.6 56 165-220 2-59 (267)
289 PF11085 YqhR: Conserved membr 72.9 43 0.00094 26.2 11.1 71 79-149 65-150 (173)
290 KOG3626 Organic anion transpor 71.6 9.1 0.0002 37.5 5.6 66 44-126 409-477 (735)
291 PF01733 Nucleoside_tran: Nucl 70.2 1.7 3.7E-05 38.0 0.5 106 84-189 186-304 (309)
292 KOG3312 Predicted membrane pro 63.6 18 0.00039 27.3 4.5 31 219-249 27-57 (186)
293 PF02632 BioY: BioY family; I 62.8 59 0.0013 24.9 7.5 26 86-111 59-84 (148)
294 PF11299 DUF3100: Protein of u 62.1 16 0.00034 30.2 4.4 99 71-191 130-228 (241)
295 PF03219 TLC: TLC ATP/ADP tran 61.6 1.5E+02 0.0032 28.0 16.3 71 138-211 287-358 (491)
296 PRK10263 DNA translocase FtsK; 61.4 1.7E+02 0.0037 31.2 12.3 20 90-109 62-81 (1355)
297 TIGR00880 2_A_01_02 Multidrug 61.0 34 0.00074 24.7 6.1 45 80-124 87-131 (141)
298 PF06912 DUF1275: Protein of u 59.8 93 0.002 25.2 15.0 42 83-124 49-93 (209)
299 PF13000 Acatn: Acetyl-coenzym 57.5 76 0.0016 29.9 8.4 46 137-182 409-454 (544)
300 PF03596 Cad: Cadmium resistan 56.4 37 0.00081 27.3 5.7 12 100-111 155-166 (191)
301 PF02694 UPF0060: Uncharacteri 55.9 29 0.00063 24.7 4.4 50 80-129 54-103 (107)
302 COG1268 BioY Uncharacterized c 52.2 73 0.0016 25.5 6.6 24 86-109 88-111 (184)
303 KOG1237 H+/oligopeptide sympor 51.9 53 0.0011 31.6 6.9 65 132-196 457-521 (571)
304 PRK02237 hypothetical protein; 51.1 50 0.0011 23.6 4.9 50 80-129 56-105 (109)
305 PF07857 DUF1632: CEO family ( 49.6 68 0.0015 27.2 6.4 17 206-222 119-135 (254)
306 TIGR00926 2A1704 Peptide:H+ sy 48.7 1.2E+02 0.0026 29.8 8.9 60 133-192 565-624 (654)
307 PRK11469 hypothetical protein; 42.6 1.8E+02 0.0038 23.4 8.8 32 94-125 149-180 (188)
308 COG4769 Predicted membrane pro 39.4 64 0.0014 25.1 4.3 49 91-145 84-132 (181)
309 PRK03612 spermidine synthase; 39.4 3.5E+02 0.0075 25.8 14.7 34 79-112 53-86 (521)
310 PRK14229 camphor resistance pr 39.1 1.5E+02 0.0031 21.4 8.4 22 142-163 58-79 (108)
311 PF02990 EMP70: Endomembrane p 37.1 1.3E+02 0.0029 28.5 7.1 43 162-204 290-332 (521)
312 TIGR02230 ATPase_gene1 F0F1-AT 35.5 1.6E+02 0.0035 20.9 6.3 33 91-123 53-86 (100)
313 TIGR00844 c_cpa1 na(+)/h(+) an 33.9 5.2E+02 0.011 26.2 12.0 46 78-123 7-52 (810)
314 PF03547 Mem_trans: Membrane t 33.1 1.2E+02 0.0026 27.3 5.9 15 93-107 8-22 (385)
315 TIGR03644 marine_trans_1 proba 32.8 3.9E+02 0.0085 24.5 12.8 47 142-189 298-344 (404)
316 KOG4255 Uncharacterized conser 31.7 3.5E+02 0.0075 24.2 7.9 54 111-164 80-143 (439)
317 PF10785 NADH-u_ox-rdase: NADH 31.4 1.7E+02 0.0038 20.0 5.7 41 92-132 30-77 (86)
318 PF04281 Tom22: Mitochondrial 31.3 1.5E+02 0.0033 22.4 5.1 26 157-182 59-84 (137)
319 PF11298 DUF3099: Protein of u 31.0 1.6E+02 0.0034 19.6 4.6 32 102-133 9-40 (73)
320 COG3619 Predicted membrane pro 30.2 3.2E+02 0.007 22.7 16.5 29 81-109 56-84 (226)
321 PF01405 PsbT: Photosystem II 29.9 87 0.0019 16.4 2.5 10 218-227 19-28 (29)
322 KOG2927 Membrane component of 29.6 60 0.0013 28.6 3.1 29 161-192 209-237 (372)
323 PF11990 DUF3487: Protein of u 28.8 2.4E+02 0.0052 20.8 6.5 28 76-103 20-47 (121)
324 PF00909 Ammonium_transp: Ammo 28.2 4.6E+02 0.01 23.9 13.4 50 141-190 278-327 (399)
325 KOG3574 Acetyl-CoA transporter 27.3 2.9E+02 0.0064 25.4 6.9 59 136-194 372-430 (510)
326 PRK14230 camphor resistance pr 26.9 2.6E+02 0.0056 20.5 8.4 23 140-162 60-82 (119)
327 PF11833 DUF3353: Protein of u 26.8 3.4E+02 0.0074 21.9 7.0 28 167-194 139-166 (194)
328 PRK11588 hypothetical protein; 26.0 5.8E+02 0.012 24.3 13.1 33 101-133 137-171 (506)
329 PRK11875 psbT photosystem II r 25.8 1.1E+02 0.0024 16.3 2.5 10 218-227 19-28 (31)
330 TIGR00986 3a0801s05tom22 mitoc 25.8 1.8E+02 0.0038 22.2 4.6 25 157-181 57-81 (145)
331 COG2119 Predicted membrane pro 25.6 2.9E+02 0.0062 22.2 5.9 38 87-124 141-178 (190)
332 PLN02332 membrane bound O-acyl 25.5 5.2E+02 0.011 24.2 8.8 31 108-138 339-369 (465)
333 TIGR01667 YCCS_YHJK integral m 25.3 6.9E+02 0.015 24.9 11.0 50 100-149 43-97 (701)
334 PF12805 FUSC-like: FUSC-like 24.5 4.5E+02 0.0098 22.5 11.9 35 115-149 4-39 (284)
335 COG1422 Predicted membrane pro 24.2 3.9E+02 0.0085 21.7 7.9 11 179-189 32-42 (201)
336 PF13493 DUF4118: Domain of un 23.8 1.3E+02 0.0027 21.1 3.6 25 86-110 81-105 (105)
337 KOG3097 Predicted membrane pro 23.4 1.4E+02 0.0031 26.6 4.3 74 76-149 306-383 (390)
338 CHL00031 psbT photosystem II p 23.0 1.3E+02 0.0027 16.4 2.4 10 218-227 19-28 (33)
339 COG1480 Predicted membrane-ass 22.8 7.5E+02 0.016 24.5 9.2 35 93-127 383-417 (700)
340 PRK10692 hypothetical protein; 21.8 2.7E+02 0.006 19.0 5.1 17 109-125 3-19 (92)
341 COG3086 RseC Positive regulato 20.7 3.9E+02 0.0085 20.4 7.0 44 72-115 64-107 (150)
342 PF07456 Hpre_diP_synt_I: Hept 20.3 4.1E+02 0.0088 20.4 6.3 51 86-142 67-117 (148)
343 PF13940 Ldr_toxin: Toxin Ldr, 20.3 1.7E+02 0.0036 16.0 2.7 20 87-106 15-34 (35)
344 TIGR03173 pbuX xanthine permea 20.2 4.3E+02 0.0094 24.1 7.1 92 76-168 24-116 (406)
No 1
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.98 E-value=5.9e-30 Score=229.62 Aligned_cols=313 Identities=30% Similarity=0.539 Sum_probs=250.6
Q ss_pred CCCCchHHHHHHHHHHHHHHHHhhhccccccccchhhHHhhhccchhhhcccCCCCcccccCCCchhHHHHHHHHHHHHH
Q 043735 16 PGKLTPFVTVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKRFFPSVYRKQQANSSTNQYCQYNSETLTLFTSSLYLAALL 95 (336)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i 95 (336)
+++..++....+..++++.+.+||+.+..+.. -...++++.+.+.++++.+.-++.+ +...+.+.+++.+|.++
T Consensus 2 ~~~~t~~L~~~~~~~~~gsf~~Gy~~~~iNap---~~~i~~f~n~t~~~r~g~~~s~~~~---~~lwS~~vs~f~iG~~~ 75 (485)
T KOG0569|consen 2 KPKLTRRLLLAVIVATLGSFQFGYNIGVVNAP---QELIKSFINETLIERYGLPLSDSTL---DLLWSLIVSIFFIGGMI 75 (485)
T ss_pred CCCccHHHHHHHHHHHHhchhhhhhheecCch---HHHHHHHHHHHHHHhcCCCCChHHH---HHHHHHHHHHHHHHHHH
Confidence 34566777888888888889999999887533 3566677666665554322222211 22357889999999999
Q ss_pred HHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHhhhhhhhhhhHHHHhhhcCCCccchhHHH
Q 043735 96 SSLVASSVTRKFGRKKSMLFGGVLFFAGALINGF---AQGVWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYKYRGALNI 172 (336)
Q Consensus 96 ~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~---~~~~~~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 172 (336)
|++..|+++||+|||..+.++.++..++.++..+ .+++.+++++|++.|+..|......+.++.|..|++.||....
T Consensus 76 Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~ 155 (485)
T KOG0569|consen 76 GSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGT 155 (485)
T ss_pred HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHH
Confidence 9999999999999999999999888888877665 4678999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCCChHHHHh-cCChHHHHHHHHHHcCCCcc
Q 043735 173 GFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPDTPNSMIE-RGQRDEAREKLRKIRGVNDV 251 (336)
Q Consensus 173 ~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 251 (336)
..+.+..+|..++..++..-. ......|++.+....+++++..+...++||+|||+.. ++++++|++.++..++++++
T Consensus 156 ~~~~~~~~g~ll~~~~~l~~i-lGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~ 234 (485)
T KOG0569|consen 156 LLQIGVVIGILLGQVLGLPSL-LGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDV 234 (485)
T ss_pred HHHHHHHHHHHHHHHHccHHh-cCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcc
Confidence 999999999999976653222 1113469999999999999988888999999999987 78999999999999999876
Q ss_pred hHHHHHHHHHHHh---ccccccchhhhccc-cchhHHHHHHHHHHHHHhhchhHHHHcHHHHHHhcCCCCcHHHHHHHHH
Q 043735 252 DEEFNDLVAASEA---SKQVEHPWGNLLKR-KYRPHLTMAILIPFFQQLTGINVIMFYAPVLFNTIGFGNDASLMSAVIT 327 (336)
Q Consensus 252 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~~~~~~~~~ 327 (336)
+++.++..++.++ +++++.+.++++++ ..++...+.+.+....++.+.+...+|...++++.|++.+++.+++...
T Consensus 235 ~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~ 314 (485)
T KOG0569|consen 235 EAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGI 314 (485)
T ss_pred hhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 6665544333322 22356778899885 4555566777777888999999999999999999999999999999888
Q ss_pred hHhhheec
Q 043735 328 GLVNACAT 335 (336)
Q Consensus 328 ~~~~~~~~ 335 (336)
++.+++.+
T Consensus 315 g~v~~~~t 322 (485)
T KOG0569|consen 315 GIVNLLST 322 (485)
T ss_pred HHHHHHHH
Confidence 88877654
No 2
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.97 E-value=1.6e-27 Score=221.30 Aligned_cols=299 Identities=28% Similarity=0.548 Sum_probs=212.9
Q ss_pred CchHHHHHHHHHHHHHHHHhhhccccccccchhhHHhhhccchhhhcccCCCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 043735 19 LTPFVTVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKRFFPSVYRKQQANSSTNQYCQYNSETLTLFTSSLYLAALLSSL 98 (336)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~ 98 (336)
..+++...+.++.++.+.++|+...++.. .|.+.+.+. ++...+++.+..+.+++.+.+.++..++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~----------~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~ 73 (479)
T PRK10077 6 NSSYIFSITLVATLGGLLFGYDTAVISGT--VESLNTVFV----------APQNLSESAANSLLGFCVASALIGCIIGGA 73 (479)
T ss_pred cchHHHHHHHHHHHHHHhcCcccceehHh--HHHHHHHhc----------ccccccccCChhHHHHHHHHHHHHHHHHHH
Confidence 34556667777778889999999887754 366666664 334556689999999999999999999999
Q ss_pred HhHHhhhhhchhHHHHHHHHHHHHHHHHHHhh------------hhHHHHHHHHHHHhhhhhhhhhhHHHHhhhcCCCcc
Q 043735 99 VASSVTRKFGRKKSMLFGGVLFFAGALINGFA------------QGVWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYKY 166 (336)
Q Consensus 99 ~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~------------~~~~~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~ 166 (336)
++|+++||+|||++++.+.++.+++.+.+++. +.++.+++.|+++|++.|..++....+++|++|+++
T Consensus 74 ~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~ 153 (479)
T PRK10077 74 LGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHI 153 (479)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhh
Confidence 99999999999999999999999888877652 235678899999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhcc-----cCCchhHHHHhhhHHHHHHHHHhhcccCCChHHHHhcCChHHHHHH
Q 043735 167 RGALNIGFQLSITIGILIANVLNYFFAKI-----KGGWGWRLSLGGAMVPALIITIGSLVLPDTPNSMIERGQRDEAREK 241 (336)
Q Consensus 167 r~~~~~~~~~~~~~g~~~~~~l~~~~~~~-----~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 241 (336)
|++++++.+.+..+|..+++.++..+... ...++||+.|++.+++.++..+..+++||+|+++..+++.+++++.
T Consensus 154 rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~ 233 (479)
T PRK10077 154 RGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGI 233 (479)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHH
Confidence 99999999999999999988777655421 1246899999988777776666667899999988777776666555
Q ss_pred HHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHcHHHHHHhcCCCCcHHH
Q 043735 242 LRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPVLFNTIGFGNDASL 321 (336)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~~~ 321 (336)
.++..+.++.+...++.++..+.+.. ..+..+. ..............+....+++...++.|.+.++.|++...+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~ 309 (479)
T PRK10077 234 LRKIMGNTLATQALQEIKHSLDHGRK---TGGKLLM-FGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGASTDIAL 309 (479)
T ss_pred HHHHcCChhHHHHHHHHHHHHHHhhh---hhhhhcc-hhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCCCCchHH
Confidence 55544333222222222111111110 0111111 1111112222223344455566677888999999999887777
Q ss_pred HHHHHHhHhhhe
Q 043735 322 MSAVITGLVNAC 333 (336)
Q Consensus 322 ~~~~~~~~~~~~ 333 (336)
+.....++..++
T Consensus 310 ~~~~~~~~~~~i 321 (479)
T PRK10077 310 LQTIIVGVINLT 321 (479)
T ss_pred HHHHHHHHHHHH
Confidence 666655555444
No 3
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.97 E-value=1.4e-28 Score=229.29 Aligned_cols=288 Identities=19% Similarity=0.251 Sum_probs=206.7
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHhhhccccccccchhhHHhhhccchhhhcccCCCCcccccCCCchhHHHHHHHHHHHH
Q 043735 15 YPGKLTPFVTVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKRFFPSVYRKQQANSSTNQYCQYNSETLTLFTSSLYLAAL 94 (336)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 94 (336)
++.+..++++..+.++.++.+.+||+....+... |.+.+++. ..+.+.+..+.+++.+...++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~--~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~ig~~ 70 (502)
T TIGR00887 6 DTAPFGWQHFRAIVIAGVGFFTDSYDLFCISLVT--KMLGYVYY-------------HGKGPLPSSVSAAVNGSASIGTL 70 (502)
T ss_pred hccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhc-------------cCcccchHHHHHHHHHHHHHHHH
Confidence 3456667788888888999999999998876553 33322211 01124566778999999999999
Q ss_pred HHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhh------HHHHHHHHHHHhhhhhhhhhhHHHHhhhcCCCccch
Q 043735 95 LSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQG------VWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYKYRG 168 (336)
Q Consensus 95 i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~------~~~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~r~ 168 (336)
++++++|+++||+|||+++.++.++..++.++++++++ ++.++++|++.|++.|...+....++.|++|+++|+
T Consensus 71 ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg 150 (502)
T TIGR00887 71 AGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRG 150 (502)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHH
Confidence 99999999999999999999999999999988887765 688999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcc--------------------cCCchhHHHHhhhHHHHHHHHHhhcccCCChHH
Q 043735 169 ALNIGFQLSITIGILIANVLNYFFAKI--------------------KGGWGWRLSLGGAMVPALIITIGSLVLPDTPNS 228 (336)
Q Consensus 169 ~~~~~~~~~~~~g~~~~~~l~~~~~~~--------------------~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~ 228 (336)
++.++.+....+|..+++.+...+... ..+++||+.+.+.++++++..+..+++||+|+|
T Consensus 151 ~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~ 230 (502)
T TIGR00887 151 AMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRY 230 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHH
Confidence 999999999999999998887765321 012579999998888888777777889999999
Q ss_pred HHhcCChH-HHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccc---hhHHHHHHHHHHHHHhhchhHHHH
Q 043735 229 MIERGQRD-EAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKY---RPHLTMAILIPFFQQLTGINVIMF 304 (336)
Q Consensus 229 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 304 (336)
+..+++++ ++.+.+.+....+..+. .++.++..+++++.+.++++++++.. ..+..+.....+++....++....
T Consensus 231 l~~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~ 309 (502)
T TIGR00887 231 TADVAKDVEQAASDMSAVLQVKIEAE-PDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNL 309 (502)
T ss_pred HHHhCcchHHHHHHHHHHhccccccC-cccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 98776654 35555554433221110 11111000111111235777765322 112233333333334445567778
Q ss_pred cHHHHHHhcCCCCc
Q 043735 305 YAPVLFNTIGFGND 318 (336)
Q Consensus 305 ~~~~~~~~~G~s~~ 318 (336)
|.|.++++.|++..
T Consensus 310 ~~p~i~~~~G~~~~ 323 (502)
T TIGR00887 310 NQKVILSAIGYSPP 323 (502)
T ss_pred ccHHHHHHHcCCCC
Confidence 89999988898754
No 4
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=4.3e-27 Score=219.50 Aligned_cols=302 Identities=40% Similarity=0.720 Sum_probs=233.3
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHhhhccccccccchhhHHhhhccchhhhcccCCCCcccccCCC--chhHHHHHHHHHH
Q 043735 15 YPGKLTPFVTVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKRFFPSVYRKQQANSSTNQYCQYNS--ETLTLFTSSLYLA 92 (336)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~~~~~~~~~~ 92 (336)
++.+........+..+.++.+.+||+ +..+....+....++..... +...+. .+.+++.+...++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~fg~~-g~~g~~s~~~~~~~~~~~~~------------~~~~~~~~~~~s~~~s~~~lg 101 (513)
T KOG0254|consen 35 KPTMISPFVILLALVAALGGLLFGYD-GDIGGISGALDFLQRFASLY------------DLSTGEYSVRQGLLTSILNLG 101 (513)
T ss_pred ccccCceehHHHHHHHHHHHHHhCcc-cccccchhhHHHHHhccccc------------ccccchhHHHHHHHHHHHHHH
Confidence 34455567788888888999999998 43333333333333321110 001112 4569999999999
Q ss_pred HHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHhhhcCCCccchhHHH
Q 043735 93 ALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYKYRGALNI 172 (336)
Q Consensus 93 ~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 172 (336)
..++++++|+++|++|||+.++++.+++.++.+++++++++.+++++|++.|+|.|....+.+.+++|..|++.||...+
T Consensus 102 a~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~ 181 (513)
T KOG0254|consen 102 ALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVS 181 (513)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCCChHHHHhcCChHHHHHHHHHHcC--CCc
Q 043735 173 GFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPDTPNSMIERGQRDEAREKLRKIRG--VND 250 (336)
Q Consensus 173 ~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~--~~~ 250 (336)
..+....+|..++..++....+. . ++||..+.+..+++++..+..+++||+|+|+..+++.+++++.+.+.++ +.+
T Consensus 182 ~~~l~~~~Gi~~~~~~~~~~~~~-~-~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~ 259 (513)
T KOG0254|consen 182 LYQLFITIGILLGYCINYGTSKV-Y-AGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPED 259 (513)
T ss_pred HHHHHHHHHHHHHHHHhhhhccC-C-ccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcc
Confidence 99999999988885555554432 1 5799999999999888888888899999999999999999999998888 334
Q ss_pred chHHHHHHHHHHHhc---cccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHcHHHHHHhcCCCCcHHHHHHHHH
Q 043735 251 VDEEFNDLVAASEAS---KQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPVLFNTIGFGNDASLMSAVIT 327 (336)
Q Consensus 251 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~~~~~~~~~ 327 (336)
.+.+.++.+.+...+ .+.+..+.+++++...++..+...+..+.++.+++...+|.+.+++..|++... .....+.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~ 338 (513)
T KOG0254|consen 260 VEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIIL 338 (513)
T ss_pred hHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHH
Confidence 444444444222111 122224667777667777888888899999999999999999999999987654 3444444
Q ss_pred hHhhh
Q 043735 328 GLVNA 332 (336)
Q Consensus 328 ~~~~~ 332 (336)
++..+
T Consensus 339 ~~v~~ 343 (513)
T KOG0254|consen 339 GVVNF 343 (513)
T ss_pred HHHHH
Confidence 44443
No 5
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.96 E-value=4.8e-27 Score=223.53 Aligned_cols=272 Identities=21% Similarity=0.252 Sum_probs=211.6
Q ss_pred chHHHHHHHHHHHHHHHHhhhccccccccchhhHHhhhccchhhhcccCCCCcccccCCCchhHHHHHHHHHHHHHHHHH
Q 043735 20 TPFVTVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKRFFPSVYRKQQANSSTNQYCQYNSETLTLFTSSLYLAALLSSLV 99 (336)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~ 99 (336)
.+++|.+.+++.++.+.++++...++.. +|.+.+++ |++..+.+++.++.+++.++++++
T Consensus 162 ~~~~~~l~~i~~l~~~~~g~d~~~is~i--lp~i~~~~------------------gls~~~~g~l~s~~~lG~iiG~li 221 (742)
T TIGR01299 162 GRFQWALFFVLGLALMADGVEVFVVGFV--LPSAEKDL------------------CIPDSGKGMLGLIVYLGMMVGAFF 221 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHh------------------CCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777777788888888888765533 45554444 889999999999999999999999
Q ss_pred hHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHhhhcCCCccchhHHHHHHHHHH
Q 043735 100 ASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYKYRGALNIGFQLSIT 179 (336)
Q Consensus 100 ~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 179 (336)
+|+++||+|||+++++++++.+++.++++++++++.++++|++.|++.|+..+....++.|++|+++|++..+++..+..
T Consensus 222 ~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~ 301 (742)
T TIGR01299 222 WGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWM 301 (742)
T ss_pred HHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccC----------CchhHHHHhhhHHHHHHHHHhhcccCCChHHHHhcCChHHHHHHHHHHcCCC
Q 043735 180 IGILIANVLNYFFAKIKG----------GWGWRLSLGGAMVPALIITIGSLVLPDTPNSMIERGQRDEAREKLRKIRGVN 249 (336)
Q Consensus 180 ~g~~~~~~l~~~~~~~~~----------~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (336)
+|.++++.++..+....+ ..+||+.+++.+++.++.++..+++||+|+|+..+++.+++.+.++++...+
T Consensus 302 iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n 381 (742)
T TIGR01299 302 IGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTN 381 (742)
T ss_pred HHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCC
Confidence 999999988766654211 1379999998888877777777889999999999999999999888887655
Q ss_pred cch----H-H--HHHHHHHHHh----c-cccc-------------------cchhhhccccchhHHHHHHHHHHHHHhhc
Q 043735 250 DVD----E-E--FNDLVAASEA----S-KQVE-------------------HPWGNLLKRKYRPHLTMAILIPFFQQLTG 298 (336)
Q Consensus 250 ~~~----~-~--~~~~~~~~~~----~-~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (336)
... . . .++.+..... + ++.. .+++++++++.++++++ +.+.+++...+
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~-l~~~wf~~~~~ 460 (742)
T TIGR01299 382 MRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIK-LMGVWFTLSFG 460 (742)
T ss_pred CCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHH-HHHHHHHHHHH
Confidence 321 1 1 0111110000 0 0000 12445566655555444 44456666668
Q ss_pred hhHHHHcHHHHHHh
Q 043735 299 INVIMFYAPVLFNT 312 (336)
Q Consensus 299 ~~~~~~~~~~~~~~ 312 (336)
++++..|+|.++++
T Consensus 461 yygl~~w~P~~~~~ 474 (742)
T TIGR01299 461 YYGLSVWFPDMIKH 474 (742)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998754
No 6
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.96 E-value=1.4e-26 Score=214.17 Aligned_cols=305 Identities=37% Similarity=0.665 Sum_probs=212.9
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHhhhccccccccchhhHHhhhccchhhhcccCCCCcccccCCCchhHHHHHHHHHHHH
Q 043735 15 YPGKLTPFVTVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKRFFPSVYRKQQANSSTNQYCQYNSETLTLFTSSLYLAAL 94 (336)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 94 (336)
...+..|+.+..+.++.++.+..+++...++... |....++.- .. ..+-+.+..+.+++.+++.++..
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--------~~--~~~~~~~~~~~~~~~~~~~~~~~ 85 (481)
T TIGR00879 18 GLGSTYWKVALLSLIAAIGGLMFGYDTGVIGGAL--ALPAFEFKF--------TS--ANSDSYSSSLWGLVVSIFLVGGF 85 (481)
T ss_pred CCCcccHHHHHHHHHHHHHHHhcccccchhhhhh--hcHHHHHhc--------CC--cccCCCChhHHHHHHHHHHHHHH
Confidence 3344556666677777777788888877765443 333333210 00 11114678999999999999999
Q ss_pred HHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhh---hHHHHHHHHHHHhhhhhhhhhhHHHHhhhcCCCccchhHH
Q 043735 95 LSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQ---GVWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYKYRGALN 171 (336)
Q Consensus 95 i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~---~~~~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~ 171 (336)
++++++|+++||+|||+++..+.++..++.+++.+.. +++.+++.|++.|++.+...+....++.|++|+++|+++.
T Consensus 86 i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~ 165 (481)
T TIGR00879 86 IGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALT 165 (481)
T ss_pred HHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhh
Confidence 9999999999999999999999999999998885543 4558999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH---HHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCCChHHHHhcCChHHHHHHHHHHcCC
Q 043735 172 IGFQLSITIGILIANVLN---YFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPDTPNSMIERGQRDEAREKLRKIRGV 248 (336)
Q Consensus 172 ~~~~~~~~~g~~~~~~l~---~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 248 (336)
++++.+..+|..+++.++ ....+ ..+||+.|++.++..++..+..+++||+|++...+++.+++++..++....
T Consensus 166 ~~~~~~~~~G~~~~~~~~~~~~~~~~---~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (481)
T TIGR00879 166 SLYQLAITFGILVAYGFGSGKVSLNN---TLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGT 242 (481)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCC---CccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCC
Confidence 999999999999999988 44333 358999999876666666666678899988776666655555544443333
Q ss_pred CcchHHHHH----HHH-HHHhccccccchhhhcccc--chhHHHHHHHHHHHHHhhchhHHHHcHHHHHHhcCCCCcHHH
Q 043735 249 NDVDEEFND----LVA-ASEASKQVEHPWGNLLKRK--YRPHLTMAILIPFFQQLTGINVIMFYAPVLFNTIGFGNDASL 321 (336)
Q Consensus 249 ~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~~~ 321 (336)
++.+.+..+ .+. ...+.+..+.++.+.++.. ..++.++...+..+..........++.|.+.++.|++..+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 322 (481)
T TIGR00879 243 SGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAF 322 (481)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHH
Confidence 222111111 000 0011111122244444322 234555555555555555566678888999999999998888
Q ss_pred HHHHHHhHhhhee
Q 043735 322 MSAVITGLVNACA 334 (336)
Q Consensus 322 ~~~~~~~~~~~~~ 334 (336)
....+..+..+++
T Consensus 323 ~~~~~~~~~~~~~ 335 (481)
T TIGR00879 323 LVSIIVGAVNFAF 335 (481)
T ss_pred HHHHHHHHHHHHH
Confidence 7777777666554
No 7
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.95 E-value=1.5e-26 Score=210.35 Aligned_cols=257 Identities=16% Similarity=0.215 Sum_probs=181.8
Q ss_pred CcccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhh
Q 043735 71 TNQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFA 150 (336)
Q Consensus 71 ~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~ 150 (336)
+++++|+|.++.+++.+++.+++.+++++.|+++||+|||+++..+.++..+++++++++++++.+++.|++.|++.+..
T Consensus 34 l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 113 (412)
T TIGR02332 34 MGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGPESLYLLRILVGIAEAGF 113 (412)
T ss_pred hHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhH
Confidence 35566999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcc---cCCchhHHHHhhhHHHHHHHHH-hhcccCCCh
Q 043735 151 NQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKI---KGGWGWRLSLGGAMVPALIITI-GSLVLPDTP 226 (336)
Q Consensus 151 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~---~~~~~w~~~~~~~~~~~~~~~~-~~~~~~e~~ 226 (336)
.+....++.|++|+++|++++++++.+..+|..+++++++.+.+. .+..|||+.|++.+++.++..+ ..+++||+|
T Consensus 114 ~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p 193 (412)
T TIGR02332 114 LPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSP 193 (412)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCc
Confidence 999989999999999999999999999999999999999887642 1235899999988777665444 446778887
Q ss_pred HHHHhcCChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHcH
Q 043735 227 NSMIERGQRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYA 306 (336)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (336)
+.... .++++.+...+..+......++.+ +.. ++.+..+++.+++...+. ++...+.+++....++.+..|.
T Consensus 194 ~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 265 (412)
T TIGR02332 194 DKAKW-LDEEDKKALKEMIDNDQLTLEQPE---GAF---AHAAMPQRSMLREIFTPA-IMLYTLAYFCLTNTLSAINIWT 265 (412)
T ss_pred ccCCC-CCHHHHHHHHHHHHhccccccccc---ccc---ccccccHHHHHHHhcChH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 42100 001111111111110000000000 000 000111111122222223 4444555556666677888999
Q ss_pred HHHHHhc--CCCCcHHHHHHHHHhHhhheec
Q 043735 307 PVLFNTI--GFGNDASLMSAVITGLVNACAT 335 (336)
Q Consensus 307 ~~~~~~~--G~s~~~~~~~~~~~~~~~~~~~ 335 (336)
|.++++. |++..+++.......+..+++.
T Consensus 266 p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~ 296 (412)
T TIGR02332 266 PQILQSFNQGSSNIMIGLLAAIPQFCTIFGM 296 (412)
T ss_pred HHHHHhcCCCCcHHHhHHHhhHHHHHHHHHH
Confidence 9999874 6777787877777777666543
No 8
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.95 E-value=2.6e-27 Score=204.28 Aligned_cols=245 Identities=18% Similarity=0.175 Sum_probs=197.9
Q ss_pred cccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhh
Q 043735 72 NQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFAN 151 (336)
Q Consensus 72 ~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~ 151 (336)
.++.++|.+|.|++.+.+++.+.++..+.|.++||.+.|+.+..++++.++++++++++++.+.+.++.+++|+..|...
T Consensus 56 ~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gw 135 (448)
T COG2271 56 IEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGW 135 (448)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC
Confidence 34448999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHH--HHhhcccCCchhHHHHhhhHHHHHHHHHhh-cccCCChHH
Q 043735 152 QSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLN--YFFAKIKGGWGWRLSLGGAMVPALIITIGS-LVLPDTPNS 228 (336)
Q Consensus 152 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~--~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~e~~~~ 228 (336)
|.+..++..|+|+++||+..++++++.++|+.+.|++. +++.. +.+||..|++.++++++..++. +..+|+|+.
T Consensus 136 pp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~---~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs 212 (448)
T COG2271 136 PPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAF---HGGWRAAFYFPGIIAIIVALILLFLLRDRPQS 212 (448)
T ss_pred cHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHh---ccchhHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 99999999999999999999999999999999999998 66665 3479999999888877666655 567888842
Q ss_pred HHhcCChHHHHHHHHHHcCCCcchHHHHHHHHH-HHhccccccchhhhc-cccchhHHHHHHHHHHHHHhhchhHHHHcH
Q 043735 229 MIERGQRDEAREKLRKIRGVNDVDEEFNDLVAA-SEASKQVEHPWGNLL-KRKYRPHLTMAILIPFFQQLTGINVIMFYA 306 (336)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (336)
.-- ++.++..++..+. +++++.+..+.++++ +....++..|.+++...+....-++++.|.
T Consensus 213 ~GL-----------------P~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~ 275 (448)
T COG2271 213 EGL-----------------PPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWG 275 (448)
T ss_pred cCC-----------------CCHHHhhcCchhhhhhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhH
Confidence 100 0011110010010 111111113444444 455667788888888888888899999999
Q ss_pred HHHHHh-cCCCCcHHHHHHHHHhHhhheecC
Q 043735 307 PVLFNT-IGFGNDASLMSAVITGLVNACATL 336 (336)
Q Consensus 307 ~~~~~~-~G~s~~~~~~~~~~~~~~~~~~~~ 336 (336)
|.|+.+ .|+|..++....+.+-+++++|++
T Consensus 276 p~YL~e~k~~s~~~a~~a~~lfE~agl~G~L 306 (448)
T COG2271 276 PLYLSEVKGFSLVKANWAISLFEVAGLPGTL 306 (448)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHhhHHHH
Confidence 999955 799999999999999999988763
No 9
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.95 E-value=2.7e-26 Score=200.36 Aligned_cols=227 Identities=19% Similarity=0.286 Sum_probs=183.7
Q ss_pred CCCcccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhh
Q 043735 69 SSTNQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIG 148 (336)
Q Consensus 69 ~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~ 148 (336)
|++.+++|+|..+.|++.+++.++..++.++...+.||+.||++++..+.++.++++++++++|++.+.++|++.|+..|
T Consensus 37 p~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G 116 (394)
T COG2814 37 PPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLARALAGLAHG 116 (394)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 33455559999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhh-cccCCChH
Q 043735 149 FANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGS-LVLPDTPN 227 (336)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~e~~~ 227 (336)
..++....+..+..|+++|++++++...+..++..+|.+++.++.+. +|||+.|+..+.++++..+.. ..+| |+
T Consensus 117 ~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~---~GWR~~F~~ia~l~ll~~~~~~~~lP--~~ 191 (394)
T COG2814 117 VFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQL---FGWRATFLAIAVLALLALLLLWKLLP--PS 191 (394)
T ss_pred HHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHH---hhHHHHHHHHHHHHHHHHHHHHHhCC--Cc
Confidence 99999999999999999999999999999999999999999999984 679999999888887776655 4677 21
Q ss_pred HHHhcCChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHcHH
Q 043735 228 SMIERGQRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAP 307 (336)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (336)
. .+++.+.+.++.++..++++.+.............+..+.|..|
T Consensus 192 ~-----------------------------------~~~~~~~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P 236 (394)
T COG2814 192 E-----------------------------------ISGSLPGPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRP 236 (394)
T ss_pred c-----------------------------------CCCCCCcchhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHH
Confidence 0 00111122222223233334444444444444444445555666
Q ss_pred HHHHhcCCCCcHHHHHHHHHhHhhheec
Q 043735 308 VLFNTIGFGNDASLMSAVITGLVNACAT 335 (336)
Q Consensus 308 ~~~~~~G~s~~~~~~~~~~~~~~~~~~~ 335 (336)
.+.+..|++.+..++....++++.++|+
T Consensus 237 ~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn 264 (394)
T COG2814 237 FLESVAGFSVSAVSLVLLAFGIAGFIGN 264 (394)
T ss_pred HHHHccCCCHhHHHHHHHHHHHHHHHHH
Confidence 6667789999999999999999988875
No 10
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.94 E-value=3.4e-25 Score=205.90 Aligned_cols=267 Identities=16% Similarity=0.264 Sum_probs=184.0
Q ss_pred HHHHHHHHHHHHhhhccccccccchhhHHhhhccchhhhcccCCCCcccccCCCc--hhHH--HHHHHHHHHHHHHHHhH
Q 043735 26 TCIVAAMGGLIFGYDIGISGGVTSMPSFLKRFFPSVYRKQQANSSTNQYCQYNSE--TLTL--FTSSLYLAALLSSLVAS 101 (336)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~s~~--~~~~--~~~~~~~~~~i~~~~~g 101 (336)
...++.++.+.++||...++.. .|...+.+.|+ .++. ..+. +.++.++++.+|++++|
T Consensus 17 ~~~~~~~g~~~~~~d~~~~~~~--~~~i~~~~~~~----------------~~~~~~~~~~~~~~~~~~l~~~ig~~~~G 78 (490)
T PRK10642 17 AITAASLGNAMEWFDFGVYGFV--AYALGKVFFPG----------------ADPSVQMIAALATFSVPFLIRPLGGLFFG 78 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--HHHHHHhhCCC----------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455567889999999887644 46555555321 1111 1111 25778899999999999
Q ss_pred HhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHH--------HHHHHHHHhhhhhhhhhhHHHHhhhcCCCccchhHHHH
Q 043735 102 SVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWM--------LIVGRLLLGFGIGFANQSVPLYLSEMAPYKYRGALNIG 173 (336)
Q Consensus 102 ~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~--------~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 173 (336)
+++||+|||+++.++.++++++++++++++++.. ++++|+++|++.|..++....++.|++|+++||+..++
T Consensus 79 ~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~ 158 (490)
T PRK10642 79 MLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSW 158 (490)
T ss_pred HHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHH
Confidence 9999999999999999999999999999999864 88999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccc-----CCchhHHHHhhhHHHHHHHHHhhcccCCChHHHHhcCChHHHHHHHHHHcCC
Q 043735 174 FQLSITIGILIANVLNYFFAKIK-----GGWGWRLSLGGAMVPALIITIGSLVLPDTPNSMIERGQRDEAREKLRKIRGV 248 (336)
Q Consensus 174 ~~~~~~~g~~~~~~l~~~~~~~~-----~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 248 (336)
...+..+|..+++.+...+.... .++|||+.|++.+++.++..++...+||+|++...+++.++. .
T Consensus 159 ~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~-------~-- 229 (490)
T PRK10642 159 LDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQG-------D-- 229 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhh-------c--
Confidence 99888888888876665443211 147899999987766665555556789998764221110000 0
Q ss_pred CcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHcHHHHHH-hcCCCCcHHHHHHHHH
Q 043735 249 NDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPVLFN-TIGFGNDASLMSAVIT 327 (336)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~s~~~~~~~~~~~ 327 (336)
++...++++.++++++++ ..+. +.......++....++....|.|.+++ ..|++..++.......
T Consensus 230 ------------~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~ 295 (490)
T PRK10642 230 ------------REGLQDGPKVSFKEIATK-HWRS-LLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAI 295 (490)
T ss_pred ------------cccccccccCCHHHHHHH-hHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 000001112345555543 2222 222222233334456777889999885 5799887777666655
Q ss_pred hHhhhe
Q 043735 328 GLVNAC 333 (336)
Q Consensus 328 ~~~~~~ 333 (336)
.++.++
T Consensus 296 ~~~~~~ 301 (490)
T PRK10642 296 MIGMLF 301 (490)
T ss_pred HHHHHH
Confidence 555443
No 11
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.94 E-value=1.4e-25 Score=205.36 Aligned_cols=242 Identities=14% Similarity=0.144 Sum_probs=175.6
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhh
Q 043735 74 YCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQS 153 (336)
Q Consensus 74 ~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~ 153 (336)
++|+|.++.+++.+.+.+++.+++++.|+++||+|||+++.++.++.+++++++.++++++.+++.|++.|++.|...+.
T Consensus 52 ~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~ 131 (434)
T PRK11663 52 DLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPV 131 (434)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchH
Confidence 34999999999999999999999999999999999999999999999999999999999999999999999999988899
Q ss_pred HHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHH-hhcccCCChHHHHhc
Q 043735 154 VPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITI-GSLVLPDTPNSMIER 232 (336)
Q Consensus 154 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~ 232 (336)
...++.|++|+++|++++++++.+..+|..+++.+.+.+.+ .++||+.|.+.+++.++..+ ..+++||+|++....
T Consensus 132 ~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~---~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~ 208 (434)
T PRK11663 132 CAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIAL---HYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLP 208 (434)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---cccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCC
Confidence 99999999999999999999999999999999999998876 35799999887776554433 345678876432100
Q ss_pred CChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccc-cchhHHHHHHHHHHHHHhhchhHHHHcHHHHH-
Q 043735 233 GQRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKR-KYRPHLTMAILIPFFQQLTGINVIMFYAPVLF- 310 (336)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 310 (336)
...+..+ +.+ + .+++ .++++.++++.++. ..+++.++...+..+........+..|.|.++
T Consensus 209 ~~~~~~~----------~~~----~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~ 271 (434)
T PRK11663 209 SVGEWRH----------DAL----E--LAQQ-QEGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMS 271 (434)
T ss_pred Ccccccc----------ccc----c--cchh-ccccCCChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000000 000 0 0000 00011122232221 11222233333334444444556777889888
Q ss_pred HhcCCCCcHHHHHHHHHhHhhheec
Q 043735 311 NTIGFGNDASLMSAVITGLVNACAT 335 (336)
Q Consensus 311 ~~~G~s~~~~~~~~~~~~~~~~~~~ 335 (336)
++.|++..+++...+...+++++++
T Consensus 272 ~~~g~s~~~a~~~~~~~~~~~~~g~ 296 (434)
T PRK11663 272 ETLGVDLVTANSAVSMFELGGFIGA 296 (434)
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHH
Confidence 5679999999888888877776654
No 12
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.94 E-value=9.5e-25 Score=199.90 Aligned_cols=260 Identities=19% Similarity=0.213 Sum_probs=179.7
Q ss_pred chHHHHHHHHHHHHHHHHhhhccccccccchhhHHhhhccchhhhcccCCCCcccccCCCch---hHHHHHHHHHHHHHH
Q 043735 20 TPFVTVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKRFFPSVYRKQQANSSTNQYCQYNSET---LTLFTSSLYLAALLS 96 (336)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~---~~~~~~~~~~~~~i~ 96 (336)
..+++.....+.++.+.+.||...++.. .|.+.+++.|+ +.+..+ .+.+.+..+++..++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~l~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~ig 79 (432)
T PRK10406 17 TRRRIWAIVGASSGNLVEWFDFYVYSFC--SLYFAHIFFPS---------------GNTTTQLLQTAGVFAAGFLMRPIG 79 (432)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHhCCC---------------CCchHHHHHHHHHHHHHHHHHHHH
Confidence 3344445556667778899998886544 46665665321 223333 344455566666799
Q ss_pred HHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHH--------HHHHHHHHHhhhhhhhhhhHHHHhhhcCCCccch
Q 043735 97 SLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVW--------MLIVGRLLLGFGIGFANQSVPLYLSEMAPYKYRG 168 (336)
Q Consensus 97 ~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~--------~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~r~ 168 (336)
++++|+++||+|||+++..+.++++++++.+++++++. .+++.|+++|++.|..++....++.|++|+++|+
T Consensus 80 ~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg 159 (432)
T PRK10406 80 GWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKG 159 (432)
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCccc
Confidence 99999999999999999999999999999999888763 5889999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhccc-----CCchhHHHHhhhHHHHHHHHHhhcccCCChHHHHhcCChHHHHHHHH
Q 043735 169 ALNIGFQLSITIGILIANVLNYFFAKIK-----GGWGWRLSLGGAMVPALIITIGSLVLPDTPNSMIERGQRDEAREKLR 243 (336)
Q Consensus 169 ~~~~~~~~~~~~g~~~~~~l~~~~~~~~-----~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 243 (336)
+..++...+...|..+++.+...+.... ..+|||+.|++.+++.++.......+||++++.. +
T Consensus 160 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~~--------~---- 227 (432)
T PRK10406 160 FYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQQET--------R---- 227 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCchHHH--------h----
Confidence 9999988888888888877655543221 1368999999888777665555455677653200 0
Q ss_pred HHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHcHHHHHH-hcCCCCcHHHH
Q 043735 244 KIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPVLFN-TIGFGNDASLM 322 (336)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~s~~~~~~ 322 (336)
+. +++.+++++++++ +.+.............++....|.|.++. +.|++..+++.
T Consensus 228 ------------------~~---~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~ 283 (432)
T PRK10406 228 ------------------AL---KEAGSLKGLWRNR---RAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASG 283 (432)
T ss_pred ------------------hh---cccccHHHHHhhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 00 0012345555422 22222222233323456667788998885 57999888777
Q ss_pred HHHHHhHhhh
Q 043735 323 SAVITGLVNA 332 (336)
Q Consensus 323 ~~~~~~~~~~ 332 (336)
..++..+...
T Consensus 284 ~~~i~~~~~~ 293 (432)
T PRK10406 284 IMTAALFVFM 293 (432)
T ss_pred HHHHHHHHHH
Confidence 6665555443
No 13
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.94 E-value=1.1e-24 Score=197.74 Aligned_cols=189 Identities=21% Similarity=0.282 Sum_probs=156.6
Q ss_pred CchHHHHHHHHHHHHHHHHhhhccccccccchhhHHhhhccchhhhcccCCCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 043735 19 LTPFVTVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKRFFPSVYRKQQANSSTNQYCQYNSETLTLFTSSLYLAALLSSL 98 (336)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~ 98 (336)
.+++++.....+.++.+.++++....+.. .|.+. +++|+|.++.+++.++..++..++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~------------------~~~~~s~~~~g~~~~~~~~~~~~~~~ 65 (405)
T TIGR00891 6 LTRAQWNAFSAAWLGWLLDAFDFFLVALV--LAEVA------------------GEFGLTTVDAASLISAALISRWFGAL 65 (405)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHH--HHHHH------------------HHhCCChhhHHHHHHHHHHHHHHHHH
Confidence 34455555566666667777777655433 24443 34499999999999999999999999
Q ss_pred HhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHhhhcCCCccchhHHHHHHHHH
Q 043735 99 VASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYKYRGALNIGFQLSI 178 (336)
Q Consensus 99 ~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 178 (336)
+.|+++||+|||+++..+.++.+++++++.+.++++.+++.|++.|++.+..++....++.|++|+++|+++.++.+.+.
T Consensus 66 ~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 145 (405)
T TIGR00891 66 MFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGY 145 (405)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCCChHH
Q 043735 179 TIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPDTPNS 228 (336)
Q Consensus 179 ~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~ 228 (336)
.+|..+++.+.+.+.+..+ .+||+.+++.+++.++..+....+||++++
T Consensus 146 ~~g~~~~~~l~~~l~~~~~-~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~ 194 (405)
T TIGR00891 146 AVGAVVAAQVYSLVVPVWG-DGWRALFFISILPIIFALWLRKNIPEAEDW 194 (405)
T ss_pred HHHHHHHHHHHHHHHHhcC-ccHHHHHHHHHHHHHHHHHHHHhCCCChhH
Confidence 9999999999988876432 359999987666655555555667887654
No 14
>TIGR00898 2A0119 cation transport protein.
Probab=99.93 E-value=1.7e-24 Score=202.22 Aligned_cols=220 Identities=22% Similarity=0.396 Sum_probs=174.4
Q ss_pred CCCCcccccCC---CchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHh
Q 043735 68 NSSTNQYCQYN---SETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLG 144 (336)
Q Consensus 68 ~~~~~~~~~~s---~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g 144 (336)
.+.+.+|++++ ..+.+++.+++.++..+++++.|+++||+|||++++++.++.+++.++.+++++++.+++.|++.|
T Consensus 112 ~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G 191 (505)
T TIGR00898 112 SSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVG 191 (505)
T ss_pred cccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 45678888998 889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCC
Q 043735 145 FGIGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPD 224 (336)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e 224 (336)
++.+...+....++.|++|+++|+.+.++...+..+|.++++.++..+. +||+.+++.+++.++..+..+++||
T Consensus 192 ~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~------~wr~~~~~~~i~~~~~~~~~~~~~e 265 (505)
T TIGR00898 192 MGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP------DWRWLQLAVSLPTFLFFLLSWFVPE 265 (505)
T ss_pred hhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh------HHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999998876654 3999999888887777777788999
Q ss_pred ChHHHHhcCChHHHHHHHHHHcCCCcch--HHHHHHH-HHHHhccccccchhhhccccchhHHHHHHHHHHH
Q 043735 225 TPNSMIERGQRDEAREKLRKIRGVNDVD--EEFNDLV-AASEASKQVEHPWGNLLKRKYRPHLTMAILIPFF 293 (336)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (336)
+|+|+..+++.+++.+.+++..+.+..+ .+..+.. +++..+++++.+.+++++++..+...+...+.++
T Consensus 266 sp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 337 (505)
T TIGR00898 266 SPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWF 337 (505)
T ss_pred ChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHH
Confidence 9999999888888877766554433211 1111111 1111111223466777776655554444444333
No 15
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.93 E-value=4.5e-30 Score=236.53 Aligned_cols=281 Identities=36% Similarity=0.743 Sum_probs=216.6
Q ss_pred HHHHHHHHHhhhccccccccchhhHHhhhccchhhhcccCCCCcccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhc
Q 043735 29 VAAMGGLIFGYDIGISGGVTSMPSFLKRFFPSVYRKQQANSSTNQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFG 108 (336)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~G 108 (336)
++.++.+.+||+.+.++.....+.+...+..+.. +.+.+.+..+.+++.+...++..+|++++|.++||+|
T Consensus 4 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~G 74 (451)
T PF00083_consen 4 IASLGGFLFGYDLGLIGSFASLLGFLQFFGWSSS---------ESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYG 74 (451)
T ss_pred eeHHHHHHHHHHHHHHhhHHhhhhhhhccccccc---------cccccchHHHHHHHHHHHHhhhccccccccccccccc
Confidence 3456668999999887655544433333321111 1111124456789999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhh---hHHHHHHHHHHHhhhhhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHH
Q 043735 109 RKKSMLFGGVLFFAGALINGFAQ---GVWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIA 185 (336)
Q Consensus 109 rr~~l~~~~~~~~i~~~~~~~~~---~~~~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 185 (336)
||+.+..+.++..++.++.++++ +++.+.++|++.|++.|...+....++.|..|+++|++..+..+....+|..++
T Consensus 75 Rk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~ 154 (451)
T PF00083_consen 75 RKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLA 154 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999 999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCCChHHHHhcCChHHHHHHHHHHcCCCcchHHHHHHHHHHHhc
Q 043735 186 NVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPDTPNSMIERGQRDEAREKLRKIRGVNDVDEEFNDLVAASEAS 265 (336)
Q Consensus 186 ~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (336)
..+........++++||..+.+..+++++..+..+++||||+|+..+++.+++++.+++.++++..+++.++..++.++.
T Consensus 155 ~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~ 234 (451)
T PF00083_consen 155 SLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKES 234 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccceecccccccccccccccccccccccccccccccccccc
Confidence 87765553332235799999988888877777778899999999999999999988888665554444444443333333
Q ss_pred cccccchhhhccccc-hhHHHHHHHHHHHHHhhchhHHHHcHHHHHHhcCCCCc
Q 043735 266 KQVEHPWGNLLKRKY-RPHLTMAILIPFFQQLTGINVIMFYAPVLFNTIGFGND 318 (336)
Q Consensus 266 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~ 318 (336)
++.+.+++++++++. +++......+.......+.+...+|.+.++++.|.+..
T Consensus 235 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~ 288 (451)
T PF00083_consen 235 QESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS 288 (451)
T ss_pred cccceeeeeccccccccccccccccccccccccccccccccccccccccccccc
Confidence 333366778887644 45556666666666666777788888988888888777
No 16
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.93 E-value=1.9e-24 Score=193.06 Aligned_cols=223 Identities=14% Similarity=0.034 Sum_probs=162.8
Q ss_pred cccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhh
Q 043735 72 NQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFAN 151 (336)
Q Consensus 72 ~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~ 151 (336)
++++|+|.++.+++.+.+.+++.+++++.|+++||+|||+++....+....+.......++++.+++.|++.|++.+. .
T Consensus 18 ~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~~~-~ 96 (368)
T TIGR00903 18 AEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAALGQPF-L 96 (368)
T ss_pred HHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhHhHH-H
Confidence 444499999999999999999999999999999999999887655555444433233337899999999999999886 4
Q ss_pred hhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHH-hhcccCCChHHHH
Q 043735 152 QSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITI-GSLVLPDTPNSMI 230 (336)
Q Consensus 152 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~ 230 (336)
......++|++|+++|++++++.+.+..+|..++++++..+.+ .+|||+.|++.++++++..+ ..+++||+|++.
T Consensus 97 ~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~---~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~~- 172 (368)
T TIGR00903 97 LNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYT---AGGLQLLIIPIAAVAAAGIILVLAALPALPFQA- 172 (368)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---ccchHHHHHHHHHHHHHHHHHHHHHcCCCCCCC-
Confidence 5556667999999999999999999999999999999999887 46899999987777655444 445789887431
Q ss_pred hcCChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHcHHHHH
Q 043735 231 ERGQRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPVLF 310 (336)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (336)
++. .+. ++ . ..+++++++++ ..+...+..++....++.+..|+|.++
T Consensus 173 --~~~---------------~~~--~~----~------~~~~~~ll~~~----~~~~~~~~~~~~~~~~~~~~~wlp~~L 219 (368)
T TIGR00903 173 --AEG---------------FGF--KD----A------VKEFGALAGRK----DLWIIGAILGFGVALFDNLAIWLEAAL 219 (368)
T ss_pred --CCC---------------cch--HH----H------HHHHHHHHcCh----hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 000 00 0 01244555543 344455556666667788899999999
Q ss_pred HhcCCCCcHHHHHHHHHhHhhhe
Q 043735 311 NTIGFGNDASLMSAVITGLVNAC 333 (336)
Q Consensus 311 ~~~G~s~~~~~~~~~~~~~~~~~ 333 (336)
++.|++.. .+....+..+.+.+
T Consensus 220 ~~~g~s~~-~~~~~~l~~~~g~~ 241 (368)
T TIGR00903 220 RPAGLEDI-AGDAVALAILAGLI 241 (368)
T ss_pred HHCCCChH-HHHHHHHHHHHHHH
Confidence 88888864 55555554444443
No 17
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.93 E-value=8.5e-24 Score=192.21 Aligned_cols=260 Identities=19% Similarity=0.226 Sum_probs=190.5
Q ss_pred HHHHHHHHHHHHHHHHhhhccccccccchhhHHhhhccchhhhcccCCCCcccccCCCchhHHHHHHHHHHHHHHHHHhH
Q 043735 22 FVTVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKRFFPSVYRKQQANSSTNQYCQYNSETLTLFTSSLYLAALLSSLVAS 101 (336)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g 101 (336)
+.+....++.+..+.++++....+.. .|.+.+++ |+|+++.+++.+...++..+++++.|
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~------------------~~s~~~~g~~~~~~~~~~~~~~~~~g 71 (406)
T PRK11551 12 RLALTIGLCFLVALLEGLDLQSAGVA--APRMAQEF------------------GLDVAQMGWAFSAGILGLLPGALLGG 71 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHh------------------CCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55666666666677888877665433 35454444 89999999999999999999999999
Q ss_pred HhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHH
Q 043735 102 SVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIG 181 (336)
Q Consensus 102 ~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 181 (336)
+++||+|||+++..+.++..++.+++.+.++++.+++.|++.|++.+...+....++.|++|+++|++++++.+.+..+|
T Consensus 72 ~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 151 (406)
T PRK11551 72 RLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFG 151 (406)
T ss_pred HHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHH-hhcccCCChHHHHhcCChHHHHHHHHHHcCCCcchHHHHHHHH
Q 043735 182 ILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITI-GSLVLPDTPNSMIERGQRDEAREKLRKIRGVNDVDEEFNDLVA 260 (336)
Q Consensus 182 ~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (336)
..+++.++..+.+ ..+|++.+++.++..++..+ ...++||+|++...+.+.++.
T Consensus 152 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---------------------- 206 (406)
T PRK11551 152 GALASVIGVLAAG---DAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQR---------------------- 206 (406)
T ss_pred HHHHHHHHHHHcc---ccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhh----------------------
Confidence 9999998877765 35799999877665544443 335678876532111000000
Q ss_pred HHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHcHHHHHHhcCCCCcHHHHHHHHHhHhhheec
Q 043735 261 ASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPVLFNTIGFGNDASLMSAVITGLVNACAT 335 (336)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~ 335 (336)
+...+..++....++. .......++.....+....|.|.++++.|++..+.+......++..++++
T Consensus 207 --------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~ 272 (406)
T PRK11551 207 --------APVLRALFGEGRATAT-LLLWISYFFTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGS 272 (406)
T ss_pred --------hhhHHHHhhhhhhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHH
Confidence 0000111111111111 11222223333344566778899998899999999988888877766553
No 18
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.93 E-value=5.3e-24 Score=194.74 Aligned_cols=267 Identities=18% Similarity=0.231 Sum_probs=185.7
Q ss_pred HHHHHHHHHHHHHHHhhhccccccccchhhHHhhhccchhhhcccCCCCcccccCCCchhHHHHHHHHHHHHHHHHHhHH
Q 043735 23 VTVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKRFFPSVYRKQQANSSTNQYCQYNSETLTLFTSSLYLAALLSSLVASS 102 (336)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~ 102 (336)
++.....+.++.+.++++..... ..+|.+.+ ++|+|+.+.+++.+++.++..+++++.|+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~------------------~~~~s~~~~~~~~~~~~~~~~l~~~~~g~ 75 (426)
T PRK12307 16 QKNALFSAWLGYVFDGFDFMLIF--YIMYLIKA------------------DLGLTDMEGAFLATAAFIGRPFGGALFGL 75 (426)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHH--HHHHHHHH------------------HhCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334455566677777765543 22344433 34999999999999999999999999999
Q ss_pred hhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHH
Q 043735 103 VTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGI 182 (336)
Q Consensus 103 l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 182 (336)
++||+|||+++..+.++.+++.++++++++++.+++.|++.|++.+..++....++.|++|+++|+++.++...+..+|.
T Consensus 76 l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~ 155 (426)
T PRK12307 76 LADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGN 155 (426)
T ss_pred HHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCCChHHHHhcCChHHHHHHHHHHcCCCcchHHHHHHHHHH
Q 043735 183 LIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPDTPNSMIERGQRDEAREKLRKIRGVNDVDEEFNDLVAAS 262 (336)
Q Consensus 183 ~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (336)
.+++.+.+.+.+ ..+||+.+++..+..++........||++++...+. + .+++.. .
T Consensus 156 ~~~~~l~~~l~~---~~~w~~~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~---------~---~~~~~~---------~ 211 (426)
T PRK12307 156 IIAAYFMPSFAE---AYGWRAAFFVGLLPVLLVIYIRARAPESKEWEEAKL---------S---GKGKHS---------Q 211 (426)
T ss_pred HHHHHHHHHHcc---cCCHHHHHHHHHHHHHHHHHHHHHCCCChHHHHhhh---------h---cccccc---------c
Confidence 999988887766 357999998755443333222233455543211100 0 000000 0
Q ss_pred HhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHcHHHHHHhcCCCCcHHHHHHHHHhHhhhee
Q 043735 263 EASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPVLFNTIGFGNDASLMSAVITGLVNACA 334 (336)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~ 334 (336)
...+..+.+++++++++..+........ ........+....+.|.++++.|++..+.+...++.+++.+++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g 282 (426)
T PRK12307 212 SAWSVFSLSMKGLFNRAQFPLTLCVFIV-LFSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLG 282 (426)
T ss_pred cchhhhhHHHHHHHhhchHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 0000011234455554443332222222 2222333344567888888888999888888777777666554
No 19
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.93 E-value=1.4e-23 Score=189.77 Aligned_cols=221 Identities=22% Similarity=0.298 Sum_probs=168.5
Q ss_pred cccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhh
Q 043735 72 NQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFAN 151 (336)
Q Consensus 72 ~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~ 151 (336)
.+++|+++++.++..+...++..+++++.|+++||+|||+++..+.++.+++.+++.+.++++.+++.|++.|++.+...
T Consensus 47 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~ 126 (394)
T PRK10213 47 AQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFW 126 (394)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHH
Confidence 34459999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhh-cccCCChHHHH
Q 043735 152 QSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGS-LVLPDTPNSMI 230 (336)
Q Consensus 152 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~e~~~~~~ 230 (336)
+....++.|++|+++|+++.+....+.++|..++|.+++.+.+. ++||+.|++.+++.++..+.. ...||+++.
T Consensus 127 ~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~---~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~~-- 201 (394)
T PRK10213 127 AMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGEL---IGWRNVFNAAAVMGVLCIFWIIKSLPSLPGE-- 201 (394)
T ss_pred HHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---cCHHHHHHHHHHHHHHHHHHHHHHCCCCCcc--
Confidence 99999999999999999999999999999999999999999873 579999988776655444333 345654310
Q ss_pred hcCChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHc-HHHH
Q 043735 231 ERGQRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFY-APVL 309 (336)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 309 (336)
++ +...+.++.++++ +. +...+..++.....+....+ .|.+
T Consensus 202 ---~~-------------------------------~~~~~~~~~l~~~---~~-~~~~~~~~~~~~~~~~~~~~~~p~~ 243 (394)
T PRK10213 202 ---PS-------------------------------HQKQNTFRLLQRP---GV-MAGMIAIFMSFAGQFAFFTYIRPVY 243 (394)
T ss_pred ---cc-------------------------------cchhHHHHHhcCH---HH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0000122233322 22 22222222222233334445 4777
Q ss_pred HHhcCCCCcHHHHHHHHHhHhhheec
Q 043735 310 FNTIGFGNDASLMSAVITGLVNACAT 335 (336)
Q Consensus 310 ~~~~G~s~~~~~~~~~~~~~~~~~~~ 335 (336)
.++.|++.++.+......+++++++.
T Consensus 244 ~~~~g~s~~~~g~~~~~~~~~~iig~ 269 (394)
T PRK10213 244 MNLAGFGVDGLTLVLLSFGIASFVGT 269 (394)
T ss_pred HHhcCCChhHHHHHHHHHHHHHHHHH
Confidence 77889999998888888777776653
No 20
>TIGR00895 2A0115 benzoate transport.
Probab=99.93 E-value=2.8e-24 Score=194.38 Aligned_cols=256 Identities=18% Similarity=0.304 Sum_probs=179.5
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhh
Q 043735 74 YCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQS 153 (336)
Q Consensus 74 ~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~ 153 (336)
++|++..+.+++.+...++..+++++.|+++||+|||+++..+.++..++.++..+.++++.+++.|++.|++.+...+.
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 125 (398)
T TIGR00895 46 EWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPN 125 (398)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhh
Confidence 34889999999999999999999999999999999999999999999999999998999999999999999999999999
Q ss_pred HHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHH-HHHhhcccCCChHHHHhc
Q 043735 154 VPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALI-ITIGSLVLPDTPNSMIER 232 (336)
Q Consensus 154 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~ 232 (336)
...++.|++|+++|+++.++...+..+|..+++.+.+.+.+. .+|++.+++.++..++ ..+..+++||++++...+
T Consensus 126 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (398)
T TIGR00895 126 LNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPV---FGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSK 202 (398)
T ss_pred HHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhc---ccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhc
Confidence 999999999999999999999999999999999999888763 5799888877544443 334446788887654433
Q ss_pred CChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHcHHHHHHh
Q 043735 233 GQRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPVLFNT 312 (336)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (336)
+.++..+..++.......+.+. +..++.++.+..+...+..++....++ .+...+...+.....+....+.|.+.++
T Consensus 203 -~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (398)
T TIGR00895 203 -RPETVRRIVNAIAPQMQAEAQS-ALPEQKATQGTKRSVFKALFQGKTARI-TVLLWLLYFMLLVGVYFLTNWLPKLMVE 279 (398)
T ss_pred -CHHHHHHHHHHHHHhccccccc-cccccccccchhhHHHHHHhcchhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222222211111000000 000000000011111222333322233 2233333334444566677888977888
Q ss_pred cCCCCcHHHHHHHHHhHhhheec
Q 043735 313 IGFGNDASLMSAVITGLVNACAT 335 (336)
Q Consensus 313 ~G~s~~~~~~~~~~~~~~~~~~~ 335 (336)
.|++..+++....+..++.+++.
T Consensus 280 ~g~~~~~~~~~~~~~~~~~~~~~ 302 (398)
T TIGR00895 280 LGFSLSLAATGGALFNFGGVIGS 302 (398)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999988888888777766543
No 21
>PRK03545 putative arabinose transporter; Provisional
Probab=99.93 E-value=9.8e-24 Score=190.78 Aligned_cols=221 Identities=16% Similarity=0.164 Sum_probs=167.1
Q ss_pred cccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhh
Q 043735 72 NQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFAN 151 (336)
Q Consensus 72 ~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~ 151 (336)
.+++|+|.++.+++.+.+.+++.+++++.|++.||+|||+++..+.++.+++++.+.++++++.+++.|++.|++.+...
T Consensus 36 ~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~ 115 (390)
T PRK03545 36 AQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFAHAIFW 115 (390)
T ss_pred HhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 34459999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred hhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhh-cccCCChHHHH
Q 043735 152 QSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGS-LVLPDTPNSMI 230 (336)
Q Consensus 152 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~e~~~~~~ 230 (336)
+....++.|++|+++|+++++++..+.++|..++|++++.+.+. .|||+.|++.+++.++..+.. .++||.++.
T Consensus 116 ~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~---~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~-- 190 (390)
T PRK03545 116 SITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQY---LGWRTTFLAIGGGALITLLLLIKLLPLLPSE-- 190 (390)
T ss_pred HHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHH---hcHHHHHHHHHHHHHHHHHHHHHhCCCCCCC--
Confidence 99999999999999999999999999999999999999988763 579999998877766554433 345654310
Q ss_pred hcCChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHcHHHHH
Q 043735 231 ERGQRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPVLF 310 (336)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (336)
++ .+ ..+.++.++++..+. ...... +.....+....+.+.++
T Consensus 191 ---~~-----------------~~--------------~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~l 232 (390)
T PRK03545 191 ---HS-----------------GS--------------LKSLPLLFRRPALVS---LYLLTV-VVVTAHFTAYSYIEPFV 232 (390)
T ss_pred ---Cc-----------------ch--------------HHHHHHHHhCcHHHH---HHHHHH-HHHHHHHHHHHHHHHHH
Confidence 00 00 001223344332222 122211 22222233344555555
Q ss_pred H-hcCCCCcHHHHHHHHHhHhhheec
Q 043735 311 N-TIGFGNDASLMSAVITGLVNACAT 335 (336)
Q Consensus 311 ~-~~G~s~~~~~~~~~~~~~~~~~~~ 335 (336)
. +.|++..+++......++.+++++
T Consensus 233 ~~~~g~s~~~~~~~~~~~~~~~~~g~ 258 (390)
T PRK03545 233 QQVAGLSENFATLLLLLFGGAGIIGS 258 (390)
T ss_pred HHhcCCCccHHHHHHHHHHHHHHHHH
Confidence 4 579999999988888877776653
No 22
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.93 E-value=6.6e-24 Score=196.25 Aligned_cols=242 Identities=14% Similarity=0.152 Sum_probs=178.6
Q ss_pred cccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHhhhhhh
Q 043735 72 NQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFA--QGVWMLIVGRLLLGFGIGF 149 (336)
Q Consensus 72 ~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~--~~~~~~~~~r~l~g~~~~~ 149 (336)
+.+++++..+.+++.+.+.+++.+++++.|+++||+|||+++..+.++++++.+++.++ .+++.+++.|+++|++.+.
T Consensus 68 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~ 147 (465)
T TIGR00894 68 NPNFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGS 147 (465)
T ss_pred CCCCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhccc
Confidence 34789999999999999999999999999999999999999999999999998877543 4578899999999999999
Q ss_pred hhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhc-ccCCChHH
Q 043735 150 ANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSL-VLPDTPNS 228 (336)
Q Consensus 150 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~-~~~e~~~~ 228 (336)
..+....++.|++|+++|+++.++...+..+|..+++++.+.+.+.. .+||+.|++.+++.++..+.++ +.+|+|+.
T Consensus 148 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~--~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~ 225 (465)
T TIGR00894 148 VSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESW--GGWPMIFYVFGIVGCAWSLLWFVFPADDPSI 225 (465)
T ss_pred chhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCCeehhhhhHHHHHHHHHHHHHhcCCccc
Confidence 99999999999999999999999999999999999999999887631 2799999988887766665554 45666632
Q ss_pred HHhcCChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHcHHH
Q 043735 229 MIERGQRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPV 308 (336)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (336)
. +...++.++..++ ..++++++.+.+.+++++++. +..+...+..++.....+.+..|+|.
T Consensus 226 ~--~~~~~~~~~~i~~-------------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~lp~ 286 (465)
T TIGR00894 226 H--PCISKFEKKYINS-------------SLQGQKGSTRQSLPIKAIPKS----LPVWAIWFAIFGHFWLYTILPTYLPT 286 (465)
T ss_pred C--CCCCHHHHHHHHh-------------hcccccCCCCCCCCHHHHhcC----HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 0011110000000 000000011112234444443 33455555556666667788889999
Q ss_pred HHH-hcCCCCcHHHHHHHHHhHhhhee
Q 043735 309 LFN-TIGFGNDASLMSAVITGLVNACA 334 (336)
Q Consensus 309 ~~~-~~G~s~~~~~~~~~~~~~~~~~~ 334 (336)
+++ .+|++..++++..++..++.+++
T Consensus 287 ~l~~~~g~s~~~~g~~~~~~~~~~~i~ 313 (465)
T TIGR00894 287 FISWVLRVSGKENGLLSSLPYLFAWLC 313 (465)
T ss_pred HHHHHhCcChHHhHHHHHHHHHHHHHH
Confidence 985 47999999988877766666544
No 23
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.92 E-value=1.9e-24 Score=199.84 Aligned_cols=248 Identities=13% Similarity=0.044 Sum_probs=171.1
Q ss_pred cccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHh-----hhhHHHHHHHHHHHhhh
Q 043735 72 NQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGF-----AQGVWMLIVGRLLLGFG 146 (336)
Q Consensus 72 ~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~-----~~~~~~~~~~r~l~g~~ 146 (336)
.+++|+|.++.+++.+++.+++.+++++.|+++||+|||+++..+.+++++..+..+. +++++.+++.|++.|++
T Consensus 56 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 135 (467)
T PRK09556 56 ISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFF 135 (467)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHH
Confidence 4445999999999999999999999999999999999999999888888877766554 57899999999999999
Q ss_pred hhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhh-cccCCC
Q 043735 147 IGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGS-LVLPDT 225 (336)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~e~ 225 (336)
.+...+....++.|++|+++||++++++..+.++|..+++++...+.+.....+|+..|.+.+++.++..+.. ++.+++
T Consensus 136 ~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~ 215 (467)
T PRK09556 136 QSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDS 215 (467)
T ss_pred HhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999999999999888766553211258888877676665544443 455666
Q ss_pred hHHHHhcCChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhc-cccchhHHHHHHHHHHHHHhhchhHHHH
Q 043735 226 PNSMIERGQRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLL-KRKYRPHLTMAILIPFFQQLTGINVIMF 304 (336)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (336)
|+..... +.+ +.. .+. .+.+ + +..++++.+..+.+ +...+++.++...+..++.....+....
T Consensus 216 p~~~~~~-~~~---~~~----~~~-~~~~--~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 279 (467)
T PRK09556 216 PEELGWG-KAE---EIF----GEP-ISEE--D-----KETESTDMTKWQIFVEYVLKNPVIWLLCFANIFLYIVRIGIDN 279 (467)
T ss_pred hhhcCCC-Chh---hcc----cCc-cchh--h-----hccccccCcHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHH
Confidence 5321000 000 000 000 0000 0 00000011111211 1112223344444445555555667788
Q ss_pred cHHHHHH-hcCCCCcHHHHHHHHHhHhhheec
Q 043735 305 YAPVLFN-TIGFGNDASLMSAVITGLVNACAT 335 (336)
Q Consensus 305 ~~~~~~~-~~G~s~~~~~~~~~~~~~~~~~~~ 335 (336)
|.|.+++ ..|++..+++.......++.+++.
T Consensus 280 ~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~ 311 (467)
T PRK09556 280 WSPVYAFQELGFSKEDAINTFTLFEIGALVGS 311 (467)
T ss_pred HHHHHHHHccCCCHHHHHHHHHHHHHHHHHHH
Confidence 9998885 589999999888877777666543
No 24
>PRK09952 shikimate transporter; Provisional
Probab=99.92 E-value=9e-23 Score=187.04 Aligned_cols=184 Identities=20% Similarity=0.323 Sum_probs=141.1
Q ss_pred HHHHHHHHHHHHhhhccccccccchhhHH-hhhccchhhhcccCCCCcccccCCCchhHHHH-----HHHHHHHHHHHHH
Q 043735 26 TCIVAAMGGLIFGYDIGISGGVTSMPSFL-KRFFPSVYRKQQANSSTNQYCQYNSETLTLFT-----SSLYLAALLSSLV 99 (336)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~-----~~~~~~~~i~~~~ 99 (336)
......++.+.++||...++.. .|.+. +++.| +.++. .+++. ++.+++..+++++
T Consensus 23 ~~~~~~~~~~~~~~d~~~~~~~--~~~~~~~~~~~----------------~~~~~-~~~~~~~~~~~~~~~~~~~g~~~ 83 (438)
T PRK09952 23 AALGSFAGAVVDWYDFLLYGIT--AALVFNREFFP----------------QVSPA-MGTLAAFATFGVGFLFRPLGGVV 83 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--HHHHHHHhcCC----------------CCCcH-HHHHHHHHHHHHHHHHHhhHHHH
Confidence 4445556778899999876543 23333 23322 23333 24332 4556778899999
Q ss_pred hHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHH--------HHHHHHHHHhhhhhhhhhhHHHHhhhcCCCccchhHH
Q 043735 100 ASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVW--------MLIVGRLLLGFGIGFANQSVPLYLSEMAPYKYRGALN 171 (336)
Q Consensus 100 ~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~--------~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~ 171 (336)
.|+++||+|||+++..+.++++++++++++++++. .++++|+++|++.|..++....++.|++|+++|++..
T Consensus 84 ~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~ 163 (438)
T PRK09952 84 FGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYS 163 (438)
T ss_pred HHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHH
Confidence 99999999999999999999999999999999876 5888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccc-----CCchhHHHHhhhHHHHHHHHHhhcccCCChHH
Q 043735 172 IGFQLSITIGILIANVLNYFFAKIK-----GGWGWRLSLGGAMVPALIITIGSLVLPDTPNS 228 (336)
Q Consensus 172 ~~~~~~~~~g~~~~~~l~~~~~~~~-----~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~ 228 (336)
+..+.+..+|..+++.+...+.... ..+|||+.|++.+++.++........||+|++
T Consensus 164 ~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~ 225 (438)
T PRK09952 164 SGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEF 225 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhH
Confidence 9999999999988877766654321 13689999998877765544444557787754
No 25
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.92 E-value=3.5e-23 Score=187.97 Aligned_cols=238 Identities=20% Similarity=0.303 Sum_probs=194.8
Q ss_pred cccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHhhhhhh
Q 043735 72 NQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQ--GVWMLIVGRLLLGFGIGF 149 (336)
Q Consensus 72 ~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~--~~~~~~~~r~l~g~~~~~ 149 (336)
+.++++|.++.+++.+.++.|+.+++++.|+++||+|-|+++..+.++.++.+++...+. +++.+++.|+++|++.|.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 567899999999999999999999999999999999999999999999999999888765 456789999999999999
Q ss_pred hhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhc-ccCCChHH
Q 043735 150 ANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSL-VLPDTPNS 228 (336)
Q Consensus 150 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~-~~~e~~~~ 228 (336)
.+|....+...|.|++||++..++...+..+|.+++-++++.+.+. ..||+..|++.+..+++..++++ +..|+|..
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s--~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~ 222 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCES--SLGWPSIFYVFGIVGLIWFILWFLFYSDSPSK 222 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc--CCCCchHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 9999999999999999999999999999999999999999999985 36899999999999888877764 56677742
Q ss_pred HHhcCChHHHHHHHHHHcCCCcchHHHHHHHHHHHhcc---ccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHc
Q 043735 229 MIERGQRDEAREKLRKIRGVNDVDEEFNDLVAASEASK---QVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFY 305 (336)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (336)
. + .-.++|.+.+++...+++ +.+.+|+++++++ .++...+..++...+++.+..|
T Consensus 223 h--~----------------~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~----~vwai~~~~f~~~~~~~~l~~y 280 (466)
T KOG2532|consen 223 H--P----------------NISEKELKYIEKGKSEAHVKKKPPVPYKAILTSP----PVWAIWISAFGGNWGFYLLLTY 280 (466)
T ss_pred C--C----------------CCCHHHHHHHHhcccccccCCCCCCCHHHHHcCH----HHHHHHHHHHHHHHHHHHHHHH
Confidence 1 0 011112222222111111 1356788887765 5677777778888888999999
Q ss_pred HHHHHHh-cCCCCcHHHHHHHHHhHhhhe
Q 043735 306 APVLFNT-IGFGNDASLMSAVITGLVNAC 333 (336)
Q Consensus 306 ~~~~~~~-~G~s~~~~~~~~~~~~~~~~~ 333 (336)
.|.|+++ +|++..+.++..++..+...+
T Consensus 281 ~PtY~~~VL~f~v~~~G~~salP~l~~~~ 309 (466)
T KOG2532|consen 281 LPTYLKEVLGFDVRETGFLSALPFLAMAI 309 (466)
T ss_pred hhHHHHHHhCCChhhhhHHHHHHHHHHHH
Confidence 9999976 799999999988877766654
No 26
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.92 E-value=3.9e-23 Score=192.27 Aligned_cols=181 Identities=14% Similarity=0.120 Sum_probs=152.3
Q ss_pred HHHHHHHHHHHHHHHhhhccccccccchhhHHhhhccchhhhcccCCCCcccccCCCchhHHHHHHHHHHHHHHHHHhHH
Q 043735 23 VTVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKRFFPSVYRKQQANSSTNQYCQYNSETLTLFTSSLYLAALLSSLVASS 102 (336)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~ 102 (336)
.+.....++++.+....|....+.. +|.+.+++ |.+.++.+|+.+.+.++..++.+++|+
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~a--~p~i~~~l------------------~~s~~~~~~~~~~~~l~~~~~~~~~G~ 63 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHVA--APTLSMTL------------------GASGNELLWIIDIYSLVMAGMVLPMGA 63 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHh------------------CCCHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445556666667777777766544 46665554 889999999999999999999999999
Q ss_pred hhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHhhhcC-CCccchhHHHHHHHHHHHH
Q 043735 103 VTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVPLYLSEMA-PYKYRGALNIGFQLSITIG 181 (336)
Q Consensus 103 l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g 181 (336)
++||+|||+++..+.++..+++++++++++++.++++|+++|++.+...+.....+.+.+ |+++|+++.+++.....+|
T Consensus 64 l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g 143 (495)
T PRK14995 64 LGDRIGFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGG 143 (495)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998888887777765 6789999999999999999
Q ss_pred HHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhh-cccCCCh
Q 043735 182 ILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGS-LVLPDTP 226 (336)
Q Consensus 182 ~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~e~~ 226 (336)
..++|.+++.+.+. .+|||.|++...+.++..+.. +++||++
T Consensus 144 ~~~gp~lgg~l~~~---~gwr~~f~i~~~~~~~~~~l~~~~l~~~~ 186 (495)
T PRK14995 144 AAFGPLVGGILLEH---FYWGSVFLINVPIVLVVMGLTARYVPRQA 186 (495)
T ss_pred HHHHHHHHHHhhcc---CChHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 99999999999884 579999998766655544433 5567765
No 27
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.91 E-value=1.5e-22 Score=183.01 Aligned_cols=221 Identities=15% Similarity=0.136 Sum_probs=167.9
Q ss_pred cccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhh
Q 043735 72 NQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFAN 151 (336)
Q Consensus 72 ~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~ 151 (336)
++++|+|.++.+++.+.+.+++.+++++.|+++||+|||+++..+.++++++.+.++++++++.+++.|++.|++.+...
T Consensus 36 ~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~ 115 (393)
T PRK09705 36 RQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGVGIGIIQ 115 (393)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHHHhHHHHHh
Confidence 34449999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhccc-CCChHHHH
Q 043735 152 QSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVL-PDTPNSMI 230 (336)
Q Consensus 152 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~e~~~~~~ 230 (336)
+....++.+++| ++|+++++.+..+..+|..+++.+.+++.+.. .+||+.+...++..++..+..+.. ++.|+
T Consensus 116 ~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~--~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 189 (393)
T PRK09705 116 AVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHS--ETWYQTLAWWALPAVVALFAWWWQSAREVA--- 189 (393)
T ss_pred hhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCHHHHHHHHHHHHHHHHHHHHHHhcCCCc---
Confidence 999999999997 77999999999999999999999988877642 269988766555544333322222 11110
Q ss_pred hcCChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHcHHHHH
Q 043735 231 ERGQRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPVLF 310 (336)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (336)
++ + ++ +.+..+.+++ ++. +...+...+....++....|.|.++
T Consensus 190 --~~----------------------------~--~~-~~~~~~~l~~---~~~-~~l~~~~~~~~~~~~~~~~~lp~~l 232 (393)
T PRK09705 190 --SS----------------------------H--KT-TTTPVRVVFT---PRA-WTLGVYFGLINGGYASLIAWLPAFY 232 (393)
T ss_pred --cc----------------------------c--CC-CcCCcccccC---HhH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0 00 0011122222 222 2233333344445667788899999
Q ss_pred HhcCCCCcHHHHHHHHHhHhhheec
Q 043735 311 NTIGFGNDASLMSAVITGLVNACAT 335 (336)
Q Consensus 311 ~~~G~s~~~~~~~~~~~~~~~~~~~ 335 (336)
.+.|++..+++...++.++..++++
T Consensus 233 ~~~g~s~~~ag~~~~~~~i~~i~g~ 257 (393)
T PRK09705 233 IEIGASAQYSGSLLALMTLGQAAGA 257 (393)
T ss_pred HHcCCChhhhhHHHHHHHHHHHHHH
Confidence 8899999999999888888877664
No 28
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.91 E-value=1.3e-22 Score=184.58 Aligned_cols=224 Identities=13% Similarity=0.137 Sum_probs=167.8
Q ss_pred cccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhh
Q 043735 72 NQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFAN 151 (336)
Q Consensus 72 ~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~ 151 (336)
.+++|.+.++.++..+++.+++.++++++|+++||+|||+++..+.++++++++++.++++++.++++|+++|++.+...
T Consensus 43 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~ 122 (413)
T PRK15403 43 VRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSICFIA 122 (413)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH
Confidence 33448899999999999999999999999999999999999999999999999999999999999999999999988767
Q ss_pred hhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHh-hcccCCChHHHH
Q 043735 152 QSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIG-SLVLPDTPNSMI 230 (336)
Q Consensus 152 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~ 230 (336)
+....++.|++|+++|+++++++..+..+|..++|.+++.+.+. .|||+.|++.++..++..+. .+++||+++.
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~---~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~-- 197 (413)
T PRK15403 123 TVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHF---VHWKVLFAIIAVMGLIAFVGLLLAMPETVKR-- 197 (413)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCCccc--
Confidence 77778899999999999999999999999999999999888763 57999999888776666554 3457876421
Q ss_pred hcCChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHcHHHHH
Q 043735 231 ERGQRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPVLF 310 (336)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (336)
+++. .+. ++ ....++++++++ .++...+...........+..+.|.++
T Consensus 198 -~~~~---------------~~~--~~----------~~~~~~~ll~~~----~~~~~~l~~~~~~~~~~~~~~~~P~~l 245 (413)
T PRK15403 198 -GAVP---------------FSA--KS----------VLRDFRNVFRNR----LFLTGAATLSLSYIPMMSWVAVSPVIL 245 (413)
T ss_pred -cCCC---------------CCh--HH----------HHHHHHHHHcCH----HHHHHHHHHHHHHHHHHHHHHhChHHH
Confidence 0000 000 00 001223344333 233333333334444456666778887
Q ss_pred Hh-cCCCCcHHHHHHHHHhHhhh
Q 043735 311 NT-IGFGNDASLMSAVITGLVNA 332 (336)
Q Consensus 311 ~~-~G~s~~~~~~~~~~~~~~~~ 332 (336)
++ .|++..+.++.......+.+
T Consensus 246 ~~~~g~s~~~~gl~~~~~~~~~~ 268 (413)
T PRK15403 246 IDAGGMTTSQFAWTQVPVFGAVI 268 (413)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHH
Confidence 65 59999988887655444443
No 29
>PRK15075 citrate-proton symporter; Provisional
Probab=99.91 E-value=3.5e-22 Score=183.09 Aligned_cols=253 Identities=19% Similarity=0.317 Sum_probs=167.6
Q ss_pred HHHHHHHHHHHhhhccccccccchhhHHhhhccchhhhcccCCCCcccccCCCchhHHH-HHHH-----HHHHHHHHHHh
Q 043735 27 CIVAAMGGLIFGYDIGISGGVTSMPSFLKRFFPSVYRKQQANSSTNQYCQYNSETLTLF-TSSL-----YLAALLSSLVA 100 (336)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~-~~~~-----~~~~~i~~~~~ 100 (336)
...+.++.+.+.+|...++.. .|.+.+++ +.++.+.+.+ .+.. +++..+++++.
T Consensus 17 ~~~~~~~~~~~~~d~~~~~~~--~~~i~~~~------------------~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~ 76 (434)
T PRK15075 17 ILRVTSGNFLEMFDFFLFGFY--ATAIAKTF------------------FPAGNEFASLMLTFAVFGAGFLMRPLGAIVL 76 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHH--HHHHHHHh------------------CCCCCchHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 445556778899998776643 35555544 6666665433 3322 23335789999
Q ss_pred HHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHH--------HHHHHHHHHhhhhhhhhhhHHHHhhhcCCCccchhHHH
Q 043735 101 SSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVW--------MLIVGRLLLGFGIGFANQSVPLYLSEMAPYKYRGALNI 172 (336)
Q Consensus 101 g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~--------~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 172 (336)
|+++||+|||++++.+.+++++++++++++++++ .++++|+++|++.+...+....++.|++|+++|++.++
T Consensus 77 G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~ 156 (434)
T PRK15075 77 GAYIDRVGRRKGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTS 156 (434)
T ss_pred HHHhhhhchHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHH
Confidence 9999999999999999999999999999998876 46889999999999999988999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccc-----CCchhHHHHhhhHHHHHHHHHhhcccCCChHHHHhcCChHHHHHHHHHHcC
Q 043735 173 GFQLSITIGILIANVLNYFFAKIK-----GGWGWRLSLGGAMVPALIITIGSLVLPDTPNSMIERGQRDEAREKLRKIRG 247 (336)
Q Consensus 173 ~~~~~~~~g~~~~~~l~~~~~~~~-----~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 247 (336)
+...+.++|..+++.++..+.... ..+|||+.|++..+............||++++...
T Consensus 157 ~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~---------------- 220 (434)
T PRK15075 157 WQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFIFLIRRSLEETEEFLAR---------------- 220 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCHHHHHh----------------
Confidence 999888888888877777654211 24689999987544322221111222332210000
Q ss_pred CCcchHHHHHHHHHHHhccccccchhhhccc-cchhHHHHHHHHHHHHHhhchhHHHHcHHHHHHh-cCCCCcHHHHHHH
Q 043735 248 VNDVDEEFNDLVAASEASKQVEHPWGNLLKR-KYRPHLTMAILIPFFQQLTGINVIMFYAPVLFNT-IGFGNDASLMSAV 325 (336)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~s~~~~~~~~~ 325 (336)
+.+ .+.++.++. ...++.+.......+.....++....|.|.++++ .|++..++++...
T Consensus 221 ---------------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~ 281 (434)
T PRK15075 221 ---------------KHR----PSMREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTL 281 (434)
T ss_pred ---------------hhc----cccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 000 001111111 1112222222333333444566788899999865 7999888887777
Q ss_pred HHhHhhhee
Q 043735 326 ITGLVNACA 334 (336)
Q Consensus 326 ~~~~~~~~~ 334 (336)
+.++.++++
T Consensus 282 ~~~~~~~~~ 290 (434)
T PRK15075 282 CVGVSNFIW 290 (434)
T ss_pred HHHHHHHHH
Confidence 666665543
No 30
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.91 E-value=2.2e-22 Score=186.22 Aligned_cols=235 Identities=15% Similarity=0.106 Sum_probs=160.7
Q ss_pred cccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhh
Q 043735 72 NQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFAN 151 (336)
Q Consensus 72 ~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~ 151 (336)
.+++|+|.++.+++.+.+.+++.+++++.|+++||+|||+++..+.++++++.++++++++++.+++.|++.|++.+...
T Consensus 63 ~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~ 142 (476)
T PLN00028 63 RDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSLATFV 142 (476)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhH
Confidence 33449999999999999999999999999999999999999999999999999999999999999999999999887643
Q ss_pred hhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhc----c--cCCchhHHHHhhhHHHHHHHHHhhcccC-C
Q 043735 152 QSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAK----I--KGGWGWRLSLGGAMVPALIITIGSLVLP-D 224 (336)
Q Consensus 152 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~----~--~~~~~w~~~~~~~~~~~~~~~~~~~~~~-e 224 (336)
....++.|++|+++|++++++.+...++|..+++.+.+.+.. . .+..|||+.|++.+++.++..+..++++ +
T Consensus 143 -~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~ 221 (476)
T PLN00028 143 -SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQD 221 (476)
T ss_pred -HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 455678999999999999999987777777777665554432 1 0124899999988887766655554444 3
Q ss_pred ChHHHHhcCChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHH
Q 043735 225 TPNSMIERGQRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMF 304 (336)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (336)
.|+ ++.++. ++ +. ..++.+....+++.++.+ +.+ ...+.++...........
T Consensus 222 ~p~-----~~~~~~----~~---~~------------~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~ 273 (476)
T PLN00028 222 LPD-----GNYREL----KK---SG------------TMPKDSFSKVLRYGVTNY---RTW-ILALTYGYSFGVELTMDN 273 (476)
T ss_pred CCC-----CchhhH----Hh---cC------------ccccccHHHHHHHHHcCc---hhH-HHHHHHHHHHHHHHHHHh
Confidence 331 000000 00 00 000000001122223322 222 222223333333345566
Q ss_pred cHHHHHH-hcCCCCcHHHHHHHHHhHhhheec
Q 043735 305 YAPVLFN-TIGFGNDASLMSAVITGLVNACAT 335 (336)
Q Consensus 305 ~~~~~~~-~~G~s~~~~~~~~~~~~~~~~~~~ 335 (336)
+.|.++. +.|++..+++...++.++.+++++
T Consensus 274 ~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~ 305 (476)
T PLN00028 274 IIAEYFYDRFGLSLETAGAIAASFGLMNLFAR 305 (476)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 7787764 579999999988888887776654
No 31
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.90 E-value=4.5e-23 Score=187.71 Aligned_cols=248 Identities=15% Similarity=0.194 Sum_probs=190.5
Q ss_pred CcccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhh
Q 043735 71 TNQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFA 150 (336)
Q Consensus 71 ~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~ 150 (336)
+.++.++...+.+.+.++++++++++.+++|.|.||++-.+.+....+++++..++....+|++.+++.|++.|+.++..
T Consensus 72 ~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~ 151 (495)
T KOG2533|consen 72 LKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGG 151 (495)
T ss_pred CccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccc
Confidence 45677889999999999999999999999999999999999999999999888888888999999999999999999999
Q ss_pred hhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhccc---CCchhHHHHhhhHHHHHHHHHh-hcccCCCh
Q 043735 151 NQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIK---GGWGWRLSLGGAMVPALIITIG-SLVLPDTP 226 (336)
Q Consensus 151 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~---~~~~w~~~~~~~~~~~~~~~~~-~~~~~e~~ 226 (336)
+|....+++.|+.+++|+..++++.....+|+++|++++..+.+.. +..||||.|++.+++.+...+. .+++|+.|
T Consensus 152 wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P 231 (495)
T KOG2533|consen 152 WPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNP 231 (495)
T ss_pred chHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCCh
Confidence 9999999999999999999999999999999999999998864422 1368999999999887766654 46789988
Q ss_pred HHH--HhcCChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHH
Q 043735 227 NSM--IERGQRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMF 304 (336)
Q Consensus 227 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (336)
... ..+++++-.. ++.++++....+++.++.+..+....++ ++.+.+..++.....+.+.+
T Consensus 232 ~~~~fl~~~ek~~~~----------------~~~~~~~~~~~~~~~~~~~~~~a~~dp~-vw~~~l~~~~~~lv~~~~~~ 294 (495)
T KOG2533|consen 232 SKAWFLTDEEKELVV----------------ERLRESPSGGIENKFKWKGFKEALKDPG-VWPFSLCYFFLKLVNYGFSY 294 (495)
T ss_pred hhccccchHHHHHHH----------------HHHHhccCCCcccccCHHHHHHHHhchh-HHHHHHHHHHHhhccccHHH
Confidence 521 1111100000 0111111111111133334433333344 55566667777777888999
Q ss_pred cHHHHHHh-cCCCCcHHHHHHHHHhHhhheec
Q 043735 305 YAPVLFNT-IGFGNDASLMSAVITGLVNACAT 335 (336)
Q Consensus 305 ~~~~~~~~-~G~s~~~~~~~~~~~~~~~~~~~ 335 (336)
|+|.++++ .|++..++..+.+...++++++.
T Consensus 295 ~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~ 326 (495)
T KOG2533|consen 295 WLPLYLKSNGGYSELQANLLSTPYDVGGIVGL 326 (495)
T ss_pred HHHHHHHcCCCcChHHhccccchHHhhhHHHH
Confidence 99999988 67999999988888888877654
No 32
>PRK03699 putative transporter; Provisional
Probab=99.90 E-value=7.4e-22 Score=178.73 Aligned_cols=249 Identities=12% Similarity=0.107 Sum_probs=179.0
Q ss_pred HHHHHHHHHHHhhhccccccccchhhHHhhhccchhhhcccCCCCcccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhh
Q 043735 27 CIVAAMGGLIFGYDIGISGGVTSMPSFLKRFFPSVYRKQQANSSTNQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRK 106 (336)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr 106 (336)
...+.++.+..+++....+.. +|.+.++ +|+|.++.+++.+...+++.+++++.|++.||
T Consensus 9 ~~~~~~~~~~~~~~~~~~g~~--~~~i~~~------------------~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr 68 (394)
T PRK03699 9 TWISFLSYALTGALVIVTGMV--MGPIAEY------------------FNLPVSSMSNTFTFLNAGILISIFLNAWLMEI 68 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhhh--hHHHHHH------------------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445556676665444332 3444444 48999999999999999999999999999999
Q ss_pred hchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHH
Q 043735 107 FGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIAN 186 (336)
Q Consensus 107 ~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 186 (336)
+|||+++..+.++.+++.+++.++++++.+++.|++.|++.+...+....++.|++|+++|+.+.+..+....+|+.++|
T Consensus 69 ~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 148 (394)
T PRK03699 69 IPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFP 148 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999988888899999999999999999998888899999999
Q ss_pred HHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCCChHHHHhcCChHHHHHHHHHHcCCCcchHHHHHHHHHHHhcc
Q 043735 187 VLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPDTPNSMIERGQRDEAREKLRKIRGVNDVDEEFNDLVAASEASK 266 (336)
Q Consensus 187 ~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (336)
.+.+.+... ..+||+.|.+.+++.++..+..++ .+.|+. ++++. + ++++
T Consensus 149 ~~~~~l~~~--~~gw~~~f~~~~~~~~~~~~~~~~-~~~p~~--~~~~~------------~--------------~~~~ 197 (394)
T PRK03699 149 IIAAYLLAR--SIEWYWVYACIGLVYVAIFILTLF-SEFPAL--GKHAP------------K--------------ADKP 197 (394)
T ss_pred HHHHHHHhc--cccHHHHHHHHHHHHHHHHHHHHh-cCCccc--cccCc------------c--------------ccCc
Confidence 888776542 257999998777765554443332 222210 00000 0 0000
Q ss_pred ccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHcHHHHHH-hcCCCCcHHHHHHHHHhHhhheec
Q 043735 267 QVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPVLFN-TIGFGNDASLMSAVITGLVNACAT 335 (336)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~s~~~~~~~~~~~~~~~~~~~ 335 (336)
. .+....++ .+...+..++.....+.+..|.|.+++ +.|++..+++...+...+...+++
T Consensus 198 ~--------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~ 258 (394)
T PRK03699 198 V--------AKEKWGIG-VLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGM 258 (394)
T ss_pred c--------ccccCChH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHH
Confidence 0 01111122 333333344444455677889999985 579999999888877766665543
No 33
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.90 E-value=7.1e-23 Score=184.74 Aligned_cols=245 Identities=15% Similarity=0.136 Sum_probs=176.3
Q ss_pred cccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhh
Q 043735 72 NQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFAN 151 (336)
Q Consensus 72 ~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~ 151 (336)
.+++|+|..+.+++.++..++..+++++.|+++||+|||+++..+.++.+++.++++++++++.+++.|++.|++.+...
T Consensus 21 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~ 100 (399)
T TIGR00893 21 QEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAAEAPFF 100 (399)
T ss_pred HHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhhh
Confidence 34448999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhh-cccCCChHHHH
Q 043735 152 QSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGS-LVLPDTPNSMI 230 (336)
Q Consensus 152 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~e~~~~~~ 230 (336)
+....++.|++|+++|++..++.+....+|..+++.+.+.+.+. .+||+.+++.+++.++..+.. ++.||+|+...
T Consensus 101 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (399)
T TIGR00893 101 PGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIH---FSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKAK 177 (399)
T ss_pred hHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHh---CCchHHHHHHHHHHHHHHHHhhheecCCCCccc
Confidence 99999999999999999999999999999999999999987763 579999988777766555444 45566543110
Q ss_pred hcCChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHcHHHHH
Q 043735 231 ERGQRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPVLF 310 (336)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (336)
...++.++...+ ....+ .++.++++.++.+.++.+++ ++ .+...+..+...........+.|.++
T Consensus 178 --~~~~~~~~~~~~---~~~~~------~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (399)
T TIGR00893 178 --WLTEEEKYIVVG---GLLAE------QQGKGPSTPKKYQIKELLKD---RR-VWGLALGQFLVNIGLGFFLTWFPTYL 242 (399)
T ss_pred --cCCHHHHhhcch---hhccc------cccccccCCCccchHHHhcC---HH-HHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 001111000000 00000 00001111112223333332 23 33344444555555667778888887
Q ss_pred H-hcCCCCcHHHHHHHHHhHhhhee
Q 043735 311 N-TIGFGNDASLMSAVITGLVNACA 334 (336)
Q Consensus 311 ~-~~G~s~~~~~~~~~~~~~~~~~~ 334 (336)
. ..|++..+++....+..+.++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (399)
T TIGR00893 243 VQERGLSILEAGFMASLPGIVGFIG 267 (399)
T ss_pred HHHhcccHHHhhHHHHHHHHHHHHH
Confidence 5 57999888888877777766554
No 34
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.90 E-value=2.1e-21 Score=181.07 Aligned_cols=183 Identities=22% Similarity=0.364 Sum_probs=148.8
Q ss_pred HHHHHHHHHHHHHHHhhhccccccccchhhHHhhhccchhhhcccCCCCcccccCCCchhHHHHHHHHHHHHHHHHHhHH
Q 043735 23 VTVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKRFFPSVYRKQQANSSTNQYCQYNSETLTLFTSSLYLAALLSSLVASS 102 (336)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~ 102 (336)
.+.....+.++.+.++++....+. .+|.+.++ +|+|..+.+++.+...++..+++++.|+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~------------------~~~s~~~~~~~~~~~~~~~~~~~~~~g~ 77 (496)
T PRK03893 18 QWKAFSAAWLGYLLDGFDFVLITL--VLTEVQGE------------------FGLTTVQAASLISAAFISRWFGGLLLGA 77 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHH------------------hCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444555666666654432 23444333 4899999999999999999999999999
Q ss_pred hhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHH
Q 043735 103 VTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGI 182 (336)
Q Consensus 103 l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 182 (336)
++||+|||+++..+.++.+++.+++.+.++++.+++.|++.|++.+..++....++.|++|+++|+++.+....+..+|.
T Consensus 78 l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 157 (496)
T PRK03893 78 MGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGA 157 (496)
T ss_pred HHHHhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCCChHH
Q 043735 183 LIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPDTPNS 228 (336)
Q Consensus 183 ~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~ 228 (336)
.+++.+.+.+.+ .++||+.|++..+..++..+....+||++++
T Consensus 158 ~~~~~~~~~l~~---~~~w~~~f~~~~~~~~~~~~~~~~~p~~~~~ 200 (496)
T PRK03893 158 VVAAQVYSLVVP---VWGWRALFFIGILPIIFALWLRKNLPEAEDW 200 (496)
T ss_pred HHHHHHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHHhCCCchhh
Confidence 999999998877 4679999887555444443344456776543
No 35
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.90 E-value=8.2e-22 Score=177.70 Aligned_cols=150 Identities=18% Similarity=0.232 Sum_probs=133.7
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhh
Q 043735 74 YCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQS 153 (336)
Q Consensus 74 ~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~ 153 (336)
++|+|.++.+++.+...++..+++++.|+++||+|||+++..+.++.+++.++++++++++.+++.|++.|++.+...+.
T Consensus 32 ~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~ 111 (382)
T PRK10091 32 DVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGV 111 (382)
T ss_pred HcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHH
Confidence 34999999999999999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred HHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHh-hcccCCCh
Q 043735 154 VPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIG-SLVLPDTP 226 (336)
Q Consensus 154 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~e~~ 226 (336)
...++.|++|+++|+++.+.+..+..+|..+++++++.+.+ ..+||+.|++.++..++..+. .+++||.+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~---~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~ 182 (382)
T PRK10091 112 GAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQ---EFSWRYTFLLIAVFNIAVLASIYFWVPDIR 182 (382)
T ss_pred HHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhh---hccHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 88899999999999999999999999999999999988876 357999999877765554443 34567653
No 36
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.90 E-value=2.9e-22 Score=187.88 Aligned_cols=170 Identities=24% Similarity=0.330 Sum_probs=154.2
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhh
Q 043735 73 QYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQ 152 (336)
Q Consensus 73 ~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~ 152 (336)
+.++.+.....+..+++++|..+|++++|+++||+|||++++++.++..++.++.++++|++.+++.|++.|++.++...
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~ 190 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLT 190 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhH
Confidence 34466788889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCCChHHHHhc
Q 043735 153 SVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPDTPNSMIER 232 (336)
Q Consensus 153 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 232 (336)
....++.|++++++|+.+..+ ......++.+++...+++.+ +||+.+++..++..+.++..++.||+|+|+..+
T Consensus 191 ~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~-----~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~ 264 (521)
T KOG0255|consen 191 VGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR-----DWRWLFWIISIPSGLFLLLWFLPPESPRWLLSK 264 (521)
T ss_pred HhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHHccCcChHHHHHc
Confidence 999999999999999999999 77777788888888888876 699999999999887777766777999999999
Q ss_pred CChHHHHHHHHHHcCC
Q 043735 233 GQRDEAREKLRKIRGV 248 (336)
Q Consensus 233 ~~~~~~~~~~~~~~~~ 248 (336)
++.+++.+.+++..+.
T Consensus 265 g~~~~a~~~l~~~a~~ 280 (521)
T KOG0255|consen 265 GRIDEAIKILKKIAKL 280 (521)
T ss_pred CchHHHHHHHHHHHhh
Confidence 9999998888877543
No 37
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.90 E-value=3.4e-24 Score=186.78 Aligned_cols=155 Identities=17% Similarity=0.347 Sum_probs=142.7
Q ss_pred CCcccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhh
Q 043735 70 STNQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGF 149 (336)
Q Consensus 70 ~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~ 149 (336)
++++++|++++..|++++.+.+.+.+++++.|+++||++||+++..|..+|.++.+.++++..+|++.++|.+.|+|.+.
T Consensus 58 ~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs 137 (493)
T KOG1330|consen 58 EVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEAS 137 (493)
T ss_pred HHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhh
Confidence 34667799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhh-cccCCCh
Q 043735 150 ANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGS-LVLPDTP 226 (336)
Q Consensus 150 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~e~~ 226 (336)
+.+.++++++|.+|..+|++++++++.+..+|..+|.+++..+.+..+ .|||.|+..+++++++.++. ++.+|++
T Consensus 138 ~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~--~Wr~af~~~avl~vi~~~L~~~f~~eP~ 213 (493)
T KOG1330|consen 138 YSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTF--WWRWAFRGSAVLGVIVGLLVFLFVREPE 213 (493)
T ss_pred hcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCcc--ceEEEEEeehHHHHHHHHHHHhhccCcc
Confidence 999999999999999999999999999999999999999988887654 39999999999987776665 4666654
No 38
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.89 E-value=1.3e-21 Score=176.30 Aligned_cols=222 Identities=13% Similarity=0.152 Sum_probs=167.5
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhH
Q 043735 75 CQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSV 154 (336)
Q Consensus 75 ~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~ 154 (336)
+|.|+++.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.+.+.+.++++.+++.|++.|++.+...+..
T Consensus 35 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 114 (385)
T TIGR00710 35 LSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGASAGSVIS 114 (385)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHH
Confidence 38999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhh-cccCCChHHHHhcC
Q 043735 155 PLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGS-LVLPDTPNSMIERG 233 (336)
Q Consensus 155 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~e~~~~~~~~~ 233 (336)
..++.|++|+++|+++.+..+....+|..+++.+++.+.+. .+||+.+++.++..++..+.. ++.||+++..
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 187 (385)
T TIGR00710 115 QALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVW---LSWHAIFAFLSLAGILLSALIFFILPETLPYE---- 187 (385)
T ss_pred HHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCc----
Confidence 99999999999999999999999999999999999988763 579999987776655544443 4566654210
Q ss_pred ChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHcHHHHHH-h
Q 043735 234 QRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPVLFN-T 312 (336)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 312 (336)
++ +..++ ...+.++.++++..+. ..+.........+....+.|.+++ +
T Consensus 188 ~~--------------~~~~~-------------~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (385)
T TIGR00710 188 AR--------------IQIST-------------YFETFLLLLKSKMFWG----YALIYGASFGGFFAFFSGAPFVYIDI 236 (385)
T ss_pred cc--------------CCHHH-------------HHHHHHHHHcCchhHH----HHHHHHHHHHHHHHHHHcChHHHHHH
Confidence 00 00000 0011223333332222 222222223334455667777775 6
Q ss_pred cCCCCcHHHHHHHHHhHhhhee
Q 043735 313 IGFGNDASLMSAVITGLVNACA 334 (336)
Q Consensus 313 ~G~s~~~~~~~~~~~~~~~~~~ 334 (336)
.|+++.+.+.......+..+++
T Consensus 237 ~g~~~~~~g~~~~~~~~~~~~~ 258 (385)
T TIGR00710 237 MGVSPSVFGLLFALNIIAMIFG 258 (385)
T ss_pred cCCCHHHHHHHHHHHHHHHHHH
Confidence 8999999988887777766654
No 39
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.89 E-value=5.3e-23 Score=184.69 Aligned_cols=242 Identities=18% Similarity=0.186 Sum_probs=170.7
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhH
Q 043735 75 CQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSV 154 (336)
Q Consensus 75 ~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~ 154 (336)
+|+|..+.+++.++..++..+++++.|+++||+|||+++..+.++.+++.+++.++++++.+++.|++.|++.+...+..
T Consensus 25 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 104 (379)
T TIGR00881 25 IGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIFQGMGWPPC 104 (379)
T ss_pred hCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhccccCCch
Confidence 38999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcCCCccchhHHHHHHHHHHHHHHHHH-HHHHHhhcccCCchhHHHHhhhHHHHHHHH-HhhcccCCChHHHHhc
Q 043735 155 PLYLSEMAPYKYRGALNIGFQLSITIGILIAN-VLNYFFAKIKGGWGWRLSLGGAMVPALIIT-IGSLVLPDTPNSMIER 232 (336)
Q Consensus 155 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~-~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~ 232 (336)
..++.|++|+++|+++.++.+.+..+|..+++ .+...+.+ ..+||+.+++.+++.++.. +..++.||+|+....+
T Consensus 105 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (379)
T TIGR00881 105 GRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAE---LYSWHWVFIVPGIIAIIVSLICFLLLRDSPQSCGLP 181 (379)
T ss_pred HHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHh---cCCchhHHHHHHHHHHHHHHHHheeeCCCccccccC
Confidence 99999999999999999999999999999999 45555544 3579999887776655443 3445667765321100
Q ss_pred CChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHcHHHHHH-
Q 043735 233 GQRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPVLFN- 311 (336)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 311 (336)
+++++ .. ++.+++ + ++++++.+..+...++.++++ ..+...+..+...........+.|.++.
T Consensus 182 ~~~~~--------~~-~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (379)
T TIGR00881 182 PAEEM--------PN-EEPDGD--A-EKKEEELTKKQIFLQYVLLNK----VLWYISLGYVFVYVVRTGILDWSPLYLTQ 245 (379)
T ss_pred ccccC--------cc-cccccc--c-ccccccccchHHHHHHHHhcc----hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 00 000000 0 000000011111223333333 2333333333334344566778888875
Q ss_pred hcCCCCcHHHHHHHHHhHhhheec
Q 043735 312 TIGFGNDASLMSAVITGLVNACAT 335 (336)
Q Consensus 312 ~~G~s~~~~~~~~~~~~~~~~~~~ 335 (336)
..|++..+++...++..+..++++
T Consensus 246 ~~g~~~~~~~~~~~~~~~~~~~~~ 269 (379)
T TIGR00881 246 EKGFSKEKASWAFTLYELGGLVGT 269 (379)
T ss_pred HhCCCHHHHHHHHHHHHHHcchhH
Confidence 579999999988888887776654
No 40
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.89 E-value=5.4e-23 Score=178.76 Aligned_cols=287 Identities=22% Similarity=0.231 Sum_probs=198.3
Q ss_pred CCCchHHHHHHHHHHHHHHHHhhhccccccccchhhHHhhhccchhhhcccCCCCcccccCCCchhHHHHHHHHHHHHHH
Q 043735 17 GKLTPFVTVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKRFFPSVYRKQQANSSTNQYCQYNSETLTLFTSSLYLAALLS 96 (336)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~ 96 (336)
...+|+.....+++.++.|.|+||...++.+. |.+..-|.... +..=++++...+.+..+.++|.++|
T Consensus 33 ~g~qw~~fk~i~iAG~GfftDsYDlF~I~lVt--~il~~lY~~~~----------~~~g~~ps~i~~~Vn~~A~vGti~G 100 (538)
T KOG0252|consen 33 EGLQWKHFKAIIIAGMGFFTDSYDLFSISLVT--KILGYLYYHGD----------ESGGHYPSGVLALVNAAALVGTIFG 100 (538)
T ss_pred cchhHHHHHHHHHhhhhhcccchhhhhHHHHH--HHHHHHhcCCC----------CCCCcCCchHHHHHHHHHHHHHHHH
Confidence 34578999999999999999999999887553 55544442111 1111466777899999999999999
Q ss_pred HHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhh-------hHHHHHHHHHHHhhhhhhhhhhHHHHhhhcCCCccchh
Q 043735 97 SLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQ-------GVWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYKYRGA 169 (336)
Q Consensus 97 ~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~-------~~~~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~r~~ 169 (336)
++++|++.||+|||+++...+++..+++++++++. -.+++...|++.|+|.|+-+|...+..+|...++.||.
T Consensus 101 Ql~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa 180 (538)
T KOG0252|consen 101 QLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGA 180 (538)
T ss_pred HHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccc
Confidence 99999999999999999999999999999877643 14678899999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh----cccC--------CchhHHHHhhhHHHHHHHHHhhcccCCChHHHHhcC-ChH
Q 043735 170 LNIGFQLSITIGILIANVLNYFFA----KIKG--------GWGWRLSLGGAMVPALIITIGSLVLPDTPNSMIERG-QRD 236 (336)
Q Consensus 170 ~~~~~~~~~~~g~~~~~~l~~~~~----~~~~--------~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~-~~~ 236 (336)
..+.......+|.+.|.+++..+. +..+ +.-||..+.+.++++++.....+.+||++++..... +.+
T Consensus 181 ~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~ 260 (538)
T KOG0252|consen 181 FIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLK 260 (538)
T ss_pred eeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHh
Confidence 887666666666555555444433 2221 124999999999999888888889999998863332 222
Q ss_pred HHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchh----hhccccchhHHHHHHHHHHHHHhhchhHHHHcHHHHHHh
Q 043735 237 EAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWG----NLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPVLFNT 312 (336)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (336)
.+.+..++.... +.++.+.. +...+.+..+. ..+..+.- +..+..+..++..-..+|..+.+...+++.
T Consensus 261 ~a~~d~~k~~~~-----~~~~~~~~-~~~~~~~~~~~~~F~~~f~~~hg-~~Llgt~~~WFllDiafy~~nL~~s~I~~~ 333 (538)
T KOG0252|consen 261 QAAGDMKKVLSV-----DIEAESTA-ESDVPPPSNSFGLFSRLFLRWHG-KHLLGTAGTWFLLDIAFYGQNLFQSVIFSA 333 (538)
T ss_pred hhhhcccccccc-----ccchhhcc-ccCCCCcccccchHHHHHHHHHH-HHHHHHHHHHHhhhhhhhccccHHHHHHHh
Confidence 222222111111 01110111 11111122222 22222222 335555566666666788999999999999
Q ss_pred cCCCCcHHHH
Q 043735 313 IGFGNDASLM 322 (336)
Q Consensus 313 ~G~s~~~~~~ 322 (336)
.|+.+.+..+
T Consensus 334 ig~~~~~~~~ 343 (538)
T KOG0252|consen 334 IGVIPSANTY 343 (538)
T ss_pred hccCCCcchH
Confidence 9987665544
No 41
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.89 E-value=4e-22 Score=183.62 Aligned_cols=239 Identities=16% Similarity=0.117 Sum_probs=162.0
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhh----hHHHHHHHHHHHhhhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQ----GVWMLIVGRLLLGFGIGFAN 151 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~----~~~~~~~~r~l~g~~~~~~~ 151 (336)
|+|.++.++..+...++..+++++.|+++||+|||++++.+.++.+++.+.+++.+ +++.+++.|++.|++.+..+
T Consensus 59 g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~ 138 (452)
T PRK11273 59 GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGW 138 (452)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccc
Confidence 88999999999999999999999999999999999999999999999998887653 67788999999999999888
Q ss_pred hhHHHHhhhcCCCccchhHHHHHHHHHHHHHHH-HHHHHHHhhcccCCchhHHHHhhhHHHHHHHH-HhhcccCCChHHH
Q 043735 152 QSVPLYLSEMAPYKYRGALNIGFQLSITIGILI-ANVLNYFFAKIKGGWGWRLSLGGAMVPALIIT-IGSLVLPDTPNSM 229 (336)
Q Consensus 152 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~-~~~~~~~e~~~~~ 229 (336)
+.....+.|++|+++|++++++++.+.++|+.+ +|++...+.. ..+||+.|++.+++.++.. +..+++||+|+..
T Consensus 139 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~---~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~ 215 (452)
T PRK11273 139 PPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAW---FNDWHAALYMPAFAAILVALFAFAMMRDTPQSC 215 (452)
T ss_pred hHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH---hccHHHHHHHHHHHHHHHHHHHHHHccCCHhhc
Confidence 888888999999999999999999999998754 4443333322 1379999988777655543 4446678877431
Q ss_pred HhcCChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhcc-ccchhHHHHHHHHHHHHHhhchhHHHHcHHH
Q 043735 230 IERGQRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLK-RKYRPHLTMAILIPFFQQLTGINVIMFYAPV 308 (336)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (336)
..++ .++.++ + . ++ +.+.+++++.+.++.++ ...+++.++...+..++.....+....|.|.
T Consensus 216 ~~~~-~~~~~~---~-~--~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~ 278 (452)
T PRK11273 216 GLPP-IEEYKN---D-Y--PD----------DYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPT 278 (452)
T ss_pred CCCC-hhhhhh---c-c--cc----------ccccccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1000 000000 0 0 00 00000001111222211 1111223333434444444445667789999
Q ss_pred HHHh-cCCCCcHHHHHHHHHhHhhhee
Q 043735 309 LFNT-IGFGNDASLMSAVITGLVNACA 334 (336)
Q Consensus 309 ~~~~-~G~s~~~~~~~~~~~~~~~~~~ 334 (336)
++++ .|++..+++....+..+..+++
T Consensus 279 ~l~~~~g~s~~~~~~~~~~~~~~~~~g 305 (452)
T PRK11273 279 YLKEVKHFALDKSSWAYFLYEYAGIPG 305 (452)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 9976 6999888887776666655543
No 42
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.89 E-value=1e-22 Score=181.22 Aligned_cols=232 Identities=24% Similarity=0.430 Sum_probs=166.4
Q ss_pred cccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhh
Q 043735 72 NQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFAN 151 (336)
Q Consensus 72 ~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~ 151 (336)
.+++|.|..+.+++.++..++..+++++.|+++||+|||+++..+.++.+++.++..++++.+.+++.|++.|++.+...
T Consensus 24 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~ 103 (352)
T PF07690_consen 24 AEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGIGSGFFS 103 (352)
T ss_dssp HCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhcccccccccccc
Confidence 44558999999999999999999999999999999999999999999999997666666777799999999999999999
Q ss_pred hhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHh-hcccCCChHHHH
Q 043735 152 QSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIG-SLVLPDTPNSMI 230 (336)
Q Consensus 152 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~ 230 (336)
+....++.|++|+++|+++.+..+....+|..++|.+++.+.+ ..+||+.+++.++..++..++ .++++++++...
T Consensus 104 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~---~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~ 180 (352)
T PF07690_consen 104 PASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLIS---YFGWRWAFLISAILSLIAAILFILFLPEPPPPRE 180 (352)
T ss_dssp HHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC---HCHHCCHHHHHHHHHHHHHHHHHCCC---STTTT
T ss_pred ccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhh---ccccccccccccchhhhhhhhHhhhhhhcccccc
Confidence 9999999999999999999999999999999999999999886 357999999888887766654 244544432110
Q ss_pred hcCChHHHHHHHHHHcCCCcchHHHHHHHHHHHhcccccc-chhhhccccchhHHHHHHHHHHHHHhhchhHHHHcHHHH
Q 043735 231 ERGQRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEH-PWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPVL 309 (336)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (336)
.+++.+ ++ ++.++... .++.+.+++..+ ..................+.|.+
T Consensus 181 ~~~~~~----------------~~--------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 232 (352)
T PF07690_consen 181 RESPKE----------------SE--------SKKPKPLKPGFKSLFKNPVLW----ILLIAFFLFFFVFSGFSFFLPLY 232 (352)
T ss_dssp --SSTT----------------TT----------HHHCCCH-CTHHHHHHCCH----HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccc----------------cc--------cccccccccccccccccchhh----hhhhhhhHHHHHHHHhhcccchh
Confidence 000000 00 00000011 133333333222 22222233333445577888887
Q ss_pred -HHhcCCC-CcHHHHHHHHHhHhhhee
Q 043735 310 -FNTIGFG-NDASLMSAVITGLVNACA 334 (336)
Q Consensus 310 -~~~~G~s-~~~~~~~~~~~~~~~~~~ 334 (336)
.+..|++ ..+.+....+.++.++++
T Consensus 233 l~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (352)
T PF07690_consen 233 LQEVLGFSGPSQAGLLFSIFGIVGIIG 259 (352)
T ss_dssp CCHHHHCCTHHHHHHHHHHHHHHHHHH
T ss_pred hhhccCCCHHHHHHHHHHHHHHHHHHH
Confidence 4678998 677777777776666543
No 43
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.89 E-value=1.4e-21 Score=181.69 Aligned_cols=150 Identities=19% Similarity=0.301 Sum_probs=134.9
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhh
Q 043735 74 YCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQS 153 (336)
Q Consensus 74 ~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~ 153 (336)
++|.+..+.+++.+.+.++..++.++.|+++||+|||+++..+.++..++.++++++++++.+++.|+++|++.+...+.
T Consensus 31 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~ 110 (485)
T TIGR00711 31 DLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPL 110 (485)
T ss_pred hcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHH
Confidence 33889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhh-cccCCCh
Q 043735 154 VPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGS-LVLPDTP 226 (336)
Q Consensus 154 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~e~~ 226 (336)
...++.|++|+++|+++.+++.....+|..++|.+++.+.+ .++||+.|++.+.+.++..+.. ++.||++
T Consensus 111 ~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~---~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~ 181 (485)
T TIGR00711 111 SFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIE---NYHWRWIFLINVPIGIIVVVVAFFILPRDK 181 (485)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhcc---CcCceehhhhhhHHHHHHHHHHHHHcCCcc
Confidence 99999999999999999999999999999999999998877 4679999988777665554443 4566643
No 44
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.89 E-value=3.1e-21 Score=175.40 Aligned_cols=149 Identities=15% Similarity=0.168 Sum_probs=131.2
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhH
Q 043735 75 CQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSV 154 (336)
Q Consensus 75 ~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~ 154 (336)
+|.|..+.++..+.+.+++.+++++.|+++||+|||+++..+.++..++.+.+.++++++.+++.|++.|++.+...+..
T Consensus 43 ~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~ 122 (406)
T PRK15402 43 FNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVG 122 (406)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHH
Confidence 38899999999999999999999999999999999999999999999999999999999999999999999998888888
Q ss_pred HHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhh-cccCCCh
Q 043735 155 PLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGS-LVLPDTP 226 (336)
Q Consensus 155 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~e~~ 226 (336)
..++.|++|+++|++..+.......++..++|.+++.+.+. .+||+.+++.++..++..+.. +..||++
T Consensus 123 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~---~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (406)
T PRK15402 123 YAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHV---LPWRGMFVLFAALAALSFFGLWRAMPETA 192 (406)
T ss_pred HHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---cCccHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999988888888999999999888773 479999988777766555433 4567654
No 45
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.88 E-value=7.8e-22 Score=176.28 Aligned_cols=225 Identities=14% Similarity=0.113 Sum_probs=163.6
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhh-----hHHHHHHHHHHHhhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQ-----GVWMLIVGRLLLGFGIGFA 150 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~-----~~~~~~~~r~l~g~~~~~~ 150 (336)
+.+..+.+++.++..++..+++++.|+++||+|||+++..+.++..++.++..+.+ +++.+++.|++.|++.+..
T Consensus 30 ~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 109 (365)
T TIGR00900 30 TGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFF 109 (365)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHH
Confidence 77889999999999999999999999999999999999999999988888887777 8999999999999999999
Q ss_pred hhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhccc--CCChHH
Q 043735 151 NQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVL--PDTPNS 228 (336)
Q Consensus 151 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~--~e~~~~ 228 (336)
.+...+++.|++|+++|++..+..+.+..+|..++|.+++.+.+. .+||+.+++.++..++..+..+.+ ||.++.
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (365)
T TIGR00900 110 TPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYAT---LGIKWAIWVDAVGFAISALLIVSVRIPELAAS 186 (365)
T ss_pred HHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH---hhHHHHHHHHHHHHHHHHHHHHhcccccCCCc
Confidence 999999999999999999999999999999999999999998773 579999987776655554444333 222110
Q ss_pred HHhcCChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHH-HcHH
Q 043735 229 MIERGQRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIM-FYAP 307 (336)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 307 (336)
+++ + ..++..++ ..+.+++.++++..+. .... .+.......... .+.|
T Consensus 187 ----~~~-~------------~~~~~~~~----------~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~ 235 (365)
T TIGR00900 187 ----EIQ-A------------LSNAVLRD----------TREGIKFVLKNPLLRT---LLLL-ALLFNLVFAPAIVALFP 235 (365)
T ss_pred ----ccc-c------------cchhHHHH----------HHhHHHHHHcCcHHHH---HHHH-HHHHHHHHHHHHHHHhH
Confidence 000 0 00000000 0112333444332222 2222 222222222333 6778
Q ss_pred HHHHh-cCCCCcHHHHHHHHHhHhhhee
Q 043735 308 VLFNT-IGFGNDASLMSAVITGLVNACA 334 (336)
Q Consensus 308 ~~~~~-~G~s~~~~~~~~~~~~~~~~~~ 334 (336)
.+.++ .|++..+.+......+++.+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (365)
T TIGR00900 236 YVQSKYLGRGSTHYGWVLAAFGLGALLG 263 (365)
T ss_pred HHHHHHhCCchHHHHHHHHHHHHHHHHH
Confidence 88765 7999999998888877776654
No 46
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.88 E-value=2.7e-21 Score=173.50 Aligned_cols=151 Identities=17% Similarity=0.178 Sum_probs=129.4
Q ss_pred cccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhh
Q 043735 72 NQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFAN 151 (336)
Q Consensus 72 ~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~ 151 (336)
.+++|+|.++.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++++++++++.+++.|++.|++.+..+
T Consensus 30 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 109 (377)
T TIGR00890 30 GRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLASAGVGIAY 109 (377)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 33449999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred hhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhh-cccCCCh
Q 043735 152 QSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGS-LVLPDTP 226 (336)
Q Consensus 152 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~e~~ 226 (336)
+.....+.|++| ++|+++.+....+..+|..+++++...+.+ ..+||+.+++.+++.++..+.. +++++++
T Consensus 110 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 181 (377)
T TIGR00890 110 GIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVIN---LEGVPAAFIYMGIIFLLVIVLGAFLIGYPP 181 (377)
T ss_pred HhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHh---cccHHHHHHHHHHHHHHHHHHHHHheecCc
Confidence 888888899987 579999999999999998877666666554 3579999998887766655444 4455443
No 47
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.88 E-value=4e-22 Score=189.16 Aligned_cols=250 Identities=15% Similarity=0.161 Sum_probs=175.3
Q ss_pred CCCcccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhh-----------------
Q 043735 69 SSTNQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQ----------------- 131 (336)
Q Consensus 69 ~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~----------------- 131 (336)
++++++|+++.++.|++.+.+.++++++.++.|++.||+|||+++.++.++++++++++++.+
T Consensus 57 ~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~ 136 (633)
T TIGR00805 57 TTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGN 136 (633)
T ss_pred hhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccccccccc
Confidence 445666799999999999999999999999999999999999999999999999998887653
Q ss_pred ----------------------------------hHHHHHHHHHHHhhhhhhhhhhHHHHhhhcCCCccchhHHHHHHHH
Q 043735 132 ----------------------------------GVWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYKYRGALNIGFQLS 177 (336)
Q Consensus 132 ----------------------------------~~~~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 177 (336)
.+..++++|+++|+|.+..++...+++.|++|+++|++..++++.+
T Consensus 137 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~ 216 (633)
T TIGR00805 137 LSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESI 216 (633)
T ss_pred ccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHH
Confidence 2456789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcccCCc-------------------hhHHHHhhhHHHHHHHHHhhcccCCChHHHHhcCChHHH
Q 043735 178 ITIGILIANVLNYFFAKIKGGW-------------------GWRLSLGGAMVPALIITIGSLVLPDTPNSMIERGQRDEA 238 (336)
Q Consensus 178 ~~~g~~~~~~l~~~~~~~~~~~-------------------~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 238 (336)
..+|..+++++++++.+...++ +|+..|++.+++.++..+..+++|++.+....+.+.+..
T Consensus 217 ~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~lp~~~~~~~~~~~ 296 (633)
T TIGR00805 217 AVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPKALPKEGKRVNVDVH 296 (633)
T ss_pred HHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCcccccchhhh
Confidence 9999999999999887643111 377778877777766666556666542110000000000
Q ss_pred HHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHcHHHHHH-hcCCCC
Q 043735 239 REKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPVLFN-TIGFGN 317 (336)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~s~ 317 (336)
++ +.. .+.+.+.. .+ .....++.....++++++ +.++...+..++....++.+..|+|.+++ ++|++.
T Consensus 297 ~~--~~~-~~~~~~~~-~~---~~~~~~~~~~~~~~Ll~n----~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~ 365 (633)
T TIGR00805 297 ET--EKL-EKSEDKSR-KK---NSDITKDFPKIIKRLLCN----PIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISS 365 (633)
T ss_pred hh--hcc-cccccccc-hh---hhhhHHHHHHHHHHHHcC----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH
Confidence 00 000 00000000 00 000000011123334433 34555555666666677888899999996 589999
Q ss_pred cHHHHHHHHHhH
Q 043735 318 DASLMSAVITGL 329 (336)
Q Consensus 318 ~~~~~~~~~~~~ 329 (336)
.+++++.....+
T Consensus 366 ~~ag~l~~~~~i 377 (633)
T TIGR00805 366 AEANFLIGVVNL 377 (633)
T ss_pred HHHHHHhhhhhh
Confidence 999888766554
No 48
>PRK11043 putative transporter; Provisional
Probab=99.88 E-value=1.1e-20 Score=171.59 Aligned_cols=220 Identities=17% Similarity=0.209 Sum_probs=163.6
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhh
Q 043735 73 QYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQ 152 (336)
Q Consensus 73 ~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~ 152 (336)
+++|.++++.+++.+++.++..++++++|+++||+|||+++..+.++..++.+.+.+.++++.+++.|++.|++.+...+
T Consensus 34 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~ 113 (401)
T PRK11043 34 ADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVGVCSAAV 113 (401)
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhHHHHH
Confidence 34489999999999999999999999999999999999999999999999999999999999999999999999888888
Q ss_pred hHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCCChHHHHhc
Q 043735 153 SVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPDTPNSMIER 232 (336)
Q Consensus 153 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 232 (336)
....++.|++|+++|++..+.......++..++|.+++.+.+. .+||+.+++.++..++..+..++++|+++.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 186 (401)
T PRK11043 114 IWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNH---FGWQAIFATLFAITLLLILPTLRLKPSKKA---- 186 (401)
T ss_pred HHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHHHHHcCCCCCc----
Confidence 8888999999999999999988888899999999999988773 579999988777766665555555554310
Q ss_pred CChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHcHHHHHHh
Q 043735 233 GQRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPVLFNT 312 (336)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (336)
++++ +++.++++.++++..+.... . .......+.....+.|.++++
T Consensus 187 ~~~~------------------------------~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~p~~~~~ 232 (401)
T PRK11043 187 RKQS------------------------------QDALTFKQLLKSKTYLGNVL---I-FAACSAAFFAWLTGSPFILEQ 232 (401)
T ss_pred cccc------------------------------hHHHHHHHHHcChhHHHHHH---H-HHHHHHHHHHHHHHhHHHHHH
Confidence 0000 00012333333332221111 1 112222334556678888888
Q ss_pred cCCCCcHHHHHHHHHhHhhhe
Q 043735 313 IGFGNDASLMSAVITGLVNAC 333 (336)
Q Consensus 313 ~G~s~~~~~~~~~~~~~~~~~ 333 (336)
.|++..+.+.......+..++
T Consensus 233 ~g~s~~~~g~~~~~~~~~~~~ 253 (401)
T PRK11043 233 MGYSPADIGLSYVPQTIAFLV 253 (401)
T ss_pred cCCCHHHHHHHHHHHHHHHHH
Confidence 999988888766554444433
No 49
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.88 E-value=7.2e-21 Score=175.18 Aligned_cols=244 Identities=16% Similarity=0.162 Sum_probs=165.2
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHH-HHHHHhhhhhhhh
Q 043735 73 QYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIV-GRLLLGFGIGFAN 151 (336)
Q Consensus 73 ~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~-~r~l~g~~~~~~~ 151 (336)
+++|+|.++.+++.+.+.++..++.++.|+++||+|||++++.+.++.++++++++++++++.+++ .|++.|++.+...
T Consensus 47 ~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~ 126 (455)
T TIGR00892 47 QIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFITGLGLAFNF 126 (455)
T ss_pred HHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhh
Confidence 344999999999999999999999999999999999999999999999999999999999888765 4689999988776
Q ss_pred hhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhccc-CCChHHHH
Q 043735 152 QSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVL-PDTPNSMI 230 (336)
Q Consensus 152 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~e~~~~~~ 230 (336)
+....++.++++ ++|+++.++.+.+..+|..++|.+.+.+.+. +|||+.|++.+++.++..+..+++ ++.+...
T Consensus 127 ~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~---~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~- 201 (455)
T TIGR00892 127 QPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFES---FGWRGSFLILGGLLLHCCVCGALMRPVGPSQR- 201 (455)
T ss_pred hHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHH---hChHHHHHHHHHHHHHHHHHHHHhCCCCcccc-
Confidence 777788889996 7899999999999999999999999888773 579999998887766554444333 3222100
Q ss_pred hcCChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHcHHHHH
Q 043735 231 ERGQRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPVLF 310 (336)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (336)
+.+.++ + +....++..++. +.+ ...+ +..+....+.++++ . ++......+......+....+.|.+.
T Consensus 202 -~~~~~~-~---~~~~~~~~~~~~--~~~-~~~~-~~~~~~~~~~~~~~---~-~~~~~~~~~l~~~~~~~~~~~l~~~~ 268 (455)
T TIGR00892 202 -VSKSKS-K---EGLPPDGSTKKL--SKK-STAE-KINRFLDFSLFTHR---G-FLVYLSGNVIMFLGFFAPIIFLVPYA 268 (455)
T ss_pred -cccccc-c---ccCCCCCccccc--ccc-chhh-hhhhhcchHHhcCc---h-HHHHHHHHHHHHHHccchHHHHHHHH
Confidence 000000 0 000000000000 000 0000 00000001233332 2 33333333333334455667888888
Q ss_pred HhcCCCCcHHHHHHHHHhHhhhee
Q 043735 311 NTIGFGNDASLMSAVITGLVNACA 334 (336)
Q Consensus 311 ~~~G~s~~~~~~~~~~~~~~~~~~ 334 (336)
++.|++..+++...++.+++.+++
T Consensus 269 ~~~g~s~~~~g~~~~~~~~~~~~~ 292 (455)
T TIGR00892 269 KDKGVDEYEAAFLLSIIGFVDIFA 292 (455)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHH
Confidence 889999999999988888777654
No 50
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.88 E-value=2.9e-21 Score=177.25 Aligned_cols=240 Identities=18% Similarity=0.163 Sum_probs=166.1
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhh----hhHHHHHHHHHHHhhhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFA----QGVWMLIVGRLLLGFGIGFAN 151 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~----~~~~~~~~~r~l~g~~~~~~~ 151 (336)
|+|.++.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++.... ++++.+.+.|++.|++.+..+
T Consensus 57 g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~ 136 (438)
T TIGR00712 57 GFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGW 136 (438)
T ss_pred CCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcch
Confidence 8899999999999999999999999999999999999999999999988877654 467778889999999999888
Q ss_pred hhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHH-hhcccCCChHHHH
Q 043735 152 QSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITI-GSLVLPDTPNSMI 230 (336)
Q Consensus 152 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~ 230 (336)
+.....+.|++|+++|++++++++.+..+|+.+++.+.+..... ..+||+.|++.+++.++..+ ..+++||+|+...
T Consensus 137 ~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~--~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~ 214 (438)
T TIGR00712 137 PPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAW--FNDWHAALYFPAICAIIVALFAFAMMRDTPQSCG 214 (438)
T ss_pred HHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHH--hhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcC
Confidence 88889999999999999999999999999999998877654432 24799999987777665443 4456788764311
Q ss_pred hcCChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccch-hhhccccchhHHHHHHHHHHHHHhhchhHHHHcHHHH
Q 043735 231 ERGQRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPW-GNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPVL 309 (336)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (336)
.++ .+.. +. +.+.+..+ +.+.+.+.+... +..++++ ..+...+..++.....+.+..|.|.+
T Consensus 215 ~~~--~~~~------~~--~~~~~~~~---~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~p~~ 277 (438)
T TIGR00712 215 LPP--IEEY------RN--DYPDDYNE---KAEQELTAKEIFMQYVLPNK----LLWYIAIANVFVYLLRYGVLDWSPTY 277 (438)
T ss_pred CCC--chhc------cc--cccccccc---ccccccchHHHHHHHHccCc----hHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 000 0000 00 00000000 000000000001 1122222 23333333333334456677899999
Q ss_pred HHh-cCCCCcHHHHHHHHHhHhhhee
Q 043735 310 FNT-IGFGNDASLMSAVITGLVNACA 334 (336)
Q Consensus 310 ~~~-~G~s~~~~~~~~~~~~~~~~~~ 334 (336)
+++ .|++..++++...+.++.++++
T Consensus 278 l~~~~g~s~~~~~~~~~~~~~~~~ig 303 (438)
T TIGR00712 278 LKEVKHFALDKSSWAYFLYEYAGIPG 303 (438)
T ss_pred HHHccCCChhhHHHHHHHHHHHHHHH
Confidence 865 6999988888887777766654
No 51
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.88 E-value=8.3e-21 Score=171.52 Aligned_cols=197 Identities=16% Similarity=0.092 Sum_probs=147.1
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhh-----hhHHHHHHHHHHHhhhhh
Q 043735 74 YCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFA-----QGVWMLIVGRLLLGFGIG 148 (336)
Q Consensus 74 ~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~-----~~~~~~~~~r~l~g~~~~ 148 (336)
++|+|++|.+++.++..+++.++.++.|++.||+|.|+++.++.+++++.++..+++ ++++.+++.|++.|++ +
T Consensus 64 ~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g 142 (462)
T PRK15034 64 GFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-G 142 (462)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-H
Confidence 569999999999999999999999999999999999999999999999999998876 7999999999999997 7
Q ss_pred hhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhh-----ccc----------CCchhHHHHhhhHHHHH
Q 043735 149 FANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFA-----KIK----------GGWGWRLSLGGAMVPAL 213 (336)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~-----~~~----------~~~~w~~~~~~~~~~~~ 213 (336)
..++.....+++|+|+++||+++++.....++|..+++++...+. ... +..+||...++..++.+
T Consensus 143 ~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~i 222 (462)
T PRK15034 143 ANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLA 222 (462)
T ss_pred HhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHH
Confidence 788999999999999999999999997777777766655554432 110 12358887777666655
Q ss_pred HHHHhhc-ccCCChHHHHhcCChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHH
Q 043735 214 IITIGSL-VLPDTPNSMIERGQRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPF 292 (336)
Q Consensus 214 ~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (336)
+..+..+ ++++.++ ++.+.....+.+|++ + .|...+.+
T Consensus 223 v~~i~~~~~~~~~~~-------------------------------------~~~~~~~~~~vlk~~---~-~Wllslly 261 (462)
T PRK15034 223 IATIAAWSGMNDIAS-------------------------------------SRASIADQLPVLQRL---H-LWLLSLLY 261 (462)
T ss_pred HHHHHHHHhCCCccc-------------------------------------cccCHHHHHHHhCCC---c-hhHHHHHH
Confidence 5554444 3443321 000001122233333 3 44455556
Q ss_pred HHHhhchhHHHHcHHHHHHh
Q 043735 293 FQQLTGINVIMFYAPVLFNT 312 (336)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~ 312 (336)
++.+.++..+.+++|++.++
T Consensus 262 ~~tFG~fvg~s~~lp~~~~~ 281 (462)
T PRK15034 262 LATFGSFIGFSAGFAMLAKT 281 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 77777788888899998865
No 52
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.88 E-value=4.2e-21 Score=172.00 Aligned_cols=239 Identities=15% Similarity=0.084 Sum_probs=160.4
Q ss_pred cccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHhhhhhhh
Q 043735 72 NQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQ-GVWMLIVGRLLLGFGIGFA 150 (336)
Q Consensus 72 ~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~-~~~~~~~~r~l~g~~~~~~ 150 (336)
++++|+|..+.+++.++..++..+++++.|+++||+|||+++..+.++..++.+++.+.+ +++.+++.|++.|++.+.
T Consensus 29 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~- 107 (366)
T TIGR00886 29 KDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAGGS- 107 (366)
T ss_pred HHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhchh-
Confidence 334499999999999999999999999999999999999999999999999999999999 999999999999998554
Q ss_pred hhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhccc-------CCchhHHHHh-hhHHHHH-HHHHhhcc
Q 043735 151 NQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIK-------GGWGWRLSLG-GAMVPAL-IITIGSLV 221 (336)
Q Consensus 151 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~-------~~~~w~~~~~-~~~~~~~-~~~~~~~~ 221 (336)
.+....++.|++|+++|+++.++.....++|..+++.+++.+.... ...+||+.++ ..++... ...+...+
T Consensus 108 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 187 (366)
T TIGR00886 108 FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFV 187 (366)
T ss_pred hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHHHHHHh
Confidence 5667889999999999999999998777777777777766554311 1237998884 3343333 33333345
Q ss_pred cCCChHHHHhcCChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhH
Q 043735 222 LPDTPNSMIERGQRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINV 301 (336)
Q Consensus 222 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (336)
.+|+|+.. ++ +.+.. .+++... .+++......+.++++. .+...+...+.....+.
T Consensus 188 ~~~~~~~~----~~-~~~~~-----~~~~~~~----------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 243 (366)
T TIGR00886 188 GADTPPGK----PA-TGKLS-----FKGARWS----------VGTGALGDQLKVFRDRH----TWILALLYSVTFGSFLG 243 (366)
T ss_pred cccCCccc----cc-chhcc-----ccccccc----------ccchhHHHHHHHHhccc----hhhHHHHHHHHHHHHHH
Confidence 56655310 00 00000 0000000 00000002233333332 22222233333334456
Q ss_pred HHHcHHHHHH-hcCCCCcHHHHHHHHHhHhhheec
Q 043735 302 IMFYAPVLFN-TIGFGNDASLMSAVITGLVNACAT 335 (336)
Q Consensus 302 ~~~~~~~~~~-~~G~s~~~~~~~~~~~~~~~~~~~ 335 (336)
...+.|.+++ ..|++..+++....+..+.+++++
T Consensus 244 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 278 (366)
T TIGR00886 244 VSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLAR 278 (366)
T ss_pred HHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHh
Confidence 6778888885 579999999888877777766543
No 53
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.88 E-value=1.9e-20 Score=169.63 Aligned_cols=149 Identities=19% Similarity=0.281 Sum_probs=131.3
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhH
Q 043735 75 CQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSV 154 (336)
Q Consensus 75 ~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~ 154 (336)
+|+|..+.+++.+++.++..++++++|+++||+|||+++..+.++..++.+.+.+.++++.+++.|++.|++.+...+..
T Consensus 38 ~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~ 117 (394)
T PRK11652 38 LNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMA 117 (394)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHH
Confidence 38999999999999999999999999999999999999999999999999998889999999999999999988888888
Q ss_pred HHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHH-hhcccCCCh
Q 043735 155 PLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITI-GSLVLPDTP 226 (336)
Q Consensus 155 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~-~~~~~~e~~ 226 (336)
..+..|.+++++|+++.+..+.+..++..++|.+++.+.+ ..+||+.+++.++..++..+ ..++.||++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~---~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 187 (394)
T PRK11652 118 RTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTT---LFGWRACYLFLLLLGAGVTFSMARWMPETR 187 (394)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 8889999999999999999999999999999999998876 35799999887666554433 345667754
No 54
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.87 E-value=5.6e-21 Score=171.95 Aligned_cols=224 Identities=16% Similarity=0.221 Sum_probs=167.2
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhH
Q 043735 75 CQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSV 154 (336)
Q Consensus 75 ~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~ 154 (336)
+|+|.++.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.+.+.+.++++.+.+.|++.|++.+...+..
T Consensus 21 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 100 (377)
T PRK11102 21 FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGLAAAAASVVI 100 (377)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHh-hcccCCChHHHHhcC
Q 043735 155 PLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIG-SLVLPDTPNSMIERG 233 (336)
Q Consensus 155 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~ 233 (336)
..++.|++|+++|+++.++.+....+|..++|.+++.+.+. .+||+.+++.+++.++..+. .+++||+++..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 173 (377)
T PRK11102 101 NALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVW---FSWHAIFWVLALAAILAAALVFFFIPETLPKE---- 173 (377)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---cChHHHHHHHHHHHHHHHHHHHHhCCccCccc----
Confidence 99999999999999999999999999999999999888773 57999998777766555443 35667654210
Q ss_pred ChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHcHHHHH-Hh
Q 043735 234 QRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPVLF-NT 312 (336)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 312 (336)
+++ +.+. ++ ...+.++.++++ +. +...+.........+....+.|.++ +.
T Consensus 174 ~~~-----------~~~~----~~----------~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (377)
T PRK11102 174 RRQ-----------PFHL----RT----------TIRNFASLFRHK---RV-LGYMLASGFSFAGMFSFLTAGPFVYIEL 224 (377)
T ss_pred ccC-----------CCCh----HH----------HHHHHHHHHcCh---HH-HHHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 000 0000 00 001122333332 22 2222223333333445555666665 55
Q ss_pred cCCCCcHHHHHHHHHhHhhhee
Q 043735 313 IGFGNDASLMSAVITGLVNACA 334 (336)
Q Consensus 313 ~G~s~~~~~~~~~~~~~~~~~~ 334 (336)
.|+++.+.+.......+..+++
T Consensus 225 ~g~s~~~~g~~~~~~~~~~~~~ 246 (377)
T PRK11102 225 NGVSPQNFGYYFALNIVFLFVM 246 (377)
T ss_pred hCCCHHHHHHHHHHHHHHHHHH
Confidence 7999999988888777766554
No 55
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.87 E-value=8.9e-21 Score=168.60 Aligned_cols=154 Identities=14% Similarity=0.169 Sum_probs=134.7
Q ss_pred cccccCCCch-hHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhh
Q 043735 72 NQYCQYNSET-LTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFA 150 (336)
Q Consensus 72 ~~~~~~s~~~-~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~ 150 (336)
.+++|+|+++ .|.+.++++.++++++++.|+++||+|.|+++.++.+.+++.+++.++++++..+.+.|++.|++.|+.
T Consensus 53 ~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGvaEA~~ 132 (511)
T TIGR00806 53 LTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSVTMAAR 132 (511)
T ss_pred HHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455999999 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhh---hHHHHHHHHHhhcccCCChH
Q 043735 151 NQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGG---AMVPALIITIGSLVLPDTPN 227 (336)
Q Consensus 151 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~---~~~~~~~~~~~~~~~~e~~~ 227 (336)
. ....++..|+|+++|+++.++...+..+|.++++++++.+.. +|||+...+ ......++.+..+++|..++
T Consensus 133 ~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s----~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~ 207 (511)
T TIGR00806 133 I-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVT----LGWISYSTLNIISLVFMTFSVFLALFLKRPKR 207 (511)
T ss_pred H-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCchhHHHHHHHHHHHHHHHHHHHHhCCCCch
Confidence 9 999999999999999999999999999999999999998443 578876643 33333455556688886665
Q ss_pred HHH
Q 043735 228 SMI 230 (336)
Q Consensus 228 ~~~ 230 (336)
...
T Consensus 208 sl~ 210 (511)
T TIGR00806 208 SLF 210 (511)
T ss_pred hhh
Confidence 443
No 56
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.87 E-value=2.6e-20 Score=168.59 Aligned_cols=149 Identities=18% Similarity=0.236 Sum_probs=131.8
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhH
Q 043735 75 CQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSV 154 (336)
Q Consensus 75 ~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~ 154 (336)
+|.|..+.++..+.+.++..+++++.|+++||+|||+++..+.++..++.+.+...++++.+++.|++.|++.+...+..
T Consensus 33 ~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 112 (392)
T PRK10473 33 LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIGAGCCYVVA 112 (392)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHH
Confidence 38899999999999999999999999999999999999999999999999999989999999999999999999989999
Q ss_pred HHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHh-hcccCCCh
Q 043735 155 PLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIG-SLVLPDTP 226 (336)
Q Consensus 155 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~e~~ 226 (336)
..++.|++|+++|+++.+..+....+|..++|.+++.+.+ ..+|++.+++.++..++..+. .+++||++
T Consensus 113 ~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~---~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 182 (392)
T PRK10473 113 FAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIML---KFPWQSLFYTMAAMGILVLLLSLFILKETR 182 (392)
T ss_pred HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---CcChHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999999999999999888765 357999998877665554443 34567654
No 57
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.86 E-value=4.4e-20 Score=167.57 Aligned_cols=224 Identities=13% Similarity=0.095 Sum_probs=153.7
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHH---h-hhhHHHHHHHHHHHhhhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALING---F-AQGVWMLIVGRLLLGFGIGFAN 151 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~---~-~~~~~~~~~~r~l~g~~~~~~~ 151 (336)
|+|.++.+++.+.+.++..+++++.|+++||+|||+++..+.++.+++++.+. . .++++.+++.|++.|++.+...
T Consensus 44 g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~ 123 (402)
T TIGR00897 44 GLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFA 123 (402)
T ss_pred CCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHH
Confidence 88999999999999999999999999999999999999999999988876542 3 2578888899999999988887
Q ss_pred hhHHHHhhhcCCCccchhHHHHHHHHHHHHH-HHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHH-hhcccCCChHHH
Q 043735 152 QSVPLYLSEMAPYKYRGALNIGFQLSITIGI-LIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITI-GSLVLPDTPNSM 229 (336)
Q Consensus 152 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~-~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~-~~~~~~e~~~~~ 229 (336)
+.....+.+++|+++|++++++++.+.++|. .++|.+++.+.+. .||+..++.......+..+ ..++.++.++..
T Consensus 124 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (402)
T TIGR00897 124 YSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPA---FGEMNTLWSALAFVLTGGVIALFSNKDIFTPQ 200 (402)
T ss_pred hHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---cchHHHHHHHHHHHHHHHHHHHhccCCCCCcc
Confidence 8888889999999999999999999999996 5788888877653 4554444332222222222 223344432100
Q ss_pred HhcCChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHcHHHH
Q 043735 230 IERGQRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPVL 309 (336)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (336)
.+++ ++ +.++ .+..++++++++. ++...+..++.....+....|.|.+
T Consensus 201 -~~~~-------------~~----~~~~----------~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~p~~ 248 (402)
T TIGR00897 201 -HMQT-------------RE----KFSE----------LGKAATILFTNPN----VLLGGMVRIINTIGLFGFAVFLPMF 248 (402)
T ss_pred -cccC-------------Cc----chhh----------HHHHHHHHHcChh----HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 00 0000 0011223343332 2223233334444566778899999
Q ss_pred HHhcCCCCcHHHHHHHHHhHhhhee
Q 043735 310 FNTIGFGNDASLMSAVITGLVNACA 334 (336)
Q Consensus 310 ~~~~G~s~~~~~~~~~~~~~~~~~~ 334 (336)
.++.|++..+++.......++++++
T Consensus 249 ~~~~g~s~~~~~~~~~~~~~~~~ig 273 (402)
T TIGR00897 249 VAELGFSTSEWLQIWGTFFFTNIVF 273 (402)
T ss_pred HHHcCCChhHHHHHHHHHHHHHHHH
Confidence 9889999988887777766666554
No 58
>PRK10133 L-fucose transporter; Provisional
Probab=99.86 E-value=6.8e-20 Score=167.69 Aligned_cols=122 Identities=17% Similarity=0.222 Sum_probs=110.0
Q ss_pred cccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHH---HhhhhHHHHHHHHHHHhhhhh
Q 043735 72 NQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALIN---GFAQGVWMLIVGRLLLGFGIG 148 (336)
Q Consensus 72 ~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~---~~~~~~~~~~~~r~l~g~~~~ 148 (336)
++++|+|.++.+++.+.+.+++.+++++.|++.||+|||+++..+.++++++++++ ..+++++.++++|+++|++.+
T Consensus 53 ~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g 132 (438)
T PRK10133 53 QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLG 132 (438)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 33449999999999999999999999999999999999999999999999999775 457899999999999999999
Q ss_pred hhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 043735 149 FANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFA 193 (336)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~ 193 (336)
...+....++.|+.++++|...++..+....+|..+++.++..+.
T Consensus 133 ~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 133 CLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999877777777889999999999999998877554
No 59
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.86 E-value=2.2e-19 Score=162.31 Aligned_cols=224 Identities=15% Similarity=0.116 Sum_probs=157.9
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHH
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVP 155 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~ 155 (336)
+.+..+.+++.+.+.+++.++++++|+++||+|||++++++.++..++++.+.+..+. ++.|+++|++.+...|...
T Consensus 34 ~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~ 110 (393)
T PRK11195 34 HYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKY 110 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
Confidence 6778889999999999999999999999999999999999999999988877766654 6789999999999999999
Q ss_pred HHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCCChHHHHhcCCh
Q 043735 156 LYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPDTPNSMIERGQR 235 (336)
Q Consensus 156 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 235 (336)
+++.|++|+++|++++++.+....+|..++|.+++.+.+. .|+..+.+.+...++..+..+.+||+++....++.
T Consensus 111 a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~----~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~- 185 (393)
T PRK11195 111 GILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP----HAEAALAVCALIYLLAALFNLFIPRLGARRPGQSW- 185 (393)
T ss_pred HHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhcCCCCcccccccCC-
Confidence 9999999999999999999999999999999999999873 36666665554444444445667876521100000
Q ss_pred HHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHcHHHHHH-hcC
Q 043735 236 DEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPVLFN-TIG 314 (336)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~G 314 (336)
+. ....++.. ..++.+++++..+...+...+.+. ......+..|.+.+ .+|
T Consensus 186 -~~-------------~~~~~~~~----------~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~lg 237 (393)
T PRK11195 186 -NP-------------IALLRDFF----------HACRVLWRDKLGRFSLAGTTLFWG----AGATLRFLVLAWAPVALG 237 (393)
T ss_pred -CH-------------HHHHHHHH----------HHHHHHHhCchhHHHHHHHHHHHH----HHHHHHHHHHHHHHHHcC
Confidence 00 00000000 012234444433332222222111 12233344455553 479
Q ss_pred CCCcHHHHHHHHHhHhhheec
Q 043735 315 FGNDASLMSAVITGLVNACAT 335 (336)
Q Consensus 315 ~s~~~~~~~~~~~~~~~~~~~ 335 (336)
+++.+++......+++.++++
T Consensus 238 ~s~~~~G~~~~~~~~g~i~g~ 258 (393)
T PRK11195 238 ITLNQPAYLQAVVAIGIAVGA 258 (393)
T ss_pred CChhHHHHHHHHHHHHHHHHH
Confidence 999999999998888877654
No 60
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.86 E-value=1e-19 Score=162.44 Aligned_cols=222 Identities=19% Similarity=0.231 Sum_probs=161.7
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhh
Q 043735 73 QYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQ 152 (336)
Q Consensus 73 ~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~ 152 (336)
+++|+|.++.+++.+++.++..+++++.|+++||+|||+++..+.++..++.+.+ ..++.+.+++.|++.|++.+...+
T Consensus 28 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~g~~~~~~ 106 (355)
T TIGR00896 28 SALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALIGVGIAIINV 106 (355)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHhc
Confidence 3349999999999999999999999999999999999999999998888888777 678888999999999999998888
Q ss_pred hHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCCChHHHHhc
Q 043735 153 SVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPDTPNSMIER 232 (336)
Q Consensus 153 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 232 (336)
....++.|++| ++|+++.+.++.+.++|..+++.+.+.+.+..+ .+||+.|...++..++... .++|+.++.
T Consensus 107 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~-~~w~~~f~~~~~~~~~~~~--~~~~~~~~~---- 178 (355)
T TIGR00896 107 LLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSG-GHWQQALAWWALPALLALL--AWIPQVRRR---- 178 (355)
T ss_pred cchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHHHHH--HHhhhhccc----
Confidence 88888999886 579999999999999999999998888765422 2499888765554333222 233433210
Q ss_pred CChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHcHHHHHHh
Q 043735 233 GQRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPVLFNT 312 (336)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (336)
.+ ++++..+...++.+|++ . .+...+...+....++....|.|.++++
T Consensus 179 ~~----------------------------~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~lp~~~~~ 226 (355)
T TIGR00896 179 VA----------------------------ANQTTTRLTPVRIWRSP---L-AWQVTVFFGLQSGLYYSLIGWLPAILIS 226 (355)
T ss_pred cC----------------------------CCCCCCCCCCchhhcCH---h-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 00000011223333332 2 2222333333344455667889999988
Q ss_pred cCCCCcHHHHHHHHHhHhhheec
Q 043735 313 IGFGNDASLMSAVITGLVNACAT 335 (336)
Q Consensus 313 ~G~s~~~~~~~~~~~~~~~~~~~ 335 (336)
.|++..+.+...++..++.++++
T Consensus 227 ~g~~~~~~g~~~~~~~~~~i~~~ 249 (355)
T TIGR00896 227 HGASAATAGSLLALMQLAQAASA 249 (355)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888888777654
No 61
>PRK10504 putative transporter; Provisional
Probab=99.85 E-value=2.1e-19 Score=166.62 Aligned_cols=147 Identities=16% Similarity=0.205 Sum_probs=130.5
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHH
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVP 155 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~ 155 (336)
|.|..+.+++.+.+.++..++.+++|+++||+|||+++..+.++.+++.+++.++++++.+++.|+++|++.+...+...
T Consensus 41 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~ 120 (471)
T PRK10504 41 GESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGR 120 (471)
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999998888889999999999999999999999999
Q ss_pred HHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhh-cccCCC
Q 043735 156 LYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGS-LVLPDT 225 (336)
Q Consensus 156 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~e~ 225 (336)
.++.|++|+++|+++.+......++|..++|.+++.+.+. .+||+.|.+......+..+.. ...|+.
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~---~gw~~~f~~~~~~~~l~~~~~~~~~~~~ 188 (471)
T PRK10504 121 LTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEY---ASWHWIFLINIPVGIIGAIATLMLMPNY 188 (471)
T ss_pred HHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 9999999999999999999999999999999999998873 579999987766555444443 334443
No 62
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.85 E-value=2.7e-20 Score=157.64 Aligned_cols=234 Identities=23% Similarity=0.246 Sum_probs=182.4
Q ss_pred cccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhh
Q 043735 72 NQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFAN 151 (336)
Q Consensus 72 ~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~ 151 (336)
+..+|.+..+..+++...+.+..+++..+|.++|++|||+.+....+..++..++.+.++|+..+.+.|.+.|+|.|+ .
T Consensus 105 ~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~ 183 (528)
T KOG0253|consen 105 DEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGG-L 183 (528)
T ss_pred HhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-c
Confidence 445588889999999999999999999999999999999999999999999999999999999999999999999998 8
Q ss_pred hhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCCChHHHHh
Q 043735 152 QSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPDTPNSMIE 231 (336)
Q Consensus 152 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 231 (336)
|...++-.|..|..+|...+-.. ..+.+|.++...+.-.... +.||||.......+..+...+.+++||+||+...
T Consensus 184 pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~---~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~ 259 (528)
T KOG0253|consen 184 PVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMS---NFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLA 259 (528)
T ss_pred cHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHH---hhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhh
Confidence 88899999999999998766555 7888899988888877766 3579998888888877788888899999999999
Q ss_pred cCChHHHHHHHHHHcCCCcch-------------HHHHHHHH---HHHhccccccchhhhccccchhHHHHHHHHHHHHH
Q 043735 232 RGQRDEAREKLRKIRGVNDVD-------------EEFNDLVA---ASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQ 295 (336)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (336)
++++.++.++++++...|... +|.++... +.+..++...+..+++.+..++.++....+++...
T Consensus 260 ~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgna 339 (528)
T KOG0253|consen 260 KGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNA 339 (528)
T ss_pred cCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcChHHHHHHHHHHHHHHhhH
Confidence 999999999988887665321 11111110 11112233445566777667777666666554444
Q ss_pred hhchhHHHHcHHHHHH
Q 043735 296 LTGINVIMFYAPVLFN 311 (336)
Q Consensus 296 ~~~~~~~~~~~~~~~~ 311 (336)
+ .+|+.....+.+++
T Consensus 340 f-syyg~VLlttelfq 354 (528)
T KOG0253|consen 340 F-SYYGSVLLTTELFQ 354 (528)
T ss_pred H-HHHHHHHHHHHHHh
Confidence 4 45555555555543
No 63
>PRK12382 putative transporter; Provisional
Probab=99.85 E-value=6.8e-19 Score=159.29 Aligned_cols=136 Identities=18% Similarity=0.193 Sum_probs=117.1
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHH---h-----hhhHHHHHHHHHHHhh
Q 043735 74 YCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALING---F-----AQGVWMLIVGRLLLGF 145 (336)
Q Consensus 74 ~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~---~-----~~~~~~~~~~r~l~g~ 145 (336)
++|+|.++.+++.+++.++..++++++|+++||+|||+++..+.+...++.+... . .++++.+++.|+++|+
T Consensus 45 ~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 124 (392)
T PRK12382 45 DLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGF 124 (392)
T ss_pred hcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHH
Confidence 3499999999999999999999999999999999999999998888776654322 1 3578889999999999
Q ss_pred hhhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHH
Q 043735 146 GIGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPA 212 (336)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~ 212 (336)
+.+...+....++.|++|+++|+++++..+.+..+|..++|++++.+.+ ..||++.+++..+..
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~---~~g~~~~~~~~~~~~ 188 (392)
T PRK12382 125 GESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHS---HFGFAALALTTMVLP 188 (392)
T ss_pred HHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHh---ccChHHHHHHHHHHH
Confidence 9998888888999999999999999999999999999999999988876 357988766544443
No 64
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.85 E-value=1.9e-19 Score=163.23 Aligned_cols=138 Identities=24% Similarity=0.180 Sum_probs=120.0
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhh--------hhHHHHHHHHHHHhhh
Q 043735 75 CQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFA--------QGVWMLIVGRLLLGFG 146 (336)
Q Consensus 75 ~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~--------~~~~~~~~~r~l~g~~ 146 (336)
+|.|..+.+++.+++.++..+++++.|+++||+|||+++..+.++++++.+.+.++ .+++.+++.|++.|++
T Consensus 46 ~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 125 (399)
T PRK05122 46 LGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIG 125 (399)
T ss_pred cCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhh
Confidence 48899999999999999999999999999999999999999999888876655443 2566889999999999
Q ss_pred hhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHH
Q 043735 147 IGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALII 215 (336)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~ 215 (336)
.+...+....++.|++|+++|+++.++...+..+|..+++.+++.+.+ ..||++.+++..+..++.
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~---~~g~~~~~~~~~~~~~~~ 191 (399)
T PRK05122 126 ESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYH---WGGLAGLGLLIMLLALLG 191 (399)
T ss_pred HHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHH---cccHHHHHHHHHHHHHHH
Confidence 999999989999999999999999999999999999999999998877 357998887655554433
No 65
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.85 E-value=2.3e-19 Score=162.88 Aligned_cols=170 Identities=18% Similarity=0.184 Sum_probs=138.2
Q ss_pred HHHHHHHHhhhccccccccchhhHHhhhccchhhhcccCCCCcccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhch
Q 043735 30 AAMGGLIFGYDIGISGGVTSMPSFLKRFFPSVYRKQQANSSTNQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGR 109 (336)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Gr 109 (336)
++..++..|+.....++. +|.+.+++ |+|..+.+++.+.+.+++.+++++.|++.||+||
T Consensus 8 ~~~~f~~~G~~~~~~~~l--~~~~~~~~------------------~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~ 67 (410)
T TIGR00885 8 ITSLFALWGFANDITNPM--VPQFQQAF------------------TLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSY 67 (410)
T ss_pred HHHHHHHHHHHHHhHHHH--HHHHHHHh------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 334446666666554433 35554444 8999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHhhhhhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHH
Q 043735 110 KKSMLFGGVLFFAGALINGF---AQGVWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIAN 186 (336)
Q Consensus 110 r~~l~~~~~~~~i~~~~~~~---~~~~~~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 186 (336)
|+++..+.++++++.++... .++++.+++.|++.|++.|...+....++.+..|+++|++..++.+...++|..++|
T Consensus 68 r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~ 147 (410)
T TIGR00885 68 KAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGM 147 (410)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999877644 357999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccc-----------------------CCchhHHHHhhhHHHHHHHHHhh
Q 043735 187 VLNYFFAKIK-----------------------GGWGWRLSLGGAMVPALIITIGS 219 (336)
Q Consensus 187 ~l~~~~~~~~-----------------------~~~~w~~~~~~~~~~~~~~~~~~ 219 (336)
.+...+.... +..+||+.|++.+++.++..+..
T Consensus 148 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 148 VVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred HHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988775321 01369999987777655544433
No 66
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.85 E-value=2.2e-19 Score=161.83 Aligned_cols=119 Identities=20% Similarity=0.340 Sum_probs=112.8
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHH
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVP 155 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~ 155 (336)
|.|..+.+++.+.+.++..+++++.|+++||+|||+++..+.++.++++.+++++++++.+++.|++.|++.+...+...
T Consensus 37 ~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~ 116 (381)
T PRK03633 37 HLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVE 116 (381)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999998888888
Q ss_pred HHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 043735 156 LYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAK 194 (336)
Q Consensus 156 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~ 194 (336)
..+.+..++++|+++++.+..+.++|..++|.+.+.+.+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~ 155 (381)
T PRK03633 117 SALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVST 155 (381)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 888899999999999999999999999999999988765
No 67
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.84 E-value=9.9e-19 Score=158.98 Aligned_cols=146 Identities=16% Similarity=0.183 Sum_probs=124.3
Q ss_pred cCCCch-----hHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhh
Q 043735 76 QYNSET-----LTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFA 150 (336)
Q Consensus 76 ~~s~~~-----~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~ 150 (336)
|++..+ .+++.++..++..+++++.|+++||+|||+++..+.++.+++.+++.+.++++.+++.|++.|++.+ .
T Consensus 45 g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~ 123 (408)
T PRK09874 45 GVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLLGG-F 123 (408)
T ss_pred CCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhh-h
Confidence 666544 4888999999999999999999999999999999999999999888888999999999999999754 4
Q ss_pred hhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhh-cccCCC
Q 043735 151 NQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGS-LVLPDT 225 (336)
Q Consensus 151 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~e~ 225 (336)
.+....++.|.+|+++|+++.+....+..+|..++|.+.+.+.+. .+||+.+++.++..++..+.. +++||+
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 124 VPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADS---YGLRPVFFITASVLFLCFLVTLFCIREN 196 (408)
T ss_pred HHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 677778899999999999999999999999999999999988763 579999988777655554443 455654
No 68
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.84 E-value=9.7e-19 Score=158.54 Aligned_cols=146 Identities=15% Similarity=0.237 Sum_probs=130.3
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhH
Q 043735 75 CQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSV 154 (336)
Q Consensus 75 ~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~ 154 (336)
+|+|..+.|++.+...+...+.+++.|+++||+|||+++..+.++..++.+.+.+.++++.+++.|++.|++.+...+..
T Consensus 41 ~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~ 120 (400)
T PRK11646 41 LGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPR 120 (400)
T ss_pred hCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 38999999999999999999999999999999999999999999999999999999999999999999999988888888
Q ss_pred HHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHh-hcccCC
Q 043735 155 PLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIG-SLVLPD 224 (336)
Q Consensus 155 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~e 224 (336)
.+++.|++|+++|+++.++.+....+|..++|.+++.+.+ ++|++.|++.++..++..+. .++.||
T Consensus 121 ~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~----~g~~~~f~~~~~~~~~~~i~~~~~~~~ 187 (400)
T PRK11646 121 TALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQ----YDFRLVCATGAVLFVLAAAFNAWLLPA 187 (400)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hhHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 9999999999999999999999999999999999998874 47999998877665544433 344554
No 69
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.83 E-value=8.3e-19 Score=158.27 Aligned_cols=226 Identities=23% Similarity=0.335 Sum_probs=156.5
Q ss_pred CCCchhHHHHHH-----HHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHH--------HHHHHHHHH
Q 043735 77 YNSETLTLFTSS-----LYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVW--------MLIVGRLLL 143 (336)
Q Consensus 77 ~s~~~~~~~~~~-----~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~--------~~~~~r~l~ 143 (336)
.++++.+.+.+. .+++..+++++.|+++||+|||+++..+.++..++.+++.++++++ .+++.|+++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 106 (394)
T TIGR00883 27 SGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQ 106 (394)
T ss_pred CCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHH
Confidence 344555544433 3344457899999999999999999999999999999999888764 478899999
Q ss_pred hhhhhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhccc-----CCchhHHHHhhhHHHHHHHHHh
Q 043735 144 GFGIGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIK-----GGWGWRLSLGGAMVPALIITIG 218 (336)
Q Consensus 144 g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~-----~~~~w~~~~~~~~~~~~~~~~~ 218 (336)
|++.+...+....++.|++|+++|++..+..+.+..+|..+++.+...+.... ..++||+.+++.++..++..+.
T Consensus 107 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 186 (394)
T TIGR00883 107 GFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYL 186 (394)
T ss_pred HhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998876654311 1368999998777665555444
Q ss_pred hcccCCChHHHHhcCChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhc
Q 043735 219 SLVLPDTPNSMIERGQRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTG 298 (336)
Q Consensus 219 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (336)
....||++++..++ +++++.+.+.++.++++. ++ ++......+.....
T Consensus 187 ~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~ 234 (394)
T TIGR00883 187 RRNLEETPVFEKAQ------------------------------EKHKKKRGPIRETLTKHR-KP-FLLGLGLVIATTTT 234 (394)
T ss_pred HHhcCCChhHHHHH------------------------------hccccccCCHHHHHHhch-HH-HHHHHHHHHHHHHH
Confidence 44566655321100 000111223333443322 12 22223333333444
Q ss_pred hhHHHHcHHHHH-HhcCCCCcHHHHHHHHHhHhhhee
Q 043735 299 INVIMFYAPVLF-NTIGFGNDASLMSAVITGLVNACA 334 (336)
Q Consensus 299 ~~~~~~~~~~~~-~~~G~s~~~~~~~~~~~~~~~~~~ 334 (336)
.+....+.|.+. ++.|++..+.+.......+..+++
T Consensus 235 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 271 (394)
T TIGR00883 235 FYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFIT 271 (394)
T ss_pred HHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHH
Confidence 556677888888 568999988888777776666543
No 70
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.83 E-value=2.5e-19 Score=155.26 Aligned_cols=226 Identities=20% Similarity=0.207 Sum_probs=172.6
Q ss_pred CCcccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhH---HHHHHHHHHHhhh
Q 043735 70 STNQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGV---WMLIVGRLLLGFG 146 (336)
Q Consensus 70 ~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~---~~~~~~r~l~g~~ 146 (336)
.+++++|+|+.|.+++.++..+...+..++.|.+.||+|.|++...+.++..+.++..+++.+. +++++.+++.|++
T Consensus 39 ~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~ 118 (417)
T COG2223 39 FIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLA 118 (417)
T ss_pred hhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcc
Confidence 3467779999999999999999999999999999999999999999999999999999887644 5999999999997
Q ss_pred hhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHh-hcccCCC
Q 043735 147 IGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIG-SLVLPDT 225 (336)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~e~ 225 (336)
|..+.+...++++++|++++|.+++++. ..|+|..+..+++..+....+...|+....+.....++..+. ++.+.|.
T Consensus 119 -GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~ 196 (417)
T COG2223 119 -GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDV 196 (417)
T ss_pred -cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 5568888999999999999999999999 999999998888888876432112888887766665554444 4556666
Q ss_pred hHHHHhcCChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHc
Q 043735 226 PNSMIERGQRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFY 305 (336)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (336)
|......++ ..+...+.+.++ +..|.+.+.+...+.++..+..+
T Consensus 197 p~~r~~~~~--------------------------------~~~~~~~~v~~~----~~~W~lsllY~~tFG~Fvgfs~~ 240 (417)
T COG2223 197 PEHRASVKP--------------------------------QLPAQLKAVFSN----KDTWLLSLLYFATFGGFVGFSAY 240 (417)
T ss_pred hhhhccccc--------------------------------cchhHHHHHhcC----cchHHHHHHHHHHHHHHHHHHHH
Confidence 531000000 000112222222 23555666677888889999999
Q ss_pred HHHHH-HhcCCCCcHHHHHHHHHhHhhhe
Q 043735 306 APVLF-NTIGFGNDASLMSAVITGLVNAC 333 (336)
Q Consensus 306 ~~~~~-~~~G~s~~~~~~~~~~~~~~~~~ 333 (336)
+|.++ +++|.+..+++.......+.+.+
T Consensus 241 l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l 269 (417)
T COG2223 241 LPMYLVTQFGLSPVTAGLIAFLFPLIGAL 269 (417)
T ss_pred HHHHHHHhcCCChhhHHHHHHHHHHHHHH
Confidence 99998 46899999988777666655543
No 71
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.83 E-value=2.5e-19 Score=163.51 Aligned_cols=223 Identities=15% Similarity=0.083 Sum_probs=159.8
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHh-----hhhHHHHHHHHHHHhhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGF-----AQGVWMLIVGRLLLGFGIGFA 150 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~-----~~~~~~~~~~r~l~g~~~~~~ 150 (336)
+.+..+.+++.+...++..+++++.|+++||+|||+++..+.++.+++.+.... .++++.+.+.|++.|++.+..
T Consensus 48 ~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ 127 (417)
T PRK10489 48 TGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLG 127 (417)
T ss_pred HCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHH
Confidence 668889999999999999999999999999999999999888877776655432 457888899999999998888
Q ss_pred hhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCCChHHHH
Q 043735 151 NQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPDTPNSMI 230 (336)
Q Consensus 151 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 230 (336)
.+....++.|+.|+++|+++.++.+....+|..++|.+++.+.+. .+|++.+++.++..++..+..+.+|++++..
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~- 203 (417)
T PRK10489 128 VTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAA---GGVAWNYGLAAAGTFITLLPLLRLPALPPPP- 203 (417)
T ss_pred HHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHH---HhhHHHHHHHHHHHHHHHHHHHhCCCCCCCC-
Confidence 888889999999999999999999999999999999999988763 4688888877766666555556677654210
Q ss_pred hcCChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHcHHHHH
Q 043735 231 ERGQRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPVLF 310 (336)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (336)
++. + +..++. ...++..++++..+.. ..... +.. .......+.|.+.
T Consensus 204 --~~~-------------~---~~~~~~----------~~~~~~~~~~~~~~~~---~~~~~-~~~-~~~~~~~~~p~~~ 250 (417)
T PRK10489 204 --QPR-------------E---HPLRSL----------LAGFRFLLASPVVGGI---ALLGG-LLT-MASAVRVLYPALA 250 (417)
T ss_pred --ccc-------------c---cchHHH----------HHHHHHHHcChHHHHH---HHHHH-HHH-HHHhHHHhhHHHH
Confidence 000 0 000000 0112223333322221 11111 111 1234566778888
Q ss_pred Hh-cCCCCcHHHHHHHHHhHhhheec
Q 043735 311 NT-IGFGNDASLMSAVITGLVNACAT 335 (336)
Q Consensus 311 ~~-~G~s~~~~~~~~~~~~~~~~~~~ 335 (336)
++ .|++..+.++..+..+++.+++.
T Consensus 251 ~~~~g~~~~~~g~~~~~~~~g~~ig~ 276 (417)
T PRK10489 251 DEVWQMGAAQIGLLYAAVPLGAALGA 276 (417)
T ss_pred HhccCCChhHhHHHHHHHHHHHHHHH
Confidence 77 89999888888888777766543
No 72
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.83 E-value=1.2e-18 Score=154.70 Aligned_cols=197 Identities=27% Similarity=0.456 Sum_probs=163.4
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHH
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVP 155 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~ 155 (336)
|.+..+.+++.+...++..+++++.|+++||+|||+.+..+.++..++.+.....++++.+.+.|++.|++.+...+...
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 109 (352)
T cd06174 30 GLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAA 109 (352)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHcccccccHhHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCCChHHHHhcCCh
Q 043735 156 LYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPDTPNSMIERGQR 235 (336)
Q Consensus 156 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 235 (336)
.++.|++|+++|++..+..+....+|..++|.+++.+.+. .+|++.+++.++..++..+..++++
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~------------ 174 (352)
T cd06174 110 ALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAES---LGWRWLFLILAILGLLLALLLLFLL------------ 174 (352)
T ss_pred HHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHH---hhHHHHHHHHHHHHHHHHHHHHHHH------------
Confidence 9999999999999999999999999999999999998874 4699999887777665555443332
Q ss_pred HHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHcHHHHHHhc-C
Q 043735 236 DEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPVLFNTI-G 314 (336)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G 314 (336)
+ ..+...+..+...........+.|.+.++. |
T Consensus 175 ----------------------------------------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (352)
T cd06174 175 ----------------------------------------------R-LLLLLALAFFLLSFGYYGLLTYLPLYLQEVLG 207 (352)
T ss_pred ----------------------------------------------H-HHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 1 122333334444445566677777777664 8
Q ss_pred CCCcHHHHHHHHHhHhhhee
Q 043735 315 FGNDASLMSAVITGLVNACA 334 (336)
Q Consensus 315 ~s~~~~~~~~~~~~~~~~~~ 334 (336)
.+..+.+......++...++
T Consensus 208 ~~~~~~~~~~~~~~~~~~i~ 227 (352)
T cd06174 208 LSAAEAGLLLSLFGLGGILG 227 (352)
T ss_pred CCHHHHHHHHHHHHHHHHHH
Confidence 88888888777777766654
No 73
>PRK10054 putative transporter; Provisional
Probab=99.82 E-value=1.6e-18 Score=156.91 Aligned_cols=147 Identities=11% Similarity=0.082 Sum_probs=128.6
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhH
Q 043735 75 CQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSV 154 (336)
Q Consensus 75 ~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~ 154 (336)
+|+|..+.+++.+...++..+++++.|+++||+|||+++..+.++..++.+...+.++++.+++.|.+.|.+.+...+..
T Consensus 38 ~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 117 (395)
T PRK10054 38 YSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVL 117 (395)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 49999999999999999999999999999999999999999999999999888899999999889998888878778888
Q ss_pred HHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhh-cccCCC
Q 043735 155 PLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGS-LVLPDT 225 (336)
Q Consensus 155 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~e~ 225 (336)
..+..|..|+++|+++.++.+...++|..++|.+++.+.+ .+|+..|++.++..++..+.. +++||+
T Consensus 118 ~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~----~g~~~~f~~~~~~~~i~~i~~~~~~~~~ 185 (395)
T PRK10054 118 KAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM----QSINLPFWLAAICSAFPLVFIQIWVQRS 185 (395)
T ss_pred HHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hccCcHHHHHHHHHHHHHHHHHHHHhcc
Confidence 8999999999999999999999999999999999998874 369999987776665554433 445544
No 74
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.81 E-value=3e-18 Score=154.02 Aligned_cols=151 Identities=19% Similarity=0.260 Sum_probs=123.6
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHH-HHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhh
Q 043735 73 QYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLF-GGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFAN 151 (336)
Q Consensus 73 ~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~-~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~ 151 (336)
+++|.|.++.+++.+.+.++..+.+++.|+++||+||||.++. +.++..++.++++++++++.+++.|++.|.+.+...
T Consensus 26 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~ 105 (375)
T TIGR00899 26 EEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVLLSSFASTAN 105 (375)
T ss_pred cccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhhhhhhH
Confidence 3448999999999999999999999999999999999887654 556666677788888999999999999988877788
Q ss_pred hhHHHHhhhcCCCccchhH--HHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhh-cccCCCh
Q 043735 152 QSVPLYLSEMAPYKYRGAL--NIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGS-LVLPDTP 226 (336)
Q Consensus 152 ~~~~~~~~~~~~~~~r~~~--~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~e~~ 226 (336)
+....+..|+.|+++|++. .+....+.++|..++|.+++.+.+ ..+||+.|++.+++.++..+.. +++||.|
T Consensus 106 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~---~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 180 (375)
T TIGR00899 106 PQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLAL---GFGFTVMFLTAALAFVLCGVLVWLFLPSYP 180 (375)
T ss_pred HHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHH---hcccHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 8888888999887777654 577778888999999999998876 3579999998877765555444 4578765
No 75
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.81 E-value=6.2e-19 Score=150.24 Aligned_cols=150 Identities=18% Similarity=0.215 Sum_probs=120.8
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHH
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVP 155 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~ 155 (336)
+.+..-.|.+.+.+.+...+.++.+|.++||+|||++++.++...++...+.+.+.++..+++.|++.|+.-|- ..+..
T Consensus 64 ~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgn-l~v~r 142 (451)
T KOG2615|consen 64 GASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGN-LSVIR 142 (451)
T ss_pred cccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc-hHHHH
Confidence 34556679999999999999999999999999999999999999999999999999997777779999998664 56778
Q ss_pred HHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhc---ccCCchhHHHHhhhHHHHHH-HHHhhcccCCCh
Q 043735 156 LYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAK---IKGGWGWRLSLGGAMVPALI-ITIGSLVLPDTP 226 (336)
Q Consensus 156 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~---~~~~~~w~~~~~~~~~~~~~-~~~~~~~~~e~~ 226 (336)
++++|..++++|+.+++...+..++|.++||.+++++.. ..+.+-.-.+-++..+.+.. .....+++||+-
T Consensus 143 AiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL 217 (451)
T KOG2615|consen 143 AIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETL 217 (451)
T ss_pred HHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 999999999999999999999999999999999999987 22211111111222223332 333447889983
No 76
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.80 E-value=6.1e-18 Score=151.07 Aligned_cols=222 Identities=16% Similarity=0.176 Sum_probs=151.7
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhh-----chhHH-HHHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHhh
Q 043735 75 CQYNSETLTLFTSSLYLAALLSSLVASSVTRKF-----GRKKS-MLFGGVLFFAGALINGFA---QGVWMLIVGRLLLGF 145 (336)
Q Consensus 75 ~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-----Grr~~-l~~~~~~~~i~~~~~~~~---~~~~~~~~~r~l~g~ 145 (336)
+|+|.++.++.... .+...+ .+++|+++||+ ||||. ++.+.++.+++....++. .+.+.+....++.++
T Consensus 18 ~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~~~~~~ 95 (356)
T TIGR00901 18 KNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGLAFLIAF 95 (356)
T ss_pred cCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHH
Confidence 39999999999755 444454 99999999998 89886 566777777777666666 456667777778888
Q ss_pred hhhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccC-----CchhHHHHhhhHHHHHHHHHhhc
Q 043735 146 GIGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKG-----GWGWRLSLGGAMVPALIITIGSL 220 (336)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~-----~~~w~~~~~~~~~~~~~~~~~~~ 220 (336)
+.+...+...+++.|++|+++|+++.++...+..+|.++++.+++.+....+ .++||..|++.++..++..+..+
T Consensus 96 ~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~ 175 (356)
T TIGR00901 96 FSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTL 175 (356)
T ss_pred HHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 8888888889999999999999999999999999999999999988876432 23499999988877666555544
Q ss_pred c-cCCChHHHHhcCChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhch
Q 043735 221 V-LPDTPNSMIERGQRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGI 299 (336)
Q Consensus 221 ~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (336)
+ .||+++. ++++++ +.. +.+..++++++++..++.+..... .+......
T Consensus 176 ~~~~e~~~~---~~~~~~----------------~~~----------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 225 (356)
T TIGR00901 176 FLAKEPQED---ASVPKP----------------LTQ----------AVLKPIREFFQRKNMIQALLLLLL-IVLYKLGD 225 (356)
T ss_pred HhccCCCcc---cccchh----------------HHH----------HHHHHHHHHHHhcCchHHHHHHHH-HHHHHHHH
Confidence 3 4664310 000000 000 001123344444332333333332 23333345
Q ss_pred hHHHHcHHHHHHhcCCCCcHHHHHHHHHh
Q 043735 300 NVIMFYAPVLFNTIGFGNDASLMSAVITG 328 (336)
Q Consensus 300 ~~~~~~~~~~~~~~G~s~~~~~~~~~~~~ 328 (336)
+....+.|.++++.|++.++.+....+.+
T Consensus 226 ~~~~~~~~~~l~~~g~~~~~~g~~~~~~~ 254 (356)
T TIGR00901 226 SAATVLTTLFLLDMGFSKEEIALVAKING 254 (356)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHhHHHH
Confidence 56667888888779999999887766554
No 77
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.78 E-value=5.4e-18 Score=157.70 Aligned_cols=169 Identities=18% Similarity=0.188 Sum_probs=128.6
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHH---HHhhhhHHHHHHHHHHHhhhhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALI---NGFAQGVWMLIVGRLLLGFGIGFANQ 152 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~---~~~~~~~~~~~~~r~l~g~~~~~~~~ 152 (336)
|++..+.++..+...++..++.++.|+++||+|||+++..+.++..+.... ...+++...+++++++.|++.+....
T Consensus 282 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g 361 (490)
T PRK10642 282 HYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTG 361 (490)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 777777788888888999999999999999999999988877654443322 22234567778889999988777777
Q ss_pred hHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCCChHHHHhc
Q 043735 153 SVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPDTPNSMIER 232 (336)
Q Consensus 153 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 232 (336)
....++.|.+|++.|+++.+..+....+++.++|.+.+++.+..+ +|+..+++..+++++..+..+++||+|+++.++
T Consensus 362 ~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~--~~~~~~~~~~~~~~i~~~~~~~~pes~~~~~~~ 439 (490)
T PRK10642 362 VMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQ--NLMMPAYYLMVVAVIGLITGVTMKETANRPLKG 439 (490)
T ss_pred HHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CchHHHHHHHHHHHHHHHHHHHhccccCCCCCC
Confidence 778889999999999999997444455667788888888776322 466666655666666666667789999987654
Q ss_pred -----CChHHHHHHHHHHc
Q 043735 233 -----GQRDEAREKLRKIR 246 (336)
Q Consensus 233 -----~~~~~~~~~~~~~~ 246 (336)
++.+|+++.+++.+
T Consensus 440 ~~~~~~~~~~a~~~l~~~~ 458 (490)
T PRK10642 440 ATPAASDIQEAKEILVEHY 458 (490)
T ss_pred ccccccchhhHHHHhhccc
Confidence 77788888887776
No 78
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.78 E-value=4.8e-17 Score=138.37 Aligned_cols=224 Identities=21% Similarity=0.244 Sum_probs=181.1
Q ss_pred CCcccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhh
Q 043735 70 STNQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGF 149 (336)
Q Consensus 70 ~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~ 149 (336)
++++++|+|.+..|+++++..+...+.+++..++++|+|.++.+..++++.+++..+-... +...++.+-.+.|.+.+.
T Consensus 37 ~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~~~L~~gt~l~G~gIav 115 (395)
T COG2807 37 EIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GLPLLFLGTLLAGAGIAV 115 (395)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHhhHHH
Confidence 3467779999999999999999999999999999999999999999999999999988876 677888999999999999
Q ss_pred hhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCCChHHH
Q 043735 150 ANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPDTPNSM 229 (336)
Q Consensus 150 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 229 (336)
.+...+..+-+.||+| -+..+++|.+..++|..+++.+...+.+.. .+||....+-+.+++++.+.++ |...|..
T Consensus 116 ~nVLLPslIK~~Fpk~-~~~mtglYs~sl~~~aaLaa~lavpla~~~--~gW~~aL~~WAl~allAl~~Wl--Pq~~r~~ 190 (395)
T COG2807 116 INVLLPSLIKRDFPKR-VGLMTGLYSTSLGAGAALAAALAVPLAQHS--GGWRGALGFWALLALLALLIWL--PQALREQ 190 (395)
T ss_pred HHHhhhHHHHhhcccc-hhhHHhHHHHHHHHHHHHHhhhhhHHHHhh--ccHHHHHHHHHHHHHHHHHHHh--hhccccc
Confidence 9999999999999865 699999999999999999999998888764 3799998888888887776654 3211100
Q ss_pred HhcCChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHcHHHH
Q 043735 230 IERGQRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPVL 309 (336)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (336)
....+.+..+...++|++ ..|.+.+++..+...+|....|+|.+
T Consensus 191 --------------------------------~~~~~~~~~~~~~vw~~~----~aW~vtLfmGlqS~~~Y~~~~WLP~i 234 (395)
T COG2807 191 --------------------------------AASIATKLVSVRKVWRSP----LAWQVTLFMGLQSLLYYIVIGWLPAI 234 (395)
T ss_pred --------------------------------ccccccccccccccccCc----hhHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 000011111222344444 45566667777777889999999999
Q ss_pred HHhcCCCCcHHHHHHHHHhHhhheec
Q 043735 310 FNTIGFGNDASLMSAVITGLVNACAT 335 (336)
Q Consensus 310 ~~~~G~s~~~~~~~~~~~~~~~~~~~ 335 (336)
+.+.|+|.++++...+...+..++.+
T Consensus 235 li~~G~sa~~aG~llsl~~l~~~~~~ 260 (395)
T COG2807 235 LIDRGLSAAEAGSLLSLMQLAQLPTA 260 (395)
T ss_pred HHHcCCCHHHhhhHHHHHHHHHHHHH
Confidence 99999999999998888887776543
No 79
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.78 E-value=4.2e-18 Score=156.76 Aligned_cols=257 Identities=18% Similarity=0.252 Sum_probs=184.3
Q ss_pred cccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH-HHHhhhhhhh
Q 043735 72 NQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGR-LLLGFGIGFA 150 (336)
Q Consensus 72 ~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r-~l~g~~~~~~ 150 (336)
.++++.+.++++|+.++......+..++.+.+.||+|.|.+.+.+.++..++.++..+++++|++++.. ++.|+|.|..
T Consensus 73 ~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~ 152 (509)
T KOG2504|consen 73 MDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLI 152 (509)
T ss_pred HHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhh
Confidence 344488889999999999999999999999999999999999999999999999999999999888776 8999999999
Q ss_pred hhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCC-ChHHH
Q 043735 151 NQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPD-TPNSM 229 (336)
Q Consensus 151 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e-~~~~~ 229 (336)
+.....++..+|+ |+|+.++++...+.++|..+-|.+...+.+ ..|||+.+++.+.+.+..++....+++ .+...
T Consensus 153 ~~paiviv~~YF~-kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~---~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~ 228 (509)
T KOG2504|consen 153 YLPAVVILGTYFE-KKRALATGIAVSGTGVGTVVFPPLLKYLLS---KYGWRGALLIFGGISLNVLVAGALLRPLSPPKK 228 (509)
T ss_pred hcchhhhhhhHhH-HHHHHHHhhhhccCCcceeeHHHHHHHHHH---HhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCC
Confidence 9999999998775 669999999999999999999999988888 467999998887777665555544433 22110
Q ss_pred Hh-cCChHHHHHHH-------HHHcCC-CcchH-----HHHHHHHHHHhcc--ccccch----hhhccccchhHHHHHHH
Q 043735 230 IE-RGQRDEAREKL-------RKIRGV-NDVDE-----EFNDLVAASEASK--QVEHPW----GNLLKRKYRPHLTMAIL 289 (336)
Q Consensus 230 ~~-~~~~~~~~~~~-------~~~~~~-~~~~~-----~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~ 289 (336)
.. .++.+...+.. ++.... +.... +.++.++..++.. ..+... .+++++ +.++.+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~----~~fl~~~ 304 (509)
T KOG2504|consen 229 PNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKD----PKFLLLA 304 (509)
T ss_pred chhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcC----chHHHHH
Confidence 00 00000000000 000000 00000 0011111111111 011111 233333 5677777
Q ss_pred HHHHHHhhchhHHHHcHHHHHHhcCCCCcHHHHHHHHHhHhhheecC
Q 043735 290 IPFFQQLTGINVIMFYAPVLFNTIGFGNDASLMSAVITGLVNACATL 336 (336)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~ 336 (336)
+...+...++.....++|.+.++.|++..+++.+.++.++..+++++
T Consensus 305 ~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi 351 (509)
T KOG2504|consen 305 LSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRI 351 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhh
Confidence 77777888888999999999999999999999999999999988764
No 80
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.78 E-value=2.2e-17 Score=153.36 Aligned_cols=147 Identities=18% Similarity=0.258 Sum_probs=120.0
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhh-----chhHH-HHHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKF-----GRKKS-MLFGGVLFFAGALINGFA---QGVWMLIVGRLLLGFG 146 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-----Grr~~-l~~~~~~~~i~~~~~~~~---~~~~~~~~~r~l~g~~ 146 (336)
|.|.++++.+ +.....+ ++++++|+++||+ |||+. +..+.++.+++..++++. ++++.+.+.+++.+++
T Consensus 43 g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~ 120 (491)
T PRK11010 43 NIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFC 120 (491)
T ss_pred CCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHH
Confidence 7788888886 3333333 6899999999999 99885 667777777777777664 4678888899999999
Q ss_pred hhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCCCh
Q 043735 147 IGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPDTP 226 (336)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~ 226 (336)
.+...+...++..|++|+++|+++.++...+..+|..+++.+...+.+. .+|||..|++.++..++..+..++.||++
T Consensus 121 ~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~--~~GWr~~f~i~a~l~ll~~l~~~~~~e~~ 198 (491)
T PRK11010 121 SASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADR--YLGWQGMYWLMAALLIPCIIATLLAPEPT 198 (491)
T ss_pred HHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc--ccCHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 9999999999999999999999999999999999999999998888762 14799999988877666665555677764
No 81
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.78 E-value=1.4e-17 Score=150.09 Aligned_cols=217 Identities=15% Similarity=0.121 Sum_probs=143.6
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchh----HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRK----KSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFAN 151 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr----~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~ 151 (336)
|.|.+++|++.+++.++..++++++|++.||+||| +.+.+..++. ........++++.+++.|++.|++.+...
T Consensus 35 g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~l~g~~~~~~~ 112 (382)
T PRK11128 35 GYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFGAHSFWLLFVAIGLFNLFFSPLV 112 (382)
T ss_pred CCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHhcccHHHHHHHHHHHHHHHcccc
Confidence 89999999999999999999999999999999984 3332222221 22233445789999999999999988888
Q ss_pred hhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCCChHHHHh
Q 043735 152 QSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPDTPNSMIE 231 (336)
Q Consensus 152 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 231 (336)
+...++..++ +++|++..+......++|..++|++++++.+. +|||..|+..++..++..+..++.||.++.
T Consensus 113 ~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~---~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~--- 184 (382)
T PRK11128 113 PLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSW---FGEQAILWILTAGVASMLLGQLLRPTIMPQ--- 184 (382)
T ss_pred cHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHH---cChhHHHHHHHHHHHHHHHHHHccCCCCCc---
Confidence 8877777776 35578888888888899999999999999873 579999987665544444333444543210
Q ss_pred cCChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHcHHHHHH
Q 043735 232 RGQRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPVLFN 311 (336)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (336)
++++ +..++...++++++|++..+. ..+..+...........+.|.+.+
T Consensus 185 -~~~~--------------------------~~~~~~~~~~~~i~~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~ 233 (382)
T PRK11128 185 -GESR--------------------------QQESAGWPAWKALLKEPTVWR----FLLCVSLLQGSHAAYYGFSAIYWQ 233 (382)
T ss_pred -cccc--------------------------cccccccchHHHHHcChhHHH----HHHHHHHHHHHhHhHHHHHHHHHH
Confidence 0000 000011224555555543322 222222222223345556677778
Q ss_pred hcCCCCcHHHHHHHHHhHhhhe
Q 043735 312 TIGFGNDASLMSAVITGLVNAC 333 (336)
Q Consensus 312 ~~G~s~~~~~~~~~~~~~~~~~ 333 (336)
+.|++..+.+....+..+..++
T Consensus 234 ~~g~s~~~~g~~~~~~~~~~~~ 255 (382)
T PRK11128 234 AAGYSASTIGYLWSLGVVAEVL 255 (382)
T ss_pred HCCCCHhHHHHHHHHHHHHHHH
Confidence 8999988888877766555443
No 82
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.77 E-value=3.7e-17 Score=148.42 Aligned_cols=147 Identities=17% Similarity=0.216 Sum_probs=122.3
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhh-----chhH-HHHHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKF-----GRKK-SMLFGGVLFFAGALINGFA---QGVWMLIVGRLLLGFG 146 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-----Grr~-~l~~~~~~~~i~~~~~~~~---~~~~~~~~~r~l~g~~ 146 (336)
|+|.+++|++..+... .+.++++|+++||+ |||| ++..+.++.+++.....+. ++++.+.+..++.+++
T Consensus 30 g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~ 107 (402)
T PRK11902 30 GLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGLAVLVAFL 107 (402)
T ss_pred CCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHH
Confidence 9999999999777765 69999999999999 8875 7888888888888777776 3577778787888888
Q ss_pred hhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCCCh
Q 043735 147 IGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPDTP 226 (336)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~ 226 (336)
.+...+...+++.|+.|+++|+++.++...+..+|..+++.+...+.+.. +|||..|++.++..++..+..++.||++
T Consensus 108 ~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~--~gw~~~f~i~a~~~l~~~l~~~~~~e~~ 185 (402)
T PRK11902 108 SASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRV--LGWGNTYLLMAGLMLAGALTTLWAPEPE 185 (402)
T ss_pred HHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcc--cCHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 88888999999999999999999999999999999999999888887631 3799999987777665555555667654
No 83
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.76 E-value=4.2e-16 Score=141.09 Aligned_cols=150 Identities=17% Similarity=0.189 Sum_probs=111.3
Q ss_pred ccccCCCchhHHHHHHHHH-HHHHHHHHhHHhhhhhchhHHH-HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhh
Q 043735 73 QYCQYNSETLTLFTSSLYL-AALLSSLVASSVTRKFGRKKSM-LFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFA 150 (336)
Q Consensus 73 ~~~~~s~~~~~~~~~~~~~-~~~i~~~~~g~l~dr~Grr~~l-~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~ 150 (336)
+++|+|.+++|++.+...+ +..++.+++++ +||+|||+.+ ..+.++..+...+.+++++++.+++.+.+.+...+..
T Consensus 44 ~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 122 (393)
T PRK15011 44 DEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTA 122 (393)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhh
Confidence 3448999999999776655 55666656666 9999999875 4556666677777788889988776665555555567
Q ss_pred hhhHHHHhhhcCCCccc--hhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHh-hcccCCCh
Q 043735 151 NQSVPLYLSEMAPYKYR--GALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIG-SLVLPDTP 226 (336)
Q Consensus 151 ~~~~~~~~~~~~~~~~r--~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~e~~ 226 (336)
.+....+..|+.++++| +...+..+.+.++|..++|++++.+.+. .|||..|+..++..++..+. .+++||.+
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~---~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 198 (393)
T PRK15011 123 NPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMG---FSFTVMYLSAAVAFIVCGVMVWLFLPSMR 198 (393)
T ss_pred HHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHh---cChHHHHHHHHHHHHHHHHHHHhhcCccC
Confidence 78888888888877666 3445788889999999999999999873 57999998877766555444 34577764
No 84
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.76 E-value=1.6e-17 Score=169.57 Aligned_cols=223 Identities=14% Similarity=0.070 Sum_probs=154.7
Q ss_pred chhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHH---HHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHH
Q 043735 80 ETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLF---GGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVPL 156 (336)
Q Consensus 80 ~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~---~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~~ 156 (336)
...++..+++.+.+.++++++|+++||+|||+++.. ..+..++..+.....++++.++++|+++|++.+...+...+
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a 131 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYS 131 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHH
Confidence 446888889999999999999999999999997643 22222332333334578999999999999999999999999
Q ss_pred HhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCCChHHHHhcCChH
Q 043735 157 YLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPDTPNSMIERGQRD 236 (336)
Q Consensus 157 ~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 236 (336)
++.|++|+++|++++++.+++.++|.+++|.+++++... .+|++.|+...+..++..++.+++|+++... .+...
T Consensus 132 ~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 206 (1140)
T PRK06814 132 ILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATIS---GNFVILVALLMGIAVLGWLASLFIPKTGNAA--PDLKI 206 (1140)
T ss_pred hhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhc---cccHHHHHHHHHHHHHHHHHHhhCCCCCCCC--CCCee
Confidence 999999999999999999999999999999999999874 4699888555555555555556676654210 00000
Q ss_pred HHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHcHHHHHHh-cCC
Q 043735 237 EAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPVLFNT-IGF 315 (336)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~ 315 (336)
. . ...++ ....++.+.+++. ++...+..+........+..+.|.++++ +|.
T Consensus 207 ~-------------~-~~~~~----------~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~ 258 (1140)
T PRK06814 207 D-------------R-NIIRS----------TITLLKYAKADKR----IWLAILGISWFWLVGAVVLSQLPLLAKETLGG 258 (1140)
T ss_pred c-------------c-chHHH----------HHHHHHHHhcCch----HHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCC
Confidence 0 0 00000 0012333333332 2233333333333344566678888754 799
Q ss_pred CCcHHHHHHHHHhHhhheec
Q 043735 316 GNDASLMSAVITGLVNACAT 335 (336)
Q Consensus 316 s~~~~~~~~~~~~~~~~~~~ 335 (336)
+....+++.+..+++.++|.
T Consensus 259 ~~~~~g~~~~~~~~g~~ig~ 278 (1140)
T PRK06814 259 DENVATLFLAVFSVGVAVGS 278 (1140)
T ss_pred chHHHHHHHHHHHHHHHHHH
Confidence 99999999988888877764
No 85
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.76 E-value=7.8e-17 Score=145.32 Aligned_cols=219 Identities=13% Similarity=0.048 Sum_probs=145.7
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHH-HHHHHH-HHHHhhhhHHHHHHHHHHHhhhhhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGV-LFFAGA-LINGFAQGVWMLIVGRLLLGFGIGFANQS 153 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~-~~~i~~-~~~~~~~~~~~~~~~r~l~g~~~~~~~~~ 153 (336)
|+|.++++++.++..+...++++++|+++||+|||........ ...+.. ..+..+++++.+++.|.+++.+.+...+.
T Consensus 35 g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~ 114 (382)
T TIGR00902 35 GLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFSAGAHNAWLLFIAIGLFALFFSAGMPI 114 (382)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHccchhH
Confidence 8999999999999999999999999999999998543322211 111122 23345788999999999999988888888
Q ss_pred HHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCCChHHHHhcC
Q 043735 154 VPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPDTPNSMIERG 233 (336)
Q Consensus 154 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 233 (336)
...+..++ +++|++..+......++|..++|++++.+.+. +|||..|.+.....++..+ .+.++++++. ++
T Consensus 115 ~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~---~g~~~~f~~~~~~~~~~~~-~~~~~~~~~~---~~ 185 (382)
T TIGR00902 115 GDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGM---FDEQNILAILTAGLAFMLI-GFLIKPTIPP---KD 185 (382)
T ss_pred HHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHH---cChhHHHHHHHHHHHHHHH-HHHcCCCCCC---Cc
Confidence 88887664 46789999999999999999999999999874 5799988766544332222 2333333210 00
Q ss_pred ChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHcHHHHHHhc
Q 043735 234 QRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPVLFNTI 313 (336)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (336)
+. + +++.++..+.++++|++ + ++...+..++..........+.|.++++.
T Consensus 186 ~~-~-------------------------~~~~~~~~~~~~~l~~~---~-~~~~l~~~~l~~~~~~~~~~~~~~~l~~~ 235 (382)
T TIGR00902 186 AI-P-------------------------EDESQGDSAFIALLKNP---M-NLRFLAAVCLIQGAHAAYYGFSAIYWQAA 235 (382)
T ss_pred cc-c-------------------------ccccccchhHHHHHcCh---H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 00 0 00000011233444443 2 22233333333344556667888888889
Q ss_pred CCCCcHHHHHHHHHhHhhhe
Q 043735 314 GFGNDASLMSAVITGLVNAC 333 (336)
Q Consensus 314 G~s~~~~~~~~~~~~~~~~~ 333 (336)
|++..+.+....+..+..++
T Consensus 236 g~s~~~~g~l~~~~~~~~i~ 255 (382)
T TIGR00902 236 GISASATGLLWGIGVLAEII 255 (382)
T ss_pred CCCHhHHHHHHHHHHHHHHH
Confidence 99999999887766655544
No 86
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.75 E-value=8.9e-17 Score=164.37 Aligned_cols=229 Identities=14% Similarity=0.051 Sum_probs=151.3
Q ss_pred CchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHH---hhhhHHHHHHHHHHHhhhhhhhhhhHH
Q 043735 79 SETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALING---FAQGVWMLIVGRLLLGFGIGFANQSVP 155 (336)
Q Consensus 79 ~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~---~~~~~~~~~~~r~l~g~~~~~~~~~~~ 155 (336)
....+++.+++.++..++++++|+++||+|||++++++.++.++..++.. ..++++.++++|++.|++.+...+...
T Consensus 46 ~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 125 (1146)
T PRK08633 46 VILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKY 125 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHH
Confidence 34568999999999999999999999999999999998877666654443 356799999999999999999999999
Q ss_pred HHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccC------CchhHHHHhhhHHH-HHHHHHhhcccCCChHH
Q 043735 156 LYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKG------GWGWRLSLGGAMVP-ALIITIGSLVLPDTPNS 228 (336)
Q Consensus 156 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~------~~~w~~~~~~~~~~-~~~~~~~~~~~~e~~~~ 228 (336)
+++.|++|+++|++++++...+..+|.++++.+++++..... ..+|++.+.+..+. .++..+..+.+||.++.
T Consensus 126 ~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (1146)
T PRK08633 126 GIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAA 205 (1146)
T ss_pred hhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCC
Confidence 999999999999999999999999999999999998876410 01233333333322 33333444566776532
Q ss_pred HHhcCChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHcHHH
Q 043735 229 MIERGQRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPV 308 (336)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (336)
...+.+.+ ...... .....++.+++++..+. ..+..++..........+.|.
T Consensus 206 ~~~~~~~~--------------~~~~~~----------~~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 257 (1146)
T PRK08633 206 APEVFDKK--------------KYLFPK----------LLWRNLKLLRSDRVLWL----AIIGLSYFWFISQLAQANFPA 257 (1146)
T ss_pred Cccccccc--------------ccccHH----------HHHHHHHHHhcCcHHHH----HHHHHHHHHHHHHHHHHhhHH
Confidence 11000000 000000 00112333333332222 222222222233344556666
Q ss_pred HH-HhcCCCCc-HHHHHHHHHhHhhheec
Q 043735 309 LF-NTIGFGND-ASLMSAVITGLVNACAT 335 (336)
Q Consensus 309 ~~-~~~G~s~~-~~~~~~~~~~~~~~~~~ 335 (336)
++ +.+|++.. ..+++.+..+++.++++
T Consensus 258 ~~~~~~g~s~~~~~g~~~~~~~ig~~~g~ 286 (1146)
T PRK08633 258 YAKEVLGLDNTFQVQYLLAASAIGIGIGS 286 (1146)
T ss_pred HHHHHhCCCcHHHHHHHHHHHHHHHHHHH
Confidence 66 55899988 88888888887766653
No 87
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.74 E-value=4.4e-16 Score=134.49 Aligned_cols=247 Identities=13% Similarity=0.133 Sum_probs=185.0
Q ss_pred HHHHHhhhccccccccchhhHHhhhccchhhhcccCCCCcccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHH
Q 043735 33 GGLIFGYDIGISGGVTSMPSFLKRFFPSVYRKQQANSSTNQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKS 112 (336)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~ 112 (336)
.++..|......... +|.+.+.| +++..+++.+...++.++.+++++.|++.+|+|+|+-
T Consensus 21 lFfl~G~~~~l~diL--ip~l~~~f------------------~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~g 80 (422)
T COG0738 21 LFFLWGFITCLNDIL--IPHLKEVF------------------DLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAG 80 (422)
T ss_pred HHHHHHHHhhcchhh--HHHHHHHh------------------CccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHH
Confidence 346667666655533 46665555 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH---hhhhHHHHHHHHHHHhhhhhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHH
Q 043735 113 MLFGGVLFFAGALING---FAQGVWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLN 189 (336)
Q Consensus 113 l~~~~~~~~i~~~~~~---~~~~~~~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~ 189 (336)
++.++.++++++.+.. ...++..++++-++.|.|.+...+.+.+++..+.+++.-...+.+.+...++|..++|+++
T Consensus 81 i~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g 160 (422)
T COG0738 81 IVLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLG 160 (422)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHH
Confidence 9999999999998774 5568899999999999999999999999999999998888999999999999999999999
Q ss_pred HHhhcccC----------------CchhHHHHhhhHHHHHHHHHhhcc--cCCChHHHHhcCChHHHHHHHHHHcCCCcc
Q 043735 190 YFFAKIKG----------------GWGWRLSLGGAMVPALIITIGSLV--LPDTPNSMIERGQRDEAREKLRKIRGVNDV 251 (336)
Q Consensus 190 ~~~~~~~~----------------~~~w~~~~~~~~~~~~~~~~~~~~--~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (336)
+.+..... -..|+++|...+...++..+.... .|+.+..
T Consensus 161 ~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~----------------------- 217 (422)
T COG0738 161 SSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVA----------------------- 217 (422)
T ss_pred HHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcc-----------------------
Confidence 88775200 013777777666655544444333 2332200
Q ss_pred hHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHcHHHHHHh-cCCCCcHHHHHHHHHhHh
Q 043735 252 DEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPVLFNT-IGFGNDASLMSAVITGLV 330 (336)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~s~~~~~~~~~~~~~~ 330 (336)
+++..+++.....+++|++ .+....+..++..........|++.++.+ .|++..++....+....+
T Consensus 218 ---------~~~~~~~~~~~~~~l~~~~----~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~ 284 (422)
T COG0738 218 ---------APSLGASGSAGLSSLFQNK----HLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVG 284 (422)
T ss_pred ---------cccccccccchHHHHHhCh----HHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHH
Confidence 0000000011334445444 34445555666666667778899999877 899999999999998888
Q ss_pred hheec
Q 043735 331 NACAT 335 (336)
Q Consensus 331 ~~~~~ 335 (336)
.++|+
T Consensus 285 ~~vGR 289 (422)
T COG0738 285 FMVGR 289 (422)
T ss_pred HHHHH
Confidence 88775
No 88
>PTZ00207 hypothetical protein; Provisional
Probab=99.74 E-value=7.1e-16 Score=143.41 Aligned_cols=147 Identities=18% Similarity=0.143 Sum_probs=118.6
Q ss_pred cccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhh------hhHHHHHHHHHHHhh
Q 043735 72 NQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFA------QGVWMLIVGRLLLGF 145 (336)
Q Consensus 72 ~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~------~~~~~~~~~r~l~g~ 145 (336)
++++|+|.++.+++.+.. ....+++++.|++.||+|||+++.++.+++.+++++++++ ++++.+.+.|++.|+
T Consensus 54 ~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~ 132 (591)
T PTZ00207 54 QARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTL 132 (591)
T ss_pred HHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHH
Confidence 445599999999988774 3455678889999999999999999999999999999887 589999999999999
Q ss_pred hhhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHH-HHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhh-cccC
Q 043735 146 GIGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIA-NVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGS-LVLP 223 (336)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~-~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~ 223 (336)
+.+...+.....+.+++| ++||++.++...+.++|+.+. ++..+++.+ +|+..+++.+++.++..+.. ++++
T Consensus 133 G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~-----~~~~~fl~l~vl~~vv~ll~~~~vr 206 (591)
T PTZ00207 133 GCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSD-----NTSAYFFFLMSFALVVGILAIVFMR 206 (591)
T ss_pred HHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hHHHHHHHHHHHHHHHHHHHHhhee
Confidence 999988988999999997 679999999999999999764 444444432 57777777777665554444 4444
Q ss_pred CC
Q 043735 224 DT 225 (336)
Q Consensus 224 e~ 225 (336)
+.
T Consensus 207 ~p 208 (591)
T PTZ00207 207 LP 208 (591)
T ss_pred CC
Confidence 43
No 89
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.71 E-value=2.8e-17 Score=141.05 Aligned_cols=149 Identities=21% Similarity=0.235 Sum_probs=136.1
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhh
Q 043735 73 QYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQ 152 (336)
Q Consensus 73 ~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~ 152 (336)
.+.+-+.+++|++.+...+...+.+++.|.+.||+|+|-.+++|++.+..++++.++.++++.+++.|.++|+|.+...+
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~t 178 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADT 178 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHh
Confidence 34455688899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHhhhcCCCcc-chhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCC
Q 043735 153 SVPLYLSEMAPYKY-RGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPD 224 (336)
Q Consensus 153 ~~~~~~~~~~~~~~-r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e 224 (336)
...++++|.+|++. |++++|+...+.++|..+||+.++.+.+.. |.+..|++.+++.++-..+.+++-|
T Consensus 179 sglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~---Gk~aPFlVL~~v~Lld~~L~l~vi~ 248 (464)
T KOG3764|consen 179 SGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFA---GKSAPFLVLAIVLLLDGALQLLVIE 248 (464)
T ss_pred hhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhc---CCcCcHHHHHHHHHHHHHHHHheeC
Confidence 99999999998876 799999999999999999999999999854 5889999988888877777665533
No 90
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.71 E-value=3e-15 Score=138.57 Aligned_cols=138 Identities=25% Similarity=0.366 Sum_probs=113.5
Q ss_pred CchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHh
Q 043735 79 SETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVPLYL 158 (336)
Q Consensus 79 ~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~~~~ 158 (336)
.....|+.+...++.+++.++.|.++|.+|||++++.+.++..+++++++.++|...++++..+.|++.|.... ....+
T Consensus 77 ~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~~-~~~~i 155 (599)
T PF06609_consen 77 SDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQEL-AALAI 155 (599)
T ss_pred CccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHHH-HHHHH
Confidence 45668999999999999999999999999999999999999999999999999999999999999999777654 45668
Q ss_pred hhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhc
Q 043735 159 SEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSL 220 (336)
Q Consensus 159 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 220 (336)
+|..|.|.|+....+...........++.++..+.. +.+|||.|++..+...+.++..+
T Consensus 156 sEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~---~~~WRw~~~~~~i~~~i~~vl~~ 214 (599)
T PF06609_consen 156 SELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAA---HSGWRWIFYIFIIWSGIALVLIF 214 (599)
T ss_pred HHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhcc---CCCcchHHHHHHHHHHHHHHHHH
Confidence 999999999887776665555555566666655543 34799999988777665555443
No 91
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.71 E-value=1.5e-15 Score=137.68 Aligned_cols=145 Identities=15% Similarity=0.090 Sum_probs=108.0
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHH---Hhhh-----hHHHHHHHHHHHhhh
Q 043735 75 CQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALIN---GFAQ-----GVWMLIVGRLLLGFG 146 (336)
Q Consensus 75 ~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~---~~~~-----~~~~~~~~r~l~g~~ 146 (336)
+|+|..+.+++.++..++..+++++.|+++||+|||++++.+.+..+++.... .+.+ ....+.+.+++.|++
T Consensus 33 ~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 112 (396)
T TIGR00882 33 NGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFV 112 (396)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 38899999999999999999999999999999999999988776665544322 1111 233456678888888
Q ss_pred hhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcc-cCCC
Q 043735 147 IGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLV-LPDT 225 (336)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~e~ 225 (336)
.+...+....+..|..+ +++...+......++|..++|.+++.+.+ .+|+..|++.++..++..+..++ .||+
T Consensus 113 ~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~~----~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 186 (396)
T TIGR00882 113 FSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGILFS----IDPQIVFWLGSGFALILMLLLMFAKPKA 186 (396)
T ss_pred hccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhhhc----cCchHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 88878887777777533 34456667777788999999999887764 47999998877776665554443 3443
No 92
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.70 E-value=2.2e-15 Score=139.38 Aligned_cols=141 Identities=18% Similarity=0.263 Sum_probs=125.6
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHhHHhhhh-hchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhh
Q 043735 75 CQYNSETLTLFTSSLYLAALLSSLVASSVTRK-FGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQS 153 (336)
Q Consensus 75 ~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~ 153 (336)
+|++..+.+++.+.+.++..++++++|+++|| +|||+++.++.++.+++.++.+++++++.+.+.|++.|++.|...+.
T Consensus 43 lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~ 122 (475)
T TIGR00924 43 LGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKAN 122 (475)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCC
Confidence 48999999999999999999999999999999 89999999999999999999998888888889999999999999999
Q ss_pred HHHHhhhcCCCcc---chhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHh
Q 043735 154 VPLYLSEMAPYKY---RGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIG 218 (336)
Q Consensus 154 ~~~~~~~~~~~~~---r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 218 (336)
...+++|++|+++ |+++.++++.+.++|..++|.+++.+.+ ..||++.|.+.++..++..+.
T Consensus 123 ~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~---~~g~~~~f~~~~~~~~~~~l~ 187 (475)
T TIGR00924 123 PSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAE---NYGYHVGFNLAAVGMVIGLLT 187 (475)
T ss_pred HHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHH---hcChHHHHHHHHHHHHHHHHH
Confidence 9999999998764 8889999999999999999999999887 357999998766544444333
No 93
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.70 E-value=5.2e-16 Score=143.64 Aligned_cols=134 Identities=17% Similarity=0.203 Sum_probs=119.0
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHhHHhhhh-hchhHHHHHHHHHHHHHHHHHHhhhhHHH-HHHHHHHHhhhhhhhh
Q 043735 74 YCQYNSETLTLFTSSLYLAALLSSLVASSVTRK-FGRKKSMLFGGVLFFAGALINGFAQGVWM-LIVGRLLLGFGIGFAN 151 (336)
Q Consensus 74 ~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~~~~~~i~~~~~~~~~~~~~-~~~~r~l~g~~~~~~~ 151 (336)
++|++.++.+++.+.+.....+..+++|+++|| +|||+++.++.+++.++.+.++++.+... ++++|.++|++.|...
T Consensus 44 ~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~ 123 (489)
T PRK10207 44 QLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFK 123 (489)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhcccccc
Confidence 348999999999999998888889999999999 99999999999999999999988765443 5578999999999999
Q ss_pred hhHHHHhhhcCCCcc--chhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHH
Q 043735 152 QSVPLYLSEMAPYKY--RGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMV 210 (336)
Q Consensus 152 ~~~~~~~~~~~~~~~--r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~ 210 (336)
+...+++.|.+|+++ |+++.++++.+.++|..++|.+++++.+. .|||+.|++.++
T Consensus 124 ~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~---~gw~~~F~i~~i 181 (489)
T PRK10207 124 ANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADK---FGYSVTYNLCGA 181 (489)
T ss_pred CCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHh---hChHHHHHHHHH
Confidence 999999999998874 47789999999999999999999999884 579999987544
No 94
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.67 E-value=9.6e-15 Score=133.45 Aligned_cols=142 Identities=18% Similarity=0.106 Sum_probs=95.4
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHH---hhhh-----HHHHHHHHHHHhhh
Q 043735 75 CQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALING---FAQG-----VWMLIVGRLLLGFG 146 (336)
Q Consensus 75 ~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~---~~~~-----~~~~~~~r~l~g~~ 146 (336)
+|+|..+.+++.++..++..++++++|+++||+|||++++++..+.+++..... ..+. .....+++++.|.+
T Consensus 41 ~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (420)
T PRK09528 41 NGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFG 120 (420)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 389999999999999999999999999999999999999887666555443221 1111 11112223333333
Q ss_pred hhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhccc
Q 043735 147 IGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVL 222 (336)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 222 (336)
.....+....+..+ . .++|+...+......++|..++|++++.+.+ .+|++.|+..++..++..+..+++
T Consensus 121 ~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~----~~~~~~f~~~~~~~~~~~~~~~~~ 190 (420)
T PRK09528 121 FLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFN----INPQINFWLGSGSALILLVLLFFA 190 (420)
T ss_pred hccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHh----cCchHhHHHHHHHHHHHHHHHhcc
Confidence 22222333233222 2 2346777888888889999999999998875 368889988777766555555444
No 95
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.64 E-value=2.2e-14 Score=132.83 Aligned_cols=224 Identities=18% Similarity=0.220 Sum_probs=154.2
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhh-----hhHHHHHHHHHHHhhhhhhhh
Q 043735 77 YNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFA-----QGVWMLIVGRLLLGFGIGFAN 151 (336)
Q Consensus 77 ~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~-----~~~~~~~~~r~l~g~~~~~~~ 151 (336)
-|+..++++..+..+...+.++++|.++||++||++++.+-++..+..+..++. .+.+.+++.-++.|++.+...
T Consensus 42 ~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~ 121 (524)
T PF05977_consen 42 GSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFN 121 (524)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHH
Confidence 367788999999999999999999999999999999999988877665444332 367888999999999999999
Q ss_pred hhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCCChHHHHh
Q 043735 152 QSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPDTPNSMIE 231 (336)
Q Consensus 152 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 231 (336)
|...+++.|..|+++...++++.++..++...+||.+++.+... .|-.+.|.+.++..++.++....++..++ .
T Consensus 122 PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~---~G~~~~f~inalsfl~~i~~l~~~~~~~~---~ 195 (524)
T PF05977_consen 122 PAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAF---FGAAAAFLINALSFLISILALLRWKPPPP---P 195 (524)
T ss_pred HHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHcccccc---c
Confidence 99999999999999999999999999999999999999998874 35666777666554443333333332210 0
Q ss_pred cCChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHcHHHHHH
Q 043735 232 RGQRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPVLFN 311 (336)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (336)
+...++ . -.++. +..++-+.+++..+.......+ +.+ ....+...+|.+.+
T Consensus 196 ~~~~~e---~------------~~~~l----------~~G~ryv~~~~~l~~~l~~~~~---~~l-~~~a~~aLlPl~a~ 246 (524)
T PF05977_consen 196 SSLPRE---R------------FFSAL----------REGLRYVRSSPPLRSVLLRSFL---FNL-FASAVWALLPLFAR 246 (524)
T ss_pred cccchh---h------------hhhhH----------HHHHHHHhcchHHHHHHHHHHH---HHH-hhhHHHHhhhHHHH
Confidence 000000 0 00000 1112222222222222211111 111 12233445677774
Q ss_pred -hcCCCCcHHHHHHHHHhHhhheec
Q 043735 312 -TIGFGNDASLMSAVITGLVNACAT 335 (336)
Q Consensus 312 -~~G~s~~~~~~~~~~~~~~~~~~~ 335 (336)
.+|.++...+++.+..+++.++|.
T Consensus 247 ~~l~~~a~~yGll~a~~gvGai~Ga 271 (524)
T PF05977_consen 247 DVLGGGASGYGLLLAAFGVGAILGA 271 (524)
T ss_pred HHhCCcHHHHHHHHHHHHHHHHHHH
Confidence 579999999999999999998875
No 96
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.63 E-value=4.5e-15 Score=113.70 Aligned_cols=135 Identities=27% Similarity=0.406 Sum_probs=117.1
Q ss_pred HHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHhhhcCCCcc
Q 043735 87 SSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYKY 166 (336)
Q Consensus 87 ~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~ 166 (336)
+...++..+++++.|++.||+|||+.+..+..+..++.+.....++++.+.+.+++.|++.+...+....++.|.+|+++
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 84 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEE 84 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhh
Confidence 44567888999999999999999999999999999998888888899999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhc-ccCC
Q 043735 167 RGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSL-VLPD 224 (336)
Q Consensus 167 r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~-~~~e 224 (336)
|++..+..+....+|..+++.+.+.+.+. .+|++.+++.+...++..+..+ +.||
T Consensus 85 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 85 RGVALGLMSAGIALGPLLGPPLGGVLAQF---LGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhHHHHHHHHhHHHHHHHhHHhHHHHhcc---cchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 99999999999999999999999988763 4698888877766665555443 4444
No 97
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.63 E-value=3.7e-15 Score=136.80 Aligned_cols=153 Identities=12% Similarity=0.118 Sum_probs=117.0
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHhHHhhhh----hchh-HHHHHHHHHHHHHHHHHHhhhh------HHHHHHHHHH
Q 043735 74 YCQYNSETLTLFTSSLYLAALLSSLVASSVTRK----FGRK-KSMLFGGVLFFAGALINGFAQG------VWMLIVGRLL 142 (336)
Q Consensus 74 ~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr----~Grr-~~l~~~~~~~~i~~~~~~~~~~------~~~~~~~r~l 142 (336)
++|++..++|++.++..+..++..++.|+++|| +||| +.++.+....+++.+++...++ ...+.+.+++
T Consensus 29 ~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (437)
T TIGR00792 29 VLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITYIL 108 (437)
T ss_pred ccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHH
Confidence 349999999999999999999999999999998 6874 4677787888888777766543 3556677788
Q ss_pred HhhhhhhhhhhHHHHhhhcC-CCccchhHHHHHHHHHHHHHHHHHHHHHHhhccc----CCchhHHHHhhhHHHHHHHHH
Q 043735 143 LGFGIGFANQSVPLYLSEMA-PYKYRGALNIGFQLSITIGILIANVLNYFFAKIK----GGWGWRLSLGGAMVPALIITI 217 (336)
Q Consensus 143 ~g~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~----~~~~w~~~~~~~~~~~~~~~~ 217 (336)
.+++.+.......++..|.. ++++|++..+..+.+..+|..+++.+.+.+.... ...+|++.+.+.+++.++..+
T Consensus 109 ~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~ 188 (437)
T TIGR00792 109 LGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLI 188 (437)
T ss_pred HHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHH
Confidence 88888877777778888887 5688999999988888888877776665554321 135899998887777665554
Q ss_pred hh-cccCCCh
Q 043735 218 GS-LVLPDTP 226 (336)
Q Consensus 218 ~~-~~~~e~~ 226 (336)
.. ++.+|++
T Consensus 189 ~~~~~~~e~~ 198 (437)
T TIGR00792 189 ICFFGTKERY 198 (437)
T ss_pred HHHcCCEecC
Confidence 43 5566653
No 98
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.62 E-value=3.7e-14 Score=131.94 Aligned_cols=137 Identities=16% Similarity=0.246 Sum_probs=114.8
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHhHHhhhh-hchhHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHhhhhhhhhh
Q 043735 75 CQYNSETLTLFTSSLYLAALLSSLVASSVTRK-FGRKKSMLFGGVLFFAGALINGFAQ-GVWMLIVGRLLLGFGIGFANQ 152 (336)
Q Consensus 75 ~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~~~~~~i~~~~~~~~~-~~~~~~~~r~l~g~~~~~~~~ 152 (336)
+|++.++.+++.+.+........+++|+++|| +|||+++..+.++.+++..++++++ +.+.+.+.|++.|++.|...+
T Consensus 52 lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~ 131 (500)
T PRK09584 52 LGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKA 131 (500)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccC
Confidence 48899988888888776666667899999999 5999999999999999988888764 456677889999999998888
Q ss_pred hHHHHhhhcCCCcc--chhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHH
Q 043735 153 SVPLYLSEMAPYKY--RGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALI 214 (336)
Q Consensus 153 ~~~~~~~~~~~~~~--r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~ 214 (336)
....++.|++|+++ |..+.++++.+.++|..++|.+.+++.+ ..|||+.|.+.++...+
T Consensus 132 ~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~---~~g~~~~F~i~~i~~~i 192 (500)
T PRK09584 132 NPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAA---KYGWSVAFALSVVGMLI 192 (500)
T ss_pred CHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHH---hhCHHHHHHHHHHHHHH
Confidence 88899999998654 4567888899999999999999999987 35799999876654333
No 99
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.60 E-value=2.8e-14 Score=136.65 Aligned_cols=141 Identities=18% Similarity=0.054 Sum_probs=121.3
Q ss_pred hHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHhhhc
Q 043735 82 LTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVPLYLSEM 161 (336)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~~~~~~~ 161 (336)
..+...+..++.+++.++.|+++||+|||++++.+.++.++++++.++.++...+++.+++.|++.++.++....+++|+
T Consensus 597 ~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl 676 (742)
T TIGR01299 597 IYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVEL 676 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556677789999999999999999999999999999999999888888877888888999998888889999999999
Q ss_pred CCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCCCh
Q 043735 162 APYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPDTP 226 (336)
Q Consensus 162 ~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~ 226 (336)
+|+++|++++++.+....+|.+++|++++.+... +...++++.++..++..++.+++||+.
T Consensus 677 ~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~----~~~~pf~i~a~~lll~~ll~~~LPET~ 737 (742)
T TIGR01299 677 YPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI----TKAAPILFASAALACGGLLALKLPDTR 737 (742)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----hhHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 9999999999999999999999999999877652 345566666666666666666779875
No 100
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.59 E-value=2.6e-13 Score=122.86 Aligned_cols=145 Identities=18% Similarity=0.177 Sum_probs=119.2
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHH
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVP 155 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~ 155 (336)
|++..+.+++.+...++..++.++.|+++||+|||+.+..+.+...+........++.+.+.+.+++.+++.+...+...
T Consensus 248 ~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~~ 327 (393)
T PRK15011 248 HLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIGM 327 (393)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78888889888888888889999999999999999988877766665555555567777778888888888887777777
Q ss_pred HHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCC
Q 043735 156 LYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPD 224 (336)
Q Consensus 156 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e 224 (336)
.+..|.+|+ +|+++.++++....+|..+++.+++.+.+. +||+..+++..++.++..+..++.||
T Consensus 328 ~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 328 LYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEI---WNYHAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHH---hhhHHHHHHHHHHHHHHHHHHHhhcC
Confidence 888999985 589999999999999999999999998874 57999988877777776666666654
No 101
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.58 E-value=8.4e-14 Score=127.55 Aligned_cols=133 Identities=17% Similarity=0.277 Sum_probs=109.9
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhh-chhHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHhhhhhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKF-GRKKSMLFGGVLFFAGALINGFAQ-GVWMLIVGRLLLGFGIGFANQS 153 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-Grr~~l~~~~~~~~i~~~~~~~~~-~~~~~~~~r~l~g~~~~~~~~~ 153 (336)
|++..+.+.+.+.+.....++.+++|+++||+ |||+++.++.++..++.++++..+ +...+.++..+..++.|...+.
T Consensus 41 gls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~ 120 (493)
T PRK15462 41 KYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSN 120 (493)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhccccccc
Confidence 88999999999999999999999999999999 999999999999999887666433 2233444444555666666677
Q ss_pred HHHHhhhcCCCc--cchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHH
Q 043735 154 VPLYLSEMAPYK--YRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVP 211 (336)
Q Consensus 154 ~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~ 211 (336)
..++++|.+|++ +|..+.++.+.+.++|+.++|.+.+++.+ ..||++.|.+.++.
T Consensus 121 ~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~---~~Gw~~~F~iaaig 177 (493)
T PRK15462 121 VSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQE---EYSWAMGFGLAAVG 177 (493)
T ss_pred HHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHh---hhChHHHHHHHHHH
Confidence 788999999876 68999999999999999999999999977 35799999875543
No 102
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.58 E-value=1.1e-13 Score=126.14 Aligned_cols=149 Identities=15% Similarity=0.202 Sum_probs=123.5
Q ss_pred CCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhh----hHHHHHHHHHHHhhhhhhhhhh
Q 043735 78 NSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQ----GVWMLIVGRLLLGFGIGFANQS 153 (336)
Q Consensus 78 s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~----~~~~~~~~r~l~g~~~~~~~~~ 153 (336)
+.++.+...++..++..++.++.|+++||+|||+++..+.++.+++........ +.+.+++.+++.|++.+...+.
T Consensus 249 ~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~ 328 (418)
T TIGR00889 249 VVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNIS 328 (418)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 456779999999999999999999999999999999999999988876665532 2456777899999999988888
Q ss_pred HHHHhhhcCCCccchhHHHHHH-HHHHHHHHHHHHHHHHhhcccCC---chhHHHHhhhHHHHHHHHHh-hcccCCCh
Q 043735 154 VPLYLSEMAPYKYRGALNIGFQ-LSITIGILIANVLNYFFAKIKGG---WGWRLSLGGAMVPALIITIG-SLVLPDTP 226 (336)
Q Consensus 154 ~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~l~~~~~~~~~~---~~w~~~~~~~~~~~~~~~~~-~~~~~e~~ 226 (336)
...++.|++|+++|++..++.+ ....+|..++|++++.+.+..+. +||+..|.+.+++.++..+. .++++|+.
T Consensus 329 ~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~ 406 (418)
T TIGR00889 329 GSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSH 406 (418)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 8999999999999999999997 67889999999999999886543 57999888777665555444 45677663
No 103
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.57 E-value=1.4e-13 Score=125.61 Aligned_cols=151 Identities=16% Similarity=0.221 Sum_probs=114.0
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhh----hhchhHHHHHH-HHHHHHHHHHHHhhhhHH----------------
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTR----KFGRKKSMLFG-GVLFFAGALINGFAQGVW---------------- 134 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~d----r~Grr~~l~~~-~~~~~i~~~~~~~~~~~~---------------- 134 (336)
|.+....+++..+..+...+.+++.|+++| |+||||.++++ .+...++.++..++++.+
T Consensus 35 g~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i 114 (477)
T TIGR01301 35 GIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAI 114 (477)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHH
Confidence 889999999999999999999999999999 59999998875 556666666666665532
Q ss_pred -HHHHHHHHHhhhhhhhhhhHHHHhhhcCCCccc--hhHHHHHHHHHHHHHHHHHHHHHHhh--cccC----------Cc
Q 043735 135 -MLIVGRLLLGFGIGFANQSVPLYLSEMAPYKYR--GALNIGFQLSITIGILIANVLNYFFA--KIKG----------GW 199 (336)
Q Consensus 135 -~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~r--~~~~~~~~~~~~~g~~~~~~l~~~~~--~~~~----------~~ 199 (336)
..+++..+..++....++...++++|..|+++| +.+.++.+...++|+.+++.+++... +..+ ..
T Consensus 115 ~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~ 194 (477)
T TIGR01301 115 IVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCA 194 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccc
Confidence 223333344557777888888999999998865 57899999999999999999888652 1110 02
Q ss_pred hhHHHHhhhHHHHHHHHHhh-cccCCCh
Q 043735 200 GWRLSLGGAMVPALIITIGS-LVLPDTP 226 (336)
Q Consensus 200 ~w~~~~~~~~~~~~~~~~~~-~~~~e~~ 226 (336)
+.+..|++.++..++..+.. ++.+|.|
T Consensus 195 ~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 195 NLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 57888888777665555544 5678865
No 104
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.55 E-value=7.1e-13 Score=119.95 Aligned_cols=215 Identities=9% Similarity=-0.047 Sum_probs=135.0
Q ss_pred cCCCchhHHH--HHHHHHHHHHHHHHh-HHhhhhhchhHHHHHHHHHH-HHHHHHHH---hhhh-HHHHHHHHHHHhhhh
Q 043735 76 QYNSETLTLF--TSSLYLAALLSSLVA-SSVTRKFGRKKSMLFGGVLF-FAGALING---FAQG-VWMLIVGRLLLGFGI 147 (336)
Q Consensus 76 ~~s~~~~~~~--~~~~~~~~~i~~~~~-g~l~dr~Grr~~l~~~~~~~-~i~~~~~~---~~~~-~~~~~~~r~l~g~~~ 147 (336)
|.|.+++|.+ .+...+...+.+++. ++..||+||||..++...+. +++..... ...+ ...+....++.++..
T Consensus 32 g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (390)
T TIGR02718 32 GAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAVGLLACASLAS 111 (390)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHH
Confidence 8999999997 466677787888887 55799999998865554332 22222222 1222 333344455566666
Q ss_pred hhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCCChH
Q 043735 148 GFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPDTPN 227 (336)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~ 227 (336)
+...+....+..|..++++++...+....+..+|..+++.+.+.+.+. .|||..|++.++..++..+..++++|+++
T Consensus 112 a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~---~gw~~~f~~~a~l~~~~~~~~~~~~~~~~ 188 (390)
T TIGR02718 112 ATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGK---FGQRPAFLLVACVPLASLVCVLWLKDRAV 188 (390)
T ss_pred HHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCHHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 777777778888999888888888888888899999999888887763 57999999888776665555555544321
Q ss_pred HHHhcCChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHcHH
Q 043735 228 SMIERGQRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAP 307 (336)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (336)
. +++.+ +++..+.++.+|++..+...... ++..........+.+
T Consensus 189 ~---~~~~~-----------------------------~~~~~~~~~~l~~~~~~~~~~~~----~l~~~~~~~~~~~~~ 232 (390)
T TIGR02718 189 A---SPEAP-----------------------------LARRASLFRFFRRPLAWSLLALA----LLSAMTAVSGFGLSK 232 (390)
T ss_pred C---ccccc-----------------------------hhhHHHHHHHHcCcCHHHHHHHH----HHHHHHHHHHHHHhh
Confidence 0 00000 00011233445544333322222 222222334445667
Q ss_pred HHHHhcCCCCcHHHHHHHHHhH
Q 043735 308 VLFNTIGFGNDASLMSAVITGL 329 (336)
Q Consensus 308 ~~~~~~G~s~~~~~~~~~~~~~ 329 (336)
.++++.|++.++.+......++
T Consensus 233 ~~l~~~G~s~~~ig~~~~~~~~ 254 (390)
T TIGR02718 233 LYLVDAGWPLEWIGRLGMAGGA 254 (390)
T ss_pred HHHHhcCCCHHHHHHHHhHHHH
Confidence 7777899999999888766543
No 105
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.55 E-value=1.2e-13 Score=126.02 Aligned_cols=144 Identities=13% Similarity=-0.024 Sum_probs=102.1
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhch-hHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhh
Q 043735 73 QYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGR-KKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFAN 151 (336)
Q Consensus 73 ~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Gr-r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~ 151 (336)
+++|+|.+++|++.++..++..++++++|.++||+|| |+++..+.++..+...+..+.++++.+.+.|++.|++.+...
T Consensus 31 ~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 110 (418)
T TIGR00889 31 KTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLANSLAYMPTI 110 (418)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHccHH
Confidence 3448999999999999999999999999999999965 778888888888888888888889999999999999877666
Q ss_pred hhHHHHhh--------hcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccC
Q 043735 152 QSVPLYLS--------EMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLP 223 (336)
Q Consensus 152 ~~~~~~~~--------~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 223 (336)
+...++.. |......|.+..+ .+|.+++|.+++.+.. ...|+. +++.++..++..+..+++|
T Consensus 111 ~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~---~~~~~~-f~~~~~~~~~~~~~~~~~~ 180 (418)
T TIGR00889 111 ALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDI---ELSNIQ-LYITAGSSALLGVFALTLP 180 (418)
T ss_pred HHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcc---cchhHH-HHHHHHHHHHHHHHHhcCC
Confidence 65554422 2222222334333 3577777777776632 123554 4444444444444556778
Q ss_pred CCh
Q 043735 224 DTP 226 (336)
Q Consensus 224 e~~ 226 (336)
|+|
T Consensus 181 e~~ 183 (418)
T TIGR00889 181 DIP 183 (418)
T ss_pred CCC
Confidence 865
No 106
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.53 E-value=9.4e-13 Score=118.30 Aligned_cols=144 Identities=19% Similarity=0.236 Sum_probs=119.3
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHH
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVP 155 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~ 155 (336)
|.+..+.+++.+.......++.++.|++.||+|||+++..+.++..+........++.+.+.+.+++.|++.+...+...
T Consensus 231 g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 310 (375)
T TIGR00899 231 GLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGM 310 (375)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77888888888887777888899999999999999999888777666665556667788888888999999888888888
Q ss_pred HHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccC
Q 043735 156 LYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLP 223 (336)
Q Consensus 156 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 223 (336)
.++.|..|+ +|+++.++++....+|..++|.+.+.+.+. .||+..++..++..++..+...+++
T Consensus 311 ~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~ 374 (375)
T TIGR00899 311 LYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAER---WSYHAVYWFAIVMLIVALFCLLLIK 374 (375)
T ss_pred HHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccchhHHHHHHHHHHHHHHHHheec
Confidence 889998876 467999999999999999999999998874 4689888887777766666655554
No 107
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.53 E-value=4e-13 Score=122.16 Aligned_cols=145 Identities=12% Similarity=0.088 Sum_probs=119.7
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHH
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVP 155 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~ 155 (336)
|++..+.+.+.+...++..++.++.|++.||+|||+.+..+.+...++.+.....++.+.+.+..++.|++.+...+...
T Consensus 251 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 330 (406)
T PRK11551 251 GLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLY 330 (406)
T ss_pred CCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHH
Confidence 78889999999999999999999999999999999999887777777766666677777777778888988888888888
Q ss_pred HHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhccc
Q 043735 156 LYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVL 222 (336)
Q Consensus 156 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 222 (336)
.++.|.+|+++|++..++.+....+|..++|.+.+.+.+..+ +|...++......+...+..+++
T Consensus 331 ~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 331 ALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGR--STVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred HHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCC--chHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999887532 46666665555554444444444
No 108
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.52 E-value=9.1e-13 Score=119.59 Aligned_cols=142 Identities=18% Similarity=0.246 Sum_probs=120.3
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHhhh
Q 043735 81 TLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVPLYLSE 160 (336)
Q Consensus 81 ~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~~~~~~ 160 (336)
+.++..+.+.++..++.++.|++.||+|||+.+..+..+.+++.+.....++.+.+++.+++.|++.+..++.....+.|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~ 329 (399)
T PRK05122 250 GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVK 329 (399)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 34666778888899999999999999999999998888888888777777888888888999999999888888888889
Q ss_pred cCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCCC
Q 043735 161 MAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPDT 225 (336)
Q Consensus 161 ~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~ 225 (336)
..|+++|+++.++++....+|..+++.+.+.+.+. .||++.+++.++..++..+..++++++
T Consensus 330 ~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 330 RVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASW---FGYPSIFLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999988873 569999988777766666655555443
No 109
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.51 E-value=4.1e-13 Score=120.40 Aligned_cols=137 Identities=14% Similarity=0.009 Sum_probs=116.1
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhH--HHHHHHHHHHhhhhhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGV--WMLIVGRLLLGFGIGFANQS 153 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~--~~~~~~r~l~g~~~~~~~~~ 153 (336)
|.+..+.+.+.+...++..+++++.|++.||+|||+.+..+.++..++.+...+.++. ..+.+..++.|++.+...+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 315 (377)
T TIGR00890 236 GLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISL 315 (377)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhc
Confidence 6777888999999999999999999999999999999999988888888777666532 33445677888888877778
Q ss_pred HHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHH
Q 043735 154 VPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALII 215 (336)
Q Consensus 154 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~ 215 (336)
...++.|.+|+++|++..++.+....+|..++|.+.+.+.+. .||++.+++.++..+++
T Consensus 316 ~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~---~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 316 FPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTE---IGFEYTFIVTGAFALTS 374 (377)
T ss_pred cHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhh---hchhhHHHHHHHHHHHh
Confidence 888999999999999999999999999999999999998873 57998888776665543
No 110
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.50 E-value=8e-13 Score=117.21 Aligned_cols=144 Identities=26% Similarity=0.356 Sum_probs=131.0
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhH-HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhH
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKK-SMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSV 154 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~-~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~ 154 (336)
|.+..+.+++.+...++..++.++.+++.||+|||+ .+..+.++..++.+.....++.+.+.+..++.|++.+...+..
T Consensus 207 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 286 (352)
T cd06174 207 GLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPAL 286 (352)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhH
Confidence 778899999999999999999999999999999999 9999999999999999888888889999999999999999999
Q ss_pred HHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhccc
Q 043735 155 PLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVL 222 (336)
Q Consensus 155 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 222 (336)
..++.|..|+++|++..++.+....+|..+++.+.+.+.+ ..+|+..+.+.+++.++..+..+++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~---~~~~~~~~~~~~~~~~i~~i~~~~~ 351 (352)
T cd06174 287 LTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLD---TGGYGGVFLILAALALLAALLLLLL 351 (352)
T ss_pred HHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---ccCcchHHHHHHHHHHHHHHHheec
Confidence 9999999999999999999999999999999999999987 3579999988888777666655443
No 111
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.50 E-value=4.5e-13 Score=122.42 Aligned_cols=148 Identities=18% Similarity=0.226 Sum_probs=123.6
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHH
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVP 155 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~ 155 (336)
+.+..+.+++.++..++..++.+++|++.||+|||+.+..+.++.+++.++..+.++.+.+++.+++.|++.+...+...
T Consensus 258 ~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 337 (420)
T PRK09528 258 EQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVF 337 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667789999999999999999999999999999999999999999888888888899889999999998888878888
Q ss_pred HHhhhcCCCccchhHHHH-HHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhh-cccCCCh
Q 043735 156 LYLSEMAPYKYRGALNIG-FQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGS-LVLPDTP 226 (336)
Q Consensus 156 ~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~e~~ 226 (336)
.++.|.+|++.|+...+. ++....+|..+++.+.+++.+. .||+..|...+++.++..+.. +..++++
T Consensus 338 ~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~---~G~~~~f~~~~~~~~i~~~~~~~~~~~~~ 407 (420)
T PRK09528 338 KYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDS---IGFQGTYLILGGIVLLFTLISVFTLSGDR 407 (420)
T ss_pred HHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHh---hCchHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 899999999999877655 6778889999999999999884 479999987776655544443 3444443
No 112
>PRK09952 shikimate transporter; Provisional
Probab=99.47 E-value=6.3e-12 Score=115.48 Aligned_cols=150 Identities=15% Similarity=0.133 Sum_probs=109.6
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHh---h-hhHHHHHHHHHHHhhhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGF---A-QGVWMLIVGRLLLGFGIGFAN 151 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~---~-~~~~~~~~~r~l~g~~~~~~~ 151 (336)
|++.+....+.....+...++.++.|+++||+|||+++..+.++..++.+.... . ++.+.+++..++.+++.+...
T Consensus 282 g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 361 (438)
T PRK09952 282 GLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVV 361 (438)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHH
Confidence 666665555566666777888999999999999999988887766555433322 1 234444555677788888888
Q ss_pred hhHHHHhhhcCCCccchhHHHH-HHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCCCh
Q 043735 152 QSVPLYLSEMAPYKYRGALNIG-FQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPDTP 226 (336)
Q Consensus 152 ~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~ 226 (336)
+..+.++.|.+|++.|+.+.++ ++.+..+|+.++|.+.+++.+..+ .+|+..+.+.++..++..+..+.++|++
T Consensus 362 ~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~-~~~~~~~~~~~~~~~i~~v~~~~~~~~~ 436 (438)
T PRK09952 362 CVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFG-GSWHSVAIYLLAGCLISAMTALLMKDNQ 436 (438)
T ss_pred HHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC-CCchHHHHHHHHHHHHHHHHHHHccccc
Confidence 8889999999999999888887 445566899999999999877432 2588777777776666666666666643
No 113
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.46 E-value=3.8e-13 Score=125.69 Aligned_cols=251 Identities=16% Similarity=0.185 Sum_probs=182.9
Q ss_pred CCCcccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhh------------------
Q 043735 69 SSTNQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFA------------------ 130 (336)
Q Consensus 69 ~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~------------------ 130 (336)
+.+++.|+++.++.|++.+.+-++..+...+..+..-|.-|-+++-++.++++++++++++-
T Consensus 121 ttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~ 200 (735)
T KOG3626|consen 121 TTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSV 200 (735)
T ss_pred hhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccc
Confidence 44577779999999999999999999999999999999999999999999999999887651
Q ss_pred --h---------------------------h----H-HHHHHHHHHHhhhhhhhhhhHHHHhhhcCCCccchhHHHHHHH
Q 043735 131 --Q---------------------------G----V-WMLIVGRLLLGFGIGFANQSVPLYLSEMAPYKYRGALNIGFQL 176 (336)
Q Consensus 131 --~---------------------------~----~-~~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 176 (336)
+ + . ..++++.++.|+|..+.++...+|+=|...+++-....++...
T Consensus 201 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~ 280 (735)
T KOG3626|consen 201 ENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYS 280 (735)
T ss_pred cCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHH
Confidence 0 0 1 2567788999999999999999999999999988999999999
Q ss_pred HHHHHHHHHHHHHHHhhcccCCc----------------hhHHHHhhhHHHHHHHHHhhcccCCChHHHHhcCChHHHHH
Q 043735 177 SITIGILIANVLNYFFAKIKGGW----------------GWRLSLGGAMVPALIITIGSLVLPDTPNSMIERGQRDEARE 240 (336)
Q Consensus 177 ~~~~g~~~~~~l~~~~~~~~~~~----------------~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 240 (336)
...+|.++|-+++++..+...++ .|+.-|++.+.+.++..+..+++|...+....+ ...+
T Consensus 281 ~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~~~~~----~~~~ 356 (735)
T KOG3626|consen 281 MAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELPKSQKR----KRAR 356 (735)
T ss_pred HHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCcccccc----chhh
Confidence 99999999999999887643221 366677777777777777778887664321111 0000
Q ss_pred HHHHHcCCCcchHHHHHHHHHHHhccccccc---hhhhccccchhHHHHHHHHHHHHHhhchhHHHHcHHHHHH-hcCCC
Q 043735 241 KLRKIRGVNDVDEEFNDLVAASEASKQVEHP---WGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPVLFN-TIGFG 316 (336)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~s 316 (336)
..+..+.+++ ..+.......+ +...+++...++++....+...+....+.++..|+|.|++ ++|.+
T Consensus 357 ~~~~~k~~~~----------~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~s 426 (735)
T KOG3626|consen 357 DLHVLKTESG----------GAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGIS 426 (735)
T ss_pred hhcccccccc----------cccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCC
Confidence 0000000000 00000000111 2222334455567888888888888889999999999995 68999
Q ss_pred CcHHHHHHHHHhHhhhe
Q 043735 317 NDASLMSAVITGLVNAC 333 (336)
Q Consensus 317 ~~~~~~~~~~~~~~~~~ 333 (336)
+..+..++...++..+.
T Consensus 427 as~An~l~G~i~vp~~~ 443 (735)
T KOG3626|consen 427 ASLANILTGSIGVPAAA 443 (735)
T ss_pred HHHHHHHhhhhhhhhhh
Confidence 99999888777666543
No 114
>PRK03699 putative transporter; Provisional
Probab=99.46 E-value=4.7e-12 Score=114.73 Aligned_cols=144 Identities=15% Similarity=0.056 Sum_probs=116.7
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHH
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVP 155 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~ 155 (336)
|+|..+.+.+.+.+.++..++.+..|+++||+|||+++.....+..+...+....++.+.+.+..++.|++.+..++...
T Consensus 237 g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~ 316 (394)
T PRK03699 237 GMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTII 316 (394)
T ss_pred CCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999888777777666666667776677778888998888888878
Q ss_pred HHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccC
Q 043735 156 LYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLP 223 (336)
Q Consensus 156 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 223 (336)
.+..|..|. ++++..+.......+|..++|.+.+.+.+. .|++..++..+++.+++.+.....+
T Consensus 317 ~~~~~~~~~-~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (394)
T PRK03699 317 TLGSQQTKV-ASPKLVNFILTCGTIGTMLTFVVTSPIVAH---FGLQAALLTANGLYAVVFVMCILLG 380 (394)
T ss_pred HHHHHHccC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHH---hCchhhhhhhHHHHHHHHHHHHHHH
Confidence 888887764 467788888888899999999999999884 4688888776666555554444433
No 115
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.46 E-value=4.2e-12 Score=117.62 Aligned_cols=146 Identities=15% Similarity=0.047 Sum_probs=108.0
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHH--HHhhhhHHHHHHHHHHHhhhhhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALI--NGFAQGVWMLIVGRLLLGFGIGFANQS 153 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~--~~~~~~~~~~~~~r~l~g~~~~~~~~~ 153 (336)
|+|..+.++..+...++..++.+++|+++||+|||+.+.....+..++... ....++.....+.+++.|++.......
T Consensus 290 g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 369 (467)
T PRK09556 290 GFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLL 369 (467)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHH
Confidence 889999999999999999999999999999999998776654444433322 223345556667788888654333333
Q ss_pred HHHHhhhcCCCccchhHHHHHHHHHHH-HHHHHHHHHHHhhcc---------cCCchhHHHHhhhHHHHHHHHHhhcc
Q 043735 154 VPLYLSEMAPYKYRGALNIGFQLSITI-GILIANVLNYFFAKI---------KGGWGWRLSLGGAMVPALIITIGSLV 221 (336)
Q Consensus 154 ~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~l~~~~~~~---------~~~~~w~~~~~~~~~~~~~~~~~~~~ 221 (336)
....+.|.+|++.||.+.++.+....+ |..++|.+.+.+.+. ....+|+..|.+..+..++..+..++
T Consensus 370 ~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 447 (467)
T PRK09556 370 IGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAI 447 (467)
T ss_pred HHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHH
Confidence 345677999999999999999988886 778999999999881 00246999998776666655554443
No 116
>PRK12382 putative transporter; Provisional
Probab=99.44 E-value=7.5e-12 Score=113.30 Aligned_cols=136 Identities=17% Similarity=0.223 Sum_probs=117.0
Q ss_pred hHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHhhhc
Q 043735 82 LTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVPLYLSEM 161 (336)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~~~~~~~ 161 (336)
.++..+...++..+++++.|++.||+|||+.+..+..+..++.++..+.++.+.+.+..++.|++.+...+.....+.|.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 330 (392)
T PRK12382 251 AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKR 330 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 45666677788899999999999999999999999888888888777778888888889999999988888888889999
Q ss_pred CCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhc
Q 043735 162 APYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSL 220 (336)
Q Consensus 162 ~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 220 (336)
+|+++||+..++++....+|..++|.+.+.+.+. .||+..+.+.+...++..+..+
T Consensus 331 ~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~---~g~~~~~~~~~~~~~~~~~~~~ 386 (392)
T PRK12382 331 VPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATS---FGYPSVFLAGAISAVLGIIVTI 386 (392)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999874 4699999887777666555443
No 117
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.43 E-value=1.8e-12 Score=119.56 Aligned_cols=140 Identities=9% Similarity=0.018 Sum_probs=113.2
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhh--chhHHHHH--HHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKF--GRKKSMLF--GGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFAN 151 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~--Grr~~l~~--~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~ 151 (336)
|++..+.+++.++..++..+++++.|+++||. ++|+...+ +.++.+++.+++...++++.+++.+++.|++.+...
T Consensus 272 g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~ 351 (455)
T TIGR00892 272 GVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVG 351 (455)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHH
Confidence 88889999999999999999999999999973 34443333 333334445555667788888889999999999988
Q ss_pred hhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHH
Q 043735 152 QSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITI 217 (336)
Q Consensus 152 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 217 (336)
+....++.|.+|+++|++..++++....+|..++|.+.+.+.+..+ +|++.|++.++..++..+
T Consensus 352 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g--~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 352 ALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATK--NYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcC--CcchHHHHhhHHHHHHHH
Confidence 9999999999999999999999999999999999999998887432 588888877666554443
No 118
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.43 E-value=2.9e-11 Score=108.86 Aligned_cols=194 Identities=14% Similarity=0.169 Sum_probs=138.3
Q ss_pred CCCCCCCCCchHHHHHHHHHHHHHHHHhhhccccccccchhhHHhhhccchhhhcccCCCCcccccCCCchhHHHHHHHH
Q 043735 11 NGKGYPGKLTPFVTVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKRFFPSVYRKQQANSSTNQYCQYNSETLTLFTSSLY 90 (336)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 90 (336)
.++.+.++.+|+...+..+.+ ++.+....++.+. +-.|.++. |.+.+.+..|++.++..
T Consensus 23 ~~~~~~~~t~wrsi~l~~~~s---fl~~v~~sI~~~s--~wpYl~~l----------------D~~A~~~ffG~viaa~s 81 (488)
T KOG2325|consen 23 LSPLDERKTNWRSIYLALLNS---FLVAVQFSIYLTS--MWPYLQKL----------------DPTATATFFGLVIAASS 81 (488)
T ss_pred cccccccCCchHhHHHHHHHH---HHHhhhheEEEee--cchhhhhc----------------CCCCCcchhhHHHHHHH
Confidence 344566677787766666655 4444444444333 23444442 12667888999999999
Q ss_pred HHHHHHHHHhHHhhhhhch-hHHHHHHHHHHHHHHHHHH-h---hh-hHHHHHHHHHHHhhhhhhhhhhHHHHhhhcCCC
Q 043735 91 LAALLSSLVASSVTRKFGR-KKSMLFGGVLFFAGALING-F---AQ-GVWMLIVGRLLLGFGIGFANQSVPLYLSEMAPY 164 (336)
Q Consensus 91 ~~~~i~~~~~g~l~dr~Gr-r~~l~~~~~~~~i~~~~~~-~---~~-~~~~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~ 164 (336)
++.+++++.+|+...|.+. |+.++.+.++..+++++.. . .+ ..+.++++|++.|+|.|. ....-.|+++-...
T Consensus 82 lg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~~ 160 (488)
T KOG2325|consen 82 LGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGN-FAVLRAYIADASTV 160 (488)
T ss_pred HHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCccc-HHHHHHHHHhccCc
Confidence 9999999999999999986 7778889999999998873 3 22 567889999999998765 46667899998888
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHhhcccC-C------c---hhHHHHhhhHHHHHHHHHhh-cccCCCh
Q 043735 165 KYRGALNIGFQLSITIGILIANVLNYFFAKIKG-G------W---GWRLSLGGAMVPALIITIGS-LVLPDTP 226 (336)
Q Consensus 165 ~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~-~------~---~w~~~~~~~~~~~~~~~~~~-~~~~e~~ 226 (336)
++|.++.+....+..+|..+||.+...+..... + . .+..+-|+.++..++.++.. ++++|.+
T Consensus 161 ~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~ 233 (488)
T KOG2325|consen 161 EDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVY 233 (488)
T ss_pred cchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecc
Confidence 999999999999899999999988877765432 0 0 12233445555555444443 4566665
No 119
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.42 E-value=7.1e-12 Score=110.01 Aligned_cols=268 Identities=12% Similarity=0.108 Sum_probs=175.6
Q ss_pred CCCchHHHHHHHHHHHHHHHHhhhccccccccchhhHHhhhccchhhhcccCCCCcccccCCCchhHHHHHHHHHHHHHH
Q 043735 17 GKLTPFVTVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKRFFPSVYRKQQANSSTNQYCQYNSETLTLFTSSLYLAALLS 96 (336)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~ 96 (336)
.|..+++|+...+.++..+..+.....++.. ..+.+.| +| +.+..-|+..++.+.+...
T Consensus 37 ~rVy~rRW~vLl~~slL~~SN~~qWI~ya~i---~n~~~~~-----------------Yg-s~~~~~wlsmIym~v~vp~ 95 (480)
T KOG2563|consen 37 HRVYPRRWVVLLAFSLLNFSNGMQWIQYAPI---NNYVNSF-----------------YG-SSSAADWLSMIYMVVSVPF 95 (480)
T ss_pred cccchhHhHHHHHHHHHHhcCcchheeehhH---HHHHHHH-----------------hc-chHHHHHHHHHHHHHHHHH
Confidence 3566678888777777667666655444433 2333333 36 6777889999999999999
Q ss_pred HHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhh------hHH--HHHHHHHHHhhhhhhhhhhHHHHhhhcCCCccch
Q 043735 97 SLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQ------GVW--MLIVGRLLLGFGIGFANQSVPLYLSEMAPYKYRG 168 (336)
Q Consensus 97 ~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~------~~~--~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~r~ 168 (336)
.+++-|+.||+|-|..++++..+.+++..+-..+. .++ ....+..+.+...-........+..-||++++|.
T Consensus 96 gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra 175 (480)
T KOG2563|consen 96 GFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRA 175 (480)
T ss_pred hhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhh
Confidence 99999999999999999999999999997776542 334 5667778888777666666677888999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhccc---CCchhHH--HHhhhHHHHHHHH-HhhcccCCChHHHHhcCChHHHHHHH
Q 043735 169 ALNIGFQLSITIGILIANVLNYFFAKIK---GGWGWRL--SLGGAMVPALIIT-IGSLVLPDTPNSMIERGQRDEAREKL 242 (336)
Q Consensus 169 ~~~~~~~~~~~~g~~~~~~l~~~~~~~~---~~~~w~~--~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~ 242 (336)
.+..+-.++..+|..++.++...+.... .+..|.. .++...+++.+.+ +..+..++.|+... ..++
T Consensus 176 ~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPp-----s~s~--- 247 (480)
T KOG2563|consen 176 IATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPP-----SASQ--- 247 (480)
T ss_pred hhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC-----chhH---
Confidence 9999999999999999988888877654 1234543 3443333333222 22233444332100 0000
Q ss_pred HHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHcHHHHHHhcCCCCcHHHH
Q 043735 243 RKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPVLFNTIGFGNDASLM 322 (336)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~~~~ 322 (336)
....+.+...+.++.++.+ .+....+.+......++...+.+...+.-.|++...+++
T Consensus 248 ------------------~~~~~~~f~~si~~~~~n~----~F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ 305 (480)
T KOG2563|consen 248 ------------------AALQDASFPKSIKSCFKNR----QFIILAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGY 305 (480)
T ss_pred ------------------hhhhcCcHHHHHHHHHcCc----cHHHHHHHHhhhHHHHHHHHHHhhhccccccCCccccch
Confidence 0000111222333444433 455555566666666666666665555566888788888
Q ss_pred HHHHHhHhhheec
Q 043735 323 SAVITGLVNACAT 335 (336)
Q Consensus 323 ~~~~~~~~~~~~~ 335 (336)
.....-+.+++++
T Consensus 306 ig~l~iv~Gmlga 318 (480)
T KOG2563|consen 306 IGALMIVAGMLGA 318 (480)
T ss_pred hHHHHHHHHHHHH
Confidence 7777777666653
No 120
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.42 E-value=4.4e-12 Score=117.18 Aligned_cols=147 Identities=12% Similarity=-0.061 Sum_probs=110.0
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhc-----hhHHHHHHHHHHH-HHHHHHHhhhhHHH-HHHHHHHHhhhh
Q 043735 75 CQYNSETLTLFTSSLYLAALLSSLVASSVTRKFG-----RKKSMLFGGVLFF-AGALINGFAQGVWM-LIVGRLLLGFGI 147 (336)
Q Consensus 75 ~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~G-----rr~~l~~~~~~~~-i~~~~~~~~~~~~~-~~~~r~l~g~~~ 147 (336)
+|+|.++++...++..+...+-.+ +|+++||++ ||+.++++.++.+ ++....+..++... ..+..++.+++.
T Consensus 56 lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~ 134 (468)
T TIGR00788 56 LGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAK 134 (468)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHH
Confidence 499999999999999999999666 999999998 7888888877763 44333343344333 344788999999
Q ss_pred hhhhhhHHHHhhhcCCCccchhHHH---HHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCC
Q 043735 148 GFANQSVPLYLSEMAPYKYRGALNI---GFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPD 224 (336)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e 224 (336)
+........+..|..+ +++....+ .......+|..+++.+++.+.+. .+|+..|++.+...++..+..++++|
T Consensus 135 a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~---~~~~~~f~~~a~l~ll~~~~~~~~~E 210 (468)
T TIGR00788 135 ALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDK---TLTRILFLITAALLLLQLFVSNLSKE 210 (468)
T ss_pred HHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHh---cCcchHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999998 54444332 33333457999999999988873 57999998877776666555567788
Q ss_pred Ch
Q 043735 225 TP 226 (336)
Q Consensus 225 ~~ 226 (336)
++
T Consensus 211 ~~ 212 (468)
T TIGR00788 211 RR 212 (468)
T ss_pred cc
Confidence 63
No 121
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.42 E-value=1.6e-11 Score=110.76 Aligned_cols=138 Identities=12% Similarity=0.041 Sum_probs=120.9
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHH
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVP 155 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~ 155 (336)
|.+..+.+.+.+...++..++.++.+++.||+|+|+.+.++.++..+.....++.++.+.+++.+++.|++.+...+...
T Consensus 236 g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~ 315 (382)
T TIGR00902 236 GISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAM 315 (382)
T ss_pred CCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcCCCccchhHHHHHH-HHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHh
Q 043735 156 LYLSEMAPYKYRGALNIGFQ-LSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIG 218 (336)
Q Consensus 156 ~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 218 (336)
.++.+. |+++|+...++++ ...++|..+++.+++.+.+.. |+ ..|...+.+++...+.
T Consensus 316 ~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~---g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 316 RYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTL---GA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cH-HHHHHHHHHHHHHHHH
Confidence 999998 9999999999876 567899999999999999853 45 4455555555544443
No 122
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.42 E-value=2.1e-11 Score=110.43 Aligned_cols=147 Identities=16% Similarity=0.062 Sum_probs=111.2
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHhhhhhhhhhhH
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQ-GVWMLIVGRLLLGFGIGFANQSV 154 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~-~~~~~~~~r~l~g~~~~~~~~~~ 154 (336)
|.+..+.+...+.+.++..++.++.|++.||+|||+.+..+..+..++..+....+ +...+ ..++.|++.+...+..
T Consensus 236 g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~l~g~g~g~~~~~~ 313 (393)
T PRK09705 236 GASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVL--WAMVCGLGLGGAFPLC 313 (393)
T ss_pred CCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHH--HHHHHHHhccchHHHH
Confidence 88899999999999999999999999999999999999888877777765544323 22222 2345677777777777
Q ss_pred HHHhhhcCC-CccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHh-hcccCCCh
Q 043735 155 PLYLSEMAP-YKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIG-SLVLPDTP 226 (336)
Q Consensus 155 ~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~e~~ 226 (336)
.....+..+ +++|++..+..+....++..++|.+.+++.+..+ +|...+.+..+..++..+. ..+.||++
T Consensus 314 ~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (393)
T PRK09705 314 LLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISG--NYLMDWAFHALCVVGLMIITLRFAPARF 385 (393)
T ss_pred HHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CchHHHHHHHHHHHHHHHHHHHhccccc
Confidence 766677775 5778999999999999999999999999998654 3666666555554444443 35667765
No 123
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.42 E-value=1.3e-11 Score=112.66 Aligned_cols=148 Identities=17% Similarity=0.090 Sum_probs=123.0
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHH
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVP 155 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~ 155 (336)
|.+..+.+++.+...++..++.++.+++.||.++++.+..+.++.+++.+...+.++.+...++.++.|++.+...+...
T Consensus 255 g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 334 (417)
T PRK10489 255 QMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQY 334 (417)
T ss_pred CCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78888999999999999999999999999998888888888888888877777788887778888899998888777878
Q ss_pred HHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHH-HHHhhcccCCCh
Q 043735 156 LYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALI-ITIGSLVLPDTP 226 (336)
Q Consensus 156 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~-~~~~~~~~~e~~ 226 (336)
.++.|..|++.||++.++++....+|..+++.+.+.+.+. .|++..+...++..++ ..+....+++.+
T Consensus 335 ~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (417)
T PRK10489 335 TLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAM---MTPVASASASGFGLLIIGVLLLLVLGELR 403 (417)
T ss_pred HHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHH---hchhhHHHHHHHHHHHHHHHHHHhccccc
Confidence 8999999999999999999999999999999999999884 4566677655555443 344445566654
No 124
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.42 E-value=2.3e-12 Score=120.37 Aligned_cols=132 Identities=13% Similarity=-0.008 Sum_probs=102.7
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHhhhhhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFA--QGVWMLIVGRLLLGFGIGFANQS 153 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~--~~~~~~~~~r~l~g~~~~~~~~~ 153 (336)
|++..+.+++.+...++..++.++.|+++||+|||+++..+.++..+..+..... .+.+.+.+..++.+.......+.
T Consensus 307 g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (496)
T PRK03893 307 GYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGL 386 (496)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchh
Confidence 8899999999999999999999999999999999999888877666655443332 33344444455544433334566
Q ss_pred HHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHH
Q 043735 154 VPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMV 210 (336)
Q Consensus 154 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~ 210 (336)
...++.|.+|+++|++.+++.+....+|..++|.+.+.+.+. +||+..+...+.
T Consensus 387 ~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~---~g~~~~~~~~~~ 440 (496)
T PRK03893 387 LPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQR---LDLGTALASLSF 440 (496)
T ss_pred hHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhcc---CChHHHHHHHHH
Confidence 677889999999999999999999999999999999999874 467776654443
No 125
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.41 E-value=1.6e-11 Score=110.76 Aligned_cols=139 Identities=14% Similarity=0.111 Sum_probs=111.9
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHH
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVP 155 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~ 155 (336)
|.+.++.+++.+...++..+++++.|++.||+|||+++..+..+..++.+... + ........++.|++.....|...
T Consensus 231 g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~g~~~~~~~p~~~ 307 (381)
T PRK03633 231 GMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFILGAAGFTLYPVAM 307 (381)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHHHHHHHhHHHHHH
Confidence 77888889999999999999999999999999999999888887777665443 2 22334566777887777788888
Q ss_pred HHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhc
Q 043735 156 LYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSL 220 (336)
Q Consensus 156 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 220 (336)
..+.|..|+++++...+.++...++|..++|.+++.+.+. .+|++.|.+.+...++..+..+
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~---~g~~~~f~~~~~~~l~~~~~~~ 369 (381)
T PRK03633 308 AWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQN---YSDNLLFIMIASVSFIYLLMLL 369 (381)
T ss_pred HHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCccHHHHHHHHHHHHHHHHHH
Confidence 8899999988888888888888999999999999999884 4688888877666655544433
No 126
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.40 E-value=3.3e-14 Score=132.15 Aligned_cols=255 Identities=16% Similarity=0.195 Sum_probs=3.0
Q ss_pred CCCcccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhh-----------------
Q 043735 69 SSTNQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQ----------------- 131 (336)
Q Consensus 69 ~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~----------------- 131 (336)
+.+++.|+++.++.|++.+.+-++..+..++..++.+|..|-|++-++.++.+++++++++-+
T Consensus 27 ttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~ 106 (539)
T PF03137_consen 27 TTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGN 106 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccccccc
Confidence 445777799999999999999999999999999999998888999999999999987775310
Q ss_pred ---------------------------------hHHHHHHHHHHHhhhhhhhhhhHHHHhhhcCCCccchhHHHHHHHHH
Q 043735 132 ---------------------------------GVWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYKYRGALNIGFQLSI 178 (336)
Q Consensus 132 ---------------------------------~~~~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 178 (336)
-+..++++.++.|+|....+++..+|+=|..++++-+...+++....
T Consensus 107 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~ 186 (539)
T PF03137_consen 107 SSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMS 186 (539)
T ss_dssp ---------------------------------------------SSS--------------------------------
T ss_pred cccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHh
Confidence 02567888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcccC---------------Cc----hhHHHHhhhHHHHHHHHHhhcccCCChHHHHhcCChHHHH
Q 043735 179 TIGILIANVLNYFFAKIKG---------------GW----GWRLSLGGAMVPALIITIGSLVLPDTPNSMIERGQRDEAR 239 (336)
Q Consensus 179 ~~g~~~~~~l~~~~~~~~~---------------~~----~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 239 (336)
.+|.++|-++++...+... +. .|...|++.+...++..+..+++|+.-+...+..+.++.
T Consensus 187 ~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~~~~~~~~~~~- 265 (539)
T PF03137_consen 187 ILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPGTSERQEEKES- 265 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCcccccchhhh-
Confidence 9999999888887764321 01 255556666666666666666666553211000000000
Q ss_pred HHHHHHcCCCcchHHHHHHHHHHHhccccccchhh---hccccchhHHHHHHHHHHHHHhhchhHHHHcHHHHHH-hcCC
Q 043735 240 EKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGN---LLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPVLFN-TIGF 315 (336)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~ 315 (336)
++.+.++..+++.+ +.+..+......++ .+++...++.+....+..........++..|.|.|++ ++|.
T Consensus 266 ---~~~~~~~~~~~~~~----~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~ 338 (539)
T PF03137_consen 266 ---SERKEEDSDKDSFK----DPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGL 338 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---hhcchhhhhhhccc----ccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 00000000000000 00000001122222 2345556667888888888888888899999999995 6899
Q ss_pred CCcHHHHHHHHHhHhh
Q 043735 316 GNDASLMSAVITGLVN 331 (336)
Q Consensus 316 s~~~~~~~~~~~~~~~ 331 (336)
++.+++++..+..+.+
T Consensus 339 sas~A~~l~G~v~ip~ 354 (539)
T PF03137_consen 339 SASQASLLTGIVSIPG 354 (539)
T ss_dssp ----------------
T ss_pred CHHHHHHHHhhhhcch
Confidence 9999888776655533
No 127
>PRK03545 putative arabinose transporter; Provisional
Probab=99.40 E-value=2.2e-11 Score=110.20 Aligned_cols=140 Identities=17% Similarity=0.115 Sum_probs=111.4
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHH-HHHHhhhhHHHHHHHHHHHhhhhhhhhhhH
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGA-LINGFAQGVWMLIVGRLLLGFGIGFANQSV 154 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~-~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~ 154 (336)
|.|..+.+++.+...++..+++++.|++.||+|||++.. +..+..++. ......++.+.+++..++.|++.+...+..
T Consensus 237 g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 315 (390)
T PRK03545 237 GLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAM 315 (390)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHH
Confidence 788889999999999999999999999999999887544 444444443 333455677778888889999877766767
Q ss_pred HHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhc
Q 043735 155 PLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSL 220 (336)
Q Consensus 155 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 220 (336)
...+.|..| ++|+++.+.++....+|..+||++.+.+.+. .|++..++..+.+.++..+...
T Consensus 316 ~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~---~g~~~~~~~~~~~~~~~~~~~~ 377 (390)
T PRK03545 316 QVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLH---LGLSSIGYVGAALALAALVWSI 377 (390)
T ss_pred HHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cChhHHHHHHHHHHHHHHHHHH
Confidence 778888876 5789999999999999999999999999874 5799899887777666555443
No 128
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.39 E-value=2.5e-11 Score=112.82 Aligned_cols=151 Identities=17% Similarity=0.080 Sum_probs=108.5
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhh--h-HH-HHHHHHHHHhhhhhh-h
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQ--G-VW-MLIVGRLLLGFGIGF-A 150 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~--~-~~-~~~~~r~l~g~~~~~-~ 150 (336)
|.+.....+......++..++.++.|+++||+|||++++.+.++.+++.++..... + .+ ......++.+.+.+. .
T Consensus 302 g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (479)
T PRK10077 302 GASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSW 381 (479)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccc
Confidence 77777777777788888999999999999999999999999999888887665431 1 11 222233444444433 2
Q ss_pred hhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhc---ccCCchhHHHHhhhHHHHHHHHHhh-cccCCCh
Q 043735 151 NQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAK---IKGGWGWRLSLGGAMVPALIITIGS-LVLPDTP 226 (336)
Q Consensus 151 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~---~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~e~~ 226 (336)
.+....++.|.+|+++|+.+.++.+....+|..+++.+.+.+.+ ..+..+|++.|++.++..++..+.. ++.||++
T Consensus 382 ~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 461 (479)
T PRK10077 382 GPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETK 461 (479)
T ss_pred cchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhccccCC
Confidence 36678999999999999999999999999999888766655441 1113567777877666655555544 4567764
No 129
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.39 E-value=2.4e-11 Score=109.42 Aligned_cols=221 Identities=17% Similarity=0.177 Sum_probs=131.4
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhc-hhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhH
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFG-RKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSV 154 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~G-rr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~ 154 (336)
|+|.+|+|.+.+...+...++++++|.++||.+ +|+++.+..++.++........++++.+.+..++..+...+..|..
T Consensus 33 G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~~~~~l~~~~~~p~~pl~ 112 (400)
T PF03825_consen 33 GFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSFWWLFVIMLLFSFFFSPTMPLS 112 (400)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHccHHHHH
Confidence 899999999999999999999999999999986 5777777777777777777778888888888888888888888888
Q ss_pred HHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHH-HHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCCChHHHHhcC
Q 043735 155 PLYLSEMAPYKYRGALNIGFQLSITIGILIANVL-NYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPDTPNSMIERG 233 (336)
Q Consensus 155 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l-~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 233 (336)
.++..+...++ +.-.+-.-..+++|-.++... ...+....+..+....+++.+...++.....+.+|+.|+....++
T Consensus 113 dsi~~~~~~~~--~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~l~lp~~~~~~~~~~ 190 (400)
T PF03825_consen 113 DSIALSYLGDR--GKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFALFLPKTPPKRSAKE 190 (400)
T ss_pred HHHHHHHcccc--cCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHhCCCCccccccCC
Confidence 88888877532 233333333444444443322 111221111012223444444444444444566787652100000
Q ss_pred ChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHcHHHHHHhc
Q 043735 234 QRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPVLFNTI 313 (336)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (336)
+.++....+..+++|++. .. .+.+..+...........|.+.++++.
T Consensus 191 -----------------------------~~~~~~~~~~~~llk~~~---~~-~Fll~~~l~~~~~~~~~~f~~~yl~~~ 237 (400)
T PF03825_consen 191 -----------------------------SVKKLLGLDALKLLKNPR---FL-VFLLAAFLIGISHAAYYTFFSIYLQEL 237 (400)
T ss_pred -----------------------------CcccccchHHHHHhcCcc---HH-HHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 000000111223444442 22 233333333334455677888889988
Q ss_pred C-CCCcHHHHHHHHHhHhh
Q 043735 314 G-FGNDASLMSAVITGLVN 331 (336)
Q Consensus 314 G-~s~~~~~~~~~~~~~~~ 331 (336)
| ++....+...++..+..
T Consensus 238 gg~~~~~~g~~~~l~~~aE 256 (400)
T PF03825_consen 238 GGYSGSTIGILWALGVVAE 256 (400)
T ss_pred ccchhhHHHHHHHHHHHHH
Confidence 7 77777776655544433
No 130
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.39 E-value=3.6e-12 Score=118.21 Aligned_cols=151 Identities=11% Similarity=0.077 Sum_probs=105.6
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHhHHhhh----hhch-hHHHHHHHHHHHHHHHHHHhhhh------HHHHHHHHHHH
Q 043735 75 CQYNSETLTLFTSSLYLAALLSSLVASSVTR----KFGR-KKSMLFGGVLFFAGALINGFAQG------VWMLIVGRLLL 143 (336)
Q Consensus 75 ~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~d----r~Gr-r~~l~~~~~~~~i~~~~~~~~~~------~~~~~~~r~l~ 143 (336)
+|++...+|.+..+.-+.-++..++.|.++| |+|| |+.++++.+..+++.+++...++ +..+.+...+.
T Consensus 37 ~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~ 116 (473)
T PRK10429 37 VGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILW 116 (473)
T ss_pred cCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHH
Confidence 3899999999999999999999999999999 6699 56677787777777655543321 23445555667
Q ss_pred hhhhhhhhhhHHHHhhhcC-CCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccC----CchhHHHHhhhHHHHHHHHHh
Q 043735 144 GFGIGFANQSVPLYLSEMA-PYKYRGALNIGFQLSITIGILIANVLNYFFAKIKG----GWGWRLSLGGAMVPALIITIG 218 (336)
Q Consensus 144 g~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~----~~~w~~~~~~~~~~~~~~~~~ 218 (336)
+++.........++..|+. ++++|.+..+.-....++|+.+.+.+...+.+..+ ..+|+...++.+++.++..+.
T Consensus 117 ~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~ 196 (473)
T PRK10429 117 GMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTII 196 (473)
T ss_pred HHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHH
Confidence 7777777888888999998 68999998888667777776665554443322111 235777666666655544433
Q ss_pred h-cccCCC
Q 043735 219 S-LVLPDT 225 (336)
Q Consensus 219 ~-~~~~e~ 225 (336)
. +..+|.
T Consensus 197 ~~~~~~e~ 204 (473)
T PRK10429 197 TLRNVHEV 204 (473)
T ss_pred HHcCceec
Confidence 3 345664
No 131
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.38 E-value=9.3e-12 Score=112.29 Aligned_cols=134 Identities=14% Similarity=0.096 Sum_probs=104.8
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHH--HHHHh--hhhHHHHHHHHHHHhhhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGA--LINGF--AQGVWMLIVGRLLLGFGIGFAN 151 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~--~~~~~--~~~~~~~~~~r~l~g~~~~~~~ 151 (336)
|.+..+.+.+.+...++..++.++.|+++||+|||+.+.....+..+.. +.... .++.+.+.+..++.|++.+...
T Consensus 251 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 330 (394)
T TIGR00883 251 GLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYT 330 (394)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHh
Confidence 7788889999999999999999999999999999998776555444433 12222 2456666777888899888888
Q ss_pred hhHHHHhhhcCCCccchhHHHH-HHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHH
Q 043735 152 QSVPLYLSEMAPYKYRGALNIG-FQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVP 211 (336)
Q Consensus 152 ~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~ 211 (336)
+....++.|.+|+++|+++.++ ++.+..+|..++|.+.+.+.+..+ .|+..++...+.
T Consensus 331 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g--~~~~~~~~~~~~ 389 (394)
T TIGR00883 331 GPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTG--DWYAIGYYLAAL 389 (394)
T ss_pred hhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcC--cchhHHHHHHHH
Confidence 9999999999999999999887 566677888899999999988543 266665544443
No 132
>PRK09669 putative symporter YagG; Provisional
Probab=99.38 E-value=4.6e-12 Score=116.63 Aligned_cols=150 Identities=12% Similarity=0.094 Sum_probs=107.5
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHhHHhhhh----hchh-HHHHHHHHHHHHHHHHHHhhhh------HHHHHHHHHHH
Q 043735 75 CQYNSETLTLFTSSLYLAALLSSLVASSVTRK----FGRK-KSMLFGGVLFFAGALINGFAQG------VWMLIVGRLLL 143 (336)
Q Consensus 75 ~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr----~Grr-~~l~~~~~~~~i~~~~~~~~~~------~~~~~~~r~l~ 143 (336)
+|+|..++|.+.++.-+..++..++.|+++|| +||| +.++++.+..+++.++....++ ...+++..++.
T Consensus 40 ~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~ 119 (444)
T PRK09669 40 FGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILL 119 (444)
T ss_pred cCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHH
Confidence 49999999999999999999999999999998 7874 5566677777777655544432 34555566666
Q ss_pred hhhhhhhhhhHHHHhhhcC-CCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccC----CchhHHHHhhhHHHHHHHHHh
Q 043735 144 GFGIGFANQSVPLYLSEMA-PYKYRGALNIGFQLSITIGILIANVLNYFFAKIKG----GWGWRLSLGGAMVPALIITIG 218 (336)
Q Consensus 144 g~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~----~~~w~~~~~~~~~~~~~~~~~ 218 (336)
+.+.........++.+|+. ++++|.+..+.-..+..+|..+++.+...+....+ ..+|+..+++.+++.++..+.
T Consensus 120 ~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~ 199 (444)
T PRK09669 120 SLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFC 199 (444)
T ss_pred HHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHH
Confidence 7766666777778999987 56889988888888888887777765544433221 247888877777665554443
Q ss_pred h-cccCC
Q 043735 219 S-LVLPD 224 (336)
Q Consensus 219 ~-~~~~e 224 (336)
. +..+|
T Consensus 200 ~~~~~~e 206 (444)
T PRK09669 200 CFFMTKE 206 (444)
T ss_pred HhCCeEE
Confidence 3 34444
No 133
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.38 E-value=2.3e-11 Score=110.51 Aligned_cols=142 Identities=14% Similarity=0.160 Sum_probs=108.1
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHH-HHHHHHHHHHHHHHh-----hhhHHHHHHHHHHHhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSML-FGGVLFFAGALINGF-----AQGVWMLIVGRLLLGFGIGF 149 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~-~~~~~~~i~~~~~~~-----~~~~~~~~~~r~l~g~~~~~ 149 (336)
|++..+.+.+.+...++..++.+..|+++||+|||+.+. .+.+...++.+.... .++.+.+.+..++.|++.+.
T Consensus 253 g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~ 332 (402)
T TIGR00897 253 GFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAG 332 (402)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHH
Confidence 888888899999999999999999999999999988764 333333333333222 23566667778888888776
Q ss_pred hhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhccc
Q 043735 150 ANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVL 222 (336)
Q Consensus 150 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 222 (336)
..+. ...+.|..| ++|+++.++.+....+|..++|.+.+.+.+. .||+..+++.++..++..+..+|+
T Consensus 333 ~~~~-~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~---~g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 333 YVPL-AAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGF---FGAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred HHHH-HHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhh---cchHHHHHHHHHHHHHHHHHHHHh
Confidence 5443 456677655 5899999999999999999999999999884 568888888777766666555554
No 134
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.38 E-value=2.3e-11 Score=113.71 Aligned_cols=142 Identities=18% Similarity=0.101 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhh----HHHHHHHHHHHhhhhhhhhhhHHHHhhhc
Q 043735 86 TSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQG----VWMLIVGRLLLGFGIGFANQSVPLYLSEM 161 (336)
Q Consensus 86 ~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~----~~~~~~~r~l~g~~~~~~~~~~~~~~~~~ 161 (336)
..+..++..++.++.++++||+|||++++.+.++.+++.++.++..+ ...+...-+...++.....+..+.+.+|.
T Consensus 341 ~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~ 420 (502)
T TIGR00887 341 LIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEV 420 (502)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhcc
Confidence 33445566778899999999999999998888887777655554321 11111111111122222345667788999
Q ss_pred CCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccC-------CchhHHHHhhhHHHHHHHHHhhcccCCChH
Q 043735 162 APYKYRGALNIGFQLSITIGILIANVLNYFFAKIKG-------GWGWRLSLGGAMVPALIITIGSLVLPDTPN 227 (336)
Q Consensus 162 ~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~-------~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~ 227 (336)
+|.+.|+++.++.+....+|++++|.+.+.+.+..+ +.++...+++.++..++..+..+++||+++
T Consensus 421 ~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~lpEt~~ 493 (502)
T TIGR00887 421 FPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTLLIPETKG 493 (502)
T ss_pred CchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHheEeccCCC
Confidence 999999999999999999999999999988876321 124455666666666655555577898763
No 135
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.38 E-value=3.7e-11 Score=110.35 Aligned_cols=150 Identities=17% Similarity=0.204 Sum_probs=129.0
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchh--HHHHHHHHHHHHHHHHHHh--------hhhHHHHHHHHHHH
Q 043735 74 YCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRK--KSMLFGGVLFFAGALINGF--------AQGVWMLIVGRLLL 143 (336)
Q Consensus 74 ~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr--~~l~~~~~~~~i~~~~~~~--------~~~~~~~~~~r~l~ 143 (336)
++|++..+...+..+..+...+|++++|++.||+|.| ++++.+++++.+..+...+ .++.+.+.+.-++.
T Consensus 311 ~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~ 390 (477)
T PF11700_consen 311 VLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLI 390 (477)
T ss_pred hcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHH
Confidence 3499999999999999999999999999999999999 8999988888776665555 56778888899999
Q ss_pred hhhhhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccC
Q 043735 144 GFGIGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLP 223 (336)
Q Consensus 144 g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 223 (336)
|++.|..++..-++.+|+.|+++.+...+++.+..-..+.+||++.+.+.+..+ +-|+.+....++.++..++.++++
T Consensus 391 G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg--~~r~g~~~l~~lf~~gl~ll~~v~ 468 (477)
T PF11700_consen 391 GLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATG--SQRYGFLFLLVLFLIGLILLFFVD 468 (477)
T ss_pred HHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CchhHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999999999999999999999999998765 466777666666666666656665
Q ss_pred CC
Q 043735 224 DT 225 (336)
Q Consensus 224 e~ 225 (336)
..
T Consensus 469 ~~ 470 (477)
T PF11700_consen 469 VE 470 (477)
T ss_pred ch
Confidence 43
No 136
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.37 E-value=1.8e-11 Score=113.36 Aligned_cols=148 Identities=16% Similarity=0.045 Sum_probs=111.0
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHh-----hh------hHHHHHHHHHHHh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGF-----AQ------GVWMLIVGRLLLG 144 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~-----~~------~~~~~~~~r~l~g 144 (336)
|++..+.++......++..++.++.|+++||+|||+.+..+.++.+++.++..+ .+ +...+....++.+
T Consensus 315 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (481)
T TIGR00879 315 GVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIA 394 (481)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHH
Confidence 778888899999999999999999999999999999999988888877766652 11 2222222232222
Q ss_pred hhhhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhh-cccC
Q 043735 145 FGIGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGS-LVLP 223 (336)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~ 223 (336)
.......+....++.|.+|+++|+++.++.+....+|.+++|.+.+.+.+. .+|++.|++.++++++..+.. ++.|
T Consensus 395 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~---~~~~~~f~~~~~~~~~~~i~~~~~~~ 471 (481)
T TIGR00879 395 FFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLES---IGVGGVFIFFGGLNVLGLIFVYFFLP 471 (481)
T ss_pred HHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCccceehhHHHHHHHHHHHHheecc
Confidence 222233456667789999999999999999999999999999999988773 468888877777766555544 4566
Q ss_pred CCh
Q 043735 224 DTP 226 (336)
Q Consensus 224 e~~ 226 (336)
|++
T Consensus 472 ~~~ 474 (481)
T TIGR00879 472 ETK 474 (481)
T ss_pred cCC
Confidence 654
No 137
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.37 E-value=2.9e-11 Score=109.98 Aligned_cols=136 Identities=19% Similarity=0.112 Sum_probs=117.0
Q ss_pred hHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHhhhc
Q 043735 82 LTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVPLYLSEM 161 (336)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~~~~~~~ 161 (336)
.+.+.++..++..++.+..|++.||+|||+.+..+.++..++.+...+.++.+.+.+.+++.|++.+...+....++.+.
T Consensus 260 ~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 339 (408)
T PRK09874 260 SGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYN 339 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHh
Confidence 45666677788889999999999999999999999888888777777777888888899999999999999988899999
Q ss_pred CCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhc
Q 043735 162 APYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSL 220 (336)
Q Consensus 162 ~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 220 (336)
.|+++||+..+.++....+|..++|.+++.+.+. .||++.|++.++..++..+..+
T Consensus 340 ~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~---~g~~~~f~~~~~~~l~~~~~~~ 395 (408)
T PRK09874 340 SSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISAN---YGFRAVFLVTAGVVLFNAVYSW 395 (408)
T ss_pred CCcccceeeehHHHHHHHHHHHhhHHHHHHHHhh---cchhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998873 5799999988777766655544
No 138
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.36 E-value=2.4e-11 Score=109.54 Aligned_cols=140 Identities=14% Similarity=0.080 Sum_probs=100.4
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhH--HHHH------HHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKK--SMLF------GGVLFFAGALINGFAQGVWMLIVGRLLLGFGI 147 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~--~l~~------~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~ 147 (336)
|.+..+.+++.+...++..++.++.|+++||+|||+ .... +.++..+........++.+.......+.+.+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (399)
T TIGR00893 247 GLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGL 326 (399)
T ss_pred cccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhch
Confidence 778888999999999999999999999999999996 1111 11111111111111233444444444444444
Q ss_pred hhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCch-hHHHHhhhHHHHHHHHHhh
Q 043735 148 GFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWG-WRLSLGGAMVPALIITIGS 219 (336)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~-w~~~~~~~~~~~~~~~~~~ 219 (336)
+ ..+....++.|.+|+++|++..++.+....+|..++|.+.+.+.+. .| |+..+++.++..++..+..
T Consensus 327 ~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~---~g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 327 G-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAAT---TGSFAGALMVVAALALIGALSY 395 (399)
T ss_pred h-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccC---CCchhHHHHHHHHHHHHHHHHH
Confidence 4 7888899999999999999999999999999999999999999874 34 8888877666655554443
No 139
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.34 E-value=5.9e-12 Score=115.38 Aligned_cols=149 Identities=16% Similarity=0.205 Sum_probs=114.7
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhh----hhchhHH-HHHHHHHHHHHHHHHHhh-h-------hHHHHHHHHHH
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTR----KFGRKKS-MLFGGVLFFAGALINGFA-Q-------GVWMLIVGRLL 142 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~d----r~Grr~~-l~~~~~~~~i~~~~~~~~-~-------~~~~~~~~r~l 142 (336)
|+++...+.+..+.-+..++..++.|.++| |+||||. ++++....+++.+++... + ....+.+..++
T Consensus 33 gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~~~l 112 (428)
T PF13347_consen 33 GLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVFYIL 112 (428)
T ss_pred CCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHHHHH
Confidence 899999999999999999999999999999 8997664 556778888887777655 3 12335666677
Q ss_pred HhhhhhhhhhhHHHHhhhcCC-CccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCC----chhHHHHhhhHHHHHHHHH
Q 043735 143 LGFGIGFANQSVPLYLSEMAP-YKYRGALNIGFQLSITIGILIANVLNYFFAKIKGG----WGWRLSLGGAMVPALIITI 217 (336)
Q Consensus 143 ~g~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~----~~w~~~~~~~~~~~~~~~~ 217 (336)
..++.........++..|+.+ +++|.+..+.-..+..+|..+...+.+.+.+..++ .+|++..++.+++.++..+
T Consensus 113 ~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~ 192 (428)
T PF13347_consen 113 FDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFL 192 (428)
T ss_pred HHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhh
Confidence 788888888888899999997 57899999998888888887777777666654331 2799888877777665555
Q ss_pred hh-cccCC
Q 043735 218 GS-LVLPD 224 (336)
Q Consensus 218 ~~-~~~~e 224 (336)
.. +..+|
T Consensus 193 i~~~~~ke 200 (428)
T PF13347_consen 193 ITFFFVKE 200 (428)
T ss_pred hhhheeee
Confidence 44 45566
No 140
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.31 E-value=4.8e-11 Score=108.24 Aligned_cols=129 Identities=15% Similarity=0.058 Sum_probs=104.9
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHH-HHHhhhhHHHHHHHHHHHhhhhhhhhhhH
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGAL-INGFAQGVWMLIVGRLLLGFGIGFANQSV 154 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~-~~~~~~~~~~~~~~r~l~g~~~~~~~~~~ 154 (336)
|++..+.+++.+...++..++.++.|++.||+|||+.+..+.++..+..+ .....++.+.+.+..++.+++.+...+..
T Consensus 270 g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (405)
T TIGR00891 270 GLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGIL 349 (405)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhH
Confidence 88899999999999999999999999999999999998888776543332 33334556666666677777777777788
Q ss_pred HHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHh
Q 043735 155 PLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLG 206 (336)
Q Consensus 155 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~ 206 (336)
..++.|.+|+++|+++.++.+....+|..++|++.+.+.+..+ .|+..+.
T Consensus 350 ~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g--~~~~~~~ 399 (405)
T TIGR00891 350 PKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLD--EYGTALA 399 (405)
T ss_pred HHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhcc--ccchhHH
Confidence 8899999999999999999999999999999999999988533 1554443
No 141
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.31 E-value=2.9e-10 Score=98.04 Aligned_cols=149 Identities=15% Similarity=0.220 Sum_probs=102.6
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHH
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVP 155 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~ 155 (336)
|+++.|++.+....+...++...+.|.++||+|||+.-+..+++.+++++ +-..++++.++++|++.|++....+++-.
T Consensus 65 g~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GRvlgGiaTSLLfS~FE 143 (354)
T PF05631_consen 65 GFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGRVLGGIATSLLFSAFE 143 (354)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHhccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999986 44568899999999999999988887766
Q ss_pred H-HhhhcC----CCccchhHHHHHH-HHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhh-cccCCCh
Q 043735 156 L-YLSEMA----PYKYRGALNIGFQ-LSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGS-LVLPDTP 226 (336)
Q Consensus 156 ~-~~~~~~----~~~~r~~~~~~~~-~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~e~~ 226 (336)
+ ++.|.- |++..+...+... ....+-.+.+.+++.++.+..+ .|-..+|.......+++.+.. ...+|..
T Consensus 144 sW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~-~g~vaPF~~a~~~l~~~~~~I~~~W~ENy 220 (354)
T PF05631_consen 144 SWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFG-FGPVAPFDAAIVLLAVAAVLILKTWPENY 220 (354)
T ss_pred HHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhC-CCCcchHHHHHHHHHHHHHHHHhcccccC
Confidence 6 444542 2222233222222 2223334444555555554332 233566766555544444443 3445543
No 142
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.30 E-value=1.8e-10 Score=105.53 Aligned_cols=120 Identities=14% Similarity=0.125 Sum_probs=91.2
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhh--hhhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGF--GIGFANQS 153 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~--~~~~~~~~ 153 (336)
|.+..+.+.+.+...++..++.++.|++.||+|||+.+..+.++..+..+.....++.....+...+.|+ +.....+.
T Consensus 262 g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (426)
T PRK12307 262 GFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGL 341 (426)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHH
Confidence 7788888999999999999999999999999999999988887776665544433221112222233333 22233455
Q ss_pred HHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 043735 154 VPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKI 195 (336)
Q Consensus 154 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~ 195 (336)
.+.++.|.+|+++|+++.++......+|+.++|.+.+.+.+.
T Consensus 342 ~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~ 383 (426)
T PRK12307 342 VPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGIT 383 (426)
T ss_pred HHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHc
Confidence 667889999999999999999999999999999999998874
No 143
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.29 E-value=3.7e-10 Score=101.95 Aligned_cols=134 Identities=18% Similarity=0.114 Sum_probs=111.3
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHH
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVP 155 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~ 155 (336)
|.+..+.+.+.+...++..+..++.|++.||+|+|+.+..+.++.+++.+.....++.+.+++..++.|++.+...+...
T Consensus 236 g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 315 (382)
T PRK11128 236 GYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAM 315 (382)
T ss_pred CCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888899999999999999999999999999999999999999888888888888999889999999999998888888
Q ss_pred HHhhhcCCCccchhHHHHHH-HHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHH
Q 043735 156 LYLSEMAPYKYRGALNIGFQ-LSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALI 214 (336)
Q Consensus 156 ~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~ 214 (336)
.++.+. +++++++..+.++ ....+|..++|.+++.+.+.. |+ ..++..+++.+.
T Consensus 316 ~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~---g~-~~~~~~~~~~~~ 370 (382)
T PRK11128 316 RYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHL---GA-GVFWVMALVALP 370 (382)
T ss_pred HHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cH-HHHHHHHHHHHH
Confidence 888886 5566788888775 556778899999999998853 45 344444444443
No 144
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.29 E-value=7.8e-11 Score=109.35 Aligned_cols=143 Identities=13% Similarity=0.039 Sum_probs=100.2
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchh-------HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRK-------KSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIG 148 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr-------~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~ 148 (336)
|++..+.+.+.++..++..++.+++|+++||+||| ..+....++.+++.++....++.+...+..++.+++.+
T Consensus 284 g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~ 363 (476)
T PLN00028 284 GLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQ 363 (476)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHH
Confidence 88889999999999999999999999999999876 22333333333333444445555555555666677666
Q ss_pred hhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccC
Q 043735 149 FANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLP 223 (336)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 223 (336)
...+....++.+..| ++||...++.+.+..+|+.++|.+.. ..+..+|+..|.+.+++.+++.++.++++
T Consensus 364 ~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~----~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 364 AACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF----TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred HhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHH----hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 666666666777654 68999999988887778777776543 11224688888887777776666666554
No 145
>TIGR00898 2A0119 cation transport protein.
Probab=99.29 E-value=1.6e-10 Score=108.26 Aligned_cols=138 Identities=25% Similarity=0.157 Sum_probs=109.5
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhH--HHHHHHHHHHhhhhhhhhhhHHHHhhhc
Q 043735 84 LFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGV--WMLIVGRLLLGFGIGFANQSVPLYLSEM 161 (336)
Q Consensus 84 ~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~--~~~~~~r~l~g~~~~~~~~~~~~~~~~~ 161 (336)
+...+..+...++.++.+++.||+|||+.+.++.++.+++.++..+.++. +...+..++.+++.+..++....+..|.
T Consensus 359 ~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 438 (505)
T TIGR00898 359 LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAEL 438 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 33445566778889999999999999999999999988888777766543 4455556677777777788888999999
Q ss_pred CCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCCCh
Q 043735 162 APYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPDTP 226 (336)
Q Consensus 162 ~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~ 226 (336)
+|++.|+.++++.+....+|++++|.+.+ +.+ .++...+.+.++..++..+..+++||+.
T Consensus 439 ~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~lpet~ 498 (505)
T TIGR00898 439 YPTVVRNLGVGVCSTMARVGSIISPFLVY-LGE----KWLFLPLVLFGGLALLAGILTLFLPETK 498 (505)
T ss_pred ccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHH----HHHhhHHHHHHHHHHHHHHHHHcCcCCC
Confidence 99999999999999999999999999888 433 3455666666666666666667888875
No 146
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.28 E-value=1.8e-10 Score=105.74 Aligned_cols=146 Identities=14% Similarity=0.012 Sum_probs=92.7
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHH--h--hhhHHHHHHHHHHHhhhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALING--F--AQGVWMLIVGRLLLGFGIGFAN 151 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~--~--~~~~~~~~~~r~l~g~~~~~~~ 151 (336)
|.+..+.+...++..++..+++++.|+++||+|||+++....++.++...... . .++....+..-.+.+++.+...
T Consensus 275 g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (432)
T PRK10406 275 GMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYT 354 (432)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHH
Confidence 77888888888888888899999999999999999988776655443332221 1 1222222222222333334444
Q ss_pred hhHHHHhhhcCCCccchhHHHHHHHHHH-HHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCC
Q 043735 152 QSVPLYLSEMAPYKYRGALNIGFQLSIT-IGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPD 224 (336)
Q Consensus 152 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~-~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e 224 (336)
+....++.|++|++.|+.+.++.+...+ +++...|.+.+.+... + .|...+++.++..++..+..+++++
T Consensus 355 ~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~-g--~~~~~~~~~~~~~~i~~~~~~~l~~ 425 (432)
T PRK10406 355 SISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSI-G--METAFFWYVTLMAVVAFLVSLMLHR 425 (432)
T ss_pred HHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHHh-C--CCcHHHHHHHHHHHHHHHHHHHhhh
Confidence 5567889999999999999998776544 3344577777755432 2 2545555555555555555444433
No 147
>PRK10504 putative transporter; Provisional
Probab=99.28 E-value=2e-10 Score=106.63 Aligned_cols=120 Identities=11% Similarity=0.095 Sum_probs=101.9
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHhhhhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFA---QGVWMLIVGRLLLGFGIGFANQ 152 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~---~~~~~~~~~r~l~g~~~~~~~~ 152 (336)
|.+..+.+++.....++..++.++.|++.||+|||+++..+.++..+...+..+. ++.+.+.+..++.|++.+..++
T Consensus 293 g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 372 (471)
T PRK10504 293 GFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFS 372 (471)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHH
Confidence 7788889999988889999999999999999999999998888888777665543 2334445566778888888888
Q ss_pred hHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 043735 153 SVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKI 195 (336)
Q Consensus 153 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~ 195 (336)
....++.+..|++.|+.+.++.+....+|..+++.+.+.+.+.
T Consensus 373 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~ 415 (471)
T PRK10504 373 SMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGL 415 (471)
T ss_pred HHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8889999999999999999999999999999999999888664
No 148
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.27 E-value=6.6e-11 Score=105.64 Aligned_cols=143 Identities=23% Similarity=0.366 Sum_probs=123.7
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhh-chhHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHhhhhhhhh
Q 043735 75 CQYNSETLTLFTSSLYLAALLSSLVASSVTRKF-GRKKSMLFGGVLFFAGALINGFAQ--GVWMLIVGRLLLGFGIGFAN 151 (336)
Q Consensus 75 ~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-Grr~~l~~~~~~~~i~~~~~~~~~--~~~~~~~~r~l~g~~~~~~~ 151 (336)
+|+|++++.-+.+++...--+..+++||++||+ |+|+.+..+.++..++.++.+.+. ....+.++-.+.++|.|..=
T Consensus 56 Lg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K 135 (498)
T COG3104 56 LGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFK 135 (498)
T ss_pred CCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhcccccc
Confidence 689999999999999888889999999999997 999999999999999999998874 67888899999999999999
Q ss_pred hhHHHHhhhcCCCcc--chhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhc
Q 043735 152 QSVPLYLSEMAPYKY--RGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSL 220 (336)
Q Consensus 152 ~~~~~~~~~~~~~~~--r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 220 (336)
+...+++.|.+|+++ |-...++++++.++|+.++|++.+++.+. .||...|...++-.....+..+
T Consensus 136 ~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~---~g~~~gF~~aavGm~~gl~~f~ 203 (498)
T COG3104 136 PNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAIN---YGWHVGFGLAAVGMIIGLVIFL 203 (498)
T ss_pred ccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHh---hCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998754 56788899999999999999999999884 5799888766655444444333
No 149
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.27 E-value=3.5e-10 Score=104.44 Aligned_cols=142 Identities=15% Similarity=0.111 Sum_probs=96.2
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhh--chhHHHH-HHHHHHHHHHHHHHh--hhhHHHHHHHHHHHhhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKF--GRKKSML-FGGVLFFAGALINGF--AQGVWMLIVGRLLLGFGIGFA 150 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~--Grr~~l~-~~~~~~~i~~~~~~~--~~~~~~~~~~r~l~g~~~~~~ 150 (336)
|++..+.+++.....++..++.++.|+++||+ |||+... ....+..++.+.... ..+.+...+..++.|.+....
T Consensus 285 g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 364 (452)
T PRK11273 285 HFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGP 364 (452)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhH
Confidence 77888889998999999999999999999999 5554332 222222333222222 223444444455555543333
Q ss_pred hhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHH-HHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhc
Q 043735 151 NQSVPLYLSEMAPYKYRGALNIGFQLSITIGILI-ANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSL 220 (336)
Q Consensus 151 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 220 (336)
......+..|.+|+++||++.++.+....+|+.+ +|.+.+.+.+. .||+..|++.+..+++.++...
T Consensus 365 ~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~---~g~~~~f~~~~~~~~~~~~~~~ 432 (452)
T PRK11273 365 VMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF---FGWDGGFMVMIGGSILAVILLI 432 (452)
T ss_pred HHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHH---hcchHHHHHHHHHHHHHHHHHH
Confidence 3334456789999999999999998888887654 78999988874 4688888876666665555443
No 150
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.27 E-value=2.8e-10 Score=101.58 Aligned_cols=119 Identities=18% Similarity=0.118 Sum_probs=108.9
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHhhhhhhhhhhH
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQG-VWMLIVGRLLLGFGIGFANQSV 154 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~-~~~~~~~r~l~g~~~~~~~~~~ 154 (336)
|.+..+.+.+.+...++..++.++.+++.||+|||+.+..+.++.+++.+...+.++ .+.+.+..++.|++.+...+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 322 (365)
T TIGR00900 243 GRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQ 322 (365)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 788889999999999999999999999999999999999888888888777777664 7888888999999999999999
Q ss_pred HHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 043735 155 PLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAK 194 (336)
Q Consensus 155 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~ 194 (336)
..++.|..|+++|++..++++....+|..++|.+.+.+.+
T Consensus 323 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~ 362 (365)
T TIGR00900 323 GTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLAD 362 (365)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998876
No 151
>PRK11462 putative transporter; Provisional
Probab=99.25 E-value=8.9e-10 Score=101.77 Aligned_cols=150 Identities=13% Similarity=0.061 Sum_probs=109.0
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHhHHhhhh----hchhH-HHHHHHHHHHHHHHHHHhhhh------HHHHHHHHHHH
Q 043735 75 CQYNSETLTLFTSSLYLAALLSSLVASSVTRK----FGRKK-SMLFGGVLFFAGALINGFAQG------VWMLIVGRLLL 143 (336)
Q Consensus 75 ~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr----~Grr~-~l~~~~~~~~i~~~~~~~~~~------~~~~~~~r~l~ 143 (336)
+|++...+|.+..+.-+.-++..++.|.++|| +|||| .++++.+..+++.+++...++ ...+.+..++.
T Consensus 40 ~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~ 119 (460)
T PRK11462 40 FGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLL 119 (460)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHH
Confidence 39999999999999999999999999999996 68865 555676777777766554432 33455556667
Q ss_pred hhhhhhhhhhHHHHhhhcCC-CccchhHHHHHHHHHHHHHHHHHHHHHHhhcccC----CchhHHHHhhhHHHHHHHHHh
Q 043735 144 GFGIGFANQSVPLYLSEMAP-YKYRGALNIGFQLSITIGILIANVLNYFFAKIKG----GWGWRLSLGGAMVPALIITIG 218 (336)
Q Consensus 144 g~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~----~~~w~~~~~~~~~~~~~~~~~ 218 (336)
.++.........++.+|+.+ +++|.+..+.-..+..+|..+++.+...+....+ ..+|+....+.+++.+++.+.
T Consensus 120 ~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i 199 (460)
T PRK11462 120 TLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAF 199 (460)
T ss_pred HHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHH
Confidence 77888777788889999876 7889999999999999988888777655444322 136777766666665544443
Q ss_pred hc-ccCC
Q 043735 219 SL-VLPD 224 (336)
Q Consensus 219 ~~-~~~e 224 (336)
.+ ..+|
T Consensus 200 ~~~~~kE 206 (460)
T PRK11462 200 CFFTTKE 206 (460)
T ss_pred HHhccee
Confidence 33 3444
No 152
>PRK15075 citrate-proton symporter; Provisional
Probab=99.25 E-value=4.1e-10 Score=103.45 Aligned_cols=122 Identities=17% Similarity=0.152 Sum_probs=90.6
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHH-HH---hhhhHHHHHHHHHHHhhhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALI-NG---FAQGVWMLIVGRLLLGFGIGFAN 151 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~-~~---~~~~~~~~~~~r~l~g~~~~~~~ 151 (336)
|++..+.+++.....++..++.+++|+++||+|||+++..+.++..+.... .. ..+++..+.+..++.+++.+...
T Consensus 270 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 349 (434)
T PRK15075 270 HLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYN 349 (434)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHH
Confidence 788888888888999999999999999999999999888765554332221 11 12334444444566677777767
Q ss_pred hhHHHHhhhcCCCccchhHHHHH-HHHHHHHHHHHHHHHHHhhcccC
Q 043735 152 QSVPLYLSEMAPYKYRGALNIGF-QLSITIGILIANVLNYFFAKIKG 197 (336)
Q Consensus 152 ~~~~~~~~~~~~~~~r~~~~~~~-~~~~~~g~~~~~~l~~~~~~~~~ 197 (336)
+....++.|.+|+++|+...++. +.+..+++.++|.+.+.+.+..+
T Consensus 350 ~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g 396 (434)
T PRK15075 350 GAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTG 396 (434)
T ss_pred hhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcC
Confidence 77778899999999999999985 44444567789999998887543
No 153
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.25 E-value=6.1e-10 Score=97.33 Aligned_cols=126 Identities=13% Similarity=0.089 Sum_probs=101.1
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhH
Q 043735 75 CQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSV 154 (336)
Q Consensus 75 ~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~ 154 (336)
+|++.++.+...+.+..+..+|.+..+++.||+|+|+++.++.++..++.++....++... ...-++.|++.+..+|..
T Consensus 173 ~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~-~~~~~l~g~~~s~i~P~~ 251 (310)
T TIGR01272 173 LGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVA-MWFVLALGLFNSIMFPTI 251 (310)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHHHHHHHHH
Confidence 4889999999999999999999999999999999999998888888777765555444333 345668899999999999
Q ss_pred HHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHh
Q 043735 155 PLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLG 206 (336)
Q Consensus 155 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~ 206 (336)
.+...+..|++ .+.+.++. ....+|+.+.|++.+.+.+. .|.+..++
T Consensus 252 ~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~---~g~~~a~~ 298 (310)
T TIGR01272 252 FSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADC---LGIQLAFA 298 (310)
T ss_pred HHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHh---ccchHHHH
Confidence 99998888764 45556665 56678999999999998874 35666665
No 154
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.23 E-value=9.6e-10 Score=102.39 Aligned_cols=146 Identities=10% Similarity=0.132 Sum_probs=112.4
Q ss_pred cCCCchhHHHH-HHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHH---Hhh-hhHHHHHHHHHHHhhhhhhh
Q 043735 76 QYNSETLTLFT-SSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALIN---GFA-QGVWMLIVGRLLLGFGIGFA 150 (336)
Q Consensus 76 ~~s~~~~~~~~-~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~---~~~-~~~~~~~~~r~l~g~~~~~~ 150 (336)
|+|.++.+++. ....++..++.+++|+++||+|||+.+..+.++..+..+.. ... ++.+.+.+..++..++.|..
T Consensus 254 G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~ 333 (491)
T PRK11010 254 GFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMG 333 (491)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHH
Confidence 88999999987 46678999999999999999999988777666555544322 222 34444555566666666666
Q ss_pred hhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCC
Q 043735 151 NQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPD 224 (336)
Q Consensus 151 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e 224 (336)
.+...++..+..+++.+++..++.+....+|..+++.+.+.+.+. .||+..|.+..+.++...+....+++
T Consensus 334 ~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~---~G~~~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 334 TAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEA---HGWPTFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 677788889999999999999999999999999888889988884 57998888877777776666555544
No 155
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.23 E-value=7.1e-10 Score=100.59 Aligned_cols=140 Identities=15% Similarity=0.199 Sum_probs=116.5
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHH
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVP 155 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~ 155 (336)
+.+....+.+.+...+...++.+..|++.||+|||+.+.++.++.++...+....++.+.+++.+++.|++.+.......
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 329 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCF 329 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556778888999999999999999999999999999999988888887777788888888889999998877766777
Q ss_pred HHhhhcCCCccchhHHHH-HHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHh
Q 043735 156 LYLSEMAPYKYRGALNIG-FQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIG 218 (336)
Q Consensus 156 ~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 218 (336)
.+..+..+++.|+...+. ++....+|..+++.+.+++.+. .||+..|.+.++..++..+.
T Consensus 330 ~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~---~G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 330 KYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDS---IGFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred HHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHh---cccHHHHHHHHHHHHHHHHH
Confidence 788888888888876665 6788999999999999999884 46898988877776555443
No 156
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.23 E-value=5.6e-10 Score=102.53 Aligned_cols=142 Identities=18% Similarity=0.093 Sum_probs=97.2
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhh--chhHHH-HHHHHHHH--HHHHHHHhhhhHHHHHHHHHHHhhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKF--GRKKSM-LFGGVLFF--AGALINGFAQGVWMLIVGRLLLGFGIGFA 150 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~--Grr~~l-~~~~~~~~--i~~~~~~~~~~~~~~~~~r~l~g~~~~~~ 150 (336)
|++..+.+...+...++..++.++.|+++||+ ++|+.. ....+... ...+......+.....+..+..|++....
T Consensus 275 g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 354 (434)
T PRK11663 275 GVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFASYVMQAACFFTIGFFVFGP 354 (434)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHhhH
Confidence 88999999999999999999999999999999 333322 22111111 11111111223333333444445433322
Q ss_pred hhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhc
Q 043735 151 NQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSL 220 (336)
Q Consensus 151 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 220 (336)
.......+.|.+|+++|+++.++.+....+|..++|.+.+.+.+. .||+..|+..+++.++..+..+
T Consensus 355 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~---~g~~~~f~~~~~~~~~~~~~~~ 421 (434)
T PRK11663 355 QMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEI---WHWTGFFVVISIAAGISALLLL 421 (434)
T ss_pred HHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHh---cccHHHHHHHHHHHHHHHHHHH
Confidence 333345678999999999999999999999999999999999874 5699998877777666555443
No 157
>TIGR00895 2A0115 benzoate transport.
Probab=99.22 E-value=1.6e-10 Score=104.34 Aligned_cols=117 Identities=10% Similarity=0.071 Sum_probs=97.4
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHH
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVP 155 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~ 155 (336)
|.+..+.++..+...++..++.++.|++.||+|||+.+....+....+.......++.+...+..++.|++.+...+...
T Consensus 281 g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 360 (398)
T TIGR00895 281 GFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLY 360 (398)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78888899999999999999999999999999999554444433333333333355667777888999999999999999
Q ss_pred HHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHh
Q 043735 156 LYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFF 192 (336)
Q Consensus 156 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~ 192 (336)
.++.|.+|+++|+++.++......+|..++|.+.+.+
T Consensus 361 ~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 361 ALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 9999999999999999999999999999999988764
No 158
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.22 E-value=2.7e-10 Score=99.73 Aligned_cols=150 Identities=23% Similarity=0.255 Sum_probs=130.7
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhh
Q 043735 74 YCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQS 153 (336)
Q Consensus 74 ~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~ 153 (336)
++|++..+...+.....+..++|++++|+|.||+|.|+++..++++..+.++...+...-..+.++-.+.|.+.|+.+..
T Consensus 282 ~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~ 361 (438)
T COG2270 282 DLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQAS 361 (438)
T ss_pred HcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHH
Confidence 45999999999999999999999999999999999999999999999999988777766666777788999999999999
Q ss_pred HHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCCC
Q 043735 154 VPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPDT 225 (336)
Q Consensus 154 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~ 225 (336)
.-++.++..|+++-++..+++++....++.++|.+.+.+.+..+ .-|..+....++.++..+..+.+|+.
T Consensus 362 SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg--~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 362 SRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITG--SSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhc--chhhHHHHHHHHHHhhHhhEEeecCC
Confidence 99999999999999999999999999999999999999998766 46666665555555555666666654
No 159
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.22 E-value=3.8e-10 Score=104.85 Aligned_cols=139 Identities=20% Similarity=0.305 Sum_probs=123.7
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHH
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVP 155 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~ 155 (336)
|.+....|++.++..+|..+|++..+++.+|+++++++..+.++.+++.+..++.++.+...+..++.|++.....+...
T Consensus 250 ~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~~ 329 (524)
T PF05977_consen 250 GGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGAAWIIANSSLN 329 (524)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999988888888
Q ss_pred HHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHH
Q 043735 156 LYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITI 217 (336)
Q Consensus 156 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 217 (336)
+.+.+..|++.||++++++.+....+..+|..+.|.+.+. .|.+..+.+.++..++..+
T Consensus 330 t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~---~g~~~al~~a~~~lll~~~ 388 (524)
T PF05977_consen 330 TLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADH---FGVRTALLIAGAALLLSAL 388 (524)
T ss_pred HHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999884 4577777665554443333
No 160
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.20 E-value=8.9e-10 Score=98.39 Aligned_cols=121 Identities=18% Similarity=0.082 Sum_probs=96.5
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhh-chhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhH
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKF-GRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSV 154 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~ 154 (336)
|.|..+.+.+.+...++..+++++.|++.||+ +||+.+..+.++.+++.+...+.++..... ...+.|++.+..++..
T Consensus 228 g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~~~g~~~~~~ 306 (355)
T TIGR00896 228 GASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVLGLGQGGAFPLA 306 (355)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHHHHhhhhHhHHH
Confidence 78889999999999999999999999999999 567777777777777776666655433222 4567899998888887
Q ss_pred HHHhhhcCC-CccchhHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 043735 155 PLYLSEMAP-YKYRGALNIGFQLSITIGILIANVLNYFFAKIKG 197 (336)
Q Consensus 155 ~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~ 197 (336)
...+.+..+ +++++...++.+....++..++|.+.+.+.+..+
T Consensus 307 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 307 LTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 777665554 4566888888888888999999999999988654
No 161
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.17 E-value=2.2e-09 Score=94.73 Aligned_cols=142 Identities=13% Similarity=0.173 Sum_probs=115.7
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHhhhhhhhhhh
Q 043735 75 CQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFA-QGVWMLIVGRLLLGFGIGFANQS 153 (336)
Q Consensus 75 ~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~-~~~~~~~~~r~l~g~~~~~~~~~ 153 (336)
.|+|.+.++++...+.++..+|+++.|+++|| +.|+.+.....+..+..+...+. ++.+...+.-++.|+..+.....
T Consensus 242 ~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~ 320 (394)
T COG2814 242 AGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQG 320 (394)
T ss_pred cCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhH
Confidence 38899999999999999999999999999999 99999988888888877666554 45556666667777776666666
Q ss_pred HHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcc
Q 043735 154 VPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLV 221 (336)
Q Consensus 154 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ 221 (336)
...-.++ ..++.+..+.+++....++|..+|..+++.+.+. +|+....+..++..+.+.+..+.
T Consensus 321 ~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~---~g~~~~~~~~a~l~~~a~~~~~~ 384 (394)
T COG2814 321 LQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDA---LGYAATGWVGAALLLLALLLALL 384 (394)
T ss_pred HHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hchHHHHHHHHHHHHHHHHHHHH
Confidence 5666666 4457789999999999999999999999999984 67888888888877766665543
No 162
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.16 E-value=2.8e-10 Score=103.74 Aligned_cols=134 Identities=11% Similarity=0.054 Sum_probs=91.2
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHH-HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhH
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKS-MLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSV 154 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~-l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~ 154 (336)
|.+..+.+.+.+...++..++.+..|+++||++||+. .....++..++..+....++.....+.-.+.+++.....+..
T Consensus 275 ~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 354 (412)
T TIGR02332 275 GSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIF 354 (412)
T ss_pred CCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHH
Confidence 5567788999999999999999999999999997774 333333333333222222222222222223333333333444
Q ss_pred HHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHH
Q 043735 155 PLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVP 211 (336)
Q Consensus 155 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~ 211 (336)
.....|.+|+++|+.+.++.+....+|+.++|.+.+.+.+..+ +|++.+++.++.
T Consensus 355 ~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g--~~~~~~~~~~~~ 409 (412)
T TIGR02332 355 WTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATG--SFNSGLWFVAAL 409 (412)
T ss_pred HhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCC--CCchhHHHHHHH
Confidence 4556788999999999999999999999999999998887543 477777655443
No 163
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.16 E-value=5.4e-09 Score=94.64 Aligned_cols=139 Identities=16% Similarity=0.107 Sum_probs=103.4
Q ss_pred cCCCchhHHHHHHHH-HHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHh------hhhHHHHHHHHHHHhhhhh
Q 043735 76 QYNSETLTLFTSSLY-LAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGF------AQGVWMLIVGRLLLGFGIG 148 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~-~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~------~~~~~~~~~~r~l~g~~~~ 148 (336)
|++.++.+++..... ....++.++.|++.||+|+|+.+..+.++.++..+.... .++...+.....+.+++.+
T Consensus 239 G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 318 (390)
T TIGR02718 239 GWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITG 318 (390)
T ss_pred CCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHH
Confidence 889999999888776 466778899999999999999998877665333322221 1223334444556666677
Q ss_pred hhhhhHHHHhhhcCCC-ccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHH
Q 043735 149 FANQSVPLYLSEMAPY-KYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITI 217 (336)
Q Consensus 149 ~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 217 (336)
...+.....+.+..++ +.+++..+..+...++|..++|.+++.+.+. .|++..|...++..++..+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~---~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 319 ITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDR---FGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HccHHHHHHHHHHHHHHHH
Confidence 7777777777777766 7889999999999999999999999999874 4688888776665555443
No 164
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.16 E-value=3.4e-09 Score=97.39 Aligned_cols=119 Identities=24% Similarity=0.296 Sum_probs=99.9
Q ss_pred CCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHhhhhhhhhhhHHH
Q 043735 78 NSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFA-QGVWMLIVGRLLLGFGIGFANQSVPL 156 (336)
Q Consensus 78 s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~-~~~~~~~~~r~l~g~~~~~~~~~~~~ 156 (336)
+..+.+++.+...++..++.+++++++||+|||+++..+.++.+++.+...+. ++.+.+.+..++.|++.+...+...+
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 334 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWA 334 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566778888899999999999999999999999999988888887666554 35666777788899999988899899
Q ss_pred HhhhcCC-------CccchhHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 043735 157 YLSEMAP-------YKYRGALNIGFQLSITIGILIANVLNYFFAKIK 196 (336)
Q Consensus 157 ~~~~~~~-------~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 196 (336)
+++|..+ ++.+|...++++....+|..+++.+.+.+.+..
T Consensus 335 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~ 381 (437)
T TIGR00792 335 LVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGII 381 (437)
T ss_pred HHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9998875 455699999999999999999999999887643
No 165
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.15 E-value=4.6e-09 Score=95.22 Aligned_cols=135 Identities=10% Similarity=0.031 Sum_probs=103.2
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHH
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVP 155 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~ 155 (336)
|++..+.+.+.....++..++.++.+++.||.+|+..+....+......++....++.+.+.+..++.|++.+...+...
T Consensus 248 g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~~~~~~~~ 327 (394)
T PRK10213 248 GFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWS 327 (394)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhHHHH
Confidence 88888999999999999999999999999996544434433333333344444556777778888999999988888888
Q ss_pred HHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHH
Q 043735 156 LYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALI 214 (336)
Q Consensus 156 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~ 214 (336)
..+.+..| +++++..+.......+|..+|+.+++.+.+. .|++..++..++..++
T Consensus 328 ~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~---~g~~~~~~~~~~~~~~ 382 (394)
T PRK10213 328 TWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDN---IGLTSPLMLSGTLMLL 382 (394)
T ss_pred HHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cChhhHHHHHHHHHHH
Confidence 88888887 4566777777888899999999999999884 4577777665554433
No 166
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.14 E-value=9.4e-09 Score=93.44 Aligned_cols=147 Identities=18% Similarity=0.177 Sum_probs=113.6
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhh----hH--H---HHHHHHHHHhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQ----GV--W---MLIVGRLLLGFG 146 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~----~~--~---~~~~~r~l~g~~ 146 (336)
|++..++.+.+....+...+..+++..+.||+|||+.++.+..++.+..+++...- .. | ..+++.++..++
T Consensus 301 G~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~ 380 (485)
T KOG0569|consen 301 GFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIIS 380 (485)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Confidence 88999999999999999999999999999999999999999999999887665431 11 1 223444555544
Q ss_pred hhhh-hhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHH-HhhcccCC
Q 043735 147 IGFA-NQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIIT-IGSLVLPD 224 (336)
Q Consensus 147 ~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~-~~~~~~~e 224 (336)
.+.. -|..+-+.+|++|++.|..+.+.......+..++....-..+.+..+ - +.|++..++.++.. ..++.+||
T Consensus 381 f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g---~-~~filF~i~~~~~~i~~~~~lPE 456 (485)
T KOG0569|consen 381 FAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIG---P-YVFILFVIPLAIFLIYLYRYLPE 456 (485)
T ss_pred hhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---c-hhhHHHHHHHHHHHHHHHHhCcc
Confidence 4433 57778899999999999999999999988888888877777777544 2 45666666655444 44568999
Q ss_pred Ch
Q 043735 225 TP 226 (336)
Q Consensus 225 ~~ 226 (336)
++
T Consensus 457 Tk 458 (485)
T KOG0569|consen 457 TK 458 (485)
T ss_pred cC
Confidence 86
No 167
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.14 E-value=1.3e-09 Score=100.93 Aligned_cols=146 Identities=18% Similarity=0.095 Sum_probs=97.6
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHH--------HHHHHHH--HHHHHHHHh-hhhHHHHHHHHHHHh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSM--------LFGGVLF--FAGALINGF-AQGVWMLIVGRLLLG 144 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l--------~~~~~~~--~i~~~~~~~-~~~~~~~~~~r~l~g 144 (336)
|.+..+.+++.++..++..++.++.|+++||+++|+.. ..+.... .+..+.... ..+....++.-.+.+
T Consensus 293 g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 372 (465)
T TIGR00894 293 RVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLAN 372 (465)
T ss_pred CcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHH
Confidence 88899999999999999999999999999998755321 1111111 111111111 223333444445555
Q ss_pred hhhhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhccc
Q 043735 145 FGIGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVL 222 (336)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 222 (336)
.+.+...+.......|..|+ .+|.+.++.+....+|+.++|.+.+.+.+..+..+|...|.+.++..++..+...+.
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~ 449 (465)
T TIGR00894 373 AVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLIF 449 (465)
T ss_pred HHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeeee
Confidence 55554555555555676665 789999999999999999999999887764322358888888777766666555444
No 168
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.13 E-value=1.8e-09 Score=97.26 Aligned_cols=152 Identities=16% Similarity=0.173 Sum_probs=116.9
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHhHHhhhh----hch-hHHHHHHHHHHHHHHHHHHhhhh------HHHHHHHHHHH
Q 043735 75 CQYNSETLTLFTSSLYLAALLSSLVASSVTRK----FGR-KKSMLFGGVLFFAGALINGFAQG------VWMLIVGRLLL 143 (336)
Q Consensus 75 ~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr----~Gr-r~~l~~~~~~~~i~~~~~~~~~~------~~~~~~~r~l~ 143 (336)
+|++...+|.+..+.=+.-++..|+.|.+.|| +|| |+.++++.+..++.+.++..+++ .....+...+.
T Consensus 43 ~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~ 122 (467)
T COG2211 43 FGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLL 122 (467)
T ss_pred cCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHH
Confidence 49999999999999999999999999999995 776 45677787888888887776653 33455566888
Q ss_pred hhhhhhhhhhHHHHhhhcC-CCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccC----CchhHHHHhhhHHHHHHHHHh
Q 043735 144 GFGIGFANQSVPLYLSEMA-PYKYRGALNIGFQLSITIGILIANVLNYFFAKIKG----GWGWRLSLGGAMVPALIITIG 218 (336)
Q Consensus 144 g~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~----~~~w~~~~~~~~~~~~~~~~~ 218 (336)
+++.........++.+|+. +++||.+..+.-..+.++|..+...+...+....+ ..||+...++.++++++..+.
T Consensus 123 ~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~ 202 (467)
T COG2211 123 GLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLF 202 (467)
T ss_pred HHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHH
Confidence 8888888888888888886 55789999999999999998887777766665433 347888877777776665554
Q ss_pred hc-ccCCCh
Q 043735 219 SL-VLPDTP 226 (336)
Q Consensus 219 ~~-~~~e~~ 226 (336)
.+ -.+|.+
T Consensus 203 ~~~~v~ER~ 211 (467)
T COG2211 203 CFFNVKERV 211 (467)
T ss_pred HHHHhhccc
Confidence 43 355543
No 169
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.13 E-value=3.2e-09 Score=94.62 Aligned_cols=145 Identities=19% Similarity=0.258 Sum_probs=121.0
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHH
Q 043735 77 YNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVPL 156 (336)
Q Consensus 77 ~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~~ 156 (336)
.+....|.+.+...+.-++.-.+..++.+|+|.|+.++++.++.++=..+++++++.+.+.+.+.+.|+..+........
T Consensus 256 ~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fk 335 (412)
T PF01306_consen 256 QGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFK 335 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcCCCccchhHHHH-HHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhh-cccCC
Q 043735 157 YLSEMAPYKYRGALNIG-FQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGS-LVLPD 224 (336)
Q Consensus 157 ~~~~~~~~~~r~~~~~~-~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~e 224 (336)
|+.+.+|+|..++...+ .+.+..+|..+.+.++|.+.+ +.|.+..|++.+.+.+...++. +.+++
T Consensus 336 YI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd---~~G~~~tylimg~iv~~~~li~~f~l~~ 402 (412)
T PF01306_consen 336 YITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYD---RIGFQHTYLIMGLIVLPFTLISAFTLKK 402 (412)
T ss_dssp HHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred HHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHh---hcCcHHHHHHHHHHHHHHHHHheeeecC
Confidence 99999999887777776 578889999999999999988 4678888877777665555544 44543
No 170
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.13 E-value=4e-09 Score=88.04 Aligned_cols=150 Identities=18% Similarity=0.180 Sum_probs=112.0
Q ss_pred cccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhh-------hhHHHHHHHHHHHh
Q 043735 72 NQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFA-------QGVWMLIVGRLLLG 144 (336)
Q Consensus 72 ~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~-------~~~~~~~~~r~l~g 144 (336)
++.+|+|.+|...+.++..+|..+| ++.|.+.|++|+|.++.++.+...++..+...+ .++|.+.+..++.|
T Consensus 29 k~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~ 107 (250)
T PF06813_consen 29 KSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGG 107 (250)
T ss_pred HHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHc
Confidence 5566999999999999999999875 888999999999999999999999998766542 35677777778888
Q ss_pred hhhhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCC
Q 043735 145 FGIGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPD 224 (336)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e 224 (336)
.+.+...+.......+.||. +||.+.++.-...++++.+-..+...+.+. ..-...+.....+.++..+..++++.
T Consensus 108 ~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f~~---~~~~fll~la~~~~~v~l~~~~~vr~ 183 (250)
T PF06813_consen 108 NSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFFGD---DPSSFLLFLAVLPAVVCLVAMFFVRP 183 (250)
T ss_pred ccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHcCC---ChHHHHHHHHHHHHHHHHHHhhheec
Confidence 87766667777777788984 799999999999999888776665555442 12233333344444444455555554
Q ss_pred Ch
Q 043735 225 TP 226 (336)
Q Consensus 225 ~~ 226 (336)
.|
T Consensus 184 ~~ 185 (250)
T PF06813_consen 184 VP 185 (250)
T ss_pred cC
Confidence 43
No 171
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.13 E-value=1e-09 Score=90.89 Aligned_cols=134 Identities=13% Similarity=0.056 Sum_probs=107.0
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHH-HHHhhhhHHHHHHHHHHHhhhhhhhhh
Q 043735 74 YCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGAL-INGFAQGVWMLIVGRLLLGFGIGFANQ 152 (336)
Q Consensus 74 ~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~-~~~~~~~~~~~~~~r~l~g~~~~~~~~ 152 (336)
.+|+|+...+-+.+..+.-.++.+++.|.++||+|++-+.+.+.++..+..- ...+ +.+.=.+...+.|+.....-.
T Consensus 294 rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~lGLsysllAc 371 (459)
T KOG4686|consen 294 RFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMTFLGLSYSLLAC 371 (459)
T ss_pred hhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHHHHhhhHHHHHH
Confidence 3499999999999999999999999999999999999877776665555442 2222 223334567788888887777
Q ss_pred hHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhH
Q 043735 153 SVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAM 209 (336)
Q Consensus 153 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~ 209 (336)
..+..++...|+++.|++.+..+...++|-.+.|++++.+.+..+++.|.-.|.+..
T Consensus 372 slWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~ 428 (459)
T KOG4686|consen 372 SLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLII 428 (459)
T ss_pred HHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHH
Confidence 788999999999999999999999999999999999999998766555655555433
No 172
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.12 E-value=3.1e-09 Score=109.21 Aligned_cols=134 Identities=14% Similarity=0.133 Sum_probs=113.4
Q ss_pred cCCCc-hhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhH
Q 043735 76 QYNSE-TLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSV 154 (336)
Q Consensus 76 ~~s~~-~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~ 154 (336)
|++.. +.+++.+...++.++++++.|++.||+++|+++.++.++.+++.++..+..+.+.+++..++.|++.+...+..
T Consensus 264 g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 343 (1146)
T PRK08633 264 GLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVPL 343 (1146)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHH
Confidence 78888 89999999999999999999999999999999988888888888888877888888888999999999888888
Q ss_pred HHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHH
Q 043735 155 PLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVP 211 (336)
Q Consensus 155 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~ 211 (336)
..++.+..|++.||+++++.+....+|..+++.+++.+... ..++...+++.+.+
T Consensus 344 ~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~--~~~~~~~~~~~~~~ 398 (1146)
T PRK08633 344 NALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGL--GLSPAGLFYLIALV 398 (1146)
T ss_pred HHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHh--ccCHHHHHHHHHHH
Confidence 99999999999999999999999999988887777666442 13455555544443
No 173
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.12 E-value=1.5e-09 Score=98.65 Aligned_cols=120 Identities=12% Similarity=0.071 Sum_probs=99.3
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHhHHhhh-hhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHH
Q 043735 77 YNSETLTLFTSSLYLAALLSSLVASSVTR-KFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVP 155 (336)
Q Consensus 77 ~s~~~~~~~~~~~~~~~~i~~~~~g~l~d-r~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~ 155 (336)
.++.+.+++.+...++...+..+.+++.| |++.|+.+..+.++.+++.++.+..++++.+.+..++.+++.+...+...
T Consensus 240 ~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~ 319 (400)
T PRK11646 240 GSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPARE 319 (400)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccHH
Confidence 35677888888877777666666666665 56767777778888888877777778887777778888888888888888
Q ss_pred HHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 043735 156 LYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIK 196 (336)
Q Consensus 156 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 196 (336)
.++.|..|+++||+..++++....+|..++|.+.+.+.+..
T Consensus 320 ~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~ 360 (400)
T PRK11646 320 TLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLG 360 (400)
T ss_pred HHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHH
Confidence 99999999999999999999999999999999999998764
No 174
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.12 E-value=1.9e-09 Score=99.13 Aligned_cols=147 Identities=14% Similarity=0.096 Sum_probs=94.8
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHH---HHHHHHHhh--hhHHHHHHHHHHHhhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFF---AGALINGFA--QGVWMLIVGRLLLGFGIGFA 150 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~---i~~~~~~~~--~~~~~~~~~r~l~g~~~~~~ 150 (336)
|.+..+.++......++..++.++.|+++||+|+++....+..+.. ++.+..... .+.+......++.|++....
T Consensus 283 g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 362 (438)
T TIGR00712 283 HFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGP 362 (438)
T ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccH
Confidence 7888889999999999999999999999999975432222322221 111111121 23333333444555443222
Q ss_pred hhhHHHHhhhcCCCccchhHHHHHHHHHHHHH-HHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhh-cccCCC
Q 043735 151 NQSVPLYLSEMAPYKYRGALNIGFQLSITIGI-LIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGS-LVLPDT 225 (336)
Q Consensus 151 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~-~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~e~ 225 (336)
.........|.+|+++|+.+.++.+....+|+ .++|.+.+.+.+. .||...+++..+..+++.+.. +.++|.
T Consensus 363 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (438)
T TIGR00712 363 VMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF---FGWDGGFMVMIGGSILAVILLIVVMIGE 436 (438)
T ss_pred HHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHh---ccchHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 22223467799999999999999988877764 6799999998874 468888776655544444433 455654
No 175
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.12 E-value=4.5e-10 Score=98.21 Aligned_cols=143 Identities=14% Similarity=0.031 Sum_probs=110.9
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhh-------hHHHHHHHHHHHhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQ-------GVWMLIVGRLLLGFGIG 148 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~-------~~~~~~~~r~l~g~~~~ 148 (336)
+.++.+.+.......+...+..+.+|+++||+|.+|++.+....++++..+..+.. +....++..+..+++.|
T Consensus 250 g~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G 329 (417)
T COG2223 250 GLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAG 329 (417)
T ss_pred CCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhc
Confidence 89999999999999999999999999999999999999999999999988777653 33333333444444444
Q ss_pred hhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcc
Q 043735 149 FANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLV 221 (336)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ 221 (336)
........++..++|+ +-|.+.++.....++|+..-|...+...+..+ .+...|++.....+++.+..+.
T Consensus 330 ~GnGsvfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg--~~~~~f~~~~~~~~~a~v~~~~ 399 (417)
T COG2223 330 LGNGSVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTG--SYTGAFMLLLAFYLVALVLTWA 399 (417)
T ss_pred cCcchheeechHHHHh-hhhHHHHHHHHhccccccchhHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHH
Confidence 4444556666677754 57899999999999999999988888887654 5888888777776666655443
No 176
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.11 E-value=6.9e-10 Score=99.54 Aligned_cols=126 Identities=18% Similarity=0.198 Sum_probs=92.4
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhch-hHH-HHHHHHH-HHHHHHHHHh--hhhHHHHHHHHHHHhhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGR-KKS-MLFGGVL-FFAGALINGF--AQGVWMLIVGRLLLGFGIGFA 150 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Gr-r~~-l~~~~~~-~~i~~~~~~~--~~~~~~~~~~r~l~g~~~~~~ 150 (336)
|.+..+.+++.+...++..++.++.|++.||.++ |+. +...... ..++...... ..+.....+..++.|+.....
T Consensus 248 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 327 (379)
T TIGR00881 248 GFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGP 327 (379)
T ss_pred CCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhh
Confidence 7888999999999999999999999999998643 332 2222211 1222222222 234455556667777766555
Q ss_pred hhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHH
Q 043735 151 NQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLS 204 (336)
Q Consensus 151 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~ 204 (336)
.+....+..|..|+++|+++.++.+....+|..++|.+.+.+.+. .||++.
T Consensus 328 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~---~g~~~~ 378 (379)
T TIGR00881 328 QMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADG---FGWAGA 378 (379)
T ss_pred hHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHh---hccccc
Confidence 666677899999999999999999999999999999999999884 467654
No 177
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.11 E-value=2.1e-09 Score=100.11 Aligned_cols=119 Identities=18% Similarity=0.191 Sum_probs=103.8
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHh----hhhHHHHHHHHHHHhhhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGF----AQGVWMLIVGRLLLGFGIGFAN 151 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~----~~~~~~~~~~r~l~g~~~~~~~ 151 (336)
|.+..+.++......++..++.++.|++.||+|||+++..+.++.+++..+..+ ..+.+.+....++.|++.+...
T Consensus 287 g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~ 366 (485)
T TIGR00711 287 GYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFF 366 (485)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 788999999999999999999999999999999999999998888888876652 1345666777889999998888
Q ss_pred hhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 043735 152 QSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAK 194 (336)
Q Consensus 152 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~ 194 (336)
+.......+..|+++|+.+.++.+....+|+.+++.+.+.+.+
T Consensus 367 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 367 MPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILT 409 (485)
T ss_pred HHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777788888999999999999999999999999998887765
No 178
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.09 E-value=5.4e-09 Score=94.18 Aligned_cols=116 Identities=17% Similarity=0.211 Sum_probs=90.5
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhh-----hhHHHHHHHHHHHhhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFA-----QGVWMLIVGRLLLGFGIGFA 150 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~-----~~~~~~~~~r~l~g~~~~~~ 150 (336)
|.++.+.+++.+...++..++.++.|++.||+|||+.+..+..+..++.++.... ++...+.+..++.|++.+..
T Consensus 238 g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 317 (385)
T TIGR00710 238 GVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMI 317 (385)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence 7888999999999999999999999999999999999988887777776655443 23445555677888988888
Q ss_pred hhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHh
Q 043735 151 NQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFF 192 (336)
Q Consensus 151 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~ 192 (336)
.+.......|..| ++|+++.++.+.....++.+.+.+.+..
T Consensus 318 ~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~~ 358 (385)
T TIGR00710 318 SSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVSLI 358 (385)
T ss_pred HHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8888888889886 5789999988777655444444444433
No 179
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.09 E-value=1.1e-08 Score=93.08 Aligned_cols=120 Identities=18% Similarity=0.170 Sum_probs=97.2
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhh-----hhHHHHHHHHHHHhhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFA-----QGVWMLIVGRLLLGFGIGFA 150 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~-----~~~~~~~~~r~l~g~~~~~~ 150 (336)
|++..+.++......++..++.++.|++.||+|+|+.+..+.++..++.++.... .+.+.+.+..++.|++.+..
T Consensus 247 g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~ 326 (406)
T PRK15402 247 QLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLA 326 (406)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHH
Confidence 7788888888888888999999999999999999999988888777776655543 24556677788899988887
Q ss_pred hhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 043735 151 NQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIK 196 (336)
Q Consensus 151 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 196 (336)
.+......... ++++||+..+.++....+|..+++.+.+.+.+..
T Consensus 327 ~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~ 371 (406)
T PRK15402 327 NAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGG 371 (406)
T ss_pred hhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 76665554433 4588999999999999999999999999887643
No 180
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.09 E-value=4.3e-09 Score=92.02 Aligned_cols=173 Identities=9% Similarity=-0.014 Sum_probs=118.8
Q ss_pred HhhhhHHHHHHHHHHHhhhhhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccC----------
Q 043735 128 GFAQGVWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKG---------- 197 (336)
Q Consensus 128 ~~~~~~~~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~---------- 197 (336)
+...+++.++++.++.|.|.+..++....++++.-+++++++.+++.+...++|..++|.+.+.+.....
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 3457899999999999999999999999999999999999999999999999999999999998774210
Q ss_pred ---CchhHHHHhhhHHHHHHHHHhhcc--cCCChHHHHhcCChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccch
Q 043735 198 ---GWGWRLSLGGAMVPALIITIGSLV--LPDTPNSMIERGQRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPW 272 (336)
Q Consensus 198 ---~~~w~~~~~~~~~~~~~~~~~~~~--~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (336)
...|++++++.+...++..+.+.+ +||.++ ++++ + . .+ ++ ..+.
T Consensus 85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~------~~~~----------------~-----~-~~--~~-~~~~ 133 (310)
T TIGR01272 85 NAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQE------ADVA----------------R-----V-SS--GD-TTQK 133 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCc------cccc----------------c-----c-cc--cc-ccch
Confidence 136888888665554443333333 344220 0000 0 0 00 00 0000
Q ss_pred hhhccccchhHHHHHHHHHHHHHhhchhHHHHcHHHHHHh---cCCCCcHHHHHHHHHhHhhheec
Q 043735 273 GNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPVLFNT---IGFGNDASLMSAVITGLVNACAT 335 (336)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~G~s~~~~~~~~~~~~~~~~~~~ 335 (336)
++.++ ++..+...+..++..........|.+.++++ .|++..+++...+......++|+
T Consensus 134 ~~~~~----~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr 195 (310)
T TIGR01272 134 TSAFQ----FTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGR 195 (310)
T ss_pred hhHHh----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 11222 2234444555666666677888999999964 48999999998888888777664
No 181
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.09 E-value=1.7e-09 Score=94.73 Aligned_cols=155 Identities=21% Similarity=0.213 Sum_probs=117.4
Q ss_pred ccccchhhHHhhhccchhhhcccCCCCcccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhh--chhHHHHHH-HHHHH
Q 043735 45 GGVTSMPSFLKRFFPSVYRKQQANSSTNQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKF--GRKKSMLFG-GVLFF 121 (336)
Q Consensus 45 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~--Grr~~l~~~-~~~~~ 121 (336)
+..-+.|.|+.+.. |+|..++++..+.+-++...|.+++|+++||+ |||....+. +++..
T Consensus 270 gi~dW~p~YL~e~k-----------------~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~ 332 (448)
T COG2271 270 GINDWGPLYLSEVK-----------------GFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLIT 332 (448)
T ss_pred HHhhhHHHHHHHhc-----------------CCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHH
Confidence 33456777776642 88999999999999999999999999999987 777655443 33344
Q ss_pred HHHHHHHhhh--hHHHHHHHHHHHhhhhhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHH-HHHHHHHHHHHhhcccCC
Q 043735 122 AGALINGFAQ--GVWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYKYRGALNIGFQLSITI-GILIANVLNYFFAKIKGG 198 (336)
Q Consensus 122 i~~~~~~~~~--~~~~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~l~~~~~~~~~~ 198 (336)
++.+..-.++ |++...++.+..|+..-+..-.......|..|++--|.+.|+...+.-+ |...+....+.+.+.
T Consensus 333 ~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~--- 409 (448)
T COG2271 333 ASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADT--- 409 (448)
T ss_pred HHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEec---
Confidence 4444444444 4578888889999877666677777889999999999999999998888 777777777777663
Q ss_pred chhHHHHhhhHHHHHHHHHhh
Q 043735 199 WGWRLSLGGAMVPALIITIGS 219 (336)
Q Consensus 199 ~~w~~~~~~~~~~~~~~~~~~ 219 (336)
+||...|++..+.++++.+..
T Consensus 410 ~gW~g~Fi~~~~~a~l~~lll 430 (448)
T COG2271 410 WGWDGGFIVLSIAALLAILLL 430 (448)
T ss_pred CCCcchHHHHHHHHHHHHHHH
Confidence 679888887666666555544
No 182
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.08 E-value=4.9e-09 Score=93.97 Aligned_cols=140 Identities=12% Similarity=0.049 Sum_probs=92.2
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhch---hHHHHH-HHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGR---KKSMLF-GGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFAN 151 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Gr---r~~l~~-~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~ 151 (336)
|++.+ .+...++..+...++ .++++||.+| |+.... ..++.++......+..+....++.-.+.+++....+
T Consensus 223 g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 298 (368)
T TIGR00903 223 GLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAY 298 (368)
T ss_pred CCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhH
Confidence 55543 456666655555555 4677777654 333332 333344444444444444444555566777777777
Q ss_pred hhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCC
Q 043735 152 QSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPD 224 (336)
Q Consensus 152 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e 224 (336)
+....+.+|.+|++.|+++.++.+....+|+..+|++.+.+.. +.+..|.+.+++.++..+....+++
T Consensus 299 ~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~-----~~~~~f~~~~~~~~i~~~~~~~~~~ 366 (368)
T TIGR00903 299 AIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS-----SAEAYFTFLAILITIAFAIALLLPN 366 (368)
T ss_pred HHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc-----CHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 8788999999999999999999999999999999988877763 4556666666666555555444444
No 183
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.08 E-value=6.2e-09 Score=93.96 Aligned_cols=139 Identities=12% Similarity=0.131 Sum_probs=99.9
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHhhhhhhhhhhH
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGF-AQGVWMLIVGRLLLGFGIGFANQSV 154 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~-~~~~~~~~~~r~l~g~~~~~~~~~~ 154 (336)
|.+..+.+++.+...++..++.++.|++.||+|+|+.+..+..+..++.+.... .++.+...+..++.+++.....+..
T Consensus 231 g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 310 (382)
T PRK10091 231 GFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPL 310 (382)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHH
Confidence 888999999999999999999999999999999999999888887777755543 4455555566666666654444433
Q ss_pred H-HHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHh
Q 043735 155 P-LYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIG 218 (336)
Q Consensus 155 ~-~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 218 (336)
. ....+..+++.++.. ..+....+|..++|.+++.+.+.. .+|++.+...++..++....
T Consensus 311 ~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~--~~~~~~~~~~~~~~~~~~~~ 371 (382)
T PRK10091 311 QILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLG--LAYNYVALPAALLSFAAMSS 371 (382)
T ss_pred HHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcc--cCcchHHHHHHHHHHHHHHH
Confidence 3 344444454445544 345677899999999999988753 35777777666555444433
No 184
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.07 E-value=4.2e-08 Score=90.37 Aligned_cols=228 Identities=19% Similarity=0.185 Sum_probs=144.1
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHH-HHHHHHHHHHHHHhh-h-hHHHHHHHHHHHhhhhhhhhhhHHHH
Q 043735 81 TLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLF-GGVLFFAGALINGFA-Q-GVWMLIVGRLLLGFGIGFANQSVPLY 157 (336)
Q Consensus 81 ~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~-~~~~~~i~~~~~~~~-~-~~~~~~~~r~l~g~~~~~~~~~~~~~ 157 (336)
..++..++..+..++..++.|.++|+-|+||.++. ...+..+++.+..+. + +++...+..++..++.+.......++
T Consensus 71 ~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~ 150 (477)
T PF11700_consen 71 LWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAY 150 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34678888899999999999999999987765554 445555566555553 3 45555555666667888888888999
Q ss_pred hhhcCCCccc--------------------------hhHHHHHHHHHHHHHHHHHHHHHHhhcccC-----CchhHHHHh
Q 043735 158 LSEMAPYKYR--------------------------GALNIGFQLSITIGILIANVLNYFFAKIKG-----GWGWRLSLG 206 (336)
Q Consensus 158 ~~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~-----~~~w~~~~~ 206 (336)
+.|+.+++.+ ++..+.-...+.+|+++.-.+...+....+ ..+.|..+.
T Consensus 151 LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~ 230 (477)
T PF11700_consen 151 LPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFL 230 (477)
T ss_pred hHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHH
Confidence 9999999888 888888777777888776666554432221 134577776
Q ss_pred hhHHHHHHH-HHhhcccCCChHHHHhcCChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHH
Q 043735 207 GAMVPALII-TIGSLVLPDTPNSMIERGQRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLT 285 (336)
Q Consensus 207 ~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (336)
+.++.-++. ....+++||.|+....+.......... + ..++.+|+.++.+..
T Consensus 231 ~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~-----------------------~----~l~~t~k~~~~~~~~ 283 (477)
T PF11700_consen 231 IVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGF-----------------------K----RLWRTFKEIRKLRQL 283 (477)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHH-----------------------H----HHHHHHHHHHhChHH
Confidence 666654333 334456787763100000000000000 0 011122222223344
Q ss_pred HHHHHHHHHHhhchhHHHHcHHHHHH-hcCCCCcHHHHHHHHHhHhhheec
Q 043735 286 MAILIPFFQQLTGINVIMFYAPVLFN-TIGFGNDASLMSAVITGLVNACAT 335 (336)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~s~~~~~~~~~~~~~~~~~~~ 335 (336)
..+++.+++..-+...+......+.+ .+|++..+......+..+.+++|+
T Consensus 284 ~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga 334 (477)
T PF11700_consen 284 FLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGA 334 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHH
Confidence 55566666655666777777777775 689999998888888888777664
No 185
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.07 E-value=2.8e-09 Score=99.52 Aligned_cols=119 Identities=14% Similarity=0.070 Sum_probs=103.9
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHhhhhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFA---QGVWMLIVGRLLLGFGIGFANQ 152 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~---~~~~~~~~~r~l~g~~~~~~~~ 152 (336)
|.|..+.+.......++..++.++.|++.||+|||+++..+.++..++.++.... ++.+......++.|++.|...+
T Consensus 291 g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~ 370 (495)
T PRK14995 291 GLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALL 370 (495)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHH
Confidence 8899999999999999999999999999999999999988888887777655432 3555666778899999999888
Q ss_pred hHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 043735 153 SVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAK 194 (336)
Q Consensus 153 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~ 194 (336)
.....+.+..|+++++.+.+.++....+|+.+|+.+.+.+.+
T Consensus 371 ~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 371 ASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888999999999999999999999999999988887754
No 186
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.06 E-value=2e-09 Score=97.92 Aligned_cols=133 Identities=8% Similarity=-0.064 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHH-hh-----hhHHHHHHHHHHHhhhhhhhhhhHHHHhh
Q 043735 86 TSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALING-FA-----QGVWMLIVGRLLLGFGIGFANQSVPLYLS 159 (336)
Q Consensus 86 ~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~-~~-----~~~~~~~~~r~l~g~~~~~~~~~~~~~~~ 159 (336)
..+..+...+..+++|+++||+|+|+++.++.+...++..... .. .+++.+.+..+...++.|........++.
T Consensus 292 ~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip 371 (462)
T PRK15034 292 AFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIA 371 (462)
T ss_pred HHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhH
Confidence 4445677888999999999999999999998887777764322 12 24555555554544555555556666777
Q ss_pred hcCCC---------------------ccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHh
Q 043735 160 EMAPY---------------------KYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIG 218 (336)
Q Consensus 160 ~~~~~---------------------~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 218 (336)
+.+|+ ++-|.+.++......+|+.+.|.+.+...+..+ ++...++...+.-+++.++
T Consensus 372 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g--~~~~~~~~~~~~~~~~~~~ 449 (462)
T PRK15034 372 VIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTG--SPVGAMKVFLIFYIVCVLL 449 (462)
T ss_pred HHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcC--CcHHHHHHHHHHHHHHHHH
Confidence 77764 134678889999999999999988887776654 4666676666655555544
Q ss_pred hc
Q 043735 219 SL 220 (336)
Q Consensus 219 ~~ 220 (336)
.+
T Consensus 450 ~w 451 (462)
T PRK15034 450 TW 451 (462)
T ss_pred HH
Confidence 44
No 187
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.06 E-value=1.6e-09 Score=100.29 Aligned_cols=146 Identities=18% Similarity=0.172 Sum_probs=130.5
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhc--hhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFG--RKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQS 153 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~G--rr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~ 153 (336)
+.+..+.+.+.++..+.-.++.+..|+++|+.. ++.+..++++..+++.+.+.+.++++.++..-.+.|++.|.....
T Consensus 329 g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l 408 (509)
T KOG2504|consen 329 GLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSL 408 (509)
T ss_pred CCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999987 566777888888888888999999999999999999999999888
Q ss_pred HHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccC
Q 043735 154 VPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLP 223 (336)
Q Consensus 154 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 223 (336)
...++.|..+.++-..+.++......++.+++|++++.+.+..+ +|...|+..++..+++.++++..|
T Consensus 409 ~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg--~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 409 TPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITG--NYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccC--CeeeehhhcChHHHHHHHHHHHhH
Confidence 88999999999999999999999999999999999998888655 477788888877777776666655
No 188
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.05 E-value=6.4e-09 Score=106.81 Aligned_cols=133 Identities=13% Similarity=0.067 Sum_probs=108.5
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhh--------------------hhHHH
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFA--------------------QGVWM 135 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~--------------------~~~~~ 135 (336)
|.+..+.+++.+.+.++.++++++.|+++|+.++++.+..+.++.+++.+...+. .+.+.
T Consensus 257 g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (1140)
T PRK06814 257 GGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWR 336 (1140)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHH
Confidence 8889999999999999999999999999998888777666666665555444432 56677
Q ss_pred HHHHHHHHhhhhhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHH
Q 043735 136 LIVGRLLLGFGIGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMV 210 (336)
Q Consensus 136 ~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~ 210 (336)
+++..++.|++.+...+...+++.+..|++.||++++..++...+|..+++++.+.+.... .++...+++.++
T Consensus 337 ~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~--~~~~~~~~~~~~ 409 (1140)
T PRK06814 337 ILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALG--FSIPWIILFIAL 409 (1140)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhc--cCHHHHHHHHHH
Confidence 7888899999999999999999999999999999999999999999999999988886432 245555544333
No 189
>PRK09848 glucuronide transporter; Provisional
Probab=99.04 E-value=4.3e-08 Score=90.46 Aligned_cols=120 Identities=15% Similarity=0.200 Sum_probs=96.5
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHhhhhhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQ--GVWMLIVGRLLLGFGIGFANQS 153 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~--~~~~~~~~r~l~g~~~~~~~~~ 153 (336)
|.+....++......++..++.++++++.||+|+|+++.++.++..++.+...+.+ +.+.+.+..++.|+|.+...+.
T Consensus 260 g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~ 339 (448)
T PRK09848 260 NDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTV 339 (448)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHH
Confidence 54544444545555677888999999999999999999999988888877666543 5666777788899999999999
Q ss_pred HHHHhhhcCCCc-------cchhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 043735 154 VPLYLSEMAPYK-------YRGALNIGFQLSITIGILIANVLNYFFAKI 195 (336)
Q Consensus 154 ~~~~~~~~~~~~-------~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~ 195 (336)
..++.+|..|.+ ++|...+.++....+|..+++.+.+.+.+.
T Consensus 340 ~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~ 388 (448)
T PRK09848 340 MWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGL 388 (448)
T ss_pred HHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988754 348888999999999999999988877654
No 190
>PRK09848 glucuronide transporter; Provisional
Probab=99.03 E-value=4.6e-09 Score=96.90 Aligned_cols=116 Identities=13% Similarity=0.161 Sum_probs=77.1
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhh----chhHHH-HHHHHHHHHHHHHHHhhh-------hHHHHHHHHHH
Q 043735 75 CQYNSETLTLFTSSLYLAALLSSLVASSVTRKF----GRKKSM-LFGGVLFFAGALINGFAQ-------GVWMLIVGRLL 142 (336)
Q Consensus 75 ~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~----Grr~~l-~~~~~~~~i~~~~~~~~~-------~~~~~~~~r~l 142 (336)
+|++..++|.+.++..+..++..++.|+++||. |||+.. .++.+...+..++....+ ......+..++
T Consensus 39 ~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (448)
T PRK09848 39 AGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAYLTYMG 118 (448)
T ss_pred cCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHHHHHHHH
Confidence 389999999999999999999999999999996 777644 555555554444332111 12233444567
Q ss_pred HhhhhhhhhhhHHHHhhhcCC-CccchhHHHHHHHHHH-----HHHHHHHHHHH
Q 043735 143 LGFGIGFANQSVPLYLSEMAP-YKYRGALNIGFQLSIT-----IGILIANVLNY 190 (336)
Q Consensus 143 ~g~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~-----~g~~~~~~l~~ 190 (336)
.+++.+...+...++..|..+ +++|.+..+.-..+.+ ++..++|.+..
T Consensus 119 ~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~ 172 (448)
T PRK09848 119 LGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKN 172 (448)
T ss_pred HHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777777777777777777654 4678877665544333 44445555544
No 191
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.03 E-value=4.9e-08 Score=88.15 Aligned_cols=149 Identities=17% Similarity=0.260 Sum_probs=115.3
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhh-hhHHHHHHH----HHHHhhhhhhhh
Q 043735 77 YNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFA-QGVWMLIVG----RLLLGFGIGFAN 151 (336)
Q Consensus 77 ~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~-~~~~~~~~~----r~l~g~~~~~~~ 151 (336)
.+....+.+.++..++-.+.-...+++..|+|.|+++.++.+.+++=..+.+.. ++.+...+. ..+.|+..+...
T Consensus 240 ~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~ 319 (400)
T PF03825_consen 240 YSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFH 319 (400)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHH
Confidence 566677777788888888999999999999999999999999999988888876 454443333 456999999999
Q ss_pred hhHHHHhhhcCCCccchhHHHHHHH-HHHHHHHHHHHHHHHhhcccCC---chhHHHHhhhHHHHHHHHHhh-cccCCC
Q 043735 152 QSVPLYLSEMAPYKYRGALNIGFQL-SITIGILIANVLNYFFAKIKGG---WGWRLSLGGAMVPALIITIGS-LVLPDT 225 (336)
Q Consensus 152 ~~~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~~~~l~~~~~~~~~~---~~w~~~~~~~~~~~~~~~~~~-~~~~e~ 225 (336)
.....++.+..|++.|+++.++++. ..++|..++..++|++.+..+. ..|...+.+.++..++..+.. ++.+|+
T Consensus 320 ~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 320 AASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred HHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 9999999999999999999998776 4789999999999999885441 235555555555544443333 344543
No 192
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.03 E-value=3.4e-09 Score=94.62 Aligned_cols=104 Identities=14% Similarity=0.142 Sum_probs=88.0
Q ss_pred cCCCchhHHHHHHHH-HHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhh-----------hhHHHHHHHHHHH
Q 043735 76 QYNSETLTLFTSSLY-LAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFA-----------QGVWMLIVGRLLL 143 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~-~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~-----------~~~~~~~~~r~l~ 143 (336)
|++.++.+.+.++.. ++..++.+++|++.||+|||+.+..+.++..+...+..+. ++.+.+....++.
T Consensus 240 g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 319 (356)
T TIGR00901 240 GFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLE 319 (356)
T ss_pred CCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHH
Confidence 889999988887665 6788999999999999999999988888887776654442 3456777788899
Q ss_pred hhhhhhhhhhHHHHhhhcCCCccchhHHHHHHHHHH
Q 043735 144 GFGIGFANQSVPLYLSEMAPYKYRGALNIGFQLSIT 179 (336)
Q Consensus 144 g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 179 (336)
+++.+...+...+++.|.+|+++||+..++++...+
T Consensus 320 ~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 320 AVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 999999999999999999999999999998877654
No 193
>PRK10054 putative transporter; Provisional
Probab=99.03 E-value=7.8e-09 Score=93.73 Aligned_cols=134 Identities=7% Similarity=-0.005 Sum_probs=106.6
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHhhhhhhhhhhH
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFA-QGVWMLIVGRLLLGFGIGFANQSV 154 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~-~~~~~~~~~r~l~g~~~~~~~~~~ 154 (336)
+.+....+.+.....+.....+++.|++.||+++|+.+..+..+..++.....+. ++.+.+.+..++.|++.+...|..
T Consensus 240 ~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~ 319 (395)
T PRK10054 240 DFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGE 319 (395)
T ss_pred chHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhH
Confidence 4556667778888877777888899999999999999999988888887666654 567767778889999988888888
Q ss_pred HHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHH
Q 043735 155 PLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPAL 213 (336)
Q Consensus 155 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~ 213 (336)
..++.+..|++.|++..+..+ ...+|..++|.+++.+.+.. |....+++.+....
T Consensus 320 ~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~---g~~~~~~~~~~~~~ 374 (395)
T PRK10054 320 YMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTL---PPWSLFVILALAIV 374 (395)
T ss_pred HHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHc---ChhhHHHHHHHHHH
Confidence 889999999999999888655 56689999999999999854 45556655444433
No 194
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.03 E-value=1.6e-08 Score=93.87 Aligned_cols=118 Identities=8% Similarity=0.112 Sum_probs=92.9
Q ss_pred CCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHh-----hhhHHHHHHHHHHHhhhhhhhhh
Q 043735 78 NSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGF-----AQGVWMLIVGRLLLGFGIGFANQ 152 (336)
Q Consensus 78 s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~-----~~~~~~~~~~r~l~g~~~~~~~~ 152 (336)
+.+..+++.+...++..++.+++++++||+|+|+.+.++.++.+++.+.... .++.+.+++.-++.|++.+...+
T Consensus 264 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~ 343 (473)
T PRK10429 264 DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWV 343 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHH
Confidence 3445567777777888999999999999999999999888776666654432 24566667777888999999999
Q ss_pred hHHHHhhhcCCC-----cc--chhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 043735 153 SVPLYLSEMAPY-----KY--RGALNIGFQLSITIGILIANVLNYFFAKI 195 (336)
Q Consensus 153 ~~~~~~~~~~~~-----~~--r~~~~~~~~~~~~~g~~~~~~l~~~~~~~ 195 (336)
...++++|..+. .+ .|...+......-+|..+++.+.+++.+.
T Consensus 344 ~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~ 393 (473)
T PRK10429 344 LQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGL 393 (473)
T ss_pred HHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999662 22 36688889999999999999999888754
No 195
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.02 E-value=1.7e-08 Score=90.01 Aligned_cols=138 Identities=22% Similarity=0.253 Sum_probs=82.7
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHH--HH-HHHHhhh----hHH-HHHHHHHHHhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFA--GA-LINGFAQ----GVW-MLIVGRLLLGFGI 147 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i--~~-~~~~~~~----~~~-~~~~~r~l~g~~~ 147 (336)
|+|.+++|.+.++..+...+.+++.|.++||.|.||-+++......+ +. +...+.+ |.+ ..+++-...|+..
T Consensus 39 GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f 118 (412)
T PF01306_consen 39 GLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVF 118 (412)
T ss_dssp ---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999977766544333222 22 2222222 222 2233334445555
Q ss_pred hhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhh
Q 043735 148 GFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGS 219 (336)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 219 (336)
.+..++.-+++.++. ++.+.=.|-.-+.+++|.+++..++|.+.+. +-...+++....+++..++.
T Consensus 119 ~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~i----~p~~~fwi~s~~~~il~lll 184 (412)
T PF01306_consen 119 NAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFNI----NPNIIFWIASAAAIILLLLL 184 (412)
T ss_dssp TTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeeee----CccHHHHHHHHHHHHHHHHH
Confidence 555666656554443 1224444556667778888888888887763 33456665555444443333
No 196
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.01 E-value=6.4e-09 Score=94.82 Aligned_cols=131 Identities=21% Similarity=0.269 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhh--hhhhhhhHHHHhhhcCCCc
Q 043735 88 SLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFG--IGFANQSVPLYLSEMAPYK 165 (336)
Q Consensus 88 ~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~--~~~~~~~~~~~~~~~~~~~ 165 (336)
...+...+.++..|.++||+|||..+.+..+...+..++..+.. +|.++ +.++. .+.......++++|....+
T Consensus 70 ~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~ 144 (463)
T KOG2816|consen 70 TAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEE 144 (463)
T ss_pred hhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-HHHhh----hcccccchhhhhhhhhhheeeccchh
Confidence 44677788999999999999999999999999999888777766 33333 44442 3456677789999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhh-cccCCCh
Q 043735 166 YRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGS-LVLPDTP 226 (336)
Q Consensus 166 ~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~e~~ 226 (336)
+|....++.+.....+..++|.+++.+.+. .|.-..+.+..+..++..+.. +++||+.
T Consensus 145 ~R~~~~gll~~~~~~~~~~~p~~~~~~~~~---~~~a~~f~ia~~~~~~~~~y~~~~l~Esl 203 (463)
T KOG2816|consen 145 ERSSSIGLLSGTFGAGLVIGPALGGYLVKF---LGIALVFLIAAASGILSLLYMLLFLPESL 203 (463)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHh---cCchHHHHHHHHHHHHHHHHHhhcccccc
Confidence 999999999999999999999999999885 456667777666666555544 5788875
No 197
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.00 E-value=1.9e-08 Score=88.35 Aligned_cols=231 Identities=14% Similarity=0.124 Sum_probs=141.6
Q ss_pred cccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhc-----hhHHHHH-HHHHHHHHHHHHHhh-----h--------h
Q 043735 72 NQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFG-----RKKSMLF-GGVLFFAGALINGFA-----Q--------G 132 (336)
Q Consensus 72 ~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~G-----rr~~l~~-~~~~~~i~~~~~~~~-----~--------~ 132 (336)
..|+++...-.+.+.++.++... ..+.+|..+|+.+ ||..+++ +.++...+..+..++ . .
T Consensus 7 IvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~ 85 (403)
T PF03209_consen 7 IVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPF 85 (403)
T ss_pred HHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccccccc
Confidence 34567887777888777776655 5889999999999 7765554 555555555444331 2 1
Q ss_pred -H--HHHHHHHHHHhhhhhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhH
Q 043735 133 -V--WMLIVGRLLLGFGIGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAM 209 (336)
Q Consensus 133 -~--~~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~ 209 (336)
. ....+...+.|+|.+...+...+++.|..|+++|+++.++......+|.+++..+.+.+.+.++...-...+...+
T Consensus 86 ~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a 165 (403)
T PF03209_consen 86 WLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVA 165 (403)
T ss_pred HHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHH
Confidence 1 2345556789999999999999999999999999999999999999999999999988877433111122222222
Q ss_pred HHHHHHHHhhcccCCChHHHHhcCChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHH
Q 043735 210 VPALIITIGSLVLPDTPNSMIERGQRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAIL 289 (336)
Q Consensus 210 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (336)
++.+...++..+-.|.++.... +.+++++.+....++++.+++..++.+..+.
T Consensus 166 ~i~~~l~~ia~wg~E~r~~~~~---------------------------~~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~ 218 (403)
T PF03209_consen 166 LIALLLNLIALWGQEPRRSRRA---------------------------AAAERPRPPFREAWRQVWASPQARRFFVFLF 218 (403)
T ss_pred HHHHHHHHHHHHhcccCCcccc---------------------------cCCCCCCccHHHHHHHHHhCCChhHHHHHHH
Confidence 2222222223333343211000 0001111122334566666666666555554
Q ss_pred HHHHHHhhchhHHHHcH-HHHHHhcCCCCcHHHHHHHHHhHhhhee
Q 043735 290 IPFFQQLTGINVIMFYA-PVLFNTIGFGNDASLMSAVITGLVNACA 334 (336)
Q Consensus 290 ~~~~~~~~~~~~~~~~~-~~~~~~~G~s~~~~~~~~~~~~~~~~~~ 334 (336)
+..... ......+ |+=-+-+|++..++..++...+.+.++|
T Consensus 219 l~t~a~----~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G 260 (403)
T PF03209_consen 219 LGTLAF----FMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLG 260 (403)
T ss_pred HHHHHH----HhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 433222 2222222 3333457999999988888888776654
No 198
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.99 E-value=5.1e-08 Score=88.65 Aligned_cols=138 Identities=13% Similarity=0.146 Sum_probs=96.6
Q ss_pred cCCCchhHHHHHHH-HHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHH---Hhh-hhHHHHHHHHH----HHhhh
Q 043735 76 QYNSETLTLFTSSL-YLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALIN---GFA-QGVWMLIVGRL----LLGFG 146 (336)
Q Consensus 76 ~~s~~~~~~~~~~~-~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~---~~~-~~~~~~~~~r~----l~g~~ 146 (336)
|++.++.+++.... .++..++.+++|++.||+|||+.+..+.++..+..+.. +.. ++.+.+.+.-+ ..|++
T Consensus 241 G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 320 (402)
T PRK11902 241 GFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMG 320 (402)
T ss_pred CCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Confidence 88889999988665 45689999999999999999998877776666554333 333 34455554443 45555
Q ss_pred hhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhc
Q 043735 147 IGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSL 220 (336)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 220 (336)
.+...+....++.+.+|.+++ +.++...++|..+++.+++.+.+. .||+..|...++.+++..+..+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~~---~G~~~~f~~~~~~~~~~~~~~~ 387 (402)
T PRK11902 321 TAAFVALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVEA---YGWPGFYLMTVVIALPGLALLW 387 (402)
T ss_pred HHHHHHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHH---hChHHHHHHHHHHHHHHHHHHH
Confidence 666677777777777776554 444445566776666788888874 5799999888777766655543
No 199
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.98 E-value=6.2e-08 Score=87.80 Aligned_cols=118 Identities=11% Similarity=0.018 Sum_probs=97.6
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHH
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVP 155 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~ 155 (336)
|.++.+.+++.+...++..++++..+++.||.++|+++..+. +.++......+.++++...+..++.|++.+...+...
T Consensus 237 g~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~~ 315 (393)
T PRK11195 237 GITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGI-LMGLVVLLMALQHSLLPAYPLLILIGALGGFFVVPMN 315 (393)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHH-HHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhHH
Confidence 888999999999999999999999999999999998887775 3444444455566777777778889998888887778
Q ss_pred HHhhhcCCCcc-chhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 043735 156 LYLSEMAPYKY-RGALNIGFQLSITIGILIANVLNYFFAK 194 (336)
Q Consensus 156 ~~~~~~~~~~~-r~~~~~~~~~~~~~g~~~~~~l~~~~~~ 194 (336)
+.+.|..|++. +|++.++.+...+++..++..+.+.+..
T Consensus 316 ~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~ 355 (393)
T PRK11195 316 ALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVK 355 (393)
T ss_pred HHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 88888766654 7999999999999999999988886654
No 200
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.97 E-value=2.8e-08 Score=88.16 Aligned_cols=235 Identities=11% Similarity=0.117 Sum_probs=149.4
Q ss_pred cCCCchhH-HHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhH
Q 043735 76 QYNSETLT-LFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSV 154 (336)
Q Consensus 76 ~~s~~~~~-~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~ 154 (336)
|++..|+. -+.-...-.+....++...+.|..|.|++++++.+...+...+..+.++...+-+..+..|++.+. ..+.
T Consensus 36 n~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~a~-evay 114 (412)
T PF01770_consen 36 NFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLATAA-EVAY 114 (412)
T ss_pred CCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHH-HHHH
Confidence 66766653 333444445677788899999999999999999999999999999999999999999999998776 5667
Q ss_pred HHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCCChHHHHhcCC
Q 043735 155 PLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPDTPNSMIERGQ 234 (336)
Q Consensus 155 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 234 (336)
.+++....|+++-.++.+....+.-+|..++..++-.+.... ...++....+......++.+..+++|..++...-+++
T Consensus 115 ~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~-~~sy~~L~~isl~~~~~a~~~~~fLP~~~~S~~f~r~ 193 (412)
T PF01770_consen 115 YSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFG-GVSYFQLNYISLASVSLALLIALFLPMPKRSLFFHRK 193 (412)
T ss_pred HHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHcCCCCcccceecc
Confidence 788888888888888898888888888888888777666533 2456666666555555666666788876654322222
Q ss_pred hHHHHHHHHHHcCC--CcchHHHHHHHHHHHhc-cccccchhhh---ccccchhHHHHHHHHHHHHHhhchhHHHHcHHH
Q 043735 235 RDEAREKLRKIRGV--NDVDEEFNDLVAASEAS-KQVEHPWGNL---LKRKYRPHLTMAILIPFFQQLTGINVIMFYAPV 308 (336)
Q Consensus 235 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (336)
..+..+. ++...+ ++.+++.++.+++.+.. ...+...+.+ ++....++..+...+.+....++++.+..|...
T Consensus 194 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~ 272 (412)
T PF01770_consen 194 PPAEQDA-NESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQS 272 (412)
T ss_pred Ccccccc-ccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 1111100 000000 00000000000000000 0001111112 223344455667777788888888888888888
Q ss_pred HHHhc
Q 043735 309 LFNTI 313 (336)
Q Consensus 309 ~~~~~ 313 (336)
+.++.
T Consensus 273 LW~~v 277 (412)
T PF01770_consen 273 LWDTV 277 (412)
T ss_pred HHHhc
Confidence 87666
No 201
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.96 E-value=1.7e-09 Score=92.87 Aligned_cols=132 Identities=19% Similarity=0.098 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHhhhcCCCccch
Q 043735 89 LYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYKYRG 168 (336)
Q Consensus 89 ~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~r~ 168 (336)
..+....|.++.+++.||+|||+.+..+.++++++.++...+.+.....+.-+..-++..+.+.+++.|..|.+|.+.|+
T Consensus 390 tslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRa 469 (528)
T KOG0253|consen 390 TSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRA 469 (528)
T ss_pred HHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhh
Confidence 44566788999999999999999999999999999988887765444444444444445556778899999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCCC
Q 043735 169 ALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPDT 225 (336)
Q Consensus 169 ~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~ 225 (336)
.+.|.-.....+|+++.|+++ ...+. .-.....+.+...+++.+...++|-.
T Consensus 470 tgvGtcSsmaRIggI~~p~iA-~~~e~----s~sl~i~vy~~~~ilagIavcffPiE 521 (528)
T KOG0253|consen 470 TGVGTCSSMARIGGIFSPVIA-MRAEL----STSLPIFVYGALFILAGIAVCFFPIE 521 (528)
T ss_pred cchhhhhhHHhhhhhhhhHHH-HHhcc----ceeehHHHHHHHHHHHHHHheeeeec
Confidence 999999999999999999998 22221 12233334445555566666666543
No 202
>PRK10133 L-fucose transporter; Provisional
Probab=98.96 E-value=8.5e-08 Score=88.11 Aligned_cols=129 Identities=11% Similarity=-0.002 Sum_probs=101.6
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhH
Q 043735 75 CQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSV 154 (336)
Q Consensus 75 ~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~ 154 (336)
+|+++.+.++....+.++..++.++.|++.||+|||+++..+.++.++..++..+.++.+ ..+...+.|++.+..+|..
T Consensus 290 ~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~glg~~~i~P~~ 368 (438)
T PRK10133 290 PGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCSAFMSIQYPTI 368 (438)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHHHHHHH
Confidence 389999999999999999999999999999999999999988887777766665555533 2456778999999999999
Q ss_pred HHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCch-hHHHHhhhH
Q 043735 155 PLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWG-WRLSLGGAM 209 (336)
Q Consensus 155 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~-w~~~~~~~~ 209 (336)
.+...|..+++ .+.+.++..+ ..+|+.++|.+.+.+.+. .| -+..|++..
T Consensus 369 ~s~a~~~~~~~-~~~as~l~~~-~~~g~~~~~~i~G~l~~~---~g~~~~~~~v~~ 419 (438)
T PRK10133 369 FSLGIKNLGQD-TKYGSSFIVM-TIIGGGIVTPVMGFVSDA---AGNIPTAELIPA 419 (438)
T ss_pred HHHHHcccchh-hccchhHHhH-HhccchHHHHHHHHHHHh---ccchHHHHHHHH
Confidence 99999988764 4666666654 446788888888888774 33 566665433
No 203
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.95 E-value=1.5e-07 Score=81.12 Aligned_cols=142 Identities=20% Similarity=0.148 Sum_probs=112.9
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhh-chhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhH
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKF-GRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSV 154 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~ 154 (336)
|+|..+.|++.+...+.....++....+++|. ++|+......+++.++.+.+.+.+....+.- -++.|++.|..++.+
T Consensus 239 G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~la 317 (395)
T COG2807 239 GLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLA 317 (395)
T ss_pred CCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHhCccchHHHHH
Confidence 99999999999999999999999999999965 6788888888888888887777664333322 489999999999999
Q ss_pred HHHhhhcCCCccc-hhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhc
Q 043735 155 PLYLSEMAPYKYR-GALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSL 220 (336)
Q Consensus 155 ~~~~~~~~~~~~r-~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 220 (336)
...+.+-.+..++ +...++.+...-+=..++|.+.+++.+..+ +|+...+......+...+.-+
T Consensus 318 L~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~g--sw~~~~~~l~~~~i~m~i~Gl 382 (395)
T COG2807 318 LTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATG--SWSAPLVLLALATLLMLIFGL 382 (395)
T ss_pred HHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcC--ChHHHHHHHHHHHHHHHHHHh
Confidence 9999888766555 566667777777778889999999999876 788877766666555444433
No 204
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.95 E-value=2.9e-08 Score=88.17 Aligned_cols=111 Identities=25% Similarity=0.405 Sum_probs=96.7
Q ss_pred cCC-CchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhh---hHHHHHHHHHHHhhhhhhhh
Q 043735 76 QYN-SETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQ---GVWMLIVGRLLLGFGIGFAN 151 (336)
Q Consensus 76 ~~s-~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~---~~~~~~~~r~l~g~~~~~~~ 151 (336)
|.+ ..+.+.+.+...++..++.++.|++.||+|+|+..........+..+...... +.....+..++.|++.+...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 317 (352)
T PF07690_consen 238 GFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVF 317 (352)
T ss_dssp HCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 778 68889999999999999999999999999998888877777777776665433 45666777888999999999
Q ss_pred hhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHH
Q 043735 152 QSVPLYLSEMAPYKYRGALNIGFQLSITIGILIAN 186 (336)
Q Consensus 152 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 186 (336)
+....++.|..|+++||++.++.+...++|..++|
T Consensus 318 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 318 PILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999999887
No 205
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.92 E-value=6.8e-08 Score=87.48 Aligned_cols=113 Identities=15% Similarity=0.209 Sum_probs=77.5
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHH
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVP 155 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~ 155 (336)
|++..+.+.+.+...++..++.++.+++.||+|||+++..+.++..++.+...+.++.+.......+.+.+.+...+.
T Consensus 235 g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-- 312 (392)
T PRK10473 235 GFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSVGFGV-- 312 (392)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH--
Confidence 788888899999999999999999999999999999999999888888877776665554444444545444443333
Q ss_pred HHhhhcCCCccc-hhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 043735 156 LYLSEMAPYKYR-GALNIGFQLSITIGILIANVLNYFFAK 194 (336)
Q Consensus 156 ~~~~~~~~~~~r-~~~~~~~~~~~~~g~~~~~~l~~~~~~ 194 (336)
....+..|.++| +.+.+... ++..+++.+++++.+
T Consensus 313 ~~~~~~~~~~~~~g~~~~~~~----~~~~~g~~~~~~l~~ 348 (392)
T PRK10473 313 AMSQALGPFSLRAGVASSTLG----IAQVCGSSLWIWLAA 348 (392)
T ss_pred HHHHHhccCcccccHHHHHHH----HHHHHHHHHHHHHHH
Confidence 233445555555 34444444 444455555555554
No 206
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.89 E-value=3.1e-07 Score=87.63 Aligned_cols=145 Identities=17% Similarity=0.273 Sum_probs=114.1
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHhHHhhhh-hchhHHHHHHHHHHHHHHHHHHhhhh--------HHHHHHHHHHHhh
Q 043735 75 CQYNSETLTLFTSSLYLAALLSSLVASSVTRK-FGRKKSMLFGGVLFFAGALINGFAQG--------VWMLIVGRLLLGF 145 (336)
Q Consensus 75 ~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~~~~~~i~~~~~~~~~~--------~~~~~~~r~l~g~ 145 (336)
+|++.+.+..+...+.....+..+++|+++|+ +||++.+.++.++..++.++.++... ....+++-.+..+
T Consensus 18 lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~ 97 (654)
T TIGR00926 18 LGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIAL 97 (654)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHh
Confidence 37888888888888888888999999999995 69999999999999999877766421 1235566778888
Q ss_pred hhhhhhhhHHHHhhhcCCCcc---chhHHHHHHHHHHHHHHHHHHHHHHhhcccC----CchhHHHHhhhHHHHHHHHHh
Q 043735 146 GIGFANQSVPLYLSEMAPYKY---RGALNIGFQLSITIGILIANVLNYFFAKIKG----GWGWRLSLGGAMVPALIITIG 218 (336)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~---r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~----~~~w~~~~~~~~~~~~~~~~~ 218 (336)
|.|+.-+...+...|.+++++ |.....++..+.++|+.+++.+..++.+..+ ..+|...|.+.++..+++.+.
T Consensus 98 G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lv 177 (654)
T TIGR00926 98 GTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIV 177 (654)
T ss_pred hccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHH
Confidence 899999999999999997643 5677888999999999999999988874321 236888888777666555544
Q ss_pred h
Q 043735 219 S 219 (336)
Q Consensus 219 ~ 219 (336)
.
T Consensus 178 f 178 (654)
T TIGR00926 178 F 178 (654)
T ss_pred H
Confidence 3
No 207
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.88 E-value=2.5e-09 Score=88.66 Aligned_cols=123 Identities=16% Similarity=0.189 Sum_probs=100.2
Q ss_pred cccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhh-hchhHHHHHHHHHHHHHHHHHH---hhhhHHHHHHHHHHHhhhh
Q 043735 72 NQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRK-FGRKKSMLFGGVLFFAGALING---FAQGVWMLIVGRLLLGFGI 147 (336)
Q Consensus 72 ~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~~~~~~i~~~~~~---~~~~~~~~~~~r~l~g~~~ 147 (336)
+.+.+++.++..++.+++.....+-++++|++.|| +|-|.--++-++...++-++.+ ..+.+|.+.++||+.|+|.
T Consensus 71 k~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGg 150 (459)
T KOG4686|consen 71 KLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGG 150 (459)
T ss_pred hcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCc
Confidence 45557788888999999999999999999999995 6888766666666666665554 4678999999999999987
Q ss_pred hhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 043735 148 GFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAK 194 (336)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~ 194 (336)
-..-..-..+...|+..|+.+.++++......+|+.+--.+.+++.+
T Consensus 151 ESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~ 197 (459)
T KOG4686|consen 151 ESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYD 197 (459)
T ss_pred hhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHH
Confidence 66666667899999999999999999999999998876666666654
No 208
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.88 E-value=3e-08 Score=91.83 Aligned_cols=151 Identities=9% Similarity=0.010 Sum_probs=118.2
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhh----------hhHHHHHHHHHHH
Q 043735 74 YCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFA----------QGVWMLIVGRLLL 143 (336)
Q Consensus 74 ~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~----------~~~~~~~~~r~l~ 143 (336)
.+|+++.+.|.+.....++..++....+++.+|++.|+++.++.++.+++.+..... ++.+.+....++.
T Consensus 282 ~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~ 361 (468)
T TIGR00788 282 CLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIA 361 (468)
T ss_pred cCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHH
Confidence 459999999999999999999999999999999999999999999999887554211 3333455556788
Q ss_pred hhhhhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccC----CchhHHHHhh-hHHHHHHHHHh
Q 043735 144 GFGIGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKG----GWGWRLSLGG-AMVPALIITIG 218 (336)
Q Consensus 144 g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~----~~~w~~~~~~-~~~~~~~~~~~ 218 (336)
+++.+..+.....++.+..|++.+|...++.+...++|..+++.+++.+.+..+ +++.++..++ ..+..++....
T Consensus 362 ~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~~l~~ 441 (468)
T TIGR00788 362 EVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLLPLPL 441 (468)
T ss_pred HHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHH
Confidence 888888888889999999999999999999999999999999999998887543 2233333333 23333444444
Q ss_pred hcccCC
Q 043735 219 SLVLPD 224 (336)
Q Consensus 219 ~~~~~e 224 (336)
.+++|+
T Consensus 442 ~~llP~ 447 (468)
T TIGR00788 442 LHLLPR 447 (468)
T ss_pred HHhCCC
Confidence 457786
No 209
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.88 E-value=9.1e-08 Score=87.76 Aligned_cols=117 Identities=21% Similarity=0.321 Sum_probs=103.7
Q ss_pred chhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHhhhhhhhhhhHHHH
Q 043735 80 ETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQ--GVWMLIVGRLLLGFGIGFANQSVPLY 157 (336)
Q Consensus 80 ~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~--~~~~~~~~r~l~g~~~~~~~~~~~~~ 157 (336)
...+.+..+..++..++.+++++++||+|+|+.+..+.++.+++.++..+.+ +.+.+++..++.|++.+..+....++
T Consensus 260 ~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~ 339 (428)
T PF13347_consen 260 GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAM 339 (428)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccc
Confidence 5667888889999999999999999999999999999999999998888775 88999999999999999999999999
Q ss_pred hhhcCCCc-------cchhHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 043735 158 LSEMAPYK-------YRGALNIGFQLSITIGILIANVLNYFFAKIK 196 (336)
Q Consensus 158 ~~~~~~~~-------~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 196 (336)
++|..+.+ +.|...+..+....++..+++.+.+.+.+..
T Consensus 340 ~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~ 385 (428)
T PF13347_consen 340 LADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALV 385 (428)
T ss_pred cccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHh
Confidence 99998742 2388889999999999999999888887643
No 210
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.85 E-value=1.4e-07 Score=81.57 Aligned_cols=132 Identities=27% Similarity=0.408 Sum_probs=107.9
Q ss_pred chhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhh--HHHHHHHHHHHhhhhhhhhhhHHHH
Q 043735 80 ETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQG--VWMLIVGRLLLGFGIGFANQSVPLY 157 (336)
Q Consensus 80 ~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~--~~~~~~~r~l~g~~~~~~~~~~~~~ 157 (336)
...++..+...++..+++++.|.++||+|||+.+..+.....++.+...+..+ .+.+.+.|++.|++.+...+....+
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 118 (338)
T COG0477 39 LLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASAL 118 (338)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 46799999999999999999999999999998888887765566666666655 8889999999999999999999999
Q ss_pred hhhcCCC-ccchhHHHHHHH-HHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHH
Q 043735 158 LSEMAPY-KYRGALNIGFQL-SITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPA 212 (336)
Q Consensus 158 ~~~~~~~-~~r~~~~~~~~~-~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~ 212 (336)
+.|+.|+ ++|+...+.... ...+|..+++.+++.+... ...+|+..+.......
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 174 (338)
T COG0477 119 LSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA-LLWGWRAAFLLAALLG 174 (338)
T ss_pred HHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcchHHHHHHHHHHH
Confidence 9999997 678888888777 5778888888777776654 3457888666555444
No 211
>PRK11043 putative transporter; Provisional
Probab=98.83 E-value=2.3e-07 Score=84.30 Aligned_cols=118 Identities=14% Similarity=0.069 Sum_probs=91.5
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHH---Hh--hhhHHHHHHHHHHHhhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALIN---GF--AQGVWMLIVGRLLLGFGIGFA 150 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~---~~--~~~~~~~~~~r~l~g~~~~~~ 150 (336)
|++..+.++......++..++.+..+++.||+|+|+.+....+...++.+.. .. .++.+.+.+...+.|++.+..
T Consensus 234 g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (401)
T PRK11043 234 GYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAI 313 (401)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHH
Confidence 7888889988888888999999999999999999987766555554444322 11 234555556667788888888
Q ss_pred hhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 043735 151 NQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAK 194 (336)
Q Consensus 151 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~ 194 (336)
++.......|..| ++||++.++++.....++..++.+.+.+.+
T Consensus 314 ~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~ 356 (401)
T PRK11043 314 YPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALIS 356 (401)
T ss_pred HHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 8888887777776 579999999998888888888888887765
No 212
>PRK09669 putative symporter YagG; Provisional
Probab=98.80 E-value=5.2e-07 Score=83.16 Aligned_cols=115 Identities=19% Similarity=0.296 Sum_probs=90.0
Q ss_pred hHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHhhhhhhhhhhHHHHhh
Q 043735 82 LTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGF--AQGVWMLIVGRLLLGFGIGFANQSVPLYLS 159 (336)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~--~~~~~~~~~~r~l~g~~~~~~~~~~~~~~~ 159 (336)
.+.+.....+...++.+++++++||+|+|+.+..+.++.+++.+...+ .++.+.+++..++.|++.+...+...++++
T Consensus 266 ~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~a 345 (444)
T PRK09669 266 ATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFS 345 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556667788889999999999999999999887766654433322 346667777888999999999999999999
Q ss_pred hcCCCc-------cchhHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 043735 160 EMAPYK-------YRGALNIGFQLSITIGILIANVLNYFFAKIK 196 (336)
Q Consensus 160 ~~~~~~-------~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 196 (336)
|..+.+ ..|...+..+....+|..+++.+.+.+.+..
T Consensus 346 d~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~ 389 (444)
T PRK09669 346 DVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWV 389 (444)
T ss_pred hhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 988632 2266778888889999999999999887644
No 213
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.79 E-value=1.3e-06 Score=78.54 Aligned_cols=114 Identities=14% Similarity=0.218 Sum_probs=80.5
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHh----hhhHHHHHHHHHHHhhhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGF----AQGVWMLIVGRLLLGFGIGFAN 151 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~----~~~~~~~~~~r~l~g~~~~~~~ 151 (336)
|++..+.+++.+...++..++.++.|++.||+|||+++..+.++..+..+.... ..+.+.+.++..+.+.+.+...
T Consensus 226 g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (377)
T PRK11102 226 GVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMIS 305 (377)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhh
Confidence 788899999999999999999999999999999999998887765544332221 1234444444444454455555
Q ss_pred hhHHHHhhhcCCCccchhHHHHHHHH-HHHHHHHHHHHHH
Q 043735 152 QSVPLYLSEMAPYKYRGALNIGFQLS-ITIGILIANVLNY 190 (336)
Q Consensus 152 ~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~~~~~l~~ 190 (336)
......+.|..| ++|+++.++.+.. ..+|..+++.++.
T Consensus 306 ~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 306 SNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred HHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 555667777776 7889988876554 4466666665543
No 214
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.75 E-value=3.9e-07 Score=83.00 Aligned_cols=115 Identities=11% Similarity=-0.010 Sum_probs=90.3
Q ss_pred CCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHH
Q 043735 78 NSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVPLY 157 (336)
Q Consensus 78 s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~~~ 157 (336)
+....+...+....+..+|.++++++.||+++|+++.+..++..+..++..+.++... ...-.+.|++.+..+|....+
T Consensus 267 ~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~-~~~l~~~glf~s~~fp~i~sl 345 (410)
T TIGR00885 267 TAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVG-LYCLTLCSAFMSLMFPTIYGI 345 (410)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 3444455666677888999999999999999999999998888888888877766544 456778888899999999999
Q ss_pred hhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 043735 158 LSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKI 195 (336)
Q Consensus 158 ~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~ 195 (336)
..+..+++.+.....+. + ..+|+.+.|++.+.+.+.
T Consensus 346 ~~~~~g~~~~~~s~~l~-~-~~~Gga~~p~l~G~~~d~ 381 (410)
T TIGR00885 346 ALKGLGQDTKYGAAGLV-M-AIIGGGIVPPLQGFIIDM 381 (410)
T ss_pred HHhhhhhhhhhhHHHHH-H-HHhccchHHHHHHHHHHH
Confidence 99999876543333333 3 339999999999999984
No 215
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.72 E-value=1.2e-06 Score=79.25 Aligned_cols=121 Identities=21% Similarity=0.315 Sum_probs=100.2
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHhhhhhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQ--GVWMLIVGRLLLGFGIGFANQS 153 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~--~~~~~~~~r~l~g~~~~~~~~~ 153 (336)
|.++....+.......+.+++.+++.++.+|+|+|+++.++.++.+++.++..+.+ +.+.+++..++.+++.+...+.
T Consensus 268 g~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l 347 (467)
T COG2211 268 GDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPL 347 (467)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccc
Confidence 44555666777777778888899999999999999999999999999998887765 6788888889999999999999
Q ss_pred HHHHhhhcCCCc-----cc--hhHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 043735 154 VPLYLSEMAPYK-----YR--GALNIGFQLSITIGILIANVLNYFFAKIK 196 (336)
Q Consensus 154 ~~~~~~~~~~~~-----~r--~~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 196 (336)
.+++++|..+.. +| |...+......=+|..++..+.++.....
T Consensus 348 ~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~ 397 (467)
T COG2211 348 PWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAI 397 (467)
T ss_pred cHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999998876542 23 67777888888888888888888777644
No 216
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.69 E-value=1.5e-07 Score=86.34 Aligned_cols=166 Identities=16% Similarity=0.096 Sum_probs=105.9
Q ss_pred hccccccccchhhHHhhhccchhhhcccCCCCcccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhch--------hH
Q 043735 40 DIGISGGVTSMPSFLKRFFPSVYRKQQANSSTNQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGR--------KK 111 (336)
Q Consensus 40 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Gr--------r~ 111 (336)
+.+.+.....+|.|+++.+ |+|-.+.|++.++..+...+..+++|.++||.-+ ||
T Consensus 271 ~~~~~~l~~y~PtY~~~VL-----------------~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rk 333 (466)
T KOG2532|consen 271 NWGFYLLLTYLPTYLKEVL-----------------GFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRK 333 (466)
T ss_pred HHHHHHHHHHhhHHHHHHh-----------------CCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHH
Confidence 3444444567888988775 8999999999999999999999999999998855 22
Q ss_pred HH-HHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHhhhhhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHH
Q 043735 112 SM-LFGGVLFFAGALINGFAQG-VWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLN 189 (336)
Q Consensus 112 ~l-~~~~~~~~i~~~~~~~~~~-~~~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~ 189 (336)
++ .++....+++.+..++.++ .....+.-+....+..+..............+++-+..+++.+....+.++++|.+.
T Consensus 334 ifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~v 413 (466)
T KOG2532|consen 334 IFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLV 413 (466)
T ss_pred HHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHhe
Confidence 22 2334444444444455442 111111111112222221222222222221445568999999999999999999999
Q ss_pred HHhhcccCCchhHHHHhhhHHHHHHHHHhhccc
Q 043735 190 YFFAKIKGGWGWRLSLGGAMVPALIITIGSLVL 222 (336)
Q Consensus 190 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 222 (336)
+.+.+......|+++|++.+++.++..+.+.++
T Consensus 414 g~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 414 GIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred eeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 998852123579999998888766665554333
No 217
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.66 E-value=2.3e-06 Score=79.54 Aligned_cols=134 Identities=18% Similarity=0.203 Sum_probs=103.6
Q ss_pred hHHHHHHHHHHHHHHHHHhHHhhhhhch-----hHHH--HHHHHHHHHHHHHHHh---------hhhHHHHHHHHHHHhh
Q 043735 82 LTLFTSSLYLAALLSSLVASSVTRKFGR-----KKSM--LFGGVLFFAGALINGF---------AQGVWMLIVGRLLLGF 145 (336)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~g~l~dr~Gr-----r~~l--~~~~~~~~i~~~~~~~---------~~~~~~~~~~r~l~g~ 145 (336)
.+++.++..+...+.+++..++..|.+| +... .++.++.+++.+..++ ..++++++...++.++
T Consensus 314 ~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ 393 (475)
T TIGR00924 314 VIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTL 393 (475)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 6788888888888888876554444433 3433 6788888888776664 3588899999999999
Q ss_pred hhhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHh
Q 043735 146 GIGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIG 218 (336)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 218 (336)
|+....|....++++..|++.||+.++++.....+|..+++.+....... .+|...+...++..++..+.
T Consensus 394 ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 463 (475)
T TIGR00924 394 GELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVP---QGVTGVFGKIGLVTLLVGVV 463 (475)
T ss_pred HHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---cchhhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998888766542 35766666555554443333
No 218
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.65 E-value=1e-07 Score=85.27 Aligned_cols=105 Identities=17% Similarity=0.131 Sum_probs=79.1
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHh--hh--hHHHHHHHHHHHhhhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGF--AQ--GVWMLIVGRLLLGFGIGFAN 151 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~--~~--~~~~~~~~r~l~g~~~~~~~ 151 (336)
|.+..+.+++.+...++..++.+++|+++||+|||+.+..+..+...+..+..+ .+ +.+...+...+.+++.|...
T Consensus 257 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 336 (366)
T TIGR00886 257 GLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGN 336 (366)
T ss_pred CCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhcccc
Confidence 788889999999999999999999999999999998887777666666554443 22 45444445555555556556
Q ss_pred hhHHHHhhhcCCCccchhHHHHHHHHHHHH
Q 043735 152 QSVPLYLSEMAPYKYRGALNIGFQLSITIG 181 (336)
Q Consensus 152 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 181 (336)
+....++.|..| ++||...++.+...++|
T Consensus 337 ~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 337 GSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred chhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 666777888886 68999999888776654
No 219
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.62 E-value=2e-06 Score=80.74 Aligned_cols=141 Identities=18% Similarity=0.106 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhH-------------HHHHHHHHHHhhhhhh
Q 043735 83 TLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGV-------------WMLIVGRLLLGFGIGF 149 (336)
Q Consensus 83 ~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~-------------~~~~~~r~l~g~~~~~ 149 (336)
.+...+..+...++..++..+.||+|||+.++.+...+.++.++.+..... ..+...-+.......+
T Consensus 332 ~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g 411 (513)
T KOG0254|consen 332 FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIG 411 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcc
Confidence 566666667777888888999999999999999999999999877653211 1112222222222333
Q ss_pred hhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHH-HH-HhhcccCCCh
Q 043735 150 ANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALI-IT-IGSLVLPDTP 226 (336)
Q Consensus 150 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~-~~-~~~~~~~e~~ 226 (336)
..++.+.+.+|.+|.+.|+++.++......+...+.........+.. ++...|...+....+ .. ...+++||+.
T Consensus 412 ~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~---~~~~~f~~f~~~~~~~~~~fv~~~~pETk 487 (513)
T KOG0254|consen 412 WGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEAL---GIGGTFGYFGGICLLSLIIFVFFFVPETK 487 (513)
T ss_pred cccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhc---cccchHHHHHHHHHHHHHHHheEEcccCC
Confidence 45666678999999999999999877776666655444433333321 123344433333333 33 3557889986
No 220
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.60 E-value=1.3e-06 Score=76.44 Aligned_cols=133 Identities=14% Similarity=0.153 Sum_probs=107.4
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHH
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVP 155 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~ 155 (336)
|.+..+.+...+.+..+..+|.+.+.++..|+...|.+.+..++..+.++...+.++...+. .-++.|++.+..+|...
T Consensus 268 g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g~v~~~-~l~~ig~F~simfPTIf 346 (422)
T COG0738 268 GLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGGVVALY-ALFLIGLFNSIMFPTIF 346 (422)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcChHHHH-HHHHHHHHhHHHHHHHH
Confidence 78899999999999999999999999999999999999998888888888888888866554 46788999999999999
Q ss_pred HHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHH
Q 043735 156 LYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALI 214 (336)
Q Consensus 156 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~ 214 (336)
+...+..+++ ....+..-....+|+++.|.+.+++.+.. |-...+.....++.+
T Consensus 347 slal~~l~~~--ts~~s~~l~maivGGAiiP~l~G~i~d~~---g~~~~~~~~pllc~l 400 (422)
T COG0738 347 SLALKNLGEH--TSVGSGLLVMAIVGGAIIPPLQGVIADMF---GIQLTFLIVPLLCYL 400 (422)
T ss_pred HHHHhccCcc--ccccceeeeeheecchHHHHHHHHHHHhh---hhHHHHHHHHHHHHH
Confidence 9999999833 44445555567789999999999999854 455555433333333
No 221
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.59 E-value=1e-05 Score=73.29 Aligned_cols=118 Identities=20% Similarity=0.182 Sum_probs=89.7
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHH-HHHHHHHh--hhhHHHHHHHHHHHhhhhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFF-AGALINGF--AQGVWMLIVGRLLLGFGIGFANQ 152 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~-i~~~~~~~--~~~~~~~~~~r~l~g~~~~~~~~ 152 (336)
|.+..+.+++.....++..+++++.+++.||++++........... +....... ..+.+.+.+..++.|++.+...+
T Consensus 239 g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 318 (394)
T PRK11652 239 GLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFP 318 (394)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHH
Confidence 7788889999888889999999999999999985443322222222 22122222 23456677778899999999999
Q ss_pred hHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 043735 153 SVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAK 194 (336)
Q Consensus 153 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~ 194 (336)
....+..|..| ++++...++.+....+|..+++.+.+.+..
T Consensus 319 ~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~ 359 (394)
T PRK11652 319 LATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQ 359 (394)
T ss_pred HHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 99999999887 568999999999999999999999887754
No 222
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.58 E-value=1.2e-07 Score=84.03 Aligned_cols=135 Identities=15% Similarity=0.007 Sum_probs=101.1
Q ss_pred HHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhh----HHHHHHHHHHHhhh-hhhhhhhHHHHhhhcCCCccc
Q 043735 93 ALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQG----VWMLIVGRLLLGFG-IGFANQSVPLYLSEMAPYKYR 167 (336)
Q Consensus 93 ~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~----~~~~~~~r~l~g~~-~~~~~~~~~~~~~~~~~~~~r 167 (336)
+..|-.+...+.|++|||++.+.+.+++.+..+..+..-+ ...+++...+..+. .-+.......+.+|.+|.+.|
T Consensus 361 ~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR 440 (538)
T KOG0252|consen 361 TVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVR 440 (538)
T ss_pred cCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHh
Confidence 3446667788899999999999999999999988877544 12222222222221 112234445677899999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhcc--cCCchhHHHHhhhHHHHHHHHHhhcccCCChH
Q 043735 168 GALNIGFQLSITIGILIANVLNYFFAKI--KGGWGWRLSLGGAMVPALIITIGSLVLPDTPN 227 (336)
Q Consensus 168 ~~~~~~~~~~~~~g~~~~~~l~~~~~~~--~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~ 227 (336)
+...++....+-+|.+++.....++.+. ....+.++.+++.+...++..+..+++||+.+
T Consensus 441 ~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~ 502 (538)
T KOG0252|consen 441 STCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPETKG 502 (538)
T ss_pred hhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEeecccc
Confidence 9999999999999999999888877761 11246888999999988888888889999864
No 223
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.57 E-value=3.2e-07 Score=84.01 Aligned_cols=148 Identities=20% Similarity=0.191 Sum_probs=107.5
Q ss_pred cccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhc-----hhHHHHHHHHHHHHHHHHHHhh----hhHHHHHHHHHH
Q 043735 72 NQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFG-----RKKSMLFGGVLFFAGALINGFA----QGVWMLIVGRLL 142 (336)
Q Consensus 72 ~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~G-----rr~~l~~~~~~~~i~~~~~~~~----~~~~~~~~~r~l 142 (336)
++++|+++++...+.+...+...+ .++.|.++|-+- ||+-++++.++..++.+.++.. .+.....+.-++
T Consensus 17 ~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~l 95 (433)
T PF03092_consen 17 KDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFL 95 (433)
T ss_pred HHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHH
Confidence 344599999998888888777655 677889999763 5566666777776555555443 245666667788
Q ss_pred HhhhhhhhhhhHHHHhhhcCCC--ccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhc
Q 043735 143 LGFGIGFANQSVPLYLSEMAPY--KYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSL 220 (336)
Q Consensus 143 ~g~~~~~~~~~~~~~~~~~~~~--~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 220 (336)
..+|......++-+++.|...+ +.||...+.......+|++++..+.+.+.+. .+++..|.+.+....+..+..+
T Consensus 96 a~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~---~~~~~~f~i~~~~~~l~~~~~~ 172 (433)
T PF03092_consen 96 ASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDS---FGPQGVFLISAALPLLMLIVAL 172 (433)
T ss_pred HHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhc---CCCeEEehHHHHHHHHHHHHHH
Confidence 8889898899999999998733 3367778888888899999999999988874 4577777776666555544444
Q ss_pred ccC
Q 043735 221 VLP 223 (336)
Q Consensus 221 ~~~ 223 (336)
++.
T Consensus 173 ~~~ 175 (433)
T PF03092_consen 173 FLL 175 (433)
T ss_pred Hhh
Confidence 443
No 224
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.57 E-value=1.7e-06 Score=80.86 Aligned_cols=134 Identities=13% Similarity=0.056 Sum_probs=99.1
Q ss_pred hHHHHHHHHHHHHHHHHHh----HHhhhhhchhHHHHHHHHHHHHHHHHHHhhhh---------HHHHHHHHHHHhhhhh
Q 043735 82 LTLFTSSLYLAALLSSLVA----SSVTRKFGRKKSMLFGGVLFFAGALINGFAQG---------VWMLIVGRLLLGFGIG 148 (336)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~----g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~---------~~~~~~~r~l~g~~~~ 148 (336)
.+++.++..+...+..++. +++.||++.++.+.++.++.+++.+......+ .++++..+++.|+++.
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~ 397 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGEL 397 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHH
Confidence 5666777776666666655 66666666668889999999999888766654 4578889999999999
Q ss_pred hhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhc------ccC-CchhHHHHhhhHHHHHHH
Q 043735 149 FANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAK------IKG-GWGWRLSLGGAMVPALII 215 (336)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~------~~~-~~~w~~~~~~~~~~~~~~ 215 (336)
...|....++.+..|++.||+.++.+..+..+|..++..+...... ... ..+..+.|...++..++.
T Consensus 398 ~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 471 (500)
T PRK09584 398 MISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVI 471 (500)
T ss_pred HHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998888888887776653221 000 113556666555554433
No 225
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.54 E-value=8.7e-06 Score=71.90 Aligned_cols=227 Identities=15% Similarity=0.118 Sum_probs=133.9
Q ss_pred chhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHH-HHHHHHHHHHHHHhhhh---HHHHHHHHHHHhhhhhhhhhhHH
Q 043735 80 ETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLF-GGVLFFAGALINGFAQG---VWMLIVGRLLLGFGIGFANQSVP 155 (336)
Q Consensus 80 ~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~-~~~~~~i~~~~~~~~~~---~~~~~~~r~l~g~~~~~~~~~~~ 155 (336)
+..+...++..+..++-+++-|.++|+.|+||..+. ...+..++.....+.++ ++..++...+..++.........
T Consensus 58 a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyd 137 (438)
T COG2270 58 AYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYD 137 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehh
Confidence 445777888888889999999999999997765554 44444555555555543 44555566788888888888889
Q ss_pred HHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhccc---------------CCchhHHHHhhhHHHHHHHHHh-h
Q 043735 156 LYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIK---------------GGWGWRLSLGGAMVPALIITIG-S 219 (336)
Q Consensus 156 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~---------------~~~~w~~~~~~~~~~~~~~~~~-~ 219 (336)
+++.+..++++-++..+.-....-+|+.+.-+..-...-.. ....-|..+.+.++--++..+. .
T Consensus 138 s~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~ 217 (438)
T COG2270 138 SMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMI 217 (438)
T ss_pred hHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHH
Confidence 99999999887777766555455555544333221111000 1233565665555543333333 3
Q ss_pred cccCCChHHHHhcCChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhch
Q 043735 220 LVLPDTPNSMIERGQRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGI 299 (336)
Q Consensus 220 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (336)
+..++.++-. ..... . -...-++-+.+.+++.++. ....+++..+...-+.
T Consensus 218 ~~v~~~~~~~---~~~~~---~-------------------l~~g~k~L~~t~k~i~~~~----~i~~FLiA~~~~~DGv 268 (438)
T COG2270 218 LNVHDAEKIS---SPPPT---A-------------------LRNGFKELKSTFKEIRGRK----NLVLFLIARFFYIDGV 268 (438)
T ss_pred hccccccccc---ccchH---H-------------------HHHHHHHHHHHHHHHhccc----chHHHHHHHHHHHhhH
Confidence 3445443200 00000 0 0000011122333443333 3444555555555566
Q ss_pred hHHHHcHHHHHH-hcCCCCcHHHHHHHHHhHhhheec
Q 043735 300 NVIMFYAPVLFN-TIGFGNDASLMSAVITGLVNACAT 335 (336)
Q Consensus 300 ~~~~~~~~~~~~-~~G~s~~~~~~~~~~~~~~~~~~~ 335 (336)
+........+-. .+|+++.+..+.....++..++|+
T Consensus 269 ~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ 305 (438)
T COG2270 269 NTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGA 305 (438)
T ss_pred HHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHH
Confidence 777777777775 789999999888888888877765
No 226
>PRK11462 putative transporter; Provisional
Probab=98.53 E-value=1.6e-05 Score=73.54 Aligned_cols=115 Identities=15% Similarity=0.173 Sum_probs=79.7
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHhhhhhhhhhhHHHHh
Q 043735 81 TLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQ--GVWMLIVGRLLLGFGIGFANQSVPLYL 158 (336)
Q Consensus 81 ~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~--~~~~~~~~r~l~g~~~~~~~~~~~~~~ 158 (336)
..+.+.+...++..++.+++++++||+|+|+++..+..+.++..++..+.+ +...+.+.-++.|++.+...+....++
T Consensus 264 ~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ 343 (460)
T PRK11462 264 VFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMM 343 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345667778888899999999999999999988766554444343333322 233344455667887777777777788
Q ss_pred hhcCCCc-----cc--hhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 043735 159 SEMAPYK-----YR--GALNIGFQLSITIGILIANVLNYFFAKI 195 (336)
Q Consensus 159 ~~~~~~~-----~r--~~~~~~~~~~~~~g~~~~~~l~~~~~~~ 195 (336)
+|..+.+ +| |...+......-+|..+++.+.+.+...
T Consensus 344 ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~ 387 (460)
T PRK11462 344 SDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAY 387 (460)
T ss_pred HHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8777621 33 5556777778888888888888877654
No 227
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.45 E-value=1e-05 Score=62.52 Aligned_cols=116 Identities=22% Similarity=0.245 Sum_probs=95.6
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHH
Q 043735 77 YNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVPL 156 (336)
Q Consensus 77 ~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~~ 156 (336)
+++..--.-.++.+....+++++.+.+.+++|.|+.++++.+...+-.... +-++.+.++.+-.+.|++.+..++.-..
T Consensus 34 i~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ 112 (156)
T PF05978_consen 34 ISAGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGT 112 (156)
T ss_pred ccccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhH
Confidence 334444455777778888999999999999999999999999988665544 4567788889999999999999999999
Q ss_pred HhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 043735 157 YLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFA 193 (336)
Q Consensus 157 ~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~ 193 (336)
++.+..+++.|++..+++-.....+.++|.++...+.
T Consensus 113 ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 113 YLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred HHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999888888888888777665543
No 228
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.42 E-value=7.3e-07 Score=77.73 Aligned_cols=137 Identities=18% Similarity=0.104 Sum_probs=106.6
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhc--hhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFG--RKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQS 153 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~G--rr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~ 153 (336)
..+..+.|...--..+.+.++..+.|.++||++ |......+++..++++....+++++.++.+-++..+++.+.....
T Consensus 302 ~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~das 381 (464)
T KOG3764|consen 302 FTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADAS 381 (464)
T ss_pred cCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHH
Confidence 334447777777888999999999999999999 544445566666666677778899999999999999988887777
Q ss_pred HHHHhhhcCCCcc------chhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHH
Q 043735 154 VPLYLSEMAPYKY------RGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALII 215 (336)
Q Consensus 154 ~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~ 215 (336)
......++.+.++ -|...++...++.+|..+||.+++.+.+ ..|++|...+.++..+.-
T Consensus 382 l~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~---~iGF~wl~~iig~~n~iy 446 (464)
T KOG3764|consen 382 LIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVE---AIGFEWLMTIIGILNLIY 446 (464)
T ss_pred HhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchhee---ehhHHHHHHHHHHHHHHH
Confidence 7777776665543 3678899999999999999999999988 456777776666654433
No 229
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.38 E-value=1.2e-06 Score=79.31 Aligned_cols=141 Identities=16% Similarity=0.146 Sum_probs=118.7
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHH
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVP 155 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~ 155 (336)
+-.+.-.|.+......+-++.-++.+++.+|+|+-+++.+++.+..+=.+...+..|.|+.+-.-+++|+..+..+....
T Consensus 402 ~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~ 481 (618)
T KOG3762|consen 402 GGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAII 481 (618)
T ss_pred CCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHH
Confidence 44455567777777788888889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcCCCccchhHHHHHHH-HHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhh
Q 043735 156 LYLSEMAPYKYRGALNIGFQL-SITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGS 219 (336)
Q Consensus 156 ~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 219 (336)
+|++...|++.|..+-++.+. ..++|-.+|.++++.+.+. ++-|..|.+.++.+++..+..
T Consensus 482 sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~---fg~~ttf~~~giAcl~~l~~~ 543 (618)
T KOG3762|consen 482 SYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVER---FGARTTFRIFGIACLVTLALF 543 (618)
T ss_pred HHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhhee---ehhHHHHHHHHHHHHHHHHHH
Confidence 999999999999998886554 5778888888999888874 457777777666655554443
No 230
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.38 E-value=9.2e-06 Score=75.70 Aligned_cols=111 Identities=17% Similarity=0.248 Sum_probs=91.1
Q ss_pred hHHHHHHHHHHHHHHHHHhHHhhhhhchhHH-------HHHHHHHHHHHHHHHH-----hh-----hhHHHHHHHHHHHh
Q 043735 82 LTLFTSSLYLAALLSSLVASSVTRKFGRKKS-------MLFGGVLFFAGALING-----FA-----QGVWMLIVGRLLLG 144 (336)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~-------l~~~~~~~~i~~~~~~-----~~-----~~~~~~~~~r~l~g 144 (336)
..++.+...+...+.+++.+++.||+|||+. +.++.++.+++.+..+ .. .+.+.++...++.|
T Consensus 311 ~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g 390 (489)
T PRK10207 311 PVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQS 390 (489)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHH
Confidence 4566777777788889999999999999973 6677777776654321 11 24677778889999
Q ss_pred hhhhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHh
Q 043735 145 FGIGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFF 192 (336)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~ 192 (336)
+|++...+....++.+..|++.+|.+++++.....+|+.++..++...
T Consensus 391 ~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 391 LGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999998887655
No 231
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.35 E-value=8.8e-05 Score=65.66 Aligned_cols=146 Identities=16% Similarity=0.189 Sum_probs=118.6
Q ss_pred cccccCCCchhHHHHHHHHHHHHHHHHHhHHhhh-hhchhHHHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHhhhh
Q 043735 72 NQYCQYNSETLTLFTSSLYLAALLSSLVASSVTR-KFGRKKSMLFGGVLFFAGALINGF---AQGVWMLIVGRLLLGFGI 147 (336)
Q Consensus 72 ~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~d-r~Grr~~l~~~~~~~~i~~~~~~~---~~~~~~~~~~r~l~g~~~ 147 (336)
.+-||++..+...++.....|..+|-...|++.. |.++++.-.+++....++..+..+ ..+.+.+...-++.|++.
T Consensus 236 g~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~ 315 (403)
T PF03209_consen 236 GEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGN 315 (403)
T ss_pred hHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhh
Confidence 4457999999999999999999999999999877 778888888888888887755443 457788999999999999
Q ss_pred hhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhccc----C---CchhHHHHhhhHHHHHHHHH
Q 043735 148 GFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIK----G---GWGWRLSLGGAMVPALIITI 217 (336)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~----~---~~~w~~~~~~~~~~~~~~~~ 217 (336)
|.........+.+..++++-|..++.+.....++..++..+++.+.+.. + ..+|..+|.+.++..+.+..
T Consensus 316 G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ 392 (403)
T PF03209_consen 316 GLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALV 392 (403)
T ss_pred hHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999888899999999999999999999998887632 1 23566666655555444433
No 232
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.28 E-value=8.2e-05 Score=67.96 Aligned_cols=119 Identities=8% Similarity=0.130 Sum_probs=79.0
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHH-----hhhhHHHHHHHHHHHhhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALING-----FAQGVWMLIVGRLLLGFGIGFA 150 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~-----~~~~~~~~~~~r~l~g~~~~~~ 150 (336)
|.+..+.++.......+..+++.+.+.+.+|.++++.+.....+..++.++.. ..++++..++..++.++|.+..
T Consensus 250 g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~G~~~~ 329 (413)
T PRK15403 250 GMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTSLYAFGIGLI 329 (413)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHH
Confidence 88999999998888888899888888876555444443332233333332222 1233434567788888888888
Q ss_pred hhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 043735 151 NQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKI 195 (336)
Q Consensus 151 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~ 195 (336)
.+......-+ -....+|++.++++.....+...++...+++...
T Consensus 330 ~p~~~~~al~-~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~ 373 (413)
T PRK15403 330 FPTLFRFTLF-SNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN 373 (413)
T ss_pred hHHHHHHHhc-cCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 7777643321 1222478999988888888888888888887654
No 233
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.28 E-value=5.4e-09 Score=96.48 Aligned_cols=137 Identities=25% Similarity=0.197 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHH--h--h-hh----HHHHHHHHHHHhhhhh-hhhhhHHHH
Q 043735 88 SLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALING--F--A-QG----VWMLIVGRLLLGFGIG-FANQSVPLY 157 (336)
Q Consensus 88 ~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~--~--~-~~----~~~~~~~r~l~g~~~~-~~~~~~~~~ 157 (336)
...+...++.+....+.||+|||++++.+.++.+++.+..+ . . ++ -...++.-.+...+.+ ...+..+.+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~ 373 (451)
T PF00083_consen 294 ILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIY 373 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeeecccccccccccccccc
Confidence 34455566777778999999999999999999888887664 1 1 11 1111222222222222 334666688
Q ss_pred hhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHH-HHHHHHhhcccCCChH
Q 043735 158 LSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVP-ALIITIGSLVLPDTPN 227 (336)
Q Consensus 158 ~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~-~~~~~~~~~~~~e~~~ 227 (336)
..|.+|.+.|+++.++......+++.+++.+...+.+..+ ++ ..+.+.+.. .+...+..+++||+..
T Consensus 374 ~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~--~~-~~~~i~~~~~~i~~i~~~~~lpET~g 441 (451)
T PF00083_consen 374 TAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLG--GW-GVFLIFAGVCLIAIIFVYFFLPETKG 441 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccc--cc-ccchhhHHHHHHHHhheeEEEeeCCC
Confidence 8999999999999999999888888888887766665322 13 233333333 3334445578999863
No 234
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.22 E-value=5.1e-06 Score=56.55 Aligned_cols=65 Identities=17% Similarity=0.247 Sum_probs=58.8
Q ss_pred cccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHH
Q 043735 72 NQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWML 136 (336)
Q Consensus 72 ~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~ 136 (336)
.++.++|.++.+++.+.+++|+.+|.+....+.++..+++.+..+.+...+..+.+++.++.+.+
T Consensus 19 ~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w 83 (85)
T PF06779_consen 19 QADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLW 83 (85)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 34448999999999999999999999999999999888999999999999999999998877654
No 235
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.21 E-value=0.00032 Score=64.44 Aligned_cols=116 Identities=8% Similarity=0.118 Sum_probs=87.2
Q ss_pred CchhHHHHHHHHHHHHHH-HHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhh----h----------------------
Q 043735 79 SETLTLFTSSLYLAALLS-SLVASSVTRKFGRKKSMLFGGVLFFAGALINGFA----Q---------------------- 131 (336)
Q Consensus 79 ~~~~~~~~~~~~~~~~i~-~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~----~---------------------- 131 (336)
.+...++-+...+..++. .++.+++++|++|++++............+.++. +
T Consensus 42 ae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~ 121 (472)
T TIGR00769 42 AEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMG 121 (472)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHH
Confidence 357888888888877766 8899999999999999888776666666555432 0
Q ss_pred -----hHHHHHHHHHHHhhhhhhhhh-hHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 043735 132 -----GVWMLIVGRLLLGFGIGFANQ-SVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAK 194 (336)
Q Consensus 132 -----~~~~~~~~r~l~g~~~~~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~ 194 (336)
+.|...+......+-.....+ .-+.+++|.++.++-.|..+++..+.++|.++++.+..++.+
T Consensus 122 ~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 122 FIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122233333444444444454 778999999999998999999999999999999988888763
No 236
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.19 E-value=9e-05 Score=68.32 Aligned_cols=142 Identities=13% Similarity=0.059 Sum_probs=107.0
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhhhch-hHHHHHHHHHHHHHHHHHHhhhh---------------------HHHHHHHHH
Q 043735 84 LFTSSLYLAALLSSLVASSVTRKFGR-KKSMLFGGVLFFAGALINGFAQG---------------------VWMLIVGRL 141 (336)
Q Consensus 84 ~~~~~~~~~~~i~~~~~g~l~dr~Gr-r~~l~~~~~~~~i~~~~~~~~~~---------------------~~~~~~~r~ 141 (336)
+....+.+...+.+++..++.+|+|+ |++...+.++.+++.....+.++ .+..++...
T Consensus 309 ~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 388 (477)
T TIGR01301 309 FGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFA 388 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHH
Confidence 44455555556777888899999995 67778888888888776665432 266777788
Q ss_pred HHhhhhhhhhhhHHHHhhhcCCCc--cchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhh
Q 043735 142 LLGFGIGFANQSVPLYLSEMAPYK--YRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGS 219 (336)
Q Consensus 142 l~g~~~~~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 219 (336)
+.|+..+..+...++++++..+++ +.|..+|+++.+..+..++..+..+.+.+..++ +-.+.+.+.++..+++.+..
T Consensus 389 ~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~-~~~~~~~~~gv~~~~aa~~~ 467 (477)
T TIGR01301 389 ILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGG-GNLPAFVVGAVAAFVSGLLA 467 (477)
T ss_pred HhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCC-CCeeHHHHHHHHHHHHHHHH
Confidence 999999999999999999999954 449999999999999999999888876655442 34556777777766666655
Q ss_pred -cccCCCh
Q 043735 220 -LVLPDTP 226 (336)
Q Consensus 220 -~~~~e~~ 226 (336)
+.+|+++
T Consensus 468 ~~~~~~~~ 475 (477)
T TIGR01301 468 LILLPRPR 475 (477)
T ss_pred HHhCCCCC
Confidence 4567654
No 237
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.18 E-value=0.00013 Score=68.82 Aligned_cols=140 Identities=21% Similarity=0.196 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHH---HHHHHHHHHhhhhhhhhhhHHHHhhh
Q 043735 84 LFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVW---MLIVGRLLLGFGIGFANQSVPLYLSE 160 (336)
Q Consensus 84 ~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~---~~~~~r~l~g~~~~~~~~~~~~~~~~ 160 (336)
.................+.+.|++|||.....+..+..++.++.++..... ...+...+..++.+..+.....+.+|
T Consensus 354 ~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 433 (521)
T KOG0255|consen 354 LNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAE 433 (521)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333333345555566668999999999999999999999999888876433 34555555556666677777899999
Q ss_pred cCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHH-HHHhhcccCCChH
Q 043735 161 MAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALI-ITIGSLVLPDTPN 227 (336)
Q Consensus 161 ~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~-~~~~~~~~~e~~~ 227 (336)
.+|...|..+.+.......+|.+++|.+......... ..... +.+....+ ..+...++||+..
T Consensus 434 l~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~~~--~~~~~--~~~~~~~l~~~~~~~~lpet~~ 497 (521)
T KOG0255|consen 434 LIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQMFP--LLGLI--LFGWLALLLGLLSLLLLPETKG 497 (521)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc--cchHH--HHHHHHHHHHHHHHhcCcccCC
Confidence 9999999999999999999999999988866554211 12211 22333333 3344478899863
No 238
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.11 E-value=1e-05 Score=54.55 Aligned_cols=45 Identities=18% Similarity=0.397 Sum_probs=41.2
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHH
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLF 120 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~ 120 (336)
|+|..++|.+.++..+...++++++|.++||+||++.++....++
T Consensus 31 Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 31 GLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 999999999999999999999999999999999998887765543
No 239
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.08 E-value=3.4e-05 Score=71.29 Aligned_cols=129 Identities=11% Similarity=0.036 Sum_probs=81.7
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhh----hchhHHHHHHHHHHHHHH-HHHHhhhhHHHHHHHHHHHhhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRK----FGRKKSMLFGGVLFFAGA-LINGFAQGVWMLIVGRLLLGFGIGFA 150 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr----~Grr~~l~~~~~~~~i~~-~~~~~~~~~~~~~~~r~l~g~~~~~~ 150 (336)
|+|..+.+.+.+.+.++.+++.+++|+++|| ..+|..+.....+..+.. ......++.......-...+.+....
T Consensus 305 ~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~ 384 (495)
T KOG2533|consen 305 GYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLIAT 384 (495)
T ss_pred CcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHhHHHHhcchhhHHH
Confidence 6899999999999999999999999999999 677777776666665555 33333333333333333334445556
Q ss_pred hhhHHHHhhhcCCCccch-hHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHh
Q 043735 151 NQSVPLYLSEMAPYKYRG-ALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLG 206 (336)
Q Consensus 151 ~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~ 206 (336)
.+......++....+.|. ...+....+.+.++.++|.+-.... ...++|.+.|.
T Consensus 385 ~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~--ap~y~~~~~f~ 439 (495)
T KOG2533|consen 385 AIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLD--APRYGWGAVFY 439 (495)
T ss_pred HHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhccccc--CcchhhhhHHH
Confidence 666677777777665553 4444555555555555554332211 12356777773
No 240
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.99 E-value=0.00028 Score=66.44 Aligned_cols=110 Identities=18% Similarity=0.116 Sum_probs=82.6
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhhhhhch-hHHHHHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHhhhhhhhhhhHHHH
Q 043735 81 TLTLFTSSLYLAALLSSLVASSVTRKFGR-KKSMLFGGVLFFAGALINGF--AQGVWMLIVGRLLLGFGIGFANQSVPLY 157 (336)
Q Consensus 81 ~~~~~~~~~~~~~~i~~~~~g~l~dr~Gr-r~~l~~~~~~~~i~~~~~~~--~~~~~~~~~~r~l~g~~~~~~~~~~~~~ 157 (336)
..++......++..+++++.|.+..+++| |+.++++.+++.+++-+++. .+|....+..-++.|++.|.........
T Consensus 350 ~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~ 429 (599)
T PF06609_consen 350 EIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVI 429 (599)
T ss_pred eeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHe
Confidence 56788888899999999999999998887 45556676666654433333 2355566677889999988887777777
Q ss_pred hhhcCCCccchhHHHHHHHHHHHHHHHHHHHHH
Q 043735 158 LSEMAPYKYRGALNIGFQLSITIGILIANVLNY 190 (336)
Q Consensus 158 ~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~ 190 (336)
+.-..|.+.-|.+.++....-.+|+.++.-+-.
T Consensus 430 ~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~ 462 (599)
T PF06609_consen 430 AQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYN 462 (599)
T ss_pred eEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 777778888899999888888888877765543
No 241
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.96 E-value=0.0033 Score=57.15 Aligned_cols=243 Identities=10% Similarity=0.017 Sum_probs=117.0
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHH------hh--h----hHHHHHHHHHHHhhhhh--
Q 043735 83 TLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALING------FA--Q----GVWMLIVGRLLLGFGIG-- 148 (336)
Q Consensus 83 ~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~------~~--~----~~~~~~~~r~l~g~~~~-- 148 (336)
+...-.-.+..++.++..|.+.||..|.++...+.+..-++..... +. + +.+.......+.-+...
T Consensus 41 siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~ 120 (432)
T PF06963_consen 41 SIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIE 120 (432)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHH
Confidence 4444445566677888889999999999987776555443332221 11 1 11222222221111111
Q ss_pred hhhhhHH--HHhhhcC------CCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhc
Q 043735 149 FANQSVP--LYLSEMA------PYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSL 220 (336)
Q Consensus 149 ~~~~~~~--~~~~~~~------~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 220 (336)
-....+. +.=-||. +++.+.+.++...-.--+..+++|++.+.+... .+.+...++.+...++....-+
T Consensus 121 ~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~---~s~~~~~~~i~~~N~~S~~vEy 197 (432)
T PF06963_consen 121 RLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTF---ASPVIAAIFIAGWNLASVFVEY 197 (432)
T ss_pred HHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---cCHHHHHHHHHHHHHHHHHHHH
Confidence 1111111 1222332 334456777777777888999999999999874 3466555555555554444322
Q ss_pred -cc----CCChHHHHhcCChHHHHHHHHHHcCCCcchHHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHH
Q 043735 221 -VL----PDTPNSMIERGQRDEAREKLRKIRGVNDVDEEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQ 295 (336)
Q Consensus 221 -~~----~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (336)
++ ...|. +..+++.++.++..+.. ...+.+.+....+...+.-++....|+..++++-...-+-..++ ++..
T Consensus 198 ~~l~~VY~~~P~-L~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vflas~alalL-Y~TV 274 (432)
T PF06963_consen 198 FLLARVYNSVPA-LAVKKRSSESESSSDEE-SSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLASFALALL-YFTV 274 (432)
T ss_pred HHHHHHHHhChH-hcCCCCCcccccccccc-ccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHHHHHHHHHH-HHHH
Confidence 22 22221 11111111111000000 00011111111111111122224567666665533332222222 2212
Q ss_pred hhchhHHHHcHHHHHHhcCCCCcHHHHHHHHHhHhhheec
Q 043735 296 LTGINVIMFYAPVLFNTIGFGNDASLMSAVITGLVNACAT 335 (336)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~ 335 (336)
. ++......|+...|++....+..-....+.++.|+
T Consensus 275 L----sf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT 310 (432)
T PF06963_consen 275 L----SFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGT 310 (432)
T ss_pred h----cCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Confidence 2 23455666777779999998888777777776654
No 242
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=97.77 E-value=5.7e-05 Score=67.38 Aligned_cols=116 Identities=17% Similarity=0.303 Sum_probs=85.2
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhh----hchhHHHHHHHHH-HHHHHHHHHhhhhH-----------------
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRK----FGRKKSMLFGGVL-FFAGALINGFAQGV----------------- 133 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr----~Grr~~l~~~~~~-~~i~~~~~~~~~~~----------------- 133 (336)
|++....+.+-...-+...+.+++.|..+|| |||||.++....+ ..++.++..++.++
T Consensus 63 Gvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai 142 (498)
T KOG0637|consen 63 GVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAI 142 (498)
T ss_pred CCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHH
Confidence 7888888877777778888999999999995 8998877765444 44445555555432
Q ss_pred HHHHHHHHHHhhhhhhhhhhHHHHhhhcCCCccchh-HHHHHHHHHHHHHHHHHHHHHH
Q 043735 134 WMLIVGRLLLGFGIGFANQSVPLYLSEMAPYKYRGA-LNIGFQLSITIGILIANVLNYF 191 (336)
Q Consensus 134 ~~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~r~~-~~~~~~~~~~~g~~~~~~l~~~ 191 (336)
..++++..+.=+.....+..+-++..|.....++-+ +++++.....+|+.+|-.++++
T Consensus 143 ~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y 201 (498)
T KOG0637|consen 143 VLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSY 201 (498)
T ss_pred HHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeecccc
Confidence 233444444445566778888899999997776666 9999999999999888776653
No 243
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.74 E-value=0.00017 Score=62.97 Aligned_cols=124 Identities=19% Similarity=0.188 Sum_probs=110.4
Q ss_pred cccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhc--hhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhh
Q 043735 72 NQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFG--RKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGF 149 (336)
Q Consensus 72 ~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~G--rr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~ 149 (336)
++.+|+++.|.|-+.+...+.+.+.+....+..||.. -+-.+..++.++.-..+.....+....+.++-.+..+..+.
T Consensus 289 ~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~ 368 (451)
T KOG2615|consen 289 HGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTAS 368 (451)
T ss_pred cCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHH
Confidence 3556999999999999999999999999999999987 67777777777777777788888888899999999999898
Q ss_pred hhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 043735 150 ANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKI 195 (336)
Q Consensus 150 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~ 195 (336)
..+....++....|.++||..+|+......++-++||.+++.+..+
T Consensus 369 ~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~W 414 (451)
T KOG2615|consen 369 VVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSW 414 (451)
T ss_pred hhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEE
Confidence 9999999999999999999999999999999999999999887664
No 244
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.72 E-value=0.00092 Score=61.46 Aligned_cols=122 Identities=14% Similarity=0.199 Sum_probs=106.9
Q ss_pred cccccCCCchhHHHHHHHHHHHHHHHHHhH-HhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhh
Q 043735 72 NQYCQYNSETLTLFTSSLYLAALLSSLVAS-SVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFA 150 (336)
Q Consensus 72 ~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g-~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~ 150 (336)
+..++++.++.+.+.+.......+++.+.. .+...+|-|+++..|++.-.+..++.+++.+.|++.....+.++. ...
T Consensus 269 ~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~-~~~ 347 (463)
T KOG2816|consen 269 KAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALA-GIV 347 (463)
T ss_pred eeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhh-cch
Confidence 445699999999999999999999998877 777788999999999999999999999999999988888777774 556
Q ss_pred hhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 043735 151 NQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAK 194 (336)
Q Consensus 151 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~ 194 (336)
.+..-+.++.+.+++++|++.++....-.+...++|.+-+.+..
T Consensus 348 ~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 348 FPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred hHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 78888999999999999999999999999999999888776644
No 245
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.71 E-value=0.0042 Score=57.69 Aligned_cols=113 Identities=18% Similarity=0.193 Sum_probs=87.7
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhhhhhch--hH----H-HHHHHHHHHHHHHHHHhh---------hhHHHHHHHHHHHh
Q 043735 81 TLTLFTSSLYLAALLSSLVASSVTRKFGR--KK----S-MLFGGVLFFAGALINGFA---------QGVWMLIVGRLLLG 144 (336)
Q Consensus 81 ~~~~~~~~~~~~~~i~~~~~g~l~dr~Gr--r~----~-l~~~~~~~~i~~~~~~~~---------~~~~~~~~~r~l~g 144 (336)
..+|.+++..+.-.+.+++.+++=.|.+| |. . +.+++++.+++.+.+.+. .+.+++++..++++
T Consensus 309 p~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t 388 (493)
T PRK15462 309 PTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMG 388 (493)
T ss_pred CHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHH
Confidence 35788889998888888888888666633 21 1 667778878777655431 25677888899999
Q ss_pred hhhhhhhhhHHHHhhhcCCCccchhHHHHHHHH-HHHHHHHHHHHHHHhh
Q 043735 145 FGIGFANQSVPLYLSEMAPYKYRGALNIGFQLS-ITIGILIANVLNYFFA 193 (336)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~~~~~l~~~~~ 193 (336)
+|+-...|+..+++++..|+|.||..++.+... ..+|..++..+.....
T Consensus 389 ~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~~ 438 (493)
T PRK15462 389 FAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQTS 438 (493)
T ss_pred HHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999998774 3677777777666553
No 246
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.66 E-value=0.0031 Score=57.53 Aligned_cols=107 Identities=20% Similarity=0.224 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHhhhcCCCc
Q 043735 86 TSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYK 165 (336)
Q Consensus 86 ~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~ 165 (336)
.++.+....+++++.+.+.|+.|.|+.+.++........+...+.+ -+.+++.-.+.|+|.+..+..-..++.|..+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N-~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPN-SYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcc-hHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 8888899999999999999999999999999999888887666555 556778899999999998999899999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 043735 166 YRGALNIGFQLSITIGILIANVLNYFFA 193 (336)
Q Consensus 166 ~r~~~~~~~~~~~~~g~~~~~~l~~~~~ 193 (336)
.+.+..++.-.....+.++|..+...+.
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l~~~~ 162 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIILFIYF 162 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhheeee
Confidence 9999999888877777777766554443
No 247
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.52 E-value=0.0028 Score=56.74 Aligned_cols=136 Identities=18% Similarity=0.177 Sum_probs=95.0
Q ss_pred hHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHhhhc
Q 043735 82 LTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVPLYLSEM 161 (336)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~~~~~~~ 161 (336)
.+.+.-+..+...+..+.+.++.+|+.-+.-.....+++.++.++.+++++.+.-+++-.+.+++.|........+.+ .
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~ 139 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-F 139 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-h
Confidence 455666677788888888999999987665566677788888888899999988889999999998888777777654 4
Q ss_pred CCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhc-ccCC
Q 043735 162 APYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSL-VLPD 224 (336)
Q Consensus 162 ~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~-~~~e 224 (336)
+++ ...+.+..+.+.++++|+..-..+.. . ..+-|..+.....+.++..+..+ .+|.
T Consensus 140 y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~-g~s~~~tll~~~~lp~~~~~~~f~~L~~ 197 (402)
T PF02487_consen 140 YGK----SSLSAWSSGTGGAGLVGALYYLGLTT-L-GLSPRTTLLIMLVLPAIFLLSYFFLLPS 197 (402)
T ss_pred cCc----cccccccCCcChhhHHHHHHHHHHHH-h-CcCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 553 34567777777777777765555544 2 23456666655554444444334 3443
No 248
>PTZ00207 hypothetical protein; Provisional
Probab=97.47 E-value=0.0018 Score=61.33 Aligned_cols=134 Identities=13% Similarity=0.017 Sum_probs=94.8
Q ss_pred HHHHHHHHHHHHHHHhHHhhh---h------hchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHH
Q 043735 85 FTSSLYLAALLSSLVASSVTR---K------FGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVP 155 (336)
Q Consensus 85 ~~~~~~~~~~i~~~~~g~l~d---r------~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~ 155 (336)
++++..++..+|.+..|.+.. | +.|.-.+.+..+ +.++.++.++.-....+.+..++.|++.|..++...
T Consensus 396 ~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~ 474 (591)
T PTZ00207 396 LTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPKAALPLPYFIAAFANGFMAATIA 474 (591)
T ss_pred ehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHH
Confidence 678888888888888887762 1 222222333333 555555555543336899999999999999999999
Q ss_pred HHhhhcCCCccchhHHHHHHHHHHHHHHHH-HHHHHHhhcccC----------CchhHHHHhhhHHHHHHHHHhhc
Q 043735 156 LYLSEMAPYKYRGALNIGFQLSITIGILIA-NVLNYFFAKIKG----------GWGWRLSLGGAMVPALIITIGSL 220 (336)
Q Consensus 156 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~-~~l~~~~~~~~~----------~~~w~~~~~~~~~~~~~~~~~~~ 220 (336)
..++|+|- |+-|+-..+...+..+|..+- ..+.+.+.+... ..-++..|++.+.++++..+...
T Consensus 475 ~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~ 549 (591)
T PTZ00207 475 LVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITST 549 (591)
T ss_pred HHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHh
Confidence 99999999 888998888888888888775 466666654211 12367888877777776666553
No 249
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.47 E-value=0.0011 Score=59.57 Aligned_cols=107 Identities=21% Similarity=0.395 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhh---h------HHHHHHHHHHHhhhhhhhhhhHHHHhhhcCCCcc---chhHHHHHHHHH
Q 043735 111 KSMLFGGVLFFAGALINGFAQ---G------VWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYKY---RGALNIGFQLSI 178 (336)
Q Consensus 111 ~~l~~~~~~~~i~~~~~~~~~---~------~~~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~---r~~~~~~~~~~~ 178 (336)
|.+.++.++..++.++..++. . .+.++++..+.++|.|..-+...++.+|.+++++ |......+..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 456778888888887744332 2 2578888999999999999999999999998763 466777899999
Q ss_pred HHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhc
Q 043735 179 TIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSL 220 (336)
Q Consensus 179 ~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 220 (336)
++|..++..+.+++.+ +.||.+.|.+.++..+++.+..+
T Consensus 82 n~G~~~~~~~~~~i~~---~~~~~~~f~i~~~~~~~~~~~f~ 120 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQ---NYGWFLGFGIPAIGMLLALIVFL 120 (372)
T ss_dssp HHHHHHHHHCCCHHHH---CS-HHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhcccchhhcc---ccchhhhhhHHHHHHHHHHHHHH
Confidence 9999999999999887 46799999887766655555443
No 250
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=97.46 E-value=0.00046 Score=59.52 Aligned_cols=210 Identities=11% Similarity=0.090 Sum_probs=129.3
Q ss_pred HHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHhhhcCCCccchhHHH
Q 043735 93 ALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYKYRGALNI 172 (336)
Q Consensus 93 ~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 172 (336)
+.+.-++.=.+.|-.--|++++.-.+...++..+..+.++.+.+=+.-++.|...+. ..+.++++.+..+++++.++.+
T Consensus 55 YLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAa-EIAYysYIYs~Vd~~~Yqrvt~ 133 (433)
T KOG3810|consen 55 YLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAA-EIAYYSYIYSKVDPEMYKRVTG 133 (433)
T ss_pred HHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHHH-HHhhhheeeeecCHHHHHHHHH
Confidence 445555666789988889999999888889998999999998888888888987654 5666788899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHHHHHhhcccCCChHHHHhcCChHHHHHHHHHHcCCCcch
Q 043735 173 GFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPDTPNSMIERGQRDEAREKLRKIRGVNDVD 252 (336)
Q Consensus 173 ~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (336)
....+.-.|...+..++-.+..... .++...-.+......++.+..+++|..+|....+.++++.. ..+..+.+. .
T Consensus 134 y~RaA~L~g~~~g~vlaQlLvs~~~-~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~~~~~~~~--v~~~e~~~~-~ 209 (433)
T KOG3810|consen 134 YCRAAFLVGKFVGSVLAQLLVSLET-LSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFHRLEDKIS--VGDLEEMNP-Q 209 (433)
T ss_pred HhHHHHHHHhHHHhHHHHHHhhhcc-cchhhhchhhHHHHHHHHHHHhhCCCCchhhhhhcccccce--eccchhcCc-c
Confidence 8888888888877777766665321 33444444544444555566678887765443333222110 000000000 0
Q ss_pred HHHHHHHHHHHhccccccchhhhccccchhHHHHHHHHHHHHHhhchhHHHHcHHHHHHhc
Q 043735 253 EEFNDLVAASEASKQVEHPWGNLLKRKYRPHLTMAILIPFFQQLTGINVIMFYAPVLFNTI 313 (336)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (336)
.+..+.. +.....+.+-++....++......+.+....++++.+.+|...+-++.
T Consensus 210 ~~~~~~l------~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~ 264 (433)
T KOG3810|consen 210 ASYMSYL------RGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEV 264 (433)
T ss_pred chhhHHH------HHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhh
Confidence 0000000 000111111122223333455566667777778888888887777665
No 251
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.42 E-value=0.00069 Score=56.49 Aligned_cols=87 Identities=16% Similarity=0.248 Sum_probs=65.5
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHH
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVP 155 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~ 155 (336)
|....+++.+..+.+-...+...+.|-++||-|||+.-+.-++...+++ +.-.++++-.++++|.+-|+..+..++.--
T Consensus 68 gFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsC-iTKhSpqYkVLmVGR~LGGiaTsLLFSaFE 146 (454)
T KOG4332|consen 68 GFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSC-ITKHSPQYKVLMVGRVLGGIATSLLFSAFE 146 (454)
T ss_pred CccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHH-HhhcCCceEEEeehhhhhhHHHHHHHHHHH
Confidence 6778888888777777778888889999999999996554444444444 234467888999999999999888777666
Q ss_pred H-HhhhcCC
Q 043735 156 L-YLSEMAP 163 (336)
Q Consensus 156 ~-~~~~~~~ 163 (336)
+ +++|--.
T Consensus 147 sWliaEHne 155 (454)
T KOG4332|consen 147 SWLIAEHNE 155 (454)
T ss_pred HHHHHHhhh
Confidence 5 5566553
No 252
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.35 E-value=0.0028 Score=58.24 Aligned_cols=151 Identities=13% Similarity=0.141 Sum_probs=105.8
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhh----------hhHHHHHHHHHHHhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFA----------QGVWMLIVGRLLLGF 145 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~----------~~~~~~~~~r~l~g~ 145 (336)
|+|+...+.+..+..++..+|..+.....-++.-|+++.++.++.++..+.-... ++.+..+.--++..+
T Consensus 251 ~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~ 330 (433)
T PF03092_consen 251 HFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEV 330 (433)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHH
Confidence 4888888999988889999999999888888888999988888777766532211 122222333355555
Q ss_pred hhhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccC----Cc-hhHHHHhhhHHHHHHHHHhhc
Q 043735 146 GIGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKG----GW-GWRLSLGGAMVPALIITIGSL 220 (336)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~----~~-~w~~~~~~~~~~~~~~~~~~~ 220 (336)
..+..+-....+++|..|+..-|...++.....++|..++..++..+.+..+ ++ +-.+..++..+..++...+..
T Consensus 331 ~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~ 410 (433)
T PF03092_consen 331 IGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLF 410 (433)
T ss_pred HHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHH
Confidence 5566666667889999999999999999999999999999998888876433 11 122333444444444444455
Q ss_pred ccCCCh
Q 043735 221 VLPDTP 226 (336)
Q Consensus 221 ~~~e~~ 226 (336)
++|+..
T Consensus 411 lLp~~~ 416 (433)
T PF03092_consen 411 LLPPQK 416 (433)
T ss_pred HcCCCc
Confidence 677643
No 253
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=97.33 E-value=0.0048 Score=54.20 Aligned_cols=133 Identities=21% Similarity=0.279 Sum_probs=80.6
Q ss_pred HHHhhhccccccccchhhHHhhhccchhhhcccCCCCcccccCCCchhHHHHHHHHHHHHHHHHHhHHhhh-----hhch
Q 043735 35 LIFGYDIGISGGVTSMPSFLKRFFPSVYRKQQANSSTNQYCQYNSETLTLFTSSLYLAALLSSLVASSVTR-----KFGR 109 (336)
Q Consensus 35 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~d-----r~Gr 109 (336)
...|.-.+..+ .+|.+++.- |.|.++.+....++. -.--.+.|.++.| |+||
T Consensus 41 llQGiP~GL~~---~iP~lL~ak------------------~vSyt~~a~fS~ay~--P~sLKllWaPiVDs~y~k~~Gr 97 (510)
T KOG3574|consen 41 LLQGIPLGLIG---AIPLLLQAK------------------GVSYTSQAIFSFAYW--PFSLKLLWAPIVDSVYSKRFGR 97 (510)
T ss_pred HHcCCchhHhh---hhHHHhcCC------------------Ccchhhhhhhhhhhh--HHHHHHHHHhhhHHHHHHhhcc
Confidence 44555555543 567777643 566666554433221 1233578889999 9999
Q ss_pred hHHHHH-HHHHHHHHHHHHHh-----------hhhHHHHHHHHHHHhhhhhhhhhhHHHHhhhcCCCccchhHHHHHHHH
Q 043735 110 KKSMLF-GGVLFFAGALINGF-----------AQGVWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYKYRGALNIGFQLS 177 (336)
Q Consensus 110 r~~l~~-~~~~~~i~~~~~~~-----------~~~~~~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 177 (336)
||.-+. +..+.+..+...+. .++...+....++..+..+.--.+.-...-.+.++++-|.+......+
T Consensus 98 rksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg 177 (510)
T KOG3574|consen 98 RKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVG 177 (510)
T ss_pred ccceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHH
Confidence 984322 22222222222222 123333444556677766666666667777888888899999999888
Q ss_pred HHHHHHHHHHHHH
Q 043735 178 ITIGILIANVLNY 190 (336)
Q Consensus 178 ~~~g~~~~~~l~~ 190 (336)
.+.|.+++..+.-
T Consensus 178 ~~~GyfL~~~ifL 190 (510)
T KOG3574|consen 178 QTAGYFLGNVVFL 190 (510)
T ss_pred HhhhHHhhcceee
Confidence 8888888765543
No 254
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.07 E-value=0.0041 Score=55.78 Aligned_cols=150 Identities=17% Similarity=-0.005 Sum_probs=92.2
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhch-hHHHHHHHHHHHHHHHHHHhh----hhHHHHHHHHHHHhhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGR-KKSMLFGGVLFFAGALINGFA----QGVWMLIVGRLLLGFGIGFA 150 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Gr-r~~l~~~~~~~~i~~~~~~~~----~~~~~~~~~r~l~g~~~~~~ 150 (336)
|.+....|++.....++.++++.+.|.+.||... |.+.+.......++.+..... .+.+.++..-.+.|++....
T Consensus 297 gY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~ 376 (480)
T KOG2563|consen 297 GYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGY 376 (480)
T ss_pred cCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCC
Confidence 4555778999999999999999999999999865 555555555555553222221 12344555667778888888
Q ss_pred hhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHH-hhhHHHHHHHHHhhcccCCC
Q 043735 151 NQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSL-GGAMVPALIITIGSLVLPDT 225 (336)
Q Consensus 151 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~-~~~~~~~~~~~~~~~~~~e~ 225 (336)
.|...-+-.|..-|..=+...|..+....+-+.+-.++.+...+..+..+|.... +......++......++++.
T Consensus 377 ~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~ 452 (480)
T KOG2563|consen 377 LPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPD 452 (480)
T ss_pred CCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhh
Confidence 8888888888754443456667666666666666666666665533222343322 23333333334444455443
No 255
>PRK03612 spermidine synthase; Provisional
Probab=97.04 E-value=0.15 Score=47.94 Aligned_cols=116 Identities=17% Similarity=0.117 Sum_probs=67.4
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHH---HHHHHHHhhhh----H-HHHHHHHHHHhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFF---AGALINGFAQG----V-WMLIVGRLLLGFGI 147 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~---i~~~~~~~~~~----~-~~~~~~r~l~g~~~ 147 (336)
|-+....+.+.+++..|..+|+.+++++.++--|+. ......+.. ++..+...... . ..++...++.++..
T Consensus 46 G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~-~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~ 124 (521)
T PRK03612 46 GDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGF-VAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGLLI 124 (521)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 667777899999999999999999998874433332 222111111 11111111111 1 12233445667778
Q ss_pred hhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 043735 148 GFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFA 193 (336)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~ 193 (336)
|...|....+..+... ++-+...+-.+....+|+++|.++.+++.
T Consensus 125 G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vL 169 (521)
T PRK03612 125 GMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLL 169 (521)
T ss_pred HHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHH
Confidence 8888877766655332 12345566666677777777777766654
No 256
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.03 E-value=0.027 Score=51.37 Aligned_cols=115 Identities=18% Similarity=0.179 Sum_probs=85.8
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHh---hh-------hHHHHHHHHHHHhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGF---AQ-------GVWMLIVGRLLLGF 145 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~---~~-------~~~~~~~~r~l~g~ 145 (336)
|+++..+|..-+...+....+.+...++.+|+|..|.=.++......+..++.. .+ +...++.+-.+.-+
T Consensus 289 G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~ 368 (432)
T PF06963_consen 289 GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRI 368 (432)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999998887777766655544432 11 12223333333333
Q ss_pred hhhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHH
Q 043735 146 GIGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNY 190 (336)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~ 190 (336)
|.=..-....-++.|..|+++||...+.-+...++...+...+.-
T Consensus 369 GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~i 413 (432)
T PF06963_consen 369 GLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTI 413 (432)
T ss_pred HHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 333345566778899999999999999999888888887765544
No 257
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=96.90 E-value=0.019 Score=51.50 Aligned_cols=114 Identities=17% Similarity=0.147 Sum_probs=82.5
Q ss_pred CchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHH---HHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHH
Q 043735 79 SETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAG---ALINGFAQGVWMLIVGRLLLGFGIGFANQSVP 155 (336)
Q Consensus 79 ~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~---~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~ 155 (336)
+.+..+....+.+|-.++.--...+ |+-|-+++.+--++..+. ..+.-+.++.|.+++.-+..|+..|..+....
T Consensus 280 r~~Y~~Y~~~YQ~GVFISRSS~~~~--rir~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF 357 (402)
T PF02487_consen 280 RDQYRWYQLLYQLGVFISRSSLPFF--RIRRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTF 357 (402)
T ss_pred HHHHHHHHHHHHHHHhhhhcceeee--ehhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 5677888888888877775543322 342323222222222222 22333457888888899999999999999999
Q ss_pred HHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 043735 156 LYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAK 194 (336)
Q Consensus 156 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~ 194 (336)
..+.|-.++++|..+++....+-++|..++.+++..+.+
T Consensus 358 ~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le~ 396 (402)
T PF02487_consen 358 YRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLEP 396 (402)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988876654
No 258
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=96.58 E-value=0.13 Score=47.14 Aligned_cols=111 Identities=22% Similarity=0.251 Sum_probs=87.7
Q ss_pred chhHHHHHHHHHHHHHHHHHhHHhhhhhchh-------HHHHHHHHHHHHHHHHHHhh----------hhHHHHHHHHHH
Q 043735 80 ETLTLFTSSLYLAALLSSLVASSVTRKFGRK-------KSMLFGGVLFFAGALINGFA----------QGVWMLIVGRLL 142 (336)
Q Consensus 80 ~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr-------~~l~~~~~~~~i~~~~~~~~----------~~~~~~~~~r~l 142 (336)
-..++.++...+.-++.+++..++-.+.++| .=+-+++.+++.+.++.... .+.++++...++
T Consensus 324 vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l 403 (498)
T COG3104 324 VPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVL 403 (498)
T ss_pred cCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHH
Confidence 3457888999999999998888888885544 12455566666655544432 256888899999
Q ss_pred HhhhhhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHH
Q 043735 143 LGFGIGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNY 190 (336)
Q Consensus 143 ~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~ 190 (336)
+++|+=...|+..+++....|++-.+..++.+......|..++..+++
T Consensus 404 ~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~ 451 (498)
T COG3104 404 QSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAG 451 (498)
T ss_pred HHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecc
Confidence 999999999999999999999988899999999888888888877766
No 259
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=96.55 E-value=0.67 Score=43.22 Aligned_cols=117 Identities=15% Similarity=0.200 Sum_probs=80.5
Q ss_pred CCchhHHHHHHHHH-HHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhh---------hh---------------
Q 043735 78 NSETLTLFTSSLYL-AALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFA---------QG--------------- 132 (336)
Q Consensus 78 s~~~~~~~~~~~~~-~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~---------~~--------------- 132 (336)
+.+.+..+-....+ ...+......++++|++|++++-...........+.++. ++
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~ 135 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFK 135 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHH
Confidence 45666666665555 455667789999999999999887766666555544431 11
Q ss_pred -------HHHHHHHHHHHhhhhhhhhh-hHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 043735 133 -------VWMLIVGRLLLGFGIGFANQ-SVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAK 194 (336)
Q Consensus 133 -------~~~~~~~r~l~g~~~~~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~ 194 (336)
.|...+...+.-+-.....+ .-+.+.+|.++.++-.+..+++..+.++|.++++.+...+.+
T Consensus 136 ~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 136 GFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12222223333332233333 457889999999998999999999999999999988888776
No 260
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.47 E-value=0.43 Score=43.83 Aligned_cols=106 Identities=19% Similarity=0.326 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhh---hhchhHHHHHHHHHHHHHHHHHHhh------------------hhHHHHHHHHH
Q 043735 83 TLFTSSLYLAALLSSLVASSVTR---KFGRKKSMLFGGVLFFAGALINGFA------------------QGVWMLIVGRL 141 (336)
Q Consensus 83 ~~~~~~~~~~~~i~~~~~g~l~d---r~Grr~~l~~~~~~~~i~~~~~~~~------------------~~~~~~~~~r~ 141 (336)
+...-...++..++..+.+.+.+ |+||++.+..+..+..+..++.... +++....+.-+
T Consensus 282 ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~ 361 (461)
T KOG3098|consen 282 AIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGF 361 (461)
T ss_pred HHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHH
Confidence 34444445566666677777764 5789999988888888887666442 23456677778
Q ss_pred HHhhhhhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHH
Q 043735 142 LLGFGIGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLN 189 (336)
Q Consensus 142 l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~ 189 (336)
+.|++-+........++.+.+ +++|..+.+++-.-..++..++-+..
T Consensus 362 l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~ 408 (461)
T KOG3098|consen 362 LLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFS 408 (461)
T ss_pred HHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhh
Confidence 999999999999999999999 56688888877777777766654443
No 261
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=96.34 E-value=0.84 Score=41.97 Aligned_cols=118 Identities=12% Similarity=0.158 Sum_probs=85.6
Q ss_pred CCchhHHHHHHHHH-HHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhh---------hh---------------
Q 043735 78 NSETLTLFTSSLYL-AALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFA---------QG--------------- 132 (336)
Q Consensus 78 s~~~~~~~~~~~~~-~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~---------~~--------------- 132 (336)
+++.+.++-+...+ ++.+..++.+++.+++.|++++-..+.....+.+++++. ++
T Consensus 59 gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l 138 (509)
T COG3202 59 GAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFL 138 (509)
T ss_pred cchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccc
Confidence 45666777777777 778888999999999999999988777777777666542 11
Q ss_pred --------HHHHHHHHHHHhhhhhhhhh-hHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 043735 133 --------VWMLIVGRLLLGFGIGFANQ-SVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKI 195 (336)
Q Consensus 133 --------~~~~~~~r~l~g~~~~~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~ 195 (336)
.|...+...+.-+-.....+ .-+....|.++.++-.|..+.++.+.+++..++..+..++.+.
T Consensus 139 ~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 139 KWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred eeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 03333333333332222233 5567888999999889999999999999999999888888763
No 262
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=96.25 E-value=0.022 Score=51.42 Aligned_cols=120 Identities=13% Similarity=0.047 Sum_probs=69.7
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhch-------hHHHHHHHHHHHHHH---HHHHh--hhhHHHHHHHHHHH
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGR-------KKSMLFGGVLFFAGA---LINGF--AQGVWMLIVGRLLL 143 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Gr-------r~~l~~~~~~~~i~~---~~~~~--~~~~~~~~~~r~l~ 143 (336)
|.+..+..++..+...+..+|.+++|.++||+-| .+.=.+...+.+..+ +.+.. ..+...+....++.
T Consensus 279 ~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~ 358 (493)
T KOG1330|consen 279 GFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLV 358 (493)
T ss_pred CCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 3455566788888889999999999999999533 222222222222222 11111 11222222333444
Q ss_pred hhhh-hhhhhhHHHHhhhcCCCccchhHHHHHHHHH-HHHHHHHHHHHHHhhcc
Q 043735 144 GFGI-GFANQSVPLYLSEMAPYKYRGALNIGFQLSI-TIGILIANVLNYFFAKI 195 (336)
Q Consensus 144 g~~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~-~~g~~~~~~l~~~~~~~ 195 (336)
|... -........+..|..|+++|..+.++-.... .+|..-+|.+.+.+.+.
T Consensus 359 g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~ 412 (493)
T KOG1330|consen 359 GETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDK 412 (493)
T ss_pred HHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHH
Confidence 4432 2234455567889999999999999865554 44555556577777664
No 263
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=96.23 E-value=0.26 Score=46.90 Aligned_cols=140 Identities=15% Similarity=0.165 Sum_probs=102.3
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhh-chhHHHHHHHHHHHHHHHHHHhhhh----------------------
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKF-GRKKSMLFGGVLFFAGALINGFAQG---------------------- 132 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-Grr~~l~~~~~~~~i~~~~~~~~~~---------------------- 132 (336)
|.+...+.-..+.+.-......+.++.++|-| ||-+.+.++.++..++.++...+..
T Consensus 69 ~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s 148 (571)
T KOG1237|consen 69 HASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPS 148 (571)
T ss_pred ccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcc
Confidence 66667777788888888888889999999965 9999999998888888654433211
Q ss_pred ---HHHHHHHHHHHhhhhhhhhhhHHHHhhhcCC---Cccc---hhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHH
Q 043735 133 ---VWMLIVGRLLLGFGIGFANQSVPLYLSEMAP---YKYR---GALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRL 203 (336)
Q Consensus 133 ---~~~~~~~r~l~g~~~~~~~~~~~~~~~~~~~---~~~r---~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~ 203 (336)
...+....-+..+|.|+.-+.....-+|-++ ++++ ...+..+....++|..++..+..+..+ ..+|.+
T Consensus 149 ~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~---~~~w~l 225 (571)
T KOG1237|consen 149 KLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQD---NVGWKL 225 (571)
T ss_pred hHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhh---ccccee
Confidence 1345566667778889989999999999998 3222 356677888888898888877777765 356888
Q ss_pred HHhhhHHHHHHHHHh
Q 043735 204 SLGGAMVPALIITIG 218 (336)
Q Consensus 204 ~~~~~~~~~~~~~~~ 218 (336)
.|.+..+...+++++
T Consensus 226 gf~i~~~~~~lai~i 240 (571)
T KOG1237|consen 226 GFGIPTVLNALAILI 240 (571)
T ss_pred eccHHHHHHHHHHHH
Confidence 887666554444443
No 264
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.19 E-value=0.14 Score=46.98 Aligned_cols=135 Identities=13% Similarity=0.099 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHH-h----h---hhHHHHHHHHHHHhhhhhhhhhhHHHHhh
Q 043735 88 SLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALING-F----A---QGVWMLIVGRLLLGFGIGFANQSVPLYLS 159 (336)
Q Consensus 88 ~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~-~----~---~~~~~~~~~r~l~g~~~~~~~~~~~~~~~ 159 (336)
...+...+..+..-.+..|+..|.-+..++++..+..+... + . ..++..++.-++.|++.+..+.....+.+
T Consensus 53 ~~~v~~l~~~~~~~~~~~~i~~~~Ri~~~lv~~~~~~~~~~~l~~~~~~~~~~f~~~~~~v~~~g~~~~~~q~s~~gla~ 132 (437)
T TIGR00939 53 ASQLPSLLFNSLNLFLIFRIPVTVRLLGGLVILLVVVILVMVLVKVQTSETGFFVTTMASVVIINSGMALLQGSLFGLAG 132 (437)
T ss_pred HHHHHHHHHHHHHHHHhhccCccchhHHHHHHHHHHHHHHhheeeecCCcchHHHHHHHHHHHHHhhhhhhcccchhhcc
Confidence 33444444444445555556543333334333222222211 1 1 24566667778889988888888777766
Q ss_pred hcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccC-----CchhHHHHhhhHHHHHHHHHhhcccCCChH
Q 043735 160 EMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKG-----GWGWRLSLGGAMVPALIITIGSLVLPDTPN 227 (336)
Q Consensus 160 ~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~-----~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~ 227 (336)
.+|++.- ..+..+.+++++++.++--....... ..+-...|.+..++.+++++....+++.|-
T Consensus 133 -~fp~~~~----~a~~~G~g~aGv~~s~~~ii~~a~~~~~~~~~~~a~~YF~~a~~v~l~~i~~~~~l~k~~~ 200 (437)
T TIGR00939 133 -VFPSTYS----SAVMSGQGLAGVLTSLAMILVKASGNDSHGLKKSALGYFGTPCVVQLICIVCYLLLPKLPF 200 (437)
T ss_pred -cCCHHHH----HHHHhcchhHHHHHHHHHHHHHHhcCCccchhhhhhhHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 4665433 33444444444443333222111111 112223344444444555555555666553
No 265
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=95.61 E-value=0.11 Score=47.74 Aligned_cols=50 Identities=14% Similarity=0.048 Sum_probs=33.2
Q ss_pred HhhhhhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHh
Q 043735 143 LGFGIGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFF 192 (336)
Q Consensus 143 ~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~ 192 (336)
.-+-.+.--.+.-...-.+.+++.++.+......+.++|.+++..+.-.+
T Consensus 128 L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFlal 177 (544)
T PF13000_consen 128 LVFLCATQDIAVDGWALTMLSPENVGYASTCQTVGQTAGYFLSFTVFLAL 177 (544)
T ss_pred HHHHHccCCceeehhhhhhcChhhcchHHHHHHhHhhhhHHHHHHHHHhh
Confidence 33333333333445555667888899999999999999888876655444
No 266
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=95.61 E-value=1.6 Score=39.34 Aligned_cols=93 Identities=19% Similarity=0.120 Sum_probs=47.4
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHH
Q 043735 132 GVWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVP 211 (336)
Q Consensus 132 ~~~~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~ 211 (336)
.+...++...+.+++.|..+.......++ +|++.-...++..+.++.+-+.+--..-....+. ..+-...|.+..+.
T Consensus 116 ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~ytqavm~G~a~aG~l~Sl~~i~tka~~~~~--~~sA~~yF~~s~~~ 192 (406)
T KOG1479|consen 116 FFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEYTQAVMSGQALAGTLTSLLRILTKAAFSDS--RTSALIYFITSTVI 192 (406)
T ss_pred hHHHHHHHHHHHhhhhhhhccchhhhhhc-CCHHHHHHHHhcchhHhHHHHHHHHHHHHhcCCC--CceeehhHHHHHHH
Confidence 35566667778888888887777776666 5555444444433333333322221111111111 12333445555555
Q ss_pred HHHHHHhhcccCCChH
Q 043735 212 ALIITIGSLVLPDTPN 227 (336)
Q Consensus 212 ~~~~~~~~~~~~e~~~ 227 (336)
.++++++...+|+.|-
T Consensus 193 ~llC~i~y~~l~~lpf 208 (406)
T KOG1479|consen 193 LLLCFVLYLVLPKLPF 208 (406)
T ss_pred HHHHHHHHHHhhcchH
Confidence 5555555556666653
No 267
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=95.46 E-value=0.029 Score=51.67 Aligned_cols=57 Identities=14% Similarity=0.265 Sum_probs=45.5
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHH-HHHHHHHHHHHHHhh
Q 043735 74 YCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLF-GGVLFFAGALINGFA 130 (336)
Q Consensus 74 ~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~-~~~~~~i~~~~~~~~ 130 (336)
++|+++.+.|.++..--+..+++.+++|.++||+-+||.+++ ++++.....++..+.
T Consensus 40 QLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a~fll~fv 97 (618)
T KOG3762|consen 40 QLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTATFLLVFV 97 (618)
T ss_pred HcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHHHheeec
Confidence 349999999999999999999999999999999977665555 455555555655553
No 268
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=93.47 E-value=0.15 Score=49.30 Aligned_cols=51 Identities=25% Similarity=0.268 Sum_probs=41.0
Q ss_pred cCCCchhHHHHHHHHH-HHHHHHHHhHHhhhhhc--hhHHHHHHHHHHHHHHHH
Q 043735 76 QYNSETLTLFTSSLYL-AALLSSLVASSVTRKFG--RKKSMLFGGVLFFAGALI 126 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~-~~~i~~~~~g~l~dr~G--rr~~l~~~~~~~~i~~~~ 126 (336)
|++..+++++.+...+ +.+++.+++|+++||++ .|+.+.++.++..++.++
T Consensus 362 g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 362 GISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred CCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHH
Confidence 8999999999988776 67899999999999998 456777776666666543
No 269
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=93.19 E-value=0.11 Score=47.94 Aligned_cols=66 Identities=14% Similarity=0.202 Sum_probs=50.9
Q ss_pred HHHhhhhhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhH
Q 043735 141 LLLGFGIGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAM 209 (336)
Q Consensus 141 ~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~ 209 (336)
++.|++.-.......++-+|..-+++++...++++....++..++|++........ |.|+...+.+
T Consensus 396 ~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~---g~~~v~~~~~ 461 (488)
T KOG2325|consen 396 VVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLS---GPRPVWIILL 461 (488)
T ss_pred heeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhc---CccHHHHHHH
Confidence 55666666666677788899999999999999999999999999999888777643 3454444333
No 270
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=90.58 E-value=0.076 Score=50.20 Aligned_cols=65 Identities=22% Similarity=0.328 Sum_probs=0.0
Q ss_pred ccccccchhhHHhhhccchhhhcccCCCCcccccCCCchhHHHHHHHHH-HHHHHHHHhHHhhhhhc--hhHHHHHHHHH
Q 043735 43 ISGGVTSMPSFLKRFFPSVYRKQQANSSTNQYCQYNSETLTLFTSSLYL-AALLSSLVASSVTRKFG--RKKSMLFGGVL 119 (336)
Q Consensus 43 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~-~~~i~~~~~g~l~dr~G--rr~~l~~~~~~ 119 (336)
..+....+|+|++. +|++++++++++..+..+ +.++|.+++|++..|+. .|..+.+..+.
T Consensus 321 ~~G~~tF~pKylE~-----------------QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~ 383 (539)
T PF03137_consen 321 VSGFATFLPKYLES-----------------QFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVV 383 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHH-----------------HhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHH
Confidence 34555566777643 458999999998877776 77899999999999874 45555555444
Q ss_pred HHHHH
Q 043735 120 FFAGA 124 (336)
Q Consensus 120 ~~i~~ 124 (336)
..++.
T Consensus 384 ~~v~~ 388 (539)
T PF03137_consen 384 SIVSV 388 (539)
T ss_dssp -----
T ss_pred HHHHH
Confidence 44444
No 271
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=90.48 E-value=1.3 Score=38.38 Aligned_cols=116 Identities=16% Similarity=0.163 Sum_probs=78.2
Q ss_pred CchhHHHHHHHHHHHHHHHHHhHHhhhh-hchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHH
Q 043735 79 SETLTLFTSSLYLAALLSSLVASSVTRK-FGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVPLY 157 (336)
Q Consensus 79 ~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~~~ 157 (336)
++|.-|....+.+|-.+..--....-=+ .=--.++..-.++..+.-.+..+.++++...+.-+.-|+-.|..+....--
T Consensus 287 ~sqYRwyqvlYQlGVFiSRSS~~~~~~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~ 366 (409)
T KOG3880|consen 287 DSQYRWYQVLYQLGVFISRSSINLFTMPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHN 366 (409)
T ss_pred hhcchhhheeeeeeEEEEeccceEEechHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHH
Confidence 3457788888877654433222111001 000112233334444444566678899999999999999888888888877
Q ss_pred hhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 043735 158 LSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAK 194 (336)
Q Consensus 158 ~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~ 194 (336)
+.+-.++++|..+++...++-.+|..++.+++-.+.+
T Consensus 367 i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalplh~ 403 (409)
T KOG3880|consen 367 IHKETEPDVREFAMSAVSISDSIGIFLAGLLALPLHN 403 (409)
T ss_pred HhhcCCchHHHHhHhhheecchhhHHHHHHHhccchh
Confidence 7887888999999999999999999998888766543
No 272
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=90.24 E-value=12 Score=34.56 Aligned_cols=108 Identities=17% Similarity=0.180 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhhhhchh--HHHHH--HHHHHHHHHHHHHhh---------hhHHHHHHHHHHHhhhhhh
Q 043735 83 TLFTSSLYLAALLSSLVASSVTRKFGRK--KSMLF--GGVLFFAGALINGFA---------QGVWMLIVGRLLLGFGIGF 149 (336)
Q Consensus 83 ~~~~~~~~~~~~i~~~~~g~l~dr~Grr--~~l~~--~~~~~~i~~~~~~~~---------~~~~~~~~~r~l~g~~~~~ 149 (336)
-.+...+.++=.+|..+..+.. .-++| ++++. .-++.....++|... ++-+..++..++.|+..|-
T Consensus 310 ~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy 388 (437)
T TIGR00939 310 IICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGY 388 (437)
T ss_pred HHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhH
Confidence 3455556666666666443321 11222 33322 222333333444322 3456667779999999999
Q ss_pred hhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHH
Q 043735 150 ANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYF 191 (336)
Q Consensus 150 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~ 191 (336)
..+.+..+..+..++++|..+..+...+..+|..+|..++-.
T Consensus 389 ~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~ 430 (437)
T TIGR00939 389 LGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFL 430 (437)
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999888888888888888888766543
No 273
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=89.16 E-value=5.3 Score=36.31 Aligned_cols=95 Identities=11% Similarity=0.070 Sum_probs=70.7
Q ss_pred hHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHH--HHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHhh
Q 043735 82 LTLFTSSLYLAALLSSLVASSVTRKFGRKKSML--FGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVPLYLS 159 (336)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~--~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~~~~~ 159 (336)
-|.+.++..+.++++++..|++-.++.+..-+. ...++.+...++++..+++|..+++.++.+.......+.+..-++
T Consensus 287 NG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA 366 (412)
T PF01770_consen 287 NGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASFQIA 366 (412)
T ss_pred chHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 388899999999999999999977777754443 344555555677788889999999998888887777777777777
Q ss_pred hcCCCccchhHHHHHHH
Q 043735 160 EMAPYKYRGALNIGFQL 176 (336)
Q Consensus 160 ~~~~~~~r~~~~~~~~~ 176 (336)
.....+.-|...|+...
T Consensus 367 ~~l~~e~yaLVFGiNtf 383 (412)
T PF01770_consen 367 KNLSEERYALVFGINTF 383 (412)
T ss_pred HhccccceeeeeeeHHH
Confidence 76665555665555443
No 274
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=88.52 E-value=15 Score=33.30 Aligned_cols=106 Identities=16% Similarity=0.172 Sum_probs=68.1
Q ss_pred hHHHHHH-HHHHHHHHHHHhHHhhhhhchhHHHHHHHH-HHHHHHHH-HH------hhhhHHHHHHHHHHHhhhhhhhhh
Q 043735 82 LTLFTSS-LYLAALLSSLVASSVTRKFGRKKSMLFGGV-LFFAGALI-NG------FAQGVWMLIVGRLLLGFGIGFANQ 152 (336)
Q Consensus 82 ~~~~~~~-~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~-~~~i~~~~-~~------~~~~~~~~~~~r~l~g~~~~~~~~ 152 (336)
....... +.+.-.+|.+.+.++-++ +||...+...+ +..+..+. |- +..+-+.++....+.|+..|-..+
T Consensus 284 ~~~~~~l~fN~~d~vG~~~a~~~~~~-~~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYlts 362 (406)
T KOG1479|consen 284 ALLLVFLSFNVFDLIGSILAALLTWP-DPRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLTS 362 (406)
T ss_pred HHHHHHHHhHHHHHhhhhhhhcccCC-CCceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHhh
Confidence 3445555 778888887777776555 34443322211 12222222 21 234556777888999999998888
Q ss_pred hHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHH
Q 043735 153 SVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVL 188 (336)
Q Consensus 153 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l 188 (336)
....+..+-.|++++..+..+.......|-..|..+
T Consensus 363 l~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~ 398 (406)
T KOG1479|consen 363 LIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLL 398 (406)
T ss_pred heehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 888999999999888776666666666666655543
No 275
>PF12832 MFS_1_like: MFS_1 like family
Probab=87.75 E-value=1.1 Score=30.04 Aligned_cols=44 Identities=14% Similarity=0.334 Sum_probs=34.8
Q ss_pred HHHHhhchhHHHHcHHHHHHhcCCCCcHHHHHHHHHhHhhheec
Q 043735 292 FFQQLTGINVIMFYAPVLFNTIGFGNDASLMSAVITGLVNACAT 335 (336)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~ 335 (336)
.+..++....+.-|.|.++++.|++..+.+.+.++..+..++++
T Consensus 9 yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~ 52 (77)
T PF12832_consen 9 YFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAP 52 (77)
T ss_pred HHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 34444555667788999999999999999999999888777653
No 276
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=87.36 E-value=3.5 Score=38.35 Aligned_cols=95 Identities=11% Similarity=0.044 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhhhhchh--HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHhhh
Q 043735 83 TLFTSSLYLAALLSSLVASSVTRKFGRK--KSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVPLYLSE 160 (336)
Q Consensus 83 ~~~~~~~~~~~~i~~~~~g~l~dr~Grr--~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~~~~~~ 160 (336)
|.+.++..+..++.++..|++-.++.|- ..+.+..++.+...++++..+|+|..+++.++.+.......+.+..-++.
T Consensus 301 G~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y~flitia~~~iA~ 380 (511)
T TIGR00806 301 GAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIYQFLVPIATFQIAS 380 (511)
T ss_pred CHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6778888888889999999997777552 34444455556666777888999999999999999999999999888888
Q ss_pred cCCCccchhHHHHHHHH
Q 043735 161 MAPYKYRGALNIGFQLS 177 (336)
Q Consensus 161 ~~~~~~r~~~~~~~~~~ 177 (336)
....+.-|...|+.+..
T Consensus 381 ~L~~~~~aLvFGiNtfv 397 (511)
T TIGR00806 381 SLSKELCALVFGINTFV 397 (511)
T ss_pred HhcccceEEEEecHHHH
Confidence 88776667777766544
No 277
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=85.22 E-value=27 Score=31.11 Aligned_cols=85 Identities=16% Similarity=0.066 Sum_probs=58.3
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHH----HHH-Hh----hhhHHHHHHHHHHHhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGA----LIN-GF----AQGVWMLIVGRLLLGFG 146 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~----~~~-~~----~~~~~~~~~~r~l~g~~ 146 (336)
|-+--|.+.+.+.+..++.+|+...-++.|.--.-+.+..-+++..++. ++. .| .++.+.++++.++.|.-
T Consensus 39 G~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~L 118 (508)
T COG4262 39 GGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVL 118 (508)
T ss_pred CCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 4456677899999999999999999888775444333333333332221 111 22 24667888889999999
Q ss_pred hhhhhhhHHHHhhh
Q 043735 147 IGFANQSVPLYLSE 160 (336)
Q Consensus 147 ~~~~~~~~~~~~~~ 160 (336)
.|...|....+...
T Consensus 119 VG~EiPL~mrml~~ 132 (508)
T COG4262 119 VGAEIPLLMRMLQR 132 (508)
T ss_pred HhcchHHHHHHHHH
Confidence 99999998887766
No 278
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=84.34 E-value=5.3 Score=34.99 Aligned_cols=105 Identities=26% Similarity=0.310 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHhhhcCCC--c
Q 043735 88 SLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVPLYLSEMAPY--K 165 (336)
Q Consensus 88 ~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~--~ 165 (336)
..++..+.++++.+.+.+++|-|+.+.++.......-. .-+-+.+..++-.-...|++.+..+..--.|+++.-.. +
T Consensus 66 ~~y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA-~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~ 144 (390)
T KOG3097|consen 66 ALYLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIA-ANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYAN 144 (390)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH-hhcchhHHhhccHHHhhccccccccccCcceecHHHHHHHH
Confidence 44555667777777999999999998877666554332 22345677888888999999887765555554443211 1
Q ss_pred cc-------------hhHHHHHHHHHHHHHHHHHHHHHHhh
Q 043735 166 YR-------------GALNIGFQLSITIGILIANVLNYFFA 193 (336)
Q Consensus 166 ~r-------------~~~~~~~~~~~~~g~~~~~~l~~~~~ 193 (336)
.| |....+++...-.|..++..+.....
T Consensus 145 ~~~~q~~~~~~~~ffg~Ffii~~~~qv~gn~issli~~~~~ 185 (390)
T KOG3097|consen 145 QRGEQAGDGMKVRFFGEFFIIFQCAQVWGNLISSLIMTLFL 185 (390)
T ss_pred hhhhhccCceeeeehhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 22 44555666666666666665554443
No 279
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=83.19 E-value=6.2 Score=28.01 Aligned_cols=38 Identities=21% Similarity=0.185 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhhhh-chhHHHHHHHHHH
Q 043735 83 TLFTSSLYLAALLSSLVASSVTRKF-GRKKSMLFGGVLF 120 (336)
Q Consensus 83 ~~~~~~~~~~~~i~~~~~g~l~dr~-Grr~~l~~~~~~~ 120 (336)
+.-.+.-+++..+.....||+.||| |-+++.++..++.
T Consensus 45 a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lll 83 (116)
T COG5336 45 AFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLL 83 (116)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 4556667777778888889999997 5566554444333
No 280
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=81.42 E-value=1.2 Score=40.67 Aligned_cols=115 Identities=16% Similarity=0.023 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHhhhc-
Q 043735 83 TLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVPLYLSEM- 161 (336)
Q Consensus 83 ~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~~~~~~~- 161 (336)
.|-..++.+...+.+...-++.||+|-|+++..+.....++..+.+..++.+.....+-..|+-.+....+.+..+++.
T Consensus 335 ~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~ 414 (498)
T KOG0637|consen 335 CLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALALYA 414 (498)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHHHHH
Confidence 4667777888889999999999999966666666665666666666666666666667666654444433333333221
Q ss_pred --------------------CCCccc--hhHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 043735 162 --------------------APYKYR--GALNIGFQLSITIGILIANVLNYFFAKIKG 197 (336)
Q Consensus 162 --------------------~~~~~r--~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~ 197 (336)
.....| |...++.+....+..++..+..+.+.+..+
T Consensus 415 ~~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G 472 (498)
T KOG0637|consen 415 ILGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFG 472 (498)
T ss_pred HhCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcC
Confidence 112222 555566776666666666555555555443
No 281
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=78.59 E-value=7.4 Score=34.52 Aligned_cols=95 Identities=12% Similarity=0.086 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhhhhchhH--HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHhhh
Q 043735 83 TLFTSSLYLAALLSSLVASSVTRKFGRKK--SMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVPLYLSE 160 (336)
Q Consensus 83 ~~~~~~~~~~~~i~~~~~g~l~dr~Grr~--~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~~~~~~ 160 (336)
|..-++..+.++++.+..|.+--++.|+. .+..+.+..+...+++....++|..+++..+.........+.+..-+++
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~ 353 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIAR 353 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHH
Confidence 66777788888999999999987777653 4444555556666777778899999998888888888888888888888
Q ss_pred cCCCccchhHHHHHHHH
Q 043735 161 MAPYKYRGALNIGFQLS 177 (336)
Q Consensus 161 ~~~~~~r~~~~~~~~~~ 177 (336)
..+.+.-|...|+....
T Consensus 354 nL~~e~~gLvFGiNTFv 370 (433)
T KOG3810|consen 354 NLSSELFGLVFGINTFV 370 (433)
T ss_pred hhhhhhheeeeehHHHH
Confidence 88777667766665443
No 282
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=78.53 E-value=40 Score=28.59 Aligned_cols=102 Identities=16% Similarity=0.168 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhh-hhchhHHHH----HHHHHHHHHHHHHH-hhh----hHHHHHHHHHHHhhhhhhhhh
Q 043735 83 TLFTSSLYLAALLSSLVASSVTR-KFGRKKSML----FGGVLFFAGALING-FAQ----GVWMLIVGRLLLGFGIGFANQ 152 (336)
Q Consensus 83 ~~~~~~~~~~~~i~~~~~g~l~d-r~Grr~~l~----~~~~~~~i~~~~~~-~~~----~~~~~~~~r~l~g~~~~~~~~ 152 (336)
....-++..+..+|.+..|+... ++.||+.+. .+.+++.+..++.. ... +...+++.-++.|++.=+.++
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 45556666677788788888877 456666544 33444444444321 111 345677777788876555555
Q ss_pred hHHHHhhhcCCCccchhHHHHHHHHHHHHHHHH
Q 043735 153 SVPLYLSEMAPYKYRGALNIGFQLSITIGILIA 185 (336)
Q Consensus 153 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 185 (336)
+.--+-.|. +...+-+..-.+...+++|..+-
T Consensus 224 ViL~lPhEy-K~~~pk~ig~~Fg~iWGfGY~~y 255 (267)
T PF07672_consen 224 VILNLPHEY-KGYNPKKIGIQFGLIWGFGYIFY 255 (267)
T ss_pred HHhcChhhh-cCCCcceehhHHHHHHHHHHHHH
Confidence 555444453 22233333345555566665543
No 283
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=75.84 E-value=70 Score=29.94 Aligned_cols=73 Identities=14% Similarity=0.081 Sum_probs=47.5
Q ss_pred HHHHHhhhhhhhhhhHHHHhhhcCCCc-cchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHHHHH
Q 043735 139 GRLLLGFGIGFANQSVPLYLSEMAPYK-YRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVPALI 214 (336)
Q Consensus 139 ~r~l~g~~~~~~~~~~~~~~~~~~~~~-~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~ 214 (336)
.-++.|+.....+..--..+.|.+|.+ +|...++-+....++..++..++.+.+.+ ..||.....+.-+..++
T Consensus 272 ~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~---~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 272 LVIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIR---KYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhhHHHHHHHHHHHHHH
Confidence 345566666666666667777887653 46777787777777777666666666666 46798776655444333
No 284
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=75.71 E-value=2.7 Score=36.49 Aligned_cols=135 Identities=16% Similarity=0.069 Sum_probs=77.0
Q ss_pred hHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHhhhc
Q 043735 82 LTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFANQSVPLYLSEM 161 (336)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~~~~~~~~~~~~ 161 (336)
.|.+.-+-.+-..+..+.+..+.||+---.-..+..++.+.+.++.+++++.++-+++..+..++.|.....-..+.+.
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~- 142 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSR- 142 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhcc-
Confidence 3555566667778888888899998643333344566777777888889988888888888888777665544443333
Q ss_pred CCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHH-HHHHHHhhccc
Q 043735 162 APYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVP-ALIITIGSLVL 222 (336)
Q Consensus 162 ~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~-~~~~~~~~~~~ 222 (336)
+++.. .+.+..+.+.++++|..-=.++.+.. +..-|...++...+ .+.++..++.+
T Consensus 143 Y~~~~----i~~WSSGTGgAGliGa~SYa~lT~~~-~~spk~Tlli~l~lP~lfa~~yf~lL 199 (409)
T KOG3880|consen 143 YPSIV----IAGWSSGTGGAGLIGASSYAFLTSWA-NLSPKSTLLIMLFLPALFAFAYFFLL 199 (409)
T ss_pred CCCce----eccccCCCCcchhhhhhHHHHHhhhc-CCChhhHHHHHHHHHHHHHHHHHhee
Confidence 33222 23333333344444443333333322 13445555554444 44444333333
No 285
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=74.22 E-value=28 Score=26.79 Aligned_cols=80 Identities=16% Similarity=0.110 Sum_probs=45.9
Q ss_pred HhhhhhchhHHHHHHHHHHHHHH-H-HHHh--------hhhHHHHHHHHHHHhhhhhhhhhhHHHHhhhcCCCccchhHH
Q 043735 102 SVTRKFGRKKSMLFGGVLFFAGA-L-INGF--------AQGVWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYKYRGALN 171 (336)
Q Consensus 102 ~l~dr~Grr~~l~~~~~~~~i~~-~-~~~~--------~~~~~~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~ 171 (336)
.++||+-||-.+..+.-...... + +..+ .+++..+++...+.|+|. ..+.+.+++-.+++++-|...
T Consensus 56 ~Vs~RM~rRm~~~~GiP~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~gl---lGisYGilSaSWD~~r~GSll 132 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVGIPTALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGLGL---LGISYGILSASWDPEREGSLL 132 (153)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHHH---HhhhhhhcccccCCCCCCCcc
Confidence 46778777765554432221111 1 1111 134445555555555543 335566677778888889999
Q ss_pred HHHHHHHHHHHHH
Q 043735 172 IGFQLSITIGILI 184 (336)
Q Consensus 172 ~~~~~~~~~g~~~ 184 (336)
|+-..-.+++.+.
T Consensus 133 G~~e~~~N~~r~~ 145 (153)
T PF11947_consen 133 GWEEFKRNWGRMW 145 (153)
T ss_pred cHHHHHHhHHHHH
Confidence 9888888877654
No 286
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=73.67 E-value=42 Score=28.91 Aligned_cols=99 Identities=19% Similarity=0.185 Sum_probs=66.3
Q ss_pred hHHHHHHHHHHHHHHHHHhHHhhhhhchh--HHHHHHHHHHHHHHHHHHh----hh---hHHHHHHHHHHHhhhhhhhhh
Q 043735 82 LTLFTSSLYLAALLSSLVASSVTRKFGRK--KSMLFGGVLFFAGALINGF----AQ---GVWMLIVGRLLLGFGIGFANQ 152 (336)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~g~l~dr~Grr--~~l~~~~~~~~i~~~~~~~----~~---~~~~~~~~r~l~g~~~~~~~~ 152 (336)
-|.+.+.+.++.++|+-+..++..|-..| ..+.+..+..+....+... ++ +...-.++..+.-.+.|..+|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 47888889999999999888887765443 3344444333333322211 11 223335556666778888999
Q ss_pred hHHHHhhhcCCCccchhHHHHHHHHHHH
Q 043735 153 SVPLYLSEMAPYKYRGALNIGFQLSITI 180 (336)
Q Consensus 153 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 180 (336)
...-+=.+..|++.|+..+.++..-.++
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLni 391 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNI 391 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhH
Confidence 9999999999999998887776654443
No 287
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=73.58 E-value=1.1 Score=39.25 Aligned_cols=25 Identities=32% Similarity=0.327 Sum_probs=0.0
Q ss_pred HHHhhhhhhhhhhHHHHhhhcCCCcc
Q 043735 141 LLLGFGIGFANQSVPLYLSEMAPYKY 166 (336)
Q Consensus 141 ~l~g~~~~~~~~~~~~~~~~~~~~~~ 166 (336)
++.|++.+..+.....+.+. +|++.
T Consensus 5 ~~~~~~~~~~q~s~~glas~-~p~~y 29 (309)
T PF01733_consen 5 ALIGFANAVLQSSLFGLASL-FPPKY 29 (309)
T ss_dssp --------------------------
T ss_pred EEEHhhhHHHhccHHHHHhc-CCHHH
Confidence 45666777777777776665 55544
No 288
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=73.44 E-value=3 Score=35.15 Aligned_cols=56 Identities=20% Similarity=0.159 Sum_probs=32.1
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHhhc--ccCCchhHHHHhhhHHHHHHHHHhhc
Q 043735 165 KYRGALNIGFQLSITIGILIANVLNYFFAK--IKGGWGWRLSLGGAMVPALIITIGSL 220 (336)
Q Consensus 165 ~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~--~~~~~~w~~~~~~~~~~~~~~~~~~~ 220 (336)
|+|+........+.++|.++.........+ ......|++.+.+.+++..+-.+.+.
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ 59 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYI 59 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556777777777788887775433222101 11123699888777766554444443
No 289
>PF11085 YqhR: Conserved membrane protein YqhR; InterPro: IPR024563 This family of proteins is conserved in the Bacillaceae family of the Firmicutes. Their function is not known.
Probab=72.85 E-value=43 Score=26.19 Aligned_cols=71 Identities=15% Similarity=0.290 Sum_probs=43.5
Q ss_pred CchhHHHHHHHHH--HHHHHHHHhHHhhhhh-chhHHHHHHHHHHHHHHHHHH-hh-----------hhHHHHHHHHHHH
Q 043735 79 SETLTLFTSSLYL--AALLSSLVASSVTRKF-GRKKSMLFGGVLFFAGALING-FA-----------QGVWMLIVGRLLL 143 (336)
Q Consensus 79 ~~~~~~~~~~~~~--~~~i~~~~~g~l~dr~-Grr~~l~~~~~~~~i~~~~~~-~~-----------~~~~~~~~~r~l~ 143 (336)
.+..|.+.++..+ ...+++++.-.+-.|+ |.-+=++.|.+++++...+.. +. +++..-+...++.
T Consensus 65 ~t~~G~~igi~~~gv~Si~aAllY~~~l~k~~g~W~Gi~YG~~~W~ivF~~lnP~fp~~~~~~~l~~nTiiT~~CiyiLy 144 (173)
T PF11085_consen 65 NTWLGNLIGIVFIGVFSIVAALLYYALLKKFKGPWPGILYGLAWWAIVFFVLNPIFPMIKPVTELDWNTIITTLCIYILY 144 (173)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhcccccCChhhhhCchhHHHHHHHHHHHH
Confidence 4555666555544 3355666655555554 667778888888888776552 11 2344455566788
Q ss_pred hhhhhh
Q 043735 144 GFGIGF 149 (336)
Q Consensus 144 g~~~~~ 149 (336)
|++.|-
T Consensus 145 GlFIGY 150 (173)
T PF11085_consen 145 GLFIGY 150 (173)
T ss_pred HHHhce
Confidence 887664
No 290
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=71.61 E-value=9.1 Score=37.50 Aligned_cols=66 Identities=20% Similarity=0.285 Sum_probs=45.8
Q ss_pred cccccchhhHHhhhccchhhhcccCCCCcccccCCCchhHHHHHHHHH-HHHHHHHHhHHhhhhh--chhHHHHHHHHHH
Q 043735 44 SGGVTSMPSFLKRFFPSVYRKQQANSSTNQYCQYNSETLTLFTSSLYL-AALLSSLVASSVTRKF--GRKKSMLFGGVLF 120 (336)
Q Consensus 44 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~-~~~i~~~~~g~l~dr~--Grr~~l~~~~~~~ 120 (336)
.+....+|+|++.. ||.+.+.+..+++...+ +.++|.+++|++..|+ ..|....+.++..
T Consensus 409 ~G~~tFlPKyLE~Q-----------------fg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~ 471 (735)
T KOG3626|consen 409 TGYITFLPKYLETQ-----------------FGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCS 471 (735)
T ss_pred hhHHHhhHHHHHHH-----------------cCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHH
Confidence 44455678887653 39999999988866655 6688889999999976 4566655555555
Q ss_pred HHHHHH
Q 043735 121 FAGALI 126 (336)
Q Consensus 121 ~i~~~~ 126 (336)
.++.+.
T Consensus 472 ~l~l~~ 477 (735)
T KOG3626|consen 472 VLSLLF 477 (735)
T ss_pred HHHHHH
Confidence 554443
No 291
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=70.16 E-value=1.7 Score=37.98 Aligned_cols=106 Identities=17% Similarity=0.207 Sum_probs=3.7
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhh-hchhHHHHH--HHHHHHHHHHHHHh----------hhhHHHHHHHHHHHhhhhhhh
Q 043735 84 LFTSSLYLAALLSSLVASSVTRK-FGRKKSMLF--GGVLFFAGALINGF----------AQGVWMLIVGRLLLGFGIGFA 150 (336)
Q Consensus 84 ~~~~~~~~~~~i~~~~~g~l~dr-~Grr~~l~~--~~~~~~i~~~~~~~----------~~~~~~~~~~r~l~g~~~~~~ 150 (336)
.+...+.++-.+|....++.--+ ..+|++... .-++.....++|.. .++-+..++..++.|+..|-.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 34566777888888877664211 134444332 12222222223311 234456677788999999999
Q ss_pred hhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHH
Q 043735 151 NQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLN 189 (336)
Q Consensus 151 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~ 189 (336)
.+....+..+..++++|..+..+......+|-.+|..++
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp -HHHH----------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998888888877777777776554
No 292
>KOG3312 consensus Predicted membrane protein [Function unknown]
Probab=63.61 E-value=18 Score=27.31 Aligned_cols=31 Identities=19% Similarity=0.162 Sum_probs=14.4
Q ss_pred hcccCCChHHHHhcCChHHHHHHHHHHcCCC
Q 043735 219 SLVLPDTPNSMIERGQRDEAREKLRKIRGVN 249 (336)
Q Consensus 219 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (336)
|..++++.++...+.+.+...+.+++...++
T Consensus 27 WvlvYRt~~Yk~LKa~vdK~sKKLE~~K~~~ 57 (186)
T KOG3312|consen 27 WVLVYRTDKYKRLKAEVDKQSKKLEKKKEEN 57 (186)
T ss_pred EEEEEehhHHHHHHHHHHHHHHHHHHHhhhc
Confidence 3445666555444444444444444444333
No 293
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=62.78 E-value=59 Score=24.93 Aligned_cols=26 Identities=19% Similarity=0.359 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHhHHhhhhhchhH
Q 043735 86 TSSLYLAALLSSLVASSVTRKFGRKK 111 (336)
Q Consensus 86 ~~~~~~~~~i~~~~~g~l~dr~Grr~ 111 (336)
+.-+.+++.+...+.|++.+|..+++
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHhccccc
Confidence 34466788899999999999988764
No 294
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=62.07 E-value=16 Score=30.16 Aligned_cols=99 Identities=10% Similarity=0.063 Sum_probs=61.3
Q ss_pred CcccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhh
Q 043735 71 TNQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGFGIGFA 150 (336)
Q Consensus 71 ~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~~~~~~ 150 (336)
+.+.||+|..+.--+.+.+.+|..+|.++.+.++.-+ ..+ ++-.-.+.-.-.|+|.|..
T Consensus 130 I~ekYGldSpEgrGVl~~Yi~GTvfGtiffsllas~~-------------------a~~--~~fhP~ALAMasGvGSgSM 188 (241)
T PF11299_consen 130 ISEKYGLDSPEGRGVLGVYIIGTVFGTIFFSLLASLL-------------------ASL--GIFHPYALAMASGVGSGSM 188 (241)
T ss_pred eehhcCCCCccccceEEEeeehhhHHHHHHHHHHHHH-------------------Hhc--cCCCHHHHHHHcCCcHHHH
Confidence 5566777777777777777777777777766554211 111 1011123445578999999
Q ss_pred hhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHH
Q 043735 151 NQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYF 191 (336)
Q Consensus 151 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~ 191 (336)
+..+..-+.+.+|. ......++....+-+.+..|-.+.-+
T Consensus 189 MaAa~~aL~~~~P~-~a~~i~A~AaaSNllt~~~G~Y~~if 228 (241)
T PF11299_consen 189 MAAASGALAAAYPE-MADQILAFAAASNLLTSVTGLYMSIF 228 (241)
T ss_pred HHHHHHHHHHHCcc-hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888898974 44556666666555555555544433
No 295
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=61.57 E-value=1.5e+02 Score=28.04 Aligned_cols=71 Identities=17% Similarity=0.150 Sum_probs=43.1
Q ss_pred HHHHHHhhhhhhhhhhHHHHhhhcCCCcc-chhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHhhhHHH
Q 043735 138 VGRLLLGFGIGFANQSVPLYLSEMAPYKY-RGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLSLGGAMVP 211 (336)
Q Consensus 138 ~~r~l~g~~~~~~~~~~~~~~~~~~~~~~-r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~ 211 (336)
+.-+..|+........--..+.+.+|.++ +...++-++...++-..+..++++.+.+ ..||+....+.-+.
T Consensus 287 ~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir---~~GW~~~AlitPiv 358 (491)
T PF03219_consen 287 LLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIR---RFGWRTAALITPIV 358 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhhHHHHHHHhHHH
Confidence 33345556555555555566777776543 4566666666666655555566666666 46798776654433
No 296
>PRK10263 DNA translocase FtsK; Provisional
Probab=61.39 E-value=1.7e+02 Score=31.16 Aligned_cols=20 Identities=20% Similarity=0.285 Sum_probs=10.6
Q ss_pred HHHHHHHHHHhHHhhhhhch
Q 043735 90 YLAALLSSLVASSVTRKFGR 109 (336)
Q Consensus 90 ~~~~~i~~~~~g~l~dr~Gr 109 (336)
..++.+|..+...+..-+|-
T Consensus 62 Nl~GiVGA~LAD~L~~LFGl 81 (1355)
T PRK10263 62 NLGGMPGAWLADTLFFIFGV 81 (1355)
T ss_pred cccchHHHHHHHHHHHHHhH
Confidence 44555555555555555553
No 297
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=61.03 E-value=34 Score=24.67 Aligned_cols=45 Identities=22% Similarity=0.373 Sum_probs=32.3
Q ss_pred chhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHH
Q 043735 80 ETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGA 124 (336)
Q Consensus 80 ~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~ 124 (336)
...+.......++..++....+.+.|..|.+..+........++.
T Consensus 87 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (141)
T TIGR00880 87 VALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAF 131 (141)
T ss_pred HHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHH
Confidence 345667777788888888899999988887776666555444443
No 298
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=59.85 E-value=93 Score=25.25 Aligned_cols=42 Identities=17% Similarity=0.043 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHHHHhHHhh---hhhchhHHHHHHHHHHHHHH
Q 043735 83 TLFTSSLYLAALLSSLVASSVT---RKFGRKKSMLFGGVLFFAGA 124 (336)
Q Consensus 83 ~~~~~~~~~~~~i~~~~~g~l~---dr~Grr~~l~~~~~~~~i~~ 124 (336)
........+++.+|...++.+. ++..+|+.....+++..+..
T Consensus 49 ~~~~~~~i~~F~~G~~~~~~i~~~~~~~~~~~~~~~~l~~~~~ll 93 (209)
T PF06912_consen 49 ALRYLLAILSFILGAFLAGLIVRRSRRRRRRRWYRILLLLEAILL 93 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHH
Confidence 3344555566777777777772 23344444444444444443
No 299
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=57.49 E-value=76 Score=29.89 Aligned_cols=46 Identities=11% Similarity=0.098 Sum_probs=34.9
Q ss_pred HHHHHHHhhhhhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHH
Q 043735 137 IVGRLLLGFGIGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGI 182 (336)
Q Consensus 137 ~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 182 (336)
++...+..+.....+....+.-+.+.+|..=|+.+.+.+...++|+
T Consensus 409 I~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGG 454 (544)
T PF13000_consen 409 IIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGG 454 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCC
Confidence 3344566666666677777888899999888899998888888774
No 300
>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family. To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.
Probab=56.43 E-value=37 Score=27.30 Aligned_cols=12 Identities=17% Similarity=0.368 Sum_probs=7.0
Q ss_pred hHHhhhhhchhH
Q 043735 100 ASSVTRKFGRKK 111 (336)
Q Consensus 100 ~g~l~dr~Grr~ 111 (336)
.+...||+||+-
T Consensus 155 i~~~leryg~~l 166 (191)
T PF03596_consen 155 IAEFLERYGRWL 166 (191)
T ss_pred HHHHHHHhcccH
Confidence 355566777653
No 301
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=55.93 E-value=29 Score=24.73 Aligned_cols=50 Identities=12% Similarity=0.087 Sum_probs=39.3
Q ss_pred chhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHh
Q 043735 80 ETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGF 129 (336)
Q Consensus 80 ~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~ 129 (336)
+..|-..+++.-.+.+.++.+++..|+.-+-+.=.++..++.++..+..+
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEe
Confidence 55678888899999999999999999987777666677776666655443
No 302
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=52.22 E-value=73 Score=25.48 Aligned_cols=24 Identities=8% Similarity=0.308 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHhHHhhhhhch
Q 043735 86 TSSLYLAALLSSLVASSVTRKFGR 109 (336)
Q Consensus 86 ~~~~~~~~~i~~~~~g~l~dr~Gr 109 (336)
+.-+.+++.++..+.|++.||.-+
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhc
Confidence 344678889999999999999875
No 303
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=51.89 E-value=53 Score=31.59 Aligned_cols=65 Identities=18% Similarity=0.234 Sum_probs=55.3
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 043735 132 GVWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAKIK 196 (336)
Q Consensus 132 ~~~~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 196 (336)
+..+++--.++.|++.........-...+-+|++-|+.+.+++....++|..+...+........
T Consensus 457 Si~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~~t 521 (571)
T KOG1237|consen 457 SILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQFST 521 (571)
T ss_pred eHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34566666789999999888888888999999999999999999999999999988887766544
No 304
>PRK02237 hypothetical protein; Provisional
Probab=51.14 E-value=50 Score=23.63 Aligned_cols=50 Identities=10% Similarity=0.032 Sum_probs=38.4
Q ss_pred chhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHh
Q 043735 80 ETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGF 129 (336)
Q Consensus 80 ~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~ 129 (336)
+..|-+.+++.-.+.+.++.+++..|+.-+-+.=.++..++.++..+..+
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 44688888999999999999999999987766666666666666654433
No 305
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=49.57 E-value=68 Score=27.18 Aligned_cols=17 Identities=12% Similarity=-0.130 Sum_probs=8.2
Q ss_pred hhhHHHHHHHHHhhccc
Q 043735 206 GGAMVPALIITIGSLVL 222 (336)
Q Consensus 206 ~~~~~~~~~~~~~~~~~ 222 (336)
+++.++.++...+..++
T Consensus 119 ~~G~~l~~~~~~~f~fi 135 (254)
T PF07857_consen 119 YIGVALVLVSGIIFSFI 135 (254)
T ss_pred HHHHHHHHHHHHheeee
Confidence 34444445555554454
No 306
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=48.71 E-value=1.2e+02 Score=29.82 Aligned_cols=60 Identities=22% Similarity=0.218 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHhhhhhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHh
Q 043735 133 VWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFF 192 (336)
Q Consensus 133 ~~~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~ 192 (336)
.++.+.-.++.+.+.........-...+-.|++.|....+++....++|..+...+..+-
T Consensus 565 ~~wq~pq~~~~~~~e~~~~~~~~e~~~~~~p~~mks~~~a~~~~~~~~g~~~~~~~~~~~ 624 (654)
T TIGR00926 565 ILWQIPQYVILTAGEVLFSVTGLEFSYSQAPPNMKSVLQALWLLTVAIGNLIVVVIAEFE 624 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 344455567777777777666677777788999999999999999999988877666443
No 307
>PRK11469 hypothetical protein; Provisional
Probab=42.59 E-value=1.8e+02 Score=23.37 Aligned_cols=32 Identities=28% Similarity=0.308 Sum_probs=21.1
Q ss_pred HHHHHHhHHhhhhhchhHHHHHHHHHHHHHHH
Q 043735 94 LLSSLVASSVTRKFGRKKSMLFGGVLFFAGAL 125 (336)
Q Consensus 94 ~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~ 125 (336)
..|..++.++.+++|||.-++-+.++..++.-
T Consensus 149 ~~G~~lG~~~g~~~g~~a~~lgG~iLI~iGi~ 180 (188)
T PRK11469 149 TLGMMVGRFIGSIIGKKAEILGGLVLIGIGVQ 180 (188)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555566678888777777777777654
No 308
>COG4769 Predicted membrane protein [Function unknown]
Probab=39.37 E-value=64 Score=25.11 Aligned_cols=49 Identities=24% Similarity=0.278 Sum_probs=30.0
Q ss_pred HHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhh
Q 043735 91 LAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLLLGF 145 (336)
Q Consensus 91 ~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~g~ 145 (336)
++..+.+...-++..++|+|.+-.++.- ..-++.+|..++++.+++.+-
T Consensus 84 faG~i~S~L~m~~l~~f~~k~~S~lgiS------~mGaF~hNl~QLivas~Lv~~ 132 (181)
T COG4769 84 FAGAILSTLFMYFLYQFGPKYLSLLGIS------VMGAFTHNLGQLIVASFLVFT 132 (181)
T ss_pred HHHHHHHHHHHHHHHHcCCceEeeeehh------hHHHHHHhHHHHHHHHHHHhc
Confidence 3444455555567778887776433322 233556788888888877654
No 309
>PRK03612 spermidine synthase; Provisional
Probab=39.35 E-value=3.5e+02 Score=25.80 Aligned_cols=34 Identities=21% Similarity=0.204 Sum_probs=21.1
Q ss_pred CchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHH
Q 043735 79 SETLTLFTSSLYLAALLSSLVASSVTRKFGRKKS 112 (336)
Q Consensus 79 ~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~ 112 (336)
...++.......+|+.++..+.....+++.+..+
T Consensus 53 ~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~ 86 (521)
T PRK03612 53 STVIGLMLFAMGVGALLSKYLLRDAAAGFVAVEL 86 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Confidence 3445666666677776666655666666665543
No 310
>PRK14229 camphor resistance protein CrcB; Provisional
Probab=39.13 E-value=1.5e+02 Score=21.37 Aligned_cols=22 Identities=14% Similarity=0.101 Sum_probs=11.0
Q ss_pred HHhhhhhhhhhhHHHHhhhcCC
Q 043735 142 LLGFGIGFANQSVPLYLSEMAP 163 (336)
Q Consensus 142 l~g~~~~~~~~~~~~~~~~~~~ 163 (336)
+.+.|.-+.++.-.++..|...
T Consensus 58 ~l~tGf~GgfTTFSTf~~e~~~ 79 (108)
T PRK14229 58 ILATGFCGGLTTFSTLNDELQR 79 (108)
T ss_pred HHHhhHccccccHHHHHHHHHH
Confidence 3344433344555566666653
No 311
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=37.06 E-value=1.3e+02 Score=28.53 Aligned_cols=43 Identities=21% Similarity=0.252 Sum_probs=26.7
Q ss_pred CCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHH
Q 043735 162 APYKYRGALNIGFQLSITIGILIANVLNYFFAKIKGGWGWRLS 204 (336)
Q Consensus 162 ~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~w~~~ 204 (336)
..++.||......-....+.+.+++.+++.+.+..++..|+..
T Consensus 290 ~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~yk~~~g~~W~~~ 332 (521)
T PF02990_consen 290 LSPNNRGSLLTAAIILYALTSFIAGYVSARLYKSFGGKKWKKN 332 (521)
T ss_pred ccccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHcCCCceeeh
Confidence 3445677766666666666777777777666665544456543
No 312
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=35.48 E-value=1.6e+02 Score=20.86 Aligned_cols=33 Identities=6% Similarity=-0.105 Sum_probs=17.2
Q ss_pred HHHHHHHHHhHHhhh-hhchhHHHHHHHHHHHHH
Q 043735 91 LAALLSSLVASSVTR-KFGRKKSMLFGGVLFFAG 123 (336)
Q Consensus 91 ~~~~i~~~~~g~l~d-r~Grr~~l~~~~~~~~i~ 123 (336)
+...+...+.|...| ++|-++.+.+.+++.+++
T Consensus 53 v~pil~G~~lG~WLD~~~~t~~~~tl~~lllGv~ 86 (100)
T TIGR02230 53 AIPTLLGVAVGIWLDRHYPSPFSWTLTMLIVGVV 86 (100)
T ss_pred HHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHH
Confidence 333444555556666 677666555444444433
No 313
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=33.89 E-value=5.2e+02 Score=26.21 Aligned_cols=46 Identities=20% Similarity=0.086 Sum_probs=23.7
Q ss_pred CCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHH
Q 043735 78 NSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAG 123 (336)
Q Consensus 78 s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~ 123 (336)
+.+..-+...+......+..++..++.+|..---.++...+...++
T Consensus 7 ~~~~~~l~~~~lG~~lll~~l~s~~lkeRl~Ls~~~v~Ll~GiilG 52 (810)
T TIGR00844 7 EVTKAHVAYSCVGIFSSIFSLVSLFVKEKLYIGESMVASIFGLIVG 52 (810)
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhh
Confidence 3444445555555555666666677766655443333333333333
No 314
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=33.07 E-value=1.2e+02 Score=27.31 Aligned_cols=15 Identities=7% Similarity=0.275 Sum_probs=7.2
Q ss_pred HHHHHHHhHHhhhhh
Q 043735 93 ALLSSLVASSVTRKF 107 (336)
Q Consensus 93 ~~i~~~~~g~l~dr~ 107 (336)
..+..+..|++..|+
T Consensus 8 ~i~~ii~~G~~~~~~ 22 (385)
T PF03547_consen 8 PIFLIILLGYLLGRF 22 (385)
T ss_pred HHHHHHHHHHHHHHh
Confidence 334444455555554
No 315
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=32.76 E-value=3.9e+02 Score=24.49 Aligned_cols=47 Identities=15% Similarity=0.012 Sum_probs=24.2
Q ss_pred HHhhhhhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHH
Q 043735 142 LLGFGIGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLN 189 (336)
Q Consensus 142 l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~ 189 (336)
+.|+..+..+.....+. |...-+.---+.++...+...|.+..++..
T Consensus 298 iiG~iag~v~~~~~~~~-~~~~iDD~~~~~~vHg~~Gi~G~i~~glf~ 344 (404)
T TIGR03644 298 LIGAVGGVIVVFSIVLL-DKLKIDDPVGAISVHGVAGIWGTLVVPITN 344 (404)
T ss_pred HHHHHHHHHHHHHHHHH-HhCCCCCCcCchHhhhHHHHHHHHHHHHhc
Confidence 34444444444433333 444444445566677766666666655543
No 316
>KOG4255 consensus Uncharacterized conserved protein [Function unknown]
Probab=31.71 E-value=3.5e+02 Score=24.20 Aligned_cols=54 Identities=15% Similarity=0.101 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHHHHHhh----------hhHHHHHHHHHHHhhhhhhhhhhHHHHhhhcCCC
Q 043735 111 KSMLFGGVLFFAGALINGFA----------QGVWMLIVGRLLLGFGIGFANQSVPLYLSEMAPY 164 (336)
Q Consensus 111 ~~l~~~~~~~~i~~~~~~~~----------~~~~~~~~~r~l~g~~~~~~~~~~~~~~~~~~~~ 164 (336)
+++..-..+.++++++.++. ..-|.++..-|...+........-...+++.-|.
T Consensus 80 Piif~ll~~a~v~~l~laflW~~ts~V~g~~hS~afl~L~F~LAivdc~SnVtFLPFMs~lpp~ 143 (439)
T KOG4255|consen 80 PIIFVLLLLACVCQLGLAFLWHDTSPVFGALHSWAFLSLLFGLAIVDCTSNVTFLPFMSQLPPA 143 (439)
T ss_pred CchhHHHHHHHHHHHHHHHHHhcchhhhcCcchHHHHHHHHHHHHHHhhccchhhhhhhhCChH
Confidence 34444444446666655542 1224455555555554444445555566665543
No 317
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=31.42 E-value=1.7e+02 Score=19.99 Aligned_cols=41 Identities=15% Similarity=0.199 Sum_probs=28.3
Q ss_pred HHHHHHHHhHHhhhhhch-------hHHHHHHHHHHHHHHHHHHhhhh
Q 043735 92 AALLSSLVASSVTRKFGR-------KKSMLFGGVLFFAGALINGFAQG 132 (336)
Q Consensus 92 ~~~i~~~~~g~l~dr~Gr-------r~~l~~~~~~~~i~~~~~~~~~~ 132 (336)
+...+.+..+++.+|..+ ++.+..+.++...+.++++...+
T Consensus 30 ~~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS 77 (86)
T PF10785_consen 30 GATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRS 77 (86)
T ss_pred HHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 334556666777776655 67788888888888877777654
No 318
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=31.26 E-value=1.5e+02 Score=22.42 Aligned_cols=26 Identities=12% Similarity=0.061 Sum_probs=18.8
Q ss_pred HhhhcCCCccchhHHHHHHHHHHHHH
Q 043735 157 YLSEMAPYKYRGALNIGFQLSITIGI 182 (336)
Q Consensus 157 ~~~~~~~~~~r~~~~~~~~~~~~~g~ 182 (336)
-+.|++|++.|....+.+........
T Consensus 59 aLkdi~P~~~R~~i~~~~~~~~~~~k 84 (137)
T PF04281_consen 59 ALKDIFPPSVRNWISSTVSTTSSAVK 84 (137)
T ss_pred HHhccCCHHHHHHHHHHHHHHHHHHH
Confidence 35799999999887777765544433
No 319
>PF11298 DUF3099: Protein of unknown function (DUF3099); InterPro: IPR021449 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=30.98 E-value=1.6e+02 Score=19.56 Aligned_cols=32 Identities=6% Similarity=-0.008 Sum_probs=23.5
Q ss_pred HhhhhhchhHHHHHHHHHHHHHHHHHHhhhhH
Q 043735 102 SVTRKFGRKKSMLFGGVLFFAGALINGFAQGV 133 (336)
Q Consensus 102 ~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~ 133 (336)
.--|+-.|++.+.+.+.+-..+.++..+....
T Consensus 9 ~~~d~~~R~r~Y~i~M~~Ri~~fvlA~~~~~~ 40 (73)
T PF11298_consen 9 LSQDQRRRRRRYLIMMGIRIPCFVLAAVVYRL 40 (73)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34567788888888888888888777665544
No 320
>COG3619 Predicted membrane protein [Function unknown]
Probab=30.17 E-value=3.2e+02 Score=22.70 Aligned_cols=29 Identities=24% Similarity=0.260 Sum_probs=17.6
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhhhhhch
Q 043735 81 TLTLFTSSLYLAALLSSLVASSVTRKFGR 109 (336)
Q Consensus 81 ~~~~~~~~~~~~~~i~~~~~g~l~dr~Gr 109 (336)
..........+...+|......+..|..|
T Consensus 56 ~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~ 84 (226)
T COG3619 56 ALAVLLLLPILAFVLGVAAAELISRRATR 84 (226)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 34555666667777776666555555554
No 321
>PF01405 PsbT: Photosystem II reaction centre T protein; InterPro: IPR001743 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbT found in PSII, which is thought to be associated with the D1 (PsbA) - D2 (PsbD) heterodimer. PsbT may be involved in the formation and/or stabilisation of dimeric PSII complexes, because in the absence of this protein dimeric PSII complexes were found to be less abundant. Furthermore, although PsbT does not confer photo-protection, it is required for the efficient recovery of photo-damaged PSII [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3BZ1_T 1S5L_t 2AXT_t 3KZI_T 3PRQ_T 3BZ2_T 3PRR_T 4FBY_g 3A0H_t 3A0B_T ....
Probab=29.86 E-value=87 Score=16.45 Aligned_cols=10 Identities=10% Similarity=0.355 Sum_probs=3.5
Q ss_pred hhcccCCChH
Q 043735 218 GSLVLPDTPN 227 (336)
Q Consensus 218 ~~~~~~e~~~ 227 (336)
+..+++|+|+
T Consensus 19 fAI~FRePPr 28 (29)
T PF01405_consen 19 FAIFFREPPR 28 (29)
T ss_dssp HHHHSS----
T ss_pred hhhhccCCCC
Confidence 3456778774
No 322
>KOG2927 consensus Membrane component of ER protein translocation complex [Intracellular trafficking, secretion, and vesicular transport]
Probab=29.63 E-value=60 Score=28.64 Aligned_cols=29 Identities=28% Similarity=0.307 Sum_probs=12.8
Q ss_pred cCCCccchhHHHHHHHHHHHHHHHHHHHHHHh
Q 043735 161 MAPYKYRGALNIGFQLSITIGILIANVLNYFF 192 (336)
Q Consensus 161 ~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~ 192 (336)
++|...| -+.++.+.+.|++++.++...+
T Consensus 209 LWP~~mR---~gvyY~sig~~gfl~~IlvLaI 237 (372)
T KOG2927|consen 209 LWPRRMR---QGVYYLSIGAGGFLAFILVLAI 237 (372)
T ss_pred cCcHHHh---cceeeeecchhHHHHHHHHHHH
Confidence 3555444 2333333345555554444333
No 323
>PF11990 DUF3487: Protein of unknown function (DUF3487); InterPro: IPR021877 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 121 to 136 amino acids in length. This protein has a conserved RLN sequence motif.
Probab=28.85 E-value=2.4e+02 Score=20.80 Aligned_cols=28 Identities=18% Similarity=0.242 Sum_probs=20.4
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSV 103 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l 103 (336)
|++..+..++.....+..++.+++..++
T Consensus 20 GlT~~El~~~a~~~~~~g~~~gl~la~~ 47 (121)
T PF11990_consen 20 GLTADELGLAAGVGFVAGLVVGLPLALL 47 (121)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7888888888777776666666665555
No 324
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=28.24 E-value=4.6e+02 Score=23.90 Aligned_cols=50 Identities=12% Similarity=0.028 Sum_probs=27.3
Q ss_pred HHHhhhhhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHH
Q 043735 141 LLLGFGIGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNY 190 (336)
Q Consensus 141 ~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~ 190 (336)
++.|+..|.........+.+...-++---+.++.......|.+..++...
T Consensus 278 ~~iG~iag~i~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~glfa~ 327 (399)
T PF00909_consen 278 LLIGAIAGLISYFGVSWLLKRLKIDDPVGAFAVHGVGGIWGTILTGLFAS 327 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTS-HTTGHHHHCHHHHHHHHHHHHHHCC
T ss_pred HHhhhhHhhhhhhheecccceeEeccccceEeeeeccHHHHHHHHHHHhc
Confidence 44455444444443434445444444456777777777777666665543
No 325
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=27.28 E-value=2.9e+02 Score=25.38 Aligned_cols=59 Identities=10% Similarity=0.009 Sum_probs=42.9
Q ss_pred HHHHHHHHhhhhhhhhhhHHHHhhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 043735 136 LIVGRLLLGFGIGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILIANVLNYFFAK 194 (336)
Q Consensus 136 ~~~~r~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~ 194 (336)
++....+.+...-..+....+..+++.|++.-|+.+++.+.-.++|+--=..+...+.+
T Consensus 372 ~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D 430 (510)
T KOG3574|consen 372 LITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLAD 430 (510)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcc
Confidence 33345666666666677778889999999999999999999888886554444444444
No 326
>PRK14230 camphor resistance protein CrcB; Provisional
Probab=26.88 E-value=2.6e+02 Score=20.52 Aligned_cols=23 Identities=22% Similarity=0.109 Sum_probs=10.3
Q ss_pred HHHHhhhhhhhhhhHHHHhhhcC
Q 043735 140 RLLLGFGIGFANQSVPLYLSEMA 162 (336)
Q Consensus 140 r~l~g~~~~~~~~~~~~~~~~~~ 162 (336)
|.+.+.|.-+.++.-.++..|..
T Consensus 60 ~~~l~tGflGgfTTFSTf~~e~~ 82 (119)
T PRK14230 60 KLLLITGFLGSLTTLSGFSLETV 82 (119)
T ss_pred HHHHHHHHhchHhhHHHHHHHHH
Confidence 33333333333445555555554
No 327
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=26.79 E-value=3.4e+02 Score=21.92 Aligned_cols=28 Identities=11% Similarity=0.247 Sum_probs=19.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 043735 167 RGALNIGFQLSITIGILIANVLNYFFAK 194 (336)
Q Consensus 167 r~~~~~~~~~~~~~g~~~~~~l~~~~~~ 194 (336)
.+++..+.-.+..+|.++|..+..++..
T Consensus 139 ~~rA~~~~~~~L~~G~~lGs~l~~~l~~ 166 (194)
T PF11833_consen 139 LGRAFLWTLGGLVVGLILGSLLASWLPV 166 (194)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 3777777766777777777777766644
No 328
>PRK11588 hypothetical protein; Provisional
Probab=26.05 E-value=5.8e+02 Score=24.27 Aligned_cols=33 Identities=18% Similarity=0.264 Sum_probs=17.5
Q ss_pred HHhhhhhchhHHHHH--HHHHHHHHHHHHHhhhhH
Q 043735 101 SSVTRKFGRKKSMLF--GGVLFFAGALINGFAQGV 133 (336)
Q Consensus 101 g~l~dr~Grr~~l~~--~~~~~~i~~~~~~~~~~~ 133 (336)
+++.+|++.|..+++ ..++++++....+...+.
T Consensus 137 ~~l~~k~~~~~~llIpil~~lFsl~G~~~G~~Ee~ 171 (506)
T PRK11588 137 LALIRKTRGNEILFIPVLFILFSLGGAVFGMGEEA 171 (506)
T ss_pred HHHHHHhCCCcEEeHHHHHHHHHHHHHHhhhhHHH
Confidence 677888876643333 334444444444444443
No 329
>PRK11875 psbT photosystem II reaction center protein T; Reviewed
Probab=25.85 E-value=1.1e+02 Score=16.29 Aligned_cols=10 Identities=20% Similarity=0.438 Sum_probs=6.4
Q ss_pred hhcccCCChH
Q 043735 218 GSLVLPDTPN 227 (336)
Q Consensus 218 ~~~~~~e~~~ 227 (336)
...+++|+|+
T Consensus 19 FAIfFRepPr 28 (31)
T PRK11875 19 FAIAFRDPPK 28 (31)
T ss_pred HhhhccCCCC
Confidence 3456788874
No 330
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=25.77 E-value=1.8e+02 Score=22.18 Aligned_cols=25 Identities=16% Similarity=0.252 Sum_probs=18.3
Q ss_pred HhhhcCCCccchhHHHHHHHHHHHH
Q 043735 157 YLSEMAPYKYRGALNIGFQLSITIG 181 (336)
Q Consensus 157 ~~~~~~~~~~r~~~~~~~~~~~~~g 181 (336)
-+.|++|+..|....+.+.......
T Consensus 57 ALkDm~Pp~~R~~i~~~~s~t~s~~ 81 (145)
T TIGR00986 57 ALKDIVPPTTRGWIYHKYSTTTNFV 81 (145)
T ss_pred HHHhhCCHHHHHHHHHHHHHHHHHH
Confidence 4579999999988777766554443
No 331
>COG2119 Predicted membrane protein [Function unknown]
Probab=25.58 E-value=2.9e+02 Score=22.15 Aligned_cols=38 Identities=21% Similarity=0.324 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHH
Q 043735 87 SSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGA 124 (336)
Q Consensus 87 ~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~ 124 (336)
....++..++.+.+.++++|+..|.+-..+.+++.+..
T Consensus 141 lg~~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~fa 178 (190)
T COG2119 141 LGMILASVLAVLLGKLIAGKLPERLLRFIAALLFLIFA 178 (190)
T ss_pred HHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHH
Confidence 33445666777788889999999988877766665554
No 332
>PLN02332 membrane bound O-acyl transferase (MBOAT) family protein
Probab=25.48 E-value=5.2e+02 Score=24.23 Aligned_cols=31 Identities=19% Similarity=0.235 Sum_probs=20.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Q 043735 108 GRKKSMLFGGVLFFAGALINGFAQGVWMLIV 138 (336)
Q Consensus 108 Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~ 138 (336)
|.|+.+.-..+.+.++.+++++.+++....+
T Consensus 339 ~~~~~~~~~~~t~~~sa~WHG~~~gYyl~fl 369 (465)
T PLN02332 339 GKKPGFFQLLATQTVSAVWHGLYPGYILFFV 369 (465)
T ss_pred CcchhHHHHHHHHHHHHHHhcCCcHHHHHHH
Confidence 3445555556677788888888877655443
No 333
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=25.28 E-value=6.9e+02 Score=24.94 Aligned_cols=50 Identities=20% Similarity=0.285 Sum_probs=30.9
Q ss_pred hHHhhhh----hchhHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHhhhhhh
Q 043735 100 ASSVTRK----FGRKKSMLFGGVLFFAGALINGFAQ-GVWMLIVGRLLLGFGIGF 149 (336)
Q Consensus 100 ~g~l~dr----~Grr~~l~~~~~~~~i~~~~~~~~~-~~~~~~~~r~l~g~~~~~ 149 (336)
.+-+.|. -||.+-++++.+++.++++...+.. ..+.+...-++.+++.+.
T Consensus 43 a~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~m 97 (701)
T TIGR01667 43 AAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFIL 97 (701)
T ss_pred hhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 3445553 3667778888888888887776544 444555555555555443
No 334
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=24.52 E-value=4.5e+02 Score=22.52 Aligned_cols=35 Identities=29% Similarity=0.387 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHh-hhhHHHHHHHHHHHhhhhhh
Q 043735 115 FGGVLFFAGALINGF-AQGVWMLIVGRLLLGFGIGF 149 (336)
Q Consensus 115 ~~~~~~~i~~~~~~~-~~~~~~~~~~r~l~g~~~~~ 149 (336)
.+.+++++++++..+ .++.+.+.+.-++.+++.+.
T Consensus 4 ~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~m 39 (284)
T PF12805_consen 4 ATLLCFALASLLVGLLFPYPWLLILVLALLTFFFGM 39 (284)
T ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 344444444444443 34445555555555555443
No 335
>COG1422 Predicted membrane protein [Function unknown]
Probab=24.18 E-value=3.9e+02 Score=21.68 Aligned_cols=11 Identities=9% Similarity=0.486 Sum_probs=5.4
Q ss_pred HHHHHHHHHHH
Q 043735 179 TIGILIANVLN 189 (336)
Q Consensus 179 ~~g~~~~~~l~ 189 (336)
.+...++|.+.
T Consensus 32 ~ln~~f~P~i~ 42 (201)
T COG1422 32 ALNVVFGPLLS 42 (201)
T ss_pred HHHHHHhhhcc
Confidence 34445555544
No 336
>PF13493 DUF4118: Domain of unknown function (DUF4118); PDB: 2KSF_A.
Probab=23.76 E-value=1.3e+02 Score=21.10 Aligned_cols=25 Identities=16% Similarity=0.305 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHhHHhhhhhchh
Q 043735 86 TSSLYLAALLSSLVASSVTRKFGRK 110 (336)
Q Consensus 86 ~~~~~~~~~i~~~~~g~l~dr~Grr 110 (336)
.......+.+.+.+.|.+.||..||
T Consensus 81 ~~~~~~~~l~va~v~g~l~~~~r~~ 105 (105)
T PF13493_consen 81 DWITFAVFLVVALVTGYLADRYRRQ 105 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 4455667777888999999998776
No 337
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=23.39 E-value=1.4e+02 Score=26.56 Aligned_cols=74 Identities=18% Similarity=0.271 Sum_probs=48.4
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHH-Hhh---hhHHHHHHHHHHHhhhhhh
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALIN-GFA---QGVWMLIVGRLLLGFGIGF 149 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~-~~~---~~~~~~~~~r~l~g~~~~~ 149 (336)
++.-++++.....+.++-++.+...|.|..++||-+.+..+.+.-..-.... ... .+.+.+.+.-.+.|++-+.
T Consensus 306 ~~Gv~~igf~m~cfgv~~Av~S~~~g~L~~~~gr~~~~v~gavv~l~li~~~~~w~~~~~~~~i~y~~aalwgv~d~v 383 (390)
T KOG3097|consen 306 ALGVSRIGFAMACFGVGDAVASSLFGLLGKWIGRPPLLVLGAVVHLLLITILFFWAPNPQDSWIFYVAAALWGVGDAV 383 (390)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHHhcccCCCCceEEEeehhhcCccHHH
Confidence 4556678888999999999999999999999999998877654433222211 111 2344444445555555443
No 338
>CHL00031 psbT photosystem II protein T
Probab=22.96 E-value=1.3e+02 Score=16.35 Aligned_cols=10 Identities=10% Similarity=0.371 Sum_probs=6.6
Q ss_pred hhcccCCChH
Q 043735 218 GSLVLPDTPN 227 (336)
Q Consensus 218 ~~~~~~e~~~ 227 (336)
+..+++|+|+
T Consensus 19 FAI~FRePPr 28 (33)
T CHL00031 19 FAIFFREPPK 28 (33)
T ss_pred HhheecCCCC
Confidence 3456788875
No 339
>COG1480 Predicted membrane-associated HD superfamily hydrolase [General function prediction only]
Probab=22.81 E-value=7.5e+02 Score=24.45 Aligned_cols=35 Identities=31% Similarity=0.428 Sum_probs=20.4
Q ss_pred HHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHH
Q 043735 93 ALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALIN 127 (336)
Q Consensus 93 ~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~ 127 (336)
..+.++-...+..|..||-..+.+.+..++..++.
T Consensus 383 ~l~s~~~~~~~l~~~s~rs~i~~~g~~~~~~~m~~ 417 (700)
T COG1480 383 ALLSSFSALVLLRKMSRRSDILKSGLFLALMNMLL 417 (700)
T ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHH
Confidence 34444555666667777776666655555554433
No 340
>PRK10692 hypothetical protein; Provisional
Probab=21.84 E-value=2.7e+02 Score=19.05 Aligned_cols=17 Identities=41% Similarity=0.612 Sum_probs=9.3
Q ss_pred hhHHHHHHHHHHHHHHH
Q 043735 109 RKKSMLFGGVLFFAGAL 125 (336)
Q Consensus 109 rr~~l~~~~~~~~i~~~ 125 (336)
||...+++.++++++.+
T Consensus 3 Rk~a~~~GN~lMglGmv 19 (92)
T PRK10692 3 RKNASLLGNVLMGLGLV 19 (92)
T ss_pred chhhHHHhhHHHHHHHH
Confidence 45555555555555543
No 341
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=20.71 E-value=3.9e+02 Score=20.42 Aligned_cols=44 Identities=7% Similarity=0.073 Sum_probs=33.3
Q ss_pred cccccCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHH
Q 043735 72 NQYCQYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLF 115 (336)
Q Consensus 72 ~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~ 115 (336)
.-+.|++....-....+.++.-.++-++..+++|+.++-..+.+
T Consensus 64 ~VeiGi~EkslL~sA~LvYi~PL~~l~v~~~La~~L~~~e~~~~ 107 (150)
T COG3086 64 KVELGIEEKSLLKSALLVYIFPLVGLFLGAILAQYLFFSELIVI 107 (150)
T ss_pred EEEEccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 44567777777677777888888888899999999888665443
No 342
>PF07456 Hpre_diP_synt_I: Heptaprenyl diphosphate synthase component I; InterPro: IPR010898 This family contains component I of bacterial heptaprenyl diphosphate synthase (2.5.1.30 from EC) (approximately 170 residues long). This is one of the two dissociable subunits that form the enzyme, both of which are required for the catalysis of the biosynthesis of the side chain of menaquinone-7 [].
Probab=20.30 E-value=4.1e+02 Score=20.43 Aligned_cols=51 Identities=29% Similarity=0.313 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 043735 86 TSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGFAQGVWMLIVGRLL 142 (336)
Q Consensus 86 ~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~r~l 142 (336)
...+.++..+.+...-.+..|..||+.=.++.. +.-+.++|..|+.+..++
T Consensus 67 ~f~~Sl~Ggl~S~~vM~ll~~~~~~~~S~~giS------i~Gai~HN~gQl~va~~i 117 (148)
T PF07456_consen 67 SFLFSLAGGLLSLLVMALLKKLFKKKFSLIGIS------IAGAIAHNIGQLIVASLI 117 (148)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCccHHHHH------HHHHHHHHHHHHHHHHHH
Confidence 355666777777777778888877665444332 234456777777776654
No 343
>PF13940 Ldr_toxin: Toxin Ldr, type I toxin-antitoxin system
Probab=20.25 E-value=1.7e+02 Score=15.96 Aligned_cols=20 Identities=15% Similarity=0.379 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHhHHhhhh
Q 043735 87 SSLYLAALLSSLVASSVTRK 106 (336)
Q Consensus 87 ~~~~~~~~i~~~~~g~l~dr 106 (336)
++..++..+.+++.||+-+|
T Consensus 15 AAP~iagIi~s~iv~w~~~R 34 (35)
T PF13940_consen 15 AAPIIAGIIASLIVGWLRNR 34 (35)
T ss_pred HhHHHHHHHHHHHHHHHHhc
Confidence 44556667777777777554
No 344
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=20.17 E-value=4.3e+02 Score=24.07 Aligned_cols=92 Identities=15% Similarity=0.144 Sum_probs=51.1
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHHhhhhhchhHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHhhhhhhhhhhH
Q 043735 76 QYNSETLTLFTSSLYLAALLSSLVASSVTRKFGRKKSMLFGGVLFFAGALINGF-AQGVWMLIVGRLLLGFGIGFANQSV 154 (336)
Q Consensus 76 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~-~~~~~~~~~~r~l~g~~~~~~~~~~ 154 (336)
|+|.++...+.+...+...++.++-.+-.-++|.|..+..+.....+....... ...+......-++.|+..-... ..
T Consensus 24 gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~~~~~~~~~~~~~~~ga~~v~Gii~illg-~~ 102 (406)
T TIGR03173 24 GLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGPMIAIGAGGGLGAIFGAVIVAGLFVILLA-PF 102 (406)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH-HH
Confidence 788888888888888888888888753333567666555544433333222211 2233444444455554322222 23
Q ss_pred HHHhhhcCCCccch
Q 043735 155 PLYLSEMAPYKYRG 168 (336)
Q Consensus 155 ~~~~~~~~~~~~r~ 168 (336)
...+.+.+|+...|
T Consensus 103 ~~~l~~~iPp~v~G 116 (406)
T TIGR03173 103 FSKLVRFFPPVVTG 116 (406)
T ss_pred HHHHHHHCCcHHHH
Confidence 44566777765444
Done!