Query 043742
Match_columns 98
No_of_seqs 111 out of 644
Neff 4.8
Searched_HMMs 13730
Date Mon Mar 25 13:30:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043742.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/043742hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1y6ia2 a.261.1.1 (A:83-233) M 50.0 0.59 4.3E-05 31.5 -2.3 31 30-63 118-148 (151)
2 d1z3xa2 a.261.1.1 (A:88-235) G 49.7 0.28 2E-05 33.1 -4.0 30 30-62 118-147 (148)
3 d1nn7a_ d.42.1.2 (A:) Potassiu 40.5 3.9 0.00028 25.0 0.7 55 37-96 2-59 (105)
4 d1tjya_ c.93.1.1 (A:) AI-2 rec 40.0 12 0.00089 24.1 3.3 27 47-73 4-35 (316)
5 d1y74b1 a.194.1.1 (B:83-132) P 36.6 4.8 0.00035 22.4 0.6 13 54-66 26-38 (50)
6 d1t1da_ d.42.1.2 (A:) Shaker p 33.9 8.4 0.00061 23.2 1.6 55 37-96 3-61 (100)
7 d3kvta_ d.42.1.2 (A:) akv3.1 v 33.8 12 0.00086 22.5 2.3 57 36-96 3-62 (103)
8 d1guda_ c.93.1.1 (A:) D-allose 32.9 18 0.0013 23.3 3.3 26 48-73 3-33 (288)
9 d2r85a1 c.30.1.8 (A:1-99) 5-fo 29.7 0.34 2.5E-05 30.9 -5.9 24 29-52 64-87 (99)
10 d2f1fa1 d.58.18.6 (A:2-77) Ace 28.9 22 0.0016 20.7 2.8 21 78-98 46-66 (76)
11 d1zj8a1 d.58.36.1 (A:327-406) 26.7 37 0.0027 18.9 3.6 51 47-97 18-74 (80)
12 d1pvva1 c.78.1.1 (A:1-150) Orn 26.3 12 0.0009 24.0 1.4 16 55-71 131-150 (150)
13 d1vi7a2 d.58.11.2 (A:138-208) 25.7 20 0.0014 19.5 2.1 43 47-92 3-55 (71)
14 d3buxb3 d.93.1.1 (B:264-351) C 25.0 30 0.0022 20.9 3.0 31 33-66 36-67 (88)
15 d2pc6a2 d.58.18.6 (A:1-77) Ace 23.1 28 0.002 20.2 2.5 21 78-98 47-67 (77)
16 d2dria_ c.93.1.1 (A:) D-ribose 23.1 22 0.0016 22.4 2.2 23 49-73 6-33 (271)
17 d2pbza1 c.30.1.8 (A:4-99) 5-fo 22.7 0.56 4.1E-05 29.7 -5.8 18 28-45 58-75 (96)
18 d2nzug1 c.93.1.1 (G:58-332) Gl 22.0 26 0.0019 22.3 2.4 19 55-73 12-35 (275)
19 d1j26a_ d.50.4.1 (A:) Ict1 pro 21.9 58 0.0042 19.9 4.1 49 47-96 46-104 (112)
20 d2bkfa1 d.15.2.2 (A:1-85) Next 20.5 82 0.0059 18.5 4.6 50 37-89 7-66 (85)
21 d1owxa_ d.58.7.1 (A:) Lupus LA 20.4 26 0.0019 20.7 2.0 15 29-43 4-18 (113)
No 1
>d1y6ia2 a.261.1.1 (A:83-233) Mg-chelatase cofactor Gun4 {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=49.99 E-value=0.59 Score=31.52 Aligned_cols=31 Identities=16% Similarity=0.235 Sum_probs=19.3
Q ss_pred ccCCCCeEEEEecCCcceEEEEEecCcCchHHHH
Q 043742 30 AEVPKGYLAVYVGENEMKRFMIPVSYLIQSSFQD 63 (98)
Q Consensus 30 ~~vpkG~~aVyVG~e~~~RfvVp~~yL~hP~F~~ 63 (98)
..+|+||+|+.- .-+.-| +--+.|+||.|.+
T Consensus 118 l~AP~GHLP~~~-~lrG~~--~~~~l~~h~~~~~ 148 (151)
T d1y6ia2 118 LSAPQGHLPLLN-QLRGVR--VAESLYRHPVWSQ 148 (151)
T ss_dssp TTSCTTCCSCCC-CTTCTH--HHHHHHTSTHHHH
T ss_pred CCCCCCCCCccc-hhhhHH--HHHHHHcCcchhh
Confidence 358999999854 211111 2334788998864
No 2
>d1z3xa2 a.261.1.1 (A:88-235) GUN4-like protein Ycf53 {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=49.66 E-value=0.28 Score=33.12 Aligned_cols=30 Identities=13% Similarity=0.224 Sum_probs=18.9
Q ss_pred ccCCCCeEEEEecCCcceEEEEEecCcCchHHH
Q 043742 30 AEVPKGYLAVYVGENEMKRFMIPVSYLIQSSFQ 62 (98)
Q Consensus 30 ~~vpkG~~aVyVG~e~~~RfvVp~~yL~hP~F~ 62 (98)
..+|+||+|+.-. . +-..|=-..|+||.|.
T Consensus 118 l~AP~GHLP~~~~--l-rg~~~~~~~l~h~a~~ 147 (148)
T d1z3xa2 118 LSAPRGHLPLTNQ--L-RGVQVLNALLNHPAWT 147 (148)
T ss_dssp TTSCTTCCSCCCC--T-TCSHHHHHHHTCGGGG
T ss_pred CCCCCCCCCcCCc--c-chHHHHHHHhcCcccc
Confidence 3689999997532 1 2233445677888763
No 3
>d1nn7a_ d.42.1.2 (A:) Potassium channel kv4.2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=40.49 E-value=3.9 Score=24.99 Aligned_cols=55 Identities=13% Similarity=0.111 Sum_probs=37.5
Q ss_pred EEEEecCCcceEEEEEecCc-CchH--HHHHHhhhhcCCCCCCCceeeeCcHHHHHHHHHHHh
Q 043742 37 LAVYVGENEMKRFMIPVSYL-IQSS--FQDLLTEEEFGFDHPMGGLTIPCNEDIFIDLISRLK 96 (98)
Q Consensus 37 ~aVyVG~e~~~RfvVp~~yL-~hP~--F~~LL~eeEfG~~~~~G~L~IPC~~~~F~~vl~~l~ 96 (98)
+.+-||. ++|.+..+-| ++|. +..+.+ .. -++.+.|.+-|--|...|++|+..+.
T Consensus 2 I~LNVGG---~~f~t~~~TL~~~p~s~l~~~~~-~~-~~~~~~~~~FiDRdp~~F~~IL~ylR 59 (105)
T d1nn7a_ 2 IVLNVSG---TRFQTWQDTLERYPDTLLGSSER-DF-FYHPETQQYFFDRDPDIFRHILNFYR 59 (105)
T ss_dssp EEEEETT---EEEEECHHHHHTSCSSSTTSGGG-GG-GEEGGGTEEEECSCTTTHHHHHHHHH
T ss_pred EEEEECC---EEEEEeHHHHhcCCCCCcccccc-cc-CcCCCCCcEEEeCCHHHHHHHHHHHh
Confidence 4567886 7799998866 4553 222222 22 23333589999999999999998774
No 4
>d1tjya_ c.93.1.1 (A:) AI-2 receptor LsrB {Salmonella typhi [TaxId: 90370]}
Probab=40.04 E-value=12 Score=24.08 Aligned_cols=27 Identities=15% Similarity=0.128 Sum_probs=23.2
Q ss_pred eEEEEEecCcCchHHHHHHh-----hhhcCCC
Q 043742 47 KRFMIPVSYLIQSSFQDLLT-----EEEFGFD 73 (98)
Q Consensus 47 ~RfvVp~~yL~hP~F~~LL~-----eeEfG~~ 73 (98)
+|..+=+..+++|.|+...+ .+|+||+
T Consensus 4 ~kI~~i~~~~~npf~~~~~~g~~~~a~~~G~~ 35 (316)
T d1tjya_ 4 ERIAFIPKLVGVGFFTSGGNGAQEAGKALGID 35 (316)
T ss_dssp CEEEEECSSSSSHHHHHHHHHHHHHHHHHTCE
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHHHHHcCCE
Confidence 77888899999999999988 7778874
No 5
>d1y74b1 a.194.1.1 (B:83-132) Peripheral plasma membrane protein cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.63 E-value=4.8 Score=22.39 Aligned_cols=13 Identities=38% Similarity=0.490 Sum_probs=11.3
Q ss_pred cCcCchHHHHHHh
Q 043742 54 SYLIQSSFQDLLT 66 (98)
Q Consensus 54 ~yL~hP~F~~LL~ 66 (98)
..|+.|-|++||.
T Consensus 26 ~lL~~PH~~aLL~ 38 (50)
T d1y74b1 26 RILTQPHFMALLQ 38 (50)
T ss_dssp HHHHSHHHHHHHH
T ss_pred HHHhCHHHHHHHH
Confidence 4578999999998
No 6
>d1t1da_ d.42.1.2 (A:) Shaker potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]}
Probab=33.92 E-value=8.4 Score=23.21 Aligned_cols=55 Identities=15% Similarity=0.126 Sum_probs=37.8
Q ss_pred EEEEecCCcceEEEEEecCcCc-h--HHHHHHh-hhhcCCCCCCCceeeeCcHHHHHHHHHHHh
Q 043742 37 LAVYVGENEMKRFMIPVSYLIQ-S--SFQDLLT-EEEFGFDHPMGGLTIPCNEDIFIDLISRLK 96 (98)
Q Consensus 37 ~aVyVG~e~~~RfvVp~~yL~h-P--~F~~LL~-eeEfG~~~~~G~L~IPC~~~~F~~vl~~l~ 96 (98)
+.+-||. ++|.+..+-|.. | .+..|.. ... +..+.|.+-|--|...|.+||..+.
T Consensus 3 I~LNVGG---~~f~t~~~tL~~~p~s~l~~l~~~~~~--~~~~~g~~FiDRdp~~F~~IL~flR 61 (100)
T d1t1da_ 3 VVINVSG---LRFETQLKTLNQFPDTLLGNPQKRNRY--YDPLRNEYFFDRNRPSFDAILYFYQ 61 (100)
T ss_dssp EEEEETT---EEEEEEHHHHHTSTTSTTTCHHHHGGG--EETTTTEEEECSCSTTHHHHHHHHH
T ss_pred EEEEECC---EEEEEeHHHHhhCCCchhHHHHhCCCc--CCCCCCeEEEecCHHHHHHHHHHHh
Confidence 4567886 779998776643 3 3333333 222 2334589999999999999999874
No 7
>d3kvta_ d.42.1.2 (A:) akv3.1 voltage-gated potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]}
Probab=33.77 E-value=12 Score=22.46 Aligned_cols=57 Identities=14% Similarity=0.218 Sum_probs=39.7
Q ss_pred eEEEEecCCcceEEEEEecCcCc-h--HHHHHHhhhhcCCCCCCCceeeeCcHHHHHHHHHHHh
Q 043742 36 YLAVYVGENEMKRFMIPVSYLIQ-S--SFQDLLTEEEFGFDHPMGGLTIPCNEDIFIDLISRLK 96 (98)
Q Consensus 36 ~~aVyVG~e~~~RfvVp~~yL~h-P--~F~~LL~eeEfG~~~~~G~L~IPC~~~~F~~vl~~l~ 96 (98)
.+.+=||. ++|.+..+-|.. | .|..+.+ ....+..+.|.+-|--|...|++||..+.
T Consensus 3 rI~LNVGG---~~F~t~~~tL~~~~~s~l~~~~~-~~~~~~~~~~~~fiDRdp~~F~~IL~ylR 62 (103)
T d3kvta_ 3 RVIINVGG---IRHETYKATLKKIPATRLSRLTE-GMLNYDPVLNEYFFDRHPGVFAQIINYYR 62 (103)
T ss_dssp EEEEEETT---EEEEEEHHHHTTSCSSTTTTCCT-TSTTEETTTTEEEECSCTTTHHHHHHHHH
T ss_pred EEEEEECC---EEEEEeHHHHhhCccchhHHHHc-CCCccCCCCCcEEecCCHHHHHHHHHHHc
Confidence 45667886 789999887763 4 3333333 22233344589999999999999998774
No 8
>d1guda_ c.93.1.1 (A:) D-allose-binding protein {Escherichia coli [TaxId: 562]}
Probab=32.92 E-value=18 Score=23.27 Aligned_cols=26 Identities=12% Similarity=0.316 Sum_probs=21.3
Q ss_pred EEEEEecCcCchHHHHHHh-----hhhcCCC
Q 043742 48 RFMIPVSYLIQSSFQDLLT-----EEEFGFD 73 (98)
Q Consensus 48 RfvVp~~yL~hP~F~~LL~-----eeEfG~~ 73 (98)
-|.|=+..+++|.|..+.+ .+++||.
T Consensus 3 ~~a~i~~~~~npff~~i~~g~~~~a~~~g~~ 33 (288)
T d1guda_ 3 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVS 33 (288)
T ss_dssp EEEEEESCSSSHHHHHHHHHHHHHHHHHTCC
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHHcCCE
Confidence 3777778899999999988 5678875
No 9
>d2r85a1 c.30.1.8 (A:1-99) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Pyrococcus furiosus [TaxId: 2261]}
Probab=29.68 E-value=0.34 Score=30.94 Aligned_cols=24 Identities=21% Similarity=0.451 Sum_probs=16.7
Q ss_pred cccCCCCeEEEEecCCcceEEEEE
Q 043742 29 TAEVPKGYLAVYVGENEMKRFMIP 52 (98)
Q Consensus 29 ~~~vpkG~~aVyVG~e~~~RfvVp 52 (98)
.--||.|.|++|+|-+.-+.|-||
T Consensus 64 ~I~IPhgSfv~Y~G~d~ie~~~VP 87 (99)
T d2r85a1 64 AVVVPTGSFVAHLGIELVENMKVP 87 (99)
T ss_dssp EEECCCTTHHHHHCHHHHHTCCSC
T ss_pred EEEecCCCEEEEEcHHHHhcCCCC
Confidence 445899999999996542335554
No 10
>d2f1fa1 d.58.18.6 (A:2-77) Acetolactate synthase small subunit, IlvH {Escherichia coli [TaxId: 562]}
Probab=28.91 E-value=22 Score=20.66 Aligned_cols=21 Identities=14% Similarity=0.237 Sum_probs=18.1
Q ss_pred ceeeeCcHHHHHHHHHHHhcC
Q 043742 78 GLTIPCNEDIFIDLISRLKKQ 98 (98)
Q Consensus 78 ~L~IPC~~~~F~~vl~~l~~~ 98 (98)
.|+++++.+.+++++.+|++|
T Consensus 46 tivv~~~~~~i~qi~kQL~Kl 66 (76)
T d2f1fa1 46 TIQTVGDEKVLEQIEKQLHKL 66 (76)
T ss_dssp EEEEESCHHHHHHHHHHHHHS
T ss_pred EEEEECCHHHHHHHHHHHhCC
Confidence 478889999999999999875
No 11
>d1zj8a1 d.58.36.1 (A:327-406) Sulfite reductase NirA {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=26.73 E-value=37 Score=18.86 Aligned_cols=51 Identities=18% Similarity=0.156 Sum_probs=36.2
Q ss_pred eEEEEEecCcCchHHHHHHh-hhhcCCCC----CCCceeeeC-cHHHHHHHHHHHhc
Q 043742 47 KRFMIPVSYLIQSSFQDLLT-EEEFGFDH----PMGGLTIPC-NEDIFIDLISRLKK 97 (98)
Q Consensus 47 ~RfvVp~~yL~hP~F~~LL~-eeEfG~~~----~~G~L~IPC-~~~~F~~vl~~l~~ 97 (98)
-|.-+|.-.++......|-+ .|+||-.. ....|.|+- +.+..+.+...|++
T Consensus 18 vri~~p~G~it~~ql~~la~ia~~yg~g~i~lTtrq~l~l~~i~~~~~~~v~~~L~~ 74 (80)
T d1zj8a1 18 VGVAPIAGRVSGTILTAVADLMARAGSDRIRFTPYQKLVILDIPDALLDDLIAGLDA 74 (80)
T ss_dssp EEEBCBTTEEEHHHHHHHHHHHHHHTCCCEEECTTSCEEEEEECHHHHHHHHHHHHH
T ss_pred EEEeccCcEECHHHHHHHHHHHHHhCCCeEEECCCCcEEEcCCCHHHHHHHHHHHHH
Confidence 45667777888999999999 99998532 124566663 66777777777654
No 12
>d1pvva1 c.78.1.1 (A:1-150) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=26.32 E-value=12 Score=23.95 Aligned_cols=16 Identities=25% Similarity=0.171 Sum_probs=12.7
Q ss_pred CcCchHHHHHHh----hhhcC
Q 043742 55 YLIQSSFQDLLT----EEEFG 71 (98)
Q Consensus 55 yL~hP~F~~LL~----eeEfG 71 (98)
--+||. |+|++ .|+||
T Consensus 131 ~~~HPt-QaL~D~~Ti~e~~G 150 (150)
T d1pvva1 131 DFSHPC-QALADYMTIWEKKG 150 (150)
T ss_dssp SSCCHH-HHHHHHHHHHHHHS
T ss_pred CCCCcH-HHHHHHHHHHHHcC
Confidence 346998 88888 88887
No 13
>d1vi7a2 d.58.11.2 (A:138-208) Hypothetical protein YigZ, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=25.75 E-value=20 Score=19.52 Aligned_cols=43 Identities=12% Similarity=0.159 Sum_probs=31.1
Q ss_pred eEEEEEecCcCchHHHHHHh-------hhhcCCCCCCCceeeeCc---HHHHHHHH
Q 043742 47 KRFMIPVSYLIQSSFQDLLT-------EEEFGFDHPMGGLTIPCN---EDIFIDLI 92 (98)
Q Consensus 47 ~RfvVp~~yL~hP~F~~LL~-------eeEfG~~~~~G~L~IPC~---~~~F~~vl 92 (98)
.+|.+.++|=....++-+|+ +++|+=. -.+++.+. ++.|..-+
T Consensus 3 t~~~l~~dY~~~~~v~~~L~~~~~~i~~~~y~~~---V~l~v~vp~~~~~~f~~~l 55 (71)
T d1vi7a2 3 TEYTLQCEYHQLTGIEALLGQCDGKIINSDYQAF---VLLRVALPAAKVAEFSAKL 55 (71)
T ss_dssp EEEEEEECTTTHHHHHHHHHHTTCEEEEEEESSS---EEEEEEECSSTHHHHHHHH
T ss_pred eEEEEEeccccHHHHHHHHHHCCCEEEeeeeccE---EEEEEEECHHHHHHHHHHH
Confidence 68999999999999999998 6777743 44666554 44454433
No 14
>d3buxb3 d.93.1.1 (B:264-351) Cbl {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.96 E-value=30 Score=20.88 Aligned_cols=31 Identities=23% Similarity=0.288 Sum_probs=20.9
Q ss_pred CCCeEEE-EecCCcceEEEEEecCcCchHHHHHHh
Q 043742 33 PKGYLAV-YVGENEMKRFMIPVSYLIQSSFQDLLT 66 (98)
Q Consensus 33 pkG~~aV-yVG~e~~~RfvVp~~yL~hP~F~~LL~ 66 (98)
.-|.-|+ ||..+. =++-+-=.|.|++|+|++
T Consensus 36 rlGQWAIGyvt~dg---~IlQTIp~nk~L~qaLid 67 (88)
T d3buxb3 36 RLGQWAIGYVTADG---NILQTIPHNKPLFQALID 67 (88)
T ss_dssp STTSEEEEEECTTS---CEEEECCSSCCHHHHHHH
T ss_pred cccceeeeeeccCC---ceeeeccCccHHHHHHHh
Confidence 3444444 776653 245555589999999999
No 15
>d2pc6a2 d.58.18.6 (A:1-77) Acetolactate synthase small subunit, IlvH {Nitrosomonas europaea [TaxId: 915]}
Probab=23.12 E-value=28 Score=20.21 Aligned_cols=21 Identities=19% Similarity=0.262 Sum_probs=18.5
Q ss_pred ceeeeCcHHHHHHHHHHHhcC
Q 043742 78 GLTIPCNEDIFIDLISRLKKQ 98 (98)
Q Consensus 78 ~L~IPC~~~~F~~vl~~l~~~ 98 (98)
.|++.++...+++++++|++|
T Consensus 47 tivv~~~~~~i~qi~kQL~Kl 67 (77)
T d2pc6a2 47 TLVTNGPDEIVEQITKQLNKL 67 (77)
T ss_dssp EEEEEECHHHHHHHHHHHHHS
T ss_pred EEEEECCHHHHHHHHHHHhCC
Confidence 588899999999999999875
No 16
>d2dria_ c.93.1.1 (A:) D-ribose-binding protein {Escherichia coli, strain k-12 [TaxId: 562]}
Probab=23.06 E-value=22 Score=22.41 Aligned_cols=23 Identities=17% Similarity=0.470 Sum_probs=17.6
Q ss_pred EEEEecCcCchHHHHHHh-----hhhcCCC
Q 043742 49 FMIPVSYLIQSSFQDLLT-----EEEFGFD 73 (98)
Q Consensus 49 fvVp~~yL~hP~F~~LL~-----eeEfG~~ 73 (98)
++|| .+++|.|.++++ .+++||+
T Consensus 6 vvvp--~~~~~f~~~~~~gi~~~a~~~g~~ 33 (271)
T d2dria_ 6 LVVS--TLNNPFFVSLKDGAQKEADKLGYN 33 (271)
T ss_dssp EEES--CSSSHHHHHHHHHHHHHHHHHTCE
T ss_pred EEeC--CCCCHHHHHHHHHHHHHHHHcCCE
Confidence 3444 688999999988 6677874
No 17
>d2pbza1 c.30.1.8 (A:4-99) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Thermococcus kodakaraensis [TaxId: 311400]}
Probab=22.70 E-value=0.56 Score=29.75 Aligned_cols=18 Identities=28% Similarity=0.469 Sum_probs=14.7
Q ss_pred ccccCCCCeEEEEecCCc
Q 043742 28 ITAEVPKGYLAVYVGENE 45 (98)
Q Consensus 28 ~~~~vpkG~~aVyVG~e~ 45 (98)
..--||.|.|++|+|-+.
T Consensus 58 naI~IPhgSfv~Y~G~~~ 75 (96)
T d2pbza1 58 DGIVVPHGSFVAYLGIEA 75 (96)
T ss_dssp SSBCCCBTTHHHHSCHHH
T ss_pred CeEEEcCCCEEEEecHHH
Confidence 455689999999999654
No 18
>d2nzug1 c.93.1.1 (G:58-332) Glucose-resistance amylase regulator CcpA, C-terminal domain {Bacillus megaterium [TaxId: 1404]}
Probab=22.01 E-value=26 Score=22.29 Aligned_cols=19 Identities=5% Similarity=0.242 Sum_probs=15.3
Q ss_pred CcCchHHHHHHh-----hhhcCCC
Q 043742 55 YLIQSSFQDLLT-----EEEFGFD 73 (98)
Q Consensus 55 yL~hP~F~~LL~-----eeEfG~~ 73 (98)
.|++|.|.++++ ..|.||.
T Consensus 12 ~l~~~f~~~~~~gi~~~~~~~g~~ 35 (275)
T d2nzug1 12 DISNIFYAELARGIEDIATMYKYN 35 (275)
T ss_dssp CTTSHHHHHHHHHHHHHHHHTTCE
T ss_pred CCCCHHHHHHHHHHHHHHHHcCCE
Confidence 688999999988 6667774
No 19
>d1j26a_ d.50.4.1 (A:) Ict1 protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.87 E-value=58 Score=19.92 Aligned_cols=49 Identities=10% Similarity=0.175 Sum_probs=27.3
Q ss_pred eEEEEEec-CcCchHHHHHHhhhhcCCCCCCCceeeeCcH---------HHHHHHHHHHh
Q 043742 47 KRFMIPVS-YLIQSSFQDLLTEEEFGFDHPMGGLTIPCNE---------DIFIDLISRLK 96 (98)
Q Consensus 47 ~RfvVp~~-yL~hP~F~~LL~eeEfG~~~~~G~L~IPC~~---------~~F~~vl~~l~ 96 (98)
-||-|+-+ ++....-..|++ -.-.+-..+|.|+|-|+. +.++.+..+|.
T Consensus 46 Lr~~v~~s~~l~~~~~~~l~~-~~~~~i~~~g~l~I~s~~~RsQ~~Nr~~a~~kL~~li~ 104 (112)
T d1j26a_ 46 VRFHLASADWIEEPVRQKIAL-THKNKINKAGELVLTSESSRYQFRNLAECLQKIRDMIA 104 (112)
T ss_dssp EEEEGGGCTTSCHHHHHHHHH-HTTTTBCSSSEEEEEECCCSSHHHHHHHHHHHHHHHHH
T ss_pred EEEeccccccCCHHHHHHHHH-HhhhcccCCCeEEEEEcccCCHHHHHHHHHHHHHHHHH
Confidence 35555443 444433344444 222233335899999986 56677766664
No 20
>d2bkfa1 d.15.2.2 (A:1-85) Next to BRCA1 gene 1 protein, NBR1 (KIAA0049) {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.47 E-value=82 Score=18.51 Aligned_cols=50 Identities=12% Similarity=0.227 Sum_probs=33.2
Q ss_pred EEEEecCCcceEEEEEecCcCchHHHHHHh--hhhcCCC--------CCCCceeeeCcHHHHH
Q 043742 37 LAVYVGENEMKRFMIPVSYLIQSSFQDLLT--EEEFGFD--------HPMGGLTIPCNEDIFI 89 (98)
Q Consensus 37 ~aVyVG~e~~~RfvVp~~yL~hP~F~~LL~--eeEfG~~--------~~~G~L~IPC~~~~F~ 89 (98)
+-|..|++. +||.++.. +++.|.+|.. +.-|+.+ .++--++|.|+++.=|
T Consensus 7 vKvtf~~dt-~RF~ls~~--~~~~~~~L~~~i~~rf~l~~~~lkY~Ddd~e~v~l~~d~dl~E 66 (85)
T d2bkfa1 7 LNVTFKNEI-QSFLVSDP--ENTTWADIEAMVKVSFDLNTIQIKYLDEENEEVSINSQGEYEE 66 (85)
T ss_dssp EEEEETTEE-EEEEESCG--GGCCHHHHHHHHHHHHTCSSEEEEEECTTSCEEEECSHHHHHH
T ss_pred EEEEECCce-EEEEecCC--CCCcHHHHHHHHHHhcCcccceEEEEcCCCCEEEEecHHHHHH
Confidence 344456665 99998533 3667888888 7777742 2345789999986543
No 21
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.39 E-value=26 Score=20.66 Aligned_cols=15 Identities=27% Similarity=0.443 Sum_probs=12.9
Q ss_pred cccCCCCeEEEEecC
Q 043742 29 TAEVPKGYLAVYVGE 43 (98)
Q Consensus 29 ~~~vpkG~~aVyVG~ 43 (98)
..+.|.|++-+|||.
T Consensus 4 ~~~~~~g~~~~fvgn 18 (113)
T d1owxa_ 4 SLEEKIGCLLKFSGD 18 (113)
T ss_dssp CCSCCCCCEEEEEES
T ss_pred CcCCCCCCeEEEECC
Confidence 457899999999985
Done!