Query 043754
Match_columns 320
No_of_seqs 195 out of 850
Neff 8.2
Searched_HMMs 13730
Date Mon Mar 25 13:41:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043754.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/043754hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d5easa2 a.128.1.3 (A:221-548) 100.0 2E-100 2E-104 707.5 27.6 317 1-318 10-328 (328)
2 d1n1ba2 a.128.1.3 (A:271-598) 100.0 6E-100 5E-104 703.2 28.3 317 1-317 10-328 (328)
3 d1ps1a_ a.128.1.4 (A:) Pentale 100.0 1E-40 7.5E-45 306.2 15.5 250 8-266 13-267 (311)
4 d1di1a_ a.128.1.4 (A:) Aristol 100.0 1.4E-31 1E-35 244.0 20.7 237 17-269 21-266 (300)
5 d1kiya_ a.128.1.5 (A:) Trichod 99.6 2.1E-14 1.5E-18 130.6 17.6 192 52-265 79-275 (354)
6 d1ezfa_ a.128.1.2 (A:) Squalen 83.6 12 0.00085 31.7 19.7 222 41-281 16-251 (333)
7 d1fpsa_ a.128.1.1 (A:) Farnesy 76.7 20 0.0015 30.2 13.8 87 132-222 151-244 (348)
8 d2q80a1 a.128.1.1 (A:6-296) Ge 76.4 18 0.0013 29.6 16.2 87 129-222 103-189 (291)
9 d1rqja_ a.128.1.1 (A:) Farnesy 63.1 25 0.0019 28.8 10.3 112 143-265 154-276 (299)
10 d2d9ia1 d.68.8.1 (A:8-90) Nedd 48.7 9.6 0.0007 25.1 4.0 25 241-265 7-31 (83)
11 d1rtra_ a.128.1.1 (A:) Farnesy 38.1 50 0.0036 26.7 8.0 98 157-264 161-269 (290)
12 d1ctda_ a.39.1.5 (A:) Troponin 35.2 18 0.0013 19.3 2.8 24 287-310 9-32 (34)
13 d1d0qa_ g.41.3.2 (A:) Zinc-bin 32.0 17 0.0013 24.8 3.3 28 228-255 64-91 (102)
14 d1wy6a1 a.118.20.1 (A:7-167) H 28.6 76 0.0055 22.9 6.4 74 210-283 52-128 (161)
15 d1rxda_ c.45.1.1 (A:) Protein 26.6 18 0.0013 26.2 2.6 26 228-253 101-126 (152)
16 d1v4ea_ a.128.1.1 (A:) Octopre 22.9 1.7E+02 0.012 23.1 13.3 82 132-222 120-202 (280)
No 1
>d5easa2 a.128.1.3 (A:221-548) 5-Epi-aristolochene synthase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Probab=100.00 E-value=2.2e-100 Score=707.46 Aligned_cols=317 Identities=48% Similarity=0.892 Sum_probs=301.7
Q ss_pred CcchHHhHHHHHHHHHHHHHHhhhcCCCCCchhhhhhhhhhHHHHhccccCCCchhHHHHHHHHHHHHHHHHhhhhccCC
Q 043754 1 MLDFNILQKQHQEELRDIVRWWKNFDVPNKLPFIRDRVVEGYFWILGVYFEPKFLLARKILTKVISMASIIDDIYDAYGT 80 (320)
Q Consensus 1 kldfn~~Q~~hq~El~~l~~W~~~~~l~~~l~~~R~r~~~~y~~~~a~~feP~~s~~Rl~~ak~~~l~~~iDD~~D~~~t 80 (320)
|||||+||++||+||++++|||+++|+.+++||+|||+++||||++|++|||++|.+|++|||.+++++++||+||.|||
T Consensus 10 KlDFN~~Q~~hq~El~~l~rWw~~~~l~~~l~~aRdr~ve~Yfw~~~~~fEP~~s~~R~~~aK~~~l~ti~DD~yD~ygt 89 (328)
T d5easa2 10 KLDFNLLQMLHKQELAQVSRWWKDLDFVTTLPYARDRVVECYFWALGVYFEPQYSQARVMLVKTISMISIVDDTFDAYGT 89 (328)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCTTSCCCHHHHHHHHHHHCCSGGGHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHhhCCcccCCchHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHhhhhhcccCCC
Confidence 79999999999999999999999999977899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcchhhcccCchhHHHHHHHHHHHHHHHHHHHHhcCCcccHhhHHHHHHHHHHHHHHHHHHhhCCCCC
Q 043754 81 IEELELFATAIERWDLSAIDLLPEYIKLCYCALLDAYSEFEKDLASKGILYGLPFAKESMKILVRSYIIEARWCDQQYVP 160 (320)
Q Consensus 81 ~~el~~~~~ai~rwd~~~~~~lp~~~~~~~~~l~~~~~e~~~~~~~~~~~~~~~~l~~~w~~~~~~~~~Ea~w~~~~~~P 160 (320)
++|++.||++|+|||.++++.+|+|||++|.++++++++++.++.++||.++.++++++|++++++|++||+|+++|++|
T Consensus 90 ~eEl~~ft~ai~rWd~~~~~~lp~ymk~~~~~l~~~~~e~~~~~~~~~~~~~~~~l~~~w~~~~~~~l~EA~W~~~g~vP 169 (328)
T d5easa2 90 VKELEAYTDAIQRWDINEIDRLPDYMKISYKAILDLYKDYEKELSSAGRSHIVCHAIERMKEVVRNYNVESTWFIEGYTP 169 (328)
T ss_dssp HHHHHHHHHHHHHTCSGGGGGSCHHHHHHHHHHHHHHHHHHHHHHTTTCGGGHHHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHhcCCcchhhhCCchHHHHHHHHHHHHHHHHHHHHHhcCeeeHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHhhhhhhhhhhHHHHHHHhcCCCCCCHHHHhhccCchHHHHHHHhHHHHhcCccchHHhhhcCCcchhHHHHHhh
Q 043754 161 TMEEYMRVALLSCGYLLLSTSSFLGMEDIVTKEAFEWVSGNPKIVQASSIICRLMDDIVSHKFEQQRGHVASAVECYMKQ 240 (320)
Q Consensus 161 t~eEYl~~~~~s~g~~~~~~~~~~~~g~~l~~e~~~~~~~~~~l~~~~~~i~rL~NDi~S~~~E~~~g~~~n~V~~ym~e 240 (320)
|+||||++|.+|+|+.++++++++++|. ++++.++|++++|+++++++.++||+|||+|+++|+++|+++|+|.|||+|
T Consensus 170 t~eEYl~~~~~s~~~~~l~~~~~~~~g~-~~~e~~~~~~~~p~l~~~~~~i~RL~NDi~s~~~E~~rG~~~s~I~cym~e 248 (328)
T d5easa2 170 PVSEYLSNALATTTYYYLATTSYLGMKS-ATEQDFEWLSKNPKILEASVIICRVIDDTATYEVEKSRGQIATGIECCMRD 248 (328)
T ss_dssp CHHHHHHHHTGGGCHHHHHHHHHHTCTT-CCHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCTTCHHHHHHHH
T ss_pred ChHhhhcceeeeehHHHHHHHHHHhCCC-CcHHHHHhcccchHHHHHHHHHHHHHhhhHHHHHHhccCCCCeeEEEEecC
Confidence 9999999999999999999999999997 466788999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhhhhhhcccC-CCCCCc-hhHHHHHHHhhhccccC
Q 043754 241 HGVSEEEAVKVFREKVGNAWKDINEELMRPPVVPMPLLERVLNLARLMDVLYQNN-DSYTNP-HLMKDHVAALLKDPVFF 318 (320)
Q Consensus 241 ~g~s~eeA~~~i~~~i~~~~k~l~~~~~~~~~~p~~~~~~~~n~~r~~~~~Y~~~-D~~~~~-~~~~~~i~~~l~~p~~~ 318 (320)
+|+|+|||+++++++|+++||+||+++++++++|++++++++|+||+++++|++| ||||+| +.+|+||++|||+|||+
T Consensus 249 ~g~t~EeA~~~i~~~ie~~wk~ln~e~l~~~~~~~~~~~~~~n~ar~~~~~Y~~~~D~yt~~~~~~k~~i~~ll~epi~~ 328 (328)
T d5easa2 249 YGISTKEAMAKFQNMAETAWKDINEGLLRPTPVSTEFLTPILNLARIVEVTYIHNLDGYTHPEKVLKPHIINLLVDSIKI 328 (328)
T ss_dssp HTCCHHHHHHHHHHHHHHHHHHHHHHTSSSCSSCGGGTHHHHHHHHHHHHHTC-----------CCHHHHHHHHTCCCCC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHHhccCCcC
Confidence 9999999999999999999999999999999999999999999999999999987 999999 57999999999999996
No 2
>d1n1ba2 a.128.1.3 (A:271-598) (+)-bornyl diphosphate synthase {Garden sage (Salvia officinalis) [TaxId: 38868]}
Probab=100.00 E-value=6.5e-100 Score=703.19 Aligned_cols=317 Identities=34% Similarity=0.667 Sum_probs=296.5
Q ss_pred CcchHHhHHHHHHHHHHHHHHhhhcCCCCCchhhhhhhhhhHHHHhccccCCCchhHHHHHHHHHHHHHHHHhhhhccCC
Q 043754 1 MLDFNILQKQHQEELRDIVRWWKNFDVPNKLPFIRDRVVEGYFWILGVYFEPKFLLARKILTKVISMASIIDDIYDAYGT 80 (320)
Q Consensus 1 kldfn~~Q~~hq~El~~l~~W~~~~~l~~~l~~~R~r~~~~y~~~~a~~feP~~s~~Rl~~ak~~~l~~~iDD~~D~~~t 80 (320)
|||||+||++||+||++++|||+++||.+++||+|||++|||||++|++|||++|.+|++|||.+++++++||+||.|||
T Consensus 10 KlDFn~~Q~~hq~El~~l~rWwk~~~l~~~l~faRdr~ve~Yfwa~~~~feP~~s~~Ri~~aK~~~l~~iiDD~yD~ygt 89 (328)
T d1n1ba2 10 KLNFNIIQATHQQELKDLSRWWSRLCFPEKLPFVRDRLVESFFWAVGMFEPHQHGYQRKMAATIIVLATVIDDIYDVYGT 89 (328)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCTTSCCCHHHHHHHHHHHCCSTTCHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHhHHHhHHHHHHHHHHHHHHHHHhCCcccCCchHHHHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHhhhHHhcccCC
Confidence 79999999999999999999999999977899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcchhhcccCchhHHHHHHHHHHHHHHHHHHHHhcCCcccHhhHHHHHHHHHHHHHHHHHHhhCCCCC
Q 043754 81 IEELELFATAIERWDLSAIDLLPEYIKLCYCALLDAYSEFEKDLASKGILYGLPFAKESMKILVRSYIIEARWCDQQYVP 160 (320)
Q Consensus 81 ~~el~~~~~ai~rwd~~~~~~lp~~~~~~~~~l~~~~~e~~~~~~~~~~~~~~~~l~~~w~~~~~~~~~Ea~w~~~~~~P 160 (320)
.||++.||++|+|||+++++.||+|||.||.++++++++++.++.+.||.++.++++++|++++++|++||+|+++||+|
T Consensus 90 ~eEl~~ft~ai~rWd~~~~~~lp~ymk~~~~~l~~~~~e~~~~~~~~~g~~~~~~lk~~w~~l~~ayl~EakW~~~g~vP 169 (328)
T d1n1ba2 90 LDELELFTDTFKRWDTESITRLPYYMQLCYWGVHNYISDAAYDILKEHGFFCLQYLRKSVVDLVEAYFHEAKWYHSGYTP 169 (328)
T ss_dssp HHHHHHHHHHHHHTCSSGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHhcCCcccccCcchHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999988887888999999999999999999999999999999
Q ss_pred ChHHHHhhhhhhhhhhHHHHHHHhcCCCCCC-HHHHhhccCchHHHHHHHhHHHHhcCccchHHhhhcCCcchhHHHHHh
Q 043754 161 TMEEYMRVALLSCGYLLLSTSSFLGMEDIVT-KEAFEWVSGNPKIVQASSIICRLMDDIVSHKFEQQRGHVASAVECYMK 239 (320)
Q Consensus 161 t~eEYl~~~~~s~g~~~~~~~~~~~~g~~l~-~e~~~~~~~~~~l~~~~~~i~rL~NDi~S~~~E~~~g~~~n~V~~ym~ 239 (320)
|+||||++|.+|+|++++++++++++|..++ +++++|+.++|+++++++.|+||+|||+||++|+++|+++|+|.|||+
T Consensus 170 t~eEYl~~~~vS~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~i~RL~nDi~~~~~E~~rg~~~s~v~cymk 249 (328)
T d1n1ba2 170 SLDEYLNIAKISVASPAIISPTYFTFANASHDTAVIDSLYQYHDILCLAGIILRLPDDLGTSYFELARGDVPKTIQCYMK 249 (328)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTTSTTCCCCHHHHHHHHTTCHHHHHHHHHHHHHHHHC---------CCCCHHHHHHH
T ss_pred CHHHHHhhceehhhHHHHHHHHHHhCCCccchHHHHHHHhccHHHHHHHHHHHHHHhhhhhHHHHHhcCCcchHHHHHhc
Confidence 9999999999999999999999999987665 567999999999999999999999999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhhhhhhcccCCCCCCc-hhHHHHHHHhhhcccc
Q 043754 240 QHGVSEEEAVKVFREKVGNAWKDINEELMRPPVVPMPLLERVLNLARLMDVLYQNNDSYTNP-HLMKDHVAALLKDPVF 317 (320)
Q Consensus 240 e~g~s~eeA~~~i~~~i~~~~k~l~~~~~~~~~~p~~~~~~~~n~~r~~~~~Y~~~D~~~~~-~~~~~~i~~~l~~p~~ 317 (320)
|+|+|+|+|+++++++|+++||+||+++++++++|++|+++++|+||+++++|++|||||+| ..||+||++|||+||.
T Consensus 250 e~~~s~eeA~~~i~~~ie~~wk~ln~e~l~~~~vp~~~~~~~ln~aR~~~~~Y~~~Dgyt~~~~~~k~~I~~ll~ePvs 328 (328)
T d1n1ba2 250 ETNASEEEAVEHVKFLIREAWKDMNTAIAAGYPFPDGMVAGAANIGRVAQFIYLHGDGFGVQHSKTYEHIAGLLFEPYA 328 (328)
T ss_dssp HHCCCHHHHHHHHHHHHHHHHHHHHHHHHTCCSSCHHHHHHHHHHHHHHHHHTTTSCCC----CHHHHHHHHHHTSCCC
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHHHHhccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999 5799999999999984
No 3
>d1ps1a_ a.128.1.4 (A:) Pentalenene synthase {Streptomyces sp., UC5319 [TaxId: 1931]}
Probab=100.00 E-value=1e-40 Score=306.18 Aligned_cols=250 Identities=15% Similarity=0.116 Sum_probs=215.8
Q ss_pred HHHHHHHHHHHHH-HhhhcCCCCCchhhhhhhhhhHHHHhccccCCCchhHHH-HHHHHHHHHHHHHhhhhccC--CHHH
Q 043754 8 QKQHQEELRDIVR-WWKNFDVPNKLPFIRDRVVEGYFWILGVYFEPKFLLARK-ILTKVISMASIIDDIYDAYG--TIEE 83 (320)
Q Consensus 8 Q~~hq~El~~l~~-W~~~~~l~~~l~~~R~r~~~~y~~~~a~~feP~~s~~Rl-~~ak~~~l~~~iDD~~D~~~--t~~e 83 (320)
...|.+|++..+. |.++.|+. .-+.+|+|+.+++|+.++.++.|+++.+|+ ++++++.|+|++||+||.+. ++++
T Consensus 13 ~~p~~~~~~~~~~~W~~~~~l~-~~~~~~~~~~~~~~~~~~a~~~P~~~~~rl~l~~~~~~~~f~~DD~~D~~~~~~~~~ 91 (311)
T d1ps1a_ 13 QSPDHARAEAEQLAWPRSLGLI-RSDAAAERHLRGGYADLASRFYPHATGADLDLGVDLMSWFFLFDDLFDGPRGENPED 91 (311)
T ss_dssp CCTTHHHHHHSTTHHHHHTTSC-CSHHHHHHHHTTCHHHHHHHHCTTCCTHHHHHHHHHHHHHHHHHHTTSSGGGGCHHH
T ss_pred CCccHHHHHHHHHHHHHHcCCC-CChHHHHHHHhcCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcccccCccccCHHH
Confidence 3567888876555 77899995 447999999999999999999999999998 78999999999999999753 6777
Q ss_pred HHHHHHHHHhcchhhcccCchhHHHHHHHHHHHHHHHHHHHHhcCCcccHhhHHHHHHHHHHHHHHHHHHh-hCCCCCCh
Q 043754 84 LELFATAIERWDLSAIDLLPEYIKLCYCALLDAYSEFEKDLASKGILYGLPFAKESMKILVRSYIIEARWC-DQQYVPTM 162 (320)
Q Consensus 84 l~~~~~ai~rwd~~~~~~lp~~~~~~~~~l~~~~~e~~~~~~~~~~~~~~~~l~~~w~~~~~~~~~Ea~w~-~~~~~Pt~ 162 (320)
+..+++.+.++... ..|++.++++.++.++++++...+ +.....++++.|++|+.++++|++|+ ..+++||+
T Consensus 92 ~~~~~~~~~~~~~~---~~~~~~~~~~~~l~d~~~~~~~~~----~~~~~~r~~~~~~~~~~~~~~e~~~r~~~~~~ps~ 164 (311)
T d1ps1a_ 92 TKQLTDQVAAALDG---PLPDTAPPIAHGFADIWRRTCEGM----TPAWCARSARHWRNYFDGYVDEAESRFWNAPCDSA 164 (311)
T ss_dssp HHHHHHHHHGGGTS---CCCTTSCHHHHHHHHHHHHHHTTS----CHHHHHHHHHHHHHHHHHHHHHHTTC-------CH
T ss_pred HHHHHHHHHHhhcc---CCCcccCHHHHHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCH
Confidence 77777777766433 355666788999999998886432 33457899999999999999999996 56789999
Q ss_pred HHHHhhhhhhhhhhHHHHHHHhcCCCCCCHHHHhhccCchHHHHHHHhHHHHhcCccchHHhhhcCCcchhHHHHHhhCC
Q 043754 163 EEYMRVALLSCGYLLLSTSSFLGMEDIVTKEAFEWVSGNPKIVQASSIICRLMDDIVSHKFEQQRGHVASAVECYMKQHG 242 (320)
Q Consensus 163 eEYl~~~~~s~g~~~~~~~~~~~~g~~l~~e~~~~~~~~~~l~~~~~~i~rL~NDi~S~~~E~~~g~~~n~V~~ym~e~g 242 (320)
+||+++|+.|+|+.++++++++++|..+|++++++ +..+++.++++.+++|.|||.||+||+++|+.+|+|.|||+++|
T Consensus 165 ~eYl~~R~~~~g~~~~~~l~~~~~g~~lp~~v~~~-~~~~~l~~~~~~~~~l~NDi~S~~kE~~~g~~~N~V~vlm~~~g 243 (311)
T d1ps1a_ 165 AQYLAMRRHTIGVQPTVDLAERAGRFEVPHRVFDS-AVMSAMLQIAVDVNLLLNDIASLEKEEARGEQNNMVMILRREHG 243 (311)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHTCCCCHHHHTS-HHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCCCSHHHHHHHHHC
T ss_pred HHHHHHHHhcccHHHHHHHHHHHcCCCCCHHHHhh-cchHHHHHHHHHHHHhhhhHHHHHhhhccCCcCcHHHHHHHccC
Confidence 99999999999999999999999999999999998 78899999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHh
Q 043754 243 VSEEEAVKVFREKVGNAWKDINEE 266 (320)
Q Consensus 243 ~s~eeA~~~i~~~i~~~~k~l~~~ 266 (320)
+|.|+|++++.+++++.+++++..
T Consensus 244 ~s~~~A~~~v~~~~~~~~~~~~~~ 267 (311)
T d1ps1a_ 244 WSKSRSVSHMQNEVRARLEQYLLL 267 (311)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998865
No 4
>d1di1a_ a.128.1.4 (A:) Aristolochene synthase {Fungus (Penicillium roqueforti) [TaxId: 5082]}
Probab=99.98 E-value=1.4e-31 Score=243.96 Aligned_cols=237 Identities=12% Similarity=0.079 Sum_probs=196.5
Q ss_pred HHHHHhhhcCCCCCchhhhhhhhhhHHHHhccccCCCchhHHH-HHHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHhcc
Q 043754 17 DIVRWWKNFDVPNKLPFIRDRVVEGYFWILGVYFEPKFLLARK-ILTKVISMASIIDDIYDAYGTIEELELFATAIERWD 95 (320)
Q Consensus 17 ~l~~W~~~~~l~~~l~~~R~r~~~~y~~~~a~~feP~~s~~Rl-~~ak~~~l~~~iDD~~D~~~t~~el~~~~~ai~rwd 95 (320)
+...|..+.++. .-+..|.++..+.+...++++.|..+.+|+ +.++++.|+|++||+||. ++.++...+.+.+.++.
T Consensus 21 ~~~~w~~~~~~~-~~~~~~~~~~~~~~~~~~a~~~P~a~~e~L~l~a~~~~w~f~~DD~~d~-~~~~~~~~~~~~~~~~~ 98 (300)
T d1di1a_ 21 EVDGYFLENWKF-PSFKAVRTFLDAKFSEVTCLYFPLALDDRIHFACRLLTVLFLIDDVLEH-MSFADGEAYNNRLIPIS 98 (300)
T ss_dssp HHHHHHHHHSCC-SSHHHHHHHHHHCHHHHHHHHCTTSCTTTHHHHHHHHHHHHHHHHHHHH-SCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCC-CCHHHHHHHHhCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHhhhhcc-CChhhHHHHHHHHHHHh
Confidence 355699777763 335788888887555455566699999998 579999999999999996 46778888888877754
Q ss_pred hhhcccCchhHHHHHHHHHHHHHHHHHHHHhcCCcccHhhHHHHHHHHHHHHHHHHHHhhCCCCCChHHHHhhhhhhhhh
Q 043754 96 LSAIDLLPEYIKLCYCALLDAYSEFEKDLASKGILYGLPFAKESMKILVRSYIIEARWCDQQYVPTMEEYMRVALLSCGY 175 (320)
Q Consensus 96 ~~~~~~lp~~~~~~~~~l~~~~~e~~~~~~~~~~~~~~~~l~~~w~~~~~~~~~Ea~w~~~~~~Pt~eEYl~~~~~s~g~ 175 (320)
... .+|....++..++.++++++... .+++.+.+.+++.+++.|++|+..|++||++||++.|..++|+
T Consensus 99 ~~~--~~~~~~~~~~~~l~d~~~~~~~~---------~~~~~~~~~~~~~~~~~e~~~~~~~~~psl~eYl~~R~~~~g~ 167 (300)
T d1di1a_ 99 RGD--VLPDRTKPEEFILYDLWESMRAH---------DAELANEVLEPTFVFMRAQTDRARLSIHELGHYLEYREKDVGK 167 (300)
T ss_dssp HTS--SCCCTTCHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHTTTCCCCCCCCSHHHHHHHHHTCHHH
T ss_pred cCC--CCCCCcCHHHHHHHHHHHHHHHH---------hHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHhcccH
Confidence 332 23455556777888888877432 3456778888999999999999999999999999999999999
Q ss_pred hHHHHHHHhcCCCCCCHHHHhhccCchHHHHHHHhHHHHhcCccchHHhhhcCCc--------chhHHHHHhhCCCCHHH
Q 043754 176 LLLSTSSFLGMEDIVTKEAFEWVSGNPKIVQASSIICRLMDDIVSHKFEQQRGHV--------ASAVECYMKQHGVSEEE 247 (320)
Q Consensus 176 ~~~~~~~~~~~g~~l~~e~~~~~~~~~~l~~~~~~i~rL~NDi~S~~~E~~~g~~--------~n~V~~ym~e~g~s~ee 247 (320)
.++++++++++|..+|+++... ..++.++++.+++|+|||.||+||++.|+. .|+|.++|+++|+|.++
T Consensus 168 ~~~~~l~e~~~g~~lp~~~~~~---~~~l~~~~~~~~~l~NDl~S~~KE~~~g~~~~~~~~~~~N~V~vl~~~~g~s~~e 244 (300)
T d1di1a_ 168 ALLSALMRFSMGLRLSADELQD---MKALEANCAKQLSVVNDIYSYDKEEEASRTGHKEGAFLCSAVKVLAEESKLGIPA 244 (300)
T ss_dssp HHHHHHHHHHHTCCCCHHHHHT---THHHHHHHHHHHHHHHHHHHTTTTCCC----------CCCHHHHHHHHHTCCHHH
T ss_pred HHHHHHHHHHcCCCCCHHHHHH---HHHHHHHHHHHHHHHhhHHHHHHHHHhcccccccccccccHHHHHHHhcCCCHHH
Confidence 9999999999999999987654 689999999999999999999999998874 59999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcC
Q 043754 248 AVKVFREKVGNAWKDINEELMR 269 (320)
Q Consensus 248 A~~~i~~~i~~~~k~l~~~~~~ 269 (320)
|++++.+++++.++++.+.+-+
T Consensus 245 A~~~~~~~~~~~~~~~~~~~~~ 266 (300)
T d1di1a_ 245 TKRVLWSMTREWETVHDEIVAE 266 (300)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999887653
No 5
>d1kiya_ a.128.1.5 (A:) Trichodiene synthase {Fusarium sporotrichioides [TaxId: 5514]}
Probab=99.59 E-value=2.1e-14 Score=130.65 Aligned_cols=192 Identities=12% Similarity=0.032 Sum_probs=143.9
Q ss_pred CCchhHH-HHHHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHhcchhhcccCchhHHHHHHHHHHHHHHHHHHHHhcCCc
Q 043754 52 PKFLLAR-KILTKVISMASIIDDIYDAYGTIEELELFATAIERWDLSAIDLLPEYIKLCYCALLDAYSEFEKDLASKGIL 130 (320)
Q Consensus 52 P~~s~~R-l~~ak~~~l~~~iDD~~D~~~t~~el~~~~~ai~rwd~~~~~~lp~~~~~~~~~l~~~~~e~~~~~~~~~~~ 130 (320)
|..+.+- ..++.+..+++.+||..|.. .+++..|...+-. +. . ++ .++-.++.+.+.. +...-|+
T Consensus 79 p~~~~e~~~~Ial~t~~~~~lDD~~~~~--~~~l~~f~~~l~~--G~-~---q~--~p~l~~f~~~L~~----~~~~~g~ 144 (354)
T d1kiya_ 79 AKVSKECMADLSIHYTYTLVLEDSKDDP--YPTMVNYFDDLQA--GR-E---QA--HPWWALVNEHFPN----VLRHFGP 144 (354)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHTTCCSCS--HHHHTTHHHHHHH--TC-C---CS--SHHHHHHHHHHHH----HHTTSCH
T ss_pred CCCCHHHHHHHHHHHHHHHHhccccccc--hHHHHHHHHHHHc--CC-C---Cc--cHHHHHHHHHHHH----HHHHcch
Confidence 6666554 58899999999999999865 3677777766553 11 1 11 1222333333333 3333355
Q ss_pred ccHhhHHHHHHHHHHHHHHHHHHhhCCCCCChHHHHhhhhhhhhhhHHHHHHHhcCCCCCCHHHHhhccCchH---HHHH
Q 043754 131 YGLPFAKESMKILVRSYIIEARWCDQQYVPTMEEYMRVALLSCGYLLLSTSSFLGMEDIVTKEAFEWVSGNPK---IVQA 207 (320)
Q Consensus 131 ~~~~~l~~~w~~~~~~~~~Ea~w~~~~~~Pt~eEYl~~~~~s~g~~~~~~~~~~~~g~~l~~e~~~~~~~~~~---l~~~ 207 (320)
.+...+.+++-+++.+.+.|.+ ..|..|+.++|...++..+|+....++..+-.+. .|+. +.++. .+..
T Consensus 145 ~~~~~i~~s~l~fv~a~~~E~~--~~~~~p~s~~y~~yrR~~sG~~e~ya~f~fp~~~-fpe~-----~~~~~~~~ai~~ 216 (354)
T d1kiya_ 145 FCSLNLIRSTLDFFEGCWIEQY--NFGGFPGSHDYPQFLRRMNGLGHCVGASLWPKEQ-FNER-----SLFLEITSAIAQ 216 (354)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT--CCCCCTTCTTHHHHHHHHHHCHHHHHHTTCCTTT-CCTT-----TSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh--ccCCCCChhhhHHHHHhccCcHHHHHHHHcchhc-CChH-----HHHHHHHHHHHH
Confidence 6788999999999999999987 4577899999999999999999999987775553 3332 22333 4666
Q ss_pred HHhHHHHhcCccchHHhh-hcCCcchhHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHH
Q 043754 208 SSIICRLMDDIVSHKFEQ-QRGHVASAVECYMKQHGVSEEEAVKVFREKVGNAWKDINE 265 (320)
Q Consensus 208 ~~~i~rL~NDi~S~~~E~-~~g~~~n~V~~ym~e~g~s~eeA~~~i~~~i~~~~k~l~~ 265 (320)
...++.|.|||.||.||. ..|+.+|.|..+|+++|+|.++|.+.+.+.+....+++..
T Consensus 217 ~~~~i~~~NDi~SfyKE~~~~ge~~N~V~vla~~~g~s~~eAl~~l~~~~~~~~~~~r~ 275 (354)
T d1kiya_ 217 MENWMVWVNDLMSFYKEFDDERDQISLVKNYVVSDEISLHEALEKLTQDTLHSSKQMVA 275 (354)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTCCCCHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhhhcchhhhcCCCcccHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 678899999999999995 6799999999999999999999999888888777776654
No 6
>d1ezfa_ a.128.1.2 (A:) Squalene synthase {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.62 E-value=12 Score=31.69 Aligned_cols=222 Identities=9% Similarity=-0.016 Sum_probs=100.6
Q ss_pred hHHHHhccccCCCchhHHHHHHHHHHHHHHHHhhhhcc-CCHHHHHHHHHHHHh-cchh---hcccCchhHHHHHHHHHH
Q 043754 41 GYFWILGVYFEPKFLLARKILTKVISMASIIDDIYDAY-GTIEELELFATAIER-WDLS---AIDLLPEYIKLCYCALLD 115 (320)
Q Consensus 41 ~y~~~~a~~feP~~s~~Rl~~ak~~~l~~~iDD~~D~~-~t~~el~~~~~ai~r-wd~~---~~~~lp~~~~~~~~~l~~ 115 (320)
+|+++.-..+ ...|-..+-+=.+.=++||+-|+. ++.++...+.+.+.. +... .....| ..+.+...+..
T Consensus 16 SF~~a~~~Lp----~~~R~~v~~lYafcR~~DdI~D~~~~~~~~k~~~L~~~~~~l~~~~~~~~~~~~-~~~~ll~~~~~ 90 (333)
T d1ezfa_ 16 SFAAVIQALD----GEMRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRFMESKE-KDRQVLEDFPT 90 (333)
T ss_dssp SHHHHHHTSC----THHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHTTCTTCCCCCCCS-TTHHHHHTHHH
T ss_pred cHHHHHHHCC----HHHHHHHHHHHHHHHHhhhhHhCCCCCHHHHHHHHHHHHHHHHHhhhcccccCc-chHHHHhhccH
Confidence 5666655433 335555556666777899999975 466665444444332 2111 111111 12344444444
Q ss_pred HHHHHHHHHHhcCCcccHhhHHHHHHHHHHHHHHHHHHhhCCCCCChHHHHhhhhhhhhhhHHHHHHHhcCCCCCCHHHH
Q 043754 116 AYSEFEKDLASKGILYGLPFAKESMKILVRSYIIEARWCDQQYVPTMEEYMRVALLSCGYLLLSTSSFLGMEDIVTKEAF 195 (320)
Q Consensus 116 ~~~e~~~~~~~~~~~~~~~~l~~~w~~~~~~~~~Ea~w~~~~~~Pt~eEYl~~~~~s~g~~~~~~~~~~~~g~~l~~e~~ 195 (320)
++.++..-. .........+.+.+.+.+ .+.....++|++|+..+...+.|+--.+.+-.++....-++..-
T Consensus 91 v~~~~~~l~------~~~~~~i~~~~~~m~~gm---~d~~~~~~~t~~dL~~Ycy~VAG~VG~~l~~l~~~~~~~~~~~~ 161 (333)
T d1ezfa_ 91 ISLEFRNLA------EKYQTVIADICRRMGIGM---AEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVG 161 (333)
T ss_dssp HHHHHHTSC------HHHHHHHHHHHHHHHHHH---HHHHTSCCCSHHHHHHHHHHHTHHHHHHHHHHHHHHTSSCHHHH
T ss_pred HHHHHHHHH------HHhccchHHHHHHHhccH---HHHccCcCCCHHHHHHHHHHHHHHHHHHHHHHhCcCCCccccHH
Confidence 443332100 001222233333333222 12234568898888777776666554444444443222222111
Q ss_pred hhccCchHHHHHHHhHHHHhcCccchHHhhhcCCcchhHHHHHhhCCCCH---------HHHHHHHHHHHHHHHHHHHHh
Q 043754 196 EWVSGNPKIVQASSIICRLMDDIVSHKFEQQRGHVASAVECYMKQHGVSE---------EEAVKVFREKVGNAWKDINEE 266 (320)
Q Consensus 196 ~~~~~~~~l~~~~~~i~rL~NDi~S~~~E~~~g~~~n~V~~ym~e~g~s~---------eeA~~~i~~~i~~~~k~l~~~ 266 (320)
+ ..+.....+...-+.|=+.....+.++|.+ -.=.-.+.++|++. +.+..-+..++..+.+-+...
T Consensus 162 ~----~~~~A~~lG~AlQltNIlRDi~eD~~~gR~-YlP~e~l~~~g~~~~dl~~~~~~~~~~~~~~~l~~~A~~~~~~a 236 (333)
T d1ezfa_ 162 E----DTERANSMGLFLQKTNIIRDYLEDQQGGRE-FWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALHHIPDV 236 (333)
T ss_dssp H----CHHHHHHHHHHHHHHHHHHTHHHHHHHTCC-CSCHHHHTTTCSSGGGGGSGGGHHHHHHHHHHHHHHHHTTHHHH
T ss_pred H----HHHHHHHHHHHHHHHHHHHhhHHHHhCCcE-ECCHHHHHHcCCCHHHHHhccchHHHHHHHHHHHHHHHHHHHHH
Confidence 1 122223333333344434444555556654 11112345677765 334444566666665444332
Q ss_pred hcCCCCCCHHHHHHH
Q 043754 267 LMRPPVVPMPLLERV 281 (320)
Q Consensus 267 ~~~~~~~p~~~~~~~ 281 (320)
.---..+|.+....|
T Consensus 237 ~~y~~~lp~~~~~~~ 251 (333)
T d1ezfa_ 237 ITYLSRLRNQSVFNF 251 (333)
T ss_dssp HHHHHTCCCHHHHHH
T ss_pred HHHHHHCCchhHHHH
Confidence 211235776554444
No 7
>d1fpsa_ a.128.1.1 (A:) Farnesyl diphosphate synthase (geranyltranstransferase) {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=76.72 E-value=20 Score=30.19 Aligned_cols=87 Identities=11% Similarity=0.043 Sum_probs=56.6
Q ss_pred cHhhHHHHHHHHHHHHHHHHHHhhCCCC----CChHHHHhhhhhhhhhhHH---HHHHHhcCCCCCCHHHHhhccCchHH
Q 043754 132 GLPFAKESMKILVRSYIIEARWCDQQYV----PTMEEYMRVALLSCGYLLL---STSSFLGMEDIVTKEAFEWVSGNPKI 204 (320)
Q Consensus 132 ~~~~l~~~w~~~~~~~~~Ea~w~~~~~~----Pt~eEYl~~~~~s~g~~~~---~~~~~~~~g~~l~~e~~~~~~~~~~l 204 (320)
+...+.++....+.|-..+..|...+.+ +|.++|++.-..-+|.... .+......|. .+++..+. ..++
T Consensus 151 ~~~~~~~~~~~~~~GQ~ldl~~~~~~~~~~~~~t~~~Y~~~i~~KTa~l~~~~~~~~~~~~~~~-~~~~~~~~---l~~~ 226 (348)
T d1fpsa_ 151 LLELFLQTAYQTELGQMLDLITAPVSKVDLSHFSEERYKAIVKYKTAFYSFYLPVAAAMYMVGI-DSKEEHEN---AKAI 226 (348)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCTTTCCSSSCCHHHHHHHHHHHTHHHHTHHHHHHHHHHTTC-CCHHHHHH---HHHH
T ss_pred HHHhhhhhhhHHHHHHHHHHhhhccccccccccCHHHHHHHHHHHhhhhhHHHHHHHHHHhhhh-ccccchhh---cccc
Confidence 4667788888888898888888765543 5899999987666664421 1112222232 34554443 3566
Q ss_pred HHHHHhHHHHhcCccchH
Q 043754 205 VQASSIICRLMDDIVSHK 222 (320)
Q Consensus 205 ~~~~~~i~rL~NDi~S~~ 222 (320)
-...+...-+.||+..+-
T Consensus 227 g~~lGiaFQI~DDilD~~ 244 (348)
T d1fpsa_ 227 LLEMGEYFQIQDDYLDCF 244 (348)
T ss_dssp HHHHHHHHHHHHHHHHHS
T ss_pred ccccchHHHHHHHHhhhh
Confidence 777788888888887753
No 8
>d2q80a1 a.128.1.1 (A:6-296) Geranylgeranyl pyrophosphate synthetase {Human (Homo sapiens) [TaxId: 9606]}
Probab=76.42 E-value=18 Score=29.61 Aligned_cols=87 Identities=15% Similarity=0.185 Sum_probs=58.8
Q ss_pred CcccHhhHHHHHHHHHHHHHHHHHHhhCCCCCChHHHHhhhhhhhhhhHHHHHHHhcCCCCCCHHHHhhccCchHHHHHH
Q 043754 129 ILYGLPFAKESMKILVRSYIIEARWCDQQYVPTMEEYMRVALLSCGYLLLSTSSFLGMEDIVTKEAFEWVSGNPKIVQAS 208 (320)
Q Consensus 129 ~~~~~~~l~~~w~~~~~~~~~Ea~w~~~~~~Pt~eEYl~~~~~s~g~~~~~~~~~~~~g~~l~~e~~~~~~~~~~l~~~~ 208 (320)
.......+.+...+.+.+-..+..|......||.++|+..-..-+|....++...-+.--...+ ...++-+..
T Consensus 103 ~~~~~~~~~~~~~~~~~gq~~d~~~~~~~~~~s~~~y~~ii~~KT~~Lf~~~~~~ga~~~~~~~-------~l~~~g~~l 175 (291)
T d2q80a1 103 HPDAVKLFTRQLLELHQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKE-------DLKPLLNTL 175 (291)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCS-------CCHHHHHHH
T ss_pred hhHHHHHHHHHHHHhHhccccccccccccccCCHHHHHHHHHhccchhhHhhhhhhhhhcccch-------hhHHHHHHH
Confidence 3455777888889999999999999888889999999998777777654433222111111111 235566667
Q ss_pred HhHHHHhcCccchH
Q 043754 209 SIICRLMDDIVSHK 222 (320)
Q Consensus 209 ~~i~rL~NDi~S~~ 222 (320)
++..-+.||+..+.
T Consensus 176 G~afQi~DD~ld~~ 189 (291)
T d2q80a1 176 GLFFQIRDDYANLH 189 (291)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhc
Confidence 77777888876664
No 9
>d1rqja_ a.128.1.1 (A:) Farnesyl diphosphate synthase (geranyltranstransferase) {Escherichia coli [TaxId: 562]}
Probab=63.08 E-value=25 Score=28.79 Aligned_cols=112 Identities=13% Similarity=0.100 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHhhCCCCCChHHHHhhhhhhhhhhHHHHHHHhc-CCCCCCHHHHhhccCchHHHHHHHhHHHHhcCccch
Q 043754 143 LVRSYIIEARWCDQQYVPTMEEYMRVALLSCGYLLLSTSSFLG-MEDIVTKEAFEWVSGNPKIVQASSIICRLMDDIVSH 221 (320)
Q Consensus 143 ~~~~~~~Ea~w~~~~~~Pt~eEYl~~~~~s~g~~~~~~~~~~~-~g~~l~~e~~~~~~~~~~l~~~~~~i~rL~NDi~S~ 221 (320)
.+.|-..+..| .+..++.++|.......+|..+..+....+ .....+++..+. ..++-...++..-+.||+..+
T Consensus 154 l~~GQ~ldl~~--~~~~~~~~~~~~i~~~KT~~l~~~~~~~~a~~~~~~~~~~~~~---l~~~g~~lGiaFQi~DD~lD~ 228 (299)
T d1rqja_ 154 MCGGQALDLDA--EGKHVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRRALPV---LDKYAESIGLAFQVQDDILDV 228 (299)
T ss_dssp HHHHHHHHHHT--TTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh--ccCcccHHHHHHHHHHHHhhHHHHHHHhhhhhhcchhhHHHHH---HHHHHHHHHHHHHHHHHHHhh
Confidence 34455545444 356789999999988888876654443322 111223443333 356778888899999999877
Q ss_pred HH-hhhcCCc---------chhHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHH
Q 043754 222 KF-EQQRGHV---------ASAVECYMKQHGVSEEEAVKVFREKVGNAWKDINE 265 (320)
Q Consensus 222 ~~-E~~~g~~---------~n~V~~ym~e~g~s~eeA~~~i~~~i~~~~k~l~~ 265 (320)
.- +...|.. .|.+.++. .++|.+..+++++++.+.+..
T Consensus 229 ~~~~~~~GK~~g~Dl~egK~Tlp~i~~------le~a~~~~~~~~~~~~~~l~~ 276 (299)
T d1rqja_ 229 VGDTATLGKRQGADQQLGKSTYPALLG------LEQARKKARDLIDDARQSLKQ 276 (299)
T ss_dssp HSCHHHHSSCTTHHHHHTCCCHHHHHC------HHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhcCCchhhHHHCCChhHHHHHH------HHHHHHHHHHHHHHHHHHHHh
Confidence 53 2222321 24444443 566777788888888777654
No 10
>d2d9ia1 d.68.8.1 (A:8-90) Nedd4-binding protein 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=48.75 E-value=9.6 Score=25.07 Aligned_cols=25 Identities=16% Similarity=0.352 Sum_probs=21.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHH
Q 043754 241 HGVSEEEAVKVFREKVGNAWKDINE 265 (320)
Q Consensus 241 ~g~s~eeA~~~i~~~i~~~~k~l~~ 265 (320)
||.+.+||++.+...+..+++.+..
T Consensus 7 HG~~~~eA~~~l~~~l~~~~~~~~~ 31 (83)
T d2d9ia1 7 HGLHVDEALEHLMRVLEKKTEEFKQ 31 (83)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHhhhh
Confidence 7999999999999999998876544
No 11
>d1rtra_ a.128.1.1 (A:) Farnesyl diphosphate synthase (geranyltranstransferase) {Staphylococcus aureus [TaxId: 1280]}
Probab=38.08 E-value=50 Score=26.70 Aligned_cols=98 Identities=12% Similarity=0.020 Sum_probs=55.1
Q ss_pred CCCCChHHHHhhhhhhhhhhHHHHHHHhcCCCCCCHHHHhhccCchHHHHHHHhHHHHhcCccchHHh-----------h
Q 043754 157 QYVPTMEEYMRVALLSCGYLLLSTSSFLGMEDIVTKEAFEWVSGNPKIVQASSIICRLMDDIVSHKFE-----------Q 225 (320)
Q Consensus 157 ~~~Pt~eEYl~~~~~s~g~~~~~~~~~~~~g~~l~~e~~~~~~~~~~l~~~~~~i~rL~NDi~S~~~E-----------~ 225 (320)
+...+.++|.......+|.....+....+.--..+++..+. ..++-...+...-+.||+..+.-. .
T Consensus 161 ~~~~~~~~~~~i~~~KT~~l~~~~~~~~a~~~~~~~~~~~~---l~~~g~~lG~aFQi~DD~lD~~g~~~~~GK~~g~Di 237 (290)
T d1rtra_ 161 GQPIDLETLEMIHKTKTGALLTFAVMSAADIANVDDTTKEH---LESYSYHLGMMFQIKDDLLDCYGDEAKLGKKVGSDL 237 (290)
T ss_dssp TSCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTCCHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHCC---------
T ss_pred ccCCCHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHH---HHHHHHHHHHHHHHHHHHHHHhcchHhhccCcccHh
Confidence 34458999999887777765544332222111234444443 356677788888899998876421 2
Q ss_pred hcCCcchhHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 043754 226 QRGHVASAVECYMKQHGVSEEEAVKVFREKVGNAWKDIN 264 (320)
Q Consensus 226 ~~g~~~n~V~~ym~e~g~s~eeA~~~i~~~i~~~~k~l~ 264 (320)
..|.. +.+.+|.. ++|.+......+...+++.
T Consensus 238 ~~gK~-T~p~i~a~------~~a~~~~~~~~~~~~~~l~ 269 (290)
T d1rtra_ 238 ENNKS-TYVSLLGK------DGAEDKLTYHRDAAVDELT 269 (290)
T ss_dssp ----C-CHHHHHHH------HHHHHHHHHHHHHHHHHHH
T ss_pred hcCCc-cHHHHHHH------HHHHHHHHHHHHHHHHHHH
Confidence 22333 55555543 4566666666665555544
No 12
>d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=35.25 E-value=18 Score=19.28 Aligned_cols=24 Identities=17% Similarity=0.317 Sum_probs=17.7
Q ss_pred hhhhhcccCCCCCCchhHHHHHHH
Q 043754 287 LMDVLYQNNDSYTNPHLMKDHVAA 310 (320)
Q Consensus 287 ~~~~~Y~~~D~~~~~~~~~~~i~~ 310 (320)
.+.+|=+.+|||-+.+++.+.+.+
T Consensus 9 ~FRifDkNaDGyiD~eEl~~ilr~ 32 (34)
T d1ctda_ 9 AFRIFDKNADGYIDIEELGEILRA 32 (34)
T ss_dssp HHHTTCCSSSSCBCHHHHHHHHHH
T ss_pred HHHHHccCCcccccHHHHHHHHHh
Confidence 344456889999888888887764
No 13
>d1d0qa_ g.41.3.2 (A:) Zinc-binding domain of DNA primase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=32.02 E-value=17 Score=24.80 Aligned_cols=28 Identities=29% Similarity=0.299 Sum_probs=23.3
Q ss_pred CCcchhHHHHHhhCCCCHHHHHHHHHHH
Q 043754 228 GHVASAVECYMKQHGVSEEEAVKVFREK 255 (320)
Q Consensus 228 g~~~n~V~~ym~e~g~s~eeA~~~i~~~ 255 (320)
|.-.|+|..+|+-.|+|--||++.+.++
T Consensus 64 g~~Gd~i~fv~~~~~~sf~eAv~~La~~ 91 (102)
T d1d0qa_ 64 GAGGNAFTFLMDIEGIPFVEAAKRLAAK 91 (102)
T ss_dssp CCEECHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHCcCHHHHHHHHHHH
Confidence 4456899999998999999999887654
No 14
>d1wy6a1 a.118.20.1 (A:7-167) Hypothetical protein ST1625 {Archaeon Sulfolobus tokodaii [TaxId: 111955]}
Probab=28.59 E-value=76 Score=22.91 Aligned_cols=74 Identities=19% Similarity=0.283 Sum_probs=46.7
Q ss_pred hHHHHhcCccchHHhhhcCCcchhHHHHHhhCCCCH--HHHHHHHHH-HHHHHHHHHHHhhcCCCCCCHHHHHHHHH
Q 043754 210 IICRLMDDIVSHKFEQQRGHVASAVECYMKQHGVSE--EEAVKVFRE-KVGNAWKDINEELMRPPVVPMPLLERVLN 283 (320)
Q Consensus 210 ~i~rL~NDi~S~~~E~~~g~~~n~V~~ym~e~g~s~--eeA~~~i~~-~i~~~~k~l~~~~~~~~~~p~~~~~~~~n 283 (320)
.+.--+|+|+++=.=..-+..-..|.|||.-+-.|+ +-|.+.+.. -=++...++-++.++...+|++++--+-|
T Consensus 52 ~v~~~Ld~IG~~FDls~C~Nlk~vv~C~~~~n~~se~vdlALd~lv~~~kkd~Ld~i~~~l~kn~~i~~~~llkia~ 128 (161)
T d1wy6a1 52 YMFQVLDKIGSYFDLDKCQNLKSVVECGVINNTLNEHVNKALDILVIQGKRDKLEEIGREILKNNEVSASILVAIAN 128 (161)
T ss_dssp HHHHHHHHHGGGSCGGGCSCTHHHHHHHHHTTCCCHHHHHHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHH
T ss_pred HHHHHHHHHhhhcCchhhhcHHHHHHHHHHhcchHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 345566778877666667777889999999887775 556665322 12344445555567766788887544433
No 15
>d1rxda_ c.45.1.1 (A:) Protein tyrosine phosphatase type IVa {Human (Homo sapiens), pr-1 [TaxId: 9606]}
Probab=26.58 E-value=18 Score=26.24 Aligned_cols=26 Identities=27% Similarity=0.400 Sum_probs=21.1
Q ss_pred CCcchhHHHHHhhCCCCHHHHHHHHH
Q 043754 228 GHVASAVECYMKQHGVSEEEAVKVFR 253 (320)
Q Consensus 228 g~~~n~V~~ym~e~g~s~eeA~~~i~ 253 (320)
|-.+..+.+|+...|+|.++|++.++
T Consensus 101 gRsg~~~a~~l~~~~~~~~~av~~vr 126 (152)
T d1rxda_ 101 GRAPVLVALALIEGGMKYEDAVQFIR 126 (152)
T ss_dssp TTHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHhCcCHHHHHHHHH
Confidence 44557788999999999999988654
No 16
>d1v4ea_ a.128.1.1 (A:) Octoprenyl-diphosphate synthase {Thermotoga maritima [TaxId: 2336]}
Probab=22.94 E-value=1.7e+02 Score=23.10 Aligned_cols=82 Identities=17% Similarity=0.110 Sum_probs=50.3
Q ss_pred cHhhHHHHHHHHHHHHHHHHHHhhCCCCCChHHHHhhhhhhhhhhHHHHHHHhcC-CCCCCHHHHhhccCchHHHHHHHh
Q 043754 132 GLPFAKESMKILVRSYIIEARWCDQQYVPTMEEYMRVALLSCGYLLLSTSSFLGM-EDIVTKEAFEWVSGNPKIVQASSI 210 (320)
Q Consensus 132 ~~~~l~~~w~~~~~~~~~Ea~w~~~~~~Pt~eEYl~~~~~s~g~~~~~~~~~~~~-g~~l~~e~~~~~~~~~~l~~~~~~ 210 (320)
....+.+.......+-+.+..+. +..+|.++|++.-..-+|....++...-++ +....++ ..++-...+.
T Consensus 120 ~~~~l~~~~~~~~~Gq~~d~~~~--~~~~t~~~y~~~i~~KT~~lf~~~~~~ga~l~g~~~~~-------l~~~g~~lG~ 190 (280)
T d1v4ea_ 120 LRRAFLNVIGKMSEAELIEQLSR--YKPITKEEYLRIVEGKSGALFGLALQLPALLEGELGED-------LYNLGVTIGT 190 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT--TSCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTCCCHH-------HHHHHHHHHH
T ss_pred ccccchhhcccchhHHHHHHHhc--cCCCCHHHHHHHHHhccccHHHHHHHHHHHHccccHHH-------HHHHHHHHHH
Confidence 35556677777777776665443 445799999999888777666544322111 1222332 2345566677
Q ss_pred HHHHhcCccchH
Q 043754 211 ICRLMDDIVSHK 222 (320)
Q Consensus 211 i~rL~NDi~S~~ 222 (320)
..-+.||+..+.
T Consensus 191 afQi~DD~ld~~ 202 (280)
T d1v4ea_ 191 IYQMFDDIMDFA 202 (280)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHhhcccc
Confidence 777788887654
Done!