Query 043760
Match_columns 345
No_of_seqs 333 out of 4230
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 13:47:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043760.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043760hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 3.3E-36 1.1E-40 246.1 19.0 158 30-218 6-163 (169)
2 1oy3_D Transcription factor in 100.0 3.9E-36 1.3E-40 265.4 20.4 200 2-231 19-265 (282)
3 4g8k_A 2-5A-dependent ribonucl 100.0 6.5E-35 2.2E-39 264.9 23.6 208 2-219 35-301 (337)
4 3aji_A 26S proteasome non-ATPa 100.0 8.3E-35 2.8E-39 249.7 22.8 188 2-222 16-203 (231)
5 2dzn_A Probable 26S proteasome 100.0 2.7E-34 9.2E-39 245.9 24.0 195 2-227 12-211 (228)
6 2f8y_A Notch homolog 1, transl 100.0 1.7E-34 5.7E-39 246.5 22.6 205 3-219 2-219 (223)
7 1wdy_A 2-5A-dependent ribonucl 100.0 2.8E-34 9.7E-39 253.4 24.8 205 2-218 15-247 (285)
8 1yyh_A HN1;, notch 1, ankyrin 100.0 4.2E-35 1.4E-39 255.5 18.5 187 3-221 34-220 (253)
9 3utm_A Tankyrase-1; tankyrase, 100.0 3.1E-34 1.1E-38 260.8 24.6 213 2-226 34-315 (351)
10 2xai_A ASB-9, ankyrin repeat a 100.0 2.8E-34 9.6E-39 251.5 22.4 193 2-230 13-205 (261)
11 2f8y_A Notch homolog 1, transl 100.0 6E-35 2E-39 249.3 17.2 173 38-219 1-186 (223)
12 2rfa_A Transient receptor pote 100.0 2E-34 6.8E-39 247.6 20.2 185 2-219 13-225 (232)
13 3b7b_A Euchromatic histone-lys 100.0 8.3E-34 2.8E-38 244.4 23.7 193 2-227 21-213 (237)
14 3hra_A Ankyrin repeat family p 100.0 4E-34 1.4E-38 240.2 21.0 179 2-214 15-201 (201)
15 1k1a_A B-cell lymphoma 3-encod 100.0 1.1E-33 3.6E-38 244.1 23.3 186 2-221 19-213 (241)
16 4b93_B Ankyrin repeat domain-c 100.0 1.8E-34 6.2E-39 253.8 18.2 199 2-231 21-225 (269)
17 3aji_A 26S proteasome non-ATPa 100.0 3.8E-34 1.3E-38 245.6 19.8 181 2-216 50-230 (231)
18 3d9h_A CDNA FLJ77766, highly s 100.0 1.7E-33 5.7E-38 249.8 22.4 190 25-227 56-258 (285)
19 1ikn_D Protein (I-kappa-B-alph 100.0 9.7E-35 3.3E-39 250.4 13.8 188 2-219 18-212 (236)
20 4gpm_A Engineered protein OR26 100.0 1.3E-33 4.3E-38 230.8 18.9 151 2-182 14-164 (169)
21 1yyh_A HN1;, notch 1, ankyrin 100.0 1.4E-33 5E-38 245.8 20.4 180 2-214 67-246 (253)
22 3eu9_A Huntingtin-interacting 100.0 7.5E-33 2.6E-37 238.2 24.2 204 2-218 19-237 (240)
23 4b93_B Ankyrin repeat domain-c 100.0 1.9E-34 6.5E-39 253.7 13.2 177 6-216 67-244 (269)
24 1s70_B 130 kDa myosin-binding 100.0 9.9E-34 3.4E-38 252.5 18.0 217 2-230 50-271 (299)
25 2etb_A Transient receptor pote 100.0 5.3E-34 1.8E-38 248.8 13.5 188 2-219 12-249 (256)
26 2rfm_A Putative ankyrin repeat 100.0 2.7E-33 9.2E-38 233.7 17.1 160 24-214 31-190 (192)
27 3ljn_A Hypothetical protein; a 100.0 3.7E-33 1.3E-37 256.0 19.6 204 2-218 30-271 (364)
28 1n11_A Ankyrin; clathrin, BAND 100.0 2E-32 6.7E-37 257.1 24.6 203 3-219 157-372 (437)
29 3v30_A DNA-binding protein rfx 100.0 5.5E-33 1.9E-37 227.6 17.6 162 28-219 2-163 (172)
30 3v31_A Ankyrin repeat family A 100.0 6E-33 2E-37 226.3 17.3 162 27-219 2-163 (167)
31 1ihb_A P18-INK4C(INK6), cyclin 100.0 6.9E-33 2.4E-37 224.6 16.7 158 27-216 4-162 (162)
32 1k1a_A B-cell lymphoma 3-encod 100.0 3.7E-33 1.3E-37 240.7 15.7 180 2-215 56-240 (241)
33 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.2E-32 4.2E-37 225.1 17.8 159 25-214 11-169 (169)
34 2fo1_E LIN-12 protein; beta-ba 100.0 7.9E-33 2.7E-37 254.8 18.1 194 10-216 151-371 (373)
35 3jxi_A Vanilloid receptor-rela 100.0 1.7E-33 5.8E-38 246.1 12.8 188 2-219 15-253 (260)
36 2pnn_A Transient receptor pote 100.0 2.1E-33 7.1E-38 247.5 13.2 185 2-216 23-258 (273)
37 3kea_A K1L; tropism, ANK repea 100.0 2.2E-33 7.5E-38 249.1 13.1 199 3-219 10-223 (285)
38 3d9h_A CDNA FLJ77766, highly s 100.0 4.2E-32 1.4E-36 240.8 20.9 153 56-219 53-218 (285)
39 3b7b_A Euchromatic histone-lys 100.0 7.7E-32 2.6E-36 232.1 21.8 177 2-211 54-230 (237)
40 2dzn_A Probable 26S proteasome 100.0 3.7E-32 1.3E-36 232.6 19.1 175 2-212 46-226 (228)
41 1n11_A Ankyrin; clathrin, BAND 100.0 1.4E-31 4.9E-36 251.3 24.7 205 2-220 24-241 (437)
42 1oy3_D Transcription factor in 100.0 3.4E-32 1.2E-36 240.1 18.7 192 24-221 5-222 (282)
43 4hbd_A KN motif and ankyrin re 100.0 1.3E-32 4.5E-37 242.9 15.0 183 3-215 87-274 (276)
44 3twr_A Tankyrase-2; ankyrin re 100.0 1.6E-32 5.6E-37 223.3 14.3 160 25-215 5-164 (165)
45 3f6q_A Integrin-linked protein 100.0 4E-32 1.4E-36 224.1 16.1 164 26-219 3-166 (179)
46 2rfa_A Transient receptor pote 100.0 2E-31 6.7E-36 228.9 20.1 174 27-217 2-184 (232)
47 2xai_A ASB-9, ankyrin repeat a 100.0 2.3E-31 8E-36 232.9 19.5 161 27-219 2-162 (261)
48 1ikn_D Protein (I-kappa-B-alph 100.0 2.9E-32 1E-36 234.8 12.9 180 24-227 4-187 (236)
49 1awc_B Protein (GA binding pro 100.0 1.9E-31 6.5E-36 214.3 16.7 151 28-210 2-152 (153)
50 3kea_A K1L; tropism, ANK repea 100.0 1.6E-31 5.6E-36 237.0 16.6 164 40-219 12-189 (285)
51 3hra_A Ankyrin repeat family p 100.0 1.2E-30 4.3E-35 218.8 20.8 171 25-220 2-174 (201)
52 2fo1_E LIN-12 protein; beta-ba 100.0 3.6E-32 1.2E-36 250.3 11.5 188 26-220 123-342 (373)
53 1bd8_A P19INK4D CDK4/6 inhibit 100.0 7.5E-31 2.6E-35 211.3 16.1 154 28-213 2-155 (156)
54 3v30_A DNA-binding protein rfx 100.0 9.8E-31 3.3E-35 214.2 17.0 160 2-190 12-171 (172)
55 3utm_A Tankyrase-1; tankyrase, 100.0 5.7E-30 2E-34 232.6 23.0 199 2-218 68-336 (351)
56 3ljn_A Hypothetical protein; a 100.0 5E-31 1.7E-35 241.8 14.9 192 24-227 16-247 (364)
57 4g8k_A 2-5A-dependent ribonucl 100.0 1.4E-29 4.8E-34 229.7 21.1 182 2-219 135-329 (337)
58 2etb_A Transient receptor pote 100.0 1.1E-30 3.7E-35 227.8 13.0 163 27-217 1-207 (256)
59 1ycs_B 53BP2, P53BP2; ankyrin 100.0 1.9E-30 6.5E-35 224.2 12.3 163 25-219 2-167 (239)
60 1s70_B 130 kDa myosin-binding 100.0 6.8E-30 2.3E-34 227.6 15.9 166 2-196 83-274 (299)
61 1sw6_A Regulatory protein SWI6 100.0 3.4E-30 1.1E-34 233.0 13.6 194 5-219 110-311 (327)
62 1ihb_A P18-INK4C(INK6), cyclin 100.0 2.2E-29 7.4E-34 203.9 16.4 148 2-179 15-162 (162)
63 1wdy_A 2-5A-dependent ribonucl 100.0 8.8E-29 3E-33 218.1 21.6 189 27-221 4-216 (285)
64 3eu9_A Huntingtin-interacting 100.0 4E-29 1.4E-33 214.9 18.6 186 24-219 5-205 (240)
65 2y1l_E Darpin-8.4; hydrolase-i 100.0 7.9E-29 2.7E-33 202.4 18.8 145 2-175 24-168 (169)
66 2pnn_A Transient receptor pote 100.0 4E-30 1.4E-34 226.4 10.9 167 23-218 8-220 (273)
67 3f6q_A Integrin-linked protein 100.0 6.9E-29 2.4E-33 204.6 16.0 157 2-187 15-171 (179)
68 3v31_A Ankyrin repeat family A 100.0 1.3E-28 4.4E-33 200.5 17.4 148 2-179 13-160 (167)
69 2vge_A RELA-associated inhibit 100.0 3.6E-31 1.2E-35 227.2 2.0 176 8-217 1-179 (229)
70 1awc_B Protein (GA binding pro 100.0 2.2E-28 7.6E-33 196.3 18.0 141 2-172 12-152 (153)
71 1bi7_B P16INK4A, MTS1, multipl 100.0 2.2E-29 7.5E-34 203.0 12.0 142 25-194 9-151 (156)
72 3jxi_A Vanilloid receptor-rela 100.0 1.8E-29 6E-34 220.5 11.1 168 25-218 2-212 (260)
73 1d9s_A Cyclin-dependent kinase 100.0 1.2E-28 4E-33 194.0 11.6 124 25-175 9-133 (136)
74 3twr_A Tankyrase-2; ankyrin re 100.0 4.3E-28 1.5E-32 197.0 15.2 145 2-175 18-162 (165)
75 2rfm_A Putative ankyrin repeat 100.0 4.5E-28 1.6E-32 201.9 15.6 145 2-175 45-189 (192)
76 1d9s_A Cyclin-dependent kinase 100.0 2.3E-28 7.9E-33 192.3 12.6 133 52-216 3-136 (136)
77 1bd8_A P19INK4D CDK4/6 inhibit 100.0 1.2E-27 4.1E-32 192.5 16.9 143 2-175 12-155 (156)
78 3t8k_A Uncharacterized protein 100.0 1.1E-28 3.7E-33 204.7 8.9 158 28-216 6-179 (186)
79 1sw6_A Regulatory protein SWI6 100.0 2.1E-28 7.1E-33 221.2 10.4 158 2-196 141-325 (327)
80 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.8E-28 6E-33 211.8 8.3 164 2-196 15-190 (239)
81 4hbd_A KN motif and ankyrin re 99.9 5.3E-28 1.8E-32 213.4 10.7 163 28-220 76-246 (276)
82 2vge_A RELA-associated inhibit 99.9 2.8E-30 9.4E-35 221.7 -4.1 173 2-211 31-208 (229)
83 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.2E-26 4.1E-31 179.2 15.4 122 28-175 2-123 (126)
84 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2E-26 6.8E-31 178.0 15.8 126 61-216 1-126 (126)
85 2jab_A H10-2-G3; HER2, darpin, 99.9 1E-26 3.4E-31 182.9 14.0 125 25-175 11-135 (136)
86 2jab_A H10-2-G3; HER2, darpin, 99.9 1.2E-26 4.1E-31 182.4 14.2 127 58-214 10-136 (136)
87 3t8k_A Uncharacterized protein 99.9 1.9E-27 6.4E-32 197.3 7.8 152 2-184 16-184 (186)
88 1bi7_B P16INK4A, MTS1, multipl 99.9 7.7E-27 2.6E-31 188.0 10.1 133 56-219 6-139 (156)
89 3c5r_A BARD-1, BRCA1-associate 99.9 1.4E-26 4.8E-31 182.2 9.0 95 25-121 7-101 (137)
90 3ui2_A Signal recognition part 99.9 8.4E-26 2.9E-30 195.6 13.0 145 25-218 42-187 (244)
91 3deo_A Signal recognition part 99.9 1.1E-25 3.9E-30 186.1 12.8 140 25-213 41-181 (183)
92 3c5r_A BARD-1, BRCA1-associate 99.9 3.1E-26 1E-30 180.3 8.5 129 57-217 5-135 (137)
93 3ehr_A Osteoclast-stimulating 99.9 5.8E-26 2E-30 193.6 8.5 132 57-218 68-200 (222)
94 2aja_A Ankyrin repeat family p 99.9 3.4E-27 1.2E-31 216.2 0.3 158 25-219 89-253 (376)
95 2b0o_E UPLC1; arfgap, structur 99.9 4E-25 1.4E-29 197.1 13.3 136 28-196 151-295 (301)
96 3aaa_C Myotrophin, protein V-1 99.9 5.5E-25 1.9E-29 169.8 11.7 112 59-196 4-115 (123)
97 3aaa_C Myotrophin, protein V-1 99.9 3E-25 1E-29 171.3 9.9 114 25-164 4-117 (123)
98 3ehr_A Osteoclast-stimulating 99.9 3.8E-25 1.3E-29 188.5 9.6 137 25-188 70-207 (222)
99 2aja_A Ankyrin repeat family p 99.9 5.4E-27 1.8E-31 215.0 -2.7 203 2-217 102-345 (376)
100 3deo_A Signal recognition part 99.9 2.9E-26 1E-30 189.6 1.5 150 36-216 8-168 (183)
101 1dcq_A PYK2-associated protein 99.9 1.2E-22 4.2E-27 179.0 18.2 165 24-217 62-264 (278)
102 3lvq_E ARF-GAP with SH3 domain 99.9 3.7E-23 1.3E-27 197.1 15.8 129 28-183 132-269 (497)
103 3ui2_A Signal recognition part 99.9 4.1E-25 1.4E-29 191.3 1.7 140 27-197 14-154 (244)
104 3jue_A Arfgap with coiled-coil 99.9 3.3E-23 1.1E-27 189.2 12.7 143 28-196 199-346 (368)
105 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.6E-22 5.5E-27 147.9 11.7 93 27-121 1-93 (93)
106 1dcq_A PYK2-associated protein 99.9 5.3E-22 1.8E-26 174.9 15.3 124 29-178 131-262 (278)
107 1n0q_A 3ANK, 3 ankyrin repeats 99.9 5.1E-22 1.7E-26 145.2 12.1 89 62-175 2-90 (93)
108 2l6b_A NR1C; ankyrin, consensu 99.9 1.5E-22 5.3E-27 154.0 9.2 107 58-190 5-111 (115)
109 3jue_A Arfgap with coiled-coil 99.9 4.6E-22 1.6E-26 181.6 13.9 130 59-218 196-328 (368)
110 3lvq_E ARF-GAP with SH3 domain 99.9 5E-22 1.7E-26 189.3 14.7 128 62-219 132-268 (497)
111 2b0o_E UPLC1; arfgap, structur 99.9 4.7E-22 1.6E-26 177.3 13.3 126 62-217 151-285 (301)
112 2l6b_A NR1C; ankyrin, consensu 99.9 4.5E-22 1.5E-26 151.4 9.2 107 24-156 5-111 (115)
113 2zgd_A 3 repeat synthetic anky 99.8 2.2E-19 7.6E-24 135.4 9.6 91 23-115 19-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.8 5.1E-19 1.7E-23 133.4 11.2 94 54-172 16-109 (110)
115 1gp8_A Protein (scaffolding pr 27.4 44 0.0015 18.7 2.1 18 66-83 17-34 (40)
116 1znp_A Hypothetical protein AT 27.0 20 0.00067 27.5 1.0 43 285-336 101-146 (154)
117 3zrh_A Ubiquitin thioesterase 24.8 1.6E+02 0.0054 26.5 6.3 49 35-83 29-90 (454)
118 3zrh_A Ubiquitin thioesterase 22.9 2.4E+02 0.0083 25.3 7.1 50 68-117 28-90 (454)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=3.3e-36 Score=246.10 Aligned_cols=158 Identities=31% Similarity=0.416 Sum_probs=149.2
Q ss_pred cHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHHcCcH
Q 043760 30 TPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLHLAAMRGHI 109 (345)
Q Consensus 30 t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~ 109 (345)
++|+.||..|+.++|++|++.|+++ +.+|..|+||||+|+..++.+++++|+++|+++ +.+|..|+||||+|+..|+.
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadv-n~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~-~~~d~~g~TpLh~A~~~g~~ 83 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADV-NASDSDGRTPLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAENGHK 83 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHhcccch-hhhccCCCCHHHHHHHcCCH
Confidence 4799999999999999999999998 999999999999999999999999999999999 89999999999999999999
Q ss_pred HHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhcCCccccccCCCCCc
Q 043760 110 DVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTSTAIEVNAVTANGFT 189 (345)
Q Consensus 110 ~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~g~T 189 (345)
+++++|+++|++ +|.+|..|+||||+|+..|+.+++++|++. |++++.+|.+|+|
T Consensus 84 ~~v~~Ll~~gad------------------------vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~-gad~~~~d~~G~T 138 (169)
T 4gpm_A 84 EVVKLLISKGAD------------------------VNAKDSDGRTPLHHAAENGHKEVVKLLISK-GADVNTSDSDGRT 138 (169)
T ss_dssp HHHHHHHHTTCC------------------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCC
T ss_pred HHHHHHHHCcCC------------------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCCC
Confidence 999999999998 899999999999999999999999999999 9999999999999
Q ss_pred HHHHHHhcCCCCchhhHHHHHHHcccccc
Q 043760 190 AWDILAQSKRDIKDWDTGELLRRAGAISA 218 (345)
Q Consensus 190 ~L~~a~~~~~~~~~~~i~~~L~~~ga~~~ 218 (345)
|||+|+. .++.+++++|+++||+..
T Consensus 139 pL~~A~~----~g~~~iv~~Ll~~GA~ie 163 (169)
T 4gpm_A 139 PLDLARE----HGNEEVVKLLEKQGGWLE 163 (169)
T ss_dssp HHHHHHH----TTCHHHHHHHHTC-----
T ss_pred HHHHHHH----cCCHHHHHHHHHCCCCcC
Confidence 9999999 889999999999999874
No 2
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=3.9e-36 Score=265.44 Aligned_cols=200 Identities=23% Similarity=0.204 Sum_probs=164.5
Q ss_pred CCCHHHHHHHHhcCCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHH
Q 043760 2 AGSVNTLLELRQQDPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKAL 81 (345)
Q Consensus 2 ~g~~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~L 81 (345)
.|+.++|+.|++.++........+..|+||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++|
T Consensus 19 ~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~~~~~~~v~~L 97 (282)
T 1oy3_D 19 HQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGV-LVAERGGHTALHLACRVRAHTCACVL 97 (282)
T ss_dssp TTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTSCCHHHHHTTTTCHHHHHHH
T ss_pred cCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCcchhHhh
Confidence 57888999999887763322334788899999999999999999999988887 78888899999999999999999999
Q ss_pred HhhCCCC----------------------------------------------CcCCCCCCCcHHHHHHHcCcHHHHHHH
Q 043760 82 LQVIPDK----------------------------------------------CSDTDVDGRNPLHLAAMRGHIDVLEEL 115 (345)
Q Consensus 82 l~~~~~~----------------------------------------------~~~~d~~g~tpLh~A~~~g~~~iv~~L 115 (345)
++++++. .+..+..|.||||+|+..|+.+++++|
T Consensus 98 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 177 (282)
T 1oy3_D 98 LQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLL 177 (282)
T ss_dssp SSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred hccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHH
Confidence 8877651 255677889999999999999999999
Q ss_pred HhcCCCcccccccCCccHHHHHHhcCCcccccccCC-CCCCHHHHHHHcCCHHHHHHhhhcCCccccccCCCCCcHHHHH
Q 043760 116 VRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDD-YGMTILLLAVADKQIEAIKFLTTSTAIEVNAVTANGFTAWDIL 194 (345)
Q Consensus 116 l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~-~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a 194 (345)
++.|++ ++.++. .|+||||+|+..|+.+++++|++. |++++.+|..|+||||+|
T Consensus 178 l~~g~~------------------------~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~-gad~~~~d~~g~tpL~~A 232 (282)
T 1oy3_D 178 RDAGAD------------------------LNKPEPTCGRTPLHLAVEAQAASVLELLLKA-GADPTARMYGGRTPLGSA 232 (282)
T ss_dssp HHHTCC------------------------TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHH
T ss_pred HHcCCC------------------------CCCCCCCCCcCHHHHHHHcCCHHHHHHHHHc-CCCCcccccCCCCHHHHH
Confidence 988887 788875 499999999999999999999999 999999999999999999
Q ss_pred HhcCCCCchhhHHHHHHHcccccccccCCccchhhhc
Q 043760 195 AQSKRDIKDWDTGELLRRAGAISAKDLQLPVNELAVT 231 (345)
Q Consensus 195 ~~~~~~~~~~~i~~~L~~~ga~~~~~~~~~~~~~~~~ 231 (345)
+. .++.+++++|+++||++.........++...
T Consensus 233 ~~----~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a 265 (282)
T 1oy3_D 233 LL----RPNPILARLLRAHGAPEPEDGGDKLSPCSSS 265 (282)
T ss_dssp HT----SSCHHHHHHHHHTTCCCCCCC----------
T ss_pred HH----cCCcHHHHHHHHcCCCcCcCCCccccccccc
Confidence 99 8899999999999999876555555554433
No 3
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=6.5e-35 Score=264.86 Aligned_cols=208 Identities=25% Similarity=0.263 Sum_probs=178.1
Q ss_pred CCCHHHHHHHHhcCCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCc---------------------------
Q 043760 2 AGSVNTLLELRQQDPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRI--------------------------- 54 (345)
Q Consensus 2 ~g~~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~--------------------------- 54 (345)
+|++++|+.||++|+++.... +..|+||||+||..|+.++|++|+++|+++
T Consensus 35 ~g~~~~V~~LL~~Gadvn~~~--~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (337)
T 4g8k_A 35 NEDVDLVQQLLEGGANVNFQE--EEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFL 112 (337)
T ss_dssp TTCHHHHHHHHHHTCCTTCCC--TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCCccC--CCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhh
Confidence 699999999999999876542 456999999999999999999999988754
Q ss_pred -----ccccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCC---------cCCCCCCCcHHHHHHHcCcHHHHHHHHhc-C
Q 043760 55 -----AEELDSRKSSALHIASQKGYVGIVKALLQVIPDKC---------SDTDVDGRNPLHLAAMRGHIDVLEELVRA-K 119 (345)
Q Consensus 55 -----~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~---------~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~-~ 119 (345)
++.+|..|.||||+|+..|+.+++++|+++|+++. ...+..|.||||+|+..|+.+++++|++. |
T Consensus 113 ~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~g 192 (337)
T 4g8k_A 113 SKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMG 192 (337)
T ss_dssp TTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSC
T ss_pred hccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccC
Confidence 25577889999999999999999999999998872 12455799999999999999999999964 6
Q ss_pred CCcccccccCCcc-----------------HHHHHHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhcCCccccc
Q 043760 120 PDAASTRLIWVGS-----------------TEVLLENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTSTAIEVNA 182 (345)
Q Consensus 120 ~~~~~~~~~~~~~-----------------~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~ 182 (345)
+++... +..+.+ ++.|++.+.+ +|.+|..|+||||+|+..|+.+++++|++..+++++.
T Consensus 193 ad~n~~-d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad---~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~ 268 (337)
T 4g8k_A 193 ADVNAC-DNMGRNALIHALLSSDDSDVEAITHLLLDHGAD---VNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEIND 268 (337)
T ss_dssp CCTTCC-CTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCC---TTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTC
T ss_pred CCcCcc-CCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCC---CCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccC
Confidence 665433 222222 4566777766 8999999999999999999999999999988999999
Q ss_pred cCCCCCcHHHHHHhcCCCCchhhHHHHHHHccccccc
Q 043760 183 VTANGFTAWDILAQSKRDIKDWDTGELLRRAGAISAK 219 (345)
Q Consensus 183 ~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga~~~~ 219 (345)
+|.+|+||||+|+. .++.+++++|+++||+++.
T Consensus 269 ~d~~G~TpL~~A~~----~g~~~iv~~Ll~~GAd~n~ 301 (337)
T 4g8k_A 269 TDSDGKTALLLAVE----LKLKKIAELLCKRGASTDC 301 (337)
T ss_dssp BCTTSCBHHHHHHH----TTCHHHHHHHHTTSCSSTT
T ss_pred cCCCCCCHHHHHHH----cCCHHHHHHHHHCCCCCCC
Confidence 99999999999999 8899999999999998753
No 4
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=8.3e-35 Score=249.72 Aligned_cols=188 Identities=25% Similarity=0.300 Sum_probs=174.7
Q ss_pred CCCHHHHHHHHhcCCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHH
Q 043760 2 AGSVNTLLELRQQDPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKAL 81 (345)
Q Consensus 2 ~g~~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~L 81 (345)
.|+++.++.|++.++..... .+..|.||||+|+..|+.+++++|++.+.++ +.+|..|+||||+|+..|+.+++++|
T Consensus 16 ~g~~~~v~~ll~~~~~~~~~--~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~L 92 (231)
T 3aji_A 16 SGKLDELKERILADKSLATR--TDQDSRTALHWACSAGHTEIVEFLLQLGVPV-NDKDDAGWSPLHIAASAGXDEIVKAL 92 (231)
T ss_dssp HTCHHHHHHHHHHCGGGGGC--CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred hCCHHHHHHHHHhchhhhhc--CCCCCCCHHHHHHHcCcHHHHHHHHHhCCCC-CCcCCCCCCHHHHHHHcCHHHHHHHH
Confidence 58999999999998776544 4889999999999999999999999999988 88899999999999999999999999
Q ss_pred HhhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHH
Q 043760 82 LQVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAV 161 (345)
Q Consensus 82 l~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~ 161 (345)
+++|+++ +..|..|.||||+|+..|+.+++++|++.+.+ ++.+|..|.||||+|+
T Consensus 93 l~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------------------------~~~~~~~g~t~L~~A~ 147 (231)
T 3aji_A 93 LVKGAHV-NAVNQNGCTPLHYAASKNRHEIAVMLLEGGAN------------------------PDAKDHYDATAMHRAA 147 (231)
T ss_dssp HHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------------------------TTCCCTTSCCHHHHHH
T ss_pred HHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------------------CCCcCCCCCcHHHHHH
Confidence 9999999 78999999999999999999999999999988 8888999999999999
Q ss_pred HcCCHHHHHHhhhcCCccccccCCCCCcHHHHHHhcCCCCchhhHHHHHHHcccccccccC
Q 043760 162 ADKQIEAIKFLTTSTAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELLRRAGAISAKDLQ 222 (345)
Q Consensus 162 ~~g~~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga~~~~~~~ 222 (345)
..|+.+++++|++. |++++.+|..|+||||+|+. .++.+++++|++.|+++.....
T Consensus 148 ~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~----~~~~~~v~~Ll~~ga~~~~~~~ 203 (231)
T 3aji_A 148 AKGNLKMVHILLFY-KASTNIQDTEGNTPLHLACD----EERVEEAKFLVTQGASIYIENK 203 (231)
T ss_dssp HHTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHH----TTCHHHHHHHHHTTCCSCCCCT
T ss_pred HcCCHHHHHHHHhc-CCCccccCCCCCCHHHHHHH----CCCHHHHHHHHHCCCCCCCCCC
Confidence 99999999999998 89999999999999999999 8889999999999998865333
No 5
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=2.7e-34 Score=245.94 Aligned_cols=195 Identities=21% Similarity=0.205 Sum_probs=176.7
Q ss_pred CCCHHHHHHHHhcCCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCC--CCcccccCCCCchHHHHHHHcCCHHHHH
Q 043760 2 AGSVNTLLELRQQDPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQK--PRIAEELDSRKSSALHIASQKGYVGIVK 79 (345)
Q Consensus 2 ~g~~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~--~~~~~~~d~~g~tpLh~A~~~g~~~iv~ 79 (345)
.|+.++++.|++.++..... .+..|+||||+|+..|+.+++++|++.+ .++....|..|.||||+|+..|+.++++
T Consensus 12 ~g~~~~v~~Ll~~~~~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~ 89 (228)
T 2dzn_A 12 ENEFFKVQELLHSKPSLLLQ--KDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVK 89 (228)
T ss_dssp TTCHHHHHHHHHHCGGGTTC--CCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHH
T ss_pred hCCHHHHHHHHhcCcccccc--CCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHH
Confidence 68999999999999887653 3889999999999999999999999999 6663338899999999999999999999
Q ss_pred HHHhhC--CCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHH
Q 043760 80 ALLQVI--PDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTIL 157 (345)
Q Consensus 80 ~Ll~~~--~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~L 157 (345)
+|+++| +++ +..+..|.||||+|+..|+.+++++|++.|++ ++.+|..|+|||
T Consensus 90 ~Ll~~g~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------------------------~~~~~~~g~t~L 144 (228)
T 2dzn_A 90 SLYDRPLKPDL-NKITNQGVTCLHLAVGKKWFEVSQFLIENGAS------------------------VRIKDKFNQIPL 144 (228)
T ss_dssp HHHSSSSCCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC------------------------SCCCCTTSCCHH
T ss_pred HHHhCCCCccc-ccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCC------------------------ccccCCCCCCHH
Confidence 999998 777 78899999999999999999999999999988 889999999999
Q ss_pred HHHHHcCCHHHHHHhhhcCCccccccCCCCCcHHHHHHhcCCCCchhhHHHHHH-HcccccccccCCccch
Q 043760 158 LLAVADKQIEAIKFLTTSTAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELLR-RAGAISAKDLQLPVNE 227 (345)
Q Consensus 158 h~A~~~g~~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~-~~ga~~~~~~~~~~~~ 227 (345)
|+|+..|+.+++++|++.+.++++.+|..|+||||+|+. .++.+++++|+ +.|++..........+
T Consensus 145 ~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~----~~~~~~v~~Ll~~~ga~~~~~~~~g~t~ 211 (228)
T 2dzn_A 145 HRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALA----EGHGDAAVLLVEKYGAEYDLVDNKGAKA 211 (228)
T ss_dssp HHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHH----TTCHHHHHHHHHHHCCCSCCBCTTSCBG
T ss_pred HHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHH----cCCHHHHHHHHHhcCCCCCccCCCCCcH
Confidence 999999999999999999449999999999999999999 88999999999 8999886644444443
No 6
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.7e-34 Score=246.50 Aligned_cols=205 Identities=22% Similarity=0.220 Sum_probs=156.6
Q ss_pred CCHHHHHHHHhcCCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHHH
Q 043760 3 GSVNTLLELRQQDPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKALL 82 (345)
Q Consensus 3 g~~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll 82 (345)
|+.++++.|++.++++... .+..|+||||+|+..|+.+++++|++.+.++ +.+|..|.||||+|+..|+.+++++|+
T Consensus 2 g~~~~i~~Ll~~g~~~~~~--~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll 78 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQ--TDRTGETALHLAARYSRSDAAKRLLEASADA-NIQDNMGRTPLHAAVSADAQGVFQILI 78 (223)
T ss_dssp ---CCEETTEETTCCTTCC--CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CcHHHHHHHHHcCCCcccc--cCCCCCchHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 6777888888888876554 2677888888888888888888888888887 778888888888888888888888888
Q ss_pred hhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCcc-------------HHHHHHhcCCccccccc
Q 043760 83 QVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGS-------------TEVLLENMGDFELLNAK 149 (345)
Q Consensus 83 ~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~-------------~~~l~~~~~~~~~~~~~ 149 (345)
++++...+..+..|.||||+|+..|+.+++++|++.+++.... +..+.+ ++.|++.+.+ ++.+
T Consensus 79 ~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~ 154 (223)
T 2f8y_A 79 RNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAV-DDLGKSALHWAAAVNNVDAAVVLLKNGAN---KDMQ 154 (223)
T ss_dssp HBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCB-CTTSCBHHHHHHHTTCHHHHHHHHHTTCC---TTCC
T ss_pred HcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCc-CCCCCcHHHHHHHcCCHHHHHHHHHcCCC---CCCc
Confidence 8887444778888888888888888888888888888774332 222222 5555555544 6777
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHhhhcCCccccccCCCCCcHHHHHHhcCCCCchhhHHHHHHHccccccc
Q 043760 150 DDYGMTILLLAVADKQIEAIKFLTTSTAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELLRRAGAISAK 219 (345)
Q Consensus 150 d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga~~~~ 219 (345)
|..|.||||+|+..|+.+++++|+++ |++++.+|..|.||||+|+. .++.+++++|++.|+....
T Consensus 155 ~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~----~~~~~i~~~L~~~g~~~~~ 219 (223)
T 2f8y_A 155 NNREETPLFLAAREGSYETAKVLLDH-FANRDITDHMDRLPRDIAQE----RMHHDIVRLLDEYNLVRSP 219 (223)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHH----TTCHHHHHHHHHTTCSSCC
T ss_pred CCCCcCHHHHHHHcCCHHHHHHHHHc-CCCCccccccCCCHHHHHHH----hcchHHHHHHHHcCCCccc
Confidence 77788888888888888888888877 77888888888888888877 6777788888887776543
No 7
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.8e-34 Score=253.39 Aligned_cols=205 Identities=20% Similarity=0.184 Sum_probs=135.7
Q ss_pred CCCHHHHHHHHhcCCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHH
Q 043760 2 AGSVNTLLELRQQDPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKAL 81 (345)
Q Consensus 2 ~g~~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~L 81 (345)
.|++++|+.|++.++++.... +..|.||||+|+..|+.+++++|++.+.++ +.+|..|.||||+|+..|+.+++++|
T Consensus 15 ~g~~~~v~~Ll~~g~~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~L 91 (285)
T 1wdy_A 15 NEDVDLVQQLLEGGANVNFQE--EEGGWTPLHNAVQMSREDIVELLLRHGADP-VLRKKNGATPFLLAAIAGSVKLLKLF 91 (285)
T ss_dssp TTCHHHHHHHHHTTCCTTCCC--TTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCccccc--CCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 578888888888887755432 667888888888888888888888888887 77788888888888888888888888
Q ss_pred HhhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCccccc---------ccCCcc-------------HHHHHHh
Q 043760 82 LQVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTR---------LIWVGS-------------TEVLLEN 139 (345)
Q Consensus 82 l~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~---------~~~~~~-------------~~~l~~~ 139 (345)
+++|+++ +..|..|.||||+|+..|+.+++++|++.+++..... +..+.+ ++.|++.
T Consensus 92 l~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 170 (285)
T 1wdy_A 92 LSKGADV-NECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDE 170 (285)
T ss_dssp HHTTCCT-TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHT
T ss_pred HHcCCCC-CccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHh
Confidence 8888887 6778888888888888888888888888877654331 112222 4444443
Q ss_pred -cCCcccccccCCCCCCHHHHHHHcCC----HHHHHHhhhcCCccccccCCCCCcHHHHHHhcCCCCchhhHHHHHHH-c
Q 043760 140 -MGDFELLNAKDDYGMTILLLAVADKQ----IEAIKFLTTSTAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELLRR-A 213 (345)
Q Consensus 140 -~~~~~~~~~~d~~g~t~Lh~A~~~g~----~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~-~ 213 (345)
+.+ ++.+|..|+||||+|+..++ .+++++|++. |++++.+|..|+||||+|+. .++.+++++|++ .
T Consensus 171 ~~~~---~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~-g~~~~~~~~~g~t~L~~A~~----~~~~~~v~~Ll~~~ 242 (285)
T 1wdy_A 171 MGAD---VNACDNMGRNALIHALLSSDDSDVEAITHLLLDH-GADVNVRGERGKTPLILAVE----KKHLGLVQRLLEQE 242 (285)
T ss_dssp SCCC---TTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHT-TCCSSCCCTTSCCHHHHHHH----TTCHHHHHHHHHSS
T ss_pred cCCC---CCccCCCCCCHHHHHHHccccchHHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHH----cCCHHHHHHHHhcc
Confidence 222 44444455555555555544 4455555544 44555555555555555554 444455555554 4
Q ss_pred ccccc
Q 043760 214 GAISA 218 (345)
Q Consensus 214 ga~~~ 218 (345)
|++.+
T Consensus 243 g~~~~ 247 (285)
T 1wdy_A 243 HIEIN 247 (285)
T ss_dssp SCCTT
T ss_pred CCCcc
Confidence 44443
No 8
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=4.2e-35 Score=255.51 Aligned_cols=187 Identities=23% Similarity=0.243 Sum_probs=157.5
Q ss_pred CCHHHHHHHHhcCCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHHH
Q 043760 3 GSVNTLLELRQQDPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKALL 82 (345)
Q Consensus 3 g~~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll 82 (345)
++.++++.|++.++++... .|..|+||||+|+..|+.+++++|++.++++ +.+|..|.||||+|+..|+.+++++|+
T Consensus 34 ~~~~~v~~Ll~~g~~~~~~--~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll 110 (253)
T 1yyh_A 34 DAPAVISDFIYQGASLHNQ--TDRTGETALHLAARYSRSDAAKRLLEASADA-NIQDNMGRTPLHAAVSADAQGVFQILI 110 (253)
T ss_dssp ------------------C--CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred CChHHHHHHHHccCCcccc--cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 4889999999999887654 3788999999999999999999999999998 889999999999999999999999999
Q ss_pred hhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHHH
Q 043760 83 QVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAVA 162 (345)
Q Consensus 83 ~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~ 162 (345)
++++...+..+..|.||||+|+..|+.+++++|++.+++ ++.+|..|+||||+|+.
T Consensus 111 ~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------------------~~~~d~~g~t~L~~A~~ 166 (253)
T 1yyh_A 111 RNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHAD------------------------VNAVDDLGKSALHWAAA 166 (253)
T ss_dssp HSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCC------------------------TTCBCTTSCBHHHHHHH
T ss_pred HcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCC------------------------CCCcCCCCCCHHHHHHH
Confidence 999844488999999999999999999999999999998 88899999999999999
Q ss_pred cCCHHHHHHhhhcCCccccccCCCCCcHHHHHHhcCCCCchhhHHHHHHHccccccccc
Q 043760 163 DKQIEAIKFLTTSTAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELLRRAGAISAKDL 221 (345)
Q Consensus 163 ~g~~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga~~~~~~ 221 (345)
.|+.+++++|++. |++++.+|..|+||||+|+. .++.+++++|++.|++.....
T Consensus 167 ~~~~~~v~~Ll~~-ga~~~~~~~~g~tpL~~A~~----~~~~~~v~~Ll~~ga~~~~~d 220 (253)
T 1yyh_A 167 VNNVDAAVVLLKN-GANKDMQNNREETPLFLAAR----EGSYETAKVLLDHFANRDITD 220 (253)
T ss_dssp HTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHH----HTCHHHHHHHHHTTCCTTCCC
T ss_pred cCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHH----CCCHHHHHHHHHcCCCccccc
Confidence 9999999999999 89999999999999999999 788999999999999876533
No 9
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=3.1e-34 Score=260.82 Aligned_cols=213 Identities=22% Similarity=0.184 Sum_probs=184.2
Q ss_pred CCCHHHHHHHHhcCCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHH
Q 043760 2 AGSVNTLLELRQQDPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKAL 81 (345)
Q Consensus 2 ~g~~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~L 81 (345)
+|+++.|+.|+.......+ ..|..|.||||+|+..|+.+++++|++.+.++ +.+|..|.||||+|+..|+.+++++|
T Consensus 34 ~g~~~~v~~ll~~~~~~~~--~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~iv~~L 110 (351)
T 3utm_A 34 SGNEEKLMALLTPLNVNCH--ASDGRKSTPLHLAAGYNRVRIVQLLLQHGADV-HAKDKGGLVPLHNACSYGHYEVTELL 110 (351)
T ss_dssp HTCHHHHHHHCCTTTTTCC--CSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred cCCHHHHHHHHHhcCCCcc--cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHCCCHHHHHHH
Confidence 5899999999987443322 23888999999999999999999999999998 88999999999999999999999999
Q ss_pred HhhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccc----------------------------------
Q 043760 82 LQVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRL---------------------------------- 127 (345)
Q Consensus 82 l~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~---------------------------------- 127 (345)
+++|+++ +..|..|.||||+|+..|+.+++++|+++|+++.....
T Consensus 111 l~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (351)
T 3utm_A 111 LKHGACV-NAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREA 189 (351)
T ss_dssp HHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhc
Confidence 9999999 78999999999999999999999999999887543211
Q ss_pred -------------------cCCc----------------cHHHHHHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHh
Q 043760 128 -------------------IWVG----------------STEVLLENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFL 172 (345)
Q Consensus 128 -------------------~~~~----------------~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~L 172 (345)
..+. .++.|++.+.+ ++.+|..|+||||+|+..|+.+++++|
T Consensus 190 ~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~---~~~~~~~g~t~L~~A~~~g~~~~v~~L 266 (351)
T 3utm_A 190 DLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGAN---VNEKNKDFMTPLHVAAERAHNDVMEVL 266 (351)
T ss_dssp CHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCC---TTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred cHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCC---cCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 0111 15566666665 889999999999999999999999999
Q ss_pred hhcCCccccccCCCCCcHHHHHHhcCCCCchhhHHHHHHHcccccccccCCccc
Q 043760 173 TTSTAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELLRRAGAISAKDLQLPVN 226 (345)
Q Consensus 173 l~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga~~~~~~~~~~~ 226 (345)
++. |++++.+|..|+||||+|+. .++.+++++|++.|+++.........
T Consensus 267 l~~-ga~~n~~d~~g~t~L~~A~~----~~~~~~v~~Ll~~gad~~~~~~~g~t 315 (351)
T 3utm_A 267 HKH-GAKMNALDSLGQTALHRAAL----AGHLQTCRLLLSYGSDPSIISLQGFT 315 (351)
T ss_dssp HHT-TCCTTCCCTTSCCHHHHHHH----HTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred HHC-CCCCCCcCCCCCCHHHHHHH----cCcHHHHHHHHHcCCCCCCcCCCCCC
Confidence 999 99999999999999999999 88999999999999988654433333
No 10
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=2.8e-34 Score=251.52 Aligned_cols=193 Identities=23% Similarity=0.206 Sum_probs=173.9
Q ss_pred CCCHHHHHHHHhcCCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHH
Q 043760 2 AGSVNTLLELRQQDPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKAL 81 (345)
Q Consensus 2 ~g~~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~L 81 (345)
.|+.++++.|++.+.++... |..|.||||+|+..|+.+++++|++.+.++ +.+|..|.||||+|+..|+.+++++|
T Consensus 13 ~g~~~~v~~Ll~~g~~~~~~---~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~L 88 (261)
T 2xai_A 13 HGHQLSLRNLISQGWAVNII---TADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPLFNACVSGSWDCVNLL 88 (261)
T ss_dssp HTCHHHHHHHHHTTCCSSCC---CTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCCCc---CCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 48999999999999876544 889999999999999999999999999998 88999999999999999999999999
Q ss_pred HhhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHH
Q 043760 82 LQVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAV 161 (345)
Q Consensus 82 l~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~ 161 (345)
+++|+++ + .+..|.||||+|+..|+.+++++|++++++ ++.+|..|.||||+|+
T Consensus 89 l~~g~~~-~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------------------~~~~~~~g~t~L~~A~ 142 (261)
T 2xai_A 89 LQHGASV-Q-PESDLASPIHEAARRGHVECVNSLIAYGGN------------------------IDHKISHLGTPLYLAC 142 (261)
T ss_dssp HHTTCCS-S-CSCTTCCHHHHHHHTTCHHHHHHHHHTTCC------------------------TTCCBTTTBCHHHHHH
T ss_pred HHCCCCC-C-CCCCCCCHHHHHHHcCcHHHHHHHHHcCCC------------------------CCcCCCCCCCHHHHHH
Confidence 9999998 3 456699999999999999999999999988 8899999999999999
Q ss_pred HcCCHHHHHHhhhcCCccccccCCCCCcHHHHHHhcCCCCchhhHHHHHHHcccccccccCCccchhhh
Q 043760 162 ADKQIEAIKFLTTSTAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELLRRAGAISAKDLQLPVNELAV 230 (345)
Q Consensus 162 ~~g~~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga~~~~~~~~~~~~~~~ 230 (345)
..|+.+++++|++. |++++. |..|.||||+|+. .++.+++++|++.|++..........++..
T Consensus 143 ~~~~~~~v~~Ll~~-g~~~~~-~~~g~t~Lh~A~~----~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~ 205 (261)
T 2xai_A 143 ENQQRACVKKLLES-GADVNQ-GKGQDSPLHAVAR----TASEELACLLMDFGADTQAKNAEGKRPVEL 205 (261)
T ss_dssp HTTCHHHHHHHHHH-TCCTTC-CBTTBCHHHHHHH----HTCHHHHHHHHHTTCCTTCCCTTSCCGGGG
T ss_pred HhCCHHHHHHHHHc-CCCCCC-CCCCCChHHHHHH----cCCHHHHHHHHHcCCCCCCcCCCCCChhhh
Confidence 99999999999999 899995 8899999999999 788999999999999986644444444333
No 11
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=6e-35 Score=249.27 Aligned_cols=173 Identities=23% Similarity=0.239 Sum_probs=152.5
Q ss_pred cCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHh
Q 043760 38 LGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVR 117 (345)
Q Consensus 38 ~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~ 117 (345)
.|+.+++++|+++++++....|..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|+.+++++|++
T Consensus 1 gg~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 79 (223)
T 2f8y_A 1 GDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADA-NIQDNMGRTPLHAAVSADAQGVFQILIR 79 (223)
T ss_dssp ----CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 367889999999999986667999999999999999999999999999999 7899999999999999999999999999
Q ss_pred cCCCcccccccCCcc-------------HHHHHHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhcCCccccccC
Q 043760 118 AKPDAASTRLIWVGS-------------TEVLLENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTSTAIEVNAVT 184 (345)
Q Consensus 118 ~~~~~~~~~~~~~~~-------------~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n 184 (345)
.++......+..+.+ ++.|++.+.+ ++.+|..|+||||+|+..|+.+++++|++. |++++.+|
T Consensus 80 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~ 155 (223)
T 2f8y_A 80 NRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHAD---VNAVDDLGKSALHWAAAVNNVDAAVVLLKN-GANKDMQN 155 (223)
T ss_dssp BTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC---TTCBCTTSCBHHHHHHHTTCHHHHHHHHHT-TCCTTCCC
T ss_pred cCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCC---CcCcCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCcC
Confidence 988544444444544 7777777666 888999999999999999999999999999 89999999
Q ss_pred CCCCcHHHHHHhcCCCCchhhHHHHHHHccccccc
Q 043760 185 ANGFTAWDILAQSKRDIKDWDTGELLRRAGAISAK 219 (345)
Q Consensus 185 ~~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga~~~~ 219 (345)
..|.||||+|+. .++.+++++|++.|++...
T Consensus 156 ~~g~t~L~~A~~----~~~~~~v~~Ll~~ga~~~~ 186 (223)
T 2f8y_A 156 NREETPLFLAAR----EGSYETAKVLLDHFANRDI 186 (223)
T ss_dssp TTCCCHHHHHHH----HTCHHHHHHHHHTTCCTTC
T ss_pred CCCcCHHHHHHH----cCCHHHHHHHHHcCCCCcc
Confidence 999999999999 7889999999999998754
No 12
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=2e-34 Score=247.62 Aligned_cols=185 Identities=23% Similarity=0.256 Sum_probs=166.8
Q ss_pred CCCHHHHHHHHhc-CCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcc----cccCCCCchHHHHHHHcCCHH
Q 043760 2 AGSVNTLLELRQQ-DPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRIA----EELDSRKSSALHIASQKGYVG 76 (345)
Q Consensus 2 ~g~~~~v~~ll~~-~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~----~~~d~~g~tpLh~A~~~g~~~ 76 (345)
.|+.++++.|++. +.++... |..|+||||+|+..|+.+++++|++.++++. +.+|..|.||||+|+..|+.+
T Consensus 13 ~g~~~~v~~Ll~~~g~~~~~~---~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 89 (232)
T 2rfa_A 13 ENDVQALSKLLKFEGCEVHQR---GAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVN 89 (232)
T ss_dssp TTCHHHHHHHHTTTCSCTTCC---CTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHH
T ss_pred cCCHHHHHHHHHhcCCCcccC---CCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHH
Confidence 6899999999998 6665443 8899999999999999999999999998763 445779999999999999999
Q ss_pred HHHHHHhhCCCCCcCCCC-------------CCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCc
Q 043760 77 IVKALLQVIPDKCSDTDV-------------DGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDF 143 (345)
Q Consensus 77 iv~~Ll~~~~~~~~~~d~-------------~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~ 143 (345)
++++|+++|+++ +..+. .|.||||+|+..|+.+++++|+++|++
T Consensus 90 ~v~~Ll~~g~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---------------------- 146 (232)
T 2rfa_A 90 LVRALLARGASV-SARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGAD---------------------- 146 (232)
T ss_dssp HHHHHHHTTCCT-TCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCC----------------------
T ss_pred HHHHHHhCCCCC-CcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCC----------------------
Confidence 999999999998 55544 799999999999999999999999998
Q ss_pred ccccccCCCCCCHHHHHHHcCCHHHH----HHhhhcCCccc------cccCCCCCcHHHHHHhcCCCCchhhHHHHHHHc
Q 043760 144 ELLNAKDDYGMTILLLAVADKQIEAI----KFLTTSTAIEV------NAVTANGFTAWDILAQSKRDIKDWDTGELLRRA 213 (345)
Q Consensus 144 ~~~~~~d~~g~t~Lh~A~~~g~~~~v----~~Ll~~~~~~~------~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~ 213 (345)
++.+|..|+||||+|+..|+.+++ ++|++. |+++ +.+|..|+||||+|+. .++.+++++|+++
T Consensus 147 --~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~-g~~~~~~~~~~~~~~~g~tpl~~A~~----~g~~~~v~~Ll~~ 219 (232)
T 2rfa_A 147 --IRAQDSLGNTVLHILILQPNKTFACQMYNLLLSY-DGGDHLKSLELVPNNQGLTPFKLAGV----EGNIVMFQHLMQK 219 (232)
T ss_dssp --TTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHT-TCSCSSCCGGGCCCTTSCCHHHHHHH----HTCHHHHHHHHHH
T ss_pred --CCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhc-CCchhhhhhhccCCCCCCCHHHHHHH----cCCHHHHHHHHhc
Confidence 899999999999999999999988 999999 7777 6899999999999999 8899999999999
Q ss_pred cccccc
Q 043760 214 GAISAK 219 (345)
Q Consensus 214 ga~~~~ 219 (345)
|+....
T Consensus 220 g~~~~~ 225 (232)
T 2rfa_A 220 RKHIAA 225 (232)
T ss_dssp HHHC--
T ss_pred Cccchh
Confidence 987654
No 13
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=8.3e-34 Score=244.42 Aligned_cols=193 Identities=22% Similarity=0.218 Sum_probs=167.8
Q ss_pred CCCHHHHHHHHhcCCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHH
Q 043760 2 AGSVNTLLELRQQDPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKAL 81 (345)
Q Consensus 2 ~g~~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~L 81 (345)
.|+.++++.|++.+.++... +..|.||||+|+..|+.+++++|++.+.++ +.++..|.||||+|+..|+.+++++|
T Consensus 21 ~g~~~~v~~Ll~~g~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~L 96 (237)
T 3b7b_A 21 AGHVDICHMLVQAGANIDTC---SEDQRTPLMEAAENNHLEAVKYLIKAGALV-DPKDAEGSTCLHLAAKKGHYEVVQYL 96 (237)
T ss_dssp HTCHHHHHHHHHTTCCTTCC---CTTCCCHHHHHHHTTCHHHHHHHHTTTCCC-CCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred cCcHHHHHHHHHcCCCcCcc---CCCCCCHHHHHHHhCCHHHHHHHHhCCCCC-CCCCCCCCcHHHHHHHcCCHHHHHHH
Confidence 47888899999988775543 778899999999999999999999888887 77888899999999999999999999
Q ss_pred HhhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHH
Q 043760 82 LQVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAV 161 (345)
Q Consensus 82 l~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~ 161 (345)
++.++...+..+..|.||||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+
T Consensus 97 l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------------------------~~~~~~~g~t~L~~A~ 152 (237)
T 3b7b_A 97 LSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSD------------------------INIRDNEENICLHWAA 152 (237)
T ss_dssp HTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------------------------TTCCCTTSCCHHHHHH
T ss_pred HhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC------------------------CCccCCCCCCHHHHHH
Confidence 9888433377888899999999999999999999988887 8889999999999999
Q ss_pred HcCCHHHHHHhhhcCCccccccCCCCCcHHHHHHhcCCCCchhhHHHHHHHcccccccccCCccch
Q 043760 162 ADKQIEAIKFLTTSTAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELLRRAGAISAKDLQLPVNE 227 (345)
Q Consensus 162 ~~g~~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga~~~~~~~~~~~~ 227 (345)
..|+.+++++|++. |++++.+|..|.||||+|+. .++.+++++|++.|++..........+
T Consensus 153 ~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~----~~~~~~v~~Ll~~gad~~~~d~~g~t~ 213 (237)
T 3b7b_A 153 FSGCVDIAEILLAA-KCDLHAVNIHGDSPLHIAAR----ENRYDCVVLFLSRDSDVTLKNKEGETP 213 (237)
T ss_dssp HHCCHHHHHHHHTT-TCCTTCCCTTCCCHHHHHHH----TTCHHHHHHHHTTTCCTTCCCTTSCCH
T ss_pred HCCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHH----hCCHhHHHHHHHcCCCCCccCCCCCCH
Confidence 99999999999999 89999999999999999999 889999999999999886544444444
No 14
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=4e-34 Score=240.20 Aligned_cols=179 Identities=24% Similarity=0.309 Sum_probs=165.4
Q ss_pred CCCHHHHHHHHhcCC-ccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHH
Q 043760 2 AGSVNTLLELRQQDP-LILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKA 80 (345)
Q Consensus 2 ~g~~~~v~~ll~~~~-~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~ 80 (345)
.|+.+.++.|++.++ ++.. .+..|.||||+|+..|+.+++++|++.++++ +.+|..|.||||+|+..|+.+++++
T Consensus 15 ~g~~~~v~~ll~~~~~~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~ 90 (201)
T 3hra_A 15 QRDTKKVKEILQDTTYQVDE---VDTEGNTPLNIAVHNNDIEIAKALIDRGADI-NLQNSISDSPYLYAGAQGRTEILAY 90 (201)
T ss_dssp TTCHHHHHHHHTCTTCCTTC---CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred hccHHHHHHHHHcCCCCCCC---CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHH
Confidence 689999999999987 4333 3889999999999999999999999999998 8899999999999999999999999
Q ss_pred HHhhCC-CCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcC-CCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHH
Q 043760 81 LLQVIP-DKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAK-PDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILL 158 (345)
Q Consensus 81 Ll~~~~-~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh 158 (345)
|++.+. ++ +..+..|.||||+|+..|+.+++++|++.+ .+ ++.+|..|+||||
T Consensus 91 Ll~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~------------------------~~~~~~~g~t~L~ 145 (201)
T 3hra_A 91 MLKHATPDL-NKHNRYGGNALIPAAEKGHIDNVKLLLEDGRED------------------------IDFQNDFGYTALI 145 (201)
T ss_dssp HHHHSCCCT-TCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCC------------------------TTCCCTTSCCHHH
T ss_pred HHhccCccc-ccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCC------------------------cCCCCCCCCCHHH
Confidence 996554 55 889999999999999999999999999998 55 8899999999999
Q ss_pred HHHHcCC-----HHHHHHhhhcCCccccccCCCCCcHHHHHHhcCCCCchhhHHHHHHHcc
Q 043760 159 LAVADKQ-----IEAIKFLTTSTAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELLRRAG 214 (345)
Q Consensus 159 ~A~~~g~-----~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~g 214 (345)
+|+..++ .+++++|++. |++++.+|..|+||||+|+. .++.+++++|++.|
T Consensus 146 ~A~~~~~~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~----~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 146 EAVGLREGNQLYQDIVKLLMEN-GADQSIKDNSGRTAMDYANQ----KGYTEISKILAQYN 201 (201)
T ss_dssp HHHHSSCCSHHHHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHH----HTCHHHHHHHHTCC
T ss_pred HHHHhccchhhHHHHHHHHHHC-CCCCCccCCCCCCHHHHHHH----cCCHhHHHHHHhcC
Confidence 9999998 9999999999 89999999999999999999 88999999999876
No 15
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1.1e-33 Score=244.14 Aligned_cols=186 Identities=23% Similarity=0.260 Sum_probs=163.6
Q ss_pred CCCHHHHHHHHh----cCCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHH
Q 043760 2 AGSVNTLLELRQ----QDPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGI 77 (345)
Q Consensus 2 ~g~~~~v~~ll~----~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~i 77 (345)
.|++++++.|++ .+.++.. .|..|.||||+|+..|+.+++++|++.+.++ +.+|..|.||||+|+..|+.++
T Consensus 19 ~g~~~~v~~Ll~~~~~~~~~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~ 94 (241)
T 1k1a_A 19 QGNLPAVHRLVNLFQQGGRELDI---YNNLRQTPLHLAVITTLPSVVRLLVTAGASP-MALDRHGQTAAHLACEHRSPTC 94 (241)
T ss_dssp TTCHHHHHHHHHHHHHTTCCSCC---CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHH
T ss_pred cCCHHHHHHHHHHHHhcCCCCCc---ccccCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHH
Confidence 588888888887 4555433 3788999999999999999999999988887 7788899999999999999999
Q ss_pred HHHHHhhCC----CCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccC-CC
Q 043760 78 VKALLQVIP----DKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKD-DY 152 (345)
Q Consensus 78 v~~Ll~~~~----~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d-~~ 152 (345)
+++|++.++ ++ +..+..|.||||+|+..|+.+++++|++.+++ ++..+ ..
T Consensus 95 ~~~Ll~~~~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------------------------~~~~~~~~ 149 (241)
T 1k1a_A 95 LRALLDSAAPGTLDL-EARNYDGLTALHVAVNTECQETVQLLLERGAD------------------------IDAVDIKS 149 (241)
T ss_dssp HHHHHHHSCTTSCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC------------------------TTCCCTTT
T ss_pred HHHHHHcCCCccccc-cccCcCCCcHHHHHHHcCCHHHHHHHHHcCCC------------------------cccccccC
Confidence 999999887 55 67788899999999999999999999998887 77777 78
Q ss_pred CCCHHHHHHHcCCHHHHHHhhhcCCccccccCCCCCcHHHHHHhcCCCCchhhHHHHHHHccccccccc
Q 043760 153 GMTILLLAVADKQIEAIKFLTTSTAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELLRRAGAISAKDL 221 (345)
Q Consensus 153 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga~~~~~~ 221 (345)
|.||||+|+..|+.+++++|++. |++++.+|..|+||||+|+. .++.+++++|++.|+++....
T Consensus 150 g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~----~~~~~~v~~Ll~~ga~~~~~~ 213 (241)
T 1k1a_A 150 GRSPLIHAVENNSLSMVQLLLQH-GANVNAQMYSGSSALHSASG----RGLLPLVRTLVRSGADSSLKN 213 (241)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHT-TCCTTCBCTTSCBHHHHHHH----HTCHHHHHHHHHTTCCTTCCC
T ss_pred CCcHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHH----cCCHHHHHHHHhcCCCCCCcC
Confidence 99999999999999999999999 99999999999999999999 788999999999999886533
No 16
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.8e-34 Score=253.79 Aligned_cols=199 Identities=22% Similarity=0.195 Sum_probs=152.8
Q ss_pred CCCHHHHHHHHhcCCcccc-----CCCCCCCCCcHHHHHHHcCCH-HHHHHHhcCCCCcccccCCCCchHHHHHHHcCCH
Q 043760 2 AGSVNTLLELRQQDPLILE-----RPTVNCLSETPLHVAALLGHE-DFAKEILPQKPRIAEELDSRKSSALHIASQKGYV 75 (345)
Q Consensus 2 ~g~~~~v~~ll~~~~~~~~-----~~~~~~~g~t~Lh~Aa~~g~~-~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~ 75 (345)
+|++++|+.||+.+..... ....+..|.||||.|+..++. .++++|++.|.++ +.+|..|+||||+|+..|+.
T Consensus 21 ~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadv-n~~d~~G~TpLh~A~~~g~~ 99 (269)
T 4b93_B 21 DGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGV-NVTSQDGSSPLHVAALHGRA 99 (269)
T ss_dssp TTCHHHHHHHHTCC----------------------------------------CCCCT-TCCCTTSCCHHHHHHHTTCT
T ss_pred cCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCcH
Confidence 6999999999998875322 123367899999999998876 4889999999998 99999999999999999999
Q ss_pred HHHHHHHhhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCC
Q 043760 76 GIVKALLQVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMT 155 (345)
Q Consensus 76 ~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t 155 (345)
+++++|++.++++ ...+..|.||||+|+..++.+++++|++.+++ ++.+|..|+|
T Consensus 100 ~~v~~Ll~~~a~~-~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~------------------------~n~~d~~g~T 154 (269)
T 4b93_B 100 DLIPLLLKHGANA-GARNADQAVPLHLACQQGHFQVVKCLLDSNAK------------------------PNKKDLSGNT 154 (269)
T ss_dssp THHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC------------------------SCCCCTTCCC
T ss_pred HHHHHHHhcCCCc-CccCCCCCCccccccccChHHHHHHHHHCCCC------------------------CCCCCCCCCC
Confidence 9999999999999 78999999999999999999999999999998 8999999999
Q ss_pred HHHHHHHcCCHHHHHHhhhcCCccccccCCCCCcHHHHHHhcCCCCchhhHHHHHHHcccccccccCCccchhhhc
Q 043760 156 ILLLAVADKQIEAIKFLTTSTAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELLRRAGAISAKDLQLPVNELAVT 231 (345)
Q Consensus 156 ~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga~~~~~~~~~~~~~~~~ 231 (345)
|||+|+..|+.+++++|++. |+++|.+|..|+||||+|+. .++.+++++|++.||+++.......+++...
T Consensus 155 pL~~A~~~g~~~~v~~Ll~~-gadvn~~~~~g~t~Lh~A~~----~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A 225 (269)
T 4b93_B 155 PLIYACSGGHHELVALLLQH-GASINASNNKGNTALHEAVI----EKHVFVVELLLLHGASVQVLNKRQRTAVDCA 225 (269)
T ss_dssp HHHHHHHTTCGGGHHHHHHT-TCCTTCBCTTSCBHHHHHHH----TTCHHHHHHHHHTTCCSCCCCTTSCCSGGGS
T ss_pred HHHHHHHCCCHHHHHHHHHC-CCCCCccccCCCcHHHHHHH----cCCHHHHHHHHHCCCCCCCcCCCCCCHHHHH
Confidence 99999999999999999999 99999999999999999999 8899999999999999876444444444433
No 17
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=3.8e-34 Score=245.59 Aligned_cols=181 Identities=23% Similarity=0.259 Sum_probs=172.0
Q ss_pred CCCHHHHHHHHhcCCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHH
Q 043760 2 AGSVNTLLELRQQDPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKAL 81 (345)
Q Consensus 2 ~g~~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~L 81 (345)
.|+.++++.|++.+.++... +..|+||||+|+..|+.+++++|++.+.++ +.+|..|.||||+|+..|+.+++++|
T Consensus 50 ~g~~~~v~~Ll~~g~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~L 125 (231)
T 3aji_A 50 AGHTEIVEFLLQLGVPVNDK---DDAGWSPLHIAASAGXDEIVKALLVKGAHV-NAVNQNGCTPLHYAASKNRHEIAVML 125 (231)
T ss_dssp HTCHHHHHHHHHTTCCSCCC---CTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred cCcHHHHHHHHHhCCCCCCc---CCCCCCHHHHHHHcCHHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 48899999999999876554 889999999999999999999999999998 88899999999999999999999999
Q ss_pred HhhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHH
Q 043760 82 LQVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAV 161 (345)
Q Consensus 82 l~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~ 161 (345)
+++|+++ +..+..|.||||+|+..|+.+++++|++.+++ ++.+|..|+||||+|+
T Consensus 126 l~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------------------~~~~~~~g~t~L~~A~ 180 (231)
T 3aji_A 126 LEGGANP-DAKDHYDATAMHRAAAKGNLKMVHILLFYKAS------------------------TNIQDTEGNTPLHLAC 180 (231)
T ss_dssp HHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC------------------------SCCCCTTSCCHHHHHH
T ss_pred HHcCCCC-CCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCC------------------------ccccCCCCCCHHHHHH
Confidence 9999999 78999999999999999999999999999988 8899999999999999
Q ss_pred HcCCHHHHHHhhhcCCccccccCCCCCcHHHHHHhcCCCCchhhHHHHHHHcccc
Q 043760 162 ADKQIEAIKFLTTSTAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELLRRAGAI 216 (345)
Q Consensus 162 ~~g~~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga~ 216 (345)
..|+.+++++|+++ |++++.+|..|.||||+|+. .++.+++++|.+.|++
T Consensus 181 ~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~----~~~~~i~~lL~~~~a~ 230 (231)
T 3aji_A 181 DEERVEEAKFLVTQ-GASIYIENKEEKTPLQVAKG----GLGLILKRLAEGEEAS 230 (231)
T ss_dssp HTTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHSCH----HHHHHHHHHHHHHHHC
T ss_pred HCCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHh----hHHHHHHHHHcccccc
Confidence 99999999999999 99999999999999999988 7889999999999875
No 18
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.7e-33 Score=249.81 Aligned_cols=190 Identities=22% Similarity=0.203 Sum_probs=126.0
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHHHHH
Q 043760 25 NCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLHLAA 104 (345)
Q Consensus 25 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~ 104 (345)
+..|+||||+||..|+.+++++|++.+.++ +.+|..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+
T Consensus 56 ~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~t~L~~A~ 133 (285)
T 3d9h_A 56 AVSDWSPMHEAAIHGHQLSLRNLISQGWAV-NIITADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPLFNAC 133 (285)
T ss_dssp SCCSCCHHHHHHHTTCHHHHHHHHHTTCCS-CEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHH
T ss_pred CccCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCC-CCCCCCCCCHHHHHH
Confidence 445555555555555555555555555554 555555555555555555555555555555555 455555555555555
Q ss_pred HcCcHHHHHHHHhcCCCcccccccCCcc-------------HHHHHHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHH
Q 043760 105 MRGHIDVLEELVRAKPDAASTRLIWVGS-------------TEVLLENMGDFELLNAKDDYGMTILLLAVADKQIEAIKF 171 (345)
Q Consensus 105 ~~g~~~iv~~Ll~~~~~~~~~~~~~~~~-------------~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~ 171 (345)
..|+.+++++|++.+++..... .+.+ ++.|++.+.+ ++.+|..|+||||+|+..|+.+++++
T Consensus 134 ~~~~~~~v~~Ll~~g~~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~g~~---~~~~d~~g~t~L~~A~~~~~~~~v~~ 208 (285)
T 3d9h_A 134 VSGSWDCVNLLLQHGASVQPES--DLASPIHEAARRGHVECVNSLIAYGGN---IDHKISHLGTPLYLACENQQRACVKK 208 (285)
T ss_dssp HHTCHHHHHHHHHTTCCSSCSC--TTSCHHHHHHHHTCHHHHHHHHHTTCC---TTCCBTTTBCHHHHHHHTTCHHHHHH
T ss_pred HcCHHHHHHHHHHCCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCC---CCCcCCCCCCHHHHHHHcCcHHHHHH
Confidence 5555555555555554432211 1221 4444444443 88999999999999999999999999
Q ss_pred hhhcCCccccccCCCCCcHHHHHHhcCCCCchhhHHHHHHHcccccccccCCccch
Q 043760 172 LTTSTAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELLRRAGAISAKDLQLPVNE 227 (345)
Q Consensus 172 Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga~~~~~~~~~~~~ 227 (345)
|++. |++++. |..|+||||+|+. .++.+++++|++.|++..........+
T Consensus 209 Ll~~-ga~~~~-~~~g~t~L~~A~~----~~~~~~v~~Ll~~gad~~~~d~~g~t~ 258 (285)
T 3d9h_A 209 LLES-GADVNQ-GKGQDSPLHAVVR----TASEELACLLMDFGADTQAKNAEGKRP 258 (285)
T ss_dssp HHHT-TCCTTC-CBTTBCHHHHHHH----TTCHHHHHHHHHTTCCTTCCCTTSCCG
T ss_pred HHHC-CCCCCC-CCCCCCHHHHHHH----cCCHHHHHHHHHCCCCCCCcCCCCCCH
Confidence 9999 889995 8999999999999 888999999999999886544433333
No 19
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=9.7e-35 Score=250.39 Aligned_cols=188 Identities=25% Similarity=0.292 Sum_probs=164.9
Q ss_pred CCCHHHHHHHHhcCCcc-ccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHH
Q 043760 2 AGSVNTLLELRQQDPLI-LERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKA 80 (345)
Q Consensus 2 ~g~~~~v~~ll~~~~~~-~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~ 80 (345)
.|+.++++.|++.++.. ......+..|+||||+|+..|+.+++++|++.|+++ +.+|..|.||||+|+..|+.+++++
T Consensus 18 ~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~ 96 (236)
T 1ikn_D 18 HEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDP-ELRDFRGNTPLHLACEQGCLASVGV 96 (236)
T ss_dssp TTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCS-CCCCTTCCCHHHHHHHHTCHHHHHH
T ss_pred cCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHH
Confidence 46777788888876531 012234788999999999999999999999999988 8889999999999999999999999
Q ss_pred HHhhCCCC-----CcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCC-CCC
Q 043760 81 LLQVIPDK-----CSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDD-YGM 154 (345)
Q Consensus 81 Ll~~~~~~-----~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~-~g~ 154 (345)
|++.+++. ....+..|.||||+|+..|+.+++++|++.|++ ++.++. .|+
T Consensus 97 Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------------------~~~~~~~~g~ 152 (236)
T 1ikn_D 97 LTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGAD------------------------VNAQEPCNGR 152 (236)
T ss_dssp HHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCC------------------------TTCCCTTTCC
T ss_pred HHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------------------CCCCCCCCCC
Confidence 99998752 367888999999999999999999999999988 888887 999
Q ss_pred CHHHHHHHcCCHHHHHHhhhcCCccccccCCCCCcHHHHHHhcCCCCchhhHHHHHHHccccccc
Q 043760 155 TILLLAVADKQIEAIKFLTTSTAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELLRRAGAISAK 219 (345)
Q Consensus 155 t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga~~~~ 219 (345)
||||+|+..|+.+++++|++. |++++.+|..|+||||+|+. .++.+++++|++.|++...
T Consensus 153 tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpl~~A~~----~~~~~~~~~Ll~~ga~~~~ 212 (236)
T 1ikn_D 153 TALHLAVDLQNPDLVSLLLKC-GADVNRVTYQGYSPYQLTWG----RPSTRIQQQLGQLTLENLQ 212 (236)
T ss_dssp CHHHHHHHTTCHHHHHHHHTT-TCCSCCCCTTCCCGGGGCTT----SSCHHHHHHHHTTSCGGGS
T ss_pred CHHHHHHHcCCHHHHHHHHHc-CCCCCcccCCCCCHHHHHHc----cCchHHHHHHHHcchhhhh
Confidence 999999999999999999999 99999999999999999999 8899999999999998754
No 20
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1.3e-33 Score=230.78 Aligned_cols=151 Identities=30% Similarity=0.397 Sum_probs=140.0
Q ss_pred CCCHHHHHHHHhcCCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHH
Q 043760 2 AGSVNTLLELRQQDPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKAL 81 (345)
Q Consensus 2 ~g~~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~L 81 (345)
+|++++|+.|++.|+++... |..|+||||+|+..|+.+++++|++.+.++ +.+|..|+||||+|+..|+.+++++|
T Consensus 14 ~G~~~~v~~Ll~~Gadvn~~---d~~g~t~l~~a~~~~~~~~~~~ll~~gad~-~~~d~~g~TpLh~A~~~g~~~~v~~L 89 (169)
T 4gpm_A 14 NGNKDRVKDLIENGADVNAS---DSDGRTPLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAENGHKEVVKLL 89 (169)
T ss_dssp TTCHHHHHHHHHTTCCTTCC---CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCCCc---CCCCCCHHHHHHHcCCHHHHHHHHhcccch-hhhccCCCCHHHHHHHcCCHHHHHHH
Confidence 69999999999999986554 899999999999999999999999999998 89999999999999999999999999
Q ss_pred HhhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHH
Q 043760 82 LQVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAV 161 (345)
Q Consensus 82 l~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~ 161 (345)
+++|+++ +.+|.+|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+
T Consensus 90 l~~gadv-n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad------------------------~~~~d~~G~TpL~~A~ 144 (169)
T 4gpm_A 90 ISKGADV-NAKDSDGRTPLHHAAENGHKEVVKLLISKGAD------------------------VNTSDSDGRTPLDLAR 144 (169)
T ss_dssp HHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------------------------TTCCCTTSCCHHHHHH
T ss_pred HHCcCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------------------ccccCCCCCCHHHHHH
Confidence 9999999 89999999999999999999999999999998 8999999999999999
Q ss_pred HcCCHHHHHHhhhcCCccccc
Q 043760 162 ADKQIEAIKFLTTSTAIEVNA 182 (345)
Q Consensus 162 ~~g~~~~v~~Ll~~~~~~~~~ 182 (345)
+.|+.+++++|+++ |++++-
T Consensus 145 ~~g~~~iv~~Ll~~-GA~ie~ 164 (169)
T 4gpm_A 145 EHGNEEVVKLLEKQ-GGWLEH 164 (169)
T ss_dssp HTTCHHHHHHHHTC-------
T ss_pred HcCCHHHHHHHHHC-CCCcCC
Confidence 99999999999999 888864
No 21
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.4e-33 Score=245.78 Aligned_cols=180 Identities=17% Similarity=0.179 Sum_probs=169.0
Q ss_pred CCCHHHHHHHHhcCCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHH
Q 043760 2 AGSVNTLLELRQQDPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKAL 81 (345)
Q Consensus 2 ~g~~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~L 81 (345)
.|+.++|+.|++.+.++... +..|+||||+|+..|+.+++++|++.++..++.++..|.||||+|+..|+.+++++|
T Consensus 67 ~g~~~~v~~Ll~~g~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 143 (253)
T 1yyh_A 67 YSRSDAAKRLLEASADANIQ---DNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDL 143 (253)
T ss_dssp TTCHHHHHHHHHTTCCTTCC---CTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHH
T ss_pred cCCHHHHHHHHHcCCCCCCC---CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHH
Confidence 58999999999999886554 889999999999999999999999999844488999999999999999999999999
Q ss_pred HhhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHH
Q 043760 82 LQVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAV 161 (345)
Q Consensus 82 l~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~ 161 (345)
+++|+++ +..|..|.||||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+
T Consensus 144 l~~g~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~------------------------~~~~~~~g~tpL~~A~ 198 (253)
T 1yyh_A 144 INSHADV-NAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN------------------------KDMQNNREETPLFLAA 198 (253)
T ss_dssp HHTTCCT-TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC------------------------TTCCCTTSCCHHHHHH
T ss_pred HHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------------------CCCcCCCCCCHHHHHH
Confidence 9999999 78999999999999999999999999999998 8899999999999999
Q ss_pred HcCCHHHHHHhhhcCCccccccCCCCCcHHHHHHhcCCCCchhhHHHHHHHcc
Q 043760 162 ADKQIEAIKFLTTSTAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELLRRAG 214 (345)
Q Consensus 162 ~~g~~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~g 214 (345)
..|+.+++++|+++ |++++.+|..|+||+|+|+. .++.+|+++|....
T Consensus 199 ~~~~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~----~g~~~i~~~l~~~~ 246 (253)
T 1yyh_A 199 REGSYETAKVLLDH-FANRDITDHMDRLPRDIAQE----RMHHDIVRLLDLEH 246 (253)
T ss_dssp HHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHH----TTCHHHHHHHHC--
T ss_pred HCCCHHHHHHHHHc-CCCccccccCCCCHHHHHHH----cCCHHHHHHHHHHh
Confidence 99999999999999 99999999999999999999 89999999998543
No 22
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=7.5e-33 Score=238.23 Aligned_cols=204 Identities=24% Similarity=0.194 Sum_probs=179.3
Q ss_pred CCCHHHHHHHHhcCCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHH
Q 043760 2 AGSVNTLLELRQQDPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKAL 81 (345)
Q Consensus 2 ~g~~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~L 81 (345)
.|++++++.|++.+.++... +..|.||||+|+..|+.+++++|++.++++....+..|.||||+|+..|+.+++++|
T Consensus 19 ~g~~~~~~~Ll~~g~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~L 95 (240)
T 3eu9_A 19 YGIYERCRELVEAGYDVRQP---DKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQL 95 (240)
T ss_dssp TTCHHHHHHHHHTTCCTTCC---CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHH
T ss_pred cCChHHHHHHHHcCCCcCCC---CCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHH
Confidence 68999999999999886544 888999999999999999999999999988666667799999999999999999999
Q ss_pred HhhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCcc--------------HHHHHHhcCCccccc
Q 043760 82 LQVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGS--------------TEVLLENMGDFELLN 147 (345)
Q Consensus 82 l~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~--------------~~~l~~~~~~~~~~~ 147 (345)
++.|+++ +..+..|.||||+|+..|+.+++++|++.+++..... ..+.+ ++.|++.+.+ ++
T Consensus 96 l~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~~L~~~~~~---~~ 170 (240)
T 3eu9_A 96 MKYGADP-SLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMD-QNGMTPLMWAAYRTHSVDPTRLLLTFNVS---VN 170 (240)
T ss_dssp HHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHHCCSSTTHHHHHHTTCC---TT
T ss_pred HHcCCCC-cccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccC-CCCCcHHHHHHHhCChHHHHHHHHhcCCC---cc
Confidence 9999999 7889999999999999999999999999988765432 22222 6777777666 77
Q ss_pred ccCC-CCCCHHHHHHHcCCHHHHHHhhhcCCccccccCCCCCcHHHHHHhcCCCCchhhHHHHHHHcccccc
Q 043760 148 AKDD-YGMTILLLAVADKQIEAIKFLTTSTAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELLRRAGAISA 218 (345)
Q Consensus 148 ~~d~-~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga~~~ 218 (345)
..+. .|.||||+|+..|+.+++++|++. |++++.+|..|+||||+|+. .++.+++++|++.|+...
T Consensus 171 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~----~~~~~~v~~L~~~~~~~~ 237 (240)
T 3eu9_A 171 LGDKYHKNTALHWAVLAGNTTVISLLLEA-GANVDAQNIKGESALDLAKQ----RKNVWMINHLQEARQAKG 237 (240)
T ss_dssp CCCTTTCCCHHHHHHHHTCHHHHHHHHHH-TCCTTCBCTTSCBHHHHHHH----TTCHHHHHHHHHHC----
T ss_pred hhhccCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHH----cCcHHHHHHHHHhhhccC
Confidence 7776 899999999999999999999999 89999999999999999999 889999999999998653
No 23
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-34 Score=253.66 Aligned_cols=177 Identities=24% Similarity=0.311 Sum_probs=150.8
Q ss_pred HHHHHHHhcCCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHHHhhC
Q 043760 6 NTLLELRQQDPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKALLQVI 85 (345)
Q Consensus 6 ~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~ 85 (345)
.+++.|++.|.++... |.+|+||||+||..|+.+++++|++.++++ +.++..|.||||+|+..++.+++++|++.|
T Consensus 67 ~~v~~Ll~~Gadvn~~---d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~-~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g 142 (269)
T 4b93_B 67 KRLAKVPASGLGVNVT---SQDGSSPLHVAALHGRADLIPLLLKHGANA-GARNADQAVPLHLACQQGHFQVVKCLLDSN 142 (269)
T ss_dssp --------CCCCTTCC---CTTSCCHHHHHHHTTCTTHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHHHHHHHCCCCCCCc---CCCCCCHHHHHHHcCcHHHHHHHHhcCCCc-CccCCCCCCccccccccChHHHHHHHHHCC
Confidence 4678899999886544 889999999999999999999999999998 888999999999999999999999999999
Q ss_pred CCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHHHcCC
Q 043760 86 PDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAVADKQ 165 (345)
Q Consensus 86 ~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~ 165 (345)
+++ +..|..|+||||+|+..|+.+++++|++.|++ +|.+|..|+||||+|+..|+
T Consensus 143 ~~~-n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gad------------------------vn~~~~~g~t~Lh~A~~~g~ 197 (269)
T 4b93_B 143 AKP-NKKDLSGNTPLIYACSGGHHELVALLLQHGAS------------------------INASNNKGNTALHEAVIEKH 197 (269)
T ss_dssp CCS-CCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCC------------------------TTCBCTTSCBHHHHHHHTTC
T ss_pred CCC-CCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC------------------------CCccccCCCcHHHHHHHcCC
Confidence 999 88999999999999999999999999999998 89999999999999999999
Q ss_pred HHHHHHhhhcCCccccccCCCCCcHHHHHHhcCCCCch-hhHHHHHHHcccc
Q 043760 166 IEAIKFLTTSTAIEVNAVTANGFTAWDILAQSKRDIKD-WDTGELLRRAGAI 216 (345)
Q Consensus 166 ~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~-~~i~~~L~~~ga~ 216 (345)
.+++++|++. |+|++.+|..|+||||+|++ .++ .++.++|...++.
T Consensus 198 ~~~v~~Ll~~-Gad~~~~d~~G~TpL~~A~~----~~~i~~lL~~l~~~~~~ 244 (269)
T 4b93_B 198 VFVVELLLLH-GASVQVLNKRQRTAVDCAEQ----NSKIMELLQVVPSCVAS 244 (269)
T ss_dssp HHHHHHHHHT-TCCSCCCCTTSCCSGGGSCT----TCHHHHHTTC-------
T ss_pred HHHHHHHHHC-CCCCCCcCCCCCCHHHHHHh----CCcHHHHHHHHHHhchh
Confidence 9999999999 99999999999999999987 443 3444444444543
No 24
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=9.9e-34 Score=252.46 Aligned_cols=217 Identities=19% Similarity=0.170 Sum_probs=172.8
Q ss_pred CCCHHHHHHHHhcCCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHH
Q 043760 2 AGSVNTLLELRQQDPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKAL 81 (345)
Q Consensus 2 ~g~~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~L 81 (345)
.|++++|+.|++.+.++... |..|.||||+||..|+.+++++|++.|+++ +.+|..|.||||+|+..|+.+++++|
T Consensus 50 ~g~~~~v~~Ll~~g~~~~~~---~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~~g~~~~v~~L 125 (299)
T 1s70_B 50 SGDTEEVLRLLERGADINYA---NVDGLTALHQACIDDNVDMVKFLVENGANI-NQPDNEGWIPLHAAASCGYLDIAEYL 125 (299)
T ss_dssp HTCHHHHHHHHHHCCCTTCB---CTTCCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCCccc---CCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcCCHHHHHHH
Confidence 48899999999998875543 788999999999999999999999999887 88889999999999999999999999
Q ss_pred HhhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCcc-----HHHHHHhcCCcccccccCCCCCCH
Q 043760 82 LQVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGS-----TEVLLENMGDFELLNAKDDYGMTI 156 (345)
Q Consensus 82 l~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~-----~~~l~~~~~~~~~~~~~d~~g~t~ 156 (345)
+++|+++ +..+..|.||||+|+..++.+++++++................ +..++..... .....+..|.||
T Consensus 126 l~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~g~t~ 202 (299)
T 1s70_B 126 ISQGAHV-GAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHI--NDVRHAKSGGTA 202 (299)
T ss_dssp HHTTCCT-TCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCC--CCCCCTTTCCCH
T ss_pred HhCCCCC-CCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCc--chhhhcCCCCCH
Confidence 9999988 7888899999999999999999988876533221111111100 2222222221 134567889999
Q ss_pred HHHHHHcCCHHHHHHhhhcCCccccccCCCCCcHHHHHHhcCCCCchhhHHHHHHHcccccccccCCccchhhh
Q 043760 157 LLLAVADKQIEAIKFLTTSTAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELLRRAGAISAKDLQLPVNELAV 230 (345)
Q Consensus 157 Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga~~~~~~~~~~~~~~~ 230 (345)
||+|+..|+.+++++|++. |++++.+|..|+||||+|+. .++.+++++|++.|+++.........++..
T Consensus 203 L~~A~~~g~~~~v~~Ll~~-g~d~~~~d~~g~tpL~~A~~----~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~ 271 (299)
T 1s70_B 203 LHVAAAKGYTEVLKLLIQA-RYDVNIKDYDGWTPLHAAAH----WGKEEACRILVENLCDMEAVNKVGQTAFDV 271 (299)
T ss_dssp HHHHHHHTCHHHHHHHHTT-TCCTTCCCTTCCCHHHHHHH----TTCHHHHHHHHHTTCCTTCCCTTSCCTTTS
T ss_pred HHHHHHCCcHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHh----cCCHHHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence 9999999999999999998 89999999999999999999 889999999999999886644444444333
No 25
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=5.3e-34 Score=248.82 Aligned_cols=188 Identities=24% Similarity=0.194 Sum_probs=165.1
Q ss_pred CCCHH----HHHHHHhcCCccccC-CCCCCCCCcHHHHHHHc---CCHHHHHHHhcCCCCccc----------ccCCCCc
Q 043760 2 AGSVN----TLLELRQQDPLILER-PTVNCLSETPLHVAALL---GHEDFAKEILPQKPRIAE----------ELDSRKS 63 (345)
Q Consensus 2 ~g~~~----~v~~ll~~~~~~~~~-~~~~~~g~t~Lh~Aa~~---g~~~~v~~Ll~~~~~~~~----------~~d~~g~ 63 (345)
.|+.+ +++.|++.+.++... ...|..|+||||+|+.. |+.+++++|++.+++... ..|..|.
T Consensus 12 ~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~ 91 (256)
T 2etb_A 12 RGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGH 91 (256)
T ss_dssp HTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTC
T ss_pred cCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCC
Confidence 46776 556666788776540 01388999999999999 999999999998776511 2347899
Q ss_pred hHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCC-------------CCcHHHHHHHcCcHHHHHHHHh---cCCCcccccc
Q 043760 64 SALHIASQKGYVGIVKALLQVIPDKCSDTDVD-------------GRNPLHLAAMRGHIDVLEELVR---AKPDAASTRL 127 (345)
Q Consensus 64 tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~-------------g~tpLh~A~~~g~~~iv~~Ll~---~~~~~~~~~~ 127 (345)
||||+|+..|+.+++++|+++|+++ +..+.. |.||||+|+..|+.+++++|++ .|++
T Consensus 92 t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~------ 164 (256)
T 2etb_A 92 SALHIAIEKRSLQCVKLLVENGADV-HLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPAS------ 164 (256)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC------
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCC-CcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC------
Confidence 9999999999999999999999999 677765 9999999999999999999999 8888
Q ss_pred cCCccHHHHHHhcCCcccccccCCCCCCHHHHHHH--cCCHH-------HHHHhhhcCCccc-------cccCCCCCcHH
Q 043760 128 IWVGSTEVLLENMGDFELLNAKDDYGMTILLLAVA--DKQIE-------AIKFLTTSTAIEV-------NAVTANGFTAW 191 (345)
Q Consensus 128 ~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~--~g~~~-------~v~~Ll~~~~~~~-------~~~n~~g~T~L 191 (345)
++.+|..|+||||+|+. .++.+ ++++|++. |+++ +.+|..|+|||
T Consensus 165 ------------------~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~-ga~~~~~~~~~~~~d~~g~tpL 225 (256)
T 2etb_A 165 ------------------LEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQM-GARLCPTVQLEEISNHQGLTPL 225 (256)
T ss_dssp ------------------TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHH-HHHHSTTCCGGGCCCTTSCCHH
T ss_pred ------------------cCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHc-CCCcccccccccccCCCCCCHH
Confidence 89999999999999999 88888 99999999 8999 99999999999
Q ss_pred HHHHhcCCCCchhhHHHHHHHccccccc
Q 043760 192 DILAQSKRDIKDWDTGELLRRAGAISAK 219 (345)
Q Consensus 192 ~~a~~~~~~~~~~~i~~~L~~~ga~~~~ 219 (345)
|+|+. .++.+++++|+++|++...
T Consensus 226 ~~A~~----~g~~~~v~~Ll~~g~~~~~ 249 (256)
T 2etb_A 226 KLAAK----EGKIEIFRHILQREFSGAA 249 (256)
T ss_dssp HHHHH----TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHH----hCCHHHHHHHHhCCCCCCC
Confidence 99999 8899999999999997754
No 26
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=2.7e-33 Score=233.73 Aligned_cols=160 Identities=23% Similarity=0.282 Sum_probs=154.1
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHHHH
Q 043760 24 VNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLHLA 103 (345)
Q Consensus 24 ~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A 103 (345)
+|..|+||||+|+..|+.+++++|++.+.++ +.+|..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|
T Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A 108 (192)
T 2rfm_A 31 RDSYNRTPLMVACMLGMENAIDKLVENFDKL-EDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV-NTKDFSGKTPLMWS 108 (192)
T ss_dssp CCTTCCCHHHHHHHHTCGGGHHHHHHHHCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHhcccc-ccccccCccHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHH
Confidence 4888999999999999999999999999987 888999999999999999999999999999998 78999999999999
Q ss_pred HHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhcCCcccccc
Q 043760 104 AMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTSTAIEVNAV 183 (345)
Q Consensus 104 ~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~ 183 (345)
+..|+.+++++|++.+++ ++.+|..|.||||+|+..|+.+++++|++. |++++.+
T Consensus 109 ~~~~~~~~v~~Ll~~g~~------------------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~ 163 (192)
T 2rfm_A 109 IIFGYSEMSYFLLEHGAN------------------------VNDRNLEGETPLIVASKYGRSEIVKKLLEL-GADISAR 163 (192)
T ss_dssp HHHTCHHHHHHHHHTTCC------------------------SSCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCTTCB
T ss_pred HHcCCHHHHHHHHHCCCC------------------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCc
Confidence 999999999999999998 899999999999999999999999999999 9999999
Q ss_pred CCCCCcHHHHHHhcCCCCchhhHHHHHHHcc
Q 043760 184 TANGFTAWDILAQSKRDIKDWDTGELLRRAG 214 (345)
Q Consensus 184 n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~g 214 (345)
|..|.||||+|+. .++.+++++|++.|
T Consensus 164 ~~~g~t~l~~A~~----~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 164 DLTGLTAEASARI----FGRQEVIKIFTEVR 190 (192)
T ss_dssp CTTSCBHHHHHHH----TTCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHH----hCcHHHHHHHHhcc
Confidence 9999999999999 88999999999875
No 27
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=3.7e-33 Score=255.95 Aligned_cols=204 Identities=15% Similarity=0.093 Sum_probs=174.1
Q ss_pred CCCHHHHHHHHhcCCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHH
Q 043760 2 AGSVNTLLELRQQDPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKAL 81 (345)
Q Consensus 2 ~g~~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~L 81 (345)
.|++++|+.|++.+.++... |..|.||||+||..|+.+++++|++.+++. .+..|.||||+|+..|+.+++++|
T Consensus 30 ~g~~~~v~~Ll~~g~~~~~~---d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~g~t~L~~A~~~g~~~~v~~L 103 (364)
T 3ljn_A 30 KGQTDEVRRLIETGVSPTIQ---NRFGCTALHLACKFGCVDTAKYLASVGEVH---SLWHGQKPIHLAVMANKTDLVVAL 103 (364)
T ss_dssp HTCHHHHHHHHHTTCCTTCC---CTTCCCHHHHHHHHCCHHHHHHHHHHCCCC---CCBTTBCHHHHHHHTTCHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCcccc---CCCCCcHHHHHHHcCCHHHHHHHHHCCCCc---cccCCCCHHHHHHHcCCHHHHHHH
Confidence 48999999999999886544 889999999999999999999999999855 235789999999999999999999
Q ss_pred Hhh----CCCCCcC-----------------CCCCCCcHHHHHHHcC--cHHHHHHHHhcCCCcccccccCCcc------
Q 043760 82 LQV----IPDKCSD-----------------TDVDGRNPLHLAAMRG--HIDVLEELVRAKPDAASTRLIWVGS------ 132 (345)
Q Consensus 82 l~~----~~~~~~~-----------------~d~~g~tpLh~A~~~g--~~~iv~~Ll~~~~~~~~~~~~~~~~------ 132 (345)
++. +.++ +. .|..|.||||+|+..| +.+++++|++.|++.... +..+.+
T Consensus 104 l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~-d~~g~t~L~~A~ 181 (364)
T 3ljn_A 104 VEGAKERGQMP-ESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAK-DKADETPLMRAM 181 (364)
T ss_dssp HHHHHHHTCCH-HHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCC-CTTSCCHHHHHH
T ss_pred HHhccccCCCH-HHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCccc-CCCCCCHHHHHH
Confidence 988 6665 34 6778999999999999 899999999998876443 333433
Q ss_pred -------HHHHHHhcCC--cccccccCCCCCCHHHHHHHcCCHHHHHHhhhcCCccccccCCCCCcHHHHHHhcCCCCch
Q 043760 133 -------TEVLLENMGD--FELLNAKDDYGMTILLLAVADKQIEAIKFLTTSTAIEVNAVTANGFTAWDILAQSKRDIKD 203 (345)
Q Consensus 133 -------~~~l~~~~~~--~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~ 203 (345)
+++|++.+.+ ...++.+|..|+||||+|+..|+.+++++|+++ |++++.+|..|+||||+|+. .++
T Consensus 182 ~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-gad~~~~d~~g~tpL~~A~~----~g~ 256 (364)
T 3ljn_A 182 EFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEM-GIDVNMEDNEHTVPLYLSVR----AAM 256 (364)
T ss_dssp HTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTT-TCCTTCCCTTSCCHHHHHHH----TCC
T ss_pred HcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHH----hCh
Confidence 6777776544 223788899999999999999999999999998 99999999999999999999 889
Q ss_pred hhHHHHHHHcccccc
Q 043760 204 WDTGELLRRAGAISA 218 (345)
Q Consensus 204 ~~i~~~L~~~ga~~~ 218 (345)
.+++++|++.|++..
T Consensus 257 ~~~v~~Ll~~~~~~~ 271 (364)
T 3ljn_A 257 VLLTKELLQKTDVFL 271 (364)
T ss_dssp HHHHHHHHHHSCHHH
T ss_pred HHHHHHHHHcCCchh
Confidence 999999999999763
No 28
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2e-32 Score=257.14 Aligned_cols=203 Identities=28% Similarity=0.296 Sum_probs=130.7
Q ss_pred CCHHHHHHHHhcCCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHHH
Q 043760 3 GSVNTLLELRQQDPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKALL 82 (345)
Q Consensus 3 g~~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll 82 (345)
|+.++++.|++.+.++... +..|.||||+|+..|+.+++++|++++.++ +..+..|.||||+|+..|+.+++++|+
T Consensus 157 g~~~~v~~Ll~~g~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll 232 (437)
T 1n11_A 157 GKVRVAELLLERDAHPNAA---GKNGLTPLHVAVHHNNLDIVKLLLPRGGSP-HSPAWNGYTPLHIAAKQNQVEVARSLL 232 (437)
T ss_dssp TCHHHHHHHHHTTCCTTCC---CSSCCCHHHHHHHTTCHHHHHHHGGGTCCS-CCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred CCHHHHHHHHhCCCCCCCC---CCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 5556666666655553322 555666666666666666666666666555 555566666666666666666666666
Q ss_pred hhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCcc-------------HHHHHHhcCCccccccc
Q 043760 83 QVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGS-------------TEVLLENMGDFELLNAK 149 (345)
Q Consensus 83 ~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~-------------~~~l~~~~~~~~~~~~~ 149 (345)
+.|+++ +..+..|.||||+|+..|+.+++++|++.+++.... +..+.+ ++.|++.+.+ ++.+
T Consensus 233 ~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~ 307 (437)
T 1n11_A 233 QYGGSA-NAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLG-NKSGLTPLHLVAQEGHVPVADVLIKHGVM---VDAT 307 (437)
T ss_dssp HTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCC-CTTCCCHHHHHHHHTCHHHHHHHHHHTCC---TTCC
T ss_pred HcCCCC-CCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhCCcc---CCCC
Confidence 666665 556666666666666666666666666666554322 222222 5556665554 6677
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHhhhcCCccccccCCCCCcHHHHHHhcCCCCchhhHHHHHHHccccccc
Q 043760 150 DDYGMTILLLAVADKQIEAIKFLTTSTAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELLRRAGAISAK 219 (345)
Q Consensus 150 d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga~~~~ 219 (345)
|..|+||||+|+..|+.+++++|+++ |+++|.+|..|+||||+|+. .++.+++++|++.|+++..
T Consensus 308 ~~~g~t~L~~A~~~g~~~~v~~Ll~~-gad~n~~~~~g~t~L~~A~~----~g~~~iv~~Ll~~ga~~~~ 372 (437)
T 1n11_A 308 TRMGYTPLHVASHYGNIKLVKFLLQH-QADVNAKTKLGYSPLHQAAQ----QGHTDIVTLLLKNGASPNE 372 (437)
T ss_dssp CSSCCCHHHHHHHSSCSHHHHHHHHT-TCCTTCCCTTSCCHHHHHHH----TTCHHHHHHHHHTTCCSCC
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHhc-CCCCCCCCCCCCCHHHHHHH----CChHHHHHHHHHCcCCCCC
Confidence 77777777777777777777777777 77777777777777777777 6677777777777776654
No 29
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=5.5e-33 Score=227.63 Aligned_cols=162 Identities=22% Similarity=0.243 Sum_probs=154.1
Q ss_pred CCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHHcC
Q 043760 28 SETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLHLAAMRG 107 (345)
Q Consensus 28 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g 107 (345)
+.||||.|+..|+.+++++|++.++..++.+|..|+||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~ 80 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADP-HILAKERESALSLASTGG 80 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-hhhcccCCCHHHHHHHCC
Confidence 5789999999999999999999999866999999999999999999999999999999999 789999999999999999
Q ss_pred cHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhcCCccccccCCCC
Q 043760 108 HIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTSTAIEVNAVTANG 187 (345)
Q Consensus 108 ~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~g 187 (345)
+.+++++|++.+++ ++.+|..|+||||+|+..|+.+++++|++. |++++.+|..|
T Consensus 81 ~~~~v~~Ll~~g~~------------------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g 135 (172)
T 3v30_A 81 YTDIVGLLLERDVD------------------------INIYDWNGGTPLLYAVRGNHVKCVEALLAR-GADLTTEADSG 135 (172)
T ss_dssp CHHHHHHHHTTTCC------------------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTS
T ss_pred CHHHHHHHHHcCCC------------------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCccccCCCC
Confidence 99999999999988 899999999999999999999999999999 89999999999
Q ss_pred CcHHHHHHhcCCCCchhhHHHHHHHccccccc
Q 043760 188 FTAWDILAQSKRDIKDWDTGELLRRAGAISAK 219 (345)
Q Consensus 188 ~T~L~~a~~~~~~~~~~~i~~~L~~~ga~~~~ 219 (345)
+||||+|+. .++.+++++|++.|++...
T Consensus 136 ~t~l~~A~~----~~~~~~~~~L~~~~~~~~~ 163 (172)
T 3v30_A 136 YTPMDLAVA----LGYRKVQQVIENHILKLFQ 163 (172)
T ss_dssp CCHHHHHHH----HTCHHHHHHHHHHHHHHSC
T ss_pred CCHHHHHHH----hCcHHHHHHHHHHHHHHhc
Confidence 999999999 7889999999999998754
No 30
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=6e-33 Score=226.30 Aligned_cols=162 Identities=22% Similarity=0.248 Sum_probs=155.0
Q ss_pred CCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHHc
Q 043760 27 LSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLHLAAMR 106 (345)
Q Consensus 27 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~ 106 (345)
.|.||||.|+..|+.+++++|++.+.++ +.+|..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 79 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVI-NHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP-QLLGKGRESALSLACSK 79 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCc-CCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHc
Confidence 5899999999999999999999999887 889999999999999999999999999999999 78899999999999999
Q ss_pred CcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhcCCccccccCCC
Q 043760 107 GHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTSTAIEVNAVTAN 186 (345)
Q Consensus 107 g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~ 186 (345)
|+.+++++|++.+++ ++.+|..|.||||+|+..|+.+++++|++. |++++.+|..
T Consensus 80 ~~~~~v~~Ll~~g~~------------------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~ 134 (167)
T 3v31_A 80 GYTDIVKMLLDCGVD------------------------VNEYDWNGGTPLLYAVHGNHVKCVKMLLES-GADPTIETDS 134 (167)
T ss_dssp TCHHHHHHHHHHTCC------------------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTT
T ss_pred CCHHHHHHHHHCCCC------------------------CCcCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCC
Confidence 999999999999988 889999999999999999999999999998 9999999999
Q ss_pred CCcHHHHHHhcCCCCchhhHHHHHHHccccccc
Q 043760 187 GFTAWDILAQSKRDIKDWDTGELLRRAGAISAK 219 (345)
Q Consensus 187 g~T~L~~a~~~~~~~~~~~i~~~L~~~ga~~~~ 219 (345)
|+||||+|+. .++.+++++|++++++...
T Consensus 135 g~t~l~~A~~----~~~~~~~~~L~~~~~~~~~ 163 (167)
T 3v31_A 135 GYNSMDLAVA----LGYRSVQQVIESHLLKLLQ 163 (167)
T ss_dssp SCCHHHHHHH----HTCHHHHHHHHHHHHHHCS
T ss_pred CCCHHHHHHH----cCcHHHHHHHHHHHHHHHH
Confidence 9999999999 8899999999999987644
No 31
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=100.00 E-value=6.9e-33 Score=224.60 Aligned_cols=158 Identities=23% Similarity=0.263 Sum_probs=149.1
Q ss_pred CCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHHc
Q 043760 27 LSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLHLAAMR 106 (345)
Q Consensus 27 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~ 106 (345)
...||||.|+..|+.+++++|++.+.++ +.+|..|+||||+|+. |+.+++++|+++|+++ +..|..|.||||+|+..
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 80 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNV-NAQNGFGRTALQVMKL-GNPEIARRLLLRGANP-DLKDRTGFAVIHDAARA 80 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCT-TCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHH
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCc-cccCccCccHHHHHHc-CcHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHc
Confidence 4679999999999999999999999998 8899999999999999 9999999999999999 78999999999999999
Q ss_pred CcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhcCCcc-ccccCC
Q 043760 107 GHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTSTAIE-VNAVTA 185 (345)
Q Consensus 107 g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~-~~~~n~ 185 (345)
|+.+++++|++.+++ ++.+|..|+||||+|+..|+.+++++|++. |++ ++.+|.
T Consensus 81 ~~~~~v~~Ll~~g~~------------------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~ 135 (162)
T 1ihb_A 81 GFLDTLQTLLEFQAD------------------------VNIEDNEGNLPLHLAAKEGHLRVVEFLVKH-TASNVGHRNH 135 (162)
T ss_dssp TCHHHHHHHHHTTCC------------------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-SCCCTTCCCT
T ss_pred CCHHHHHHHHHcCCC------------------------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHc-cCCCCCCcCC
Confidence 999999999999988 899999999999999999999999999999 666 799999
Q ss_pred CCCcHHHHHHhcCCCCchhhHHHHHHHcccc
Q 043760 186 NGFTAWDILAQSKRDIKDWDTGELLRRAGAI 216 (345)
Q Consensus 186 ~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga~ 216 (345)
.|.||||+|+. .++.+++++|+++||+
T Consensus 136 ~g~t~l~~A~~----~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 136 KGDTACDLARL----YGRNEVVSLMQANGAG 162 (162)
T ss_dssp TSCCHHHHHHH----TTCHHHHHHHHHTC--
T ss_pred CCCcHHHHHHH----cCCHHHHHHHHHhCCC
Confidence 99999999999 8899999999999985
No 32
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=3.7e-33 Score=240.75 Aligned_cols=180 Identities=17% Similarity=0.135 Sum_probs=163.9
Q ss_pred CCCHHHHHHHHhcCCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCC----CcccccCCCCchHHHHHHHcCCHHH
Q 043760 2 AGSVNTLLELRQQDPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQKP----RIAEELDSRKSSALHIASQKGYVGI 77 (345)
Q Consensus 2 ~g~~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~----~~~~~~d~~g~tpLh~A~~~g~~~i 77 (345)
.|+.++++.|++.+.++... +..|.||||+|+..|+.+++++|++.++ ++ +..|..|.||||+|+..|+.++
T Consensus 56 ~~~~~~v~~Ll~~g~~~~~~---~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~ 131 (241)
T 1k1a_A 56 TTLPSVVRLLVTAGASPMAL---DRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDL-EARNYDGLTALHVAVNTECQET 131 (241)
T ss_dssp TTCHHHHHHHHHTTCCTTCC---CTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCT-TCCCTTSCCHHHHHHHHTCHHH
T ss_pred cCCHHHHHHHHHcCCCcccc---CCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccc-cccCcCCCcHHHHHHHcCCHHH
Confidence 58999999999999886554 8899999999999999999999999987 55 7889999999999999999999
Q ss_pred HHHHHhhCCCCCcCCC-CCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCH
Q 043760 78 VKALLQVIPDKCSDTD-VDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTI 156 (345)
Q Consensus 78 v~~Ll~~~~~~~~~~d-~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~ 156 (345)
+++|+++|+++ +..+ ..|.||||+|+..|+.+++++|++.|++ ++.+|..|+||
T Consensus 132 ~~~Ll~~g~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------------------~~~~~~~g~t~ 186 (241)
T 1k1a_A 132 VQLLLERGADI-DAVDIKSGRSPLIHAVENNSLSMVQLLLQHGAN------------------------VNAQMYSGSSA 186 (241)
T ss_dssp HHHHHHTTCCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC------------------------TTCBCTTSCBH
T ss_pred HHHHHHcCCCc-ccccccCCCcHHHHHHHcCCHHHHHHHHHcCCC------------------------CCCcCCCCCCH
Confidence 99999999999 5666 8899999999999999999999999998 89999999999
Q ss_pred HHHHHHcCCHHHHHHhhhcCCccccccCCCCCcHHHHHHhcCCCCchhhHHHHHHHccc
Q 043760 157 LLLAVADKQIEAIKFLTTSTAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELLRRAGA 215 (345)
Q Consensus 157 Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga 215 (345)
||+|+..|+.+++++|++. |++++.+|..|+||||+|+. .++.++++.|.+.++
T Consensus 187 L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpl~~A~~----~~~~~i~~~l~~~~a 240 (241)
T 1k1a_A 187 LHSASGRGLLPLVRTLVRS-GADSSLKNCHNDTPLMVARS----RRVIDILRGKATRPA 240 (241)
T ss_dssp HHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCTTTTCSS----HHHHHHHTC------
T ss_pred HHHHHHcCCHHHHHHHHhc-CCCCCCcCCCCCCHHHHHHh----cCcHHHHhhhccCCC
Confidence 9999999999999999998 99999999999999999999 889999999988765
No 33
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=1.2e-32 Score=225.05 Aligned_cols=159 Identities=30% Similarity=0.385 Sum_probs=151.0
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHHHHH
Q 043760 25 NCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLHLAA 104 (345)
Q Consensus 25 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~ 104 (345)
...+.++||.||..|+.+++++|++.+.++ +.+|..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~ 88 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGADV-NAEDASGWTPLHLAAFNGHLEIVEVLLKNGADV-NAVDHAGMTPLRLAA 88 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHH
Confidence 667899999999999999999999999998 889999999999999999999999999999998 789999999999999
Q ss_pred HcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhcCCccccccC
Q 043760 105 MRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTSTAIEVNAVT 184 (345)
Q Consensus 105 ~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n 184 (345)
..|+.+++++|++.+++ ++.+|..|.||||+|+..|+.+++++|+++ |++++.+|
T Consensus 89 ~~~~~~~~~~Ll~~g~~------------------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~ 143 (169)
T 2y1l_E 89 LFGHLEIVEVLLKNGAD------------------------VNANDMEGHTPLHLAAMFGHLEIVEVLLKN-GADVNAQD 143 (169)
T ss_dssp HTTCHHHHHHHHHTTCC------------------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCC
T ss_pred HcCCHHHHHHHHHcCCC------------------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcC
Confidence 99999999999999988 889999999999999999999999999999 99999999
Q ss_pred CCCCcHHHHHHhcCCCCchhhHHHHHHHcc
Q 043760 185 ANGFTAWDILAQSKRDIKDWDTGELLRRAG 214 (345)
Q Consensus 185 ~~g~T~L~~a~~~~~~~~~~~i~~~L~~~g 214 (345)
..|.||||+|+. .++.+++++|++.|
T Consensus 144 ~~g~t~l~~A~~----~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 144 KFGKTAFDISID----NGNEDLAEILQKLN 169 (169)
T ss_dssp TTSCCHHHHHHH----TTCHHHHHHHHTC-
T ss_pred CCCCCHHHHHHH----hCCHHHHHHHHHcC
Confidence 999999999999 88999999999876
No 34
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=7.9e-33 Score=254.78 Aligned_cols=194 Identities=19% Similarity=0.244 Sum_probs=149.0
Q ss_pred HHHhcCCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHHHhhC---C
Q 043760 10 ELRQQDPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKALLQVI---P 86 (345)
Q Consensus 10 ~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~---~ 86 (345)
.|++.+.++... |..|.||||+|+..|+.+++++|++.|+++ +.+|..|.||||+|+..|+.+++++|++++ .
T Consensus 151 ~ll~~ga~vn~~---d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~ 226 (373)
T 2fo1_E 151 ECIAAGADVNAM---DCDENTPLMLAVLARRRRLVAYLMKAGADP-TIYNKSERSALHQAAANRDFGMMVYMLNSTKLKG 226 (373)
T ss_dssp HHHHTCCCTTCC---CTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHH
T ss_pred HHHhcCCCCcCC---CCCCCCHHHHHHHcChHHHHHHHHHCCCCC-cccCCCCCCHHHHHHHCCCHHHHHHHHhcCcccc
Confidence 344788776544 889999999999999999999999999998 889999999999999999999999999987 6
Q ss_pred CCCcCCCCCCCcHHHHHHHcC---cHHHHHHHHhcCCCcccc-------cccCCcc-------------HHHHHHhc-CC
Q 043760 87 DKCSDTDVDGRNPLHLAAMRG---HIDVLEELVRAKPDAAST-------RLIWVGS-------------TEVLLENM-GD 142 (345)
Q Consensus 87 ~~~~~~d~~g~tpLh~A~~~g---~~~iv~~Ll~~~~~~~~~-------~~~~~~~-------------~~~l~~~~-~~ 142 (345)
++ +..|..|.||||+|+..+ +.+++++|++.+++.... .+..+.+ +++|++.. .+
T Consensus 227 ~~-~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~ 305 (373)
T 2fo1_E 227 DI-EELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSN 305 (373)
T ss_dssp TT-SCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCC
T ss_pred Ch-hhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCC
Confidence 77 788999999999999998 899999999999886432 1112222 55555543 33
Q ss_pred cccccccCCCCCCHHHHHHHcCCHHHHHHhhhcCCccccccCCCCCcHHHHHHhcCCCCchhhHHHHHHHcccc
Q 043760 143 FELLNAKDDYGMTILLLAVADKQIEAIKFLTTSTAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELLRRAGAI 216 (345)
Q Consensus 143 ~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga~ 216 (345)
++.+|..|+||||+|+..|+.+++++|+++ |++++.+|..|+||||+|+. .++.+++++|++.|++
T Consensus 306 ---~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~-gad~~~~d~~g~t~l~~A~~----~g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 306 ---KDKQDEDGKTPIMLAAQEGRIEVVMYLIQQ-GASVEAVDATDHTARQLAQA----NNHHNIVDIFDRCRPE 371 (373)
T ss_dssp ---TTCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCSSCCCSSSCCHHHHHHH----TTCHHHHHHHHTTC--
T ss_pred ---ccCcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCccCCCCCCCCHHHHHHH----cCCHHHHHHHHhcCcc
Confidence 666666666666666666666666666666 66666666666666666666 5666666666666654
No 35
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=1.7e-33 Score=246.10 Aligned_cols=188 Identities=21% Similarity=0.206 Sum_probs=163.3
Q ss_pred CCCHHHHHHHHh----cCCccccCC-CCCCCCCcHHHHHH---HcCCHHHHHHHhcCCCCc----------ccccCCCCc
Q 043760 2 AGSVNTLLELRQ----QDPLILERP-TVNCLSETPLHVAA---LLGHEDFAKEILPQKPRI----------AEELDSRKS 63 (345)
Q Consensus 2 ~g~~~~v~~ll~----~~~~~~~~~-~~~~~g~t~Lh~Aa---~~g~~~~v~~Ll~~~~~~----------~~~~d~~g~ 63 (345)
.|+.+.|+.|++ .+.++.... ..+..|+||||+|+ ..|+.+++++|++.+++. ....|..|+
T Consensus 15 ~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~ 94 (260)
T 3jxi_A 15 RGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQ 94 (260)
T ss_dssp HTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESB
T ss_pred hCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCC
Confidence 478886555555 777665432 12477999999999 679999999999986432 144556899
Q ss_pred hHHHHHHHcCCHHHHHHHHhhCCCCCcCCC--------------CCCCcHHHHHHHcCcHHHHHHHHh---cCCCccccc
Q 043760 64 SALHIASQKGYVGIVKALLQVIPDKCSDTD--------------VDGRNPLHLAAMRGHIDVLEELVR---AKPDAASTR 126 (345)
Q Consensus 64 tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d--------------~~g~tpLh~A~~~g~~~iv~~Ll~---~~~~~~~~~ 126 (345)
||||+|+..|+.+++++|+++|+++ +..+ ..|.||||+|+..|+.+++++|++ .|++
T Consensus 95 t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~----- 168 (260)
T 3jxi_A 95 TALHIAIERRCKHYVELLVEKGADV-HAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQAD----- 168 (260)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCT-TCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC-----
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCc-CccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC-----
Confidence 9999999999999999999999999 6777 689999999999999999999999 8888
Q ss_pred ccCCccHHHHHHhcCCcccccccCCCCCCHHHHHHHcCC---------HHHHHHhhhcCCccc-------cccCCCCCcH
Q 043760 127 LIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAVADKQ---------IEAIKFLTTSTAIEV-------NAVTANGFTA 190 (345)
Q Consensus 127 ~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~---------~~~v~~Ll~~~~~~~-------~~~n~~g~T~ 190 (345)
++.+|..|+||||+|+..++ .+++++|++. |+++ +.+|..|+||
T Consensus 169 -------------------~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~-ga~~~~~~~~~~~~d~~g~tp 228 (260)
T 3jxi_A 169 -------------------LRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIK-CAKLFPDTNLEALLNNDGLSP 228 (260)
T ss_dssp -------------------TTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHH-HHHHCTTCCGGGCCCTTSCCH
T ss_pred -------------------CcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHh-CcccccccchhhcccCCCCCH
Confidence 89999999999999999888 7999999999 8898 7899999999
Q ss_pred HHHHHhcCCCCchhhHHHHHHHccccccc
Q 043760 191 WDILAQSKRDIKDWDTGELLRRAGAISAK 219 (345)
Q Consensus 191 L~~a~~~~~~~~~~~i~~~L~~~ga~~~~ 219 (345)
||+|+. .++.+++++|+++|++...
T Consensus 229 L~~A~~----~g~~~~v~~Ll~~g~~~~~ 253 (260)
T 3jxi_A 229 LMMAAK----TGKIGIFQHIIRREIADAA 253 (260)
T ss_dssp HHHHHH----TTCHHHHHHHHHHHHHHHC
T ss_pred HHHHHH----cCCHHHHHHHHHhCCCccc
Confidence 999999 8999999999999997754
No 36
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=2.1e-33 Score=247.45 Aligned_cols=185 Identities=18% Similarity=0.188 Sum_probs=161.5
Q ss_pred CCCHHHHHHHHh----cCCccccCC-CCCCCCCcHHHHHHHc---CCHHHHHHHhcCCCCc------cc----ccCCCCc
Q 043760 2 AGSVNTLLELRQ----QDPLILERP-TVNCLSETPLHVAALL---GHEDFAKEILPQKPRI------AE----ELDSRKS 63 (345)
Q Consensus 2 ~g~~~~v~~ll~----~~~~~~~~~-~~~~~g~t~Lh~Aa~~---g~~~~v~~Ll~~~~~~------~~----~~d~~g~ 63 (345)
.|++++|+.|++ .+..+.... ..+..|+||||+|+.. |+.+++++|++.+++. ++ ..|..|.
T Consensus 23 ~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~ 102 (273)
T 2pnn_A 23 QSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQ 102 (273)
T ss_dssp TTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTC
T ss_pred cCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCC
Confidence 588888888887 344332110 2378899999999987 9999999999987542 12 2567999
Q ss_pred hHHHHHHHcCCHHHHHHHHhhCCCCCcCCCC--------------CCCcHHHHHHHcCcHHHHHHHHh---cCCCccccc
Q 043760 64 SALHIASQKGYVGIVKALLQVIPDKCSDTDV--------------DGRNPLHLAAMRGHIDVLEELVR---AKPDAASTR 126 (345)
Q Consensus 64 tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~--------------~g~tpLh~A~~~g~~~iv~~Ll~---~~~~~~~~~ 126 (345)
||||+|+..|+.+++++|+++|+++ +..+. .|.||||+|+..|+.+++++|++ .|++
T Consensus 103 tpL~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad----- 176 (273)
T 2pnn_A 103 TALHIAIERRNMTLVTLLVENGADV-QAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPAD----- 176 (273)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCT-TCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCC-----
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCc-CccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCC-----
Confidence 9999999999999999999999999 67776 79999999999999999999999 8888
Q ss_pred ccCCccHHHHHHhcCCcccccccCCCCCCHHHHHHHcCC---------HHHHHHhhhcCCcccc-------ccCCCCCcH
Q 043760 127 LIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAVADKQ---------IEAIKFLTTSTAIEVN-------AVTANGFTA 190 (345)
Q Consensus 127 ~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~---------~~~v~~Ll~~~~~~~~-------~~n~~g~T~ 190 (345)
++.+|..|+||||+|+..|+ .+++++|++. |++++ .+|..|+||
T Consensus 177 -------------------~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~-ga~~n~~~~~~~~~d~~g~Tp 236 (273)
T 2pnn_A 177 -------------------ISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILIL-GAKLHPTLKLEEITNRKGLTP 236 (273)
T ss_dssp -------------------TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHH-HHHHCTTCCGGGCCCTTSCCH
T ss_pred -------------------ceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHh-hhhcccccccccccCCCCCCH
Confidence 89999999999999999998 8999999999 88997 599999999
Q ss_pred HHHHHhcCCCCchhhHHHHHHHcccc
Q 043760 191 WDILAQSKRDIKDWDTGELLRRAGAI 216 (345)
Q Consensus 191 L~~a~~~~~~~~~~~i~~~L~~~ga~ 216 (345)
||+|+. .++.+++++|++.||+
T Consensus 237 L~~A~~----~g~~~iv~~Ll~~ga~ 258 (273)
T 2pnn_A 237 LALAAS----SGKIGVLAYILQREIH 258 (273)
T ss_dssp HHHHHH----TTCHHHHHHHHHHHTC
T ss_pred HHHHHH----hChHHHHHHHHHCCCC
Confidence 999999 8899999999999993
No 37
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=2.2e-33 Score=249.07 Aligned_cols=199 Identities=14% Similarity=0.051 Sum_probs=165.5
Q ss_pred CCHHHHHHHHhcCCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHHH
Q 043760 3 GSVNTLLELRQQDPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKALL 82 (345)
Q Consensus 3 g~~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll 82 (345)
.+.+.+..+|..+ ++ ...|..|+||||+|+..|+.+++++|++.++++ +.. +|+||||+|+..|+.+++++|+
T Consensus 10 ~~~~~v~~lL~~~-~~---~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~--~g~t~L~~A~~~g~~~~v~~Ll 82 (285)
T 3kea_A 10 WKSKQLKSFLSSK-DT---FKADVHGHSASYYAIADNNVRLVCTLLNAGALK-NLL--ENEFPLHQAATLEDTKIVKILL 82 (285)
T ss_dssp CCHHHHHHHHHST-TT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGG-SCC--TTCCHHHHHTTSSSCHHHHHHH
T ss_pred cCHHHHHHHHHhC-CC---CccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCC--CCCCHHHHHHHcCCHHHHHHHH
Confidence 4556666666655 22 234888999999999999999999999999887 555 4899999999999999999999
Q ss_pred hhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCcc-------------HHHHHHhcCCccccccc
Q 043760 83 QVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGS-------------TEVLLENMGDFELLNAK 149 (345)
Q Consensus 83 ~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~-------------~~~l~~~~~~~~~~~~~ 149 (345)
++|+++ +..|..|.||||+|+..|+.+++++|++.|++........+.+ +++|++.+.. . .
T Consensus 83 ~~ga~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~---~--~ 156 (285)
T 3kea_A 83 FSGLDD-SQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPS---T--F 156 (285)
T ss_dssp HTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCT---T--C
T ss_pred HCCCCC-CCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCc---c--c
Confidence 999998 7889999999999999999999999999988865433222123 6666666543 2 3
Q ss_pred CC-CCCCHHHHHHHcCCHHHHHHhhhcCCccccccCCCCCcH-HHHHHhcCCCCchhhHHHHHHHccccccc
Q 043760 150 DD-YGMTILLLAVADKQIEAIKFLTTSTAIEVNAVTANGFTA-WDILAQSKRDIKDWDTGELLRRAGAISAK 219 (345)
Q Consensus 150 d~-~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~g~T~-L~~a~~~~~~~~~~~i~~~L~~~ga~~~~ 219 (345)
+. .|.||||+|+..|+.+++++|+++ |++++.+|..|+|| ||+|+. .++.+++++|++.|+++..
T Consensus 157 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~-gad~n~~~~~g~t~~L~~A~~----~~~~~~v~~Ll~~gad~~~ 223 (285)
T 3kea_A 157 DLAILLSCIHITIKNGHVDMMILLLDY-MTSTNTNNSLLFIPDIKLAID----NKDIEMLQALFKYDINIYS 223 (285)
T ss_dssp CCSTHHHHHHHHHHTTCHHHHHHHHHH-HHHTCTTCCCBCCTTHHHHHH----HTCHHHHHHHTTSCBCSTT
T ss_pred cccCCccHHHHHHHcChHHHHHHHHHc-CCCCCcccCCCCChHHHHHHH----cCCHHHHHHHHHcCCCCCC
Confidence 33 899999999999999999999999 99999999999997 999999 7889999999999998865
No 38
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.2e-32 Score=240.79 Aligned_cols=153 Identities=14% Similarity=0.094 Sum_probs=134.3
Q ss_pred cccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCcc---
Q 043760 56 EELDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGS--- 132 (345)
Q Consensus 56 ~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~--- 132 (345)
+.+|..|+||||+|+..|+.+++++|++.|+++ +..|..|.||||+|+..|+.+++++|++.+++.... +..+.+
T Consensus 53 ~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~-~~~g~t~L~ 130 (285)
T 3d9h_A 53 MGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAV-NIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGV-TADWHTPLF 130 (285)
T ss_dssp CSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCS-CEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCC-CTTCCCHHH
T ss_pred cCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCC-CCCCCCHHH
Confidence 668999999999999999999999999999998 789999999999999999999999999998876533 333333
Q ss_pred ----------HHHHHHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhcCCccccccCCCCCcHHHHHHhcCCCCc
Q 043760 133 ----------TEVLLENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTSTAIEVNAVTANGFTAWDILAQSKRDIK 202 (345)
Q Consensus 133 ----------~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~ 202 (345)
++.|++.+.+ ++. +..|.||||+|+..|+.+++++|++. |++++.+|..|+||||+|+. .+
T Consensus 131 ~A~~~~~~~~v~~Ll~~g~~---~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~----~~ 201 (285)
T 3d9h_A 131 NACVSGSWDCVNLLLQHGAS---VQP-ESDLASPIHEAARRGHVECVNSLIAY-GGNIDHKISHLGTPLYLACE----NQ 201 (285)
T ss_dssp HHHHHTCHHHHHHHHHTTCC---SSC-SCTTSCHHHHHHHHTCHHHHHHHHHT-TCCTTCCBTTTBCHHHHHHH----TT
T ss_pred HHHHcCHHHHHHHHHHCCCC---CCC-CCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHH----cC
Confidence 7777777655 443 44599999999999999999999998 88999999999999999999 88
Q ss_pred hhhHHHHHHHccccccc
Q 043760 203 DWDTGELLRRAGAISAK 219 (345)
Q Consensus 203 ~~~i~~~L~~~ga~~~~ 219 (345)
+.+++++|++.|++...
T Consensus 202 ~~~~v~~Ll~~ga~~~~ 218 (285)
T 3d9h_A 202 QRACVKKLLESGADVNQ 218 (285)
T ss_dssp CHHHHHHHHHTTCCTTC
T ss_pred cHHHHHHHHHCCCCCCC
Confidence 89999999999998764
No 39
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=7.7e-32 Score=232.07 Aligned_cols=177 Identities=21% Similarity=0.204 Sum_probs=162.7
Q ss_pred CCCHHHHHHHHhcCCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHH
Q 043760 2 AGSVNTLLELRQQDPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKAL 81 (345)
Q Consensus 2 ~g~~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~L 81 (345)
.|+.++++.|++.+.++... +..|.||||+|+..|+.+++++|++.++...+..|..|.||||+|+..|+.+++++|
T Consensus 54 ~~~~~~v~~Ll~~g~~~~~~---~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~L 130 (237)
T 3b7b_A 54 NNHLEAVKYLIKAGALVDPK---DAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLL 130 (237)
T ss_dssp TTCHHHHHHHHTTTCCCCCC---CTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred hCCHHHHHHHHhCCCCCCCC---CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 58999999999999876544 889999999999999999999999999544488999999999999999999999999
Q ss_pred HhhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHH
Q 043760 82 LQVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAV 161 (345)
Q Consensus 82 l~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~ 161 (345)
+++|+++ +..+..|.||||+|+..|+.+++++|++.+++ ++.+|..|.||||+|+
T Consensus 131 l~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------------------------~~~~~~~g~t~L~~A~ 185 (237)
T 3b7b_A 131 LSKGSDI-NIRDNEENICLHWAAFSGCVDIAEILLAAKCD------------------------LHAVNIHGDSPLHIAA 185 (237)
T ss_dssp HHTTCCT-TCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCC------------------------TTCCCTTCCCHHHHHH
T ss_pred HHCCCCC-CccCCCCCCHHHHHHHCCCHHHHHHHHHcCCC------------------------CCCcCCCCCCHHHHHH
Confidence 9999999 78999999999999999999999999999998 8899999999999999
Q ss_pred HcCCHHHHHHhhhcCCccccccCCCCCcHHHHHHhcCCCCchhhHHHHHH
Q 043760 162 ADKQIEAIKFLTTSTAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELLR 211 (345)
Q Consensus 162 ~~g~~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~ 211 (345)
..|+.+++++|+++ |++++.+|..|+||||+|+. .++.+.+..|+
T Consensus 186 ~~~~~~~v~~Ll~~-gad~~~~d~~g~t~l~~A~~----~~~~~~~~~l~ 230 (237)
T 3b7b_A 186 RENRYDCVVLFLSR-DSDVTLKNKEGETPLQCASL----NSQVWSALQMS 230 (237)
T ss_dssp HTTCHHHHHHHHTT-TCCTTCCCTTSCCHHHHSCT----TCHHHHHHHHH
T ss_pred HhCCHhHHHHHHHc-CCCCCccCCCCCCHHHHHHH----HHHHHHHHHHH
Confidence 99999999999999 99999999999999999999 66665444433
No 40
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=3.7e-32 Score=232.56 Aligned_cols=175 Identities=21% Similarity=0.235 Sum_probs=160.0
Q ss_pred CCCHHHHHHHHhcC--CccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCC--CCcccccCCCCchHHHHHHHcCCHHH
Q 043760 2 AGSVNTLLELRQQD--PLILERPTVNCLSETPLHVAALLGHEDFAKEILPQK--PRIAEELDSRKSSALHIASQKGYVGI 77 (345)
Q Consensus 2 ~g~~~~v~~ll~~~--~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~--~~~~~~~d~~g~tpLh~A~~~g~~~i 77 (345)
.|+.++++.|++.+ +++.. ..+..|.||||+|+..|+.+++++|++.+ +++ +.+|..|.||||+|+..|+.++
T Consensus 46 ~~~~~~v~~Ll~~~~~~~~~~--~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~~~g~t~L~~A~~~~~~~~ 122 (228)
T 2dzn_A 46 FQAHEITSFLLSKMENVNLDD--YPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDL-NKITNQGVTCLHLAVGKKWFEV 122 (228)
T ss_dssp TTCHHHHHHHHHTCTTCCGGG--CCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCT-TCCCTTCCCHHHHHHHTTCHHH
T ss_pred cCCHHHHHHHHhccccccccc--cCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccc-ccCCcCCCCHHHHHHHcCCHhH
Confidence 58999999999999 44433 14889999999999999999999999998 776 8889999999999999999999
Q ss_pred HHHHHhhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcC-CCcccccccCCccHHHHHHhcCCcccccccCCCCCCH
Q 043760 78 VKALLQVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAK-PDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTI 156 (345)
Q Consensus 78 v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~ 156 (345)
+++|+++|+++ +..|..|.||||+|+..|+.+++++|++.+ .+ ++.+|..|+||
T Consensus 123 ~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~------------------------~~~~d~~g~t~ 177 (228)
T 2dzn_A 123 SQFLIENGASV-RIKDKFNQIPLHRAASVGSLKLIELLCGLGKSA------------------------VNWQDKQGWTP 177 (228)
T ss_dssp HHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCC------------------------SCCCCTTSCCH
T ss_pred HHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHhcCccc------------------------ccCcCCCCCCH
Confidence 99999999999 889999999999999999999999999998 66 88999999999
Q ss_pred HHHHHHcCCHHHHHHhh-hcCCccccccCCCCCcHHHHHHhcCCCCchhhHHHHHHH
Q 043760 157 LLLAVADKQIEAIKFLT-TSTAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELLRR 212 (345)
Q Consensus 157 Lh~A~~~g~~~~v~~Ll-~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~ 212 (345)
||+|+..|+.+++++|+ +. |++++.+|..|+||||+|.. . ++.++|++
T Consensus 178 L~~A~~~~~~~~v~~Ll~~~-ga~~~~~~~~g~t~l~~A~~----~---~~~~~l~~ 226 (228)
T 2dzn_A 178 LFHALAEGHGDAAVLLVEKY-GAEYDLVDNKGAKAEDVALN----E---QVKKFFLN 226 (228)
T ss_dssp HHHHHHTTCHHHHHHHHHHH-CCCSCCBCTTSCBGGGGCSS----T---THHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHhc-CCCCCccCCCCCcHHHHHHH----H---HHHHHHHh
Confidence 99999999999999999 66 99999999999999999977 2 56677764
No 41
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.4e-31 Score=251.26 Aligned_cols=205 Identities=27% Similarity=0.356 Sum_probs=172.8
Q ss_pred CCCHHHHHHHHhcCCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHH
Q 043760 2 AGSVNTLLELRQQDPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKAL 81 (345)
Q Consensus 2 ~g~~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~L 81 (345)
.|++++|+.|++++.++... +..|.||||+|+..|+.+++++|++.++++ +.+|..|.||||+|+..|+.+++++|
T Consensus 24 ~g~~~~v~~Ll~~g~~~~~~---~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~L 99 (437)
T 1n11_A 24 MGHLPIVKNLLQRGASPNVS---NVKVETPLHMAARAGHTEVAKYLLQNKAKV-NAKAKDDQTPLHCAARIGHTNMVKLL 99 (437)
T ss_dssp HTCHHHHHHHHHTTCCSCCS---SSCCCCHHHHHHHHTCHHHHHHHHHHTCCS-SCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCCCCC---CCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCCCCCCCCHHHHHHHCCCHHHHHHH
Confidence 48999999999998875543 788999999999999999999999999988 88899999999999999999999999
Q ss_pred HhhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCcc-------------HHHHHHhcCCcccccc
Q 043760 82 LQVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGS-------------TEVLLENMGDFELLNA 148 (345)
Q Consensus 82 l~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~-------------~~~l~~~~~~~~~~~~ 148 (345)
+++|+++ +..+..|.||||+|+..|+.+++++|++.+.+.... +..+.+ +++|++.+.+ ++.
T Consensus 100 l~~ga~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~---~~~ 174 (437)
T 1n11_A 100 LENNANP-NLATTAGHTPLHIAAREGHVETVLALLEKEASQACM-TKKGFTPLHVAAKYGKVRVAELLLERDAH---PNA 174 (437)
T ss_dssp HHHTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTC
T ss_pred HhCCCCC-CCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCC-CCCCCCHHHHHHHcCCHHHHHHHHhCCCC---CCC
Confidence 9999998 788999999999999999999999999988765432 222322 6777776665 777
Q ss_pred cCCCCCCHHHHHHHcCCHHHHHHhhhcCCccccccCCCCCcHHHHHHhcCCCCchhhHHHHHHHcccccccc
Q 043760 149 KDDYGMTILLLAVADKQIEAIKFLTTSTAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELLRRAGAISAKD 220 (345)
Q Consensus 149 ~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga~~~~~ 220 (345)
.+..|.||||+|+..|+.+++++|++. +++++..+..|.||||+|+. .++.+++++|++.|++.+..
T Consensus 175 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~----~~~~~~~~~Ll~~g~~~~~~ 241 (437)
T 1n11_A 175 AGKNGLTPLHVAVHHNNLDIVKLLLPR-GGSPHSPAWNGYTPLHIAAK----QNQVEVARSLLQYGGSANAE 241 (437)
T ss_dssp CCSSCCCHHHHHHHTTCHHHHHHHGGG-TCCSCCCCTTCCCHHHHHHH----TTCHHHHHHHHHTTCCTTCC
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhC-CCCCCCcCCCCCCHHHHHHH----cCCHHHHHHHHHcCCCCCCC
Confidence 888888888888888888888888888 77888888888888888888 77788888888888776543
No 42
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=3.4e-32 Score=240.10 Aligned_cols=192 Identities=22% Similarity=0.203 Sum_probs=159.9
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHhcCCCCc--ccccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHH
Q 043760 24 VNCLSETPLHVAALLGHEDFAKEILPQKPRI--AEELDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLH 101 (345)
Q Consensus 24 ~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~--~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh 101 (345)
+|..|+||||+||..|+.+++++|++.+++. ++.+|..|+||||+|+..|+.+++++|+++|+++ +..|..|.||||
T Consensus 5 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~ 83 (282)
T 1oy3_D 5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGV-LVAERGGHTALH 83 (282)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTSCCHHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHH
Confidence 4889999999999999999999999988762 4888999999999999999999999999999999 789999999999
Q ss_pred HHHHcCcHHHHHHHHhcCCCcccccccCC------------cc-----------HHHHHHhcCCcccccccCCCCCCHHH
Q 043760 102 LAAMRGHIDVLEELVRAKPDAASTRLIWV------------GS-----------TEVLLENMGDFELLNAKDDYGMTILL 158 (345)
Q Consensus 102 ~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~------------~~-----------~~~l~~~~~~~~~~~~~d~~g~t~Lh 158 (345)
+|+..|+.+++++|++.+++......... .. .............++.+|..|.||||
T Consensus 84 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~ 163 (282)
T 1oy3_D 84 LACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLH 163 (282)
T ss_dssp HHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHH
T ss_pred HHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHH
Confidence 99999999999999998876422111100 00 00000011112237888999999999
Q ss_pred HHHHcCCHHHHHHhhhcCCccccccCCC-CCcHHHHHHhcCCCCchhhHHHHHHHccccccccc
Q 043760 159 LAVADKQIEAIKFLTTSTAIEVNAVTAN-GFTAWDILAQSKRDIKDWDTGELLRRAGAISAKDL 221 (345)
Q Consensus 159 ~A~~~g~~~~v~~Ll~~~~~~~~~~n~~-g~T~L~~a~~~~~~~~~~~i~~~L~~~ga~~~~~~ 221 (345)
+|+..|+.+++++|++. |++++.++.. |+||||+|+. .++.+++++|++.|+++....
T Consensus 164 ~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~g~tpL~~A~~----~~~~~~v~~Ll~~gad~~~~d 222 (282)
T 1oy3_D 164 VAVIHKDAEMVRLLRDA-GADLNKPEPTCGRTPLHLAVE----AQAASVLELLLKAGADPTARM 222 (282)
T ss_dssp HHHHTTCHHHHHHHHHH-TCCTTCCCTTTCCCHHHHHHH----TTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHHcCCHHHHHHHHHc-CCCCCCCCCCCCcCHHHHHHH----cCCHHHHHHHHHcCCCCcccc
Confidence 99999999999999999 8999999865 9999999999 889999999999999886543
No 43
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=100.00 E-value=1.3e-32 Score=242.94 Aligned_cols=183 Identities=16% Similarity=0.201 Sum_probs=163.4
Q ss_pred CCHHHHHHHHhcCCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHH-----HcCCHHH
Q 043760 3 GSVNTLLELRQQDPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIAS-----QKGYVGI 77 (345)
Q Consensus 3 g~~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~-----~~g~~~i 77 (345)
|+++.++.+++...+.. .+..|..|+||||+|+..|+.+++++|++.++..++..|..|.||||+|+ ..++.++
T Consensus 87 ~~~~~~~~l~~~~~~~~-~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~ 165 (276)
T 4hbd_A 87 RHLVTFRAMSARLLDYV-VNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIET 165 (276)
T ss_dssp HHHHHHHHHCHHHHHHH-HTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHH
T ss_pred HHHHHHHHHHHHHHhhc-CcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHH
Confidence 45666777766554421 12348899999999999999999999999998444999999999999999 6789999
Q ss_pred HHHHHhhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHH
Q 043760 78 VKALLQVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTIL 157 (345)
Q Consensus 78 v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~L 157 (345)
+++|++.|.+. ...+..|+||||+|+..|+.+++++|++.|++ ++.+|..|+|||
T Consensus 166 v~~Ll~~g~~~-~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad------------------------~n~~d~~G~TpL 220 (276)
T 4hbd_A 166 VLQLFRLGNIN-AKASQAGQTALMLAVSHGRVDVVKALLACEAD------------------------VNVQDDDGSTAL 220 (276)
T ss_dssp HHHHHHHSCTT-CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC------------------------TTCCCTTSCCHH
T ss_pred HHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC------------------------CCCCCCCCCCHH
Confidence 99999999887 78899999999999999999999999999998 899999999999
Q ss_pred HHHHHcCCHHHHHHhhhcCCccccccCCCCCcHHHHHHhcCCCCchhhHHHHHHHccc
Q 043760 158 LLAVADKQIEAIKFLTTSTAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELLRRAGA 215 (345)
Q Consensus 158 h~A~~~g~~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga 215 (345)
|+|+..|+.+++++|++..|++++.+|..|+||||+|+. .++.+++++|++++.
T Consensus 221 h~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~----~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 221 MCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALD----AGQSEIASMLYSRMN 274 (276)
T ss_dssp HHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHH----HTCHHHHHHHHHHCC
T ss_pred HHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHH----cCCHHHHHHHHhccC
Confidence 999999999999999995599999999999999999999 889999999998653
No 44
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=100.00 E-value=1.6e-32 Score=223.26 Aligned_cols=160 Identities=29% Similarity=0.341 Sum_probs=148.3
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHHHHH
Q 043760 25 NCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLHLAA 104 (345)
Q Consensus 25 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~ 104 (345)
|..|.||||.|+..|+.+++++|++.++...+..+..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~ 83 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADV-HAKDKGGLVPLHNAC 83 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCC-CccCCCCCCHHHHHH
Confidence 6779999999999999999999999766555788899999999999999999999999999999 889999999999999
Q ss_pred HcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhcCCccccccC
Q 043760 105 MRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTSTAIEVNAVT 184 (345)
Q Consensus 105 ~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n 184 (345)
..|+.+++++|++.+++ ++.+|..|+||||+|+..|+.+++++|++. |++++.+|
T Consensus 84 ~~~~~~~v~~Ll~~g~~------------------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~ 138 (165)
T 3twr_A 84 SYGHYEVAELLVKHGAV------------------------VNVADLWKFTPLHEAAAKGKYEICKLLLQH-GADPTKKN 138 (165)
T ss_dssp HTTCHHHHHHHHHTTCC------------------------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCC
T ss_pred HcCcHHHHHHHHhCCCC------------------------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCcccC
Confidence 99999999999999998 889999999999999999999999999999 99999999
Q ss_pred CCCCcHHHHHHhcCCCCchhhHHHHHHHccc
Q 043760 185 ANGFTAWDILAQSKRDIKDWDTGELLRRAGA 215 (345)
Q Consensus 185 ~~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga 215 (345)
..|+||||+|.. ++.+++++|++.||
T Consensus 139 ~~g~t~l~~a~~-----~~~~i~~~L~~~gA 164 (165)
T 3twr_A 139 RDGNTPLDLVKD-----GDTDIQDLLRGDAA 164 (165)
T ss_dssp TTSCCTGGGSCT-----TCHHHHHHHHTC--
T ss_pred CCCCChhHhHhc-----CChHHHHHHhhccc
Confidence 999999999755 45699999999887
No 45
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=100.00 E-value=4e-32 Score=224.10 Aligned_cols=164 Identities=21% Similarity=0.146 Sum_probs=153.4
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHH
Q 043760 26 CLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLHLAAM 105 (345)
Q Consensus 26 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 105 (345)
..+.++||.|+..|+.+++++|++.++..++.+|..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+.
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 81 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARI-NVMNRGDDTPLHLAAS 81 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHH
Confidence 457899999999999999999999976655899999999999999999999999999999999 7899999999999999
Q ss_pred cCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhcCCccccccCC
Q 043760 106 RGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTSTAIEVNAVTA 185 (345)
Q Consensus 106 ~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~ 185 (345)
.|+.+++++|++.+++ ++.+|..|.||||+|+..|+.+++++|++. |++++.+|.
T Consensus 82 ~~~~~~v~~Ll~~g~~------------------------~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~ 136 (179)
T 3f6q_A 82 HGHRDIVQKLLQYKAD------------------------INAVNEHGNVPLHYACFWGQDQVAEDLVAN-GALVSICNK 136 (179)
T ss_dssp TTCHHHHHHHHHTTCC------------------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCSSBCCT
T ss_pred cCCHHHHHHHHHcCCC------------------------CCccCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCcchhcc
Confidence 9999999999999998 899999999999999999999999999999 999999999
Q ss_pred CCCcHHHHHHhcCCCCchhhHHHHHHHccccccc
Q 043760 186 NGFTAWDILAQSKRDIKDWDTGELLRRAGAISAK 219 (345)
Q Consensus 186 ~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga~~~~ 219 (345)
.|.||||+|+. .++.+++++|++.|++.+.
T Consensus 137 ~g~tpl~~A~~----~~~~~~~~~L~~~g~~~~~ 166 (179)
T 3f6q_A 137 YGEMPVDKAKA----PLRELLRERAEKMGQNLNR 166 (179)
T ss_dssp TSCCGGGGSCH----HHHHHHHHHHHHTTCCCSC
T ss_pred CCCCcHHHHHH----HHHHHHHHHHHHhhcCccc
Confidence 99999999998 7889999999999998865
No 46
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.98 E-value=2e-31 Score=228.88 Aligned_cols=174 Identities=18% Similarity=0.190 Sum_probs=150.1
Q ss_pred CCCcHHHHHHHcCCHHHHHHHhcC-CCCcccccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCC----cCCCCCCCcHHH
Q 043760 27 LSETPLHVAALLGHEDFAKEILPQ-KPRIAEELDSRKSSALHIASQKGYVGIVKALLQVIPDKC----SDTDVDGRNPLH 101 (345)
Q Consensus 27 ~g~t~Lh~Aa~~g~~~~v~~Ll~~-~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~----~~~d~~g~tpLh 101 (345)
.|+||||+|+..|+.+++++|++. +.++ +.+|..|+||||+|+..|+.+++++|+++|+++. ...|..|.||||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~ 80 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEV-HQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALH 80 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCc-ccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHH
Confidence 489999999999999999999998 7776 8899999999999999999999999999998763 456779999999
Q ss_pred HHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhcCCcccc
Q 043760 102 LAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTSTAIEVN 181 (345)
Q Consensus 102 ~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~ 181 (345)
+|+..|+.+++++|++.+++......... .....+..|..|.||||+|+..|+.+++++|++. |++++
T Consensus 81 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~-----------~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~ 148 (232)
T 2rfa_A 81 IAVINQNVNLVRALLARGASVSARATGSV-----------FHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEH-GADIR 148 (232)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCCSGG-----------GSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHT-TCCTT
T ss_pred HHHHcCCHHHHHHHHhCCCCCCcccCCcc-----------eeecccccccCCCCHHHHHHHcCCHHHHHHHHHC-CCCCC
Confidence 99999999999999999988433211000 0001334566899999999999999999999999 99999
Q ss_pred ccCCCCCcHHHHHHhcCCCCchhhHH----HHHHHccccc
Q 043760 182 AVTANGFTAWDILAQSKRDIKDWDTG----ELLRRAGAIS 217 (345)
Q Consensus 182 ~~n~~g~T~L~~a~~~~~~~~~~~i~----~~L~~~ga~~ 217 (345)
.+|..|+||||+|+. .++.+++ ++|++.|++.
T Consensus 149 ~~d~~g~t~L~~A~~----~~~~~~~~~i~~~Ll~~g~~~ 184 (232)
T 2rfa_A 149 AQDSLGNTVLHILIL----QPNKTFACQMYNLLLSYDGGD 184 (232)
T ss_dssp CCCTTSCCHHHHHHT----CSCHHHHHHHHHHHHHTTCSC
T ss_pred CCCCCCCCHHHHHHH----cCChHHHHHHHHHHHhcCCch
Confidence 999999999999999 7777777 9999999976
No 47
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.98 E-value=2.3e-31 Score=232.90 Aligned_cols=161 Identities=19% Similarity=0.189 Sum_probs=151.3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHHc
Q 043760 27 LSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLHLAAMR 106 (345)
Q Consensus 27 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~ 106 (345)
+|+||||+||..|+.+++++|++.+.++ +.+|..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 79 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAV-NIITADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPLFNACVS 79 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHc
Confidence 5899999999999999999999999997 899999999999999999999999999999999 88999999999999999
Q ss_pred CcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhcCCccccccCCC
Q 043760 107 GHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTSTAIEVNAVTAN 186 (345)
Q Consensus 107 g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~ 186 (345)
|+.+++++|++.+++ ++. +..|.||||+|+..|+.+++++|++. |++++.+|..
T Consensus 80 ~~~~~v~~Ll~~g~~------------------------~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~ 133 (261)
T 2xai_A 80 GSWDCVNLLLQHGAS------------------------VQP-ESDLASPIHEAARRGHVECVNSLIAY-GGNIDHKISH 133 (261)
T ss_dssp TCHHHHHHHHHTTCC------------------------SSC-SCTTCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCBTT
T ss_pred CCHHHHHHHHHCCCC------------------------CCC-CCCCCCHHHHHHHcCcHHHHHHHHHc-CCCCCcCCCC
Confidence 999999999999988 443 45699999999999999999999999 8999999999
Q ss_pred CCcHHHHHHhcCCCCchhhHHHHHHHccccccc
Q 043760 187 GFTAWDILAQSKRDIKDWDTGELLRRAGAISAK 219 (345)
Q Consensus 187 g~T~L~~a~~~~~~~~~~~i~~~L~~~ga~~~~ 219 (345)
|+||||+|+. .++.+++++|++.|++.+.
T Consensus 134 g~t~L~~A~~----~~~~~~v~~Ll~~g~~~~~ 162 (261)
T 2xai_A 134 LGTPLYLACE----NQQRACVKKLLESGADVNQ 162 (261)
T ss_dssp TBCHHHHHHH----TTCHHHHHHHHHHTCCTTC
T ss_pred CCCHHHHHHH----hCCHHHHHHHHHcCCCCCC
Confidence 9999999999 8899999999999998865
No 48
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.98 E-value=2.9e-32 Score=234.84 Aligned_cols=180 Identities=23% Similarity=0.263 Sum_probs=155.7
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHhcCCCC---cccccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHH
Q 043760 24 VNCLSETPLHVAALLGHEDFAKEILPQKPR---IAEELDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPL 100 (345)
Q Consensus 24 ~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~---~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL 100 (345)
+|..|+||||+|+..|+.+++++|++.+.. .++.+|..|.||||+|+..|+.+++++|+++|+++ +..|..|.|||
T Consensus 4 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L 82 (236)
T 1ikn_D 4 LTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDP-ELRDFRGNTPL 82 (236)
T ss_dssp ---CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCS-CCCCTTCCCHH
T ss_pred CCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHH
Confidence 488999999999999999999999998763 24888999999999999999999999999999999 78999999999
Q ss_pred HHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhcCCccc
Q 043760 101 HLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTSTAIEV 180 (345)
Q Consensus 101 h~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~ 180 (345)
|+|+..|+.+++++|++.+++.... ..++..+..|.||||+|+..|+.+++++|++. |+++
T Consensus 83 ~~A~~~~~~~~v~~Ll~~~~~~~~~------------------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~ 143 (236)
T 1ikn_D 83 HLACEQGCLASVGVLTQSCTTPHLH------------------SILKATNYNGHTCLHLASIHGYLGIVELLVSL-GADV 143 (236)
T ss_dssp HHHHHHTCHHHHHHHHHSTTTTSSS------------------CGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHH-TCCT
T ss_pred HHHHHcCCHHHHHHHHhcccchhHH------------------HHhhccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCC
Confidence 9999999999999999998763211 12678889999999999999999999999999 8999
Q ss_pred cccCC-CCCcHHHHHHhcCCCCchhhHHHHHHHcccccccccCCccch
Q 043760 181 NAVTA-NGFTAWDILAQSKRDIKDWDTGELLRRAGAISAKDLQLPVNE 227 (345)
Q Consensus 181 ~~~n~-~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga~~~~~~~~~~~~ 227 (345)
+.++. .|+||||+|+. .++.+++++|++.|++..........+
T Consensus 144 ~~~~~~~g~tpL~~A~~----~~~~~~v~~Ll~~ga~~~~~~~~g~tp 187 (236)
T 1ikn_D 144 NAQEPCNGRTALHLAVD----LQNPDLVSLLLKCGADVNRVTYQGYSP 187 (236)
T ss_dssp TCCCTTTCCCHHHHHHH----TTCHHHHHHHHTTTCCSCCCCTTCCCG
T ss_pred CCCCCCCCCCHHHHHHH----cCCHHHHHHHHHcCCCCCcccCCCCCH
Confidence 99998 99999999999 889999999999999886543333333
No 49
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.98 E-value=1.9e-31 Score=214.31 Aligned_cols=151 Identities=28% Similarity=0.351 Sum_probs=144.1
Q ss_pred CCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHHcC
Q 043760 28 SETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLHLAAMRG 107 (345)
Q Consensus 28 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g 107 (345)
..|+||.|+..|+.+++++|++.+.++ + .|..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~-~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~ 78 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPF-T-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR-DARTKVDRTPLHMAASEG 78 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCC-C-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHHT
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCC-C-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcC
Confidence 468999999999999999999999876 4 5889999999999999999999999999999 789999999999999999
Q ss_pred cHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhcCCccccccCCCC
Q 043760 108 HIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTSTAIEVNAVTANG 187 (345)
Q Consensus 108 ~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~g 187 (345)
+.+++++|++.+++ ++.+|..|+||||+|+..|+.+++++|++. |++++.+|..|
T Consensus 79 ~~~~v~~Ll~~g~~------------------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g 133 (153)
T 1awc_B 79 HANIVEVLLKHGAD------------------------VNAKDMLKMTALHWATEHNHQEVVELLIKY-GADVHTQSKFC 133 (153)
T ss_dssp CHHHHHHHHTTTCC------------------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTS
T ss_pred hHHHHHHHHHcCCC------------------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCccccCCCC
Confidence 99999999999988 899999999999999999999999999999 99999999999
Q ss_pred CcHHHHHHhcCCCCchhhHHHHH
Q 043760 188 FTAWDILAQSKRDIKDWDTGELL 210 (345)
Q Consensus 188 ~T~L~~a~~~~~~~~~~~i~~~L 210 (345)
+||||+|+. .++.+++++|
T Consensus 134 ~t~l~~A~~----~~~~~i~~~L 152 (153)
T 1awc_B 134 KTAFDISID----NGNEDLAEIL 152 (153)
T ss_dssp CCHHHHHHH----TTCHHHHHHH
T ss_pred CCHHHHHHH----cCCHHHHHHh
Confidence 999999999 8889999987
No 50
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.97 E-value=1.6e-31 Score=237.00 Aligned_cols=164 Identities=16% Similarity=0.057 Sum_probs=115.3
Q ss_pred CHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcC
Q 043760 40 HEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAK 119 (345)
Q Consensus 40 ~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~ 119 (345)
..++.++|.+. ++ +.+|..|.||||+|+..|+.+++++|+++|+++ +.. +|+||||+|+..|+.+++++|++.|
T Consensus 12 ~~~v~~lL~~~--~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~--~g~t~L~~A~~~g~~~~v~~Ll~~g 85 (285)
T 3kea_A 12 SKQLKSFLSSK--DT-FKADVHGHSASYYAIADNNVRLVCTLLNAGALK-NLL--ENEFPLHQAATLEDTKIVKILLFSG 85 (285)
T ss_dssp HHHHHHHHHST--TT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGG-SCC--TTCCHHHHHTTSSSCHHHHHHHHTT
T ss_pred HHHHHHHHHhC--CC-CccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCC--CCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 34555555554 34 788999999999999999999999999999998 454 4999999999999999999999999
Q ss_pred CCcccccccCCcc-------------HHHHHHhcCCcccccccCCCC-CCHHHHHHHcCCHHHHHHhhhcCCccccccCC
Q 043760 120 PDAASTRLIWVGS-------------TEVLLENMGDFELLNAKDDYG-MTILLLAVADKQIEAIKFLTTSTAIEVNAVTA 185 (345)
Q Consensus 120 ~~~~~~~~~~~~~-------------~~~l~~~~~~~~~~~~~d~~g-~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~ 185 (345)
++.... +..+.+ +++|++.+.+ ++.+|..| .||||+|+..|+.+++++|++. |+++... .
T Consensus 86 a~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~---~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~-~ 159 (285)
T 3kea_A 86 LDDSQF-DDKGNTALYYAVDSGNMQTVKLFVKKNWR---LMFYGKTGWKTSFYHAVMLNDVSIVSYFLSE-IPSTFDL-A 159 (285)
T ss_dssp CCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHHCGG---GGGCSSSGGGSHHHHHHHTTCHHHHHHHHTT-SCTTCCC-S
T ss_pred CCCCCc-CCCCCcHHHHHHHcCCHHHHHHHHhcCCC---CCccCCCCCCCHHHHHHHcCCHHHHHHHHhC-CCccccc-c
Confidence 984332 222322 5555555444 56666666 5666666666666666666666 4343211 1
Q ss_pred CCCcHHHHHHhcCCCCchhhHHHHHHHccccccc
Q 043760 186 NGFTAWDILAQSKRDIKDWDTGELLRRAGAISAK 219 (345)
Q Consensus 186 ~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga~~~~ 219 (345)
.|.||||+|+. .++.+++++|++.|++++.
T Consensus 160 ~g~t~L~~A~~----~g~~~~v~~Ll~~gad~n~ 189 (285)
T 3kea_A 160 ILLSCIHITIK----NGHVDMMILLLDYMTSTNT 189 (285)
T ss_dssp THHHHHHHHHH----TTCHHHHHHHHHHHHHTCT
T ss_pred CCccHHHHHHH----cChHHHHHHHHHcCCCCCc
Confidence 56666666666 5666666666666666544
No 51
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=1.2e-30 Score=218.79 Aligned_cols=171 Identities=23% Similarity=0.281 Sum_probs=153.8
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHHHHH
Q 043760 25 NCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLHLAA 104 (345)
Q Consensus 25 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~ 104 (345)
+..+.||||.|+..|+.+.++.|+..++..++..|..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~ 80 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADI-NLQNSISDSPYLYAG 80 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH
Confidence 4568999999999999999999999988444889999999999999999999999999999999 789999999999999
Q ss_pred HcCcHHHHHHHHhcC-CCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhcCCcccccc
Q 043760 105 MRGHIDVLEELVRAK-PDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTSTAIEVNAV 183 (345)
Q Consensus 105 ~~g~~~iv~~Ll~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~ 183 (345)
..|+.+++++|++.+ .+ ++..|..|.||||+|+..|+.+++++|++.++++++.+
T Consensus 81 ~~~~~~~~~~Ll~~~~~~------------------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 136 (201)
T 3hra_A 81 AQGRTEILAYMLKHATPD------------------------LNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQ 136 (201)
T ss_dssp HTTCHHHHHHHHHHSCCC------------------------TTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCC
T ss_pred HcCCHHHHHHHHhccCcc------------------------cccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCC
Confidence 999999999999554 44 88899999999999999999999999999955999999
Q ss_pred CCCCCcHHHHHHhcCC-CCchhhHHHHHHHcccccccc
Q 043760 184 TANGFTAWDILAQSKR-DIKDWDTGELLRRAGAISAKD 220 (345)
Q Consensus 184 n~~g~T~L~~a~~~~~-~~~~~~i~~~L~~~ga~~~~~ 220 (345)
|..|+||||+|+.... ..++.+++++|++.|+++...
T Consensus 137 ~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~ 174 (201)
T 3hra_A 137 NDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIK 174 (201)
T ss_dssp CTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCC
T ss_pred CCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCcc
Confidence 9999999999998322 222389999999999988653
No 52
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.97 E-value=3.6e-32 Score=250.34 Aligned_cols=188 Identities=16% Similarity=0.156 Sum_probs=162.5
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHh--------cCCCCcccccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCC
Q 043760 26 CLSETPLHVAALLGHEDFAKEIL--------PQKPRIAEELDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGR 97 (345)
Q Consensus 26 ~~g~t~Lh~Aa~~g~~~~v~~Ll--------~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~ 97 (345)
..|+||||+||..|+.+++++|+ +.|.++ +.+|..|.||||+|+..|+.+++++|+++|+++ +..|..|.
T Consensus 123 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~v-n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~-~~~~~~g~ 200 (373)
T 2fo1_E 123 RHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADV-NAMDCDENTPLMLAVLARRRRLVAYLMKAGADP-TIYNKSER 200 (373)
T ss_dssp SSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTCC
T ss_pred cCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCC-cCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCC-cccCCCCC
Confidence 68999999999999998887776 788888 899999999999999999999999999999999 78999999
Q ss_pred cHHHHHHHcCcHHHHHHHHhcC---CCcccccccCCcc----------------HHHHHHhcCCccc-----ccccCCCC
Q 043760 98 NPLHLAAMRGHIDVLEELVRAK---PDAASTRLIWVGS----------------TEVLLENMGDFEL-----LNAKDDYG 153 (345)
Q Consensus 98 tpLh~A~~~g~~~iv~~Ll~~~---~~~~~~~~~~~~~----------------~~~l~~~~~~~~~-----~~~~d~~g 153 (345)
||||+|+..|+.+++++|++.+ .+.... +..+.+ ++.|++.+.+... .+..|..|
T Consensus 201 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~-d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g 279 (373)
T 2fo1_E 201 SALHQAAANRDFGMMVYMLNSTKLKGDIEEL-DRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKG 279 (373)
T ss_dssp CHHHHHHHTTCHHHHHHHTTSHHHHHTTSCC-CTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCC
T ss_pred CHHHHHHHCCCHHHHHHHHhcCccccChhhc-CCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccC
Confidence 9999999999999999999876 232211 222222 6777777766221 23467899
Q ss_pred CCHHHHHHHcCCHHHHHHhhhcCCccccccCCCCCcHHHHHHhcCCCCchhhHHHHHHHcccccccc
Q 043760 154 MTILLLAVADKQIEAIKFLTTSTAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELLRRAGAISAKD 220 (345)
Q Consensus 154 ~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga~~~~~ 220 (345)
.||||+|+..|+.+++++|++.++++++.+|..|+||||+|+. .++.+++++|++.|++.+..
T Consensus 280 ~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~----~g~~~iv~~Ll~~gad~~~~ 342 (373)
T 2fo1_E 280 RTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQ----EGRIEVVMYLIQQGASVEAV 342 (373)
T ss_dssp CCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHH----HTCHHHHHHHHHTTCCSSCC
T ss_pred CCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHH----cCCHHHHHHHHHcCCCccCC
Confidence 9999999999999999999999779999999999999999999 88999999999999988653
No 53
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.97 E-value=7.5e-31 Score=211.29 Aligned_cols=154 Identities=25% Similarity=0.316 Sum_probs=144.4
Q ss_pred CCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHHcC
Q 043760 28 SETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLHLAAMRG 107 (345)
Q Consensus 28 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g 107 (345)
+.||||.|+..|+.+++++|++......+..|..|.||||+ +..|+.+++++|+++|+++ +..|..|.||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~ 79 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASP-NVQDTSGTSPVHDAARTG 79 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcC
Confidence 56899999999999999999998332338889999999999 9999999999999999999 889999999999999999
Q ss_pred cHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhcCCccccccCCCC
Q 043760 108 HIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTSTAIEVNAVTANG 187 (345)
Q Consensus 108 ~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~g 187 (345)
+.+++++|++.|++ ++.+|..|+||||+|+..|+.+++++|++. ++++.+|..|
T Consensus 80 ~~~~v~~Ll~~g~~------------------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--~~~~~~~~~g 133 (156)
T 1bd8_A 80 FLDTLKVLVEHGAD------------------------VNVPDGTGALPIHLAVQEGHTAVVSFLAAE--SDLHRRDARG 133 (156)
T ss_dssp CHHHHHHHHHTTCC------------------------SCCCCTTSCCHHHHHHHHTCHHHHHHHHTT--SCTTCCCTTS
T ss_pred cHHHHHHHHHcCCC------------------------CCCcCCCCCcHHHHHHHhChHHHHHHHHhc--cCCCCcCCCC
Confidence 99999999999988 889999999999999999999999999998 7999999999
Q ss_pred CcHHHHHHhcCCCCchhhHHHHHHHc
Q 043760 188 FTAWDILAQSKRDIKDWDTGELLRRA 213 (345)
Q Consensus 188 ~T~L~~a~~~~~~~~~~~i~~~L~~~ 213 (345)
.||||+|+. .++.+++++|+++
T Consensus 134 ~t~l~~A~~----~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 134 LTPLELALQ----RGAQDLVDILQGH 155 (156)
T ss_dssp CCHHHHHHH----SCCHHHHHHHHTT
T ss_pred CCHHHHHHH----cCcHHHHHHHHhh
Confidence 999999999 8899999999863
No 54
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=9.8e-31 Score=214.19 Aligned_cols=160 Identities=24% Similarity=0.265 Sum_probs=145.4
Q ss_pred CCCHHHHHHHHhcCCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHH
Q 043760 2 AGSVNTLLELRQQDPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKAL 81 (345)
Q Consensus 2 ~g~~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~L 81 (345)
.|+++.++.|++.++...+. .+..|+||||+|+..|+.+++++|++.+.++ +.+|..|.||||+|+..|+.+++++|
T Consensus 12 ~g~~~~v~~ll~~~~~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~L 88 (172)
T 3v30_A 12 QGELDQLKEHLRKGDNLVNK--PDERGFTPLIWASAFGEIETVRFLLEWGADP-HILAKERESALSLASTGGYTDIVGLL 88 (172)
T ss_dssp TTCHHHHHHHHTTCSGGGGC--CCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred cCCHHHHHHHHHcCcccccC--CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-hhhcccCCCHHHHHHHCCCHHHHHHH
Confidence 68999999999999875443 3889999999999999999999999999998 88999999999999999999999999
Q ss_pred HhhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHH
Q 043760 82 LQVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAV 161 (345)
Q Consensus 82 l~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~ 161 (345)
+++|+++ +..|..|.||||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+
T Consensus 89 l~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~------------------------~~~~~~~g~t~l~~A~ 143 (172)
T 3v30_A 89 LERDVDI-NIYDWNGGTPLLYAVRGNHVKCVEALLARGAD------------------------LTTEADSGYTPMDLAV 143 (172)
T ss_dssp HTTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------------------------TTCCCTTSCCHHHHHH
T ss_pred HHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------------------ccccCCCCCCHHHHHH
Confidence 9999999 88999999999999999999999999999988 8899999999999999
Q ss_pred HcCCHHHHHHhhhcCCccccccCCCCCcH
Q 043760 162 ADKQIEAIKFLTTSTAIEVNAVTANGFTA 190 (345)
Q Consensus 162 ~~g~~~~v~~Ll~~~~~~~~~~n~~g~T~ 190 (345)
..|+.+++++|+++ ++++...|..|.||
T Consensus 144 ~~~~~~~~~~L~~~-~~~~~~~~~~~~~p 171 (172)
T 3v30_A 144 ALGYRKVQQVIENH-ILKLFQSNLVPADP 171 (172)
T ss_dssp HHTCHHHHHHHHHH-HHHHSCC-------
T ss_pred HhCcHHHHHHHHHH-HHHHhcccCCCCCC
Confidence 99999999999999 88999999998887
No 55
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.97 E-value=5.7e-30 Score=232.64 Aligned_cols=199 Identities=21% Similarity=0.231 Sum_probs=171.3
Q ss_pred CCCHHHHHHHHhcCCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHH
Q 043760 2 AGSVNTLLELRQQDPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKAL 81 (345)
Q Consensus 2 ~g~~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~L 81 (345)
.|+.++|+.|++.+.++... |..|+||||+|+..|+.+++++|++.+.++ +.+|..|.||||+|+..|+.+++++|
T Consensus 68 ~g~~~~v~~Ll~~g~~~~~~---~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~L 143 (351)
T 3utm_A 68 YNRVRIVQLLLQHGADVHAK---DKGGLVPLHNACSYGHYEVTELLLKHGACV-NAMDLWQFTPLHEAASKNRVEVCSLL 143 (351)
T ss_dssp TTCHHHHHHHHHTTCCTTCC---CTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCCCcc---CCCCCcHHHHHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 58999999999999886554 889999999999999999999999999998 88899999999999999999999999
Q ss_pred HhhCCCCCcC------------------------------------------------------CCCCCCcHHHHHHHc-
Q 043760 82 LQVIPDKCSD------------------------------------------------------TDVDGRNPLHLAAMR- 106 (345)
Q Consensus 82 l~~~~~~~~~------------------------------------------------------~d~~g~tpLh~A~~~- 106 (345)
+++|+++ +. .+..|.||||+|+..
T Consensus 144 l~~g~~~-~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~ 222 (351)
T 3utm_A 144 LSHGADP-TLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASL 222 (351)
T ss_dssp HHTTCCT-TCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCC
T ss_pred HHcCCCC-ccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHh
Confidence 9999886 33 335678999999998
Q ss_pred --CcHHHHHHHHhcCCCcccccccCCcc-------------HHHHHHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHH
Q 043760 107 --GHIDVLEELVRAKPDAASTRLIWVGS-------------TEVLLENMGDFELLNAKDDYGMTILLLAVADKQIEAIKF 171 (345)
Q Consensus 107 --g~~~iv~~Ll~~~~~~~~~~~~~~~~-------------~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~ 171 (345)
+..+++++|++.+.+.... +..+.+ +++|++.+.+ ++.+|..|+||||+|+..|+.+++++
T Consensus 223 ~~~~~~~~~~Ll~~g~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~---~n~~d~~g~t~L~~A~~~~~~~~v~~ 298 (351)
T 3utm_A 223 HPKRKQVAELLLRKGANVNEK-NKDFMTPLHVAAERAHNDVMEVLHKHGAK---MNALDSLGQTALHRAALAGHLQTCRL 298 (351)
T ss_dssp STTHHHHHHHHHHTTCCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred CccHHHHHHHHHHcCCCcCCc-CCCCCCHHHHHHHcCCHHHHHHHHHCCCC---CCCcCCCCCCHHHHHHHcCcHHHHHH
Confidence 6689999999999886543 334444 7888887777 89999999999999999999999999
Q ss_pred hhhcCCccccccCCCCCcHHHHHHhcCCCCchhhHHHHHHHcccccc
Q 043760 172 LTTSTAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELLRRAGAISA 218 (345)
Q Consensus 172 Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga~~~ 218 (345)
|+++ |++++.+|..|+||+|+|.. +++++|.+.+....
T Consensus 299 Ll~~-gad~~~~~~~g~tal~~a~~--------~~~~~l~~~~~~~~ 336 (351)
T 3utm_A 299 LLSY-GSDPSIISLQGFTAAQMGNE--------AVQQILSESTPMRT 336 (351)
T ss_dssp HHHT-TCCTTCCCTTSCCHHHHSCH--------HHHHHHHHC-----
T ss_pred HHHc-CCCCCCcCCCCCChhhhhhH--------HHHHHHHhcccccc
Confidence 9999 99999999999999999854 68888888776543
No 56
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.97 E-value=5e-31 Score=241.76 Aligned_cols=192 Identities=20% Similarity=0.155 Sum_probs=166.6
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHHHH
Q 043760 24 VNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLHLA 103 (345)
Q Consensus 24 ~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A 103 (345)
.|..|.||||+||..|+.+++++|++.+.++ +.+|..|.||||+|+..|+.+++++|+++|+++ .+.+|.||||+|
T Consensus 16 ~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~g~t~L~~A 91 (364)
T 3ljn_A 16 SDDENMEKIHVAARKGQTDEVRRLIETGVSP-TIQNRFGCTALHLACKFGCVDTAKYLASVGEVH---SLWHGQKPIHLA 91 (364)
T ss_dssp CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCC---CCBTTBCHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCc---cccCCCCHHHHH
Confidence 4778999999999999999999999999998 899999999999999999999999999999965 345899999999
Q ss_pred HHcCcHHHHHHHHhc----CCCcccc----------------cccCCc---------------cHHHHHHhcCCcccccc
Q 043760 104 AMRGHIDVLEELVRA----KPDAAST----------------RLIWVG---------------STEVLLENMGDFELLNA 148 (345)
Q Consensus 104 ~~~g~~~iv~~Ll~~----~~~~~~~----------------~~~~~~---------------~~~~l~~~~~~~~~~~~ 148 (345)
+..|+.+++++|++. +.+.... .+..+. .+++|++.+.+ ++.
T Consensus 92 ~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~---~~~ 168 (364)
T 3ljn_A 92 VMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGAS---PTA 168 (364)
T ss_dssp HHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCC---TTC
T ss_pred HHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCC---Ccc
Confidence 999999999999998 5554430 111222 27788888776 899
Q ss_pred cCCCCCCHHHHHHHcCCHHHHHHhhhcCCcc-----ccccCCCCCcHHHHHHhcCCCCchhhHHHHHHHcccccccccCC
Q 043760 149 KDDYGMTILLLAVADKQIEAIKFLTTSTAIE-----VNAVTANGFTAWDILAQSKRDIKDWDTGELLRRAGAISAKDLQL 223 (345)
Q Consensus 149 ~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~-----~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga~~~~~~~~ 223 (345)
+|..|.||||+|+..|+.+++++|++. |++ ++.+|..|+||||+|+. .++.+++++|++.|++++.....
T Consensus 169 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~~~~g~t~L~~A~~----~g~~~~v~~Ll~~gad~~~~d~~ 243 (364)
T 3ljn_A 169 KDKADETPLMRAMEFRNREALDLMMDT-VPSKSSLRLDYANKQGNSHLHWAIL----INWEDVAMRFVEMGIDVNMEDNE 243 (364)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHH-CSCSSSCCTTCCCTTCCCTTHHHHT----TTCHHHHHHHHTTTCCTTCCCTT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHhc-ccccccccccccCCCCCcHHHHHHH----cCCHHHHHHHHHcCCCCCCCCCC
Confidence 999999999999999999999999998 777 99999999999999999 88999999999999998654433
Q ss_pred ccch
Q 043760 224 PVNE 227 (345)
Q Consensus 224 ~~~~ 227 (345)
..++
T Consensus 244 g~tp 247 (364)
T 3ljn_A 244 HTVP 247 (364)
T ss_dssp SCCH
T ss_pred CCCH
Confidence 3333
No 57
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.97 E-value=1.4e-29 Score=229.69 Aligned_cols=182 Identities=24% Similarity=0.201 Sum_probs=160.3
Q ss_pred CCCHHHHHHHHhcCCccccCC-------CCCCCCCcHHHHHHHcCCHHHHHHHhc-CCCCcccccCCCCchHHHHHHHcC
Q 043760 2 AGSVNTLLELRQQDPLILERP-------TVNCLSETPLHVAALLGHEDFAKEILP-QKPRIAEELDSRKSSALHIASQKG 73 (345)
Q Consensus 2 ~g~~~~v~~ll~~~~~~~~~~-------~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~-~~~~~~~~~d~~g~tpLh~A~~~g 73 (345)
.|+.++++.|++.++++.... ..+..|.||||+|+..|+.+++++|++ .+.++ +.+|..|.|+||.++..+
T Consensus 135 ~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~-n~~d~~g~t~l~~~~~~~ 213 (337)
T 4g8k_A 135 YGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADV-NACDNMGRNALIHALLSS 213 (337)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCT-TCCCTTSCCHHHHHHHHS
T ss_pred cCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCc-CccCCCCCcHHHHHHHHc
Confidence 588999999999987654321 235679999999999999999999996 47787 899999999999988765
Q ss_pred C----HHHHHHHHhhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhc-CCCcccccccCCccHHHHHHhcCCcccccc
Q 043760 74 Y----VGIVKALLQVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRA-KPDAASTRLIWVGSTEVLLENMGDFELLNA 148 (345)
Q Consensus 74 ~----~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 148 (345)
. .+++++|+++|+++ +.+|..|+||||+|+..|+.+++++|++. +.+ ++.
T Consensus 214 ~~~~~~~i~~lLl~~gad~-n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~------------------------vn~ 268 (337)
T 4g8k_A 214 DDSDVEAITHLLLDHGADV-NVRGERGKTPLILAVEKKHLGLVQRLLEQEHIE------------------------IND 268 (337)
T ss_dssp CTTTHHHHHHHHHHTTCCT-TCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCC------------------------TTC
T ss_pred CcccHHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCc------------------------ccC
Confidence 4 46889999999999 88999999999999999999999999986 556 899
Q ss_pred cCCCCCCHHHHHHHcCCHHHHHHhhhcCCccccccCCCCCcHHHHHHhcCCCCchhhHHHHHHHccccccc
Q 043760 149 KDDYGMTILLLAVADKQIEAIKFLTTSTAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELLRRAGAISAK 219 (345)
Q Consensus 149 ~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga~~~~ 219 (345)
+|..|+||||+|++.|+.++|++||++ |+++|.+ +|||+|+. .++.+++++|+++||+++.
T Consensus 269 ~d~~G~TpL~~A~~~g~~~iv~~Ll~~-GAd~n~~-----~~L~~A~~----~~~~~iv~~Ll~~GA~~d~ 329 (337)
T 4g8k_A 269 TDSDGKTALLLAVELKLKKIAELLCKR-GASTDCG-----DLVMTARR----NYDHSLVKVLLSHGAKEDF 329 (337)
T ss_dssp BCTTSCBHHHHHHHTTCHHHHHHHHTT-SCSSTTC-----CHHHHHHH----TTCHHHHHHHHHTTCCC--
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCC-----CHHHHHHH----cCCHHHHHHHHHCcCCCCC
Confidence 999999999999999999999999999 8898764 59999999 8889999999999998854
No 58
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=1.1e-30 Score=227.79 Aligned_cols=163 Identities=20% Similarity=0.191 Sum_probs=144.0
Q ss_pred CCCcHHHHHHHcCCHH----HHHHHhcCCCCcccc----cCCCCchHHHHHHHc---CCHHHHHHHHhhCCCCCc-----
Q 043760 27 LSETPLHVAALLGHED----FAKEILPQKPRIAEE----LDSRKSSALHIASQK---GYVGIVKALLQVIPDKCS----- 90 (345)
Q Consensus 27 ~g~t~Lh~Aa~~g~~~----~v~~Ll~~~~~~~~~----~d~~g~tpLh~A~~~---g~~~iv~~Ll~~~~~~~~----- 90 (345)
.|+||||+|+..|+.+ ++++|++.+.++ +. +|..|+||||+|+.. |+.+++++|++.|+++..
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i-~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~ 79 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYL-TDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLV 79 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCT-TSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGG
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhc
Confidence 4899999999999997 667777789888 66 899999999999999 999999999999887621
Q ss_pred -----CCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCC-------------
Q 043760 91 -----DTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDY------------- 152 (345)
Q Consensus 91 -----~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~------------- 152 (345)
..|..|.||||+|+..|+.+++++|++.|++ ++.+|..
T Consensus 80 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~------------------------~~~~~~~~~~~~~~~~~~~~ 135 (256)
T 2etb_A 80 NAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGAD------------------------VHLRACGRFFQKHQGTCFYF 135 (256)
T ss_dssp GCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC------------------------TTCCCCSGGGSCCSSSCCCS
T ss_pred ccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCC------------------------CCcccccccccccccccccC
Confidence 2347899999999999999999999999998 5666554
Q ss_pred CCCHHHHHHHcCCHHHHHHhhh---cCCccccccCCCCCcHHHHHHhcCCCCchhh-------HHHHHHHccccc
Q 043760 153 GMTILLLAVADKQIEAIKFLTT---STAIEVNAVTANGFTAWDILAQSKRDIKDWD-------TGELLRRAGAIS 217 (345)
Q Consensus 153 g~t~Lh~A~~~g~~~~v~~Ll~---~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~-------i~~~L~~~ga~~ 217 (345)
|.||||+|+..|+.+++++|++ . |++++.+|..|+||||+|+... .++.+ ++++|++.|++.
T Consensus 136 g~tpL~~A~~~~~~~~v~~Ll~~~~~-ga~~n~~d~~g~TpLh~A~~~~--~~~~~~~~~~~~iv~~Ll~~ga~~ 207 (256)
T 2etb_A 136 GELPLSLAACTKQWDVVTYLLENPHQ-PASLEATDSLGNTVLHALVMIA--DNSPENSALVIHMYDGLLQMGARL 207 (256)
T ss_dssp CSSHHHHHHHTTCHHHHHHHHHCSSC-CCCTTCCCTTSCCHHHHHHHHC--CSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcccc-CCCcCccCCCCCCHHHHHHHcc--cCCchhhHHHHHHHHHHHHcCCCc
Confidence 9999999999999999999999 6 9999999999999999999732 23455 999999999988
No 59
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.97 E-value=1.9e-30 Score=224.20 Aligned_cols=163 Identities=21% Similarity=0.199 Sum_probs=121.5
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHHHHH
Q 043760 25 NCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLHLAA 104 (345)
Q Consensus 25 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~ 104 (345)
+..|+||||.|+..|+.+.++.|+++|.++ +. +..|.||||+|+..|+.+++++|++.|+++ +..|..|.||||+|+
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~-~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~ 78 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRV-KF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDP-SLPNDEGITALHNAV 78 (239)
T ss_dssp -------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSC-CCCCTTSCCHHHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCc-cc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHH
Confidence 346999999999999999999999999987 54 578899999999999999999999999998 889999999999999
Q ss_pred HcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhcCCccccccC
Q 043760 105 MRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTSTAIEVNAVT 184 (345)
Q Consensus 105 ~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n 184 (345)
..|+.+++++|++++++ ++.+|..|+||||+|+..|+.+++++|+++ |++++.+|
T Consensus 79 ~~g~~~~v~~Ll~~ga~------------------------~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~~ 133 (239)
T 1ycs_B 79 CAGHTEIVKFLVQFGVN------------------------VNAADSDGWTPLHCAASCNNVQVCKFLVES-GAAVFAMT 133 (239)
T ss_dssp HHTCHHHHHHHHHHTCC------------------------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCC
T ss_pred HcCCHHHHHHHHHcCCC------------------------CCccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCcceec
Confidence 99999999999999998 899999999999999999999999999999 99999999
Q ss_pred CCCC-cHHHHH--HhcCCCCchhhHHHHHHHccccccc
Q 043760 185 ANGF-TAWDIL--AQSKRDIKDWDTGELLRRAGAISAK 219 (345)
Q Consensus 185 ~~g~-T~L~~a--~~~~~~~~~~~i~~~L~~~ga~~~~ 219 (345)
..|. ||||+| +. .++.+++++|++.|++...
T Consensus 134 ~~~~~t~l~~a~~~~----~g~~~~~~~Ll~~~a~~~~ 167 (239)
T 1ycs_B 134 YSDMQTAADKCEEME----EGYTQCSQFLYGVQEKMGI 167 (239)
T ss_dssp SSSCCCHHHHCCSSS----TTCCCHHHHHHHHHHHTTT
T ss_pred CCCCcchHHHHHHhh----hccHHHHHHHHHhhhcccc
Confidence 8887 999998 44 6789999999999998754
No 60
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.97 E-value=6.8e-30 Score=227.58 Aligned_cols=166 Identities=26% Similarity=0.291 Sum_probs=151.3
Q ss_pred CCCHHHHHHHHhcCCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHH
Q 043760 2 AGSVNTLLELRQQDPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKAL 81 (345)
Q Consensus 2 ~g~~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~L 81 (345)
.|+.++|+.|++.++++... |..|.||||+|+..|+.+++++|+++++++ +..|..|.||||+|+..|+.++++.+
T Consensus 83 ~g~~~~v~~Ll~~ga~~~~~---~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~l 158 (299)
T 1s70_B 83 DDNVDMVKFLVENGANINQP---DNEGWIPLHAAASCGYLDIAEYLISQGAHV-GAVNSEGDTPLDIAEEEAMEELLQNE 158 (299)
T ss_dssp TTCHHHHHHHHHTTCCTTCC---CTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHCCSHHHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCCCC---CCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHhcchHHHHHHH
Confidence 58999999999999886554 889999999999999999999999999998 88899999999999999999999877
Q ss_pred Hhh-CC-------------------------CCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHH
Q 043760 82 LQV-IP-------------------------DKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEV 135 (345)
Q Consensus 82 l~~-~~-------------------------~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~ 135 (345)
+.. +. ......+..|.||||+|+..|+.+++++|++.|++
T Consensus 159 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d-------------- 224 (299)
T 1s70_B 159 VNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYD-------------- 224 (299)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCC--------------
T ss_pred HhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCC--------------
Confidence 653 22 22234677899999999999999999999999988
Q ss_pred HHHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhcCCccccccCCCCCcHHHHHHh
Q 043760 136 LLENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTSTAIEVNAVTANGFTAWDILAQ 196 (345)
Q Consensus 136 l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~ 196 (345)
++.+|..|+||||+|+..|+.+++++|++. |++++.+|..|+||||+|+.
T Consensus 225 ----------~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~-gad~~~~d~~g~t~l~~A~~ 274 (299)
T 1s70_B 225 ----------VNIKDYDGWTPLHAAAHWGKEEACRILVEN-LCDMEAVNKVGQTAFDVADE 274 (299)
T ss_dssp ----------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCTTTSCCS
T ss_pred ----------CCCcCCCCCcHHHHHHhcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHH
Confidence 899999999999999999999999999999 99999999999999999976
No 61
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=3.4e-30 Score=233.01 Aligned_cols=194 Identities=18% Similarity=0.101 Sum_probs=126.7
Q ss_pred HHHHHHHHhcCCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCC---HHHHHHH
Q 043760 5 VNTLLELRQQDPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGY---VGIVKAL 81 (345)
Q Consensus 5 ~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~---~~iv~~L 81 (345)
.++++.|++.+.++... .|..|+||||+||..|+.++|++|+++|+++ +.+|..|+||||+|+..|+ .++++.|
T Consensus 110 ~~~~~~l~~~g~dvn~~--~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~-n~~d~~g~TpLh~A~~~g~~~~~~~~~~l 186 (327)
T 1sw6_A 110 QEVNDAFPNTQLNLNIP--VDEHGNTPLHWLTSIANLELVKHLVKHGSNR-LYGDNMGESCLVKAVKSVNNYDSGTFEAL 186 (327)
T ss_dssp HHHHHHCTTSCCCSCSC--CSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TBCCTTCCCHHHHHHHSSHHHHTTCHHHH
T ss_pred HHHHHHHHhcCCCcccc--cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHhcccccHHHHHHH
Confidence 35667777777775541 3889999999999999999999999999998 8999999999999999999 6888888
Q ss_pred HhhC-CCCCcCCCCCCCcHHHHHHH----cCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCH
Q 043760 82 LQVI-PDKCSDTDVDGRNPLHLAAM----RGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTI 156 (345)
Q Consensus 82 l~~~-~~~~~~~d~~g~tpLh~A~~----~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~ 156 (345)
++.+ +++ +..|..|+||||+|+. .|+.+++++|++.+.......... .....+.+.+. .++.+|..|.||
T Consensus 187 l~~~~~~~-~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~-~i~~~~~~~g~---~~~~~~~~g~t~ 261 (327)
T 1sw6_A 187 LDYLYPCL-ILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNR-PIQSGTNEKES---KPNDKNGERKDS 261 (327)
T ss_dssp HHHHGGGG-GEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGC-CEEEC-------------------CH
T ss_pred HHhhhccc-cCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccch-HHHhhhhcccC---CcccccccCCCh
Confidence 8887 455 8899999999999999 899999999998743110000000 00000000001 144555555555
Q ss_pred HHHHHHcCCHHHHHHhhhcCCccccccCCCCCcHHHHHHhcCCCCchhhHHHHHHHccccccc
Q 043760 157 LLLAVADKQIEAIKFLTTSTAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELLRRAGAISAK 219 (345)
Q Consensus 157 Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga~~~~ 219 (345)
||+|+. +++|++. +++.+|..|+||||+|+. .++.+++++|++.||++..
T Consensus 262 L~~a~~------~~~Ll~~---~~n~~d~~G~TpLh~A~~----~g~~~~v~~Ll~~Gad~~~ 311 (327)
T 1sw6_A 262 ILENLD------LKWIIAN---MLNAQDSNGDTCLNIAAR----LGNISIVDALLDYGADPFI 311 (327)
T ss_dssp HHHHCS------HHHHHHH---TTTCCCTTSCCHHHHHHH----HCCHHHHHHHHHTTCCTTC
T ss_pred hHHHHH------HHHHHHh---CCCCCCCCCCCHHHHHHH----cCCHHHHHHHHHcCCCCcc
Confidence 555553 5555544 355555555555555555 4455555555555555433
No 62
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=2.2e-29 Score=203.94 Aligned_cols=148 Identities=26% Similarity=0.379 Sum_probs=137.8
Q ss_pred CCCHHHHHHHHhcCCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHH
Q 043760 2 AGSVNTLLELRQQDPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKAL 81 (345)
Q Consensus 2 ~g~~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~L 81 (345)
.|+.++++.|++.++++... +..|+||||+|+. |+.+++++|++.+.++ +.+|..|.||||+|+..|+.+++++|
T Consensus 15 ~g~~~~v~~Ll~~~~~~~~~---~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~L 89 (162)
T 1ihb_A 15 RGDLEQLTSLLQNNVNVNAQ---NGFGRTALQVMKL-GNPEIARRLLLRGANP-DLKDRTGFAVIHDAARAGFLDTLQTL 89 (162)
T ss_dssp HTCHHHHHHHTTSCCCTTCC---CTTSCCHHHHCCS-SCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred cCCHHHHHHHHhCCCCcccc---CccCccHHHHHHc-CcHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 58999999999999886544 8899999999999 9999999999999998 88999999999999999999999999
Q ss_pred HhhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHH
Q 043760 82 LQVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAV 161 (345)
Q Consensus 82 l~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~ 161 (345)
+++|+++ +..|..|.||||+|+..|+.+++++|++.+++. ++.+|..|.||||+|+
T Consensus 90 l~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-----------------------~~~~~~~g~t~l~~A~ 145 (162)
T 1ihb_A 90 LEFQADV-NIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASN-----------------------VGHRNHKGDTACDLAR 145 (162)
T ss_dssp HHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCC-----------------------TTCCCTTSCCHHHHHH
T ss_pred HHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCC-----------------------CCCcCCCCCcHHHHHH
Confidence 9999999 789999999999999999999999999999873 5889999999999999
Q ss_pred HcCCHHHHHHhhhcCCcc
Q 043760 162 ADKQIEAIKFLTTSTAIE 179 (345)
Q Consensus 162 ~~g~~~~v~~Ll~~~~~~ 179 (345)
..|+.+++++|+++ |+|
T Consensus 146 ~~~~~~~~~~Ll~~-GAd 162 (162)
T 1ihb_A 146 LYGRNEVVSLMQAN-GAG 162 (162)
T ss_dssp HTTCHHHHHHHHHT-C--
T ss_pred HcCCHHHHHHHHHh-CCC
Confidence 99999999999999 764
No 63
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.96 E-value=8.8e-29 Score=218.11 Aligned_cols=189 Identities=22% Similarity=0.183 Sum_probs=163.0
Q ss_pred CCCcHHHHHHHcCCHHHHHHHhcCCCCccccc-CCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHH
Q 043760 27 LSETPLHVAALLGHEDFAKEILPQKPRIAEEL-DSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLHLAAM 105 (345)
Q Consensus 27 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~-d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 105 (345)
+|.||||.|+..|+.+++++|++.++++ +.. +..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+.
T Consensus 4 ~g~~~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 81 (285)
T 1wdy_A 4 EDNHLLIKAVQNEDVDLVQQLLEGGANV-NFQEEEGGWTPLHNAVQMSREDIVELLLRHGADP-VLRKKNGATPFLLAAI 81 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHH
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCc-ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHH
Confidence 4789999999999999999999999998 555 888999999999999999999999999999 7899999999999999
Q ss_pred cCcHHHHHHHHhcCCCcccccccCCcc-------------HHHHHHhcCCccccccc----------CCCCCCHHHHHHH
Q 043760 106 RGHIDVLEELVRAKPDAASTRLIWVGS-------------TEVLLENMGDFELLNAK----------DDYGMTILLLAVA 162 (345)
Q Consensus 106 ~g~~~iv~~Ll~~~~~~~~~~~~~~~~-------------~~~l~~~~~~~~~~~~~----------d~~g~t~Lh~A~~ 162 (345)
.|+.+++++|++++++.... +..+.+ +++|++.+.+ ++.. +..|.||||+|+.
T Consensus 82 ~~~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~~~~~~~~~~~g~t~L~~A~~ 157 (285)
T 1wdy_A 82 AGSVKLLKLFLSKGADVNEC-DFYGFTAFMEAAVYGKVKALKFLYKRGAN---VNLRRKTKEDQERLRKGGATALMDAAE 157 (285)
T ss_dssp HTCHHHHHHHHHTTCCTTCB-CTTCCBHHHHHHHTTCHHHHHHHHHTTCC---TTCCCCCCHHHHHTTCCCCCHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCCCcc-CcccCCHHHHHHHhCCHHHHHHHHHhCCC---cccccccHHHHHhhccCCCcHHHHHHH
Confidence 99999999999999886433 233333 7777777666 4444 7889999999999
Q ss_pred cCCHHHHHHhhhcCCccccccCCCCCcHHHHHHhcCCCCchhhHHHHHHHccccccccc
Q 043760 163 DKQIEAIKFLTTSTAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELLRRAGAISAKDL 221 (345)
Q Consensus 163 ~g~~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga~~~~~~ 221 (345)
.|+.+++++|++..+++++.+|..|+||||+|+.........+++++|++.|++.+...
T Consensus 158 ~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~ 216 (285)
T 1wdy_A 158 KGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRG 216 (285)
T ss_dssp HTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCC
T ss_pred cCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcC
Confidence 99999999999887899999999999999999984433333889999999999876533
No 64
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.96 E-value=4e-29 Score=214.89 Aligned_cols=186 Identities=20% Similarity=0.175 Sum_probs=153.0
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHHHH
Q 043760 24 VNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLHLA 103 (345)
Q Consensus 24 ~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A 103 (345)
.|..|.|+||.|+..|+.+++++|++.+.++ +.+|..|.||||+|+..|+.+++++|+++++++....+..|.||||+|
T Consensus 5 ~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A 83 (240)
T 3eu9_A 5 IDDYSTWDIVKATQYGIYERCRELVEAGYDV-RQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWA 83 (240)
T ss_dssp CSCGGGCCHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHH
T ss_pred cccccchHHHHHHHcCChHHHHHHHHcCCCc-CCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHH
Confidence 4888999999999999999999999999987 888999999999999999999999999999998666667799999999
Q ss_pred HHcCcHHHHHHHHhcCCCcccccccCCcc-------------HHHHHHhcCCcccccccCCCCCCHHHHHHHcCC-HHHH
Q 043760 104 AMRGHIDVLEELVRAKPDAASTRLIWVGS-------------TEVLLENMGDFELLNAKDDYGMTILLLAVADKQ-IEAI 169 (345)
Q Consensus 104 ~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~-------------~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~-~~~v 169 (345)
+..|+.+++++|++.+++.... +..+.+ ++.|++.+.+ ++.+|..|.||||+|+..++ .+++
T Consensus 84 ~~~~~~~~v~~Ll~~g~~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~---~~~~~~~g~t~l~~a~~~~~~~~~~ 159 (240)
T 3eu9_A 84 TRQGHLSMVVQLMKYGADPSLI-DGEGCSCIHLAAQFGHTSIVAYLIAKGQD---VDMMDQNGMTPLMWAAYRTHSVDPT 159 (240)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHHCCSSTTH
T ss_pred HHcCCHHHHHHHHHcCCCCccc-CCCCCCHHHHHHHcCHHHHHHHHHhcCCC---ccccCCCCCcHHHHHHHhCChHHHH
Confidence 9999999999999998885432 222222 6666666555 67777778888888876655 6777
Q ss_pred HHhhhcCCccccccCC-CCCcHHHHHHhcCCCCchhhHHHHHHHccccccc
Q 043760 170 KFLTTSTAIEVNAVTA-NGFTAWDILAQSKRDIKDWDTGELLRRAGAISAK 219 (345)
Q Consensus 170 ~~Ll~~~~~~~~~~n~-~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga~~~~ 219 (345)
++|++. +++++..+. .|.||||+|+. .++.+++++|++.|+++..
T Consensus 160 ~~L~~~-~~~~~~~~~~~g~t~L~~A~~----~~~~~~v~~Ll~~g~~~~~ 205 (240)
T 3eu9_A 160 RLLLTF-NVSVNLGDKYHKNTALHWAVL----AGNTTVISLLLEAGANVDA 205 (240)
T ss_dssp HHHHHT-TCCTTCCCTTTCCCHHHHHHH----HTCHHHHHHHHHHTCCTTC
T ss_pred HHHHhc-CCCcchhhccCCCcHHHHHHH----cCCHHHHHHHHHcCCCCCC
Confidence 777777 777777776 77788888877 6777888888888877654
No 65
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=7.9e-29 Score=202.38 Aligned_cols=145 Identities=28% Similarity=0.457 Sum_probs=138.1
Q ss_pred CCCHHHHHHHHhcCCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHH
Q 043760 2 AGSVNTLLELRQQDPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKAL 81 (345)
Q Consensus 2 ~g~~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~L 81 (345)
.|++++|+.|++.+.++... |..|.||||+|+..|+.+++++|++.+.++ +.+|..|.||||+|+..|+.+++++|
T Consensus 24 ~g~~~~v~~Ll~~g~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~L 99 (169)
T 2y1l_E 24 AGRDDEVRILMANGADVNAE---DASGWTPLHLAAFNGHLEIVEVLLKNGADV-NAVDHAGMTPLRLAALFGHLEIVEVL 99 (169)
T ss_dssp HTCHHHHHHHHHTTCCTTCC---CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCCCC---CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 58999999999999886554 889999999999999999999999999998 88999999999999999999999999
Q ss_pred HhhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHH
Q 043760 82 LQVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAV 161 (345)
Q Consensus 82 l~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~ 161 (345)
+++|+++ +..|..|.||||+|+..|+.+++++|++++++ ++.+|..|.||||+|+
T Consensus 100 l~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------------------~~~~~~~g~t~l~~A~ 154 (169)
T 2y1l_E 100 LKNGADV-NANDMEGHTPLHLAAMFGHLEIVEVLLKNGAD------------------------VNAQDKFGKTAFDISI 154 (169)
T ss_dssp HHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------------------------TTCCCTTSCCHHHHHH
T ss_pred HHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------------------CCCcCCCCCCHHHHHH
Confidence 9999999 78999999999999999999999999999998 8899999999999999
Q ss_pred HcCCHHHHHHhhhc
Q 043760 162 ADKQIEAIKFLTTS 175 (345)
Q Consensus 162 ~~g~~~~v~~Ll~~ 175 (345)
..|+.+++++|++.
T Consensus 155 ~~~~~~~~~~L~~~ 168 (169)
T 2y1l_E 155 DNGNEDLAEILQKL 168 (169)
T ss_dssp HTTCHHHHHHHHTC
T ss_pred HhCCHHHHHHHHHc
Confidence 99999999999986
No 66
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.96 E-value=4e-30 Score=226.40 Aligned_cols=167 Identities=22% Similarity=0.269 Sum_probs=143.3
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHhc----CCCCccc---ccCCCCchHHHHHHHc---CCHHHHHHHHhhCCCCC---
Q 043760 23 TVNCLSETPLHVAALLGHEDFAKEILP----QKPRIAE---ELDSRKSSALHIASQK---GYVGIVKALLQVIPDKC--- 89 (345)
Q Consensus 23 ~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~----~~~~~~~---~~d~~g~tpLh~A~~~---g~~~iv~~Ll~~~~~~~--- 89 (345)
..|..|+||||+||..|+.++++.|++ .+.++.. ..|..|+||||+|+.. |+.+++++|+++|++..
T Consensus 8 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~ 87 (273)
T 2pnn_A 8 PPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLK 87 (273)
T ss_dssp ---CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHH
T ss_pred CCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchh
Confidence 348899999999999999999988886 4544411 4588999999999987 99999999999986531
Q ss_pred -------cCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCC-----------
Q 043760 90 -------SDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDD----------- 151 (345)
Q Consensus 90 -------~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~----------- 151 (345)
...|..|.||||+|+..|+.+++++|+++|++ ++.++.
T Consensus 88 ~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~------------------------~~~~~~~~~~~~~~~~~ 143 (273)
T 2pnn_A 88 QFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGAD------------------------VQAAANGDFFKKTKGRP 143 (273)
T ss_dssp HHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC------------------------TTCCBCSGGGSSCSSSC
T ss_pred HHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCC------------------------cCccccccccccccccc
Confidence 22567899999999999999999999999998 555554
Q ss_pred ---CCCCHHHHHHHcCCHHHHHHhhh---cCCccccccCCCCCcHHHHHHhcCCCCch---------hhHHHHHHHcccc
Q 043760 152 ---YGMTILLLAVADKQIEAIKFLTT---STAIEVNAVTANGFTAWDILAQSKRDIKD---------WDTGELLRRAGAI 216 (345)
Q Consensus 152 ---~g~t~Lh~A~~~g~~~~v~~Ll~---~~~~~~~~~n~~g~T~L~~a~~~~~~~~~---------~~i~~~L~~~ga~ 216 (345)
.|.||||+|+..|+.+++++|++ . |++++.+|..|+||||+|+. .++ .+++++|++.|++
T Consensus 144 ~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~-gad~~~~d~~g~tpLh~A~~----~~~~~~~~~~~~~~~v~~Ll~~ga~ 218 (273)
T 2pnn_A 144 GFYFGELPLSLAACTNQLAIVKFLLQNSWQ-PADISARDSVGNTVLHALVE----VADNTVDNTKFVTSMYNEILILGAK 218 (273)
T ss_dssp CCCSCBSHHHHHHHTTCHHHHHHHHHCSSC-CCCTTCCCTTSCCHHHHHHH----HCCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHhcccC-CCCceeeCCCCCcHHHHHHH----ccCcchhHHHHHHHHHHHHHHhhhh
Confidence 89999999999999999999999 6 99999999999999999998 333 6899999999998
Q ss_pred cc
Q 043760 217 SA 218 (345)
Q Consensus 217 ~~ 218 (345)
.+
T Consensus 219 ~n 220 (273)
T 2pnn_A 219 LH 220 (273)
T ss_dssp HC
T ss_pred cc
Confidence 75
No 67
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=6.9e-29 Score=204.61 Aligned_cols=157 Identities=22% Similarity=0.238 Sum_probs=146.3
Q ss_pred CCCHHHHHHHHhcCCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHH
Q 043760 2 AGSVNTLLELRQQDPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKAL 81 (345)
Q Consensus 2 ~g~~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~L 81 (345)
.|+.++|+.|++.++...+. .+..|+||||+|+..|+.+++++|++.+.++ +.+|..|.||||+|+..|+.+++++|
T Consensus 15 ~g~~~~v~~ll~~~~~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~L 91 (179)
T 3f6q_A 15 EGNAVAVRLWLDNTENDLNQ--GDDHGFSPLHWACREGRSAVVEMLIMRGARI-NVMNRGDDTPLHLAASHGHRDIVQKL 91 (179)
T ss_dssp HTCHHHHHHHHHCTTSCTTC--CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred cCCHHHHHHHHhcCcccccc--cCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 58999999999986654333 4889999999999999999999999999998 88999999999999999999999999
Q ss_pred HhhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHH
Q 043760 82 LQVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAV 161 (345)
Q Consensus 82 l~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~ 161 (345)
+++|+++ +..|..|.||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+
T Consensus 92 l~~g~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~------------------------~~~~~~~g~tpl~~A~ 146 (179)
T 3f6q_A 92 LQYKADI-NAVNEHGNVPLHYACFWGQDQVAEDLVANGAL------------------------VSICNKYGEMPVDKAK 146 (179)
T ss_dssp HHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------------------------SSBCCTTSCCGGGGSC
T ss_pred HHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC------------------------cchhccCCCCcHHHHH
Confidence 9999999 88999999999999999999999999999998 8899999999999999
Q ss_pred HcCCHHHHHHhhhcCCccccccCCCC
Q 043760 162 ADKQIEAIKFLTTSTAIEVNAVTANG 187 (345)
Q Consensus 162 ~~g~~~~v~~Ll~~~~~~~~~~n~~g 187 (345)
..++.+++++|++. |++++..+.++
T Consensus 147 ~~~~~~~~~~L~~~-g~~~~~~~~~~ 171 (179)
T 3f6q_A 147 APLRELLRERAEKM-GQNLNRIPYKD 171 (179)
T ss_dssp HHHHHHHHHHHHHT-TCCCSCBCCCC
T ss_pred HHHHHHHHHHHHHh-hcCcccCCccc
Confidence 99999999999999 88999877665
No 68
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=1.3e-28 Score=200.52 Aligned_cols=148 Identities=26% Similarity=0.300 Sum_probs=139.4
Q ss_pred CCCHHHHHHHHhcCCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHH
Q 043760 2 AGSVNTLLELRQQDPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKAL 81 (345)
Q Consensus 2 ~g~~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~L 81 (345)
.|+.++++.|++.+.++... |..|.||||+|+..|+.+++++|++.+.++ +..|..|.||||+|+..|+.+++++|
T Consensus 13 ~g~~~~v~~ll~~~~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~L 88 (167)
T 3v31_A 13 QGEMLYLATRIEQENVINHT---DEEGFTPLMWAAAHGQIAVVEFLLQNGADP-QLLGKGRESALSLACSKGYTDIVKML 88 (167)
T ss_dssp TTCHHHHHHHHHHSSCTTCC---CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCcCCC---CCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCCHHHHHHH
Confidence 68999999999998775443 889999999999999999999999999998 88899999999999999999999999
Q ss_pred HhhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHH
Q 043760 82 LQVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAV 161 (345)
Q Consensus 82 l~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~ 161 (345)
+++|+++ +..|..|.||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+
T Consensus 89 l~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------------------~~~~~~~g~t~l~~A~ 143 (167)
T 3v31_A 89 LDCGVDV-NEYDWNGGTPLLYAVHGNHVKCVKMLLESGAD------------------------PTIETDSGYNSMDLAV 143 (167)
T ss_dssp HHHTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------------------------TTCCCTTSCCHHHHHH
T ss_pred HHCCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------------------CCCcCCCCCCHHHHHH
Confidence 9999999 78999999999999999999999999999998 8889999999999999
Q ss_pred HcCCHHHHHHhhhcCCcc
Q 043760 162 ADKQIEAIKFLTTSTAIE 179 (345)
Q Consensus 162 ~~g~~~~v~~Ll~~~~~~ 179 (345)
..|+.+++++|+++ +.+
T Consensus 144 ~~~~~~~~~~L~~~-~~~ 160 (167)
T 3v31_A 144 ALGYRSVQQVIESH-LLK 160 (167)
T ss_dssp HHTCHHHHHHHHHH-HHH
T ss_pred HcCcHHHHHHHHHH-HHH
Confidence 99999999999988 444
No 69
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=3.6e-31 Score=227.19 Aligned_cols=176 Identities=17% Similarity=0.119 Sum_probs=150.8
Q ss_pred HHHHHhcCCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHHHhhCCC
Q 043760 8 LLELRQQDPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKALLQVIPD 87 (345)
Q Consensus 8 v~~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~ 87 (345)
|+.|++++.+.......+..|.||||+|+..|+.+++++|++.+.++ +.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~ 79 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDP-SQPNEEGITALHNAICGANYSIVDFLITAGAN 79 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 46788888877666556778899999999999999999999999988 88999999999999999999999999999999
Q ss_pred CCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccC-CCCCCHHHHH--HHcC
Q 043760 88 KCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKD-DYGMTILLLA--VADK 164 (345)
Q Consensus 88 ~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d-~~g~t~Lh~A--~~~g 164 (345)
+ +..|..|+||||+|+..|+.+++++|++.|++ ++.++ ..|+||||+| +..|
T Consensus 80 ~-n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~------------------------~~~~~~~~g~tpL~~A~a~~~~ 134 (229)
T 2vge_A 80 V-NSPDSHGWTPLHCAASCNDTVICMALVQHGAA------------------------IFATTLSDGATAFEKCDPYREG 134 (229)
T ss_dssp T-TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC------------------------TTCCCSSTTCCTGGGCCTTSTT
T ss_pred C-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------------------cccccCCCCCCHHHHHHHHhcC
Confidence 9 88999999999999999999999999999998 78776 6999999999 9999
Q ss_pred CHHHHHHhhhcCCccccccCCCCCcHHHHHHhcCCCCchhhHHHHHHHccccc
Q 043760 165 QIEAIKFLTTSTAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELLRRAGAIS 217 (345)
Q Consensus 165 ~~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga~~ 217 (345)
+.+++++|++. |++++.+|..|.||++.++.. . ..++|++.|++.
T Consensus 135 ~~~~v~~Ll~~-ga~~~~~~~~~~~~l~~~~~~----~---~~~~ll~~ga~~ 179 (229)
T 2vge_A 135 YADCATYLADV-EQSMGLMNSGAVYALWDYSAE----F---GDELSFREGESV 179 (229)
T ss_dssp HHHHHHHHHHH-HHHTTTSGGGEEEESSCBCCS----S---TTBCCBCTTCEE
T ss_pred hHHHHHHHHHc-CCCcccccCCchHHHHHHhhc----c---ccccCccccccc
Confidence 99999999999 899999999999999865552 1 225678888874
No 70
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=2.2e-28 Score=196.31 Aligned_cols=141 Identities=23% Similarity=0.326 Sum_probs=134.0
Q ss_pred CCCHHHHHHHHhcCCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHH
Q 043760 2 AGSVNTLLELRQQDPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKAL 81 (345)
Q Consensus 2 ~g~~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~L 81 (345)
.|+.++++.|++.++++. .+..|.||||+|+..|+.+++++|++.+.++ +.+|..|.||||+|+..|+.+++++|
T Consensus 12 ~g~~~~v~~Ll~~g~~~~----~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~L 86 (153)
T 1awc_B 12 AGQDDEVRILMANGAPFT----TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR-DARTKVDRTPLHMAASEGHANIVEVL 86 (153)
T ss_dssp HTCHHHHHHHHHHTCCCC----CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCCC----cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcChHHHHHHH
Confidence 589999999999998643 3888999999999999999999999999998 88999999999999999999999999
Q ss_pred HhhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHH
Q 043760 82 LQVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAV 161 (345)
Q Consensus 82 l~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~ 161 (345)
+++|+++ +..|..|.||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+
T Consensus 87 l~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~------------------------~~~~~~~g~t~l~~A~ 141 (153)
T 1awc_B 87 LKHGADV-NAKDMLKMTALHWATEHNHQEVVELLIKYGAD------------------------VHTQSKFCKTAFDISI 141 (153)
T ss_dssp HTTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------------------------TTCCCTTSCCHHHHHH
T ss_pred HHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------------------ccccCCCCCCHHHHHH
Confidence 9999999 78999999999999999999999999999998 8899999999999999
Q ss_pred HcCCHHHHHHh
Q 043760 162 ADKQIEAIKFL 172 (345)
Q Consensus 162 ~~g~~~~v~~L 172 (345)
..|+.+++++|
T Consensus 142 ~~~~~~i~~~L 152 (153)
T 1awc_B 142 DNGNEDLAEIL 152 (153)
T ss_dssp HTTCHHHHHHH
T ss_pred HcCCHHHHHHh
Confidence 99999999987
No 71
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.96 E-value=2.2e-29 Score=202.96 Aligned_cols=142 Identities=20% Similarity=0.174 Sum_probs=119.8
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCc-HHHHH
Q 043760 25 NCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRN-PLHLA 103 (345)
Q Consensus 25 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t-pLh~A 103 (345)
+..|.||||+|+..|+.+++++|++.+.++ +.+|..|+||||+|+ .|+.+++++|+++|+++ +..|..|.| |||+|
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~-~~~d~~g~ttpL~~A 85 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAGANP-NAPNSYGRRPIQVMM-MGSARVAELLLLHGAEP-NCADPATLTRPVHDA 85 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTTCCT-TCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCC-CCCCTTTCCCHHHHH
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHH
Confidence 678999999999999999999999999988 889999999999986 99999999999999999 889999999 99999
Q ss_pred HHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhcCCcccccc
Q 043760 104 AMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTSTAIEVNAV 183 (345)
Q Consensus 104 ~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~ 183 (345)
+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++ |++++.+
T Consensus 86 ~~~~~~~~v~~Ll~~ga~------------------------~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~-ga~~~~~ 140 (156)
T 1bi7_B 86 AREGFLDTLVVLHRAGAR------------------------LDVRDAWGRLPVDLAEELGHRDVARYLRAA-AGGTRGS 140 (156)
T ss_dssp HHHTCHHHHHHHHHHTCC------------------------SSCCCTTCCCHHHHHHHHTCHHHHHHHSSC-C------
T ss_pred HHCCCHHHHHHHHHcCCC------------------------CcccCCCCCCHHHHHHHhCHHHHHHHHHHc-CCCCCcc
Confidence 999999999999999998 899999999999999999999999999999 9999999
Q ss_pred CCCCCcHHHHH
Q 043760 184 TANGFTAWDIL 194 (345)
Q Consensus 184 n~~g~T~L~~a 194 (345)
|..|.||.+-+
T Consensus 141 ~~~g~t~~~~~ 151 (156)
T 1bi7_B 141 NHARIDAAEGP 151 (156)
T ss_dssp -----------
T ss_pred CcCcCcccccC
Confidence 99999998744
No 72
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=1.8e-29 Score=220.52 Aligned_cols=168 Identities=21% Similarity=0.227 Sum_probs=142.0
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHh----cCCCCcccccC----CCCchHHHHHH---HcCCHHHHHHHHhhCCCC-----
Q 043760 25 NCLSETPLHVAALLGHEDFAKEIL----PQKPRIAEELD----SRKSSALHIAS---QKGYVGIVKALLQVIPDK----- 88 (345)
Q Consensus 25 ~~~g~t~Lh~Aa~~g~~~~v~~Ll----~~~~~~~~~~d----~~g~tpLh~A~---~~g~~~iv~~Ll~~~~~~----- 88 (345)
+..|+|+||.|+..|+.+.++.|+ +.+.++ +..+ ..|.||||+|+ ..|+.+++++|++.|++.
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~-~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~ 80 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRL-TDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMRE 80 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCT-TSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCc-chhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHh
Confidence 567999999999999999555444 488877 5444 77999999999 779999999999987542
Q ss_pred -----CcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccC-------------
Q 043760 89 -----CSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKD------------- 150 (345)
Q Consensus 89 -----~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d------------- 150 (345)
....|..|+||||+|+..|+.+++++|++.|++ ++.++
T Consensus 81 ~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~------------------------~~~~~~~~~~~~~~~~~~ 136 (260)
T 3jxi_A 81 FINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGAD------------------------VHAQARGRFFQPKDEGGY 136 (260)
T ss_dssp HHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCC------------------------TTCCCEECCCSSSCCCCS
T ss_pred hhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCC------------------------cCccccccccCccccccc
Confidence 134556899999999999999999999999998 56666
Q ss_pred -CCCCCHHHHHHHcCCHHHHHHhhh---cCCccccccCCCCCcHHHHHHhcCCCCc-----hhhHHHHHHHcccccc
Q 043760 151 -DYGMTILLLAVADKQIEAIKFLTT---STAIEVNAVTANGFTAWDILAQSKRDIK-----DWDTGELLRRAGAISA 218 (345)
Q Consensus 151 -~~g~t~Lh~A~~~g~~~~v~~Ll~---~~~~~~~~~n~~g~T~L~~a~~~~~~~~-----~~~i~~~L~~~ga~~~ 218 (345)
..|.||||+|+..|+.+++++|++ . |++++.+|..|+||||+|+....... ..+++++|++.|++..
T Consensus 137 ~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~-ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~ 212 (260)
T 3jxi_A 137 FYFGELPLSLAACTNQPHIVHYLTENGHK-QADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLF 212 (260)
T ss_dssp CCSCSSHHHHHHHTTCHHHHHHHHHCSSC-CCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHhcccc-CCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccc
Confidence 689999999999999999999999 6 99999999999999999997321110 1589999999999873
No 73
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.96 E-value=1.2e-28 Score=194.00 Aligned_cols=124 Identities=22% Similarity=0.259 Sum_probs=79.3
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCC-CCcHHHHH
Q 043760 25 NCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVD-GRNPLHLA 103 (345)
Q Consensus 25 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~-g~tpLh~A 103 (345)
+..|.||||+|+..|+.+++++|++.+.++ +.+|..|+||||+|+. |+.+++++|+++|+++ +..|.. |.||||+|
T Consensus 9 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~~g~t~L~~A 85 (136)
T 1d9s_A 9 GGSSDAGLATAAARGQVETVRQLLEAGADP-NALNRFGRRPIQVMMM-GSAQVAELLLLHGAEP-NCADPATLTRPVHDA 85 (136)
T ss_dssp CCCCSCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCS-SCCBTTTTBCHHHHH
T ss_pred CCCCccHHHHHHHcCCHHHHHHHHHcCCCc-CCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCC-CCcCCCCCCCHHHHH
Confidence 556666666666666666666666666655 5566666666666666 6666666666666665 555555 66666666
Q ss_pred HHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhc
Q 043760 104 AMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTS 175 (345)
Q Consensus 104 ~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ 175 (345)
+..|+.+++++|++++++ ++.+|..|.||||+|+..++.+++++|+++
T Consensus 86 ~~~~~~~~v~~Ll~~ga~------------------------~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ 133 (136)
T 1d9s_A 86 AREGFLDTLVVLHRAGAR------------------------LDVCDAWGRLPVDLAEEQGHRDIARYLHAA 133 (136)
T ss_dssp HHHTCHHHHHHHHHTCCC------------------------CCCCSSSSSCHHHHHHHHTCHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCC------------------------CCccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 666666666666666655 556666666666666666666666666665
No 74
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=4.3e-28 Score=197.02 Aligned_cols=145 Identities=23% Similarity=0.237 Sum_probs=134.8
Q ss_pred CCCHHHHHHHHhcCCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHH
Q 043760 2 AGSVNTLLELRQQDPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKAL 81 (345)
Q Consensus 2 ~g~~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~L 81 (345)
.|+++.++.|++.++.... ..+..|.||||+|+..|+.+++++|++.+.++ +.+|..|+||||+|+..|+.+++++|
T Consensus 18 ~g~~~~v~~ll~~~~~~~~--~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~L 94 (165)
T 3twr_A 18 AGDVETVKKLCTVQSVNCR--DIEGRQSTPLHFAAGYNRVSVVEYLLQHGADV-HAKDKGGLVPLHNACSYGHYEVAELL 94 (165)
T ss_dssp HTCHHHHHHHCCTTTTTCC--CTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred hCCHHHHHHHHHcCCCCcc--ccccCCCCHHHHHHHcChHHHHHHHHhcCCCC-CccCCCCCCHHHHHHHcCcHHHHHHH
Confidence 5899999999997654332 34788999999999999999999999999998 88999999999999999999999999
Q ss_pred HhhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHH
Q 043760 82 LQVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAV 161 (345)
Q Consensus 82 l~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~ 161 (345)
+++|+++ +..|..|.||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+
T Consensus 95 l~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~------------------------~~~~~~~g~t~l~~a~ 149 (165)
T 3twr_A 95 VKHGAVV-NVADLWKFTPLHEAAAKGKYEICKLLLQHGAD------------------------PTKKNRDGNTPLDLVK 149 (165)
T ss_dssp HHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC------------------------TTCCCTTSCCTGGGSC
T ss_pred HhCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------------------CcccCCCCCChhHhHh
Confidence 9999999 78999999999999999999999999999998 8999999999999987
Q ss_pred HcCCHHHHHHhhhc
Q 043760 162 ADKQIEAIKFLTTS 175 (345)
Q Consensus 162 ~~g~~~~v~~Ll~~ 175 (345)
. |+.+++++|++.
T Consensus 150 ~-~~~~i~~~L~~~ 162 (165)
T 3twr_A 150 D-GDTDIQDLLRGD 162 (165)
T ss_dssp T-TCHHHHHHHHTC
T ss_pred c-CChHHHHHHhhc
Confidence 7 999999999988
No 75
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=4.5e-28 Score=201.95 Aligned_cols=145 Identities=21% Similarity=0.254 Sum_probs=137.6
Q ss_pred CCCHHHHHHHHhcCCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHH
Q 043760 2 AGSVNTLLELRQQDPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKAL 81 (345)
Q Consensus 2 ~g~~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~L 81 (345)
.|+.++++.|++.++++... +..|+||||+|+..|+.+++++|++.++++ +.+|..|.||||+|+..|+.+++++|
T Consensus 45 ~g~~~~v~~Ll~~~~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~L 120 (192)
T 2rfm_A 45 LGMENAIDKLVENFDKLEDK---DIEGSTALIWAVKNNRLGIAEKLLSKGSNV-NTKDFSGKTPLMWSIIFGYSEMSYFL 120 (192)
T ss_dssp HTCGGGHHHHHHHHCCTTCC---CTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred cCCHHHHHHHHHhccccccc---cccCccHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcCCHHHHHHH
Confidence 47899999999998876544 888999999999999999999999999998 88999999999999999999999999
Q ss_pred HhhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHH
Q 043760 82 LQVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAV 161 (345)
Q Consensus 82 l~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~ 161 (345)
+++|+++ +..|..|.||||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+
T Consensus 121 l~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~------------------------~~~~~~~g~t~l~~A~ 175 (192)
T 2rfm_A 121 LEHGANV-NDRNLEGETPLIVASKYGRSEIVKKLLELGAD------------------------ISARDLTGLTAEASAR 175 (192)
T ss_dssp HHTTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC------------------------TTCBCTTSCBHHHHHH
T ss_pred HHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC------------------------CCCcCCCCCCHHHHHH
Confidence 9999999 88999999999999999999999999999998 8899999999999999
Q ss_pred HcCCHHHHHHhhhc
Q 043760 162 ADKQIEAIKFLTTS 175 (345)
Q Consensus 162 ~~g~~~~v~~Ll~~ 175 (345)
..|+.+++++|++.
T Consensus 176 ~~~~~~~v~~Ll~~ 189 (192)
T 2rfm_A 176 IFGRQEVIKIFTEV 189 (192)
T ss_dssp HTTCHHHHHHHHHH
T ss_pred HhCcHHHHHHHHhc
Confidence 99999999999987
No 76
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.95 E-value=2.3e-28 Score=192.33 Aligned_cols=133 Identities=22% Similarity=0.256 Sum_probs=126.9
Q ss_pred CCcccccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCc
Q 043760 52 PRIAEELDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVG 131 (345)
Q Consensus 52 ~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~ 131 (345)
+++ +.+|..|.||||+|+..|+.+++++|+++|+++ +..|..|+||||+|+. |+.+++++|++.+++
T Consensus 3 ~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~---------- 69 (136)
T 1d9s_A 3 PGI-HMLGGSSDAGLATAAARGQVETVRQLLEAGADP-NALNRFGRRPIQVMMM-GSAQVAELLLLHGAE---------- 69 (136)
T ss_dssp CCC-SCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCC----------
T ss_pred CCc-cCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCc-CCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCC----------
Confidence 344 788999999999999999999999999999998 7899999999999999 999999999999998
Q ss_pred cHHHHHHhcCCcccccccCCC-CCCHHHHHHHcCCHHHHHHhhhcCCccccccCCCCCcHHHHHHhcCCCCchhhHHHHH
Q 043760 132 STEVLLENMGDFELLNAKDDY-GMTILLLAVADKQIEAIKFLTTSTAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELL 210 (345)
Q Consensus 132 ~~~~l~~~~~~~~~~~~~d~~-g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L 210 (345)
++.+|.. |+||||+|+..|+.+++++|++. |++++.+|..|+||||+|+. .++.+++++|
T Consensus 70 --------------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~----~~~~~~~~~L 130 (136)
T 1d9s_A 70 --------------PNCADPATLTRPVHDAAREGFLDTLVVLHRA-GARLDVCDAWGRLPVDLAEE----QGHRDIARYL 130 (136)
T ss_dssp --------------SSCCBTTTTBCHHHHHHHHTCHHHHHHHHHT-CCCCCCCSSSSSCHHHHHHH----HTCHHHHHHH
T ss_pred --------------CCCcCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHH----cCCHHHHHHH
Confidence 8999999 99999999999999999999999 89999999999999999999 7889999999
Q ss_pred HHcccc
Q 043760 211 RRAGAI 216 (345)
Q Consensus 211 ~~~ga~ 216 (345)
+++||+
T Consensus 131 l~~Gad 136 (136)
T 1d9s_A 131 HAATGD 136 (136)
T ss_dssp HHHHCC
T ss_pred HHcCCC
Confidence 999985
No 77
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=1.2e-27 Score=192.46 Aligned_cols=143 Identities=27% Similarity=0.392 Sum_probs=132.6
Q ss_pred CCCHHHHHHHHhcCC-ccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHH
Q 043760 2 AGSVNTLLELRQQDP-LILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKA 80 (345)
Q Consensus 2 ~g~~~~v~~ll~~~~-~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~ 80 (345)
.|+.+.++.|++..+ ++ ...+..|+||||+ +..|+.+++++|++.+.++ +.+|..|.||||+|+..|+.+++++
T Consensus 12 ~g~~~~v~~ll~~~~~~~---~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~ 86 (156)
T 1bd8_A 12 RGDVQEVRRLLHRELVHP---DALNRFGKTALQV-MMFGSTAIALELLKQGASP-NVQDTSGTSPVHDAARTGFLDTLKV 86 (156)
T ss_dssp HTCHHHHHHHHHTTCCCT---TCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred hCCHHHHHHHHHhhCcCc---cccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCcHHHHHH
Confidence 589999999999832 32 2348899999999 9999999999999999998 8899999999999999999999999
Q ss_pred HHhhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHH
Q 043760 81 LLQVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLA 160 (345)
Q Consensus 81 Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A 160 (345)
|+++|+++ +..|..|.||||+|+..|+.+++++|++. ++ ++.+|..|.||||+|
T Consensus 87 Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~------------------------~~~~~~~g~t~l~~A 140 (156)
T 1bd8_A 87 LVEHGADV-NVPDGTGALPIHLAVQEGHTAVVSFLAAE-SD------------------------LHRRDARGLTPLELA 140 (156)
T ss_dssp HHHTTCCS-CCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SC------------------------TTCCCTTSCCHHHHH
T ss_pred HHHcCCCC-CCcCCCCCcHHHHHHHhChHHHHHHHHhc-cC------------------------CCCcCCCCCCHHHHH
Confidence 99999999 88999999999999999999999999998 66 889999999999999
Q ss_pred HHcCCHHHHHHhhhc
Q 043760 161 VADKQIEAIKFLTTS 175 (345)
Q Consensus 161 ~~~g~~~~v~~Ll~~ 175 (345)
+..|+.+++++|+++
T Consensus 141 ~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 141 LQRGAQDLVDILQGH 155 (156)
T ss_dssp HHSCCHHHHHHHHTT
T ss_pred HHcCcHHHHHHHHhh
Confidence 999999999999975
No 78
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.95 E-value=1.1e-28 Score=204.72 Aligned_cols=158 Identities=13% Similarity=0.044 Sum_probs=140.5
Q ss_pred CCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCH----HHHHHHHhhCCCCCcCCCCCCCcHHHHH
Q 043760 28 SETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYV----GIVKALLQVIPDKCSDTDVDGRNPLHLA 103 (345)
Q Consensus 28 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~----~iv~~Ll~~~~~~~~~~d~~g~tpLh~A 103 (345)
+.++|+.|++.|+.+.++.++..+.+. ..+..|+||||+|+..|+. +++++|+++|+++ +.+|..|+||||+|
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~~--~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~TpLh~a 82 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYED--KESVLKSNILYDVLRNNNDEARYKISMFLINKGADI-KSRTKEGTTLFFPL 82 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSSC--HHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS-SCCCTTCCCTHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCccc--ccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC-CCCCCCCCcHHHHH
Confidence 568999999999999999999877543 2237799999999999975 5999999999999 89999999999999
Q ss_pred HHcCc------HHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCC-CHHHHHHHcC-----CHHHHHH
Q 043760 104 AMRGH------IDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGM-TILLLAVADK-----QIEAIKF 171 (345)
Q Consensus 104 ~~~g~------~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~-t~Lh~A~~~g-----~~~~v~~ 171 (345)
+..|+ .+++++|++.|++ +|.+|..|+ ||||+|+..+ +.+++++
T Consensus 83 ~~~~~~~~~~~~~iv~~Ll~~Gad------------------------in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~ 138 (186)
T 3t8k_A 83 FQGGGNDITGTTELCKIFLEKGAD------------------------ITALYKPYKIVVFKNIFNYFVDENEMIPLYKL 138 (186)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCC------------------------SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHH
T ss_pred HHcCCcchhhHHHHHHHHHHCCCC------------------------CCccCCCcCchHHHHHHHcCCChhhHHHHHHH
Confidence 99987 6889999999999 999999999 9999999954 4569999
Q ss_pred hhhcCCccccccCCCCCcHHHHHHhcCCCCchhhHHHHHHHcccc
Q 043760 172 LTTSTAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELLRRAGAI 216 (345)
Q Consensus 172 Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga~ 216 (345)
|++..|++++.+|..|+||||+|+. .++.+++++|.+...+
T Consensus 139 Ll~~~gad~~~~d~~G~TpL~~A~~----~~~~~~v~~L~~~~~~ 179 (186)
T 3t8k_A 139 IFSQSGLQLLIKDKWGLTALEFVKR----CQKPIALKMMEDYIKK 179 (186)
T ss_dssp HHTSTTCCTTCCCTTSCCHHHHHHT----TTCHHHHHHHHHHHHH
T ss_pred HHHhcCCCCcccCCCCCCHHHHHHH----cCCHHHHHHHHHHHHH
Confidence 9993399999999999999999999 8889999999876543
No 79
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.95 E-value=2.1e-28 Score=221.25 Aligned_cols=158 Identities=18% Similarity=0.113 Sum_probs=132.2
Q ss_pred CCCHHHHHHHHhcCCccccCCCCCCCCCcHHHHHHHcCC---HHHHHHHhcCCCCcccccCCCCchHHHHHHH----cCC
Q 043760 2 AGSVNTLLELRQQDPLILERPTVNCLSETPLHVAALLGH---EDFAKEILPQKPRIAEELDSRKSSALHIASQ----KGY 74 (345)
Q Consensus 2 ~g~~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~---~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~----~g~ 74 (345)
.|+.++|+.|++.++++... |..|+||||+|+..|+ .++++.|++.+...++.+|..|+||||+|+. .|+
T Consensus 141 ~g~~~~v~~Ll~~Gad~n~~---d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~ 217 (327)
T 1sw6_A 141 IANLELVKHLVKHGSNRLYG---DNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGC 217 (327)
T ss_dssp TTCHHHHHHHHHTTCCTTBC---CTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTC
T ss_pred cCCHHHHHHHHHcCCCCCCc---CCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHcccccc
Confidence 58999999999999887654 8999999999999998 6777777777633348999999999999999 899
Q ss_pred HHHHHHHHhh--------------------CCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHH
Q 043760 75 VGIVKALLQV--------------------IPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTE 134 (345)
Q Consensus 75 ~~iv~~Ll~~--------------------~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~ 134 (345)
.+++++|++. |+++ +..+..|.||||.|+. +++|++. +
T Consensus 218 ~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~-~~~~~~g~t~L~~a~~------~~~Ll~~--~------------- 275 (327)
T 1sw6_A 218 SAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKP-NDKNGERKDSILENLD------LKWIIAN--M------------- 275 (327)
T ss_dssp HHHHHHHHHHHHHHHHHGGGCCEEEC-----------------CHHHHHCS------HHHHHHH--T-------------
T ss_pred HHHHHHHHHHHHHHHhcccchHHHhhhhcccCCc-ccccccCCChhHHHHH------HHHHHHh--C-------------
Confidence 9999999987 7788 7889999999999985 8888887 3
Q ss_pred HHHHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhcCCccccccCCCCCcHHHHHHh
Q 043760 135 VLLENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTSTAIEVNAVTANGFTAWDILAQ 196 (345)
Q Consensus 135 ~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~ 196 (345)
++.+|..|+||||+|+..|+.+++++|+++ |++++.+|..|+||||+|+.
T Consensus 276 -----------~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~-Gad~~~~d~~G~TpL~~A~~ 325 (327)
T 1sw6_A 276 -----------LNAQDSNGDTCLNIAARLGNISIVDALLDY-GADPFIANKSGLRPVDFGAG 325 (327)
T ss_dssp -----------TTCCCTTSCCHHHHHHHHCCHHHHHHHHHT-TCCTTCCCTTSCCGGGGTCC
T ss_pred -----------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHh
Confidence 788999999999999999999999999999 99999999999999999987
No 80
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=1.8e-28 Score=211.82 Aligned_cols=164 Identities=21% Similarity=0.134 Sum_probs=131.3
Q ss_pred CCCHHHHHHHHhcCCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHH
Q 043760 2 AGSVNTLLELRQQDPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKAL 81 (345)
Q Consensus 2 ~g~~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~L 81 (345)
.|+.+.++.|++++.++.. +..|.||||+|+..|+.+++++|++.++++ +.+|..|.||||+|+..|+.+++++|
T Consensus 15 ~~~~~~~~~ll~~g~~~~~----~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~g~~~~v~~L 89 (239)
T 1ycs_B 15 TNLRKTGSERIAHGMRVKF----NPLPLALLLDSSLEGEFDLVQRIIYEVDDP-SLPNDEGITALHNAVCAGHTEIVKFL 89 (239)
T ss_dssp --------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSC-CCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred hhhHHHHHHHhccCCCccc----CchhhHHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 4778899999999987642 678999999999999999999999999987 89999999999999999999999999
Q ss_pred HhhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCC-CHHHHH
Q 043760 82 LQVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGM-TILLLA 160 (345)
Q Consensus 82 l~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~-t~Lh~A 160 (345)
+++|+++ +..|..|+||||+|+..|+.+++++|+++|++ ++.++..|. ||||+|
T Consensus 90 l~~ga~~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~------------------------~~~~~~~~~~t~l~~a 144 (239)
T 1ycs_B 90 VQFGVNV-NAADSDGWTPLHCAASCNNVQVCKFLVESGAA------------------------VFAMTYSDMQTAADKC 144 (239)
T ss_dssp HHHTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC------------------------TTCCCSSSCCCHHHHC
T ss_pred HHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------------------cceecCCCCcchHHHH
Confidence 9999999 89999999999999999999999999999998 888887777 999999
Q ss_pred --HHcCCHHHHHHhhhcCCcccccc---------CCCCCcHHHHHHh
Q 043760 161 --VADKQIEAIKFLTTSTAIEVNAV---------TANGFTAWDILAQ 196 (345)
Q Consensus 161 --~~~g~~~~v~~Ll~~~~~~~~~~---------n~~g~T~L~~a~~ 196 (345)
+..|+.+++++|++. +++++.. +..+.++++++..
T Consensus 145 ~~~~~g~~~~~~~Ll~~-~a~~~~~~~~~~~al~d~~~~~~~eLa~~ 190 (239)
T 1ycs_B 145 EEMEEGYTQCSQFLYGV-QEKMGIMNKGVIYALWDYEPQNDDELPMK 190 (239)
T ss_dssp CSSSTTCCCHHHHHHHH-HHHTTTTGGGEEEESSCBCCSSTTBCCBC
T ss_pred HHhhhccHHHHHHHHHh-hhcccccccceEEEEeccCCCCCCccccc
Confidence 788999999999999 8888776 5556777766655
No 81
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.95 E-value=5.3e-28 Score=213.37 Aligned_cols=163 Identities=20% Similarity=0.210 Sum_probs=150.1
Q ss_pred CCcHHHHHHHcCCHHHHHHHhcCCCC-cccccCCCCchHHHHHHHcCCHHHHHHHHhhCC-CCCcCCCCCCCcHHHHHH-
Q 043760 28 SETPLHVAALLGHEDFAKEILPQKPR-IAEELDSRKSSALHIASQKGYVGIVKALLQVIP-DKCSDTDVDGRNPLHLAA- 104 (345)
Q Consensus 28 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~-~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~-~~~~~~d~~g~tpLh~A~- 104 (345)
+++++|.|+..|+.+.++.|++.+.+ .++.+|..|+||||+|+..|+.+++++|++.|+ ++ +..+..|.||||+|+
T Consensus 76 ~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~-~~~~~~g~tpL~~a~~ 154 (276)
T 4hbd_A 76 CRSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKV-DKQNRAGYSPIMLTAL 154 (276)
T ss_dssp HSTTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCT-TCCCTTSCCHHHHGGG
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcC-CCCCCCCCCHHHHHHH
Confidence 56788999999999999999987655 238889999999999999999999999999998 55 899999999999999
Q ss_pred ----HcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhcCCccc
Q 043760 105 ----MRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTSTAIEV 180 (345)
Q Consensus 105 ----~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~ 180 (345)
..++.+++++|++.+.. .+..|..|+||||+|+..|+.+++++|++. |+++
T Consensus 155 ~~~~~~~~~~~v~~Ll~~g~~------------------------~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~-gad~ 209 (276)
T 4hbd_A 155 ATLKTQDDIETVLQLFRLGNI------------------------NAKASQAGQTALMLAVSHGRVDVVKALLAC-EADV 209 (276)
T ss_dssp CCCCSHHHHHHHHHHHHHSCT------------------------TCCCTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCT
T ss_pred HHhhhhhhHHHHHHHHHcCCC------------------------ccccCCCCCCHHHHHHHcCCHHHHHHHHhC-CCCC
Confidence 67899999999999977 778889999999999999999999999999 9999
Q ss_pred cccCCCCCcHHHHHHhcCCCCchhhHHHHHHH-cccccccc
Q 043760 181 NAVTANGFTAWDILAQSKRDIKDWDTGELLRR-AGAISAKD 220 (345)
Q Consensus 181 ~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~-~ga~~~~~ 220 (345)
|.+|..|+||||+|+. .++.+++++|++ .|++.+..
T Consensus 210 n~~d~~G~TpLh~A~~----~g~~~iv~~Ll~~~gad~~~~ 246 (276)
T 4hbd_A 210 NVQDDDGSTALMCACE----HGHKEIAGLLLAVPSCDISLT 246 (276)
T ss_dssp TCCCTTSCCHHHHHHH----HTCHHHHHHHHTSTTCCTTCC
T ss_pred CCCCCCCCCHHHHHHH----CCCHHHHHHHHhcCCCCCcCc
Confidence 9999999999999999 888999999999 89988653
No 82
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.95 E-value=2.8e-30 Score=221.70 Aligned_cols=173 Identities=16% Similarity=0.021 Sum_probs=152.6
Q ss_pred CCCHHHHHHHHhcCCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHH
Q 043760 2 AGSVNTLLELRQQDPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKAL 81 (345)
Q Consensus 2 ~g~~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~L 81 (345)
.|+.++|+.|++.++++... |..|+||||+||..|+.+++++|++.++++ +.+|..|+||||+|+..|+.+++++|
T Consensus 31 ~g~~~~v~~Ll~~g~~~~~~---d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~-n~~d~~g~tpLh~A~~~g~~~~v~~L 106 (229)
T 2vge_A 31 TGELEVVQQAVKEMNDPSQP---NEEGITALHNAICGANYSIVDFLITAGANV-NSPDSHGWTPLHCAASCNDTVICMAL 106 (229)
T ss_dssp HTCHHHHHHHHHHSSCTTCC---CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred cCCHHHHHHHHhcCCCCCCC---CCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 48999999999999886543 889999999999999999999999999998 89999999999999999999999999
Q ss_pred HhhCCCCCcCCC-CCCCcHHHHH--HHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHH
Q 043760 82 LQVIPDKCSDTD-VDGRNPLHLA--AMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILL 158 (345)
Q Consensus 82 l~~~~~~~~~~d-~~g~tpLh~A--~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh 158 (345)
+++|+++ +..+ ..|+||||+| +..|+.+++++|++.|++ ++.+|..|.||+|
T Consensus 107 l~~ga~~-~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~------------------------~~~~~~~~~~~l~ 161 (229)
T 2vge_A 107 VQHGAAI-FATTLSDGATAFEKCDPYREGYADCATYLADVEQS------------------------MGLMNSGAVYALW 161 (229)
T ss_dssp HTTTCCT-TCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHH------------------------TTTSGGGEEEESS
T ss_pred HHcCCCc-ccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCC------------------------cccccCCchHHHH
Confidence 9999999 5554 6999999999 999999999999999988 7888888999999
Q ss_pred HHHHcCCHHHHHHhhhcCCcc--ccccCCCCCcHHHHHHhcCCCCchhhHHHHHH
Q 043760 159 LAVADKQIEAIKFLTTSTAIE--VNAVTANGFTAWDILAQSKRDIKDWDTGELLR 211 (345)
Q Consensus 159 ~A~~~g~~~~v~~Ll~~~~~~--~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~ 211 (345)
.++... ..++|++. |++ ++.+|..|+||||+|+. .++.++++.++
T Consensus 162 ~~~~~~---~~~~ll~~-ga~~~~~~~d~~G~TpL~~A~~----~g~~~~v~~~~ 208 (229)
T 2vge_A 162 DYSAEF---GDELSFRE-GESVTVLRRDGPEETDWWWAAL----HGQEGYVPRNY 208 (229)
T ss_dssp CBCCSS---TTBCCBCT-TCEEEEEESSCTTCSSEEEEEE----TTEEEEEEGGG
T ss_pred HHhhcc---ccccCccc-cccccccccCCCcccHHHHHHH----cCCcceeehhh
Confidence 655544 33677777 777 78899999999999999 77777665433
No 83
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.95 E-value=1.2e-26 Score=179.25 Aligned_cols=122 Identities=39% Similarity=0.587 Sum_probs=69.8
Q ss_pred CCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHHcC
Q 043760 28 SETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLHLAAMRG 107 (345)
Q Consensus 28 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g 107 (345)
|+||||+|+..|+.+++++|++.+.++ +..|..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNG 79 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTT
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCcHHHHHHHcC
Confidence 555555555555555555555555554 555555555555555555555555555555555 455555555555555555
Q ss_pred cHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhc
Q 043760 108 HIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTS 175 (345)
Q Consensus 108 ~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ 175 (345)
+.+++++|++++++ ++.+|..|.||||+|+..|+.+++++|+++
T Consensus 80 ~~~~~~~Ll~~g~~------------------------~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 123 (126)
T 1n0r_A 80 HLEVVKLLLEAGAD------------------------VNAKDKNGRTPLHLAARNGHLEVVKLLLEA 123 (126)
T ss_dssp CHHHHHHHHHTTCC------------------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHcCCC------------------------CcccCCCCCCHHHHHHHcCcHHHHHHHHHc
Confidence 55555555555554 455555555555555555555555555555
No 84
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.94 E-value=2e-26 Score=178.01 Aligned_cols=126 Identities=38% Similarity=0.545 Sum_probs=121.3
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhc
Q 043760 61 RKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENM 140 (345)
Q Consensus 61 ~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~ 140 (345)
+|+||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|++.+++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------------------- 60 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD------------------- 60 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-------------------
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCC-------------------
Confidence 5899999999999999999999999998 78899999999999999999999999999988
Q ss_pred CCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhcCCccccccCCCCCcHHHHHHhcCCCCchhhHHHHHHHcccc
Q 043760 141 GDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTSTAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELLRRAGAI 216 (345)
Q Consensus 141 ~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga~ 216 (345)
++.+|..|.||||+|+..|+.+++++|++. |++++.+|..|.||||+|+. .++.+++++|++.||+
T Consensus 61 -----~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~l~~A~~----~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 61 -----VNAKDKNGRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAAR----NGHLEVVKLLLEAGAY 126 (126)
T ss_dssp -----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHH----TTCHHHHHHHHHHTCC
T ss_pred -----CcccCCCCCcHHHHHHHcChHHHHHHHHHc-CCCCcccCCCCCCHHHHHHH----cCcHHHHHHHHHcCCC
Confidence 888999999999999999999999999999 99999999999999999999 8899999999999985
No 85
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.94 E-value=1e-26 Score=182.91 Aligned_cols=125 Identities=26% Similarity=0.388 Sum_probs=119.2
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHHHHH
Q 043760 25 NCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLHLAA 104 (345)
Q Consensus 25 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~ 104 (345)
...+.||||+|+..|+.+++++|++.+.++ +.+|..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~ 88 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADV-NAKDEYGLTPLYLATAHGHLEIVEVLLKNGADV-NAVDAIGFTPLHLAA 88 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHH
Confidence 566899999999999999999999999998 889999999999999999999999999999998 789999999999999
Q ss_pred HcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhc
Q 043760 105 MRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTS 175 (345)
Q Consensus 105 ~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ 175 (345)
..|+.+++++|++++++ ++.+|..|+||||+|+..|+.+++++|++.
T Consensus 89 ~~~~~~~v~~Ll~~g~~------------------------~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ 135 (136)
T 2jab_A 89 FIGHLEIAEVLLKHGAD------------------------VNAQDKFGKTAFDISIGNGNEDLAEILQKL 135 (136)
T ss_dssp HHTCHHHHHHHHHTTCC------------------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHC
T ss_pred HcCCHHHHHHHHHcCCC------------------------CcCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 99999999999999988 889999999999999999999999999986
No 86
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.94 E-value=1.2e-26 Score=182.43 Aligned_cols=127 Identities=31% Similarity=0.352 Sum_probs=119.7
Q ss_pred cCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHH
Q 043760 58 LDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLL 137 (345)
Q Consensus 58 ~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~ 137 (345)
....+.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|+.+++++|++.+++
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---------------- 72 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADV-NAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD---------------- 72 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC----------------
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----------------
Confidence 4567889999999999999999999999998 78999999999999999999999999999988
Q ss_pred HhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhcCCccccccCCCCCcHHHHHHhcCCCCchhhHHHHHHHcc
Q 043760 138 ENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTSTAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELLRRAG 214 (345)
Q Consensus 138 ~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~g 214 (345)
++.+|..|+||||+|+..|+.+++++|++. |++++.+|..|+||||+|+. .++.+++++|++.|
T Consensus 73 --------~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~tpl~~A~~----~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 73 --------VNAVDAIGFTPLHLAAFIGHLEIAEVLLKH-GADVNAQDKFGKTAFDISIG----NGNEDLAEILQKLN 136 (136)
T ss_dssp --------TTCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHH----TTCHHHHHHHHHC-
T ss_pred --------CCcCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCcCcCCCCCCHHHHHHH----CCCHHHHHHHHHcC
Confidence 889999999999999999999999999999 99999999999999999999 88999999999876
No 87
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.94 E-value=1.9e-27 Score=197.25 Aligned_cols=152 Identities=15% Similarity=0.080 Sum_probs=134.3
Q ss_pred CCCHHHHHHHHhcCCccccCCCCCCCCCcHHHHHHHcCCH----HHHHHHhcCCCCcccccCCCCchHHHHHHHcCC---
Q 043760 2 AGSVNTLLELRQQDPLILERPTVNCLSETPLHVAALLGHE----DFAKEILPQKPRIAEELDSRKSSALHIASQKGY--- 74 (345)
Q Consensus 2 ~g~~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~----~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~--- 74 (345)
.|+++.++.++..+..... +..|+||||+|+.+|+. +++++|+++|+++ +.+|..|+||||+|+..|+
T Consensus 16 ~g~~~~~~~l~~~~~~~~~----~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~TpLh~a~~~~~~~~ 90 (186)
T 3t8k_A 16 LGTYEDFLELFEKGYEDKE----SVLKSNILYDVLRNNNDEARYKISMFLINKGADI-KSRTKEGTTLFFPLFQGGGNDI 90 (186)
T ss_dssp HSCHHHHHHHHHHSSSCHH----HHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS-SCCCTTCCCTHHHHHHHCTTCH
T ss_pred cCCHHHHHHHHhcCccccc----ccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcCCcch
Confidence 5899999999998854221 36799999999999985 5999999999998 9999999999999999987
Q ss_pred ---HHHHHHHHhhCCCCCcCCCCCCC-cHHHHHHHcC-----cHHHHHHHHh-cCCCcccccccCCccHHHHHHhcCCcc
Q 043760 75 ---VGIVKALLQVIPDKCSDTDVDGR-NPLHLAAMRG-----HIDVLEELVR-AKPDAASTRLIWVGSTEVLLENMGDFE 144 (345)
Q Consensus 75 ---~~iv~~Ll~~~~~~~~~~d~~g~-tpLh~A~~~g-----~~~iv~~Ll~-~~~~~~~~~~~~~~~~~~l~~~~~~~~ 144 (345)
.+++++|+++|+++ +.+|..|. ||||+|+..+ +.+++++|++ .|++
T Consensus 91 ~~~~~iv~~Ll~~Gadi-n~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad----------------------- 146 (186)
T 3t8k_A 91 TGTTELCKIFLEKGADI-TALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQ----------------------- 146 (186)
T ss_dssp HHHHHHHHHHHHTTCCS-SSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCC-----------------------
T ss_pred hhHHHHHHHHHHCCCCC-CccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCC-----------------------
Confidence 68899999999999 89999999 9999999944 4679999999 8998
Q ss_pred cccccCCCCCCHHHHHHHcCCHHHHHHhhhcCCccccccC
Q 043760 145 LLNAKDDYGMTILLLAVADKQIEAIKFLTTSTAIEVNAVT 184 (345)
Q Consensus 145 ~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n 184 (345)
++.+|..|+||||+|++.|+.+++++|++. ..+.+.++
T Consensus 147 -~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~-~~~~~~~~ 184 (186)
T 3t8k_A 147 -LLIKDKWGLTALEFVKRCQKPIALKMMEDY-IKKYNLKE 184 (186)
T ss_dssp -TTCCCTTSCCHHHHHHTTTCHHHHHHHHHH-HHHHTCCC
T ss_pred -CcccCCCCCCHHHHHHHcCCHHHHHHHHHH-HHHHhccc
Confidence 899999999999999999999999999987 44555554
No 88
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.94 E-value=7.7e-27 Score=188.00 Aligned_cols=133 Identities=20% Similarity=0.228 Sum_probs=119.9
Q ss_pred cccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHH
Q 043760 56 EELDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEV 135 (345)
Q Consensus 56 ~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~ 135 (345)
...+..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+ .|+.+++++|++.+++
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~-------------- 69 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANP-NAPNSYGRRPIQVMM-MGSARVAELLLLHGAE-------------- 69 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCT-TCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC--------------
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCC--------------
Confidence 456788999999999999999999999999998 789999999999985 9999999999999988
Q ss_pred HHHhcCCcccccccCCCCCC-HHHHHHHcCCHHHHHHhhhcCCccccccCCCCCcHHHHHHhcCCCCchhhHHHHHHHcc
Q 043760 136 LLENMGDFELLNAKDDYGMT-ILLLAVADKQIEAIKFLTTSTAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELLRRAG 214 (345)
Q Consensus 136 l~~~~~~~~~~~~~d~~g~t-~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~g 214 (345)
++.+|..|+| |||+|+..|+.+++++|+++ |++++.+|..|+||||+|+. .++.+++++|++.|
T Consensus 70 ----------~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~----~~~~~~v~~Ll~~g 134 (156)
T 1bi7_B 70 ----------PNCADPATLTRPVHDAAREGFLDTLVVLHRA-GARLDVRDAWGRLPVDLAEE----LGHRDVARYLRAAA 134 (156)
T ss_dssp ----------CCCCCTTTCCCHHHHHHHHTCHHHHHHHHHH-TCCSSCCCTTCCCHHHHHHH----HTCHHHHHHHSSCC
T ss_pred ----------CCCcCCCCCcHHHHHHHHCCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHH----hCHHHHHHHHHHcC
Confidence 8999999999 99999999999999999999 99999999999999999999 78899999999999
Q ss_pred ccccc
Q 043760 215 AISAK 219 (345)
Q Consensus 215 a~~~~ 219 (345)
++...
T Consensus 135 a~~~~ 139 (156)
T 1bi7_B 135 GGTRG 139 (156)
T ss_dssp -----
T ss_pred CCCCc
Confidence 98865
No 89
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.93 E-value=1.4e-26 Score=182.20 Aligned_cols=95 Identities=28% Similarity=0.336 Sum_probs=45.6
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHHHHH
Q 043760 25 NCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLHLAA 104 (345)
Q Consensus 25 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~ 104 (345)
|..|+||||+|+..|+.+++++|++.+.++ +.+|..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+
T Consensus 7 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~ 84 (137)
T 3c5r_A 7 NHRGETLLHIASIKGDIPSVEYLLQNGSDP-NVKDHAGWTPLHEACNHGHLKVVELLLQHKALV-NTTGYQNDSPLHDAA 84 (137)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCGGGCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcc-cCcCCCCCCHHHHHH
Confidence 444445555555545555555444444444 444444444444444444444444444444444 344444444444444
Q ss_pred HcCcHHHHHHHHhcCCC
Q 043760 105 MRGHIDVLEELVRAKPD 121 (345)
Q Consensus 105 ~~g~~~iv~~Ll~~~~~ 121 (345)
..|+.+++++|+++|++
T Consensus 85 ~~~~~~~v~~Ll~~ga~ 101 (137)
T 3c5r_A 85 KNGHVDIVKLLLSYGAS 101 (137)
T ss_dssp HTTCHHHHHHHHHTTCC
T ss_pred HcCCHHHHHHHHHcCCC
Confidence 44444444444444444
No 90
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.93 E-value=8.4e-26 Score=195.63 Aligned_cols=145 Identities=24% Similarity=0.192 Sum_probs=131.5
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCC-CCCCcHHHHH
Q 043760 25 NCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTD-VDGRNPLHLA 103 (345)
Q Consensus 25 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d-~~g~tpLh~A 103 (345)
+..|.||||+|+..|+.+++++|++ +.++ +.+|..|+||||+|+..|+.+++++|+++|+++ +..+ ..|.||||+|
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~g~t~L~~A 118 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALHMA 118 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCT-TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSCCCHHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCC-CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CcCCCCCCCCHHHHH
Confidence 4578999999999999999999999 8887 889999999999999999999999999999999 5666 8899999999
Q ss_pred HHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhcCCcccccc
Q 043760 104 AMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTSTAIEVNAV 183 (345)
Q Consensus 104 ~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~ 183 (345)
+..|+.+++++|+++|++ ++.+|..|+||||+|+..++
T Consensus 119 ~~~g~~~~v~~Ll~~ga~------------------------~~~~d~~g~t~l~~A~~~~~------------------ 156 (244)
T 3ui2_A 119 AGYVRPEVVEALVELGAD------------------------IEVEDERGLTALELAREILK------------------ 156 (244)
T ss_dssp HHTTCHHHHHHHHHTTCC------------------------TTCCCTTCCCHHHHHHHHHT------------------
T ss_pred HHcCCHHHHHHHHHCCCC------------------------CCCCCCCCCcHHHHHHHHHh------------------
Confidence 999999999999999998 89999999999999986321
Q ss_pred CCCCCcHHHHHHhcCCCCchhhHHHHHHHcccccc
Q 043760 184 TANGFTAWDILAQSKRDIKDWDTGELLRRAGAISA 218 (345)
Q Consensus 184 n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga~~~ 218 (345)
+..+.||||+|+. .++.+++++|.+.+.+..
T Consensus 157 ~~~~~~~l~~a~~----~g~~~iv~~L~~~~~~~~ 187 (244)
T 3ui2_A 157 TTPKGNPMQFGRR----IGLEKVINVLEGQVFEYA 187 (244)
T ss_dssp TCCCSSHHHHHHH----HHHHHHHHHHHHHHEEEE
T ss_pred ccCCCCHHHHHHH----cChHHHHHHHHHhccccc
Confidence 2568999999999 889999999999877543
No 91
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.93 E-value=1.1e-25 Score=186.10 Aligned_cols=140 Identities=24% Similarity=0.210 Sum_probs=127.2
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCC-CCCCcHHHHH
Q 043760 25 NCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTD-VDGRNPLHLA 103 (345)
Q Consensus 25 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d-~~g~tpLh~A 103 (345)
+..|+||||+|+..|+.+++++|++ +.++ +.+|..|+||||+|+..|+.+++++|+++|+++ +..+ ..|+||||+|
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~~g~tpL~~A 117 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALHMA 117 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSSCCHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCCHHHHH
Confidence 4578999999999999999999999 8777 889999999999999999999999999999999 5666 8999999999
Q ss_pred HHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhcCCcccccc
Q 043760 104 AMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTSTAIEVNAV 183 (345)
Q Consensus 104 ~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~ 183 (345)
+..|+.+++++|+++|++ ++.+|..|+||||+|++.++.
T Consensus 118 ~~~~~~~~v~~Ll~~ga~------------------------~~~~d~~g~tpl~~A~~~~~~----------------- 156 (183)
T 3deo_A 118 AGYVRPEVVEALVELGAD------------------------IEVEDERGLTALELAREILKT----------------- 156 (183)
T ss_dssp HHTTCHHHHHHHHHHTCC------------------------TTCCCTTSCCHHHHHHHHHHT-----------------
T ss_pred HhcCcHHHHHHHHHcCCC------------------------CcCCCCCCCCHHHHHHHhccC-----------------
Confidence 999999999999999998 899999999999999875321
Q ss_pred CCCCCcHHHHHHhcCCCCchhhHHHHHHHc
Q 043760 184 TANGFTAWDILAQSKRDIKDWDTGELLRRA 213 (345)
Q Consensus 184 n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~ 213 (345)
..+.++|++|+. .+..+++++|.++
T Consensus 157 -~~~~~~l~~a~~----~~~~~i~~~L~~~ 181 (183)
T 3deo_A 157 -TPKGNPMQFGRR----IGLEKVINVLEGQ 181 (183)
T ss_dssp -CCCCSHHHHHHH----HHHHHHHHHHHTC
T ss_pred -cccccHHHHHHH----cCHHHHHHHHHHh
Confidence 456899999999 8899999999754
No 92
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.93 E-value=3.1e-26 Score=180.26 Aligned_cols=129 Identities=29% Similarity=0.272 Sum_probs=114.1
Q ss_pred ccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHH
Q 043760 57 ELDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVL 136 (345)
Q Consensus 57 ~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l 136 (345)
.+|..|+||||+|+..|+.+++++|++.|+++ +..|..|.||||+|+..|+.+++++|++.+++
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~--------------- 68 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDP-NVKDHAGWTPLHEACNHGHLKVVELLLQHKAL--------------- 68 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---------------
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc---------------
Confidence 46899999999999999999999999999999 78999999999999999999999999999988
Q ss_pred HHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhc--CCccccccCCCCCcHHHHHHhcCCCCchhhHHHHHHHcc
Q 043760 137 LENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTS--TAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELLRRAG 214 (345)
Q Consensus 137 ~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~--~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~g 214 (345)
++.+|..|+||||+|+..|+.+++++|++. . ++.+|..|+||||+|+. .+..+++++|.+.+
T Consensus 69 ---------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~tpl~~A~~----~~~~~~l~~l~~~~ 132 (137)
T 3c5r_A 69 ---------VNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGAS---RNAVNIFGLRPVDYTDD----ESMKSLLLLPEKNE 132 (137)
T ss_dssp ---------TTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCGGGGCCC----HHHHHHHSCC----
T ss_pred ---------ccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCCCCCCCCHHHHHhh----ccHHHHHhhccccc
Confidence 889999999999999999999999999974 3 36788999999999998 78889999888877
Q ss_pred ccc
Q 043760 215 AIS 217 (345)
Q Consensus 215 a~~ 217 (345)
...
T Consensus 133 ~s~ 135 (137)
T 3c5r_A 133 SSS 135 (137)
T ss_dssp ---
T ss_pred cCC
Confidence 643
No 93
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.92 E-value=5.8e-26 Score=193.60 Aligned_cols=132 Identities=19% Similarity=0.212 Sum_probs=82.7
Q ss_pred ccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhc-CCCcccccccCCccHHH
Q 043760 57 ELDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRA-KPDAASTRLIWVGSTEV 135 (345)
Q Consensus 57 ~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~-~~~~~~~~~~~~~~~~~ 135 (345)
..+..|.||||+|+..|+.+++++|++.|+++ +..|..|+||||+|+..|+.+++++|++. +++
T Consensus 68 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~-------------- 132 (222)
T 3ehr_A 68 EQAESIDNPLHEAAKRGNLSWLRECLDNRVGV-NGLDKAGSTALYWACHGGHKDIVEMLFTQPNIE-------------- 132 (222)
T ss_dssp HHEEEESCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCC--------------
T ss_pred ccccccccccccccccCcHHHHHHHHhCCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCC--------------
Confidence 34556666777777767777777776666666 56666667777777777777777777666 555
Q ss_pred HHHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhcCCccccccCCCCCcHHHHHHhcCCCCchhhHHHHHHHccc
Q 043760 136 LLENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTSTAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELLRRAGA 215 (345)
Q Consensus 136 l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga 215 (345)
++.+|..|+||||+|+..|+.+++++|++. |++++.+|..|+||||+|+. .+..++++.|++.|+
T Consensus 133 ----------~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~----~~~~~~l~~l~~~~~ 197 (222)
T 3ehr_A 133 ----------LNQQNKLGDTALHAAAWKGYADIVQLLLAK-GARTDLRNIEKKLAFDMATN----AACASLLKKKQGTDA 197 (222)
T ss_dssp ----------CCCCCTTSCCHHHHHHHHTCHHHHHHHHHH-TCCSCCCCTTSCCHHHHCCS----HHHHHHHC-------
T ss_pred ----------ccccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCccccCCCCCHHHHhcc----hhHHHHHHHHhccch
Confidence 666666677777777777777777777766 66677777777777777666 566666666666666
Q ss_pred ccc
Q 043760 216 ISA 218 (345)
Q Consensus 216 ~~~ 218 (345)
...
T Consensus 198 ~~~ 200 (222)
T 3ehr_A 198 VRT 200 (222)
T ss_dssp ---
T ss_pred hhh
Confidence 553
No 94
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.92 E-value=3.4e-27 Score=216.25 Aligned_cols=158 Identities=16% Similarity=0.139 Sum_probs=132.7
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHhcCCCCc--ccccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCC--cCCCCCCCcHH
Q 043760 25 NCLSETPLHVAALLGHEDFAKEILPQKPRI--AEELDSRKSSALHIASQKGYVGIVKALLQVIPDKC--SDTDVDGRNPL 100 (345)
Q Consensus 25 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~--~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~--~~~d~~g~tpL 100 (345)
+.+++||||+||..|+.+++++|++.+... ....+..|.||||+||..|+.++|++|+++|+++. +..+.+ .|||
T Consensus 89 g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpL 167 (376)
T 2aja_A 89 GIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAF 167 (376)
T ss_dssp TCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHH
T ss_pred CCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHH
Confidence 344679999999999999999999998722 12345678899999999999999999999997621 223333 9999
Q ss_pred HHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccc--cCCCCCCHHHHHH-HcCCHHHHHHhhhcCC
Q 043760 101 HLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNA--KDDYGMTILLLAV-ADKQIEAIKFLTTSTA 177 (345)
Q Consensus 101 h~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~d~~g~t~Lh~A~-~~g~~~~v~~Ll~~~~ 177 (345)
|+|+..|+.+++++|+++|++ ++. .|..|.||||+|+ ..|+.+++++|++. |
T Consensus 168 h~Aa~~G~~eiv~~Ll~~ga~------------------------~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~-g 222 (376)
T 2aja_A 168 RLAAENGHLHVLNRLCELAPT------------------------EATAMIQAENYYAFRWAAVGRGHHNVINFLLDC-P 222 (376)
T ss_dssp HHHHHTTCHHHHHHHHHSCGG------------------------GHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTS-H
T ss_pred HHHHHCCCHHHHHHHHHcCCc------------------------cchhccCCCCCCHHHHHHHHCCCHHHHHHHHhC-C
Confidence 999999999999999999988 555 7788999999999 99999999999997 5
Q ss_pred ccccccCCCCCcHHHHHHhcCCCCchhhHHHHHHHccccccc
Q 043760 178 IEVNAVTANGFTAWDILAQSKRDIKDWDTGELLRRAGAISAK 219 (345)
Q Consensus 178 ~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga~~~~ 219 (345)
+ .|.||||+|+. .++.+++++|++.|++...
T Consensus 223 a-------~~~taL~~Aa~----~g~~evv~lL~~~ga~~~~ 253 (376)
T 2aja_A 223 V-------MLAYAEIHEFE----YGEKYVNPFIARHVNRLKE 253 (376)
T ss_dssp H-------HHHHHHHCTTT----TTTTTHHHHHHHHHHHHHH
T ss_pred C-------ccchHHHHHHH----CCCHHHHHHHHhcCccccc
Confidence 3 28899999999 8899999999999997743
No 95
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.92 E-value=4e-25 Score=197.14 Aligned_cols=136 Identities=17% Similarity=0.147 Sum_probs=94.4
Q ss_pred CCcHHHHHHHcCCHHHHHHHhcCCCCcccc------cCCCCchHHHHHHHc---CCHHHHHHHHhhCCCCCcCCCCCCCc
Q 043760 28 SETPLHVAALLGHEDFAKEILPQKPRIAEE------LDSRKSSALHIASQK---GYVGIVKALLQVIPDKCSDTDVDGRN 98 (345)
Q Consensus 28 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~------~d~~g~tpLh~A~~~---g~~~iv~~Ll~~~~~~~~~~d~~g~t 98 (345)
+.++||.|+..|+.+.++.|++.++++ +. .+..|.||||+|+.. |+.+++++|+++|+++ +..|..|+|
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~-~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv-n~~d~~G~T 228 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDF-GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGNT 228 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCT-TCCCTTCCC
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcc-cccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCC-CCCCCCCCC
Confidence 345677777777777777777777766 43 466777777777775 6777777777777776 666777777
Q ss_pred HHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhcCCc
Q 043760 99 PLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTSTAI 178 (345)
Q Consensus 99 pLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~ 178 (345)
|||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|++. |+
T Consensus 229 pLh~A~~~g~~~~v~~Ll~~gad------------------------~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~-ga 283 (301)
T 2b0o_E 229 ALHYAALYNQPDCLKLLLKGRAL------------------------VGTVNEAGETALDIARKKHHKECEELLEQA-QA 283 (301)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCC------------------------CSCCCTTSCCHHHHHHHHTCHHHHHHHHHH-HH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCC------------------------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHh-cC
Confidence 77777777777777777777776 667777777777777777777777777776 44
Q ss_pred cccccCCCCCcHHHHHHh
Q 043760 179 EVNAVTANGFTAWDILAQ 196 (345)
Q Consensus 179 ~~~~~n~~g~T~L~~a~~ 196 (345)
+ .|.||||+|+.
T Consensus 284 ~------~g~tpLh~A~~ 295 (301)
T 2b0o_E 284 G------TFAFPLHVDYS 295 (301)
T ss_dssp H------TTSSCCC----
T ss_pred C------CCCChhHHHHh
Confidence 3 46677777766
No 96
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.92 E-value=5.5e-25 Score=169.77 Aligned_cols=112 Identities=29% Similarity=0.362 Sum_probs=76.4
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHHH
Q 043760 59 DSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLE 138 (345)
Q Consensus 59 d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~ 138 (345)
+..|.||||+|+..|+.+++++|++.++++ +..|..|+||||+|+..|+.+++++|++.+++
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----------------- 65 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDV-NRTLEGGRKPLHYAADCGQLEILEFLLLKGAD----------------- 65 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC-----------------
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCc-CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-----------------
Confidence 345666777777777777777777776666 56666677777777777777777777776666
Q ss_pred hcCCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhcCCccccccCCCCCcHHHHHHh
Q 043760 139 NMGDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTSTAIEVNAVTANGFTAWDILAQ 196 (345)
Q Consensus 139 ~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~ 196 (345)
++.+|..|+||||+|+..|+.+++++|++. |++++.+|..|+||||+|..
T Consensus 66 -------~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 66 -------INAPDKHHITPLLSAVYEGHVSCVKLLLSK-GADKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp -------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHCCC
T ss_pred -------CCcCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHhCC
Confidence 666667777777777777777777777776 66777777777777777644
No 97
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.92 E-value=3e-25 Score=171.28 Aligned_cols=114 Identities=20% Similarity=0.223 Sum_probs=105.8
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHHHHH
Q 043760 25 NCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLHLAA 104 (345)
Q Consensus 25 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~ 104 (345)
+..|.||||+|+..|+.+++++|++.+.++ +.+|..|+||||+|+..|+.+++++|+++|+++ +..|..|+||||+|+
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~tpL~~A~ 81 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDV-NRTLEGGRKPLHYAADCGQLEILEFLLLKGADI-NAPDKHHITPLLSAV 81 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCc-CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHH
Confidence 567899999999999999999999999988 889999999999999999999999999999998 889999999999999
Q ss_pred HcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHHHcC
Q 043760 105 MRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAVADK 164 (345)
Q Consensus 105 ~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g 164 (345)
..|+.+++++|++++++ ++.+|..|.||||+|+..+
T Consensus 82 ~~~~~~~v~~Ll~~ga~------------------------~~~~~~~g~t~l~~A~~~~ 117 (123)
T 3aaa_C 82 YEGHVSCVKLLLSKGAD------------------------KTVKGPDGLTAFEATDNQA 117 (123)
T ss_dssp HHTCHHHHHHHHHTTCC------------------------TTCCCTTSCCHHHHCCCHH
T ss_pred HcCCHHHHHHHHHcCCC------------------------CCCcCCCCCCHHHHhCCHH
Confidence 99999999999999998 8899999999999995443
No 98
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.92 E-value=3.8e-25 Score=188.52 Aligned_cols=137 Identities=21% Similarity=0.221 Sum_probs=115.3
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHHHhh-CCCCCcCCCCCCCcHHHHH
Q 043760 25 NCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKALLQV-IPDKCSDTDVDGRNPLHLA 103 (345)
Q Consensus 25 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~-~~~~~~~~d~~g~tpLh~A 103 (345)
+..|.||||+||..|+.+++++|++.+.++ +.+|..|+||||+||..|+.+++++|++. |+++ +..|..|.||||+|
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~-~~~d~~g~tpL~~A 147 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVGV-NGLDKAGSTALYWACHGGHKDIVEMLFTQPNIEL-NQQNKLGDTALHAA 147 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCC-CCCCTTSCCHHHHH
T ss_pred ccccccccccccccCcHHHHHHHHhCCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCc-cccCCCCCCHHHHH
Confidence 456799999999999999999999999998 88999999999999999999999999999 8888 89999999999999
Q ss_pred HHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhcCCcccccc
Q 043760 104 AMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTSTAIEVNAV 183 (345)
Q Consensus 104 ~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~ 183 (345)
+..|+.+++++|+++|++ ++.+|..|.||||+|+..++.++++.|++. +++.+..
T Consensus 148 ~~~~~~~~v~~Ll~~ga~------------------------~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~-~~~~~~~ 202 (222)
T 3ehr_A 148 AWKGYADIVQLLLAKGAR------------------------TDLRNIEKKLAFDMATNAACASLLKKKQGT-DAVRTLS 202 (222)
T ss_dssp HHHTCHHHHHHHHHHTCC------------------------SCCCCTTSCCHHHHCCSHHHHHHHC-------------
T ss_pred HHcCCHHHHHHHHHcCCC------------------------CccccCCCCCHHHHhcchhHHHHHHHHhcc-chhhhcc
Confidence 999999999999999998 899999999999999999999999999999 8788877
Q ss_pred CCCCC
Q 043760 184 TANGF 188 (345)
Q Consensus 184 n~~g~ 188 (345)
|.+|.
T Consensus 203 ~~~~~ 207 (222)
T 3ehr_A 203 NAEDY 207 (222)
T ss_dssp -----
T ss_pred chhhh
Confidence 76653
No 99
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.91 E-value=5.4e-27 Score=214.95 Aligned_cols=203 Identities=16% Similarity=0.169 Sum_probs=138.1
Q ss_pred CCCHHHHHHHHhcCCccccCCCCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCc--ccccCCCCchHHHHHHHcCCHHHHH
Q 043760 2 AGSVNTLLELRQQDPLILERPTVNCLSETPLHVAALLGHEDFAKEILPQKPRI--AEELDSRKSSALHIASQKGYVGIVK 79 (345)
Q Consensus 2 ~g~~~~v~~ll~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~--~~~~d~~g~tpLh~A~~~g~~~iv~ 79 (345)
.|+.++|+.|++.+.........+..|.||||+||..|+.++|++|++++++. .+..+.+ .||||+||..|+.++|+
T Consensus 102 ~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~ 180 (376)
T 2aja_A 102 TGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLN 180 (376)
T ss_dssp HCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHH
T ss_pred cCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHH
Confidence 58999999999998743223344677899999999999999999999999752 1222223 99999999999999999
Q ss_pred HHHhhCCCCCcC--CCCCCCcHHHHHH-HcCcHHHHHHHHhcCCCccccc-----ccCCccHHHHHHhcCCcccccccCC
Q 043760 80 ALLQVIPDKCSD--TDVDGRNPLHLAA-MRGHIDVLEELVRAKPDAASTR-----LIWVGSTEVLLENMGDFELLNAKDD 151 (345)
Q Consensus 80 ~Ll~~~~~~~~~--~d~~g~tpLh~A~-~~g~~~iv~~Ll~~~~~~~~~~-----~~~~~~~~~l~~~~~~~~~~~~~d~ 151 (345)
+|+++|+++ +. .|..|.||||+|+ ..|+.++|++|++.|+...... ......+++|++.+.. ++..|.
T Consensus 181 ~Ll~~ga~~-~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~~~taL~~Aa~~g~~evv~lL~~~ga~---~~~~~~ 256 (376)
T 2aja_A 181 RLCELAPTE-ATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNR---LKEMHD 256 (376)
T ss_dssp HHHHSCGGG-HHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHHHHHHHHCTTTTTTTTHHHHHHHHHHH---HHHHHT
T ss_pred HHHHcCCcc-chhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCccchHHHHHHHCCCHHHHHHHHhcCcc---cccccH
Confidence 999999997 44 7888999999999 9999999999998654311000 0011125666665433 222211
Q ss_pred CCCCHHHHHHHcC---------------------------CHHHHHHhhhcCCccc----cccCCCCCcHHHHHHhcCCC
Q 043760 152 YGMTILLLAVADK---------------------------QIEAIKFLTTSTAIEV----NAVTANGFTAWDILAQSKRD 200 (345)
Q Consensus 152 ~g~t~Lh~A~~~g---------------------------~~~~v~~Ll~~~~~~~----~~~n~~g~T~L~~a~~~~~~ 200 (345)
+++.|+.+| ..+.+++|++.++++. ....+.+.||||+|+.
T Consensus 257 ----~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~~A~~---- 328 (376)
T 2aja_A 257 ----AFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALR---- 328 (376)
T ss_dssp ----TTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHH----
T ss_pred ----HHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCCCCCccHHHHHHHH----
Confidence 222222222 2345555554422211 2233456789999999
Q ss_pred CchhhHHHHHHHccccc
Q 043760 201 IKDWDTGELLRRAGAIS 217 (345)
Q Consensus 201 ~~~~~i~~~L~~~ga~~ 217 (345)
.++.+++++|++.|...
T Consensus 329 ~g~~e~v~lLl~~~~v~ 345 (376)
T 2aja_A 329 LGNQGACALLLSIPSVL 345 (376)
T ss_dssp HTCTTHHHHHTTSHHHH
T ss_pred cCcHHHHHHHHcChHHH
Confidence 78889999999877543
No 100
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.91 E-value=2.9e-26 Score=189.64 Aligned_cols=150 Identities=21% Similarity=0.204 Sum_probs=124.1
Q ss_pred HHcCCHHHHHHHhcCCCCc----------ccccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHH
Q 043760 36 ALLGHEDFAKEILPQKPRI----------AEELDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLHLAAM 105 (345)
Q Consensus 36 a~~g~~~~v~~Ll~~~~~~----------~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 105 (345)
++.|..+++++|++.+... ....+..|.||||+|+..|+.+++++|++ +.++ +..|..|+||||+|+.
T Consensus 8 a~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~ 85 (183)
T 3deo_A 8 SRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAG 85 (183)
T ss_dssp EEEETTTEEEEEEEETTCCCCEEEEGGGSCHHHHHHHHHHHHHHHHTTCHHHHHHHTT-TSCT-TCCCTTSCCHHHHHHH
T ss_pred HHhcCCchhHHHHHHhCCCCccccchhcccccCCCCCCCHHHHHHHcCCHHHHHHHHh-cCCC-CCcCCCCCCHHHHHHH
Confidence 3445555666666542211 01235689999999999999999999999 8888 7899999999999999
Q ss_pred cCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccC-CCCCCHHHHHHHcCCHHHHHHhhhcCCccccccC
Q 043760 106 RGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKD-DYGMTILLLAVADKQIEAIKFLTTSTAIEVNAVT 184 (345)
Q Consensus 106 ~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d-~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n 184 (345)
.|+.+++++|++++++ ++.+| ..|+||||+|+..|+.+++++|+++ |++++.+|
T Consensus 86 ~~~~~~v~~Ll~~ga~------------------------~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~d 140 (183)
T 3deo_A 86 LGSDKCVRLLAEAGAD------------------------LDHRDMRGGLTALHMAAGYVRPEVVEALVEL-GADIEVED 140 (183)
T ss_dssp HTCHHHHHHHHHTTCC------------------------TTCCCSSSSCCHHHHHHHTTCHHHHHHHHHH-TCCTTCCC
T ss_pred cCCHHHHHHHHHcCCC------------------------CCcCCCCCCCCHHHHHHhcCcHHHHHHHHHc-CCCCcCCC
Confidence 9999999999999998 88888 8899999999999999999999999 89999999
Q ss_pred CCCCcHHHHHHhcCCCCchhhHHHHHHHcccc
Q 043760 185 ANGFTAWDILAQSKRDIKDWDTGELLRRAGAI 216 (345)
Q Consensus 185 ~~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga~ 216 (345)
..|+||||+|+. .++.+..+.++..++.
T Consensus 141 ~~g~tpl~~A~~----~~~~~~~~~~l~~a~~ 168 (183)
T 3deo_A 141 ERGLTALELARE----ILKTTPKGNPMQFGRR 168 (183)
T ss_dssp TTSCCHHHHHHH----HHHTCCCCSHHHHHHH
T ss_pred CCCCCHHHHHHH----hccCcccccHHHHHHH
Confidence 999999999998 4444444445555543
No 101
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.90 E-value=1.2e-22 Score=178.99 Aligned_cols=165 Identities=19% Similarity=0.191 Sum_probs=140.1
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHhcCCCC-------cc-----------------------cccCCCCchHHHHHHHcC
Q 043760 24 VNCLSETPLHVAALLGHEDFAKEILPQKPR-------IA-----------------------EELDSRKSSALHIASQKG 73 (345)
Q Consensus 24 ~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~-------~~-----------------------~~~d~~g~tpLh~A~~~g 73 (345)
.|..+.+.|+.+...|+..+.+++...-+. .. ...+....++|+.|+..|
T Consensus 62 ~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a~~~~ 141 (278)
T 1dcq_A 62 LDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERRYARKKHADTAAKLHSLCEAVKTR 141 (278)
T ss_dssp TSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHHHHHHTT
T ss_pred cCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHHHHHHHHHHHHHHhhcccccccccchhhhhhhhHhhhc
Confidence 367788999999999987766655432111 10 000011246899999999
Q ss_pred CHHHHHHHHhhCCCCC-----cCCCCCCCcHHHHHHHc---CcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCccc
Q 043760 74 YVGIVKALLQVIPDKC-----SDTDVDGRNPLHLAAMR---GHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFEL 145 (345)
Q Consensus 74 ~~~iv~~Ll~~~~~~~-----~~~d~~g~tpLh~A~~~---g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 145 (345)
+.+.++.+++.|+++. +..+..|.||||+|+.. |+.+++++|+++|++
T Consensus 142 d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~------------------------ 197 (278)
T 1dcq_A 142 DIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN------------------------ 197 (278)
T ss_dssp CHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC------------------------
T ss_pred ccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCC------------------------
Confidence 9999999999999862 44588999999999999 899999999999998
Q ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHhhhcCCccccccCCCCCcHHHHHHhcCCCCchhhHHHHHHHccccc
Q 043760 146 LNAKDDYGMTILLLAVADKQIEAIKFLTTSTAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELLRRAGAIS 217 (345)
Q Consensus 146 ~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga~~ 217 (345)
+|.+|..|+||||+|+..|+.+++++|++. |++++.+|..|+||||+|+. .++.+++++|++.|+..
T Consensus 198 in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~-gad~~~~d~~g~tpL~~A~~----~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 198 LDKQTGKGSTALHYCCLTDNAECLKLLLRG-KASIEIANESGETPLDIAKR----LKHEHCEELLTQALSGR 264 (278)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHH----TTCHHHHHHHHHHHTTC
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCccCCCCCHHHHHHH----cCCHHHHHHHHHcCCCC
Confidence 899999999999999999999999999998 99999999999999999999 88899999999999965
No 102
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.90 E-value=3.7e-23 Score=197.13 Aligned_cols=129 Identities=19% Similarity=0.190 Sum_probs=111.3
Q ss_pred CCcHHHHHHHcCCHHHHHHHhcCCCCccccc------CCCCchHHHHHHH---cCCHHHHHHHHhhCCCCCcCCCCCCCc
Q 043760 28 SETPLHVAALLGHEDFAKEILPQKPRIAEEL------DSRKSSALHIASQ---KGYVGIVKALLQVIPDKCSDTDVDGRN 98 (345)
Q Consensus 28 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~------d~~g~tpLh~A~~---~g~~~iv~~Ll~~~~~~~~~~d~~g~t 98 (345)
..+.||.|+..|+.++++.|++.|+++ +.. |..|.||||+||. .|+.+++++|+++|+++ +..|..|+|
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~-n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v-n~~d~~g~T 209 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDF-GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGNT 209 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCS-SSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCT-TCCCSSSCC
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccc-cCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCC-CccCCCCCc
Confidence 446799999999999999999999887 655 7889999999966 88999999999999998 788999999
Q ss_pred HHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhcCCc
Q 043760 99 PLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTSTAI 178 (345)
Q Consensus 99 pLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~ 178 (345)
|||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|++. |+
T Consensus 210 pLh~A~~~g~~~~v~~Ll~~ga~------------------------~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~-ga 264 (497)
T 3lvq_E 210 ALHYAALYNQPDCLKLLLKGRAL------------------------VGTVNEAGETALDIARKKHHKECEELLEQA-QA 264 (497)
T ss_dssp HHHHHTTTTCHHHHHHHHHTCCC------------------------CSCCCTTCCCHHHHHHHTTCHHHHHHHHHT-CC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCC------------------------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHh-CC
Confidence 99999999999999999999988 888999999999999999999999999998 88
Q ss_pred ccccc
Q 043760 179 EVNAV 183 (345)
Q Consensus 179 ~~~~~ 183 (345)
+++..
T Consensus 265 ~~~~~ 269 (497)
T 3lvq_E 265 GTFAF 269 (497)
T ss_dssp -----
T ss_pred CCCCC
Confidence 88764
No 103
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.90 E-value=4.1e-25 Score=191.27 Aligned_cols=140 Identities=20% Similarity=0.185 Sum_probs=121.7
Q ss_pred CCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHHc
Q 043760 27 LSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLHLAAMR 106 (345)
Q Consensus 27 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~ 106 (345)
.+.+++.+++..|+.+.+..+...+.++ +..|.||||+|+..|+.+++++|++ +.++ +..|..|+||||+|+..
T Consensus 14 ~~~~~~l~~~~~g~~~~~~~~~~~~~~~----~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~ 87 (244)
T 3ui2_A 14 EGAMEYLIEWKDGHSPSWVPSSYIAADV----VSEYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGL 87 (244)
T ss_dssp TTEEEEEEEESSCCCCEEEEGGGSCHHH----HHHHHHHHHHHHTTTCHHHHHHTTT-TCCT-TCBCTTSCBHHHHHHHH
T ss_pred CCccHHHHHHHcCCCccccccccccccc----ccCCCCHHHHHHHcCCHHHHHHHHc-CCCC-CCcCCCCCCHHHHHHHC
Confidence 3555666666666666555544444332 5679999999999999999999999 8888 78999999999999999
Q ss_pred CcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccC-CCCCCHHHHHHHcCCHHHHHHhhhcCCccccccCC
Q 043760 107 GHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKD-DYGMTILLLAVADKQIEAIKFLTTSTAIEVNAVTA 185 (345)
Q Consensus 107 g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d-~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~ 185 (345)
|+.+++++|+++|++ ++.+| ..|+||||+|+..|+.+++++|+++ |++++.+|.
T Consensus 88 g~~~~v~~Ll~~ga~------------------------~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~d~ 142 (244)
T 3ui2_A 88 GSDKCVRLLAEAGAD------------------------LDHRDMRGGLTALHMAAGYVRPEVVEALVEL-GADIEVEDE 142 (244)
T ss_dssp TCHHHHHHHHHTTCC------------------------TTCCCSSSCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCT
T ss_pred CCHHHHHHHHHcCCC------------------------CCcCCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCC
Confidence 999999999999998 88888 7899999999999999999999999 999999999
Q ss_pred CCCcHHHHHHhc
Q 043760 186 NGFTAWDILAQS 197 (345)
Q Consensus 186 ~g~T~L~~a~~~ 197 (345)
.|+||||+|+..
T Consensus 143 ~g~t~l~~A~~~ 154 (244)
T 3ui2_A 143 RGLTALELAREI 154 (244)
T ss_dssp TCCCHHHHHHHH
T ss_pred CCCcHHHHHHHH
Confidence 999999999973
No 104
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.89 E-value=3.3e-23 Score=189.16 Aligned_cols=143 Identities=21% Similarity=0.235 Sum_probs=93.4
Q ss_pred CCcHHHHHHHc-CCHHHHHHHhcCCCCcccccC--CCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHHHHH
Q 043760 28 SETPLHVAALL-GHEDFAKEILPQKPRIAEELD--SRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLHLAA 104 (345)
Q Consensus 28 g~t~Lh~Aa~~-g~~~~v~~Ll~~~~~~~~~~d--~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~ 104 (345)
+.|+||.|+.. |+.+++++|++.++++ +..+ ..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+
T Consensus 199 ~~t~L~~Aa~~~g~~~~v~~LL~~Gadv-n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadv-n~~d~~G~TpLh~A~ 276 (368)
T 3jue_A 199 PGALLFRASGHPPSLPTMADALAHGADV-NWVNGGQDNATPLIQATAANSLLACEFLLQNGANV-NQADSAGRGPLHHAT 276 (368)
T ss_dssp HHHHHHHHTSSSCCHHHHHHHHHTTCCT-TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred CCcHHHHHHHccCCHHHHHHHHHcCCCC-CccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH
Confidence 45677777777 7777777777777776 6666 67777777777777777777777777777 677777777777777
Q ss_pred HcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhcC--Cccccc
Q 043760 105 MRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTST--AIEVNA 182 (345)
Q Consensus 105 ~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~--~~~~~~ 182 (345)
..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+..+ ..+...
T Consensus 277 ~~g~~~~v~~LL~~Gad------------------------~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~ 332 (368)
T 3jue_A 277 ILGHTGLACLFLKRGAD------------------------LGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQ 332 (368)
T ss_dssp HHTCHHHHHHHHHTTCC------------------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-------
T ss_pred HcCcHHHHHHHHHCcCC------------------------CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccc
Confidence 77777777777777777 6777777777777777777777777777652 123344
Q ss_pred cCCCCCcHHHHHHh
Q 043760 183 VTANGFTAWDILAQ 196 (345)
Q Consensus 183 ~n~~g~T~L~~a~~ 196 (345)
.+..+.|+++++..
T Consensus 333 ~~~~~~t~l~i~~~ 346 (368)
T 3jue_A 333 GQAGDETYLDIFRD 346 (368)
T ss_dssp --------------
T ss_pred cCCCCCCHHHHHHH
Confidence 55666677776655
No 105
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.88 E-value=1.6e-22 Score=147.87 Aligned_cols=93 Identities=37% Similarity=0.558 Sum_probs=88.2
Q ss_pred CCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHHc
Q 043760 27 LSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLHLAAMR 106 (345)
Q Consensus 27 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~ 106 (345)
+|+||||+|+..|+.+++++|++.+.++ +.+|..|+||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~t~l~~A~~~ 78 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARN 78 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHc
Confidence 4899999999999999999999999998 999999999999999999999999999999999 88999999999999999
Q ss_pred CcHHHHHHHHhcCCC
Q 043760 107 GHIDVLEELVRAKPD 121 (345)
Q Consensus 107 g~~~iv~~Ll~~~~~ 121 (345)
|+.+++++|++.|++
T Consensus 79 ~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 79 GHLEVVKLLLEAGAY 93 (93)
T ss_dssp TCHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHcCCC
Confidence 999999999998864
No 106
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.88 E-value=5.3e-22 Score=174.94 Aligned_cols=124 Identities=19% Similarity=0.164 Sum_probs=116.3
Q ss_pred CcHHHHHHHcCCHHHHHHHhcCCCCc-----ccccCCCCchHHHHHHHc---CCHHHHHHHHhhCCCCCcCCCCCCCcHH
Q 043760 29 ETPLHVAALLGHEDFAKEILPQKPRI-----AEELDSRKSSALHIASQK---GYVGIVKALLQVIPDKCSDTDVDGRNPL 100 (345)
Q Consensus 29 ~t~Lh~Aa~~g~~~~v~~Ll~~~~~~-----~~~~d~~g~tpLh~A~~~---g~~~iv~~Ll~~~~~~~~~~d~~g~tpL 100 (345)
.++|+.|+..|+.+.++.+++.+.++ ++..|..|.||||+|+.. |+.+++++|+++|+++ +..|..|.|||
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i-n~~d~~g~TpL 209 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL-DKQTGKGSTAL 209 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-TCCCTTCCCHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCc-cccCCCCCCHH
Confidence 46899999999999999999999885 244588999999999999 8999999999999999 88999999999
Q ss_pred HHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhcCCc
Q 043760 101 HLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTSTAI 178 (345)
Q Consensus 101 h~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~ 178 (345)
|+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|++. |+
T Consensus 210 h~A~~~g~~~~v~~Ll~~gad------------------------~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~-ga 262 (278)
T 1dcq_A 210 HYCCLTDNAECLKLLLRGKAS------------------------IEIANESGETPLDIAKRLKHEHCEELLTQA-LS 262 (278)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC------------------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-HT
T ss_pred HHHHHcCCHHHHHHHHHcCCC------------------------CCCccCCCCCHHHHHHHcCCHHHHHHHHHc-CC
Confidence 999999999999999999998 899999999999999999999999999999 54
No 107
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.88 E-value=5.1e-22 Score=145.21 Aligned_cols=89 Identities=40% Similarity=0.626 Sum_probs=56.7
Q ss_pred CchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcC
Q 043760 62 KSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMG 141 (345)
Q Consensus 62 g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~ 141 (345)
|+||||+|+..|+.+++++|++.|+++ +.+|..|.||||+|+..|+.+++++|++.|++
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~-n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-------------------- 60 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-------------------- 60 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC--------------------
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC--------------------
Confidence 566666666666666666666666665 55666666666666666666666666666665
Q ss_pred CcccccccCCCCCCHHHHHHHcCCHHHHHHhhhc
Q 043760 142 DFELLNAKDDYGMTILLLAVADKQIEAIKFLTTS 175 (345)
Q Consensus 142 ~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ 175 (345)
++.+|..|+||||+|+..|+.+++++|++.
T Consensus 61 ----~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ 90 (93)
T 1n0q_A 61 ----VNAKDKNGRTPLHLAARNGHLEVVKLLLEA 90 (93)
T ss_dssp ----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred ----CCccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 556666666666666666666666666665
No 108
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.87 E-value=1.5e-22 Score=153.96 Aligned_cols=107 Identities=31% Similarity=0.374 Sum_probs=69.1
Q ss_pred cCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHHHH
Q 043760 58 LDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLL 137 (345)
Q Consensus 58 ~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~ 137 (345)
+|..|+||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|+.+++++|++.+++
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---------------- 67 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADV-NARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD---------------- 67 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCS-SCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCC----------------
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC----------------
Confidence 4566666666666666666666666666665 55666666666666666666666666666665
Q ss_pred HhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhcCCccccccCCCCCcH
Q 043760 138 ENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTSTAIEVNAVTANGFTA 190 (345)
Q Consensus 138 ~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~g~T~ 190 (345)
++.+|..|.||||+|+..|+.+++++|+++ |+++|.++..|.||
T Consensus 68 --------~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~-ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 68 --------VNARSKDGNTPEHLAKKNGHHEIVKLLDAK-GADVNARSWGSSHH 111 (115)
T ss_dssp --------TTCCCTTCCCTTHHHHTTTCHHHHHHHHTT-SSSHHHHSCCCC--
T ss_pred --------CcccCCCCCCHHHHHHHCCCHHHHHHHHHc-CCCCCcCCcccccc
Confidence 566666666666666666666666666666 66666666666665
No 109
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.87 E-value=4.6e-22 Score=181.58 Aligned_cols=130 Identities=19% Similarity=0.116 Sum_probs=120.0
Q ss_pred CCCCchHHHHHHHc-CCHHHHHHHHhhCCCCCcCCC--CCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccHHH
Q 043760 59 DSRKSSALHIASQK-GYVGIVKALLQVIPDKCSDTD--VDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGSTEV 135 (345)
Q Consensus 59 d~~g~tpLh~A~~~-g~~~iv~~Ll~~~~~~~~~~d--~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~ 135 (345)
+..+.|+||.|+.. |+.+++++|+++|+++ +..+ ..|.||||+|+..|+.+++++|+++|++
T Consensus 196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadv-n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gad-------------- 260 (368)
T 3jue_A 196 SLHPGALLFRASGHPPSLPTMADALAHGADV-NWVNGGQDNATPLIQATAANSLLACEFLLQNGAN-------------- 260 (368)
T ss_dssp -CCHHHHHHHHTSSSCCHHHHHHHHHTTCCT-TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC--------------
T ss_pred cCCCCcHHHHHHHccCCHHHHHHHHHcCCCC-CccccccCCCCHHHHHHHCCCHHHHHHHHHcCCC--------------
Confidence 44567899999999 9999999999999999 6777 8999999999999999999999999998
Q ss_pred HHHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhcCCccccccCCCCCcHHHHHHhcCCCCchhhHHHHHHHccc
Q 043760 136 LLENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTSTAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELLRRAGA 215 (345)
Q Consensus 136 l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~~ga 215 (345)
+|.+|..|+||||+|+..|+.+++++||++ |++++.+|..|.||||+|+. .++.+++++|+..|.
T Consensus 261 ----------vn~~d~~G~TpLh~A~~~g~~~~v~~LL~~-Gad~~~~d~~G~TpL~~A~~----~g~~~iv~lLl~~~~ 325 (368)
T 3jue_A 261 ----------VNQADSAGRGPLHHATILGHTGLACLFLKR-GADLGARDSEGRDPLTIAME----TANADIVTLLRLAKM 325 (368)
T ss_dssp ----------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHH----TTCHHHHHHHHHHHC
T ss_pred ----------CCCCCCCCCCHHHHHHHcCcHHHHHHHHHC-cCCCCCcCCCCCCHHHHHHH----CCCHHHHHHHHHcCC
Confidence 899999999999999999999999999999 99999999999999999999 889999999999886
Q ss_pred ccc
Q 043760 216 ISA 218 (345)
Q Consensus 216 ~~~ 218 (345)
...
T Consensus 326 ~~~ 328 (368)
T 3jue_A 326 REA 328 (368)
T ss_dssp ---
T ss_pred Ccc
Confidence 543
No 110
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.87 E-value=5e-22 Score=189.34 Aligned_cols=128 Identities=23% Similarity=0.188 Sum_probs=117.8
Q ss_pred CchHHHHHHHcCCHHHHHHHHhhCCCCCcCC------CCCCCcHHHHHHH---cCcHHHHHHHHhcCCCcccccccCCcc
Q 043760 62 KSSALHIASQKGYVGIVKALLQVIPDKCSDT------DVDGRNPLHLAAM---RGHIDVLEELVRAKPDAASTRLIWVGS 132 (345)
Q Consensus 62 g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~------d~~g~tpLh~A~~---~g~~~iv~~Ll~~~~~~~~~~~~~~~~ 132 (345)
..+.||.|+..|+.++++.|++.|+++ +.. |..|.||||+|+. .|+.+++++|+++|++
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~-n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~----------- 199 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDF-GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH----------- 199 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCS-SSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCC-----------
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccc-cCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCC-----------
Confidence 347899999999999999999999998 555 8899999999976 8999999999999998
Q ss_pred HHHHHHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhcCCccccccCCCCCcHHHHHHhcCCCCchhhHHHHHHH
Q 043760 133 TEVLLENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTSTAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELLRR 212 (345)
Q Consensus 133 ~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~ 212 (345)
+|.+|..|+||||+|+..|+.+++++||++ |++++.+|..|+||||+|+. .++.+++++|++
T Consensus 200 -------------vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~----~~~~~~~~~Ll~ 261 (497)
T 3lvq_E 200 -------------LDAKAADGNTALHYAALYNQPDCLKLLLKG-RALVGTVNEAGETALDIARK----KHHKECEELLEQ 261 (497)
T ss_dssp -------------TTCCCSSSCCHHHHHTTTTCHHHHHHHHHT-CCCCSCCCTTCCCHHHHHHH----TTCHHHHHHHHH
T ss_pred -------------CCccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHH----cCCHHHHHHHHH
Confidence 899999999999999999999999999999 99999999999999999999 889999999999
Q ss_pred ccccccc
Q 043760 213 AGAISAK 219 (345)
Q Consensus 213 ~ga~~~~ 219 (345)
+||+...
T Consensus 262 ~ga~~~~ 268 (497)
T 3lvq_E 262 AQAGTFA 268 (497)
T ss_dssp TCC----
T ss_pred hCCCCCC
Confidence 9998865
No 111
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.87 E-value=4.7e-22 Score=177.26 Aligned_cols=126 Identities=24% Similarity=0.191 Sum_probs=118.9
Q ss_pred CchHHHHHHHcCCHHHHHHHHhhCCCCCcC------CCCCCCcHHHHHHHc---CcHHHHHHHHhcCCCcccccccCCcc
Q 043760 62 KSSALHIASQKGYVGIVKALLQVIPDKCSD------TDVDGRNPLHLAAMR---GHIDVLEELVRAKPDAASTRLIWVGS 132 (345)
Q Consensus 62 g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~------~d~~g~tpLh~A~~~---g~~~iv~~Ll~~~~~~~~~~~~~~~~ 132 (345)
+.++||.|+..|+.+.++.|++.|+++ +. .+..|.||||+|+.. |+.+++++|+++|++
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~-~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad----------- 218 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDF-GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH----------- 218 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC-----------
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcc-cccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC-----------
Confidence 457799999999999999999999998 44 689999999999997 899999999999998
Q ss_pred HHHHHHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHhhhcCCccccccCCCCCcHHHHHHhcCCCCchhhHHHHHHH
Q 043760 133 TEVLLENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFLTTSTAIEVNAVTANGFTAWDILAQSKRDIKDWDTGELLRR 212 (345)
Q Consensus 133 ~~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~g~T~L~~a~~~~~~~~~~~i~~~L~~ 212 (345)
++.+|..|+||||+|+..|+.+++++|++. |++++.+|..|+||||+|+. .++.+++++|++
T Consensus 219 -------------vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~-gad~~~~d~~G~TpL~~A~~----~~~~~iv~~Ll~ 280 (301)
T 2b0o_E 219 -------------LDAKAADGNTALHYAALYNQPDCLKLLLKG-RALVGTVNEAGETALDIARK----KHHKECEELLEQ 280 (301)
T ss_dssp -------------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCCSCCCTTSCCHHHHHHH----HTCHHHHHHHHH
T ss_pred -------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHH----cCCHHHHHHHHH
Confidence 899999999999999999999999999998 99999999999999999999 788999999999
Q ss_pred ccccc
Q 043760 213 AGAIS 217 (345)
Q Consensus 213 ~ga~~ 217 (345)
.|++.
T Consensus 281 ~ga~~ 285 (301)
T 2b0o_E 281 AQAGT 285 (301)
T ss_dssp HHHHT
T ss_pred hcCCC
Confidence 99974
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.87 E-value=4.5e-22 Score=151.40 Aligned_cols=107 Identities=30% Similarity=0.373 Sum_probs=100.3
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHHHH
Q 043760 24 VNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLHLA 103 (345)
Q Consensus 24 ~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A 103 (345)
+|..|+||||+|+..|+.+++++|++.+.++ +.+|..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~tpl~~A 82 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADV-NARSKDGNTPLHLAAKNGHAEIVKLLLAKGADV-NARSKDGNTPEHLA 82 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCS-SCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCT-TCCCTTCCCTTHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCCHHHHH
Confidence 4889999999999999999999999999997 889999999999999999999999999999998 78999999999999
Q ss_pred HHcCcHHHHHHHHhcCCCcccccccCCccHHHHHHhcCCcccccccCCCCCCH
Q 043760 104 AMRGHIDVLEELVRAKPDAASTRLIWVGSTEVLLENMGDFELLNAKDDYGMTI 156 (345)
Q Consensus 104 ~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~g~t~ 156 (345)
+..|+.+++++|+++|++ +|.++..|.+|
T Consensus 83 ~~~~~~~~~~~Ll~~ga~------------------------~n~~~~~~~~~ 111 (115)
T 2l6b_A 83 KKNGHHEIVKLLDAKGAD------------------------VNARSWGSSHH 111 (115)
T ss_dssp HTTTCHHHHHHHHTTSSS------------------------HHHHSCCCC--
T ss_pred HHCCCHHHHHHHHHcCCC------------------------CCcCCcccccc
Confidence 999999999999999999 78888888876
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.80 E-value=2.2e-19 Score=135.41 Aligned_cols=91 Identities=24% Similarity=0.331 Sum_probs=85.2
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHhcCCCCcccccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHHH
Q 043760 23 TVNCLSETPLHVAALLGHEDFAKEILPQKPRIAEELDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLHL 102 (345)
Q Consensus 23 ~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~ 102 (345)
..+.+|.||||+|+..|+.+++++|++.+.++ +.+|..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+
T Consensus 19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i-~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~ 96 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQDDEVRILMANGADV-AAKDKNGSTPLHLAARNGHLEVVKLLLEAGADV-XAQDKFGKTAFDI 96 (110)
T ss_dssp ---CCHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHH
T ss_pred ccCCccchHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccccCCCcHHHH
Confidence 34888999999999999999999999999988 888999999999999999999999999999998 8899999999999
Q ss_pred HHHcCcHHHHHHH
Q 043760 103 AAMRGHIDVLEEL 115 (345)
Q Consensus 103 A~~~g~~~iv~~L 115 (345)
|+..|+.+++++|
T Consensus 97 A~~~~~~~~~~~L 109 (110)
T 2zgd_A 97 SIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHTCHHHHHHH
T ss_pred HHHcCCHHHHHHh
Confidence 9999999999886
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.79 E-value=5.1e-19 Score=133.41 Aligned_cols=94 Identities=28% Similarity=0.423 Sum_probs=85.2
Q ss_pred cccccCCCCchHHHHHHHcCCHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccccCCccH
Q 043760 54 IAEELDSRKSSALHIASQKGYVGIVKALLQVIPDKCSDTDVDGRNPLHLAAMRGHIDVLEELVRAKPDAASTRLIWVGST 133 (345)
Q Consensus 54 ~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~ 133 (345)
.....|.+|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|+.+++++|+++|++
T Consensus 16 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i-~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~------------ 82 (110)
T 2zgd_A 16 RGSHMGSDLGKKLLEAARAGQDDEVRILMANGADV-AAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD------------ 82 (110)
T ss_dssp ------CCHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC------------
T ss_pred cccccCCccchHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------
Confidence 34667899999999999999999999999999998 78899999999999999999999999999988
Q ss_pred HHHHHhcCCcccccccCCCCCCHHHHHHHcCCHHHHHHh
Q 043760 134 EVLLENMGDFELLNAKDDYGMTILLLAVADKQIEAIKFL 172 (345)
Q Consensus 134 ~~l~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~L 172 (345)
++.+|..|+||||+|+..|+.+++++|
T Consensus 83 ------------~~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 83 ------------VXAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp ------------TTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred ------------ccccccCCCcHHHHHHHcCCHHHHHHh
Confidence 899999999999999999999999986
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=27.37 E-value=44 Score=18.72 Aligned_cols=18 Identities=28% Similarity=0.335 Sum_probs=12.4
Q ss_pred HHHHHHcCCHHHHHHHHh
Q 043760 66 LHIASQKGYVGIVKALLQ 83 (345)
Q Consensus 66 Lh~A~~~g~~~iv~~Ll~ 83 (345)
+..||..|+.+.++.|-.
T Consensus 17 iyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHTTSCHHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHHH
Confidence 466777777777776643
No 116
>1znp_A Hypothetical protein ATU3615; NESG, ATR55, Q8U9W0, structural genomics, PSI, protein struc initiative; 2.50A {Agrobacterium tumefaciens str} SCOP: b.82.1.16
Probab=27.03 E-value=20 Score=27.45 Aligned_cols=43 Identities=19% Similarity=0.231 Sum_probs=30.6
Q ss_pred cCCCCCcccccchhhhhhchhccccccccccccc---cccceeeeccCCCCCCCC
Q 043760 285 VDPPQSPELAASSFVVWNTIGVDARFRFSSFYDQ---DLCSINFITTRGSPRKAS 336 (345)
Q Consensus 285 ~t~PGG~~~~~~~f~~~~~~~l~~~~~~~~f~~~---~~~~~~~~~~~~~~~~~~ 336 (345)
+.||+| .|+.....+.|++.+-+++ +..+..+....-.|+.+|
T Consensus 101 ~vVP~G---------~WqaA~~~g~~~LVsCtVaPGF~f~dFel~~~~~~p~~~~ 146 (154)
T 1znp_A 101 VIVPAN---------CWQSAESLGDFTLVGCTVSPGFAFSSFVMAEPGWSPGDAP 146 (154)
T ss_dssp EEECTT---------CEEEEEESSSEEEEEEEESSCCCGGGEEECCTTCCCC---
T ss_pred EEEcCC---------EEEEeeECCCeEEEEEEecCCCcccccEecCCCCCCCCCc
Confidence 467999 7777656678888888888 788888877665565554
No 117
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=24.84 E-value=1.6e+02 Score=26.48 Aligned_cols=49 Identities=16% Similarity=0.114 Sum_probs=28.4
Q ss_pred HHHcCCHHHHHHHhcCCCCccccc-------------CCCCchHHHHHHHcCCHHHHHHHHh
Q 043760 35 AALLGHEDFAKEILPQKPRIAEEL-------------DSRKSSALHIASQKGYVGIVKALLQ 83 (345)
Q Consensus 35 Aa~~g~~~~v~~Ll~~~~~~~~~~-------------d~~g~tpLh~A~~~g~~~iv~~Ll~ 83 (345)
.+..|+...|+..+..|.+..... -..|.|.+|+|++..+.+++..|+.
T Consensus 29 gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 29 GVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 344577778887777776652111 1345555666666666665555554
No 118
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=22.86 E-value=2.4e+02 Score=25.29 Aligned_cols=50 Identities=20% Similarity=0.135 Sum_probs=39.5
Q ss_pred HHHHcCCHHHHHHHHhhCCCCCcCC-------------CCCCCcHHHHHHHcCcHHHHHHHHh
Q 043760 68 IASQKGYVGIVKALLQVIPDKCSDT-------------DVDGRNPLHLAAMRGHIDVLEELVR 117 (345)
Q Consensus 68 ~A~~~g~~~iv~~Ll~~~~~~~~~~-------------d~~g~tpLh~A~~~g~~~iv~~Ll~ 117 (345)
+.+..|+...|+.-+..|.++...- -.-|.|.+|+|++..+.+++..|+.
T Consensus 28 ~gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 28 VGVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 3456788888888888877764221 1359999999999999999999987
Done!