Query 043738
Match_columns 368
No_of_seqs 181 out of 1574
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 07:53:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043738.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043738hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02575 haloacid dehalogenase 100.0 1.1E-80 2.4E-85 599.6 34.6 368 1-368 13-381 (381)
2 PLN03243 haloacid dehalogenase 100.0 3.3E-42 7.2E-47 320.9 27.4 259 96-354 2-260 (260)
3 PLN02770 haloacid dehalogenase 100.0 1.5E-29 3.3E-34 234.7 24.5 206 117-325 21-232 (248)
4 TIGR01422 phosphonatase phosph 100.0 4.9E-29 1.1E-33 231.7 23.7 209 118-327 2-251 (253)
5 PRK13288 pyrophosphatase PpaX; 100.0 6.8E-29 1.5E-33 225.0 23.2 204 117-327 2-209 (214)
6 PRK13226 phosphoglycolate phos 100.0 1.5E-28 3.2E-33 225.4 23.8 207 118-326 12-222 (229)
7 PRK10826 2-deoxyglucose-6-phos 100.0 1.1E-28 2.3E-33 225.0 22.7 211 117-328 6-219 (222)
8 TIGR01449 PGP_bact 2-phosphogl 100.0 1.6E-28 3.5E-33 221.8 23.2 205 121-326 1-211 (213)
9 TIGR03351 PhnX-like phosphonat 100.0 2.9E-28 6.3E-33 221.6 23.9 209 118-327 1-218 (220)
10 PRK13478 phosphonoacetaldehyde 100.0 3.1E-28 6.7E-33 228.3 24.6 211 117-328 3-254 (267)
11 COG0546 Gph Predicted phosphat 100.0 5.7E-28 1.2E-32 220.1 24.5 210 117-328 3-217 (220)
12 PRK13222 phosphoglycolate phos 100.0 9E-28 2E-32 218.8 25.5 216 116-332 4-225 (226)
13 PRK13223 phosphoglycolate phos 100.0 1.2E-27 2.7E-32 224.7 25.0 224 116-341 11-242 (272)
14 PRK11587 putative phosphatase; 100.0 7.4E-28 1.6E-32 219.0 22.6 203 117-325 2-204 (218)
15 COG0637 Predicted phosphatase/ 100.0 7.9E-28 1.7E-32 219.3 19.2 187 118-307 2-190 (221)
16 PRK10563 6-phosphogluconate ph 100.0 1.6E-27 3.5E-32 216.9 18.6 209 117-329 3-213 (221)
17 PRK10725 fructose-1-P/6-phosph 99.9 1.4E-26 3.1E-31 205.2 20.2 186 114-303 1-186 (188)
18 PRK13225 phosphoglycolate phos 99.9 4.4E-26 9.5E-31 213.9 23.7 203 118-328 62-267 (273)
19 PLN02940 riboflavin kinase 99.9 2E-26 4.3E-31 226.0 22.3 207 117-326 10-218 (382)
20 TIGR02009 PGMB-YQAB-SF beta-ph 99.9 3E-26 6.6E-31 202.3 21.1 181 118-302 1-185 (185)
21 PLN02779 haloacid dehalogenase 99.9 7E-26 1.5E-30 214.2 24.8 216 117-332 39-276 (286)
22 TIGR01454 AHBA_synth_RP 3-amin 99.9 6.6E-26 1.4E-30 204.0 22.2 197 121-326 1-201 (205)
23 TIGR02253 CTE7 HAD superfamily 99.9 8E-26 1.7E-30 205.5 20.0 201 118-324 2-220 (221)
24 PRK09449 dUMP phosphatase; Pro 99.9 3E-25 6.5E-30 202.3 23.6 205 117-327 2-221 (224)
25 TIGR01990 bPGM beta-phosphoglu 99.9 1.8E-25 3.8E-30 197.5 20.4 180 120-303 1-185 (185)
26 TIGR02254 YjjG/YfnB HAD superf 99.9 1.2E-24 2.5E-29 197.9 24.0 205 118-326 1-222 (224)
27 PRK14988 GMP/IMP nucleotidase; 99.9 1.7E-24 3.8E-29 197.7 18.5 125 200-325 90-215 (224)
28 PRK06698 bifunctional 5'-methy 99.9 5.8E-24 1.3E-28 213.9 23.4 207 117-328 240-453 (459)
29 PLN02919 haloacid dehalogenase 99.9 7E-24 1.5E-28 230.6 24.2 213 118-334 75-295 (1057)
30 TIGR02252 DREG-2 REG-2-like, H 99.9 1E-23 2.2E-28 189.4 18.4 178 119-301 1-203 (203)
31 TIGR01428 HAD_type_II 2-haloal 99.9 6.7E-24 1.4E-28 189.9 16.5 105 202-306 91-195 (198)
32 PF13419 HAD_2: Haloacid dehal 99.9 1.3E-23 2.8E-28 182.3 17.5 174 121-302 1-176 (176)
33 PRK10748 flavin mononucleotide 99.9 1.6E-23 3.4E-28 193.2 18.8 120 202-327 112-237 (238)
34 KOG2914 Predicted haloacid-hal 99.9 5.6E-23 1.2E-27 185.1 20.1 208 114-324 6-218 (222)
35 PLN02811 hydrolase 99.9 7.9E-23 1.7E-27 186.2 18.4 198 125-325 1-207 (220)
36 COG1011 Predicted hydrolase (H 99.9 9.6E-23 2.1E-27 185.9 18.3 127 201-328 97-226 (229)
37 TIGR01548 HAD-SF-IA-hyp1 haloa 99.9 1.4E-22 3E-27 181.4 17.8 173 120-295 2-197 (197)
38 TIGR02247 HAD-1A3-hyp Epoxide 99.9 8.7E-23 1.9E-27 184.5 16.6 184 118-305 2-198 (211)
39 TIGR01509 HAD-SF-IA-v3 haloaci 99.9 3.9E-22 8.4E-27 175.4 17.7 112 190-302 71-183 (183)
40 PHA02597 30.2 hypothetical pro 99.9 5.6E-22 1.2E-26 177.4 16.3 188 118-325 2-195 (197)
41 TIGR01993 Pyr-5-nucltdase pyri 99.9 6.5E-22 1.4E-26 175.0 14.2 169 120-302 2-184 (184)
42 PRK09456 ?-D-glucose-1-phospha 99.9 3.4E-21 7.4E-26 172.7 19.0 105 203-307 84-189 (199)
43 TIGR01549 HAD-SF-IA-v1 haloaci 99.9 2.7E-20 5.8E-25 159.7 17.5 154 120-296 1-154 (154)
44 PLN02954 phosphoserine phospha 99.9 6.4E-20 1.4E-24 167.2 19.6 193 117-326 11-221 (224)
45 TIGR00338 serB phosphoserine p 99.9 1.8E-20 3.9E-25 170.2 15.8 190 115-324 11-215 (219)
46 PRK11133 serB phosphoserine ph 99.8 2.4E-20 5.1E-25 178.5 13.7 200 100-319 92-304 (322)
47 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.8 1.8E-19 3.8E-24 161.1 15.8 177 118-306 4-193 (201)
48 KOG3085 Predicted hydrolase (H 99.8 2E-19 4.4E-24 162.7 15.1 189 116-306 5-216 (237)
49 PRK08942 D,D-heptose 1,7-bisph 99.8 3.2E-19 6.9E-24 157.6 15.4 126 202-329 28-177 (181)
50 TIGR01691 enolase-ppase 2,3-di 99.8 1.3E-18 2.9E-23 157.8 19.9 185 118-306 1-199 (220)
51 TIGR00213 GmhB_yaeD D,D-heptos 99.8 9.6E-19 2.1E-23 153.9 16.0 122 202-325 25-175 (176)
52 TIGR01493 HAD-SF-IA-v2 Haloaci 99.8 3.7E-19 8E-24 155.9 11.6 87 202-295 89-175 (175)
53 PRK06769 hypothetical protein; 99.8 1.1E-18 2.3E-23 153.2 13.6 127 202-328 27-171 (173)
54 TIGR01656 Histidinol-ppas hist 99.8 8.1E-19 1.8E-23 149.9 10.9 103 203-305 27-147 (147)
55 PRK09552 mtnX 2-hydroxy-3-keto 99.8 7E-18 1.5E-22 153.6 13.5 195 119-333 4-216 (219)
56 PRK13582 thrH phosphoserine ph 99.8 1.6E-17 3.4E-22 149.2 15.3 194 118-333 1-200 (205)
57 TIGR01672 AphA HAD superfamily 99.8 3.1E-17 6.7E-22 150.2 16.2 150 116-306 61-214 (237)
58 TIGR01685 MDP-1 magnesium-depe 99.7 2E-18 4.2E-23 150.9 6.5 107 201-307 43-161 (174)
59 TIGR01662 HAD-SF-IIIA HAD-supe 99.7 4.5E-17 9.8E-22 136.3 13.9 97 203-303 25-131 (132)
60 TIGR01261 hisB_Nterm histidino 99.7 2.4E-17 5.2E-22 142.8 12.1 103 202-306 28-150 (161)
61 cd01427 HAD_like Haloacid deha 99.7 8.2E-17 1.8E-21 133.2 11.6 102 201-302 22-139 (139)
62 TIGR01489 DKMTPPase-SF 2,3-dik 99.7 1.7E-16 3.8E-21 140.0 13.9 94 202-298 71-184 (188)
63 COG0560 SerB Phosphoserine pho 99.7 5.8E-16 1.3E-20 140.0 15.3 170 117-301 4-185 (212)
64 TIGR03333 salvage_mtnX 2-hydro 99.7 7.7E-16 1.7E-20 139.7 12.9 190 121-328 2-208 (214)
65 TIGR02137 HSK-PSP phosphoserin 99.7 5.7E-15 1.2E-19 132.8 18.1 186 119-330 2-197 (203)
66 TIGR01664 DNA-3'-Pase DNA 3'-p 99.7 7.9E-16 1.7E-20 134.0 11.6 97 203-301 42-160 (166)
67 KOG3109 Haloacid dehalogenase- 99.6 6E-15 1.3E-19 129.6 15.5 193 117-323 14-222 (244)
68 TIGR01488 HAD-SF-IB Haloacid D 99.6 6.2E-15 1.3E-19 129.0 14.9 95 201-295 71-177 (177)
69 TIGR01490 HAD-SF-IB-hyp1 HAD-s 99.6 5.5E-15 1.2E-19 132.4 14.2 100 202-301 86-196 (202)
70 TIGR01458 HAD-SF-IIA-hyp3 HAD- 99.6 1.8E-15 3.9E-20 141.1 7.5 124 205-328 122-254 (257)
71 TIGR01452 PGP_euk phosphoglyco 99.6 2.5E-15 5.3E-20 141.8 5.6 120 204-324 144-279 (279)
72 PF00702 Hydrolase: haloacid d 99.6 8.4E-15 1.8E-19 131.7 8.5 90 202-296 126-215 (215)
73 TIGR01681 HAD-SF-IIIC HAD-supe 99.6 1.5E-14 3.2E-19 120.6 9.2 88 203-294 29-126 (128)
74 PRK05446 imidazole glycerol-ph 99.6 5.1E-14 1.1E-18 135.9 13.6 101 202-304 29-149 (354)
75 PRK11009 aphA acid phosphatase 99.5 7.5E-14 1.6E-18 127.9 13.6 96 202-306 113-214 (237)
76 PRK11590 hypothetical protein; 99.5 3.8E-13 8.2E-18 121.8 18.2 177 118-304 6-203 (211)
77 PHA02530 pseT polynucleotide k 99.5 3.5E-14 7.6E-19 135.2 11.7 104 202-305 186-298 (300)
78 PRK09484 3-deoxy-D-manno-octul 99.5 4.9E-14 1.1E-18 124.8 9.2 109 211-330 56-170 (183)
79 TIGR01668 YqeG_hyp_ppase HAD s 99.5 2.4E-13 5.1E-18 119.0 11.7 97 203-308 43-141 (170)
80 KOG1615 Phosphoserine phosphat 99.5 3.1E-13 6.8E-18 116.6 10.0 161 116-294 14-191 (227)
81 PRK10444 UMP phosphatase; Prov 99.4 1.4E-13 3E-18 127.6 6.3 74 252-325 167-246 (248)
82 TIGR01457 HAD-SF-IIA-hyp2 HAD- 99.4 8.9E-14 1.9E-18 129.1 4.7 79 246-324 165-249 (249)
83 PRK10530 pyridoxal phosphate ( 99.4 1.4E-12 3E-17 122.1 12.2 116 205-323 139-260 (272)
84 PLN02645 phosphoglycolate phos 99.4 1.5E-13 3.3E-18 131.6 5.1 113 214-326 181-305 (311)
85 PF06888 Put_Phosphatase: Puta 99.4 7.2E-12 1.6E-16 114.3 15.6 171 120-306 2-200 (234)
86 COG2179 Predicted hydrolase of 99.4 1.9E-12 4.2E-17 109.5 10.6 89 206-303 49-138 (175)
87 smart00577 CPDc catalytic doma 99.4 9.3E-13 2E-17 112.6 6.9 95 202-300 44-139 (148)
88 TIGR02726 phenyl_P_delta pheny 99.4 1.8E-12 4E-17 112.9 8.3 99 211-320 42-140 (169)
89 COG0241 HisB Histidinol phosph 99.4 2.9E-11 6.3E-16 105.5 15.1 121 203-325 31-173 (181)
90 TIGR01544 HAD-SF-IE haloacid d 99.3 1.5E-11 3.2E-16 114.7 13.6 95 201-295 119-230 (277)
91 TIGR01670 YrbI-phosphatas 3-de 99.3 8.7E-12 1.9E-16 107.3 8.5 101 211-322 36-136 (154)
92 PRK08238 hypothetical protein; 99.3 9.3E-11 2E-15 118.1 16.6 98 202-306 71-168 (479)
93 PF13242 Hydrolase_like: HAD-h 99.3 1.6E-11 3.5E-16 92.5 8.3 68 257-324 2-75 (75)
94 TIGR01663 PNK-3'Pase polynucle 99.3 2.6E-11 5.6E-16 122.7 11.7 93 203-297 197-305 (526)
95 TIGR01686 FkbH FkbH-like domai 99.3 3E-11 6.5E-16 116.2 11.5 90 204-298 32-125 (320)
96 PRK01158 phosphoglycolate phos 99.3 4E-11 8.6E-16 109.5 11.8 98 222-323 118-218 (230)
97 TIGR01545 YfhB_g-proteo haloac 99.2 3.1E-10 6.6E-15 102.7 15.4 121 177-303 72-201 (210)
98 COG4229 Predicted enolase-phos 99.2 1.4E-09 3.1E-14 93.2 16.3 102 202-305 102-206 (229)
99 COG0647 NagD Predicted sugar p 99.2 1.3E-10 2.9E-15 107.9 9.4 72 256-327 187-264 (269)
100 TIGR01482 SPP-subfamily Sucros 99.1 1.9E-11 4E-16 111.3 3.2 100 222-323 110-210 (225)
101 PTZ00445 p36-lilke protein; Pr 99.1 3E-10 6.4E-15 100.6 10.3 103 203-305 75-207 (219)
102 PF12710 HAD: haloacid dehalog 99.1 3.9E-10 8.4E-15 99.7 10.1 86 206-293 92-192 (192)
103 TIGR01487 SPP-like sucrose-pho 99.1 5.4E-11 1.2E-15 107.8 4.4 99 221-322 109-207 (215)
104 TIGR01460 HAD-SF-IIA Haloacid 99.1 2.6E-10 5.7E-15 105.0 8.0 49 256-304 185-235 (236)
105 PRK10513 sugar phosphate phosp 99.1 1.4E-09 3.1E-14 101.8 12.1 68 254-323 190-257 (270)
106 PF12689 Acid_PPase: Acid Phos 99.1 4.7E-10 1E-14 97.4 7.9 102 201-307 43-155 (169)
107 TIGR01456 CECR5 HAD-superfamil 99.1 5E-09 1.1E-13 100.9 15.6 73 256-328 230-320 (321)
108 PRK00192 mannosyl-3-phosphogly 99.0 9.5E-10 2.1E-14 103.4 10.2 90 214-309 143-240 (273)
109 PRK15126 thiamin pyrimidine py 99.0 1.9E-10 4.1E-15 108.0 5.1 79 254-334 182-263 (272)
110 KOG3120 Predicted haloacid deh 99.0 2.4E-09 5.3E-14 94.5 11.5 106 202-307 83-214 (256)
111 PRK10976 putative hydrolase; P 99.0 9E-10 2E-14 103.0 8.0 67 255-323 185-253 (266)
112 TIGR01459 HAD-SF-IIA-hyp4 HAD- 99.0 3.2E-10 6.9E-15 104.8 4.6 98 205-303 140-241 (242)
113 TIGR01459 HAD-SF-IIA-hyp4 HAD- 99.0 1.4E-09 3E-14 100.6 8.3 90 203-297 24-116 (242)
114 COG0561 Cof Predicted hydrolas 99.0 4.2E-10 9.2E-15 105.1 4.9 67 255-323 184-250 (264)
115 TIGR01533 lipo_e_P4 5'-nucleot 98.9 2.2E-08 4.8E-13 93.3 14.5 84 202-292 117-204 (266)
116 PRK03669 mannosyl-3-phosphogly 98.9 2.9E-09 6.2E-14 100.0 6.8 70 253-322 180-256 (271)
117 PLN02887 hydrolase family prot 98.9 1E-08 2.3E-13 105.3 11.3 68 254-323 501-568 (580)
118 TIGR00099 Cof-subfamily Cof su 98.8 6.4E-08 1.4E-12 90.0 13.8 67 255-323 183-249 (256)
119 PF08282 Hydrolase_3: haloacid 98.8 3E-08 6.5E-13 90.6 11.2 65 257-323 183-247 (254)
120 TIGR01525 ATPase-IB_hvy heavy 98.8 1.7E-08 3.8E-13 104.2 10.2 114 202-328 383-499 (556)
121 PF09419 PGP_phosphatase: Mito 98.8 3.9E-08 8.5E-13 85.2 10.7 86 210-305 66-166 (168)
122 TIGR01512 ATPase-IB2_Cd heavy 98.8 2.1E-08 4.5E-13 103.2 10.0 115 202-328 361-478 (536)
123 TIGR02244 HAD-IG-Ncltidse HAD 98.8 2.8E-07 6E-12 88.8 16.9 103 202-304 183-324 (343)
124 TIGR02463 MPGP_rel mannosyl-3- 98.8 1.2E-07 2.5E-12 86.2 13.6 69 227-300 147-219 (221)
125 COG4359 Uncharacterized conser 98.8 1.1E-07 2.4E-12 81.8 12.3 125 201-331 71-214 (220)
126 PF08645 PNK3P: Polynucleotide 98.8 1.9E-08 4.1E-13 86.9 7.2 96 203-300 29-153 (159)
127 TIGR01684 viral_ppase viral ph 98.8 2.8E-08 6E-13 92.7 8.6 60 206-265 149-208 (301)
128 KOG2882 p-Nitrophenyl phosphat 98.7 4E-08 8.7E-13 91.1 8.4 71 255-325 220-300 (306)
129 TIGR02471 sucr_syn_bact_C sucr 98.7 1.5E-08 3.3E-13 93.1 5.2 49 253-301 152-200 (236)
130 TIGR01511 ATPase-IB1_Cu copper 98.7 6.9E-08 1.5E-12 99.8 10.1 113 202-328 404-518 (562)
131 TIGR01485 SPP_plant-cyano sucr 98.7 1E-07 2.2E-12 88.4 9.4 53 253-305 160-212 (249)
132 TIGR02251 HIF-SF_euk Dullard-l 98.7 1.5E-08 3.3E-13 87.8 3.3 99 202-304 41-140 (162)
133 KOG3040 Predicted sugar phosph 98.6 9.4E-08 2E-12 83.9 7.1 76 256-331 178-259 (262)
134 COG4087 Soluble P-type ATPase 98.6 2.5E-07 5.5E-12 75.3 9.0 119 202-330 29-148 (152)
135 PRK10671 copA copper exporting 98.5 2.8E-07 6E-12 99.7 9.5 113 203-328 650-764 (834)
136 TIGR01522 ATPase-IIA2_Ca golgi 98.5 4E-07 8.6E-12 98.9 10.4 125 203-328 528-670 (884)
137 PHA03398 viral phosphatase sup 98.4 9.6E-07 2.1E-11 82.6 8.2 49 206-254 151-199 (303)
138 PRK10187 trehalose-6-phosphate 98.4 4.3E-06 9.3E-11 78.4 12.3 71 256-333 170-244 (266)
139 COG1778 Low specificity phosph 98.4 5.2E-07 1.1E-11 75.9 5.0 98 211-319 43-140 (170)
140 PF06941 NT5C: 5' nucleotidase 98.4 7.7E-07 1.7E-11 79.2 6.2 109 201-330 71-187 (191)
141 KOG2630 Enolase-phosphatase E- 98.3 4.7E-05 1E-09 68.1 15.1 120 203-324 123-248 (254)
142 smart00775 LNS2 LNS2 domain. T 98.2 1.9E-05 4.1E-10 68.1 11.1 95 204-298 28-141 (157)
143 TIGR02461 osmo_MPG_phos mannos 98.2 7.1E-06 1.5E-10 75.0 8.5 43 258-300 179-223 (225)
144 PRK11033 zntA zinc/cadmium/mer 98.2 9.6E-06 2.1E-10 86.5 10.5 112 202-328 567-680 (741)
145 TIGR01116 ATPase-IIA1_Ca sarco 98.1 6.5E-06 1.4E-10 89.9 8.8 125 202-328 536-682 (917)
146 TIGR02250 FCP1_euk FCP1-like p 98.1 2.7E-06 5.9E-11 73.2 3.9 82 202-289 57-140 (156)
147 TIGR01497 kdpB K+-transporting 98.1 1.6E-05 3.4E-10 83.3 9.8 113 203-328 446-560 (675)
148 TIGR01675 plant-AP plant acid 98.1 0.0001 2.2E-09 67.2 13.4 98 202-301 119-220 (229)
149 PRK14010 potassium-transportin 98.0 2.9E-05 6.2E-10 81.4 10.8 113 203-328 441-555 (673)
150 PRK01122 potassium-transportin 98.0 2.9E-05 6.3E-10 81.5 10.4 113 203-328 445-559 (679)
151 COG2217 ZntA Cation transport 98.0 2.7E-05 5.8E-10 81.9 10.0 114 202-328 536-651 (713)
152 PRK14502 bifunctional mannosyl 98.0 9.6E-05 2.1E-09 76.7 13.6 46 258-303 611-658 (694)
153 PLN02382 probable sucrose-phos 98.0 8.8E-05 1.9E-09 73.9 13.1 49 255-303 170-222 (413)
154 PRK12702 mannosyl-3-phosphogly 98.0 0.00016 3.5E-09 67.9 13.4 44 258-301 206-251 (302)
155 PLN02177 glycerol-3-phosphate 98.0 0.00015 3.3E-09 73.6 14.0 90 204-298 111-210 (497)
156 PRK14501 putative bifunctional 97.9 4.9E-05 1.1E-09 81.2 11.0 72 256-333 653-724 (726)
157 PF03767 Acid_phosphat_B: HAD 97.9 7.8E-06 1.7E-10 74.9 3.6 90 202-294 114-210 (229)
158 PF05116 S6PP: Sucrose-6F-phos 97.9 6.7E-05 1.4E-09 69.6 9.9 51 256-307 161-211 (247)
159 PF11019 DUF2608: Protein of u 97.9 0.00051 1.1E-08 63.8 15.3 103 202-306 80-212 (252)
160 TIGR01517 ATPase-IIB_Ca plasma 97.8 8.4E-05 1.8E-09 81.5 9.7 125 203-328 579-721 (941)
161 TIGR01524 ATPase-IIIB_Mg magne 97.8 9.9E-05 2.1E-09 80.2 10.1 122 203-328 515-654 (867)
162 TIGR01647 ATPase-IIIA_H plasma 97.8 7.1E-05 1.5E-09 80.2 8.7 119 203-326 442-584 (755)
163 PRK15122 magnesium-transportin 97.8 8.5E-05 1.8E-09 81.0 9.4 122 203-328 550-689 (903)
164 PRK10517 magnesium-transportin 97.8 8.8E-05 1.9E-09 80.8 9.3 123 202-328 549-689 (902)
165 PTZ00174 phosphomannomutase; P 97.8 9.7E-05 2.1E-09 68.4 8.3 46 254-303 182-231 (247)
166 TIGR01680 Veg_Stor_Prot vegeta 97.8 0.00057 1.2E-08 63.5 13.0 91 202-293 144-239 (275)
167 TIGR01523 ATPase-IID_K-Na pota 97.7 0.00014 3E-09 80.5 10.4 125 202-327 645-797 (1053)
168 TIGR01486 HAD-SF-IIB-MPGP mann 97.7 9.3E-05 2E-09 68.8 7.8 68 255-322 171-244 (256)
169 PLN02423 phosphomannomutase 97.6 0.00014 3.1E-09 67.3 7.2 47 255-306 184-234 (245)
170 COG3700 AphA Acid phosphatase 97.6 0.00025 5.4E-09 61.1 7.9 91 206-303 117-211 (237)
171 PLN02645 phosphoglycolate phos 97.6 0.00063 1.4E-08 65.3 11.4 90 203-301 44-136 (311)
172 PF03031 NIF: NLI interacting 97.6 2E-05 4.3E-10 67.8 0.4 84 202-289 35-119 (159)
173 COG4030 Uncharacterized protei 97.5 0.0011 2.4E-08 59.5 11.0 114 202-318 82-249 (315)
174 KOG0207 Cation transport ATPas 97.4 0.00072 1.6E-08 71.4 10.1 114 202-328 722-837 (951)
175 TIGR01652 ATPase-Plipid phosph 97.4 0.00028 6E-09 78.5 7.0 126 202-328 630-819 (1057)
176 TIGR01106 ATPase-IIC_X-K sodiu 97.4 0.00062 1.3E-08 75.2 9.6 125 203-328 568-736 (997)
177 PF05761 5_nucleotid: 5' nucle 97.3 0.0011 2.4E-08 66.3 9.9 102 202-303 182-324 (448)
178 COG2503 Predicted secreted aci 97.3 0.0017 3.7E-08 58.8 9.8 82 202-290 121-207 (274)
179 TIGR00685 T6PP trehalose-phosp 97.3 0.00044 9.6E-09 63.9 6.4 71 258-332 165-242 (244)
180 TIGR01484 HAD-SF-IIB HAD-super 97.3 0.00032 6.9E-09 62.7 4.7 47 255-301 158-204 (204)
181 COG0474 MgtA Cation transport 97.2 0.0015 3.3E-08 71.4 10.2 102 202-303 546-665 (917)
182 PLN03190 aminophospholipid tra 97.2 0.00055 1.2E-08 76.4 6.3 52 277-329 872-923 (1178)
183 KOG0202 Ca2+ transporting ATPa 97.2 0.0013 2.9E-08 68.8 8.6 125 202-327 583-729 (972)
184 COG4996 Predicted phosphatase 97.1 0.0017 3.7E-08 53.3 6.6 84 201-288 39-128 (164)
185 PF13344 Hydrolase_6: Haloacid 97.1 0.0039 8.5E-08 49.5 8.7 85 202-297 13-100 (101)
186 COG5663 Uncharacterized conser 97.0 0.0024 5.1E-08 54.6 6.8 95 205-312 74-170 (194)
187 PF08235 LNS2: LNS2 (Lipin/Ned 97.0 0.0065 1.4E-07 52.1 9.5 92 204-298 28-141 (157)
188 TIGR01494 ATPase_P-type ATPase 97.0 0.0051 1.1E-07 62.9 10.7 97 203-320 347-443 (499)
189 TIGR01689 EcbF-BcbF capsule bi 96.8 0.0068 1.5E-07 50.1 8.1 49 203-253 24-87 (126)
190 TIGR01657 P-ATPase-V P-type AT 96.6 0.014 3.1E-07 64.9 11.5 42 202-243 655-696 (1054)
191 TIGR02245 HAD_IIID1 HAD-superf 96.5 0.016 3.4E-07 51.7 8.9 84 202-290 44-143 (195)
192 PF05152 DUF705: Protein of un 96.5 0.011 2.3E-07 55.1 8.0 48 206-253 145-192 (297)
193 COG5610 Predicted hydrolase (H 96.4 0.0084 1.8E-07 58.9 7.1 101 202-302 98-201 (635)
194 TIGR01452 PGP_euk phosphoglyco 96.2 0.047 1E-06 51.4 10.6 88 203-300 18-108 (279)
195 KOG2470 Similar to IMP-GMP spe 96.0 0.019 4.2E-07 54.7 6.7 101 203-303 240-375 (510)
196 COG0647 NagD Predicted sugar p 95.9 0.068 1.5E-06 50.0 9.9 141 203-347 24-195 (269)
197 TIGR01486 HAD-SF-IIB-MPGP mann 95.8 0.022 4.7E-07 52.9 6.3 36 209-244 22-57 (256)
198 KOG0206 P-type ATPase [General 95.5 0.044 9.6E-07 60.5 8.2 49 275-324 793-841 (1151)
199 COG2216 KdpB High-affinity K+ 95.4 0.028 6E-07 56.3 5.7 91 203-304 447-537 (681)
200 KOG3107 Predicted haloacid deh 95.4 0.97 2.1E-05 43.8 15.6 79 222-307 373-455 (468)
201 KOG2961 Predicted hydrolase (H 95.3 0.18 3.8E-06 42.8 9.3 95 206-306 64-170 (190)
202 TIGR01484 HAD-SF-IIB HAD-super 95.2 0.046 1E-06 48.6 6.1 36 206-241 20-55 (204)
203 KOG0204 Calcium transporting A 95.1 0.096 2.1E-06 55.5 8.8 120 202-326 646-789 (1034)
204 KOG0210 P-type ATPase [Inorgan 94.9 0.027 5.9E-07 58.1 4.2 124 202-329 657-833 (1051)
205 PLN02499 glycerol-3-phosphate 94.9 0.22 4.7E-06 50.4 10.4 76 211-290 101-186 (498)
206 TIGR01457 HAD-SF-IIA-hyp2 HAD- 94.6 0.35 7.6E-06 44.7 10.4 140 203-346 17-182 (249)
207 TIGR01658 EYA-cons_domain eyes 94.5 0.19 4.1E-06 46.0 8.0 79 222-306 178-260 (274)
208 COG3769 Predicted hydrolase (H 93.8 0.29 6.2E-06 44.1 7.6 88 205-299 136-232 (274)
209 COG4502 5'(3')-deoxyribonucleo 93.7 0.15 3.3E-06 42.5 5.3 106 202-332 67-178 (180)
210 PF05822 UMPH-1: Pyrimidine 5' 93.0 0.18 3.8E-06 46.5 5.2 91 201-295 88-198 (246)
211 PRK10444 UMP phosphatase; Prov 92.8 0.97 2.1E-05 41.8 10.0 101 203-303 17-142 (248)
212 PLN02580 trehalose-phosphatase 92.7 0.29 6.4E-06 48.2 6.7 73 258-335 299-379 (384)
213 TIGR01458 HAD-SF-IIA-hyp3 HAD- 92.2 0.48 1E-05 44.1 7.2 50 203-252 21-73 (257)
214 KOG0203 Na+/K+ ATPase, alpha s 92.1 0.12 2.7E-06 54.7 3.3 113 202-318 589-746 (1019)
215 PLN02205 alpha,alpha-trehalose 91.0 0.67 1.4E-05 50.6 7.6 77 256-338 758-850 (854)
216 KOG2134 Polynucleotide kinase 91.0 0.79 1.7E-05 44.7 7.2 95 204-300 105-230 (422)
217 PLN02580 trehalose-phosphatase 90.6 0.47 1E-05 46.7 5.5 37 203-240 141-177 (384)
218 PF06189 5-nucleotidase: 5'-nu 90.4 2.2 4.7E-05 39.6 9.2 72 219-305 186-260 (264)
219 TIGR01460 HAD-SF-IIA Haloacid 89.8 3 6.6E-05 38.1 9.9 51 203-253 14-68 (236)
220 TIGR01670 YrbI-phosphatas 3-de 89.5 0.17 3.7E-06 43.2 1.3 14 118-131 1-14 (154)
221 TIGR02726 phenyl_P_delta pheny 88.3 0.26 5.6E-06 43.0 1.6 17 117-133 6-22 (169)
222 PLN03017 trehalose-phosphatase 87.6 1.1 2.3E-05 43.9 5.6 71 261-335 284-361 (366)
223 COG3882 FkbH Predicted enzyme 86.9 2.8 6.1E-05 42.2 8.0 85 208-297 260-348 (574)
224 PLN02151 trehalose-phosphatase 86.9 0.95 2.1E-05 44.1 4.7 72 261-337 270-349 (354)
225 PLN02205 alpha,alpha-trehalose 86.8 1.4 3E-05 48.2 6.4 36 205-240 618-654 (854)
226 PRK00192 mannosyl-3-phosphogly 83.7 1.9 4.2E-05 40.2 5.1 41 206-246 24-64 (273)
227 TIGR01456 CECR5 HAD-superfamil 83.5 3.4 7.3E-05 39.8 6.8 86 203-301 16-109 (321)
228 COG1778 Low specificity phosph 83.2 0.66 1.4E-05 39.6 1.5 17 117-133 7-23 (170)
229 PRK10513 sugar phosphate phosp 81.6 3.6 7.8E-05 38.1 6.1 42 203-244 20-61 (270)
230 KOG0209 P-type ATPase [Inorgan 81.5 4.3 9.4E-05 43.5 6.9 42 202-243 674-715 (1160)
231 PF06437 ISN1: IMP-specific 5' 81.1 8 0.00017 37.9 8.2 44 261-306 350-402 (408)
232 PF13344 Hydrolase_6: Haloacid 80.3 0.84 1.8E-05 36.0 1.1 17 121-137 1-17 (101)
233 TIGR02463 MPGP_rel mannosyl-3- 79.4 3.3 7.2E-05 37.1 4.9 36 208-243 21-56 (221)
234 TIGR02461 osmo_MPG_phos mannos 79.2 3.6 7.7E-05 37.4 5.0 39 206-244 18-56 (225)
235 COG0052 RpsB Ribosomal protein 78.5 36 0.00077 31.5 11.1 47 277-325 157-206 (252)
236 KOG2116 Protein involved in pl 76.9 6.2 0.00014 41.1 6.3 93 207-299 562-673 (738)
237 PRK01158 phosphoglycolate phos 76.7 4.2 9.1E-05 36.5 4.8 43 203-245 20-62 (230)
238 TIGR01487 SPP-like sucrose-pho 76.3 4 8.7E-05 36.4 4.5 42 204-245 19-60 (215)
239 PLN03063 alpha,alpha-trehalose 75.9 4 8.7E-05 44.3 5.1 38 203-240 532-570 (797)
240 PRK15126 thiamin pyrimidine py 75.4 4.7 0.0001 37.4 4.9 42 204-245 20-61 (272)
241 TIGR00099 Cof-subfamily Cof su 74.9 5.2 0.00011 36.7 5.0 41 204-244 17-57 (256)
242 KOG4549 Magnesium-dependent ph 74.8 15 0.00033 30.3 6.8 82 202-288 43-134 (144)
243 PLN03064 alpha,alpha-trehalose 74.8 5.5 0.00012 43.9 5.7 39 203-241 622-661 (934)
244 COG0561 Cof Predicted hydrolas 73.9 5.6 0.00012 36.7 4.9 43 203-245 20-62 (264)
245 PRK10976 putative hydrolase; P 73.8 5.5 0.00012 36.7 4.9 43 203-245 19-61 (266)
246 KOG3128 Uncharacterized conser 73.7 4.5 9.6E-05 37.4 4.0 94 202-295 137-247 (298)
247 KOG2882 p-Nitrophenyl phosphat 73.3 27 0.00058 33.2 9.1 93 202-303 37-132 (306)
248 PRK12702 mannosyl-3-phosphogly 72.8 6.3 0.00014 37.5 4.9 44 203-246 18-61 (302)
249 PRK10530 pyridoxal phosphate ( 72.6 6.3 0.00014 36.3 5.0 42 204-245 21-62 (272)
250 COG0731 Fe-S oxidoreductases [ 72.6 13 0.00028 35.3 6.9 48 200-253 89-137 (296)
251 TIGR01482 SPP-subfamily Sucros 71.7 6.6 0.00014 35.0 4.7 39 206-244 18-56 (225)
252 PF13580 SIS_2: SIS domain; PD 71.5 22 0.00047 29.5 7.5 97 207-303 23-137 (138)
253 KOG2469 IMP-GMP specific 5'-nu 71.1 8.5 0.00018 37.9 5.4 97 208-304 203-334 (424)
254 TIGR02468 sucrsPsyn_pln sucros 70.6 11 0.00024 41.9 6.9 72 231-304 924-1002(1050)
255 PLN02151 trehalose-phosphatase 69.9 11 0.00024 36.8 6.1 36 231-270 272-309 (354)
256 KOG0323 TFIIF-interacting CTD 69.8 8.4 0.00018 40.4 5.4 84 202-294 200-288 (635)
257 COG4850 Uncharacterized conser 68.5 24 0.00052 33.9 7.7 84 202-291 195-293 (373)
258 COG5083 SMP2 Uncharacterized p 66.9 4.6 0.0001 40.1 2.7 28 271-298 488-516 (580)
259 TIGR00685 T6PP trehalose-phosp 66.7 3.3 7.1E-05 38.0 1.6 14 118-131 3-16 (244)
260 PLN03017 trehalose-phosphatase 64.0 20 0.00044 35.2 6.5 47 231-284 286-334 (366)
261 PRK00994 F420-dependent methyl 62.5 83 0.0018 29.0 9.6 85 212-303 23-116 (277)
262 PRK03669 mannosyl-3-phosphogly 62.1 13 0.00028 34.6 4.7 38 206-243 27-64 (271)
263 PF02358 Trehalose_PPase: Treh 60.8 10 0.00022 34.4 3.8 63 258-320 163-233 (235)
264 KOG3040 Predicted sugar phosph 59.0 29 0.00064 31.3 6.0 40 204-243 24-66 (262)
265 PF04413 Glycos_transf_N: 3-De 58.4 12 0.00025 33.1 3.5 72 210-290 109-185 (186)
266 cd05007 SIS_Etherase N-acetylm 57.2 1.6E+02 0.0035 27.2 11.2 107 211-318 42-167 (257)
267 TIGR01668 YqeG_hyp_ppase HAD s 57.0 7.8 0.00017 33.4 2.2 18 116-133 23-40 (170)
268 cd04728 ThiG Thiazole synthase 55.2 1.4E+02 0.003 27.7 10.0 97 202-306 103-207 (248)
269 KOG1618 Predicted phosphatase 54.7 34 0.00075 32.8 6.1 19 119-137 36-54 (389)
270 PRK11840 bifunctional sulfur c 51.8 1.7E+02 0.0036 28.3 10.3 97 202-306 177-281 (326)
271 COG1877 OtsB Trehalose-6-phosp 50.0 10 0.00022 35.5 1.8 31 101-131 1-31 (266)
272 TIGR00236 wecB UDP-N-acetylglu 49.6 90 0.002 30.0 8.6 97 208-304 16-118 (365)
273 smart00577 CPDc catalytic doma 49.1 10 0.00023 31.8 1.7 15 119-133 3-17 (148)
274 TIGR01485 SPP_plant-cyano sucr 48.2 33 0.00072 31.3 5.0 39 206-244 24-62 (249)
275 COG4996 Predicted phosphatase 47.8 9.2 0.0002 31.8 1.0 13 120-132 2-14 (164)
276 PRK00208 thiG thiazole synthas 46.5 2.3E+02 0.005 26.3 10.0 97 202-306 103-207 (250)
277 PRK13762 tRNA-modifying enzyme 45.4 72 0.0016 30.7 7.0 30 201-230 140-169 (322)
278 PF03332 PMM: Eukaryotic phosp 45.3 28 0.0006 31.6 3.8 44 208-252 1-44 (220)
279 COG2099 CobK Precorrin-6x redu 44.6 1.5E+02 0.0033 27.6 8.5 97 204-305 113-231 (257)
280 PF02571 CbiJ: Precorrin-6x re 43.5 99 0.0021 28.6 7.3 118 202-327 112-246 (249)
281 PF10113 Fibrillarin_2: Fibril 43.5 49 0.0011 32.9 5.4 44 262-305 208-255 (505)
282 TIGR02329 propionate_PrpR prop 42.6 1.3E+02 0.0028 31.1 8.7 86 208-305 86-172 (526)
283 TIGR00715 precor6x_red precorr 42.5 2.8E+02 0.0061 25.7 11.1 61 263-330 187-253 (256)
284 PTZ00174 phosphomannomutase; P 40.8 42 0.0009 30.7 4.4 36 203-238 22-57 (247)
285 PF02593 dTMP_synthase: Thymid 40.5 42 0.00091 30.4 4.2 93 202-298 58-156 (217)
286 TIGR01858 tag_bisphos_ald clas 39.4 2.3E+02 0.0049 26.8 9.1 98 208-308 4-107 (282)
287 TIGR02244 HAD-IG-Ncltidse HAD 39.0 32 0.0007 33.5 3.5 19 116-134 10-28 (343)
288 PLN02887 hydrolase family prot 38.4 47 0.001 34.8 4.8 41 203-243 325-365 (580)
289 PRK14502 bifunctional mannosyl 38.4 51 0.0011 35.2 5.0 42 204-245 434-475 (694)
290 PF03603 DNA_III_psi: DNA poly 38.0 78 0.0017 26.1 5.1 106 214-326 8-113 (128)
291 KOG2832 TFIIF-interacting CTD 37.8 92 0.002 30.5 6.2 80 202-286 213-293 (393)
292 TIGR02251 HIF-SF_euk Dullard-l 37.7 17 0.00036 31.2 1.2 15 119-133 2-16 (162)
293 PF06014 DUF910: Bacterial pro 37.5 24 0.00051 25.3 1.7 25 265-293 7-31 (62)
294 PF02350 Epimerase_2: UDP-N-ac 37.2 94 0.002 30.2 6.5 118 214-337 2-127 (346)
295 TIGR02471 sucr_syn_bact_C sucr 37.2 68 0.0015 28.9 5.2 39 211-251 23-61 (236)
296 KOG1618 Predicted phosphatase 36.7 88 0.0019 30.2 5.8 87 202-301 50-144 (389)
297 TIGR03470 HpnH hopanoid biosyn 36.6 3.7E+02 0.0081 25.6 10.4 31 199-229 80-110 (318)
298 PRK10076 pyruvate formate lyas 36.5 1.2E+02 0.0026 27.3 6.5 36 203-238 50-88 (213)
299 PF05690 ThiG: Thiazole biosyn 36.1 3.5E+02 0.0077 24.9 9.4 96 202-304 103-205 (247)
300 PF14336 DUF4392: Domain of un 36.1 1.1E+02 0.0023 29.1 6.4 24 206-229 63-86 (291)
301 PRK06100 DNA polymerase III su 35.7 1.7E+02 0.0038 24.3 6.9 108 213-325 7-115 (132)
302 TIGR03151 enACPred_II putative 35.0 3.6E+02 0.0078 25.7 10.0 86 209-303 99-190 (307)
303 PRK15424 propionate catabolism 34.8 2E+02 0.0044 29.9 8.7 86 208-305 96-182 (538)
304 PF04413 Glycos_transf_N: 3-De 32.8 3.1E+02 0.0068 23.9 8.5 89 208-307 37-129 (186)
305 PF06506 PrpR_N: Propionate ca 32.1 49 0.0011 28.6 3.2 88 203-305 58-152 (176)
306 PRK07709 fructose-bisphosphate 31.5 3.2E+02 0.007 25.8 8.8 102 207-309 5-113 (285)
307 PRK14021 bifunctional shikimat 31.3 3.8E+02 0.0081 27.8 10.1 98 203-304 192-303 (542)
308 smart00052 EAL Putative diguan 31.2 1.8E+02 0.004 25.6 7.0 87 208-301 135-229 (241)
309 KOG3189 Phosphomannomutase [Li 30.8 40 0.00087 30.2 2.4 21 119-139 12-32 (252)
310 COG0191 Fba Fructose/tagatose 30.3 2.7E+02 0.0059 26.4 7.9 99 208-309 6-111 (286)
311 cd04732 HisA HisA. Phosphorib 29.8 4E+02 0.0087 23.7 9.1 66 235-304 153-220 (234)
312 PRK08610 fructose-bisphosphate 28.6 5.1E+02 0.011 24.5 9.9 101 207-308 5-112 (286)
313 cd01766 Ufm1 Urm1-like ubiquit 28.4 84 0.0018 23.3 3.3 42 256-297 23-64 (82)
314 TIGR02495 NrdG2 anaerobic ribo 28.2 1.2E+02 0.0025 26.3 5.0 30 202-231 73-102 (191)
315 TIGR03590 PseG pseudaminic aci 27.3 5.1E+02 0.011 24.0 12.2 104 208-322 20-127 (279)
316 PRK12737 gatY tagatose-bisphos 26.9 4.5E+02 0.0097 24.9 8.9 100 207-309 5-110 (284)
317 PRK11070 ssDNA exonuclease Rec 26.5 7.7E+02 0.017 25.9 12.1 110 204-318 51-173 (575)
318 PHA01735 hypothetical protein 25.7 2.2E+02 0.0047 20.9 4.9 52 180-231 7-58 (76)
319 PRK06856 DNA polymerase III su 25.7 3E+02 0.0065 22.7 6.6 105 214-325 7-111 (128)
320 PF03808 Glyco_tran_WecB: Glyc 25.3 3.5E+02 0.0076 23.2 7.4 74 208-286 37-111 (172)
321 COG0019 LysA Diaminopimelate d 25.3 2.5E+02 0.0054 27.9 7.2 34 273-306 93-128 (394)
322 PF05761 5_nucleotid: 5' nucle 25.2 81 0.0018 31.9 3.8 38 115-152 9-51 (448)
323 KOG0205 Plasma membrane H+-tra 24.4 2.2E+02 0.0047 30.4 6.6 97 203-299 492-607 (942)
324 TIGR02826 RNR_activ_nrdG3 anae 24.3 1.4E+02 0.0031 25.1 4.6 25 206-230 75-99 (147)
325 cd06533 Glyco_transf_WecG_TagA 24.1 3.2E+02 0.0069 23.4 6.9 74 208-286 35-109 (171)
326 smart00540 LEM in nuclear memb 24.1 82 0.0018 20.9 2.4 31 209-239 9-39 (44)
327 PRK03692 putative UDP-N-acetyl 24.1 2.9E+02 0.0063 25.4 7.0 73 208-286 94-167 (243)
328 COG4483 Uncharacterized protei 23.9 97 0.0021 22.4 2.9 26 265-294 7-32 (68)
329 PRK11303 DNA-binding transcrip 23.8 5.7E+02 0.012 23.7 9.3 21 207-227 166-187 (328)
330 TIGR03365 Bsubt_queE 7-cyano-7 23.5 84 0.0018 28.7 3.3 29 202-230 83-111 (238)
331 CHL00162 thiG thiamin biosynth 23.2 6.2E+02 0.013 23.7 9.5 97 202-305 117-220 (267)
332 PRK00748 1-(5-phosphoribosyl)- 23.2 5.3E+02 0.012 22.9 9.1 68 233-304 151-221 (233)
333 PF04358 DsrC: DsrC like prote 22.7 4E+02 0.0087 21.3 7.5 37 119-156 7-43 (109)
334 PRK15317 alkyl hydroperoxide r 22.6 3.4E+02 0.0075 27.7 8.0 98 203-303 129-241 (517)
335 KOG0780 Signal recognition par 22.2 4.9E+02 0.011 26.1 8.2 57 246-303 184-248 (483)
336 PRK12738 kbaY tagatose-bisphos 22.1 6.8E+02 0.015 23.7 9.2 98 208-308 6-109 (286)
337 TIGR03568 NeuC_NnaA UDP-N-acet 22.1 4.4E+02 0.0096 25.6 8.3 32 274-305 92-126 (365)
338 COG3769 Predicted hydrolase (H 22.0 1.3E+02 0.0029 27.5 4.1 35 209-243 29-63 (274)
339 TIGR00167 cbbA ketose-bisphosp 22.0 6.8E+02 0.015 23.7 9.9 100 207-308 5-112 (288)
340 PRK13938 phosphoheptose isomer 21.8 5.6E+02 0.012 22.6 9.0 108 210-318 36-162 (196)
341 PF08484 Methyltransf_14: C-me 21.7 82 0.0018 27.0 2.7 46 207-254 56-102 (160)
342 PRK08304 stage V sporulation p 21.4 1.7E+02 0.0037 28.4 4.9 67 238-304 30-109 (337)
343 PF10307 DUF2410: Hypothetical 21.3 5.9E+02 0.013 22.7 8.6 85 208-295 59-152 (197)
344 COG3882 FkbH Predicted enzyme 21.0 54 0.0012 33.4 1.5 18 114-131 218-235 (574)
345 PF04007 DUF354: Protein of un 20.6 3E+02 0.0065 26.7 6.6 89 209-306 17-113 (335)
346 PRK07084 fructose-bisphosphate 20.6 7.7E+02 0.017 23.8 9.2 101 207-308 11-120 (321)
347 KOG0208 Cation transport ATPas 20.4 2.6E+02 0.0057 31.2 6.5 45 202-246 704-748 (1140)
348 cd01948 EAL EAL domain. This d 20.4 3E+02 0.0064 24.2 6.3 87 208-301 134-228 (240)
No 1
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=100.00 E-value=1.1e-80 Score=599.62 Aligned_cols=368 Identities=80% Similarity=1.285 Sum_probs=348.2
Q ss_pred CCCCCCCCCcccCCCccccCCcccCCchhcccceeeeccC-CCCccccccccchhhHhhhhhcccccchhhhccCCCccc
Q 043738 1 HPPLCQGIPVRDLSSKKKFPDCCRFPVTEFLGRRIVNYCP-PPRMKLSRSINKSINALAMELTKETYSFREEEKIPLDWR 79 (368)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (368)
|||+|+|++++|.|+||+++.+||||+++|.|+|+|++++ ++|+|++|+++++||||||++|||++||||+++||+.|+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (381)
T PLN02575 13 HRPLCGRLSVKDESYRRKSQSSCRFPVKEFVGRRLVASSPMLQRVKKDRLVVTSIKALAMELTKEAYSYREEERIPRTWN 92 (381)
T ss_pred cccccccccccchhhhhhccccccCccHHhhccceeeccccccccccCceeeeeHHHHHHHHhhhhcccchhhcCCCccc
Confidence 8999999999999999999999999999999999999998 888899999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCCChhhhhcccCCCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHH
Q 043738 80 YQIDTGVDRKPGLWPPENKADNPSLHNPLLRQERMGCGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILR 159 (368)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~ 159 (368)
++.++|++++|..|||+|++++++++||+.|+++|+++|++|||||||||+|+...++..+|.++++++|.........+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G~~~~~~e~~~ 172 (381)
T PLN02575 93 YRLDTGADRKPGLWPPENRADNPSLHNPLLRQERMGCGWLGAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSPPPAFILR 172 (381)
T ss_pred cccccCCCCCCCCCCCCCccccccccCHHHHHHhccCCCCEEEEcCcCcceeCHHHHHHHHHHHHHHHcCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998877888899999999999887777778
Q ss_pred HHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHH
Q 043738 160 RIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDS 239 (368)
Q Consensus 160 ~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~ 239 (368)
.+.|++..+.+..++.+......+..+...+.+.|.........++||+.++|+.|+++|++++|+||+....++..+++
T Consensus 173 ~~~G~~~~~~l~~ll~~~~~~~~~e~l~~~~~~~y~~~~~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~ 252 (381)
T PLN02575 173 RVEGMKNEQAISEVLCWSRDPAELRRMATRKEEIYQALQGGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGS 252 (381)
T ss_pred HhcCCCHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHhccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH
Confidence 89999999998888776556677788888888888877766578999999999999999999999999999999999999
Q ss_pred cCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEc
Q 043738 240 IGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVR 319 (368)
Q Consensus 240 ~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~ 319 (368)
+|+..||+.+++++++...||++++|..+++++|+.|++|++|||+.+|+++|+++||.+|++.+++...++..++++++
T Consensus 253 lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~ 332 (381)
T PLN02575 253 IGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVR 332 (381)
T ss_pred cCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999997666666666999999
Q ss_pred CchhhhHHHHhccccccccccCCCCCCcchhhhhcCCCCCCccccccCC
Q 043738 320 HLDELSVVDLKNLADIESTEFGSVEPEMEVEEEEEGYPSSLTTVDDIFW 368 (368)
Q Consensus 320 sl~eL~~~~l~~L~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (368)
++.||....+++|.++++++||+||||+|||+||++.+||+|||||+||
T Consensus 333 s~~EL~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (381)
T PLN02575 333 RLDELSIVDLKNLADIESPEFGPPEPELEMEKEEDRELPSSAGVDDIFW 381 (381)
T ss_pred CHHHHHHHHHhhhhhcCccccCCCCCccccccccccCCCcccccccccC
Confidence 9999999999999999999999999999999999999999999999999
No 2
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=100.00 E-value=3.3e-42 Score=320.87 Aligned_cols=259 Identities=66% Similarity=1.141 Sum_probs=229.5
Q ss_pred CCCCCCCCCCChhhhhcccCCCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHh
Q 043738 96 ENKADNPSLHNPLLRQERMGCGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLC 175 (368)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~ 175 (368)
.-++++.++.||+.++.+.++.+++|||||||||+|+...++..+|.++++++|+........+.+.|.+....+..++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~G~~~~~~e~~~~~~G~~~~~~~~~l~~ 81 (260)
T PLN03243 2 RDRADDLSLNNPLLRQHRLGCGWLGVVLEWEGVIVEDDSELERKAWRALAEEEGKRPPPAFLLKRAEGMKNEQAISEVLC 81 (260)
T ss_pred cccccchhhcCHHHHHHHhcCCceEEEEeCCCceeCCchHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHhc
Confidence 45679999999999999999999999999999999987678888999999999998877777778899998888887766
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCC
Q 043738 176 WSRDPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDV 255 (368)
Q Consensus 176 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v 255 (368)
+.........+...+...+.........++||+.++|+.|+++|++++|+||+....+...++++|+..||+.+++++++
T Consensus 82 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~ 161 (260)
T PLN03243 82 WSRDFLQMKRLAIRKEDLYEYMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDV 161 (260)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccC
Confidence 54455556666666666665444445688999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchhhhHHHHhccccc
Q 043738 256 HRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDELSVVDLKNLADI 335 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~l~~L~d~ 335 (368)
..+||+|++|..+++++|+.|++|++|||+.+|+++|+++||.+|++.+......+..+++++.++.++....+++|+|+
T Consensus 162 ~~~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~~~el~~~~~~~~~~~ 241 (260)
T PLN03243 162 YRGKPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRRLDDLSVVDLKNLSDL 241 (260)
T ss_pred CCCCCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCCHHHHHHHHHhhhhcc
Confidence 99999999999999999999999999999999999999999999999865555556669999999999999999999999
Q ss_pred cccccCCCCCCcchhhhhc
Q 043738 336 ESTEFGSVEPEMEVEEEEE 354 (368)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~ 354 (368)
.++||+.|||.+|.|.||+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~ 260 (260)
T PLN03243 242 DSPEFQIPEPQLEEEVEEE 260 (260)
T ss_pred CCccccCcchHHHHHhhcC
Confidence 9999999999999766653
No 3
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.97 E-value=1.5e-29 Score=234.65 Aligned_cols=206 Identities=19% Similarity=0.341 Sum_probs=169.2
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCC----CCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGK----SPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEE 192 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~----~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~ 192 (368)
++++|||||||||+|+. ..+..+|.++++++|. ......+...+.|.+..+.+..++.. .......+...+..
T Consensus 21 ~~k~viFDlDGTLiDs~-~~~~~a~~~~~~~~g~~~g~~~~~~~~~~~~~G~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 97 (248)
T PLN02770 21 PLEAVLFDVDGTLCDSD-PLHYYAFREMLQEINFNGGVPITEEFFVENIAGKHNEDIALGLFPD--DLERGLKFTDDKEA 97 (248)
T ss_pred ccCEEEEcCCCccCcCH-HHHHHHHHHHHHHhccccCCCCCHHHHHHHcCCCCHHHHHHHHcCc--chhhHHHHHHHHHH
Confidence 47899999999999876 5667889999999864 34444445666788877777665532 12222233444555
Q ss_pred HHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHc
Q 043738 193 IYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLL 272 (368)
Q Consensus 193 ~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~l 272 (368)
.|.........++||+.++|+.|+++|++++|+||+....++..++++|+..||+.+++++++...||+|++|..+++++
T Consensus 98 ~y~~~~~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~ 177 (248)
T PLN02770 98 LFRKLASEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVL 177 (248)
T ss_pred HHHHHHHhcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCCCCCChHHHHHHHHHh
Confidence 66665555578999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCcccc--CCCcEEEcCchhhh
Q 043738 273 KFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYEL--GAADLVVRHLDELS 325 (368)
Q Consensus 273 gi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~--~~ad~vv~sl~eL~ 325 (368)
|++|++|++|||+.+|+++|+++|+.+|++.++.....+ ..++++++++.++.
T Consensus 178 ~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~e~~ 232 (248)
T PLN02770 178 KVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYEDPK 232 (248)
T ss_pred CCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccchhhH
Confidence 999999999999999999999999999999865443332 25999999999965
No 4
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.97 E-value=4.9e-29 Score=231.73 Aligned_cols=209 Identities=20% Similarity=0.242 Sum_probs=167.1
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHH-------------HhcCCCHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEV-------------LCWSRDPAELR 184 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~-------------l~~~~~~~~~~ 184 (368)
+++|||||||||+|+.......++.++++++|...+...+ ....|.+....+... +........+.
T Consensus 2 ~k~viFD~DGTLiDs~~~~~~~a~~~~~~~~g~~~~~~~~-~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (253)
T TIGR01422 2 IEAVIFDWAGTTVDFGSFAPTQAFVEAFAEFGVQITLEEA-RGPMGLGKWDHIRALLKMPAVAERWRAKFGRLPTEADIE 80 (253)
T ss_pred ceEEEEeCCCCeecCCCccHHHHHHHHHHHcCCCccHHHH-HHhcCccHHHHHHHHhcCHHHHHHHHHHhCCCCCHHHHH
Confidence 6899999999999975433457889999999987666553 445666654443332 12223444555
Q ss_pred HHHHHHHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccc-cEEEeCCCCCCCCCCHH
Q 043738 185 RMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYF-TAIVAAEDVHRGKPDPE 263 (368)
Q Consensus 185 ~l~~~~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~F-d~iv~~e~v~~~KP~~~ 263 (368)
.+...+.+.+.........++||+.++|+.|+++|++++|+||+....++..++++|+..+| +.+++++++...||+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~p~ 160 (253)
T TIGR01422 81 AIYEAFEPLQLAKLAEYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPAGRPAPW 160 (253)
T ss_pred HHHHHHHHHHHHHHHhcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCCCCCCHH
Confidence 66666666655555455789999999999999999999999999999999999999999986 99999999999999999
Q ss_pred HHHHHHHHcCCC-CCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCc------------------------ccc--CCCcE
Q 043738 264 MFVYAAQLLKFI-PERCIVFGNSNQTVEAAHDARMKCVAVASKHPV------------------------YEL--GAADL 316 (368)
Q Consensus 264 ~~~~~le~lgi~-p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~------------------------~~~--~~ad~ 316 (368)
+|..+++++|+. |++|++|||+.+|+++|+++||.+|+|.++... .++ ..||+
T Consensus 161 ~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 240 (253)
T TIGR01422 161 MALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTVGLILSSNELGLSEEEYRALDPAELEARRAEATARLKAAGAHY 240 (253)
T ss_pred HHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHHHHHHHhcCCCE
Confidence 999999999995 999999999999999999999999999865431 122 24999
Q ss_pred EEcCchhhhHH
Q 043738 317 VVRHLDELSVV 327 (368)
Q Consensus 317 vv~sl~eL~~~ 327 (368)
+++++.||...
T Consensus 241 v~~~~~el~~~ 251 (253)
T TIGR01422 241 VIDTLAELPAV 251 (253)
T ss_pred ehhcHHHHHHh
Confidence 99999998643
No 5
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.97 E-value=6.8e-29 Score=225.01 Aligned_cols=204 Identities=21% Similarity=0.316 Sum_probs=168.2
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCC-CCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKS-PPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQ 195 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~-~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~ 195 (368)
++++|+||+||||+|+. ..+..+|.+++++++.. .+... +....|.+..+.+..+ .+.....+...+.+.+.
T Consensus 2 ~~~~viFD~DGTL~ds~-~~~~~a~~~~~~~~~~~~~~~~~-~~~~~G~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 74 (214)
T PRK13288 2 KINTVLFDLDGTLINTN-ELIISSFLHTLKTYYPNQYKRED-VLPFIGPSLHDTFSKI-----DESKVEEMITTYREFNH 74 (214)
T ss_pred CccEEEEeCCCcCccCH-HHHHHHHHHHHHHhCCCCCCHHH-HHHHhCcCHHHHHHhc-----CHHHHHHHHHHHHHHHH
Confidence 37899999999999876 46678899999998765 34444 4566787776666543 23445555555665555
Q ss_pred HHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 043738 196 ALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFI 275 (368)
Q Consensus 196 ~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~ 275 (368)
........++||+.++|+.|+++|++++|+||+....+...++.+|+..+|+.+++++++...||++++|..++++++++
T Consensus 75 ~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~ 154 (214)
T PRK13288 75 EHHDELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAK 154 (214)
T ss_pred HhhhhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCC
Confidence 44444468999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCC-cccc--CCCcEEEcCchhhhHH
Q 043738 276 PERCIVFGNSNQTVEAAHDARMKCVAVASKHP-VYEL--GAADLVVRHLDELSVV 327 (368)
Q Consensus 276 p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~-~~~~--~~ad~vv~sl~eL~~~ 327 (368)
|++|++|||+.+|+++|+++|+.+|++.++.. ..++ ..++++++++.++...
T Consensus 155 ~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~~~ 209 (214)
T PRK13288 155 PEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSDLLAI 209 (214)
T ss_pred HHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECCHHHHHHH
Confidence 99999999999999999999999999986543 2222 3499999999998654
No 6
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.97 E-value=1.5e-28 Score=225.39 Aligned_cols=207 Identities=18% Similarity=0.243 Sum_probs=169.3
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQAL 197 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~ 197 (368)
+++|||||||||+|+. ..+..++..+++++|.............|.+....+..... ........++...+.+.|...
T Consensus 12 ~k~viFD~DGTL~Ds~-~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 89 (229)
T PRK13226 12 PRAVLFDLDGTLLDSA-PDMLATVNAMLAARGRAPITLAQLRPVVSKGARAMLAVAFP-ELDAAARDALIPEFLQRYEAL 89 (229)
T ss_pred CCEEEEcCcCccccCH-HHHHHHHHHHHHHCCCCCCCHHHHHHHhhhHHHHHHHHHhc-cCChHHHHHHHHHHHHHHHHh
Confidence 5899999999999876 56678999999999986433344566667666665554432 123444556666666667665
Q ss_pred HCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 043738 198 QGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPE 277 (368)
Q Consensus 198 ~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~ 277 (368)
......++||+.++|+.|+++|++++++||+....+...++++|+..+|+.+++++++...||+|++|..+++++|++|+
T Consensus 90 ~~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~ 169 (229)
T PRK13226 90 IGTQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPT 169 (229)
T ss_pred hhhcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChh
Confidence 55556899999999999999999999999999999999999999999999999999888999999999999999999999
Q ss_pred cEEEEcCCHhhHHHHHHcCCeEEEEcCCCC-c-cc--cCCCcEEEcCchhhhH
Q 043738 278 RCIVFGNSNQTVEAAHDARMKCVAVASKHP-V-YE--LGAADLVVRHLDELSV 326 (368)
Q Consensus 278 ~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~-~-~~--~~~ad~vv~sl~eL~~ 326 (368)
+|++|||+.+|+++|+++|+.+|++.++.. . .. ...++++++++.+|..
T Consensus 170 ~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el~~ 222 (229)
T PRK13226 170 DCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLLWN 222 (229)
T ss_pred hEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHHHH
Confidence 999999999999999999999999985542 2 11 2349999999999853
No 7
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.97 E-value=1.1e-28 Score=225.03 Aligned_cols=211 Identities=23% Similarity=0.346 Sum_probs=168.7
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCC-CHHHHHHHHHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSR-DPAELRRMASRMEEIYQ 195 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~~~~~~l~~~~~~~~~ 195 (368)
.+++|+||+||||+|+. ..+..++.++++++|........+....|.........+..... ...........+.+.+.
T Consensus 6 ~~k~iiFD~DGTL~d~~-~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (222)
T PRK10826 6 QILAAIFDMDGLLIDSE-PLWDRAELDVMASLGVDISRREELPDTLGLRIDQVVDLWYARQPWNGPSRQEVVQRIIARVI 84 (222)
T ss_pred cCcEEEEcCCCCCCcCH-HHHHHHHHHHHHHCCCCCCHHHHHHHhhCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence 48999999999999865 56678888999999987766455667777776665554432211 11112233333333344
Q ss_pred HHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 043738 196 ALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFI 275 (368)
Q Consensus 196 ~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~ 275 (368)
........++||+.++|+.|+++|++++++||+....++..++.+++..+|+.++++++++.+||++++|..+++++|+.
T Consensus 85 ~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~ 164 (222)
T PRK10826 85 SLIEETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVD 164 (222)
T ss_pred HHHhcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCC
Confidence 44444468999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccc--cCCCcEEEcCchhhhHHH
Q 043738 276 PERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYE--LGAADLVVRHLDELSVVD 328 (368)
Q Consensus 276 p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~--~~~ad~vv~sl~eL~~~~ 328 (368)
|++|++|||+.+|+++|+++|+++|++..+....+ ...+++++.++.|+....
T Consensus 165 ~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl~~~~ 219 (222)
T PRK10826 165 PLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLESLTELTAAD 219 (222)
T ss_pred HHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccCHHHHhhhh
Confidence 99999999999999999999999999996654332 234899999999986554
No 8
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.97 E-value=1.6e-28 Score=221.84 Aligned_cols=205 Identities=19% Similarity=0.348 Sum_probs=168.7
Q ss_pred EEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHH
Q 043738 121 AIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWS---RDPAELRRMASRMEEIYQAL 197 (368)
Q Consensus 121 VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~---~~~~~~~~l~~~~~~~~~~~ 197 (368)
|||||||||+|+.. .+..++..+++++|........+....|......+..++... .+......+.+.+.+.|...
T Consensus 1 viFD~DGTL~Ds~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (213)
T TIGR01449 1 VLFDLDGTLVDSAP-DIAAAVNMALAALGLPPATLARVIGFIGNGVPVLMERVLAWAGQEPDAQRVAELRKLFDRHYEEV 79 (213)
T ss_pred CeecCCCccccCHH-HHHHHHHHHHHHCCCCCCCHHHHHHHhcccHHHHHHHHhhccccccChHHHHHHHHHHHHHHHHh
Confidence 69999999998764 455788999999998643333355667877766666655322 23444566666777777766
Q ss_pred HCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 043738 198 QGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPE 277 (368)
Q Consensus 198 ~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~ 277 (368)
......++||+.++|+.|+++|++++|+||+....++..++++|+..+|+.+++++++...||++++|..+++++|++|+
T Consensus 80 ~~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~ 159 (213)
T TIGR01449 80 AGELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQ 159 (213)
T ss_pred ccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChh
Confidence 55557899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEcCCHhhHHHHHHcCCeEEEEcCCCC-cccc--CCCcEEEcCchhhhH
Q 043738 278 RCIVFGNSNQTVEAAHDARMKCVAVASKHP-VYEL--GAADLVVRHLDELSV 326 (368)
Q Consensus 278 ~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~-~~~~--~~ad~vv~sl~eL~~ 326 (368)
+|++|||+.+|+++|+++|+.+|++.++.. ...+ ..|+++++++.+|..
T Consensus 160 ~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l~~ 211 (213)
T TIGR01449 160 QMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLNELPP 211 (213)
T ss_pred HeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCCHHHHHh
Confidence 999999999999999999999999985443 2222 349999999999854
No 9
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.96 E-value=2.9e-28 Score=221.63 Aligned_cols=209 Identities=22% Similarity=0.297 Sum_probs=173.5
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWS-RDPAELRRMASRMEEIYQA 196 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~l~~~~~~~~~~ 196 (368)
+++|||||||||+|+. ..+..+|.++++++|......+..+.+.|....+.+..++... ........+...+.+.+..
T Consensus 1 ~k~iiFD~DGTL~ds~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (220)
T TIGR03351 1 ISLVVLDMAGTTVDED-GLVYRALRQAVTAAGLSPTPEEVQSAWMGQSKIEAIRALLALDGADEAEAQAAFADFEERLAE 79 (220)
T ss_pred CcEEEEecCCCeeccC-chHHHHHHHHHHHcCCCCCHHHHHHhhcCCCHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHH
Confidence 5789999999999876 4667889999999999877766655577888887777766432 2344556666666666665
Q ss_pred HHC-CccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcc--ccccEEEeCCCCCCCCCCHHHHHHHHHHcC
Q 043738 197 LQG-GIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIE--EYFTAIVAAEDVHRGKPDPEMFVYAAQLLK 273 (368)
Q Consensus 197 ~~~-~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~--~~Fd~iv~~e~v~~~KP~~~~~~~~le~lg 273 (368)
... ....++||+.++|+.|+++|++++++||+....+...++++|+. .+|+.++++++....||+|++|..+++++|
T Consensus 80 ~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~ 159 (220)
T TIGR03351 80 AYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTG 159 (220)
T ss_pred HhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcC
Confidence 543 23589999999999999999999999999999999999999998 999999999999999999999999999999
Q ss_pred CC-CCcEEEEcCCHhhHHHHHHcCCeE-EEEcCCC-Ccccc--CCCcEEEcCchhhhHH
Q 043738 274 FI-PERCIVFGNSNQTVEAAHDARMKC-VAVASKH-PVYEL--GAADLVVRHLDELSVV 327 (368)
Q Consensus 274 i~-p~~~l~IGDs~nDl~~A~~aG~~~-I~v~~~~-~~~~~--~~ad~vv~sl~eL~~~ 327 (368)
+. |++|++|||+.+|+++|+++||.+ |++..+. ....+ ..+++++.++.+|...
T Consensus 160 ~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l~~~ 218 (220)
T TIGR03351 160 VQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDSVADLPAL 218 (220)
T ss_pred CCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecCHHHHHHh
Confidence 97 799999999999999999999999 8887543 33222 3489999999988543
No 10
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.96 E-value=3.1e-28 Score=228.26 Aligned_cols=211 Identities=18% Similarity=0.215 Sum_probs=167.5
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHH-------------HhcCCCHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEV-------------LCWSRDPAEL 183 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~-------------l~~~~~~~~~ 183 (368)
.+++|||||||||+|+.......+|.++++++|...+... .....|.+....+..+ ++........
T Consensus 3 ~~k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~g~~~~~~~-~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 81 (267)
T PRK13478 3 KIQAVIFDWAGTTVDFGSFAPTQAFVEAFAQFGVEITLEE-ARGPMGLGKWDHIRALLKMPRVAARWQAVFGRLPTEADV 81 (267)
T ss_pred ceEEEEEcCCCCeecCCCccHHHHHHHHHHHcCCCCCHHH-HHHhcCCCHHHHHHHHHhcHHHHHHHHHHhCCCCCHHHH
Confidence 4899999999999997543335789999999998766555 3555676654433332 2222234445
Q ss_pred HHHHHHHHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccc-cEEEeCCCCCCCCCCH
Q 043738 184 RRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYF-TAIVAAEDVHRGKPDP 262 (368)
Q Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~F-d~iv~~e~v~~~KP~~ 262 (368)
..+...+.+.+.........++||+.++|+.|+++|++++|+||.....+...++.+++..+| +.+++++++...||+|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p 161 (267)
T PRK13478 82 DALYAAFEPLQIAKLADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYP 161 (267)
T ss_pred HHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCCh
Confidence 555555666655555555689999999999999999999999999999999999999988875 8999999999999999
Q ss_pred HHHHHHHHHcCCC-CCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCc------------------------ccc--CCCc
Q 043738 263 EMFVYAAQLLKFI-PERCIVFGNSNQTVEAAHDARMKCVAVASKHPV------------------------YEL--GAAD 315 (368)
Q Consensus 263 ~~~~~~le~lgi~-p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~------------------------~~~--~~ad 315 (368)
++|..+++++|+. +++|++|||+.+|+++|+++|+.+|+|.++... ..+ ..|+
T Consensus 162 ~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~ 241 (267)
T PRK13478 162 WMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGAH 241 (267)
T ss_pred HHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999996 699999999999999999999999999865431 222 3499
Q ss_pred EEEcCchhhhHHH
Q 043738 316 LVVRHLDELSVVD 328 (368)
Q Consensus 316 ~vv~sl~eL~~~~ 328 (368)
++++++.+|...+
T Consensus 242 ~vi~~~~~l~~~l 254 (267)
T PRK13478 242 YVIDTIADLPAVI 254 (267)
T ss_pred eehhhHHHHHHHH
Confidence 9999999997654
No 11
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.96 E-value=5.7e-28 Score=220.14 Aligned_cols=210 Identities=24% Similarity=0.388 Sum_probs=173.3
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQA 196 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (368)
.++.|+||+||||+|+... ...+++.+++++|.........+.+.|......+...+......... .....+.+.|..
T Consensus 3 ~~~~iiFDlDGTL~Ds~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 80 (220)
T COG0546 3 MIKAILFDLDGTLVDSAED-ILRAFNAALAELGLPPLDEEEIRQLIGLGLDELIERLLGEADEEAAA-ELVERLREEFLT 80 (220)
T ss_pred CCCEEEEeCCCccccChHH-HHHHHHHHHHHcCCCCCCHHHHHHHhcCCHHHHHHHHhccccchhHH-HHHHHHHHHHHH
Confidence 4789999999999997654 44778899999999855555578888999888888776544444322 333334444433
Q ss_pred HHCCc--cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCC
Q 043738 197 LQGGI--YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKF 274 (368)
Q Consensus 197 ~~~~~--~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi 274 (368)
..... ..++||+.++|..|++.|++++|+||.+...+...++++|+..+|+.++++++....||+|..+..+++++|+
T Consensus 81 ~~~~~~~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~ 160 (220)
T COG0546 81 AYAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGL 160 (220)
T ss_pred HHHhhccCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCC
Confidence 33332 5899999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred CCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCC---ccccCCCcEEEcCchhhhHHH
Q 043738 275 IPERCIVFGNSNQTVEAAHDARMKCVAVASKHP---VYELGAADLVVRHLDELSVVD 328 (368)
Q Consensus 275 ~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~---~~~~~~ad~vv~sl~eL~~~~ 328 (368)
+|++++||||+.+|++||+++|+.+|+|.++.. ......+|+++.++.||...+
T Consensus 161 ~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~l 217 (220)
T COG0546 161 DPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLALL 217 (220)
T ss_pred ChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHHH
Confidence 988999999999999999999999999997653 233345999999999997554
No 12
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.96 E-value=9e-28 Score=218.82 Aligned_cols=216 Identities=23% Similarity=0.363 Sum_probs=180.6
Q ss_pred CCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhc---CCCHHHHHHHHHHHHH
Q 043738 116 CGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCW---SRDPAELRRMASRMEE 192 (368)
Q Consensus 116 ~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~---~~~~~~~~~l~~~~~~ 192 (368)
.++++|+||+||||+|+.. ....++..+++++|........+....|......+...+.+ .........+...+.+
T Consensus 4 ~~~~~iiFD~DGTL~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (226)
T PRK13222 4 MDIRAVAFDLDGTLVDSAP-DLAAAVNAALAALGLPPAGEERVRTWVGNGADVLVERALTWAGREPDEELLEKLRELFDR 82 (226)
T ss_pred CcCcEEEEcCCcccccCHH-HHHHHHHHHHHHCCCCCCCHHHHHHHhCccHHHHHHHHHhhccCCccHHHHHHHHHHHHH
Confidence 3589999999999998654 55678899999999875444455677787777766665543 3455667777777777
Q ss_pred HHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHc
Q 043738 193 IYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLL 272 (368)
Q Consensus 193 ~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~l 272 (368)
.|.........++||+.++|+.+++.|++++++||+....+..+++++|+..+|+.+++++++...||++++|..+++++
T Consensus 83 ~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~ 162 (226)
T PRK13222 83 HYAENVAGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKL 162 (226)
T ss_pred HHHHhccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCCCCcChHHHHHHHHHc
Confidence 77776655568999999999999999999999999999999999999999999999999999989999999999999999
Q ss_pred CCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCC-ccc--cCCCcEEEcCchhhhHHHHhcc
Q 043738 273 KFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHP-VYE--LGAADLVVRHLDELSVVDLKNL 332 (368)
Q Consensus 273 gi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~-~~~--~~~ad~vv~sl~eL~~~~l~~L 332 (368)
++++++|++|||+.+|+++|+++|+.+|++.++.. ..+ ...++++++++.+|...+.+.|
T Consensus 163 ~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~l~~~~ 225 (226)
T PRK13222 163 GLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLPLLGLAL 225 (226)
T ss_pred CCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHHHHHHHHhc
Confidence 99999999999999999999999999999985543 222 2359999999999988876665
No 13
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.96 E-value=1.2e-27 Score=224.69 Aligned_cols=224 Identities=19% Similarity=0.276 Sum_probs=178.9
Q ss_pred CCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhc-----CCCHHHHHHHHHHH
Q 043738 116 CGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCW-----SRDPAELRRMASRM 190 (368)
Q Consensus 116 ~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~-----~~~~~~~~~l~~~~ 190 (368)
+-+++|||||||||+|+. ..+..++..+++++|...........+.|.+..+.....+.. ..+......+...+
T Consensus 11 ~~~k~viFDlDGTL~Ds~-~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 89 (272)
T PRK13223 11 RLPRLVMFDLDGTLVDSV-PDLAAAVDRMLLELGRPPAGLEAVRHWVGNGAPVLVRRALAGSIDHDGVDDELAEQALALF 89 (272)
T ss_pred ccCCEEEEcCCCccccCH-HHHHHHHHHHHHHcCCCCCCHHHHHHHhChhHHHHHHHHhcccccccCCCHHHHHHHHHHH
Confidence 347899999999999865 566688999999999876544445667777766665554321 22344555665666
Q ss_pred HHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHH
Q 043738 191 EEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQ 270 (368)
Q Consensus 191 ~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le 270 (368)
.+.|.... ....++||+.++|+.|++.|++++++||.+...+...++++++..+|+.+++++++...||++++|..+++
T Consensus 90 ~~~~~~~~-~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~ 168 (272)
T PRK13223 90 MEAYADSH-ELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMK 168 (272)
T ss_pred HHHHHhcC-cCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHH
Confidence 66555422 23578999999999999999999999999999999999999999999999999999889999999999999
Q ss_pred HcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCC-Ccccc--CCCcEEEcCchhhhHHHHhccccccccccC
Q 043738 271 LLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKH-PVYEL--GAADLVVRHLDELSVVDLKNLADIESTEFG 341 (368)
Q Consensus 271 ~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~-~~~~~--~~ad~vv~sl~eL~~~~l~~L~d~~~~~~~ 341 (368)
++|+++++|++|||+.+|+++|+++||.++++..+. ....+ ..++++++++.+|...+....+++..+..+
T Consensus 169 ~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~~~~~~~~~~~~~~~~~ 242 (272)
T PRK13223 169 MAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDDLRALLPGCADPAAEITLPDLQ 242 (272)
T ss_pred HhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECCHHHHHHHHhcccccccccccC
Confidence 999999999999999999999999999999998643 33332 359999999999986655555555555555
No 14
>PRK11587 putative phosphatase; Provisional
Probab=99.96 E-value=7.4e-28 Score=219.00 Aligned_cols=203 Identities=25% Similarity=0.403 Sum_probs=160.2
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQA 196 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (368)
.+++|||||||||+|+. ..+..+|.++++++|++. ......+.|.+....+..+... .....+......+. .+..
T Consensus 2 ~~k~viFDlDGTL~Ds~-~~~~~a~~~~~~~~g~~~--~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~ 76 (218)
T PRK11587 2 RCKGFLFDLDGTLVDSL-PAVERAWSNWADRHGIAP--DEVLNFIHGKQAITSLRHFMAG-ASEAEIQAEFTRLE-QIEA 76 (218)
T ss_pred CCCEEEEcCCCCcCcCH-HHHHHHHHHHHHHcCCCH--HHHHHHHcCCCHHHHHHHHhcc-CCcHHHHHHHHHHH-HHHH
Confidence 37899999999999865 566789999999999853 3445566688777776665431 22222222222111 1222
Q ss_pred HHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 043738 197 LQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIP 276 (368)
Q Consensus 197 ~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p 276 (368)
.......++||+.++|+.|+++|++++++||+....+...++..++ .+|+.+++++++...||+|++|..+++++|+.|
T Consensus 77 ~~~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l-~~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p 155 (218)
T PRK11587 77 TDTEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL-PAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAP 155 (218)
T ss_pred hhhcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC-CCccEEEEHHHhcCCCCCcHHHHHHHHHcCCCc
Confidence 2234468999999999999999999999999988888888888888 468889999888889999999999999999999
Q ss_pred CcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchhhh
Q 043738 277 ERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDELS 325 (368)
Q Consensus 277 ~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~ 325 (368)
++|++|||+.+|+++|+++|+.+|++.++........++++++++.||.
T Consensus 156 ~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~el~ 204 (218)
T PRK11587 156 QECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHSLEQLT 204 (218)
T ss_pred ccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEecchhhee
Confidence 9999999999999999999999999986654444456999999999984
No 15
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.96 E-value=7.9e-28 Score=219.25 Aligned_cols=187 Identities=29% Similarity=0.462 Sum_probs=151.4
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCH--HHHHHHHHHHHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDP--AELRRMASRMEEIYQ 195 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~--~~~~~l~~~~~~~~~ 195 (368)
+++|||||||||+|+ ..++.++|.++++++|+..+.+..... .|....+.+..+....... ...............
T Consensus 2 ~~avIFD~DGvLvDs-e~~~~~a~~~~~~~~g~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (221)
T COG0637 2 IKAVIFDMDGTLVDS-EPLHARAWLEALKEYGIEISDEEIREL-HGGGIARIIDLLRKLAAGEDPADLAELERLLYEAEA 79 (221)
T ss_pred CcEEEEcCCCCcCcc-hHHHHHHHHHHHHHcCCCCCHHHHHHH-HCCChHHHHHHHHHHhcCCcccCHHHHHHHHHHHHH
Confidence 689999999999987 578889999999999999888775444 5655555444443322111 111111111122222
Q ss_pred HHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 043738 196 ALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFI 275 (368)
Q Consensus 196 ~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~ 275 (368)
.......+.||+.++|+.|+++|+++++.|++++..+...++.+|+..||+.+++++++..+||+|++|..++++||++
T Consensus 80 -~~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~ 158 (221)
T COG0637 80 -LELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVD 158 (221)
T ss_pred -hhhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCC
Confidence 2233369999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCC
Q 043738 276 PERCIVFGNSNQTVEAAHDARMKCVAVASKHP 307 (368)
Q Consensus 276 p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~ 307 (368)
|++||+|+|+.+++++|+++||.+|++...+.
T Consensus 159 P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~~~~ 190 (221)
T COG0637 159 PEECVVVEDSPAGIQAAKAAGMRVVGVPAGHD 190 (221)
T ss_pred hHHeEEEecchhHHHHHHHCCCEEEEecCCCC
Confidence 99999999999999999999999999997554
No 16
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.95 E-value=1.6e-27 Score=216.94 Aligned_cols=209 Identities=18% Similarity=0.268 Sum_probs=161.9
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQA 196 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (368)
++++|+||+||||+|+. .+...+|.++++++|.......+...+.|.+..+.+..++...........+...+.+.+..
T Consensus 3 ~~~~viFD~DGTL~d~~-~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (221)
T PRK10563 3 QIEAVFFDCDGTLVDSE-VICSRAYVTMFAEFGITLSLEEVFKRFKGVKLYEIIDIISKEHGVTLAKAELEPVYRAEVAR 81 (221)
T ss_pred CCCEEEECCCCCCCCCh-HHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Confidence 47899999999999865 56668889999999988776666777788888777776654322111122333334443433
Q ss_pred HHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcccccc-EEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 043738 197 LQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFT-AIVAAEDVHRGKPDPEMFVYAAQLLKFI 275 (368)
Q Consensus 197 ~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd-~iv~~e~v~~~KP~~~~~~~~le~lgi~ 275 (368)
.......++||+.++|+.| +++++|+||+....+...++++|+..+|+ .++++++++..||++++|..+++++|++
T Consensus 82 ~~~~~~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~ 158 (221)
T PRK10563 82 LFDSELEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVN 158 (221)
T ss_pred HHHccCCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCC
Confidence 3334468899999999999 38999999999999999999999999996 6788888899999999999999999999
Q ss_pred CCcEEEEcCCHhhHHHHHHcCCeEEEEcC-CCCccccCCCcEEEcCchhhhHHHH
Q 043738 276 PERCIVFGNSNQTVEAAHDARMKCVAVAS-KHPVYELGAADLVVRHLDELSVVDL 329 (368)
Q Consensus 276 p~~~l~IGDs~nDl~~A~~aG~~~I~v~~-~~~~~~~~~ad~vv~sl~eL~~~~l 329 (368)
|++|++|||+.+|+++|+++|+.+|++.. ++.......++.++.++.||...+.
T Consensus 159 p~~~l~igDs~~di~aA~~aG~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 213 (221)
T PRK10563 159 VENCILVDDSSAGAQSGIAAGMEVFYFCADPHNKPIDHPLVTTFTDLAQLPELWK 213 (221)
T ss_pred HHHeEEEeCcHhhHHHHHHCCCEEEEECCCCCCcchhhhhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999863 3322111235566778877765443
No 17
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.95 E-value=1.4e-26 Score=205.25 Aligned_cols=186 Identities=24% Similarity=0.379 Sum_probs=150.3
Q ss_pred cCCCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Q 043738 114 MGCGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEI 193 (368)
Q Consensus 114 ~~~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ 193 (368)
|+.++++|||||||||+|+. ..+..+|..+++++|...+.. ......|.+..+.+..++...........+...+...
T Consensus 1 ~~~~~~~viFD~DGTLiDs~-~~~~~a~~~~~~~~g~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (188)
T PRK10725 1 MYDRYAGLIFDMDGTILDTE-PTHRKAWREVLGRYGLQFDEQ-AMVALNGSPTWRIAQAIIELNQADLDPHALAREKTEA 78 (188)
T ss_pred CCCcceEEEEcCCCcCccCH-HHHHHHHHHHHHHcCCCCCHH-HHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Confidence 45668999999999999875 466788999999999876544 3567778877776666654321111122333334444
Q ss_pred HHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcC
Q 043738 194 YQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLK 273 (368)
Q Consensus 194 ~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lg 273 (368)
+.........++|+ .++|..|++. ++++|+||+....+...++++|+..||+.+++++++...||+|++|..+++++|
T Consensus 79 ~~~~~~~~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~ 156 (188)
T PRK10725 79 VKSMLLDSVEPLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMG 156 (188)
T ss_pred HHHHHhccCCCccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcC
Confidence 54444444577886 5899999875 899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEcCCHhhHHHHHHcCCeEEEEc
Q 043738 274 FIPERCIVFGNSNQTVEAAHDARMKCVAVA 303 (368)
Q Consensus 274 i~p~~~l~IGDs~nDl~~A~~aG~~~I~v~ 303 (368)
++|++||+|||+.+|+++|+++|+++|++.
T Consensus 157 ~~~~~~l~igDs~~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 157 VQPTQCVVFEDADFGIQAARAAGMDAVDVR 186 (188)
T ss_pred CCHHHeEEEeccHhhHHHHHHCCCEEEeec
Confidence 999999999999999999999999999875
No 18
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.95 E-value=4.4e-26 Score=213.89 Aligned_cols=203 Identities=15% Similarity=0.233 Sum_probs=164.6
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQAL 197 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~ 197 (368)
++++||||||||+|+.+ .+..++.++++++|.+.........+.+.....++..+ ..+......+...+.+.+...
T Consensus 62 ~k~vIFDlDGTLiDS~~-~~~~a~~~~~~~~G~~~~~~~~~~~~~g~~~~~i~~~~---~~~~~~~~~~~~~~~~~~~~~ 137 (273)
T PRK13225 62 LQAIIFDFDGTLVDSLP-TVVAIANAHAPDFGYDPIDERDYAQLRQWSSRTIVRRA---GLSPWQQARLLQRVQRQLGDC 137 (273)
T ss_pred cCEEEECCcCccccCHH-HHHHHHHHHHHHCCCCCCCHHHHHHHhCccHHHHHHHc---CCCHHHHHHHHHHHHHHHHhh
Confidence 78999999999999764 55678899999999875544556777777766665543 234445556666666666554
Q ss_pred HCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 043738 198 QGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPE 277 (368)
Q Consensus 198 ~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~ 277 (368)
. ....++||+.++|+.|+++|++++|+||+....+...++++|+..+|+.++++++. +++++.+..++++++++|+
T Consensus 138 ~-~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~---~~k~~~~~~~l~~~~~~p~ 213 (273)
T PRK13225 138 L-PALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPI---LSKRRALSQLVAREGWQPA 213 (273)
T ss_pred c-ccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCC---CCCHHHHHHHHHHhCcChh
Confidence 3 34688999999999999999999999999999999999999999999999888765 2457899999999999999
Q ss_pred cEEEEcCCHhhHHHHHHcCCeEEEEcCCCCcc-cc--CCCcEEEcCchhhhHHH
Q 043738 278 RCIVFGNSNQTVEAAHDARMKCVAVASKHPVY-EL--GAADLVVRHLDELSVVD 328 (368)
Q Consensus 278 ~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~-~~--~~ad~vv~sl~eL~~~~ 328 (368)
+|++|||+.+|+++|+++||.+|++.++.... ++ ..|+++++++.+|...+
T Consensus 214 ~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~~~~ 267 (273)
T PRK13225 214 AVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLETPSDLLQAV 267 (273)
T ss_pred HEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECCHHHHHHHH
Confidence 99999999999999999999999998654332 22 34999999999997654
No 19
>PLN02940 riboflavin kinase
Probab=99.95 E-value=2e-26 Score=226.03 Aligned_cols=207 Identities=25% Similarity=0.344 Sum_probs=167.2
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQA 196 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (368)
.+++||||+||||+|+. ..+..++..+++++|...+... .....|....+.+..++...........+...+.+.+..
T Consensus 10 ~ik~VIFDlDGTLvDt~-~~~~~a~~~~~~~~G~~~~~~~-~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (382)
T PLN02940 10 LVSHVILDLDGTLLNTD-GIVSDVLKAFLVKYGKQWDGRE-AQKIVGKTPLEAAATVVEDYGLPCSTDEFNSEITPLLSE 87 (382)
T ss_pred cCCEEEECCcCcCCcCH-HHHHHHHHHHHHHcCCCCCHHH-HHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Confidence 47899999999999866 5677889999999998776655 567778887776666554322122223333444444444
Q ss_pred HHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHH-HcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 043738 197 LQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAID-SIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFI 275 (368)
Q Consensus 197 ~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~-~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~ 275 (368)
... ...++||+.++|+.|+++|++++|+||.....+...++ ++|+..+|+.+++++++...||++++|..+++++|+.
T Consensus 88 ~~~-~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~ 166 (382)
T PLN02940 88 QWC-NIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVE 166 (382)
T ss_pred HHc-cCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCC
Confidence 333 36889999999999999999999999999999988887 7899999999999999999999999999999999999
Q ss_pred CCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCC-ccccCCCcEEEcCchhhhH
Q 043738 276 PERCIVFGNSNQTVEAAHDARMKCVAVASKHP-VYELGAADLVVRHLDELSV 326 (368)
Q Consensus 276 p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~-~~~~~~ad~vv~sl~eL~~ 326 (368)
|++|++|||+.+|+++|+++||.+|++.++.. ......+++++.++.++..
T Consensus 167 p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~sl~el~~ 218 (382)
T PLN02940 167 PSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINSLLDLQP 218 (382)
T ss_pred hhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCCHhHcCH
Confidence 99999999999999999999999999986543 2233458999999988753
No 20
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.95 E-value=3e-26 Score=202.35 Aligned_cols=181 Identities=31% Similarity=0.519 Sum_probs=154.5
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhc---CCCHHHHHHHHHHHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCW---SRDPAELRRMASRMEEIY 194 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~---~~~~~~~~~l~~~~~~~~ 194 (368)
+++|+||+||||+|+. ..+..++..+++++|.... ........|......+..++.. ......+..+...+...+
T Consensus 1 ~~~iiFD~DGTL~ds~-~~~~~~~~~~~~~~g~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTA-PLHAQAWKHLADKYGIEFD-KQYNTSLGGLSREDILRAILKLRKPGLSLETIHQLAERKNELY 78 (185)
T ss_pred CCeEEEcCCCcccCCh-HHHHHHHHHHHHHcCCCCC-HHHHHHcCCCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 4789999999999876 5667888899999998765 3445666788777777776643 345666677777777777
Q ss_pred HHHH-CCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcC
Q 043738 195 QALQ-GGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLK 273 (368)
Q Consensus 195 ~~~~-~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lg 273 (368)
.... .....++||+.++|+.|+++|++++++||+ ..++..++++|+..+|+.++++++++..||++++|..+++++|
T Consensus 79 ~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~ 156 (185)
T TIGR02009 79 RELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVKEGKPHPETFLLAAELLG 156 (185)
T ss_pred HHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCCCCCCChHHHHHHHHHcC
Confidence 6665 334689999999999999999999999998 6678899999999999999999999999999999999999999
Q ss_pred CCCCcEEEEcCCHhhHHHHHHcCCeEEEE
Q 043738 274 FIPERCIVFGNSNQTVEAAHDARMKCVAV 302 (368)
Q Consensus 274 i~p~~~l~IGDs~nDl~~A~~aG~~~I~v 302 (368)
++|++|++|||+.+|+++|+++|+.+|+|
T Consensus 157 ~~~~~~v~IgD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 157 VSPNECVVFEDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred CCHHHeEEEeCcHhhHHHHHHCCCeEeeC
Confidence 99999999999999999999999999875
No 21
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.95 E-value=7e-26 Score=214.17 Aligned_cols=216 Identities=24% Similarity=0.341 Sum_probs=159.9
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCC-C--CHHHHHH-HHhCCCHHHHHHHHH--hcC--------CCHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKS-P--PPAFILR-RIEGMKNEQAISEVL--CWS--------RDPAE 182 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~-~--~~~~~~~-~~~g~~~~~~~~~~l--~~~--------~~~~~ 182 (368)
.+++|||||||||+|+...++..+|.++++++|.. . ....+.. ...|.+...+...+. .+. ..+..
T Consensus 39 ~~k~VIFDlDGTLvDS~~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 118 (286)
T PLN02779 39 LPEALLFDCDGVLVETERDGHRVAFNDAFKEFGLRPVEWDVELYDELLNIGGGKERMTWYFNENGWPTSTIEKAPKDEEE 118 (286)
T ss_pred CCcEEEEeCceeEEccccHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHccCCChHHHHHHHHHcCCCccccccCCccchh
Confidence 36899999999999976367778999999999983 2 2222111 114544444333221 111 11222
Q ss_pred ----HHHHHHHHHHHHHHHHCCc-cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcccccc--EEEeCCCC
Q 043738 183 ----LRRMASRMEEIYQALQGGI-YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFT--AIVAAEDV 255 (368)
Q Consensus 183 ----~~~l~~~~~~~~~~~~~~~-~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd--~iv~~e~v 255 (368)
+..+...+...|....... +.++||+.++|+.|++.|++++|+||+....+...++.++...+|+ .+++++++
T Consensus 119 ~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~ 198 (286)
T PLN02779 119 RKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDV 198 (286)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEecccc
Confidence 2233334445555554332 5899999999999999999999999999999988888774444443 23378888
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCC-CccccCCCcEEEcCchhhhHHHHhcc
Q 043738 256 HRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKH-PVYELGAADLVVRHLDELSVVDLKNL 332 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~-~~~~~~~ad~vv~sl~eL~~~~l~~L 332 (368)
...||+|++|..+++++|++|++|++|||+.+|+++|+++||.+|++..+. ...++..+|++++++.++....++-|
T Consensus 199 ~~~KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~~~~l~~~~~~~~ 276 (286)
T PLN02779 199 PKKKPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDCLGDVPLEDFDLL 276 (286)
T ss_pred CCCCCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECChhhcchhhhHHH
Confidence 889999999999999999999999999999999999999999999998543 33445569999999999998887665
No 22
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.95 E-value=6.6e-26 Score=204.03 Aligned_cols=197 Identities=20% Similarity=0.319 Sum_probs=155.1
Q ss_pred EEEeccCccccCcchHHHHHHHHHHHHh-CCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHC
Q 043738 121 AIFEWEGVIIEDNPDLEKQAWLTLAQEE-GKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQALQG 199 (368)
Q Consensus 121 VIFDlDGTLid~~~~i~~~a~~~~~~~~-g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~ 199 (368)
|||||||||+|+. .++.+++.++++++ |.............|......+..+ . ......... ....+ . ..
T Consensus 1 iiFDlDGTL~Ds~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~--~~~~~~~~~---~~~~~-~-~~ 71 (205)
T TIGR01454 1 VVFDLDGVLVDSF-AVMREAFAIAYREVVGDGPAPFEEYRRHLGRYFPDIMRIM-G--LPLEMEEPF---VRESY-R-LA 71 (205)
T ss_pred CeecCcCccccCH-HHHHHHHHHHHHHhcCCCCCCHHHHHHHhCccHHHHHHHc-C--CCHHHHHHH---HHHHH-H-hh
Confidence 6999999999865 56678888888874 7643333345666777766665542 1 111111111 12222 1 22
Q ss_pred CccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 043738 200 GIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERC 279 (368)
Q Consensus 200 ~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~ 279 (368)
....++||+.++|+.|+++|++++++||+....+...++++|+..+|+.++++++....||++++|..+++++|+++++|
T Consensus 72 ~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 151 (205)
T TIGR01454 72 GEVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDA 151 (205)
T ss_pred cccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhhe
Confidence 34689999999999999999999999999999999999999999999999999998899999999999999999999999
Q ss_pred EEEcCCHhhHHHHHHcCCeEEEEcCCCC-cccc--CCCcEEEcCchhhhH
Q 043738 280 IVFGNSNQTVEAAHDARMKCVAVASKHP-VYEL--GAADLVVRHLDELSV 326 (368)
Q Consensus 280 l~IGDs~nDl~~A~~aG~~~I~v~~~~~-~~~~--~~ad~vv~sl~eL~~ 326 (368)
++|||+.+|+++|+++||.+|++.++.. ..++ ..++++++++.+|..
T Consensus 152 l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l~~ 201 (205)
T TIGR01454 152 VMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRKPQSLLA 201 (205)
T ss_pred EEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHHHH
Confidence 9999999999999999999999986543 2232 349999999999864
No 23
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.94 E-value=8e-26 Score=205.48 Aligned_cols=201 Identities=17% Similarity=0.244 Sum_probs=145.1
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHH---HHHhCCCCCHHHHHHHHh------CCC----HHHHHHHHHhcCCCHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTL---AQEEGKSPPPAFILRRIE------GMK----NEQAISEVLCWSRDPAELR 184 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~---~~~~g~~~~~~~~~~~~~------g~~----~~~~~~~~l~~~~~~~~~~ 184 (368)
+++|+||+||||+|+...+ ..++..+ +..+|...+...+...+. +.. .......+.. .......
T Consensus 2 ~~~viFDlDGTL~ds~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~- 78 (221)
T TIGR02253 2 IKAIFFDLDDTLIDTSGLA-EKARRNAIEVLIEAGLNVDFEEAYEELLKLIKEYGSNYPTHFDYLIRRLWE-EYNPKLV- 78 (221)
T ss_pred ceEEEEeCCCCCcCCCCcc-CHHHHHHHHHHHHCCCcCCHHHHHHHHHHHHHHhccccCcchHHHHHHHhh-hcCHHHH-
Confidence 6899999999999976543 3445433 445666665544322211 110 1111111110 0011111
Q ss_pred HHHHHHHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHH
Q 043738 185 RMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEM 264 (368)
Q Consensus 185 ~l~~~~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~ 264 (368)
.......+. .......++||+.++|+.|+++|++++++||+....+...++++|+..+|+.++++++++..||++++
T Consensus 79 --~~~~~~~~~-~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~ 155 (221)
T TIGR02253 79 --AAFVYAYHK-LKFAYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGVEKPHPKI 155 (221)
T ss_pred --HHHHHHHHH-HHHHhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCCCCCCHHH
Confidence 111111112 22223588999999999999999999999999989999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEcCCH-hhHHHHHHcCCeEEEEcCCCCcc----ccCCCcEEEcCchhh
Q 043738 265 FVYAAQLLKFIPERCIVFGNSN-QTVEAAHDARMKCVAVASKHPVY----ELGAADLVVRHLDEL 324 (368)
Q Consensus 265 ~~~~le~lgi~p~~~l~IGDs~-nDl~~A~~aG~~~I~v~~~~~~~----~~~~ad~vv~sl~eL 324 (368)
|..+++++|+++++|++|||+. +|+.+|+++|+.+|++..+.... ....+++++.++.||
T Consensus 156 ~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~el 220 (221)
T TIGR02253 156 FYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQGKSSKMEDDVYPYPDYEISSLREL 220 (221)
T ss_pred HHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEECCCCCcccccccccCCCeeeCcHHhh
Confidence 9999999999999999999998 89999999999999998554321 123488999999876
No 24
>PRK09449 dUMP phosphatase; Provisional
Probab=99.94 E-value=3e-25 Score=202.33 Aligned_cols=205 Identities=16% Similarity=0.203 Sum_probs=147.7
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHH-----HHHH----
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAEL-----RRMA---- 187 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~-----~~l~---- 187 (368)
.+|+|+|||||||+|.. ...++.++++.+|........ ..+.+.. ...+..+.......... ..+.
T Consensus 2 ~~k~iiFDlDGTLid~~---~~~~~~~~~~~~g~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (224)
T PRK09449 2 KYDWILFDADETLFHFD---AFAGLQRMFSRYGVDFTAEDF-QDYQAVN-KPLWVDYQNGAITALQLQHTRFESWAEKLN 76 (224)
T ss_pred CccEEEEcCCCchhcch---hhHHHHHHHHHhCCCCcHHHH-HHHHHHH-HHHHHHHHcCCCCHHHHHHHHHHHHHHHcC
Confidence 37899999999999732 246778888889887554432 2221111 01111111111111111 1111
Q ss_pred ---HHHHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHH
Q 043738 188 ---SRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEM 264 (368)
Q Consensus 188 ---~~~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~ 264 (368)
..+.+.|.........++||+.++|+.|+ .|++++++||+....++..++++|+..+|+.++++++++..||++++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~ 155 (224)
T PRK09449 77 VTPGELNSAFLNAMAEICTPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGVAKPDVAI 155 (224)
T ss_pred CCHHHHHHHHHHHHhhcCccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCCCCCCHHH
Confidence 11223333333333678999999999999 57999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCC-CCcEEEEcCCH-hhHHHHHHcCCeEEEEcC-CCCccccCCCcEEEcCchhhhHH
Q 043738 265 FVYAAQLLKFI-PERCIVFGNSN-QTVEAAHDARMKCVAVAS-KHPVYELGAADLVVRHLDELSVV 327 (368)
Q Consensus 265 ~~~~le~lgi~-p~~~l~IGDs~-nDl~~A~~aG~~~I~v~~-~~~~~~~~~ad~vv~sl~eL~~~ 327 (368)
|..+++++|+. +++|++|||+. +|+.+|+++||.+|++.. +........++++++++.||...
T Consensus 156 ~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~~~el~~~ 221 (224)
T PRK09449 156 FDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSSLSELEQL 221 (224)
T ss_pred HHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECCHHHHHHH
Confidence 99999999985 58999999998 799999999999999984 32222222489999999999754
No 25
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.94 E-value=1.8e-25 Score=197.46 Aligned_cols=180 Identities=29% Similarity=0.494 Sum_probs=148.2
Q ss_pred EEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhc---CCCHHHHHHHHHHHHHHHHH
Q 043738 120 GAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCW---SRDPAELRRMASRMEEIYQA 196 (368)
Q Consensus 120 ~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~---~~~~~~~~~l~~~~~~~~~~ 196 (368)
+||||+||||+|+. .....++.++++.+|.+..... ...+.|.+..+.+..++.. ..+......+...+.+.|..
T Consensus 1 ~iiFD~DGTL~ds~-~~~~~~~~~~~~~~g~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (185)
T TIGR01990 1 AVIFDLDGVITDTA-EYHYLAWKALADELGIPFDEEF-NESLKGVSREDSLERILDLGGKKYSEEEKEELAERKNDYYVE 78 (185)
T ss_pred CeEEcCCCccccCh-HHHHHHHHHHHHHcCCCCCHHH-HHHhcCCChHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 48999999999876 5666889999999998865543 5667787777777666542 23455555666655555554
Q ss_pred HHCC--ccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCC
Q 043738 197 LQGG--IYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKF 274 (368)
Q Consensus 197 ~~~~--~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi 274 (368)
.... ...++||+.++|+.|+++|++++++||+. .....++++|+..+|+.++++++++..||++++|..+++++++
T Consensus 79 ~~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~ 156 (185)
T TIGR01990 79 LLKELTPADVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGV 156 (185)
T ss_pred HHHhcCCcccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCC
Confidence 4321 24789999999999999999999999874 3467899999999999999999999999999999999999999
Q ss_pred CCCcEEEEcCCHhhHHHHHHcCCeEEEEc
Q 043738 275 IPERCIVFGNSNQTVEAAHDARMKCVAVA 303 (368)
Q Consensus 275 ~p~~~l~IGDs~nDl~~A~~aG~~~I~v~ 303 (368)
+|++|++|||+.+|+++|+++||.+|+|.
T Consensus 157 ~~~~~v~vgD~~~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 157 SPSECIGIEDAQAGIEAIKAAGMFAVGVG 185 (185)
T ss_pred CHHHeEEEecCHHHHHHHHHcCCEEEecC
Confidence 99999999999999999999999999874
No 26
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.94 E-value=1.2e-24 Score=197.90 Aligned_cols=205 Identities=19% Similarity=0.274 Sum_probs=150.9
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHH-----HHHHH-----
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAE-----LRRMA----- 187 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~-----~~~l~----- 187 (368)
+++|+||+||||+|+.. ....++.++++++|........ ....+.. ...+..+......... +..+.
T Consensus 1 ~k~viFD~DGTL~d~~~-~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQA-AEALALRLLFEDQGIPLTEDMF-AQYKEIN-QGLWRAYEEGKITKDEVVNTRFSALLKEYNT 77 (224)
T ss_pred CCEEEEcCcCcccccch-HHHHHHHHHHHHhCCCccHHHH-HHHHHHh-HHHHHHHHcCCCCHHHHHHHHHHHHHHHhCC
Confidence 57899999999998764 5556788888888886543321 1111111 1111111111111111 01111
Q ss_pred ----HHHHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHH
Q 043738 188 ----SRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPE 263 (368)
Q Consensus 188 ----~~~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~ 263 (368)
..+...|.........++||+.++|+.|++. ++++++||+....+...++.+|+..+|+.++++++++..||+++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~~~ 156 (224)
T TIGR02254 78 EADEALLNQKYLRFLEEGHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGIQKPDKE 156 (224)
T ss_pred CCcHHHHHHHHHHHHhccCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCCCCCCHH
Confidence 0123333333333458899999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHc-CCCCCcEEEEcCCH-hhHHHHHHcCCeEEEEcCC-CCccccCCCcEEEcCchhhhH
Q 043738 264 MFVYAAQLL-KFIPERCIVFGNSN-QTVEAAHDARMKCVAVASK-HPVYELGAADLVVRHLDELSV 326 (368)
Q Consensus 264 ~~~~~le~l-gi~p~~~l~IGDs~-nDl~~A~~aG~~~I~v~~~-~~~~~~~~ad~vv~sl~eL~~ 326 (368)
+|..+++++ |++|++|++|||+. +|+++|+++||.+|+++.+ ........++++++++.||..
T Consensus 157 ~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~el~~ 222 (224)
T TIGR02254 157 IFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIRSLEELYE 222 (224)
T ss_pred HHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEECCHHHHHh
Confidence 999999999 99999999999998 8999999999999999843 332223358899999999864
No 27
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.93 E-value=1.7e-24 Score=197.74 Aligned_cols=125 Identities=14% Similarity=0.215 Sum_probs=108.1
Q ss_pred CccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 043738 200 GIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERC 279 (368)
Q Consensus 200 ~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~ 279 (368)
....++||+.++|+.|+++|++++++||+....+...++++|+..+|+.++++++++..||+|++|..+++++|++|++|
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~ 169 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERT 169 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHE
Confidence 34688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCHhhHHHHHHcCCe-EEEEcCCCCccccCCCcEEEcCchhhh
Q 043738 280 IVFGNSNQTVEAAHDARMK-CVAVASKHPVYELGAADLVVRHLDELS 325 (368)
Q Consensus 280 l~IGDs~nDl~~A~~aG~~-~I~v~~~~~~~~~~~ad~vv~sl~eL~ 325 (368)
++|||+.+|+++|+++||. +++|..+..... ..+..+.++++++.
T Consensus 170 l~igDs~~di~aA~~aG~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~ 215 (224)
T PRK14988 170 LFIDDSEPILDAAAQFGIRYCLGVTNPDSGIA-EKQYQRHPSLNDYR 215 (224)
T ss_pred EEEcCCHHHHHHHHHcCCeEEEEEeCCCCCcc-chhccCCCcHHHHH
Confidence 9999999999999999998 466775443222 12444456666653
No 28
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.92 E-value=5.8e-24 Score=213.94 Aligned_cols=207 Identities=14% Similarity=0.150 Sum_probs=161.1
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCC-----CCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGK-----SPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRME 191 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~-----~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~ 191 (368)
.+++|||||||||+|+. ..+..+|.+++++++. .......+....|.+..+.+..++... ...........+.
T Consensus 240 m~k~vIFDlDGTLiDs~-~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~l~~~~-~~~~~~~~~~~~~ 317 (459)
T PRK06698 240 MLQALIFDMDGTLFQTD-KILELSLDDTFDHLRSLQLWDTVTPIDKYREIMGVPLPKVWEALLPDH-SLEIREQTDAYFL 317 (459)
T ss_pred hhhheeEccCCceecch-hHHHHHHHHHHHHHhhhcccCCCCCHHHHHHHcCCChHHHHHHHhhhc-chhHHHHHHHHHH
Confidence 36899999999999976 4566889988888741 222234467778888888777765321 2222233334444
Q ss_pred HHHHHHH-CCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHH
Q 043738 192 EIYQALQ-GGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQ 270 (368)
Q Consensus 192 ~~~~~~~-~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le 270 (368)
+.+.... .....++||+.++|+.|+++|++++|+||+....+...++++|+..||+.+++++++. .||+|++|..+++
T Consensus 318 ~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~-~~~kP~~~~~al~ 396 (459)
T PRK06698 318 ERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQIN-SLNKSDLVKSILN 396 (459)
T ss_pred HHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCC-CCCCcHHHHHHHH
Confidence 4444332 2336889999999999999999999999999999999999999999999999998874 4678889999998
Q ss_pred HcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCC-ccccCCCcEEEcCchhhhHHH
Q 043738 271 LLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHP-VYELGAADLVVRHLDELSVVD 328 (368)
Q Consensus 271 ~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~-~~~~~~ad~vv~sl~eL~~~~ 328 (368)
+++ |++|++|||+.+|+.+|+++||.+|++.++.. ..+...+|++++++.++...+
T Consensus 397 ~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~el~~~l 453 (459)
T PRK06698 397 KYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDDLLELKGIL 453 (459)
T ss_pred hcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCCHHHHHHHH
Confidence 875 68999999999999999999999999986543 234456999999999996654
No 29
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.92 E-value=7e-24 Score=230.64 Aligned_cols=213 Identities=21% Similarity=0.321 Sum_probs=169.1
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcC----CCHHH-HHHHHHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWS----RDPAE-LRRMASRMEE 192 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~----~~~~~-~~~l~~~~~~ 192 (368)
+++|||||||||+|+. ..+.++|.++++++|+...... .....|....+++..+.... ..... ...+...+.+
T Consensus 75 ikaVIFDlDGTLiDS~-~~~~~a~~~~~~~~G~~it~e~-~~~~~G~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 152 (1057)
T PLN02919 75 VSAVLFDMDGVLCNSE-EPSRRAAVDVFAEMGVEVTVED-FVPFMGTGEANFLGGVASVKGVKGFDPDAAKKRFFEIYLE 152 (1057)
T ss_pred CCEEEECCCCCeEeCh-HHHHHHHHHHHHHcCCCCCHHH-HHHHhCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence 6899999999999876 5667889999999998876655 45667777776665443221 12221 1222222222
Q ss_pred HHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcc-ccccEEEeCCCCCCCCCCHHHHHHHHHH
Q 043738 193 IYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIE-EYFTAIVAAEDVHRGKPDPEMFVYAAQL 271 (368)
Q Consensus 193 ~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~-~~Fd~iv~~e~v~~~KP~~~~~~~~le~ 271 (368)
.|.. .....++||+.++|+.|+++|++++|+||.....++..++++|+. .+|+.+++++++...||+|++|..++++
T Consensus 153 ~~~~--~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~ 230 (1057)
T PLN02919 153 KYAK--PNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKI 230 (1057)
T ss_pred Hhhh--cccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHH
Confidence 2211 111247999999999999999999999999999999999999996 7899999999999999999999999999
Q ss_pred cCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCcccc--CCCcEEEcCchhhhHHHHhcccc
Q 043738 272 LKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYEL--GAADLVVRHLDELSVVDLKNLAD 334 (368)
Q Consensus 272 lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~--~~ad~vv~sl~eL~~~~l~~L~d 334 (368)
+|+.|++|++|||+.+|+++|+++||.+|++.++....++ ..++++++++.++....+....+
T Consensus 231 lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~~~~ 295 (1057)
T PLN02919 231 LGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDILTGGS 295 (1057)
T ss_pred cCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHHhcCC
Confidence 9999999999999999999999999999999976654444 34899999999998777765533
No 30
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.92 E-value=1e-23 Score=189.39 Aligned_cols=178 Identities=19% Similarity=0.342 Sum_probs=133.2
Q ss_pred eEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHH----H-------------hCCCHHHHH----HHHHhcC
Q 043738 119 LGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRR----I-------------EGMKNEQAI----SEVLCWS 177 (368)
Q Consensus 119 k~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~----~-------------~g~~~~~~~----~~~l~~~ 177 (368)
|+|+||+||||+|+.. ....++.++++++|.......+... + .|....+.+ ...+...
T Consensus 1 k~viFDlDGTL~d~~~-~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 79 (203)
T TIGR02252 1 KLITFDAVGTLLALKE-PVGEVYCEIARKYGVEVSPDELEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDTFGRA 79 (203)
T ss_pred CeEEEecCCceeeeCC-CHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHHHHhc
Confidence 5799999999998764 5567889999999998665432211 0 144433222 2222211
Q ss_pred --CCHHHHHHHHHHHHHHHHHHHC-CccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCC
Q 043738 178 --RDPAELRRMASRMEEIYQALQG-GIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAED 254 (368)
Q Consensus 178 --~~~~~~~~l~~~~~~~~~~~~~-~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~ 254 (368)
.....+... +...+..... ....++||+.++|+.|++.|++++|+||+... +...++++|+..+|+.++++++
T Consensus 80 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~ 155 (203)
T TIGR02252 80 GVPDPESFEKI---FEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYE 155 (203)
T ss_pred CCCCchhHHHH---HHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeecc
Confidence 111222222 2333322221 12478999999999999999999999998765 4778899999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCH-hhHHHHHHcCCeEEE
Q 043738 255 VHRGKPDPEMFVYAAQLLKFIPERCIVFGNSN-QTVEAAHDARMKCVA 301 (368)
Q Consensus 255 v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~-nDl~~A~~aG~~~I~ 301 (368)
++..||++++|..+++++|++|++|++|||+. +|+.+|+++||.+|+
T Consensus 156 ~~~~KP~~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 156 VGAEKPDPKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred cCCCCCCHHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCeeeC
Confidence 99999999999999999999999999999998 899999999999875
No 31
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.92 E-value=6.7e-24 Score=189.88 Aligned_cols=105 Identities=17% Similarity=0.264 Sum_probs=101.1
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
..++||+.++|+.|+++|++++++||++...+...++++|+..+|+.++++++++..||++++|..+++++|++|++|++
T Consensus 91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~~ 170 (198)
T TIGR01428 91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVLF 170 (198)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEEE
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCHhhHHHHHHcCCeEEEEcCCC
Q 043738 282 FGNSNQTVEAAHDARMKCVAVASKH 306 (368)
Q Consensus 282 IGDs~nDl~~A~~aG~~~I~v~~~~ 306 (368)
|||+.+|+.+|+++||.+|+++...
T Consensus 171 vgD~~~Di~~A~~~G~~~i~v~r~~ 195 (198)
T TIGR01428 171 VASNPWDLGGAKKFGFKTAWVNRPG 195 (198)
T ss_pred EeCCHHHHHHHHHCCCcEEEecCCC
Confidence 9999999999999999999998644
No 32
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.91 E-value=1.3e-23 Score=182.29 Aligned_cols=174 Identities=26% Similarity=0.471 Sum_probs=137.4
Q ss_pred EEEeccCccccCcchHHHHHHHH-HHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH-H
Q 043738 121 AIFEWEGVIIEDNPDLEKQAWLT-LAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQAL-Q 198 (368)
Q Consensus 121 VIFDlDGTLid~~~~i~~~a~~~-~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~-~ 198 (368)
|+||+||||+++.. ...+++.. +++.++....... ++...+....+.+..++.... .. .....+.+.+. .
T Consensus 1 iifD~dgtL~d~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~ 72 (176)
T PF13419_consen 1 IIFDLDGTLVDTDP-AIFRALQRLALEEFGLEISAEE-LRELFGKSYEEALERLLERFG--ID----PEEIQELFREYNL 72 (176)
T ss_dssp EEEESBTTTEEHHH-HHHHHHHHHHHHHTTHHHHHHH-HHHHTTSHHHHHHHHHHHHHH--HH----HHHHHHHHHHHHH
T ss_pred cEEECCCCcEeCHH-HHHHHHHHHHHHHhCCCCCHHH-HHHHhCCCHHHHHHHhhhccc--hh----HHHHHHHhhhhhh
Confidence 79999999998654 44456665 5777776643333 444556666666655543211 11 11122222222 2
Q ss_pred CCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 043738 199 GGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPER 278 (368)
Q Consensus 199 ~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~ 278 (368)
.....++||+.++|+.|+++|++++++||++...+...++++|+..+|+.++++++.+..||++++|..+++++|++|++
T Consensus 73 ~~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~ 152 (176)
T PF13419_consen 73 ESKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEE 152 (176)
T ss_dssp HGGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGG
T ss_pred hhccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhhhhhHHHHHHHHHHHcCCCcce
Confidence 24479999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCHhhHHHHHHcCCeEEEE
Q 043738 279 CIVFGNSNQTVEAAHDARMKCVAV 302 (368)
Q Consensus 279 ~l~IGDs~nDl~~A~~aG~~~I~v 302 (368)
|++|||+..|+++|+++||.+|+|
T Consensus 153 ~~~vgD~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 153 ILFVGDSPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp EEEEESSHHHHHHHHHTTSEEEEE
T ss_pred EEEEeCCHHHHHHHHHcCCeEEeC
Confidence 999999999999999999999986
No 33
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.91 E-value=1.6e-23 Score=193.19 Aligned_cols=120 Identities=16% Similarity=0.247 Sum_probs=104.8
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
..++||+.++|+.|++. ++++++||+... ++++|+..+|+.++++++++..||++++|..+++++|++|++|++
T Consensus 112 ~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~ 185 (238)
T PRK10748 112 IDVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEILH 185 (238)
T ss_pred CCCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEEE
Confidence 68899999999999975 999999998654 478999999999999999999999999999999999999999999
Q ss_pred EcCC-HhhHHHHHHcCCeEEEEcCCCCc-----cccCCCcEEEcCchhhhHH
Q 043738 282 FGNS-NQTVEAAHDARMKCVAVASKHPV-----YELGAADLVVRHLDELSVV 327 (368)
Q Consensus 282 IGDs-~nDl~~A~~aG~~~I~v~~~~~~-----~~~~~ad~vv~sl~eL~~~ 327 (368)
|||+ ..|+.+|+++||.+|+++..... .....++++|+++.||..+
T Consensus 186 VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el~~~ 237 (238)
T PRK10748 186 VGDDLTTDVAGAIRCGMQACWINPENGDLMQTWDSRLLPHIEISRLASLTSL 237 (238)
T ss_pred EcCCcHHHHHHHHHCCCeEEEEcCCCccccccccccCCCCEEECCHHHHHhh
Confidence 9999 59999999999999999854321 1112388999999998653
No 34
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=99.91 E-value=5.6e-23 Score=185.09 Aligned_cols=208 Identities=27% Similarity=0.434 Sum_probs=174.3
Q ss_pred cCCCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Q 043738 114 MGCGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEI 193 (368)
Q Consensus 114 ~~~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ 193 (368)
+...+.+++||+||||+|+ ..++.++|..+++++|...+.. ......|+...++.+.++.+..++...++......+.
T Consensus 6 ~~~~~~~~lfD~dG~lvdt-e~~y~~~~~~~~~~ygk~~~~~-~~~~~mG~~~~eaa~~~~~~~~dp~s~ee~~~e~~~~ 83 (222)
T KOG2914|consen 6 LSLKVSACLFDMDGTLVDT-EDLYTEAWQELLDRYGKPYPWD-VKVKSMGKRTSEAARLFVKKLPDPVSREEFNKEEEEI 83 (222)
T ss_pred cccceeeEEEecCCcEEec-HHHHHHHHHHHHHHcCCCChHH-HHHHHcCCCHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Confidence 4556889999999999975 5788899999999999955554 4677899999999998887777777777777777777
Q ss_pred HHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcC-ccccccEEEe--CCCCCCCCCCHHHHHHHHH
Q 043738 194 YQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIG-IEEYFTAIVA--AEDVHRGKPDPEMFVYAAQ 270 (368)
Q Consensus 194 ~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~g-l~~~Fd~iv~--~e~v~~~KP~~~~~~~~le 270 (368)
....... ..+.||+..|++.|+.+|++++++|+.++......+++++ +...|+.++. +.++..+||+|++|..+++
T Consensus 84 ~~~~~~~-~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~ 162 (222)
T KOG2914|consen 84 LDRLFMN-SILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAK 162 (222)
T ss_pred HHHhccc-cccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccCCCCCchHHHHHHH
Confidence 7666655 5889999999999999999999999999999999999887 7788988887 6678999999999999999
Q ss_pred HcCCCC-CcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCcccc-CCCcEEEcCchhh
Q 043738 271 LLKFIP-ERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYEL-GAADLVVRHLDEL 324 (368)
Q Consensus 271 ~lgi~p-~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~-~~ad~vv~sl~eL 324 (368)
.+|..+ +.|++|+|++..+++|+++||.+|+++...-...+ ..+++++.++.+.
T Consensus 163 ~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~~~~~~~~~~~~~~~~~~~~~ 218 (222)
T KOG2914|consen 163 RLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATPDLSNLFSAGATLILESLEDF 218 (222)
T ss_pred hcCCCCccceEEECCCHHHHHHHHhcCCeEEEecCCCcchhhhhccceeccccccc
Confidence 999998 99999999999999999999999999973322221 2366666665543
No 35
>PLN02811 hydrolase
Probab=99.90 E-value=7.9e-23 Score=186.20 Aligned_cols=198 Identities=20% Similarity=0.285 Sum_probs=148.8
Q ss_pred ccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhc-CCCH-HHHHHHHHHHHHHHHHHHCCcc
Q 043738 125 WEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCW-SRDP-AELRRMASRMEEIYQALQGGIY 202 (368)
Q Consensus 125 lDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~-~~~~~l~~~~~~~~~~~~~~~~ 202 (368)
|||||+|+. .++..+|..+++++|+..... ....+.|.....++..+... .... .....+...+...+..... ..
T Consensus 1 ~DGTL~Ds~-~~~~~a~~~~~~~~g~~~~~~-~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 77 (220)
T PLN02811 1 MDGLLLDTE-KFYTEVQEKILARYGKTFDWS-LKAKMMGKKAIEAARIFVEESGLSDSLSPEDFLVEREAMLQDLFP-TS 77 (220)
T ss_pred CCCcceecH-HHHHHHHHHHHHHcCCCCCHH-HHHHccCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHh-hC
Confidence 799999966 567789999999999976544 45677888777666655432 1110 0111222223333333332 35
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHH-HHHHcCccccccEEEeCC--CCCCCCCCHHHHHHHHHHcC---CCC
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLET-AIDSIGIEEYFTAIVAAE--DVHRGKPDPEMFVYAAQLLK---FIP 276 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~-~l~~~gl~~~Fd~iv~~e--~v~~~KP~~~~~~~~le~lg---i~p 276 (368)
.++||+.++|+.|+++|++++|+||........ .++..++..+|+.+++++ ++...||+|++|..++++++ +.|
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~ 157 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVDP 157 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCCCc
Confidence 889999999999999999999999997765543 344457889999999999 88889999999999999997 999
Q ss_pred CcEEEEcCCHhhHHHHHHcCCeEEEEcCCC-CccccCCCcEEEcCchhhh
Q 043738 277 ERCIVFGNSNQTVEAAHDARMKCVAVASKH-PVYELGAADLVVRHLDELS 325 (368)
Q Consensus 277 ~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~-~~~~~~~ad~vv~sl~eL~ 325 (368)
++|++|||+..|+++|+++||.+|++..+. .......+++++.++.++.
T Consensus 158 ~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~~e~~ 207 (220)
T PLN02811 158 GKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLLDFK 207 (220)
T ss_pred cceEEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCHhhCC
Confidence 999999999999999999999999997543 2223345777777777653
No 36
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.90 E-value=9.6e-23 Score=185.91 Aligned_cols=127 Identities=27% Similarity=0.361 Sum_probs=115.2
Q ss_pred ccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 043738 201 IYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCI 280 (368)
Q Consensus 201 ~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l 280 (368)
..+++|++.++|+.++.. ++++++||+....+...+.++|+.++||.++++++++..||++++|..+++++|++|++|+
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l 175 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEAL 175 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEE
Confidence 368899999999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCH-hhHHHHHHcCCeEEEEcCCCCc--cccCCCcEEEcCchhhhHHH
Q 043738 281 VFGNSN-QTVEAAHDARMKCVAVASKHPV--YELGAADLVVRHLDELSVVD 328 (368)
Q Consensus 281 ~IGDs~-nDl~~A~~aG~~~I~v~~~~~~--~~~~~ad~vv~sl~eL~~~~ 328 (368)
+|||+. ||+.+|+++||++||++..+.. .....+++.+.++.++...+
T Consensus 176 ~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~~l~~l~~~~ 226 (229)
T COG1011 176 FVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAELLDLL 226 (229)
T ss_pred EECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEcCHHHHHHHH
Confidence 999999 7889999999999999955432 12245899999999997654
No 37
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.90 E-value=1.4e-22 Score=181.40 Aligned_cols=173 Identities=20% Similarity=0.261 Sum_probs=130.8
Q ss_pred EEEEeccCccccCcchHHHHHHHHHHHHhCC-CCCHHHHHHHHhCCCH--------HHHHHHHHhcCC-----CHHHHHH
Q 043738 120 GAIFEWEGVIIEDNPDLEKQAWLTLAQEEGK-SPPPAFILRRIEGMKN--------EQAISEVLCWSR-----DPAELRR 185 (368)
Q Consensus 120 ~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~-~~~~~~~~~~~~g~~~--------~~~~~~~l~~~~-----~~~~~~~ 185 (368)
+|||||||||+|+. ..+..++..+++++|. ...... ...+.|... ...+..++.... .......
T Consensus 2 ~viFD~DGTLiDs~-~~~~~a~~~~~~~~g~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (197)
T TIGR01548 2 ALVLDMDGVMADVS-QSYRRAIIDTVEHFGGVSVTHAD-IDHTKLAGNANNDWQLTHRLVVDGLNSASSERVRDAPTLEA 79 (197)
T ss_pred ceEEecCceEEech-HHHHHHHHHHHHHHcCCCCCHHH-HHHHHHccCccCchHHHHHHHHHhhhcccchhccCCccHHH
Confidence 69999999999976 4667889999999984 444443 455555321 112222222111 1223344
Q ss_pred HHHHHHHHHHHHHC---------CccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCC
Q 043738 186 MASRMEEIYQALQG---------GIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVH 256 (368)
Q Consensus 186 l~~~~~~~~~~~~~---------~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~ 256 (368)
+...+.+.|..... ....+.++..++|+.|++.|++++|+||++...+...++++|+..+|+.+++++++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~ 159 (197)
T TIGR01548 80 VTAQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCP 159 (197)
T ss_pred HHHHHHHHHcCCcccccccchhhhccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCCC
Confidence 44555555543211 012455667999999999999999999999999999999999999999999999887
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHc
Q 043738 257 RGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDA 295 (368)
Q Consensus 257 ~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~a 295 (368)
. ||++++|..+++++|+++++|++|||+.+|+.+|+++
T Consensus 160 ~-KP~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 160 P-KPNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred C-CcCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 7 9999999999999999999999999999999999875
No 38
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.90 E-value=8.7e-23 Score=184.48 Aligned_cols=184 Identities=17% Similarity=0.223 Sum_probs=127.5
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHH-HHHHHH------
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELR-RMASRM------ 190 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~-~l~~~~------ 190 (368)
+++|||||||||+|+.. ....|...+...|.. .......+.+.........+.........+. .+.+.+
T Consensus 2 ik~viFDldGtL~d~~~--~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 77 (211)
T TIGR02247 2 IKAVIFDFGGVLLPSPG--VMRRWETERGLPGLK--DFIVTVNITGPDFNPWARTFERGELTAEAFDGLFRHEYGLRLGH 77 (211)
T ss_pred ceEEEEecCCceecCHH--HHHHHHHHcCCCCCc--cHHHHHHhcCCCCChHHHHHHcCCCCHHHHHHHHHHHhccccCC
Confidence 57999999999998643 334555544334443 2222344455443332222211111222221 111111
Q ss_pred ----HHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHH--HHHHHHHcCccccccEEEeCCCCCCCCCCHHH
Q 043738 191 ----EEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKT--LETAIDSIGIEEYFTAIVAAEDVHRGKPDPEM 264 (368)
Q Consensus 191 ----~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~--~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~ 264 (368)
...+.........++||+.++|+.|+++|++++++||+.... ....+...++..+|+.++++++++..||++++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~ 157 (211)
T TIGR02247 78 DVRIAPVFPLLYGENTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGLRKPDPRI 157 (211)
T ss_pred CcCchhhHHHHhccccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCCCCCCHHH
Confidence 111222222346789999999999999999999999986543 33344556888999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCC
Q 043738 265 FVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASK 305 (368)
Q Consensus 265 ~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~ 305 (368)
|..+++++|++|++|++|||+..|+.+|+++||.+|++.+.
T Consensus 158 ~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~~~ 198 (211)
T TIGR02247 158 YQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVSDE 198 (211)
T ss_pred HHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEECCH
Confidence 99999999999999999999999999999999999998754
No 39
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.89 E-value=3.9e-22 Score=175.39 Aligned_cols=112 Identities=28% Similarity=0.521 Sum_probs=99.3
Q ss_pred HHHHHHHHHCCc-cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHH
Q 043738 190 MEEIYQALQGGI-YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYA 268 (368)
Q Consensus 190 ~~~~~~~~~~~~-~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~ 268 (368)
+...+....... ..++||+.++|+.|++.|++++++||+.... .....++|+..+|+.++++++++..||++++|..+
T Consensus 71 ~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~ 149 (183)
T TIGR01509 71 KQLFYDAILDEEKLKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLA 149 (183)
T ss_pred HHHHHHHHHhccCCccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHH
Confidence 344444433333 6889999999999999999999999998888 66666799999999999999999999999999999
Q ss_pred HHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEE
Q 043738 269 AQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAV 302 (368)
Q Consensus 269 le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v 302 (368)
++++|++|++|++|||+..|+.+|+++|+.+|+|
T Consensus 150 ~~~~~~~~~~~~~vgD~~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 150 LKKLGLKPEECLFVDDSPAGIEAAKAAGMHTVLV 183 (183)
T ss_pred HHHcCCCcceEEEEcCCHHHHHHHHHcCCEEEeC
Confidence 9999999999999999999999999999999875
No 40
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.88 E-value=5.6e-22 Score=177.37 Aligned_cols=188 Identities=10% Similarity=0.106 Sum_probs=134.1
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQAL 197 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~ 197 (368)
+|+|||||||||+|.. .++..+++++|++. ..+ ....|..........+. .+......+...+.. ..
T Consensus 2 ~k~viFDlDGTLiD~~-----~~~~~~~~~~g~~~--~~~-~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~---~~ 68 (197)
T PHA02597 2 KPTILTDVDGVLLSWQ-----SGLPYFAQKYNIPT--DHI-LKMIQDERFRDPGELFG--CDQELAKKLIEKYNN---SD 68 (197)
T ss_pred CcEEEEecCCceEchh-----hccHHHHHhcCCCH--HHH-HHHHhHhhhcCHHHHhc--ccHHHHHHHhhhhhH---HH
Confidence 5899999999999843 46677888888753 333 33333322222233332 223333333333321 22
Q ss_pred HCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccc----cccEEEeCCCCCCCCCCHHHHHHHHHHcC
Q 043738 198 QGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEE----YFTAIVAAEDVHRGKPDPEMFVYAAQLLK 273 (368)
Q Consensus 198 ~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~----~Fd~iv~~e~v~~~KP~~~~~~~~le~lg 273 (368)
......++||+.++|+.|++. ++++++||.........++.+++.. +|+.++++++. ||++++|..+++++|
T Consensus 69 ~~~~~~~~pG~~e~L~~L~~~-~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~---~~kp~~~~~a~~~~~ 144 (197)
T PHA02597 69 FIRYLSAYDDALDVINKLKED-YDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHD---ESKEKLFIKAKEKYG 144 (197)
T ss_pred HHHhccCCCCHHHHHHHHHhc-CCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccC---cccHHHHHHHHHHhC
Confidence 223357899999999999987 5788889987776666777887765 45677777663 677899999999999
Q ss_pred CCCCcEEEEcCCHhhHHHHHHc--CCeEEEEcCCCCccccCCCcEEEcCchhhh
Q 043738 274 FIPERCIVFGNSNQTVEAAHDA--RMKCVAVASKHPVYELGAADLVVRHLDELS 325 (368)
Q Consensus 274 i~p~~~l~IGDs~nDl~~A~~a--G~~~I~v~~~~~~~~~~~ad~vv~sl~eL~ 325 (368)
|++|+||||+.+|+.+|+++ ||++|++++++. .....+++.|.++.|+.
T Consensus 145 --~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~~-~~~~~~~~~~~~~~~~~ 195 (197)
T PHA02597 145 --DRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGER-DHIPKLAHRVKSWNDIE 195 (197)
T ss_pred --CCcEEEeCCCHHHHHHHHHHHcCCcEEEecchhh-ccccchhhhhccHHHHh
Confidence 89999999999999999999 999999987764 33335779999998874
No 41
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.88 E-value=6.5e-22 Score=175.02 Aligned_cols=169 Identities=19% Similarity=0.186 Sum_probs=122.2
Q ss_pred EEEEeccCccccCcchHHHHHHHHHH-----HHhCCCCCHHHHHH----HHhCCCHHHHHHHHHhcCCCHHHHHHHHHHH
Q 043738 120 GAIFEWEGVIIEDNPDLEKQAWLTLA-----QEEGKSPPPAFILR----RIEGMKNEQAISEVLCWSRDPAELRRMASRM 190 (368)
Q Consensus 120 ~VIFDlDGTLid~~~~i~~~a~~~~~-----~~~g~~~~~~~~~~----~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~ 190 (368)
+|+|||||||+|+...+. .++.+.+ +++|++......+. ...|......... ...... . +
T Consensus 2 ~viFDlDGTL~ds~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~g~~~~~~~~~---~~~~~~---~----~ 70 (184)
T TIGR01993 2 VWFFDLDNTLYPHSAGIF-LQIDRNITEFVAARLKLSEEEARVLRKDYYREYGTTLAGLMIL---HEIDAD---E----Y 70 (184)
T ss_pred eEEEeCCCCCCCCcccHH-HHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHchHHHHHHHh---hCCCHH---H----H
Confidence 699999999999765554 4454443 34565433221111 1123222222211 112221 1 2
Q ss_pred HHHHHHHH-CCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCC----CCCCHHHH
Q 043738 191 EEIYQALQ-GGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHR----GKPDPEMF 265 (368)
Q Consensus 191 ~~~~~~~~-~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~----~KP~~~~~ 265 (368)
...+.... .....+++|+.++|+.|+ .+++++||+....+...++++|+..+|+.++++++.+. .||++++|
T Consensus 71 ~~~~~~~~~~~~~~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~ 147 (184)
T TIGR01993 71 LRYVHGRLPYEKLKPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAY 147 (184)
T ss_pred HHHHhccCCHHhCCCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCccCCCCCCHHHH
Confidence 22222111 112578999999999998 47999999999999999999999999999999998877 59999999
Q ss_pred HHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEE
Q 043738 266 VYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAV 302 (368)
Q Consensus 266 ~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v 302 (368)
..+++++|++|++|++|||+..|+++|+++||++|+|
T Consensus 148 ~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 148 EKALREAGVDPERAIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred HHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence 9999999999999999999999999999999999875
No 42
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.88 E-value=3.4e-21 Score=172.69 Aligned_cols=105 Identities=16% Similarity=0.209 Sum_probs=96.7
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHH-cCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDS-IGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~-~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
.++||+.++|+.|++.|++++++||++.......+.. .++..+|+.++++++++..||+|++|..+++++|++|++|++
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~ 163 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADAVF 163 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHeEE
Confidence 5799999999999999999999999988777666655 478899999999999999999999999999999999999999
Q ss_pred EcCCHhhHHHHHHcCCeEEEEcCCCC
Q 043738 282 FGNSNQTVEAAHDARMKCVAVASKHP 307 (368)
Q Consensus 282 IGDs~nDl~~A~~aG~~~I~v~~~~~ 307 (368)
|||+..|+.+|+++||.+|++.++..
T Consensus 164 vgD~~~di~aA~~aG~~~i~~~~~~~ 189 (199)
T PRK09456 164 FDDNADNIEAANALGITSILVTDKQT 189 (199)
T ss_pred eCCCHHHHHHHHHcCCEEEEecCCcc
Confidence 99999999999999999999886543
No 43
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.86 E-value=2.7e-20 Score=159.74 Aligned_cols=154 Identities=19% Similarity=0.387 Sum_probs=119.8
Q ss_pred EEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHC
Q 043738 120 GAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQALQG 199 (368)
Q Consensus 120 ~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~ 199 (368)
+|+||+||||+|+. .....+|..++++++. +... +....|...... ..+ ...+++.. . ..
T Consensus 1 ~iifD~DGTL~d~~-~~~~~~~~~~~~~~~~--~~~~-~~~~~g~~~~~~-~~~-------------~~~~~~~~-~-~~ 60 (154)
T TIGR01549 1 AILFDIDGTLVDSS-FAIRRAFEETLEEFGE--DFQA-LKALRGLAEELL-YRI-------------ATSFEELL-G-YD 60 (154)
T ss_pred CeEecCCCcccccH-HHHHHHHHHHHHHhcc--cHHH-HHHHHccChHHH-HHH-------------HHHHHHHh-C-cc
Confidence 48999999999865 4666888999888875 2222 233344332221 111 11112111 1 11
Q ss_pred CccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 043738 200 GIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERC 279 (368)
Q Consensus 200 ~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~ 279 (368)
.....++|+.++|+.|+++|++++++||+....+...++++ +..+|+.++++++.. .||++++|..+++++|+++ +|
T Consensus 61 ~~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~~~~~-~~ 137 (154)
T TIGR01549 61 AEEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEFG-AKPEPEIFLAALESLGLPP-EV 137 (154)
T ss_pred hhheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCCC-CCcCHHHHHHHHHHcCCCC-CE
Confidence 23466799999999999999999999999999999999988 888999999999888 9999999999999999999 99
Q ss_pred EEEcCCHhhHHHHHHcC
Q 043738 280 IVFGNSNQTVEAAHDAR 296 (368)
Q Consensus 280 l~IGDs~nDl~~A~~aG 296 (368)
++|||+.+|+++|+++|
T Consensus 138 l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 138 LHVGDNLNDIEGARNAG 154 (154)
T ss_pred EEEeCCHHHHHHHHHcc
Confidence 99999999999999987
No 44
>PLN02954 phosphoserine phosphatase
Probab=99.85 E-value=6.4e-20 Score=167.16 Aligned_cols=193 Identities=20% Similarity=0.187 Sum_probs=134.8
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhC--CCHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEG--MKNEQAISEVLCWSRDPAELRRMASRMEEIY 194 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g--~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~ 194 (368)
.+|+|||||||||+++ ..+..+++.+|...........+.+ +...+.+...+..... .. ..+.+.+
T Consensus 11 ~~k~viFDfDGTL~~~------~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~----~~~~~~~ 78 (224)
T PLN02954 11 SADAVCFDVDSTVCVD------EGIDELAEFCGAGEAVAEWTAKAMGGSVPFEEALAARLSLFKP--SL----SQVEEFL 78 (224)
T ss_pred cCCEEEEeCCCcccch------HHHHHHHHHcCChHHHHHHHHHHHCCCCCHHHHHHHHHHHcCC--CH----HHHHHHH
Confidence 3789999999999985 3567888888876555555555444 4444444443322111 01 1122222
Q ss_pred HHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcc--ccccEE--------EeCCC----CCCCCC
Q 043738 195 QALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIE--EYFTAI--------VAAED----VHRGKP 260 (368)
Q Consensus 195 ~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~--~~Fd~i--------v~~e~----v~~~KP 260 (368)
.. ....++||+.++|+.|+++|++++|+|++....++.+++.+|+. .+|... +.+.+ ....++
T Consensus 79 ~~---~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~ 155 (224)
T PLN02954 79 EK---RPPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGG 155 (224)
T ss_pred HH---ccCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCcc
Confidence 22 12468999999999999999999999999999999999999986 356431 11111 123567
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCc-c-ccCCCcEEEcCchhhhH
Q 043738 261 DPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPV-Y-ELGAADLVVRHLDELSV 326 (368)
Q Consensus 261 ~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~-~-~~~~ad~vv~sl~eL~~ 326 (368)
|++++..+++++|. ++|++|||+.+|+.+|+++|+.++...++... . ....+++++.++.+|..
T Consensus 156 K~~~i~~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~ 221 (224)
T PLN02954 156 KAEAVQHIKKKHGY--KTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDLIE 221 (224)
T ss_pred HHHHHHHHHHHcCC--CceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHHHH
Confidence 88999999999885 68999999999999999999887665443322 1 12348999999999854
No 45
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.85 E-value=1.8e-20 Score=170.18 Aligned_cols=190 Identities=15% Similarity=0.188 Sum_probs=128.9
Q ss_pred CCCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHH-hC-CCHHHHHHHHHh-cCCCHHHHHHHHHHHH
Q 043738 115 GCGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRI-EG-MKNEQAISEVLC-WSRDPAELRRMASRME 191 (368)
Q Consensus 115 ~~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~-~g-~~~~~~~~~~l~-~~~~~~~~~~l~~~~~ 191 (368)
.+++++++|||||||+++. .+.++++.+|............ .| ..........+. +... ..
T Consensus 11 ~~~~k~iiFD~DGTL~~~~------~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----------~~ 74 (219)
T TIGR00338 11 LRSKKLVVFDMDSTLINAE------TIDEIAKIAGVEEEVSEITERAMRGELDFKASLRERVALLKGL----------PV 74 (219)
T ss_pred hccCCEEEEeCcccCCCch------HHHHHHHHhCCHHHHHHHHHHHHcCCCCHHHHHHHHHHHhCCC----------CH
Confidence 4457899999999999853 4667777777653333222222 12 122222222111 0000 01
Q ss_pred HHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEE-------eCC---CCCCCCCC
Q 043738 192 EIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIV-------AAE---DVHRGKPD 261 (368)
Q Consensus 192 ~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv-------~~e---~v~~~KP~ 261 (368)
+.+..... ...++||+.++|+.|+++|++++++||+....+...++++|+..+|+..+ ++. ....++|+
T Consensus 75 ~~~~~~~~-~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 153 (219)
T TIGR00338 75 ELLKEVRE-NLPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYK 153 (219)
T ss_pred HHHHHHHh-cCCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEEEEecCcccCCccc
Confidence 12222222 25789999999999999999999999999999999999999988885322 221 12235678
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCc--hhh
Q 043738 262 PEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHL--DEL 324 (368)
Q Consensus 262 ~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl--~eL 324 (368)
+.+|..+++++++++++|++|||+.+|+++|+.+|+.+++ ++. . .....|++++.+. .++
T Consensus 154 ~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~-~~~-~-~~~~~a~~~i~~~~~~~~ 215 (219)
T TIGR00338 154 GKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAF-NAK-P-KLQQKADICINKKDLTDI 215 (219)
T ss_pred HHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEe-CCC-H-HHHHhchhccCCCCHHHH
Confidence 9999999999999999999999999999999999998644 322 1 1223588988744 444
No 46
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.84 E-value=2.4e-20 Score=178.53 Aligned_cols=200 Identities=13% Similarity=0.090 Sum_probs=138.2
Q ss_pred CCCCCCChhhhhcccCCCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhC--CCHHHHHHHHHh-c
Q 043738 100 DNPSLHNPLLRQERMGCGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEG--MKNEQAISEVLC-W 176 (368)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g--~~~~~~~~~~l~-~ 176 (368)
...++...++......+.+++|+|||||||+. .+++.++++.+|.......+...... ....+.+...+. .
T Consensus 92 ~~~~~d~~~~~~~~~~~~~~LvvfDmDGTLI~------~e~i~eia~~~g~~~~v~~it~~~m~Geldf~esl~~rv~~l 165 (322)
T PRK11133 92 HELGLDVAPLGKIPHLRTPGLLVMDMDSTAIQ------IECIDEIAKLAGTGEEVAEVTERAMRGELDFEASLRQRVATL 165 (322)
T ss_pred hhcCCcEEEecCcccccCCCEEEEECCCCCcc------hHHHHHHHHHhCCchHHHHHHHHHHcCCcCHHHHHHHHHHHh
Confidence 34445554554444456689999999999994 25788888888876655444333322 222222221111 1
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcccccc-------EE
Q 043738 177 SRDPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFT-------AI 249 (368)
Q Consensus 177 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd-------~i 249 (368)
.... .+.+.... ...+++||+.++|+.|++.|++++|+|+++...++.+++++|+...+. ..
T Consensus 166 ~g~~----------~~il~~v~-~~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ 234 (322)
T PRK11133 166 KGAD----------ANILQQVR-ENLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGK 234 (322)
T ss_pred CCCC----------HHHHHHHH-HhCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCE
Confidence 1111 11122221 236899999999999999999999999999999999999999875443 22
Q ss_pred EeCC---CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEc
Q 043738 250 VAAE---DVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVR 319 (368)
Q Consensus 250 v~~e---~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~ 319 (368)
+++. ++..+|||++.++.+++++|+++++|++|||+.||++|++.+|+.+++ +... .....||++++
T Consensus 235 ltg~v~g~iv~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp--~Vk~~Ad~~i~ 304 (322)
T PRK11133 235 LTGNVLGDIVDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKP--KVNEQAQVTIR 304 (322)
T ss_pred EEeEecCccCCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCH--HHHhhCCEEec
Confidence 2222 233578999999999999999999999999999999999999998877 3221 22235999996
No 47
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.83 E-value=1.8e-19 Score=161.07 Aligned_cols=177 Identities=13% Similarity=0.060 Sum_probs=118.5
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHH-HHhCCCH-HHHHHHHHhcCCCHHHHHHHH-HHHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILR-RIEGMKN-EQAISEVLCWSRDPAELRRMA-SRMEEIY 194 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~-~~~g~~~-~~~~~~~l~~~~~~~~~~~l~-~~~~~~~ 194 (368)
+|+|+|||||||+++.. .|..+...+|.......... ...|... .+...... ..+.... ....+.+
T Consensus 4 ~k~viFD~DGTLid~~~-----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 72 (201)
T TIGR01491 4 IKLIIFDLDGTLTDVMS-----SWEYLHRRLETCGLAKKNAELFFSGRISYEEWARLDA------SLWKRRSGRLRREEV 72 (201)
T ss_pred ceEEEEeCCCCCcCCcc-----HHHHHHHHhCchHHHHHHHHHHHcCCCCHHHHHHHHH------HHHhhcccCCCHHHH
Confidence 78999999999998652 34555555665422222111 2223222 22111110 0000000 0011222
Q ss_pred HHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCC----------CCHHH
Q 043738 195 QALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGK----------PDPEM 264 (368)
Q Consensus 195 ~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~K----------P~~~~ 264 (368)
..... ...++||+.++|+.|+++|++++|+|++....++..++++|+..+|+..+..++.+..+ ++.+.
T Consensus 73 ~~~~~-~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~ 151 (201)
T TIGR01491 73 EEIFK-EISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEA 151 (201)
T ss_pred HHHHH-hCCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHH
Confidence 22222 25899999999999999999999999999999999999999988887666554433323 34468
Q ss_pred HHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCC
Q 043738 265 FVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKH 306 (368)
Q Consensus 265 ~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~ 306 (368)
+..+++++|+++++|++|||+.+|+++|+.+|+.++..++++
T Consensus 152 ~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~ 193 (201)
T TIGR01491 152 VERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGH 193 (201)
T ss_pred HHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCcc
Confidence 899999999999999999999999999999999876644443
No 48
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.82 E-value=2e-19 Score=162.69 Aligned_cols=189 Identities=16% Similarity=0.262 Sum_probs=134.7
Q ss_pred CCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHH-----------------hC-CCHHHHHHHHHhcC
Q 043738 116 CGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRI-----------------EG-MKNEQAISEVLCWS 177 (368)
Q Consensus 116 ~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~-----------------~g-~~~~~~~~~~l~~~ 177 (368)
+++++|+||++|||+..... ....|..+.+.+|+..+........ .| ++..+.+..+....
T Consensus 5 ~~iravtfD~~~tLl~~~~~-~~~~y~~i~~~~gl~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~~ww~~lv~~~ 83 (237)
T KOG3085|consen 5 MRIRAVTFDAGGTLLATLPP-VMEVYCEIAEAYGLEYDDSLIETIFRKDFKKMSEKGPFFGLYSGELTLSQWWPKLVEST 83 (237)
T ss_pred cceEEEEEeCCCceeecCCc-cHHHHHHHHHHhCCCCCHHHHhHhhhHHHHhhcccCCcccccCCcccHHHHHHHHHHHH
Confidence 45899999999999964433 3467889999999985443321110 01 23333333222111
Q ss_pred C---CHHHHHHHHHH-HHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCC
Q 043738 178 R---DPAELRRMASR-MEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAE 253 (368)
Q Consensus 178 ~---~~~~~~~l~~~-~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e 253 (368)
. ........... ....|.........+.+++.++++.|+..|+.++++||.+...- ..+..+|+..|||.++.+.
T Consensus 84 f~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~~-~~l~~~~l~~~fD~vv~S~ 162 (237)
T KOG3085|consen 84 FGKAGIDYEEELLENFSFRLFSTFAPSAWKYLDGMQELLQKLRKKGTILGIISNFDDRLR-LLLLPLGLSAYFDFVVESC 162 (237)
T ss_pred hccccchhHHHHHhhhhhheeccccccCceeccHHHHHHHHHHhCCeEEEEecCCcHHHH-HHhhccCHHHhhhhhhhhh
Confidence 1 11111111111 11222222112346778888999999999999999999875554 8888999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCH-hhHHHHHHcCCeEEEEcCCC
Q 043738 254 DVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSN-QTVEAAHDARMKCVAVASKH 306 (368)
Q Consensus 254 ~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~-nDl~~A~~aG~~~I~v~~~~ 306 (368)
+++..||+|.+|..+++++++.|++|++|||.. ||+++|+++||+++.|.+..
T Consensus 163 e~g~~KPDp~If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~ 216 (237)
T KOG3085|consen 163 EVGLEKPDPRIFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNSI 216 (237)
T ss_pred hhccCCCChHHHHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEcccc
Confidence 999999999999999999999999999999999 99999999999999988443
No 49
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.82 E-value=3.2e-19 Score=157.65 Aligned_cols=126 Identities=21% Similarity=0.235 Sum_probs=102.8
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCCh---------------HHHHHHHHHcCccccccEEEeC-----CCCCCCCCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPR---------------KTLETAIDSIGIEEYFTAIVAA-----EDVHRGKPD 261 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~---------------~~~~~~l~~~gl~~~Fd~iv~~-----e~v~~~KP~ 261 (368)
..++||+.++|+.|++.|++++|+||... ..+...++++|+ +|+.++.+ +++...||+
T Consensus 28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~~~~~~~~~~KP~ 105 (181)
T PRK08942 28 WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPHHPEDGCDCRKPK 105 (181)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCCCCCcCCCCC
Confidence 36789999999999999999999999863 234455667776 48877754 346789999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCcccc--CCC--cEEEcCchhhhHHHH
Q 043738 262 PEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYEL--GAA--DLVVRHLDELSVVDL 329 (368)
Q Consensus 262 ~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~--~~a--d~vv~sl~eL~~~~l 329 (368)
+++|..+++++|+.+++|++|||+.+|+.+|+++|+.+|++..+...... ..+ +++++++.++...+.
T Consensus 106 p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~l~ 177 (181)
T PRK08942 106 PGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQALK 177 (181)
T ss_pred HHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999855432222 235 999999999976553
No 50
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=99.82 E-value=1.3e-18 Score=157.85 Aligned_cols=185 Identities=12% Similarity=0.115 Sum_probs=128.6
Q ss_pred ceEEEEeccCccccCc------chHHHHHHHHHHHHhCCCCCHHHHHHHHhCC-CHHHHHH---HHHhcCCCHHHHHHHH
Q 043738 118 WLGAIFEWEGVIIEDN------PDLEKQAWLTLAQEEGKSPPPAFILRRIEGM-KNEQAIS---EVLCWSRDPAELRRMA 187 (368)
Q Consensus 118 ik~VIFDlDGTLid~~------~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~-~~~~~~~---~~l~~~~~~~~~~~l~ 187 (368)
+++|++|+.||+..-. -.+..+....+++.......... ++...+. ....... ..+........++.+.
T Consensus 1 ~~~~l~diegt~~~isfv~~~lfpy~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~k~~~lk~lq 79 (220)
T TIGR01691 1 IKNVLLDIEGTTGSISFVHDVLFPYAASRLESFVNDNYESTIVEN-LRELGKTPEELILLRKLHAEMDKDRKATPLKTLQ 79 (220)
T ss_pred CCEEEEecCCCcccHHHHHhhhhHHHHHHHHHHHHHhCCCHHHHH-HHHhccCCcHHHHHHHHHHHHHcCCCcchHHHHH
Confidence 4789999999998522 12223333344444332222222 2222222 1122222 2233333444455555
Q ss_pred HH-HHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHc---CccccccEEEeCCCCCCCCCCHH
Q 043738 188 SR-MEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSI---GIEEYFTAIVAAEDVHRGKPDPE 263 (368)
Q Consensus 188 ~~-~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~---gl~~~Fd~iv~~e~v~~~KP~~~ 263 (368)
.. +.+.|... .....++||+.++|+.|+++|++++|+||++...++..+++. ++..+|+.++.. .. ..||+++
T Consensus 80 g~iw~~~Y~~~-~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~-~~-g~KP~p~ 156 (220)
T TIGR01691 80 GLIWRQGYESG-ELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDT-TV-GLKTEAQ 156 (220)
T ss_pred HHHHHHHHhcC-CcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEe-Cc-ccCCCHH
Confidence 44 66666553 223579999999999999999999999999998888888876 677778877653 23 3699999
Q ss_pred HHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCC
Q 043738 264 MFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKH 306 (368)
Q Consensus 264 ~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~ 306 (368)
.|..+++++|++|++|+||||+..|+++|+++||.+|++.++.
T Consensus 157 ~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g 199 (220)
T TIGR01691 157 SYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQLVRPG 199 (220)
T ss_pred HHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEEEECCC
Confidence 9999999999999999999999999999999999999988544
No 51
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.81 E-value=9.6e-19 Score=153.92 Aligned_cols=122 Identities=19% Similarity=0.305 Sum_probs=100.6
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCCh---------------HHHHHHHHHcCccccccEEEeC-----------CCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPR---------------KTLETAIDSIGIEEYFTAIVAA-----------EDV 255 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~---------------~~~~~~l~~~gl~~~Fd~iv~~-----------e~v 255 (368)
..++||+.++|+.|+++|++++++||.+. ..+...+.++++. |+.++.+ ++.
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~~~~~~~~~~~~~~ 102 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCPHHPEGVEEFRQVC 102 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECCCCCcccccccCCC
Confidence 47889999999999999999999999874 3344566666666 7776653 244
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeE-EEEcCCCCcccc--CCCcEEEcCchhhh
Q 043738 256 HRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKC-VAVASKHPVYEL--GAADLVVRHLDELS 325 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~-I~v~~~~~~~~~--~~ad~vv~sl~eL~ 325 (368)
...||++++|..+++++|+++++|+||||+.+|+++|+++|+.+ +++.++...... ..||++++++.||.
T Consensus 103 ~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el~ 175 (176)
T TIGR00213 103 DCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADLP 175 (176)
T ss_pred CCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHhh
Confidence 57899999999999999999999999999999999999999998 788865543222 24999999999985
No 52
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.80 E-value=3.7e-19 Score=155.87 Aligned_cols=87 Identities=16% Similarity=0.267 Sum_probs=82.4
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
..++||+.++|+ +++|+||++...+...++++|+..+|+.++++++++..||++++|..+++++|++|++|++
T Consensus 89 ~~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~ 161 (175)
T TIGR01493 89 LPPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLM 161 (175)
T ss_pred CCCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEe
Confidence 578999999998 3899999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCHhhHHHHHHc
Q 043738 282 FGNSNQTVEAAHDA 295 (368)
Q Consensus 282 IGDs~nDl~~A~~a 295 (368)
|||+..|+.+|+++
T Consensus 162 vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 162 VAAHQWDLIGARKF 175 (175)
T ss_pred EecChhhHHHHhcC
Confidence 99999999999864
No 53
>PRK06769 hypothetical protein; Validated
Probab=99.79 E-value=1.1e-18 Score=153.19 Aligned_cols=127 Identities=13% Similarity=0.184 Sum_probs=102.9
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChH--------HHHHHHHHcCccccccEEE-eCCCCCCCCCCHHHHHHHHHHc
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRK--------TLETAIDSIGIEEYFTAIV-AAEDVHRGKPDPEMFVYAAQLL 272 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~--------~~~~~l~~~gl~~~Fd~iv-~~e~v~~~KP~~~~~~~~le~l 272 (368)
..++||+.++|+.|++.|++++++||.... .....++.+|+..+|..+. +++++...||++++|..+++++
T Consensus 27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~l 106 (173)
T PRK06769 27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCECRKPSTGMLLQAAEKH 106 (173)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCCCCCCCHHHHHHHHHHc
Confidence 467899999999999999999999998631 2334466777766554433 4566778999999999999999
Q ss_pred CCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCc-------ccc--CCCcEEEcCchhhhHHH
Q 043738 273 KFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPV-------YEL--GAADLVVRHLDELSVVD 328 (368)
Q Consensus 273 gi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~-------~~~--~~ad~vv~sl~eL~~~~ 328 (368)
+++|++|++|||+.+|+.+|+++|+.+|++.++... ..+ ..++++++++.|+...+
T Consensus 107 ~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el~~~l 171 (173)
T PRK06769 107 GLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDAVNWI 171 (173)
T ss_pred CCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchhhCHHHHHHHH
Confidence 999999999999999999999999999999865422 112 24899999999996643
No 54
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.78 E-value=8.1e-19 Score=149.90 Aligned_cols=103 Identities=18% Similarity=0.273 Sum_probs=86.5
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCCh---------------HHHHHHHHHcCcccc--ccEEE-eCCCCCCCCCCHHH
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPR---------------KTLETAIDSIGIEEY--FTAIV-AAEDVHRGKPDPEM 264 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~---------------~~~~~~l~~~gl~~~--Fd~iv-~~e~v~~~KP~~~~ 264 (368)
.++||+.++|+.|+++|++++++||... ..+...++++|+... |..++ +++..+..||++++
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~KP~~~~ 106 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNCSCRKPKPGL 106 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCCCCCCCCHHH
Confidence 6789999999999999999999999863 456677888888621 21111 13455667999999
Q ss_pred HHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCC
Q 043738 265 FVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASK 305 (368)
Q Consensus 265 ~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~ 305 (368)
|..+++++++++++|++|||+..|+++|+++|+++|+++.+
T Consensus 107 ~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 107 ILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVDG 147 (147)
T ss_pred HHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence 99999999999999999999999999999999999998753
No 55
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.76 E-value=7e-18 Score=153.57 Aligned_cols=195 Identities=17% Similarity=0.180 Sum_probs=126.9
Q ss_pred eEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHh-C-CCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 043738 119 LGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIE-G-MKNEQAISEVLCWSRDPAELRRMASRMEEIYQA 196 (368)
Q Consensus 119 k~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~-g-~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (368)
++|+|||||||+++... + .+++.++. .....+...+. | +...+.+...+.+.... ..+.+.+
T Consensus 4 ~~vifDfDgTi~~~d~~-----~-~~~~~~~~-~~~~~i~~~~~~g~~~~~~~~~~~~~~l~~~---------~~~~~~~ 67 (219)
T PRK09552 4 IQIFCDFDGTITNNDNI-----I-AIMKKFAP-PEWEELKDDILSQELSIQEGVGQMFQLLPSN---------LKEEIIQ 67 (219)
T ss_pred cEEEEcCCCCCCcchhh-----H-HHHHHhCH-HHHHHHHHHHHhCCcCHHHHHHHHHHhCCCC---------chHHHHH
Confidence 48999999999986531 1 24444442 12222222221 1 23344444443321111 0111222
Q ss_pred HHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccc--cc--cEEEeCCCCCCCCCCHHH--------
Q 043738 197 LQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEE--YF--TAIVAAEDVHRGKPDPEM-------- 264 (368)
Q Consensus 197 ~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~--~F--d~iv~~e~v~~~KP~~~~-------- 264 (368)
.+.....++||+.++|+.|+++|++++|+|++....+..+++++ +.. ++ +..+.++.....||++..
T Consensus 68 ~~~~~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~ 146 (219)
T PRK09552 68 FLLETAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCG 146 (219)
T ss_pred HHHhCCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCC
Confidence 22233689999999999999999999999999999999999987 643 23 344556666666776653
Q ss_pred --HHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCC--CCccccCCCcEEEcCchhhhHHHHhccc
Q 043738 265 --FVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASK--HPVYELGAADLVVRHLDELSVVDLKNLA 333 (368)
Q Consensus 265 --~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~--~~~~~~~~ad~vv~sl~eL~~~~l~~L~ 333 (368)
...++++++..+.+|++|||+.+|+.+|+++|+.++ .+. ........+.+.+.++.|+... ++.+.
T Consensus 147 ~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a--~~~l~~~~~~~~~~~~~~~~f~ei~~~-l~~~~ 216 (219)
T PRK09552 147 CCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA--RDFLITKCEELGIPYTPFETFHDVQTE-LKHLL 216 (219)
T ss_pred CchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee--HHHHHHHHHHcCCCccccCCHHHHHHH-HHHHh
Confidence 457889999999999999999999999999999433 221 1111233478888999999766 44443
No 56
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.76 E-value=1.6e-17 Score=149.25 Aligned_cols=194 Identities=17% Similarity=0.159 Sum_probs=122.9
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhC-CCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEG-MKNEQAISEVLCWSRDPAELRRMASRMEEIYQA 196 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g-~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (368)
+++|+|||||||++ +.|..+++++|.+... . ...+ ......+...+.. +. ......+.+..
T Consensus 1 ~~~v~FD~DGTL~~-------~~~~~~~~~~g~~~~~-~---~~~~~~~~~~~~~~~~~~------l~-~~~~~~~~i~~ 62 (205)
T PRK13582 1 MEIVCLDLEGVLVP-------EIWIAFAEKTGIPELR-A---TTRDIPDYDVLMKQRLDI------LD-EHGLGLADIQE 62 (205)
T ss_pred CeEEEEeCCCCChh-------hHHHHHHHHcCChHHH-H---HhcCCCCHHHHHHHHHHH------HH-HcCCCHHHHHH
Confidence 47899999999993 2566777788864211 1 1111 1111111111100 00 00001111222
Q ss_pred HHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCC-C---CCCCCCCHHHHHHHHHHc
Q 043738 197 LQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAE-D---VHRGKPDPEMFVYAAQLL 272 (368)
Q Consensus 197 ~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e-~---v~~~KP~~~~~~~~le~l 272 (368)
.+. ...++||+.++|+.|++. ++++++|++....++..++++|+..+|+..+... + .+..++++.....+++++
T Consensus 63 ~~~-~~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~ 140 (205)
T PRK13582 63 VIA-TLDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKAL 140 (205)
T ss_pred HHH-hCCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCeEECccccccchHHHHHHHH
Confidence 222 257899999999999999 9999999999999999999999998886544322 1 111223344556666777
Q ss_pred CCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcE-EEcCchhhhHHHHhccc
Q 043738 273 KFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADL-VVRHLDELSVVDLKNLA 333 (368)
Q Consensus 273 gi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~-vv~sl~eL~~~~l~~L~ 333 (368)
+..+++|++|||+.+|+++++++|+.+. +........ ..+++ +++++.+|...+.+.++
T Consensus 141 ~~~~~~~v~iGDs~~D~~~~~aa~~~v~-~~~~~~~~~-~~~~~~~~~~~~el~~~l~~~~~ 200 (205)
T PRK13582 141 KSLGYRVIAAGDSYNDTTMLGEADAGIL-FRPPANVIA-EFPQFPAVHTYDELLAAIDKASA 200 (205)
T ss_pred HHhCCeEEEEeCCHHHHHHHHhCCCCEE-ECCCHHHHH-hCCcccccCCHHHHHHHHHHHHh
Confidence 7778999999999999999999998654 333221111 23454 89999999766655543
No 57
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.75 E-value=3.1e-17 Score=150.23 Aligned_cols=150 Identities=11% Similarity=0.073 Sum_probs=110.4
Q ss_pred CCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Q 043738 116 CGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQ 195 (368)
Q Consensus 116 ~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~ 195 (368)
++.-+|+|||||||+|+.+.+ .+|........++.+.|....+. |.
T Consensus 61 ~~p~aViFDlDgTLlDSs~~~----------~~G~~~~s~~~~~~l~g~~~w~~------------------------~~ 106 (237)
T TIGR01672 61 RPPIAVSFDIDDTVLFSSPGF----------WRGKKTFSPGSEDYLKNQVFWEK------------------------VN 106 (237)
T ss_pred CCCeEEEEeCCCccccCcHHH----------hCCcccCCHHHhhhhcChHHHHH------------------------HH
Confidence 334489999999999987533 15554322221333333322222 22
Q ss_pred HHHCCccccCccHHHHHHHHHhCCCcEEEEcCC----ChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHH
Q 043738 196 ALQGGIYRLRTGSKEFVNILMHYKIPMALVSTH----PRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQL 271 (368)
Q Consensus 196 ~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~----~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~ 271 (368)
........+.+++.++|+.++++|++++++||. ....++.+++++|+..+|+.+++++.....||++. .++++
T Consensus 107 ~~~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~Kp~~~---~~l~~ 183 (237)
T TIGR01672 107 NGWDEFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQYQYTKT---QWIQD 183 (237)
T ss_pred HhcccCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCCCCCHH---HHHHh
Confidence 222223466677999999999999999999998 66788899999999999999999988777787765 35566
Q ss_pred cCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCC
Q 043738 272 LKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKH 306 (368)
Q Consensus 272 lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~ 306 (368)
+++ +++|||+.+|+.+|+++|+.+|.+.++.
T Consensus 184 ~~i----~i~vGDs~~DI~aAk~AGi~~I~V~~g~ 214 (237)
T TIGR01672 184 KNI----RIHYGDSDNDITAAKEAGARGIRILRAS 214 (237)
T ss_pred CCC----eEEEeCCHHHHHHHHHCCCCEEEEEecC
Confidence 665 7999999999999999999999998443
No 58
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.74 E-value=2e-18 Score=150.86 Aligned_cols=107 Identities=10% Similarity=0.079 Sum_probs=97.3
Q ss_pred ccccCccHHHHHHHHHhCCCcEEEEcCC-ChHHHHHHHHHcCcc---------ccccEEEeCCCCCCCCCCHHHHHHHHH
Q 043738 201 IYRLRTGSKEFVNILMHYKIPMALVSTH-PRKTLETAIDSIGIE---------EYFTAIVAAEDVHRGKPDPEMFVYAAQ 270 (368)
Q Consensus 201 ~~~~~pg~~elL~~Lk~~Gi~vaivSn~-~~~~~~~~l~~~gl~---------~~Fd~iv~~e~v~~~KP~~~~~~~~le 270 (368)
...++||+.++|+.|+++|++++++||. ....++..++.+++. .+|+.++++++....||.+.+++.+.+
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~~ 122 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVNK 122 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhhh
Confidence 4689999999999999999999999998 888889999999998 999999999887777777788787777
Q ss_pred Hc--CCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCC
Q 043738 271 LL--KFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHP 307 (368)
Q Consensus 271 ~l--gi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~ 307 (368)
.+ |+.|++|+||||+..|+++|+++|+.++++.++..
T Consensus 123 ~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~~ 161 (174)
T TIGR01685 123 VDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPSGMD 161 (174)
T ss_pred cccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCCCcc
Confidence 77 89999999999999999999999999999987654
No 59
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.74 E-value=4.5e-17 Score=136.25 Aligned_cols=97 Identities=21% Similarity=0.347 Sum_probs=86.4
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCC--------hHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHc-C
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHP--------RKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLL-K 273 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~--------~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~l-g 273 (368)
.++||+.++|+.|++.|++++++||+. ...+...++++++. |+.++.+. ...||++++|..+++++ +
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~--~~~KP~~~~~~~~~~~~~~ 100 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP--IDVLYACP--HCRKPKPGMFLEALKRFNE 100 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC--EEEEEECC--CCCCCChHHHHHHHHHcCC
Confidence 678999999999999999999999998 77888999999986 44444444 56799999999999999 5
Q ss_pred CCCCcEEEEcC-CHhhHHHHHHcCCeEEEEc
Q 043738 274 FIPERCIVFGN-SNQTVEAAHDARMKCVAVA 303 (368)
Q Consensus 274 i~p~~~l~IGD-s~nDl~~A~~aG~~~I~v~ 303 (368)
++|++|++||| +.+|+.+|+++|+.+|+++
T Consensus 101 ~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~ 131 (132)
T TIGR01662 101 IDPEESVYVGDQDLTDLQAAKRAGLAFILVA 131 (132)
T ss_pred CChhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence 99999999999 6899999999999999975
No 60
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.73 E-value=2.4e-17 Score=142.78 Aligned_cols=103 Identities=14% Similarity=0.203 Sum_probs=92.4
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCC---------------hHHHHHHHHHcCccccccEEE-e----CCCCCCCCCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHP---------------RKTLETAIDSIGIEEYFTAIV-A----AEDVHRGKPD 261 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~---------------~~~~~~~l~~~gl~~~Fd~iv-~----~e~v~~~KP~ 261 (368)
..++||+.++|+.|+++|++++++||.. ...+...++++|+. |+.++ + +++....||+
T Consensus 28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~~~KP~ 105 (161)
T TIGR01261 28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNCDCRKPK 105 (161)
T ss_pred eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCCCCCCCC
Confidence 4789999999999999999999999963 45677888999997 87665 4 4778889999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCC
Q 043738 262 PEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKH 306 (368)
Q Consensus 262 ~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~ 306 (368)
+++|..+++++++++++|+||||+.+|+++|+++||+++++..+.
T Consensus 106 ~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~~ 150 (161)
T TIGR01261 106 IKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYDEEE 150 (161)
T ss_pred HHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEEChhh
Confidence 999999999999999999999999999999999999999998664
No 61
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.71 E-value=8.2e-17 Score=133.24 Aligned_cols=102 Identities=27% Similarity=0.447 Sum_probs=93.9
Q ss_pred ccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCC----------------CCCHHH
Q 043738 201 IYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRG----------------KPDPEM 264 (368)
Q Consensus 201 ~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~----------------KP~~~~ 264 (368)
...+++++.++|+.|+++|++++++|++....++..++.+++..+|+.+++.+..... ||++..
T Consensus 22 ~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (139)
T cd01427 22 ELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDK 101 (139)
T ss_pred cCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCHHH
Confidence 3689999999999999999999999999999999999999998889988887765444 999999
Q ss_pred HHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEE
Q 043738 265 FVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAV 302 (368)
Q Consensus 265 ~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v 302 (368)
+..++++++.+++++++|||+.+|+++++.+|+.++++
T Consensus 102 ~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 102 LLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139 (139)
T ss_pred HHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence 99999999999999999999999999999999998874
No 62
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=99.71 E-value=1.7e-16 Score=140.03 Aligned_cols=94 Identities=16% Similarity=0.203 Sum_probs=81.8
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCC--------------------CCCCCCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAED--------------------VHRGKPD 261 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~--------------------v~~~KP~ 261 (368)
..++||+.++|+.|+++|++++++|++....++..++++|+..+|+.+++++. ...+.+|
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~K 150 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCCK 150 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCCH
Confidence 58899999999999999999999999999999999999999999999987543 2234456
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCe
Q 043738 262 PEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMK 298 (368)
Q Consensus 262 ~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~ 298 (368)
+++++.+.++. +++++||||+.+|+.+|+++++-
T Consensus 151 ~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~ 184 (188)
T TIGR01489 151 GKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVV 184 (188)
T ss_pred HHHHHHHHhhc---CceEEEECCCcchhchHhcCCcc
Confidence 88888887765 79999999999999999999753
No 63
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.69 E-value=5.8e-16 Score=139.96 Aligned_cols=170 Identities=17% Similarity=0.203 Sum_probs=119.8
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCH--HHHHHHHHhcCCCHHHHHHHHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKN--EQAISEVLCWSRDPAELRRMASRMEEIY 194 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~--~~~~~~~l~~~~~~~~~~~l~~~~~~~~ 194 (368)
..++++|||||||++ ...+..+....|..........+...... ....... +..+...-.+..
T Consensus 4 ~~~L~vFD~D~TLi~------~~~~~~~~~~~g~~~~v~~~t~~~~~~~~~~~~~~~~~---------v~~l~g~~~~~v 68 (212)
T COG0560 4 MKKLAVFDLDGTLIN------AELIDELARGAGVGEEVLAITERAMRGELDFEESLRLR---------VALLKGLPVEVL 68 (212)
T ss_pred ccceEEEecccchhh------HHHHHHHHHHhCCHHHHHHHHHHHhcccccHHHHHHHH---------HHHhCCCCHHHH
Confidence 357999999999997 25677777777776544444333322221 1111111 111111111112
Q ss_pred HHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCC----------CCCCCCCHHH
Q 043738 195 QALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAED----------VHRGKPDPEM 264 (368)
Q Consensus 195 ~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~----------v~~~KP~~~~ 264 (368)
.+.......++||+.++++.+++.|++++|+|+++...++.+.+.+|++..+...+..++ ...++-|...
T Consensus 69 ~~~~~~~~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~ 148 (212)
T COG0560 69 EEVREEFLRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKA 148 (212)
T ss_pred HHHHHhcCcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHH
Confidence 222222168999999999999999999999999999999999999999987754443332 1233456888
Q ss_pred HHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEE
Q 043738 265 FVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVA 301 (368)
Q Consensus 265 ~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~ 301 (368)
+..+++++|+++++++++|||.||+.|...+|.+.+.
T Consensus 149 l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~ 185 (212)
T COG0560 149 LRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAV 185 (212)
T ss_pred HHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEe
Confidence 9999999999999999999999999999999987555
No 64
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=99.66 E-value=7.7e-16 Score=139.67 Aligned_cols=190 Identities=16% Similarity=0.169 Sum_probs=120.4
Q ss_pred EEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHh--CCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Q 043738 121 AIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIE--GMKNEQAISEVLCWSRDPAELRRMASRMEEIYQALQ 198 (368)
Q Consensus 121 VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~--g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~ 198 (368)
|+||+||||++.. .+..+++.++. .....+...+. .++..+.+...+.+..... . +.+.+.+
T Consensus 2 ~~fDFDgTit~~d------~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~e~~~~~~~~~~~~~-~--------~~~~~~~ 65 (214)
T TIGR03333 2 IICDFDGTITNND------NIISIMKQFAP-PEWEALKDGVLSKTLSIQEGVGRMFGLLPSSL-K--------EEITSFV 65 (214)
T ss_pred EEeccCCCCCcch------hHHHHHHHhCc-HHHHHHHHHHHcCCccHHHHHHHHHhhCCCch-H--------HHHHHHH
Confidence 7999999999744 22333333322 11222222221 2334555555443322221 1 1111211
Q ss_pred CCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccc---cEEEeCCCCCCCCCCHHHH----------
Q 043738 199 GGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYF---TAIVAAEDVHRGKPDPEMF---------- 265 (368)
Q Consensus 199 ~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~F---d~iv~~e~v~~~KP~~~~~---------- 265 (368)
.....++||+.++|+.|+++|++++|+|++....++.++++++...++ +.++.++.....+|++..+
T Consensus 66 ~~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K 145 (214)
T TIGR03333 66 LETAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCK 145 (214)
T ss_pred HhcCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCH
Confidence 123689999999999999999999999999999999999987544443 3444555555567766554
Q ss_pred HHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCC--CccccCCCcEEEcCchhhhHHH
Q 043738 266 VYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKH--PVYELGAADLVVRHLDELSVVD 328 (368)
Q Consensus 266 ~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~--~~~~~~~ad~vv~sl~eL~~~~ 328 (368)
..++++++..+++|+||||+.+|+.+|+.+|+ +++.+.- .......+.+...++.|+...+
T Consensus 146 ~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~--~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l 208 (214)
T TIGR03333 146 PSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDL--CFARDYLLNECEELGLNHAPFQDFYDVRKEL 208 (214)
T ss_pred HHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCe--eEehHHHHHHHHHcCCCccCcCCHHHHHHHH
Confidence 47777777788999999999999999999998 4443311 0122233566678888886654
No 65
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.66 E-value=5.7e-15 Score=132.77 Aligned_cols=186 Identities=18% Similarity=0.199 Sum_probs=117.1
Q ss_pred eEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCC-CHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Q 043738 119 LGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGM-KNEQAISEVLCWSRDPAELRRMASRMEEIYQAL 197 (368)
Q Consensus 119 k~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~-~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~ 197 (368)
++++|||||||++. .|..+....|... .... ..+. ...+....-+. +.+....-.+.+.+.
T Consensus 2 ~la~FDlD~TLi~~-------~w~~~~~~~g~~~--~~~~--~~~~~~~~~~~~~r~~-------ll~~~g~~~~~i~~~ 63 (203)
T TIGR02137 2 EIACLDLEGVLVPE-------IWIAFAEKTGIDA--LKAT--TRDIPDYDVLMKQRLR-------ILDEHGLKLGDIQEV 63 (203)
T ss_pred eEEEEeCCcccHHH-------HHHHHHHHcCCcH--HHHH--hcCCcCHHHHHHHHHH-------HHHHCCCCHHHHHHH
Confidence 56999999999952 5888888888532 1111 1111 11211111100 000001111222232
Q ss_pred HCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccE--------EEeCCCCCCCCCCHHHHHHHH
Q 043738 198 QGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTA--------IVAAEDVHRGKPDPEMFVYAA 269 (368)
Q Consensus 198 ~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~--------iv~~e~v~~~KP~~~~~~~~l 269 (368)
+. ...++||+.++|+.+++.+ +++|+|++....+..+++++|+..+|.. .+++... ..++.+..+...+
T Consensus 64 ~~-~i~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~~~-~~~~~K~~~l~~l 140 (203)
T TIGR02137 64 IA-TLKPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQL-RQKDPKRQSVIAF 140 (203)
T ss_pred HH-hCCCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeECeee-cCcchHHHHHHHH
Confidence 32 2588999999999999975 9999999999999999999999988862 2333222 2344445455555
Q ss_pred HHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCc-EEEcCchhhhHHHHh
Q 043738 270 QLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAAD-LVVRHLDELSVVDLK 330 (368)
Q Consensus 270 e~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad-~vv~sl~eL~~~~l~ 330 (368)
++.+. +|++||||.||+.|++.+|+++++.....-... .+| -++.+++||...+.+
T Consensus 141 ~~~~~---~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~--~~~~~~~~~~~~~~~~~~~ 197 (203)
T TIGR02137 141 KSLYY---RVIAAGDSYNDTTMLSEAHAGILFHAPENVIRE--FPQFPAVHTYEDLKREFLK 197 (203)
T ss_pred HhhCC---CEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHh--CCCCCcccCHHHHHHHHHH
Confidence 66553 799999999999999999999887543322221 222 356788888665543
No 66
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=99.66 E-value=7.9e-16 Score=134.03 Aligned_cols=97 Identities=11% Similarity=0.147 Sum_probs=85.2
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChH------------HHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHH
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRK------------TLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQ 270 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~------------~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le 270 (368)
.++||+.++|+.|++.|++++|+||.+.. .+...++++|+. ++.++++++....||++++|.++++
T Consensus 42 ~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~--~~~ii~~~~~~~~KP~p~~~~~~~~ 119 (166)
T TIGR01664 42 FLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP--IQVLAATHAGLYRKPMTGMWEYLQS 119 (166)
T ss_pred EecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC--EEEEEecCCCCCCCCccHHHHHHHH
Confidence 46899999999999999999999998653 467788999985 3667777766678999999999999
Q ss_pred HcC--CCCCcEEEEcCCH--------hhHHHHHHcCCeEEE
Q 043738 271 LLK--FIPERCIVFGNSN--------QTVEAAHDARMKCVA 301 (368)
Q Consensus 271 ~lg--i~p~~~l~IGDs~--------nDl~~A~~aG~~~I~ 301 (368)
++| +++++|++|||+. +|+++|+++|+.+++
T Consensus 120 ~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 120 QYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY 160 (166)
T ss_pred HcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence 999 9999999999986 699999999999865
No 67
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.64 E-value=6e-15 Score=129.55 Aligned_cols=193 Identities=16% Similarity=0.220 Sum_probs=129.5
Q ss_pred CceEEEEeccCccccCcchHHHHH---HHH-HHHHhCCCCCHHHHHHH----HhCCCHHHHHHHHHhcCCCHHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQA---WLT-LAQEEGKSPPPAFILRR----IEGMKNEQAISEVLCWSRDPAELRRMAS 188 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a---~~~-~~~~~g~~~~~~~~~~~----~~g~~~~~~~~~~l~~~~~~~~~~~l~~ 188 (368)
++++++||+|.||+.-...+...+ +.. +..++|+..+....+.. ..|....... ......+..+..
T Consensus 14 ~~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG~t~aGL~--~~~~~~d~deY~---- 87 (244)
T KOG3109|consen 14 NYKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYGLTMAGLK--AVGYIFDADEYH---- 87 (244)
T ss_pred cceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHhHHHHHHH--HhcccCCHHHHH----
Confidence 589999999999997655554333 223 33456766543332111 1111111100 001111111111
Q ss_pred HHHHHHHHHHC-CccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCC------CCCCC
Q 043738 189 RMEEIYQALQG-GIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVH------RGKPD 261 (368)
Q Consensus 189 ~~~~~~~~~~~-~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~------~~KP~ 261 (368)
+.+...+. ..+.+.+-.+.+|-.|+..+ .++.||+.+.++...++.+|+.+.|+.|++.+-.. .-||.
T Consensus 88 ---~~V~~~LPlq~LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np~~~~~vcKP~ 162 (244)
T KOG3109|consen 88 ---RFVHGRLPLQDLKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNPIEKTVVCKPS 162 (244)
T ss_pred ---HHhhccCcHhhcCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHhChHHhccceeEeeccCCCCCceeecCC
Confidence 11111111 11467777889998888764 89999999999999999999999999999876433 46999
Q ss_pred HHHHHHHHHHcCCC-CCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchh
Q 043738 262 PEMFVYAAQLLKFI-PERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDE 323 (368)
Q Consensus 262 ~~~~~~~le~lgi~-p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~e 323 (368)
+++|+.+.+..|++ |.+++||+||.++|+.|+++||+++.+...+...+ +|+++.+..+
T Consensus 163 ~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~~~~~~~---~d~~l~~ih~ 222 (244)
T KOG3109|consen 163 EEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTVLVGREHKIKG---VDYALEQIHN 222 (244)
T ss_pred HHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHhccceeEEEEeeecccc---hHHHHHHhhc
Confidence 99999999999998 99999999999999999999999999886554332 4444444333
No 68
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=99.63 E-value=6.2e-15 Score=129.03 Aligned_cols=95 Identities=19% Similarity=0.226 Sum_probs=79.9
Q ss_pred ccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCC------------CCCCCCCCHHHHHHH
Q 043738 201 IYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAE------------DVHRGKPDPEMFVYA 268 (368)
Q Consensus 201 ~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e------------~v~~~KP~~~~~~~~ 268 (368)
...++||+.++++.++++|++++|+|++....++..++++|+..+|...+..+ ....+..|...+..+
T Consensus 71 ~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~ 150 (177)
T TIGR01488 71 QVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKEL 150 (177)
T ss_pred cCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHHHH
Confidence 35789999999999999999999999999999999999999987775443321 122345567889999
Q ss_pred HHHcCCCCCcEEEEcCCHhhHHHHHHc
Q 043738 269 AQLLKFIPERCIVFGNSNQTVEAAHDA 295 (368)
Q Consensus 269 le~lgi~p~~~l~IGDs~nDl~~A~~a 295 (368)
++.+++++++|++|||+.+|+.|++.+
T Consensus 151 ~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 151 LEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 999999999999999999999999764
No 69
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=99.63 E-value=5.5e-15 Score=132.39 Aligned_cols=100 Identities=10% Similarity=0.081 Sum_probs=85.2
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccE-EE-------eCC---CCCCCCCCHHHHHHHHH
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTA-IV-------AAE---DVHRGKPDPEMFVYAAQ 270 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~-iv-------~~e---~v~~~KP~~~~~~~~le 270 (368)
..++|++.++++.++++|++++|+|++....++..++++|+..+|.. +. ++. ....+++|...++.+++
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~ 165 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELLA 165 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHHH
Confidence 37899999999999999999999999999999999999999887754 22 221 12345677888999999
Q ss_pred HcCCCCCcEEEEcCCHhhHHHHHHcCCeEEE
Q 043738 271 LLKFIPERCIVFGNSNQTVEAAHDARMKCVA 301 (368)
Q Consensus 271 ~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~ 301 (368)
+.++++++|++||||.+|+++++.+|..++.
T Consensus 166 ~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v 196 (202)
T TIGR01490 166 EEQIDLKDSYAYGDSISDLPLLSLVGHPYVV 196 (202)
T ss_pred HcCCCHHHcEeeeCCcccHHHHHhCCCcEEe
Confidence 9999999999999999999999999987654
No 70
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=99.59 E-value=1.8e-15 Score=141.05 Aligned_cols=124 Identities=19% Similarity=0.215 Sum_probs=100.9
Q ss_pred CccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCC---CCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 205 RTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDV---HRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 205 ~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v---~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
++++.+.++.|++.+++++++||.+..........+|+..+|+.+.++... ..+||++.+|..++++++++|++|++
T Consensus 122 y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~ 201 (257)
T TIGR01458 122 YQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEEAVM 201 (257)
T ss_pred HHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhhEEE
Confidence 567788899999889999999998777666666677888888876655432 24899999999999999999999999
Q ss_pred EcCCH-hhHHHHHHcCCeEEEEcCCC-Ccc--c--cCCCcEEEcCchhhhHHH
Q 043738 282 FGNSN-QTVEAAHDARMKCVAVASKH-PVY--E--LGAADLVVRHLDELSVVD 328 (368)
Q Consensus 282 IGDs~-nDl~~A~~aG~~~I~v~~~~-~~~--~--~~~ad~vv~sl~eL~~~~ 328 (368)
|||+. +|+.+|+++|+.+++|.++. ... + ...+|++++++.++...+
T Consensus 202 vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~l 254 (257)
T TIGR01458 202 IGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDLI 254 (257)
T ss_pred ECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHHH
Confidence 99996 99999999999999998653 221 1 134899999999997543
No 71
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=99.56 E-value=2.5e-15 Score=141.84 Aligned_cols=120 Identities=21% Similarity=0.213 Sum_probs=92.9
Q ss_pred cCccHHHHHHHHHhCCCcEEEEcCCChHHHH-HHHHHcCccccccEEE---eCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 043738 204 LRTGSKEFVNILMHYKIPMALVSTHPRKTLE-TAIDSIGIEEYFTAIV---AAEDVHRGKPDPEMFVYAAQLLKFIPERC 279 (368)
Q Consensus 204 ~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~-~~l~~~gl~~~Fd~iv---~~e~v~~~KP~~~~~~~~le~lgi~p~~~ 279 (368)
.++++.++++.|++.|+ ++++||.+..... ..+...|+..+|+.+. +.+....+||++.+|..+++++|++|++|
T Consensus 144 ~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~~~~ 222 (279)
T TIGR01452 144 SYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDPART 222 (279)
T ss_pred CHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCChhhE
Confidence 36789999999998887 7899997654431 2233456666666543 34455678999999999999999999999
Q ss_pred EEEcCCH-hhHHHHHHcCCeEEEEcCCCC-cccc----------CCCcEEEcCchhh
Q 043738 280 IVFGNSN-QTVEAAHDARMKCVAVASKHP-VYEL----------GAADLVVRHLDEL 324 (368)
Q Consensus 280 l~IGDs~-nDl~~A~~aG~~~I~v~~~~~-~~~~----------~~ad~vv~sl~eL 324 (368)
+||||+. +|+.+|+++||++|+|.++.. ..++ ..+|++++++.+|
T Consensus 223 lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 223 LMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred EEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 9999995 999999999999999985533 2222 2489999998875
No 72
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.56 E-value=8.4e-15 Score=131.70 Aligned_cols=90 Identities=27% Similarity=0.395 Sum_probs=80.4
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
.+++|++.++|+.|++.|++++++||.....+....+.+|+. +.++.+... +||.+.+|..+++.+++++.+|+|
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~---~~~v~a~~~--~kP~~k~~~~~i~~l~~~~~~v~~ 200 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF---DSIVFARVI--GKPEPKIFLRIIKELQVKPGEVAM 200 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC---SEEEEESHE--TTTHHHHHHHHHHHHTCTGGGEEE
T ss_pred CcchhhhhhhhhhhhccCcceeeeeccccccccccccccccc---ccccccccc--ccccchhHHHHHHHHhcCCCEEEE
Confidence 478899999999999999999999999999999999999993 433443322 799999999999999999999999
Q ss_pred EcCCHhhHHHHHHcC
Q 043738 282 FGNSNQTVEAAHDAR 296 (368)
Q Consensus 282 IGDs~nDl~~A~~aG 296 (368)
|||+.||+.|+++||
T Consensus 201 vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 201 VGDGVNDAPALKAAG 215 (215)
T ss_dssp EESSGGHHHHHHHSS
T ss_pred EccCHHHHHHHHhCc
Confidence 999999999999987
No 73
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.56 E-value=1.5e-14 Score=120.65 Aligned_cols=88 Identities=15% Similarity=0.151 Sum_probs=79.3
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCC-ChHHHHHHHHHcC-------ccccccEEEeCCCCCCCCCCHHHHHHHHHHcC-
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTH-PRKTLETAIDSIG-------IEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLK- 273 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~-~~~~~~~~l~~~g-------l~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lg- 273 (368)
.++||+.++|+.|+++|++++++||+ ....+...++.++ +..+|+.++++++ +|++++|..+++++|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~~----~pkp~~~~~a~~~lg~ 104 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYW----LPKSPRLVEIALKLNG 104 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcCC----CcHHHHHHHHHHHhcC
Confidence 56789999999999999999999999 8888888899888 8899999888864 488999999999999
Q ss_pred -CCCCcEEEEcCCHhhHHHHHH
Q 043738 274 -FIPERCIVFGNSNQTVEAAHD 294 (368)
Q Consensus 274 -i~p~~~l~IGDs~nDl~~A~~ 294 (368)
+.|++|+||||+..|+...++
T Consensus 105 ~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 105 VLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred CCCcceEEEECCCHhHHHHHHh
Confidence 999999999999999877654
No 74
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=99.55 E-value=5.1e-14 Score=135.89 Aligned_cols=101 Identities=16% Similarity=0.224 Sum_probs=88.0
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCC---------------ChHHHHHHHHHcCccccccEEEe-----CCCCCCCCCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTH---------------PRKTLETAIDSIGIEEYFTAIVA-----AEDVHRGKPD 261 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~---------------~~~~~~~~l~~~gl~~~Fd~iv~-----~e~v~~~KP~ 261 (368)
..++||+.++|+.|++.|++++|+||. ....+...++.+|+. |+.++. +++....||+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~--fd~i~i~~~~~sd~~~~rKP~ 106 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK--FDEVLICPHFPEDNCSCRKPK 106 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc--eeeEEEeCCcCcccCCCCCCC
Confidence 488999999999999999999999995 244566677888884 776643 3566788999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcC
Q 043738 262 PEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVAS 304 (368)
Q Consensus 262 ~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~ 304 (368)
+.++..+++++++++++++||||+.+|+++|+++||++|+++.
T Consensus 107 p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v~~ 149 (354)
T PRK05446 107 TGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRYAR 149 (354)
T ss_pred HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEC
Confidence 9999999999999999999999999999999999999999964
No 75
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=99.55 E-value=7.5e-14 Score=127.85 Aligned_cols=96 Identities=13% Similarity=0.211 Sum_probs=80.3
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCC----hHHHHHHHHHcCc--cccccEEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHP----RKTLETAIDSIGI--EEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFI 275 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~----~~~~~~~l~~~gl--~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~ 275 (368)
..++||++++|+.++++|++++++||.. ...++.+++.+|+ ..+|+.+++++.. .|+++.. .++++++
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--~K~~K~~---~l~~~~i- 186 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--GQYTKTQ---WLKKKNI- 186 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC--CCCCHHH---HHHhcCC-
Confidence 5788999999999999999999999953 5577778888999 8899999888764 5665543 5556665
Q ss_pred CCcEEEEcCCHhhHHHHHHcCCeEEEEcCCC
Q 043738 276 PERCIVFGNSNQTVEAAHDARMKCVAVASKH 306 (368)
Q Consensus 276 p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~ 306 (368)
+++|||+.+|+.+|+++|+.+|.+.++.
T Consensus 187 ---~I~IGDs~~Di~aA~~AGi~~I~v~~G~ 214 (237)
T PRK11009 187 ---RIFYGDSDNDITAAREAGARGIRILRAA 214 (237)
T ss_pred ---eEEEcCCHHHHHHHHHcCCcEEEEecCC
Confidence 8999999999999999999999998543
No 76
>PRK11590 hypothetical protein; Provisional
Probab=99.55 E-value=3.8e-13 Score=121.76 Aligned_cols=177 Identities=10% Similarity=0.047 Sum_probs=114.3
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHH-HHhCCCCCHHHHHHHHhCCCHHHHHHH-H------H---hcCCCHHHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLA-QEEGKSPPPAFILRRIEGMKNEQAISE-V------L---CWSRDPAELRRM 186 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~-~~~g~~~~~~~~~~~~~g~~~~~~~~~-~------l---~~~~~~~~~~~l 186 (368)
.++++||+||||++ .+... .+..++ +++|+............|......... . + ....+...+..+
T Consensus 6 ~k~~iFD~DGTL~~--~d~~~-~~~~~~~~~~g~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 82 (211)
T PRK11590 6 RRVVFFDLDGTLHQ--QDMFG-SFLRYLLRRQPLNLLLVLPLLPVIGLGLLVKGRAARWPMSLLLWGCTFGHSEARLQAL 82 (211)
T ss_pred ceEEEEecCCCCcc--cchHH-HHHHHHHHhcchhhHHHhHHHHHhccCcccchhhhhhhHHHHHHHHHcCCCHHHHHHH
Confidence 47899999999994 33443 444444 778766444333455556543332211 0 0 113356667777
Q ss_pred HHHHHHHHHHHHCCccccCccHHHHH-HHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCC--------CCCC
Q 043738 187 ASRMEEIYQALQGGIYRLRTGSKEFV-NILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAE--------DVHR 257 (368)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~pg~~elL-~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e--------~v~~ 257 (368)
.+.+.+.|... ..++||+.++| +.+++.|++++|+|+++...++.++..+|+.. .+.+++.+ -.+.
T Consensus 83 ~~~f~~~~~~~----~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~~~~tg~~~g~ 157 (211)
T PRK11590 83 EADFVRWFRDN----VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQRRYGGWVLTL 157 (211)
T ss_pred HHHHHHHHHHh----CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEEEEEccEECCc
Confidence 77776666543 46699999999 57888999999999999999999999988632 23333332 1000
Q ss_pred CCCCHHH-HHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcC
Q 043738 258 GKPDPEM-FVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVAS 304 (368)
Q Consensus 258 ~KP~~~~-~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~ 304 (368)
-...+. ...+.+.++.+...+.+.|||.+|++|..-+|-. ++|+.
T Consensus 158 -~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~-~~vnp 203 (211)
T PRK11590 158 -RCLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHR-WRVTP 203 (211)
T ss_pred -cCCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCC-EEECc
Confidence 011111 3334444577788899999999999999999965 44443
No 77
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.54 E-value=3.5e-14 Score=135.18 Aligned_cols=104 Identities=13% Similarity=0.118 Sum_probs=96.6
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccc-cccEEEeCC-------CCCCCCCCHHHHHHHHHHcC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEE-YFTAIVAAE-------DVHRGKPDPEMFVYAAQLLK 273 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~-~Fd~iv~~e-------~v~~~KP~~~~~~~~le~lg 273 (368)
..++|++.++|+.|++.|++++++||.+....+..++++++.. +|+.+++.+ +....||+++++..++++++
T Consensus 186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~~ 265 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEKI 265 (300)
T ss_pred CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHHh
Confidence 4789999999999999999999999999999999999999997 999998887 45568999999999999998
Q ss_pred C-CCCcEEEEcCCHhhHHHHHHcCCeEEEEcCC
Q 043738 274 F-IPERCIVFGNSNQTVEAAHDARMKCVAVASK 305 (368)
Q Consensus 274 i-~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~ 305 (368)
. .+++|++|||+.+|+++|+++||.+|+|.++
T Consensus 266 ~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g 298 (300)
T PHA02530 266 APKYDVLLAVDDRDQVVDMWRRIGLECWQVAPG 298 (300)
T ss_pred ccCceEEEEEcCcHHHHHHHHHhCCeEEEecCC
Confidence 8 6899999999999999999999999999765
No 78
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.51 E-value=4.9e-14 Score=124.80 Aligned_cols=109 Identities=20% Similarity=0.259 Sum_probs=87.1
Q ss_pred HHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHH
Q 043738 211 FVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVE 290 (368)
Q Consensus 211 lL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~ 290 (368)
.++.|+++|++++++||.....+...++++|+..+|+. .++++..+..+++++|+.+++|+||||+.+|+.
T Consensus 56 ~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~g---------~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~ 126 (183)
T PRK09484 56 GIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHLYQG---------QSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWP 126 (183)
T ss_pred HHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCceeecC---------CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 45666788999999999999999999999998877751 356789999999999999999999999999999
Q ss_pred HHHHcCCeEEEEcCCCCccccCCCcEEEc------CchhhhHHHHh
Q 043738 291 AAHDARMKCVAVASKHPVYELGAADLVVR------HLDELSVVDLK 330 (368)
Q Consensus 291 ~A~~aG~~~I~v~~~~~~~~~~~ad~vv~------sl~eL~~~~l~ 330 (368)
+++++|+.++ +.... ......|+++++ .+.|+...++.
T Consensus 127 ~a~~aG~~~~-v~~~~-~~~~~~a~~v~~~~~g~g~~~el~~~i~~ 170 (183)
T PRK09484 127 VMEKVGLSVA-VADAH-PLLLPRADYVTRIAGGRGAVREVCDLLLL 170 (183)
T ss_pred HHHHCCCeEe-cCChh-HHHHHhCCEEecCCCCCCHHHHHHHHHHH
Confidence 9999999854 43222 122234899997 56777655543
No 79
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=99.49 E-value=2.4e-13 Score=118.99 Aligned_cols=97 Identities=15% Similarity=0.155 Sum_probs=84.2
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCC-hHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHP-RKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~-~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
.++||+.++|+.|++.|++++++||.. ...+..+++.+|+..++ ...||++++|..+++++++++++|++
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~~---------~~~KP~p~~~~~~l~~~~~~~~~~l~ 113 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVLP---------HAVKPPGCAFRRAHPEMGLTSEQVAV 113 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEEc---------CCCCCChHHHHHHHHHcCCCHHHEEE
Confidence 667999999999999999999999998 56677777777765321 34699999999999999999999999
Q ss_pred EcCCH-hhHHHHHHcCCeEEEEcCCCCc
Q 043738 282 FGNSN-QTVEAAHDARMKCVAVASKHPV 308 (368)
Q Consensus 282 IGDs~-nDl~~A~~aG~~~I~v~~~~~~ 308 (368)
|||+. .|+.+|+++||.+|++.++...
T Consensus 114 IGDs~~~Di~aA~~aGi~~i~v~~g~~~ 141 (170)
T TIGR01668 114 VGDRLFTDVMGGNRNGSYTILVEPLVHP 141 (170)
T ss_pred ECCcchHHHHHHHHcCCeEEEEccCcCC
Confidence 99998 7999999999999999866543
No 80
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.46 E-value=3.1e-13 Score=116.60 Aligned_cols=161 Identities=16% Similarity=0.191 Sum_probs=115.4
Q ss_pred CCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCC--CHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Q 043738 116 CGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGM--KNEQAISEVLCWSRDPAELRRMASRMEEI 193 (368)
Q Consensus 116 ~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~--~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ 193 (368)
+..++|+||+|.|++. .+.+++++...|.......+.++.++. +.++.+..-+ .+.+.....
T Consensus 14 ~~~~aVcFDvDSTvi~------eEgIdelA~~~G~~~~Va~~T~rAMng~~~F~eaL~~Rl----------~llqp~~~q 77 (227)
T KOG1615|consen 14 RSADAVCFDVDSTVIQ------EEGIDELAAYCGVGEAVAEVTRRAMNGEADFQEALAARL----------SLLQPLQVQ 77 (227)
T ss_pred HhcCeEEEecCcchhH------HhhHHHHHHHhCchHHHHHHHHHHhCCCCcHHHHHHHHH----------HHhcccHHH
Confidence 3458999999999995 257888888889887777776666653 3344433322 111111222
Q ss_pred HHH-HHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccc--ccc--------EEEeC-C---CCCCC
Q 043738 194 YQA-LQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEE--YFT--------AIVAA-E---DVHRG 258 (368)
Q Consensus 194 ~~~-~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~--~Fd--------~iv~~-e---~v~~~ 258 (368)
... .......+.||+++|++.|+++|.+++++|+++..++....+.+|+.. .|. .-+.+ + -...+
T Consensus 78 v~~~v~~~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsds 157 (227)
T KOG1615|consen 78 VEQFVIKQKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDS 157 (227)
T ss_pred HHHHHhcCCCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccC
Confidence 222 223347899999999999999999999999999999999999999875 221 22222 1 12234
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHH
Q 043738 259 KPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHD 294 (368)
Q Consensus 259 KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~ 294 (368)
.-|++.+..+.+ +.+.+.+++|||+.||++|...
T Consensus 158 ggKa~~i~~lrk--~~~~~~~~mvGDGatDlea~~p 191 (227)
T KOG1615|consen 158 GGKAEVIALLRK--NYNYKTIVMVGDGATDLEAMPP 191 (227)
T ss_pred CccHHHHHHHHh--CCChheeEEecCCccccccCCc
Confidence 456888888887 8888999999999999998777
No 81
>PRK10444 UMP phosphatase; Provisional
Probab=99.43 E-value=1.4e-13 Score=127.59 Aligned_cols=74 Identities=15% Similarity=0.238 Sum_probs=62.4
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCH-hhHHHHHHcCCeEEEEcCCCC-cccc----CCCcEEEcCchhhh
Q 043738 252 AEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSN-QTVEAAHDARMKCVAVASKHP-VYEL----GAADLVVRHLDELS 325 (368)
Q Consensus 252 ~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~-nDl~~A~~aG~~~I~v~~~~~-~~~~----~~ad~vv~sl~eL~ 325 (368)
.+....+||++++|..+++++++++++|++|||+. +|+.+|+++|+.+++|.++.. ..++ ..+|++++++.++.
T Consensus 167 ~~~~~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el~ 246 (248)
T PRK10444 167 RKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADID 246 (248)
T ss_pred CCccccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHhh
Confidence 34455689999999999999999999999999997 899999999999999985543 2332 24899999999883
No 82
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=99.43 E-value=8.9e-14 Score=129.08 Aligned_cols=79 Identities=23% Similarity=0.250 Sum_probs=64.8
Q ss_pred ccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCH-hhHHHHHHcCCeEEEEcCCCCc-ccc----CCCcEEEc
Q 043738 246 FTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSN-QTVEAAHDARMKCVAVASKHPV-YEL----GAADLVVR 319 (368)
Q Consensus 246 Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~-nDl~~A~~aG~~~I~v~~~~~~-~~~----~~ad~vv~ 319 (368)
+....+.+.+..+||++++|+.+++.++++++++++|||+. +|+.+|+++|+.+++|.++... .++ ..+|++++
T Consensus 165 i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~ 244 (249)
T TIGR01457 165 LEVATGVKPVYIGKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAGLPIAPTHVVS 244 (249)
T ss_pred HHHHhCCCccccCCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhcCCCCCCEEeC
Confidence 44445566677889999999999999999999999999997 8999999999999999865432 222 24899999
Q ss_pred Cchhh
Q 043738 320 HLDEL 324 (368)
Q Consensus 320 sl~eL 324 (368)
++.++
T Consensus 245 ~l~~~ 249 (249)
T TIGR01457 245 SLAEW 249 (249)
T ss_pred ChhhC
Confidence 88764
No 83
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.42 E-value=1.4e-12 Score=122.15 Aligned_cols=116 Identities=11% Similarity=0.107 Sum_probs=75.0
Q ss_pred CccHHHHHHHHHhCCCcEEEEcCCCh-----HHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 043738 205 RTGSKEFVNILMHYKIPMALVSTHPR-----KTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERC 279 (368)
Q Consensus 205 ~pg~~elL~~Lk~~Gi~vaivSn~~~-----~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~ 279 (368)
++++.+++..++..+..+.++++... .....+.+.+++...+.....-+....+..|+.+++.+++++|+++++|
T Consensus 139 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e~ 218 (272)
T PRK10530 139 FTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMKNV 218 (272)
T ss_pred eEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhhcCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHe
Confidence 45566777777666666666665431 2333444455543211100011223344457889999999999999999
Q ss_pred EEEcCCHhhHHHHHHcCCeEEEEcCCCCcccc-CCCcEEEcCchh
Q 043738 280 IVFGNSNQTVEAAHDARMKCVAVASKHPVYEL-GAADLVVRHLDE 323 (368)
Q Consensus 280 l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~-~~ad~vv~sl~e 323 (368)
++|||+.||++|++.+|+.+++-++ ..++ ..||+++++.++
T Consensus 219 i~~GD~~NDi~m~~~ag~~vamgna---~~~lk~~Ad~v~~~n~~ 260 (272)
T PRK10530 219 VAFGDNFNDISMLEAAGLGVAMGNA---DDAVKARADLVIGDNTT 260 (272)
T ss_pred EEeCCChhhHHHHHhcCceEEecCc---hHHHHHhCCEEEecCCC
Confidence 9999999999999999986555322 2233 359999977664
No 84
>PLN02645 phosphoglycolate phosphatase
Probab=99.41 E-value=1.5e-13 Score=131.63 Aligned_cols=113 Identities=16% Similarity=0.142 Sum_probs=82.6
Q ss_pred HHHhCCCcEEEEcCCChHH-HHHHHHHcCccccccEEEeCCCC---CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCH-hh
Q 043738 214 ILMHYKIPMALVSTHPRKT-LETAIDSIGIEEYFTAIVAAEDV---HRGKPDPEMFVYAAQLLKFIPERCIVFGNSN-QT 288 (368)
Q Consensus 214 ~Lk~~Gi~vaivSn~~~~~-~~~~l~~~gl~~~Fd~iv~~e~v---~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~-nD 288 (368)
.++.++-..+++||.+... ....+..+|...+|+.+.++... ..+||++.+|..++++++++++++++|||+. +|
T Consensus 181 ~l~~~~g~~~i~tn~d~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~D 260 (311)
T PLN02645 181 CIRENPGCLFIATNRDAVTHLTDAQEWAGAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIEKSQICMVGDRLDTD 260 (311)
T ss_pred HHhcCCCCEEEEeCCCCCCCCCCCCCccchHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCCcccEEEEcCCcHHH
Confidence 3433223577777766433 22333455666677766665442 2479999999999999999999999999997 99
Q ss_pred HHHHHHcCCeEEEEcCCC-Ccccc------CCCcEEEcCchhhhH
Q 043738 289 VEAAHDARMKCVAVASKH-PVYEL------GAADLVVRHLDELSV 326 (368)
Q Consensus 289 l~~A~~aG~~~I~v~~~~-~~~~~------~~ad~vv~sl~eL~~ 326 (368)
+.+|+++|+++|+|.++. ...++ ..+|++++++.+|..
T Consensus 261 i~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~ 305 (311)
T PLN02645 261 ILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFLT 305 (311)
T ss_pred HHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHHH
Confidence 999999999999997543 22221 248999999999864
No 85
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=99.41 E-value=7.2e-12 Score=114.27 Aligned_cols=171 Identities=13% Similarity=0.111 Sum_probs=111.9
Q ss_pred EEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHH--HHHHHHHHH
Q 043738 120 GAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMAS--RMEEIYQAL 197 (368)
Q Consensus 120 ~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~--~~~~~~~~~ 197 (368)
+|+||||+||+|.+. -..+.+.++.......+...+......+.+..++. .+.. ...+.+.+.
T Consensus 2 LvvfDFD~TIvd~ds------d~~v~~~l~~~~~~~~l~~~~~~~~wt~~m~~vl~---------~L~~~gvt~~~I~~~ 66 (234)
T PF06888_consen 2 LVVFDFDHTIVDQDS------DDWVIELLPPEELPEELRESYPKGGWTEYMDRVLQ---------LLHEQGVTPEDIRDA 66 (234)
T ss_pred EEEEeCCCCccCCcc------HHHHHHhcCCcccHHHHHHhccccchHHHHHHHHH---------HHHHcCCCHHHHHHH
Confidence 689999999998653 23445555554433333233221112222222221 1100 011223333
Q ss_pred HCCccccCccHHHHHHHH--HhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCC---------------C-----
Q 043738 198 QGGIYRLRTGSKEFVNIL--MHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAED---------------V----- 255 (368)
Q Consensus 198 ~~~~~~~~pg~~elL~~L--k~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~---------------v----- 255 (368)
+. .+++.||+.++++.+ +..|+.++|+|++...+++.+|++.|+...|+.|++-.. .
T Consensus 67 l~-~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C 145 (234)
T PF06888_consen 67 LR-SIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLC 145 (234)
T ss_pred HH-cCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCceEEEeCccCCCCCcC
Confidence 33 369999999999999 457999999999999999999999999999988876310 0
Q ss_pred CCCCCCHHHHHHHHHH---cCCCCCcEEEEcCCHhhHHHHHHcCCe-EEEEcCCC
Q 043738 256 HRGKPDPEMFVYAAQL---LKFIPERCIVFGNSNQTVEAAHDARMK-CVAVASKH 306 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~---lgi~p~~~l~IGDs~nDl~~A~~aG~~-~I~v~~~~ 306 (368)
+..--|..++..+++. -|+..++++|||||.||+-++...+-. .++...+.
T Consensus 146 ~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R~~~ 200 (234)
T PF06888_consen 146 PPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPRKGY 200 (234)
T ss_pred CCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecCCCC
Confidence 1112456777777776 478889999999999999999887765 34444443
No 86
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=99.40 E-value=1.9e-12 Score=109.52 Aligned_cols=89 Identities=20% Similarity=0.309 Sum_probs=79.8
Q ss_pred ccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCC
Q 043738 206 TGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNS 285 (368)
Q Consensus 206 pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs 285 (368)
|.+++-+.+++..|+++.|+||.....+....+++|+. .++ ...||-+..|..+++++++++++|++|||.
T Consensus 49 pe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~----fi~-----~A~KP~~~~fr~Al~~m~l~~~~vvmVGDq 119 (175)
T COG2179 49 PELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP----FIY-----RAKKPFGRAFRRALKEMNLPPEEVVMVGDQ 119 (175)
T ss_pred HHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc----eee-----cccCccHHHHHHHHHHcCCChhHEEEEcch
Confidence 44557788899999999999999999999999999876 333 348999999999999999999999999999
Q ss_pred H-hhHHHHHHcCCeEEEEc
Q 043738 286 N-QTVEAAHDARMKCVAVA 303 (368)
Q Consensus 286 ~-nDl~~A~~aG~~~I~v~ 303 (368)
. .|+-+++.+||.+|.|.
T Consensus 120 L~TDVlggnr~G~~tIlV~ 138 (175)
T COG2179 120 LFTDVLGGNRAGMRTILVE 138 (175)
T ss_pred hhhhhhcccccCcEEEEEE
Confidence 9 89999999999999987
No 87
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.37 E-value=9.3e-13 Score=112.57 Aligned_cols=95 Identities=13% Similarity=0.111 Sum_probs=87.1
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccc-cccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEE-YFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCI 280 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~-~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l 280 (368)
+.++||+.++|+.|+ .+++++|+|++....++..++++++.. +|+.+++++++...||+ |..+++++|.+|++|+
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~~KP~---~~k~l~~l~~~p~~~i 119 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVFVKGK---YVKDLSLLGRDLSNVI 119 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccccCCe---EeecHHHcCCChhcEE
Confidence 588999999999999 569999999999999999999999865 56999999999999987 9999999999999999
Q ss_pred EEcCCHhhHHHHHHcCCeEE
Q 043738 281 VFGNSNQTVEAAHDARMKCV 300 (368)
Q Consensus 281 ~IGDs~nDl~~A~~aG~~~I 300 (368)
+|||+.+|+.++.++|+.+-
T Consensus 120 ~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 120 IIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred EEECCHHHhhcCccCEEEec
Confidence 99999999999999997543
No 88
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.36 E-value=1.8e-12 Score=112.94 Aligned_cols=99 Identities=13% Similarity=0.164 Sum_probs=85.1
Q ss_pred HHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHH
Q 043738 211 FVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVE 290 (368)
Q Consensus 211 lL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~ 290 (368)
-++.|++.|++++|+||.....++..++++|+..+|+.+ ||+++.+..+++++++++++|++|||+.||+.
T Consensus 42 ~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~~~---------kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~ 112 (169)
T TIGR02726 42 GVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHEGI---------KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLS 112 (169)
T ss_pred HHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEecC---------CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHH
Confidence 466778899999999999999999999999999888742 78999999999999999999999999999999
Q ss_pred HHHHcCCeEEEEcCCCCccccCCCcEEEcC
Q 043738 291 AAHDARMKCVAVASKHPVYELGAADLVVRH 320 (368)
Q Consensus 291 ~A~~aG~~~I~v~~~~~~~~~~~ad~vv~s 320 (368)
|++.+|+++++-+..... ...|++++.+
T Consensus 113 ~~~~ag~~~am~nA~~~l--k~~A~~I~~~ 140 (169)
T TIGR02726 113 MMKRVGLAVAVGDAVADV--KEAAAYVTTA 140 (169)
T ss_pred HHHHCCCeEECcCchHHH--HHhCCEEcCC
Confidence 999999987775544322 2348888764
No 89
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=99.35 E-value=2.9e-11 Score=105.50 Aligned_cols=121 Identities=21% Similarity=0.261 Sum_probs=94.8
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCC---------------hHHHHHHHHHcCccccccEEEeCC-----CCCCCCCCH
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHP---------------RKTLETAIDSIGIEEYFTAIVAAE-----DVHRGKPDP 262 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~---------------~~~~~~~l~~~gl~~~Fd~iv~~e-----~v~~~KP~~ 262 (368)
.+.||+.+.+..+++.|++++++||.+ ...+...++..|. .|+.++.+- ...+.||++
T Consensus 31 ~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv--~id~i~~Cph~p~~~c~cRKP~~ 108 (181)
T COG0241 31 QFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGV--KIDGILYCPHHPEDNCDCRKPKP 108 (181)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCCCCCcccCCCh
Confidence 667899999999999999999999942 2233444555565 378777653 246789999
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccC--CCcEEEcCchhhh
Q 043738 263 EMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELG--AADLVVRHLDELS 325 (368)
Q Consensus 263 ~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~--~ad~vv~sl~eL~ 325 (368)
.++..+++++++++++.++|||...|+++|.++|++.+.+..+....... .++.+.+++.++.
T Consensus 109 gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (181)
T COG0241 109 GMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTGIGVTTDGAGRAKWVFDSLAEFA 173 (181)
T ss_pred HHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEcCcccccccccccccccccHHHHH
Confidence 99999999999999999999999999999999999977766443332222 3677888888776
No 90
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=99.34 E-value=1.5e-11 Score=114.66 Aligned_cols=95 Identities=18% Similarity=0.284 Sum_probs=82.6
Q ss_pred ccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEE------EeCCCCCCCCCCH---------HHH
Q 043738 201 IYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAI------VAAEDVHRGKPDP---------EMF 265 (368)
Q Consensus 201 ~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~i------v~~e~v~~~KP~~---------~~~ 265 (368)
.+.+.||+.+|++.|+++|++++|+|++....++..++++|+...+..+ +..+.+..++|.| .++
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~ 198 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVA 198 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHH
Confidence 4799999999999999999999999999999999999999987666666 4455555667666 667
Q ss_pred HHHHHHcC--CCCCcEEEEcCCHhhHHHHHHc
Q 043738 266 VYAAQLLK--FIPERCIVFGNSNQTVEAAHDA 295 (368)
Q Consensus 266 ~~~le~lg--i~p~~~l~IGDs~nDl~~A~~a 295 (368)
..++++++ ..+++|++||||.+|+.||..+
T Consensus 199 ~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 199 LRNTEYFNQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred HHHHHHhCccCCcceEEEECcChhhhhHhcCC
Confidence 78899998 8999999999999999998776
No 91
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.29 E-value=8.7e-12 Score=107.28 Aligned_cols=101 Identities=21% Similarity=0.285 Sum_probs=86.0
Q ss_pred HHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHH
Q 043738 211 FVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVE 290 (368)
Q Consensus 211 lL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~ 290 (368)
.|+.|+++|++++|+||.+...+...++++|+..+|+. .+|+++.+..+++++|+++++|++|||+.||+.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~~---------~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~ 106 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQG---------QSNKLIAFSDILEKLALAPENVAYIGDDLIDWP 106 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEec---------ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 78899999999999999999999999999999887753 268899999999999999999999999999999
Q ss_pred HHHHcCCeEEEEcCCCCccccCCCcEEEcCch
Q 043738 291 AAHDARMKCVAVASKHPVYELGAADLVVRHLD 322 (368)
Q Consensus 291 ~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~ 322 (368)
|++.+|+. +++...... ....|++++.+..
T Consensus 107 ~~~~ag~~-~~v~~~~~~-~~~~a~~i~~~~~ 136 (154)
T TIGR01670 107 VMEKVGLS-VAVADAHPL-LIPRADYVTRIAG 136 (154)
T ss_pred HHHHCCCe-EecCCcCHH-HHHhCCEEecCCC
Confidence 99999997 565544332 2234888887664
No 92
>PRK08238 hypothetical protein; Validated
Probab=99.28 E-value=9.3e-11 Score=118.06 Aligned_cols=98 Identities=11% Similarity=0.155 Sum_probs=81.5
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
.+++||+.++++.++++|++++++|+++...++..++++|+ ||.++++++....||+++. ..+.+.++ .+++++
T Consensus 71 lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl---Fd~Vigsd~~~~~kg~~K~-~~l~~~l~--~~~~~y 144 (479)
T PRK08238 71 LPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL---FDGVFASDGTTNLKGAAKA-AALVEAFG--ERGFDY 144 (479)
T ss_pred CCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC---CCEEEeCCCccccCCchHH-HHHHHHhC--ccCeeE
Confidence 46789999999999999999999999999999999999987 9999999887666665543 23445555 356899
Q ss_pred EcCCHhhHHHHHHcCCeEEEEcCCC
Q 043738 282 FGNSNQTVEAAHDARMKCVAVASKH 306 (368)
Q Consensus 282 IGDs~nDl~~A~~aG~~~I~v~~~~ 306 (368)
+||+.+|+++++.+| +.+.|+...
T Consensus 145 vGDS~~Dlp~~~~A~-~av~Vn~~~ 168 (479)
T PRK08238 145 AGNSAADLPVWAAAR-RAIVVGASP 168 (479)
T ss_pred ecCCHHHHHHHHhCC-CeEEECCCH
Confidence 999999999999999 667777443
No 93
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=99.28 E-value=1.6e-11 Score=92.48 Aligned_cols=68 Identities=34% Similarity=0.493 Sum_probs=60.1
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCC-HhhHHHHHHcCCeEEEEcCCCCcc-cc----CCCcEEEcCchhh
Q 043738 257 RGKPDPEMFVYAAQLLKFIPERCIVFGNS-NQTVEAAHDARMKCVAVASKHPVY-EL----GAADLVVRHLDEL 324 (368)
Q Consensus 257 ~~KP~~~~~~~~le~lgi~p~~~l~IGDs-~nDl~~A~~aG~~~I~v~~~~~~~-~~----~~ad~vv~sl~eL 324 (368)
.+||++.+|..+++++++++++|++|||+ .+|+.+|+++|+.+|+|..+.... .. ..+|++++++.|+
T Consensus 2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e~ 75 (75)
T PF13242_consen 2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKEA 75 (75)
T ss_dssp CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGGH
T ss_pred CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHhC
Confidence 58999999999999999999999999999 799999999999999999655432 22 3599999999885
No 94
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=99.27 E-value=2.6e-11 Score=122.71 Aligned_cols=93 Identities=13% Similarity=0.186 Sum_probs=82.1
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCCh------------HHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHH
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPR------------KTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQ 270 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~------------~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le 270 (368)
.++||+.+.|+.|++.|++++|+||... ..+..+++++|+. |+.+++.+.....||++.++.++++
T Consensus 197 ~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdviia~~~~~~RKP~pGm~~~a~~ 274 (526)
T TIGR01663 197 IIFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQVFIAIGAGFYRKPLTGMWDHLKE 274 (526)
T ss_pred ecccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEEEEeCCCCCCCCCCHHHHHHHHH
Confidence 3579999999999999999999999765 3577888899986 8988888877888999999999999
Q ss_pred HcC----CCCCcEEEEcCCHhhHHHHHHcCC
Q 043738 271 LLK----FIPERCIVFGNSNQTVEAAHDARM 297 (368)
Q Consensus 271 ~lg----i~p~~~l~IGDs~nDl~~A~~aG~ 297 (368)
+++ +++++++||||...|+.++..+|.
T Consensus 275 ~~~~~~~Id~~~S~~VGDaagr~~~g~~ag~ 305 (526)
T TIGR01663 275 EANDGTEIQEDDCFFVGDAAGRPANGKAAGK 305 (526)
T ss_pred hcCcccCCCHHHeEEeCCcccchHHHHhcCC
Confidence 985 899999999999999888877775
No 95
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.27 E-value=3e-11 Score=116.25 Aligned_cols=90 Identities=16% Similarity=0.110 Sum_probs=82.9
Q ss_pred cCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHH----cCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 043738 204 LRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDS----IGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERC 279 (368)
Q Consensus 204 ~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~----~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~ 279 (368)
+++|+.++|+.|++.|+.++|+|+.....+...+++ +++..+|+.+... .||+++.+..+++++|+.++++
T Consensus 32 ~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~-----~~pk~~~i~~~~~~l~i~~~~~ 106 (320)
T TIGR01686 32 LHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSIN-----WGPKSESLRKIAKKLNLGTDSF 106 (320)
T ss_pred cHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEe-----cCchHHHHHHHHHHhCCCcCcE
Confidence 467889999999999999999999999999999999 8999999988665 5899999999999999999999
Q ss_pred EEEcCCHhhHHHHHHcCCe
Q 043738 280 IVFGNSNQTVEAAHDARMK 298 (368)
Q Consensus 280 l~IGDs~nDl~~A~~aG~~ 298 (368)
+||||+..|+.++++++-.
T Consensus 107 vfidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 107 LFIDDNPAERANVKITLPV 125 (320)
T ss_pred EEECCCHHHHHHHHHHCCC
Confidence 9999999999999997653
No 96
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.27 E-value=4e-11 Score=109.53 Aligned_cols=98 Identities=19% Similarity=0.222 Sum_probs=68.5
Q ss_pred EEEEcCCChHHHHHHHHHcCccccccEEE---eCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCe
Q 043738 222 MALVSTHPRKTLETAIDSIGIEEYFTAIV---AAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMK 298 (368)
Q Consensus 222 vaivSn~~~~~~~~~l~~~gl~~~Fd~iv---~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~ 298 (368)
+++.++.....+...+++++.. +..+. ..+-...+..|...+..+++++|++++++++|||+.||++|++.+|+.
T Consensus 118 ~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~ 195 (230)
T PRK01158 118 VALRRTVPVEEVRELLEELGLD--LEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFG 195 (230)
T ss_pred eeecccccHHHHHHHHHHcCCc--EEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCce
Confidence 3445555555666666666532 22221 123345667789999999999999999999999999999999999998
Q ss_pred EEEEcCCCCccccCCCcEEEcCchh
Q 043738 299 CVAVASKHPVYELGAADLVVRHLDE 323 (368)
Q Consensus 299 ~I~v~~~~~~~~~~~ad~vv~sl~e 323 (368)
+++-+.... -...|++++.+.++
T Consensus 196 vam~Na~~~--vk~~a~~v~~~n~~ 218 (230)
T PRK01158 196 VAVANADEE--LKEAADYVTEKSYG 218 (230)
T ss_pred EEecCccHH--HHHhcceEecCCCc
Confidence 766443322 22358999977654
No 97
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=99.23 E-value=3.1e-10 Score=102.69 Aligned_cols=121 Identities=12% Similarity=0.037 Sum_probs=82.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHCCccccCccHHHHHH-HHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCC-C
Q 043738 177 SRDPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVN-ILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAE-D 254 (368)
Q Consensus 177 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pg~~elL~-~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e-~ 254 (368)
..+...+..+.+.+.+.+.. ...++||+.++|+ .++++|++++|+|+++...++.+.+..++... +.+++.+ +
T Consensus 72 g~~~~~l~~~~~~f~~~~~~----~~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~-~~~i~t~le 146 (210)
T TIGR01545 72 GHREAHLQDLEADFVAAFRD----KVTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR-LNLIASQIE 146 (210)
T ss_pred CCCHHHHHHHHHHHHHHHHH----hCCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc-CcEEEEEeE
Confidence 55667777777777666644 1367999999996 78889999999999999999999988665332 2333332 1
Q ss_pred CCC-CC-----CC-HHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEc
Q 043738 255 VHR-GK-----PD-PEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVA 303 (368)
Q Consensus 255 v~~-~K-----P~-~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~ 303 (368)
+.. ++ .. .+=...+.+.++.+.+.+.+.|||.+|++|...+|-. ++|+
T Consensus 147 ~~~gg~~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~-~~Vn 201 (210)
T TIGR01545 147 RGNGGWVLPLRCLGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHR-WRVS 201 (210)
T ss_pred EeCCceEcCccCCChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCc-EEEC
Confidence 100 10 00 1113334444566777889999999999999999976 4444
No 98
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=99.19 E-value=1.4e-09 Score=93.17 Aligned_cols=102 Identities=9% Similarity=0.104 Sum_probs=87.2
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHc---CccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSI---GIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPER 278 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~---gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~ 278 (368)
..++|++.+.|++-++.|++++|.|.++...++-.+.+. .+..+|+..+.... + .|....-|..++...|++|.+
T Consensus 102 ahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDtti-G-~KrE~~SY~kIa~~iGl~p~e 179 (229)
T COG4229 102 AHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDTTI-G-KKRESQSYAKIAGDIGLPPAE 179 (229)
T ss_pred cccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeeccc-c-ccccchhHHHHHHhcCCCchh
Confidence 488999999999999999999999999888887777654 46667777665532 2 466678899999999999999
Q ss_pred EEEEcCCHhhHHHHHHcCCeEEEEcCC
Q 043738 279 CIVFGNSNQTVEAAHDARMKCVAVASK 305 (368)
Q Consensus 279 ~l~IGDs~nDl~~A~~aG~~~I~v~~~ 305 (368)
++|+.|..+.+.+|..+||.++.+.+.
T Consensus 180 ilFLSDn~~EL~AA~~vGl~t~l~~R~ 206 (229)
T COG4229 180 ILFLSDNPEELKAAAGVGLATGLAVRP 206 (229)
T ss_pred eEEecCCHHHHHHHHhcchheeeeecC
Confidence 999999999999999999999988743
No 99
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=99.16 E-value=1.3e-10 Score=107.91 Aligned_cols=72 Identities=22% Similarity=0.290 Sum_probs=61.0
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCH-hhHHHHHHcCCeEEEEcCCCC-cccc----CCCcEEEcCchhhhHH
Q 043738 256 HRGKPDPEMFVYAAQLLKFIPERCIVFGNSN-QTVEAAHDARMKCVAVASKHP-VYEL----GAADLVVRHLDELSVV 327 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~-nDl~~A~~aG~~~I~v~~~~~-~~~~----~~ad~vv~sl~eL~~~ 327 (368)
..+||.+.+|+.+++.++..+++|++|||+. +||.+|+++||.++.|..+-. ..+. ..++|+++++.++...
T Consensus 187 ~~GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~~~~ 264 (269)
T COG0647 187 VIGKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAELITA 264 (269)
T ss_pred ccCCCCHHHHHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhhccCCcchHhhHHHHHhh
Confidence 5689999999999999999999999999999 899999999999999985443 3322 2378999998888543
No 100
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.15 E-value=1.9e-11 Score=111.27 Aligned_cols=100 Identities=12% Similarity=0.067 Sum_probs=69.1
Q ss_pred EEEEcCCChHHHHHHHHHcCccccc-cEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEE
Q 043738 222 MALVSTHPRKTLETAIDSIGIEEYF-TAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCV 300 (368)
Q Consensus 222 vaivSn~~~~~~~~~l~~~gl~~~F-d~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I 300 (368)
..+.+......+...++.++....+ ......+....+..|...+..+++++|++++++++|||+.||++|++.+|+.++
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~va 189 (225)
T TIGR01482 110 VKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFGVA 189 (225)
T ss_pred EEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCceEE
Confidence 3444444556667777777653111 001122334567788999999999999999999999999999999999999876
Q ss_pred EEcCCCCccccCCCcEEEcCchh
Q 043738 301 AVASKHPVYELGAADLVVRHLDE 323 (368)
Q Consensus 301 ~v~~~~~~~~~~~ad~vv~sl~e 323 (368)
+-+... .-...|++|+.+..+
T Consensus 190 m~Na~~--~~k~~A~~vt~~~~~ 210 (225)
T TIGR01482 190 VANAQP--ELKEWADYVTESPYG 210 (225)
T ss_pred cCChhH--HHHHhcCeecCCCCC
Confidence 644322 222348999876554
No 101
>PTZ00445 p36-lilke protein; Provisional
Probab=99.14 E-value=3e-10 Score=100.64 Aligned_cols=103 Identities=12% Similarity=0.133 Sum_probs=84.1
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChH---------------HHHHHHHHcCccccccEEEeCC-----------CCC
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRK---------------TLETAIDSIGIEEYFTAIVAAE-----------DVH 256 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~---------------~~~~~l~~~gl~~~Fd~iv~~e-----------~v~ 256 (368)
.+.|.+..++..|++.|++++|||-++.. +++..+++.+...-...+++-. .++
T Consensus 75 ~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~g 154 (219)
T PTZ00445 75 SVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLG 154 (219)
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhc
Confidence 45677888999999999999999987653 4667777665554444555422 146
Q ss_pred CCCCCHHH--H--HHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCC
Q 043738 257 RGKPDPEM--F--VYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASK 305 (368)
Q Consensus 257 ~~KP~~~~--~--~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~ 305 (368)
..||++.+ | +++++++|+.|++|+||+|...++++|+++|+.++.+.+.
T Consensus 155 l~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~~ 207 (219)
T PTZ00445 155 LDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTGN 207 (219)
T ss_pred ccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCCh
Confidence 78999999 8 9999999999999999999999999999999999998754
No 102
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=99.11 E-value=3.9e-10 Score=99.70 Aligned_cols=86 Identities=19% Similarity=0.289 Sum_probs=64.2
Q ss_pred ccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccc--cEEEeCCC-------CC---CCCCCHHHHHHH---HH
Q 043738 206 TGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYF--TAIVAAED-------VH---RGKPDPEMFVYA---AQ 270 (368)
Q Consensus 206 pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~F--d~iv~~e~-------v~---~~KP~~~~~~~~---le 270 (368)
+++.++|+.+++.|++++|+|+++...++..++.+|+...+ ..-+..+. +. .+ -|...++.+ ..
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~K~~~l~~~~~~~~ 170 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDNGGGIFTGRITGSNCG-GKAEALKELYIRDE 170 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECTTCCEEEEEEEEEEES-HHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeecccceeeeeECCCCCC-cHHHHHHHHHHHhh
Confidence 55559999999999999999999999999999999987532 21111000 00 01 146677777 44
Q ss_pred HcCCCCCcEEEEcCCHhhHHHHH
Q 043738 271 LLKFIPERCIVFGNSNQTVEAAH 293 (368)
Q Consensus 271 ~lgi~p~~~l~IGDs~nDl~~A~ 293 (368)
. +.....+++||||.+|+.|++
T Consensus 171 ~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 171 E-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp H-THTCCEEEEEESSGGGHHHHH
T ss_pred c-CCCCCeEEEEECCHHHHHHhC
Confidence 5 888999999999999999985
No 103
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.11 E-value=5.4e-11 Score=107.80 Aligned_cols=99 Identities=14% Similarity=0.127 Sum_probs=69.3
Q ss_pred cEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEE
Q 043738 221 PMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCV 300 (368)
Q Consensus 221 ~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I 300 (368)
.+++++......+...++..++..++.. ..-+-...+..|..+++.+++++|++++++++|||+.||++|++.+|+.++
T Consensus 109 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~va 187 (215)
T TIGR01487 109 LVIMREGKDVDEVREIIKERGLNLVDSG-FAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVA 187 (215)
T ss_pred EEEecCCccHHHHHHHHHhCCeEEEecC-ceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEE
Confidence 3445566556666777777666543221 111223455667889999999999999999999999999999999999877
Q ss_pred EEcCCCCccccCCCcEEEcCch
Q 043738 301 AVASKHPVYELGAADLVVRHLD 322 (368)
Q Consensus 301 ~v~~~~~~~~~~~ad~vv~sl~ 322 (368)
+-++... -...|++++++.+
T Consensus 188 m~na~~~--~k~~A~~v~~~~~ 207 (215)
T TIGR01487 188 VANADDQ--LKEIADYVTSNPY 207 (215)
T ss_pred cCCccHH--HHHhCCEEcCCCC
Confidence 7543222 2224899987654
No 104
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=99.09 E-value=2.6e-10 Score=105.02 Aligned_cols=49 Identities=29% Similarity=0.478 Sum_probs=45.5
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcE-EEEcCCH-hhHHHHHHcCCeEEEEcC
Q 043738 256 HRGKPDPEMFVYAAQLLKFIPERC-IVFGNSN-QTVEAAHDARMKCVAVAS 304 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~lgi~p~~~-l~IGDs~-nDl~~A~~aG~~~I~v~~ 304 (368)
..+||++.+|..++++++++++++ ++|||+. +|+.+|+++|+++++|.+
T Consensus 185 ~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~ 235 (236)
T TIGR01460 185 VVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLT 235 (236)
T ss_pred eecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEec
Confidence 467999999999999999998887 9999998 899999999999999864
No 105
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.06 E-value=1.4e-09 Score=101.76 Aligned_cols=68 Identities=13% Similarity=0.070 Sum_probs=54.9
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchh
Q 043738 254 DVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDE 323 (368)
Q Consensus 254 ~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~e 323 (368)
-...+-.|..+++.+++++|++++++++|||+.||++|.+.+|.++++-++.. .-...|++|+.+.++
T Consensus 190 I~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~--~vK~~A~~vt~~n~~ 257 (270)
T PRK10513 190 ILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIP--SVKEVAQFVTKSNLE 257 (270)
T ss_pred EeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccH--HHHHhcCeeccCCCc
Confidence 34566777999999999999999999999999999999999999877744332 223359999977653
No 106
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=99.06 E-value=4.7e-10 Score=97.39 Aligned_cols=102 Identities=17% Similarity=0.232 Sum_probs=74.6
Q ss_pred ccccCccHHHHHHHHHhCCCcEEEEcC-CChHHHHHHHHHcCcc----------ccccEEEeCCCCCCCCCCHHHHHHHH
Q 043738 201 IYRLRTGSKEFVNILMHYKIPMALVST-HPRKTLETAIDSIGIE----------EYFTAIVAAEDVHRGKPDPEMFVYAA 269 (368)
Q Consensus 201 ~~~~~pg~~elL~~Lk~~Gi~vaivSn-~~~~~~~~~l~~~gl~----------~~Fd~iv~~e~v~~~KP~~~~~~~~l 269 (368)
.+.++|++.++|+.|+.+|+++++.|- .....++.+|+.+++. ++|+..-... + .|...|+.+.
T Consensus 43 ~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~----g-sK~~Hf~~i~ 117 (169)
T PF12689_consen 43 EVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYLEIYP----G-SKTTHFRRIH 117 (169)
T ss_dssp EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEEEESS----S--HHHHHHHHH
T ss_pred EEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchhheec----C-chHHHHHHHH
Confidence 479999999999999999999999995 4567899999999999 7887643222 2 5689999999
Q ss_pred HHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCC
Q 043738 270 QLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHP 307 (368)
Q Consensus 270 e~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~ 307 (368)
++.|+++++++||+|...+++...+.|+.+|.+..|-.
T Consensus 118 ~~tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~Glt 155 (169)
T PF12689_consen 118 RKTGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDGLT 155 (169)
T ss_dssp HHH---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS--
T ss_pred HhcCCChhHEEEecCchhcceeeEecCcEEEEeCCCCC
Confidence 99999999999999999999999999999999987543
No 107
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=99.05 E-value=5e-09 Score=100.89 Aligned_cols=73 Identities=14% Similarity=0.080 Sum_probs=58.5
Q ss_pred CCCCCCHHHHHHHHHHc--------CC-----CCCcEEEEcCCH-hhHHHHHHcCCeEEEEcCC-CCcccc---CCCcEE
Q 043738 256 HRGKPDPEMFVYAAQLL--------KF-----IPERCIVFGNSN-QTVEAAHDARMKCVAVASK-HPVYEL---GAADLV 317 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~l--------gi-----~p~~~l~IGDs~-nDl~~A~~aG~~~I~v~~~-~~~~~~---~~ad~v 317 (368)
..+||++.+|..+++.+ ++ ++++++||||+. +|+.+|+++||.+|+|..+ ....+. ..++++
T Consensus 230 ~~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~~~~~p~~v 309 (321)
T TIGR01456 230 TLGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDLKECKPTLI 309 (321)
T ss_pred EcCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCCCCCCCCEE
Confidence 35999999999998887 43 457999999999 9999999999999999854 222221 238999
Q ss_pred EcCchhhhHHH
Q 043738 318 VRHLDELSVVD 328 (368)
Q Consensus 318 v~sl~eL~~~~ 328 (368)
++++.|+...+
T Consensus 310 v~~l~e~~~~i 320 (321)
T TIGR01456 310 VNDVFDAVTKI 320 (321)
T ss_pred ECCHHHHHHHh
Confidence 99999986544
No 108
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.05 E-value=9.5e-10 Score=103.42 Aligned_cols=90 Identities=14% Similarity=0.256 Sum_probs=61.1
Q ss_pred HHHhCCCcEEEE---cCCChHHHHHHHHHcCcc----ccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCC-CcEEEEcCC
Q 043738 214 ILMHYKIPMALV---STHPRKTLETAIDSIGIE----EYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIP-ERCIVFGNS 285 (368)
Q Consensus 214 ~Lk~~Gi~vaiv---Sn~~~~~~~~~l~~~gl~----~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p-~~~l~IGDs 285 (368)
.++..++...++ +......+...++..++. .+|..+ +..+ .|...+.++++.+|+++ +++++|||+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei-----~~~~-~Kg~al~~l~~~~~i~~~~~v~~~GDs 216 (273)
T PRK00192 143 LAKDREFSEPFLWNGSEAAKERFEEALKRLGLKVTRGGRFLHL-----LGGG-DKGKAVRWLKELYRRQDGVETIALGDS 216 (273)
T ss_pred HHHhcccCCceeecCchHHHHHHHHHHHHcCCEEEECCeEEEE-----eCCC-CHHHHHHHHHHHHhccCCceEEEEcCC
Confidence 344445554444 333333444555555543 222222 3334 56789999999999999 999999999
Q ss_pred HhhHHHHHHcCCeEEEEcCCCCcc
Q 043738 286 NQTVEAAHDARMKCVAVASKHPVY 309 (368)
Q Consensus 286 ~nDl~~A~~aG~~~I~v~~~~~~~ 309 (368)
.||++|++.+|+.++|-++.....
T Consensus 217 ~NDi~m~~~ag~~vam~NA~~~~k 240 (273)
T PRK00192 217 PNDLPMLEAADIAVVVPGPDGPNP 240 (273)
T ss_pred hhhHHHHHhCCeeEEeCCCCCCCc
Confidence 999999999999988877554443
No 109
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.04 E-value=1.9e-10 Score=108.01 Aligned_cols=79 Identities=14% Similarity=0.122 Sum_probs=57.6
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcE--EEcCch-hhhHHHHh
Q 043738 254 DVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADL--VVRHLD-ELSVVDLK 330 (368)
Q Consensus 254 ~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~--vv~sl~-eL~~~~l~ 330 (368)
-...+-.|..+++.+++++|++++++++|||+.||++|.+.+|.++++-++..... ..|++ ++.+.+ +-....++
T Consensus 182 I~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK--~~A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 182 VLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLR--AELPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred eecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHH--HhCCCCeecCCCcchHHHHHHH
Confidence 34566677999999999999999999999999999999999998777644332222 23664 665544 34444566
Q ss_pred cccc
Q 043738 331 NLAD 334 (368)
Q Consensus 331 ~L~d 334 (368)
++..
T Consensus 260 ~~~~ 263 (272)
T PRK15126 260 HWLD 263 (272)
T ss_pred HHhc
Confidence 6553
No 110
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.04 E-value=2.4e-09 Score=94.53 Aligned_cols=106 Identities=12% Similarity=0.101 Sum_probs=77.0
Q ss_pred cccCccHHHHHHHHHhCCC-cEEEEcCCChHHHHHHHHHcCccccccEEEeCCC----CC-----------------CCC
Q 043738 202 YRLRTGSKEFVNILMHYKI-PMALVSTHPRKTLETAIDSIGIEEYFTAIVAAED----VH-----------------RGK 259 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi-~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~----v~-----------------~~K 259 (368)
++..||+.++++.+++.|. .+.|+|.+...+++.+++++|+.++|+.|++--. -+ ..-
T Consensus 83 iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsNm 162 (256)
T KOG3120|consen 83 IPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSNM 162 (256)
T ss_pred CCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCchhh
Confidence 6899999999999999985 9999999999999999999999999987766310 00 001
Q ss_pred CCHHHHHHHH---HHcCCCCCcEEEEcCCHhhHHHHHHc-CCeEEEEcCCCC
Q 043738 260 PDPEMFVYAA---QLLKFIPERCIVFGNSNQTVEAAHDA-RMKCVAVASKHP 307 (368)
Q Consensus 260 P~~~~~~~~l---e~lgi~p~~~l~IGDs~nDl~~A~~a-G~~~I~v~~~~~ 307 (368)
-|..++..+. -+-|+..++.+||||+.||+-..... +..+++...+.+
T Consensus 163 CKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfp 214 (256)
T KOG3120|consen 163 CKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFP 214 (256)
T ss_pred hhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCc
Confidence 1222333322 23478889999999999997655554 555555554443
No 111
>PRK10976 putative hydrolase; Provisional
Probab=99.00 E-value=9e-10 Score=102.96 Aligned_cols=67 Identities=16% Similarity=0.249 Sum_probs=53.2
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCc--EEEcCchh
Q 043738 255 VHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAAD--LVVRHLDE 323 (368)
Q Consensus 255 v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad--~vv~sl~e 323 (368)
...+-.|..+++.+++++|++++++++|||+.||++|.+.+|.+++|-++.....+ .|+ +++.+.+|
T Consensus 185 ~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~--~A~~~~v~~~n~e 253 (266)
T PRK10976 185 MAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKD--LLPELEVIGSNAD 253 (266)
T ss_pred EcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHH--hCCCCeecccCch
Confidence 45566679999999999999999999999999999999999998777544433333 355 77776554
No 112
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.99 E-value=3.2e-10 Score=104.79 Aligned_cols=98 Identities=21% Similarity=0.273 Sum_probs=83.3
Q ss_pred CccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEE--EeCCCCCCCCCCHHHHHHHHHHcCCC-CCcEEE
Q 043738 205 RTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAI--VAAEDVHRGKPDPEMFVYAAQLLKFI-PERCIV 281 (368)
Q Consensus 205 ~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~i--v~~e~v~~~KP~~~~~~~~le~lgi~-p~~~l~ 281 (368)
++++.++++.+.++|+++ ++||.+.......+..++...+|..+ ++.+....+||++.+|..++++++.. +++|++
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~~ 218 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRMLM 218 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccEEE
Confidence 578899999998889997 88998877776666777777777754 56666668999999999999999975 679999
Q ss_pred EcCC-HhhHHHHHHcCCeEEEEc
Q 043738 282 FGNS-NQTVEAAHDARMKCVAVA 303 (368)
Q Consensus 282 IGDs-~nDl~~A~~aG~~~I~v~ 303 (368)
|||+ .+|+.+|+++|+.+++|.
T Consensus 219 vGD~~~~Di~~a~~~G~~~i~v~ 241 (242)
T TIGR01459 219 VGDSFYTDILGANRLGIDTALVL 241 (242)
T ss_pred ECCCcHHHHHHHHHCCCeEEEEe
Confidence 9999 599999999999999975
No 113
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.98 E-value=1.4e-09 Score=100.57 Aligned_cols=90 Identities=14% Similarity=0.266 Sum_probs=75.6
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHH--HHHHHcCccc-cccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLE--TAIDSIGIEE-YFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERC 279 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~--~~l~~~gl~~-~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~ 279 (368)
.++||+.++|+.|+++|++++++||..+.... ..++++|+.. +|+.|+++.++.. ..+..+++++++.++++
T Consensus 24 ~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~~-----~~l~~~~~~~~~~~~~~ 98 (242)
T TIGR01459 24 HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEIAV-----QMILESKKRFDIRNGII 98 (242)
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHHHH-----HHHHhhhhhccCCCceE
Confidence 45689999999999999999999998877665 7889999997 9999999876432 46777778889999999
Q ss_pred EEEcCCHhhHHHHHHcCC
Q 043738 280 IVFGNSNQTVEAAHDARM 297 (368)
Q Consensus 280 l~IGDs~nDl~~A~~aG~ 297 (368)
++|||+..|++.....|.
T Consensus 99 ~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 99 YLLGHLENDIINLMQCYT 116 (242)
T ss_pred EEeCCcccchhhhcCCCc
Confidence 999999988887766554
No 114
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.98 E-value=4.2e-10 Score=105.12 Aligned_cols=67 Identities=24% Similarity=0.207 Sum_probs=53.4
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchh
Q 043738 255 VHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDE 323 (368)
Q Consensus 255 v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~e 323 (368)
...+.-|..+++.+++++|++++++++|||+.||++|.+.+|.+++|-+.. ......|++++.+.++
T Consensus 184 ~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~--~~~k~~A~~vt~~n~~ 250 (264)
T COG0561 184 TPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNAD--EELKELADYVTTSNDE 250 (264)
T ss_pred ecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCC--HHHHhhCCcccCCccc
Confidence 456777899999999999999999999999999999999999987775442 2222347777666554
No 115
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=98.93 E-value=2.2e-08 Score=93.32 Aligned_cols=84 Identities=12% Similarity=0.170 Sum_probs=67.2
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChH---HHHHHHHHcCcccc-ccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRK---TLETAIDSIGIEEY-FTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPE 277 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~---~~~~~l~~~gl~~~-Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~ 277 (368)
..++||+.++|+.++++|++++++||.... .+...++++|+..+ ++.++..++ .++++..+..+.+.+++
T Consensus 117 a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~---~~~K~~rr~~I~~~y~I--- 190 (266)
T TIGR01533 117 AKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKD---KSSKESRRQKVQKDYEI--- 190 (266)
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCC---CCCcHHHHHHHHhcCCE---
Confidence 578999999999999999999999998744 44577888999764 466666643 35667888888887766
Q ss_pred cEEEEcCCHhhHHHH
Q 043738 278 RCIVFGNSNQTVEAA 292 (368)
Q Consensus 278 ~~l~IGDs~nDl~~A 292 (368)
+++|||..+|+..+
T Consensus 191 -vl~vGD~~~Df~~~ 204 (266)
T TIGR01533 191 -VLLFGDNLLDFDDF 204 (266)
T ss_pred -EEEECCCHHHhhhh
Confidence 89999999999654
No 116
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.89 E-value=2.9e-09 Score=100.05 Aligned_cols=70 Identities=4% Similarity=-0.072 Sum_probs=54.0
Q ss_pred CCCCCCCCCHHHHHHHHHHcCC---CCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCcc----ccCCCcEEEcCch
Q 043738 253 EDVHRGKPDPEMFVYAAQLLKF---IPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVY----ELGAADLVVRHLD 322 (368)
Q Consensus 253 e~v~~~KP~~~~~~~~le~lgi---~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~----~~~~ad~vv~sl~ 322 (368)
|-...+-.|..+++.+++++|+ +++++++|||+.||++|.+.+|.+++|-+...... ....+++++....
T Consensus 180 Ei~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~ 256 (271)
T PRK03669 180 HVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREG 256 (271)
T ss_pred EEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCC
Confidence 3345677789999999999999 99999999999999999999998877754332211 1224778876655
No 117
>PLN02887 hydrolase family protein
Probab=98.88 E-value=1e-08 Score=105.25 Aligned_cols=68 Identities=16% Similarity=0.170 Sum_probs=55.2
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchh
Q 043738 254 DVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDE 323 (368)
Q Consensus 254 ~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~e 323 (368)
-+..+-.|..+++.+++++|++++++++|||+.||++|.+.+|.+++|-++... -...||+|+.+.++
T Consensus 501 I~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~ee--VK~~Ad~VT~sNdE 568 (580)
T PLN02887 501 IVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEK--TKAVADVIGVSNDE 568 (580)
T ss_pred EecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHH--HHHhCCEEeCCCCc
Confidence 345667779999999999999999999999999999999999998777443332 22359999977654
No 118
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.83 E-value=6.4e-08 Score=89.97 Aligned_cols=67 Identities=19% Similarity=0.159 Sum_probs=53.9
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchh
Q 043738 255 VHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDE 323 (368)
Q Consensus 255 v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~e 323 (368)
...+-.|..+++.+++.+|++++++++|||+.||++|++.+|+.+++-+. .......|++++.+.++
T Consensus 183 ~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na--~~~~k~~a~~~~~~n~~ 249 (256)
T TIGR00099 183 TAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNA--DEELKALADYVTDSNNE 249 (256)
T ss_pred cCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCc--hHHHHHhCCEEecCCCC
Confidence 45566789999999999999999999999999999999999998777432 22223348999887654
No 119
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.82 E-value=3e-08 Score=90.64 Aligned_cols=65 Identities=22% Similarity=0.277 Sum_probs=52.9
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchh
Q 043738 257 RGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDE 323 (368)
Q Consensus 257 ~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~e 323 (368)
.+--|..+++.+++++|++++++++|||+.||++|.+.+|..+++ +.....-...|++++.+.++
T Consensus 183 ~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am--~na~~~~k~~a~~i~~~~~~ 247 (254)
T PF08282_consen 183 KGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAM--GNATPELKKAADYITPSNND 247 (254)
T ss_dssp TTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEE--TTS-HHHHHHSSEEESSGTC
T ss_pred CCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEE--cCCCHHHHHhCCEEecCCCC
Confidence 455668999999999999999999999999999999999988666 33322333349999988887
No 120
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=98.81 E-value=1.7e-08 Score=104.22 Aligned_cols=114 Identities=18% Similarity=0.208 Sum_probs=86.7
Q ss_pred cccCccHHHHHHHHHhCC-CcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 043738 202 YRLRTGSKEFVNILMHYK-IPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCI 280 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~G-i~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l 280 (368)
..++||+.++|+.|+++| ++++++||.+...+...++++|+..+|..+. +++|. .++++++..+.+|+
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~~~~-------p~~K~----~~v~~l~~~~~~v~ 451 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHAELL-------PEDKL----AIVKELQEEGGVVA 451 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeeccCC-------HHHHH----HHHHHHHHcCCEEE
Confidence 478999999999999999 9999999999999999999999987776531 12223 34455555678999
Q ss_pred EEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEc--CchhhhHHH
Q 043738 281 VFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVR--HLDELSVVD 328 (368)
Q Consensus 281 ~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~--sl~eL~~~~ 328 (368)
||||+.||+.+++++|+.+.+ +.........||+++. ++..+...+
T Consensus 452 ~vGDg~nD~~al~~A~vgia~--g~~~~~~~~~Ad~vi~~~~~~~l~~~i 499 (556)
T TIGR01525 452 MVGDGINDAPALAAADVGIAM--GAGSDVAIEAADIVLLNDDLSSLPTAI 499 (556)
T ss_pred EEECChhHHHHHhhCCEeEEe--CCCCHHHHHhCCEEEeCCCHHHHHHHH
Confidence 999999999999999965444 2222222235999997 566765543
No 121
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=98.81 E-value=3.9e-08 Score=85.15 Aligned_cols=86 Identities=20% Similarity=0.213 Sum_probs=62.8
Q ss_pred HHHHHHHhCCC--cEEEEcCCC-------hHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCC-----C
Q 043738 210 EFVNILMHYKI--PMALVSTHP-------RKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKF-----I 275 (368)
Q Consensus 210 elL~~Lk~~Gi--~vaivSn~~-------~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi-----~ 275 (368)
+.+++|++.+. .++|+||+. ...++..-+.+|+. .+... ..|| ..+..++++++. .
T Consensus 66 ~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp----vl~h~----~kKP--~~~~~i~~~~~~~~~~~~ 135 (168)
T PF09419_consen 66 EWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP----VLRHR----AKKP--GCFREILKYFKCQKVVTS 135 (168)
T ss_pred HHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc----EEEeC----CCCC--ccHHHHHHHHhhccCCCC
Confidence 44555555544 599999983 55666777778854 21111 3455 667777777764 4
Q ss_pred CCcEEEEcCCH-hhHHHHHHcCCeEEEEcCC
Q 043738 276 PERCIVFGNSN-QTVEAAHDARMKCVAVASK 305 (368)
Q Consensus 276 p~~~l~IGDs~-nDl~~A~~aG~~~I~v~~~ 305 (368)
|+++++|||.. .|+-+|+..|+.+|++..+
T Consensus 136 p~eiavIGDrl~TDVl~gN~~G~~tilv~~g 166 (168)
T PF09419_consen 136 PSEIAVIGDRLFTDVLMGNRMGSYTILVTDG 166 (168)
T ss_pred chhEEEEcchHHHHHHHhhccCceEEEEecC
Confidence 99999999999 8999999999999998754
No 122
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=98.79 E-value=2.1e-08 Score=103.16 Aligned_cols=115 Identities=16% Similarity=0.178 Sum_probs=88.9
Q ss_pred cccCccHHHHHHHHHhCCC-cEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 043738 202 YRLRTGSKEFVNILMHYKI-PMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCI 280 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi-~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l 280 (368)
..++||+.++++.|+++|+ +++++||.+...++..++++|+..+|..+. +.++ ..++++++...++++
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~~-------p~~K----~~~i~~l~~~~~~v~ 429 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAELL-------PEDK----LEIVKELREKYGPVA 429 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhhccC-------cHHH----HHHHHHHHhcCCEEE
Confidence 4788999999999999999 999999999999999999999988876432 1222 345555555668999
Q ss_pred EEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEE--cCchhhhHHH
Q 043738 281 VFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV--RHLDELSVVD 328 (368)
Q Consensus 281 ~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv--~sl~eL~~~~ 328 (368)
||||+.||+.+++++|+.+.+ ...........||+++ +++.++...+
T Consensus 430 ~vGDg~nD~~al~~A~vgia~-g~~~~~~~~~~ad~vl~~~~l~~l~~~i 478 (536)
T TIGR01512 430 MVGDGINDAPALAAADVGIAM-GASGSDVAIETADVVLLNDDLSRLPQAI 478 (536)
T ss_pred EEeCCHHHHHHHHhCCEEEEe-CCCccHHHHHhCCEEEECCCHHHHHHHH
Confidence 999999999999999964433 1112222334599999 8999986543
No 123
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=98.79 E-value=2.8e-07 Score=88.80 Aligned_cols=103 Identities=13% Similarity=0.155 Sum_probs=85.3
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHc-C-------ccccccEEEeCCCC-----------------C
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSI-G-------IEEYFTAIVAAEDV-----------------H 256 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~-g-------l~~~Fd~iv~~e~v-----------------~ 256 (368)
+...||+.++|+.|+++|++++|+||+....++..++.+ | +.++||.|+++..- +
T Consensus 183 v~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~~g 262 (343)
T TIGR02244 183 VLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVETG 262 (343)
T ss_pred hccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCCCC
Confidence 566899999999999999999999999999999999996 7 89999999886420 1
Q ss_pred CCCCCH------------HHHHHHHHHcCCCCCcEEEEcCCH-hhHHHHH-HcCCeEEEEcC
Q 043738 257 RGKPDP------------EMFVYAAQLLKFIPERCIVFGNSN-QTVEAAH-DARMKCVAVAS 304 (368)
Q Consensus 257 ~~KP~~------------~~~~~~le~lgi~p~~~l~IGDs~-nDl~~A~-~aG~~~I~v~~ 304 (368)
..++.. --...+.+.+|+.++++++|||+. .|+..++ .+||.+|+|..
T Consensus 263 ~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~p 324 (343)
T TIGR02244 263 SLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIP 324 (343)
T ss_pred cccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEch
Confidence 011111 125578888999999999999999 8999998 89999999764
No 124
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.78 E-value=1.2e-07 Score=86.17 Aligned_cols=69 Identities=7% Similarity=0.130 Sum_probs=49.9
Q ss_pred CCChHHHHHHHHHcCcc----ccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEE
Q 043738 227 THPRKTLETAIDSIGIE----EYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCV 300 (368)
Q Consensus 227 n~~~~~~~~~l~~~gl~----~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I 300 (368)
+.....+...+...++. .+|..+. +.+-.|...+..+++++|+++++|++|||+.||++|++.+|.+++
T Consensus 147 ~~~~~~~~~~l~~~~~~~~~~~~~~ei~-----~~~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va 219 (221)
T TIGR02463 147 DSRMPRFTALLADLGLAIVQGNRFSHVL-----GASSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVV 219 (221)
T ss_pred hhHHHHHHHHHHHcCCeEEecCCeeEEe-----cCCCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEE
Confidence 33344455566665554 2333332 233346778999999999999999999999999999999998754
No 125
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=98.78 E-value=1.1e-07 Score=81.80 Aligned_cols=125 Identities=19% Similarity=0.128 Sum_probs=80.9
Q ss_pred ccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccc-------ccc----------EEEeCCCCCCCCCCHH
Q 043738 201 IYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEE-------YFT----------AIVAAEDVHRGKPDPE 263 (368)
Q Consensus 201 ~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~-------~Fd----------~iv~~e~v~~~KP~~~ 263 (368)
.+.+.||.+++++++++++++++++|++....+..+++.++-.+ +++ .++..++...+--++.
T Consensus 71 ~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~~ 150 (220)
T COG4359 71 DIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKSS 150 (220)
T ss_pred hcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCcch
Confidence 36899999999999999999999999999999999999875221 111 1222223333333344
Q ss_pred HHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCC--CCccccCCCcEEEcCchhhhHHHHhc
Q 043738 264 MFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASK--HPVYELGAADLVVRHLDELSVVDLKN 331 (368)
Q Consensus 264 ~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~--~~~~~~~~ad~vv~sl~eL~~~~l~~ 331 (368)
.+. .+.-+++.+++.|||..|+.+|+...+- +.... +...+....-+-..++.|+...+-+-
T Consensus 151 vI~----~l~e~~e~~fy~GDsvsDlsaaklsDll--FAK~~L~nyc~eqn~~f~~fe~F~eIlk~iekv 214 (220)
T COG4359 151 VIH----ELSEPNESIFYCGDSVSDLSAAKLSDLL--FAKDDLLNYCREQNLNFLEFETFYEILKEIEKV 214 (220)
T ss_pred hHH----HhhcCCceEEEecCCcccccHhhhhhhH--hhHHHHHHHHHHcCCCCcccccHHHHHHHHHHH
Confidence 444 4444567799999999999999998752 21110 01111122334456777776555443
No 126
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=98.76 E-value=1.9e-08 Score=86.94 Aligned_cols=96 Identities=18% Similarity=0.264 Sum_probs=68.5
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCC---h-----------HHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHH
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHP---R-----------KTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYA 268 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~---~-----------~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~ 268 (368)
.+.+++.+.|+.+.+.|+.++|+||.. . ..+..+++.+++. +...++...-...||.+-++..+
T Consensus 29 ~~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip--~~~~~a~~~d~~RKP~~GM~~~~ 106 (159)
T PF08645_consen 29 FFPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIP--IQVYAAPHKDPCRKPNPGMWEFA 106 (159)
T ss_dssp EC-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS---EEEEECGCSSTTSTTSSHHHHHH
T ss_pred hcchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCc--eEEEecCCCCCCCCCchhHHHHH
Confidence 345689999999999999999999951 1 2334555666665 33333334447899999999999
Q ss_pred HHHcCC----CCCcEEEEcCC-----------HhhHHHHHHcCCeEE
Q 043738 269 AQLLKF----IPERCIVFGNS-----------NQTVEAAHDARMKCV 300 (368)
Q Consensus 269 le~lgi----~p~~~l~IGDs-----------~nDl~~A~~aG~~~I 300 (368)
++.++. +.++++||||. ..|.+=|.++|++..
T Consensus 107 ~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f~ 153 (159)
T PF08645_consen 107 LKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKFY 153 (159)
T ss_dssp CCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--EE
T ss_pred HHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCccc
Confidence 999874 89999999996 678999999998743
No 127
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.76 E-value=2.8e-08 Score=92.75 Aligned_cols=60 Identities=12% Similarity=0.118 Sum_probs=55.7
Q ss_pred ccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHH
Q 043738 206 TGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMF 265 (368)
Q Consensus 206 pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~ 265 (368)
||+.++|+.|+++|++++|+|++.+..+...++++|+..+|+.++++++....||+++..
T Consensus 149 PgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~~kp~~e~~ 208 (301)
T TIGR01684 149 PRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAEEYSTMSTE 208 (301)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccccCCCCcccc
Confidence 788899999999999999999999999999999999999999999999998888887544
No 128
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=98.72 E-value=4e-08 Score=91.09 Aligned_cols=71 Identities=21% Similarity=0.320 Sum_probs=56.7
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCH-hhHHHHHHcCCeEEEEcCC-CCcccc--------CCCcEEEcCchhh
Q 043738 255 VHRGKPDPEMFVYAAQLLKFIPERCIVFGNSN-QTVEAAHDARMKCVAVASK-HPVYEL--------GAADLVVRHLDEL 324 (368)
Q Consensus 255 v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~-nDl~~A~~aG~~~I~v~~~-~~~~~~--------~~ad~vv~sl~eL 324 (368)
.-.+||.+.++..+.++++++|++|+||||+. .||.-+++.|++++++..+ +..++. ..+||-++++.++
T Consensus 220 ~v~GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~~~~~~~~PDyy~~~l~d~ 299 (306)
T KOG2882|consen 220 IVLGKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEAQGDNKMVPDYYADSLGDL 299 (306)
T ss_pred eecCCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHhcccccCCCCchHHhhHHHH
Confidence 34689999999999999999999999999999 6999999999999998844 322221 1266666666665
Q ss_pred h
Q 043738 325 S 325 (368)
Q Consensus 325 ~ 325 (368)
.
T Consensus 300 ~ 300 (306)
T KOG2882|consen 300 L 300 (306)
T ss_pred h
Confidence 4
No 129
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.71 E-value=1.5e-08 Score=93.06 Aligned_cols=49 Identities=14% Similarity=0.112 Sum_probs=44.5
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEE
Q 043738 253 EDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVA 301 (368)
Q Consensus 253 e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~ 301 (368)
+....+.+|..+++.+++++|++++++++|||+.||++|++.+|..+++
T Consensus 152 ei~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav 200 (236)
T TIGR02471 152 DVLPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVV 200 (236)
T ss_pred EEeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEE
Confidence 4456788999999999999999999999999999999999999987765
No 130
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=98.69 E-value=6.9e-08 Score=99.78 Aligned_cols=113 Identities=19% Similarity=0.218 Sum_probs=83.9
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
..++||+.++++.|++.|++++++|+.....++..++++|++ +| ++. .+++|.+. +++++..+++|+|
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-~~-----~~~--~p~~K~~~----v~~l~~~~~~v~~ 471 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-VR-----AEV--LPDDKAAL----IKELQEKGRVVAM 471 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-EE-----ccC--ChHHHHHH----HHHHHHcCCEEEE
Confidence 378899999999999999999999999999999999999995 22 221 12333444 4444446789999
Q ss_pred EcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEE--cCchhhhHHH
Q 043738 282 FGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV--RHLDELSVVD 328 (368)
Q Consensus 282 IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv--~sl~eL~~~~ 328 (368)
|||+.||+.+++++|+.+.+ . .........||+++ +++.++...+
T Consensus 472 VGDg~nD~~al~~A~vgia~-g-~g~~~a~~~Advvl~~~~l~~l~~~i 518 (562)
T TIGR01511 472 VGDGINDAPALAQADVGIAI-G-AGTDVAIEAADVVLMRNDLNDVATAI 518 (562)
T ss_pred EeCCCccHHHHhhCCEEEEe-C-CcCHHHHhhCCEEEeCCCHHHHHHHH
Confidence 99999999999999975433 2 22222234589999 4777776544
No 131
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.66 E-value=1e-07 Score=88.44 Aligned_cols=53 Identities=21% Similarity=0.325 Sum_probs=45.2
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCC
Q 043738 253 EDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASK 305 (368)
Q Consensus 253 e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~ 305 (368)
+....+.+|..+++.+++++|+++++|++|||+.||++|++.+|..++++...
T Consensus 160 di~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na 212 (249)
T TIGR01485 160 DILPQGSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNA 212 (249)
T ss_pred EEEeCCCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCC
Confidence 34567889999999999999999999999999999999999966555665543
No 132
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=98.65 E-value=1.5e-08 Score=87.83 Aligned_cols=99 Identities=11% Similarity=0.104 Sum_probs=87.2
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccc-cccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEE-YFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCI 280 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~-~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l 280 (368)
+...||+.+||+.|.+. +.++|.|++...+++.++++++... +|+.+++.+.....+++ +...++.+|.++++||
T Consensus 41 v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~~~~~---~~K~L~~l~~~~~~vI 116 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVFTNGK---YVKDLSLVGKDLSKVI 116 (162)
T ss_pred EEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEEeCCC---EEeEchhcCCChhhEE
Confidence 57899999999999988 9999999999999999999999775 89999998876555655 6777888999999999
Q ss_pred EEcCCHhhHHHHHHcCCeEEEEcC
Q 043738 281 VFGNSNQTVEAAHDARMKCVAVAS 304 (368)
Q Consensus 281 ~IGDs~nDl~~A~~aG~~~I~v~~ 304 (368)
+|||+..++.++.+.|+.+....+
T Consensus 117 iVDD~~~~~~~~~~NgI~i~~f~~ 140 (162)
T TIGR02251 117 IIDNSPYSYSLQPDNAIPIKSWFG 140 (162)
T ss_pred EEeCChhhhccCccCEeecCCCCC
Confidence 999999999999999987666554
No 133
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=98.61 E-value=9.4e-08 Score=83.86 Aligned_cols=76 Identities=25% Similarity=0.309 Sum_probs=62.9
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHh-hHHHHHHcCCeEEEEcCCCCcc--cc---CCCcEEEcCchhhhHHHH
Q 043738 256 HRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQ-TVEAAHDARMKCVAVASKHPVY--EL---GAADLVVRHLDELSVVDL 329 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~n-Dl~~A~~aG~~~I~v~~~~~~~--~~---~~ad~vv~sl~eL~~~~l 329 (368)
..+||.+..|+.+++.+|++|+++++|||..| |+-.|+..||..|.|..+.-+. +. ..+|..+++|.+....++
T Consensus 178 vvGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~f~~AVd~I~ 257 (262)
T KOG3040|consen 178 VVGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKPPVPPDLTADNFADAVDLII 257 (262)
T ss_pred EecCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccccCCcccccCCCCcchhhhhHHHHHHHHH
Confidence 46899999999999999999999999999985 7999999999999998432211 11 238889999999887777
Q ss_pred hc
Q 043738 330 KN 331 (368)
Q Consensus 330 ~~ 331 (368)
++
T Consensus 258 q~ 259 (262)
T KOG3040|consen 258 QN 259 (262)
T ss_pred hh
Confidence 65
No 134
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=98.61 E-value=2.5e-07 Score=75.32 Aligned_cols=119 Identities=21% Similarity=0.260 Sum_probs=97.4
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
-.+++.+.+.+++|++. +.+++.|+-....+...++-.|+. .+.++... +++.-..++..|+-+.+.|++
T Consensus 29 Gklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~--~~rv~a~a-------~~e~K~~ii~eLkk~~~k~vm 98 (152)
T COG4087 29 GKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIP--VERVFAGA-------DPEMKAKIIRELKKRYEKVVM 98 (152)
T ss_pred cEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCc--eeeeeccc-------CHHHHHHHHHHhcCCCcEEEE
Confidence 47889999999999999 999999999888899999988866 44444332 366777888888888899999
Q ss_pred EcCCHhhHHHHHHcCCeEEEEc-CCCCccccCCCcEEEcCchhhhHHHHh
Q 043738 282 FGNSNQTVEAAHDARMKCVAVA-SKHPVYELGAADLVVRHLDELSVVDLK 330 (368)
Q Consensus 282 IGDs~nDl~~A~~aG~~~I~v~-~~~~~~~~~~ad~vv~sl~eL~~~~l~ 330 (368)
|||+.||+.+.+++.+..+-+. .+...+.+..||+++.+..|+.+.+++
T Consensus 99 VGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~~ 148 (152)
T COG4087 99 VGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLLKD 148 (152)
T ss_pred ecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHhhc
Confidence 9999999999999998877777 444455556799999999999776654
No 135
>PRK10671 copA copper exporting ATPase; Provisional
Probab=98.53 E-value=2.8e-07 Score=99.68 Aligned_cols=113 Identities=14% Similarity=0.137 Sum_probs=87.9
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVF 282 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~I 282 (368)
.++||+.+.|+.|++.|++++++|+......+...+++|+..+|..+. |+....++++++..++++++|
T Consensus 650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~~~~~~~-----------p~~K~~~i~~l~~~~~~v~~v 718 (834)
T PRK10671 650 PLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGVL-----------PDGKAEAIKRLQSQGRQVAMV 718 (834)
T ss_pred cchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCEEEeCCC-----------HHHHHHHHHHHhhcCCEEEEE
Confidence 778999999999999999999999999999999999999976554321 333456777777788999999
Q ss_pred cCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEE--cCchhhhHHH
Q 043738 283 GNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV--RHLDELSVVD 328 (368)
Q Consensus 283 GDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv--~sl~eL~~~~ 328 (368)
||+.||+.+++.+|+.+.+- .........||+++ +++.++...+
T Consensus 719 GDg~nD~~al~~Agvgia~g--~g~~~a~~~ad~vl~~~~~~~i~~~i 764 (834)
T PRK10671 719 GDGINDAPALAQADVGIAMG--GGSDVAIETAAITLMRHSLMGVADAL 764 (834)
T ss_pred eCCHHHHHHHHhCCeeEEec--CCCHHHHHhCCEEEecCCHHHHHHHH
Confidence 99999999999999865552 23333334466555 6777776655
No 136
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=98.52 E-value=4e-07 Score=98.95 Aligned_cols=125 Identities=15% Similarity=0.185 Sum_probs=95.6
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCC----------------CCCCHHHHH
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHR----------------GKPDPEMFV 266 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~----------------~KP~~~~~~ 266 (368)
++.||+.+.++.|++.|++++++||.....+....+++|+...++.++++.+... ....|+-..
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~ 607 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKM 607 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHHH
Confidence 7789999999999999999999999999999999999999887777766654321 234566666
Q ss_pred HHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEE--cCchhhhHHH
Q 043738 267 YAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV--RHLDELSVVD 328 (368)
Q Consensus 267 ~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv--~sl~eL~~~~ 328 (368)
.+.+.++-..+.+.|+||+.||..++++|+++..+ ......-....||+++ +++..+...+
T Consensus 608 ~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~-g~~g~~va~~aaDivl~dd~~~~i~~~i 670 (884)
T TIGR01522 608 KIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAM-GQTGTDVAKEAADMILTDDDFATILSAI 670 (884)
T ss_pred HHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEec-CCCcCHHHHHhcCEEEcCCCHHHHHHHH
Confidence 66666666668899999999999999999965443 1111222223589999 6688886644
No 137
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=98.40 E-value=9.6e-07 Score=82.64 Aligned_cols=49 Identities=16% Similarity=0.187 Sum_probs=45.9
Q ss_pred ccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCC
Q 043738 206 TGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAED 254 (368)
Q Consensus 206 pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~ 254 (368)
|++.++|++|++.|++++|+|++.+..+...++++|+..+|+.+++++.
T Consensus 151 p~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~ 199 (303)
T PHA03398 151 PFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGR 199 (303)
T ss_pred hhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCC
Confidence 7788999999999999999999999999999999999999999888765
No 138
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=98.38 E-value=4.3e-06 Score=78.43 Aligned_cols=71 Identities=14% Similarity=0.089 Sum_probs=54.8
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHc----CCeEEEEcCCCCccccCCCcEEEcCchhhhHHHHhc
Q 043738 256 HRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDA----RMKCVAVASKHPVYELGAADLVVRHLDELSVVDLKN 331 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~a----G~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~l~~ 331 (368)
..+.-|...+.++++++|+..+++++|||+.||+.|.+.+ |+. |.|.... ..|.+.+++..++. ..|+.
T Consensus 170 p~g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~-vavg~a~-----~~A~~~l~~~~~v~-~~L~~ 242 (266)
T PRK10187 170 PRGTNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGIS-VKVGTGA-----TQASWRLAGVPDVW-SWLEM 242 (266)
T ss_pred CCCCCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeE-EEECCCC-----CcCeEeCCCHHHHH-HHHHH
Confidence 4455678999999999999999999999999999999988 644 4443221 23889999999884 44566
Q ss_pred cc
Q 043738 332 LA 333 (368)
Q Consensus 332 L~ 333 (368)
|+
T Consensus 243 l~ 244 (266)
T PRK10187 243 IT 244 (266)
T ss_pred HH
Confidence 55
No 139
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.36 E-value=5.2e-07 Score=75.95 Aligned_cols=98 Identities=18% Similarity=0.298 Sum_probs=77.5
Q ss_pred HHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHH
Q 043738 211 FVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVE 290 (368)
Q Consensus 211 lL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~ 290 (368)
-++.+...|++++|+|+.....++..++.+|+..+|..+ +-|...|..+++++++.+++|.||||..+|+.
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~~qG~---------~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlp 113 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHLYQGI---------SDKLAAFEELLKKLNLDPEEVAYVGDDLVDLP 113 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCceeeech---------HhHHHHHHHHHHHhCCCHHHhhhhcCccccHH
Confidence 466678889999999999999999999999988665543 23578899999999999999999999999999
Q ss_pred HHHHcCCeEEEEcCCCCccccCCCcEEEc
Q 043738 291 AAHDARMKCVAVASKHPVYELGAADLVVR 319 (368)
Q Consensus 291 ~A~~aG~~~I~v~~~~~~~~~~~ad~vv~ 319 (368)
+..++|+.++. ...+.. -...++||..
T Consensus 114 vm~~vGls~a~-~dAh~~-v~~~a~~Vt~ 140 (170)
T COG1778 114 VMEKVGLSVAV-ADAHPL-LKQRADYVTS 140 (170)
T ss_pred HHHHcCCcccc-cccCHH-HHHhhHhhhh
Confidence 99999987443 333321 1123566554
No 140
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=98.35 E-value=7.7e-07 Score=79.19 Aligned_cols=109 Identities=13% Similarity=0.115 Sum_probs=68.5
Q ss_pred ccccCccHHHHHHHHHhCCCcEEEEcCCChH-------HHHHHHH-HcCccccccEEEeCCCCCCCCCCHHHHHHHHHHc
Q 043738 201 IYRLRTGSKEFVNILMHYKIPMALVSTHPRK-------TLETAID-SIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLL 272 (368)
Q Consensus 201 ~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~-------~~~~~l~-~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~l 272 (368)
.+++.||+.+.|+.|.+.|..++++|..+.. ....+++ ++|...+-+.+++.+ |. .+
T Consensus 71 ~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~~~~~~~-----K~----------~v 135 (191)
T PF06941_consen 71 NLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDNLIFTGD-----KT----------LV 135 (191)
T ss_dssp T--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCCEEEESS-----GG----------GC
T ss_pred CCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchheEEEecC-----CC----------eE
Confidence 4689999999999999999778877776433 3334444 445333334555532 21 12
Q ss_pred CCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchhhhHHHHh
Q 043738 273 KFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDELSVVDLK 330 (368)
Q Consensus 273 gi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~l~ 330 (368)
+.+ ++|+|+...+..+...|+++|.+...+..... .-..+.+++|+...++.
T Consensus 136 ~~D----vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~--~~~Rv~~W~ei~~~i~~ 187 (191)
T PF06941_consen 136 GGD----VLIDDRPHNLEQFANAGIPVILFDQPYNRDES--NFPRVNNWEEIEDLILS 187 (191)
T ss_dssp --S----EEEESSSHHHSS-SSESSEEEEE--GGGTT----TSEEE-STTSHHHHHHH
T ss_pred ecc----EEecCChHHHHhccCCCceEEEEcCCCCCCCC--CCccCCCHHHHHHHHHh
Confidence 222 89999999999999999999999866554433 46788999999776654
No 141
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=98.26 E-value=4.7e-05 Score=68.08 Aligned_cols=120 Identities=9% Similarity=0.081 Sum_probs=89.8
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcC---ccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIG---IEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERC 279 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~g---l~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~ 279 (368)
.+++++...++.-+..|++++|.|.+....++.+..+.+ +..|++..+.. .++ .|-....|..+.+.+|.++.++
T Consensus 123 ~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~~gdl~~y~~gyfDt-~iG-~K~e~~sy~~I~~~Ig~s~~ei 200 (254)
T KOG2630|consen 123 HVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSDAGDLRKYISGYFDT-TIG-LKVESQSYKKIGHLIGKSPREI 200 (254)
T ss_pred cccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccCcchHHHHhhhhhhc-ccc-ceehhHHHHHHHHHhCCChhhe
Confidence 778999999999999999999999998888888887654 33333332222 112 3556788999999999999999
Q ss_pred EEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCC---CcEEEcCchhh
Q 043738 280 IVFGNSNQTVEAAHDARMKCVAVASKHPVYELGA---ADLVVRHLDEL 324 (368)
Q Consensus 280 l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~---ad~vv~sl~eL 324 (368)
+|.-|...-..+|..+|+.+..+.++........ .-.++.+|..|
T Consensus 201 LfLTd~~~Ea~aa~~aGl~a~l~~rPgna~l~dd~~~~y~~i~~F~~l 248 (254)
T KOG2630|consen 201 LFLTDVPREAAAARKAGLQAGLVSRPGNAPLPDDAKVEYCVIWSFEIL 248 (254)
T ss_pred EEeccChHHHHHHHhcccceeeeecCCCCCCCcccccceeeeccchhh
Confidence 9999999999999999999887764433222111 23455666655
No 142
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.19 E-value=1.9e-05 Score=68.08 Aligned_cols=95 Identities=14% Similarity=0.132 Sum_probs=60.9
Q ss_pred cCccHHHHHHHHHhCCCcEEEEcCCChHHHH---HHHHHc---CccccccEEEeCCC---------CCCCCC---CHHHH
Q 043738 204 LRTGSKEFVNILMHYKIPMALVSTHPRKTLE---TAIDSI---GIEEYFTAIVAAED---------VHRGKP---DPEMF 265 (368)
Q Consensus 204 ~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~---~~l~~~---gl~~~Fd~iv~~e~---------v~~~KP---~~~~~ 265 (368)
+.|++.++++.++++|++++++|+.+..... ..+..+ |..-....++++.. +...+| +.+.+
T Consensus 28 ~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~~~~e~i~~~~~~~K~~~l 107 (157)
T smart00775 28 THPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAALHREVISKKPEVFKIACL 107 (157)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhhhhcccccCCHHHHHHHHH
Confidence 3588999999999999999999999877663 555552 21111123444332 112333 34455
Q ss_pred HHHHHHcCCC-CCcEEEEcCCHhhHHHHHHcCCe
Q 043738 266 VYAAQLLKFI-PERCIVFGNSNQTVEAAHDARMK 298 (368)
Q Consensus 266 ~~~le~lgi~-p~~~l~IGDs~nDl~~A~~aG~~ 298 (368)
..+.+.+.-. ..-++.+||+.+|+++=.++|+.
T Consensus 108 ~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 108 RDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred HHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 5555544321 22345688999999999999987
No 143
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.17 E-value=7.1e-06 Score=75.02 Aligned_cols=43 Identities=12% Similarity=0.125 Sum_probs=36.4
Q ss_pred CCCCHHHHHHHHHHcCC--CCCcEEEEcCCHhhHHHHHHcCCeEE
Q 043738 258 GKPDPEMFVYAAQLLKF--IPERCIVFGNSNQTVEAAHDARMKCV 300 (368)
Q Consensus 258 ~KP~~~~~~~~le~lgi--~p~~~l~IGDs~nDl~~A~~aG~~~I 300 (368)
+--|...+..+++.+++ .+++|++|||+.||+.|++.+|++++
T Consensus 179 ~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~ 223 (225)
T TIGR02461 179 GSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFL 223 (225)
T ss_pred CCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEe
Confidence 44457888888888876 67799999999999999999998754
No 144
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=98.16 E-value=9.6e-06 Score=86.53 Aligned_cols=112 Identities=15% Similarity=0.128 Sum_probs=81.3
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
.+++|++.+.++.|++.|++++++|+..........+++|+..++. ..+..| +. +.++++ .+..++|
T Consensus 567 d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~~~~------~~p~~K--~~----~v~~l~-~~~~v~m 633 (741)
T PRK11033 567 DTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDFRAG------LLPEDK--VK----AVTELN-QHAPLAM 633 (741)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCeecC------CCHHHH--HH----HHHHHh-cCCCEEE
Confidence 3889999999999999999999999999999999999999963322 111112 23 444444 2468999
Q ss_pred EcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEE--cCchhhhHHH
Q 043738 282 FGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV--RHLDELSVVD 328 (368)
Q Consensus 282 IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv--~sl~eL~~~~ 328 (368)
|||+.||..+++.+++.+.+- .........+|+++ +++.+|...+
T Consensus 634 vGDgiNDapAl~~A~vgia~g--~~~~~a~~~adivl~~~~l~~l~~~i 680 (741)
T PRK11033 634 VGDGINDAPAMKAASIGIAMG--SGTDVALETADAALTHNRLRGLAQMI 680 (741)
T ss_pred EECCHHhHHHHHhCCeeEEec--CCCHHHHHhCCEEEecCCHHHHHHHH
Confidence 999999999999999765553 22223334477776 5666665433
No 145
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=98.13 E-value=6.5e-06 Score=89.85 Aligned_cols=125 Identities=14% Similarity=0.097 Sum_probs=88.7
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcccc----ccEEEeCCCC----------------CCCCCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEY----FTAIVAAEDV----------------HRGKPD 261 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~----Fd~iv~~e~v----------------~~~KP~ 261 (368)
.++.+++.+.++.|++.|++++++|+..........+++|+... ....+++.+. -..+..
T Consensus 536 Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~ 615 (917)
T TIGR01116 536 DPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVE 615 (917)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecC
Confidence 37899999999999999999999999999999999999998531 1112222110 111223
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcC--chhhhHHH
Q 043738 262 PEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRH--LDELSVVD 328 (368)
Q Consensus 262 ~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~s--l~eL~~~~ 328 (368)
|+--..+.+.++-..+.+.++||+.||+.|.++|++++.+- .+ .......||+++.+ +..+...+
T Consensus 616 P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g-~g-~~~ak~aAD~vl~dd~f~~i~~~i 682 (917)
T TIGR01116 616 PSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMG-SG-TEVAKEASDMVLADDNFATIVAAV 682 (917)
T ss_pred HHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECC-CC-cHHHHHhcCeEEccCCHHHHHHHH
Confidence 44446666666666678889999999999999999865442 22 22222359999977 88876654
No 146
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=98.09 E-value=2.7e-06 Score=73.24 Aligned_cols=82 Identities=15% Similarity=0.212 Sum_probs=64.4
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcc-ccc-cEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIE-EYF-TAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERC 279 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~-~~F-d~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~ 279 (368)
+.++||+.++|+.++.. +.++|+|++.+.++..+++.++.. .+| +.+++.++.. .+. .+.+-..++.+.+.+
T Consensus 57 v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~~~F~~ri~~rd~~~--~~~---~KdL~~i~~~d~~~v 130 (156)
T TIGR02250 57 TKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISRDESG--SPH---TKSLLRLFPADESMV 130 (156)
T ss_pred EEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCCCeeccEEEEeccCC--CCc---cccHHHHcCCCcccE
Confidence 68899999999999966 999999999999999999999988 488 6777776543 111 112224467789999
Q ss_pred EEEcCCHhhH
Q 043738 280 IVFGNSNQTV 289 (368)
Q Consensus 280 l~IGDs~nDl 289 (368)
+.|+|+..-.
T Consensus 131 vivDd~~~~~ 140 (156)
T TIGR02250 131 VIIDDREDVW 140 (156)
T ss_pred EEEeCCHHHh
Confidence 9999998543
No 147
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=98.07 E-value=1.6e-05 Score=83.31 Aligned_cols=113 Identities=16% Similarity=0.144 Sum_probs=81.9
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVF 282 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~I 282 (368)
++.|++.+.++.|++.|++++++|+.+........+.+|+.++|.. .. |+--..+.+.+.-....+.|+
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~v~a~---------~~--PedK~~~v~~lq~~g~~Vamv 514 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDFIAE---------AT--PEDKIALIRQEQAEGKLVAMT 514 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCEEEcC---------CC--HHHHHHHHHHHHHcCCeEEEE
Confidence 7889999999999999999999999999999999999998754321 11 333333333333334579999
Q ss_pred cCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEE--cCchhhhHHH
Q 043738 283 GNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV--RHLDELSVVD 328 (368)
Q Consensus 283 GDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv--~sl~eL~~~~ 328 (368)
||+.||..+..++++++++- .........+|++. +++..+...+
T Consensus 515 GDG~NDapAL~~AdvGiAm~--~gt~~akeaadivLldd~~s~Iv~av 560 (675)
T TIGR01497 515 GDGTNDAPALAQADVGVAMN--SGTQAAKEAANMVDLDSDPTKLIEVV 560 (675)
T ss_pred CCCcchHHHHHhCCEeEEeC--CCCHHHHHhCCEEECCCCHHHHHHHH
Confidence 99999999999999876653 22222233478877 4566665444
No 148
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=98.05 E-value=0.0001 Score=67.23 Aligned_cols=98 Identities=7% Similarity=-0.059 Sum_probs=62.4
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHH---HHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCC-CCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKT---LETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKF-IPE 277 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~---~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi-~p~ 277 (368)
.+..|++.++++.++++|+.|+++||.+... +...|.+.|+..+ +.++........+..........+++-- ...
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~-~~LiLR~~~d~~~~~~~yKs~~R~~l~~~GYr 197 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW-KHLILRGLEDSNKTVVTYKSEVRKSLMEEGYR 197 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc-CeeeecCCCCCCchHhHHHHHHHHHHHhCCce
Confidence 5889999999999999999999999998665 6677778888765 5555543212233211111122212211 123
Q ss_pred cEEEEcCCHhhHHHHHHcCCeEEE
Q 043738 278 RCIVFGNSNQTVEAAHDARMKCVA 301 (368)
Q Consensus 278 ~~l~IGDs~nDl~~A~~aG~~~I~ 301 (368)
-+..|||..+|+.+ ..+|.++.-
T Consensus 198 Iv~~iGDq~sDl~G-~~~~~RtFK 220 (229)
T TIGR01675 198 IWGNIGDQWSDLLG-SPPGRRTFK 220 (229)
T ss_pred EEEEECCChHHhcC-CCccCceee
Confidence 46889999999955 234444443
No 149
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=98.03 E-value=2.9e-05 Score=81.41 Aligned_cols=113 Identities=15% Similarity=0.125 Sum_probs=85.3
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVF 282 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~I 282 (368)
++.|++++.+++|++.|+++.++|+-+........+++|+.++|.. -.|+--..+.+.++-.-+-+.|+
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~v~A~-----------~~PedK~~iV~~lQ~~G~~VaMt 509 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDRFVAE-----------CKPEDKINVIREEQAKGHIVAMT 509 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCceEEcC-----------CCHHHHHHHHHHHHhCCCEEEEE
Confidence 7889999999999999999999999999999999999999754322 12444455555555444678999
Q ss_pred cCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEE--cCchhhhHHH
Q 043738 283 GNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV--RHLDELSVVD 328 (368)
Q Consensus 283 GDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv--~sl~eL~~~~ 328 (368)
||+.||..+..+|.++..|- ....-....||.+. +++..+...+
T Consensus 510 GDGvNDAPALa~ADVGIAMg--sGTdvAkeAADiVLldd~ls~Iv~av 555 (673)
T PRK14010 510 GDGTNDAPALAEANVGLAMN--SGTMSAKEAANLIDLDSNPTKLMEVV 555 (673)
T ss_pred CCChhhHHHHHhCCEEEEeC--CCCHHHHHhCCEEEcCCCHHHHHHHH
Confidence 99999999999999765553 22222334588887 5677666554
No 150
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=98.02 E-value=2.9e-05 Score=81.47 Aligned_cols=113 Identities=14% Similarity=0.120 Sum_probs=84.2
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVF 282 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~I 282 (368)
++.||+++.++.|++.|+++.++|+-+......+.+.+|++++|... .|+--..+.+.++-.-+-+.|+
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~v~A~~-----------~PedK~~iV~~lQ~~G~~VaMt 513 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFLAEA-----------TPEDKLALIRQEQAEGRLVAMT 513 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcEEEccC-----------CHHHHHHHHHHHHHcCCeEEEE
Confidence 67899999999999999999999999999999999999997533221 2444445555554444669999
Q ss_pred cCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEE--cCchhhhHHH
Q 043738 283 GNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV--RHLDELSVVD 328 (368)
Q Consensus 283 GDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv--~sl~eL~~~~ 328 (368)
||+.||..+..+|.++..|- ....-....||.+. +++..+...+
T Consensus 514 GDGvNDAPALa~ADVGIAMg--sGTdvAkeAADiVLldd~~s~Iv~av 559 (679)
T PRK01122 514 GDGTNDAPALAQADVGVAMN--SGTQAAKEAGNMVDLDSNPTKLIEVV 559 (679)
T ss_pred CCCcchHHHHHhCCEeEEeC--CCCHHHHHhCCEEEeCCCHHHHHHHH
Confidence 99999999999999766553 22222233588887 4566665554
No 151
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=98.01 E-value=2.7e-05 Score=81.91 Aligned_cols=114 Identities=20% Similarity=0.244 Sum_probs=84.4
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
..+.|+..+.++.|++.|++++++|+-.....+...+++|+++++..+. |+--....++++-.-..++|
T Consensus 536 D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~v~Aell-----------PedK~~~V~~l~~~g~~Vam 604 (713)
T COG2217 536 DELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDEVRAELL-----------PEDKAEIVRELQAEGRKVAM 604 (713)
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHhheccCC-----------cHHHHHHHHHHHhcCCEEEE
Confidence 4888999999999999999999999999999999999999976554432 22223333444433378999
Q ss_pred EcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEE--cCchhhhHHH
Q 043738 282 FGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV--RHLDELSVVD 328 (368)
Q Consensus 282 IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv--~sl~eL~~~~ 328 (368)
|||+.||..+...+.++..+ +....-....||.++ +++..++..+
T Consensus 605 VGDGINDAPALA~AdVGiAm--G~GtDvA~eaADvvL~~~dL~~v~~ai 651 (713)
T COG2217 605 VGDGINDAPALAAADVGIAM--GSGTDVAIEAADVVLMRDDLSAVPEAI 651 (713)
T ss_pred EeCCchhHHHHhhcCeeEee--cCCcHHHHHhCCEEEecCCHHHHHHHH
Confidence 99999999999999976555 223333344588877 4566665544
No 152
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=98.00 E-value=9.6e-05 Score=76.69 Aligned_cols=46 Identities=11% Similarity=0.139 Sum_probs=41.0
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEE--cCCHhhHHHHHHcCCeEEEEc
Q 043738 258 GKPDPEMFVYAAQLLKFIPERCIVF--GNSNQTVEAAHDARMKCVAVA 303 (368)
Q Consensus 258 ~KP~~~~~~~~le~lgi~p~~~l~I--GDs~nDl~~A~~aG~~~I~v~ 303 (368)
+-.|...++.+++.+++..+++++| ||+.||++|.+.+|.++++-.
T Consensus 611 gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM~~ 658 (694)
T PRK14502 611 GNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILVQR 658 (694)
T ss_pred CCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEEcC
Confidence 4566899999999999999999999 999999999999999877733
No 153
>PLN02382 probable sucrose-phosphatase
Probab=98.00 E-value=8.8e-05 Score=73.89 Aligned_cols=49 Identities=16% Similarity=0.217 Sum_probs=41.7
Q ss_pred CCCCCCCHHHHHHHHHHc---CCCCCcEEEEcCCHhhHHHHHHcC-CeEEEEc
Q 043738 255 VHRGKPDPEMFVYAAQLL---KFIPERCIVFGNSNQTVEAAHDAR-MKCVAVA 303 (368)
Q Consensus 255 v~~~KP~~~~~~~~le~l---gi~p~~~l~IGDs~nDl~~A~~aG-~~~I~v~ 303 (368)
++.+-.|..+++++++++ |++++++++|||+.||++|.+.+| .++++-+
T Consensus 170 ~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~N 222 (413)
T PLN02382 170 LPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSN 222 (413)
T ss_pred EeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcC
Confidence 345556789999999999 999999999999999999999999 5655533
No 154
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.97 E-value=0.00016 Score=67.92 Aligned_cols=44 Identities=14% Similarity=0.095 Sum_probs=35.5
Q ss_pred CCCCHHHHHHHHHHcCCC--CCcEEEEcCCHhhHHHHHHcCCeEEE
Q 043738 258 GKPDPEMFVYAAQLLKFI--PERCIVFGNSNQTVEAAHDARMKCVA 301 (368)
Q Consensus 258 ~KP~~~~~~~~le~lgi~--p~~~l~IGDs~nDl~~A~~aG~~~I~ 301 (368)
+-.|....+.+.+.++-. +-.++.+|||.||+.|.+.+.+.+|.
T Consensus 206 ~~dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~D~~vvi 251 (302)
T PRK12702 206 SLPGEQAVQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWSEQKVVL 251 (302)
T ss_pred CCCHHHHHHHHHHHHHhccCCceEEEecCChhhHHHHHhCCeeEEe
Confidence 345677888888877654 45899999999999999999988655
No 155
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=97.95 E-value=0.00015 Score=73.60 Aligned_cols=90 Identities=7% Similarity=0.040 Sum_probs=55.3
Q ss_pred cCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHH-cCcccc--------ccEEEeCCCCCCCCCCH-HHHHHHHHHcC
Q 043738 204 LRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDS-IGIEEY--------FTAIVAAEDVHRGKPDP-EMFVYAAQLLK 273 (368)
Q Consensus 204 ~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~-~gl~~~--------Fd~iv~~e~v~~~KP~~-~~~~~~le~lg 273 (368)
+.+.+.+ .++++|. .+++|.++..+++.+.+. +|++.. .+..+++.-.+..-... +-...+.+.+|
T Consensus 111 l~~~a~~---~~~~~g~-~vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g~~~c~Ge~Kv~rl~~~~g 186 (497)
T PLN02177 111 VHPETWR---VFNSFGK-RYIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKKPGVLVGDHKRDAVLKEFG 186 (497)
T ss_pred cCHHHHH---HHHhCCC-EEEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeecCCCCCccHHHHHHHHHHhC
Confidence 4444444 4466774 499999999999999975 776632 13344443211100011 11233335566
Q ss_pred CCCCcEEEEcCCHhhHHHHHHcCCe
Q 043738 274 FIPERCIVFGNSNQTVEAAHDARMK 298 (368)
Q Consensus 274 i~p~~~l~IGDs~nDl~~A~~aG~~ 298 (368)
.+... +++|||.+|+.+...++-.
T Consensus 187 ~~~~~-~aYgDS~sD~plL~~a~e~ 210 (497)
T PLN02177 187 DALPD-LGLGDRETDHDFMSICKEG 210 (497)
T ss_pred CCCce-EEEECCccHHHHHHhCCcc
Confidence 55444 9999999999999999865
No 156
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=97.95 E-value=4.9e-05 Score=81.16 Aligned_cols=72 Identities=10% Similarity=-0.006 Sum_probs=51.4
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchhhhHHHHhccc
Q 043738 256 HRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDELSVVDLKNLA 333 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~l~~L~ 333 (368)
..+-.|..+++.+++ +++++.+++|||+.||+.|.+.++...+.+..++. ...|++.+++.+|+ ...|+.|+
T Consensus 653 p~~vnKG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~---~s~A~~~l~~~~eV-~~~L~~l~ 724 (726)
T PRK14501 653 PAGVNKGRAVRRLLE--AGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG---ESRARYRLPSQREV-RELLRRLL 724 (726)
T ss_pred ECCCCHHHHHHHHHh--cCCCCEEEEECCCCChHHHHHhcccCceEEEECCC---CCcceEeCCCHHHH-HHHHHHHh
Confidence 344556888888888 77889999999999999999997432233332222 23589999999886 44455554
No 157
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=97.92 E-value=7.8e-06 Score=74.92 Aligned_cols=90 Identities=11% Similarity=0.115 Sum_probs=58.5
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChH---HHHHHHHHcCccccccEEEeCCCCCCC----CCCHHHHHHHHHHcCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRK---TLETAIDSIGIEEYFTAIVAAEDVHRG----KPDPEMFVYAAQLLKF 274 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~---~~~~~l~~~gl~~~Fd~iv~~e~v~~~----KP~~~~~~~~le~lgi 274 (368)
.+..||+.+|++.++++|+.|+++||.... .+...|.+.|+..+-..++-....... .-|..-...+.++ |.
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~-Gy 192 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKK-GY 192 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESSTSS------SHHHHHHHHHT-TE
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhccccccccccccccccchHHHHHHHHc-CC
Confidence 488899999999999999999999997544 455666777866433333333222111 1123334444444 32
Q ss_pred CCCcEEEEcCCHhhHHHHHH
Q 043738 275 IPERCIVFGNSNQTVEAAHD 294 (368)
Q Consensus 275 ~p~~~l~IGDs~nDl~~A~~ 294 (368)
.-++.|||..+|+..++.
T Consensus 193 --~Ii~~iGD~~~D~~~~~~ 210 (229)
T PF03767_consen 193 --RIIANIGDQLSDFSGAKT 210 (229)
T ss_dssp --EEEEEEESSGGGCHCTHH
T ss_pred --cEEEEeCCCHHHhhcccc
Confidence 238999999999988443
No 158
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=97.91 E-value=6.7e-05 Score=69.60 Aligned_cols=51 Identities=22% Similarity=0.362 Sum_probs=38.9
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCC
Q 043738 256 HRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHP 307 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~ 307 (368)
+..--|...++++++++++++++++++|||.||+.|. ..+...|.|.+...
T Consensus 161 P~~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~Na~~ 211 (247)
T PF05116_consen 161 PKGASKGAALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGNAQP 211 (247)
T ss_dssp ETT-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TTS-H
T ss_pred cCCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcCCCH
Confidence 3445568999999999999999999999999999999 66667777765443
No 159
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=97.89 E-value=0.00051 Score=63.84 Aligned_cols=103 Identities=13% Similarity=0.285 Sum_probs=75.4
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHH---HcCccccccEE-------E----e-C---------C--CC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAID---SIGIEEYFTAI-------V----A-A---------E--DV 255 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~---~~gl~~~Fd~i-------v----~-~---------e--~v 255 (368)
..+-+.+.++++.+...|+++..+|.....+..+.++ .+|++ |+.. + + . + -.
T Consensus 80 ~lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~--fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlf 157 (252)
T PF11019_consen 80 ELIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGID--FSSSSFPEDGIISFPVFDSALSRAPSFYDGILF 157 (252)
T ss_pred EEcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCC--ccccccccCcceecccccCCCCCCceeecCeEE
Confidence 4667899999999999999999999988776655554 45654 2111 0 0 0 0 01
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHH----HcCCeEEEEcCCC
Q 043738 256 HRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAH----DARMKCVAVASKH 306 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~----~aG~~~I~v~~~~ 306 (368)
..+..+..++..+++++|..|+.+|||+|+...+.... ..|+.++++....
T Consensus 158 t~~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~ 212 (252)
T PF11019_consen 158 TGGQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYTG 212 (252)
T ss_pred eCCCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcc
Confidence 23456789999999999999999999999997765544 4688888887443
No 160
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=97.79 E-value=8.4e-05 Score=81.52 Aligned_cols=125 Identities=17% Similarity=0.143 Sum_probs=85.5
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCC----------------CCCCCHHHHH
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVH----------------RGKPDPEMFV 266 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~----------------~~KP~~~~~~ 266 (368)
++.|++.+.++.|++.|++++++|+-....+....+.+|+..--..++++.+.. ...-.|+--.
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~ 658 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQ 658 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHH
Confidence 788999999999999999999999999999999999999863222334332211 1122233334
Q ss_pred HHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEc--CchhhhHHH
Q 043738 267 YAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVR--HLDELSVVD 328 (368)
Q Consensus 267 ~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~--sl~eL~~~~ 328 (368)
.+.+.++-.-..+.|+||+.||..|.++|.++..+-..+ ..-....||+++- +|..+...+
T Consensus 659 ~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~g-tdvAk~aADivL~dd~f~~I~~~i 721 (941)
T TIGR01517 659 LLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISG-TEVAKEASDIILLDDNFASIVRAV 721 (941)
T ss_pred HHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCc-cHHHHHhCCEEEecCCHHHHHHHH
Confidence 444444333457999999999999999999765542122 2223345899986 666665444
No 161
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=97.79 E-value=9.9e-05 Score=80.20 Aligned_cols=122 Identities=15% Similarity=0.150 Sum_probs=84.6
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCC----------------CCCCCHHHHH
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVH----------------RGKPDPEMFV 266 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~----------------~~KP~~~~~~ 266 (368)
++.|++.+.++.|++.|+++.++|+-+........+++|+.. +.++++.+.. ...-.|+--.
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~ 592 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--NDFLLGADIEELSDEELARELRKYHIFARLTPMQKS 592 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC--CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHH
Confidence 778999999999999999999999999999999999999962 2333332211 0112233333
Q ss_pred HHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEE--cCchhhhHHH
Q 043738 267 YAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV--RHLDELSVVD 328 (368)
Q Consensus 267 ~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv--~sl~eL~~~~ 328 (368)
.+.+.++-.-..+.|+||+.||..+.++|.++..+- ++ ..-....||.++ +++..+...+
T Consensus 593 ~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg-~g-tdvAk~aADiVLldd~~~~I~~ai 654 (867)
T TIGR01524 593 RIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVD-TA-ADIAKEASDIILLEKSLMVLEEGV 654 (867)
T ss_pred HHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeC-Cc-cHHHHHhCCEEEecCChHHHHHHH
Confidence 444444434467999999999999999999876553 22 222234588887 5666665444
No 162
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=97.78 E-value=7.1e-05 Score=80.17 Aligned_cols=119 Identities=17% Similarity=0.131 Sum_probs=82.8
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCC----------------------CCCCC
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDV----------------------HRGKP 260 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v----------------------~~~KP 260 (368)
++.|++.+.++.|++.|+++.++|+.+........+++|+... +++++++ ...+-
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~ 518 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTN---IYTADVLLKGDNRDDLPSGELGEMVEDADGFAEV 518 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC---CcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEec
Confidence 7889999999999999999999999999999999999998641 1211111 01122
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEE--cCchhhhH
Q 043738 261 DPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV--RHLDELSV 326 (368)
Q Consensus 261 ~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv--~sl~eL~~ 326 (368)
.|+--..+.+.++-.-..+.|+||+.||..+.++|.++..+ .+ ...-....||.++ +++..+..
T Consensus 519 ~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm-~~-gtdvAkeaADivLl~d~l~~I~~ 584 (755)
T TIGR01647 519 FPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAV-AG-ATDAARSAADIVLTEPGLSVIVD 584 (755)
T ss_pred CHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEe-cC-CcHHHHHhCCEEEEcCChHHHHH
Confidence 34444445555554557799999999999999999987555 22 2222233588777 44554443
No 163
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=97.78 E-value=8.5e-05 Score=80.95 Aligned_cols=122 Identities=12% Similarity=0.090 Sum_probs=86.9
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCC----------------CCCCCHHHHH
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVH----------------RGKPDPEMFV 266 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~----------------~~KP~~~~~~ 266 (368)
++.|++.+.++.|++.|+++.++|+-+........+.+|+.. +.++++.+.. ...-.|+--.
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~ 627 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--GEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKS 627 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHH
Confidence 788999999999999999999999999999999999999952 2334433221 1122344445
Q ss_pred HHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEE--cCchhhhHHH
Q 043738 267 YAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV--RHLDELSVVD 328 (368)
Q Consensus 267 ~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv--~sl~eL~~~~ 328 (368)
.+.+.++-.-+-+.|+||+.||..+.++|.++..+- ++ ..-....||.++ ++|..+...+
T Consensus 628 ~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg-~g-tdvAkeaADiVLldd~f~~Iv~ai 689 (903)
T PRK15122 628 RVLKALQANGHTVGFLGDGINDAPALRDADVGISVD-SG-ADIAKESADIILLEKSLMVLEEGV 689 (903)
T ss_pred HHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeC-cc-cHHHHHhcCEEEecCChHHHHHHH
Confidence 555555544567999999999999999999775542 22 222234589888 6676665544
No 164
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=97.77 E-value=8.8e-05 Score=80.80 Aligned_cols=123 Identities=12% Similarity=0.092 Sum_probs=87.1
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCC----------------CCCCCHHHH
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVH----------------RGKPDPEMF 265 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~----------------~~KP~~~~~ 265 (368)
.++.|++.+.++.|++.|+++.++|+-+........+.+|+. -+.++++.+.. ...-.|+--
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~--~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K 626 (902)
T PRK10517 549 DPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLD--AGEVLIGSDIETLSDDELANLAERTTLFARLTPMHK 626 (902)
T ss_pred CcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC--ccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHH
Confidence 377899999999999999999999999999999999999995 23344443321 112234444
Q ss_pred HHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEE--cCchhhhHHH
Q 043738 266 VYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV--RHLDELSVVD 328 (368)
Q Consensus 266 ~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv--~sl~eL~~~~ 328 (368)
..+.+.++-.-.-+.|+||+.||..+.++|.++..+- ++ ..-....||.++ +++..+...+
T Consensus 627 ~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg-~g-tdvAkeaADiVLldd~~~~I~~ai 689 (902)
T PRK10517 627 ERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD-GA-VDIAREAADIILLEKSLMVLEEGV 689 (902)
T ss_pred HHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeC-Cc-CHHHHHhCCEEEecCChHHHHHHH
Confidence 4455555444567999999999999999999775553 22 222334588888 5666665544
No 165
>PTZ00174 phosphomannomutase; Provisional
Probab=97.76 E-value=9.7e-05 Score=68.43 Aligned_cols=46 Identities=15% Similarity=0.083 Sum_probs=38.7
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcC----CHhhHHHHHHcCCeEEEEc
Q 043738 254 DVHRGKPDPEMFVYAAQLLKFIPERCIVFGN----SNQTVEAAHDARMKCVAVA 303 (368)
Q Consensus 254 ~v~~~KP~~~~~~~~le~lgi~p~~~l~IGD----s~nDl~~A~~aG~~~I~v~ 303 (368)
-...+--|..+++.++++ ++++++||| +.||++|.+.+|...+.|.
T Consensus 182 I~~~gvsKg~al~~L~~~----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~ 231 (247)
T PTZ00174 182 VFPKGWDKTYCLRHLEND----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK 231 (247)
T ss_pred eeeCCCcHHHHHHHHHhh----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC
Confidence 345566678999999999 599999999 8999999998887767776
No 166
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=97.75 E-value=0.00057 Score=63.51 Aligned_cols=91 Identities=9% Similarity=0.110 Sum_probs=56.5
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChH---HHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHH-HHHHH-cCCCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRK---TLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFV-YAAQL-LKFIP 276 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~---~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~-~~le~-lgi~p 276 (368)
.+..|++.+|.+.+++.|++|+++||.... .+...|.+.|+..+ +.++-.......+...--++ ...++ ..-..
T Consensus 144 ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~-~~LiLR~~~D~~~~~av~yKs~~R~~li~eGY 222 (275)
T TIGR01680 144 APALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW-EKLILKDPQDNSAENAVEYKTAARAKLIQEGY 222 (275)
T ss_pred CCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc-ceeeecCCCCCccchhHHHHHHHHHHHHHcCc
Confidence 588899999999999999999999998754 34455666777643 54444432111121222222 11121 11123
Q ss_pred CcEEEEcCCHhhHHHHH
Q 043738 277 ERCIVFGNSNQTVEAAH 293 (368)
Q Consensus 277 ~~~l~IGDs~nDl~~A~ 293 (368)
.-+..|||..+|+.+..
T Consensus 223 rIv~~iGDq~sDl~G~~ 239 (275)
T TIGR01680 223 NIVGIIGDQWNDLKGEH 239 (275)
T ss_pred eEEEEECCCHHhccCCC
Confidence 44689999999995444
No 167
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=97.74 E-value=0.00014 Score=80.47 Aligned_cols=125 Identities=13% Similarity=0.098 Sum_probs=87.0
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcccc----------ccEEEeCCCCC---------------
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEY----------FTAIVAAEDVH--------------- 256 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~----------Fd~iv~~e~v~--------------- 256 (368)
.++.+++.+.++.|++.|++++++|+..........+.+|+..- -..++++.+..
T Consensus 645 Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~ 724 (1053)
T TIGR01523 645 DPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCL 724 (1053)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCe
Confidence 48899999999999999999999999999999999999998532 12345543321
Q ss_pred -CCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcC--chhhhHH
Q 043738 257 -RGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRH--LDELSVV 327 (368)
Q Consensus 257 -~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~s--l~eL~~~ 327 (368)
...-.|+--..+.+.++-.-..+.++||+.||..|.+.|.++..+-..+.. .....||+++.+ |..+...
T Consensus 725 V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~-vak~aADivl~dd~f~~I~~~ 797 (1053)
T TIGR01523 725 VIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSD-VAKDASDIVLSDDNFASILNA 797 (1053)
T ss_pred EEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccH-HHHHhcCEEEecCCHHHHHHH
Confidence 112234444445555544456799999999999999999977554212221 223358999854 6665543
No 168
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=97.74 E-value=9.3e-05 Score=68.79 Aligned_cols=68 Identities=12% Similarity=0.085 Sum_probs=52.2
Q ss_pred CCCCCCCHHHHHHHHHHcCCC--CCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCC----CcEEEcCch
Q 043738 255 VHRGKPDPEMFVYAAQLLKFI--PERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGA----ADLVVRHLD 322 (368)
Q Consensus 255 v~~~KP~~~~~~~~le~lgi~--p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~----ad~vv~sl~ 322 (368)
...+-.|...++++++++|++ .+++++|||+.||++|++.+|.+++|-+......++.. +++++.+.+
T Consensus 171 ~~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~ 244 (256)
T TIGR01486 171 LGAGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPG 244 (256)
T ss_pred ecCCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCC
Confidence 345667789999999999999 99999999999999999999998777554432123333 348876543
No 169
>PLN02423 phosphomannomutase
Probab=97.63 E-value=0.00014 Score=67.31 Aligned_cols=47 Identities=15% Similarity=0.129 Sum_probs=39.0
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcC----CHhhHHHHHHcCCeEEEEcCCC
Q 043738 255 VHRGKPDPEMFVYAAQLLKFIPERCIVFGN----SNQTVEAAHDARMKCVAVASKH 306 (368)
Q Consensus 255 v~~~KP~~~~~~~~le~lgi~p~~~l~IGD----s~nDl~~A~~aG~~~I~v~~~~ 306 (368)
+..+--|..+++.++ +++++++||| +.||++|.+.-|..++.|.++.
T Consensus 184 ~~~gvnKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~ 234 (245)
T PLN02423 184 FPQGWDKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPD 234 (245)
T ss_pred eeCCCCHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHH
Confidence 455666677777777 8999999999 7999999999999988888654
No 170
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=97.62 E-value=0.00025 Score=61.11 Aligned_cols=91 Identities=15% Similarity=0.192 Sum_probs=64.6
Q ss_pred ccHHHHHHHHHhCCCcEEEEcCCChHHH----HHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 206 TGSKEFVNILMHYKIPMALVSTHPRKTL----ETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 206 pg~~elL~~Lk~~Gi~vaivSn~~~~~~----~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
.-+++|+....++|-.++++|+...-.+ ..+.+.+.+......++.++. .||...---+.++..++ -++
T Consensus 117 evA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gdk---~k~~qy~Kt~~i~~~~~----~Ih 189 (237)
T COG3700 117 EVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGDK---PKPGQYTKTQWIQDKNI----RIH 189 (237)
T ss_pred HHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccCC---CCcccccccHHHHhcCc----eEE
Confidence 3467888888999999999999754433 344456666655556666653 24433334455666555 499
Q ss_pred EcCCHhhHHHHHHcCCeEEEEc
Q 043738 282 FGNSNQTVEAAHDARMKCVAVA 303 (368)
Q Consensus 282 IGDs~nDl~~A~~aG~~~I~v~ 303 (368)
.|||.+|+.+|+++|..-|-+-
T Consensus 190 YGDSD~Di~AAkeaG~RgIRil 211 (237)
T COG3700 190 YGDSDNDITAAKEAGARGIRIL 211 (237)
T ss_pred ecCCchhhhHHHhcCccceeEE
Confidence 9999999999999999987775
No 171
>PLN02645 phosphoglycolate phosphatase
Probab=97.59 E-value=0.00063 Score=65.26 Aligned_cols=90 Identities=13% Similarity=0.175 Sum_probs=69.8
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHH---HHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTL---ETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERC 279 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~---~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~ 279 (368)
.++||+.++|+.|+++|++++++||...... ...++.+|+...++.|+++.. .....++..+......
T Consensus 44 ~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~ts~~---------~~~~~l~~~~~~~~~~ 114 (311)
T PLN02645 44 KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFSSSF---------AAAAYLKSINFPKDKK 114 (311)
T ss_pred ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEeehHH---------HHHHHHHhhccCCCCE
Confidence 4569999999999999999999999874433 445577898877888887742 4555666656554556
Q ss_pred EEEcCCHhhHHHHHHcCCeEEE
Q 043738 280 IVFGNSNQTVEAAHDARMKCVA 301 (368)
Q Consensus 280 l~IGDs~nDl~~A~~aG~~~I~ 301 (368)
++++++..+.+.++++|+.++.
T Consensus 115 V~viG~~~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 115 VYVIGEEGILEELELAGFQYLG 136 (311)
T ss_pred EEEEcCHHHHHHHHHCCCEEec
Confidence 8888888999999999998765
No 172
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=97.56 E-value=2e-05 Score=67.80 Aligned_cols=84 Identities=15% Similarity=0.235 Sum_probs=59.6
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCc-cccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGI-EEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCI 280 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl-~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l 280 (368)
+.+.||+.+||+.+... +.++|.|.+...++..+++.+.- ..+|+.+++.+.....+. .+..-++.+|-+.+++|
T Consensus 35 v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~~~ldp~~~~~~~~~~r~~~~~~~~---~~~KdL~~l~~~~~~vv 110 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVLDALDPNGKLFSRRLYRDDCTFDKG---SYIKDLSKLGRDLDNVV 110 (159)
T ss_dssp EEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHHHHHTTTTSSEEEEEEGGGSEEETT---EEE--GGGSSS-GGGEE
T ss_pred EeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHHHhhhhhcccccccccccccccccc---ccccchHHHhhccccEE
Confidence 57899999999999766 99999999999999999999876 567888887764321111 01145556677889999
Q ss_pred EEcCCHhhH
Q 043738 281 VFGNSNQTV 289 (368)
Q Consensus 281 ~IGDs~nDl 289 (368)
+|+|+..-.
T Consensus 111 ivDD~~~~~ 119 (159)
T PF03031_consen 111 IVDDSPRKW 119 (159)
T ss_dssp EEES-GGGG
T ss_pred EEeCCHHHe
Confidence 999999754
No 173
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.53 E-value=0.0011 Score=59.46 Aligned_cols=114 Identities=23% Similarity=0.234 Sum_probs=72.9
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccc--------cccEE-------------------EeCC-
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEE--------YFTAI-------------------VAAE- 253 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~--------~Fd~i-------------------v~~e- 253 (368)
..+.||+.+.++.+... ++-+++|.+-+.+++...+.+|+.. -+|.+ +.++
T Consensus 82 a~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~gee 160 (315)
T COG4030 82 AKLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEE 160 (315)
T ss_pred cccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHH
Confidence 58899999999999987 7778888887888888888877521 01210 0011
Q ss_pred -------------------------CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHc-CCeEEEEcCCCC
Q 043738 254 -------------------------DVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDA-RMKCVAVASKHP 307 (368)
Q Consensus 254 -------------------------~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~a-G~~~I~v~~~~~ 307 (368)
.++- --+..+.+..++.-+++-+ +++||||.+|++|.+.+ |-+.++|.-+.+
T Consensus 161 lfe~lDe~F~rLip~E~gki~~~vk~VGg-g~ka~i~e~~~ele~~d~s-a~~VGDSItDv~ml~~~rgrGglAvaFNGN 238 (315)
T COG4030 161 LFEKLDELFSRLIPSEVGKIVESVKAVGG-GEKAKIMEGYCELEGIDFS-AVVVGDSITDVKMLEAARGRGGLAVAFNGN 238 (315)
T ss_pred HHHHHHHHHhhcCHHHHHHHHHhhhhccC-cchhHHHHHHHhhcCCCcc-eeEecCcccchHHHHHhhccCceEEEecCC
Confidence 0111 2234555556666666555 99999999999999887 333344443333
Q ss_pred ccccCCCcEEE
Q 043738 308 VYELGAADLVV 318 (368)
Q Consensus 308 ~~~~~~ad~vv 318 (368)
.+.+..||..|
T Consensus 239 eYal~eAdVAv 249 (315)
T COG4030 239 EYALKEADVAV 249 (315)
T ss_pred cccccccceEE
Confidence 35555677655
No 174
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=97.44 E-value=0.00072 Score=71.36 Aligned_cols=114 Identities=16% Similarity=0.166 Sum_probs=82.4
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
.++.|++...+..|++.|++++++||-+....+...+++| ++.+++ +..+..| .+.++.+-+ ....+.|
T Consensus 722 D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VG----i~~V~a-ev~P~~K--~~~Ik~lq~----~~~~VaM 790 (951)
T KOG0207|consen 722 DQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVG----IDNVYA-EVLPEQK--AEKIKEIQK----NGGPVAM 790 (951)
T ss_pred cccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhC----cceEEe-ccCchhh--HHHHHHHHh----cCCcEEE
Confidence 4788999999999999999999999999999999999999 444433 3322222 344444443 3467999
Q ss_pred EcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEE--cCchhhhHHH
Q 043738 282 FGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV--RHLDELSVVD 328 (368)
Q Consensus 282 IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv--~sl~eL~~~~ 328 (368)
|||+.||-.+.-.+.++..+..+ ..-....||++. +++.+++...
T Consensus 791 VGDGINDaPALA~AdVGIaig~g--s~vAieaADIVLmrn~L~~v~~ai 837 (951)
T KOG0207|consen 791 VGDGINDAPALAQADVGIAIGAG--SDVAIEAADIVLMRNDLRDVPFAI 837 (951)
T ss_pred EeCCCCccHHHHhhccceeeccc--cHHHHhhCCEEEEccchhhhHHHH
Confidence 99999999999888876544333 333444588777 5566665544
No 175
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=97.40 E-value=0.00028 Score=78.45 Aligned_cols=126 Identities=13% Similarity=0.161 Sum_probs=83.1
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcccccc----------------------------------
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFT---------------------------------- 247 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd---------------------------------- 247 (368)
.++.+|+.+.++.|++.|++++++||-....+.......|+-..-.
T Consensus 630 D~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 709 (1057)
T TIGR01652 630 DKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNL 709 (1057)
T ss_pred hhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhh
Confidence 3889999999999999999999999998888888877776532111
Q ss_pred -------EEEeCCCCC----------------------CCCCCHHHHHHHHHHcCCC-CCcEEEEcCCHhhHHHHHHcCC
Q 043738 248 -------AIVAAEDVH----------------------RGKPDPEMFVYAAQLLKFI-PERCIVFGNSNQTVEAAHDARM 297 (368)
Q Consensus 248 -------~iv~~e~v~----------------------~~KP~~~~~~~~le~lgi~-p~~~l~IGDs~nDl~~A~~aG~ 297 (368)
.++.++... ..+-.|.--..+.+.+.-. ...++++|||.||+.|.++|.+
T Consensus 710 ~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdV 789 (1057)
T TIGR01652 710 GDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADV 789 (1057)
T ss_pred ccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCe
Confidence 133332110 0011111111222222222 4679999999999999999987
Q ss_pred eEEEEcCCCCccccCCCcEEEcCchhhhHHH
Q 043738 298 KCVAVASKHPVYELGAADLVVRHLDELSVVD 328 (368)
Q Consensus 298 ~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~ 328 (368)
++ ++.+.........||+++.++..|...+
T Consensus 790 GI-gi~g~eg~qA~~aaD~~i~~F~~L~~ll 819 (1057)
T TIGR01652 790 GV-GISGKEGMQAVMASDFAIGQFRFLTKLL 819 (1057)
T ss_pred ee-EecChHHHHHHHhhhhhhhhHHHHHHHH
Confidence 64 5555443223345999999988887665
No 176
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=97.40 E-value=0.00062 Score=75.18 Aligned_cols=125 Identities=14% Similarity=0.092 Sum_probs=84.2
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccc------------------------cEEEeCCCCC--
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYF------------------------TAIVAAEDVH-- 256 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~F------------------------d~iv~~e~v~-- 256 (368)
++.+++.+.++.|++.|++++++|+.....+....+.+|+..-- ..++++.+..
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l 647 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDM 647 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhC
Confidence 77899999999999999999999999999999999999884210 1244443221
Q ss_pred ----------------CCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcC
Q 043738 257 ----------------RGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRH 320 (368)
Q Consensus 257 ----------------~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~s 320 (368)
...-.|+--..+.+.++-.-.-+.++||+.||+.|.++|.++..+-..+.+ .....||+++.+
T Consensus 648 ~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~-vak~aADivL~d 726 (997)
T TIGR01106 648 TSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSD-VSKQAADMILLD 726 (997)
T ss_pred CHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccH-HHHHhhceEEec
Confidence 122223333333333433345799999999999999999976555212222 123358998865
Q ss_pred --chhhhHHH
Q 043738 321 --LDELSVVD 328 (368)
Q Consensus 321 --l~eL~~~~ 328 (368)
|.-+...+
T Consensus 727 d~f~~Iv~ai 736 (997)
T TIGR01106 727 DNFASIVTGV 736 (997)
T ss_pred CCHHHHHHHH
Confidence 66665543
No 177
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=97.35 E-value=0.0011 Score=66.34 Aligned_cols=102 Identities=10% Similarity=0.137 Sum_probs=70.0
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHc---------CccccccEEEeCCC-----------------C
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSI---------GIEEYFTAIVAAED-----------------V 255 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~---------gl~~~Fd~iv~~e~-----------------v 255 (368)
+...|.+..+|+.|++.|.++.++||++-.++...+..+ .+.++||.||+... .
T Consensus 182 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~ 261 (448)
T PF05761_consen 182 IHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTET 261 (448)
T ss_dssp EE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTT
T ss_pred ccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCC
Confidence 455788999999999999999999999999999988854 36789999887531 0
Q ss_pred CCCCCC-------------HHHHHHHHHHcCCCCCcEEEEcCCH-hhHHHHHHc-CCeEEEEc
Q 043738 256 HRGKPD-------------PEMFVYAAQLLKFIPERCIVFGNSN-QTVEAAHDA-RMKCVAVA 303 (368)
Q Consensus 256 ~~~KP~-------------~~~~~~~le~lgi~p~~~l~IGDs~-nDl~~A~~a-G~~~I~v~ 303 (368)
+..+.. .--...+.+.+|....++++|||+. .||-..++. |+.+++|-
T Consensus 262 g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii 324 (448)
T PF05761_consen 262 GKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAII 324 (448)
T ss_dssp SSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-
T ss_pred CccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEe
Confidence 110000 1125577778899899999999999 797766665 99999975
No 178
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=97.34 E-value=0.0017 Score=58.84 Aligned_cols=82 Identities=11% Similarity=0.121 Sum_probs=58.8
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHH----HHHHHHHcCcccccc-EEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKT----LETAIDSIGIEEYFT-AIVAAEDVHRGKPDPEMFVYAAQLLKFIP 276 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~----~~~~l~~~gl~~~Fd-~iv~~e~v~~~KP~~~~~~~~le~lgi~p 276 (368)
..+.||+.+|++..-++|..|..+||..... +..-|...|+...-. .++.- ...+++..-+..+-+ ..
T Consensus 121 sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~llk---k~~k~Ke~R~~~v~k----~~ 193 (274)
T COG2503 121 SKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHLLLK---KDKKSKEVRRQAVEK----DY 193 (274)
T ss_pred cccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccceEEe---eCCCcHHHHHHHHhh----cc
Confidence 4788999999999999999999999987665 345566777775443 33333 234555555555555 45
Q ss_pred CcEEEEcCCHhhHH
Q 043738 277 ERCIVFGNSNQTVE 290 (368)
Q Consensus 277 ~~~l~IGDs~nDl~ 290 (368)
.-++.|||..+|..
T Consensus 194 ~iVm~vGDNl~DF~ 207 (274)
T COG2503 194 KIVMLVGDNLDDFG 207 (274)
T ss_pred ceeeEecCchhhhc
Confidence 67899999998753
No 179
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=97.33 E-value=0.00044 Score=63.90 Aligned_cols=71 Identities=11% Similarity=-0.084 Sum_probs=55.0
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHc-------CCeEEEEcCCCCccccCCCcEEEcCchhhhHHHHh
Q 043738 258 GKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDA-------RMKCVAVASKHPVYELGAADLVVRHLDELSVVDLK 330 (368)
Q Consensus 258 ~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~a-------G~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~l~ 330 (368)
+..|...+..+++++++.+..+++|||+.||+.|++.+ |..+|.+..+. ....|++++++..++.. .|+
T Consensus 165 ~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~---~~~~A~~~~~~~~~v~~-~L~ 240 (244)
T TIGR00685 165 FVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS---KKTVAKFHLTGPQQVLE-FLG 240 (244)
T ss_pred CCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC---cCCCceEeCCCHHHHHH-HHH
Confidence 33457999999999999999999999999999999998 66666665232 12348999999999743 344
Q ss_pred cc
Q 043738 331 NL 332 (368)
Q Consensus 331 ~L 332 (368)
.|
T Consensus 241 ~l 242 (244)
T TIGR00685 241 LL 242 (244)
T ss_pred HH
Confidence 44
No 180
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=97.28 E-value=0.00032 Score=62.70 Aligned_cols=47 Identities=15% Similarity=0.130 Sum_probs=43.1
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEE
Q 043738 255 VHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVA 301 (368)
Q Consensus 255 v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~ 301 (368)
.+.+.+|+..++.++++++++++++++|||+.||+.|++.+|+.+++
T Consensus 158 ~p~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 158 LPAGVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred ecCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 46688899999999999999999999999999999999999987653
No 181
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=97.23 E-value=0.0015 Score=71.39 Aligned_cols=102 Identities=15% Similarity=0.109 Sum_probs=77.6
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccc--cEEEeCCCCC----------------CCCCCHH
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYF--TAIVAAEDVH----------------RGKPDPE 263 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~F--d~iv~~e~v~----------------~~KP~~~ 263 (368)
.++.+++++.++.|++.|+++.++||-+......+.+.+|+..-- +.++++.+.. ..+-.|+
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~ 625 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPE 625 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHH
Confidence 589999999999999999999999999999999999999976544 3366654321 1122234
Q ss_pred HHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEc
Q 043738 264 MFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVA 303 (368)
Q Consensus 264 ~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~ 303 (368)
--..+.+.++-.-.-+.+.|||.||..|.++|.+++.+..
T Consensus 626 qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~ 665 (917)
T COG0474 626 QKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGG 665 (917)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecc
Confidence 4444444444445779999999999999999998765644
No 182
>PLN03190 aminophospholipid translocase; Provisional
Probab=97.19 E-value=0.00055 Score=76.38 Aligned_cols=52 Identities=13% Similarity=0.193 Sum_probs=42.2
Q ss_pred CcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchhhhHHHH
Q 043738 277 ERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDELSVVDL 329 (368)
Q Consensus 277 ~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~l 329 (368)
.-+++||||.||+.|.++|.+++ ++.|.........+|+.+..|..|..+++
T Consensus 872 ~vtlaIGDGaNDv~mIq~AdVGI-GIsG~EG~qA~~aSDfaI~~Fr~L~rLLl 923 (1178)
T PLN03190 872 DMTLAIGDGANDVSMIQMADVGV-GISGQEGRQAVMASDFAMGQFRFLVPLLL 923 (1178)
T ss_pred cEEEEECCCcchHHHHHhcCeee-eecCchhHHHHHhhccchhhhHHHHHHHH
Confidence 56899999999999999998764 66666554455569999999999877765
No 183
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=97.19 E-value=0.0013 Score=68.83 Aligned_cols=125 Identities=14% Similarity=0.169 Sum_probs=87.3
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcccccc----EEEeCCCCCC----------------CCCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFT----AIVAAEDVHR----------------GKPD 261 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd----~iv~~e~v~~----------------~KP~ 261 (368)
.+|++++++.++.|++.|+++.++|+-.......+.++.|+...-+ ..+++.++.. ..-.
T Consensus 583 DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~ 662 (972)
T KOG0202|consen 583 DPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAE 662 (972)
T ss_pred CCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecC
Confidence 4889999999999999999999999999999999999999765544 3444433211 1223
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEE--cCchhhhHH
Q 043738 262 PEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV--RHLDELSVV 327 (368)
Q Consensus 262 ~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv--~sl~eL~~~ 327 (368)
|..-..+.+.|+-.-+-+.+-||+.||-.+.+.|.++..|--.+... ...++|.|. ++|+-+...
T Consensus 663 P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdV-aKeAsDMVL~DDnFstIvaA 729 (972)
T KOG0202|consen 663 PQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDV-AKEASDMVLADDNFSTIVAA 729 (972)
T ss_pred chhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHh-hHhhhhcEEecCcHHHHHHH
Confidence 44445555555555688999999999999999999876663222221 122466666 455555443
No 184
>COG4996 Predicted phosphatase [General function prediction only]
Probab=97.10 E-value=0.0017 Score=53.27 Aligned_cols=84 Identities=15% Similarity=0.114 Sum_probs=65.5
Q ss_pred ccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHH------cCC
Q 043738 201 IYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQL------LKF 274 (368)
Q Consensus 201 ~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~------lgi 274 (368)
.+.++|.++++++++++.|+-+..+|=......-..+..+++..||+.++..---.+ -.++-+++.. ..+
T Consensus 39 ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~~yFhy~ViePhP~K----~~ML~~llr~i~~er~~~i 114 (164)
T COG4996 39 EVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLLQYFHYIVIEPHPYK----FLMLSQLLREINTERNQKI 114 (164)
T ss_pred EEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchhhhEEEEEecCCChh----HHHHHHHHHHHHHhhcccc
Confidence 378999999999999999999999999888888899999999999998876422111 2233333333 246
Q ss_pred CCCcEEEEcCCHhh
Q 043738 275 IPERCIVFGNSNQT 288 (368)
Q Consensus 275 ~p~~~l~IGDs~nD 288 (368)
.|++++|++|..--
T Consensus 115 kP~~Ivy~DDR~iH 128 (164)
T COG4996 115 KPSEIVYLDDRRIH 128 (164)
T ss_pred CcceEEEEeccccc
Confidence 89999999997743
No 185
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=97.09 E-value=0.0039 Score=49.52 Aligned_cols=85 Identities=13% Similarity=0.137 Sum_probs=57.3
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChH---HHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRK---TLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPER 278 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~---~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~ 278 (368)
..++||+.++|+.|+++|++++++||.... .....++.+|+.--.+.|+++. ......+++. .....
T Consensus 13 ~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ts~---------~~~~~~l~~~-~~~~~ 82 (101)
T PF13344_consen 13 NEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIITSG---------MAAAEYLKEH-KGGKK 82 (101)
T ss_dssp TEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEEHH---------HHHHHHHHHH-TTSSE
T ss_pred CCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEChH---------HHHHHHHHhc-CCCCE
Confidence 378999999999999999999999998644 4445567788886567777773 3344444442 33577
Q ss_pred EEEEcCCHhhHHHHHHcCC
Q 043738 279 CIVFGNSNQTVEAAHDARM 297 (368)
Q Consensus 279 ~l~IGDs~nDl~~A~~aG~ 297 (368)
++++|-. ...+.++++|+
T Consensus 83 v~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 83 VYVLGSD-GLREELREAGF 100 (101)
T ss_dssp EEEES-H-HHHHHHHHTTE
T ss_pred EEEEcCH-HHHHHHHHcCC
Confidence 8888865 55666677764
No 186
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=96.99 E-value=0.0024 Score=54.64 Aligned_cols=95 Identities=12% Similarity=0.058 Sum_probs=59.3
Q ss_pred CccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcc-ccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEc
Q 043738 205 RTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIE-EYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFG 283 (368)
Q Consensus 205 ~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~-~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IG 283 (368)
..++...|..++++ .+++.+|.......+..-..+... ..+|.+...+- ..| ..+.+..+++ +++.
T Consensus 74 ~q~v~~~L~~~~e~-~~L~~itar~~dl~~iT~~~l~~q~ih~~~l~i~g~--h~K------V~~vrth~id----lf~e 140 (194)
T COG5663 74 AQLVKQVLPSLKEE-HRLIYITARKADLTRITYAWLFIQNIHYDHLEIVGL--HHK------VEAVRTHNID----LFFE 140 (194)
T ss_pred HHHHHHHhHHHHhh-ceeeeeehhhHHHHHHHHHHHHHhccchhhhhhhcc--ccc------chhhHhhccC----cccc
Confidence 34566777778776 678888876554443333332222 12443322221 122 3445566665 8999
Q ss_pred CCH-hhHHHHHHcCCeEEEEcCCCCccccC
Q 043738 284 NSN-QTVEAAHDARMKCVAVASKHPVYELG 312 (368)
Q Consensus 284 Ds~-nDl~~A~~aG~~~I~v~~~~~~~~~~ 312 (368)
|+. |-.+.|+++|++++.++....+....
T Consensus 141 d~~~na~~iAk~~~~~vilins~ynRkp~~ 170 (194)
T COG5663 141 DSHDNAGQIAKNAGIPVILINSPYNRKPAA 170 (194)
T ss_pred ccCchHHHHHHhcCCcEEEecCcccccchH
Confidence 998 77888899999999999877766543
No 187
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=96.98 E-value=0.0065 Score=52.09 Aligned_cols=92 Identities=16% Similarity=0.188 Sum_probs=56.5
Q ss_pred cCccHHHHHHHHHhCCCcEEEEcCCChH---HHHHHHHHc---CccccccE-EEeC-C--------CCCCCCCCHHHHHH
Q 043738 204 LRTGSKEFVNILMHYKIPMALVSTHPRK---TLETAIDSI---GIEEYFTA-IVAA-E--------DVHRGKPDPEMFVY 267 (368)
Q Consensus 204 ~~pg~~elL~~Lk~~Gi~vaivSn~~~~---~~~~~l~~~---gl~~~Fd~-iv~~-e--------~v~~~KP~~~~~~~ 267 (368)
..+|+.++++.++++|+++.-+|..+-. .++.++... |. .+-+. ++.+ + ++-.. +++.|+.
T Consensus 28 ~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~-~lP~Gpv~~sP~~l~~al~rEvi~~--~p~~fK~ 104 (157)
T PF08235_consen 28 THPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGH-NLPDGPVLLSPDSLFSALHREVISK--DPEEFKI 104 (157)
T ss_pred hhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCc-cCCCCCEEECCcchhhhhhcccccc--ChHHHHH
Confidence 3478999999999999999999998644 344555544 11 11121 2222 1 22222 3444442
Q ss_pred -----HHHHcC-CCCCcEEEEcCCHhhHHHHHHcCCe
Q 043738 268 -----AAQLLK-FIPERCIVFGNSNQTVEAAHDARMK 298 (368)
Q Consensus 268 -----~le~lg-i~p~~~l~IGDs~nDl~~A~~aG~~ 298 (368)
+...+. ....=...+|+..+|+.+=.++|+.
T Consensus 105 ~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 105 ACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred HHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 222222 1223356789999999999999987
No 188
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=96.98 E-value=0.0051 Score=62.89 Aligned_cols=97 Identities=21% Similarity=0.213 Sum_probs=73.6
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVF 282 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~I 282 (368)
.+.+++.+.++.|++.|++++++|+..........+.+|+ + + .-.|+-...+.+.+.-....+.++
T Consensus 347 ~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi-------~-~------~~~p~~K~~~v~~l~~~g~~v~~v 412 (499)
T TIGR01494 347 PLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI-------F-A------RVTPEEKAALVEALQKKGRVVAMT 412 (499)
T ss_pred CCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc-------e-e------ccCHHHHHHHHHHHHHCCCEEEEE
Confidence 7889999999999999999999999999999999999986 1 1 122333344444443334779999
Q ss_pred cCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcC
Q 043738 283 GNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRH 320 (368)
Q Consensus 283 GDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~s 320 (368)
||+.||..+...+++...+ . ....||.++.+
T Consensus 413 GDg~nD~~al~~Advgia~-~------a~~~adivl~~ 443 (499)
T TIGR01494 413 GDGVNDAPALKKADVGIAM-G------AKAAADIVLLD 443 (499)
T ss_pred CCChhhHHHHHhCCCcccc-c------hHHhCCeEEec
Confidence 9999999999999876443 1 23348888865
No 189
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=96.81 E-value=0.0068 Score=50.15 Aligned_cols=49 Identities=6% Similarity=0.053 Sum_probs=35.5
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChH---------------HHHHHHHHcCccccccEEEeCC
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRK---------------TLETAIDSIGIEEYFTAIVAAE 253 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~---------------~~~~~l~~~gl~~~Fd~iv~~e 253 (368)
.+.+++.+.|+.+++.|+.++++|+.+.. .+..++.+.++. +|.++.+-
T Consensus 24 ~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ip--Yd~l~~~k 87 (126)
T TIGR01689 24 APILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNVP--YDEIYVGK 87 (126)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCCC--CceEEeCC
Confidence 34556778889999999999999998654 445666677766 56665543
No 190
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=96.63 E-value=0.014 Score=64.94 Aligned_cols=42 Identities=19% Similarity=0.213 Sum_probs=39.1
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcc
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIE 243 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~ 243 (368)
.++.|++.+.++.|++.|++++++||.+...+....+.+|+-
T Consensus 655 d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii 696 (1054)
T TIGR01657 655 NPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIV 696 (1054)
T ss_pred cCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence 378999999999999999999999999999999999999984
No 191
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=96.52 E-value=0.016 Score=51.69 Aligned_cols=84 Identities=17% Similarity=0.208 Sum_probs=56.0
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcccc--c--cEEEeCC--------CCC--CCCCCHHHHHH
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEY--F--TAIVAAE--------DVH--RGKPDPEMFVY 267 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~--F--d~iv~~e--------~v~--~~KP~~~~~~~ 267 (368)
....|++.+||+.+.+. +.|+|.|.+....+..++..+++... + ..+.... ..+ .-|+ +..
T Consensus 44 ~~kRP~l~eFL~~~~~~-feIvVwTAa~~~ya~~~l~~l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKd----L~~ 118 (195)
T TIGR02245 44 ELMRPYLHEFLTSAYED-YDIVIWSATSMKWIEIKMTELGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKP----LGV 118 (195)
T ss_pred EEeCCCHHHHHHHHHhC-CEEEEEecCCHHHHHHHHHHhcccCCccceEEEEeccccceeeEeeccCcEEEee----cHH
Confidence 36689999999999996 99999999999999999998875321 1 1111111 011 1222 222
Q ss_pred HHHHcC--CCCCcEEEEcCCHhhHH
Q 043738 268 AAQLLK--FIPERCIVFGNSNQTVE 290 (368)
Q Consensus 268 ~le~lg--i~p~~~l~IGDs~nDl~ 290 (368)
+-.+++ .+.+++|.|+|+..-..
T Consensus 119 lw~~l~~~~~~~ntiiVDd~p~~~~ 143 (195)
T TIGR02245 119 IWALLPEFYSMKNTIMFDDLRRNFL 143 (195)
T ss_pred hhhhcccCCCcccEEEEeCCHHHHh
Confidence 223444 37799999999996543
No 192
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=96.52 E-value=0.011 Score=55.11 Aligned_cols=48 Identities=17% Similarity=0.259 Sum_probs=43.0
Q ss_pred ccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCC
Q 043738 206 TGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAE 253 (368)
Q Consensus 206 pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e 253 (368)
|.+.+-|.+|++.|.-+++-|.|.++++...++.+++..+||.++++.
T Consensus 145 ~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~~G 192 (297)
T PF05152_consen 145 PAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKLEGYFDIIICGG 192 (297)
T ss_pred hHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCCccccEEEEeCC
Confidence 445577889999999999999999999999999999999999999864
No 193
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.44 E-value=0.0084 Score=58.94 Aligned_cols=101 Identities=16% Similarity=0.172 Sum_probs=87.2
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCC--ChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTH--PRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERC 279 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~--~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~ 279 (368)
+.+.....++.+.+.+.|.+|+++|.. +...++..+...|.+.+---++.+.+....|-....|..+++..++++...
T Consensus 98 Lypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~d~~nipiY~S~e~rl~KnSg~LFk~Vlk~EnVd~~~w 177 (635)
T COG5610 98 LYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGPDFNNIPIYMSSEFRLKKNSGNLFKAVLKLENVDPKKW 177 (635)
T ss_pred eeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCCCccCceeeecceeehhcccchHHHHHHhhcCCChhhe
Confidence 355566788999999999999999996 667788888888877554557888888888999999999999999999999
Q ss_pred EEEcCCH-hhHHHHHHcCCeEEEE
Q 043738 280 IVFGNSN-QTVEAAHDARMKCVAV 302 (368)
Q Consensus 280 l~IGDs~-nDl~~A~~aG~~~I~v 302 (368)
+.+||.- .|..++.+.|+.+...
T Consensus 178 ~H~GDN~~aD~l~pk~LgI~Tlf~ 201 (635)
T COG5610 178 IHCGDNWVADYLKPKNLGISTLFY 201 (635)
T ss_pred EEecCchhhhhcCccccchhHHHH
Confidence 9999988 7999999999987653
No 194
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=96.18 E-value=0.047 Score=51.43 Aligned_cols=88 Identities=13% Similarity=0.155 Sum_probs=61.5
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChH---HHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRK---TLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERC 279 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~---~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~ 279 (368)
.++||+.++|+.|++.|++++++||+... .....++.+|+....+.++++. ......+++......++
T Consensus 18 ~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~ts~---------~~~~~~l~~~~~~~~~v 88 (279)
T TIGR01452 18 RVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFSSA---------LCAARLLRQPPDAPKAV 88 (279)
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEecHH---------HHHHHHHHhhCcCCCEE
Confidence 46789999999999999999999996533 3345667788875556666653 34445555544445789
Q ss_pred EEEcCCHhhHHHHHHcCCeEE
Q 043738 280 IVFGNSNQTVEAAHDARMKCV 300 (368)
Q Consensus 280 l~IGDs~nDl~~A~~aG~~~I 300 (368)
+++|+. ...+.++..|+..+
T Consensus 89 ~~iG~~-~~~~~l~~~g~~~~ 108 (279)
T TIGR01452 89 YVIGEE-GLRAELDAAGIRLA 108 (279)
T ss_pred EEEcCH-HHHHHHHHCCCEEe
Confidence 999985 23455677787654
No 195
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=95.97 E-value=0.019 Score=54.66 Aligned_cols=101 Identities=11% Similarity=0.172 Sum_probs=73.1
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHc---CccccccEEEeCCCCC-----CCCCC-------------
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSI---GIEEYFTAIVAAEDVH-----RGKPD------------- 261 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~---gl~~~Fd~iv~~e~v~-----~~KP~------------- 261 (368)
.-.|....+|+.|+++|.++.++||++-.++..-+..+ .+.++||.|+.-.+-+ ..+|-
T Consensus 240 ~r~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~wd 319 (510)
T KOG2470|consen 240 ERNPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLWD 319 (510)
T ss_pred hccHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhhh
Confidence 34567888999999999999999999998887766654 4667899876532100 01110
Q ss_pred ------------HHHHHHHHHHcCCCCCcEEEEcCCH-hhHHHHH-HcCCeEEEEc
Q 043738 262 ------------PEMFVYAAQLLKFIPERCIVFGNSN-QTVEAAH-DARMKCVAVA 303 (368)
Q Consensus 262 ------------~~~~~~~le~lgi~p~~~l~IGDs~-nDl~~A~-~aG~~~I~v~ 303 (368)
...+...++.-|..-.++++|||.. +|+.... +.|+.+-++-
T Consensus 320 kv~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAII 375 (510)
T KOG2470|consen 320 KVDKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAII 375 (510)
T ss_pred hhhhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccch
Confidence 1124566777788889999999999 8987776 8898876653
No 196
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=95.85 E-value=0.068 Score=50.04 Aligned_cols=141 Identities=17% Similarity=0.185 Sum_probs=81.0
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHH---HHHHHH-cCccccccEEEeCCCC-----CCCCC-------CHHHHH
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTL---ETAIDS-IGIEEYFTAIVAAEDV-----HRGKP-------DPEMFV 266 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~---~~~l~~-~gl~~~Fd~iv~~e~v-----~~~KP-------~~~~~~ 266 (368)
.++||+.++|+.|+++|++++++||+++..- ...++. .+++...+.|+++... ...+| -.+.+.
T Consensus 24 ~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~~at~~~l~~~~~~~kv~viG~~~l~ 103 (269)
T COG0647 24 EAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSGDATADYLAKQKPGKKVYVIGEEGLK 103 (269)
T ss_pred ccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHHHHHHHHHHhhCCCCEEEEECCcchH
Confidence 7889999999999999999999999865543 345555 5666677888887431 11111 124466
Q ss_pred HHHHHcCCC----C-C---cEEEEcCCH----hhHHH---HHHcCCeEEEEcCCCCccccCCCcEEEcCchhhhHHHHhc
Q 043738 267 YAAQLLKFI----P-E---RCIVFGNSN----QTVEA---AHDARMKCVAVASKHPVYELGAADLVVRHLDELSVVDLKN 331 (368)
Q Consensus 267 ~~le~lgi~----p-~---~~l~IGDs~----nDl~~---A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~l~~ 331 (368)
..++.+|+. . . .++.+|... .++.. +...|+.+|+.+....... .+-.++..-.+ ...+++
T Consensus 104 ~~l~~~G~~~~~~~~~~~~d~Vv~g~d~~~~~e~l~~a~~~i~~g~~fI~tNpD~~~p~---~~g~~pgaGai-~~~~~~ 179 (269)
T COG0647 104 EELEGAGFELVDEEEPARVDAVVVGLDRTLTYEKLAEALLAIAAGAPFIATNPDLTVPT---ERGLRPGAGAI-AALLEQ 179 (269)
T ss_pred HHHHhCCcEEeccCCCCcccEEEEecCCCCCHHHHHHHHHHHHcCCcEEEeCCCccccC---CCCCccCcHHH-HHHHHH
Confidence 677776641 1 1 466777432 23222 2234777777663322211 11222333334 334555
Q ss_pred cccccccccCCCCCCc
Q 043738 332 LADIESTEFGSVEPEM 347 (368)
Q Consensus 332 L~d~~~~~~~~~~~~~ 347 (368)
+..-++.-.|-|.|+.
T Consensus 180 ~tg~~~~~~GKP~~~i 195 (269)
T COG0647 180 ATGREPTVIGKPSPAI 195 (269)
T ss_pred hhCCcccccCCCCHHH
Confidence 5555665667666553
No 197
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=95.79 E-value=0.022 Score=52.89 Aligned_cols=36 Identities=22% Similarity=0.384 Sum_probs=31.2
Q ss_pred HHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccc
Q 043738 209 KEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEE 244 (368)
Q Consensus 209 ~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~ 244 (368)
.+.++.++++|++++++|+.+...+...++.+|+..
T Consensus 22 ~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~ 57 (256)
T TIGR01486 22 KEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLED 57 (256)
T ss_pred HHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC
Confidence 467778888999999999999999999999998753
No 198
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=95.51 E-value=0.044 Score=60.48 Aligned_cols=49 Identities=12% Similarity=0.302 Sum_probs=35.1
Q ss_pred CCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchhh
Q 043738 275 IPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDEL 324 (368)
Q Consensus 275 ~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL 324 (368)
.+..+++|||+.||+.|.+.|.++ |+|.|.........+|+-+.-+.=|
T Consensus 793 ~~~~TLAIGDGANDVsMIQ~AhVG-VGIsG~EGmQAvmsSD~AIaqFrfL 841 (1151)
T KOG0206|consen 793 LKAVTLAIGDGANDVSMIQEAHVG-VGISGQEGMQAVMSSDFAIAQFRFL 841 (1151)
T ss_pred CCceEEEeeCCCccchheeeCCcC-eeeccchhhhhhhcccchHHHHHHH
Confidence 456799999999999999998765 5666665554444577765554433
No 199
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=95.41 E-value=0.028 Score=56.35 Aligned_cols=91 Identities=13% Similarity=0.151 Sum_probs=72.1
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVF 282 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~I 282 (368)
.+.||++|-+.+|++.|++.+.+|+.++-....+.+..|++++... .+ |+--..+.++.+-.-.=+.+.
T Consensus 447 ivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDdfiAe---------at--PEdK~~~I~~eQ~~grlVAMt 515 (681)
T COG2216 447 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFIAE---------AT--PEDKLALIRQEQAEGRLVAMT 515 (681)
T ss_pred hcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchhhhhc---------CC--hHHHHHHHHHHHhcCcEEEEc
Confidence 5679999999999999999999999999999999999999876533 22 344445555555566678999
Q ss_pred cCCHhhHHHHHHcCCeEEEEcC
Q 043738 283 GNSNQTVEAAHDARMKCVAVAS 304 (368)
Q Consensus 283 GDs~nDl~~A~~aG~~~I~v~~ 304 (368)
||+.||..+..++.....|-++
T Consensus 516 GDGTNDAPALAqAdVg~AMNsG 537 (681)
T COG2216 516 GDGTNDAPALAQADVGVAMNSG 537 (681)
T ss_pred CCCCCcchhhhhcchhhhhccc
Confidence 9999999999999876555433
No 200
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=95.37 E-value=0.97 Score=43.85 Aligned_cols=79 Identities=18% Similarity=0.198 Sum_probs=57.3
Q ss_pred EEEEcCCChH--HHHHHHHHcCccccc--cEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCC
Q 043738 222 MALVSTHPRK--TLETAIDSIGIEEYF--TAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARM 297 (368)
Q Consensus 222 vaivSn~~~~--~~~~~l~~~gl~~~F--d~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~ 297 (368)
-++||+..-. .++.+| +||...| +.|+++..+++ ...|+++.++||- .-.-++|||+.-.-.+|++..|
T Consensus 373 nVlvTttqLipalaKvLL--~gLg~~fpiENIYSa~kiGK----escFerI~~RFg~-K~~yvvIgdG~eee~aAK~ln~ 445 (468)
T KOG3107|consen 373 NVLVTTTQLIPALAKVLL--YGLGSSFPIENIYSATKIGK----ESCFERIQSRFGR-KVVYVVIGDGVEEEQAAKALNM 445 (468)
T ss_pred EEEEeccchhHHHHHHHH--HhcCCcccchhhhhhhhccH----HHHHHHHHHHhCC-ceEEEEecCcHHHHHHHHhhCC
Confidence 4667765322 222333 3555555 57888776643 7899999999998 6778999999999999999999
Q ss_pred eEEEEcCCCC
Q 043738 298 KCVAVASKHP 307 (368)
Q Consensus 298 ~~I~v~~~~~ 307 (368)
.+.-++....
T Consensus 446 PfwrI~~h~D 455 (468)
T KOG3107|consen 446 PFWRISSHSD 455 (468)
T ss_pred ceEeeccCcc
Confidence 9888875443
No 201
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=95.31 E-value=0.18 Score=42.76 Aligned_cols=95 Identities=15% Similarity=0.055 Sum_probs=55.8
Q ss_pred ccHHHHHHHHHh-CC-CcEEEEcCCChH--------HHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcC-C
Q 043738 206 TGSKEFVNILMH-YK-IPMALVSTHPRK--------TLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLK-F 274 (368)
Q Consensus 206 pg~~elL~~Lk~-~G-i~vaivSn~~~~--------~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lg-i 274 (368)
|....-++++++ .| ..++++||+... ..+.+-.+.|+. +-.....++-...+.+.+....-+ .
T Consensus 64 p~~l~~ie~~~~vygek~i~v~SNsaG~~~~D~d~s~Ak~le~k~gIp------VlRHs~kKP~ct~E~~~y~~~Nshv~ 137 (190)
T KOG2961|consen 64 PPLLPSIERCKAVYGEKDIAVFSNSAGLTEYDHDDSKAKALEAKIGIP------VLRHSVKKPACTAEEVEYHFGNSHVC 137 (190)
T ss_pred chhHHHHHHHHHHhCcccEEEEecCcCccccCCchHHHHHHHHhhCCc------eEeecccCCCccHHHHHHHhCCcccC
Confidence 334444555554 23 678889886221 222333344544 222222222223444444433323 4
Q ss_pred CCCcEEEEcCCH-hhHHHHHHcCCeEEEEcCCC
Q 043738 275 IPERCIVFGNSN-QTVEAAHDARMKCVAVASKH 306 (368)
Q Consensus 275 ~p~~~l~IGDs~-nDl~~A~~aG~~~I~v~~~~ 306 (368)
.+++++||||.. .||-+|...|-..||...+-
T Consensus 138 ~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv 170 (190)
T KOG2961|consen 138 TSSELIMVGDRLFTDIVYANRMGSLGVWTEPGV 170 (190)
T ss_pred ChhHeEEEccchhhhHhhhhhccceeEEecccc
Confidence 789999999999 89999999999999987543
No 202
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=95.17 E-value=0.046 Score=48.62 Aligned_cols=36 Identities=11% Similarity=0.163 Sum_probs=30.0
Q ss_pred ccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcC
Q 043738 206 TGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIG 241 (368)
Q Consensus 206 pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~g 241 (368)
+.+.+.|++|++.|++++++|+.....+..+++.++
T Consensus 20 ~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 20 PETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 345578889999999999999999998888888643
No 203
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=95.10 E-value=0.096 Score=55.50 Aligned_cols=120 Identities=17% Similarity=0.216 Sum_probs=78.4
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcccccc--EEEeCCCCC------------------CCCCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFT--AIVAAEDVH------------------RGKPD 261 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd--~iv~~e~v~------------------~~KP~ 261 (368)
.+.+||+++.++.|++.|+.+-+||+.+-...+.+....|+..-=+ .++.+.++. +.-|.
T Consensus 646 DPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~ 725 (1034)
T KOG0204|consen 646 DPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSPN 725 (1034)
T ss_pred CCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCCCc
Confidence 4889999999999999999999999999999999999999753322 222222211 11121
Q ss_pred -HHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEE-EcCCCCccccCCCcEEE--cCchhhhH
Q 043738 262 -PEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVA-VASKHPVYELGAADLVV--RHLDELSV 326 (368)
Q Consensus 262 -~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~-v~~~~~~~~~~~ad~vv--~sl~eL~~ 326 (368)
...+.+.+.+.| +=+.+-||+.||-.+.++|.++..| +.+..-.+ ..+|.|+ ++|..+..
T Consensus 726 DK~lLVk~L~~~g---~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAK--EaSDIIi~DDNFssIVk 789 (1034)
T KOG0204|consen 726 DKHLLVKGLIKQG---EVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAK--EASDIIILDDNFSSIVK 789 (1034)
T ss_pred hHHHHHHHHHhcC---cEEEEecCCCCCchhhhhcccchhccccchhhhh--hhCCeEEEcCchHHHHH
Confidence 122333333322 3356679999999999999987655 22332222 2478777 45555543
No 204
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=94.93 E-value=0.027 Score=58.14 Aligned_cols=124 Identities=15% Similarity=0.173 Sum_probs=77.7
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCc----------------------------cccccEEEeCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGI----------------------------EEYFTAIVAAE 253 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl----------------------------~~~Fd~iv~~e 253 (368)
.++-.+++..|+.|++.|++++.+||..-+....+.+..++ ......++.++
T Consensus 657 DkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~ 736 (1051)
T KOG0210|consen 657 DKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGE 736 (1051)
T ss_pred HHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCc
Confidence 36677888899999999999999998654444333322211 11111222221
Q ss_pred C---------------------C----CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCc
Q 043738 254 D---------------------V----HRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPV 308 (368)
Q Consensus 254 ~---------------------v----~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~ 308 (368)
. + ..+..|+++.+.+-++-| .++.+|||+-||+.|.++|..+ |++.+....
T Consensus 737 Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~---krvc~IGDGGNDVsMIq~A~~G-iGI~gkEGk 812 (1051)
T KOG0210|consen 737 SLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTG---KRVCAIGDGGNDVSMIQAADVG-IGIVGKEGK 812 (1051)
T ss_pred hHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhC---ceEEEEcCCCccchheeecccc-eeeeccccc
Confidence 0 0 112233455555555555 7899999999999999988654 455555554
Q ss_pred cccCCCcEEEcCchhhhHHHH
Q 043738 309 YELGAADLVVRHLDELSVVDL 329 (368)
Q Consensus 309 ~~~~~ad~vv~sl~eL~~~~l 329 (368)
..--+||+-|.-|..+...++
T Consensus 813 QASLAADfSItqF~Hv~rLLl 833 (1051)
T KOG0210|consen 813 QASLAADFSITQFSHVSRLLL 833 (1051)
T ss_pred ccchhccccHHHHHHHHHHhh
Confidence 444569998888887766554
No 205
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=94.89 E-value=0.22 Score=50.36 Aligned_cols=76 Identities=12% Similarity=0.083 Sum_probs=46.1
Q ss_pred HHHHHHhCCCcEEEEcCCChHHHHHHHHH-cCcccccc--------EEEeCCCCCCCCCCHHH-HHHHHHHcCCCCCcEE
Q 043738 211 FVNILMHYKIPMALVSTHPRKTLETAIDS-IGIEEYFT--------AIVAAEDVHRGKPDPEM-FVYAAQLLKFIPERCI 280 (368)
Q Consensus 211 lL~~Lk~~Gi~vaivSn~~~~~~~~~l~~-~gl~~~Fd--------~iv~~e~v~~~KP~~~~-~~~~le~lgi~p~~~l 280 (368)
.++..++.| +++++|..+..+++..++. +|.+...- ..+++--. ++...+. ...+.+.+|- ....+
T Consensus 101 ~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~D~VvGTEL~v~~~G~~TG~~~--G~n~~ek~~~rl~~~~g~-~~~~v 176 (498)
T PLN02499 101 AWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRADEVIGSELVVNRFGFATGFIR--GTDVDQSVANRVANLFVD-ERPQL 176 (498)
T ss_pred HHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCCceEEeeeEEEeeccEEEEEEe--cCccHHHHHHHHHHHhCc-cCcee
Confidence 566677788 9999999999999999997 77543210 22222111 2222333 4455555663 24477
Q ss_pred EEcCCHhhHH
Q 043738 281 VFGNSNQTVE 290 (368)
Q Consensus 281 ~IGDs~nDl~ 290 (368)
-+||+..|-.
T Consensus 177 g~~~~~~~~~ 186 (498)
T PLN02499 177 GLGRISASSS 186 (498)
T ss_pred cccCCcccch
Confidence 8888775533
No 206
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=94.58 E-value=0.35 Score=44.75 Aligned_cols=140 Identities=14% Similarity=0.166 Sum_probs=79.7
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcC---CChHHHHHHHHHcCccccccEEEeCCCC-----CCCCCC-------HHHHHH
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVST---HPRKTLETAIDSIGIEEYFTAIVAAEDV-----HRGKPD-------PEMFVY 267 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn---~~~~~~~~~l~~~gl~~~Fd~iv~~e~v-----~~~KP~-------~~~~~~ 267 (368)
.+.|++.++|+.|+++|++++++|| .....+...++.+|+....+.|+++... ...++. ...+..
T Consensus 17 ~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~~~~~~~l~~~~~~~~v~~lg~~~l~~ 96 (249)
T TIGR01457 17 ERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTASMATADYMNDLKLEKTVYVIGEEGLKE 96 (249)
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHHHHHHHHHHhcCCCCEEEEEcChhHHH
Confidence 3457899999999999999999998 4566777788889988777778876321 000111 134666
Q ss_pred HHHHcCCC----CCcEEEEcCC-H---hhHHHHH---HcCCeEEEEcCCCCccccCCCcEEEcCchhhhHHHHhcccccc
Q 043738 268 AAQLLKFI----PERCIVFGNS-N---QTVEAAH---DARMKCVAVASKHPVYELGAADLVVRHLDELSVVDLKNLADIE 336 (368)
Q Consensus 268 ~le~lgi~----p~~~l~IGDs-~---nDl~~A~---~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~l~~L~d~~ 336 (368)
.++..|+. ..+.|++|.. . .++..|. +.|+..+..+....... .+-.+.....+... +.....-+
T Consensus 97 ~l~~~g~~~~~~~~~~Vvvg~~~~~~y~~l~~a~~~l~~g~~~i~tN~D~~~~~---~~~~~~~~G~~~~~-i~~~~~~~ 172 (249)
T TIGR01457 97 AIKEAGYVEDKEKPDYVVVGLDRQIDYEKFATATLAIRKGAHFIGTNGDLAIPT---ERGLLPGNGSLITV-LEVATGVK 172 (249)
T ss_pred HHHHcCCEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCeEEEECCCCCCCC---CCCCCCCcHHHHHH-HHHHhCCC
Confidence 77776753 2355777643 2 2333222 45888666553332221 11123344444322 33323334
Q ss_pred ccccCCCCCC
Q 043738 337 STEFGSVEPE 346 (368)
Q Consensus 337 ~~~~~~~~~~ 346 (368)
....+-|.|+
T Consensus 173 ~~~~gKP~~~ 182 (249)
T TIGR01457 173 PVYIGKPNAI 182 (249)
T ss_pred ccccCCChHH
Confidence 4445555554
No 207
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=94.51 E-value=0.19 Score=45.95 Aligned_cols=79 Identities=13% Similarity=0.180 Sum_probs=60.5
Q ss_pred EEEEcCCChHHHHHHHH--HcCccccc--cEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCC
Q 043738 222 MALVSTHPRKTLETAID--SIGIEEYF--TAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARM 297 (368)
Q Consensus 222 vaivSn~~~~~~~~~l~--~~gl~~~F--d~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~ 297 (368)
-++||++ ..+-.+.+ -+++..+| +.|+++-.++ |...|+.+.+++|-+...-++|||+..--.+|+..++
T Consensus 178 NvLVTs~--qLVPaLaKcLLy~L~~~f~ieNIYSa~kvG----K~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~w 251 (274)
T TIGR01658 178 NVLVTSG--QLIPSLAKCLLFRLDTIFRIENVYSSIKVG----KLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQAMNW 251 (274)
T ss_pred EEEEEcC--ccHHHHHHHHHhccCCccccccccchhhcc----hHHHHHHHHHHhCCCCceEEEeCCChhHHHHHHhcCC
Confidence 3566665 33333333 34677776 5788887654 3789999999999988999999999999999999999
Q ss_pred eEEEEcCCC
Q 043738 298 KCVAVASKH 306 (368)
Q Consensus 298 ~~I~v~~~~ 306 (368)
+++-|....
T Consensus 252 PFw~I~~h~ 260 (274)
T TIGR01658 252 PFVKIDLHP 260 (274)
T ss_pred CeEEeecCC
Confidence 999887543
No 208
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=93.81 E-value=0.29 Score=44.14 Aligned_cols=88 Identities=9% Similarity=0.165 Sum_probs=45.3
Q ss_pred CccHHHHHHHHHhCCCcEEEEcCCChH---HHHHHHHHcCccc----cccEEEeCCCCCCCCCCHHHHHHHHHHc-CCCC
Q 043738 205 RTGSKEFVNILMHYKIPMALVSTHPRK---TLETAIDSIGIEE----YFTAIVAAEDVHRGKPDPEMFVYAAQLL-KFIP 276 (368)
Q Consensus 205 ~pg~~elL~~Lk~~Gi~vaivSn~~~~---~~~~~l~~~gl~~----~Fd~iv~~e~v~~~KP~~~~~~~~le~l-gi~p 276 (368)
.|.-...|..++.. -..|++-+... .....+...|+.- -|-.++.... ++++ ....+++.. ....
T Consensus 136 lpre~aaLa~~rEy--seti~~rs~d~~~~~~~~~L~e~glt~v~garf~~v~~as~-gKg~----Aa~~ll~~y~rl~~ 208 (274)
T COG3769 136 LPREQAALAMLREY--SETIIWRSSDERMAQFTARLNERGLTFVHGARFWHVLDASA-GKGQ----AANWLLETYRRLGG 208 (274)
T ss_pred CChHHhHHHHHHHh--hhheeecccchHHHHHHHHHHhcCceEEeccceEEEecccc-CccH----HHHHHHHHHHhcCc
Confidence 34455566677765 34444433222 1334555666552 1223333322 2333 333333332 2233
Q ss_pred Cc-EEEEcCCHhhHHHHHHcCCeE
Q 043738 277 ER-CIVFGNSNQTVEAAHDARMKC 299 (368)
Q Consensus 277 ~~-~l~IGDs~nDl~~A~~aG~~~ 299 (368)
.+ ++.+|||.||+.+..-....+
T Consensus 209 ~r~t~~~GDg~nD~Pl~ev~d~Af 232 (274)
T COG3769 209 ARTTLGLGDGPNDAPLLEVMDYAF 232 (274)
T ss_pred eeEEEecCCCCCcccHHHhhhhhe
Confidence 44 899999999998887655433
No 209
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=93.70 E-value=0.15 Score=42.52 Aligned_cols=106 Identities=14% Similarity=0.125 Sum_probs=71.3
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCC--ChH----HHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTH--PRK----TLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFI 275 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~--~~~----~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~ 275 (368)
+.+.|++...+++|.+. +.++++|.. ... -.+++.+.+++-.+-..++|+.. |+-
T Consensus 67 L~V~p~aq~v~keLt~~-y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vfCgnK------------------niv 127 (180)
T COG4502 67 LGVQPFAQTVLKELTSI-YNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVFCGNK------------------NIV 127 (180)
T ss_pred cCccccHHHHHHHHHhh-heEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEEecCC------------------CeE
Confidence 67889999999999987 899999876 222 33455666776666677777742 111
Q ss_pred CCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchhhhHHHHhcc
Q 043738 276 PERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDELSVVDLKNL 332 (368)
Q Consensus 276 p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~l~~L 332 (368)
.--++|+|++..++... |++ |+....+...+- --..+.++.|+-..++.+|
T Consensus 128 -kaDilIDDnp~nLE~F~--G~k-IlFdA~HN~nen--RF~Rv~~W~e~eq~ll~~~ 178 (180)
T COG4502 128 -KADILIDDNPLNLENFK--GNK-ILFDAHHNKNEN--RFVRVRDWYEAEQALLESL 178 (180)
T ss_pred -EeeEEecCCchhhhhcc--Cce-EEEecccccCcc--ceeeeccHHHHHHHHHHhh
Confidence 12378999999988775 554 444444443331 2356788999877777665
No 210
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=93.00 E-value=0.18 Score=46.53 Aligned_cols=91 Identities=19% Similarity=0.325 Sum_probs=53.8
Q ss_pred ccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcccccc--EEEe------------C--CC-CC-CCCCCH
Q 043738 201 IYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFT--AIVA------------A--ED-VH-RGKPDP 262 (368)
Q Consensus 201 ~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd--~iv~------------~--e~-v~-~~KP~~ 262 (368)
...+++|+.+|++.|.++++|+.|+|.+-...++..+++.+.. ++ .|++ + +. +. ..| +.
T Consensus 88 ~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~--~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NK-n~ 164 (246)
T PF05822_consen 88 DIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVF--HPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNK-NE 164 (246)
T ss_dssp ---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT----BTTEEEEEE-EEE-TTSBEEEE-SS---TT-H-HH
T ss_pred chhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCC--CCCeEEEeeeEEECCcceEeecCCCceEEeeC-Cc
Confidence 3689999999999999999999999999999999999987643 22 1111 1 11 11 111 11
Q ss_pred HHHHHHHHHc-CC-CCCcEEEEcCCHhhHHHHHHc
Q 043738 263 EMFVYAAQLL-KF-IPERCIVFGNSNQTVEAAHDA 295 (368)
Q Consensus 263 ~~~~~~le~l-gi-~p~~~l~IGDs~nDl~~A~~a 295 (368)
..+. -...+ .+ ...+++..||+..|+.|+..+
T Consensus 165 ~~l~-~~~~~~~~~~R~NvlLlGDslgD~~Ma~G~ 198 (246)
T PF05822_consen 165 SALE-DSPYFKQLKKRTNVLLLGDSLGDLHMADGV 198 (246)
T ss_dssp HHHT-THHHHHCTTT--EEEEEESSSGGGGTTTT-
T ss_pred cccc-CchHHHHhccCCcEEEecCccCChHhhcCC
Confidence 1121 11111 22 346799999999999998776
No 211
>PRK10444 UMP phosphatase; Provisional
Probab=92.82 E-value=0.97 Score=41.85 Aligned_cols=101 Identities=13% Similarity=0.230 Sum_probs=59.9
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHH---HHHHHcCccccccEEEeCCCC--------CCCC---CCHHHHHHH
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLE---TAIDSIGIEEYFTAIVAAEDV--------HRGK---PDPEMFVYA 268 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~---~~l~~~gl~~~Fd~iv~~e~v--------~~~K---P~~~~~~~~ 268 (368)
.+.||+.++++.|++.|++++++||....... ..+..+|+.---+.++++... ...+ --...+...
T Consensus 17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~ts~~~~~~~L~~~~~~~v~~~g~~~l~~~ 96 (248)
T PRK10444 17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLRRQEGKKAYVIGEGALIHE 96 (248)
T ss_pred eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEecHHHHHHHHHHhCCCCEEEEEcCHHHHHH
Confidence 45799999999999999999999998765444 444556775445566665210 0000 001234455
Q ss_pred HHHcCCC----CCcEEEEcCCHh-h---HHHHH---HcCCeEEEEc
Q 043738 269 AQLLKFI----PERCIVFGNSNQ-T---VEAAH---DARMKCVAVA 303 (368)
Q Consensus 269 le~lgi~----p~~~l~IGDs~n-D---l~~A~---~aG~~~I~v~ 303 (368)
++..|+. ..+.|++|...+ + +..|. +.|...+..+
T Consensus 97 l~~~g~~~~~~~~~~Vvvg~~~~~~~~~l~~a~~~l~~g~~~i~~n 142 (248)
T PRK10444 97 LYKAGFTITDINPDFVIVGETRSYNWDMMHKAAYFVANGARFIATN 142 (248)
T ss_pred HHHCcCEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEEC
Confidence 5555543 235677776542 2 22222 3477766655
No 212
>PLN02580 trehalose-phosphatase
Probab=92.75 E-value=0.29 Score=48.15 Aligned_cols=73 Identities=16% Similarity=0.036 Sum_probs=52.0
Q ss_pred CCCCHHHHHHHHHHcCCCCCc---EEEEcCCHhhHHHHHH-----cCCeEEEEcCCCCccccCCCcEEEcCchhhhHHHH
Q 043738 258 GKPDPEMFVYAAQLLKFIPER---CIVFGNSNQTVEAAHD-----ARMKCVAVASKHPVYELGAADLVVRHLDELSVVDL 329 (368)
Q Consensus 258 ~KP~~~~~~~~le~lgi~p~~---~l~IGDs~nDl~~A~~-----aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~l 329 (368)
+--|...++.++++++++..+ .++|||..||..|.+. .|+.+ .|..+. . ...|.|.+++-.|+. ..|
T Consensus 299 g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I-~Vgn~~--~-~t~A~y~L~dp~eV~-~~L 373 (384)
T PLN02580 299 DWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGI-LVSSVP--K-ESNAFYSLRDPSEVM-EFL 373 (384)
T ss_pred CCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEE-EEecCC--C-CccceEEcCCHHHHH-HHH
Confidence 445689999999999998653 3899999999999996 35543 333221 1 124899999999984 445
Q ss_pred hccccc
Q 043738 330 KNLADI 335 (368)
Q Consensus 330 ~~L~d~ 335 (368)
+.|+..
T Consensus 374 ~~L~~~ 379 (384)
T PLN02580 374 KSLVTW 379 (384)
T ss_pred HHHHHh
Confidence 655543
No 213
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=92.19 E-value=0.48 Score=44.08 Aligned_cols=50 Identities=16% Similarity=0.231 Sum_probs=39.1
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChH---HHHHHHHHcCccccccEEEeC
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRK---TLETAIDSIGIEEYFTAIVAA 252 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~---~~~~~l~~~gl~~~Fd~iv~~ 252 (368)
.+.|++.++|+.|+++|++++++||.+.. .....++.+|+.--.+.++++
T Consensus 21 ~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~i~ts 73 (257)
T TIGR01458 21 VAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDEVFTP 73 (257)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeEcH
Confidence 36789999999999999999999997555 356667778876444566654
No 214
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=92.09 E-value=0.12 Score=54.65 Aligned_cols=113 Identities=18% Similarity=0.155 Sum_probs=74.0
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccc----ccc--------------------EEEeCCCCCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEE----YFT--------------------AIVAAEDVHR 257 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~----~Fd--------------------~iv~~e~v~~ 257 (368)
.++.+.+.+.+..+++.|++++++|+......+.+.+..|+-. .+. .++.+.+..
T Consensus 589 dPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~- 667 (1019)
T KOG0203|consen 589 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELP- 667 (1019)
T ss_pred CCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEeccccc-
Confidence 4778888999999999999999999998888888888777421 111 123333321
Q ss_pred CCCCHHHHHHHHHHcC------CCC--------------CcEEEEcCCHhhHHHHHHcCCeEEE-EcCCCCccccCCCcE
Q 043738 258 GKPDPEMFVYAAQLLK------FIP--------------ERCIVFGNSNQTVEAAHDARMKCVA-VASKHPVYELGAADL 316 (368)
Q Consensus 258 ~KP~~~~~~~~le~lg------i~p--------------~~~l~IGDs~nDl~~A~~aG~~~I~-v~~~~~~~~~~~ad~ 316 (368)
.-.++-+.++++... -.| +-+-+.||+.||-.+.++|.++++| +.+..-.+ .+||.
T Consensus 668 -~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsK--qAADm 744 (1019)
T KOG0203|consen 668 -DMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSK--QAADM 744 (1019)
T ss_pred -ccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHH--hhcce
Confidence 112344555554432 012 3356789999999999999988777 44433222 24776
Q ss_pred EE
Q 043738 317 VV 318 (368)
Q Consensus 317 vv 318 (368)
|.
T Consensus 745 IL 746 (1019)
T KOG0203|consen 745 IL 746 (1019)
T ss_pred EE
Confidence 65
No 215
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=91.01 E-value=0.67 Score=50.55 Aligned_cols=77 Identities=13% Similarity=0.137 Sum_probs=54.5
Q ss_pred CCCCCCHHHHHHHHH---HcCCCCCcEEEEcCCHhhHHHHHHcCC-------------eEEEEcCCCCccccCCCcEEEc
Q 043738 256 HRGKPDPEMFVYAAQ---LLKFIPERCIVFGNSNQTVEAAHDARM-------------KCVAVASKHPVYELGAADLVVR 319 (368)
Q Consensus 256 ~~~KP~~~~~~~~le---~lgi~p~~~l~IGDs~nDl~~A~~aG~-------------~~I~v~~~~~~~~~~~ad~vv~ 319 (368)
..+-.|...++.+++ .+|+.++.+++|||+.||..|.+.++- -+|-|..+ -..|.|-++
T Consensus 758 p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~~-----~S~A~y~L~ 832 (854)
T PLN02205 758 PQGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQK-----PSKAKYYLD 832 (854)
T ss_pred eCCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEECCC-----CccCeEecC
Confidence 344556788888874 468999999999999999999998862 12223211 134889999
Q ss_pred CchhhhHHHHhcccccccc
Q 043738 320 HLDELSVVDLKNLADIEST 338 (368)
Q Consensus 320 sl~eL~~~~l~~L~d~~~~ 338 (368)
+..|+ ..+|+.|++....
T Consensus 833 d~~eV-~~lL~~L~~~~~~ 850 (854)
T PLN02205 833 DTAEI-VRLMQGLASVSEQ 850 (854)
T ss_pred CHHHH-HHHHHHHHhcchh
Confidence 99888 4556777765544
No 216
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=90.97 E-value=0.79 Score=44.66 Aligned_cols=95 Identities=16% Similarity=0.254 Sum_probs=59.2
Q ss_pred cCccHHHHHHHHHhCCCcEEEEcCCC------------hHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHH
Q 043738 204 LRTGSKEFVNILMHYKIPMALVSTHP------------RKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQL 271 (368)
Q Consensus 204 ~~pg~~elL~~Lk~~Gi~vaivSn~~------------~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~ 271 (368)
+++.+..=|+.+.+.|+.+++.||.. ..-++.+...+++. |........-...||-..++....+.
T Consensus 105 l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~anl~vP--i~~~~A~~~~~yRKP~tGMwe~~~~~ 182 (422)
T KOG2134|consen 105 LFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIVANLGVP--IQLLAAIIKGKYRKPSTGMWEFLKRL 182 (422)
T ss_pred eccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHHHhcCCc--eEEeeeccCCcccCcchhHHHHHHHH
Confidence 34444556777888899999888752 22334444555544 33222222335689999999888876
Q ss_pred cC----CCCCcEEEEcCC---------------HhhHHHHHHcCCeEE
Q 043738 272 LK----FIPERCIVFGNS---------------NQTVEAAHDARMKCV 300 (368)
Q Consensus 272 lg----i~p~~~l~IGDs---------------~nDl~~A~~aG~~~I 300 (368)
++ |.-..++|+||- ..|+.-|.++|++..
T Consensus 183 ~nd~~~Isek~s~fvgdaagr~~~~~~~kkd~S~~D~~FAaN~gvkF~ 230 (422)
T KOG2134|consen 183 ENDSVEISEKASIFVGDAAGRPLDALRRKKDHSSADRKFAANAGVKFK 230 (422)
T ss_pred hhccceeeechhhhhhhhccCccccccCcccccHHHHHHHHhcCCccC
Confidence 64 334455677763 247888999998754
No 217
>PLN02580 trehalose-phosphatase
Probab=90.58 E-value=0.47 Score=46.74 Aligned_cols=37 Identities=16% Similarity=0.299 Sum_probs=30.3
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHc
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSI 240 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~ 240 (368)
.+.+++++.|+.|.+. .+++|||+.....+..++.-.
T Consensus 141 ~~s~~~~~aL~~La~~-~~VAIVSGR~~~~L~~~l~~~ 177 (384)
T PLN02580 141 LMSDAMRSAVKNVAKY-FPTAIISGRSRDKVYELVGLT 177 (384)
T ss_pred cCCHHHHHHHHHHhhC-CCEEEEeCCCHHHHHHHhCCC
Confidence 4556788899999888 689999999988888877643
No 218
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=90.36 E-value=2.2 Score=39.57 Aligned_cols=72 Identities=19% Similarity=0.218 Sum_probs=46.3
Q ss_pred CCcEEEEcCCChHHHHHHHH---HcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHc
Q 043738 219 KIPMALVSTHPRKTLETAID---SIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDA 295 (368)
Q Consensus 219 Gi~vaivSn~~~~~~~~~l~---~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~a 295 (368)
-+++++||......-+..++ ..|+. +|..+.-... +|. .+++.++-. +||+|....++.|. .
T Consensus 186 piRtalVTAR~apah~RvI~TLr~Wgv~--vDEafFLgG~----~K~----~vL~~~~ph----IFFDDQ~~H~~~a~-~ 250 (264)
T PF06189_consen 186 PIRTALVTARSAPAHERVIRTLRSWGVR--VDEAFFLGGL----PKG----PVLKAFRPH----IFFDDQDGHLESAS-K 250 (264)
T ss_pred ceEEEEEEcCCCchhHHHHHHHHHcCCc--HhHHHHhCCC----chh----HHHHhhCCC----EeecCchhhhhHhh-c
Confidence 48899999876554455554 44554 5544443322 222 344444322 99999999999998 7
Q ss_pred CCeEEEEcCC
Q 043738 296 RMKCVAVASK 305 (368)
Q Consensus 296 G~~~I~v~~~ 305 (368)
++.++.|..+
T Consensus 251 ~vps~hVP~g 260 (264)
T PF06189_consen 251 VVPSGHVPYG 260 (264)
T ss_pred CCCEEeccCC
Confidence 7888887754
No 219
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=89.76 E-value=3 Score=38.09 Aligned_cols=51 Identities=16% Similarity=0.290 Sum_probs=37.8
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCCh---HHHHHHHHH-cCccccccEEEeCC
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPR---KTLETAIDS-IGIEEYFTAIVAAE 253 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~---~~~~~~l~~-~gl~~~Fd~iv~~e 253 (368)
.++|++.++|+.++++|+++.++||... ......+.. +|+.-..+.++++.
T Consensus 14 ~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits~ 68 (236)
T TIGR01460 14 KPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITSG 68 (236)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeHH
Confidence 5578999999999999999999997653 333344444 77765667777763
No 220
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=89.49 E-value=0.17 Score=43.18 Aligned_cols=14 Identities=21% Similarity=0.337 Sum_probs=12.9
Q ss_pred ceEEEEeccCcccc
Q 043738 118 WLGAIFEWEGVIIE 131 (368)
Q Consensus 118 ik~VIFDlDGTLid 131 (368)
+|+|+||+||||++
T Consensus 1 ~~~~~~D~Dgtl~~ 14 (154)
T TIGR01670 1 IRLLILDVDGVLTD 14 (154)
T ss_pred CeEEEEeCceeEEc
Confidence 57899999999997
No 221
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=88.26 E-value=0.26 Score=42.96 Aligned_cols=17 Identities=18% Similarity=0.315 Sum_probs=15.0
Q ss_pred CceEEEEeccCccccCc
Q 043738 117 GWLGAIFEWEGVIIEDN 133 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~ 133 (368)
.+|++|||+||||.|..
T Consensus 6 ~i~~~v~d~dGv~tdg~ 22 (169)
T TIGR02726 6 NIKLVILDVDGVMTDGR 22 (169)
T ss_pred cCeEEEEeCceeeECCe
Confidence 48999999999999863
No 222
>PLN03017 trehalose-phosphatase
Probab=87.57 E-value=1.1 Score=43.90 Aligned_cols=71 Identities=15% Similarity=0.088 Sum_probs=46.2
Q ss_pred CHHHHHHHHHHcCCCC---CcEEEEcCCHhhHHHHHHcC-C---eEEEEcCCCCccccCCCcEEEcCchhhhHHHHhccc
Q 043738 261 DPEMFVYAAQLLKFIP---ERCIVFGNSNQTVEAAHDAR-M---KCVAVASKHPVYELGAADLVVRHLDELSVVDLKNLA 333 (368)
Q Consensus 261 ~~~~~~~~le~lgi~p---~~~l~IGDs~nDl~~A~~aG-~---~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~l~~L~ 333 (368)
|...++.+++.++... .-.+||||..+|-.|++.+. + -.|.|... . . ...|.|.+++..|+. ..|+.|+
T Consensus 284 KG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~-~-k-~T~A~y~L~dp~eV~-~fL~~L~ 359 (366)
T PLN03017 284 KGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKF-P-K-DTDASYSLQDPSEVM-DFLARLV 359 (366)
T ss_pred HHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCC-C-C-CCcceEeCCCHHHHH-HHHHHHH
Confidence 4566777777776542 35899999999988877662 1 23444321 1 1 135899999999984 4556665
Q ss_pred cc
Q 043738 334 DI 335 (368)
Q Consensus 334 d~ 335 (368)
+.
T Consensus 360 ~~ 361 (366)
T PLN03017 360 EW 361 (366)
T ss_pred HH
Confidence 43
No 223
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=86.94 E-value=2.8 Score=42.16 Aligned_cols=85 Identities=15% Similarity=0.144 Sum_probs=69.0
Q ss_pred HHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCC----CCCCCCCHHHHHHHHHHcCCCCCcEEEEc
Q 043738 208 SKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAED----VHRGKPDPEMFVYAAQLLKFIPERCIVFG 283 (368)
Q Consensus 208 ~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~----v~~~KP~~~~~~~~le~lgi~p~~~l~IG 283 (368)
...++..|+.+|+-+++.|-.....++..+.+.+ |.++.-++ .....|+.+-++.++++|++..+..+|++
T Consensus 260 fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~khp-----~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFiD 334 (574)
T COG3882 260 FQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKHP-----DMILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFID 334 (574)
T ss_pred HHHHHHHHHhccEEEEEecCCchhhHHHHHhhCC-----CeEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEec
Confidence 5678999999999999999988888888887654 22333322 23578999999999999999999999999
Q ss_pred CCHhhHHHHHHcCC
Q 043738 284 NSNQTVEAAHDARM 297 (368)
Q Consensus 284 Ds~nDl~~A~~aG~ 297 (368)
|++-..+-.+.-+-
T Consensus 335 D~p~ErE~vk~~~~ 348 (574)
T COG3882 335 DNPAERELVKRELP 348 (574)
T ss_pred CCHHHHHHHHhcCc
Confidence 99988887777664
No 224
>PLN02151 trehalose-phosphatase
Probab=86.89 E-value=0.95 Score=44.11 Aligned_cols=72 Identities=14% Similarity=0.126 Sum_probs=45.1
Q ss_pred CHHHHHHHHHHcCCCCC---cEEEEcCCHhhHHHHHHc-----CCeEEEEcCCCCccccCCCcEEEcCchhhhHHHHhcc
Q 043738 261 DPEMFVYAAQLLKFIPE---RCIVFGNSNQTVEAAHDA-----RMKCVAVASKHPVYELGAADLVVRHLDELSVVDLKNL 332 (368)
Q Consensus 261 ~~~~~~~~le~lgi~p~---~~l~IGDs~nDl~~A~~a-----G~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~l~~L 332 (368)
|...+..+++.++..-. -.+||||..+|-.|+..+ |+ .|.|.... ....|+|.+++-.++. ..|+.|
T Consensus 270 KG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~-gI~Vg~~~---k~T~A~y~L~dp~eV~-~~L~~L 344 (354)
T PLN02151 270 KGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGL-GILVSKYA---KETNASYSLQEPDEVM-EFLERL 344 (354)
T ss_pred HHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCc-cEEeccCC---CCCcceEeCCCHHHHH-HHHHHH
Confidence 34556666666654322 279999999998887754 32 23343211 1124899999999994 455666
Q ss_pred ccccc
Q 043738 333 ADIES 337 (368)
Q Consensus 333 ~d~~~ 337 (368)
++...
T Consensus 345 ~~~~~ 349 (354)
T PLN02151 345 VEWKQ 349 (354)
T ss_pred HHhhh
Confidence 65443
No 225
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=86.83 E-value=1.4 Score=48.16 Aligned_cols=36 Identities=25% Similarity=0.243 Sum_probs=29.0
Q ss_pred CccHHHHHHHH-HhCCCcEEEEcCCChHHHHHHHHHc
Q 043738 205 RTGSKEFVNIL-MHYKIPMALVSTHPRKTLETAIDSI 240 (368)
Q Consensus 205 ~pg~~elL~~L-k~~Gi~vaivSn~~~~~~~~~l~~~ 240 (368)
.+++.++|+.| ++.|..++|+|+.....++.++...
T Consensus 618 ~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~ 654 (854)
T PLN02205 618 SSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPC 654 (854)
T ss_pred CHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCC
Confidence 35567888887 6678999999999999988888653
No 226
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=83.71 E-value=1.9 Score=40.23 Aligned_cols=41 Identities=20% Similarity=0.318 Sum_probs=36.2
Q ss_pred ccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccc
Q 043738 206 TGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYF 246 (368)
Q Consensus 206 pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~F 246 (368)
+.+.+.|+.|++.|++++++||.+...+...++.+|+..++
T Consensus 24 ~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~ 64 (273)
T PRK00192 24 EPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPF 64 (273)
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCE
Confidence 45678999999999999999999999999999999987654
No 227
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=83.49 E-value=3.4 Score=39.76 Aligned_cols=86 Identities=13% Similarity=0.217 Sum_probs=58.0
Q ss_pred ccCccHHHHHHHHHhC----CCcEEEEcCCC---hHH-HHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCC
Q 043738 203 RLRTGSKEFVNILMHY----KIPMALVSTHP---RKT-LETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKF 274 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~----Gi~vaivSn~~---~~~-~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi 274 (368)
.+.||+.++++.|+.. |+++.++||.. ... ...+.+++|+.--.+.++++. ......+++++
T Consensus 16 ~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~~~~~i~~s~---------~~~~~ll~~~~- 85 (321)
T TIGR01456 16 KPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDVSPLQVIQSH---------SPYKSLVNKYE- 85 (321)
T ss_pred cccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCCCHHHHHhhh---------HHHHHHHHHcC-
Confidence 4478899999999998 99999999986 333 333447888763334444442 23445555543
Q ss_pred CCCcEEEEcCCHhhHHHHHHcCCeEEE
Q 043738 275 IPERCIVFGNSNQTVEAAHDARMKCVA 301 (368)
Q Consensus 275 ~p~~~l~IGDs~nDl~~A~~aG~~~I~ 301 (368)
..+++||.+. -.+.++..|+..+.
T Consensus 86 --~~v~viG~~~-~~~~l~~~G~~~vv 109 (321)
T TIGR01456 86 --KRILAVGTGS-VRGVAEGYGFQNVV 109 (321)
T ss_pred --CceEEEeChH-HHHHHHHcCCcccc
Confidence 3689999764 47777789987653
No 228
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=83.17 E-value=0.66 Score=39.62 Aligned_cols=17 Identities=18% Similarity=0.306 Sum_probs=15.0
Q ss_pred CceEEEEeccCccccCc
Q 043738 117 GWLGAIFEWEGVIIEDN 133 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~ 133 (368)
++|++|||+||||+|..
T Consensus 7 ~IkLli~DVDGvLTDG~ 23 (170)
T COG1778 7 NIKLLILDVDGVLTDGK 23 (170)
T ss_pred hceEEEEeccceeecCe
Confidence 48999999999999854
No 229
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=81.61 E-value=3.6 Score=38.06 Aligned_cols=42 Identities=10% Similarity=0.203 Sum_probs=37.0
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccc
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEE 244 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~ 244 (368)
.+.+...+.|++++++|+++++.|+.+...+...++.+++..
T Consensus 20 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 61 (270)
T PRK10513 20 TISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQ 61 (270)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCC
Confidence 455677899999999999999999999999999999998764
No 230
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=81.45 E-value=4.3 Score=43.47 Aligned_cols=42 Identities=17% Similarity=0.188 Sum_probs=35.4
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcc
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIE 243 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~ 243 (368)
.++.++.++.++.|.+.+.+++.+||.+.-..-...+.+|+.
T Consensus 674 CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv 715 (1160)
T KOG0209|consen 674 CPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIV 715 (1160)
T ss_pred CCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeee
Confidence 477899999999999999999999998877777777766653
No 231
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=81.05 E-value=8 Score=37.85 Aligned_cols=44 Identities=14% Similarity=0.070 Sum_probs=32.4
Q ss_pred CHHHHHHHHHHc----CCCCCcEEEEcCCH-----hhHHHHHHcCCeEEEEcCCC
Q 043738 261 DPEMFVYAAQLL----KFIPERCIVFGNSN-----QTVEAAHDARMKCVAVASKH 306 (368)
Q Consensus 261 ~~~~~~~~le~l----gi~p~~~l~IGDs~-----nDl~~A~~aG~~~I~v~~~~ 306 (368)
|..+...+-+.+ ++.+++|+.|||.. ||. .|+.+| .++||+++.
T Consensus 350 Ks~GV~~lQ~y~~~~~~i~~~~tLHVGDQF~s~GaNDf-kaR~a~-~t~WIasP~ 402 (408)
T PF06437_consen 350 KSLGVRALQKYFDPEGGIKPSETLHVGDQFLSAGANDF-KARLAC-TTAWIASPQ 402 (408)
T ss_pred cHHhHHHHHHHHHhccCCCccceeeehhhhhccCCcch-hhhhhc-eeeEecCHH
Confidence 466777777777 89999999999954 666 445555 478887654
No 232
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=80.28 E-value=0.84 Score=36.04 Aligned_cols=17 Identities=24% Similarity=0.593 Sum_probs=12.8
Q ss_pred EEEeccCccccCcchHH
Q 043738 121 AIFEWEGVIIEDNPDLE 137 (368)
Q Consensus 121 VIFDlDGTLid~~~~i~ 137 (368)
++||+||||++....+.
T Consensus 1 ~l~D~dGvl~~g~~~ip 17 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIP 17 (101)
T ss_dssp EEEESTTTSEETTEE-T
T ss_pred CEEeCccEeEeCCCcCc
Confidence 68999999998664433
No 233
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=79.40 E-value=3.3 Score=37.07 Aligned_cols=36 Identities=17% Similarity=0.343 Sum_probs=33.2
Q ss_pred HHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcc
Q 043738 208 SKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIE 243 (368)
Q Consensus 208 ~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~ 243 (368)
.++.|+.+++.|++++++||.+...+...++.+++.
T Consensus 21 ~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 21 AAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 568899999999999999999999999999999986
No 234
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=79.21 E-value=3.6 Score=37.42 Aligned_cols=39 Identities=23% Similarity=0.373 Sum_probs=34.8
Q ss_pred ccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccc
Q 043738 206 TGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEE 244 (368)
Q Consensus 206 pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~ 244 (368)
+...+.|+.++++|++++++|+.+...+...++.+|+..
T Consensus 18 ~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 18 GPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 457789999999999999999999999999999999764
No 235
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=78.55 E-value=36 Score=31.46 Aligned_cols=47 Identities=15% Similarity=0.175 Sum_probs=35.8
Q ss_pred CcEEEEcCCHhh---HHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchhhh
Q 043738 277 ERCIVFGNSNQT---VEAAHDARMKCVAVASKHPVYELGAADLVVRHLDELS 325 (368)
Q Consensus 277 ~~~l~IGDs~nD---l~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~ 325 (368)
-++++|=|-..| +.-|+++|+++|++-+.+...+ .-||+|+..++-.
T Consensus 157 Pd~l~ViDp~~e~iAv~EA~klgIPVvAlvDTn~dpd--~VD~~IP~Ndda~ 206 (252)
T COG0052 157 PDVLFVIDPRKEKIAVKEANKLGIPVVALVDTNCDPD--GVDYVIPGNDDAI 206 (252)
T ss_pred CCEEEEeCCcHhHHHHHHHHHcCCCEEEEecCCCCCc--cCceeecCCChHH
Confidence 467888887765 7778889999999886665444 3799999888754
No 236
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=76.90 E-value=6.2 Score=41.10 Aligned_cols=93 Identities=12% Similarity=0.127 Sum_probs=53.7
Q ss_pred cHHHHHHHHHhCCCcEEEEcCC---ChHHHHHHHHHcCcccc--cc--EEEeCC--------CCCCCCCC---HHHHHHH
Q 043738 207 GSKEFVNILMHYKIPMALVSTH---PRKTLETAIDSIGIEEY--FT--AIVAAE--------DVHRGKPD---PEMFVYA 268 (368)
Q Consensus 207 g~~elL~~Lk~~Gi~vaivSn~---~~~~~~~~l~~~gl~~~--Fd--~iv~~e--------~v~~~KP~---~~~~~~~ 268 (368)
|+..|...++++||++..+|.. ....++..|..+.-+.+ -+ .+++.+ ++...||. -.++..+
T Consensus 562 GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LPdGPViLSPd~lf~Al~REVI~RkPe~FKIAcL~DI 641 (738)
T KOG2116|consen 562 GVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLPDGPVILSPDSLFAALHREVIERKPEVFKIACLTDI 641 (738)
T ss_pred hHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCCCCCEEeCCCcchHHHHHHHHHcCchhhhHHHHHHH
Confidence 5667777888888888888874 33455666665543322 12 222222 23334443 2333344
Q ss_pred HHHcCCCC-CcEEEEcCCHhhHHHHHHcCCeE
Q 043738 269 AQLLKFIP-ERCIVFGNSNQTVEAAHDARMKC 299 (368)
Q Consensus 269 le~lgi~p-~~~l~IGDs~nDl~~A~~aG~~~ 299 (368)
.+.+.-.. -=...||+..+|+-.=+++|+..
T Consensus 642 k~LF~p~~nPFYAgFGNR~TDviSY~~VgVP~ 673 (738)
T KOG2116|consen 642 KNLFPPSGNPFYAGFGNRITDVISYRQVGVPL 673 (738)
T ss_pred HHhcCCCCCceeeecCCCcccceeeeeecCCc
Confidence 44454111 12467889999999999999873
No 237
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=76.73 E-value=4.2 Score=36.52 Aligned_cols=43 Identities=21% Similarity=0.154 Sum_probs=37.3
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcccc
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEY 245 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~ 245 (368)
.+.+...+.|+.+++.|++++++|+.+...+...+..+++..+
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~ 62 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGP 62 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCc
Confidence 4556788899999999999999999999988888888887654
No 238
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=76.33 E-value=4 Score=36.42 Aligned_cols=42 Identities=17% Similarity=0.121 Sum_probs=35.5
Q ss_pred cCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcccc
Q 043738 204 LRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEY 245 (368)
Q Consensus 204 ~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~ 245 (368)
+.+...+.|++|++.|++++++|+.+...+...++.+++..+
T Consensus 19 i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~ 60 (215)
T TIGR01487 19 ISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGP 60 (215)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCc
Confidence 345667889999999999999999999989888888887643
No 239
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=75.92 E-value=4 Score=44.34 Aligned_cols=38 Identities=18% Similarity=0.223 Sum_probs=29.4
Q ss_pred ccCccHHHHHHHHHhC-CCcEEEEcCCChHHHHHHHHHc
Q 043738 203 RLRTGSKEFVNILMHY-KIPMALVSTHPRKTLETAIDSI 240 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~-Gi~vaivSn~~~~~~~~~l~~~ 240 (368)
.+.|++.++|+.|.+. +-.|+|+|+.+...++.++...
T Consensus 532 ~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~ 570 (797)
T PLN03063 532 GLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEY 570 (797)
T ss_pred CCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCC
Confidence 4556777888888765 5779999999888888888653
No 240
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=75.43 E-value=4.7 Score=37.42 Aligned_cols=42 Identities=10% Similarity=0.231 Sum_probs=36.0
Q ss_pred cCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcccc
Q 043738 204 LRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEY 245 (368)
Q Consensus 204 ~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~ 245 (368)
+.+...+.|++++++|++++++|+.+...+...++.+++..+
T Consensus 20 i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~ 61 (272)
T PRK15126 20 LGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAY 61 (272)
T ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCc
Confidence 344566889999999999999999999999999999988654
No 241
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=74.92 E-value=5.2 Score=36.73 Aligned_cols=41 Identities=20% Similarity=0.392 Sum_probs=35.2
Q ss_pred cCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccc
Q 043738 204 LRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEE 244 (368)
Q Consensus 204 ~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~ 244 (368)
+.+...+.|++++++|++++++||.+...+...++.+++..
T Consensus 17 i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~ 57 (256)
T TIGR00099 17 ISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDT 57 (256)
T ss_pred cCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCC
Confidence 34556788999999999999999999999999999988763
No 242
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=74.83 E-value=15 Score=30.30 Aligned_cols=82 Identities=10% Similarity=0.096 Sum_probs=59.2
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChH-HHHHHHHHcCcccc---------ccEEEeCCCCCCCCCCHHHHHHHHHH
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRK-TLETAIDSIGIEEY---------FTAIVAAEDVHRGKPDPEMFVYAAQL 271 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~-~~~~~l~~~gl~~~---------Fd~iv~~e~v~~~KP~~~~~~~~le~ 271 (368)
+..+++++..|..|++.|+.++++|++... .+...|+.+.+... |..+..++.+ +-..|..+-+.
T Consensus 43 ~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~fkvk~~Gvlkps~e~ft~~~~g~gs-----klghfke~~n~ 117 (144)
T KOG4549|consen 43 MIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETFKVKQTGVLKPSLEEFTFEAVGDGS-----KLGHFKEFTNN 117 (144)
T ss_pred eeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhccCcccccchhhhcCceeeecCcc-----cchhHHHHhhc
Confidence 578899999999999999999999997544 55677777654432 3333333332 23457788888
Q ss_pred cCCCCCcEEEEcCCHhh
Q 043738 272 LKFIPERCIVFGNSNQT 288 (368)
Q Consensus 272 lgi~p~~~l~IGDs~nD 288 (368)
-++...+..++.|-..+
T Consensus 118 s~~~~k~~~~fdDesrn 134 (144)
T KOG4549|consen 118 SNSIEKNKQVFDDESRN 134 (144)
T ss_pred cCcchhceeeecccccC
Confidence 88888888888886643
No 243
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=74.76 E-value=5.5 Score=43.87 Aligned_cols=39 Identities=23% Similarity=0.288 Sum_probs=32.2
Q ss_pred ccCccHHHHHHHHHhC-CCcEEEEcCCChHHHHHHHHHcC
Q 043738 203 RLRTGSKEFVNILMHY-KIPMALVSTHPRKTLETAIDSIG 241 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~-Gi~vaivSn~~~~~~~~~l~~~g 241 (368)
.+.|++.++|+.|.+. +..|+|+|+.....++.++...+
T Consensus 622 ~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~ 661 (934)
T PLN03064 622 RLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFD 661 (934)
T ss_pred CCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCC
Confidence 5667888999999875 57899999999999998887654
No 244
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=73.88 E-value=5.6 Score=36.72 Aligned_cols=43 Identities=14% Similarity=0.287 Sum_probs=38.9
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcccc
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEY 245 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~ 245 (368)
.+.+.+.+.|+.+++.|++++++|+.+...+...++.+++..+
T Consensus 20 ~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~ 62 (264)
T COG0561 20 TISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGP 62 (264)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCcc
Confidence 4667788999999999999999999999999999999998863
No 245
>PRK10976 putative hydrolase; Provisional
Probab=73.77 E-value=5.5 Score=36.75 Aligned_cols=43 Identities=19% Similarity=0.270 Sum_probs=37.6
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcccc
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEY 245 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~ 245 (368)
.+.+...+.|++++++|+++++.|+.+...+...++.+++..+
T Consensus 19 ~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~ 61 (266)
T PRK10976 19 TLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSY 61 (266)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCe
Confidence 4567788999999999999999999999999889999987654
No 246
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=73.75 E-value=4.5 Score=37.40 Aligned_cols=94 Identities=17% Similarity=0.228 Sum_probs=59.9
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeC----CCC----CCCCC-------CHHHHH
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAA----EDV----HRGKP-------DPEMFV 266 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~----e~v----~~~KP-------~~~~~~ 266 (368)
..+..|..+|...|..+++|+.+.|.+-...++..+.+.....-+-.+++- .+. +..+| +...++
T Consensus 137 i~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~pn~k~vSN~~~F~edg~l~gF~~~Lihtfnkn~~v~~ 216 (298)
T KOG3128|consen 137 IALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHPNVKFVSNYMDFDEDGNLCGFSQPLIHTFNKNSSVLQ 216 (298)
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCccHHhhhhhhhhcccchhhhhhHHHHHHHccchHHHH
Confidence 466678999999999999999999999888887777643221111111110 000 11111 122333
Q ss_pred HHHHHcCC--CCCcEEEEcCCHhhHHHHHHc
Q 043738 267 YAAQLLKF--IPERCIVFGNSNQTVEAAHDA 295 (368)
Q Consensus 267 ~~le~lgi--~p~~~l~IGDs~nDl~~A~~a 295 (368)
...+.+.. ....+++.||+..|+.||.-+
T Consensus 217 ~~s~yf~~~~~~~nVillGdsigdl~ma~gv 247 (298)
T KOG3128|consen 217 NESEYFHQLAGRVNVILLGDSIGDLHMADGV 247 (298)
T ss_pred hhhHHHhhccCCceEEEeccccccchhhcCC
Confidence 44555543 457899999999999999765
No 247
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=73.28 E-value=27 Score=33.20 Aligned_cols=93 Identities=18% Similarity=0.259 Sum_probs=58.8
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHH---HcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAID---SIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPER 278 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~---~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~ 278 (368)
-.+.||+.+.++.|++.|.++.++||.+...-+..++ ++|+.. +..+++- -|...+..++-+. ....+.
T Consensus 37 ~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~~-----v~e~~i~--ssa~~~a~ylk~~-~~~~k~ 108 (306)
T KOG2882|consen 37 EKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFNS-----VKEENIF--SSAYAIADYLKKR-KPFGKK 108 (306)
T ss_pred CCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCccc-----cCccccc--ChHHHHHHHHHHh-CcCCCe
Confidence 3788999999999999999999999998776666655 456553 2222211 1112233333333 345578
Q ss_pred EEEEcCCHhhHHHHHHcCCeEEEEc
Q 043738 279 CIVFGNSNQTVEAAHDARMKCVAVA 303 (368)
Q Consensus 279 ~l~IGDs~nDl~~A~~aG~~~I~v~ 303 (368)
++++|-.. =-+-+.++|+.++...
T Consensus 109 Vyvig~~g-i~~eL~~aG~~~~g~~ 132 (306)
T KOG2882|consen 109 VYVIGEEG-IREELDEAGFEYFGGG 132 (306)
T ss_pred EEEecchh-hhHHHHHcCceeecCC
Confidence 88888433 1234677887766655
No 248
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=72.81 E-value=6.3 Score=37.46 Aligned_cols=44 Identities=23% Similarity=0.314 Sum_probs=38.3
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccc
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYF 246 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~F 246 (368)
...+.+.+.|+.|+++|+++++.|+.....+..+.+.+++..+|
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~ 61 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHPF 61 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCeE
Confidence 45566889999999999999999999999999999999987543
No 249
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=72.59 E-value=6.3 Score=36.32 Aligned_cols=42 Identities=7% Similarity=0.063 Sum_probs=35.4
Q ss_pred cCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcccc
Q 043738 204 LRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEY 245 (368)
Q Consensus 204 ~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~ 245 (368)
+.+...+.|++++++|+.+++.|+.+...+...++.+++..+
T Consensus 21 i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~ 62 (272)
T PRK10530 21 ILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALDTP 62 (272)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCC
Confidence 334566889999999999999999999999999999987643
No 250
>COG0731 Fe-S oxidoreductases [Energy production and conversion]
Probab=72.59 E-value=13 Score=35.33 Aligned_cols=48 Identities=10% Similarity=0.075 Sum_probs=36.4
Q ss_pred CccccCccHHHHHHHHHhCC-CcEEEEcCCChHHHHHHHHHcCccccccEEEeCC
Q 043738 200 GIYRLRTGSKEFVNILMHYK-IPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAE 253 (368)
Q Consensus 200 ~~~~~~pg~~elL~~Lk~~G-i~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e 253 (368)
+...++|.+.++++.+++.| +++++|||+.. ...++.+. .+|.++.+-
T Consensus 89 GEPTLy~~L~elI~~~k~~g~~~tflvTNgsl---pdv~~~L~---~~dql~~sL 137 (296)
T COG0731 89 GEPTLYPNLGELIEEIKKRGKKTTFLVTNGSL---PDVLEELK---LPDQLYVSL 137 (296)
T ss_pred CCcccccCHHHHHHHHHhcCCceEEEEeCCCh---HHHHHHhc---cCCEEEEEe
Confidence 34789999999999999999 79999999977 34444443 366665543
No 251
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=71.71 E-value=6.6 Score=35.04 Aligned_cols=39 Identities=18% Similarity=0.213 Sum_probs=33.1
Q ss_pred ccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccc
Q 043738 206 TGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEE 244 (368)
Q Consensus 206 pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~ 244 (368)
+...+.|+.+++.|++++++|+.+...+...++.+++..
T Consensus 18 ~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~ 56 (225)
T TIGR01482 18 ESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPD 56 (225)
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC
Confidence 445678899999999999999999999988888888543
No 252
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=71.48 E-value=22 Score=29.54 Aligned_cols=97 Identities=15% Similarity=0.229 Sum_probs=49.1
Q ss_pred cHHHHHHHHHhCCCcEEEEcCCChHHH-HHHHH----HcCcccccc-EEEeCCCC-----CCCCCCHHHHHHHHHHcCCC
Q 043738 207 GSKEFVNILMHYKIPMALVSTHPRKTL-ETAID----SIGIEEYFT-AIVAAEDV-----HRGKPDPEMFVYAAQLLKFI 275 (368)
Q Consensus 207 g~~elL~~Lk~~Gi~vaivSn~~~~~~-~~~l~----~~gl~~~Fd-~iv~~e~v-----~~~KP~~~~~~~~le~lgi~ 275 (368)
.+.+++.....+|-++.++-++..... ..... .+++..... .+....+. ...--.......++..+.+.
T Consensus 23 ~aa~~i~~~~~~gg~i~~~G~G~S~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (138)
T PF13580_consen 23 KAADLIAEALRNGGRIFVCGNGHSAAIASHFAADLGGLFGVNRILLPAIALNDDALTAISNDLEYDEGFARQLLALYDIR 102 (138)
T ss_dssp HHHHHHHHHHHTT--EEEEESTHHHHHHHHHHHHHHCHSSSTSSS-SEEETTSTHHHHHHHHTTGGGTHHHHHHHHTT--
T ss_pred HHHHHHHHHHHCCCEEEEEcCchhhhHHHHHHHHHhcCcCCCcccccccccccchHhhhhcccchhhHHHHHHHHHcCCC
Confidence 345666666777888888887755433 22222 233333333 33332221 00111233456777777889
Q ss_pred CCcEEEE----cCCHhhH---HHHHHcCCeEEEEc
Q 043738 276 PERCIVF----GNSNQTV---EAAHDARMKCVAVA 303 (368)
Q Consensus 276 p~~~l~I----GDs~nDl---~~A~~aG~~~I~v~ 303 (368)
|.+++++ |.+.|=+ +.|++.||.+|.++
T Consensus 103 ~gDvli~iS~SG~s~~vi~a~~~Ak~~G~~vIalT 137 (138)
T PF13580_consen 103 PGDVLIVISNSGNSPNVIEAAEEAKERGMKVIALT 137 (138)
T ss_dssp TT-EEEEEESSS-SHHHHHHHHHHHHTT-EEEEEE
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 9998777 5566654 45566799999875
No 253
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=71.09 E-value=8.5 Score=37.92 Aligned_cols=97 Identities=11% Similarity=0.054 Sum_probs=67.9
Q ss_pred HHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHc---CccccccEEEeCCC---------------C--------------
Q 043738 208 SKEFVNILMHYKIPMALVSTHPRKTLETAIDSI---GIEEYFTAIVAAED---------------V-------------- 255 (368)
Q Consensus 208 ~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~---gl~~~Fd~iv~~e~---------------v-------------- 255 (368)
...+|..++..|.++.++||+.-..+...+.++ ++..||+.++.... -
T Consensus 203 ~v~~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~~~p~ 282 (424)
T KOG2469|consen 203 IVPLLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDNTGPL 282 (424)
T ss_pred cccchHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeeccccccccccccCCcc
Confidence 334899999999999999999877777666643 57788887665420 0
Q ss_pred -CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCH-hh-HHHHHHcCCeEEEEcC
Q 043738 256 -HRGKPDPEMFVYAAQLLKFIPERCIVFGNSN-QT-VEAAHDARMKCVAVAS 304 (368)
Q Consensus 256 -~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~-nD-l~~A~~aG~~~I~v~~ 304 (368)
..+++.......+.+.++..-.+++++||+. .| +..-+.-|..++.|..
T Consensus 283 e~~~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~p 334 (424)
T KOG2469|consen 283 EQGGVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAP 334 (424)
T ss_pred hhcccCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEEeh
Confidence 1123334556677777888779999999999 45 4444556877776653
No 254
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=70.60 E-value=11 Score=41.92 Aligned_cols=72 Identities=14% Similarity=0.119 Sum_probs=51.5
Q ss_pred HHHHHHHHHcCccccccEEEeCC-----CCCCCCCCHHHHHHHHHHcCCCCCcE-EEEcCCHh-hHHHHHHcCCeEEEEc
Q 043738 231 KTLETAIDSIGIEEYFTAIVAAE-----DVHRGKPDPEMFVYAAQLLKFIPERC-IVFGNSNQ-TVEAAHDARMKCVAVA 303 (368)
Q Consensus 231 ~~~~~~l~~~gl~~~Fd~iv~~e-----~v~~~KP~~~~~~~~le~lgi~p~~~-l~IGDs~n-Dl~~A~~aG~~~I~v~ 303 (368)
..++..|...|+. ...+++.. .++..-.+...+++++.++|++.+++ ||+||+-| |+++....-.++|.+.
T Consensus 924 ~elr~~Lr~~gLr--~~~iys~~~~~LDVlP~~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll~G~~~tvi~~ 1001 (1050)
T TIGR02468 924 KELRKLLRIQGLR--CHAVYCRNGTRLNVIPLLASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLLGGLHKTVILK 1001 (1050)
T ss_pred HHHHHHHHhCCCc--eEEEeecCCcEeeeeeCCCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHhCCceeEEEEe
Confidence 4666777777766 33445443 24556667999999999999999999 55999998 9887754444466665
Q ss_pred C
Q 043738 304 S 304 (368)
Q Consensus 304 ~ 304 (368)
+
T Consensus 1002 g 1002 (1050)
T TIGR02468 1002 G 1002 (1050)
T ss_pred c
Confidence 4
No 255
>PLN02151 trehalose-phosphatase
Probab=69.92 E-value=11 Score=36.77 Aligned_cols=36 Identities=25% Similarity=0.380 Sum_probs=22.1
Q ss_pred HHHHHHHHHcCcccccc--EEEeCCCCCCCCCCHHHHHHHHH
Q 043738 231 KTLETAIDSIGIEEYFT--AIVAAEDVHRGKPDPEMFVYAAQ 270 (368)
Q Consensus 231 ~~~~~~l~~~gl~~~Fd--~iv~~e~v~~~KP~~~~~~~~le 270 (368)
..++.+++.+++...-+ .++.+++. .+.++|..+-+
T Consensus 272 ~Av~~Ll~~~~~~~~~~~~pvyiGDD~----TDEDaF~~L~~ 309 (354)
T PLN02151 272 KALEFLLESLGYANCTDVFPIYIGDDR----TDEDAFKILRD 309 (354)
T ss_pred HHHHHHHHhcccccCCCCeEEEEcCCC----cHHHHHHHHhh
Confidence 35567778777654322 45666654 46788886654
No 256
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=69.76 E-value=8.4 Score=40.41 Aligned_cols=84 Identities=15% Similarity=0.210 Sum_probs=59.1
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCc-cccc-cEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCc-
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGI-EEYF-TAIVAAEDVHRGKPDPEMFVYAAQLLKFIPER- 278 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl-~~~F-d~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~- 278 (368)
+.+.|++.+||+.+... +.+.|.|-+.+.++..+++-+.= ..|| |.|++-++....| .++.....|..
T Consensus 200 vKlRP~~~efL~~~skl-femhVyTmg~R~YA~~i~~liDP~~~lF~dRIisrde~~~~k--------t~dL~~~~p~g~ 270 (635)
T KOG0323|consen 200 VKLRPFVHEFLKEANKL-FEMHVYTMGTRDYALEIAKLIDPEGKYFGDRIISRDESPFFK--------TLDLVLLFPCGD 270 (635)
T ss_pred EEeCccHHHHHHHHHhh-ceeEEEeccchHHHHHHHHHhCCCCccccceEEEecCCCccc--------ccccccCCCCCC
Confidence 68899999999999977 99999999999999999887642 2455 6788888744433 22333333444
Q ss_pred --EEEEcCCHhhHHHHHH
Q 043738 279 --CIVFGNSNQTVEAAHD 294 (368)
Q Consensus 279 --~l~IGDs~nDl~~A~~ 294 (368)
++.|+|..+-......
T Consensus 271 smvvIIDDr~dVW~~~~~ 288 (635)
T KOG0323|consen 271 SMVVIIDDRSDVWPDHKR 288 (635)
T ss_pred ccEEEEeCccccccCCCc
Confidence 6666666654444443
No 257
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=68.48 E-value=24 Score=33.90 Aligned_cols=84 Identities=15% Similarity=0.241 Sum_probs=54.4
Q ss_pred cccCccHHHHHHHHHhCC-CcEEEEcCCChHHHHHHHHHcC-------------ccccccEEEeCCCCCCCCCCHHHHHH
Q 043738 202 YRLRTGSKEFVNILMHYK-IPMALVSTHPRKTLETAIDSIG-------------IEEYFTAIVAAEDVHRGKPDPEMFVY 267 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~G-i~vaivSn~~~~~~~~~l~~~g-------------l~~~Fd~iv~~e~v~~~KP~~~~~~~ 267 (368)
-.++||+..+.+.|.+.| .++..+||++.....-+-+.++ +...++.++.+....++ ..+.-
T Consensus 195 r~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~efi~~~~~P~GPl~L~~~g~~~~~i~~sga~rK~----~~l~n 270 (373)
T COG4850 195 RQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQEFITNRNFPYGPLLLRRWGGVLDNIIESGAARKG----QSLRN 270 (373)
T ss_pred cCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHHHHHhcCCCCCCchhHhhcCCcccccccchhhhcc----cHHHH
Confidence 388999999999999987 8999999997665543333221 12234556555443333 33444
Q ss_pred HHHHcCCCCCcEEEEcCCH-hhHHH
Q 043738 268 AAQLLKFIPERCIVFGNSN-QTVEA 291 (368)
Q Consensus 268 ~le~lgi~p~~~l~IGDs~-nDl~~ 291 (368)
++..+ +-...+.|||+= .|.+.
T Consensus 271 il~~~--p~~kfvLVGDsGE~DpeI 293 (373)
T COG4850 271 ILRRY--PDRKFVLVGDSGEHDPEI 293 (373)
T ss_pred HHHhC--CCceEEEecCCCCcCHHH
Confidence 55544 345789999865 88543
No 258
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=66.87 E-value=4.6 Score=40.08 Aligned_cols=28 Identities=18% Similarity=0.087 Sum_probs=19.7
Q ss_pred HcCCCCCcEE-EEcCCHhhHHHHHHcCCe
Q 043738 271 LLKFIPERCI-VFGNSNQTVEAAHDARMK 298 (368)
Q Consensus 271 ~lgi~p~~~l-~IGDs~nDl~~A~~aG~~ 298 (368)
.+.+.+.-.+ -||....|+.+-.++|+.
T Consensus 488 slf~e~~PFyAGFGNriTDvisY~~vgIp 516 (580)
T COG5083 488 SLFIEFDPFYAGFGNRITDVISYSNVGIP 516 (580)
T ss_pred HhhCcCChhhccccccchhheeeccccCC
Confidence 3444444333 688888999999998887
No 259
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=66.69 E-value=3.3 Score=38.05 Aligned_cols=14 Identities=21% Similarity=0.506 Sum_probs=12.1
Q ss_pred ceEEEEeccCcccc
Q 043738 118 WLGAIFEWEGVIIE 131 (368)
Q Consensus 118 ik~VIFDlDGTLid 131 (368)
-++++||+||||+.
T Consensus 3 ~~~l~lD~DGTL~~ 16 (244)
T TIGR00685 3 KRAFFFDYDGTLSE 16 (244)
T ss_pred cEEEEEecCccccC
Confidence 36899999999996
No 260
>PLN03017 trehalose-phosphatase
Probab=64.03 E-value=20 Score=35.17 Aligned_cols=47 Identities=19% Similarity=0.267 Sum_probs=27.5
Q ss_pred HHHHHHHHHcCcccc--ccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcC
Q 043738 231 KTLETAIDSIGIEEY--FTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGN 284 (368)
Q Consensus 231 ~~~~~~l~~~gl~~~--Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGD 284 (368)
..++.+++.+|+... .-.++.+++. .+.++|+.+-+. + ..-.|.||+
T Consensus 286 ~Av~~LL~~l~~~~~~~~~pvyiGDD~----TDEDaF~~L~~~-~--~G~gI~VG~ 334 (366)
T PLN03017 286 KALEFLLESLGFGNTNNVFPVYIGDDR----TDEDAFKMLRDR-G--EGFGILVSK 334 (366)
T ss_pred HHHHHHHHhcccccCCCceEEEeCCCC----ccHHHHHHHhhc-C--CceEEEECC
Confidence 456778888776532 1245666653 467888876542 1 123577774
No 261
>PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional
Probab=62.53 E-value=83 Score=28.96 Aligned_cols=85 Identities=14% Similarity=0.252 Sum_probs=55.3
Q ss_pred HHHHHh-CCCcEEEEcCCChH---HHHHHHHHc--CccccccEE-EeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcC
Q 043738 212 VNILMH-YKIPMALVSTHPRK---TLETAIDSI--GIEEYFTAI-VAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGN 284 (368)
Q Consensus 212 L~~Lk~-~Gi~vaivSn~~~~---~~~~~l~~~--gl~~~Fd~i-v~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGD 284 (368)
|.+... .++.+-+++++.+- .+....... .+. .|.+ +.+-. ..-|-|..-+.+++.-|++ |++|||
T Consensus 23 lDErAdRedI~vrv~gsGaKm~pe~~~~~~~~~~~~~~--pDf~i~isPN--~a~PGP~~ARE~l~~~~iP---~IvI~D 95 (277)
T PRK00994 23 LDERADREDIDVRVVGSGAKMGPEEVEEVVKKMLEEWK--PDFVIVISPN--PAAPGPKKAREILKAAGIP---CIVIGD 95 (277)
T ss_pred HHhhhcccCceEEEeccCCCCCHHHHHHHHHHHHHhhC--CCEEEEECCC--CCCCCchHHHHHHHhcCCC---EEEEcC
Confidence 334433 37889999887433 233222222 222 3333 33322 3456678889999998884 899999
Q ss_pred CH--hhHHHHHHcCCeEEEEc
Q 043738 285 SN--QTVEAAHDARMKCVAVA 303 (368)
Q Consensus 285 s~--nDl~~A~~aG~~~I~v~ 303 (368)
++ .+.+...+.|++.|.+.
T Consensus 96 ~p~~K~~d~l~~~g~GYIivk 116 (277)
T PRK00994 96 APGKKVKDAMEEQGLGYIIVK 116 (277)
T ss_pred CCccchHHHHHhcCCcEEEEe
Confidence 88 56789999999988887
No 262
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=62.12 E-value=13 Score=34.61 Aligned_cols=38 Identities=13% Similarity=0.319 Sum_probs=33.6
Q ss_pred ccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcc
Q 043738 206 TGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIE 243 (368)
Q Consensus 206 pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~ 243 (368)
+...+.|++++++|+++++.|+.+...+...++.+|+.
T Consensus 27 ~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 27 QPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence 34567899999999999999999999999999999885
No 263
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=60.79 E-value=10 Score=34.43 Aligned_cols=63 Identities=17% Similarity=0.134 Sum_probs=30.7
Q ss_pred CCCCHHHHHHHHHHcCCC---CCcEEEEcCCHhhHHHHHHcCCe-----EEEEcCCCCccccCCCcEEEcC
Q 043738 258 GKPDPEMFVYAAQLLKFI---PERCIVFGNSNQTVEAAHDARMK-----CVAVASKHPVYELGAADLVVRH 320 (368)
Q Consensus 258 ~KP~~~~~~~~le~lgi~---p~~~l~IGDs~nDl~~A~~aG~~-----~I~v~~~~~~~~~~~ad~vv~s 320 (368)
...|..++..+++.++.. +.-++|+||..+|-.|...+.-. .+.|........-..|+|-+++
T Consensus 163 ~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 163 GVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp T--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES-----------------
T ss_pred CCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccccccccccccccc
Confidence 334688999999998876 78899999999999998886542 3444433221222236665544
No 264
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=58.97 E-value=29 Score=31.31 Aligned_cols=40 Identities=13% Similarity=0.306 Sum_probs=31.1
Q ss_pred cCccHHHHHHHHHhCCCcEEEEcCCChHHH---HHHHHHcCcc
Q 043738 204 LRTGSKEFVNILMHYKIPMALVSTHPRKTL---ETAIDSIGIE 243 (368)
Q Consensus 204 ~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~---~~~l~~~gl~ 243 (368)
..||..+.|+.|+.++.++-++||...+.- ...|.++|++
T Consensus 24 avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 24 AVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred cCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 458999999999988899999999765544 4455566765
No 265
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=58.42 E-value=12 Score=33.08 Aligned_cols=72 Identities=19% Similarity=0.152 Sum_probs=32.2
Q ss_pred HHHHHHHhCCCcEEEEcCCChHHHHHHHHHcC-----ccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcC
Q 043738 210 EFVNILMHYKIPMALVSTHPRKTLETAIDSIG-----IEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGN 284 (368)
Q Consensus 210 elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~g-----l~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGD 284 (368)
.+|..+++.|++++++.+...........+++ +...||.|+..++ .-..-+.++|++++++.+.||
T Consensus 109 nll~~a~~~~ip~~LvNarls~~s~~~~~~~~~~~r~~l~~f~~i~aqs~---------~da~r~~~lG~~~~~v~v~Gn 179 (186)
T PF04413_consen 109 NLLREAKRRGIPVVLVNARLSERSFRRYRRFPFLFRPLLSRFDRILAQSE---------ADAERFRKLGAPPERVHVTGN 179 (186)
T ss_dssp HHHHH-----S-EEEEEE--------------HHHHHHGGG-SEEEESSH---------HHHHHHHTTT-S--SEEE---
T ss_pred HHHHHHhhcCCCEEEEeeeeccccchhhhhhHHHHHHHHHhCCEEEECCH---------HHHHHHHHcCCCcceEEEeCc
Confidence 48888999999999998865443322222221 3356888887753 345667789999999999999
Q ss_pred CHhhHH
Q 043738 285 SNQTVE 290 (368)
Q Consensus 285 s~nDl~ 290 (368)
--.|..
T Consensus 180 lKfd~~ 185 (186)
T PF04413_consen 180 LKFDQA 185 (186)
T ss_dssp GGG---
T ss_pred chhccc
Confidence 777653
No 266
>cd05007 SIS_Etherase N-acetylmuramic acid 6-phosphate etherase. Members of this family contain the SIS (Sugar ISomerase) domain. The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. The bacterial cell wall sugar N-acetylmuramic acid carries a unique D-lactyl ether substituent at the C3 position. The etherase catalyzes the cleavage of the lactyl ether bond of N-acetylmuramic acid 6-phosphate.
Probab=57.21 E-value=1.6e+02 Score=27.23 Aligned_cols=107 Identities=13% Similarity=0.100 Sum_probs=59.7
Q ss_pred HHHHHHhCCCcEEEEcCCChHHHH-----HHHHHcCcc-ccccEEEeCCCC------CCCCCCHHHHHHHHHHcCCCCCc
Q 043738 211 FVNILMHYKIPMALVSTHPRKTLE-----TAIDSIGIE-EYFTAIVAAEDV------HRGKPDPEMFVYAAQLLKFIPER 278 (368)
Q Consensus 211 lL~~Lk~~Gi~vaivSn~~~~~~~-----~~l~~~gl~-~~Fd~iv~~e~v------~~~KP~~~~~~~~le~lgi~p~~ 278 (368)
+.+.++ +|-++.++..+....+- .....+|.. ..+..++.+.+. ....-+++.....+...++.+.+
T Consensus 42 ~~~~l~-~ggrl~~~GaGtSg~la~~da~e~~~tfg~~~~~v~~~iagg~~a~~~a~~~~edd~~~~~~~l~a~~l~~~D 120 (257)
T cd05007 42 AAERLR-AGGRLIYVGAGTSGRLGVLDASELPPTFGTPPERVVGLIAGGEPALTRAVEGAEDDEEAGAADLQAINLTERD 120 (257)
T ss_pred HHHHHH-cCCEEEEEcCcHHHHHHHHHHHhccccccCCcccceEEEeCCHHHHHhhccccCChHHHHHHHHHHcCCCCCC
Confidence 444444 45677777666544332 233345553 234444444321 22233456677777788888877
Q ss_pred EEEE-c---CCH---hhHHHHHHcCCeEEEEcCCCCccccCCCcEEE
Q 043738 279 CIVF-G---NSN---QTVEAAHDARMKCVAVASKHPVYELGAADLVV 318 (368)
Q Consensus 279 ~l~I-G---Ds~---nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv 318 (368)
++++ . .+. .=++.|++.|+++|.+.+.....-...+|+++
T Consensus 121 vvI~IS~SG~T~~vi~al~~Ak~~Ga~~I~It~~~~s~L~~~aD~~I 167 (257)
T cd05007 121 VVIGIAASGRTPYVLGALRYARARGALTIGIACNPGSPLLQLADIAI 167 (257)
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHCCCeEEEEECCCCChhHHhCCEEE
Confidence 7633 2 222 23778888999999998654433223356555
No 267
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=57.02 E-value=7.8 Score=33.44 Aligned_cols=18 Identities=11% Similarity=0.400 Sum_probs=14.9
Q ss_pred CCceEEEEeccCccccCc
Q 043738 116 CGWLGAIFEWEGVIIEDN 133 (368)
Q Consensus 116 ~~ik~VIFDlDGTLid~~ 133 (368)
.++++|++|+||||+...
T Consensus 23 ~~v~~vv~D~Dgtl~~~~ 40 (170)
T TIGR01668 23 VGIKGVVLDKDNTLVYPD 40 (170)
T ss_pred CCCCEEEEecCCccccCC
Confidence 468999999999999543
No 268
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=55.15 E-value=1.4e+02 Score=27.65 Aligned_cols=97 Identities=9% Similarity=0.045 Sum_probs=65.0
Q ss_pred cccCccHHHHHHHHHhC---CCcEEEEcCCChHHHHHHHHHcCcccccc--EEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 043738 202 YRLRTGSKEFVNILMHY---KIPMALVSTHPRKTLETAIDSIGIEEYFT--AIVAAEDVHRGKPDPEMFVYAAQLLKFIP 276 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~---Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd--~iv~~e~v~~~KP~~~~~~~~le~lgi~p 276 (368)
..+.|+..++++..+.. |+.+.-+++.+....+.+.+ +|....-- .-+++ +.+.-+++.++.+.+..++
T Consensus 103 ~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~-~G~~~vmPlg~pIGs---g~Gi~~~~~I~~I~e~~~v-- 176 (248)
T cd04728 103 KTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLED-AGCAAVMPLGSPIGS---GQGLLNPYNLRIIIERADV-- 176 (248)
T ss_pred cccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH-cCCCEeCCCCcCCCC---CCCCCCHHHHHHHHHhCCC--
Confidence 46788999998888776 99998677766565555444 45432211 22222 2344458888888887543
Q ss_pred CcEEEEcC---CHhhHHHHHHcCCeEEEEcCCC
Q 043738 277 ERCIVFGN---SNQTVEAAHDARMKCVAVASKH 306 (368)
Q Consensus 277 ~~~l~IGD---s~nDl~~A~~aG~~~I~v~~~~ 306 (368)
.+.+|- +..|+..|.+.|...|.+++.-
T Consensus 177 --pVI~egGI~tpeda~~AmelGAdgVlV~SAI 207 (248)
T cd04728 177 --PVIVDAGIGTPSDAAQAMELGADAVLLNTAI 207 (248)
T ss_pred --cEEEeCCCCCHHHHHHHHHcCCCEEEEChHh
Confidence 255554 4579999999999999998543
No 269
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=54.69 E-value=34 Score=32.84 Aligned_cols=19 Identities=21% Similarity=0.567 Sum_probs=15.0
Q ss_pred eEEEEeccCccccCcchHH
Q 043738 119 LGAIFEWEGVIIEDNPDLE 137 (368)
Q Consensus 119 k~VIFDlDGTLid~~~~i~ 137 (368)
-+++||+||+|+.....+.
T Consensus 36 fgfafDIDGVL~RG~~~i~ 54 (389)
T KOG1618|consen 36 FGFAFDIDGVLFRGHRPIP 54 (389)
T ss_pred eeEEEecccEEEecCCCCc
Confidence 4799999999998665443
No 270
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=51.85 E-value=1.7e+02 Score=28.34 Aligned_cols=97 Identities=9% Similarity=0.018 Sum_probs=66.7
Q ss_pred cccCccHHHHHHHHHhC---CCcEEEEcCCChHHHHHHHHHcCcccc--ccEEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 043738 202 YRLRTGSKEFVNILMHY---KIPMALVSTHPRKTLETAIDSIGIEEY--FTAIVAAEDVHRGKPDPEMFVYAAQLLKFIP 276 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~---Gi~vaivSn~~~~~~~~~l~~~gl~~~--Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p 276 (368)
..+.|+..++++..+.. |+.+.++++.+....+.+.+ +|-... .-.-++ .+.+-.+++.++.+.+...+
T Consensus 177 ~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~~-~g~~avmPl~~pIG---sg~gv~~p~~i~~~~e~~~v-- 250 (326)
T PRK11840 177 KTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLED-AGAVAVMPLGAPIG---SGLGIQNPYTIRLIVEGATV-- 250 (326)
T ss_pred CCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHh-cCCEEEeecccccc---CCCCCCCHHHHHHHHHcCCC--
Confidence 46788898988888776 99997777766666555444 443100 111222 23344489999999998543
Q ss_pred CcEEEEcCCH---hhHHHHHHcCCeEEEEcCCC
Q 043738 277 ERCIVFGNSN---QTVEAAHDARMKCVAVASKH 306 (368)
Q Consensus 277 ~~~l~IGDs~---nDl~~A~~aG~~~I~v~~~~ 306 (368)
-+.+|-+. .|+..|-+.|...+.++.+-
T Consensus 251 --pVivdAGIg~~sda~~AmelGadgVL~nSaI 281 (326)
T PRK11840 251 --PVLVDAGVGTASDAAVAMELGCDGVLMNTAI 281 (326)
T ss_pred --cEEEeCCCCCHHHHHHHHHcCCCEEEEccee
Confidence 37777654 79999999999999988553
No 271
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=49.99 E-value=10 Score=35.55 Aligned_cols=31 Identities=16% Similarity=0.327 Sum_probs=0.0
Q ss_pred CCCCCChhhhhcccCCCceEEEEeccCcccc
Q 043738 101 NPSLHNPLLRQERMGCGWLGAIFEWEGVIIE 131 (368)
Q Consensus 101 ~~~~~~~~~~~~~~~~~ik~VIFDlDGTLid 131 (368)
.+..............+.++++||+||||.+
T Consensus 1 ~~~~~~~~~~~~~~~a~~~~~~lDyDGTl~~ 31 (266)
T COG1877 1 TPALQSNQLLEPYLNARKRLLFLDYDGTLTE 31 (266)
T ss_pred ChhhhhhhhccccccccceEEEEeccccccc
No 272
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=49.58 E-value=90 Score=30.01 Aligned_cols=97 Identities=19% Similarity=0.275 Sum_probs=56.4
Q ss_pred HHHHHHHHHhC-CCc-EEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHc-CCCCCcEEEEcC
Q 043738 208 SKEFVNILMHY-KIP-MALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLL-KFIPERCIVFGN 284 (368)
Q Consensus 208 ~~elL~~Lk~~-Gi~-vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~l-gi~p~~~l~IGD 284 (368)
+..+++.|+++ ++. ..++|+.+......+++.+++...++..+.+......+--...+..+.+.+ ...|+=++..||
T Consensus 16 ~~p~~~~l~~~~~~~~~~~~tg~h~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDiv~~~gd 95 (365)
T TIGR00236 16 MAPLIRALKKYPEIDSYVIVTAQHREMLDQVLDLFHLPPDYDLNIMSPGQTLGEITSNMLEGLEELLLEEKPDIVLVQGD 95 (365)
T ss_pred HHHHHHHHhhCCCCCEEEEEeCCCHHHHHHHHHhcCCCCCeeeecCCCCCCHHHHHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 45678888875 444 466788887777888877887633333333211111111122223333322 234777888899
Q ss_pred CHhh---HHHHHHcCCeEEEEcC
Q 043738 285 SNQT---VEAAHDARMKCVAVAS 304 (368)
Q Consensus 285 s~nD---l~~A~~aG~~~I~v~~ 304 (368)
...- ..+|...|++++.+.+
T Consensus 96 ~~~~la~a~aa~~~~ipv~h~~~ 118 (365)
T TIGR00236 96 TTTTLAGALAAFYLQIPVGHVEA 118 (365)
T ss_pred chHHHHHHHHHHHhCCCEEEEeC
Confidence 7643 5566778999887753
No 273
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=49.15 E-value=10 Score=31.80 Aligned_cols=15 Identities=0% Similarity=0.266 Sum_probs=13.0
Q ss_pred eEEEEeccCccccCc
Q 043738 119 LGAIFEWEGVIIEDN 133 (368)
Q Consensus 119 k~VIFDlDGTLid~~ 133 (368)
+.+|+|+||||+.+.
T Consensus 3 ~~lvldld~tl~~~~ 17 (148)
T smart00577 3 KTLVLDLDETLVHST 17 (148)
T ss_pred cEEEEeCCCCeECCC
Confidence 579999999999864
No 274
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=48.16 E-value=33 Score=31.31 Aligned_cols=39 Identities=0% Similarity=-0.122 Sum_probs=32.4
Q ss_pred ccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccc
Q 043738 206 TGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEE 244 (368)
Q Consensus 206 pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~ 244 (368)
|.+.++++.++++|+.++++|+.+...++.+++.+++..
T Consensus 24 ~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~ 62 (249)
T TIGR01485 24 LRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLT 62 (249)
T ss_pred HHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCC
Confidence 344578888999999999999999999999988887653
No 275
>COG4996 Predicted phosphatase [General function prediction only]
Probab=47.81 E-value=9.2 Score=31.79 Aligned_cols=13 Identities=8% Similarity=0.376 Sum_probs=11.6
Q ss_pred EEEEeccCccccC
Q 043738 120 GAIFEWEGVIIED 132 (368)
Q Consensus 120 ~VIFDlDGTLid~ 132 (368)
+|+||.||||.|-
T Consensus 2 ~i~~d~d~t~wdh 14 (164)
T COG4996 2 AIVFDADKTLWDH 14 (164)
T ss_pred cEEEeCCCccccc
Confidence 6999999999973
No 276
>PRK00208 thiG thiazole synthase; Reviewed
Probab=46.55 E-value=2.3e+02 Score=26.26 Aligned_cols=97 Identities=9% Similarity=0.015 Sum_probs=64.1
Q ss_pred cccCccHHHHHHHHHhC---CCcEEEEcCCChHHHHHHHHHcCcccccc--EEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 043738 202 YRLRTGSKEFVNILMHY---KIPMALVSTHPRKTLETAIDSIGIEEYFT--AIVAAEDVHRGKPDPEMFVYAAQLLKFIP 276 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~---Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd--~iv~~e~v~~~KP~~~~~~~~le~lgi~p 276 (368)
..+.|+..++++..+.. |+.+.-+++.+....+.+. .+|....-- ..+++ +.+--+++.++.+.+..+++
T Consensus 103 ~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~l~-~~G~~~vmPlg~pIGs---g~gi~~~~~i~~i~e~~~vp- 177 (250)
T PRK00208 103 KTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLE-EAGCAAVMPLGAPIGS---GLGLLNPYNLRIIIEQADVP- 177 (250)
T ss_pred CCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HcCCCEeCCCCcCCCC---CCCCCCHHHHHHHHHhcCCe-
Confidence 46678888888888776 9998866666655554444 445442211 22232 23444588888888875443
Q ss_pred CcEEEEcCC---HhhHHHHHHcCCeEEEEcCCC
Q 043738 277 ERCIVFGNS---NQTVEAAHDARMKCVAVASKH 306 (368)
Q Consensus 277 ~~~l~IGDs---~nDl~~A~~aG~~~I~v~~~~ 306 (368)
+.+|-+ ..|+..+.+.|...|.+++.-
T Consensus 178 ---VIveaGI~tpeda~~AmelGAdgVlV~SAI 207 (250)
T PRK00208 178 ---VIVDAGIGTPSDAAQAMELGADAVLLNTAI 207 (250)
T ss_pred ---EEEeCCCCCHHHHHHHHHcCCCEEEEChHh
Confidence 555544 479999999999999998553
No 277
>PRK13762 tRNA-modifying enzyme; Provisional
Probab=45.37 E-value=72 Score=30.71 Aligned_cols=30 Identities=17% Similarity=0.068 Sum_probs=26.4
Q ss_pred ccccCccHHHHHHHHHhCCCcEEEEcCCCh
Q 043738 201 IYRLRTGSKEFVNILMHYKIPMALVSTHPR 230 (368)
Q Consensus 201 ~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~ 230 (368)
...++|.+.++++.+++.|+.+.+.||+..
T Consensus 140 EPlL~p~l~eli~~~k~~Gi~~~L~TNG~~ 169 (322)
T PRK13762 140 EPTLYPYLPELIEEFHKRGFTTFLVTNGTR 169 (322)
T ss_pred cccchhhHHHHHHHHHHcCCCEEEECCCCC
Confidence 346678999999999999999999999964
No 278
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=45.26 E-value=28 Score=31.61 Aligned_cols=44 Identities=11% Similarity=0.247 Sum_probs=28.8
Q ss_pred HHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeC
Q 043738 208 SKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAA 252 (368)
Q Consensus 208 ~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~ 252 (368)
|.++|..|++. +.|++||++.-..+..-+....+...||.++..
T Consensus 1 M~~~L~~L~~~-~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~e 44 (220)
T PF03332_consen 1 MAELLQKLRKK-VPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPE 44 (220)
T ss_dssp HHHHHHHHHTT-SEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEG
T ss_pred CHHHHHHHHhc-CeEEEEcchhHHHHHHHHcccchHhhCCeeecC
Confidence 57899999986 999999999766555444222344557766553
No 279
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=44.56 E-value=1.5e+02 Score=27.56 Aligned_cols=97 Identities=14% Similarity=0.134 Sum_probs=50.6
Q ss_pred cCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCC-----CC----------CC-HHHHHH
Q 043738 204 LRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHR-----GK----------PD-PEMFVY 267 (368)
Q Consensus 204 ~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~-----~K----------P~-~~~~~~ 267 (368)
-...+.++.+.+++.|-++.+.++. ..+...........++-.++..-++.. +- |- .+.=..
T Consensus 113 ~V~d~~ea~~~~~~~~~rVflt~G~--~~l~~f~~~~~~~~~~~Rvlp~~~~~~~~~~~~~p~~~Iia~~GPfs~~~n~a 190 (257)
T COG2099 113 EVADIEEAAEAAKQLGRRVFLTTGR--QNLAHFVAADAHSHVLARVLPPPDVLAKCEDLGVPPARIIAMRGPFSEEDNKA 190 (257)
T ss_pred EecCHHHHHHHHhccCCcEEEecCc--cchHHHhcCcccceEEEEEcCchHHHHHHHhcCCChhhEEEecCCcChHHHHH
Confidence 3455667777777766555555554 222222222222233433333221111 11 11 233345
Q ss_pred HHHHcCCCCCcEEEEcCCH------hhHHHHHHcCCeEEEEcCC
Q 043738 268 AAQLLKFIPERCIVFGNSN------QTVEAAHDARMKCVAVASK 305 (368)
Q Consensus 268 ~le~lgi~p~~~l~IGDs~------nDl~~A~~aG~~~I~v~~~ 305 (368)
++++++++ ++.-=||= -=+++|.++|+.+|+|...
T Consensus 191 ll~q~~id---~vItK~SG~~Gg~~~Ki~aA~eLgi~VI~I~Rp 231 (257)
T COG2099 191 LLEQYRID---VVVTKNSGGAGGTYEKIEAARELGIPVIMIERP 231 (257)
T ss_pred HHHHhCCC---EEEEccCCcccCcHHHHHHHHHcCCcEEEEecC
Confidence 66777764 44433333 3499999999999999987
No 280
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=43.51 E-value=99 Score=28.61 Aligned_cols=118 Identities=17% Similarity=0.215 Sum_probs=68.3
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHH-HcCccccccEEEeCCCCCCCCC-----------CHHHHHHHH
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAID-SIGIEEYFTAIVAAEDVHRGKP-----------DPEMFVYAA 269 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~-~~gl~~~Fd~iv~~e~v~~~KP-----------~~~~~~~~l 269 (368)
........++++.+.+.+...+++|.+.+. +..... ...-..+|-.++...+...+-| ..+.=..++
T Consensus 112 ~~~v~~~~eA~~~l~~~~~~~iflttGsk~-L~~f~~~~~~~~r~~~RvLp~~~~~~g~~~~~iia~~GPfs~e~n~al~ 190 (249)
T PF02571_consen 112 WHYVDSYEEAAELLKELGGGRIFLTTGSKN-LPPFVPAPLPGERLFARVLPTPESALGFPPKNIIAMQGPFSKELNRALF 190 (249)
T ss_pred EEEeCCHHHHHHHHhhcCCCCEEEeCchhh-HHHHhhcccCCCEEEEEECCCccccCCCChhhEEEEeCCCCHHHHHHHH
Confidence 355677888888888877556666665433 333322 2222334444444333322211 133445677
Q ss_pred HHcCCCCCcEEEEcCC---H--hhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchhhhHH
Q 043738 270 QLLKFIPERCIVFGNS---N--QTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDELSVV 327 (368)
Q Consensus 270 e~lgi~p~~~l~IGDs---~--nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~ 327 (368)
++++++ +++-=|| - .=+++|++.|+.+|++.++...+. ..++.+++++...
T Consensus 191 ~~~~i~---~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP~~~~~----~~~~~~~~e~l~~ 246 (249)
T PF02571_consen 191 RQYGID---VLVTKESGGSGFDEKIEAARELGIPVIVIKRPPEPYG----DPVVETIEELLDW 246 (249)
T ss_pred HHcCCC---EEEEcCCCchhhHHHHHHHHHcCCeEEEEeCCCCCCC----CcccCCHHHHHHH
Confidence 777764 4444333 2 229999999999999998765543 3346788877543
No 281
>PF10113 Fibrillarin_2: Fibrillarin-like archaeal protein; InterPro: IPR016760 Members of this protein family are HmdC, whose gene regularly occurs in the context of genes for HmdA (5,10-methenyltetrahydromethanopterin hydrogenase) and the radical SAM protein HmdB involved in biosynthesis of the HmdA cofactor. Bioinformatics suggests this protein, a homologue of eukaryotic fibrillarin, may be involved in biosynthesis of the guanylyl pyridinol cofactor in HmdA.
Probab=43.48 E-value=49 Score=32.88 Aligned_cols=44 Identities=16% Similarity=0.074 Sum_probs=34.4
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCHhh----HHHHHHcCCeEEEEcCC
Q 043738 262 PEMFVYAAQLLKFIPERCIVFGNSNQT----VEAAHDARMKCVAVASK 305 (368)
Q Consensus 262 ~~~~~~~le~lgi~p~~~l~IGDs~nD----l~~A~~aG~~~I~v~~~ 305 (368)
.+-...+++++|--.+-+++|||++.| ++++.+.|..++.+-++
T Consensus 208 ~~~Va~~Akk~gkGveaI~~vGDGyddLI~G~~a~id~~vDvfVvEGg 255 (505)
T PF10113_consen 208 MEEVAELAKKYGKGVEAIMHVGDGYDDLITGLKACIDMGVDVFVVEGG 255 (505)
T ss_pred HHHHHHHHHHhCCCceEEEEecCChHHHHHHHHHHHhcCCcEEEEeCC
Confidence 445678889999889999999999977 56666678877776643
No 282
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=42.56 E-value=1.3e+02 Score=31.14 Aligned_cols=86 Identities=14% Similarity=0.089 Sum_probs=49.4
Q ss_pred HHHHHHHHHhCCCcEEEEcCCCh-HHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCH
Q 043738 208 SKEFVNILMHYKIPMALVSTHPR-KTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSN 286 (368)
Q Consensus 208 ~~elL~~Lk~~Gi~vaivSn~~~-~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~ 286 (368)
+...|...+..+-++++++-... ..++.+-.-+++.-..-.+...++ ......-++..|+. ++|||+.
T Consensus 86 il~al~~a~~~~~~ia~vg~~~~~~~~~~~~~ll~~~i~~~~~~~~~e-------~~~~~~~l~~~G~~----~viG~~~ 154 (526)
T TIGR02329 86 VMQALARARRIASSIGVVTHQDTPPALRRFQAAFNLDIVQRSYVTEED-------ARSCVNDLRARGIG----AVVGAGL 154 (526)
T ss_pred HHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCceEEEEecCHHH-------HHHHHHHHHHCCCC----EEECChH
Confidence 34445555666778888877533 334444445555411112212222 22233334445654 8889996
Q ss_pred hhHHHHHHcCCeEEEEcCC
Q 043738 287 QTVEAAHDARMKCVAVASK 305 (368)
Q Consensus 287 nDl~~A~~aG~~~I~v~~~ 305 (368)
. ...|+++||+.|.+.++
T Consensus 155 ~-~~~A~~~gl~~ili~s~ 172 (526)
T TIGR02329 155 I-TDLAEQAGLHGVFLYSA 172 (526)
T ss_pred H-HHHHHHcCCceEEEecH
Confidence 5 67899999999998864
No 283
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=42.48 E-value=2.8e+02 Score=25.69 Aligned_cols=61 Identities=13% Similarity=0.139 Sum_probs=39.2
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCC------HhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchhhhHHHHh
Q 043738 263 EMFVYAAQLLKFIPERCIVFGNS------NQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDELSVVDLK 330 (368)
Q Consensus 263 ~~~~~~le~lgi~p~~~l~IGDs------~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~l~ 330 (368)
+.=..++++++++ +++-=|| ..=+++|.+.|+.+|++.++...+ ...++.+++++...+.+
T Consensus 187 e~n~al~~~~~i~---~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~~~----~~~~~~~~~el~~~l~~ 253 (256)
T TIGR00715 187 ELEKALLREYRID---AVVTKASGEQGGELEKVKAAEALGINVIRIARPQTIP----GVAIFDDISQLNQFVAR 253 (256)
T ss_pred HHHHHHHHHcCCC---EEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCCCCC----CCccCCCHHHHHHHHHH
Confidence 3345666677764 4444333 234899999999999998775422 24566888888655443
No 284
>PTZ00174 phosphomannomutase; Provisional
Probab=40.83 E-value=42 Score=30.72 Aligned_cols=36 Identities=8% Similarity=0.123 Sum_probs=30.1
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHH
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAID 238 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~ 238 (368)
.+.+...+.|+.++++|+.++++||.+...+...++
T Consensus 22 ~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~ 57 (247)
T PTZ00174 22 PITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLG 57 (247)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHh
Confidence 456677899999999999999999998877766555
No 285
>PF02593 dTMP_synthase: Thymidylate synthase; InterPro: IPR003745 This entry describes proteins of unknown function.
Probab=40.54 E-value=42 Score=30.44 Aligned_cols=93 Identities=16% Similarity=0.136 Sum_probs=64.7
Q ss_pred cccCccHH-HHHHHHHhCCCcEEEEcCCChH-----HHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 043738 202 YRLRTGSK-EFVNILMHYKIPMALVSTHPRK-----TLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFI 275 (368)
Q Consensus 202 ~~~~pg~~-elL~~Lk~~Gi~vaivSn~~~~-----~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~ 275 (368)
+.+.|++. ++.+.+++.|++..|+...... .++..++.+|+.-.|...+|+-+- ..-..+...++++|-+
T Consensus 58 y~lHPDl~~~l~~~~~e~g~kavIvp~~~~~~g~~~~lk~~~e~~gi~~~~P~~~CsL~~----~~~p~i~~F~~~fGkP 133 (217)
T PF02593_consen 58 YGLHPDLTYELPEIAKEAGVKAVIVPSESPKPGLRRQLKKQLEEFGIEVEFPKPFCSLEE----NGNPQIDEFAEYFGKP 133 (217)
T ss_pred eccCchhHHHHHHHHHHcCCCEEEEecCCCccchHHHHHHHHHhcCceeecCccccccCC----CCChhHHHHHHHhCCc
Confidence 46778875 6777788899999998877666 888889999988888888887542 2234577888889976
Q ss_pred CCcEEEEcCCHhhHHHHHHcCCe
Q 043738 276 PERCIVFGNSNQTVEAAHDARMK 298 (368)
Q Consensus 276 p~~~l~IGDs~nDl~~A~~aG~~ 298 (368)
.=++.+=+|...|++..+.+-++
T Consensus 134 ~~ei~v~~~~I~~V~VlR~aPCG 156 (217)
T PF02593_consen 134 KVEIEVENGKIKDVKVLRSAPCG 156 (217)
T ss_pred eEEEEecCCcEEEEEEEecCCCc
Confidence 54444333344555555555443
No 286
>TIGR01858 tag_bisphos_ald class II aldolase, tagatose bisphosphate family. This model describes tagatose-1,6-bisphosphate aldolases, and perhaps other closely related class II aldolases. This tetrameric, Zn2+-dependent enzyme is related to the class II fructose bisphosphate aldolase; fructose 1,6-bisphosphate and tagatose 1,6 bisphosphate differ only in chirality at C4.
Probab=39.41 E-value=2.3e+02 Score=26.82 Aligned_cols=98 Identities=9% Similarity=0.058 Sum_probs=61.6
Q ss_pred HHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCC-CCCC---CHHHHHHHHHHcCCCCCcEEEE-
Q 043738 208 SKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVH-RGKP---DPEMFVYAAQLLKFIPERCIVF- 282 (368)
Q Consensus 208 ~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~-~~KP---~~~~~~~~le~lgi~p~~~l~I- 282 (368)
++++|+..++.|+-+..+.-.+.+.++..++...-.. -..|+...... ..-+ -..+...++++..++ =++..
T Consensus 4 ~k~ll~~A~~~~yAV~AfN~~n~e~~~avi~AAee~~-sPvIlq~s~~~~~~~~~~~~~~~~~~~a~~~~VP--ValHLD 80 (282)
T TIGR01858 4 TKYMLQDAQAGGYAVPAFNIHNLETIQAVVETAAEMR-SPVILAGTPGTFKHAGTEYIVALCSAASTTYNMP--LALHLD 80 (282)
T ss_pred HHHHHHHHHHcCCeEEEEEeCCHHHHHHHHHHHHHhC-CCEEEEeCccHHhhCCHHHHHHHHHHHHHHCCCC--EEEECC
Confidence 6788999999999998888878888888887543211 12233222111 1111 123455666676664 22333
Q ss_pred -cCCHhhHHHHHHcCCeEEEEcCCCCc
Q 043738 283 -GNSNQTVEAAHDARMKCVAVASKHPV 308 (368)
Q Consensus 283 -GDs~nDl~~A~~aG~~~I~v~~~~~~ 308 (368)
|.+..++..|-++|+.+||+.+.+..
T Consensus 81 Hg~~~e~i~~ai~~GFtSVM~DgS~lp 107 (282)
T TIGR01858 81 HHESLDDIRQKVHAGVRSAMIDGSHFP 107 (282)
T ss_pred CCCCHHHHHHHHHcCCCEEeecCCCCC
Confidence 34556788999999999999977643
No 287
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=39.05 E-value=32 Score=33.46 Aligned_cols=19 Identities=5% Similarity=-0.139 Sum_probs=16.2
Q ss_pred CCceEEEEeccCccccCcc
Q 043738 116 CGWLGAIFEWEGVIIEDNP 134 (368)
Q Consensus 116 ~~ik~VIFDlDGTLid~~~ 134 (368)
..|+++-||||.||+....
T Consensus 10 ~~i~~~GFDmDyTLa~Y~~ 28 (343)
T TIGR02244 10 EKIQVFGFDMDYTLAQYKS 28 (343)
T ss_pred ccCCEEEECccccccccCh
Confidence 4689999999999997654
No 288
>PLN02887 hydrolase family protein
Probab=38.43 E-value=47 Score=34.78 Aligned_cols=41 Identities=2% Similarity=0.165 Sum_probs=36.6
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcc
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIE 243 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~ 243 (368)
.+.+...+.|++++++|+.+++.||.+...+...++.+++.
T Consensus 325 ~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~l~ 365 (580)
T PLN02887 325 QISETNAKALKEALSRGVKVVIATGKARPAVIDILKMVDLA 365 (580)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCcc
Confidence 56677899999999999999999999999998899988864
No 289
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=38.37 E-value=51 Score=35.15 Aligned_cols=42 Identities=12% Similarity=0.245 Sum_probs=35.8
Q ss_pred cCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcccc
Q 043738 204 LRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEY 245 (368)
Q Consensus 204 ~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~ 245 (368)
..+...+.|+.++++|++++++|+.....+...++.+++..+
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~~~ 475 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIKDP 475 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCe
Confidence 345678899999999999999999999999999999887543
No 290
>PF03603 DNA_III_psi: DNA polymerase III psi subunit; InterPro: IPR004615 DNA-directed DNA polymerase (2.7.7.7 from EC) catalyzes DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The enzyme also has 3' to 5' exonuclease activity. It has a core composed of alpha, epsilon and theta chains, that associate with a tau subunit which allows the core dimerization to form the PolIII' complex. PolIII' associates with the gamma complex (gamma, delta, delta', psi and chi chains) and with the beta chain. This family is the psi subunit, the small subunit of the DNA polymerase III holoenzyme in Escherichia coli and related species, whose exact function is not known. It appears to have a narrow taxonomic distribution, being restricted to the gammaproteobacteria.; GO: 0003887 DNA-directed DNA polymerase activity, 0008408 3'-5' exonuclease activity, 0006260 DNA replication; PDB: 1EM8_B 3GLI_O 3SXU_B.
Probab=38.01 E-value=78 Score=26.15 Aligned_cols=106 Identities=16% Similarity=0.178 Sum_probs=51.4
Q ss_pred HHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHH
Q 043738 214 ILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAH 293 (368)
Q Consensus 214 ~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~ 293 (368)
.|.+.|+..+.+..-. .... .....+......++.+++..... .+ .|..++..+++.+++++++-=. .+.+..
T Consensus 8 ~LqeMGItqW~Lr~P~--~L~g-~~~i~lp~~~rLliVs~~~p~~~-~~-L~~dVLrsl~L~~~q~~~ltpe--q~~~L~ 80 (128)
T PF03603_consen 8 LLQEMGITQWQLRRPE--VLQG-EIAISLPESCRLLIVSDELPQLD-DP-LFQDVLRSLKLTPEQVLHLTPE--QLAMLP 80 (128)
T ss_dssp HHHHCT--EEEES-GG--GTS---S-----TT--EEEE-SS---TT-SH-HHHHHHHHTT--GGGEEEE-CC--GGGGS-
T ss_pred HHHHcCCCeEEeCCcc--ccCC-CccccCcccceEEEEeCCCCCcc-Ch-HHHHHHHHcCCCHHHhhccCHH--HHhhCc
Confidence 4677788888887741 1111 12223445566677777654332 34 9999999999999999998532 333444
Q ss_pred HcCCeEEEEcCCCCccccCCCcEEEcCchhhhH
Q 043738 294 DARMKCVAVASKHPVYELGAADLVVRHLDELSV 326 (368)
Q Consensus 294 ~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~ 326 (368)
.-...-+|..|........+..+..+++++|..
T Consensus 81 ~~~~~~~W~lg~~~~~~~~~~~l~Sp~L~~L~~ 113 (128)
T PF03603_consen 81 EDHPCWCWFLGCEQQEILAGKQLQSPSLSELDQ 113 (128)
T ss_dssp TT-B-EEEEES--S--SSBS-EEEE--HHHHHH
T ss_pred CCCCCcEEEccCCCcccccceeecCcCHHHHhc
Confidence 444455777766665556667778888888843
No 291
>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=37.76 E-value=92 Score=30.49 Aligned_cols=80 Identities=16% Similarity=0.208 Sum_probs=56.0
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCC-CCCCCHHHHHHHHHHcCCCCCcEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVH-RGKPDPEMFVYAAQLLKFIPERCI 280 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~-~~KP~~~~~~~~le~lgi~p~~~l 280 (368)
..-.||+.-||..+... +.++++|....-++..+++.+.=..++..-+..+... ..-++ ..=+.+++-++++++
T Consensus 213 f~kRPgvD~FL~~~a~~-yEIVi~sse~gmt~~pl~d~lDP~g~IsYkLfr~~t~y~~G~H----vKdls~LNRdl~kVi 287 (393)
T KOG2832|consen 213 FKKRPGVDYFLGHLAKY-YEIVVYSSEQGMTVFPLLDALDPKGYISYKLFRGATKYEEGHH----VKDLSKLNRDLQKVI 287 (393)
T ss_pred eccCchHHHHHHhhccc-ceEEEEecCCccchhhhHhhcCCcceEEEEEecCcccccCccc----hhhhhhhccccceeE
Confidence 46789999999999955 9999999998888888888876555555433332211 11111 223677899999999
Q ss_pred EEcCCH
Q 043738 281 VFGNSN 286 (368)
Q Consensus 281 ~IGDs~ 286 (368)
+|+=..
T Consensus 288 vVd~d~ 293 (393)
T KOG2832|consen 288 VVDFDA 293 (393)
T ss_pred EEEccc
Confidence 998443
No 292
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=37.75 E-value=17 Score=31.19 Aligned_cols=15 Identities=0% Similarity=0.266 Sum_probs=12.6
Q ss_pred eEEEEeccCccccCc
Q 043738 119 LGAIFEWEGVIIEDN 133 (368)
Q Consensus 119 k~VIFDlDGTLid~~ 133 (368)
+.+++|+|+||+-+.
T Consensus 2 ~~lvlDLDeTLi~~~ 16 (162)
T TIGR02251 2 KTLVLDLDETLVHST 16 (162)
T ss_pred cEEEEcCCCCcCCCC
Confidence 479999999999654
No 293
>PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function.; PDB: 2NN4_A.
Probab=37.54 E-value=24 Score=25.30 Aligned_cols=25 Identities=12% Similarity=0.080 Sum_probs=15.5
Q ss_pred HHHHHHHcCCCCCcEEEEcCCHhhHHHHH
Q 043738 265 FVYAAQLLKFIPERCIVFGNSNQTVEAAH 293 (368)
Q Consensus 265 ~~~~le~lgi~p~~~l~IGDs~nDl~~A~ 293 (368)
..++++++|+ .+++||...|+++..
T Consensus 7 VqQLLK~fG~----~IY~gdr~~DielM~ 31 (62)
T PF06014_consen 7 VQQLLKKFGI----IIYVGDRLWDIELME 31 (62)
T ss_dssp HHHHHHTTS---------S-HHHHHHHHH
T ss_pred HHHHHHHCCE----EEEeCChHHHHHHHH
Confidence 4677888886 699999999998865
No 294
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=37.24 E-value=94 Score=30.16 Aligned_cols=118 Identities=16% Similarity=0.184 Sum_probs=58.5
Q ss_pred HHHhC-CCcEEE-EcCCC--hHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcC-CCCCcEEEEcCCHhh
Q 043738 214 ILMHY-KIPMAL-VSTHP--RKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLK-FIPERCIVFGNSNQT 288 (368)
Q Consensus 214 ~Lk~~-Gi~vai-vSn~~--~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lg-i~p~~~l~IGDs~nD 288 (368)
.|+++ ++.+.+ +||.. ..+-....+.+++ ...+..+..+.....+--..++..+.+.+. ..|+-+++.||...=
T Consensus 2 ~l~~~~~~~~~li~tG~H~~~~~g~~~~~~f~i-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~Pd~Vlv~GD~~~~ 80 (346)
T PF02350_consen 2 ALQKDPGFELILIVTGQHLDPEMGDTFFEGFGI-PKPDYLLDSDSQSMAKSTGLAIIELADVLEREKPDAVLVLGDRNEA 80 (346)
T ss_dssp HHHCSTTEEEEEEEECSS--CHHHHHHHHHTT---SEEEE--STTS-HHHHHHHHHHHHHHHHHHHT-SEEEEETTSHHH
T ss_pred hhhhCCCCCEEEEEeCCCCCHHHHHHHHhhCCC-CCCCcccccccchHHHHHHHHHHHHHHHHHhcCCCEEEEEcCCchH
Confidence 45554 555544 57765 5666677777777 556666664432222222223333333322 378999999999965
Q ss_pred ---HHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchhhhHHHHhccccccc
Q 043738 289 ---VEAAHDARMKCVAVASKHPVYELGAADLVVRHLDELSVVDLKNLADIES 337 (368)
Q Consensus 289 ---l~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~l~~L~d~~~ 337 (368)
..+|...+++++.+.+|-...+... ...+|..-....+|+++-+
T Consensus 81 la~alaA~~~~ipv~HieaGlRs~d~~~-----g~~de~~R~~i~~la~lhf 127 (346)
T PF02350_consen 81 LAAALAAFYLNIPVAHIEAGLRSGDRTE-----GMPDEINRHAIDKLAHLHF 127 (346)
T ss_dssp HHHHHHHHHTT-EEEEES-----S-TTS-----STTHHHHHHHHHHH-SEEE
T ss_pred HHHHHHHHHhCCCEEEecCCCCccccCC-----CCchhhhhhhhhhhhhhhc
Confidence 4456667999988886621111110 1345555555555555433
No 295
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=37.21 E-value=68 Score=28.89 Aligned_cols=39 Identities=3% Similarity=0.092 Sum_probs=30.2
Q ss_pred HHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEe
Q 043738 211 FVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVA 251 (368)
Q Consensus 211 lL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~ 251 (368)
.++ ++++|++++++|+.+...+...++.+++. ..+.+++
T Consensus 23 ~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~-~~~~~I~ 61 (236)
T TIGR02471 23 LLR-GSGDAVGFGIATGRSVESAKSRYAKLNLP-SPDVLIA 61 (236)
T ss_pred HHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCC-CCCEEEE
Confidence 444 47779999999999999999999998875 2344444
No 296
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=36.73 E-value=88 Score=30.19 Aligned_cols=87 Identities=18% Similarity=0.238 Sum_probs=55.3
Q ss_pred cccCccHHHHHHHHHhC----CCcEEEEcCCChH----HHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcC
Q 043738 202 YRLRTGSKEFVNILMHY----KIPMALVSTHPRK----TLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLK 273 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~----Gi~vaivSn~~~~----~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lg 273 (368)
-.+.||+.+.|+.|.++ .++.+++||+... .+..+-+.+|+.---|.++-+. ..|+.+.+.
T Consensus 50 ~~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~lS~~Lgv~Vs~dqviqSH---------sP~r~l~~~-- 118 (389)
T KOG1618|consen 50 HRPIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQELSALLGVEVSADQVIQSH---------SPFRLLVEY-- 118 (389)
T ss_pred CCCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHHHHhhCCccCHHHHHhhc---------ChHHHHhhh--
Confidence 37889999999999887 7999999997433 2333334556552223333221 235555522
Q ss_pred CCCCcEEEEcCCHhhHHHHHHcCCeEEE
Q 043738 274 FIPERCIVFGNSNQTVEAAHDARMKCVA 301 (368)
Q Consensus 274 i~p~~~l~IGDs~nDl~~A~~aG~~~I~ 301 (368)
.-++++++|++. --+.|+..|.+.|.
T Consensus 119 -~~k~vLv~G~~~-vr~vAegyGFk~Vv 144 (389)
T KOG1618|consen 119 -HYKRVLVVGQGS-VREVAEGYGFKNVV 144 (389)
T ss_pred -hhceEEEecCCc-HHHHhhccCcccee
Confidence 347899999543 35567888888544
No 297
>TIGR03470 HpnH hopanoid biosynthesis associated radical SAM protein HpnH. The sequences represented by this model are members of the radical SAM superfamily of enzymes (pfam04055). These enzymes utilize an iron-sulfur redox cluster and S-adenosylmethionine to carry out diverse radical mediated reactions. The members of this clade are frequently found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. The linkage between SHC and this radical SAM enzyme is strong; one is nearly always observed in the same genome where the other is found. A hopanoid biosynthesis locus was described in Zymomonas mobilis consisting of the genes HpnA-E and SHC (HpnF). Continuing past SHC are found a phosphorylase enzyme (ZMO0873, i.e. HpnG, TIGR03468) and this radical SAM enzyme (ZMO0874) which we name here HpnH. Granted, in Z. mobilis, HpnH is in a convergent orientation with respect to HpnA-G, but one gene beyond HpnH
Probab=36.56 E-value=3.7e+02 Score=25.62 Aligned_cols=31 Identities=26% Similarity=0.155 Sum_probs=26.8
Q ss_pred CCccccCccHHHHHHHHHhCCCcEEEEcCCC
Q 043738 199 GGIYRLRTGSKEFVNILMHYKIPMALVSTHP 229 (368)
Q Consensus 199 ~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~ 229 (368)
++...+.|.+.++++.+++.|..+.+.||+.
T Consensus 80 GGEPLL~pdl~eiv~~~~~~g~~v~l~TNG~ 110 (318)
T TIGR03470 80 GGEPLLHPEIDEIVRGLVARKKFVYLCTNAL 110 (318)
T ss_pred CccccccccHHHHHHHHHHcCCeEEEecCce
Confidence 3446778999999999999999999999985
No 298
>PRK10076 pyruvate formate lyase II activase; Provisional
Probab=36.53 E-value=1.2e+02 Score=27.34 Aligned_cols=36 Identities=11% Similarity=0.181 Sum_probs=26.7
Q ss_pred ccCcc-HHHHHHHHHhCCCcEEEEcCCCh--HHHHHHHH
Q 043738 203 RLRTG-SKEFVNILMHYKIPMALVSTHPR--KTLETAID 238 (368)
Q Consensus 203 ~~~pg-~~elL~~Lk~~Gi~vaivSn~~~--~~~~~~l~ 238 (368)
.+.++ +.++++.+++.|+.+++.||+.. .....++.
T Consensus 50 llq~~fl~~l~~~~k~~gi~~~leTnG~~~~~~~~~l~~ 88 (213)
T PRK10076 50 LMQAEFATRFLQRLRLWGVSCAIETAGDAPASKLLPLAK 88 (213)
T ss_pred HcCHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHH
Confidence 44556 57999999999999999999843 34444444
No 299
>PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences. ThiG, together with ThiF and ThiH, is proposed to be involved in the synthesis of 4-methyl-5-(b-hydroxyethyl)thiazole (THZ) which is an intermediate in the thiazole production pathway [].; GO: 0009228 thiamine biosynthetic process; PDB: 1WV2_B 1TYG_C 1XM3_B 2HTM_C 2YZR_C.
Probab=36.07 E-value=3.5e+02 Score=24.95 Aligned_cols=96 Identities=11% Similarity=0.088 Sum_probs=58.5
Q ss_pred cccCccHHHHHHH---HHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeC-CCCCCCCCCHHHHHHHHHHcCCCCC
Q 043738 202 YRLRTGSKEFVNI---LMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAA-EDVHRGKPDPEMFVYAAQLLKFIPE 277 (368)
Q Consensus 202 ~~~~pg~~elL~~---Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~-e~v~~~KP~~~~~~~~le~lgi~p~ 277 (368)
..+.|+..++++. |.+.|+.|.-+++.+....+ .+...|.... .-.++ -..+.+--++..++.+.++.+++
T Consensus 103 ~~L~PD~~etl~Aae~Lv~eGF~VlPY~~~D~v~ak-rL~d~Gcaav--MPlgsPIGSg~Gi~n~~~l~~i~~~~~vP-- 177 (247)
T PF05690_consen 103 KTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAK-RLEDAGCAAV--MPLGSPIGSGRGIQNPYNLRIIIERADVP-- 177 (247)
T ss_dssp TT--B-HHHHHHHHHHHHHTT-EEEEEE-S-HHHHH-HHHHTT-SEB--EEBSSSTTT---SSTHHHHHHHHHHGSSS--
T ss_pred CCcCCChhHHHHHHHHHHHCCCEEeecCCCCHHHHH-HHHHCCCCEE--EecccccccCcCCCCHHHHHHHHHhcCCc--
Confidence 4667887777654 56789999999998755554 4455554311 01111 12356677899999999999775
Q ss_pred cEEEEcCC---HhhHHHHHHcCCeEEEEcC
Q 043738 278 RCIVFGNS---NQTVEAAHDARMKCVAVAS 304 (368)
Q Consensus 278 ~~l~IGDs---~nDl~~A~~aG~~~I~v~~ 304 (368)
+.|+-+ .+|...|-+.|+..|.++.
T Consensus 178 --vIvDAGiG~pSdaa~AMElG~daVLvNT 205 (247)
T PF05690_consen 178 --VIVDAGIGTPSDAAQAMELGADAVLVNT 205 (247)
T ss_dssp --BEEES---SHHHHHHHHHTT-SEEEESH
T ss_pred --EEEeCCCCCHHHHHHHHHcCCceeehhh
Confidence 555544 4899999999999999983
No 300
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=36.05 E-value=1.1e+02 Score=29.12 Aligned_cols=24 Identities=13% Similarity=0.229 Sum_probs=20.5
Q ss_pred ccHHHHHHHHHhCCCcEEEEcCCC
Q 043738 206 TGSKEFVNILMHYKIPMALVSTHP 229 (368)
Q Consensus 206 pg~~elL~~Lk~~Gi~vaivSn~~ 229 (368)
+|+..+-+.|+..|..+.++|...
T Consensus 63 ~GA~aLa~aL~~lG~~~~ivtd~~ 86 (291)
T PF14336_consen 63 PGAAALARALQALGKEVVIVTDER 86 (291)
T ss_pred HHHHHHHHHHHHcCCeEEEEECHH
Confidence 678888889999999999999853
No 301
>PRK06100 DNA polymerase III subunit psi; Provisional
Probab=35.74 E-value=1.7e+02 Score=24.25 Aligned_cols=108 Identities=10% Similarity=0.057 Sum_probs=65.2
Q ss_pred HHHHhCCCcEEEEcCCChHHHHH-HHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHH
Q 043738 213 NILMHYKIPMALVSTHPRKTLET-AIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEA 291 (368)
Q Consensus 213 ~~Lk~~Gi~vaivSn~~~~~~~~-~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~ 291 (368)
..|.+.|+.-+.+.... ...- -.....+.+-...++.+++.. ..-++-+|..++..+++++++|+++- ...+.+
T Consensus 7 ~~LqqMGItqW~Lr~P~--~L~g~e~~~i~lp~~~rLliV~~~~p-~~~~~~L~~dVLrsm~l~~~q~~~lt--~eq~~~ 81 (132)
T PRK06100 7 QYLQEMGISQWELIHPE--RLAGYQPPTQDLDSDCKLLLVAPQCP-QNETALLFERILKSMQLELSQARHIE--PEQLSQ 81 (132)
T ss_pred HHHHHcCCceEEecCCc--cccCcccccccCCccceEEEEcCCCC-CccchHHHHHHHHHcCCCHHHeeeeC--HHHHhh
Confidence 34677788888877742 1111 111122333344566665533 22234489999999999999999884 445666
Q ss_pred HHHcCCeEEEEcCCCCccccCCCcEEEcCchhhh
Q 043738 292 AHDARMKCVAVASKHPVYELGAADLVVRHLDELS 325 (368)
Q Consensus 292 A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~ 325 (368)
.-.-+...+|..+...........+.-+.+++|.
T Consensus 82 L~~~~~~~~W~lg~~~~~~~~~~~L~Sp~L~eL~ 115 (132)
T PRK06100 82 LGYHSLEWVWFAGCDPLSLPAAKQLQSPLLSDID 115 (132)
T ss_pred CCcCCCCeEEECCCCccccccCcEEeCcCHHHHh
Confidence 6666777788877554333344555556666653
No 302
>TIGR03151 enACPred_II putative enoyl-(acyl-carrier-protein) reductase II. This oxidoreductase of the 2-nitropropane dioxygenase family (pfam03060) is commonly found in apparent operons with genes involved in fatty acid biosynthesis. Furthermore, this genomic context generally includes the fabG 3-oxoacyl-[ACP] reductase and lacks the fabI enoyl-[ACP] reductase.
Probab=35.04 E-value=3.6e+02 Score=25.68 Aligned_cols=86 Identities=12% Similarity=0.128 Sum_probs=52.9
Q ss_pred HHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEe-CCC-CCC--CCCCHHHHHHHHHHcCCCCCcEEEEcC
Q 043738 209 KEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVA-AED-VHR--GKPDPEMFVYAAQLLKFIPERCIVFGN 284 (368)
Q Consensus 209 ~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~-~e~-v~~--~KP~~~~~~~~le~lgi~p~~~l~IGD 284 (368)
.++++.+++.|+++....+. .... ..+...| .|.++. +-+ -+. ..+.-..+.++.+..+++ +++-|+
T Consensus 99 ~~~i~~lk~~g~~v~~~v~s-~~~a-~~a~~~G----aD~Ivv~g~eagGh~g~~~~~~ll~~v~~~~~iP---viaaGG 169 (307)
T TIGR03151 99 GKYIPRLKENGVKVIPVVAS-VALA-KRMEKAG----ADAVIAEGMESGGHIGELTTMALVPQVVDAVSIP---VIAAGG 169 (307)
T ss_pred HHHHHHHHHcCCEEEEEcCC-HHHH-HHHHHcC----CCEEEEECcccCCCCCCCcHHHHHHHHHHHhCCC---EEEECC
Confidence 35888889888776553332 2333 3333445 344432 211 111 224567777888777654 788887
Q ss_pred CH--hhHHHHHHcCCeEEEEc
Q 043738 285 SN--QTVEAAHDARMKCVAVA 303 (368)
Q Consensus 285 s~--nDl~~A~~aG~~~I~v~ 303 (368)
-. .|+..+...|...|++.
T Consensus 170 I~~~~~~~~al~~GA~gV~iG 190 (307)
T TIGR03151 170 IADGRGMAAAFALGAEAVQMG 190 (307)
T ss_pred CCCHHHHHHHHHcCCCEeecc
Confidence 44 68889989999988886
No 303
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=34.80 E-value=2e+02 Score=29.87 Aligned_cols=86 Identities=13% Similarity=0.075 Sum_probs=49.6
Q ss_pred HHHHHHHHHhCCCcEEEEcCCCh-HHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCH
Q 043738 208 SKEFVNILMHYKIPMALVSTHPR-KTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSN 286 (368)
Q Consensus 208 ~~elL~~Lk~~Gi~vaivSn~~~-~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~ 286 (368)
+...|...+..+-++++++.... ..++.+-..+++.-..-.+...++ ......-++..|+. ++|||+.
T Consensus 96 il~al~~a~~~~~~iavv~~~~~~~~~~~~~~~l~~~i~~~~~~~~~e-------~~~~v~~lk~~G~~----~vvG~~~ 164 (538)
T PRK15424 96 VMQALARARKLTSSIGVVTYQETIPALVAFQKTFNLRIEQRSYVTEED-------ARGQINELKANGIE----AVVGAGL 164 (538)
T ss_pred HHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCceEEEEecCHHH-------HHHHHHHHHHCCCC----EEEcCch
Confidence 34445555666778888877532 233444445555411112222222 22233444445654 7889977
Q ss_pred hhHHHHHHcCCeEEEEcCC
Q 043738 287 QTVEAAHDARMKCVAVASK 305 (368)
Q Consensus 287 nDl~~A~~aG~~~I~v~~~ 305 (368)
. ...|.++|+..+++...
T Consensus 165 ~-~~~A~~~g~~g~~~~s~ 182 (538)
T PRK15424 165 I-TDLAEEAGMTGIFIYSA 182 (538)
T ss_pred H-HHHHHHhCCceEEecCH
Confidence 6 68899999999988743
No 304
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=32.77 E-value=3.1e+02 Score=23.93 Aligned_cols=89 Identities=13% Similarity=0.099 Sum_probs=45.3
Q ss_pred HHHHHHHHHhC--CCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCC
Q 043738 208 SKEFVNILMHY--KIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNS 285 (368)
Q Consensus 208 ~~elL~~Lk~~--Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs 285 (368)
+..+++.|+++ ++++.+-|....... ...+.+ .+.....+.--| .+..++.+++++ .|+-+++++..
T Consensus 37 ~~~Li~~l~~~~p~~~illT~~T~tg~~-~~~~~~--~~~v~~~~~P~D------~~~~~~rfl~~~--~P~~~i~~EtE 105 (186)
T PF04413_consen 37 ARPLIKRLRKQRPDLRILLTTTTPTGRE-MARKLL--PDRVDVQYLPLD------FPWAVRRFLDHW--RPDLLIWVETE 105 (186)
T ss_dssp HHHHHHHHTT---TS-EEEEES-CCHHH-HHHGG---GGG-SEEE---S------SHHHHHHHHHHH----SEEEEES--
T ss_pred HHHHHHHHHHhCCCCeEEEEecCCchHH-HHHHhC--CCCeEEEEeCcc------CHHHHHHHHHHh--CCCEEEEEccc
Confidence 45788888876 788877766433222 222222 122334443333 267888888887 47889999988
Q ss_pred H--hhHHHHHHcCCeEEEEcCCCC
Q 043738 286 N--QTVEAAHDARMKCVAVASKHP 307 (368)
Q Consensus 286 ~--nDl~~A~~aG~~~I~v~~~~~ 307 (368)
. |=+..|++.|++++.+++--+
T Consensus 106 lWPnll~~a~~~~ip~~LvNarls 129 (186)
T PF04413_consen 106 LWPNLLREAKRRGIPVVLVNARLS 129 (186)
T ss_dssp --HHHHHH-----S-EEEEEE---
T ss_pred cCHHHHHHHhhcCCCEEEEeeeec
Confidence 7 679999999999999995433
No 305
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=32.06 E-value=49 Score=28.63 Aligned_cols=88 Identities=15% Similarity=0.150 Sum_probs=46.8
Q ss_pred ccCccHHHHHHHH---HhCCCcEEEEcCCChHH-HHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHH---cCCC
Q 043738 203 RLRTGSKEFVNIL---MHYKIPMALVSTHPRKT-LETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQL---LKFI 275 (368)
Q Consensus 203 ~~~pg~~elL~~L---k~~Gi~vaivSn~~~~~-~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~---lgi~ 275 (368)
.+.....++|+.| +..+-++++++...... ...+.+.+|+. +......+ .+-+...+++ -|++
T Consensus 58 ~I~~s~~Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~--i~~~~~~~--------~~e~~~~i~~~~~~G~~ 127 (176)
T PF06506_consen 58 EIPISGFDILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVD--IKIYPYDS--------EEEIEAAIKQAKAEGVD 127 (176)
T ss_dssp EE---HHHHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-E--EEEEEESS--------HHHHHHHHHHHHHTT--
T ss_pred EECCCHhHHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCc--eEEEEECC--------HHHHHHHHHHHHHcCCc
Confidence 3344444555544 44577888887654332 44555555653 22222211 2334444444 3543
Q ss_pred CCcEEEEcCCHhhHHHHHHcCCeEEEEcCC
Q 043738 276 PERCIVFGNSNQTVEAAHDARMKCVAVASK 305 (368)
Q Consensus 276 p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~ 305 (368)
++||++.. ...|++.|++++.+..+
T Consensus 128 ----viVGg~~~-~~~A~~~gl~~v~i~sg 152 (176)
T PF06506_consen 128 ----VIVGGGVV-CRLARKLGLPGVLIESG 152 (176)
T ss_dssp ----EEEESHHH-HHHHHHTTSEEEESS--
T ss_pred ----EEECCHHH-HHHHHHcCCcEEEEEec
Confidence 88999874 78899999999987654
No 306
>PRK07709 fructose-bisphosphate aldolase; Provisional
Probab=31.50 E-value=3.2e+02 Score=25.83 Aligned_cols=102 Identities=15% Similarity=0.133 Sum_probs=61.9
Q ss_pred cHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCC-CCC-CC---CHHHHHHHHHHcCCCCCcEEE
Q 043738 207 GSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDV-HRG-KP---DPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 207 g~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v-~~~-KP---~~~~~~~~le~lgi~p~~~l~ 281 (368)
.++++|+..++.++-+..+.-.+.+.++..++...-.. -..|+..... ... -+ -..+.+.+++...+.-.=++.
T Consensus 5 ~~~~lL~~A~~~~yAV~AfN~~n~e~~~avi~AAe~~~-sPvIiq~~~~~~~~~~~~~~~~~~~~~~a~~~~~~VPV~lH 83 (285)
T PRK07709 5 SMKEMLNKALEGKYAVGQFNMNNLEWTQAILAAAEEEK-SPVILGVSEGAARHMTGFKTVVAMVKALIEEMNITVPVAIH 83 (285)
T ss_pred cHHHHHHHHHHCCceEEEEEECCHHHHHHHHHHHHHHC-CCEEEEcCcchhhhcCCHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 36789999999999998887777788888777542111 1222222111 111 11 123455566665532223444
Q ss_pred Ec--CCHhhHHHHHHcCCeEEEEcCCCCcc
Q 043738 282 FG--NSNQTVEAAHDARMKCVAVASKHPVY 309 (368)
Q Consensus 282 IG--Ds~nDl~~A~~aG~~~I~v~~~~~~~ 309 (368)
.+ .+..++..|-++|+.+||+.+.+...
T Consensus 84 LDHg~~~e~i~~ai~~GftSVM~DgS~lp~ 113 (285)
T PRK07709 84 LDHGSSFEKCKEAIDAGFTSVMIDASHHPF 113 (285)
T ss_pred CCCCCCHHHHHHHHHcCCCEEEEeCCCCCH
Confidence 43 34467889999999999999776443
No 307
>PRK14021 bifunctional shikimate kinase/3-dehydroquinate synthase; Provisional
Probab=31.28 E-value=3.8e+02 Score=27.84 Aligned_cols=98 Identities=16% Similarity=0.225 Sum_probs=51.7
Q ss_pred ccCccHHH-HHHHHHhCCCcEEEEcCCChH----HHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHH---HHHcCC
Q 043738 203 RLRTGSKE-FVNILMHYKIPMALVSTHPRK----TLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYA---AQLLKF 274 (368)
Q Consensus 203 ~~~pg~~e-lL~~Lk~~Gi~vaivSn~~~~----~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~---le~lgi 274 (368)
..-+|+.+ +-+.+++.|.+++++++.... .+...++..|+. .|+.++...+. .|+ .+.+..+ +...+.
T Consensus 192 ~iG~g~l~~l~~~l~~~g~k~~iV~d~~v~~~~~~l~~~L~~~g~~-v~~~v~p~~E~--~ks-l~~v~~~~~~l~~~~~ 267 (542)
T PRK14021 192 RIGEGAMNHLPQVLGPKPVKVALIHTQPVQRHSDRARTLLRQGGYE-VSDIVIPDAEA--GKT-IEVANGIWQRLGNEGF 267 (542)
T ss_pred EEcCChHHHHHHHHHhcCCeEEEEECccHHHHHHHHHHHHHhCCCc-eEEEEeCCCcc--cCC-HHHHHHHHHHHHhcCC
Confidence 34456544 334455556777777765432 222334444542 33433333222 122 2333322 233454
Q ss_pred -CCCcEEEEcCCH-hhHHHHHH----cCCeEEEEcC
Q 043738 275 -IPERCIVFGNSN-QTVEAAHD----ARMKCVAVAS 304 (368)
Q Consensus 275 -~p~~~l~IGDs~-nDl~~A~~----aG~~~I~v~~ 304 (368)
..+-+++||-+. .|+..+-+ .|++.|.|+.
T Consensus 268 ~r~D~IIAIGGGsv~D~AKfvA~~y~rGi~~i~vPT 303 (542)
T PRK14021 268 TRSDAIVGLGGGAATDLAGFVAATWMRGIRYVNCPT 303 (542)
T ss_pred CCCcEEEEEcChHHHHHHHHHHHHHHcCCCEEEeCC
Confidence 345568899866 89776665 5999998874
No 308
>smart00052 EAL Putative diguanylate phosphodiesterase. Putative diguanylate phosphodiesterase, present in a variety of bacteria.
Probab=31.17 E-value=1.8e+02 Score=25.59 Aligned_cols=87 Identities=10% Similarity=0.116 Sum_probs=50.4
Q ss_pred HHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCC----CCCCCCCCHHH---HHHHHHHcCCCCCcEE
Q 043738 208 SKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAE----DVHRGKPDPEM---FVYAAQLLKFIPERCI 280 (368)
Q Consensus 208 ~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e----~v~~~KP~~~~---~~~~le~lgi~p~~~l 280 (368)
..++++.|++.|+++++---+.....-..+..+. +|.|-..- ........... +..+++.+|+ .++
T Consensus 135 ~~~~i~~l~~~G~~ialddfg~~~~~~~~l~~l~----~d~iKld~~~~~~~~~~~~~~~~l~~l~~~~~~~~~---~vi 207 (241)
T smart00052 135 AVATLQRLRELGVRIALDDFGTGYSSLSYLKRLP----VDLLKIDKSFVRDLQTDPEDEAIVQSIIELAQKLGL---QVV 207 (241)
T ss_pred HHHHHHHHHHCCCEEEEeCCCCcHHHHHHHHhCC----CCeEEECHHHHhhhccChhHHHHHHHHHHHHHHCCC---eEE
Confidence 3478999999999999865433333334555544 33322211 11111112223 3445555554 467
Q ss_pred EEc-CCHhhHHHHHHcCCeEEE
Q 043738 281 VFG-NSNQTVEAAHDARMKCVA 301 (368)
Q Consensus 281 ~IG-Ds~nDl~~A~~aG~~~I~ 301 (368)
+=| ++..+++.+.+.|+..+.
T Consensus 208 a~gVe~~~~~~~l~~~Gi~~~Q 229 (241)
T smart00052 208 AEGVETPEQLDLLRSLGCDYGQ 229 (241)
T ss_pred EecCCCHHHHHHHHHcCCCEEe
Confidence 777 788899999999987544
No 309
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=30.79 E-value=40 Score=30.22 Aligned_cols=21 Identities=10% Similarity=0.294 Sum_probs=15.3
Q ss_pred eEEEEeccCccccCcchHHHH
Q 043738 119 LGAIFEWEGVIIEDNPDLEKQ 139 (368)
Q Consensus 119 k~VIFDlDGTLid~~~~i~~~ 139 (368)
.++.||.||||......+..+
T Consensus 12 ~l~lfdvdgtLt~~r~~~~~e 32 (252)
T KOG3189|consen 12 TLCLFDVDGTLTPPRQKVTPE 32 (252)
T ss_pred eEEEEecCCccccccccCCHH
Confidence 478999999999755444433
No 310
>COG0191 Fba Fructose/tagatose bisphosphate aldolase [Carbohydrate transport and metabolism]
Probab=30.26 E-value=2.7e+02 Score=26.37 Aligned_cols=99 Identities=14% Similarity=0.129 Sum_probs=65.4
Q ss_pred HHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCC----C-CCCCHHHHHHHHHHcCCCCCcEEEE
Q 043738 208 SKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVH----R-GKPDPEMFVYAAQLLKFIPERCIVF 282 (368)
Q Consensus 208 ~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~----~-~KP~~~~~~~~le~lgi~p~~~l~I 282 (368)
++++|+..+++|+-+.-+--...+.++..++...-. --..|+...... - ..--..+...++++++++- ++.-
T Consensus 6 ~~~ll~~Ake~~yAvpAfN~~nlE~~~AileaA~e~-~sPvIiq~S~g~~~y~gg~~~~~~~v~~~a~~~~vPV--~lHl 82 (286)
T COG0191 6 MKELLDKAKENGYAVPAFNINNLETLQAILEAAEEE-KSPVIIQFSEGAAKYAGGADSLAHMVKALAEKYGVPV--ALHL 82 (286)
T ss_pred HHHHHHHHHHcCCceeeeeecCHHHHHHHHHHHHHh-CCCEEEEecccHHHHhchHHHHHHHHHHHHHHCCCCE--EEEC
Confidence 488999999999998887666678888888754211 122333322211 1 1223456777888888652 3443
Q ss_pred --cCCHhhHHHHHHcCCeEEEEcCCCCcc
Q 043738 283 --GNSNQTVEAAHDARMKCVAVASKHPVY 309 (368)
Q Consensus 283 --GDs~nDl~~A~~aG~~~I~v~~~~~~~ 309 (368)
|++..++.-|.++|+.++|+.+.+...
T Consensus 83 DHg~~~~~~~~ai~~GFsSvMiDgS~~~~ 111 (286)
T COG0191 83 DHGASFEDCKQAIRAGFSSVMIDGSHLPF 111 (286)
T ss_pred CCCCCHHHHHHHHhcCCceEEecCCcCCH
Confidence 457789999999999999999776543
No 311
>cd04732 HisA HisA. Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase catalyzes the fourth step in histidine biosynthesis, an isomerisation of the aminoaldose moiety of ProFAR to the aminoketose of PRFAR (N-(5'-phospho-D-1'-ribulosylformimino)-5-amino-1-(5''-phospho-ribosyl)-4-imidazolecarboxamide). In bacteria and archaea, ProFAR isomerase is encoded by the HisA gene.
Probab=29.79 E-value=4e+02 Score=23.69 Aligned_cols=66 Identities=17% Similarity=0.269 Sum_probs=42.4
Q ss_pred HHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcC--CHhhHHHHHHcCCeEEEEcC
Q 043738 235 TAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGN--SNQTVEAAHDARMKCVAVAS 304 (368)
Q Consensus 235 ~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGD--s~nDl~~A~~aG~~~I~v~~ 304 (368)
..+...|...+.-.-+..+....+ ++.+.+..+.+..+++ +++-|+ +..|+..+.+.|+..+++.+
T Consensus 153 ~~~~~~ga~~iii~~~~~~g~~~g-~~~~~i~~i~~~~~ip---vi~~GGi~~~~di~~~~~~Ga~gv~vg~ 220 (234)
T cd04732 153 KRFEELGVKAIIYTDISRDGTLSG-PNFELYKELAAATGIP---VIASGGVSSLDDIKALKELGVAGVIVGK 220 (234)
T ss_pred HHHHHcCCCEEEEEeecCCCccCC-CCHHHHHHHHHhcCCC---EEEecCCCCHHHHHHHHHCCCCEEEEeH
Confidence 334445544332121223333334 7788899998887654 777786 44789999999999998873
No 312
>PRK08610 fructose-bisphosphate aldolase; Reviewed
Probab=28.59 E-value=5.1e+02 Score=24.51 Aligned_cols=101 Identities=14% Similarity=0.064 Sum_probs=60.5
Q ss_pred cHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCC-CC----CCCHHHHHHHHHHcCCCCCcEEE
Q 043738 207 GSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVH-RG----KPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 207 g~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~-~~----KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
.++++|+..++.|+-+..+.-.+.+.++..++...-.. -..|+...... .. ..-..++..++++..+.-.=++.
T Consensus 5 ~~k~lL~~A~~~~yAV~AfN~~n~e~~~avi~AAee~~-sPvIl~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~vPV~lH 83 (286)
T PRK08610 5 SMKEMLIDAKENGYAVGQYNLNNLEFTQAILEASQEEN-APVILGVSEGAARYMSGFYTVVKMVEGLMHDLNITIPVAIH 83 (286)
T ss_pred cHHHHHHHHHHCCceEEEEEECCHHHHHHHHHHHHHHC-CCEEEEcCccHHhhcCcHHHHHHHHHHHHHHcCCCCCEEEE
Confidence 36789999999999998887777788887777542111 12233221111 11 11233455566666532122344
Q ss_pred Ec--CCHhhHHHHHHcCCeEEEEcCCCCc
Q 043738 282 FG--NSNQTVEAAHDARMKCVAVASKHPV 308 (368)
Q Consensus 282 IG--Ds~nDl~~A~~aG~~~I~v~~~~~~ 308 (368)
.+ .+..++..|.++|+.+||+.+.+..
T Consensus 84 LDHg~~~e~i~~ai~~GftSVM~DgS~l~ 112 (286)
T PRK08610 84 LDHGSSFEKCKEAIDAGFTSVMIDASHSP 112 (286)
T ss_pred CCCCCCHHHHHHHHHcCCCEEEEeCCCCC
Confidence 33 3456788888999999999977643
No 313
>cd01766 Ufm1 Urm1-like ubiquitin domain. Ufm1 (ubiquitin-fold modifier 1) is a post-translational UBL (ubiquitin-like) modifier with a tertiary structure similar to that of ubiquitin. Ufm1 is initially expressed as a precursor which undergoes C-terminal cleavage to expose a conserved glycine residue that is required for the conjugation reactions involving Ufm1.
Probab=28.42 E-value=84 Score=23.28 Aligned_cols=42 Identities=17% Similarity=0.221 Sum_probs=34.5
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCC
Q 043738 256 HRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARM 297 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~ 297 (368)
....|-...++++++.+++++..+..|-+.--+|..++.+|-
T Consensus 23 pE~aPftAvlkfaAEeFkv~~~TsAiiTndGvGINP~qtAGn 64 (82)
T cd01766 23 PESTPFTAVLKFAAEEFKVPAATSAIITNDGIGINPAQTAGN 64 (82)
T ss_pred cccCchHHHHHHHHHhcCCCccceeEEecCccccChhhcccc
Confidence 345577899999999999999999888766667888888883
No 314
>TIGR02495 NrdG2 anaerobic ribonucleoside-triphosphate reductase activating protein. This enzyme is a member of the radical-SAM family (pfam04055). It is often gene clustered with the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, TIGR02487) and presumably fulfills the identical function as NrdG which utilizes S-adenosyl methionine, an iron-sulfur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centered radical in NrdD.
Probab=28.15 E-value=1.2e+02 Score=26.27 Aligned_cols=30 Identities=13% Similarity=0.216 Sum_probs=25.2
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChH
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRK 231 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~ 231 (368)
..+.+.+.++++.+++.|+.+.+.||+...
T Consensus 73 Pll~~~l~~li~~~~~~g~~v~i~TNg~~~ 102 (191)
T TIGR02495 73 PTLQAGLPDFLRKVRELGFEVKLDTNGSNP 102 (191)
T ss_pred ccCcHhHHHHHHHHHHCCCeEEEEeCCCCH
Confidence 455677889999999999999999999643
No 315
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=27.30 E-value=5.1e+02 Score=24.04 Aligned_cols=104 Identities=11% Similarity=0.008 Sum_probs=58.3
Q ss_pred HHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCH-
Q 043738 208 SKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSN- 286 (368)
Q Consensus 208 ~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~- 286 (368)
+..+-+.|++.|..+.++++.........+++.|+. .+...+... ...+..-+...++..+ | + +.|=|++
T Consensus 20 cl~LA~~l~~~g~~v~f~~~~~~~~~~~~i~~~g~~----v~~~~~~~~-~~~d~~~~~~~l~~~~--~-d-~vV~D~y~ 90 (279)
T TIGR03590 20 CLTLARALHAQGAEVAFACKPLPGDLIDLLLSAGFP----VYELPDESS-RYDDALELINLLEEEK--F-D-ILIVDHYG 90 (279)
T ss_pred HHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHcCCe----EEEecCCCc-hhhhHHHHHHHHHhcC--C-C-EEEEcCCC
Confidence 445777787888999999888766666677666643 222222111 1112333445555442 2 2 4455554
Q ss_pred ---hhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCch
Q 043738 287 ---QTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLD 322 (368)
Q Consensus 287 ---nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~ 322 (368)
......+..|.+.+.+.+...... .+|+++....
T Consensus 91 ~~~~~~~~~k~~~~~l~~iDD~~~~~~--~~D~vin~~~ 127 (279)
T TIGR03590 91 LDADWEKLIKEFGRKILVIDDLADRPH--DCDLLLDQNL 127 (279)
T ss_pred CCHHHHHHHHHhCCeEEEEecCCCCCc--CCCEEEeCCC
Confidence 235666667878777775433222 4788876644
No 316
>PRK12737 gatY tagatose-bisphosphate aldolase; Reviewed
Probab=26.89 E-value=4.5e+02 Score=24.86 Aligned_cols=100 Identities=11% Similarity=0.099 Sum_probs=61.8
Q ss_pred cHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCC-CCCC---CHHHHHHHHHHcCCCCCcEEEE
Q 043738 207 GSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVH-RGKP---DPEMFVYAAQLLKFIPERCIVF 282 (368)
Q Consensus 207 g~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~-~~KP---~~~~~~~~le~lgi~p~~~l~I 282 (368)
.++++|+..++.|+-+..+.-.+.+.++..++...-.. -..|+...... ..-+ -..+...+++...++ =++..
T Consensus 5 ~~~~~l~~A~~~~yaV~AfN~~n~e~~~avi~AAee~~-sPvIiq~~~~~~~~~g~~~~~~~~~~~a~~~~VP--ValHL 81 (284)
T PRK12737 5 STKNMLKKAQAEGYAVPAFNIHNLETLQVVVETAAELR-SPVILAGTPGTFSYAGTDYIVAIAEVAARKYNIP--LALHL 81 (284)
T ss_pred cHHHHHHHHHHcCceEEEEEeCCHHHHHHHHHHHHHhC-CCEEEEcCccHHhhCCHHHHHHHHHHHHHHCCCC--EEEEC
Confidence 46789999999999998888877888888887542111 12333222111 1111 123455666666664 23333
Q ss_pred c--CCHhhHHHHHHcCCeEEEEcCCCCcc
Q 043738 283 G--NSNQTVEAAHDARMKCVAVASKHPVY 309 (368)
Q Consensus 283 G--Ds~nDl~~A~~aG~~~I~v~~~~~~~ 309 (368)
+ .+...+..|.++|+.+||+.+.+...
T Consensus 82 DH~~~~e~i~~ai~~GftSVMiDgS~lp~ 110 (284)
T PRK12737 82 DHHEDLDDIKKKVRAGIRSVMIDGSHLSF 110 (284)
T ss_pred CCCCCHHHHHHHHHcCCCeEEecCCCCCH
Confidence 2 23456888889999999999776433
No 317
>PRK11070 ssDNA exonuclease RecJ; Provisional
Probab=26.50 E-value=7.7e+02 Score=25.88 Aligned_cols=110 Identities=18% Similarity=0.197 Sum_probs=61.9
Q ss_pred cCccHHHHHHHH---HhCCCcEEEEcCCChH------HHHHHHHHcCccccccEEEeCC-CCCCCCCCHHHHHHHHHHcC
Q 043738 204 LRTGSKEFVNIL---MHYKIPMALVSTHPRK------TLETAIDSIGIEEYFTAIVAAE-DVHRGKPDPEMFVYAAQLLK 273 (368)
Q Consensus 204 ~~pg~~elL~~L---k~~Gi~vaivSn~~~~------~~~~~l~~~gl~~~Fd~iv~~e-~v~~~KP~~~~~~~~le~lg 273 (368)
..+++.+.++.+ ..++-++.|++..+.. .+...++++|... ....+..- .-+ .-.+...++.+.+. |
T Consensus 51 ~l~~m~~a~~ri~~ai~~~e~I~I~gDyD~DGitstail~~~L~~~g~~~-~~~~IP~R~~eG-YGl~~~~i~~~~~~-~ 127 (575)
T PRK11070 51 QLSGIEKAVELLYNALREGTRIIVVGDFDADGATSTALSVLALRSLGCSN-VDYLVPNRFEDG-YGLSPEVVDQAHAR-G 127 (575)
T ss_pred HhhCHHHHHHHHHHHHHCCCEEEEEEecCccHHHHHHHHHHHHHHcCCCc-eEEEeCCCCcCC-CCCCHHHHHHHHhc-C
Confidence 345565555554 4457899999886543 3345566666521 12222210 111 23356777776653 3
Q ss_pred CCCCcEEEEcCCHhh---HHHHHHcCCeEEEEcCCCCccccCCCcEEE
Q 043738 274 FIPERCIVFGNSNQT---VEAAHDARMKCVAVASKHPVYELGAADLVV 318 (368)
Q Consensus 274 i~p~~~l~IGDs~nD---l~~A~~aG~~~I~v~~~~~~~~~~~ad~vv 318 (368)
.+=+|.++-+.++ ++.|++.|+.+|..........+..|+.+|
T Consensus 128 --~~LiItvD~Gi~~~e~i~~a~~~gidvIVtDHH~~~~~~P~a~a~i 173 (575)
T PRK11070 128 --AQLIVTVDNGISSHAGVAHAHALGIPVLVTDHHLPGETLPAADAII 173 (575)
T ss_pred --CCEEEEEcCCcCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCeEEE
Confidence 3457778777765 555599999988766443333343455555
No 318
>PHA01735 hypothetical protein
Probab=25.75 E-value=2.2e+02 Score=20.86 Aligned_cols=52 Identities=8% Similarity=-0.013 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChH
Q 043738 180 PAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRK 231 (368)
Q Consensus 180 ~~~~~~l~~~~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~ 231 (368)
.+.+..+.......+...+...-....+.+..+++|+++++.-+.+.|++-.
T Consensus 7 ee~fs~LH~~lt~El~~RiksgeATtaDL~AA~d~Lk~NdItgv~~~gspl~ 58 (76)
T PHA01735 7 EEQFDELHQLLTNELLSRIKSGEATTADLRAACDWLKSNDITGVAVDGSPLA 58 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHCCCceeeCCCCHHH
Confidence 3444555555554444444333355567888999999999988888887543
No 319
>PRK06856 DNA polymerase III subunit psi; Validated
Probab=25.68 E-value=3e+02 Score=22.66 Aligned_cols=105 Identities=15% Similarity=0.171 Sum_probs=61.3
Q ss_pred HHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHH
Q 043738 214 ILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAH 293 (368)
Q Consensus 214 ~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~ 293 (368)
.|.+.|+..+.+..-... .- .....+.....-++.+++.... -++ +|..++..+++++++|.++- ..-+.+..
T Consensus 7 ~LqemGItqW~Lr~P~~L--~g-~~~i~lp~~~rLliV~~~~~~~-~~~-L~~dVLrsl~L~~~q~~~lt--~eq~~~L~ 79 (128)
T PRK06856 7 LLQQLGITQWVLRRPGVL--QG-EIAISLPEHIRLVIVAEELPAL-TDP-LLQDVLRSLTLSPDQVLCLT--PEQVAMLP 79 (128)
T ss_pred HHHHcCCceEEecCcccc--CC-CccccCCccceEEEEeCCCCcc-cCh-HHHHHHHHcCCCHHHeeeeC--HHHHhhCC
Confidence 456778888888774211 11 0122334444556666654422 234 89999999999999999874 33454543
Q ss_pred HcCCeEEEEcCCCCccccCCCcEEEcCchhhh
Q 043738 294 DARMKCVAVASKHPVYELGAADLVVRHLDELS 325 (368)
Q Consensus 294 ~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~ 325 (368)
.-.-.-+|..+.........+-+.-+.++||.
T Consensus 80 ~~~~~~~W~lg~~~~~~~~~~~l~Sp~L~eL~ 111 (128)
T PRK06856 80 QGHRCNSWLLGTDEPLSLAGAQWQSPALTELK 111 (128)
T ss_pred CCCCceEEECCCcccccccCCeEeCcCHHHHh
Confidence 33222347666654444444666667777663
No 320
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=25.35 E-value=3.5e+02 Score=23.18 Aligned_cols=74 Identities=14% Similarity=0.044 Sum_probs=40.5
Q ss_pred HHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcccccc-EEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCH
Q 043738 208 SKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFT-AIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSN 286 (368)
Q Consensus 208 ~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd-~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~ 286 (368)
+.++++.+...|.+++++.+.+ .......+++. ..|-. .+++...... +..-...+++.++-...++|+||=+.
T Consensus 37 ~~~l~~~~~~~~~~ifllG~~~-~~~~~~~~~l~-~~yP~l~ivg~~~g~f---~~~~~~~i~~~I~~~~pdiv~vglG~ 111 (172)
T PF03808_consen 37 FPDLLRRAEQRGKRIFLLGGSE-EVLEKAAANLR-RRYPGLRIVGYHHGYF---DEEEEEAIINRINASGPDIVFVGLGA 111 (172)
T ss_pred HHHHHHHHHHcCCeEEEEeCCH-HHHHHHHHHHH-HHCCCeEEEEecCCCC---ChhhHHHHHHHHHHcCCCEEEEECCC
Confidence 4567777778889999998874 33333333321 11112 1222222112 34455556666555556788888655
No 321
>COG0019 LysA Diaminopimelate decarboxylase [Amino acid transport and metabolism]
Probab=25.26 E-value=2.5e+02 Score=27.92 Aligned_cols=34 Identities=26% Similarity=0.427 Sum_probs=25.2
Q ss_pred CCCCCcEEEEcCCH--hhHHHHHHcCCeEEEEcCCC
Q 043738 273 KFIPERCIVFGNSN--QTVEAAHDARMKCVAVASKH 306 (368)
Q Consensus 273 gi~p~~~l~IGDs~--nDl~~A~~aG~~~I~v~~~~ 306 (368)
|++|++++|-|... .++..|.+.|+.+|-+++-.
T Consensus 93 G~~~~~I~f~g~~ks~~ei~~a~e~gi~~i~vdS~~ 128 (394)
T COG0019 93 GFPPERIVFSGPAKSEEEIAFALELGIKLINVDSEE 128 (394)
T ss_pred CCChhhEEECCCCCCHHHHHHHHHcCCcEEEeCCHH
Confidence 88888888888766 46888888888766666443
No 322
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=25.17 E-value=81 Score=31.93 Aligned_cols=38 Identities=18% Similarity=0.085 Sum_probs=19.5
Q ss_pred CCCceEEEEeccCccccCcc-hHH----HHHHHHHHHHhCCCC
Q 043738 115 GCGWLGAIFEWEGVIIEDNP-DLE----KQAWLTLAQEEGKSP 152 (368)
Q Consensus 115 ~~~ik~VIFDlDGTLid~~~-~i~----~~a~~~~~~~~g~~~ 152 (368)
...|+++-||||-||+.... .+. ..+.+.+.++.|.+.
T Consensus 9 l~~i~~iGFDmDyTLa~Y~~~~~~~L~y~~~~~~LV~~~gYP~ 51 (448)
T PF05761_consen 9 LKDIDVIGFDMDYTLARYKSPELEELIYELARERLVEEKGYPE 51 (448)
T ss_dssp CCC--EEEE-TBTTTBEE-CCHHHHHHHHHHHHHHHHHTT--G
T ss_pred cccCCEEEECcccchhhcCHHHHHHHHHHHHHHHHHhccCCCH
Confidence 35689999999999997554 222 223334444456543
No 323
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=24.40 E-value=2.2e+02 Score=30.45 Aligned_cols=97 Identities=12% Similarity=0.101 Sum_probs=63.6
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccc--ccc-EEEeCC--CC--------------CCCCCCHH
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEE--YFT-AIVAAE--DV--------------HRGKPDPE 263 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~--~Fd-~iv~~e--~v--------------~~~KP~~~ 263 (368)
++..+..+.++.....|+.+-++|+......+..-.++|..- |-. ...+.+ +. +..--.|+
T Consensus 492 pprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAgVfpe 571 (942)
T KOG0205|consen 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAGVFPE 571 (942)
T ss_pred CCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccccCHH
Confidence 445667778888888999999999976666566656665432 111 111110 00 11122244
Q ss_pred HHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeE
Q 043738 264 MFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKC 299 (368)
Q Consensus 264 ~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~ 299 (368)
.-..+.+.++-....|-+.||+.||..+.++|.+..
T Consensus 572 hKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigi 607 (942)
T KOG0205|consen 572 HKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGI 607 (942)
T ss_pred HHHHHHHHHhhcCceecccCCCcccchhhcccccce
Confidence 445667777777788999999999999999998653
No 324
>TIGR02826 RNR_activ_nrdG3 anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of proteins related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes.
Probab=24.34 E-value=1.4e+02 Score=25.13 Aligned_cols=25 Identities=8% Similarity=0.068 Sum_probs=21.4
Q ss_pred ccHHHHHHHHHhCCCcEEEEcCCCh
Q 043738 206 TGSKEFVNILMHYKIPMALVSTHPR 230 (368)
Q Consensus 206 pg~~elL~~Lk~~Gi~vaivSn~~~ 230 (368)
+.+.++++.+++.|+++++.||+..
T Consensus 75 ~~l~~ll~~lk~~Gl~i~l~Tg~~~ 99 (147)
T TIGR02826 75 EALLSLLKIFKEKGLKTCLYTGLEP 99 (147)
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCC
Confidence 4577899999999999999999744
No 325
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=24.14 E-value=3.2e+02 Score=23.42 Aligned_cols=74 Identities=16% Similarity=0.186 Sum_probs=36.5
Q ss_pred HHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcccccc-EEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCH
Q 043738 208 SKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFT-AIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSN 286 (368)
Q Consensus 208 ~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd-~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~ 286 (368)
+.++++.+..++.+++++.+.+ ..+....+++.- .|.. .+++..+.... .+.-..+++.++-...++|+||=+.
T Consensus 35 ~~~ll~~~~~~~~~v~llG~~~-~~~~~~~~~l~~-~yp~l~i~g~~~g~~~---~~~~~~i~~~I~~~~pdiv~vglG~ 109 (171)
T cd06533 35 MPALLELAAQKGLRVFLLGAKP-EVLEKAAERLRA-RYPGLKIVGYHHGYFG---PEEEEEIIERINASGADILFVGLGA 109 (171)
T ss_pred HHHHHHHHHHcCCeEEEECCCH-HHHHHHHHHHHH-HCCCcEEEEecCCCCC---hhhHHHHHHHHHHcCCCEEEEECCC
Confidence 4567888888889999996653 444443333211 1111 12222221111 1112225555555556777777443
No 326
>smart00540 LEM in nuclear membrane-associated proteins. LEM, domain in nuclear membrane-associated proteins, including lamino-associated polypeptide 2 and emerin.
Probab=24.12 E-value=82 Score=20.90 Aligned_cols=31 Identities=23% Similarity=0.365 Sum_probs=25.6
Q ss_pred HHHHHHHHhCCCcEEEEcCCChHHHHHHHHH
Q 043738 209 KEFVNILMHYKIPMALVSTHPRKTLETAIDS 239 (368)
Q Consensus 209 ~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~ 239 (368)
.++.+.|++.|++.+-||...+......+..
T Consensus 9 ~eL~~~L~~~G~~~gPIt~sTR~vy~kkL~~ 39 (44)
T smart00540 9 AELRAELKQYGLPPGPITDTTRKLYEKKLRK 39 (44)
T ss_pred HHHHHHHHHcCCCCCCcCcchHHHHHHHHHH
Confidence 4788899999999999999888777766654
No 327
>PRK03692 putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Provisional
Probab=24.11 E-value=2.9e+02 Score=25.43 Aligned_cols=73 Identities=12% Similarity=0.105 Sum_probs=41.3
Q ss_pred HHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccE-EEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCH
Q 043738 208 SKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTA-IVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSN 286 (368)
Q Consensus 208 ~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~-iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~ 286 (368)
+.++++....+|++++++.+. ...++...+++.-. | .. +++..+ +.-. ++-...+++..+-...++++||=+.
T Consensus 94 ~~~ll~~~~~~~~~v~llG~~-~~v~~~a~~~l~~~-y-~l~i~g~~~-Gyf~--~~e~~~i~~~I~~s~~dil~VglG~ 167 (243)
T PRK03692 94 WEALMARAGKEGTPVFLVGGK-PEVLAQTEAKLRTQ-W-NVNIVGSQD-GYFT--PEQRQALFERIHASGAKIVTVAMGS 167 (243)
T ss_pred HHHHHHHHHhcCCeEEEECCC-HHHHHHHHHHHHHH-h-CCEEEEEeC-CCCC--HHHHHHHHHHHHhcCCCEEEEECCC
Confidence 355677777788999999665 44444444443221 2 21 222222 2222 3344567777777778888888553
No 328
>COG4483 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.89 E-value=97 Score=22.37 Aligned_cols=26 Identities=12% Similarity=0.116 Sum_probs=21.2
Q ss_pred HHHHHHHcCCCCCcEEEEcCCHhhHHHHHH
Q 043738 265 FVYAAQLLKFIPERCIVFGNSNQTVEAAHD 294 (368)
Q Consensus 265 ~~~~le~lgi~p~~~l~IGDs~nDl~~A~~ 294 (368)
.+++++++|+ ++++||...|++|.+.
T Consensus 7 VqQlLK~~G~----ivyfg~r~~~iemm~~ 32 (68)
T COG4483 7 VQQLLKKFGI----IVYFGKRLYDIEMMQI 32 (68)
T ss_pred HHHHHHHCCe----eeecCCHHHHHHHHHH
Confidence 4677888886 6999999999998763
No 329
>PRK11303 DNA-binding transcriptional regulator FruR; Provisional
Probab=23.83 E-value=5.7e+02 Score=23.68 Aligned_cols=21 Identities=10% Similarity=0.324 Sum_probs=11.9
Q ss_pred cHHHHHHHHHhCCCc-EEEEcC
Q 043738 207 GSKEFVNILMHYKIP-MALVST 227 (368)
Q Consensus 207 g~~elL~~Lk~~Gi~-vaivSn 227 (368)
+.....+.|.+.|.+ ++++++
T Consensus 166 ~~~~a~~~L~~~G~r~I~~i~~ 187 (328)
T PRK11303 166 DAEMLAESLLKFPAESILLLGA 187 (328)
T ss_pred HHHHHHHHHHHCCCCeEEEEeC
Confidence 345566666666654 555544
No 330
>TIGR03365 Bsubt_queE 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. This uncharacterized enzyme, designated QueE, participates in the biosynthesis, from GTP, of 7-cyano-7-deazaguanosine, also called preQ0 because in many species it is a precursor of queuosine. In most Archaea, it is instead the precursor of a different tRNA modified base, archaeosine.
Probab=23.53 E-value=84 Score=28.73 Aligned_cols=29 Identities=14% Similarity=0.048 Sum_probs=25.1
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCCh
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPR 230 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~ 230 (368)
..+.+++.++++.+++.|+++.+.||+..
T Consensus 83 Pll~~~l~~li~~l~~~g~~v~leTNGtl 111 (238)
T TIGR03365 83 PALQKPLGELIDLGKAKGYRFALETQGSV 111 (238)
T ss_pred hhhhHhHHHHHHHHHHCCCCEEEECCCCC
Confidence 44567889999999999999999999964
No 331
>CHL00162 thiG thiamin biosynthesis protein G; Validated
Probab=23.22 E-value=6.2e+02 Score=23.67 Aligned_cols=97 Identities=8% Similarity=0.044 Sum_probs=66.9
Q ss_pred cccCccHHHHHHH---HHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeC-CCCCCCCCCHHHHHHHHHHcCCCCC
Q 043738 202 YRLRTGSKEFVNI---LMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAA-EDVHRGKPDPEMFVYAAQLLKFIPE 277 (368)
Q Consensus 202 ~~~~pg~~elL~~---Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~-e~v~~~KP~~~~~~~~le~lgi~p~ 277 (368)
..+.|+..++++. |-+.|+.|..+++.+....+ .++..|.....- .++ -..+.+-.++..++.+.+...++
T Consensus 117 ~~LlPD~~etl~Aae~Lv~eGF~VlPY~~~D~v~a~-rLed~Gc~aVMP--lgsPIGSg~Gl~n~~~l~~i~e~~~vp-- 191 (267)
T CHL00162 117 KYLLPDPIGTLKAAEFLVKKGFTVLPYINADPMLAK-HLEDIGCATVMP--LGSPIGSGQGLQNLLNLQIIIENAKIP-- 191 (267)
T ss_pred cccCCChHHHHHHHHHHHHCCCEEeecCCCCHHHHH-HHHHcCCeEEee--ccCcccCCCCCCCHHHHHHHHHcCCCc--
Confidence 4677887777664 56789999999998765554 445555331110 011 12356777899999999987654
Q ss_pred cEEEEcCC---HhhHHHHHHcCCeEEEEcCC
Q 043738 278 RCIVFGNS---NQTVEAAHDARMKCVAVASK 305 (368)
Q Consensus 278 ~~l~IGDs---~nDl~~A~~aG~~~I~v~~~ 305 (368)
+.+|-+ .+|+..|-+.|...|.++.+
T Consensus 192 --VivdAGIgt~sDa~~AmElGaDgVL~nSa 220 (267)
T CHL00162 192 --VIIDAGIGTPSEASQAMELGASGVLLNTA 220 (267)
T ss_pred --EEEeCCcCCHHHHHHHHHcCCCEEeecce
Confidence 666654 48999999999999998855
No 332
>PRK00748 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Validated
Probab=23.20 E-value=5.3e+02 Score=22.89 Aligned_cols=68 Identities=18% Similarity=0.240 Sum_probs=43.6
Q ss_pred HHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcC--CHhhHHHHHHcC-CeEEEEcC
Q 043738 233 LETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGN--SNQTVEAAHDAR-MKCVAVAS 304 (368)
Q Consensus 233 ~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGD--s~nDl~~A~~aG-~~~I~v~~ 304 (368)
....+...|....+-.-+..+....+ ++-+.+..+.+..++ .+++-|+ +..|+..+.+.| +..|++..
T Consensus 151 ~~~~~~~~g~~~ii~~~~~~~g~~~G-~d~~~i~~l~~~~~i---pvia~GGi~~~~di~~~~~~g~~~gv~vg~ 221 (233)
T PRK00748 151 LAKRFEDAGVKAIIYTDISRDGTLSG-PNVEATRELAAAVPI---PVIASGGVSSLDDIKALKGLGAVEGVIVGR 221 (233)
T ss_pred HHHHHHhcCCCEEEEeeecCcCCcCC-CCHHHHHHHHHhCCC---CEEEeCCCCCHHHHHHHHHcCCccEEEEEH
Confidence 33444555554322221223333344 788999999988764 3788885 557999999988 99888874
No 333
>PF04358 DsrC: DsrC like protein; InterPro: IPR007453 DsrC (P45573 from SWISSPROT) has been observed to co-purify with Desulphovibrio vulgaris dissimilatory sulphite reductase []. However, DsrC appears to be only loosely associated to the sulphite reductase, which suggests that it may not be an integral part of the dissimilatory sulphite reductase. Many proteins in this entry are found in organisms such as Escherichia coli and Haemophilus influenzae which do not contain dissimilatory sulphite reductases but can synthesise assimilatory sirohaem sulphite and nitrite reductases. It is speculated that DsrC may be involved in the assembly, folding or stabilisation of sirohaem proteins []. The strictly conserved cysteine in the C terminus suggests that DsrC may have a catalytic function in the metabolism of sulphur compounds []. Also included in this entry is TusE, a partner to TusBCD in a sulphur relay system for 2-thiouridine biosynthesis, a tRNA base modification process. Many proteins in this entry are annotated as the third (gamma) subunit of dissimilatory sulphite reductase ; PDB: 2V4J_F 2A5W_C 1SAU_A 1JI8_A 1YX3_A.
Probab=22.67 E-value=4e+02 Score=21.28 Aligned_cols=37 Identities=22% Similarity=0.237 Sum_probs=23.5
Q ss_pred eEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHH
Q 043738 119 LGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAF 156 (368)
Q Consensus 119 k~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~ 156 (368)
+.|-+|=||=|+|. .+........++++.|+.++...
T Consensus 7 ~~i~~D~eGfL~~~-~dW~eevA~~lA~~egI~Ltd~H 43 (109)
T PF04358_consen 7 KTIETDEEGFLVDP-EDWNEEVAEALAKEEGIELTDEH 43 (109)
T ss_dssp EEEEEETTSEESSG-GG--HHHHHHHHHCTT-S--HHH
T ss_pred EEeeeCCCcCcCCh-HhCCHHHHHHHHHHcCCCCCHHH
Confidence 56889999999973 35566666677777787755544
No 334
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional
Probab=22.61 E-value=3.4e+02 Score=27.73 Aligned_cols=98 Identities=15% Similarity=0.156 Sum_probs=53.1
Q ss_pred ccCccHHHHHHHHHhC--CCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHH-cC------
Q 043738 203 RLRTGSKEFVNILMHY--KIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQL-LK------ 273 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~--Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~-lg------ 273 (368)
+.-|.+...++.+... .+..-++ .......+.+++++...-..++..+....+++..+-+...+.. .+
T Consensus 129 p~Cp~~v~~~~~~a~~~~~i~~~~i---d~~~~~~~~~~~~v~~VP~~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 205 (517)
T PRK15317 129 HNCPDVVQALNLMAVLNPNITHTMI---DGALFQDEVEARNIMAVPTVFLNGEEFGQGRMTLEEILAKLDTGAAARAAEE 205 (517)
T ss_pred CCcHHHHHHHHHHHHhCCCceEEEE---EchhCHhHHHhcCCcccCEEEECCcEEEecCCCHHHHHHHHhccccccchhh
Confidence 4445666666666553 2222223 2233344455566553333333333344455544444433332 12
Q ss_pred ---CCCCcEEEEcCCHhhHHHHHHc---CCeEEEEc
Q 043738 274 ---FIPERCIVFGNSNQTVEAAHDA---RMKCVAVA 303 (368)
Q Consensus 274 ---i~p~~~l~IGDs~nDl~~A~~a---G~~~I~v~ 303 (368)
...-+++.||-++..+.+|..+ |++++.+.
T Consensus 206 ~~~~~~~dvvIIGgGpaGl~aA~~la~~G~~v~li~ 241 (517)
T PRK15317 206 LNAKDPYDVLVVGGGPAGAAAAIYAARKGIRTGIVA 241 (517)
T ss_pred cccCCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEe
Confidence 3345899999999998888764 88887774
No 335
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=22.22 E-value=4.9e+02 Score=26.12 Aligned_cols=57 Identities=19% Similarity=0.300 Sum_probs=39.8
Q ss_pred ccEEEeCCCCCCCCCCHHHHHHHHHHcC-CCCCcEEEEcCCHhhHHHHHH-------cCCeEEEEc
Q 043738 246 FTAIVAAEDVHRGKPDPEMFVYAAQLLK-FIPERCIVFGNSNQTVEAAHD-------ARMKCVAVA 303 (368)
Q Consensus 246 Fd~iv~~e~v~~~KP~~~~~~~~le~lg-i~p~~~l~IGDs~nDl~~A~~-------aG~~~I~v~ 303 (368)
||.|+. +..++-|-...+|.+..+--+ +.|+++++|=|+.-+-.+... +++..|-++
T Consensus 184 fdvIIv-DTSGRh~qe~sLfeEM~~v~~ai~Pd~vi~VmDasiGQaae~Qa~aFk~~vdvg~vIlT 248 (483)
T KOG0780|consen 184 FDVIIV-DTSGRHKQEASLFEEMKQVSKAIKPDEIIFVMDASIGQAAEAQARAFKETVDVGAVILT 248 (483)
T ss_pred CcEEEE-eCCCchhhhHHHHHHHHHHHhhcCCCeEEEEEeccccHhHHHHHHHHHHhhccceEEEE
Confidence 555443 445777888999998888654 689999999998765444332 466666665
No 336
>PRK12738 kbaY tagatose-bisphosphate aldolase; Reviewed
Probab=22.14 E-value=6.8e+02 Score=23.69 Aligned_cols=98 Identities=8% Similarity=0.043 Sum_probs=60.3
Q ss_pred HHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCC-C---CCCCHHHHHHHHHHcCCCCCcEEEEc
Q 043738 208 SKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVH-R---GKPDPEMFVYAAQLLKFIPERCIVFG 283 (368)
Q Consensus 208 ~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~-~---~KP~~~~~~~~le~lgi~p~~~l~IG 283 (368)
++++|+..++.|+-+..+.-.+.+.++..++...-.. -..|+...... . .+.-..+...++++.+++ =++..+
T Consensus 6 ~k~iL~~A~~~~yAV~AfN~~n~e~~~avi~AAee~~-sPvIlq~s~~~~~~~~~~~~~~~~~~~a~~~~VP--ValHLD 82 (286)
T PRK12738 6 TKYLLQDAQANGYAVPAFNIHNAETIQAILEVCSEMR-SPVILAGTPGTFKHIALEEIYALCSAYSTTYNMP--LALHLD 82 (286)
T ss_pred HHHHHHHHHHCCceEEEEEeCCHHHHHHHHHHHHHHC-CCEEEEcCcchhhhCCHHHHHHHHHHHHHHCCCC--EEEECC
Confidence 6789999999999998887777888888887542111 12333221111 1 111133455666676664 123332
Q ss_pred --CCHhhHHHHHHcCCeEEEEcCCCCc
Q 043738 284 --NSNQTVEAAHDARMKCVAVASKHPV 308 (368)
Q Consensus 284 --Ds~nDl~~A~~aG~~~I~v~~~~~~ 308 (368)
.+...+.-|-++|+.+||+.+.+-.
T Consensus 83 Hg~~~e~i~~ai~~GFtSVM~DgS~lp 109 (286)
T PRK12738 83 HHESLDDIRRKVHAGVRSAMIDGSHFP 109 (286)
T ss_pred CCCCHHHHHHHHHcCCCeEeecCCCCC
Confidence 3446688888899999999977643
No 337
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=22.06 E-value=4.4e+02 Score=25.56 Aligned_cols=32 Identities=16% Similarity=0.224 Sum_probs=24.5
Q ss_pred CCCCcEEEEcCCHhh---HHHHHHcCCeEEEEcCC
Q 043738 274 FIPERCIVFGNSNQT---VEAAHDARMKCVAVASK 305 (368)
Q Consensus 274 i~p~~~l~IGDs~nD---l~~A~~aG~~~I~v~~~ 305 (368)
..|+-+++.||+..- .-+|...|++++.+.++
T Consensus 92 ~~Pd~vlv~GD~~~~la~alaA~~~~IPv~HveaG 126 (365)
T TIGR03568 92 LKPDLVVVLGDRFEMLAAAIAAALLNIPIAHIHGG 126 (365)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHhCCcEEEEECC
Confidence 358889999999854 55666679999977755
No 338
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=22.01 E-value=1.3e+02 Score=27.45 Aligned_cols=35 Identities=20% Similarity=0.297 Sum_probs=30.7
Q ss_pred HHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcc
Q 043738 209 KEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIE 243 (368)
Q Consensus 209 ~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~ 243 (368)
.+.+.+|++.|++|+++|+.....+..+.+.+|+.
T Consensus 29 ~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 29 APVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred chHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 36788899999999999999888888888888876
No 339
>TIGR00167 cbbA ketose-bisphosphate aldolases. fructose-bisphosphate and tagatose-bisphosphate aldolase.
Probab=21.97 E-value=6.8e+02 Score=23.67 Aligned_cols=100 Identities=10% Similarity=0.072 Sum_probs=59.8
Q ss_pred cHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCC-C-CC---CHHHHHHHHHHcCCCCCcEEE
Q 043738 207 GSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHR-G-KP---DPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 207 g~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~-~-KP---~~~~~~~~le~lgi~p~~~l~ 281 (368)
.++++|+..++.|+-+..+.-.+.+.++..++...-.. -..|+....... . .+ -..+...++++.+..-. +..
T Consensus 5 ~~k~iL~~A~~~~yAV~AfN~~n~e~~~avi~AAee~~-sPvIlq~~~~~~~~~~g~~~~~~~~~~~a~~~~~~VP-V~l 82 (288)
T TIGR00167 5 DVKELLQDAKEEGYAIPAFNINNLETINAVLEAAAEEK-SPVIIQFSNGAAKYIAGLGAISAMVKAMSEAYPYGVP-VAL 82 (288)
T ss_pred cHHHHHHHHHHCCceEEEEEECCHHHHHHHHHHHHHHC-CCEEEECCcchhhccCCHHHHHHHHHHHHHhccCCCc-EEE
Confidence 46789999999999998887777888888887542211 123333222111 1 11 12234445555522212 333
Q ss_pred EcCC---HhhHHHHHHcCCeEEEEcCCCCc
Q 043738 282 FGNS---NQTVEAAHDARMKCVAVASKHPV 308 (368)
Q Consensus 282 IGDs---~nDl~~A~~aG~~~I~v~~~~~~ 308 (368)
=-|+ ..++.-|.++|+.+||+.+.+..
T Consensus 83 HLDHg~~~e~i~~ai~~GftSVMiDgS~lp 112 (288)
T TIGR00167 83 HLDHGASEEDCAQAVKAGFSSVMIDGSHEP 112 (288)
T ss_pred ECCCCCCHHHHHHHHHcCCCEEEecCCCCC
Confidence 3343 35688888899999999977643
No 340
>PRK13938 phosphoheptose isomerase; Provisional
Probab=21.77 E-value=5.6e+02 Score=22.62 Aligned_cols=108 Identities=11% Similarity=0.057 Sum_probs=52.9
Q ss_pred HHHHHHHhCCCcEEEEcCCChHHHHHHHH-HcC----ccc-cccE-EEeCCCC-----CCCCCCHHHHHHHHHHcCCCCC
Q 043738 210 EFVNILMHYKIPMALVSTHPRKTLETAID-SIG----IEE-YFTA-IVAAEDV-----HRGKPDPEMFVYAAQLLKFIPE 277 (368)
Q Consensus 210 elL~~Lk~~Gi~vaivSn~~~~~~~~~l~-~~g----l~~-~Fd~-iv~~e~v-----~~~KP~~~~~~~~le~lgi~p~ 277 (368)
+.+...-.+|-++.++.++....+-..+. ++- +.. -+.. ....++. ...--..+.|...... .+.+.
T Consensus 36 ~~~~~~l~~g~rI~i~G~G~S~~~A~~fa~~L~~~~~~~r~~lg~~~l~~~~~~~~a~~nd~~~~~~~~~~~~~-~~~~~ 114 (196)
T PRK13938 36 DRLIAGYRAGARVFMCGNGGSAADAQHFAAELTGHLIFDRPPLGAEALHANSSHLTAVANDYDYDTVFARALEG-SARPG 114 (196)
T ss_pred HHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHcCCCccCCcCccceEEEeCChHHHHHhhccccHHHHHHHHHHh-cCCCC
Confidence 33333445567888888776555544333 221 110 1111 1222210 0111123444455553 34555
Q ss_pred cE-EEEc---CCHh---hHHHHHHcCCeEEEEcCCCCccccCCCcEEE
Q 043738 278 RC-IVFG---NSNQ---TVEAAHDARMKCVAVASKHPVYELGAADLVV 318 (368)
Q Consensus 278 ~~-l~IG---Ds~n---Dl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv 318 (368)
++ ++|. .+.+ =++.|++.|+++|.+.+.....-...+|+++
T Consensus 115 DllI~iS~SG~t~~vi~a~~~Ak~~G~~vI~iT~~~~s~La~~aD~~l 162 (196)
T PRK13938 115 DTLFAISTSGNSMSVLRAAKTARELGVTVVAMTGESGGQLAEFADFLI 162 (196)
T ss_pred CEEEEEcCCCCCHHHHHHHHHHHHCCCEEEEEeCCCCChhhhhCCEEE
Confidence 55 4443 3333 2667788899999999655433333467655
No 341
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=21.71 E-value=82 Score=27.02 Aligned_cols=46 Identities=15% Similarity=0.224 Sum_probs=27.0
Q ss_pred cHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCc-cccccEEEeCCC
Q 043738 207 GSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGI-EEYFTAIVAAED 254 (368)
Q Consensus 207 g~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl-~~~Fd~iv~~e~ 254 (368)
.+.++|..++..|.++++...+.... .++..+|+ .++++.++..+.
T Consensus 56 ~l~~~L~~~~~~gk~I~~yGA~~kg~--tlln~~g~~~~~I~~vvD~np 102 (160)
T PF08484_consen 56 ELREFLEKLKAEGKRIAGYGAGAKGN--TLLNYFGLDNDLIDYVVDDNP 102 (160)
T ss_dssp HHHHHHHHHHHTT--EEEE---SHHH--HHHHHHT--TTTS--EEES-G
T ss_pred HHHHHHHHHHHcCCEEEEECcchHHH--HHHHHhCCCcceeEEEEeCCh
Confidence 45689999999999999988874443 46777888 456777776553
No 342
>PRK08304 stage V sporulation protein AD; Validated
Probab=21.38 E-value=1.7e+02 Score=28.42 Aligned_cols=67 Identities=13% Similarity=0.153 Sum_probs=44.1
Q ss_pred HHcCccccccEEEeCCCCCCC---CCC----HHHHHHHHHHcCCCCCc--EEEEcCCHhh----HHHHHHcCCeEEEEcC
Q 043738 238 DSIGIEEYFTAIVAAEDVHRG---KPD----PEMFVYAAQLLKFIPER--CIVFGNSNQT----VEAAHDARMKCVAVAS 304 (368)
Q Consensus 238 ~~~gl~~~Fd~iv~~e~v~~~---KP~----~~~~~~~le~lgi~p~~--~l~IGDs~nD----l~~A~~aG~~~I~v~~ 304 (368)
..-+|..+||.++.-.-.+.. |.. .+..+.++++-|+++++ .+++||..+- ...++.+|+.+..+.+
T Consensus 30 ~~gpl~~~fd~~~~d~~~Ge~swEkAeseLa~eAa~~ALekAGI~~~DID~lI~Gdll~Q~~sAs~vA~~LGIPa~dV~g 109 (337)
T PRK08304 30 GEGPLGKYFDKILDDDYCGEKSWEKAERKMMEDAIQQALQKANLKKSDIDYLLAGDLLNQIISANFAARELGIPFLGLYG 109 (337)
T ss_pred cCCCChhhCCeEecccccCCcCccccHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCcchHHHHHHHhCCcEEEEec
Confidence 344678899988766554422 222 34566778888998875 5888886532 2456778887766664
No 343
>PF10307 DUF2410: Hypothetical protein (DUF2410); InterPro: IPR018812 This entry represents a family of proteins conserved in fungi whose function is not known. There are two characteristic sequence motifs, GGWW and TGR.
Probab=21.26 E-value=5.9e+02 Score=22.69 Aligned_cols=85 Identities=15% Similarity=0.184 Sum_probs=56.5
Q ss_pred HHHHHHHHH-hCCCcEEEEcCCCh----HHHHHHHHHcCccccccEEEeCCC----CCCCCCCHHHHHHHHHHcCCCCCc
Q 043738 208 SKEFVNILM-HYKIPMALVSTHPR----KTLETAIDSIGIEEYFTAIVAAED----VHRGKPDPEMFVYAAQLLKFIPER 278 (368)
Q Consensus 208 ~~elL~~Lk-~~Gi~vaivSn~~~----~~~~~~l~~~gl~~~Fd~iv~~e~----v~~~KP~~~~~~~~le~lgi~p~~ 278 (368)
+.++.+.-. +...-++++||... ..++.+++.-|+. ||.|+-.-. ...-+-|...+..+++.+. ..++
T Consensus 59 Iv~la~~S~~~~dtltVLLTGR~e~~F~~lI~~ml~s~~L~--Fd~v~LKp~~~~~~sTm~fK~~~l~~ll~~Y~-~~~e 135 (197)
T PF10307_consen 59 IVELARLSMQDPDTLTVLLTGRRESKFSSLIERMLASKGLE--FDAVCLKPENQRFSSTMDFKQAFLEDLLHTYK-NAEE 135 (197)
T ss_pred HHHHHHHhhcCCCeeEEEEeCCCchhHHHHHHHHHhcCCCC--ccEEEeCcccccCccccHHHHHHHHHHHHhcC-CCCE
Confidence 444444333 33455678898764 3555666666777 888776543 1122234566778888877 7899
Q ss_pred EEEEcCCHhhHHHHHHc
Q 043738 279 CIVFGNSNQTVEAAHDA 295 (368)
Q Consensus 279 ~l~IGDs~nDl~~A~~a 295 (368)
+-+.+|...-+++.+..
T Consensus 136 I~IYeDR~~hvk~Fr~F 152 (197)
T PF10307_consen 136 IRIYEDRPKHVKGFRDF 152 (197)
T ss_pred EEEEcCCHHHHHHHHHH
Confidence 99999999988888764
No 344
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=21.04 E-value=54 Score=33.37 Aligned_cols=18 Identities=6% Similarity=0.130 Sum_probs=14.9
Q ss_pred cCCCceEEEEeccCcccc
Q 043738 114 MGCGWLGAIFEWEGVIIE 131 (368)
Q Consensus 114 ~~~~ik~VIFDlDGTLid 131 (368)
++...|++++|+|+||+-
T Consensus 218 ~g~~kK~LVLDLDNTLWG 235 (574)
T COG3882 218 SGKSKKALVLDLDNTLWG 235 (574)
T ss_pred hCcccceEEEecCCcccc
Confidence 455679999999999984
No 345
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=20.64 E-value=3e+02 Score=26.69 Aligned_cols=89 Identities=16% Similarity=0.235 Sum_probs=50.9
Q ss_pred HHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHH---HHHHH----cCCCCCcEEE
Q 043738 209 KEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFV---YAAQL----LKFIPERCIV 281 (368)
Q Consensus 209 ~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~---~~le~----lgi~p~~~l~ 281 (368)
+.++.+|.+.|+.+.+.+- ....+..+++.+|+. .+..+... ..+ ...... +..+. ....|+ ++
T Consensus 17 k~~I~eL~~~GheV~it~R-~~~~~~~LL~~yg~~----y~~iG~~g-~~~-~~Kl~~~~~R~~~l~~~~~~~~pD--v~ 87 (335)
T PF04007_consen 17 KNIIRELEKRGHEVLITAR-DKDETEELLDLYGID----YIVIGKHG-DSL-YGKLLESIERQYKLLKLIKKFKPD--VA 87 (335)
T ss_pred HHHHHHHHhCCCEEEEEEe-ccchHHHHHHHcCCC----eEEEcCCC-CCH-HHHHHHHHHHHHHHHHHHHhhCCC--EE
Confidence 5688899999987766655 457778899988865 33333221 111 111111 11111 123443 34
Q ss_pred Ec-CCHhhHHHHHHcCCeEEEEcCCC
Q 043738 282 FG-NSNQTVEAAHDARMKCVAVASKH 306 (368)
Q Consensus 282 IG-Ds~nDl~~A~~aG~~~I~v~~~~ 306 (368)
|+ .|..-...|.-.|+++|.+.+..
T Consensus 88 is~~s~~a~~va~~lgiP~I~f~D~e 113 (335)
T PF04007_consen 88 ISFGSPEAARVAFGLGIPSIVFNDTE 113 (335)
T ss_pred EecCcHHHHHHHHHhCCCeEEEecCc
Confidence 44 44444558899999999988543
No 346
>PRK07084 fructose-bisphosphate aldolase; Provisional
Probab=20.61 E-value=7.7e+02 Score=23.81 Aligned_cols=101 Identities=11% Similarity=0.046 Sum_probs=59.2
Q ss_pred cHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCC--CCC-C----CCCHHHHHHHHHHcCCCCCcE
Q 043738 207 GSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAED--VHR-G----KPDPEMFVYAAQLLKFIPERC 279 (368)
Q Consensus 207 g~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~--v~~-~----KP~~~~~~~~le~lgi~p~~~ 279 (368)
.++++|+..++.|+-+..+.-...+.++..++...-.. -..|+.... ... + +.-...+...+++.++.-.=+
T Consensus 11 ~~k~lL~~A~~~~yAV~AfN~~n~e~~~avi~AAee~~-sPvIlq~s~~~~~~~g~~~~~~~~~~~~~~a~~a~~~VPV~ 89 (321)
T PRK07084 11 NTREMFAKAVKGGYAIPAYNFNNMEQLQAIIQACVETK-SPVILQVSKGARKYANATLLRYMAQGAVEYAKELGCPIPIV 89 (321)
T ss_pred CHHHHHHHHHHCCceEEEEEeCCHHHHHHHHHHHHHhC-CCEEEEechhHHhhCCchHHHHHHHHHHHHHHHcCCCCcEE
Confidence 47889999999999998888777888888887542111 122222211 111 1 011122234455543222223
Q ss_pred EEEc--CCHhhHHHHHHcCCeEEEEcCCCCc
Q 043738 280 IVFG--NSNQTVEAAHDARMKCVAVASKHPV 308 (368)
Q Consensus 280 l~IG--Ds~nDl~~A~~aG~~~I~v~~~~~~ 308 (368)
+..+ ++...+..|.++|+.+||+.+.+-.
T Consensus 90 lHLDHg~~~e~i~~ai~~GftSVMiD~S~lp 120 (321)
T PRK07084 90 LHLDHGDSFELCKDCIDSGFSSVMIDGSHLP 120 (321)
T ss_pred EECCCCCCHHHHHHHHHcCCCEEEeeCCCCC
Confidence 3332 3456788889999999999977643
No 347
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=20.40 E-value=2.6e+02 Score=31.19 Aligned_cols=45 Identities=16% Similarity=0.152 Sum_probs=34.9
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccc
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYF 246 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~F 246 (368)
.++.+.....+++|.+..++++++||-+-...-...++.|+-.-.
T Consensus 704 NkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~ 748 (1140)
T KOG0208|consen 704 NKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQ 748 (1140)
T ss_pred cccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCC
Confidence 377788999999999999999999998666555666666654333
No 348
>cd01948 EAL EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.
Probab=20.39 E-value=3e+02 Score=24.17 Aligned_cols=87 Identities=10% Similarity=0.113 Sum_probs=51.1
Q ss_pred HHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCC----CC---CCCCCCHHHHHHHHHHcCCCCCcEE
Q 043738 208 SKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAE----DV---HRGKPDPEMFVYAAQLLKFIPERCI 280 (368)
Q Consensus 208 ~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e----~v---~~~KP~~~~~~~~le~lgi~p~~~l 280 (368)
+.++++.+++.|+++++---+.....-..+..+. +|.|--.. .. .....--..+...++.+|+ .++
T Consensus 134 ~~~~~~~l~~~G~~l~ld~~g~~~~~~~~l~~~~----~d~iKld~~~~~~~~~~~~~~~~l~~l~~~~~~~~~---~vi 206 (240)
T cd01948 134 ALATLRRLRALGVRIALDDFGTGYSSLSYLKRLP----VDYLKIDRSFVRDIETDPEDRAIVRAIIALAHSLGL---KVV 206 (240)
T ss_pred HHHHHHHHHHCCCeEEEeCCCCcHhhHHHHHhCC----CCEEEECHHHHHhHhcChhhHHHHHHHHHHHHHCCC---eEE
Confidence 6789999999999999854333333334444443 23322111 00 0111112334444455554 577
Q ss_pred EEc-CCHhhHHHHHHcCCeEEE
Q 043738 281 VFG-NSNQTVEAAHDARMKCVA 301 (368)
Q Consensus 281 ~IG-Ds~nDl~~A~~aG~~~I~ 301 (368)
+=| ++..+++.+...|+..+.
T Consensus 207 a~gVe~~~~~~~~~~~gi~~~Q 228 (240)
T cd01948 207 AEGVETEEQLELLRELGCDYVQ 228 (240)
T ss_pred EEecCCHHHHHHHHHcCCCeee
Confidence 777 888999999999987554
Done!