BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043742
(98 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P32295|ARG7_VIGRR Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var.
radiata GN=ARG7 PE=2 SV=1
Length = 92
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/100 (58%), Positives = 71/100 (71%), Gaps = 10/100 (10%)
Query: 1 MGFRFPGVIHAKKILRKYPYNRPQSATITAEVPKGYLAVYVGENEMKRFMIPVSYLIQSS 60
MGFR PG+ RK R ++++ + PKGYLAVYVGEN MKRF+IPVS+L Q
Sbjct: 1 MGFRLPGI-------RKTLSARNEASSKVLDAPKGYLAVYVGEN-MKRFVIPVSHLNQPL 52
Query: 61 FQDLLT--EEEFGFDHPMGGLTIPCNEDIFIDLISRLKKQ 98
FQDLL+ EEEFG+DHPMGGLTIPC+ED+F + S L Q
Sbjct: 53 FQDLLSQAEEEFGYDHPMGGLTIPCSEDLFQHITSCLSAQ 92
>sp|P33080|AX10A_SOYBN Auxin-induced protein X10A OS=Glycine max PE=2 SV=1
Length = 92
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/98 (58%), Positives = 69/98 (70%), Gaps = 10/98 (10%)
Query: 1 MGFRFPGVIHAKKILRKYPYNRPQSATITAEVPKGYLAVYVGENEMKRFMIPVSYLIQSS 60
MGFR PG+ RK Q+++ + EVPKGYL VYVG+ +M+RF+IPVSYL Q S
Sbjct: 1 MGFRLPGI-------RKTSIAANQASSKSVEVPKGYLVVYVGD-KMRRFLIPVSYLNQPS 52
Query: 61 FQDLLT--EEEFGFDHPMGGLTIPCNEDIFIDLISRLK 96
FQDLL EEEFG+DHPMGGLTIPC ED F+ + S L
Sbjct: 53 FQDLLNQAEEEFGYDHPMGGLTIPCKEDEFLTVTSHLN 90
>sp|P33081|AX15A_SOYBN Auxin-induced protein 15A OS=Glycine max PE=2 SV=1
Length = 82
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/98 (58%), Positives = 67/98 (68%), Gaps = 18/98 (18%)
Query: 1 MGFRFPGVIHAKKILRKYPYNRPQSATITAEVPKGYLAVYVGENEMKRFMIPVSYLIQSS 60
MGFR PG+ A K A+ PKGYLAVYVGE ++KRF+IPVSYL Q S
Sbjct: 1 MGFRLPGIRKASK---------------AADAPKGYLAVYVGE-KLKRFVIPVSYLNQPS 44
Query: 61 FQDLLT--EEEFGFDHPMGGLTIPCNEDIFIDLISRLK 96
FQDLL+ EEEFG+DHPMGGLTIPC+ED+F + S L
Sbjct: 45 FQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQCITSCLN 82
>sp|P33083|AX6B_SOYBN Auxin-induced protein 6B OS=Glycine max PE=2 SV=1
Length = 90
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 70/98 (71%), Gaps = 10/98 (10%)
Query: 1 MGFRFPGVIHAKKILRKYPYNRPQSATITAEVPKGYLAVYVGENEMKRFMIPVSYLIQSS 60
MGFR PG+ RK ++ Q+++ +V KGYLAVYVGE +M+RF+IPVSYL + S
Sbjct: 1 MGFRLPGI-------RKASFSANQASSKAVDVEKGYLAVYVGE-KMRRFVIPVSYLNKPS 52
Query: 61 FQDLLT--EEEFGFDHPMGGLTIPCNEDIFIDLISRLK 96
FQDLL+ EEEFG+ HP GGLTIPC+ED+F + S L
Sbjct: 53 FQDLLSQAEEEFGYHHPNGGLTIPCSEDVFQHITSFLN 90
>sp|P33079|A10A5_SOYBN Auxin-induced protein 10A5 OS=Glycine max PE=2 SV=1
Length = 93
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 9/99 (9%)
Query: 1 MGFRFPGVIHAKKILRKYPYNRPQSATITAEVPKGYLAVYVGENEMKRFMIPVSYLIQSS 60
MGFR G++ R+ + Q+A+ +VPKGY AVYVG ++M+RF IPVSYL + S
Sbjct: 1 MGFRIAGIV------RRTSFYTTQAASKRVDVPKGYAAVYVG-DKMRRFTIPVSYLNEPS 53
Query: 61 FQDLLT--EEEFGFDHPMGGLTIPCNEDIFIDLISRLKK 97
FQ+LL+ EEEFG+DHPMGGLTIPC E+ F+++ + L +
Sbjct: 54 FQELLSQAEEEFGYDHPMGGLTIPCKEEEFLNVTAHLNE 92
>sp|P33082|AXX15_SOYBN Auxin-induced protein X15 OS=Glycine max PE=2 SV=1
Length = 82
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 64/90 (71%), Gaps = 18/90 (20%)
Query: 1 MGFRFPGVIHAKKILRKYPYNRPQSATITAEVPKGYLAVYVGENEMKRFMIPVSYLIQSS 60
MGFR PG+ + A+ + PKGYLAVYVGE +MKRF+IPVSY+ Q S
Sbjct: 1 MGFRLPGI---------------RKASNAVDAPKGYLAVYVGE-KMKRFVIPVSYMNQPS 44
Query: 61 FQDLLT--EEEFGFDHPMGGLTIPCNEDIF 88
FQDLLT EEEFG+DHPMGGLTIPC+E++F
Sbjct: 45 FQDLLTQAEEEFGYDHPMGGLTIPCSEEVF 74
>sp|B3WF49|SYT_LACCB Threonine--tRNA ligase OS=Lactobacillus casei (strain BL23) GN=thrS
PE=3 SV=1
Length = 657
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 8/53 (15%)
Query: 46 MKRFMIPVSYLIQSSFQDLLTEEEFGFDHPMGGLTIPCNEDIFIDLISRLKKQ 98
M+RF+ ++ + + +F L P + IP N D+ +D ++R+KKQ
Sbjct: 522 MERFIAYLTEIYKGAFPTWLA--------PTQAVLIPVNNDLHLDYVNRIKKQ 566
>sp|Q037Z6|SYT_LACC3 Threonine--tRNA ligase OS=Lactobacillus casei (strain ATCC 334)
GN=thrS PE=3 SV=1
Length = 657
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 8/53 (15%)
Query: 46 MKRFMIPVSYLIQSSFQDLLTEEEFGFDHPMGGLTIPCNEDIFIDLISRLKKQ 98
M+RF+ ++ + + +F L P + IP N D+ +D ++R+KKQ
Sbjct: 522 MERFIAYLTEIYKGAFPTWLA--------PTQAVLIPVNNDLHLDYVNRIKKQ 566
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.143 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,728,881
Number of Sequences: 539616
Number of extensions: 1433343
Number of successful extensions: 2602
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2576
Number of HSP's gapped (non-prelim): 16
length of query: 98
length of database: 191,569,459
effective HSP length: 67
effective length of query: 31
effective length of database: 155,415,187
effective search space: 4817870797
effective search space used: 4817870797
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)