Query 043744
Match_columns 332
No_of_seqs 227 out of 1176
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 13:31:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043744.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043744hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 1E-81 3.5E-86 592.2 28.7 325 1-328 7-346 (356)
2 3oox_A Putative 2OG-Fe(II) oxy 100.0 2.8E-77 9.5E-82 553.3 27.9 289 35-326 4-308 (312)
3 1w9y_A 1-aminocyclopropane-1-c 100.0 2.2E-77 7.7E-82 554.5 23.4 287 36-330 2-296 (319)
4 1dcs_A Deacetoxycephalosporin 100.0 4.3E-73 1.5E-77 524.6 19.1 279 36-329 3-307 (311)
5 1odm_A Isopenicillin N synthas 100.0 8.7E-72 3E-76 520.3 27.4 280 36-328 7-325 (331)
6 3on7_A Oxidoreductase, iron/as 100.0 9.5E-68 3.2E-72 481.7 26.3 258 36-326 2-276 (280)
7 3dkq_A PKHD-type hydroxylase S 95.9 0.03 1E-06 48.9 8.7 79 193-289 99-194 (243)
8 2rg4_A Uncharacterized protein 93.8 1.5 5.1E-05 37.2 13.5 43 238-292 166-209 (216)
9 3itq_A Prolyl 4-hydroxylase, a 91.5 0.75 2.6E-05 39.2 8.4 103 169-289 94-211 (216)
10 2jig_A Prolyl-4 hydroxylase; h 91.1 0.54 1.8E-05 40.1 7.2 87 194-290 99-217 (224)
11 2hbt_A EGL nine homolog 1; pro 90.8 0.6 2.1E-05 40.6 7.3 184 53-289 14-212 (247)
12 3s57_A Alpha-ketoglutarate-dep 86.9 2.4 8.1E-05 35.7 8.1 82 194-287 101-200 (204)
13 2iuw_A Alkylated repair protei 85.0 4.5 0.00015 34.8 9.1 84 194-289 127-229 (238)
14 3tht_A Alkylated DNA repair pr 83.1 2 6.8E-05 39.3 6.2 105 194-306 199-328 (345)
15 3i3q_A Alpha-ketoglutarate-dep 71.4 12 0.00043 31.4 7.4 79 194-288 106-201 (211)
16 2dbn_A Hypothetical protein YB 63.2 2.7 9.4E-05 39.6 1.8 55 34-92 97-151 (461)
17 2opi_A L-fuculose-1-phosphate 51.2 8.2 0.00028 32.4 2.6 36 37-75 125-160 (212)
18 1otj_A Alpha-ketoglutarate-dep 46.5 18 0.00061 31.5 4.2 50 36-91 16-65 (283)
19 1m5a_B Insulin B chain; alpha 45.9 22 0.00075 19.9 2.9 19 51-69 8-26 (30)
20 2fk5_A Fuculose-1-phosphate al 45.6 14 0.00046 30.7 3.1 36 37-75 117-153 (200)
21 4ay7_A Methylcobalamin\: coenz 45.4 32 0.0011 30.9 5.9 44 49-92 301-348 (348)
22 1e4c_P L-fuculose 1-phosphate 44.4 12 0.00041 31.3 2.6 37 36-75 121-157 (215)
23 3o2g_A Gamma-butyrobetaine dio 44.2 11 0.00037 34.8 2.5 52 37-93 122-173 (388)
24 1pvt_A Sugar-phosphate aldolas 44.0 14 0.00047 31.5 2.9 37 36-75 160-196 (238)
25 2irp_A Putative aldolase class 42.3 14 0.00049 30.7 2.7 36 36-75 138-176 (208)
26 1oih_A Putative alkylsulfatase 38.9 27 0.00093 30.6 4.2 51 36-92 26-77 (301)
27 2v9l_A Rhamnulose-1-phosphate 38.4 15 0.00053 32.0 2.4 36 37-75 179-214 (274)
28 3pvj_A Alpha-ketoglutarate-dep 33.1 33 0.0011 29.9 3.7 51 35-91 13-63 (277)
29 2x4k_A 4-oxalocrotonate tautom 30.0 51 0.0018 20.7 3.5 25 162-186 18-42 (63)
30 3ocr_A Class II aldolase/adduc 29.8 31 0.001 30.1 2.9 38 36-75 155-192 (273)
31 3kt7_A PKHD-type hydroxylase T 29.2 1.8E+02 0.0061 28.5 8.3 105 168-292 104-231 (633)
32 3r1j_A Alpha-ketoglutarate-dep 28.5 54 0.0018 28.9 4.3 52 35-92 19-71 (301)
33 2ww6_A Fibritin, T4 fibritin; 27.6 38 0.0013 18.3 1.8 13 232-244 12-24 (27)
34 3ghf_A Septum site-determining 27.5 33 0.0011 25.9 2.4 36 40-78 51-86 (120)
35 2qt7_A Receptor-type tyrosine- 25.9 47 0.0016 23.8 2.7 31 167-197 19-51 (91)
36 1e5r_A Proline oxidase; oxidor 25.7 88 0.003 27.5 5.1 64 210-288 102-175 (290)
37 2da7_A Zinc finger homeobox pr 25.0 26 0.00088 23.9 1.1 40 150-189 14-53 (71)
38 4hti_A Receptor-type tyrosine- 24.3 59 0.002 23.7 3.1 34 167-200 26-61 (99)
39 3abf_A 4-oxalocrotonate tautom 24.2 82 0.0028 19.9 3.6 23 163-185 17-39 (64)
40 3pnt_A NAD+-glycohydrolase; gl 23.7 82 0.0028 26.2 4.1 34 35-75 208-241 (268)
41 1otf_A 4-oxalocrotonate tautom 22.7 84 0.0029 19.7 3.4 23 162-184 15-37 (62)
42 2opa_A Probable tautomerase YW 22.6 85 0.0029 19.6 3.5 23 162-184 15-37 (61)
43 2do1_A Nuclear protein HCC-1; 22.0 81 0.0028 20.3 3.0 39 40-88 7-45 (55)
44 3m0z_A Putative aldolase; MCSG 20.2 1.2E+02 0.0042 25.6 4.6 39 50-89 171-210 (249)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=1e-81 Score=592.16 Aligned_cols=325 Identities=28% Similarity=0.524 Sum_probs=286.0
Q ss_pred ChhhhcccCCcCCCCCCCCCCCCCCCCCCCC---CC---CCCCccEEeCCCCCCC---ChHHHHHHHHHHhhhcceEEEE
Q 043744 1 MEKLVSIWSKDQQYLPENYIFPPETRPGKSI---IP---LCTTIPVIDLSKASDQ---NRSNTIQQILKASKEFGFFQVI 71 (332)
Q Consensus 1 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~---~~---~~~~iPvIDls~l~~~---~~~~~~~~l~~A~~~~Gff~l~ 71 (332)
|++|+++| ++.||++|++|+++++.... .. ...+||||||+.+..+ ++.+++++|.+||++||||||+
T Consensus 7 v~~l~~~~---~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~ 83 (356)
T 1gp6_A 7 VESLAKSG---IISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLI 83 (356)
T ss_dssp HHHHHHTT---CSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred HHHHHhcC---CCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEe
Confidence 57899988 78999999999887765321 00 0236999999987522 2567899999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHhcCCChhhhhccccCCCCCCccccccCCCCCccccccccccccCCCCCcc-ccccCCCCCCc
Q 043744 72 KHEVPPKLINDTMDVFKEFFDMPAEDKVSFYSENPSKTCKLYTSSLSYDREEIHLWRDNLRHPCHPLE-ECMKLWPEKPT 150 (332)
Q Consensus 72 nhGi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~~~~y~~~~~~~~~~~~d~~e~~~~~~~p~~-~~~~~wP~~~~ 150 (332)
||||+.++++++++.+++||+||.|+|+++.........+||+........+..||+|+|+++..|.. ..+|.||+.++
T Consensus 84 nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~~~ 163 (356)
T 1gp6_A 84 NHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPS 163 (356)
T ss_dssp SCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSST
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCcch
Confidence 99999999999999999999999999999976542123455565444444567899999998765542 34789999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchhhhhhcC----CcceeEeeecCCCCCCCCCccccCCcCCCCeEEEee
Q 043744 151 RYREVVGAYSNEAKKLGSIILELIAEGLGLESGYFRNQLS----ESLLLSINHYPPCPNPSLTLGLVKHRDPNLITILLQ 226 (332)
Q Consensus 151 ~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~----~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q 226 (332)
+||+.+++|+++|.+|+.+|+++|+++||+++++|.+.+. +.+.||++|||+|++++..+|+++|||+|+||||+|
T Consensus 164 ~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~q 243 (356)
T 1gp6_A 164 DYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILH 243 (356)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEE
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEEEE
Confidence 9999999999999999999999999999999999998883 577899999999999888899999999999999999
Q ss_pred CCcCCeeEeeCCeEEEccCCCCeEEEEcchHHHHhcCCcccCcCceeecCCCCCceEEEeeeCCCCCc-eeecCccccCC
Q 043744 227 GDVCGLQVLKDGEWIGVEPLPNAFVINIGYILQVISNNKLKSVEHRAVTNSKEARTSAALFINPANDC-VIEPTKTLTEA 305 (332)
Q Consensus 227 d~~~GLqV~~~g~W~~V~p~~g~~iVniGd~l~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~-~i~p~~~~~~~ 305 (332)
|+++||||+++|+|++|+|+||++||||||+||+||||+|||++|||+.+++.+|||++||++|+.|+ +|+|+++|+++
T Consensus 244 d~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~~~~~ 323 (356)
T 1gp6_A 244 NMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSV 323 (356)
T ss_dssp CSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCCS
T ss_pred cCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChhhcCC
Confidence 99999999999999999999999999999999999999999999999998888999999999999999 99999999999
Q ss_pred CCCCCCCCcCHHHHHHHHhcCCC
Q 043744 306 SNPPIYRAFQYQEFLMDYISNPT 328 (332)
Q Consensus 306 ~~~~~y~~~t~~e~~~~~~~~~~ 328 (332)
++|++|+++||+||++.++.+++
T Consensus 324 ~~p~~y~~~t~~eyl~~~~~~~~ 346 (356)
T 1gp6_A 324 ESPAKFPPRTFAQHIEHKLFGKE 346 (356)
T ss_dssp SSCCSSCCEEHHHHHHHHHHHHH
T ss_pred CCCccCCCccHHHHHHHHHHhcc
Confidence 99999999999999999887654
No 2
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=2.8e-77 Score=553.35 Aligned_cols=289 Identities=26% Similarity=0.425 Sum_probs=255.0
Q ss_pred CCCccEEeCCCCCCCChHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHHHHHHHHhcCCChhhhhccccCCCCCCccccc
Q 043744 35 CTTIPVIDLSKASDQNRSNTIQQILKASKEFGFFQVIKHEVPPKLINDTMDVFKEFFDMPAEDKVSFYSENPSKTCKLYT 114 (332)
Q Consensus 35 ~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~~~~y~ 114 (332)
.++||||||+.+. .++.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... . ...+||.
T Consensus 4 ~~~iPvIDls~~~-~~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~-~-~~~~Gy~ 80 (312)
T 3oox_A 4 TSAIDPVSFSLYA-KDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGV-K-GGARGYI 80 (312)
T ss_dssp CCSSCCEETHHHH-HCHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSS-G-GGTSEEE
T ss_pred CCCCCeEEChHhc-ccHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccC-C-CCccccc
Confidence 4679999999765 46888999999999999999999999999999999999999999999999999765 2 3345554
Q ss_pred cCC--CCCccccccccccccCCCC-Ccc------ccccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchhh
Q 043744 115 SSL--SYDREEIHLWRDNLRHPCH-PLE------ECMKLWPEKPTRYREVVGAYSNEAKKLGSIILELIAEGLGLESGYF 185 (332)
Q Consensus 115 ~~~--~~~~~~~~d~~e~~~~~~~-p~~------~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~ 185 (332)
... ........||+|.|.++.. +.. ..+|.||+.+++||+.+++|+++|.+|+.+|+++|+++||+++++|
T Consensus 81 ~~g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f 160 (312)
T 3oox_A 81 PFGVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFF 160 (312)
T ss_dssp CCCCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTT
T ss_pred cccceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHH
Confidence 321 1122346799999988641 111 1268999999999999999999999999999999999999999999
Q ss_pred hhhc-CCcceeEeeecCCCCCCCCCccccCCcCCCCeEEEeeCCcCCeeEe-eCCeEEEccCCCCeEEEEcchHHHHhcC
Q 043744 186 RNQL-SESLLLSINHYPPCPNPSLTLGLVKHRDPNLITILLQGDVCGLQVL-KDGEWIGVEPLPNAFVINIGYILQVISN 263 (332)
Q Consensus 186 ~~~~-~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~-~~g~W~~V~p~~g~~iVniGd~l~~~Tn 263 (332)
.+.+ .+.+.||++|||||+.++..+|+++|||+|+||||+||+++||||+ ++|+|++|+|+||++||||||+||+|||
T Consensus 161 ~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~Tn 240 (312)
T 3oox_A 161 KPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLERLTN 240 (312)
T ss_dssp HHHHTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCEEEECTTSCEEECCCCSSCEEEEECHHHHHHTT
T ss_pred HHHhcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcCcCceEEECCCCcEEECCCCCCeEEEEhHHHHHHHhC
Confidence 9988 7788999999999988655599999999999999999999999998 8999999999999999999999999999
Q ss_pred CcccCcCceeecCC----CCCceEEEeeeCCCCCceeecCccccCCCCCCCCC-CcCHHHHHHHHhcC
Q 043744 264 NKLKSVEHRAVTNS----KEARTSAALFINPANDCVIEPTKTLTEASNPPIYR-AFQYQEFLMDYISN 326 (332)
Q Consensus 264 G~~ks~~HRV~~~~----~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~~y~-~~t~~e~~~~~~~~ 326 (332)
|+|||++|||+.++ +.+|||++||++|+.|++|+|+++|+++++|++|+ ++|++||++.++..
T Consensus 241 G~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~ 308 (312)
T 3oox_A 241 NVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLRE 308 (312)
T ss_dssp TSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHH
T ss_pred CeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHH
Confidence 99999999998763 46799999999999999999999999999999999 99999999999863
No 3
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=2.2e-77 Score=554.48 Aligned_cols=287 Identities=32% Similarity=0.594 Sum_probs=253.9
Q ss_pred CCccEEeCCCCCCCChHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHHHHHHHHhcCCChhhhhccccCCCCCCcccccc
Q 043744 36 TTIPVIDLSKASDQNRSNTIQQILKASKEFGFFQVIKHEVPPKLINDTMDVFKEFFDMPAEDKVSFYSENPSKTCKLYTS 115 (332)
Q Consensus 36 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~~~~y~~ 115 (332)
.+||||||+.+...++.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... .+||+.
T Consensus 2 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~-----~~Gy~~ 76 (319)
T 1w9y_A 2 ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA-----SKALEG 76 (319)
T ss_dssp CCCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHTT
T ss_pred CCCCEEECcccCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC-----CCCCCc
Confidence 469999999875245788999999999999999999999999999999999999999999999998543 234443
Q ss_pred CCCCCccccccccccccCCCCCccccccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchhhhhhc-C---C
Q 043744 116 SLSYDREEIHLWRDNLRHPCHPLEECMKLWPEKPTRYREVVGAYSNEAKKLGSIILELIAEGLGLESGYFRNQL-S---E 191 (332)
Q Consensus 116 ~~~~~~~~~~d~~e~~~~~~~p~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~-~---~ 191 (332)
. . ...+..||+|.|.++..|. ..+|.||+.++.||+.+++|+++|.+|+.+|+++|+++||+++++|.+.+ . .
T Consensus 77 ~-~-~e~~~~d~ke~~~~~~~p~-~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~ 153 (319)
T 1w9y_A 77 V-Q-AEVTDMDWESTFFLKHLPI-SNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGP 153 (319)
T ss_dssp C-C-CCGGGCCCCEEEEEEEESC-CGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCC
T ss_pred c-c-ccCCCCChhhheeeecCCc-ccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCCc
Confidence 2 1 1235679999999876443 23689999999999999999999999999999999999999999999887 4 4
Q ss_pred cceeEeeecCCCCCCCCCccccCCcCCCCeEEEeeC-CcCCeeEeeCCeEEEccCCCCeEEEEcchHHHHhcCCcccCcC
Q 043744 192 SLLLSINHYPPCPNPSLTLGLVKHRDPNLITILLQG-DVCGLQVLKDGEWIGVEPLPNAFVINIGYILQVISNNKLKSVE 270 (332)
Q Consensus 192 ~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL~qd-~~~GLqV~~~g~W~~V~p~~g~~iVniGd~l~~~TnG~~ks~~ 270 (332)
.+.||++|||||++++..+|+++|||+|+||||+|| +++||||+++|+|++|+|.||++||||||+||+||||+|||++
T Consensus 154 ~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~~ 233 (319)
T 1w9y_A 154 NFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVM 233 (319)
T ss_dssp EEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCC
T ss_pred cceeEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCCeeeccc
Confidence 568999999999998888999999999999999995 7999999999999999999999999999999999999999999
Q ss_pred ceeecCCCCCceEEEeeeCCCCCceeecCccccCCC---CCCCCCCcCHHHHHHHHhcCCCCC
Q 043744 271 HRAVTNSKEARTSAALFINPANDCVIEPTKTLTEAS---NPPIYRAFQYQEFLMDYISNPTRR 330 (332)
Q Consensus 271 HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~---~~~~y~~~t~~e~~~~~~~~~~~~ 330 (332)
|||+.+++++|||++||++|+.|++|+|+++|++++ +|++|+++||+||++.++++++..
T Consensus 234 HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~~~~~ 296 (319)
T 1w9y_A 234 HRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQA 296 (319)
T ss_dssp EEECCCSSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSS
T ss_pred ceecCCCCCCceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhhhcCc
Confidence 999998888999999999999999999999999988 599999999999999998877643
No 4
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=4.3e-73 Score=524.59 Aligned_cols=279 Identities=17% Similarity=0.267 Sum_probs=235.4
Q ss_pred CCccEEeCCCCCCCChHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHHHHHHHHhcCCC-hhhhhccccCCCCCCccccc
Q 043744 36 TTIPVIDLSKASDQNRSNTIQQILKASKEFGFFQVIKHEVPPKLINDTMDVFKEFFDMP-AEDKVSFYSENPSKTCKLYT 114 (332)
Q Consensus 36 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~fF~lP-~e~K~~~~~~~~~~~~~~y~ 114 (332)
.+||||||+.+..++.. ++|.+||++||||||+||||+.++++++++.+++||+|| .|+|+++.... ....+||.
T Consensus 3 ~~iPvIDls~l~~~~~~---~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~-~~~~~Gy~ 78 (311)
T 1dcs_A 3 TTVPTFSLAELQQGLHQ---DEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPV-PTMRRGFT 78 (311)
T ss_dssp CCCCEEEHHHHHTTCSH---HHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSS-CCSSSEEE
T ss_pred CCCcEEEchhhcCCCHH---HHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccC-CCCCCcee
Confidence 46999999976422222 399999999999999999999999999999999999999 99999998765 23445565
Q ss_pred cCCCC------CccccccccccccCCCCCccccccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHcCC----Cchh
Q 043744 115 SSLSY------DREEIHLWRDNLRHPCHPLEECMKLWPEKPTRYREVVGAYSNEAKKLGSIILELIAEGLGL----ESGY 184 (332)
Q Consensus 115 ~~~~~------~~~~~~d~~e~~~~~~~p~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl----~~~~ 184 (332)
..... ...+..||+|+|.++.. +|.|| +++||+.+++|+++|.+|+.+|+++|+++||+ ++++
T Consensus 79 ~~~~e~~~~~~~~~~~~d~~E~~~~~~~-----~n~wP--~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~ 151 (311)
T 1dcs_A 79 GLESESTAQITNTGSYSDYSMCYSMGTA-----DNLFP--SGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVEA 151 (311)
T ss_dssp EC-----------------CEEEEECSS-----SCCCS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCHHH
T ss_pred eccccccccccCCCCCCCcceeeeccCC-----CCCCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCcHhH
Confidence 43221 22457899999998753 58999 89999999999999999999999999999999 7787
Q ss_pred hhhhcCCcceeEeeecCCCCCCC--C--CccccCCcCCCCeEEEeeC-CcCC---eeEeeCCeEEEccCCCCeEEEEcch
Q 043744 185 FRNQLSESLLLSINHYPPCPNPS--L--TLGLVKHRDPNLITILLQG-DVCG---LQVLKDGEWIGVEPLPNAFVINIGY 256 (332)
Q Consensus 185 ~~~~~~~~~~lrl~~Yp~~~~~~--~--~~g~~~HtD~g~lTlL~qd-~~~G---LqV~~~g~W~~V~p~~g~~iVniGd 256 (332)
|.+. .+.||++|||||+.++ . .+|+++|||+|+||||+|| +++| |||+.+|+|++|+|+||++||||||
T Consensus 152 f~~~---~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~g~W~~V~p~pg~lvVNiGD 228 (311)
T 1dcs_A 152 FLDC---EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPYRPDAVLVFCGA 228 (311)
T ss_dssp HHSC---CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTEEEECCCCTTCEEEEECH
T ss_pred Hhhc---chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEeCCEEEeCcCCCCeEEEEHHH
Confidence 7754 7789999999998763 3 6789999999999999999 8999 9999999999999999999999999
Q ss_pred HHHHhcCCcccCcCceeecCC-----CCCceEEEeeeCCCCCceeecCccccCCCCCCCC--CCcCHHHHHHHHhcCCCC
Q 043744 257 ILQVISNNKLKSVEHRAVTNS-----KEARTSAALFINPANDCVIEPTKTLTEASNPPIY--RAFQYQEFLMDYISNPTR 329 (332)
Q Consensus 257 ~l~~~TnG~~ks~~HRV~~~~-----~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~~y--~~~t~~e~~~~~~~~~~~ 329 (332)
+||+||||+|||++|||+.++ +++||||+||++|+.|++|. +++++++++|++| +++|++||++.++++.+.
T Consensus 229 ~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~~~p~~y~~~~~t~~ey~~~~~~~~~~ 307 (311)
T 1dcs_A 229 IATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLARECGFDVSLDGETATFQDWIGGNYVNIRR 307 (311)
T ss_dssp HHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHHTTCCCCCCSSEEEHHHHHCSSCCCEEC
T ss_pred HHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccCCCCccccCCCCccHHHHHHHHHHHHhc
Confidence 999999999999999999887 67899999999999999999 9999999999999 999999999988876543
No 5
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=8.7e-72 Score=520.32 Aligned_cols=280 Identities=24% Similarity=0.353 Sum_probs=247.2
Q ss_pred CCccEEeCCCCCCC---ChHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHHHHHHHHh-cCCChhhhhccccCCCCCCcc
Q 043744 36 TTIPVIDLSKASDQ---NRSNTIQQILKASKEFGFFQVIKHEVPPKLINDTMDVFKEF-FDMPAEDKVSFYSENPSKTCK 111 (332)
Q Consensus 36 ~~iPvIDls~l~~~---~~~~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~f-F~lP~e~K~~~~~~~~~~~~~ 111 (332)
.+||||||+.+..+ ++.+++++|.+||++||||||+|||| +++++++.+++| |+||.|+|+++.. +
T Consensus 7 ~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~-------~ 76 (331)
T 1odm_A 7 ANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI-------R 76 (331)
T ss_dssp CCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC-------T
T ss_pred CCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh-------c
Confidence 57999999987422 35678999999999999999999999 999999999999 9999999999965 2
Q ss_pred ccccCC--CCCcc------ccccccccccCCCCCc-c----------ccccCCCCC--CcchHHHHHHHHHHHHHHHHHH
Q 043744 112 LYTSSL--SYDRE------EIHLWRDNLRHPCHPL-E----------ECMKLWPEK--PTRYREVVGAYSNEAKKLGSII 170 (332)
Q Consensus 112 ~y~~~~--~~~~~------~~~d~~e~~~~~~~p~-~----------~~~~~wP~~--~~~fr~~~~~y~~~~~~l~~~l 170 (332)
||.... ....+ +..||+|.|.++.... + ..+|.||+. +++||+.+++|+++|.+|+.+|
T Consensus 77 Gy~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~l 156 (331)
T 1odm_A 77 AYNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSAL 156 (331)
T ss_dssp TTCTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHH
Confidence 333211 11111 4679999999875321 1 137899988 9999999999999999999999
Q ss_pred HHHHHHHcCCCchhhhhhc-CCcceeE--eeecC------C---CCCCCC-CccccCCcCCCCeEEEeeCCcCCeeEe-e
Q 043744 171 LELIAEGLGLESGYFRNQL-SESLLLS--INHYP------P---CPNPSL-TLGLVKHRDPNLITILLQGDVCGLQVL-K 236 (332)
Q Consensus 171 l~~l~~~Lgl~~~~~~~~~-~~~~~lr--l~~Yp------~---~~~~~~-~~g~~~HtD~g~lTlL~qd~~~GLqV~-~ 236 (332)
+++|+++||+++++|.+.+ .+.+.|| ++||| | |++++. .+|+++|||+|+||||+||+++||||+ +
T Consensus 157 l~~la~~Lgl~~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~~ 236 (331)
T 1odm_A 157 LKGYALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQNLQVETA 236 (331)
T ss_dssp HHHHHHHTTSCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEECSSCCEEEEET
T ss_pred HHHHHHHhCCCHHHHHHHhcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeCCCCCEEEEcC
Confidence 9999999999999999988 7788999 99999 7 777665 899999999999999999999999999 7
Q ss_pred CCeEEEccCCCCeEEEEcchHHHHhcCCcccCcCceeecCCCCCceEEEeeeCCCCCceeecCccccCCCCCCCCCCcCH
Q 043744 237 DGEWIGVEPLPNAFVINIGYILQVISNNKLKSVEHRAVTNSKEARTSAALFINPANDCVIEPTKTLTEASNPPIYRAFQY 316 (332)
Q Consensus 237 ~g~W~~V~p~~g~~iVniGd~l~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~~y~~~t~ 316 (332)
+| |++|+|+||++||||||+||+||||+|||++|||+. ++.+|||++||++|+.|++|+|+++++++++ ++|+++|+
T Consensus 237 ~g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~-~~~~R~Sia~F~~P~~d~~i~pl~~~~~~~~-~~y~~~t~ 313 (331)
T 1odm_A 237 AG-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKW-VNAERQSLPFFVNLGYDSVIDPFDPREPNGK-SDREPLSY 313 (331)
T ss_dssp TE-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEEC-CCSCEEEEEEEECCCTTCBCCCCCTTSTTCC-CSSCCCBH
T ss_pred CC-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCC-CCCCEEEEEEEEcCCCCCEEeCCCccccccc-cCCCCccH
Confidence 88 999999999999999999999999999999999986 4789999999999999999999999999888 89999999
Q ss_pred HHHHHHHhcCCC
Q 043744 317 QEFLMDYISNPT 328 (332)
Q Consensus 317 ~e~~~~~~~~~~ 328 (332)
+||++.++++.+
T Consensus 314 ~e~l~~~~~~~~ 325 (331)
T 1odm_A 314 GDYLQNGLVSLI 325 (331)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999987654
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=9.5e-68 Score=481.74 Aligned_cols=258 Identities=26% Similarity=0.417 Sum_probs=219.1
Q ss_pred CCccEEeCCCCCCCChHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHHHHHHHHhcCCChhhhhccccCCCCCCcccccc
Q 043744 36 TTIPVIDLSKASDQNRSNTIQQILKASKEFGFFQVIKHEVPPKLINDTMDVFKEFFDMPAEDKVSFYSENPSKTCKLYTS 115 (332)
Q Consensus 36 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~~~~y~~ 115 (332)
.+||||||+.. +++++|.+||++||||||+||||+.++++++++.+++||++ |+|+++.... . ..+||..
T Consensus 2 ~~IPvIDls~~------~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~-~-~~~GY~~ 71 (280)
T 3on7_A 2 MKLETIDYRAA------DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNR-E-THDGFFP 71 (280)
T ss_dssp --CCEEETTST------THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCT-T-TCCEEEC
T ss_pred CCCCEEECCCh------hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCC-C-CCCcccc
Confidence 36999999853 26899999999999999999999999999999999999998 8999986653 2 3455553
Q ss_pred CC---CCCccccccccccccCCCCCccccccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc--hh---hhh
Q 043744 116 SL---SYDREEIHLWRDNLRHPCHPLEECMKLWPEKPTRYREVVGAYSNEAKKLGSIILELIAEGLGLES--GY---FRN 187 (332)
Q Consensus 116 ~~---~~~~~~~~d~~e~~~~~~~p~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~--~~---~~~ 187 (332)
.. ........||+|.|.+. .||..+++||+.+++|+++|.+|+.+||++|+++||++. ++ |.+
T Consensus 72 ~~~~e~~~~~~~~D~kE~~~~~---------p~~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~ 142 (280)
T 3on7_A 72 ASISETAKGHTVKDIKEYYHVY---------PWGRIPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPLPE 142 (280)
T ss_dssp CC--------CCCCSCEEEEEC---------TTSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHHH
T ss_pred CccccccCCCCcccHHHHHhcC---------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHHH
Confidence 22 11223457999988763 377778999999999999999999999999999999763 32 444
Q ss_pred hc-CC-cceeEeeecCCCCCCC--CCccccCCcCCCCeEEEeeCCcCCeeEe-eCCeEEEccCCCCeEEEEcchHHHHhc
Q 043744 188 QL-SE-SLLLSINHYPPCPNPS--LTLGLVKHRDPNLITILLQGDVCGLQVL-KDGEWIGVEPLPNAFVINIGYILQVIS 262 (332)
Q Consensus 188 ~~-~~-~~~lrl~~Yp~~~~~~--~~~g~~~HtD~g~lTlL~qd~~~GLqV~-~~g~W~~V~p~~g~~iVniGd~l~~~T 262 (332)
.+ .+ .+.||++|||||+.++ ..+|+++|||+|+||||+||+++||||+ ++|+|++|+|+||++|||+||+||+||
T Consensus 143 ~~~~~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~T 222 (280)
T 3on7_A 143 MIANSHKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTANEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQEAS 222 (280)
T ss_dssp HHTTCSSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECCSCCCEEEECTTSCEEECCCCTTCEEEEECHHHHHHT
T ss_pred HhcCCccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEecCCCCeEEEcCCCCEEECcCCCCEEEEEcChHHHHHh
Confidence 45 44 3889999999998754 4789999999999999999999999999 799999999999999999999999999
Q ss_pred CCcccCcCceeecCC----CCCceEEEeeeCCCCCceeecCccccCCCCCCCCCCcCHHHHHHHHhcC
Q 043744 263 NNKLKSVEHRAVTNS----KEARTSAALFINPANDCVIEPTKTLTEASNPPIYRAFQYQEFLMDYISN 326 (332)
Q Consensus 263 nG~~ks~~HRV~~~~----~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~~y~~~t~~e~~~~~~~~ 326 (332)
||+|||++|||+.++ ..+|||++||++|+.|++|+| ++|++||+++|+..
T Consensus 223 ng~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p--------------~ita~~~l~~rl~~ 276 (280)
T 3on7_A 223 DGYFPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSE--------------RYTADSYLMERLRE 276 (280)
T ss_dssp TTSSCCCCEEEECCTTCCTTSCEEECCEEECCCTTCBCSS--------------SCBHHHHHHHHHHH
T ss_pred CCcccCCCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECC--------------CccHHHHHHHHHHH
Confidence 999999999999864 458999999999999999974 58999999999864
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=95.89 E-value=0.03 Score=48.86 Aligned_cols=79 Identities=16% Similarity=0.119 Sum_probs=53.9
Q ss_pred ceeEeeecCCCCCCCCCccccCCcCCC-----------CeEEEee--C--C-cCC-eeEeeCCeEEEccCCCCeEEEEcc
Q 043744 193 LLLSINHYPPCPNPSLTLGLVKHRDPN-----------LITILLQ--G--D-VCG-LQVLKDGEWIGVEPLPNAFVINIG 255 (332)
Q Consensus 193 ~~lrl~~Yp~~~~~~~~~g~~~HtD~g-----------~lTlL~q--d--~-~~G-LqV~~~g~W~~V~p~~g~~iVniG 255 (332)
.-+++++|.+- --..+|.|.. .+|+++. + . .|| |.+.....=..|+|..|.+|+.-.
T Consensus 99 e~~~~~rY~~G------~~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~~~~V~P~~G~~v~F~s 172 (243)
T 3dkq_A 99 YPPLFNRYQGG------ETFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYGQQSIKLSAGSLVLYPS 172 (243)
T ss_dssp EEEEEEEECTT------CEEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTEEEEECCCTTCEEEEET
T ss_pred ccceEEEECCC------CeeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCCcEEEecCCCEEEEECC
Confidence 34889999883 2256777753 5666654 3 1 234 555554445789999999999743
Q ss_pred hHHHHhcCCcccCcCceeecCCCCCceEEEeeeC
Q 043744 256 YILQVISNNKLKSVEHRAVTNSKEARTSAALFIN 289 (332)
Q Consensus 256 d~l~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~ 289 (332)
.++|+|..-....|++++.+++
T Consensus 173 ------------~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 173 ------------SSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp ------------TSEEEECCEEEECEEEEEEEEE
T ss_pred ------------CCeEcCccccccCEEEEEEehh
Confidence 3699996544568999999885
No 8
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=93.78 E-value=1.5 Score=37.24 Aligned_cols=43 Identities=16% Similarity=0.200 Sum_probs=33.4
Q ss_pred CeEEEccCCCCeEEEEcchHHHHhcCCcccCcCceeecCC-CCCceEEEeeeCCCC
Q 043744 238 GEWIGVEPLPNAFVINIGYILQVISNNKLKSVEHRAVTNS-KEARTSAALFINPAN 292 (332)
Q Consensus 238 g~W~~V~p~~g~~iVniGd~l~~~TnG~~ks~~HRV~~~~-~~~R~Si~~F~~P~~ 292 (332)
..+..|.|.+|.+||.-+. -.|.|..+. +.+|+||+|.+.+..
T Consensus 166 ~~~~~i~P~~G~lvlFpS~------------l~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESW------------LRHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp CSEEEECCCTTEEEEEETT------------SCEEECCCCSSSCEEEEEEEEEC--
T ss_pred CCeeEecCCCCeEEEECCC------------CEEeccCCCCCCCEEEEEEEeecCC
Confidence 4577899999999988662 479998654 468999999998765
No 9
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=91.47 E-value=0.75 Score=39.17 Aligned_cols=103 Identities=15% Similarity=0.085 Sum_probs=61.1
Q ss_pred HHHHHHHHHcCCCchhhhhhcCCcceeEeeecCCCCCCCCCccccCCcCCC-----------CeEEEee--C-CcCCeeE
Q 043744 169 IILELIAEGLGLESGYFRNQLSESLLLSINHYPPCPNPSLTLGLVKHRDPN-----------LITILLQ--G-DVCGLQV 234 (332)
Q Consensus 169 ~ll~~l~~~Lgl~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g-----------~lTlL~q--d-~~~GLqV 234 (332)
.|.+.|+..+|++.+. .--+++++|.+.. -..+|.|.. .+|+++. | ..||=-+
T Consensus 94 ~i~~Ri~~~~gl~~~~-------~E~lqv~~Y~~G~------~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~ 160 (216)
T 3itq_A 94 KIEKRISSIMNVPASH-------GEGLHILNYEVDQ------QYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETF 160 (216)
T ss_dssp HHHHHHHHHHTSCGGG-------BCCCEEEEECBTC------CEEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEE
T ss_pred HHHHHHHHhcCceecc-------ccceeEEEeCCCC------ccccccCCCcCCCcccCCceEEEEEEecccCCcCceeE
Confidence 3444444456776432 2247888887732 256677753 3788775 3 2445444
Q ss_pred eeCCeEEEccCCCCeEEEEcchHHHHhcCCc-ccCcCceeecCCCCCceEEEeeeC
Q 043744 235 LKDGEWIGVEPLPNAFVINIGYILQVISNNK-LKSVEHRAVTNSKEARTSAALFIN 289 (332)
Q Consensus 235 ~~~g~W~~V~p~~g~~iVniGd~l~~~TnG~-~ks~~HRV~~~~~~~R~Si~~F~~ 289 (332)
..+. =+.|.|..|.+|+.-.- ..+|. -..++|+|..-....||++..+++
T Consensus 161 Fp~~-~~~V~P~~G~al~f~~~----~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~ 211 (216)
T 3itq_A 161 FPKL-NLSVHPRKGMAVYFEYF----YQDQSLNELTLHGGAPVTKGEKWIATQWVR 211 (216)
T ss_dssp ETTT-TEEECCCTTCEEEEECC----CSSHHHHHTTCEEECCEEESCEEEEEEEEE
T ss_pred ecCC-CCEEecCCCeEEEEecc----CCCCCCCCccccccceeccccEEEEEeeEe
Confidence 4332 27889999998876430 01121 146899996544568999988774
No 10
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=91.05 E-value=0.54 Score=40.12 Aligned_cols=87 Identities=20% Similarity=0.245 Sum_probs=53.7
Q ss_pred eeEeeecCCCCCCCCCccccCCcCC--------------CCeEEEee--C-CcCCeeEeeCC--------------eEEE
Q 043744 194 LLSINHYPPCPNPSLTLGLVKHRDP--------------NLITILLQ--G-DVCGLQVLKDG--------------EWIG 242 (332)
Q Consensus 194 ~lrl~~Yp~~~~~~~~~g~~~HtD~--------------g~lTlL~q--d-~~~GLqV~~~g--------------~W~~ 242 (332)
-+++++|.+.. ...+|.|. ..+|+|+. | ..||=-+.... .-+.
T Consensus 99 ~~qv~rY~~G~------~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~c~~~~~~ 172 (224)
T 2jig_A 99 GLQVLHYHDGQ------KYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAEQKVTGDGWSECAKRGLA 172 (224)
T ss_dssp CCEEEEEETTC------CEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTSSSCCCSTTSCTTGGGSEE
T ss_pred ceEEEecCCCc------cccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCcccccccccccccccCceE
Confidence 37788887622 24566664 24788865 3 23443333221 2488
Q ss_pred ccCCCCeEEEEcchHHHHhcCCcc-cCcCceeecCCCCCceEEEeeeCC
Q 043744 243 VEPLPNAFVINIGYILQVISNNKL-KSVEHRAVTNSKEARTSAALFINP 290 (332)
Q Consensus 243 V~p~~g~~iVniGd~l~~~TnG~~-ks~~HRV~~~~~~~R~Si~~F~~P 290 (332)
|.|..|.+|+.-- ...+|.. ..++|+|..-....||++..+++-
T Consensus 173 V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~ 217 (224)
T 2jig_A 173 VKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHV 217 (224)
T ss_dssp ECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEES
T ss_pred EecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEc
Confidence 9999999988643 1123332 578999965444689999888754
No 11
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=90.80 E-value=0.6 Score=40.63 Aligned_cols=184 Identities=16% Similarity=0.192 Sum_probs=98.0
Q ss_pred HHHHHHHHHhhhcceEEEEcCCCCHHHHHHHHHHHHHhcCCChhhhhccccCCCCCCccccccCCCCCcccccccccccc
Q 043744 53 NTIQQILKASKEFGFFQVIKHEVPPKLINDTMDVFKEFFDMPAEDKVSFYSENPSKTCKLYTSSLSYDREEIHLWRDNLR 132 (332)
Q Consensus 53 ~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~~~~y~~~~~~~~~~~~d~~e~~~ 132 (332)
...+.+.+++.+.|++.+.|- ++++..+.+.+.++.+-. +.+ +. . ...+. . ... ..+.++
T Consensus 14 ~~~~~i~~~L~~~g~~Vid~f-Ls~ee~~~L~~~~~~~~~---~g~--~~--~--a~i~~-~-~~~--------~~~~iR 73 (247)
T 2hbt_A 14 LALEYIVPCMNKHGICVVDDF-LGKETGQQIGDEVRALHD---TGK--FT--D--GQLVS-Q-KSD--------SSKDIR 73 (247)
T ss_dssp HHHHTHHHHHHHTSEEEESSS-SCHHHHHHHHHHHHHHHH---TTC--SC--S--CCEEE-C-CSS--------STTCEE
T ss_pred hhHHHHHHHhccCCEEEECCC-CCHHHHHHHHHHHHhhhh---cCC--cc--c--ccccc-c-ccc--------cccccc
Confidence 345678899999999887665 899999999988876421 000 10 0 00010 0 000 000000
Q ss_pred CCCCCccccccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchhhhhhcCCcceeEeeecCCCCCCCCCccc
Q 043744 133 HPCHPLEECMKLWPEKPTRYREVVGAYSNEAKKLGSIILELIAEGLGLESGYFRNQLSESLLLSINHYPPCPNPSLTLGL 212 (332)
Q Consensus 133 ~~~~p~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~ 212 (332)
.....|=+......+.+..|.+.+.++... +...+|+.. ..+..-+.+.+|++. ....
T Consensus 74 -------~d~i~wl~~~~~~~~~~~~l~~~i~~l~~~----ln~~lGl~~------i~~~~e~~~~~Y~~~-----G~~y 131 (247)
T 2hbt_A 74 -------GDKITWIEGKEPGCETIGLLMSSMDDLIRH----CNGKLGSYK------INGRTKAMVACYPGN-----GTGY 131 (247)
T ss_dssp -------CCEEEEECSCSTTCHHHHHHHHHHHHHHHH----TTTTSTTCC------EEEECCEEEEEECSS-----SCCE
T ss_pred -------ccceeeecccccchhHHHHHHHHHHHHHHH----HhhhcCccc------ccccceEEEEEecCC-----CCcc
Confidence 000112111001112233344444444332 222233220 011233677888851 2246
Q ss_pred cCCcCCC-----CeEEEee--C-C----cCC-eeEeeCC--eEEEccCCCCeEEEEcchHHHHhcCCcccCcCceeecCC
Q 043744 213 VKHRDPN-----LITILLQ--G-D----VCG-LQVLKDG--EWIGVEPLPNAFVINIGYILQVISNNKLKSVEHRAVTNS 277 (332)
Q Consensus 213 ~~HtD~g-----~lTlL~q--d-~----~~G-LqV~~~g--~W~~V~p~~g~~iVniGd~l~~~TnG~~ks~~HRV~~~~ 277 (332)
.+|.|.. .+|+++. + . .|| |.++.++ ....|.|..|.+|+.-.+ .-.+|.|.. .
T Consensus 132 ~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~----------~~~~H~V~p-~ 200 (247)
T 2hbt_A 132 VRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSD----------RRNPHEVQP-A 200 (247)
T ss_dssp EEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECS----------TTCCEEECC-B
T ss_pred cccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecC----------CCceeeecc-C
Confidence 6777763 5888875 2 1 144 6777544 678999999999988643 126899965 4
Q ss_pred CCCceEEEeeeC
Q 043744 278 KEARTSAALFIN 289 (332)
Q Consensus 278 ~~~R~Si~~F~~ 289 (332)
...|+||+..+.
T Consensus 201 ~~~R~sit~W~~ 212 (247)
T 2hbt_A 201 YATRYAITVWYF 212 (247)
T ss_dssp SSCEEEEEEEEE
T ss_pred CCEEEEEEEEEc
Confidence 578999987664
No 12
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=86.88 E-value=2.4 Score=35.65 Aligned_cols=82 Identities=9% Similarity=0.042 Sum_probs=50.3
Q ss_pred eeEeeecCCCCCCCCCccccCCcCCC--------CeEEEeeCCcCCeeEeeC----------CeEEEccCCCCeEEEEcc
Q 043744 194 LLSINHYPPCPNPSLTLGLVKHRDPN--------LITILLQGDVCGLQVLKD----------GEWIGVEPLPNAFVINIG 255 (332)
Q Consensus 194 ~lrl~~Yp~~~~~~~~~g~~~HtD~g--------~lTlL~qd~~~GLqV~~~----------g~W~~V~p~~g~~iVniG 255 (332)
.+-+|+|.+.. -++++|.|-. ..+|-+-. ..=+.+.+. +..+.+.-.+|+++|+-|
T Consensus 101 ~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IasvSLG~-~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~g 174 (204)
T 3s57_A 101 FVLINRYKDGS-----DHICEHRDDERELAPGSPIASVSFGA-SRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNH 174 (204)
T ss_dssp EEEEEEESSTT-----CCEEEECCCCTTBCTTCCEEEEEEES-CEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEET
T ss_pred eeEEEEECCCC-----CcccceecChhhccCCCcEEEEECCC-ceEEEEEEcCCCccccccCCceEEEECCCCCEEEECc
Confidence 34589998832 2688888862 12332211 122333321 257888889999999999
Q ss_pred hHHHHhcCCcccCcCceeecCCCCCceEEEee
Q 043744 256 YILQVISNNKLKSVEHRAVTNSKEARTSAALF 287 (332)
Q Consensus 256 d~l~~~TnG~~ks~~HRV~~~~~~~R~Si~~F 287 (332)
++=..|..|.-+... ....|+|+.|-
T Consensus 175 ~~q~~w~H~Ip~~~~------~~~~RislTFR 200 (204)
T 3s57_A 175 PTNTHWYHSLPVRKK------VLAPRVNLTFR 200 (204)
T ss_dssp THHHHEEEEECCCTT------CCSCEEEEEEE
T ss_pred hhhheeEeeccccCC------CCCCEEEEEee
Confidence 987777644332111 23579999984
No 13
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=85.02 E-value=4.5 Score=34.80 Aligned_cols=84 Identities=15% Similarity=0.073 Sum_probs=54.2
Q ss_pred eeEeeecCCCCCCCCCccccCCcCC--------CCeEEEeeCCcCCeeEee-C----------CeEEEccCCCCeEEEEc
Q 043744 194 LLSINHYPPCPNPSLTLGLVKHRDP--------NLITILLQGDVCGLQVLK-D----------GEWIGVEPLPNAFVINI 254 (332)
Q Consensus 194 ~lrl~~Yp~~~~~~~~~g~~~HtD~--------g~lTlL~qd~~~GLqV~~-~----------g~W~~V~p~~g~~iVni 254 (332)
.+-+|+|.+-. -++++|.|- .+.||-+-. ..=+.+.. . +..+.+.-.+|+++|+-
T Consensus 127 ~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IaslSLG~-~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~ 200 (238)
T 2iuw_A 127 SLLCNLYRNEK-----DSVDWHSDDEPSLGRCPIIASLSFGA-TRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIME 200 (238)
T ss_dssp EEEEEEECSTT-----CCEEEECCCCGGGCSSCCEEEEEEES-CEEEEEEECCC--------CCCEEEEEECTTCEEEEE
T ss_pred EEEEEEECCCC-----CceeCCcCChhhcCCCCcEEEEECCC-CEEEEEeccCCccccCcccCCceEEEEcCCCCEEEEC
Confidence 45689998832 268888884 222333321 12233332 1 46889999999999999
Q ss_pred chHHHHhcCCcccCcCceeecCCCCCceEEEeeeC
Q 043744 255 GYILQVISNNKLKSVEHRAVTNSKEARTSAALFIN 289 (332)
Q Consensus 255 Gd~l~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~ 289 (332)
|++=..|..|.-+.. .....|+|+.|=..
T Consensus 201 G~~r~~w~H~I~~~~------~~~~~RIsLTfR~v 229 (238)
T 2iuw_A 201 GATQADWQHRVPKEY------HSREPRVNLTFRTV 229 (238)
T ss_dssp ETHHHHEEEEECCCS------SCCCCEEEEEEECC
T ss_pred hhhhCccEecCCCcC------CCCCCEEEEEeeec
Confidence 998777776554421 12467999999763
No 14
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=83.12 E-value=2 Score=39.29 Aligned_cols=105 Identities=16% Similarity=0.199 Sum_probs=66.7
Q ss_pred eeEeeecCCCCCCCCCccccCCcCCC------CeEEEeeCCcCCeeEe-eCCeEEEccCCCCeEEEEcchHHHHhcCCcc
Q 043744 194 LLSINHYPPCPNPSLTLGLVKHRDPN------LITILLQGDVCGLQVL-KDGEWIGVEPLPNAFVINIGYILQVISNNKL 266 (332)
Q Consensus 194 ~lrl~~Yp~~~~~~~~~g~~~HtD~g------~lTlL~qd~~~GLqV~-~~g~W~~V~p~~g~~iVniGd~l~~~TnG~~ 266 (332)
.+-+|+|.+ .-++++|.|-. ..|+-+ ....=+.+. +++.++.+.-.+|+++|+-|++=..|..|.-
T Consensus 199 ~~lvN~Y~~------G~~I~~H~D~~~~~~~~I~slSL-G~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w~H~I~ 271 (345)
T 3tht_A 199 QMTINQYEP------GQGIPAHIDTHSAFEDEIVSLSL-GSEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTHGIT 271 (345)
T ss_dssp EEEEEEECT------TCCEEEECCCTTTBCSCEEEEEE-SSCEEEEEECTTSCEEEEEECTTEEEEECTHHHHTSEEEEC
T ss_pred EEEEEEecC------CCCEeeccCCchhcCCeEEEEEC-CCceeEEEccCCCceEEEEcCCCcEEEEChHHhhceEccCC
Confidence 456899987 23789999974 223322 112234444 3577999999999999999999999987765
Q ss_pred cCcCceeec------------------CCCCCceEEEeeeCCCCCceeecCccccCCC
Q 043744 267 KSVEHRAVT------------------NSKEARTSAALFINPANDCVIEPTKTLTEAS 306 (332)
Q Consensus 267 ks~~HRV~~------------------~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~ 306 (332)
+-...-+-. .+...|+|+.|=.-+...+. ...+.++|..
T Consensus 272 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~~c~-C~~~~~cd~~ 328 (345)
T 3tht_A 272 CRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQTPCN-CSYPLVCDSQ 328 (345)
T ss_dssp CCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSSCCC-CSCTTTCTTT
T ss_pred cccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCCCcC-CCCCCcccCC
Confidence 544333211 01346999999886665332 2234455543
No 15
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=71.38 E-value=12 Score=31.37 Aligned_cols=79 Identities=18% Similarity=0.098 Sum_probs=49.8
Q ss_pred eeEeeecCCCCCCCCCccccCCcCC-----C--CeEEEeeCCcCCeeEee---CCeEEEccCCCCeEEEEcchHHHHhcC
Q 043744 194 LLSINHYPPCPNPSLTLGLVKHRDP-----N--LITILLQGDVCGLQVLK---DGEWIGVEPLPNAFVINIGYILQVISN 263 (332)
Q Consensus 194 ~lrl~~Yp~~~~~~~~~g~~~HtD~-----g--~lTlL~qd~~~GLqV~~---~g~W~~V~p~~g~~iVniGd~l~~~Tn 263 (332)
.+-+|+|.+ .-++++|.|- + ++|+-+-. ..-+.+.. .+..+.+.-.+|+++|.-|++-
T Consensus 106 ~~LvN~Y~~------G~~i~~H~D~~e~~~~~pI~svSLG~-~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r----- 173 (211)
T 3i3q_A 106 ACLINRYAP------GAKLSLHQDKDEPDLRAPIVSVSLGL-PAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESR----- 173 (211)
T ss_dssp EEEEEEECT------TCCEEEECCCCCSCTTSCEEEEEEES-CEEEEECCSSTTSCCEEEEECTTCEEEECGGGT-----
T ss_pred EEEEEEEcC------CCCcccccCCCccccCCCEEEEECCC-CeEEEEecccCCCceEEEECCCCCEEEECchHH-----
Confidence 356899988 2378999993 2 22333321 22233332 3568889999999999988752
Q ss_pred CcccCcCceeecCCC-------CCceEEEeee
Q 043744 264 NKLKSVEHRAVTNSK-------EARTSAALFI 288 (332)
Q Consensus 264 G~~ks~~HRV~~~~~-------~~R~Si~~F~ 288 (332)
+ -.|.|..... ..|+|+.|-.
T Consensus 174 --~--~~H~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 174 --L--FYHGIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp --T--CCEEECCCCCCCBTTTBTCEEEEEEEC
T ss_pred --c--eEeccCcccCCcCCCCCCCEEEEEeee
Confidence 1 2577754321 3599999865
No 16
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=63.22 E-value=2.7 Score=39.59 Aligned_cols=55 Identities=13% Similarity=0.134 Sum_probs=40.3
Q ss_pred CCCCccEEeCCCCCCCChHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHHHHHHHHhcC
Q 043744 34 LCTTIPVIDLSKASDQNRSNTIQQILKASKEFGFFQVIKHEVPPKLINDTMDVFKEFFD 92 (332)
Q Consensus 34 ~~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~fF~ 92 (332)
+...||.||++.+. ...+-++..+.+++.|++.|.|. ||.+...+..+.+.+|.+
T Consensus 97 G~~~iP~i~f~di~---~~~~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 97 GDAVWPVLSYADIK---AGHVTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLD 151 (461)
T ss_dssp TCCSSCEEEHHHHH---HTCCCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHH
T ss_pred CCCCcceecHHHhc---CCCCCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHH
Confidence 34679999998653 11123455678899999999887 899888887777777753
No 17
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=51.24 E-value=8.2 Score=32.36 Aligned_cols=36 Identities=17% Similarity=0.260 Sum_probs=30.0
Q ss_pred CccEEeCCCCCCCChHHHHHHHHHHhhhcceEEEEcCCC
Q 043744 37 TIPVIDLSKASDQNRSNTIQQILKASKEFGFFQVIKHEV 75 (332)
Q Consensus 37 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi 75 (332)
.||++++... +..++++.+.+++.+.-.+.+.|||+
T Consensus 125 ~v~~~~y~~~---g~~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRP---GSPELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCT---TCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCC---CcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 6999998743 35678899999999888899999996
No 18
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=46.52 E-value=18 Score=31.48 Aligned_cols=50 Identities=16% Similarity=0.216 Sum_probs=36.5
Q ss_pred CCccEEeCCCCCCCChHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHHHHHHHHhc
Q 043744 36 TTIPVIDLSKASDQNRSNTIQQILKASKEFGFFQVIKHEVPPKLINDTMDVFKEFF 91 (332)
Q Consensus 36 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~fF 91 (332)
++|+-||++... ..+..++|.+++.++|++.+.+-.++.+.. .+.++.|=
T Consensus 16 aei~gvdl~~~l---~~~~~~~l~~~l~~~Gvv~frg~~~~~~~~---~~~~~~~G 65 (283)
T 1otj_A 16 AQISGADLTRPL---SDNQFEQLYHAVLRHQVVFLRDQAITPQQQ---RALAQRFG 65 (283)
T ss_dssp EEEESCCSSSCC---CHHHHHHHHHHHHHHSEEEECSCCCCHHHH---HHHHHTTS
T ss_pred EEEECCCcCccC---CHHHHHHHHHHHHHCCEEEECCCCCCHHHH---HHHHHHhC
Confidence 567788888632 345688999999999999999988766543 44555553
No 19
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=45.95 E-value=22 Score=19.90 Aligned_cols=19 Identities=26% Similarity=0.436 Sum_probs=16.7
Q ss_pred hHHHHHHHHHHhhhcceEE
Q 043744 51 RSNTIQQILKASKEFGFFQ 69 (332)
Q Consensus 51 ~~~~~~~l~~A~~~~Gff~ 69 (332)
...+++.|.-.|.+-|||+
T Consensus 8 Gs~LVdaL~~vCgdRGF~~ 26 (30)
T 1m5a_B 8 GSHLVEALYLVCGERGFFY 26 (30)
T ss_dssp THHHHHHHHHHHGGGCEEE
T ss_pred HHHHHHHHHHHhccCcccc
Confidence 4578889999999999998
No 20
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=45.61 E-value=14 Score=30.72 Aligned_cols=36 Identities=14% Similarity=0.192 Sum_probs=29.6
Q ss_pred CccEE-eCCCCCCCChHHHHHHHHHHhhhcceEEEEcCCC
Q 043744 37 TIPVI-DLSKASDQNRSNTIQQILKASKEFGFFQVIKHEV 75 (332)
Q Consensus 37 ~iPvI-Dls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi 75 (332)
.||++ ++.. .+..++++.+.+++.+.-.+.+.|||+
T Consensus 117 ~ip~~~~y~~---~g~~ela~~i~~~l~~~~avll~nHG~ 153 (200)
T 2fk5_A 117 EVPVLAPKTV---SATEEAALSVAEALREHRACLLRGHGA 153 (200)
T ss_dssp CEEEECCSCC---SSSHHHHHHHHHHHHHCSEEEETTTEE
T ss_pred CceEecCCCC---CCcHHHHHHHHHHhCcCCEEEECCCCc
Confidence 69999 7764 335678889999999888999999995
No 21
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=45.44 E-value=32 Score=30.88 Aligned_cols=44 Identities=7% Similarity=-0.077 Sum_probs=35.5
Q ss_pred CChHHHHHHHHHHhhhcceEEEEcCCCC----HHHHHHHHHHHHHhcC
Q 043744 49 QNRSNTIQQILKASKEFGFFQVIKHEVP----PKLINDTMDVFKEFFD 92 (332)
Q Consensus 49 ~~~~~~~~~l~~A~~~~Gff~l~nhGi~----~~l~~~~~~~~~~fF~ 92 (332)
+..+++.+++.+.++.-||..=.+|||+ .+-++.+.+++++||+
T Consensus 301 g~~e~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 301 GPVDKIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 4566777788888888888766789986 4789999999999985
No 22
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=44.43 E-value=12 Score=31.35 Aligned_cols=37 Identities=14% Similarity=0.119 Sum_probs=30.1
Q ss_pred CCccEEeCCCCCCCChHHHHHHHHHHhhhcceEEEEcCCC
Q 043744 36 TTIPVIDLSKASDQNRSNTIQQILKASKEFGFFQVIKHEV 75 (332)
Q Consensus 36 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi 75 (332)
..||++++... +..++++.+.+++.+.-.+.+.|||+
T Consensus 121 ~~ip~~~y~~~---g~~~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 121 NSIPCAPYATF---GTRELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp SCBCEECCCCT---TCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CCcceeeCCCC---CcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 36999998643 35678889999998888899999996
No 23
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=44.19 E-value=11 Score=34.84 Aligned_cols=52 Identities=13% Similarity=0.185 Sum_probs=38.7
Q ss_pred CccEEeCCCCCCCChHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHHHHHHHHhcCC
Q 043744 37 TIPVIDLSKASDQNRSNTIQQILKASKEFGFFQVIKHEVPPKLINDTMDVFKEFFDM 93 (332)
Q Consensus 37 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~fF~l 93 (332)
++|.||++.+. .+.+.++++.+|+.++|++.+.+-.++.+.. .+.++.|=.+
T Consensus 122 ~~~~~~~~~~l--~~d~~~~~~~~~l~~~Gvv~frg~~~~~~~~---~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVL--RYDEHAYKWLSTLKKVGIVRLTGASDKPGEV---SKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHH--HCHHHHHHHHHHHHHHSEEEEECCCSSTTHH---HHHHHHHSCC
T ss_pred CCCccCHHHHh--cCHHHHHHHHHHHHhcCEEEEeCCCCCHHHH---HHHHHHhCCC
Confidence 68999997642 2456788999999999999999988875543 4455566443
No 24
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=43.98 E-value=14 Score=31.54 Aligned_cols=37 Identities=19% Similarity=0.136 Sum_probs=30.3
Q ss_pred CCccEEeCCCCCCCChHHHHHHHHHHhhhcceEEEEcCCC
Q 043744 36 TTIPVIDLSKASDQNRSNTIQQILKASKEFGFFQVIKHEV 75 (332)
Q Consensus 36 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi 75 (332)
..||++++.. .+..++++++.+++++.-.+.+.|||+
T Consensus 160 ~~v~~~~y~~---~g~~ela~~i~~~l~~~~avll~nHG~ 196 (238)
T 1pvt_A 160 QGISVVEFEK---PGSVELGLKTVEKSEGKDAVLWDKHGV 196 (238)
T ss_dssp SCCEEECCCS---TTCHHHHHHHHHHTSSCSEEEETTSCE
T ss_pred CCceEecCCC---CCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 4699999864 335678889999999888899999996
No 25
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=42.26 E-value=14 Score=30.69 Aligned_cols=36 Identities=19% Similarity=0.157 Sum_probs=28.8
Q ss_pred CCccEEeCCCCCCCChHHHHHHHHHHhhhcc---eEEEEcCCC
Q 043744 36 TTIPVIDLSKASDQNRSNTIQQILKASKEFG---FFQVIKHEV 75 (332)
Q Consensus 36 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~G---ff~l~nhGi 75 (332)
..||+++.. .+..++++.+.+++.+.+ .+.+.|||+
T Consensus 138 ~~vp~~~~~----~g~~~La~~i~~~l~~~~~~~avll~nHG~ 176 (208)
T 2irp_A 138 IKIPIFPNE----QNIPLLAKEVENYFKTSEDKYGFLIRGHGL 176 (208)
T ss_dssp CEEEEECCC----SCHHHHHHHHHHHHHHCSCCSCEEETTTEE
T ss_pred cceeeecCC----CCHHHHHHHHHHHHhcCCCceEEEEcCCCC
Confidence 368998874 446788889999998875 788899996
No 26
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=38.88 E-value=27 Score=30.62 Aligned_cols=51 Identities=14% Similarity=0.055 Sum_probs=37.0
Q ss_pred CCccEEeCCCCCCCChHHHHHHHHHHhhhcceEEEEcCC-CCHHHHHHHHHHHHHhcC
Q 043744 36 TTIPVIDLSKASDQNRSNTIQQILKASKEFGFFQVIKHE-VPPKLINDTMDVFKEFFD 92 (332)
Q Consensus 36 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhG-i~~~l~~~~~~~~~~fF~ 92 (332)
++|+-||++... ..+..++|.+++.++|++.+.+-. ++. ++..+.++.|-.
T Consensus 26 aei~gvdl~~~l---~~~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~ 77 (301)
T 1oih_A 26 AEIRGVKLSPDL---DAATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGE 77 (301)
T ss_dssp EEEESCCCCTTC---CHHHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSC
T ss_pred eEEeCCCccccC---CHHHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCC
Confidence 567778887622 345688999999999999999877 775 344555666643
No 27
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=38.36 E-value=15 Score=32.04 Aligned_cols=36 Identities=8% Similarity=0.015 Sum_probs=30.2
Q ss_pred CccEEeCCCCCCCChHHHHHHHHHHhhhcceEEEEcCCC
Q 043744 37 TIPVIDLSKASDQNRSNTIQQILKASKEFGFFQVIKHEV 75 (332)
Q Consensus 37 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi 75 (332)
.||++++.. .+..++++.+.+++++.-.+.+.|||+
T Consensus 179 ~v~v~~y~~---~g~~ela~~i~~~l~~~~avll~nHG~ 214 (274)
T 2v9l_A 179 GVGILPWMV---PGTDAIGQATAQEMQKHSLVLWPFHGV 214 (274)
T ss_dssp CEEECCCCC---SSSHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred ceeEecCCC---CCCHHHHHHHHHHHccCCEEEEcCCCc
Confidence 599998864 345688899999999999999999996
No 28
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=33.11 E-value=33 Score=29.87 Aligned_cols=51 Identities=14% Similarity=0.150 Sum_probs=37.7
Q ss_pred CCCccEEeCCCCCCCChHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHHHHHHHHhc
Q 043744 35 CTTIPVIDLSKASDQNRSNTIQQILKASKEFGFFQVIKHEVPPKLINDTMDVFKEFF 91 (332)
Q Consensus 35 ~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~fF 91 (332)
.++|.=|||+... ..+..++|.+|+.++|.+.+.+-.++.+. ..+.++.|=
T Consensus 13 Gaei~gvdl~~~l---~~~~~~~l~~~l~~~gvv~fR~q~l~~~~---~~~fa~~fG 63 (277)
T 3pvj_A 13 GAQISGVDISRDI---SAEERDAIEQALLQHQVLFLRDQPINPEQ---QARFAARFG 63 (277)
T ss_dssp CEEEESCCTTSCC---CHHHHHHHHHHHHHHSEEEESSCCCCHHH---HHHHHGGGS
T ss_pred eEEEeCCCccccC---CHHHHHHHHHHHHHCCEEEECCCCCCHHH---HHHHHHHhC
Confidence 3567778888622 35678899999999999999998887643 345566653
No 29
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=29.97 E-value=51 Score=20.68 Aligned_cols=25 Identities=16% Similarity=0.194 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHHcCCCchhhh
Q 043744 162 EAKKLGSIILELIAEGLGLESGYFR 186 (332)
Q Consensus 162 ~~~~l~~~ll~~l~~~Lgl~~~~~~ 186 (332)
+-.+|+..|.+++++.||.|++.+.
T Consensus 18 ~k~~l~~~l~~~l~~~lg~p~~~v~ 42 (63)
T 2x4k_A 18 QLKNLVSEVTDAVEKTTGANRQAIH 42 (63)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGCE
T ss_pred HHHHHHHHHHHHHHHHhCcCcccEE
Confidence 3467888999999999999987543
No 30
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=29.78 E-value=31 Score=30.13 Aligned_cols=38 Identities=3% Similarity=0.009 Sum_probs=30.5
Q ss_pred CCccEEeCCCCCCCChHHHHHHHHHHhhhcceEEEEcCCC
Q 043744 36 TTIPVIDLSKASDQNRSNTIQQILKASKEFGFFQVIKHEV 75 (332)
Q Consensus 36 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi 75 (332)
..||++|+... +...++.+.+.+++.+.-.+.|.|||+
T Consensus 155 g~v~~~~y~~~--~~~~el~~~i~~~l~~~~avlL~nHG~ 192 (273)
T 3ocr_A 155 GRVAYHGYEGI--ALDLSERERLVADLGDKSVMILRNHGL 192 (273)
T ss_dssp TTEEEECCCCS--SCCHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred CCEEEECCCCC--CCCHHHHHHHHHHhCcCCEEEEcCCce
Confidence 36899998743 225677889999999999999999996
No 31
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=29.24 E-value=1.8e+02 Score=28.53 Aligned_cols=105 Identities=16% Similarity=0.087 Sum_probs=61.1
Q ss_pred HHHHHHHHHHcCCCchhhhhhcCCcceeEeeecCCCCCCCCCccccCCcCC-C--CeEEEee--C--------CcCCeeE
Q 043744 168 SIILELIAEGLGLESGYFRNQLSESLLLSINHYPPCPNPSLTLGLVKHRDP-N--LITILLQ--G--------DVCGLQV 234 (332)
Q Consensus 168 ~~ll~~l~~~Lgl~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~-g--~lTlL~q--d--------~~~GLqV 234 (332)
..++..|+...|++. +. +...-+.+.+|++ ..-...|.|. + .||+++. + .-|-|++
T Consensus 104 ~~Fr~~Ls~iTGi~~--Ls---g~~~D~~~a~Y~~------G~fL~~H~D~~~~RrvS~VLYLN~pd~~W~~e~GGeL~L 172 (633)
T 3kt7_A 104 KQYRDFFGYVTKAGK--LS---GSKTDMSINTYTK------GCHLLTHDDVIGSRRISFILYLPDPDRKWKSHYGGGLRL 172 (633)
T ss_dssp HHHHHHHHHHHTCCC--CC---SSCCCEEEEEECT------TCEEEEECCCCTTEEEEEEEECSCTTSCCCGGGBCCEEE
T ss_pred HHHHHHHHHHhCCcc--cC---CCceeEEEEEeCC------CCeeeecCCCCCCeEEEEEEEcCCCCCCCCccCCceEEE
Confidence 345566777667632 11 1111255677776 3347788884 2 3666653 1 1344888
Q ss_pred ee-C-------CeEEEccCCCCeEEEEcchHHHHhcCCcccCcCceeec-CCCCCceEEEe-eeCCCC
Q 043744 235 LK-D-------GEWIGVEPLPNAFVINIGYILQVISNNKLKSVEHRAVT-NSKEARTSAAL-FINPAN 292 (332)
Q Consensus 235 ~~-~-------g~W~~V~p~~g~~iVniGd~l~~~TnG~~ks~~HRV~~-~~~~~R~Si~~-F~~P~~ 292 (332)
+. + .....|.|.-|+++++.-. -+ .++|.|.. ..++.|+||+- |..|..
T Consensus 173 yd~d~~~~P~~d~~~~I~P~fNrLV~F~vs------p~---~S~H~V~eV~~~~~RlSItGWF~~p~~ 231 (633)
T 3kt7_A 173 FPSILPNVPHSDPSAKLVPQFNQIAFFKVL------PG---FSFHDXEEVKVDKHRLSIQGWYHIPQV 231 (633)
T ss_dssp CCEEETTEECSSCSEEECCCTTEEEEEECC------TT---TCCEEECCBCSSCCEEEEEEEEECCCT
T ss_pred ecCCCcCCCCCCceEEEecCCCeEEEEEcC------CC---CCcCCCCccCCCCCEEEEEEEeccCCC
Confidence 73 2 2477899999999987531 01 35787632 12788999964 556655
No 32
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=28.48 E-value=54 Score=28.92 Aligned_cols=52 Identities=10% Similarity=0.061 Sum_probs=37.7
Q ss_pred CCCccEEeCCCCCCCChHHHHHHHHHHhhhcceEEEEcC-CCCHHHHHHHHHHHHHhcC
Q 043744 35 CTTIPVIDLSKASDQNRSNTIQQILKASKEFGFFQVIKH-EVPPKLINDTMDVFKEFFD 92 (332)
Q Consensus 35 ~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nh-Gi~~~l~~~~~~~~~~fF~ 92 (332)
.++|+=|||+... ..+..++|.+|+.++|.+.+.+- .++.+. ..+.++.|=.
T Consensus 19 Gaei~gvdl~~~L---~d~~~~~l~~al~~~gvv~fR~q~~l~~~~---~~~fa~~fG~ 71 (301)
T 3r1j_A 19 GARVDGVRLGGDL---DDATVEQIRRALLTHKVIFFRHQHHLDDSR---QLEFARLLGT 71 (301)
T ss_dssp CEEEESCCCSTTC---CHHHHHHHHHHHHHHSEEEECCCTTCCHHH---HHHHHHHHSC
T ss_pred cceEeCCCccccC---CHHHHHHHHHHHHHCCEEEECCCCCCCHHH---HHHHHHhcCC
Confidence 3567778988422 35678899999999999999998 787653 3455566533
No 33
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=27.62 E-value=38 Score=18.27 Aligned_cols=13 Identities=38% Similarity=0.567 Sum_probs=10.1
Q ss_pred eeEeeCCeEEEcc
Q 043744 232 LQVLKDGEWIGVE 244 (332)
Q Consensus 232 LqV~~~g~W~~V~ 244 (332)
.-|+++|.|+...
T Consensus 12 ~Yvr~dg~WV~l~ 24 (27)
T 2ww6_A 12 AYVRKFGEWVLLS 24 (27)
T ss_dssp EEEEETTEEEEGG
T ss_pred eeEEEcCeEEEcc
Confidence 4567999999864
No 34
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=27.47 E-value=33 Score=25.86 Aligned_cols=36 Identities=14% Similarity=0.078 Sum_probs=26.5
Q ss_pred EEeCCCCCCCChHHHHHHHHHHhhhcceEEEEcCCCCHH
Q 043744 40 VIDLSKASDQNRSNTIQQILKASKEFGFFQVIKHEVPPK 78 (332)
Q Consensus 40 vIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~ 78 (332)
|||++.+. . .....+|.+.|+++|+.-+--.|.+.+
T Consensus 51 VlDl~~l~-~--~~dl~~L~~~l~~~gl~~vGV~g~~~~ 86 (120)
T 3ghf_A 51 VINVSGLE-S--PVNWPELHKIVTSTGLRIIGVSGCKDA 86 (120)
T ss_dssp EEEEEECC-S--SCCHHHHHHHHHTTTCEEEEEESCCCH
T ss_pred EEEccccC-C--hHHHHHHHHHHHHcCCEEEEEeCCCcH
Confidence 67988764 2 123677889999999999887776644
No 35
>2qt7_A Receptor-type tyrosine-protein phosphatase-like N; IA-2, ICA-512, protein-tyrosine phosphatase, transmembrane protein, diabetes, autoimmunity; 1.30A {Homo sapiens} PDB: 3n01_A 3np5_A 3ng8_A 3n4w_A
Probab=25.92 E-value=47 Score=23.81 Aligned_cols=31 Identities=35% Similarity=0.520 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHcCCCchhhhhhc--CCcceeEe
Q 043744 167 GSIILELIAEGLGLESGYFRNQL--SESLLLSI 197 (332)
Q Consensus 167 ~~~ll~~l~~~Lgl~~~~~~~~~--~~~~~lrl 197 (332)
+..|++.||+.|+++..+|.+.- .+.-.+|+
T Consensus 19 G~~l~~~la~ll~l~~~~Ft~i~V~g~aVTFrV 51 (91)
T 2qt7_A 19 GVKLLEILAEHVHMSSGSFINISVVGPALTFRI 51 (91)
T ss_dssp HHHHHHHHHHHHTSCGGGEEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHhcCCccceeeeEeecceEEEEe
Confidence 78899999999999999998876 55556776
No 36
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=25.65 E-value=88 Score=27.52 Aligned_cols=64 Identities=19% Similarity=0.199 Sum_probs=40.1
Q ss_pred ccccCCcCC--------CCeEEEee-CCcCCeeEeeCCeEEEccCCCCe-EEEEcchHHHHhcCCcccCcCceeecCCCC
Q 043744 210 LGLVKHRDP--------NLITILLQ-GDVCGLQVLKDGEWIGVEPLPNA-FVINIGYILQVISNNKLKSVEHRAVTNSKE 279 (332)
Q Consensus 210 ~g~~~HtD~--------g~lTlL~q-d~~~GLqV~~~g~W~~V~p~~g~-~iVniGd~l~~~TnG~~ks~~HRV~~~~~~ 279 (332)
..+.+|.|. +.+-+... ...+|..+..+|+-+..++ |. ..+| -+..|.|.+.+..
T Consensus 102 ~~I~~HrD~~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~~~~m~~--GE~w~~d-------------~~~~H~v~N~g~~ 166 (290)
T 1e5r_A 102 AIVIPHRDFVELDREVDRYFRTFMVLEDSPLAFHSNEDTVIHMRP--GEIWFLD-------------AATVHSAVNFSEI 166 (290)
T ss_dssp EEEEEECCC--------CBCCEEEECSCCTTEEEEETTEEECCCT--TEEEECC-------------TTSCEEEEESSSS
T ss_pred CEeeCccCccccccccCCceEEEeeEecCCCcEEEECCEEEecCC--CCEEEEc-------------CCCeeEEEcCCCC
Confidence 347888888 22333332 1246666666665555544 43 3322 3458999999889
Q ss_pred CceEEEeee
Q 043744 280 ARTSAALFI 288 (332)
Q Consensus 280 ~R~Si~~F~ 288 (332)
+|+.+.+=+
T Consensus 167 ~RIhLv~D~ 175 (290)
T 1e5r_A 167 SRQSLCVDF 175 (290)
T ss_dssp CCCEEEEEE
T ss_pred CeEEEEEEe
Confidence 999998766
No 37
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.96 E-value=26 Score=23.94 Aligned_cols=40 Identities=20% Similarity=0.176 Sum_probs=33.2
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchhhhhhc
Q 043744 150 TRYREVVGAYSNEAKKLGSIILELIAEGLGLESGYFRNQL 189 (332)
Q Consensus 150 ~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~ 189 (332)
.+-+..+++|+..-.+-...-+..||+.+||+.+...-.|
T Consensus 14 k~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVrVWF 53 (71)
T 2da7_A 14 KDHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVKEWF 53 (71)
T ss_dssp THHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHHHHH
Confidence 4567889999998888888889999999999988665554
No 38
>4hti_A Receptor-type tyrosine-protein phosphatase N2; phogrin, IA-2BETA, protein-tyrosine phosphatase, transmembra protein, diabetes, autoimmunity; 1.95A {Homo sapiens} PDB: 4htj_A
Probab=24.32 E-value=59 Score=23.69 Aligned_cols=34 Identities=18% Similarity=0.238 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHcCCCchhhhhhc--CCcceeEeeec
Q 043744 167 GSIILELIAEGLGLESGYFRNQL--SESLLLSINHY 200 (332)
Q Consensus 167 ~~~ll~~l~~~Lgl~~~~~~~~~--~~~~~lrl~~Y 200 (332)
+..|+..||+.|+++..+|.+.- ++.-.+|+.--
T Consensus 26 G~~l~~~la~~l~l~~~~F~~isV~g~aVTFrV~~N 61 (99)
T 4hti_A 26 GRRLVEDVARLLQVPSSAFADVEVLGPAVTFKVSAN 61 (99)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEEETTEEEEEECCC
T ss_pred HHHHHHHHHHHhCCchhheeeeeecCceEEEEeccC
Confidence 78899999999999999888775 55556775433
No 39
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=24.15 E-value=82 Score=19.92 Aligned_cols=23 Identities=17% Similarity=0.115 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHcCCCchhh
Q 043744 163 AKKLGSIILELIAEGLGLESGYF 185 (332)
Q Consensus 163 ~~~l~~~ll~~l~~~Lgl~~~~~ 185 (332)
-.+++..|.+++++.||.++++.
T Consensus 17 k~~l~~~lt~~l~~~lg~~~~~v 39 (64)
T 3abf_A 17 KRELVRRLTEMASRLLGEPYEEV 39 (64)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGE
T ss_pred HHHHHHHHHHHHHHHhCCCcccE
Confidence 45688899999999999998653
No 40
>3pnt_A NAD+-glycohydrolase; glycohydrolase, NAD+, virulence factor, hydrolase-hydrolase complex; 2.80A {Streptococcus pyogenes}
Probab=23.70 E-value=82 Score=26.19 Aligned_cols=34 Identities=18% Similarity=0.393 Sum_probs=27.2
Q ss_pred CCCccEEeCCCCCCCChHHHHHHHHHHhhhcceEEEEcCCC
Q 043744 35 CTTIPVIDLSKASDQNRSNTIQQILKASKEFGFFQVIKHEV 75 (332)
Q Consensus 35 ~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi 75 (332)
..-.|.||...++ .+.+..|.+..|+|-|+|.-|
T Consensus 208 ELimPSId~kgls-------~~dvLaaIe~kGYyEI~nPti 241 (268)
T 3pnt_A 208 ELIFPSISVKDLK-------SKAVLAEIDAKGYFEIIDPTI 241 (268)
T ss_dssp CEEECEEECTTCC-------HHHHHHHHHHHSCCEEESCEE
T ss_pred ceeecccccCCCc-------HHHHHHHHhhcCeEEecCCeE
Confidence 3447999999876 566778899999999998643
No 41
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=22.70 E-value=84 Score=19.68 Aligned_cols=23 Identities=17% Similarity=0.108 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHHHcCCCchh
Q 043744 162 EAKKLGSIILELIAEGLGLESGY 184 (332)
Q Consensus 162 ~~~~l~~~ll~~l~~~Lgl~~~~ 184 (332)
+-.+|+..|.+++.+.||++++.
T Consensus 15 ~k~~l~~~i~~~l~~~lg~p~~~ 37 (62)
T 1otf_A 15 QKETLIRQVSEAMANSLDAPLER 37 (62)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCcCccc
Confidence 44678899999999999999764
No 42
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=22.62 E-value=85 Score=19.59 Aligned_cols=23 Identities=17% Similarity=0.214 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHHHcCCCchh
Q 043744 162 EAKKLGSIILELIAEGLGLESGY 184 (332)
Q Consensus 162 ~~~~l~~~ll~~l~~~Lgl~~~~ 184 (332)
+-.+|+..|.+++.+.||++++.
T Consensus 15 qk~~l~~~i~~~l~~~lg~~~~~ 37 (61)
T 2opa_A 15 QKRNLVEKVTEAVKETTGASEEK 37 (61)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCcCcCe
Confidence 44678899999999999999764
No 43
>2do1_A Nuclear protein HCC-1; SAP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.140.2.1
Probab=21.98 E-value=81 Score=20.25 Aligned_cols=39 Identities=13% Similarity=0.228 Sum_probs=27.5
Q ss_pred EEeCCCCCCCChHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHHHHHHH
Q 043744 40 VIDLSKASDQNRSNTIQQILKASKEFGFFQVIKHEVPPKLINDTMDVFK 88 (332)
Q Consensus 40 vIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~ 88 (332)
++|++.+. +.+|.+.|+..| |.-.|.-.++++++.+...
T Consensus 7 ~~~l~klk-------V~eLK~~L~~rG---L~~~G~KaeLieRL~~~l~ 45 (55)
T 2do1_A 7 GVELHKLK-------LAELKQECLARG---LETKGIKQDLIHRLQAYLE 45 (55)
T ss_dssp CCCTTTSC-------HHHHHHHHHHHT---CCCCSCHHHHHHHHHHHHH
T ss_pred ccCHHHCc-------HHHHHHHHHHcC---CCCCCcHHHHHHHHHHHHh
Confidence 45677665 778999999999 3445666678887776443
No 44
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=20.19 E-value=1.2e+02 Score=25.64 Aligned_cols=39 Identities=8% Similarity=0.142 Sum_probs=31.0
Q ss_pred ChHHHHHHHHHHhhhcceEEEEc-CCCCHHHHHHHHHHHHH
Q 043744 50 NRSNTIQQILKASKEFGFFQVIK-HEVPPKLINDTMDVFKE 89 (332)
Q Consensus 50 ~~~~~~~~l~~A~~~~Gff~l~n-hGi~~~l~~~~~~~~~~ 89 (332)
...++.+.+.+||.+.|| .+.- -||+.+-+..+.+.+.+
T Consensus 171 ~~l~E~~avAka~a~~g~-~lEPTGGIdl~N~~~I~~i~l~ 210 (249)
T 3m0z_A 171 KHRAEFEAVAKACAAHDF-WLEPTGGIDLENYSEILKIALD 210 (249)
T ss_dssp TTHHHHHHHHHHHHHTTC-EEEEBSSCCTTTHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCc-eECCCCCccHhhHHHHHHHHHH
Confidence 478899999999999999 6664 56998877777775543
Done!