Query 043762
Match_columns 443
No_of_seqs 199 out of 1662
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 13:50:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043762.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043762hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2x0b_A Renin; hydrolase-hormon 100.0 2.7E-59 9.2E-64 462.8 21.1 305 59-431 53-383 (383)
2 3vla_A EDGP; extracellular, in 100.0 1.8E-58 6.2E-63 461.7 26.8 354 37-431 6-399 (413)
3 3psg_A Pepsinogen; hydrolase(a 100.0 1.3E-58 4.3E-63 457.1 23.9 305 57-431 46-370 (370)
4 1tzs_A Cathepsin E; hydrolase, 100.0 4.5E-57 1.5E-61 444.0 28.1 312 58-436 14-347 (351)
5 3aup_A SBG7S, BG, basic 7S glo 100.0 8.2E-57 2.8E-61 450.0 26.1 336 65-436 19-398 (403)
6 1mpp_A Pepsin; hydrolase(acid 100.0 1.4E-56 4.6E-61 442.5 22.7 313 60-436 11-360 (361)
7 3cms_A Chymosin B; hydrolase, 100.0 4.8E-57 1.6E-61 438.9 18.9 301 59-431 6-323 (323)
8 4aa9_A Chymosin; hydrolase, as 100.0 7.3E-57 2.5E-61 437.4 19.3 302 58-431 2-320 (320)
9 1am5_A Pepsin, acid proteinase 100.0 4.4E-56 1.5E-60 432.4 24.6 301 59-431 4-324 (324)
10 1dpj_A Proteinase A; proteinas 100.0 2E-56 6.7E-61 435.8 19.9 302 59-431 5-329 (329)
11 1htr_B Gastricsin; aspartyl pr 100.0 1.6E-55 5.5E-60 429.4 23.1 304 58-431 4-329 (329)
12 3c9x_A Trichoderma reesei aspa 100.0 5.3E-55 1.8E-59 425.4 26.4 300 64-430 12-329 (329)
13 3k1w_A Renin; protease, altern 100.0 1.3E-55 4.5E-60 432.4 20.6 305 59-431 10-340 (341)
14 1qdm_A Prophytepsin; aspartic 100.0 1.1E-54 3.8E-59 441.1 26.6 327 56-431 41-478 (478)
15 2apr_A Rhizopuspepsin; hydrola 100.0 7E-55 2.4E-59 423.9 23.8 293 65-431 13-324 (325)
16 1oew_A Endothiapepsin; hydrola 100.0 1E-54 3.5E-59 423.4 23.4 298 65-430 13-329 (329)
17 3fv3_A SAPP1P-secreted asparti 100.0 2.5E-54 8.5E-59 422.9 25.0 289 67-434 12-332 (339)
18 1j71_A Candidapepsin, aspartic 100.0 7.3E-55 2.5E-59 425.5 18.9 286 66-434 11-327 (334)
19 1miq_A Plasmepsin; aspartic pr 100.0 1E-54 3.4E-59 430.1 18.5 301 57-431 52-374 (375)
20 2qzx_A Candidapepsin-5; aspart 100.0 1.4E-53 4.7E-58 417.9 25.9 294 66-434 11-334 (342)
21 3qvc_A Histo-aspartic protease 100.0 3.7E-54 1.3E-58 433.4 21.8 301 57-431 127-449 (451)
22 3pvk_A Candidapepsin-2; hydrol 100.0 1.7E-53 5.8E-58 417.5 24.1 295 66-434 11-334 (342)
23 1ibq_A Aspergillopepsin; aspar 100.0 7.1E-53 2.4E-57 409.8 26.0 296 65-431 12-325 (325)
24 1yg9_A Aspartic protease BLA G 100.0 1.3E-53 4.5E-58 415.7 20.1 298 58-431 8-329 (330)
25 3lpj_A Beta-secretase 1; alzhe 100.0 7.2E-53 2.5E-57 427.8 26.2 326 60-436 67-425 (455)
26 2ewy_A Beta-secretase 2; BACE2 100.0 1.1E-52 3.9E-57 417.8 26.6 323 59-435 5-359 (383)
27 2bju_A Plasmepsin II; aspartic 100.0 1.2E-53 4E-58 429.2 18.4 301 59-431 130-450 (453)
28 1izd_A Aspartic proteinase; su 100.0 5.4E-53 1.9E-57 410.1 22.2 293 65-431 13-323 (323)
29 3vf3_A Beta-secretase 1; struc 100.0 3.3E-52 1.1E-56 416.9 26.7 326 60-436 21-379 (402)
30 2qp8_A Beta-secretase 1; BACE1 100.0 6.1E-52 2.1E-56 414.0 27.1 325 58-435 12-371 (395)
31 1t6e_X Xylanase inhibitor; two 100.0 5.7E-52 1.9E-56 412.0 26.7 324 65-432 12-374 (381)
32 1bxo_A Protein (penicillopepsi 100.0 1E-52 3.5E-57 408.3 19.7 293 65-431 13-323 (323)
33 1wkr_A Polyporopepsin; hydrola 100.0 4E-51 1.4E-55 400.2 20.8 298 67-437 12-339 (340)
34 1b5f_A Protein (cardosin A); h 100.0 1.8E-42 6.3E-47 321.4 16.0 216 59-317 5-236 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 1.5E-36 5.2E-41 282.4 18.7 222 169-431 1-241 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 1.1E-22 3.8E-27 160.0 5.9 86 60-170 6-96 (97)
37 1b5f_B Protein (cardosin A); h 99.7 6E-17 2.1E-21 125.0 7.1 82 339-431 4-87 (87)
38 2i1a_A DNA damage-inducible pr 94.8 0.022 7.5E-07 47.4 4.0 29 66-96 24-52 (148)
39 2i1a_A DNA damage-inducible pr 92.0 0.31 1.1E-05 40.2 6.4 27 403-429 109-135 (148)
40 3s8i_A Protein DDI1 homolog 1; 88.0 1 3.5E-05 37.2 6.3 28 403-430 108-135 (148)
41 1fmb_A EIAV protease; hydrolas 85.9 0.77 2.6E-05 35.4 4.1 25 70-96 10-34 (104)
42 2hs1_A HIV-1 protease; ultra-h 85.4 0.89 3E-05 34.7 4.1 25 70-96 10-34 (99)
43 3ec0_A Protease; HIV-2, inhibi 81.4 1.5 5.1E-05 33.3 3.9 25 70-96 10-34 (99)
44 3s8i_A Protein DDI1 homolog 1; 77.6 1.9 6.4E-05 35.6 3.7 27 68-96 24-50 (148)
45 2hah_A Protease, retropepsin; 76.6 2.3 8E-05 33.3 3.8 24 70-96 16-39 (116)
46 3liy_A Protease; hydrolase, hy 72.6 3.5 0.00012 32.0 3.8 27 70-96 12-41 (116)
47 3sqf_A Protease; folded monome 69.9 4.8 0.00016 31.4 4.1 25 70-96 11-35 (114)
48 2rsp_A RSV protease; hydrolase 66.5 5.9 0.0002 31.4 4.0 21 75-97 27-47 (124)
49 3slz_A GAG-Pro-POL polyprotein 64.8 6.3 0.00022 31.6 4.0 26 69-96 23-48 (132)
50 3ka2_A [L-Ala51;Gly51']HIV-1 p 58.2 8.7 0.0003 33.2 3.9 25 70-96 10-34 (203)
51 3ka2_A [L-Ala51;Gly51']HIV-1 p 32.8 39 0.0013 29.1 3.9 25 70-96 114-138 (203)
52 1bxo_A Protein (penicillopepsi 26.7 44 0.0015 30.8 3.6 30 261-308 15-44 (323)
53 2hah_A Protease, retropepsin; 26.5 26 0.0009 27.3 1.6 30 262-307 11-40 (116)
54 1ibq_A Aspergillopepsin; aspar 26.4 42 0.0014 31.0 3.4 16 293-308 28-43 (325)
55 3slz_A GAG-Pro-POL polyprotein 25.6 37 0.0013 27.1 2.4 25 269-308 26-50 (132)
56 3ec0_A Protease; HIV-2, inhibi 25.3 23 0.00078 26.7 1.0 29 263-306 6-34 (99)
57 1izd_A Aspartic proteinase; su 24.2 53 0.0018 30.3 3.7 16 293-308 29-44 (323)
58 1mpp_A Pepsin; hydrolase(acid 21.9 79 0.0027 29.5 4.4 44 240-308 4-49 (361)
No 1
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=2.7e-59 Score=462.83 Aligned_cols=305 Identities=23% Similarity=0.352 Sum_probs=252.8
Q ss_pred CCCCCccceEEEEEEEeCCCCceEEEEEeCCCCeeEEeCCCC-----CCCCCCCCCCCCCCCcCccCCCCcccCCCCCCC
Q 043762 59 NKLPFHHNVSLTVSLTVGTPPQNVSMVLDTGSELSWLHCNNT-----RYSYPNAFDPNLSSSYKPVTCSSPTCVNRTRDF 133 (443)
Q Consensus 59 ~~l~~~~~~~y~~~i~vGtP~Q~~~l~lDTGSs~~wv~c~~c-----~~~~~~~y~p~~Sst~~~~~c~~~~c~~~~~~~ 133 (443)
.+|.++.+..|+++|+||||||+++|+|||||+++||+|..| .|..|+.|||++|+|++...
T Consensus 53 ~~l~n~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C~~~~~y~~~~SsT~~~~~------------- 119 (383)
T 2x0b_A 53 VILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNG------------- 119 (383)
T ss_dssp EEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHHHTSCCBCGGGCTTCEEEE-------------
T ss_pred EeeeecCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCcccccCCCCCCCCCCCcEEECC-------------
Confidence 457777888999999999999999999999999999999998 47788999999999998754
Q ss_pred CCCCCCCCCCCCceEEecCCCCceeeeEEEEEEEeCCccccceEEeEeeccccCCCCCCCCccccccccCCCcc------
Q 043762 134 TIPVSCDNNSLCHATLSYADASSSEGNLASDQFFIGSSEISGLVFGCMDSVFSSSSDEDGKNTGLMGMNRGSLS------ 207 (443)
Q Consensus 134 ~~~~~c~~~~~c~~~i~Y~~g~~~~G~~~~D~v~i~~~~~~~~~fg~a~~~~~~~~~~~~~~~GIlGLg~~~~s------ 207 (443)
|.|.+.|++| ++.|.+++|+|++++.+++ +.|||++.+.+. .+....++||||||++.++
T Consensus 120 -----------~~~~i~Yg~G-s~~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~g~-~f~~~~~dGIlGLg~~~~s~~~~~~ 185 (383)
T 2x0b_A 120 -----------TELTLRYSTG-TVSGFLSQDIITVGGITVT-QMFGEVTEMPAL-PFMLAEFDGVVGMGFIEQAIGRVTP 185 (383)
T ss_dssp -----------EEEEEECSSC-EEEEEEEEEEEEETTEEEE-EEEEEEEECCHH-HHTTCSSSEEEECSCGGGCGGGCCC
T ss_pred -----------cEEEEEcCCc-cEEEEEEeeEEEEcCceEE-EEEEEEEecCCc-ccccCCCceEeccCCCccccCCCCc
Confidence 5699999999 5999999999999999999 999999986431 2345679999999998876
Q ss_pred ----hhhh--cccCeEEEEecCCC-----CceeEEeCCCCCC-CCCCceeeeecccCCCCCCCCCeeEEEEEceEEecCe
Q 043762 208 ----FVSQ--MGFPKFSYCISGAD-----FSGLLLLGDADLP-WLLPLNYTPLIQMTTPLPYFDRVAYTVQLEGIKVLDK 275 (443)
Q Consensus 208 ----~~~q--l~~~~Fs~~L~~~~-----~~G~l~fGg~d~~-~~g~l~~~p~~~~~~~~~~~~~~~w~v~l~~i~v~~~ 275 (443)
+++| +.+++||+||++.. .+|+|+|||+|++ |.|++.|+|+... .+|+|.+++|+|+++
T Consensus 186 ~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~~---------~~w~v~l~~i~v~~~ 256 (383)
T 2x0b_A 186 IFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKT---------GVWQIQMKGVSVGSS 256 (383)
T ss_dssp HHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSST---------TSCEEEECEEEESSC
T ss_pred HHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCCC---------ceEEEEEeEEEeCCc
Confidence 3344 45699999998853 2899999999975 9999999999865 689999999999998
Q ss_pred ecCCCCCccccCCCCCCcEEEcccCccccccHHHHHHHHHHHHHHhhhhhhhccCccccccCCcccceecCCCCCCCCCC
Q 043762 276 LLPIPRSVFVPDHTGAGQTMVDSGTQFTFLLGPAYAALRTEFLNQTASILKVLEDQNFVFQGAMDLCYRVPQNQSRLPQL 355 (443)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~ailDTGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~ 355 (443)
.+. +..+..+|+||||+++++|.+++++|.+++. ... .... +..+|+.. +.+
T Consensus 257 ~~~---------~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~----a~~---~~g~-----~~v~C~~~-------~~~ 308 (383)
T 2x0b_A 257 TLL---------CEDGCLALVDTGASYISGSTSSIEKLMEALG----AKK---RLFD-----YVVKCNEG-------PTL 308 (383)
T ss_dssp CCB---------STTCEEEEECTTCSSEEECHHHHHHHHHHHT----CEE---CSSC-----EEEEGGGT-------TTC
T ss_pred eEE---------cCCCcEEEEcCCCceEEcCHHHHHHHHHHhC----Ccc---cCCc-----EEEecccc-------ccC
Confidence 742 3456789999999999999999999777762 211 1111 34567664 689
Q ss_pred CeEEEEEeCcEEEEcCCceeEecCCcccCCCceEEE-EEEcCCC--CCCCceeecccceeeeEEEEeCCCCEEEEEcCC
Q 043762 356 PAVSLVFRGAEMSVSGDRLLYRAPGEVRGIDSVYCF-TFGNSDL--LGVEAYVIGHHHQQNVWMEFDLERSRIGMAQVR 431 (443)
Q Consensus 356 p~i~~~f~g~~~~i~~~~~i~~~~~~~~~~~~~~C~-~i~~~~~--~~~~~~iLG~~fl~~~y~vfD~~~~riGfa~~~ 431 (443)
|+|+|+|+|.+|+|++++|+++.. ..++..|+ +|+..+. ...+.||||++|||++|+|||++++|||||+++
T Consensus 309 P~i~f~~~g~~~~l~~~~yi~~~~----~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 309 PDISFHLGGKEYTLTSADYVFQES----YSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 383 (383)
T ss_dssp CCEEEEETTEEEEECHHHHBCCCC----CCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ceEEEEECCEEEEECHHHhEeecc----CCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeEEEcC
Confidence 999999999999999999998741 12245898 4876542 123679999999999999999999999999975
No 2
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=1.8e-58 Score=461.67 Aligned_cols=354 Identities=22% Similarity=0.452 Sum_probs=283.2
Q ss_pred CCeEEEeecccCCCCCCCCCCCCCCCCccceEEEEEEEeCCCCceEEEEEeCCCCeeEEeCCCCCCCCCCCCCCCCCCCc
Q 043762 37 PDVLILPLRTQEIPSGSFPRSPNKLPFHHNVSLTVSLTVGTPPQNVSMVLDTGSELSWLHCNNTRYSYPNAFDPNLSSSY 116 (443)
Q Consensus 37 ~~~~~lpl~~~~~~~~~~~~~~~~l~~~~~~~y~~~i~vGtP~Q~~~l~lDTGSs~~wv~c~~c~~~~~~~y~p~~Sst~ 116 (443)
+.++.+||++.. .+..|+++|+||||||++.|+|||||+++||+|+.| .+|+|+
T Consensus 6 ~~~~~~pv~~d~----------------~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c----------~~Sst~ 59 (413)
T 3vla_A 6 PSALVVPVKKDA----------------STLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN----------YVSSTY 59 (413)
T ss_dssp CSEEEEEEEECT----------------TTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS----------CCCTTC
T ss_pred CccEEEEeeecC----------------CCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC----------CCCCCc
Confidence 567889999764 234599999999999999999999999999999975 379999
Q ss_pred CccCCCCcccCCCCCCCC------CCCCCCCCCCCceEEec-CCCCceeeeEEEEEEEeCC---------ccccceEEeE
Q 043762 117 KPVTCSSPTCVNRTRDFT------IPVSCDNNSLCHATLSY-ADASSSEGNLASDQFFIGS---------SEISGLVFGC 180 (443)
Q Consensus 117 ~~~~c~~~~c~~~~~~~~------~~~~c~~~~~c~~~i~Y-~~g~~~~G~~~~D~v~i~~---------~~~~~~~fg~ 180 (443)
+.+.|.++.|...++.-. ..+.|. ++.|.|.+.| ++++.+.|.+++|+|+|++ .+++++.|||
T Consensus 60 ~~v~C~s~~C~~~~~~~~~~c~s~~~~~c~-~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc 138 (413)
T 3vla_A 60 RPVRCRTSQCSLSGSIACGDCFNGPRPGCN-NNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSC 138 (413)
T ss_dssp EECBTTSHHHHHTTCCEEECCSSCCBTTBC-SSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEE
T ss_pred CccCCCcccccccccCCCcccccCCCCCCC-CCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEEC
Confidence 999999999987554211 012343 4679999999 4888999999999999972 4778999999
Q ss_pred eeccccCCCCCCCCccccccccCCCcchhhhccc-----CeEEEEecCC-CCceeEEeCCCCCC------CCCC-ceeee
Q 043762 181 MDSVFSSSSDEDGKNTGLMGMNRGSLSFVSQMGF-----PKFSYCISGA-DFSGLLLLGDADLP------WLLP-LNYTP 247 (443)
Q Consensus 181 a~~~~~~~~~~~~~~~GIlGLg~~~~s~~~ql~~-----~~Fs~~L~~~-~~~G~l~fGg~d~~------~~g~-l~~~p 247 (443)
++.+... .....++||||||++.+|++.|+.. ++||+||.+. +.+|.|+||+.|.. +.|+ ++|+|
T Consensus 139 ~~~~~~~--g~~~~~dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tP 216 (413)
T 3vla_A 139 APTSLLQ--NLASGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTP 216 (413)
T ss_dssp ECGGGGT--TSCTTCCEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEE
T ss_pred ccccccc--CcccccccccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEee
Confidence 9986422 2345799999999999999999765 8999999874 36899999999853 6788 99999
Q ss_pred ecccCCC--CCCCC---CeeEEEEEceEEecCeecCCCCCccccCCCCCCcEEEcccCccccccHHHHHHHHHHHHHHhh
Q 043762 248 LIQMTTP--LPYFD---RVAYTVQLEGIKVLDKLLPIPRSVFVPDHTGAGQTMVDSGTQFTFLLGPAYAALRTEFLNQTA 322 (443)
Q Consensus 248 ~~~~~~~--~~~~~---~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~ailDTGt~~~~lp~~~~~~l~~~~~~~~~ 322 (443)
++..... .++.+ ..+|.|+|++|+|+++.+.+++..+..+.++++.+||||||++++||.++|++|.+++.+++.
T Consensus 217 l~~~~~~~~~~~~~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~ 296 (413)
T 3vla_A 217 LLTNPVSTSATSTQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESA 296 (413)
T ss_dssp CBCCSSCCSSSCCTTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHH
T ss_pred cccCCccccccccccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhc
Confidence 9876321 11111 268999999999999999988888776655678899999999999999999999999988765
Q ss_pred h--hhhhccCccccccCCcccceecCCCC--CCCCCCCeEEEEEeC--cEEEEcCCceeEecCCcccCCCceEEEEEEcC
Q 043762 323 S--ILKVLEDQNFVFQGAMDLCYRVPQNQ--SRLPQLPAVSLVFRG--AEMSVSGDRLLYRAPGEVRGIDSVYCFTFGNS 396 (443)
Q Consensus 323 ~--~~~~~~~~~~~~~~~~~~C~~~~~~~--~~~~~~p~i~~~f~g--~~~~i~~~~~i~~~~~~~~~~~~~~C~~i~~~ 396 (443)
. .... .. ..++..|+..++.. ..+..+|+|+|+|+| .+|+|++++|+++. ..+..|++++..
T Consensus 297 ~~~~~~~-~~-----~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~------~~~~~Cl~~~~~ 364 (413)
T 3vla_A 297 ARNITRV-AS-----VAPFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYI------NDNVVCLGVVDG 364 (413)
T ss_dssp HTTCCEE-CC-----CTTCSCEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEE------ETTEEEECEEEE
T ss_pred ccCCCcC-CC-----CCCCcceeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEe------CCCcEEEEEEec
Confidence 2 1111 11 11367899987531 011379999999997 89999999999985 346789998775
Q ss_pred CCCCCCceeecccceeeeEEEEeCCCCEEEEEcCC
Q 043762 397 DLLGVEAYVIGHHHQQNVWMEFDLERSRIGMAQVR 431 (443)
Q Consensus 397 ~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfa~~~ 431 (443)
.....+.||||+.|||++|+|||++++|||||++.
T Consensus 365 ~~~~~~~~IlGd~fl~~~~vvfD~~~~riGfa~~~ 399 (413)
T 3vla_A 365 GSNLRTSIVIGGHQLEDNLVQFDLATSRVGFSGTL 399 (413)
T ss_dssp ESSCSSSEEECHHHHTTEEEEEETTTTEEEEEEEG
T ss_pred CCCcccceeEehhhhcCeEEEEECCCCEEEEEEec
Confidence 43223579999999999999999999999999965
No 3
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=1.3e-58 Score=457.15 Aligned_cols=305 Identities=22% Similarity=0.362 Sum_probs=251.4
Q ss_pred CCCCCCCccceEEEEEEEeCCCCceEEEEEeCCCCeeEEeCCCC---CCCCCCCCCCCCCCCcCccCCCCcccCCCCCCC
Q 043762 57 SPNKLPFHHNVSLTVSLTVGTPPQNVSMVLDTGSELSWLHCNNT---RYSYPNAFDPNLSSSYKPVTCSSPTCVNRTRDF 133 (443)
Q Consensus 57 ~~~~l~~~~~~~y~~~i~vGtP~Q~~~l~lDTGSs~~wv~c~~c---~~~~~~~y~p~~Sst~~~~~c~~~~c~~~~~~~ 133 (443)
...+|.++.+..|+++|+||||||+++|+|||||+++||+|..| .|..++.|+|++|+|++..+
T Consensus 46 ~~~~l~n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~~C~~~~~y~~~~SsT~~~~~------------- 112 (370)
T 3psg_A 46 GDEPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDHNQFNPDDSSTFEATS------------- 112 (370)
T ss_dssp CCCTTGGGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCEEEE-------------
T ss_pred ceecceeccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCcccCCCCCCCCccCcCcEECC-------------
Confidence 45789999999999999999999999999999999999998888 68889999999999998754
Q ss_pred CCCCCCCCCCCCceEEecCCCCceeeeEEEEEEEeCCccccceEEeEeeccccCCCCCCCCccccccccCCCcch-----
Q 043762 134 TIPVSCDNNSLCHATLSYADASSSEGNLASDQFFIGSSEISGLVFGCMDSVFSSSSDEDGKNTGLMGMNRGSLSF----- 208 (443)
Q Consensus 134 ~~~~~c~~~~~c~~~i~Y~~g~~~~G~~~~D~v~i~~~~~~~~~fg~a~~~~~~~~~~~~~~~GIlGLg~~~~s~----- 208 (443)
|.|.+.|++| ++.|.+++|+|++++.+++++.|||++.+.+ ..+....++||||||++.++.
T Consensus 113 -----------~~~~i~Yg~G-s~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~-~~~~~~~~dGIlGLg~~~~s~~~~~~ 179 (370)
T 3psg_A 113 -----------QELSITYGTG-SMTGILGYDTVQVGGISDTNQIFGLSETEPG-SFLYYAPFDGILGLAYPSISASGATP 179 (370)
T ss_dssp -----------EEEEEESSSC-EEEEEEEEEEEEETTEEEEEEEEEEECSCCC-GGGGGCSCSEEEECSCGGGCGGGCCC
T ss_pred -----------cEEEEEeCCc-eEEEEEEEEEEeeCCcccCCeEEEEEEeecc-cccccCCccceeccCCccccccCCCC
Confidence 4699999999 5999999999999999999999999998654 234556799999999987652
Q ss_pred -----hhh--cccCeEEEEecCCC-CceeEEeCCCCCC-CCCCceeeeecccCCCCCCCCCeeEEEEEceEEecCeecCC
Q 043762 209 -----VSQ--MGFPKFSYCISGAD-FSGLLLLGDADLP-WLLPLNYTPLIQMTTPLPYFDRVAYTVQLEGIKVLDKLLPI 279 (443)
Q Consensus 209 -----~~q--l~~~~Fs~~L~~~~-~~G~l~fGg~d~~-~~g~l~~~p~~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~ 279 (443)
.+| +.+++||+||++.+ .+|+|+|||+|++ |.|+++|+|+... .+|.|.+++|+|+++.+.
T Consensus 180 ~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~~~---------~~w~v~l~~i~v~g~~~~- 249 (370)
T 3psg_A 180 VFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSVE---------GYWQITLDSITMDGETIA- 249 (370)
T ss_dssp HHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSEE---------TTEEEEECEEESSSSEEE-
T ss_pred HHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeeccccc---------ceeEEEEeEEEECCEEEe-
Confidence 233 45699999999753 6899999999976 9999999999876 689999999999998764
Q ss_pred CCCccccCCCCCCcEEEcccCccccccHHHHHHHHHHHHHHhhhhhhhccCccccccCCcccceecCCCCCCCCCCCeEE
Q 043762 280 PRSVFVPDHTGAGQTMVDSGTQFTFLLGPAYAALRTEFLNQTASILKVLEDQNFVFQGAMDLCYRVPQNQSRLPQLPAVS 359 (443)
Q Consensus 280 ~~~~~~~~~~~~~~ailDTGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~p~i~ 359 (443)
+..+..++|||||+++++|.+++++|.+++ .... .... .+..+|... ..+|+|+
T Consensus 250 --------~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i----~a~~--~~~g-----~~~v~C~~~-------~~lP~i~ 303 (370)
T 3psg_A 250 --------CSGGCQAIVDTGTSLLTGPTSAIANIQSDI----GASE--NSDG-----EMVISCSSI-------DSLPDIV 303 (370)
T ss_dssp --------CTTCEEEEECTTCCSEEEEHHHHHHHHHHT----TCEE--CTTC-----CEECCGGGG-------GGCCCEE
T ss_pred --------cCCCceEEEcCCCCcEECCHHHHHHHHHHh----CCcc--cCCC-----cEEEECCCc-------ccCCcEE
Confidence 344678999999999999999999876665 2111 0111 123455543 6899999
Q ss_pred EEEeCcEEEEcCCceeEecCCcccCCCceEEEE-EEcCCCC--CCCceeecccceeeeEEEEeCCCCEEEEEcCC
Q 043762 360 LVFRGAEMSVSGDRLLYRAPGEVRGIDSVYCFT-FGNSDLL--GVEAYVIGHHHQQNVWMEFDLERSRIGMAQVR 431 (443)
Q Consensus 360 ~~f~g~~~~i~~~~~i~~~~~~~~~~~~~~C~~-i~~~~~~--~~~~~iLG~~fl~~~y~vfD~~~~riGfa~~~ 431 (443)
|+|+|.+++|++++|+.+. .+ .|+. |...+.. ..+.||||++|||++|+|||++++|||||+++
T Consensus 304 f~~~g~~~~l~~~~yi~~~-------~~-~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 304 FTIDGVQYPLSPSAYILQD-------DD-SCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp EEETTEEEEECHHHHEEEC-------SS-CEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred EEECCEEEEECHHHhcccC-------CC-EEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence 9999999999999999872 22 5985 7664321 12469999999999999999999999999985
No 4
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=4.5e-57 Score=443.97 Aligned_cols=312 Identities=21% Similarity=0.317 Sum_probs=252.7
Q ss_pred CCCCCCccceEEEEEEEeCCCCceEEEEEeCCCCeeEEeCCCC---CCCCCCCCCCCCCCCcCccCCCCcccCCCCCCCC
Q 043762 58 PNKLPFHHNVSLTVSLTVGTPPQNVSMVLDTGSELSWLHCNNT---RYSYPNAFDPNLSSSYKPVTCSSPTCVNRTRDFT 134 (443)
Q Consensus 58 ~~~l~~~~~~~y~~~i~vGtP~Q~~~l~lDTGSs~~wv~c~~c---~~~~~~~y~p~~Sst~~~~~c~~~~c~~~~~~~~ 134 (443)
..+|.++.+..|+++|+||||+|+++|+|||||+++||+|..| .|..++.|+|++|+|++...
T Consensus 14 ~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~~-------------- 79 (351)
T 1tzs_A 14 KEPLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACKTHSRFQPSQSSTYSQPG-------------- 79 (351)
T ss_dssp CCTTGGGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCBCCS--------------
T ss_pred ceeceecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCccccCCCCcCCcccCcceEECC--------------
Confidence 4677787888999999999999999999999999999999998 68889999999999998743
Q ss_pred CCCCCCCCCCCceEEecCCCCceeeeEEEEEEEeCCccccceEEeEeeccccCCCCCCCCccccccccCCCcc-------
Q 043762 135 IPVSCDNNSLCHATLSYADASSSEGNLASDQFFIGSSEISGLVFGCMDSVFSSSSDEDGKNTGLMGMNRGSLS------- 207 (443)
Q Consensus 135 ~~~~c~~~~~c~~~i~Y~~g~~~~G~~~~D~v~i~~~~~~~~~fg~a~~~~~~~~~~~~~~~GIlGLg~~~~s------- 207 (443)
|.|.+.|++| ++.|.+++|+|++++.+++++.|||++.+.+. .+....++||||||++..+
T Consensus 80 ----------~~~~i~Yg~G-s~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~-~~~~~~~~GilGLg~~~~s~~~~~~~ 147 (351)
T 1tzs_A 80 ----------QSFSIQYGTG-SLSGIIGADQVSVEGLTVVGQQFGESVTEPGQ-TFVDAEFDGILGLGYPSLAVGGVTPV 147 (351)
T ss_dssp ----------CEEEEESSSC-EEEEEEEEEEEEETTEEEEEEEEEEECSCCCG-GGGGCSCSEEEECSCGGGSGGGCCCH
T ss_pred ----------CEEEEEeCCC-CeEEEEEEeEEEECCeEECCeEEEEEEecccc-ccccCCCceEEecCCccccccCCCcH
Confidence 5799999999 58999999999999999999999999876431 2334578999999998765
Q ss_pred ---hhhh--cccCeEEEEecCCC---CceeEEeCCCCCC-CCCCceeeeecccCCCCCCCCCeeEEEEEceEEecCeecC
Q 043762 208 ---FVSQ--MGFPKFSYCISGAD---FSGLLLLGDADLP-WLLPLNYTPLIQMTTPLPYFDRVAYTVQLEGIKVLDKLLP 278 (443)
Q Consensus 208 ---~~~q--l~~~~Fs~~L~~~~---~~G~l~fGg~d~~-~~g~l~~~p~~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~ 278 (443)
+.+| +..++||+||++.. ..|.|+|||+|++ |.|++.|+|+... .+|.|.+++|+|+++.+.
T Consensus 148 ~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---------~~~~v~l~~i~v~~~~~~ 218 (351)
T 1tzs_A 148 FDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTKQ---------AYWQIALDNIQVGGTVMF 218 (351)
T ss_dssp HHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECSEE---------TTEEEEEEEEEETTEEEE
T ss_pred HHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecCCC---------ceEEEEeCEEEECCceEE
Confidence 2334 45699999998764 2899999999975 9999999999875 689999999999998753
Q ss_pred CCCCccccCCCCCCcEEEcccCccccccHHHHHHHHHHHHHHhhhhhhhccCccccccCCcccceecCCCCCCCCCCCeE
Q 043762 279 IPRSVFVPDHTGAGQTMVDSGTQFTFLLGPAYAALRTEFLNQTASILKVLEDQNFVFQGAMDLCYRVPQNQSRLPQLPAV 358 (443)
Q Consensus 279 ~~~~~~~~~~~~~~~ailDTGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~p~i 358 (443)
...+..++|||||+++++|.+++++|.+++.+ .. . . .. +..+|+.. ..+|+|
T Consensus 219 ---------~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~----~~-~-~-g~-----~~~~C~~~-------~~~P~i 270 (351)
T 1tzs_A 219 ---------CSEGCQAIVDTGTSLITGPSDKIKQLQNAIGA----AP-V-D-GE-----YAVECANL-------NVMPDV 270 (351)
T ss_dssp ---------CTTCEEEEECTTCSSEEECHHHHHHHHHHHTC----EE-C-S-SS-----EEECGGGG-------GGSCCE
T ss_pred ---------cCCCceEEeccCCcceeCCHHHHHHHHHHhCC----cc-c-C-Ce-----EEEeCCCC-------ccCCcE
Confidence 23456799999999999999999998776621 11 1 1 11 24567654 679999
Q ss_pred EEEEeCcEEEEcCCceeEecCCcccCCCceEEEE-EEcCCCC--CCCceeecccceeeeEEEEeCCCCEEEEEcCCCCch
Q 043762 359 SLVFRGAEMSVSGDRLLYRAPGEVRGIDSVYCFT-FGNSDLL--GVEAYVIGHHHQQNVWMEFDLERSRIGMAQVRCDLA 435 (443)
Q Consensus 359 ~~~f~g~~~~i~~~~~i~~~~~~~~~~~~~~C~~-i~~~~~~--~~~~~iLG~~fl~~~y~vfD~~~~riGfa~~~c~~~ 435 (443)
+|+|+|.+++|++++|+++.. ..++..|+. |+..+.. ..+.||||++|||++|+|||++++|||||+++|...
T Consensus 271 ~f~f~g~~~~i~~~~yi~~~~----~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~~~s~ 346 (351)
T 1tzs_A 271 TFTINGVPYTLSPTAYTLLDF----VDGMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVPWSH 346 (351)
T ss_dssp EEEETTEEEEECTTTSEECC---------CCEEESEEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC----
T ss_pred EEEECCEEEEECHHHhEeecc----CCCCCeEEEEEEECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECCcccc
Confidence 999999999999999998741 112457984 8765421 235799999999999999999999999999999864
Q ss_pred h
Q 043762 436 G 436 (443)
Q Consensus 436 ~ 436 (443)
.
T Consensus 347 ~ 347 (351)
T 1tzs_A 347 P 347 (351)
T ss_dssp -
T ss_pred h
Confidence 3
No 5
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=8.2e-57 Score=450.02 Aligned_cols=336 Identities=21% Similarity=0.392 Sum_probs=259.9
Q ss_pred cceEEEEEEEeCCCCceEEEEEeCCCCeeEEeCCCCCCCCCCCCCCCCCCCcCccCCCCcccCCCCCCC------CCCCC
Q 043762 65 HNVSLTVSLTVGTPPQNVSMVLDTGSELSWLHCNNTRYSYPNAFDPNLSSSYKPVTCSSPTCVNRTRDF------TIPVS 138 (443)
Q Consensus 65 ~~~~y~~~i~vGtP~Q~~~l~lDTGSs~~wv~c~~c~~~~~~~y~p~~Sst~~~~~c~~~~c~~~~~~~------~~~~~ 138 (443)
.+..|+++|.||||+|++.|+|||||+++||+|..| .+|+|++.+.|.++.|...++.. ...+.
T Consensus 19 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~----------~~Sst~~~~~C~s~~C~~~~~~~c~~c~~~~~s~ 88 (403)
T 3aup_A 19 STGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQ----------YSSKTYQAPFCHSTQCSRANTHQCLSCPAASRPG 88 (403)
T ss_dssp TTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSC----------CCCSSCBCCCTTBHHHHHTTCCCEEECSSSCBTT
T ss_pred CCceEEEEEECCCCCceeEEEEECCCCceeECCCCC----------CCCCCCCccCCCCccccCccccCccccCCCCCCC
Confidence 455699999999999999999999999999999874 47999999999999998755420 11234
Q ss_pred CCCCCCCceEEecC-CCCceeeeEEEEEEEeCC-----------ccccceEEeEeeccccCCCCCCCCccccccccCCCc
Q 043762 139 CDNNSLCHATLSYA-DASSSEGNLASDQFFIGS-----------SEISGLVFGCMDSVFSSSSDEDGKNTGLMGMNRGSL 206 (443)
Q Consensus 139 c~~~~~c~~~i~Y~-~g~~~~G~~~~D~v~i~~-----------~~~~~~~fg~a~~~~~~~~~~~~~~~GIlGLg~~~~ 206 (443)
|. ++.|.|.+.|+ +++.+.|.+++|+|+|++ .+++++.|||++.+... .+.....+||||||++.+
T Consensus 89 ~~-~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~-~~~~~~~dGIlGLg~~~~ 166 (403)
T 3aup_A 89 CH-KNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQ-KGLPRNTQGVAGLGHAPI 166 (403)
T ss_dssp BC-SSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGS-SSSSTTCCEEEECSSSTT
T ss_pred CC-CCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccc-cCCCCCCceEEECCCCCc
Confidence 53 36899999998 788999999999999987 67899999999986431 133567999999999999
Q ss_pred chhhhccc-----CeEEEEecCC-CCceeEEeCCCCCC-C--C-C-----CceeeeecccCCCCCCCCCeeEEEEEceEE
Q 043762 207 SFVSQMGF-----PKFSYCISGA-DFSGLLLLGDADLP-W--L-L-----PLNYTPLIQMTTPLPYFDRVAYTVQLEGIK 271 (443)
Q Consensus 207 s~~~ql~~-----~~Fs~~L~~~-~~~G~l~fGg~d~~-~--~-g-----~l~~~p~~~~~~~~~~~~~~~w~v~l~~i~ 271 (443)
+++.|+++ ++||+||.+. +..|.|+||| |+. | . | ++.|+|++... ..+|.|.|++|+
T Consensus 167 s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~-------~~~y~v~l~~i~ 238 (403)
T 3aup_A 167 SLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITL-------QGEYNVRVNSIR 238 (403)
T ss_dssp SHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECT-------TSCEEECEEEEE
T ss_pred CHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECC-CchhccccccccccCceeecccccCC-------CCcceEEEEEEE
Confidence 99888653 8999999874 4789999999 864 7 5 5 99999998762 158999999999
Q ss_pred ecCeec-CCCCCccccCCCCCCcEEEcccCccccccHHHHHHHHHHHHHHhhhhhhhccCccccccCCcccceecCCCCC
Q 043762 272 VLDKLL-PIPRSVFVPDHTGAGQTMVDSGTQFTFLLGPAYAALRTEFLNQTASILKVLEDQNFVFQGAMDLCYRVPQNQS 350 (443)
Q Consensus 272 v~~~~~-~~~~~~~~~~~~~~~~ailDTGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~ 350 (443)
|+++.+ .++...+.++..+...+||||||++++||+++|++|.+++.+++.......... ....|+..+ .
T Consensus 239 v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~------~~~~c~~c~--~- 309 (403)
T 3aup_A 239 INQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVA------PFGLCFNSN--K- 309 (403)
T ss_dssp ETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCCT------TCSCEECGG--G-
T ss_pred ECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCCC------CCCceEECC--C-
Confidence 999988 776666554445566799999999999999999999999876654322111111 123566432 1
Q ss_pred CCCCCCeEEEEEeCc---EEEEcCCceeEecCCcccCCCceEEEEEEcCCCCCCCceeecccceeeeEEEEeCCCCEEEE
Q 043762 351 RLPQLPAVSLVFRGA---EMSVSGDRLLYRAPGEVRGIDSVYCFTFGNSDLLGVEAYVIGHHHQQNVWMEFDLERSRIGM 427 (443)
Q Consensus 351 ~~~~~p~i~~~f~g~---~~~i~~~~~i~~~~~~~~~~~~~~C~~i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGf 427 (443)
...+|+|+|+|+|. +|+|++++|+++. .++..|++|+.......+.||||+.|||++|+|||++++||||
T Consensus 310 -~~~~P~i~f~f~g~~~~~~~l~~~~y~~~~------~~~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGf 382 (403)
T 3aup_A 310 -INAYPSVDLVMDKPNGPVWRISGEDLMVQA------QPGVTCLGVMNGGMQPRAEITLGARQLEENLVVFDLARSRVGF 382 (403)
T ss_dssp -CCCCCCEEEEESSTTCCEEEECHHHHEEEC---------CEEECEEECCSCCSSSEEECHHHHTTSCEEEETTTTEEEE
T ss_pred -cCcCCcEEEEEcCCCceEEEEcccceEEEc------CCCeEEEEEEcCCCCCCCcEEEChHHhcCeEEEEECCCCEEEE
Confidence 25799999999975 9999999999984 2356899988765422357999999999999999999999999
Q ss_pred -------EcCCCCchh
Q 043762 428 -------AQVRCDLAG 436 (443)
Q Consensus 428 -------a~~~c~~~~ 436 (443)
++++|++..
T Consensus 383 ~A~~~~~~~~~C~~~~ 398 (403)
T 3aup_A 383 STSSLHSHGVKCADLF 398 (403)
T ss_dssp ESSCGGGGTCCGGGSC
T ss_pred ecccccccCCCccccc
Confidence 666677643
No 6
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=1.4e-56 Score=442.48 Aligned_cols=313 Identities=19% Similarity=0.291 Sum_probs=254.9
Q ss_pred CCCCccceEEEEEEEeCCCCceEEEEEeCCCCeeEEeCCCCC----CCCCCCCCCCCCCCcCccCCCCcccCCCCCCCCC
Q 043762 60 KLPFHHNVSLTVSLTVGTPPQNVSMVLDTGSELSWLHCNNTR----YSYPNAFDPNLSSSYKPVTCSSPTCVNRTRDFTI 135 (443)
Q Consensus 60 ~l~~~~~~~y~~~i~vGtP~Q~~~l~lDTGSs~~wv~c~~c~----~~~~~~y~p~~Sst~~~~~c~~~~c~~~~~~~~~ 135 (443)
+|.++.+..|+++|+||||+|+++|+|||||+++||+|..|. |..++.|+|++|+|++...
T Consensus 11 ~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~--------------- 75 (361)
T 1mpp_A 11 GLYDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGKRFFDPSSSSTFKETD--------------- 75 (361)
T ss_dssp EEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSSCCBCGGGCTTCEEEE---------------
T ss_pred EeecCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCCCCcCCCccCCceEecC---------------
Confidence 445556778999999999999999999999999999999884 8788999999999998754
Q ss_pred CCCCCCCCCCceEEecCCCCceeeeEEEEEEEeCCccccceEEeEeeccccC----CCCCCCCccccccccCCCcchh--
Q 043762 136 PVSCDNNSLCHATLSYADASSSEGNLASDQFFIGSSEISGLVFGCMDSVFSS----SSDEDGKNTGLMGMNRGSLSFV-- 209 (443)
Q Consensus 136 ~~~c~~~~~c~~~i~Y~~g~~~~G~~~~D~v~i~~~~~~~~~fg~a~~~~~~----~~~~~~~~~GIlGLg~~~~s~~-- 209 (443)
|.|.+.|++|+ +.|.+++|+|++++.+++++.|||++...+. ..+.....+||||||++..+..
T Consensus 76 ---------~~~~i~Yg~Gs-~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~ 145 (361)
T 1mpp_A 76 ---------YNLNITYGTGG-ANGIYFRDSITVGGATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAMEA 145 (361)
T ss_dssp ---------EEEEEECSSCE-EEEEEEEEEEEETTEEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSHHHH
T ss_pred ---------CeEEEEECCce-EEEEEEEEEEEECCEEEeceEEEEEEeccCccccccccccCCCCCEEEeCCcccccccc
Confidence 56999999995 8999999999999999999999999987530 1244567899999999876542
Q ss_pred --------------hh--cccCeEEEEecCCCCceeEEeCCCCCC-CCCCceeeeecccCCCCCCCCCeeEEEEEceEEe
Q 043762 210 --------------SQ--MGFPKFSYCISGADFSGLLLLGDADLP-WLLPLNYTPLIQMTTPLPYFDRVAYTVQLEGIKV 272 (443)
Q Consensus 210 --------------~q--l~~~~Fs~~L~~~~~~G~l~fGg~d~~-~~g~l~~~p~~~~~~~~~~~~~~~w~v~l~~i~v 272 (443)
+| +..++||+||.+....|.|+|||+|++ |.|++.|+|+...... ..+|.|.|++|+|
T Consensus 146 ~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~-----~~~~~v~l~~i~v 220 (361)
T 1mpp_A 146 EYGDTYNTVHVNLYKQGLISSPVFSVYMNTNDGGGQVVFGGVNNTLLGGDIQYTDVLKSRGG-----YFFWDAPVTGVKI 220 (361)
T ss_dssp HHSCCCCCHHHHHHHTTSSSSSEEEEECCCSSSEEEEEESSCCGGGBSSCCEEEECEEETTE-----EEEEEEEEEEEEE
T ss_pred cccccCCCHHHHHHHcCCCCCcEEEEEecCCCCCcEEEEecCChhhcCCceEEEEcccCCCc-----eeEEEEEEeEEEE
Confidence 23 455999999987656899999999975 9999999999886311 1389999999999
Q ss_pred cCeecCCCCCccccCCCCCCcEE-EcccCccccccHHHHHHHHHHHHHHhhhhhhhccCccccccCCcccceecCCCCCC
Q 043762 273 LDKLLPIPRSVFVPDHTGAGQTM-VDSGTQFTFLLGPAYAALRTEFLNQTASILKVLEDQNFVFQGAMDLCYRVPQNQSR 351 (443)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~ai-lDTGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~ 351 (443)
+++.+.. ..+..+| |||||++++||.+++++|.+++.+... ..... +..+|+..
T Consensus 221 ~~~~~~~---------~~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~-----~~~g~-----~~~~C~~~------ 275 (361)
T 1mpp_A 221 DGSDAVS---------FDGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDAT-----ESQQG-----YTVPCSKY------ 275 (361)
T ss_dssp TTEEEEE---------EEEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCE-----EETTE-----EEEEHHHH------
T ss_pred CCeeecc---------CCCCEEEEECCCCCceeCCHHHHHHHHHHhCCccc-----CCCCc-----EEEECCCc------
Confidence 9987631 2235799 999999999999999998777733211 01111 34578765
Q ss_pred CCCC-CeEEEEE--e-----CcEEEEcCCceeEecCCcccCCCceEEE-EEEcCCCCCCCceeecccceeeeEEEEeCCC
Q 043762 352 LPQL-PAVSLVF--R-----GAEMSVSGDRLLYRAPGEVRGIDSVYCF-TFGNSDLLGVEAYVIGHHHQQNVWMEFDLER 422 (443)
Q Consensus 352 ~~~~-p~i~~~f--~-----g~~~~i~~~~~i~~~~~~~~~~~~~~C~-~i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~ 422 (443)
..+ |+|+|+| + |.+|+|++++|+++. ..++..|+ +|+... .+.||||++|||++|+|||+++
T Consensus 276 -~~~~p~i~f~f~~g~~~~~g~~~~i~~~~y~~~~-----~~~~~~C~~~i~~~~---~~~~iLG~~fl~~~yvvfD~~~ 346 (361)
T 1mpp_A 276 -QDSKTTFSLVLQKSGSSSDTIDVSVPISKMLLPV-----DKSGETCMFIVLPDG---GNQFIVGNLFLRFFVNVYDFGK 346 (361)
T ss_dssp -TTCCCEEEEEEECTTCSSCEEEEEEEGGGGEEEC-----SSSSCEEEESEEEES---SSCCEEEHHHHTTEEEEEETTT
T ss_pred -ccCCCcEEEEEEcCCcCCCCeEEEECHHHhEEec-----CCCCCeeEEEEEeCC---CCCEEEChHHhccEEEEEECCC
Confidence 567 9999999 7 899999999999984 12345898 587652 2569999999999999999999
Q ss_pred CEEEEEcCCCCchh
Q 043762 423 SRIGMAQVRCDLAG 436 (443)
Q Consensus 423 ~riGfa~~~c~~~~ 436 (443)
+|||||+++|+..+
T Consensus 347 ~~igfa~~~~~~~~ 360 (361)
T 1mpp_A 347 NRIGFAPLASGYEN 360 (361)
T ss_dssp TEEEEEEBCTTTCC
T ss_pred CEEEEEEcccCCCC
Confidence 99999999998654
No 7
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=4.8e-57 Score=438.92 Aligned_cols=301 Identities=17% Similarity=0.264 Sum_probs=247.8
Q ss_pred CCCCCccceEEEEEEEeCCCCceEEEEEeCCCCeeEEeCCCC---CCCCCCCCCCCCCCCcCccCCCCcccCCCCCCCCC
Q 043762 59 NKLPFHHNVSLTVSLTVGTPPQNVSMVLDTGSELSWLHCNNT---RYSYPNAFDPNLSSSYKPVTCSSPTCVNRTRDFTI 135 (443)
Q Consensus 59 ~~l~~~~~~~y~~~i~vGtP~Q~~~l~lDTGSs~~wv~c~~c---~~~~~~~y~p~~Sst~~~~~c~~~~c~~~~~~~~~ 135 (443)
.+|.++.+..|+++|+||||+|+++|+|||||+++||+|..| .|..++.|+|++|+|++...
T Consensus 6 ~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~~~y~~~~SsT~~~~~--------------- 70 (323)
T 3cms_A 6 VPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKNHQRFDPRKSSTFQNLG--------------- 70 (323)
T ss_dssp EEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEE---------------
T ss_pred eeeEeccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCCcccccCCCCCCCccCCCeEECC---------------
Confidence 456677788899999999999999999999999999999998 57788999999999998754
Q ss_pred CCCCCCCCCCceEEecCCCCceeeeEEEEEEEeCCccccceEEeEeeccccCCCCCCCCccccccccCCCcch-------
Q 043762 136 PVSCDNNSLCHATLSYADASSSEGNLASDQFFIGSSEISGLVFGCMDSVFSSSSDEDGKNTGLMGMNRGSLSF------- 208 (443)
Q Consensus 136 ~~~c~~~~~c~~~i~Y~~g~~~~G~~~~D~v~i~~~~~~~~~fg~a~~~~~~~~~~~~~~~GIlGLg~~~~s~------- 208 (443)
|.|.+.|++| ++.|.+++|+|++++.+++++.|||++.+.+. .+.....+||||||++..+.
T Consensus 71 ---------~~~~i~Yg~G-s~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~-~~~~~~~~GilGLg~~~~s~~~~~~~~ 139 (323)
T 3cms_A 71 ---------KPLSIHYGTG-SMQGILGYDTVTVSNIVDIQQTVGLSTQEPGD-FFTYAEFDGILGMAYPSLASEYSIPVF 139 (323)
T ss_dssp ---------EEEEEEETTE-EEEEEEEEEEEEETTEEEEEEEEEEEEECCSH-HHHHSSCSEEEECSCGGGSCTTCCCHH
T ss_pred ---------cEEEEEeCCC-CeEEEEEEEEEEECCeEEeccEEEEEEecccc-cccccCCceEEecCcchhhccCCCCHH
Confidence 5699999999 58999999999999999999999999975431 12234689999999987652
Q ss_pred ---hhh--cccCeEEEEecCCCCceeEEeCCCCCC-CCCCceeeeecccCCCCCCCCCeeEEEEEceEEecCeecCCCCC
Q 043762 209 ---VSQ--MGFPKFSYCISGADFSGLLLLGDADLP-WLLPLNYTPLIQMTTPLPYFDRVAYTVQLEGIKVLDKLLPIPRS 282 (443)
Q Consensus 209 ---~~q--l~~~~Fs~~L~~~~~~G~l~fGg~d~~-~~g~l~~~p~~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~ 282 (443)
.+| +..++||+||++.+..|.|+|||+|++ |.|++.|+|+... .+|.|.+++|+|+++.+..
T Consensus 140 ~~l~~q~~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---------~~~~v~l~~i~v~~~~~~~--- 207 (323)
T 3cms_A 140 DNMMNRHLVAQDLFSVYMDRNGQESMLTLGAIDPSYYTGSLHWVPVTVQ---------QYWQFTVDSVTISGVVVAC--- 207 (323)
T ss_dssp HHHHHTTCSSSSEEEEECCTTSSCEEEEESCCCGGGEEEEEEEEECSSB---------TTBEEEEEEEEETTEEEES---
T ss_pred HHHHHCCCCCCCEEEEEECCCCCCEEEEECCCChhhccCceEEEECccC---------CeEEEEEeeEEECCEEeec---
Confidence 344 456999999988655699999999965 9999999999865 6899999999999987642
Q ss_pred ccccCCCCCCcEEEcccCccccccHHHHHHHHHHHHHHhhhhhhhccCccccccCCcccceecCCCCCCCCCCCeEEEEE
Q 043762 283 VFVPDHTGAGQTMVDSGTQFTFLLGPAYAALRTEFLNQTASILKVLEDQNFVFQGAMDLCYRVPQNQSRLPQLPAVSLVF 362 (443)
Q Consensus 283 ~~~~~~~~~~~ailDTGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~p~i~~~f 362 (443)
..+..++|||||+++++|.+++++|.+++.+ .. . .... +..+|+.. +.+|+|+|+|
T Consensus 208 ------~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~----~~-~-~~g~-----~~~~C~~~-------~~~P~i~f~f 263 (323)
T 3cms_A 208 ------EGGCQAILDTGTSKLVGPSSDILNIQQAIGA----TQ-N-QYGE-----FDIDCDNL-------SYMPTVVFEI 263 (323)
T ss_dssp ------TTCEEEEECTTCCSEEECHHHHHHHHHHHTC----EE-E-TTTE-----EEECTTCT-------TTSCCEEEEE
T ss_pred ------CCCcEEEEecCCccEeCCHHHHHHHHHHhCC----ee-c-CCCc-----EEEECCCC-------ccCceEEEEE
Confidence 2346799999999999999999998777621 11 0 1111 23456543 6899999999
Q ss_pred eCcEEEEcCCceeEecCCcccCCCceEEEE-EEcCCCCCCCceeecccceeeeEEEEeCCCCEEEEEcCC
Q 043762 363 RGAEMSVSGDRLLYRAPGEVRGIDSVYCFT-FGNSDLLGVEAYVIGHHHQQNVWMEFDLERSRIGMAQVR 431 (443)
Q Consensus 363 ~g~~~~i~~~~~i~~~~~~~~~~~~~~C~~-i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfa~~~ 431 (443)
+|.+++|++++|+++ .+..|+. |+..+ ..+.||||++|||++|+|||++++|||||+++
T Consensus 264 ~g~~~~i~~~~y~~~--------~~~~C~~~i~~~~--~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 264 NGKMYPLTPSAYTSQ--------DQGFCTSGFQSEN--HSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp TTEEEEECHHHHEEE--------ETTEEEESEEEC-----CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCEEEEECHHHhccC--------CCCEEEEEEEeCC--CCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 999999999999986 2447985 87764 22569999999999999999999999999975
No 8
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=7.3e-57 Score=437.36 Aligned_cols=302 Identities=19% Similarity=0.301 Sum_probs=245.8
Q ss_pred CCCCCCccceEEEEEEEeCCCCceEEEEEeCCCCeeEEeCCCC---CCCCCCCCCCCCCCCcCccCCCCcccCCCCCCCC
Q 043762 58 PNKLPFHHNVSLTVSLTVGTPPQNVSMVLDTGSELSWLHCNNT---RYSYPNAFDPNLSSSYKPVTCSSPTCVNRTRDFT 134 (443)
Q Consensus 58 ~~~l~~~~~~~y~~~i~vGtP~Q~~~l~lDTGSs~~wv~c~~c---~~~~~~~y~p~~Sst~~~~~c~~~~c~~~~~~~~ 134 (443)
..+|.++.+..|+++|+||||+|+++|+|||||+++||+|..| .|..++.|+|++|+|++...
T Consensus 2 ~~~l~n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~~~y~~~~SsT~~~~~-------------- 67 (320)
T 4aa9_A 2 REPLTSYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVCKNHHRFDPRKSSTFRNLG-------------- 67 (320)
T ss_dssp ------CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEE--------------
T ss_pred CccceeccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCCccccCCCCCCCCCCCcCeEcCC--------------
Confidence 3578888899999999999999999999999999999999988 57788999999999998864
Q ss_pred CCCCCCCCCCCceEEecCCCCceeeeEEEEEEEeCCccccceEEeEeeccccCCCCCCCCccccccccCCCcc------h
Q 043762 135 IPVSCDNNSLCHATLSYADASSSEGNLASDQFFIGSSEISGLVFGCMDSVFSSSSDEDGKNTGLMGMNRGSLS------F 208 (443)
Q Consensus 135 ~~~~c~~~~~c~~~i~Y~~g~~~~G~~~~D~v~i~~~~~~~~~fg~a~~~~~~~~~~~~~~~GIlGLg~~~~s------~ 208 (443)
|.|.+.|++| ++.|.+++|+|++++.+++++.|||++..... .+.....+||||||++..+ +
T Consensus 68 ----------~~~~i~Yg~g-s~~G~~~~D~v~ig~~~v~~~~fg~~~~~~~~-~~~~~~~~GilGLg~~~~s~~~~~~~ 135 (320)
T 4aa9_A 68 ----------KPLSIHYGTG-SMEGFLGYDTVTVSNIVDPNQTVGLSTEQPGE-VFTYSEFDGILGLAYPSLASEYSVPV 135 (320)
T ss_dssp ----------EEEEEEETTE-EEEEEEEEEEEEETTEEEEEEEEEEEEECCSH-HHHSCCCSEEEECSCGGGSCTTCCCH
T ss_pred ----------cEEEEEECCc-EEEEEEEEEEEEECCEeecCeEEEEEEEcccc-cccccCcccEEecCcccccccCCCCH
Confidence 4699999999 58999999999999999999999999976431 1234568999999997654 2
Q ss_pred h----hh--cccCeEEEEecCCCCceeEEeCCCCCC-CCCCceeeeecccCCCCCCCCCeeEEEEEceEEecCeecCCCC
Q 043762 209 V----SQ--MGFPKFSYCISGADFSGLLLLGDADLP-WLLPLNYTPLIQMTTPLPYFDRVAYTVQLEGIKVLDKLLPIPR 281 (443)
Q Consensus 209 ~----~q--l~~~~Fs~~L~~~~~~G~l~fGg~d~~-~~g~l~~~p~~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~ 281 (443)
+ +| +.+++||+||.+....|.|+|||+|++ |.|++.|+|+... .+|.|.+++|+++++.+..
T Consensus 136 ~~~l~~~g~i~~~~Fs~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---------~~w~v~l~~i~v~~~~~~~-- 204 (320)
T 4aa9_A 136 FDNMMDRHLVARDLFSVYMDRNGQGSMLTLGAIDPSYYTGSLHWVPVTLQ---------QYWQFTVDSVTINGVAVAC-- 204 (320)
T ss_dssp HHHHHHTTCSSSSEEEEECCSSSSCCEEEETCCCGGGEEEEEEEEECSSB---------TTBEEEECEEEETTEEEES--
T ss_pred HHHHHhCCCCCCceEEEEeCCCCCCeEEEEcccCHHHccCceEEEEcccC---------CceEEEEeEEEECCEEecc--
Confidence 3 33 445899999997657899999999975 9999999999764 6899999999999988753
Q ss_pred CccccCCCCCCcEEEcccCccccccHHHHHHHHHHHHHHhhhhhhhccCccccccCCcccceecCCCCCCCCCCCeEEEE
Q 043762 282 SVFVPDHTGAGQTMVDSGTQFTFLLGPAYAALRTEFLNQTASILKVLEDQNFVFQGAMDLCYRVPQNQSRLPQLPAVSLV 361 (443)
Q Consensus 282 ~~~~~~~~~~~~ailDTGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~p~i~~~ 361 (443)
..+..++|||||+++++|.+++++|.+++ .... . ... .+..+|... ..+|+|+|+
T Consensus 205 -------~~~~~~iiDsGtt~~~lP~~~~~~i~~~~----~~~~-~-~~g-----~~~~~C~~~-------~~~p~i~f~ 259 (320)
T 4aa9_A 205 -------VGGCQAILDTGTSVLFGPSSDILKIQMAI----GATE-N-RYG-----EFDVNCGNL-------RSMPTVVFE 259 (320)
T ss_dssp -------TTCEEEEECTTCSSEEEEHHHHHHHHHHT----TCEE-C-TTS-----CEEECGGGG-------GGCCCEEEE
T ss_pred -------CCCcEEEEECCCCcEECCHHHHHHHHHHh----CCcc-c-CCC-----cEEEeCCCC-------CcCceEEEE
Confidence 23457999999999999999999877665 2111 0 111 123455543 679999999
Q ss_pred EeCcEEEEcCCceeEecCCcccCCCceEEEE-EEcCCCCCCCceeecccceeeeEEEEeCCCCEEEEEcCC
Q 043762 362 FRGAEMSVSGDRLLYRAPGEVRGIDSVYCFT-FGNSDLLGVEAYVIGHHHQQNVWMEFDLERSRIGMAQVR 431 (443)
Q Consensus 362 f~g~~~~i~~~~~i~~~~~~~~~~~~~~C~~-i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfa~~~ 431 (443)
|+|.+++|++++|+.+ .+..|+. |+.... .+.||||++|||++|+|||++++|||||+++
T Consensus 260 f~g~~~~l~~~~y~~~--------~~~~C~~~i~~~~~--~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 260 INGRDYPLSPSAYTSK--------DQGFCTSGFQGDNN--SELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp ETTEEEEECHHHHEEE--------ETTEEEESEEEETT--CCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ECCEEEEECHHHhccC--------CCCeEEEEEEcCCC--CCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 9999999999999975 3458985 776432 2569999999999999999999999999985
No 9
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=4.4e-56 Score=432.41 Aligned_cols=301 Identities=21% Similarity=0.368 Sum_probs=249.4
Q ss_pred CCCCCccceEEEEEEEeCCCCceEEEEEeCCCCeeEEeCCCC---CCCCCCCCCCCCCCCcCccCCCCcccCCCCCCCCC
Q 043762 59 NKLPFHHNVSLTVSLTVGTPPQNVSMVLDTGSELSWLHCNNT---RYSYPNAFDPNLSSSYKPVTCSSPTCVNRTRDFTI 135 (443)
Q Consensus 59 ~~l~~~~~~~y~~~i~vGtP~Q~~~l~lDTGSs~~wv~c~~c---~~~~~~~y~p~~Sst~~~~~c~~~~c~~~~~~~~~ 135 (443)
.+|.++.+..|+++|+||||+|+++|+|||||+++||+|..| .|..++.|+|++|+|++...
T Consensus 4 ~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~~~y~~~~SsT~~~~~--------------- 68 (324)
T 1am5_A 4 EQMKNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACSNHNKFKPRQSSTYVETG--------------- 68 (324)
T ss_dssp EEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHHHTSCCBCGGGCTTCEEEE---------------
T ss_pred eeeecCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccccCCCcCCCccCCCeEeCC---------------
Confidence 345566678899999999999999999999999999999998 47788999999999998754
Q ss_pred CCCCCCCCCCceEEecCCCCceeeeEEEEEEEeCCccccceEEeEeeccccCCCCCCCCccccccccCCCcch-------
Q 043762 136 PVSCDNNSLCHATLSYADASSSEGNLASDQFFIGSSEISGLVFGCMDSVFSSSSDEDGKNTGLMGMNRGSLSF------- 208 (443)
Q Consensus 136 ~~~c~~~~~c~~~i~Y~~g~~~~G~~~~D~v~i~~~~~~~~~fg~a~~~~~~~~~~~~~~~GIlGLg~~~~s~------- 208 (443)
|.|.+.|++| ++.|.+++|+|++++.+++++.|||++.+.+. .+.....+||||||++..+.
T Consensus 69 ---------~~~~i~Yg~G-s~~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~-~~~~~~~~GilGLg~~~~s~~~~~~~~ 137 (324)
T 1am5_A 69 ---------KTVDLTYGTG-GMRGILGQDTVSVGGGSDPNQELGESQTEPGP-FQAAAPFDGILGLAYPSIAAAGAVPVF 137 (324)
T ss_dssp ---------EEEEEECSSC-EEEEEEEEEEEESSSSCEEEEEEEEEEECCST-TTTTCSSSEEEECSCGGGCGGGCCCHH
T ss_pred ---------cEEEEEECCC-CeEEEEEECceeECCcEEcccEEEEEEecccc-cccCCCCceEEecCCccccccCCCchH
Confidence 5699999999 56999999999999999999999999986542 34456789999999987653
Q ss_pred ---hhh--cccCeEEEEecCCC-CceeEEeCCCCCC-CCCCceeeeecccCCCCCCCCCeeEEEEEceEEecCeecCCCC
Q 043762 209 ---VSQ--MGFPKFSYCISGAD-FSGLLLLGDADLP-WLLPLNYTPLIQMTTPLPYFDRVAYTVQLEGIKVLDKLLPIPR 281 (443)
Q Consensus 209 ---~~q--l~~~~Fs~~L~~~~-~~G~l~fGg~d~~-~~g~l~~~p~~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~ 281 (443)
.+| +..++||+||++.+ ..|.|+|||+|++ |.|++.|+|+... .+|.|.+++|+|+++.+..
T Consensus 138 ~~l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---------~~~~v~l~~i~v~~~~~~~-- 206 (324)
T 1am5_A 138 DNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVTAE---------KYWQVALDGITVNGQTAAC-- 206 (324)
T ss_dssp HHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEEEE---------TTEEEEECEEEETTEECCC--
T ss_pred HhHHhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecCCC---------cEEEEEEeEEEECCceeec--
Confidence 233 44599999998753 5899999999965 9999999999875 6899999999999987531
Q ss_pred CccccCCCCCCcEEEcccCccccccHHHHHHHHHHHHHHhhhhhhhccCccccccCCcccceecCCCCCCCCCCCeEEEE
Q 043762 282 SVFVPDHTGAGQTMVDSGTQFTFLLGPAYAALRTEFLNQTASILKVLEDQNFVFQGAMDLCYRVPQNQSRLPQLPAVSLV 361 (443)
Q Consensus 282 ~~~~~~~~~~~~ailDTGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~p~i~~~ 361 (443)
.+ ..++|||||+++++|++++++|.+++.+. ..... +..+|+.. +.+|+|+|+
T Consensus 207 -------~~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~-------~~~g~-----~~~~C~~~-------~~~P~i~f~ 259 (324)
T 1am5_A 207 -------EG-CQAIVDTGTSKIVAPVSALANIMKDIGAS-------ENQGE-----MMGNCASV-------QSLPDITFT 259 (324)
T ss_dssp -------CC-EEEEECTTCSSEEECTTTHHHHHHHHTCE-------ECCCC-----EECCTTSS-------SSSCCEEEE
T ss_pred -------cC-ceEEEecCCccEECCHHHHHHHHHHhCCc-------ccCCc-----EEEeCCCc-------ccCCcEEEE
Confidence 22 67999999999999999999987766221 11111 23456543 689999999
Q ss_pred EeCcEEEEcCCceeEecCCcccCCCceEEE-EEEcCCC--CCCCceeecccceeeeEEEEeCCCCEEEEEcCC
Q 043762 362 FRGAEMSVSGDRLLYRAPGEVRGIDSVYCF-TFGNSDL--LGVEAYVIGHHHQQNVWMEFDLERSRIGMAQVR 431 (443)
Q Consensus 362 f~g~~~~i~~~~~i~~~~~~~~~~~~~~C~-~i~~~~~--~~~~~~iLG~~fl~~~y~vfD~~~~riGfa~~~ 431 (443)
|+|.+++|++++|+.+. +..|+ +|+..+. ...+.||||++|||++|+|||++++|||||+++
T Consensus 260 f~g~~~~i~~~~y~~~~--------~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 260 INGVKQPLPPSAYIEGD--------QAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp ETTEEEEECHHHHEEES--------SSCEEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred ECCEEEEECHHHhcccC--------CCeEEEEEEECccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 99999999999999872 45798 5776542 123579999999999999999999999999975
No 10
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=2e-56 Score=435.81 Aligned_cols=302 Identities=22% Similarity=0.332 Sum_probs=248.3
Q ss_pred CCCCCccceEEEEEEEeCCCCceEEEEEeCCCCeeEEeCCCC---CCCCCCCCCCCCCCCcCccCCCCcccCCCCCCCCC
Q 043762 59 NKLPFHHNVSLTVSLTVGTPPQNVSMVLDTGSELSWLHCNNT---RYSYPNAFDPNLSSSYKPVTCSSPTCVNRTRDFTI 135 (443)
Q Consensus 59 ~~l~~~~~~~y~~~i~vGtP~Q~~~l~lDTGSs~~wv~c~~c---~~~~~~~y~p~~Sst~~~~~c~~~~c~~~~~~~~~ 135 (443)
++|.++.+..|+++|+||||+|+++|+|||||+++||+|..| .|..++.|||++|+|++...
T Consensus 5 ~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~~--------------- 69 (329)
T 1dpj_A 5 VPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLHSKYDHEASSSYKANG--------------- 69 (329)
T ss_dssp EECEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEE---------------
T ss_pred eeeeecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCcccCCcCcCCcccCcCeEECC---------------
Confidence 456666778899999999999999999999999999999998 37778999999999998743
Q ss_pred CCCCCCCCCCceEEecCCCCceeeeEEEEEEEeCCccccceEEeEeeccccCCCCCCCCccccccccCCCcch-------
Q 043762 136 PVSCDNNSLCHATLSYADASSSEGNLASDQFFIGSSEISGLVFGCMDSVFSSSSDEDGKNTGLMGMNRGSLSF------- 208 (443)
Q Consensus 136 ~~~c~~~~~c~~~i~Y~~g~~~~G~~~~D~v~i~~~~~~~~~fg~a~~~~~~~~~~~~~~~GIlGLg~~~~s~------- 208 (443)
|.|.+.|++| ++.|.+++|+|++++.+++++.|||++.+.+. .+.....+||||||++..++
T Consensus 70 ---------~~~~i~Yg~G-s~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~-~f~~~~~~GilGLg~~~~s~~~~~~~~ 138 (329)
T 1dpj_A 70 ---------TEFAIQYGTG-SLEGYISQDTLSIGDLTIPKQDFAEATSEPGL-TFAFGKFDGILGLGYDTISVDKVVPPF 138 (329)
T ss_dssp ---------EEEEEEETTE-EEEEEEEEEEEEETTEEEEEEEEEEEEECCHH-HHTTCSCSEEEECSCGGGCGGGCCCHH
T ss_pred ---------cEEEEEECCc-eEEEEEEEEEEEECCeEECCeEEEEEEecCcc-ccccCCcceEEEeCCchhhccCCCCHH
Confidence 5699999999 79999999999999999999999999875431 12345789999999987753
Q ss_pred ---hhh--cccCeEEEEecCCC----CceeEEeCCCCCC-CCCCceeeeecccCCCCCCCCCeeEEEEEceEEecCeecC
Q 043762 209 ---VSQ--MGFPKFSYCISGAD----FSGLLLLGDADLP-WLLPLNYTPLIQMTTPLPYFDRVAYTVQLEGIKVLDKLLP 278 (443)
Q Consensus 209 ---~~q--l~~~~Fs~~L~~~~----~~G~l~fGg~d~~-~~g~l~~~p~~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~ 278 (443)
.+| +..++||+||++.. ..|.|+|||+|++ |.|++.|+|+... .+|.|.+++|+|+++.+.
T Consensus 139 ~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---------~~~~v~l~~i~v~~~~~~ 209 (329)
T 1dpj_A 139 YNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRRK---------AYWEVKFEGIGLGDEYAE 209 (329)
T ss_dssp HHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECSSB---------TTBEEEEEEEEETTEEEE
T ss_pred HHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcCCC---------ceEEEEeeeEEECCeEec
Confidence 334 55699999997642 4799999999975 9999999999864 689999999999998764
Q ss_pred CCCCccccCCCCCCcEEEcccCccccccHHHHHHHHHHHHHHhhhhhhhccCccccccCCcccceecCCCCCCCCCCCeE
Q 043762 279 IPRSVFVPDHTGAGQTMVDSGTQFTFLLGPAYAALRTEFLNQTASILKVLEDQNFVFQGAMDLCYRVPQNQSRLPQLPAV 358 (443)
Q Consensus 279 ~~~~~~~~~~~~~~~ailDTGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~p~i 358 (443)
..+..++|||||+++++|.+++++|.+++.+. .. ...||.++|.. ...+|+|
T Consensus 210 ----------~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~--------~~--------~~g~~~~~C~~--~~~~P~i 261 (329)
T 1dpj_A 210 ----------LESHGAAIDTGTSLITLPSGLAEMINAEIGAK--------KG--------WTGQYTLDCNT--RDNLPDL 261 (329)
T ss_dssp ----------CSSCEEEECTTCSCEEECHHHHHHHHHHHTCE--------EC--------TTSSEEECGGG--GGGCCCE
T ss_pred ----------CCCccEEeeCCCCcEECCHHHHHHHHHHhCCc--------cC--------CCCeEEEECCC--CCcCCcE
Confidence 23457999999999999999999987776211 11 11245555542 2679999
Q ss_pred EEEEeCcEEEEcCCceeEecCCcccCCCceEEE-EEEcCCC--CCCCceeecccceeeeEEEEeCCCCEEEEEcCC
Q 043762 359 SLVFRGAEMSVSGDRLLYRAPGEVRGIDSVYCF-TFGNSDL--LGVEAYVIGHHHQQNVWMEFDLERSRIGMAQVR 431 (443)
Q Consensus 359 ~~~f~g~~~~i~~~~~i~~~~~~~~~~~~~~C~-~i~~~~~--~~~~~~iLG~~fl~~~y~vfD~~~~riGfa~~~ 431 (443)
+|+|+|.+++|++++|+.+. . ..|+ +|+..+. ...+.||||++|||++|+|||++++|||||+++
T Consensus 262 ~f~f~g~~~~i~~~~y~~~~-------~-~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 262 IFNFNGYNFTIGPYDYTLEV-------S-GSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp EEEETTEEEEECTTTSEEEE-------T-TEEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEECCEEEEECHHHhEecC-------C-CEEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 99999999999999999974 2 4798 4776531 123579999999999999999999999999975
No 11
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=1.6e-55 Score=429.37 Aligned_cols=304 Identities=21% Similarity=0.341 Sum_probs=249.8
Q ss_pred CCCCCCccceEEEEEEEeCCCCceEEEEEeCCCCeeEEeCCCC---CCCCCCCCCCCCCCCcCccCCCCcccCCCCCCCC
Q 043762 58 PNKLPFHHNVSLTVSLTVGTPPQNVSMVLDTGSELSWLHCNNT---RYSYPNAFDPNLSSSYKPVTCSSPTCVNRTRDFT 134 (443)
Q Consensus 58 ~~~l~~~~~~~y~~~i~vGtP~Q~~~l~lDTGSs~~wv~c~~c---~~~~~~~y~p~~Sst~~~~~c~~~~c~~~~~~~~ 134 (443)
..+|. +.+..|+++|+||||+|+++|+|||||+++||+|..| .|..++.|||++|+|++...
T Consensus 4 ~~~l~-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~~-------------- 68 (329)
T 1htr_B 4 YEPMA-YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTSHSRFNPSESSTYSTNG-------------- 68 (329)
T ss_dssp CCGGG-GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEE--------------
T ss_pred eeeeE-EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCcccCCCCcCCCccCCCeEECC--------------
Confidence 35677 7788899999999999999999999999999999999 47788999999999998754
Q ss_pred CCCCCCCCCCCceEEecCCCCceeeeEEEEEEEeCCccccceEEeEeeccccCCCCCCCCccccccccCCCcch------
Q 043762 135 IPVSCDNNSLCHATLSYADASSSEGNLASDQFFIGSSEISGLVFGCMDSVFSSSSDEDGKNTGLMGMNRGSLSF------ 208 (443)
Q Consensus 135 ~~~~c~~~~~c~~~i~Y~~g~~~~G~~~~D~v~i~~~~~~~~~fg~a~~~~~~~~~~~~~~~GIlGLg~~~~s~------ 208 (443)
|.|.+.|++| ++.|.+++|+|++++.+++++.|||++.+.+. .+.....+||||||++..+.
T Consensus 69 ----------~~~~i~Yg~g-s~~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~-~~~~~~~~GilGLg~~~~s~~~~~~~ 136 (329)
T 1htr_B 69 ----------QTFSLQYGSG-SLTGFFGYDTLTVQSIQVPNQEFGLSENEPGT-NFVYAQFDGIMGLAYPALSVDEATTA 136 (329)
T ss_dssp ----------EEEEEEETTE-EEEEEEEEEEEEETTEEEEEEEEEEESSCSSG-GGGGCSCCEEEECCCCSCCCTTCCSH
T ss_pred ----------cEEEEEeCCC-CeEEEEEeeeEEEcceEECceEEEEEEEcccc-ccccCCCceEEecCCCcccccCCCCH
Confidence 5699999999 56999999999999999999999999976431 23345789999999987653
Q ss_pred ----hhh--cccCeEEEEecCCC-C-ceeEEeCCCCCC-CCCCceeeeecccCCCCCCCCCeeEEEEEceEEecCeecCC
Q 043762 209 ----VSQ--MGFPKFSYCISGAD-F-SGLLLLGDADLP-WLLPLNYTPLIQMTTPLPYFDRVAYTVQLEGIKVLDKLLPI 279 (443)
Q Consensus 209 ----~~q--l~~~~Fs~~L~~~~-~-~G~l~fGg~d~~-~~g~l~~~p~~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~ 279 (443)
.+| +..++||+||++.+ . .|.|+|||+|++ |.|++.|+|+... .+|.|.+++|+|+++.+..
T Consensus 137 ~~~l~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---------~~~~v~l~~i~v~~~~~~~ 207 (329)
T 1htr_B 137 MQGMVQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVTQE---------LYWQIGIEEFLIGGQASGW 207 (329)
T ss_dssp HHHHHHTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBCSS---------SSCEEEECEEEETTEECCT
T ss_pred HHHHHhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECCCC---------ceEEEEEeEEEECCceeee
Confidence 233 44599999998764 2 899999999965 9999999999864 6899999999999987531
Q ss_pred CCCccccCCCCCCcEEEcccCccccccHHHHHHHHHHHHHHhhhhhhhccCccccccCCcccceecCCCCCCCCCCCeEE
Q 043762 280 PRSVFVPDHTGAGQTMVDSGTQFTFLLGPAYAALRTEFLNQTASILKVLEDQNFVFQGAMDLCYRVPQNQSRLPQLPAVS 359 (443)
Q Consensus 280 ~~~~~~~~~~~~~~ailDTGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~p~i~ 359 (443)
...+..++|||||+++++|++++++|.+++.+. . . .... +..+|+.. ..+|+|+
T Consensus 208 --------~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~----~-~-~~g~-----~~~~C~~~-------~~~P~i~ 261 (329)
T 1htr_B 208 --------CSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQ----E-D-EYGQ-----FLVNCNSI-------QNLPSLT 261 (329)
T ss_dssp --------TTTCEEEEECTTCCSEEEEGGGHHHHHHHHTCE----E-C-TTSC-----EEECGGGG-------GGSCCEE
T ss_pred --------cCCCceEEEecCCccEECCHHHHHHHHHHhCCe----e-c-CCCe-----EEEeCCCc-------ccCCcEE
Confidence 134567999999999999999999987776221 1 0 1111 24567654 6799999
Q ss_pred EEEeCcEEEEcCCceeEecCCcccCCCceEEE-EEEcCCC--CCCC-ceeecccceeeeEEEEeCCCCEEEEEcCC
Q 043762 360 LVFRGAEMSVSGDRLLYRAPGEVRGIDSVYCF-TFGNSDL--LGVE-AYVIGHHHQQNVWMEFDLERSRIGMAQVR 431 (443)
Q Consensus 360 ~~f~g~~~~i~~~~~i~~~~~~~~~~~~~~C~-~i~~~~~--~~~~-~~iLG~~fl~~~y~vfD~~~~riGfa~~~ 431 (443)
|+|+|.+++|++++|+.+. . + .|+ +|+..+. ...+ .||||++|||++|+|||++++|||||+++
T Consensus 262 f~f~g~~~~i~~~~y~~~~------~-g-~C~~~~~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 262 FIINGVEFPLPPSSYILSN------N-G-YCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp EEETTEEEEECHHHHEEEC------S-S-CEEESEEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEECCEEEEECHHHhcccC------C-C-EEEEEEEECCCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 9999999999999999984 2 3 898 4776432 1224 79999999999999999999999999975
No 12
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=5.3e-55 Score=425.43 Aligned_cols=300 Identities=23% Similarity=0.298 Sum_probs=241.4
Q ss_pred ccceEEEEEEEeCCCCceEEEEEeCCCCeeEEeCCCC---CCCCCCCCCCCCCCCcCccCCCCcccCCCCCCCCCCCCCC
Q 043762 64 HHNVSLTVSLTVGTPPQNVSMVLDTGSELSWLHCNNT---RYSYPNAFDPNLSSSYKPVTCSSPTCVNRTRDFTIPVSCD 140 (443)
Q Consensus 64 ~~~~~y~~~i~vGtP~Q~~~l~lDTGSs~~wv~c~~c---~~~~~~~y~p~~Sst~~~~~c~~~~c~~~~~~~~~~~~c~ 140 (443)
..+..|+++|+||||+|+++|+|||||+++||+|..| .|..++.|+|++|+|++.+.
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~~~~~y~~~~SsT~~~~~-------------------- 71 (329)
T 3c9x_A 12 SADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPKSSATGHAIYTPSKSSTSKKVS-------------------- 71 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCHHHHTTSCCBCGGGCTTCEECT--------------------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCCccccCCCCcCCcccCcCceEcC--------------------
Confidence 3466799999999999999999999999999999888 56778999999999998753
Q ss_pred CCCCCceEEecCCCCceeeeEEEEEEEeCCccccceEEeEeeccccCCCCCCCCccccccccCCCcch------------
Q 043762 141 NNSLCHATLSYADASSSEGNLASDQFFIGSSEISGLVFGCMDSVFSSSSDEDGKNTGLMGMNRGSLSF------------ 208 (443)
Q Consensus 141 ~~~~c~~~i~Y~~g~~~~G~~~~D~v~i~~~~~~~~~fg~a~~~~~~~~~~~~~~~GIlGLg~~~~s~------------ 208 (443)
.|.|.+.|++|+.+.|.+++|+|++++.+++++.|||++.+.+. .......+||||||++..+.
T Consensus 72 ---~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~~~-~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~ 147 (329)
T 3c9x_A 72 ---GASWSISYGDGSSSSGDVYTDKVTIGGFSVNTQGVESATRVSTE-FVQDTVISGLVGLAFDSGNQVRPHPQKTWFSN 147 (329)
T ss_dssp ---TCBEEEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHH-HHHCTTCCEEEECSCGGGCCCBSSCCCCHHHH
T ss_pred ---CCeEEEEeCCCCcEEEEEEEEEEEECCEEEcceEEEEEEecCcc-ccccCCCceeEEeCcccccccCCCCCCCHHHH
Confidence 25699999999779999999999999999999999999976431 11124789999999976653
Q ss_pred -hhhcccCeEEEEecCCCCceeEEeCCCCCC-CCCCceeeeecccCCCCCCCCCeeEEEEEceEEecCeecCCCCCcccc
Q 043762 209 -VSQMGFPKFSYCISGADFSGLLLLGDADLP-WLLPLNYTPLIQMTTPLPYFDRVAYTVQLEGIKVLDKLLPIPRSVFVP 286 (443)
Q Consensus 209 -~~ql~~~~Fs~~L~~~~~~G~l~fGg~d~~-~~g~l~~~p~~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~ 286 (443)
.+|+..++||+||.+ +..|.|+|||+|++ |.|++.|+|+... ..+|.|.+++|+|+++.+.
T Consensus 148 l~~~i~~~~FS~~l~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~--------~~~~~v~l~~i~v~~~~~~-------- 210 (329)
T 3c9x_A 148 AASSLAEPLFTADLRH-GQNGSYNFGYIDTSVAKGPVAYTPVDNS--------QGFWEFTASGYSVGGGKLN-------- 210 (329)
T ss_dssp HHTTSSSSEEEEECCS-SSCEEEEESSCCGGGCSSCEEEEECBCT--------TSSCEEEECCEEETTCCCC--------
T ss_pred HHHhcCCCEEEEEecC-CCCcEEEEeCcChhhcccceEEEEccCC--------CceEEEEEeeEEECCEecc--------
Confidence 235567999999986 36899999999965 9999999999743 2689999999999998653
Q ss_pred CCCCCCcEEEcccCccccccHHHHHHHHHHHHHHhhhhhhhccCccccccCCcccceecCCCCCCCCCCCeEEEEEeCcE
Q 043762 287 DHTGAGQTMVDSGTQFTFLLGPAYAALRTEFLNQTASILKVLEDQNFVFQGAMDLCYRVPQNQSRLPQLPAVSLVFRGAE 366 (443)
Q Consensus 287 ~~~~~~~ailDTGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~p~i~~~f~g~~ 366 (443)
..+..++|||||++++||.+++++|.+++ .+........ -|.++|. ..+|+|+|+|+|.+
T Consensus 211 --~~~~~aiiDSGTt~~~lp~~~~~~i~~~i----~~a~~~~~~~----------~~~~~C~----~~~P~i~f~f~g~~ 270 (329)
T 3c9x_A 211 --RNSIDGIADTGTTLLLLDDNVVDAYYANV----QSAQYDNQQE----------GVVFDCD----EDLPSFSFGVGSST 270 (329)
T ss_dssp --SCCEEEEECTTCCSEEECHHHHHHHHTTC----TTCEEETTTT----------EEEEETT----CCCCCEEEEETTEE
T ss_pred --CCCceEEEECCCCcEeCCHHHHHHHHHhC----CCcEEcCCCC----------EEEEECC----CCCCcEEEEECCEE
Confidence 23457999999999999999998865544 2211110111 1333443 57899999999999
Q ss_pred EEEcCCceeEecCCcccCCCceEEEE-EEcCCCCCCCceeecccceeeeEEEEeCCCCEEEEEcC
Q 043762 367 MSVSGDRLLYRAPGEVRGIDSVYCFT-FGNSDLLGVEAYVIGHHHQQNVWMEFDLERSRIGMAQV 430 (443)
Q Consensus 367 ~~i~~~~~i~~~~~~~~~~~~~~C~~-i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfa~~ 430 (443)
+.||+++|+++. ...+...|++ |+... ..+.||||++|||++|+|||++++|||||+.
T Consensus 271 ~~ip~~~~~~~~----~~~~~~~C~~~i~~~~--~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 271 ITIPGDLLNLTP----LEEGSSTCFGGLQSSS--GIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp EEECGGGGEEEE----SSTTCSEEEESEEECT--TTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred EEECHHHeeeec----cCCCCCeEEEEEEcCC--CCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 999999999873 1123468987 77654 2356999999999999999999999999974
No 13
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=1.3e-55 Score=432.36 Aligned_cols=305 Identities=23% Similarity=0.347 Sum_probs=249.6
Q ss_pred CCCCCccceEEEEEEEeCCCCceEEEEEeCCCCeeEEeCCCCC-----CCCCCCCCCCCCCCcCccCCCCcccCCCCCCC
Q 043762 59 NKLPFHHNVSLTVSLTVGTPPQNVSMVLDTGSELSWLHCNNTR-----YSYPNAFDPNLSSSYKPVTCSSPTCVNRTRDF 133 (443)
Q Consensus 59 ~~l~~~~~~~y~~~i~vGtP~Q~~~l~lDTGSs~~wv~c~~c~-----~~~~~~y~p~~Sst~~~~~c~~~~c~~~~~~~ 133 (443)
++|.++.+..|+++|+||||+|+++|+|||||+++||+|..|. |..++.|+|++|+|++...
T Consensus 10 ~~l~n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~~~~~y~~~~SsT~~~~~------------- 76 (341)
T 3k1w_A 10 VILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNG------------- 76 (341)
T ss_dssp EEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHHTSCCBCGGGCTTCEEEE-------------
T ss_pred ccceEccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcccCCCCCCCCcCcCeeECC-------------
Confidence 4566667888999999999999999999999999999998883 6678999999999998743
Q ss_pred CCCCCCCCCCCCceEEecCCCCceeeeEEEEEEEeCCccccceEEeEeeccccCCCCCCCCccccccccCCCcc------
Q 043762 134 TIPVSCDNNSLCHATLSYADASSSEGNLASDQFFIGSSEISGLVFGCMDSVFSSSSDEDGKNTGLMGMNRGSLS------ 207 (443)
Q Consensus 134 ~~~~~c~~~~~c~~~i~Y~~g~~~~G~~~~D~v~i~~~~~~~~~fg~a~~~~~~~~~~~~~~~GIlGLg~~~~s------ 207 (443)
|.|.+.|++| ++.|.+++|+|++++.++ ++.|||++..... .+.....+||||||++..+
T Consensus 77 -----------~~~~i~Yg~g-s~~G~~~~D~v~ig~~~v-~~~fg~~~~~~~~-~~~~~~~~GilGLg~~~~s~~~~~~ 142 (341)
T 3k1w_A 77 -----------TELTLRYSTG-TVSGFLSQDIITVGGITV-TQMFGEVTEMPAL-PFMLAEFDGVVGMGFIEQAIGRVTP 142 (341)
T ss_dssp -----------EEEEEEETTE-EEEEEEEEEEEEETTEEE-EEEEEEEEECCHH-HHTTCSSSEEEECSCGGGCGGGCCC
T ss_pred -----------CEEEEEECCc-EEEEEEEEEEEEECCcee-eEEEEEEEEcccc-ccccCCcceEEECCchhhcccCCCC
Confidence 5699999999 499999999999999999 9999999986531 1345578999999998765
Q ss_pred ----hhhh--cccCeEEEEecCCC-----CceeEEeCCCCCC-CCCCceeeeecccCCCCCCCCCeeEEEEEceEEecCe
Q 043762 208 ----FVSQ--MGFPKFSYCISGAD-----FSGLLLLGDADLP-WLLPLNYTPLIQMTTPLPYFDRVAYTVQLEGIKVLDK 275 (443)
Q Consensus 208 ----~~~q--l~~~~Fs~~L~~~~-----~~G~l~fGg~d~~-~~g~l~~~p~~~~~~~~~~~~~~~w~v~l~~i~v~~~ 275 (443)
+.+| +..++||+||.+.. ..|.|+|||+|++ |.|+++|+|+... .+|.|.+++|+++++
T Consensus 143 ~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---------~~w~v~l~~i~v~~~ 213 (341)
T 3k1w_A 143 IFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKT---------GVWQIQMKGVSVGSS 213 (341)
T ss_dssp HHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECSST---------TSCEEEECCEEETTE
T ss_pred HHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecCCC---------CEEEEEEeEEEECCE
Confidence 3444 55699999998753 3899999999975 9999999999864 689999999999998
Q ss_pred ecCCCCCccccCCCCCCcEEEcccCccccccHHHHHHHHHHHHHHhhhhhhhccCccccccCCcccceecCCCCCCCCCC
Q 043762 276 LLPIPRSVFVPDHTGAGQTMVDSGTQFTFLLGPAYAALRTEFLNQTASILKVLEDQNFVFQGAMDLCYRVPQNQSRLPQL 355 (443)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~ailDTGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~ 355 (443)
.+. ...+..++|||||+++++|.+++++|.+++. ... .. .++..+|... ..+
T Consensus 214 ~~~---------~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~----~~~----~~----~g~~~~C~~~-------~~~ 265 (341)
T 3k1w_A 214 TLL---------CEDGCLALVDTGASYISGSTSSIEKLMEALG----AKK----RL----FDYVVKCNEG-------PTL 265 (341)
T ss_dssp EEE---------CTTCEEEEECTTCSSEEECHHHHHHHHHHHT----CEE----CS----SCEEEEGGGG-------GGC
T ss_pred Eee---------cCCCCEEEEECCCChhcCCHHHHHHHHHHcC----Cee----cC----CCeEEeCCCC-------CcC
Confidence 743 2345679999999999999999999877662 111 11 1124456543 678
Q ss_pred CeEEEEEeCcEEEEcCCceeEecCCcccCCCceEEEE-EEcCCC--CCCCceeecccceeeeEEEEeCCCCEEEEEcCC
Q 043762 356 PAVSLVFRGAEMSVSGDRLLYRAPGEVRGIDSVYCFT-FGNSDL--LGVEAYVIGHHHQQNVWMEFDLERSRIGMAQVR 431 (443)
Q Consensus 356 p~i~~~f~g~~~~i~~~~~i~~~~~~~~~~~~~~C~~-i~~~~~--~~~~~~iLG~~fl~~~y~vfD~~~~riGfa~~~ 431 (443)
|+|+|+|+|.+++|++++|+.+.. ...+..|+. |...+. ...+.||||++|||++|+|||++++|||||+++
T Consensus 266 p~i~f~f~g~~~~l~~~~~~~~~~----~~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 266 PDISFHLGGKEYTLTSADYVFQES----YSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp CCEEEEETTEEEEECHHHHBCCSC----CCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CcEEEEECCEEEEECHHHheeEcc----CCCCCeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 999999999999999999998741 123568985 776421 123579999999999999999999999999986
No 14
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=1.1e-54 Score=441.13 Aligned_cols=327 Identities=19% Similarity=0.294 Sum_probs=253.2
Q ss_pred CCCCCCCCccceEEEEEEEeCCCCceEEEEEeCCCCeeEEeCCCC----CCCCCCCCCCCCCCCcCccCCCCcccCCCCC
Q 043762 56 RSPNKLPFHHNVSLTVSLTVGTPPQNVSMVLDTGSELSWLHCNNT----RYSYPNAFDPNLSSSYKPVTCSSPTCVNRTR 131 (443)
Q Consensus 56 ~~~~~l~~~~~~~y~~~i~vGtP~Q~~~l~lDTGSs~~wv~c~~c----~~~~~~~y~p~~Sst~~~~~c~~~~c~~~~~ 131 (443)
...++|.++.+..|+++|+||||+|+++|+|||||+++||+|..| .|..++.|+|++|+|++..+
T Consensus 41 ~~~~~l~n~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~----------- 109 (478)
T 1qdm_A 41 GDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYLHSRYKAGASSTYKKNG----------- 109 (478)
T ss_dssp SCSGGGCCGGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGGGGSCCBCGGGCTTCBCCC-----------
T ss_pred CceEEeEeccCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCCCccccCCCCCCcccCCCeeeCC-----------
Confidence 345788998899999999999999999999999999999999988 47788999999999998743
Q ss_pred CCCCCCCCCCCCCCceEEecCCCCceeeeEEEEEEEeCCccccceEEeEeeccccCCCCCCCCccccccccCCCcch---
Q 043762 132 DFTIPVSCDNNSLCHATLSYADASSSEGNLASDQFFIGSSEISGLVFGCMDSVFSSSSDEDGKNTGLMGMNRGSLSF--- 208 (443)
Q Consensus 132 ~~~~~~~c~~~~~c~~~i~Y~~g~~~~G~~~~D~v~i~~~~~~~~~fg~a~~~~~~~~~~~~~~~GIlGLg~~~~s~--- 208 (443)
|.|.+.|++| ++.|.+++|+|++++.+++++.||+++.+.+. .+....++||||||++.++.
T Consensus 110 -------------~~~~i~Yg~G-s~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~-~f~~~~~dGIlGLg~~~~s~~~~ 174 (478)
T 1qdm_A 110 -------------KPAAIQYGTG-SIAGYFSEDSVTVGDLVVKDQEFIEATKEPGI-TFLVAKFDGILGLGFKEISVGKA 174 (478)
T ss_dssp -------------CEEEEEETTE-EEEEEEEEEEEEETTEEEEEEEEEEEEECCBS-HHHHCSSSEEEECSCGGGCGGGC
T ss_pred -------------cEEEEEcCCC-CeEEEEEEEEEEECCeEECCEEEEEEEecCCc-ccccccccceecccccccccCCC
Confidence 5699999999 58999999999999999999999999875431 22345689999999988763
Q ss_pred -------hhh--cccCeEEEEecCC---CCceeEEeCCCCCC-CCCCceeeeecccCCCCCCCCCeeEEEEEceEEecCe
Q 043762 209 -------VSQ--MGFPKFSYCISGA---DFSGLLLLGDADLP-WLLPLNYTPLIQMTTPLPYFDRVAYTVQLEGIKVLDK 275 (443)
Q Consensus 209 -------~~q--l~~~~Fs~~L~~~---~~~G~l~fGg~d~~-~~g~l~~~p~~~~~~~~~~~~~~~w~v~l~~i~v~~~ 275 (443)
++| +..++||+||++. ...|.|+|||+|+. |.|++.|+|+... .+|.|.+++|.|+++
T Consensus 175 ~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~---------~~w~v~l~~i~v~g~ 245 (478)
T 1qdm_A 175 VPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQK---------GYWQFDMGDVLVGGK 245 (478)
T ss_dssp CCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEE---------TTEEEEECCEEETTE
T ss_pred CcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCC---------CeEEEEEeEEEECCE
Confidence 344 4559999999875 25899999999975 9999999999865 689999999999998
Q ss_pred ecCCCCCccccCCCCCCcEEEcccCccccccHHHHHHHHHHHHHHh-----------------hhhh-hhc---------
Q 043762 276 LLPIPRSVFVPDHTGAGQTMVDSGTQFTFLLGPAYAALRTEFLNQT-----------------ASIL-KVL--------- 328 (443)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~ailDTGt~~~~lp~~~~~~l~~~~~~~~-----------------~~~~-~~~--------- 328 (443)
.+.+. ..+..+||||||+++++|.+++++|.+++.+.. -... ...
T Consensus 246 ~~~~~--------~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~i 317 (478)
T 1qdm_A 246 STGFC--------AGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQV 317 (478)
T ss_dssp ECSTT--------TTCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHT
T ss_pred EEeec--------CCCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhccc
Confidence 87542 345679999999999999999999888774210 0000 000
Q ss_pred ------c------------Cc------c----------------------------ccccCCcccc---------eecCC
Q 043762 329 ------E------------DQ------N----------------------------FVFQGAMDLC---------YRVPQ 347 (443)
Q Consensus 329 ------~------------~~------~----------------------------~~~~~~~~~C---------~~~~~ 347 (443)
. +. . .....-...| |.++|
T Consensus 318 glC~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~C 397 (478)
T 1qdm_A 318 GLCTFDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDC 397 (478)
T ss_dssp TCC---------------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEECG
T ss_pred cccccCccccccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEeec
Confidence 0 00 0 0000000112 22333
Q ss_pred CCCCCCCCCeEEEEEeCcEEEEcCCceeEecCCcccCCCceEEEE-EEcCCC--CCCCceeecccceeeeEEEEeCCCCE
Q 043762 348 NQSRLPQLPAVSLVFRGAEMSVSGDRLLYRAPGEVRGIDSVYCFT-FGNSDL--LGVEAYVIGHHHQQNVWMEFDLERSR 424 (443)
Q Consensus 348 ~~~~~~~~p~i~~~f~g~~~~i~~~~~i~~~~~~~~~~~~~~C~~-i~~~~~--~~~~~~iLG~~fl~~~y~vfD~~~~r 424 (443)
+. +..+|+|+|+|+|.+|+|+|++|+.+.. ......|++ |+..+. ...+.||||+.|||++|+|||++++|
T Consensus 398 ~~--~~~lP~i~f~~gg~~~~l~p~~yi~~~~----~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~r 471 (478)
T 1qdm_A 398 GS--LGSMPDIEFTIGGKKFALKPEEYILKVG----EGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLR 471 (478)
T ss_dssp GG--GTTCCCEEEEETTEEEEECHHHHEEECS----CGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTE
T ss_pred cc--ccccccEEEEECCEEEEEChHHhEEEcc----CCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCE
Confidence 21 2689999999999999999999999841 112457986 775432 12367999999999999999999999
Q ss_pred EEEEcCC
Q 043762 425 IGMAQVR 431 (443)
Q Consensus 425 iGfa~~~ 431 (443)
||||+++
T Consensus 472 IGfA~a~ 478 (478)
T 1qdm_A 472 IGFAKAA 478 (478)
T ss_dssp EEEEEEC
T ss_pred EEEEeCC
Confidence 9999864
No 15
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=7e-55 Score=423.90 Aligned_cols=293 Identities=23% Similarity=0.335 Sum_probs=239.8
Q ss_pred cceEEEEEEEeCCCCceEEEEEeCCCCeeEEeCCCC-C-CCCCCCCCCCCCCCcCccCCCCcccCCCCCCCCCCCCCCCC
Q 043762 65 HNVSLTVSLTVGTPPQNVSMVLDTGSELSWLHCNNT-R-YSYPNAFDPNLSSSYKPVTCSSPTCVNRTRDFTIPVSCDNN 142 (443)
Q Consensus 65 ~~~~y~~~i~vGtP~Q~~~l~lDTGSs~~wv~c~~c-~-~~~~~~y~p~~Sst~~~~~c~~~~c~~~~~~~~~~~~c~~~ 142 (443)
.+..|+++|+||||+|++.|+|||||+++||+|..| . |..++.|+|++|+|++...
T Consensus 13 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c~~~~~~y~~~~SsT~~~~~---------------------- 70 (325)
T 2apr_A 13 NDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNCGSGQTKYDPNQSSTYQADG---------------------- 70 (325)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSCCTTSCCBCGGGCTTCEEEE----------------------
T ss_pred CCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchHhcCCCCCCcccCCCeeeCC----------------------
Confidence 456799999999999999999999999999998887 3 5678899999999998743
Q ss_pred CCCceEEecCCCCceeeeEEEEEEEeCCccccceEEeEeeccccCCCCCCCCccccccccCCCcc-------hhh----h
Q 043762 143 SLCHATLSYADASSSEGNLASDQFFIGSSEISGLVFGCMDSVFSSSSDEDGKNTGLMGMNRGSLS-------FVS----Q 211 (443)
Q Consensus 143 ~~c~~~i~Y~~g~~~~G~~~~D~v~i~~~~~~~~~fg~a~~~~~~~~~~~~~~~GIlGLg~~~~s-------~~~----q 211 (443)
|.|.+.|++|+.+.|.+++|+|++++.+++++.|||++..... +.....+||||||++..+ +++ |
T Consensus 71 --~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~--f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~q 146 (325)
T 2apr_A 71 --RTWSISYGDGSSASGILAKDNVNLGGLLIKGQTIELAKREAAS--FASGPNDGLLGLGFDTITTVRGVKTPMDNLISQ 146 (325)
T ss_dssp --EEEEEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHH--HHTSSCSEEEECSCGGGCSSTTCCCHHHHHHHT
T ss_pred --CEEEEEECCCCCEEEEEEEEEEEECCEEECcEEEEEEeccCcc--cccCCCceEEEeCCcccccccCCCCHHHHHHhc
Confidence 5699999999779999999999999999999999999876532 223358999999998765 233 3
Q ss_pred --cccCeEEEEecCC--CCceeEEeCCCCCC-CCCCceeeeecccCCCCCCCCCeeEEEEEceEEecCeecCCCCCcccc
Q 043762 212 --MGFPKFSYCISGA--DFSGLLLLGDADLP-WLLPLNYTPLIQMTTPLPYFDRVAYTVQLEGIKVLDKLLPIPRSVFVP 286 (443)
Q Consensus 212 --l~~~~Fs~~L~~~--~~~G~l~fGg~d~~-~~g~l~~~p~~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~ 286 (443)
+..++||+||++. +..|.|+|||+|++ |.|++.|+|+... ..+|.|.+++|+|+++ +
T Consensus 147 g~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--------~~~~~v~l~~i~vg~~-~--------- 208 (325)
T 2apr_A 147 GLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNS--------RGWWGITVDRATVGTS-T--------- 208 (325)
T ss_dssp TSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCT--------TSSCEEEECEEEETTE-E---------
T ss_pred CCCCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccCC--------CCEEEEEEeEEEECCE-e---------
Confidence 5569999999653 46899999999965 9999999999753 2689999999999983 2
Q ss_pred CCCCCCcEEEcccCccccccHHHHHHHHHHHHHHhhhhhhhccCccccccCCcccceecCCCCCCCCCCCeEEEEEeCcE
Q 043762 287 DHTGAGQTMVDSGTQFTFLLGPAYAALRTEFLNQTASILKVLEDQNFVFQGAMDLCYRVPQNQSRLPQLPAVSLVFRGAE 366 (443)
Q Consensus 287 ~~~~~~~ailDTGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~p~i~~~f~g~~ 366 (443)
...+..++|||||++++||+++|+++++++.+++.+. .. +..+|+. ..+|+|+|+|+|.+
T Consensus 209 -~~~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~~~------g~-----~~~~C~~--------~~~p~i~f~f~g~~ 268 (325)
T 2apr_A 209 -VASSFDGILDTGTTLLILPNNIAASVARAYGASDNGD------GT-----YTISCDT--------SAFKPLVFSINGAS 268 (325)
T ss_dssp -EECCEEEEECTTCSSEEEEHHHHHHHHHHHTCEECSS------SC-----EEECSCG--------GGCCCEEEEETTEE
T ss_pred -cCCCceEEEecCCccEECCHHHHHHHHHHHhcccCCC------Ce-----EEEECCC--------CCCCcEEEEECCEE
Confidence 1234579999999999999999999888875443321 11 1234541 35899999999889
Q ss_pred EEEcCCceeEecCCcccCCCceEEEE-EEcCCCCCCCceeecccceeeeEEEEeCCCCEEEEEcCC
Q 043762 367 MSVSGDRLLYRAPGEVRGIDSVYCFT-FGNSDLLGVEAYVIGHHHQQNVWMEFDLERSRIGMAQVR 431 (443)
Q Consensus 367 ~~i~~~~~i~~~~~~~~~~~~~~C~~-i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfa~~~ 431 (443)
++||+++|+++. . +..|++ |.... .+.||||++|||++|+|||++++|||||+++
T Consensus 269 ~~ip~~~~~~~~------~-~~~C~~~i~~~~---~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 269 FQVSPDSLVFEE------F-QGQCIAGFGYGN---WGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp EEECGGGGEEEE------E-TTEEEESEEEES---SSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred EEECHHHEEEcC------C-CCeEEEEEEcCC---CCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 999999999873 1 568987 65544 2569999999999999999999999999975
No 16
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=1e-54 Score=423.44 Aligned_cols=298 Identities=21% Similarity=0.331 Sum_probs=238.6
Q ss_pred cceEEEEEEEeCCCCceEEEEEeCCCCeeEEeCCCC---CCCCCCCCCCCCCCCcCccCCCCcccCCCCCCCCCCCCCCC
Q 043762 65 HNVSLTVSLTVGTPPQNVSMVLDTGSELSWLHCNNT---RYSYPNAFDPNLSSSYKPVTCSSPTCVNRTRDFTIPVSCDN 141 (443)
Q Consensus 65 ~~~~y~~~i~vGtP~Q~~~l~lDTGSs~~wv~c~~c---~~~~~~~y~p~~Sst~~~~~c~~~~c~~~~~~~~~~~~c~~ 141 (443)
.+..|+++|+||||+|+++|+|||||+++||+|..| .| .++.|+|++|+|++.+.
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~-~~~~y~~~~SsT~~~~~--------------------- 70 (329)
T 1oew_A 13 LDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEV-XQTIYTPSKSTTAKLLS--------------------- 70 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCGGGC--CCCBCGGGCTTCEEEE---------------------
T ss_pred CCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCCcccc-ccCccCCccCccceecC---------------------
Confidence 456799999999999999999999999999998888 44 78899999999998853
Q ss_pred CCCCceEEecCCCCceeeeEEEEEEEeCCccccceEEeEeeccccCCCCCCCCccccccccCCCcch-------------
Q 043762 142 NSLCHATLSYADASSSEGNLASDQFFIGSSEISGLVFGCMDSVFSSSSDEDGKNTGLMGMNRGSLSF------------- 208 (443)
Q Consensus 142 ~~~c~~~i~Y~~g~~~~G~~~~D~v~i~~~~~~~~~fg~a~~~~~~~~~~~~~~~GIlGLg~~~~s~------------- 208 (443)
.|.|.+.|++|+.+.|.+++|+|++++.+++++.|||++.+.+. .......+||||||++..+.
T Consensus 71 --~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~-~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l 147 (329)
T 1oew_A 71 --GATWSISYGDGSSSSGDVYTDTVSVGGLTVTGQAVESAKKVSSS-FTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNA 147 (329)
T ss_dssp --EEEEEEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHH-HHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHH
T ss_pred --CCeEEEEeCCCCcEEEEEEEEEEEECCEEEeeeEEEEEEecCcc-ccccCCCceEEEeccccccccCcCCCCCHHHHH
Confidence 25699999999779999999999999999999999999976431 11124689999999976653
Q ss_pred hhhcccCeEEEEecCCCCceeEEeCCCCCC-CCCCceeeeecccCCCCCCCCCeeEEEEEceEEecCeecCCCCCccccC
Q 043762 209 VSQMGFPKFSYCISGADFSGLLLLGDADLP-WLLPLNYTPLIQMTTPLPYFDRVAYTVQLEGIKVLDKLLPIPRSVFVPD 287 (443)
Q Consensus 209 ~~ql~~~~Fs~~L~~~~~~G~l~fGg~d~~-~~g~l~~~p~~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~ 287 (443)
.+|+..++||+||.+ +..|.|+|||+|++ |.|++.|+|+... ..+|.|.+++|+|+++.+.
T Consensus 148 ~~~i~~~~FS~~L~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~--------~~~~~v~l~~i~v~~~~~~--------- 209 (329)
T 1oew_A 148 KASLDSPVFTADLGY-HAPGTYNFGFIDTTAYTGSITYTAVSTK--------QGFWEWTSTGYAVGSGTFK--------- 209 (329)
T ss_dssp TTTSSSSEEEEECCS-SSCEEEEESCCCTTSSSSCCEEEECBCT--------TSSCEEEEEEEEETTSCCE---------
T ss_pred HHhccCcEEEEEccC-CCCeEEEEeccChHhcccceEEEEccCC--------CceEEEEEeeEEECCeecc---------
Confidence 234556999999986 46899999999965 9999999999743 2689999999999997652
Q ss_pred CCCCCcEEEcccCccccccHHHHHHHHHHHHHHhhhhhhhccCccccccCCcccceecCCCCCCCCCCCeEEEEEeCcEE
Q 043762 288 HTGAGQTMVDSGTQFTFLLGPAYAALRTEFLNQTASILKVLEDQNFVFQGAMDLCYRVPQNQSRLPQLPAVSLVFRGAEM 367 (443)
Q Consensus 288 ~~~~~~ailDTGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~p~i~~~f~g~~~ 367 (443)
..+..++|||||+++++|++++++|.+++ .+........ -|.++|. ..+|+|+|+|+|.++
T Consensus 210 -~~~~~aiiDSGTt~~~lP~~~~~~l~~~i----~~a~~~~~~g----------~~~~~C~----~~~P~i~f~fgg~~~ 270 (329)
T 1oew_A 210 -STSIDGIADTGTTLLYLPATVVSAYWAQV----SGAKSSSSVG----------GYVFPCS----ATLPSFTFGVGSARI 270 (329)
T ss_dssp -EEEEEEEECTTCCSEEECHHHHHHHHTTS----TTCEEETTTT----------EEEEETT----CCCCCEEEEETTEEE
T ss_pred -CCCceEEEeCCCCCEECCHHHHHHHHHhC----CCcEEcCCCC----------EEEEECC----CCCCcEEEEECCEEE
Confidence 22357999999999999999998865554 2211110111 1334443 578999999999999
Q ss_pred EEcCCceeEecCCcccCCCceEEEE-EEcCCCCCCCceeecccceeeeEEEEeC-CCCEEEEEcC
Q 043762 368 SVSGDRLLYRAPGEVRGIDSVYCFT-FGNSDLLGVEAYVIGHHHQQNVWMEFDL-ERSRIGMAQV 430 (443)
Q Consensus 368 ~i~~~~~i~~~~~~~~~~~~~~C~~-i~~~~~~~~~~~iLG~~fl~~~y~vfD~-~~~riGfa~~ 430 (443)
+||+++|+++. ...+...|++ |+... ..+.||||++|||++|+|||+ +++|||||+.
T Consensus 271 ~ip~~~~~~~~----~~~~~~~C~~~i~~~~--~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 271 VIPGDYIDFGP----ISTGSSSCFGGIQSSA--GIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp EECHHHHEEEE----SSTTCSEEEESEEEST--TTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred EECHHHeeeee----cCCCCCeEEEEEEeCC--CCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 99999999873 1123468987 66654 235799999999999999999 9999999974
No 17
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=2.5e-54 Score=422.86 Aligned_cols=289 Identities=21% Similarity=0.371 Sum_probs=240.2
Q ss_pred eEEEEEEEeCCCCceEEEEEeCCCCeeEEe-----CCCC-CCCCCCCCCCCCCCCcCccCCCCcccCCCCCCCCCCCCCC
Q 043762 67 VSLTVSLTVGTPPQNVSMVLDTGSELSWLH-----CNNT-RYSYPNAFDPNLSSSYKPVTCSSPTCVNRTRDFTIPVSCD 140 (443)
Q Consensus 67 ~~y~~~i~vGtP~Q~~~l~lDTGSs~~wv~-----c~~c-~~~~~~~y~p~~Sst~~~~~c~~~~c~~~~~~~~~~~~c~ 140 (443)
..|+++|+||||+|+++|+|||||+++||+ |..| .|..++.|+|++|+|++...
T Consensus 12 ~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~~~~y~~~~SsT~~~~~-------------------- 71 (339)
T 3fv3_A 12 PSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKSSGTFTPSSSSSYKNLG-------------------- 71 (339)
T ss_dssp SSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTTTTCCBCGGGCTTCEEEE--------------------
T ss_pred CEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCCCCCcCCCccCcceeeCC--------------------
Confidence 359999999999999999999999999997 7766 78889999999999998865
Q ss_pred CCCCCceEEecCCCCceeeeEEEEEEEeCCccccceEEeEeeccccCCCCCCCCccccccccCCCcc-------------
Q 043762 141 NNSLCHATLSYADASSSEGNLASDQFFIGSSEISGLVFGCMDSVFSSSSDEDGKNTGLMGMNRGSLS------------- 207 (443)
Q Consensus 141 ~~~~c~~~i~Y~~g~~~~G~~~~D~v~i~~~~~~~~~fg~a~~~~~~~~~~~~~~~GIlGLg~~~~s------------- 207 (443)
|.|.+.|++|+.+.|.+++|+|++++.+++++.|||++... ..+||||||++..+
T Consensus 72 ----~~~~i~Yg~gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~--------~~~GilGLg~~~~~~~~~~~~~~~~~~ 139 (339)
T 3fv3_A 72 ----AAFTIRYGDGSTSQGTWGKDTVTINGVSITGQQIADVTQTS--------VDQGILGIGYTSNEAVYDTSGRQTTPN 139 (339)
T ss_dssp ----EEEEEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES--------SSSCEEECSCGGGCCCBCTTSCBCSCC
T ss_pred ----ceEEEEECCCceEEEEEEEEEEEECCEEECceEEEEEEecC--------CCceeEEecCccccccccccccccCcc
Confidence 46999999999999999999999999999999999998754 36999999997654
Q ss_pred ---hhhhc------ccCeEEEEecCCC-CceeEEeCCCCCC-CCCCceeeeecccCCCCCCCCCeeEEEEEceEEecCee
Q 043762 208 ---FVSQM------GFPKFSYCISGAD-FSGLLLLGDADLP-WLLPLNYTPLIQMTTPLPYFDRVAYTVQLEGIKVLDKL 276 (443)
Q Consensus 208 ---~~~ql------~~~~Fs~~L~~~~-~~G~l~fGg~d~~-~~g~l~~~p~~~~~~~~~~~~~~~w~v~l~~i~v~~~~ 276 (443)
++.|| .+++||+||++.+ ..|.|+|||+|+. |.|++.|+|+... .+|.|++++|+++++.
T Consensus 140 ~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---------~~~~v~l~~i~v~g~~ 210 (339)
T 3fv3_A 140 YDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVTSS---------QALTISLASVNLKGSS 210 (339)
T ss_dssp CCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBCCS---------SSCEEEEEEEEESSCE
T ss_pred CCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEecccC---------ccEEEEEEEEEECCEe
Confidence 44444 3489999998754 6899999999965 9999999999875 5799999999999987
Q ss_pred cCCCCCccccCCCCCCcEEEcccCccccccHHHHHHHHHHHHHHhhhhhhhccCccccccCCcccceecCCCCCCCCCCC
Q 043762 277 LPIPRSVFVPDHTGAGQTMVDSGTQFTFLLGPAYAALRTEFLNQTASILKVLEDQNFVFQGAMDLCYRVPQNQSRLPQLP 356 (443)
Q Consensus 277 ~~~~~~~~~~~~~~~~~ailDTGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~p 356 (443)
+.. ...++|||||++++||.+++++|.+++...... ..... .-|.++|.. ..+|
T Consensus 211 ~~~-----------~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~---~~~~~---------~~~~~~C~~---~~~p 264 (339)
T 3fv3_A 211 FSF-----------GDGALLDSGTTLTYFPSDFAAQLADKAGARLVQ---VARDQ---------YLYFIDCNT---DTSG 264 (339)
T ss_dssp EEE-----------EEEEEECTTBSSEEECHHHHHHHHHHHTCEEEE---EETTE---------EEEEECTTC---CCCS
T ss_pred ecC-----------CccEEEeCCCCCEecCHHHHHHHHHHcCCEEcc---ccccC---------ceEEEecCC---CCCC
Confidence 642 246999999999999999999987777322110 00011 123444532 4689
Q ss_pred eEEEEEe-CcEEEEcCCceeEecCCcccCCCceEEE-EEEcCCCCCCCceeecccceeeeEEEEeCCCCEEEEEcCCCCc
Q 043762 357 AVSLVFR-GAEMSVSGDRLLYRAPGEVRGIDSVYCF-TFGNSDLLGVEAYVIGHHHQQNVWMEFDLERSRIGMAQVRCDL 434 (443)
Q Consensus 357 ~i~~~f~-g~~~~i~~~~~i~~~~~~~~~~~~~~C~-~i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfa~~~c~~ 434 (443)
+|+|+|+ |.+++||+++|+++. .+..|+ +|.. . +.||||++|||++|+|||++++|||||+++|+.
T Consensus 265 ~i~f~f~~g~~~~v~~~~~~~~~-------~~~~C~~~i~~-~----~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~ 332 (339)
T 3fv3_A 265 TTVFNFGNGAKITVPNTEYVYQN-------GDGTCLWGIQP-S----DDTILGDNFLRHAYLLYNLDANTISIAQVKYTT 332 (339)
T ss_dssp EEEEEETTSCEEEEEGGGGEEEC-------SSSCEEESEEE-C----SSCEECHHHHTTEEEEEETTTTEEEEEEBCCCS
T ss_pred cEEEEECCCCEEEECHHHheeeC-------CCCeEEEEEEe-C----CcEEeChHHHhCEEEEEECCCCEEEEEecCCCC
Confidence 9999996 899999999999873 334685 5776 2 359999999999999999999999999999994
No 18
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=7.3e-55 Score=425.50 Aligned_cols=286 Identities=21% Similarity=0.341 Sum_probs=236.9
Q ss_pred ceEEEEEEEeCCCCceEEEEEeCCCCeeEEeCC--CC----------CCCCCCCCCCCCCCCcCccCCCCcccCCCCCCC
Q 043762 66 NVSLTVSLTVGTPPQNVSMVLDTGSELSWLHCN--NT----------RYSYPNAFDPNLSSSYKPVTCSSPTCVNRTRDF 133 (443)
Q Consensus 66 ~~~y~~~i~vGtP~Q~~~l~lDTGSs~~wv~c~--~c----------~~~~~~~y~p~~Sst~~~~~c~~~~c~~~~~~~ 133 (443)
+..|+++|+||||+|+++|+|||||+++||+|. .| .|..++.|||++|+|++...
T Consensus 11 ~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~------------- 77 (334)
T 1j71_A 11 GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLN------------- 77 (334)
T ss_dssp SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEEE-------------
T ss_pred CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccCC-------------
Confidence 345999999999999999999999999999754 44 36678899999999998754
Q ss_pred CCCCCCCCCCCCceEEecCCCCceeeeEEEEEEEeCCccccceEEeEeeccccCCCCCCCCccccccccCCCc-------
Q 043762 134 TIPVSCDNNSLCHATLSYADASSSEGNLASDQFFIGSSEISGLVFGCMDSVFSSSSDEDGKNTGLMGMNRGSL------- 206 (443)
Q Consensus 134 ~~~~~c~~~~~c~~~i~Y~~g~~~~G~~~~D~v~i~~~~~~~~~fg~a~~~~~~~~~~~~~~~GIlGLg~~~~------- 206 (443)
|.|.+.|++|+.+.|.+++|+|++++.+++++.|||++... ..+||||||++..
T Consensus 78 -----------~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~~~~~~fg~~~~~~--------~~~GilGLg~~~~~~~~~~~ 138 (334)
T 1j71_A 78 -----------QDFSIEYGDLTSSQGSFYKDTVGFGGISIKNQQFADVTTTS--------VDQGIMGIGFTADEAGYNLY 138 (334)
T ss_dssp -----------EEEEEEBTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES--------SSSCEEECSCGGGSSTTCCC
T ss_pred -----------CceEEEECCCCEEEEEEEEEEEEECCEEEccEEEEEEEecC--------CCccEEEEcCCcccCccccC
Confidence 56999999997789999999999999999999999998752 5899999999765
Q ss_pred -chhhhc------ccCeEEEEecCC-CCceeEEeCCCCCC-CCCCceeeeecccCCCCCCCCCeeEEEEEceEEecCeec
Q 043762 207 -SFVSQM------GFPKFSYCISGA-DFSGLLLLGDADLP-WLLPLNYTPLIQMTTPLPYFDRVAYTVQLEGIKVLDKLL 277 (443)
Q Consensus 207 -s~~~ql------~~~~Fs~~L~~~-~~~G~l~fGg~d~~-~~g~l~~~p~~~~~~~~~~~~~~~w~v~l~~i~v~~~~~ 277 (443)
+++.|| .+++||+||++. ...|.|+|||+|+. |.|++.|+|+... .+|.|.+++|+|+++.+
T Consensus 139 ~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---------~~~~v~l~~i~v~g~~~ 209 (334)
T 1j71_A 139 DNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVTSS---------VELRVHLGSINFDGTSV 209 (334)
T ss_dssp CCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECCCS---------SSCEEEEEEEEETTEEE
T ss_pred CcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEccCC---------CeEEEEEeEEEECCEec
Confidence 344443 358999999874 37899999999965 9999999999875 57999999999999876
Q ss_pred CCCCCccccCCCCCCcEEEcccCccccccHHHHHHHHHHHHHHhhhhhhhccCccccccCCccccee-cCCCCCCCCCCC
Q 043762 278 PIPRSVFVPDHTGAGQTMVDSGTQFTFLLGPAYAALRTEFLNQTASILKVLEDQNFVFQGAMDLCYR-VPQNQSRLPQLP 356 (443)
Q Consensus 278 ~~~~~~~~~~~~~~~~ailDTGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~-~~~~~~~~~~~p 356 (443)
.. +..++|||||+++++|.+++++|.+++.+... ... ..|. .+| ..+|
T Consensus 210 ~~-----------~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~------~~~---------~~~~~~~C-----~~~p 258 (334)
T 1j71_A 210 ST-----------NADVVLDSGTTITYFSQSTADKFARIVGATWD------SRN---------EIYRLPSC-----DLSG 258 (334)
T ss_dssp EE-----------EEEEEECTTCSSEEECHHHHHHHHHHHTCEEE------TTT---------TEEECSSS-----CCCS
T ss_pred cC-----------CccEEEeCCCCcEecCHHHHHHHHHHcCCccc------CCC---------ceEEEEcC-----CCCC
Confidence 42 24699999999999999999998777733221 111 1233 455 4489
Q ss_pred eEEEEE-eCcEEEEcCCceeEecCCcccCCCceEEEE-EEcCCCCCCCceeecccceeeeEEEEeCCCCEEEEEcCCCCc
Q 043762 357 AVSLVF-RGAEMSVSGDRLLYRAPGEVRGIDSVYCFT-FGNSDLLGVEAYVIGHHHQQNVWMEFDLERSRIGMAQVRCDL 434 (443)
Q Consensus 357 ~i~~~f-~g~~~~i~~~~~i~~~~~~~~~~~~~~C~~-i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfa~~~c~~ 434 (443)
+|+|+| +|.+++|++++|+++. ..+..|+. +...+ .||||++|||++|+|||++++|||||+++|+.
T Consensus 259 ~i~f~f~~g~~~~i~~~~y~~~~------~~~~~C~~~i~~~~-----~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~ 327 (334)
T 1j71_A 259 DAVFNFDQGVKITVPLSELILKD------SDSSICYFGISRND-----ANILGDNFLRRAYIVYDLDDKTISLAQVKYTS 327 (334)
T ss_dssp EEEEEESTTCEEEEEGGGGEEEC------SSSSCEEESEEECT-----TCEECHHHHTTEEEEEETTTTEEEEEEECCCS
T ss_pred ceEEEEcCCcEEEECHHHheeec------CCCCeeEEEEeECC-----CcEEChHhhccEEEEEECCCCEEEEEecCCCC
Confidence 999999 5899999999999984 22335985 66542 49999999999999999999999999999985
No 19
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=1e-54 Score=430.06 Aligned_cols=301 Identities=17% Similarity=0.267 Sum_probs=247.7
Q ss_pred CCCCCCCccceEEEEEEEeCCCCceEEEEEeCCCCeeEEeCCCC---CCCCCCCCCCCCCCCcCccCCCCcccCCCCCCC
Q 043762 57 SPNKLPFHHNVSLTVSLTVGTPPQNVSMVLDTGSELSWLHCNNT---RYSYPNAFDPNLSSSYKPVTCSSPTCVNRTRDF 133 (443)
Q Consensus 57 ~~~~l~~~~~~~y~~~i~vGtP~Q~~~l~lDTGSs~~wv~c~~c---~~~~~~~y~p~~Sst~~~~~c~~~~c~~~~~~~ 133 (443)
...+|.++.+..|+++|+||||+|++.|+|||||+++||+|..| .|..++.|+|++|+|++...
T Consensus 52 ~~~pl~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~~------------- 118 (375)
T 1miq_A 52 DVIELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCSIKNLYDSSKSKSYEKDG------------- 118 (375)
T ss_dssp BCCCGGGTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGGGGSCCBCGGGCTTCEEEE-------------
T ss_pred ceEEcccCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCCcccccCCCcCCCccCCceEECC-------------
Confidence 34788888899999999999999999999999999999999988 58889999999999998754
Q ss_pred CCCCCCCCCCCCceEEecCCCCceeeeEEEEEEEeCCccccceEEeEeec----cccCCCCCCCCccccccccCCCcch-
Q 043762 134 TIPVSCDNNSLCHATLSYADASSSEGNLASDQFFIGSSEISGLVFGCMDS----VFSSSSDEDGKNTGLMGMNRGSLSF- 208 (443)
Q Consensus 134 ~~~~~c~~~~~c~~~i~Y~~g~~~~G~~~~D~v~i~~~~~~~~~fg~a~~----~~~~~~~~~~~~~GIlGLg~~~~s~- 208 (443)
|.|.+.|++|+ +.|.+++|+|++++.++++ .|||++. +. .+.....+||||||++..+.
T Consensus 119 -----------~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~v~~-~Fg~~~~~~~~~~---~f~~~~~dGilGLg~~~~s~~ 182 (375)
T 1miq_A 119 -----------TKVDITYGSGT-VKGFFSKDLVTLGHLSMPY-KFIEVTDTDDLEP---IYSSVEFDGILGLGWKDLSIG 182 (375)
T ss_dssp -----------EEEEEEETTEE-EEEEEEEEEEEETTEEEEE-EEEEEEECGGGTT---HHHHSCCCEEEECSSCCTTCS
T ss_pred -----------cEEEEEeCCCe-EEEEEEEEEEEEcCceECc-EEEEEEecccccc---ccccCCCceEEeCCCCccccc
Confidence 56999999995 8999999999999999999 9999997 32 12234689999999987653
Q ss_pred ---------hhh--cccCeEEEEecCCC-CceeEEeCCCCCC-CCCCceeeeecccCCCCCCCCCeeEEEEEceEEecCe
Q 043762 209 ---------VSQ--MGFPKFSYCISGAD-FSGLLLLGDADLP-WLLPLNYTPLIQMTTPLPYFDRVAYTVQLEGIKVLDK 275 (443)
Q Consensus 209 ---------~~q--l~~~~Fs~~L~~~~-~~G~l~fGg~d~~-~~g~l~~~p~~~~~~~~~~~~~~~w~v~l~~i~v~~~ 275 (443)
.+| +..++||+||++.+ ..|.|+|||+|++ |.|++.|+|+... .+|.|.++ |+|+++
T Consensus 183 ~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---------~~w~v~l~-i~v~g~ 252 (375)
T 1miq_A 183 SIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLNHD---------LYWQIDLD-VHFGKQ 252 (375)
T ss_dssp SCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBSSS---------SSSEEEEE-EEETTE
T ss_pred CCCCHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecCCC---------ceEEEEEE-EEECCE
Confidence 234 45699999998854 6899999999975 9999999999764 68999999 999998
Q ss_pred ecCCCCCccccCCCCCCcEEEcccCccccccHHHHHHHHHHHHHHhhhhhhhccCccccccCCcccceecCCCCCCCCCC
Q 043762 276 LLPIPRSVFVPDHTGAGQTMVDSGTQFTFLLGPAYAALRTEFLNQTASILKVLEDQNFVFQGAMDLCYRVPQNQSRLPQL 355 (443)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~ailDTGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~ 355 (443)
.+ .+..++|||||+++++|.+++++|.+++.+.. . ... ..|.++|.. ..+
T Consensus 253 ~~------------~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~----~--~~~---------g~~~~~C~~---~~~ 302 (375)
T 1miq_A 253 TM------------EKANVIVDSGTTTITAPSEFLNKFFANLNVIK----V--PFL---------PFYVTTCDN---KEM 302 (375)
T ss_dssp EE------------EEEEEEECTTBSSEEECHHHHHHHHHHHTCEE----C--TTS---------SCEEEETTC---TTC
T ss_pred Ec------------ccceEEecCCCccEEcCHHHHHHHHHHhCCcc----c--CCC---------CeEEEECCC---CCC
Confidence 75 12469999999999999999999877763211 0 011 113334432 468
Q ss_pred CeEEEEEeCcEEEEcCCceeEecCCcccCCCceEEE-EEEcCCCCCCCceeecccceeeeEEEEeCCCCEEEEEcCC
Q 043762 356 PAVSLVFRGAEMSVSGDRLLYRAPGEVRGIDSVYCF-TFGNSDLLGVEAYVIGHHHQQNVWMEFDLERSRIGMAQVR 431 (443)
Q Consensus 356 p~i~~~f~g~~~~i~~~~~i~~~~~~~~~~~~~~C~-~i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfa~~~ 431 (443)
|+|+|+|+|.+|+|+|++|+.+.. ..+...|+ +|+..+.. .+.||||++|||++|+|||++++|||||+++
T Consensus 303 P~i~f~f~g~~~~l~~~~yi~~~~----~~g~~~C~~~~~~~~~~-~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 303 PTLEFKSANNTYTLEPEYYMNPIL----EVDDTLCMITMLPVDID-SNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp CCEEEECSSCEEEECGGGSEEESS----SSSCSEEEESEEECCSS-SSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred CcEEEEECCEEEEECHHHhEeecc----CCCCCeEEEEEEECCCC-CCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 999999999999999999999841 11345898 58876532 2579999999999999999999999999975
No 20
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=1.4e-53 Score=417.90 Aligned_cols=294 Identities=19% Similarity=0.322 Sum_probs=238.6
Q ss_pred ceEEEEEEEeCCCCceEEEEEeCCCCeeEEeCC--CC----------CCCCCCCCCCCCCCCcCccCCCCcccCCCCCCC
Q 043762 66 NVSLTVSLTVGTPPQNVSMVLDTGSELSWLHCN--NT----------RYSYPNAFDPNLSSSYKPVTCSSPTCVNRTRDF 133 (443)
Q Consensus 66 ~~~y~~~i~vGtP~Q~~~l~lDTGSs~~wv~c~--~c----------~~~~~~~y~p~~Sst~~~~~c~~~~c~~~~~~~ 133 (443)
+..|+++|+||||+|+++|+|||||+++||+|. .| .|..++.|+|++|+|++...
T Consensus 11 ~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~------------- 77 (342)
T 2qzx_A 11 AITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNLN------------- 77 (342)
T ss_dssp SSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEEE-------------
T ss_pred CeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccCC-------------
Confidence 346999999999999999999999999999744 34 36678899999999998754
Q ss_pred CCCCCCCCCCCCceEEecCCCCceeeeEEEEEEEeCCccccceEEeEeeccccCCCCCCCCccccccccCCCc-------
Q 043762 134 TIPVSCDNNSLCHATLSYADASSSEGNLASDQFFIGSSEISGLVFGCMDSVFSSSSDEDGKNTGLMGMNRGSL------- 206 (443)
Q Consensus 134 ~~~~~c~~~~~c~~~i~Y~~g~~~~G~~~~D~v~i~~~~~~~~~fg~a~~~~~~~~~~~~~~~GIlGLg~~~~------- 206 (443)
|.|.+.|++|+.+.|.+++|+|++++.+++++.|||++... ..+||||||++..
T Consensus 78 -----------~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~--------~~~GilGLg~~~~~~~~~~~ 138 (342)
T 2qzx_A 78 -----------TRFDIKYGDGSYAKGKLYKDTVGIGGVSVRDQLFANVWSTS--------ARKGILGIGFQSGEATEFDY 138 (342)
T ss_dssp -----------EEEEEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEEC--------SSSCEEECSCGGGCSSSSCC
T ss_pred -----------CcEEEEeCCCCeEEEEEEEEEEEECCEEecceEEEEEEecC--------CCcCEEEEccccccCCCccC
Confidence 56999999997789999999999999999999999998752 5899999999765
Q ss_pred -chhhhc------ccCeEEEEecCC-CCceeEEeCCCCCC-CCCCceeeeecccCCCCCCCCCeeEEEEEceEEecCeec
Q 043762 207 -SFVSQM------GFPKFSYCISGA-DFSGLLLLGDADLP-WLLPLNYTPLIQMTTPLPYFDRVAYTVQLEGIKVLDKLL 277 (443)
Q Consensus 207 -s~~~ql------~~~~Fs~~L~~~-~~~G~l~fGg~d~~-~~g~l~~~p~~~~~~~~~~~~~~~w~v~l~~i~v~~~~~ 277 (443)
+++.|| .+++||+||++. ...|.|+|||+|+. |.|++.|+|+... .+|.|.+++|+|+++.+
T Consensus 139 ~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---------~~~~v~l~~i~v~g~~~ 209 (342)
T 2qzx_A 139 DNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPITSE---------KKLTVGLRSVNVRGRNV 209 (342)
T ss_dssp CCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCS---------SSCEEEEEEEEETTEEE
T ss_pred ccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEeccCC---------ceEEEEEeEEEECCEec
Confidence 344443 358999999874 36899999999965 9999999999875 57999999999999876
Q ss_pred CCCCCccccCCCCCCcEEEcccCccccccHHHHHHHHHHHHHHhhhhhhhccCccccccCCcccceecCCCCCCCCCCCe
Q 043762 278 PIPRSVFVPDHTGAGQTMVDSGTQFTFLLGPAYAALRTEFLNQTASILKVLEDQNFVFQGAMDLCYRVPQNQSRLPQLPA 357 (443)
Q Consensus 278 ~~~~~~~~~~~~~~~~ailDTGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~p~ 357 (443)
.. +..++|||||++++||++++++|.+++.+... . ++. ....|.++| ..+|+
T Consensus 210 ~~-----------~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~----~--~~~------~~~~~~~~C-----~~~p~ 261 (342)
T 2qzx_A 210 DA-----------NTNVLLDSGTTISYFTRSIVRNILYAIGAQMK----F--DSA------GNKVYVADC-----KTSGT 261 (342)
T ss_dssp EE-----------EEEEEECTTCSSEEECHHHHHHHHHHHTCEEE----E--CTT------SCEEEEECT-----TCCCE
T ss_pred CC-----------CcCEEEeCCCCCEEcCHHHHHHHHHHhCCeee----e--ccC------CCcEEEEEC-----CCCCc
Confidence 42 24699999999999999999998777632221 0 110 011355566 45899
Q ss_pred EEEEE-eCcEEEEcCCceeEecCCcccCCCceEEEE-EEcCCCCCCCceeecccceeeeEEEEeCCCCEEEEEcCCCCc
Q 043762 358 VSLVF-RGAEMSVSGDRLLYRAPGEVRGIDSVYCFT-FGNSDLLGVEAYVIGHHHQQNVWMEFDLERSRIGMAQVRCDL 434 (443)
Q Consensus 358 i~~~f-~g~~~~i~~~~~i~~~~~~~~~~~~~~C~~-i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfa~~~c~~ 434 (443)
|+|+| +|.+++|++++|+++... ..+..+..|+. +...+ .||||++|||++|+|||++++|||||+++|+.
T Consensus 262 i~f~f~~g~~~~i~~~~~~~~~~~-~~~~~~~~C~~~i~~~~-----~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~ 334 (342)
T 2qzx_A 262 IDFQFGNNLKISVPVSEFLFQTYY-TSGKPFPKCEVRIRESE-----DNILGDNFLRSAYVVYNLDDKKISMAPVKYTS 334 (342)
T ss_dssp EEEEETTTEEEEEEGGGGEECCBC-TTSCBCSSEEESEEECS-----SCEECHHHHTTEEEEEETTTTEEEEEEBCCCS
T ss_pred EEEEECCCcEEEEcHHHhcccccc-cCCCCCCccEEEEecCC-----CcEeChHhhhcEEEEEECCCCEEEEEeeCCCC
Confidence 99999 589999999999987310 00123457986 65542 49999999999999999999999999999975
No 21
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=3.7e-54 Score=433.45 Aligned_cols=301 Identities=17% Similarity=0.236 Sum_probs=249.5
Q ss_pred CCCCCCCccceEEEEEEEeCCCCceEEEEEeCCCCeeEEeCCCC---CCCCCCCCCCCCCCCcCccCCCCcccCCCCCCC
Q 043762 57 SPNKLPFHHNVSLTVSLTVGTPPQNVSMVLDTGSELSWLHCNNT---RYSYPNAFDPNLSSSYKPVTCSSPTCVNRTRDF 133 (443)
Q Consensus 57 ~~~~l~~~~~~~y~~~i~vGtP~Q~~~l~lDTGSs~~wv~c~~c---~~~~~~~y~p~~Sst~~~~~c~~~~c~~~~~~~ 133 (443)
...+|.++.+..|+++|+||||||++.|++||||+++||+|..| .|..++.|+|++|+|++..+
T Consensus 127 ~~~pL~n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C~~~~~ydps~SsT~~~~~------------- 193 (451)
T 3qvc_A 127 DNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESCESKNHYDSSKSKTYEKDD------------- 193 (451)
T ss_dssp CCCCGGGGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGGTTSCCBCGGGCTTCEEEE-------------
T ss_pred CccceeecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCccccCCCCCCCCCCCcccccCC-------------
Confidence 46789999999999999999999999999999999999999998 68889999999999998754
Q ss_pred CCCCCCCCCCCCceEEecCCCCceeeeEEEEEEEeCCccccceEEeEeec----cccCCCCCCCCccccccccCCCcc--
Q 043762 134 TIPVSCDNNSLCHATLSYADASSSEGNLASDQFFIGSSEISGLVFGCMDS----VFSSSSDEDGKNTGLMGMNRGSLS-- 207 (443)
Q Consensus 134 ~~~~~c~~~~~c~~~i~Y~~g~~~~G~~~~D~v~i~~~~~~~~~fg~a~~----~~~~~~~~~~~~~GIlGLg~~~~s-- 207 (443)
|.|.+.|++|+ +.|.+++|+|++++.+++ +.|||++. +.+ +.....+||||||++..+
T Consensus 194 -----------~~f~i~YgdGs-~~G~~~~Dtv~igg~~v~-~~Fg~a~~t~~~~~~---f~~~~~dGILGLg~~~~s~~ 257 (451)
T 3qvc_A 194 -----------TPVKLTSKAGT-ISGIFSKDLVTIGKLSVP-YKFIEMTEIVGFEPF---YSESDVDGVFGLGWKDLSIG 257 (451)
T ss_dssp -----------EEEEEECSSEE-EEEEEEEEEEEETTEEEE-EEEEEEEEEEECTTH---HHHSCCCEEEECSSBCSSSS
T ss_pred -----------CEEEEEECCCE-EEEEEEEEEEEECCEEEE-EEEEEEEeccccCCC---ccCCCCCEEEecCCCccccc
Confidence 46999999995 999999999999999999 99999987 432 233468999999998754
Q ss_pred --------hhhh--cccCeEEEEecCCC-CceeEEeCCCCCC-CCCCceeeeecccCCCCCCCCCeeEEEEEceEEecCe
Q 043762 208 --------FVSQ--MGFPKFSYCISGAD-FSGLLLLGDADLP-WLLPLNYTPLIQMTTPLPYFDRVAYTVQLEGIKVLDK 275 (443)
Q Consensus 208 --------~~~q--l~~~~Fs~~L~~~~-~~G~l~fGg~d~~-~~g~l~~~p~~~~~~~~~~~~~~~w~v~l~~i~v~~~ 275 (443)
+.+| +..++||+||.+.+ ..|.|+|||+|++ |.|++.|+|+... .+|.|.++ |+|+++
T Consensus 258 ~~~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~~~---------~~w~v~l~-I~Vgg~ 327 (451)
T 3qvc_A 258 SIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLNHD---------LMWQVDLD-VHFGNV 327 (451)
T ss_dssp CCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECSST---------TSSEEEEE-EEETTE
T ss_pred CCCCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEcccC---------CeeEEEEE-EEECCc
Confidence 3344 55689999999864 5899999999975 9999999999864 68999999 999987
Q ss_pred ecCCCCCccccCCCCCCcEEEcccCccccccHHHHHHHHHHHHHHhhhhhhhccCccccccCCcccceecCCCCCCCCCC
Q 043762 276 LLPIPRSVFVPDHTGAGQTMVDSGTQFTFLLGPAYAALRTEFLNQTASILKVLEDQNFVFQGAMDLCYRVPQNQSRLPQL 355 (443)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~ailDTGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~ 355 (443)
. .....++|||||+++++|.++++++.+++ ... ..+ ...+|.++|. ...+
T Consensus 328 -~-----------~~~~~aiiDSGTt~i~lP~~~~~~i~~~i----~a~----~~~-------~~g~y~v~C~---~~~~ 377 (451)
T 3qvc_A 328 -S-----------SKKANVILDSATSVITVPTEFFNQFVESA----SVF----KVP-------FLSLYVTTCG---NTKL 377 (451)
T ss_dssp -E-----------EEEEEEEECTTBSSEEECHHHHHHHHTTT----TCE----ECT-------TSSCEEEETT---CTTC
T ss_pred -c-----------CCCceEEEeCCCccccCCHHHHHHHHHHc----CCe----ecC-------CCCeEEeeCC---cCcC
Confidence 1 12357999999999999999998876655 211 111 0124555554 2789
Q ss_pred CeEEEEEeCcEEEEcCCceeEecCCcccCCCceEEEE-EEcCCCCCCCceeecccceeeeEEEEeCCCCEEEEEcCC
Q 043762 356 PAVSLVFRGAEMSVSGDRLLYRAPGEVRGIDSVYCFT-FGNSDLLGVEAYVIGHHHQQNVWMEFDLERSRIGMAQVR 431 (443)
Q Consensus 356 p~i~~~f~g~~~~i~~~~~i~~~~~~~~~~~~~~C~~-i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfa~~~ 431 (443)
|+|+|+|+|.+++||+++|+.+.. ..++..|+. +...+.. .+.||||++|||++|+|||++++|||||+++
T Consensus 378 P~itf~fgg~~i~lp~~~yi~~~~----~~~~~~C~~~i~~~~~~-~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 378 PTLEYRSPNKVYTLEPKQYLEPLE----NIFSALCMLNIVPIDLE-KNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp CCEEEEETTEEEEECHHHHEEECT----TTSTTEEEECEEECCCS-TTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred CcEEEEECCEEEEEcHHHheeecc----cCCCCeEEEEEEeCCCC-CCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 999999999999999999999841 123468985 7765532 3579999999999999999999999999986
No 22
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=1.7e-53 Score=417.52 Aligned_cols=295 Identities=23% Similarity=0.358 Sum_probs=237.3
Q ss_pred ceEEEEEEEeCCCCceEEEEEeCCCCeeEEe-----CCCC-------CCCCCCCCCCCCCCCcCccCCCCcccCCCCCCC
Q 043762 66 NVSLTVSLTVGTPPQNVSMVLDTGSELSWLH-----CNNT-------RYSYPNAFDPNLSSSYKPVTCSSPTCVNRTRDF 133 (443)
Q Consensus 66 ~~~y~~~i~vGtP~Q~~~l~lDTGSs~~wv~-----c~~c-------~~~~~~~y~p~~Sst~~~~~c~~~~c~~~~~~~ 133 (443)
+..|+++|+||||+|+++|+|||||+++||+ |..| .|..++.|+|++|+|++...
T Consensus 11 ~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~------------- 77 (342)
T 3pvk_A 11 QVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDLN------------- 77 (342)
T ss_dssp SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTTCCBCGGGCTTCEEEE-------------
T ss_pred CcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCCCCcCCCccCcceeecC-------------
Confidence 3459999999999999999999999999997 4322 46678999999999998864
Q ss_pred CCCCCCCCCCCCceEEecCCCCceeeeEEEEEEEeCCccccceEEeEeeccccCCCCCCCCccccccccCCCc-------
Q 043762 134 TIPVSCDNNSLCHATLSYADASSSEGNLASDQFFIGSSEISGLVFGCMDSVFSSSSDEDGKNTGLMGMNRGSL------- 206 (443)
Q Consensus 134 ~~~~~c~~~~~c~~~i~Y~~g~~~~G~~~~D~v~i~~~~~~~~~fg~a~~~~~~~~~~~~~~~GIlGLg~~~~------- 206 (443)
|.|.+.|++|+.+.|.+++|+|++++.+++++.|||++... ..+||||||++..
T Consensus 78 -----------~~~~i~Yg~gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~--------~~~GilGLg~~~~~~~~~~~ 138 (342)
T 3pvk_A 78 -----------TPFKIGYGDGSSSQGTLYKDTVGFGGVSIKNQVLADVDSTS--------IDQGILGVGYKTNEAGGSYD 138 (342)
T ss_dssp -----------EEEEEECSSSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES--------SSSCEEECSCGGGCSSCSSC
T ss_pred -----------CeEEEEecCCCeEEEEEEEEEEEECCEEecceEEEEEEccC--------CCccEEEecCccccccccCC
Confidence 46999999997799999999999999999999999998753 5799999999874
Q ss_pred chhhhc------ccCeEEEEecCCC-CceeEEeCCCCCC-CCCCceeeeecccCCCCCCCCCeeEEEEEceEEecCeecC
Q 043762 207 SFVSQM------GFPKFSYCISGAD-FSGLLLLGDADLP-WLLPLNYTPLIQMTTPLPYFDRVAYTVQLEGIKVLDKLLP 278 (443)
Q Consensus 207 s~~~ql------~~~~Fs~~L~~~~-~~G~l~fGg~d~~-~~g~l~~~p~~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~ 278 (443)
+++.|| .+++||+||++.+ ..|.|+|||+|++ |.|++.|+|+... .+|.|++++|+++++.+.
T Consensus 139 ~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---------~~~~v~l~~i~v~g~~~~ 209 (342)
T 3pvk_A 139 NVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVTSD---------RELRISLGSVEVSGKTIN 209 (342)
T ss_dssp CHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCS---------SSCEEEEEEEEETTEEEE
T ss_pred cHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecCcc---------ceEEEEEeEEEECCEEec
Confidence 344443 3489999998754 6899999999965 9999999999876 579999999999999874
Q ss_pred CCCCccccCCCCCCcEEEcccCccccccHHHHHHHHHHHHHHhhhhhhhccCccccccCCcccceecCCCCCCCCCCCeE
Q 043762 279 IPRSVFVPDHTGAGQTMVDSGTQFTFLLGPAYAALRTEFLNQTASILKVLEDQNFVFQGAMDLCYRVPQNQSRLPQLPAV 358 (443)
Q Consensus 279 ~~~~~~~~~~~~~~~ailDTGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~p~i 358 (443)
. .+..++|||||++++||.+++++|.+++..... .... ...+|.++| ...|+|
T Consensus 210 ~----------~~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~----~~~~--------~~~~~~~~C-----~~~p~i 262 (342)
T 3pvk_A 210 T----------DNVDVLLDSGTTITYLQQDLADQIIKAFNGKLT----QDSN--------GNSFYEVDC-----NLSGDV 262 (342)
T ss_dssp E----------EEEEEEECTTCSSEEECHHHHHHHHHHTTCEEE----ECTT--------SCEEEEECS-----CCCSEE
T ss_pred C----------CCceEEEeCCCCCeecCHHHHHHHHHHcCCeec----ccCC--------CceEEEEec-----CCCCce
Confidence 3 124699999999999999999997766622111 1000 112466666 456999
Q ss_pred EEEEe-CcEEEEcCCceeEecCCcccCCCceEEEE-EEcCCCCCCCceeecccceeeeEEEEeCCCCEEEEEcCCCCc
Q 043762 359 SLVFR-GAEMSVSGDRLLYRAPGEVRGIDSVYCFT-FGNSDLLGVEAYVIGHHHQQNVWMEFDLERSRIGMAQVRCDL 434 (443)
Q Consensus 359 ~~~f~-g~~~~i~~~~~i~~~~~~~~~~~~~~C~~-i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfa~~~c~~ 434 (443)
+|+|+ |.+++||+++|+.+... ..+.....|+. +... +.||||++|||++|+|||++++|||||+++|+.
T Consensus 263 ~f~f~~g~~~~vp~~~~~~~~~~-~~g~~~~~C~~~i~~~-----~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~ 334 (342)
T 3pvk_A 263 VFNFSKNAKISVPASEFAASLQG-DDGQPYDKCQLLFDVN-----DANILGDNFLRSAYIVYDLDDNEISLAQVKYTS 334 (342)
T ss_dssp EEEESTTCEEEEEGGGGEEC-----------CEEESEEEC-----TTCEECHHHHTTEEEEEETTTTEEEEEEBCCCS
T ss_pred EEEECCCCEEEEcHHHheeeccc-cCCCcCCeeEEEEeeC-----CCeEeCHHHHhcEEEEEECCCCEEEEEecCCCC
Confidence 99998 89999999999987310 01111257975 6653 359999999999999999999999999999984
No 23
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=7.1e-53 Score=409.77 Aligned_cols=296 Identities=20% Similarity=0.305 Sum_probs=237.0
Q ss_pred cceEEEEEEEeCCCCceEEEEEeCCCCeeEEeCCCC---CCCCCCCCCCCCCCCcCccCCCCcccCCCCCCCCCCCCCCC
Q 043762 65 HNVSLTVSLTVGTPPQNVSMVLDTGSELSWLHCNNT---RYSYPNAFDPNLSSSYKPVTCSSPTCVNRTRDFTIPVSCDN 141 (443)
Q Consensus 65 ~~~~y~~~i~vGtP~Q~~~l~lDTGSs~~wv~c~~c---~~~~~~~y~p~~Sst~~~~~c~~~~c~~~~~~~~~~~~c~~ 141 (443)
.+..|+++|+|| +|+++|+|||||+++||+|..| .|..++.|+|++|+ ++.
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~----------------------- 65 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELPSSEQTGHDLYTPSSSA-TKL----------------------- 65 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSCHHHHTTSCCCBCCSSC-EEC-----------------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCCccccCCCCCCCchhcC-Ccc-----------------------
Confidence 355699999999 9999999999999999999988 56788999999998 432
Q ss_pred CCCCceEEecCCCCceeeeEEEEEEEeCCccccceEEeEeeccccCCCCCCCCccccccccCCCcch-------------
Q 043762 142 NSLCHATLSYADASSSEGNLASDQFFIGSSEISGLVFGCMDSVFSSSSDEDGKNTGLMGMNRGSLSF------------- 208 (443)
Q Consensus 142 ~~~c~~~i~Y~~g~~~~G~~~~D~v~i~~~~~~~~~fg~a~~~~~~~~~~~~~~~GIlGLg~~~~s~------------- 208 (443)
+.|.|.+.|++|+.+.|.+++|+|++++.+++++.|||++.+.+. .......+||||||++..+.
T Consensus 66 -~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~~~-~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l 143 (325)
T 1ibq_A 66 -SGYSWDISYGDGSSASGDVYRDTVTVGGVTTNKQAVEAASKISSE-FVQDTANDGLLGLAFSSINTVQPKAQTTFFDTV 143 (325)
T ss_dssp -TTCBEEEECSSSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHH-HHTSTTCCEEEECSCGGGCCCBSSCCCCHHHHH
T ss_pred -CCCEEEEEeCCCCEEEEEEEEeEEEECCEEEcceEEEEEEecCcc-ccccCCCceEEEeCcccccccCcCCCCCHHHHH
Confidence 236799999999779999999999999999999999999986431 12224789999999976553
Q ss_pred hhhcccCeEEEEecCCCCceeEEeCCCCCC-CCCCceeeeecccCCCCCCCCCeeEEEEEceEEecCeecCCCCCccccC
Q 043762 209 VSQMGFPKFSYCISGADFSGLLLLGDADLP-WLLPLNYTPLIQMTTPLPYFDRVAYTVQLEGIKVLDKLLPIPRSVFVPD 287 (443)
Q Consensus 209 ~~ql~~~~Fs~~L~~~~~~G~l~fGg~d~~-~~g~l~~~p~~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~ 287 (443)
.+|+..++||+||.+. ..|.|+|||+|++ |.|++.|+|+... ..+|.|++++|+|+++.+.
T Consensus 144 ~~~i~~~~FS~~l~~~-~~G~l~fGg~d~~~~~g~l~~~p~~~~--------~~~w~v~l~~i~v~~~~~~--------- 205 (325)
T 1ibq_A 144 KSQLDSPLFAVQLKHD-APGVYDFGYIDDSKYTGSITYTDADSS--------QGYWGFSTDGYSIGDGSSS--------- 205 (325)
T ss_dssp GGGSSSSEEEEEEETT-EEEEEEESSCCGGGBSSCCEEEECBCT--------TSSCEEEECEEEETTSCCB---------
T ss_pred HHhcCCcEEEEEecCC-CCceEEECCcChhhccCceEEEEcCCC--------CceEEEEECcEEECCeecc---------
Confidence 3345569999999863 6899999999965 9999999999743 2689999999999998652
Q ss_pred CCCCCcEEEcccCccccccHHHHHHHHHHHHHHhhhhhhhccCccccccCCcccceecCCCCCCCCCCCeEEEEEeCcEE
Q 043762 288 HTGAGQTMVDSGTQFTFLLGPAYAALRTEFLNQTASILKVLEDQNFVFQGAMDLCYRVPQNQSRLPQLPAVSLVFRGAEM 367 (443)
Q Consensus 288 ~~~~~~ailDTGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~p~i~~~f~g~~~ 367 (443)
..+..++|||||+++++|++++++|.+++ .+........ -|.++|. ..+|+|+|+|+|.++
T Consensus 206 -~~~~~aiiDSGTt~~~lP~~~~~~i~~~i----~~a~~~~~~g----------~~~~~C~----~~~P~i~f~fgg~~~ 266 (325)
T 1ibq_A 206 -SSGFSAIADTGTTLILLDDEIVSAYYEQV----SGAQESYEAG----------GYVFSCS----TDLPDFTVVIGDYKA 266 (325)
T ss_dssp -SCCEEEEECTTCCSEEECHHHHHHHHTTS----TTCBCCSSSS----------SCEEETT----CCCCCEEEEETTEEE
T ss_pred -CCCceEEEeCCCCcEeCCHHHHHHHHHhC----CCceEcCcCC----------eEEEEcC----CCCCcEEEEECCEEE
Confidence 23467999999999999999998866554 2211110111 1333443 578999999999999
Q ss_pred EEcCCceeEecCCcccCCCceEEEE-EEcCCCCCCCceeecccceeeeEEEEeCCCCEEEEEcCC
Q 043762 368 SVSGDRLLYRAPGEVRGIDSVYCFT-FGNSDLLGVEAYVIGHHHQQNVWMEFDLERSRIGMAQVR 431 (443)
Q Consensus 368 ~i~~~~~i~~~~~~~~~~~~~~C~~-i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfa~~~ 431 (443)
+||+++|+++. ...+...|++ |+... ..+.||||++|||++|+|||++++|||||+++
T Consensus 267 ~i~~~~~~~~~----~~~~~~~C~~~i~~~~--~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 267 VVPGKYINYAP----VSTGSSTCYGGIQSNS--GLGLSILGDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp EECHHHHEEEE----SSTTCSEEEESEEECT--TTCSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred EECHHHhcccc----cCCCCCeEEEEEEcCC--CCCceEEChHHhcCEEEEEECCCCEEEeeeCC
Confidence 99999999873 1113368987 76654 23569999999999999999999999999974
No 24
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=1.3e-53 Score=415.68 Aligned_cols=298 Identities=16% Similarity=0.226 Sum_probs=243.9
Q ss_pred CCCCCCccceEEEEEEEeCCCCceEEEEEeCCCCeeEEeCCCC---CC--CCCCCCCCCCCCCcCccCCCCcccCCCCCC
Q 043762 58 PNKLPFHHNVSLTVSLTVGTPPQNVSMVLDTGSELSWLHCNNT---RY--SYPNAFDPNLSSSYKPVTCSSPTCVNRTRD 132 (443)
Q Consensus 58 ~~~l~~~~~~~y~~~i~vGtP~Q~~~l~lDTGSs~~wv~c~~c---~~--~~~~~y~p~~Sst~~~~~c~~~~c~~~~~~ 132 (443)
..+|.++.+..|+++|+|| +|+++|+|||||+++||+|..| .| ..++.|||++| |++...
T Consensus 8 ~~~l~n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~~~y~~~~S-T~~~~~------------ 72 (330)
T 1yg9_A 8 YKLVHVFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECVGGACVCPNLQKYEKLKP-KYISDG------------ 72 (330)
T ss_dssp CSCEEEEECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCCSGGGGSTTCCCCCCSSC-EEEEEE------------
T ss_pred EeeeecCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCCccCcccccCccCCCCC-ceEECC------------
Confidence 3567777788899999999 9999999999999999999999 57 78899999999 997753
Q ss_pred CCCCCCCCCCCCCceEEecCCCCceeeeEEEEEEEeCCccccceEEeEeeccccCCCCCCCCccccccccCCCcc-----
Q 043762 133 FTIPVSCDNNSLCHATLSYADASSSEGNLASDQFFIGSSEISGLVFGCMDSVFSSSSDEDGKNTGLMGMNRGSLS----- 207 (443)
Q Consensus 133 ~~~~~~c~~~~~c~~~i~Y~~g~~~~G~~~~D~v~i~~~~~~~~~fg~a~~~~~~~~~~~~~~~GIlGLg~~~~s----- 207 (443)
|.|.+.|++| ++.|.+++|+|++++.+++++.|||++.+.. .+....++||||||++..+
T Consensus 73 ------------~~~~i~Yg~G-s~~G~~~~Dtv~ig~~~~~~~~fg~~~~~~~--~f~~~~~~GilGLg~~~~s~~~~~ 137 (330)
T 1yg9_A 73 ------------NVQVKFFDTG-SAVGRGIEDSLTISQLTTSQQDIVLADELSQ--EVCILSADVVVGIAAPGCPNALKG 137 (330)
T ss_dssp ------------EEEEEETTTE-EEEEEEEEEEEEETTEEEEEEEEEEEEEECT--HHHHTTCSEEEECSCTTSCCTTSC
T ss_pred ------------CEEEEEECCc-eEEEEEEEEEEEECCEEEcCeEEEEEEEccc--ccccccCceEEEcCcchhccccCC
Confidence 3599999999 5699999999999999999999999998621 1233468999999998776
Q ss_pred ------hhhh--cccCeEEEEecCCC-C--ceeEEeCCCCCC-CCCCceeeeecccCCCCCCCCCeeEEEEEceEEecCe
Q 043762 208 ------FVSQ--MGFPKFSYCISGAD-F--SGLLLLGDADLP-WLLPLNYTPLIQMTTPLPYFDRVAYTVQLEGIKVLDK 275 (443)
Q Consensus 208 ------~~~q--l~~~~Fs~~L~~~~-~--~G~l~fGg~d~~-~~g~l~~~p~~~~~~~~~~~~~~~w~v~l~~i~v~~~ 275 (443)
+.+| + .++||+||++.. . .|.|+|||+|++ |.|++.|+|+... .+|.|++++|+|+++
T Consensus 138 ~~~~~~l~~qg~i-~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---------~~w~v~l~~i~v~~~ 207 (330)
T 1yg9_A 138 KTVLENFVEENLI-APVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGD---------DSWKFRLDGVKIGDT 207 (330)
T ss_dssp CCHHHHHHHTTSS-CSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBSCT---------TSCCEECSEEEETTE
T ss_pred CCHHHHHHhcCCC-CceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECCCC---------CEEEEEeCeEEECCE
Confidence 3344 5 799999998762 2 899999999975 9999999999854 689999999999998
Q ss_pred ecCCCCCccccCCCCCCcEEEcccCccccccHHHHHHHHHHHHHHhhhhhhhccCccccccCC-cccceecCCCCCCCCC
Q 043762 276 LLPIPRSVFVPDHTGAGQTMVDSGTQFTFLLGPAYAALRTEFLNQTASILKVLEDQNFVFQGA-MDLCYRVPQNQSRLPQ 354 (443)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~ailDTGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~C~~~~~~~~~~~~ 354 (443)
.+. ..+..++|||||+++++|++++++|.+++.+. . . .... ..+ ..+|+.. ..
T Consensus 208 ~~~----------~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~----~-~-~~g~---~~~~~~~C~~~-------~~ 261 (330)
T 1yg9_A 208 TVA----------PAGTQAIIDTSKAIIVGPKAYVNPINEAIGCV----V-E-KTTT---RRICKLDCSKI-------PS 261 (330)
T ss_dssp EEE----------CTTCEEEECTTCSSEEEEHHHHHHHHHHHTCE----E-E-ECSS---CEEEEECGGGG-------GG
T ss_pred EEc----------CCCcEEEEecCCccccCCHHHHHHHHHHhCCc----c-c-CCCc---eEEEEEECCCc-------cc
Confidence 763 23457999999999999999999987776221 1 1 1110 012 3345443 57
Q ss_pred CCeEEEEEeCcEEEEcCCceeEecCCcccCCCceEEEE-EEcCCCCCCCceeecccceeeeEEEEeCCCCEEEEEcCC
Q 043762 355 LPAVSLVFRGAEMSVSGDRLLYRAPGEVRGIDSVYCFT-FGNSDLLGVEAYVIGHHHQQNVWMEFDLERSRIGMAQVR 431 (443)
Q Consensus 355 ~p~i~~~f~g~~~~i~~~~~i~~~~~~~~~~~~~~C~~-i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfa~~~ 431 (443)
+|+|+|+|+|.+++|++++|+++. +..|+. |+... ..+.||||++|||++|+|||++++|||||+++
T Consensus 262 ~p~i~f~fgg~~~~l~~~~y~~~~--------~~~C~~~i~~~~--~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 262 LPDVTFVINGRNFNISSQYYIQQN--------GNLCYSGFQPCG--HSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp SCCEEEEETTEEEEECHHHHEEEE--------TTEEEESEEEET--TCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred cCcEEEEECCEEEEECHHHhcccC--------CCcEEEEEEeCC--CCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 999999999999999999999872 458985 76652 22569999999999999999999999999975
No 25
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=7.2e-53 Score=427.77 Aligned_cols=326 Identities=21% Similarity=0.328 Sum_probs=251.4
Q ss_pred CCCCccceEEEEEEEeCCCCceEEEEEeCCCCeeEEeCCCCCCCCCCCCCCCCCCCcCccCCCCcccCCCCCCCCCCCCC
Q 043762 60 KLPFHHNVSLTVSLTVGTPPQNVSMVLDTGSELSWLHCNNTRYSYPNAFDPNLSSSYKPVTCSSPTCVNRTRDFTIPVSC 139 (443)
Q Consensus 60 ~l~~~~~~~y~~~i~vGtP~Q~~~l~lDTGSs~~wv~c~~c~~~~~~~y~p~~Sst~~~~~c~~~~c~~~~~~~~~~~~c 139 (443)
.|....+..|+++|+||||+|+++|+|||||+++||+|..| |..++.|+|++|+|++...
T Consensus 67 ~l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c-c~~~~~y~~~~SsT~~~~~------------------- 126 (455)
T 3lpj_A 67 NLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH-PFLHRYYQRQLSSTYRDLR------------------- 126 (455)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC-TTCSCCCCGGGCTTCEEEE-------------------
T ss_pred cccCCCCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc-cccCCcccCCCCCCcccCC-------------------
Confidence 34445566899999999999999999999999999999986 6778999999999998864
Q ss_pred CCCCCCceEEecCCCCceeeeEEEEEEEeCC-cccc-ceEEeEeeccccCCCCCCCCccccccccCCCcch---------
Q 043762 140 DNNSLCHATLSYADASSSEGNLASDQFFIGS-SEIS-GLVFGCMDSVFSSSSDEDGKNTGLMGMNRGSLSF--------- 208 (443)
Q Consensus 140 ~~~~~c~~~i~Y~~g~~~~G~~~~D~v~i~~-~~~~-~~~fg~a~~~~~~~~~~~~~~~GIlGLg~~~~s~--------- 208 (443)
|.|.+.|++| ++.|.+++|+|+|++ ..+. .+.|+++..... .......++||||||++.++.
T Consensus 127 -----~~~~i~Yg~G-s~~G~~~~Dtv~ig~~~~~~~~~~~~~~~~~~~-~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~ 199 (455)
T 3lpj_A 127 -----KGVYVPYTQG-KWEGELGTDLVSIPHGPNVTVRANIAAITESDK-FFINGSNWEGILGLAYAEIARPDDSLEPFF 199 (455)
T ss_dssp -----EEEEEECSSC-EEEEEEEEEEEECTTSCSCEEEEEEEEEEEEES-CSCTTCCCCEEEECSCGGGCSSCTTSCCHH
T ss_pred -----ccEEEEeCCe-EEEEEEEEEEEEECCCcceeeEEEEEEEEccCc-ccccCCCcceEEEeCccccccccCCCCcHH
Confidence 4699999999 579999999999985 3333 356888876543 122345789999999987642
Q ss_pred ---hhhcc-cCeEEEEecCC-----------CCceeEEeCCCCCC-CCCCceeeeecccCCCCCCCCCeeEEEEEceEEe
Q 043762 209 ---VSQMG-FPKFSYCISGA-----------DFSGLLLLGDADLP-WLLPLNYTPLIQMTTPLPYFDRVAYTVQLEGIKV 272 (443)
Q Consensus 209 ---~~ql~-~~~Fs~~L~~~-----------~~~G~l~fGg~d~~-~~g~l~~~p~~~~~~~~~~~~~~~w~v~l~~i~v 272 (443)
++|.. .++||+||.+. ...|.|+|||+|++ |.|++.|+|+... .+|.|.+++|+|
T Consensus 200 ~~L~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---------~~w~v~l~~i~v 270 (455)
T 3lpj_A 200 DSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE---------WYYEVIIVRVEI 270 (455)
T ss_dssp HHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSB---------TTBBCCEEEEEE
T ss_pred HHHHHccCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecCCC---------ceeEEEEeEEEE
Confidence 23321 27999999752 35899999999975 9999999999875 689999999999
Q ss_pred cCeecCCCCCccccCCCCCCcEEEcccCccccccHHHHHHHHHHHHHHhhhhhhhccCccccccCCcccceecCCCCCCC
Q 043762 273 LDKLLPIPRSVFVPDHTGAGQTMVDSGTQFTFLLGPAYAALRTEFLNQTASILKVLEDQNFVFQGAMDLCYRVPQNQSRL 352 (443)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~ailDTGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~ 352 (443)
+++.+.++...+ ....++|||||++++||.+++++|.+++....... ... ..+ +.++..+|+...... +
T Consensus 271 ~g~~~~~~~~~~-----~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~--~~~-~~~-~~g~~~~C~~~~~~~--~ 339 (455)
T 3lpj_A 271 NGQDLKMDCKEY-----NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTE--KFP-DGF-WLGEQLVCWQAGTTP--W 339 (455)
T ss_dssp TTEECCCCGGGG-----GSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTTS--CCC-HHH-HTTCSCEEESTTCCC--G
T ss_pred CCEEcccccccc-----CCCeEEEECCCcceeCCHHHHHHHHHHhhhhcccc--ccC-ccc-ccCcceecccccCCc--h
Confidence 999987654432 24579999999999999999999988886664310 001 111 233467898864211 2
Q ss_pred CCCCeEEEEEeCc------EEEEcCCceeEecCCcccCCCceEEEEEEcCCCCCCCceeecccceeeeEEEEeCCCCEEE
Q 043762 353 PQLPAVSLVFRGA------EMSVSGDRLLYRAPGEVRGIDSVYCFTFGNSDLLGVEAYVIGHHHQQNVWMEFDLERSRIG 426 (443)
Q Consensus 353 ~~~p~i~~~f~g~------~~~i~~~~~i~~~~~~~~~~~~~~C~~i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riG 426 (443)
..+|+|+|+|+|. +|+|+|++|+.+... .+.....|+++.... ..+.||||++|||++|+|||++++|||
T Consensus 340 ~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~--~~~~~~~C~~f~~~~--~~~~~ILG~~fl~~~yvvfD~~~~rIG 415 (455)
T 3lpj_A 340 NIFPVISLYLMGEVTNQSFRITILPQQYLRPVED--VATSQDDCYKFAISQ--SSTGTVMGAVIMEGFYVVFDRARKRIG 415 (455)
T ss_dssp GGSCCEEEEEECSSTTEEEEEEECHHHHEEEECC--TTCCSCEEEEECEEE--ESSCEEECHHHHTTEEEEEETTTTEEE
T ss_pred hcCCcEEEEEcCCCcCceEEEEECHHHheEeccC--CCCCCceEEEEeccC--CCCcEEEChHHhCCeEEEEECCCCEEE
Confidence 4599999999976 499999999998521 001125898743222 124699999999999999999999999
Q ss_pred EEcCCCCchh
Q 043762 427 MAQVRCDLAG 436 (443)
Q Consensus 427 fa~~~c~~~~ 436 (443)
||+++|+..+
T Consensus 416 fA~~~c~~~~ 425 (455)
T 3lpj_A 416 FAVSACHVHD 425 (455)
T ss_dssp EEEETTCCCC
T ss_pred EEeccccccc
Confidence 9999998765
No 26
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=1.1e-52 Score=417.81 Aligned_cols=323 Identities=20% Similarity=0.300 Sum_probs=248.0
Q ss_pred CCCCCccceEEEEEEEeCCCCceEEEEEeCCCCeeEEeCCCCCCCCCCCCCCCCCCCcCccCCCCcccCCCCCCCCCCCC
Q 043762 59 NKLPFHHNVSLTVSLTVGTPPQNVSMVLDTGSELSWLHCNNTRYSYPNAFDPNLSSSYKPVTCSSPTCVNRTRDFTIPVS 138 (443)
Q Consensus 59 ~~l~~~~~~~y~~~i~vGtP~Q~~~l~lDTGSs~~wv~c~~c~~~~~~~y~p~~Sst~~~~~c~~~~c~~~~~~~~~~~~ 138 (443)
.+|.+..+..|+++|+||||+|+++|+|||||+++||+|..|. ..++.|||++|+|++...
T Consensus 5 ~~l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~-~~~~~f~~~~SsT~~~~~------------------ 65 (383)
T 2ewy_A 5 DNLQGDSGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHS-YIDTYFDTERSSTYRSKG------------------ 65 (383)
T ss_dssp TCEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBT-TBSCCCCGGGCTTCEEEE------------------
T ss_pred eeccCCCCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCC-ccccCcccccCccceeCC------------------
Confidence 4566677778999999999999999999999999999998872 347889999999998764
Q ss_pred CCCCCCCceEEecCCCCceeeeEEEEEEEeCCcccc--ceEEeEeeccccCCCCCCCCccccccccCCCcc---------
Q 043762 139 CDNNSLCHATLSYADASSSEGNLASDQFFIGSSEIS--GLVFGCMDSVFSSSSDEDGKNTGLMGMNRGSLS--------- 207 (443)
Q Consensus 139 c~~~~~c~~~i~Y~~g~~~~G~~~~D~v~i~~~~~~--~~~fg~a~~~~~~~~~~~~~~~GIlGLg~~~~s--------- 207 (443)
|.|.+.|++| ++.|.+++|+|++++.... .+.|+++..... .......++||||||++.++
T Consensus 66 ------~~~~i~Yg~G-s~~G~~~~Dtv~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dGilGLg~~~~s~~~~~~~~~ 137 (383)
T 2ewy_A 66 ------FDVTVKYTQG-SWTGFVGEDLVTIPKGFNTSFLVNIATIFESEN-FFLPGIKWNGILGLAYATLAKPSSSLETF 137 (383)
T ss_dssp ------EEEEEECSSC-EEEEEEEEEEEEETTTEEEEEEEEEEEEEEEES-CSCTTCCCCEEEECSCGGGCSSCTTSCCH
T ss_pred ------ceEEEEECCc-EEEEEEEEEEEEECCCccceeEEEEEEEEeecc-eeeccCcCceEEecCchhcccccccccCH
Confidence 4699999999 5799999999999875332 356777654332 11223578999999998764
Q ss_pred ---hhhhcc-cCeEEEEecC--------CCCceeEEeCCCCCC-CCCCceeeeecccCCCCCCCCCeeEEEEEceEEecC
Q 043762 208 ---FVSQMG-FPKFSYCISG--------ADFSGLLLLGDADLP-WLLPLNYTPLIQMTTPLPYFDRVAYTVQLEGIKVLD 274 (443)
Q Consensus 208 ---~~~ql~-~~~Fs~~L~~--------~~~~G~l~fGg~d~~-~~g~l~~~p~~~~~~~~~~~~~~~w~v~l~~i~v~~ 274 (443)
+++|.. .++||+||.+ ....|.|+|||+|++ |.|++.|+|+... .+|.|.+++|+|++
T Consensus 138 ~~~l~~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---------~~~~v~l~~i~v~g 208 (383)
T 2ewy_A 138 FDSLVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEE---------WYYQIEILKLEIGG 208 (383)
T ss_dssp HHHHHHHHTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECSSB---------TTBBCCEEEEEETT
T ss_pred HHHHHHccCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecCCC---------ceEEEEEEEEEECC
Confidence 344532 4899999964 236899999999965 9999999999875 68999999999999
Q ss_pred eecCCCCCccccCCCCCCcEEEcccCccccccHHHHHHHHHHHHHHhhhhhhhccCccccccCCcccceecCCCCCCCCC
Q 043762 275 KLLPIPRSVFVPDHTGAGQTMVDSGTQFTFLLGPAYAALRTEFLNQTASILKVLEDQNFVFQGAMDLCYRVPQNQSRLPQ 354 (443)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~ailDTGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~ 354 (443)
+.+.++.+.+ ....+||||||+++++|.+++++|.+++.+..... .. ...+ +.++..+|+..+.. .+..
T Consensus 209 ~~~~~~~~~~-----~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~--~~-~~~~-~~~~~~~C~~~~~~--~~~~ 277 (383)
T 2ewy_A 209 QSLNLDCREY-----NADKAIVDSGTTLLRLPQKVFDAVVEAVARASLIP--EF-SDGF-WTGSQLACWTNSET--PWSY 277 (383)
T ss_dssp EECCCCTTTT-----TSSCEEECTTCSSEEEEHHHHHHHHHHHHHTTCSS--CC-CHHH-HHTSEEEEECSSSC--GGGG
T ss_pred EEcccccccc-----CCccEEEEcCCccccCCHHHHHHHHHHHhhhcccc--cC-cccc-ccccccccccCCcc--cHhh
Confidence 9987654432 13579999999999999999999888886543210 00 0111 12235689876421 1246
Q ss_pred CCeEEEEEeCc------EEEEcCCceeEecCCcccCCCceEEEE--EEcCCCCCCCceeecccceeeeEEEEeCCCCEEE
Q 043762 355 LPAVSLVFRGA------EMSVSGDRLLYRAPGEVRGIDSVYCFT--FGNSDLLGVEAYVIGHHHQQNVWMEFDLERSRIG 426 (443)
Q Consensus 355 ~p~i~~~f~g~------~~~i~~~~~i~~~~~~~~~~~~~~C~~--i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riG 426 (443)
+|+|+|+|+|. +++|++++|+.+.. ....+..|++ +.... +.||||++|||++|+|||++++|||
T Consensus 278 ~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~---~~~~~~~C~~~~i~~~~----~~~ILG~~fl~~~yvvfD~~~~rIG 350 (383)
T 2ewy_A 278 FPKISIYLRDENSSRSFRITILPQLYIQPMM---GAGLNYECYRFGISPST----NALVIGATVMEGFYVIFDRAQKRVG 350 (383)
T ss_dssp SCCEEEEEECSSTTEEEEEEECHHHHEEEEC---CCTTCSEEEEESEEEES----SCEEECHHHHTTEEEEEETTTTEEE
T ss_pred CCcEEEEECCCCCCceEEEEEChHHheeecc---cCCCCceeEEEEecCCC----CcEEEChHHhCCeeEEEECCCCeEE
Confidence 89999999974 79999999998741 1123458985 33322 4599999999999999999999999
Q ss_pred EEcCCCCch
Q 043762 427 MAQVRCDLA 435 (443)
Q Consensus 427 fa~~~c~~~ 435 (443)
||+++|+..
T Consensus 351 fA~~~c~~~ 359 (383)
T 2ewy_A 351 FAASPCAEI 359 (383)
T ss_dssp EEECTTCBS
T ss_pred EEeccCCCc
Confidence 999999853
No 27
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=1.2e-53 Score=429.24 Aligned_cols=301 Identities=18% Similarity=0.297 Sum_probs=245.2
Q ss_pred CCCCCccceEEEEEEEeCCCCceEEEEEeCCCCeeEEeCCCC---CCCCCCCCCCCCCCCcCccCCCCcccCCCCCCCCC
Q 043762 59 NKLPFHHNVSLTVSLTVGTPPQNVSMVLDTGSELSWLHCNNT---RYSYPNAFDPNLSSSYKPVTCSSPTCVNRTRDFTI 135 (443)
Q Consensus 59 ~~l~~~~~~~y~~~i~vGtP~Q~~~l~lDTGSs~~wv~c~~c---~~~~~~~y~p~~Sst~~~~~c~~~~c~~~~~~~~~ 135 (443)
.+|.++.+..|+++|+||||+|++.|+|||||+++||+|..| .|..++.|+|++|+|++...
T Consensus 130 ~~L~n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C~~~~~ydps~SsT~~~~~--------------- 194 (453)
T 2bju_A 130 IELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLTKHLYDSSKSRTYEKDG--------------- 194 (453)
T ss_dssp EEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTGGGSCCBCGGGCTTCEEEE---------------
T ss_pred eeeEecCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCCccccCCCCcCCCccCCceeECC---------------
Confidence 456666788999999999999999999999999999999988 68889999999999998754
Q ss_pred CCCCCCCCCCceEEecCCCCceeeeEEEEEEEeCCccccceEEeEeeccc--cCCCCCCCCccccccccCCCcch-----
Q 043762 136 PVSCDNNSLCHATLSYADASSSEGNLASDQFFIGSSEISGLVFGCMDSVF--SSSSDEDGKNTGLMGMNRGSLSF----- 208 (443)
Q Consensus 136 ~~~c~~~~~c~~~i~Y~~g~~~~G~~~~D~v~i~~~~~~~~~fg~a~~~~--~~~~~~~~~~~GIlGLg~~~~s~----- 208 (443)
|.|.+.|++|+ +.|.+++|+|++++.+++ +.|||++.+. +. .+.....+||||||++..+.
T Consensus 195 ---------~~~~i~YgdGs-~~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~~~g~-~f~~~~~dGIlGLg~~~~s~~~~~~ 262 (453)
T 2bju_A 195 ---------TKVEMNYVSGT-VSGFFSKDLVTVGNLSLP-YKFIEVIDTNGFEP-TYTASTFDGILGLGWKDLSIGSVDP 262 (453)
T ss_dssp ---------EEEEEECSSSE-EEEEEEEEEEEETTEEEE-EEEEEEEECGGGTT-HHHHSSCCEEEECSCGGGSTTCCCC
T ss_pred ---------cEEEEEcCCCC-eEEEEEEEEEEEeCcEEE-EEEEEEEEecccCc-cccccCCceeEeccCCcccccCCCc
Confidence 56999999995 899999999999999999 9999999865 21 12234789999999987653
Q ss_pred -----hhh--cccCeEEEEecCCC-CceeEEeCCCCCC-CCCCceeeeecccCCCCCCCCCeeEEEEEceEEecCeecCC
Q 043762 209 -----VSQ--MGFPKFSYCISGAD-FSGLLLLGDADLP-WLLPLNYTPLIQMTTPLPYFDRVAYTVQLEGIKVLDKLLPI 279 (443)
Q Consensus 209 -----~~q--l~~~~Fs~~L~~~~-~~G~l~fGg~d~~-~~g~l~~~p~~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~ 279 (443)
.+| +..++||+||++.+ ..|.|+|||+|+. |.|++.|+|+... .+|.|.++ |+|+++ + .
T Consensus 263 ~~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~~~---------~~w~V~l~-I~Vgg~-~-~ 330 (453)
T 2bju_A 263 IVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLNHD---------LYWQITLD-AHVGNI-M-L 330 (453)
T ss_dssp HHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEEEE---------TTEEEEEE-EEETTE-E-E
T ss_pred HHHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecCCC---------ceEEEEEE-EEECcE-E-e
Confidence 234 45699999998853 6899999999975 9999999999875 68999999 999993 3 1
Q ss_pred CCCccccCCCCCCcEEEcccCccccccHHHHHHHHHHHHHHhhhhhhhccCccccccCCcccceecCCCCCCCCCCCeEE
Q 043762 280 PRSVFVPDHTGAGQTMVDSGTQFTFLLGPAYAALRTEFLNQTASILKVLEDQNFVFQGAMDLCYRVPQNQSRLPQLPAVS 359 (443)
Q Consensus 280 ~~~~~~~~~~~~~~ailDTGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~p~i~ 359 (443)
.+..++|||||+++++|++++++|.+++. .. ... .+ .+|.++|.. ..+|+|+
T Consensus 331 ----------~~~~aIiDSGTsl~~lP~~~~~~l~~~i~----~~----~~~----~g---~~~~v~C~~---~~~P~it 382 (453)
T 2bju_A 331 ----------EKANCIVDSGTSAITVPTDFLNKMLQNLD----VI----KVP----FL---PFYVTLCNN---SKLPTFE 382 (453)
T ss_dssp ----------EEEEEEECTTCCSEEECHHHHHHHTTTSS----CE----ECT----TS---SCEEEETTC---TTCCCEE
T ss_pred ----------ccccEEEcCCCCeEecCHHHHHHHHHHhC----Cc----ccC----CC---ceEEEecCC---CCCCcEE
Confidence 23579999999999999999998766552 11 110 00 134555542 4799999
Q ss_pred EEEeCcEEEEcCCceeEecCCcccCCCceEEE-EEEcCCCCCCCceeecccceeeeEEEEeCCCCEEEEEcCC
Q 043762 360 LVFRGAEMSVSGDRLLYRAPGEVRGIDSVYCF-TFGNSDLLGVEAYVIGHHHQQNVWMEFDLERSRIGMAQVR 431 (443)
Q Consensus 360 ~~f~g~~~~i~~~~~i~~~~~~~~~~~~~~C~-~i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfa~~~ 431 (443)
|+|+|.+++|+|++|+++.. ..+...|+ +|+..+. ..+.||||++|||++|+|||++++|||||+++
T Consensus 383 f~fgg~~~~l~~~~yi~~~~----~~g~~~C~~~~~~~~~-~~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 383 FTSENGKYTLEPEYYLQHIE----DVGPGLCMLNIIGLDF-PVPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp EECSSCEEEECHHHHEEECT----TTSTTEEEECEEECCC-SSCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EEECCEEEEECHHHhEeecc----cCCCceEEEEEEeCCC-CCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 99999999999999999841 11345898 5877653 23479999999999999999999999999986
No 28
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=5.4e-53 Score=410.08 Aligned_cols=293 Identities=20% Similarity=0.308 Sum_probs=236.5
Q ss_pred cceEEEEEEEeCCCCceEEEEEeCCCCeeEEeCCCC---CCCCCCCCCCCCCCCcCccCCCCcccCCCCCCCCCCCCCCC
Q 043762 65 HNVSLTVSLTVGTPPQNVSMVLDTGSELSWLHCNNT---RYSYPNAFDPNLSSSYKPVTCSSPTCVNRTRDFTIPVSCDN 141 (443)
Q Consensus 65 ~~~~y~~~i~vGtP~Q~~~l~lDTGSs~~wv~c~~c---~~~~~~~y~p~~Sst~~~~~c~~~~c~~~~~~~~~~~~c~~ 141 (443)
.+..|+++|+|| +|+++|+|||||+++||+|..| .|..++.|+|++|+ ++.
T Consensus 13 ~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~----------------------- 66 (323)
T 1izd_A 13 NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTPSSERSGHDYYTPGSSA-QKI----------------------- 66 (323)
T ss_dssp GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHTTCCCBCCCTTC-EEE-----------------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCCcccccCCCCCCccccC-Ccc-----------------------
Confidence 456799999999 8999999999999999999888 56788999999998 442
Q ss_pred CCCCceEEecCCCCceeeeEEEEEEEeCCccccceEEeEeeccccCCCCCCCCccccccccCCCcch-------------
Q 043762 142 NSLCHATLSYADASSSEGNLASDQFFIGSSEISGLVFGCMDSVFSSSSDEDGKNTGLMGMNRGSLSF------------- 208 (443)
Q Consensus 142 ~~~c~~~i~Y~~g~~~~G~~~~D~v~i~~~~~~~~~fg~a~~~~~~~~~~~~~~~GIlGLg~~~~s~------------- 208 (443)
+.|.|.+.|++|+.+.|.+++|+|++++.+++++.|||++.+.+. .......+||||||++.++.
T Consensus 67 -~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~~~-~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l 144 (323)
T 1izd_A 67 -DGATWSISYGDGSSASGDVYKDKVTVGGVSYDSQAVESAEKVSSE-FTQDTANDGLLGLAFSSINTVQPTPQKTFFDNV 144 (323)
T ss_dssp -EEEEEEEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHH-HHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHH
T ss_pred -CCCeEEEEcCCCCeEEEEEEEEEEEECCEEECceEEEEEEecccc-ccccCCCceEEecCcccccccCCCCCCCHHHHH
Confidence 235799999999779999999999999999999999999986431 11124689999999986653
Q ss_pred hhhcccCeEEEEecCCCCceeEEeCCCCCC-CCCCceeeeecccCCCCCCCCCeeEEEEEceEEecCeecCCCCCccccC
Q 043762 209 VSQMGFPKFSYCISGADFSGLLLLGDADLP-WLLPLNYTPLIQMTTPLPYFDRVAYTVQLEGIKVLDKLLPIPRSVFVPD 287 (443)
Q Consensus 209 ~~ql~~~~Fs~~L~~~~~~G~l~fGg~d~~-~~g~l~~~p~~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~ 287 (443)
.+|+..++||+||.+. ..|.|+|||+|++ |.|++.|+|+... ..+|.|++++|+|++ .+.
T Consensus 145 ~~~i~~~~FS~~L~~~-~~G~l~fGg~d~~~~~g~l~~~p~~~~--------~~~w~v~l~~i~v~~-~~~--------- 205 (323)
T 1izd_A 145 KSSLSEPIFAVALKHN-APGVYDFGYTDSSKYTGSITYTDVDNS--------QGFWGFTADGYSIGS-DSS--------- 205 (323)
T ss_dssp GGGSSSSEEEEECCTT-SCEEEEESSCCTTSEEEEEEEEECBCT--------TSSCEEEESEEEETT-EEE---------
T ss_pred HHhccCcEEEEEccCC-CCCEEEECCcCccccccceEEEECCCC--------CceEEEEECeEEECC-ccc---------
Confidence 2456679999999863 6899999999975 9999999999743 268999999999999 442
Q ss_pred CCCCCcEEEcccCccccccHHHHHHHHHHHHHHhhhhhhhccCccccccCCcccceecCCCCCCCCCCCeEEEEEeCcEE
Q 043762 288 HTGAGQTMVDSGTQFTFLLGPAYAALRTEFLNQTASILKVLEDQNFVFQGAMDLCYRVPQNQSRLPQLPAVSLVFRGAEM 367 (443)
Q Consensus 288 ~~~~~~ailDTGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~p~i~~~f~g~~~ 367 (443)
..+..++|||||+++++|++++++|.+++ .+.... ... ..|.++|. +.+|+|+|+|+|.++
T Consensus 206 -~~~~~aiiDSGTs~~~lp~~~~~~i~~~i----~ga~~~-~~~---------g~~~~~C~----~~~P~i~f~fgg~~~ 266 (323)
T 1izd_A 206 -SDSITGIADTGTTLLLLDDSIVDAYYEQV----NGASYD-SSQ---------GGYVFPSS----ASLPDFSVTIGDYTA 266 (323)
T ss_dssp -CCCEEEEECTTCCSEEECHHHHHHHHTTS----TTCEEE-TTT---------TEEEEETT----CCCCCEEEEETTEEE
T ss_pred -CCCceEEEeCCCcceeCCHHHHHHHHHhC----CCcEEc-CcC---------CEEEEECC----CCCceEEEEECCEEE
Confidence 33467999999999999999998866554 221110 011 12444553 578999999999999
Q ss_pred EEcCCceeEecCCcccCCCceEEEE-EEcCCCCCCCceeecccceeeeEEEEeCCCCEEEEEcCC
Q 043762 368 SVSGDRLLYRAPGEVRGIDSVYCFT-FGNSDLLGVEAYVIGHHHQQNVWMEFDLERSRIGMAQVR 431 (443)
Q Consensus 368 ~i~~~~~i~~~~~~~~~~~~~~C~~-i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfa~~~ 431 (443)
+||+++|+++. .++..|++ |+..+ ..+.||||++|||++|+|||++++|||||+++
T Consensus 267 ~i~~~~~~~~~------~~~~~C~~~i~~~~--~~~~~IlG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1izd_A 267 TVPGEYISFAD------VGNGQTFGGIQSNS--GIGFSIFGDVFLKSQYVVFDASGPRLGFAAQA 323 (323)
T ss_dssp EECHHHHEEEE------CSTTEEEESEEECT--TTSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ecCHHHeEEec------CCCCeEEEEEEcCC--CCCcEEEChHHhcCEEEEEECCCCEEEEeeCC
Confidence 99999999874 23568987 77654 23569999999999999999999999999864
No 29
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=3.3e-52 Score=416.93 Aligned_cols=326 Identities=21% Similarity=0.326 Sum_probs=248.6
Q ss_pred CCCCccceEEEEEEEeCCCCceEEEEEeCCCCeeEEeCCCCCCCCCCCCCCCCCCCcCccCCCCcccCCCCCCCCCCCCC
Q 043762 60 KLPFHHNVSLTVSLTVGTPPQNVSMVLDTGSELSWLHCNNTRYSYPNAFDPNLSSSYKPVTCSSPTCVNRTRDFTIPVSC 139 (443)
Q Consensus 60 ~l~~~~~~~y~~~i~vGtP~Q~~~l~lDTGSs~~wv~c~~c~~~~~~~y~p~~Sst~~~~~c~~~~c~~~~~~~~~~~~c 139 (443)
.|....+..|+++|+||||+|+++|+|||||+++||+|..| |..++.|+|++|+|++...
T Consensus 21 ~l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c-~~~~~~y~~~~SsT~~~~~------------------- 80 (402)
T 3vf3_A 21 NLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH-PFLHRYYQRQLSSTYRDLR------------------- 80 (402)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC-TTCSCCCCGGGCTTCEEEE-------------------
T ss_pred eccCCCCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC-CcccCCcCcccCcccccCC-------------------
Confidence 44445556899999999999999999999999999999986 6678999999999998864
Q ss_pred CCCCCCceEEecCCCCceeeeEEEEEEEeCC-ccccc-eEEeEeeccccCCCCCCCCccccccccCCCcch--------h
Q 043762 140 DNNSLCHATLSYADASSSEGNLASDQFFIGS-SEISG-LVFGCMDSVFSSSSDEDGKNTGLMGMNRGSLSF--------V 209 (443)
Q Consensus 140 ~~~~~c~~~i~Y~~g~~~~G~~~~D~v~i~~-~~~~~-~~fg~a~~~~~~~~~~~~~~~GIlGLg~~~~s~--------~ 209 (443)
|.|.+.|++| ++.|.+++|+|+|++ ..+.. +.|+++..... .......++||||||++..+. +
T Consensus 81 -----~~~~i~Yg~G-s~~G~~~~D~v~ig~~~~~~~~~~~~~~~~~~~-~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~ 153 (402)
T 3vf3_A 81 -----KGVYVPYTQG-KWEGELGTDLVSIPHGPNVTVRANIAAITESDK-FFINGSNWEGILGLAYAEIARPDDSLEPFF 153 (402)
T ss_dssp -----EEEEEECSSC-EEEEEEEEEEEECTTSCSCEEEEEEEEEEEEES-CSCTTCCCCEEEECSCGGGCSSCTTSCCHH
T ss_pred -----CEEEEEECcE-EEEEEEEEEEEEECCccccceeeeEEEEEcccc-ccccCCCccceEEcCchhhcccCCcCCcHH
Confidence 4699999999 579999999999984 44443 34777665443 222345789999999976542 2
Q ss_pred hhcc-----cCeEEEEecCC-----------CCceeEEeCCCCCC-CCCCceeeeecccCCCCCCCCCeeEEEEEceEEe
Q 043762 210 SQMG-----FPKFSYCISGA-----------DFSGLLLLGDADLP-WLLPLNYTPLIQMTTPLPYFDRVAYTVQLEGIKV 272 (443)
Q Consensus 210 ~ql~-----~~~Fs~~L~~~-----------~~~G~l~fGg~d~~-~~g~l~~~p~~~~~~~~~~~~~~~w~v~l~~i~v 272 (443)
++|. .++||+||.+. ...|.|+|||+|++ |.|+++|+|+... .+|.|.+++|+|
T Consensus 154 ~~L~~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---------~~w~v~l~~i~v 224 (402)
T 3vf3_A 154 DSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE---------WYYEVIIVRVEI 224 (402)
T ss_dssp HHHHHHSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECSSB---------TTBEECEEEEEE
T ss_pred HHHHHccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCCcC---------cEEEEEEeEEEE
Confidence 2321 27999999742 35799999999975 9999999999875 689999999999
Q ss_pred cCeecCCCCCccccCCCCCCcEEEcccCccccccHHHHHHHHHHHHHHhhhhhhhccCccccccCCcccceecCCCCCCC
Q 043762 273 LDKLLPIPRSVFVPDHTGAGQTMVDSGTQFTFLLGPAYAALRTEFLNQTASILKVLEDQNFVFQGAMDLCYRVPQNQSRL 352 (443)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~ailDTGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~ 352 (443)
+++.+.++...+ ....++|||||+++++|.+++++|.+++....... ...+ .+ +.++..+|+...... +
T Consensus 225 ~g~~~~~~~~~~-----~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~--~~~~-~~-~~~~~~~C~~~~~~~--~ 293 (402)
T 3vf3_A 225 NGQDLKMDCKEY-----NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTE--KFPD-GF-WLGEQLVCWQAGTTP--W 293 (402)
T ss_dssp TTEECCCCGGGG-----GSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTS--CCCT-TG-GGTCSCEEEETTCCC--G
T ss_pred CCEEeccccccc-----CCCeEEEECCCCcccCCHHHHHHHHHHHhhhcccc--ccCc-cc-cccccccccccccch--H
Confidence 999987654432 24579999999999999999999988886664310 0111 11 233467899864211 2
Q ss_pred CCCCeEEEEEeCc------EEEEcCCceeEecCCcccCCCceEEEEEEcCCCCCCCceeecccceeeeEEEEeCCCCEEE
Q 043762 353 PQLPAVSLVFRGA------EMSVSGDRLLYRAPGEVRGIDSVYCFTFGNSDLLGVEAYVIGHHHQQNVWMEFDLERSRIG 426 (443)
Q Consensus 353 ~~~p~i~~~f~g~------~~~i~~~~~i~~~~~~~~~~~~~~C~~i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riG 426 (443)
..+|+|+|+|+|. +++|+|++|+.+... .+.....|+++.... ..+.||||++|||++|+|||++++|||
T Consensus 294 ~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~--~~~~~~~C~~~~~~~--~~~~~ILG~~fl~~~yvvfD~~~~rIG 369 (402)
T 3vf3_A 294 NIFPVISLYLMGEVTNQSFRITILPQQYLRPVED--VATSQDDCYKFAISQ--SSTGTVMGAVIMEGFYVVFDRARKRIG 369 (402)
T ss_dssp GGSCCEEEEEECSSTTEEEEEEECHHHHEEECCC--GGGTTEEEEEECEEE--ESSCEEECHHHHTTEEEEEEGGGTEEE
T ss_pred hhCCceEEEEecCCCCceEEEEECHHHheehhcc--CCCCCceEEEEeccC--CCCcEEEChHHhCCeEEEEECCCCEEE
Confidence 4799999999976 499999999998511 001124898642221 124699999999999999999999999
Q ss_pred EEcCCCCchh
Q 043762 427 MAQVRCDLAG 436 (443)
Q Consensus 427 fa~~~c~~~~ 436 (443)
||+++|+...
T Consensus 370 fA~~~c~~~~ 379 (402)
T 3vf3_A 370 FAVSACHVHD 379 (402)
T ss_dssp EEEETTCCBC
T ss_pred EEecccCccc
Confidence 9999999754
No 30
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=6.1e-52 Score=413.98 Aligned_cols=325 Identities=21% Similarity=0.332 Sum_probs=249.7
Q ss_pred CCCCCCccceEEEEEEEeCCCCceEEEEEeCCCCeeEEeCCCCCCCCCCCCCCCCCCCcCccCCCCcccCCCCCCCCCCC
Q 043762 58 PNKLPFHHNVSLTVSLTVGTPPQNVSMVLDTGSELSWLHCNNTRYSYPNAFDPNLSSSYKPVTCSSPTCVNRTRDFTIPV 137 (443)
Q Consensus 58 ~~~l~~~~~~~y~~~i~vGtP~Q~~~l~lDTGSs~~wv~c~~c~~~~~~~y~p~~Sst~~~~~c~~~~c~~~~~~~~~~~ 137 (443)
..+|+...+..|+++|+||||+|+++|+|||||+++||+|..|. ..++.|+|++|+|++...
T Consensus 12 ~~~l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~-~~~~~y~~~~SsT~~~~~----------------- 73 (395)
T 2qp8_A 12 VDNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHP-FLHRYYQRQLSSTYRDLR----------------- 73 (395)
T ss_dssp TTCEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCT-TCSCCCCGGGCTTCEEEE-----------------
T ss_pred eeecCCCCCceEEEEEEecCCCceEEEEEecCCCceEEECCCCc-cccCCcCcccCCCceeCC-----------------
Confidence 44566666778999999999999999999999999999999873 347899999999998764
Q ss_pred CCCCCCCCceEEecCCCCceeeeEEEEEEEeC-Ccccc-ceEEeEeeccccCCCCCCCCccccccccCCCcc--------
Q 043762 138 SCDNNSLCHATLSYADASSSEGNLASDQFFIG-SSEIS-GLVFGCMDSVFSSSSDEDGKNTGLMGMNRGSLS-------- 207 (443)
Q Consensus 138 ~c~~~~~c~~~i~Y~~g~~~~G~~~~D~v~i~-~~~~~-~~~fg~a~~~~~~~~~~~~~~~GIlGLg~~~~s-------- 207 (443)
|.|.+.|++| ++.|.+++|+|+++ +..+. .+.|++...... ........+||||||++.++
T Consensus 74 -------~~~~i~Yg~G-s~~G~~~~Dtv~ig~g~~~~~~~~~~~~~~~~~-~f~~~~~~dGIlGLg~~~~s~~~~~~~~ 144 (395)
T 2qp8_A 74 -------KGVYVPYTQG-KWEGELGTDLVSIPHGPNVTVRANIAAITESDK-FFINGSNWEGILGLAYAEIARPDDSLEP 144 (395)
T ss_dssp -------EEEEEECSSC-EEEEEEEEEEEECTTSCSCEEEEEEEEEEEEES-CSCTTCCCCEEEECSCGGGCSSCTTSCC
T ss_pred -------ceEEEEECCc-EEEEEEEeEEEEECCCCCceEEEEEEEEEccCc-ccccccCccceEEcCchhhccCCCCCCC
Confidence 5699999999 56999999999998 55554 356777665432 11123578999999997763
Q ss_pred ----hhhhcc-cCeEEEEecCC-----------CCceeEEeCCCCCC-CCCCceeeeecccCCCCCCCCCeeEEEEEceE
Q 043762 208 ----FVSQMG-FPKFSYCISGA-----------DFSGLLLLGDADLP-WLLPLNYTPLIQMTTPLPYFDRVAYTVQLEGI 270 (443)
Q Consensus 208 ----~~~ql~-~~~Fs~~L~~~-----------~~~G~l~fGg~d~~-~~g~l~~~p~~~~~~~~~~~~~~~w~v~l~~i 270 (443)
+++|.. .++||+||.+. ...|.|+|||+|++ |.|++.|+|+... .+|.|.+++|
T Consensus 145 ~~~~l~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---------~~~~v~l~~i 215 (395)
T 2qp8_A 145 FFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE---------WYYEVIIVRV 215 (395)
T ss_dssp HHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSB---------TTBBCCEEEE
T ss_pred HHHHHHHccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccCCC---------ceEEEEEEEE
Confidence 334422 27999999753 25799999999965 9999999999864 6899999999
Q ss_pred EecCeecCCCCCccccCCCCCCcEEEcccCccccccHHHHHHHHHHHHHHhhhhhhhccCccccccCCcccceecCCCCC
Q 043762 271 KVLDKLLPIPRSVFVPDHTGAGQTMVDSGTQFTFLLGPAYAALRTEFLNQTASILKVLEDQNFVFQGAMDLCYRVPQNQS 350 (443)
Q Consensus 271 ~v~~~~~~~~~~~~~~~~~~~~~ailDTGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~ 350 (443)
+|+++.+.++...+. ...+||||||+++++|.+++++|.+++....... .. ...+ +.++..+|+..+..
T Consensus 216 ~v~g~~~~~~~~~~~-----~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~--~~-~~~~-~~~~~~~C~~~~~~-- 284 (395)
T 2qp8_A 216 EINGQDLKMDCKEYN-----YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTE--KF-PDGF-WLGEQLVCWQAGTT-- 284 (395)
T ss_dssp EETTEECCCCGGGGG-----SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTS--CC-CHHH-HTTCSCEEESTTCC--
T ss_pred EECCEEcccCccccC-----CceEEEEcCCCcEecCHHHHHHHHHHHhhhcccc--cC-Cccc-cccccccccccccc--
Confidence 999999876554332 3579999999999999999999988886654311 00 0111 12235689876421
Q ss_pred CCCCCCeEEEEEeCc------EEEEcCCceeEecCCcccCCCceEEEE--EEcCCCCCCCceeecccceeeeEEEEeCCC
Q 043762 351 RLPQLPAVSLVFRGA------EMSVSGDRLLYRAPGEVRGIDSVYCFT--FGNSDLLGVEAYVIGHHHQQNVWMEFDLER 422 (443)
Q Consensus 351 ~~~~~p~i~~~f~g~------~~~i~~~~~i~~~~~~~~~~~~~~C~~--i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~ 422 (443)
.+..+|+|+|+|+|. +++|+|++|+.+... .......|++ +.... +.||||++|||++|+|||+++
T Consensus 285 ~~~~~P~i~f~f~g~~~~~~~~~~l~p~~yi~~~~~--~~~~~~~C~~~~i~~~~----~~~ILG~~fl~~~yvvfD~~~ 358 (395)
T 2qp8_A 285 PWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVED--VATSQDDCYKFAISQSS----TGTVMGAVIMEGFYVVFDRAR 358 (395)
T ss_dssp CGGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECC--TTCCSCEEEEECEEEES----SCEEECHHHHTTEEEEEETTT
T ss_pred hHhhCCcEEEEEccCCCCceEEEEECHHHhEeeccc--CCCCCceEEEEEecCCC----CcEEEChHHhCCeeEEEECCC
Confidence 124699999999975 699999999987411 0112348974 54322 469999999999999999999
Q ss_pred CEEEEEcCCCCch
Q 043762 423 SRIGMAQVRCDLA 435 (443)
Q Consensus 423 ~riGfa~~~c~~~ 435 (443)
+|||||+++|+..
T Consensus 359 ~rIGfA~~~c~~~ 371 (395)
T 2qp8_A 359 KRIGFAVSACHVH 371 (395)
T ss_dssp TEEEEEEETTCCC
T ss_pred CEEEEEeccCCCC
Confidence 9999999999863
No 31
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=5.7e-52 Score=411.96 Aligned_cols=324 Identities=20% Similarity=0.410 Sum_probs=250.0
Q ss_pred cceEEEEEEEeCCCCceEEEEEeCCCCeeEEeCCCCCCCCCCCCCCCCCCCcCccCCCCcccCCCCCCCCCCCCCCC---
Q 043762 65 HNVSLTVSLTVGTPPQNVSMVLDTGSELSWLHCNNTRYSYPNAFDPNLSSSYKPVTCSSPTCVNRTRDFTIPVSCDN--- 141 (443)
Q Consensus 65 ~~~~y~~~i~vGtP~Q~~~l~lDTGSs~~wv~c~~c~~~~~~~y~p~~Sst~~~~~c~~~~c~~~~~~~~~~~~c~~--- 141 (443)
.+..|+++|+|||| |+|||||+++||+|..| .+++.+.|+++.|...++. .++.|..
T Consensus 12 ~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~-------------~~~~~~~C~s~~C~~~~~~--~~~sc~~~~~ 71 (381)
T 1t6e_X 12 ATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGG-------------QPPAEIPCSSPTCLLANAY--PAPGCPAPSC 71 (381)
T ss_dssp TTCCEEEEEETTEE-----EEEETTCCCEEECCCTT-------------CCCCCCBTTSHHHHHHHSS--CCTTCCCCCC
T ss_pred CCcEEEEEEeCCCE-----EEEECCCCceEEeCCCC-------------CCCCccCCCCchhccccCC--CCCCCCCccC
Confidence 35569999999998 99999999999999864 2356788988888764331 1235652
Q ss_pred -----CCCC-ceEEecCCCCceeeeEEEEEEEeCC----ccccce----EEeEeeccccCCCCCCCCccccccccCCCcc
Q 043762 142 -----NSLC-HATLSYADASSSEGNLASDQFFIGS----SEISGL----VFGCMDSVFSSSSDEDGKNTGLMGMNRGSLS 207 (443)
Q Consensus 142 -----~~~c-~~~i~Y~~g~~~~G~~~~D~v~i~~----~~~~~~----~fg~a~~~~~~~~~~~~~~~GIlGLg~~~~s 207 (443)
++.| .|.+.|++|+.+.|.+++|+|++++ ..++++ .|||++.+... .....++||||||++.++
T Consensus 72 ~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~--~~~~~~dGIlGLg~~~~s 149 (381)
T 1t6e_X 72 GSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLA--SLPRGSTGVAGLANSGLA 149 (381)
T ss_dssp ------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGT--TSCTTEEEEEECSSSTTS
T ss_pred CcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccC--CCCCCCceEEEeCCCcch
Confidence 3568 5999999997789999999999984 456665 56999876321 124679999999999999
Q ss_pred hhhhcc-----cCeEEEEecCCCCceeEEeCCCCC---CCCCCceeeeecccCCCCCCCCCeeEEEEEceEEecCeecCC
Q 043762 208 FVSQMG-----FPKFSYCISGADFSGLLLLGDADL---PWLLPLNYTPLIQMTTPLPYFDRVAYTVQLEGIKVLDKLLPI 279 (443)
Q Consensus 208 ~~~ql~-----~~~Fs~~L~~~~~~G~l~fGg~d~---~~~g~l~~~p~~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~ 279 (443)
++.|+. .++||+||.+. ..|+|+||++|. +|.|++.|+|+...+.. .+|.|+|++|+|+++.+.+
T Consensus 150 ~~~ql~~~~~~~~~FS~~L~~~-~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~------~~y~v~l~~i~vg~~~~~~ 222 (381)
T 1t6e_X 150 LPAQVASAQKVANRFLLCLPTG-GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGS------PAHYISARSIVVGDTRVPV 222 (381)
T ss_dssp HHHHHHHHHTCCSEEEEECCSS-SCEEEEESCCSCSCHHHHTTCCEEECBCCTTC------CSCEECEEEEEETTEECCC
T ss_pred hHHHHhhhcccCceEEEEeCCC-CCeeEEeCCcccccccccCcceeeccccCCCC------cceEEEEEEEEEcCEEecC
Confidence 998875 38999999875 689999999885 37899999999875211 3466999999999999876
Q ss_pred CCCccccCCCCCCcEEEcccCccccccHHHHHHHHHHHHHHhhh------hhhhccCccccccCCcccceecCCCCC--C
Q 043762 280 PRSVFVPDHTGAGQTMVDSGTQFTFLLGPAYAALRTEFLNQTAS------ILKVLEDQNFVFQGAMDLCYRVPQNQS--R 351 (443)
Q Consensus 280 ~~~~~~~~~~~~~~ailDTGt~~~~lp~~~~~~l~~~~~~~~~~------~~~~~~~~~~~~~~~~~~C~~~~~~~~--~ 351 (443)
+...+. ...+||||||++++||+++|++|.+++.+++.. .......+ ..++..|++.++... .
T Consensus 223 ~~~~~~-----~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~C~~~~~~~~~~~ 293 (381)
T 1t6e_X 223 PEGALA-----TGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEA----VAPFGVCYDTKTLGNNLG 293 (381)
T ss_dssp CTTCSC-----TTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECC----CTTCSCEEEGGGCCEETT
T ss_pred CHHHcc-----CCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCC----CCCCCccCCCCCCccccc
Confidence 655442 356999999999999999999999999887752 11010010 113578998865310 0
Q ss_pred CCCCCeEEEEEe-CcEEEEcCCceeEecCCcccCCCceEEEEEEcCCCC-----CCCceeecccceeeeEEEEeCCCCEE
Q 043762 352 LPQLPAVSLVFR-GAEMSVSGDRLLYRAPGEVRGIDSVYCFTFGNSDLL-----GVEAYVIGHHHQQNVWMEFDLERSRI 425 (443)
Q Consensus 352 ~~~~p~i~~~f~-g~~~~i~~~~~i~~~~~~~~~~~~~~C~~i~~~~~~-----~~~~~iLG~~fl~~~y~vfD~~~~ri 425 (443)
...+|+|+|+|+ |.+|+|++++|+++. ..+..|++|+..... ..+.||||+.|||++|+|||++++||
T Consensus 294 ~~~~P~i~f~f~gg~~~~l~~~~y~~~~------~~~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~ri 367 (381)
T 1t6e_X 294 GYAVPNVQLGLDGGSDWTMTGKNSMVDV------KQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRL 367 (381)
T ss_dssp EECCCCEEEEETTSCEEEECHHHHEEEE------ETTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEE
T ss_pred CCcCCeEEEEECCCcEEEeCCCeEEEEc------CCCeEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEE
Confidence 137899999998 599999999999984 246689998876531 12579999999999999999999999
Q ss_pred EEEcCCC
Q 043762 426 GMAQVRC 432 (443)
Q Consensus 426 Gfa~~~c 432 (443)
|||+++.
T Consensus 368 GfA~~~~ 374 (381)
T 1t6e_X 368 GFSRLPH 374 (381)
T ss_dssp EEEECCT
T ss_pred EEecccC
Confidence 9999875
No 32
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=1e-52 Score=408.31 Aligned_cols=293 Identities=19% Similarity=0.313 Sum_probs=235.2
Q ss_pred cceEEEEEEEeCCCCceEEEEEeCCCCeeEEeCCCC---CCCCCCCCCCCCCCCcCccCCCCcccCCCCCCCCCCCCCCC
Q 043762 65 HNVSLTVSLTVGTPPQNVSMVLDTGSELSWLHCNNT---RYSYPNAFDPNLSSSYKPVTCSSPTCVNRTRDFTIPVSCDN 141 (443)
Q Consensus 65 ~~~~y~~~i~vGtP~Q~~~l~lDTGSs~~wv~c~~c---~~~~~~~y~p~~Sst~~~~~c~~~~c~~~~~~~~~~~~c~~ 141 (443)
.+..|+++|+|| +|+++|+|||||+++||+|..| .|..++.|+|++|+ ++.
T Consensus 13 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~----------------------- 66 (323)
T 1bxo_A 13 NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELPASQQSGHSVYNPSATG-KEL----------------------- 66 (323)
T ss_dssp GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHTTSCCBCHHHHC-EEE-----------------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCchhccCCCCCCcccCC-ccc-----------------------
Confidence 355799999999 9999999999999999999888 56788999999988 543
Q ss_pred CCCCceEEecCCCCceeeeEEEEEEEeCCccccceEEeEeeccccCCCCCCCCccccccccCCCcch-------------
Q 043762 142 NSLCHATLSYADASSSEGNLASDQFFIGSSEISGLVFGCMDSVFSSSSDEDGKNTGLMGMNRGSLSF------------- 208 (443)
Q Consensus 142 ~~~c~~~i~Y~~g~~~~G~~~~D~v~i~~~~~~~~~fg~a~~~~~~~~~~~~~~~GIlGLg~~~~s~------------- 208 (443)
+.|.|.+.|++|+.+.|.+++|+|++++.+++++.|||++.+.+. .......+||||||++..+.
T Consensus 67 -~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~~~-~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l 144 (323)
T 1bxo_A 67 -SGYTWSISYGDGSSASGNVFTDSVTVGGVTAHGQAVQAAQQISAQ-FQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTV 144 (323)
T ss_dssp -EEEEEEEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHH-HHTCTTCSEEEECSCGGGCCCBSSCCCCHHHHH
T ss_pred -CCCeEEEEeCCCCeEEEEEEEEEEEECCEEECcEEEEEEEecCcc-cccCCCCceEEEeCcccccccccCCCCCHHHHH
Confidence 235799999999779999999999999999999999999986431 11224789999999976553
Q ss_pred hhhcccCeEEEEecCCCCceeEEeCCCCCC-CCCCceeeeecccCCCCCCCCCeeEEEEEceEEecCeecCCCCCccccC
Q 043762 209 VSQMGFPKFSYCISGADFSGLLLLGDADLP-WLLPLNYTPLIQMTTPLPYFDRVAYTVQLEGIKVLDKLLPIPRSVFVPD 287 (443)
Q Consensus 209 ~~ql~~~~Fs~~L~~~~~~G~l~fGg~d~~-~~g~l~~~p~~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~ 287 (443)
.+|+.+++||+||.+ +..|.|+|||+|++ |.|++.|+|+... ..+|.|++++|+|++ ..
T Consensus 145 ~~~i~~~~FS~~L~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~--------~~~w~v~l~~i~v~~-~~---------- 204 (323)
T 1bxo_A 145 KSSLAQPLFAVALKH-QQPGVYDFGFIDSSKYTGSLTYTGVDNS--------QGFWSFNVDSYTAGS-QS---------- 204 (323)
T ss_dssp GGGBSSSEEEEECCS-SSCEEEEESSCCGGGBSSCCEEEECBCT--------TSSCEEEEEEEEETT-EE----------
T ss_pred HHhcCCcEEEEEEeC-CCCceEEEeCcChhhccCceEEEECCCC--------CCeEEEEEeeEEECC-cc----------
Confidence 245667999999986 36899999999975 9999999999753 268999999999998 21
Q ss_pred CCCCCcEEEcccCccccccHHHHHHHHHHHHHHhhhhhhhccCccccccCCcccceecCCCCCCCCCCCeEEEEEeCcEE
Q 043762 288 HTGAGQTMVDSGTQFTFLLGPAYAALRTEFLNQTASILKVLEDQNFVFQGAMDLCYRVPQNQSRLPQLPAVSLVFRGAEM 367 (443)
Q Consensus 288 ~~~~~~ailDTGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~p~i~~~f~g~~~ 367 (443)
..+..+||||||+++++|++++++|.+++ .+.... ... .-|.++|. ..+|+|+|+|+|.++
T Consensus 205 -~~~~~aiiDSGTs~~~lP~~~~~~l~~~i----~~a~~~-~~~---------g~~~~~C~----~~~P~i~f~fgg~~~ 265 (323)
T 1bxo_A 205 -GDGFSGIADTGTTLLLLDDSVVSQYYSQV----SGAQQD-SNA---------GGYVFDCS----TNLPDFSVSISGYTA 265 (323)
T ss_dssp -EEEEEEEECTTCSSEEECHHHHHHHHTTS----TTCEEE-TTT---------TEEEECTT----CCCCCEEEEETTEEE
T ss_pred -CCCceEEEeCCCCceeCCHHHHHHHHHhC----CCceEc-CcC---------CEEEEECC----CCCceEEEEECCEEE
Confidence 23457999999999999999998866554 221111 011 12344553 578999999999999
Q ss_pred EEcCCceeEecCCcccCCCceEEEE-EEcCCCCCCCceeecccceeeeEEEEeCCCCEEEEEcCC
Q 043762 368 SVSGDRLLYRAPGEVRGIDSVYCFT-FGNSDLLGVEAYVIGHHHQQNVWMEFDLERSRIGMAQVR 431 (443)
Q Consensus 368 ~i~~~~~i~~~~~~~~~~~~~~C~~-i~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~riGfa~~~ 431 (443)
+||+++|+++. ..+...|++ |+... ..+.||||++|||++|+|||++++|||||+++
T Consensus 266 ~l~~~~~~~~~-----~~~~~~C~~~i~~~~--~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1bxo_A 266 TVPGSLINYGP-----SGDGSTCLGGIQSNS--GIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQA 323 (323)
T ss_dssp EECHHHHEEEE-----CSSSSCEEESEEECT--TCSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred EECHHHeEEec-----cCCCCeEEEEEECCC--CCCcEEEChHHHcCEEEEEECCCCEEEEecCC
Confidence 99999999874 123357987 77654 23569999999999999999999999999974
No 33
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=4e-51 Score=400.15 Aligned_cols=298 Identities=17% Similarity=0.268 Sum_probs=230.9
Q ss_pred eEEEEEEEeCCCCceEEEEEeCCCCeeEEeCCCCCCCCCCCCCCCCCCCcCccCCCCcccCCCCCCCCCCCCCCCCCCCc
Q 043762 67 VSLTVSLTVGTPPQNVSMVLDTGSELSWLHCNNTRYSYPNAFDPNLSSSYKPVTCSSPTCVNRTRDFTIPVSCDNNSLCH 146 (443)
Q Consensus 67 ~~y~~~i~vGtP~Q~~~l~lDTGSs~~wv~c~~c~~~~~~~y~p~~Sst~~~~~c~~~~c~~~~~~~~~~~~c~~~~~c~ 146 (443)
..|+++|+||||+|+++|+|||||+++||+|. +.|+|++|+++. .|.
T Consensus 12 ~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-------~~y~~s~Ss~~~--------------------------~~~ 58 (340)
T 1wkr_A 12 VDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD-------KSYVKTSTSSAT--------------------------SDK 58 (340)
T ss_dssp SCEEEEEEETTTTEEEEEEEETTCCCCEECSS-------SCCCCCTTCEEE--------------------------EEE
T ss_pred cEEEEEEEECCCCcEEEEEEeCCChhheecCC-------CccCCcCCcccc--------------------------Cce
Confidence 46999999999999999999999999999975 479998887542 256
Q ss_pred eEEecCCCCceeeeEEEEEEEeCCccccceEEeEeeccccCCCCCCCCccccccccCCCcch--------------hhh-
Q 043762 147 ATLSYADASSSEGNLASDQFFIGSSEISGLVFGCMDSVFSSSSDEDGKNTGLMGMNRGSLSF--------------VSQ- 211 (443)
Q Consensus 147 ~~i~Y~~g~~~~G~~~~D~v~i~~~~~~~~~fg~a~~~~~~~~~~~~~~~GIlGLg~~~~s~--------------~~q- 211 (443)
|.+.|++| ++.|.+++|+|++++.+++++.|||++...+ + ..++||||||++..++ +++
T Consensus 59 ~~i~Yg~G-s~~G~~~~Dtv~~g~~~v~~~~fg~~~~~~~---~--~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~~~l 132 (340)
T 1wkr_A 59 VSVTYGSG-SFSGTEYTDTVTLGSLTIPKQSIGVASRDSG---F--DGVDGILGVGPVDLTVGTLSPHTSTSIPTVTDNL 132 (340)
T ss_dssp EEEECSSC-EEEEEEEEEEEEETTEEEEEEEEEEEEEEES---C--TTCSEEEECSCGGGGTTSEESCTTCCCCCHHHHH
T ss_pred EEEEECCc-EEEEEEEEEEEEECCEEEcceEEEEEEccCC---C--cCCCcEEECCccccccccccccccccCCCHHHHH
Confidence 99999999 4999999999999999999999999998642 1 3689999999977654 222
Q ss_pred -----cccCeEEEEecCC----CCceeEEeCCCCCC-CCCCceeeeecccCCCCCCCCCeeEEEEEceEEecC-eecCCC
Q 043762 212 -----MGFPKFSYCISGA----DFSGLLLLGDADLP-WLLPLNYTPLIQMTTPLPYFDRVAYTVQLEGIKVLD-KLLPIP 280 (443)
Q Consensus 212 -----l~~~~Fs~~L~~~----~~~G~l~fGg~d~~-~~g~l~~~p~~~~~~~~~~~~~~~w~v~l~~i~v~~-~~~~~~ 280 (443)
+.+++||+||.+. ...|.|+|||+|++ |.|++.|+|+..... ...+|.|. ++|+|++ +.+..
T Consensus 133 ~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~-----~~~~w~v~-~~i~v~~~~~l~~- 205 (340)
T 1wkr_A 133 FSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSP-----ASAYWGIN-QSIRYGSSTSILS- 205 (340)
T ss_dssp HHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTT-----GGGSSEEE-EEEEETTTEEEEE-
T ss_pred HHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCC-----CcceEEEE-eeEEECCCeEccC-
Confidence 3458999999863 25799999999965 999999999987421 12789999 9999998 76531
Q ss_pred CCccccCCCCCCcEEEcccCccccccHHHHHHHHHHHHHHhhhhhhhccCccccccCCcccceecCCCCCCCCCCCeEEE
Q 043762 281 RSVFVPDHTGAGQTMVDSGTQFTFLLGPAYAALRTEFLNQTASILKVLEDQNFVFQGAMDLCYRVPQNQSRLPQLPAVSL 360 (443)
Q Consensus 281 ~~~~~~~~~~~~~ailDTGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~p~i~~ 360 (443)
+..++|||||++++||.+++++|.+++.++.. .... .+..+|... ..+|+|+|
T Consensus 206 ----------~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~------~~~g----~~~~~C~~~-------~~~p~i~f 258 (340)
T 1wkr_A 206 ----------STAGIVDTGTTLTLIASDAFAKYKKATGAVAD------NNTG----LLRLTTAQY-------ANLQSLFF 258 (340)
T ss_dssp ----------EEEEEECTTBCSEEECHHHHHHHHHHHTCEEC------TTTS----SEEECHHHH-------HTCCCEEE
T ss_pred ----------CCeEEEeCCcccccCCHHHHHHHHHhhCCEEc------CCCC----eEEeecccc-------ccCCcEEE
Confidence 23699999999999999999997666522111 0110 123455443 57899999
Q ss_pred EEeCcEEEEcCCceeEecCCcc-cCCCceEEE-EEEcCCCC--CCCceeecccceeeeEEEEeCCCCEEEEEcCCCCchh
Q 043762 361 VFRGAEMSVSGDRLLYRAPGEV-RGIDSVYCF-TFGNSDLL--GVEAYVIGHHHQQNVWMEFDLERSRIGMAQVRCDLAG 436 (443)
Q Consensus 361 ~f~g~~~~i~~~~~i~~~~~~~-~~~~~~~C~-~i~~~~~~--~~~~~iLG~~fl~~~y~vfD~~~~riGfa~~~c~~~~ 436 (443)
+|+|.+++|+|++|+++..... .+.....|+ ++...... ....||||++|||++|+|||++++|||||+++|+..+
T Consensus 259 ~f~g~~~~i~~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~~ 338 (340)
T 1wkr_A 259 TIGGQTFELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTSFTTAT 338 (340)
T ss_dssp EETTEEEEECTGGGBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECTTTTCC
T ss_pred EECCEEEEEcHHHhccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecCCCCCC
Confidence 9999999999999997641100 011123575 46653221 1246999999999999999999999999999998754
Q ss_pred h
Q 043762 437 Q 437 (443)
Q Consensus 437 ~ 437 (443)
.
T Consensus 339 ~ 339 (340)
T 1wkr_A 339 S 339 (340)
T ss_dssp C
T ss_pred C
Confidence 3
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=1.8e-42 Score=321.42 Aligned_cols=216 Identities=19% Similarity=0.278 Sum_probs=184.7
Q ss_pred CCCCCccceEEEEEEEeCCCCceEEEEEeCCCCeeEEeCCCC----CCCCCCCCCCCCCCCcCccCCCCcccCCCCCCCC
Q 043762 59 NKLPFHHNVSLTVSLTVGTPPQNVSMVLDTGSELSWLHCNNT----RYSYPNAFDPNLSSSYKPVTCSSPTCVNRTRDFT 134 (443)
Q Consensus 59 ~~l~~~~~~~y~~~i~vGtP~Q~~~l~lDTGSs~~wv~c~~c----~~~~~~~y~p~~Sst~~~~~c~~~~c~~~~~~~~ 134 (443)
++|.++.+..|+++|+||||+|+++|+|||||+++||+|..| .|..++.|+|++|+|++...
T Consensus 5 ~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~-------------- 70 (239)
T 1b5f_A 5 VALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRAHSMYESSDSSTYKENG-------------- 70 (239)
T ss_dssp EEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHTSCCBCGGGCTTCEEEE--------------
T ss_pred eeeeecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCCCCCCCCccCCCeeeCC--------------
Confidence 456677788899999999999999999999999999999988 37778999999999998754
Q ss_pred CCCCCCCCCCCceEEecCCCCceeeeEEEEEEEeCCccccceEEeEeeccccCCCCCCCCccccccccCCCcc------h
Q 043762 135 IPVSCDNNSLCHATLSYADASSSEGNLASDQFFIGSSEISGLVFGCMDSVFSSSSDEDGKNTGLMGMNRGSLS------F 208 (443)
Q Consensus 135 ~~~~c~~~~~c~~~i~Y~~g~~~~G~~~~D~v~i~~~~~~~~~fg~a~~~~~~~~~~~~~~~GIlGLg~~~~s------~ 208 (443)
|.|.+.|++| ++.|.+++|+|++++.+++++.||++..+.+ ..+....++||||||++..+ +
T Consensus 71 ----------~~~~i~Yg~G-s~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~-~~f~~~~~~GilGLg~~~~s~p~~~~l 138 (239)
T 1b5f_A 71 ----------TFGAIIYGTG-SITGFFSQDSVTIGDLVVKEQDFIEATDEAD-NVFLHRLFDGILGLSFQTISVPVWYNM 138 (239)
T ss_dssp ----------EEEEEECSSC-EEEEEEEEEEEEETTEEEEEEEEEEEEEECH-HHHTTCSCCEEEECSCCSSSCCHHHHH
T ss_pred ----------cEEEEEECCC-cEEEEEEEEEEEECCcEEccEEEEEEEeccC-ccccccCcceEEecCccccccHHHHHH
Confidence 4689999999 5899999999999999999999999987543 12334578999999998876 4
Q ss_pred hhh--cccCeEEEEecCC---CCceeEEeCCCCCC-CCCCceeeeecccCCCCCCCCCeeEEEEEceEEecCeecCCCCC
Q 043762 209 VSQ--MGFPKFSYCISGA---DFSGLLLLGDADLP-WLLPLNYTPLIQMTTPLPYFDRVAYTVQLEGIKVLDKLLPIPRS 282 (443)
Q Consensus 209 ~~q--l~~~~Fs~~L~~~---~~~G~l~fGg~d~~-~~g~l~~~p~~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~ 282 (443)
++| +..++||+||.+. ...|.|+|||+|++ |.|++.|+|+... .+|.|.+++|+|+++.+.+.
T Consensus 139 ~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---------~~~~v~l~~i~v~~~~~~~~-- 207 (239)
T 1b5f_A 139 LNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTYQ---------YYWQFGIGDVLIGDKSTGFC-- 207 (239)
T ss_dssp HHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEEEE---------TTEEEEECCEEETTEECCTT--
T ss_pred HHCCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEcccC---------CeEEEEeeEEEECCEEeccc--
Confidence 444 4569999999874 36899999999965 9999999999875 68999999999999987542
Q ss_pred ccccCCCCCCcEEEcccCccccccHHHHHHHHHHH
Q 043762 283 VFVPDHTGAGQTMVDSGTQFTFLLGPAYAALRTEF 317 (443)
Q Consensus 283 ~~~~~~~~~~~ailDTGt~~~~lp~~~~~~l~~~~ 317 (443)
..+..++|||||+++++|.+++++|.+++
T Consensus 208 ------~~~~~aiiDTGTt~~~lP~~~~~~i~~~i 236 (239)
T 1b5f_A 208 ------APGCQAFADSGTSLLSGPTAIVTQINHAI 236 (239)
T ss_dssp ------TTCEEEEECTTCSSEEECHHHHHHHHHHT
T ss_pred ------CCCCEEEEecCcchhhCCHHHHHHHHHHh
Confidence 23467999999999999999999987765
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=1.5e-36 Score=282.39 Aligned_cols=222 Identities=21% Similarity=0.324 Sum_probs=173.8
Q ss_pred CCccccceEEeEeeccccCCCCCCCCccccccccCCCcch----------hhh--cccCeEEEEecCCC---CceeEEeC
Q 043762 169 GSSEISGLVFGCMDSVFSSSSDEDGKNTGLMGMNRGSLSF----------VSQ--MGFPKFSYCISGAD---FSGLLLLG 233 (443)
Q Consensus 169 ~~~~~~~~~fg~a~~~~~~~~~~~~~~~GIlGLg~~~~s~----------~~q--l~~~~Fs~~L~~~~---~~G~l~fG 233 (443)
|+.+++++.|||++.+.+. .+.....+||||||++..+. .+| +..++||+||++.+ ..|.|+||
T Consensus 1 gg~~v~~~~Fg~~~~~~~~-~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fG 79 (241)
T 1lya_B 1 GGVKVERQVFGEATKQPGI-TFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLG 79 (241)
T ss_dssp CCEEEEEEEEEEEEECCSS-TTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEET
T ss_pred CCeEECCeEEEEEEEccCC-ccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEEC
Confidence 4567899999999987542 34556899999999987653 233 45699999998763 28999999
Q ss_pred CCCCC-CCCCceeeeecccCCCCCCCCCeeEEEEEceEEecCeecCCCCCccccCCCCCCcEEEcccCccccccHHHHHH
Q 043762 234 DADLP-WLLPLNYTPLIQMTTPLPYFDRVAYTVQLEGIKVLDKLLPIPRSVFVPDHTGAGQTMVDSGTQFTFLLGPAYAA 312 (443)
Q Consensus 234 g~d~~-~~g~l~~~p~~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~ailDTGt~~~~lp~~~~~~ 312 (443)
|+|++ |.|++.|+|+... .+|.|.+++|+|+++.+. +..+..+++||||+++++|.+++++
T Consensus 80 g~d~~~~~g~l~~~p~~~~---------~~~~v~l~~i~v~~~~~~---------~~~~~~aiiDSGTt~~~lP~~~~~~ 141 (241)
T 1lya_B 80 GTDSKYYKGSLSYLNVTRK---------AYWQVHLDQVEVASGLTL---------CKEGCEAIVDTGTSLMVGPVDEVRE 141 (241)
T ss_dssp SCCGGGEEEEEEEEECSSB---------TTBEEEEEEEEETTSCEE---------STTCEEEEECTTCSSEEECHHHHHH
T ss_pred CcCHHHcCCceEEEECccc---------cEEEEEEeEEEECCeeEe---------ccCCCEEEEECCCccccCCHHHHHH
Confidence 99975 9999999999864 689999999999987642 2345679999999999999999999
Q ss_pred HHHHHHHHhhhhhhhccCccccccCCcccceecCCCCCCCCCCCeEEEEEeCcEEEEcCCceeEecCCcccCCCceEEEE
Q 043762 313 LRTEFLNQTASILKVLEDQNFVFQGAMDLCYRVPQNQSRLPQLPAVSLVFRGAEMSVSGDRLLYRAPGEVRGIDSVYCFT 392 (443)
Q Consensus 313 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~p~i~~~f~g~~~~i~~~~~i~~~~~~~~~~~~~~C~~ 392 (443)
|.+++.+. . . .... +..+|+.. ..+|+|+|+|+|.+++|++++|+++.. ..++..|+.
T Consensus 142 l~~~~~~~----~-~-~~g~-----~~~~C~~~-------~~~p~i~f~f~g~~~~l~~~~y~~~~~----~~~~~~C~~ 199 (241)
T 1lya_B 142 LQKAIGAV----P-L-IQGE-----YMIPCEKV-------STLPAITLKLGGKGYKLSPEDYTLKVS----QAGKTLCLS 199 (241)
T ss_dssp HHHHHTCE----E-E-ETTE-----EEEEGGGG-------GGSCCEEEEETTEEEEECTTTSEEEET----TTTSSEEEE
T ss_pred HHHHhCCe----e-c-cCCc-----EEEECCCC-------ccCCeEEEEECCEEEEECHHHhEEEcc----CCCCCeeEE
Confidence 87766221 1 0 1111 24466654 679999999999999999999999841 122458985
Q ss_pred -EEcCCCC--CCCceeecccceeeeEEEEeCCCCEEEEEcCC
Q 043762 393 -FGNSDLL--GVEAYVIGHHHQQNVWMEFDLERSRIGMAQVR 431 (443)
Q Consensus 393 -i~~~~~~--~~~~~iLG~~fl~~~y~vfD~~~~riGfa~~~ 431 (443)
|+..+.. ..+.||||++|||++|+|||++++|||||+++
T Consensus 200 ~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~ 241 (241)
T 1lya_B 200 GFMGMDIPPPSGPLWILGDVFIGRYYTVFDRDNNRVGFAEAA 241 (241)
T ss_dssp SEEECCCCTTTCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEecccCCCCCCeEEechHHhcceEEEEECCCCEEEEEEcC
Confidence 8765421 23579999999999999999999999999975
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.86 E-value=1.1e-22 Score=159.97 Aligned_cols=86 Identities=23% Similarity=0.346 Sum_probs=76.7
Q ss_pred CCCCccceEEEEEEEeCCCCceEEEEEeCCCCeeEEeCCCC-----CCCCCCCCCCCCCCCcCccCCCCcccCCCCCCCC
Q 043762 60 KLPFHHNVSLTVSLTVGTPPQNVSMVLDTGSELSWLHCNNT-----RYSYPNAFDPNLSSSYKPVTCSSPTCVNRTRDFT 134 (443)
Q Consensus 60 ~l~~~~~~~y~~~i~vGtP~Q~~~l~lDTGSs~~wv~c~~c-----~~~~~~~y~p~~Sst~~~~~c~~~~c~~~~~~~~ 134 (443)
+|.++.+..|+++|.||||+|++.|+|||||+++||+|..| .|..++.|+|++|+|++...
T Consensus 6 ~l~n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~~~~y~p~~SsT~~~~~-------------- 71 (97)
T 1lya_A 6 VLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVKNG-------------- 71 (97)
T ss_dssp EEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHTSCCBCGGGCTTCEEEE--------------
T ss_pred eeEECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCCCCCCCchhCCCceeCC--------------
Confidence 45556677899999999999999999999999999999988 36678999999999998754
Q ss_pred CCCCCCCCCCCceEEecCCCCceeeeEEEEEEEeCC
Q 043762 135 IPVSCDNNSLCHATLSYADASSSEGNLASDQFFIGS 170 (443)
Q Consensus 135 ~~~~c~~~~~c~~~i~Y~~g~~~~G~~~~D~v~i~~ 170 (443)
|.|.|.|++|+ +.|.++.|+|+|++
T Consensus 72 ----------~~~~i~Yg~Gs-~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 72 ----------TSFDIHYGSGS-LSGYLSQDTVSVPC 96 (97)
T ss_dssp ----------EEEEEECSSCE-EEEEEEEEEEEESC
T ss_pred ----------CcEEEEECCcE-EEEEEEEEEEEECC
Confidence 56999999995 99999999999986
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.67 E-value=6e-17 Score=124.96 Aligned_cols=82 Identities=17% Similarity=0.351 Sum_probs=65.9
Q ss_pred cccceecCCCCCCCCCCCeEEEEEeCcEEEEcCCceeEecCCcccCCCceEEEE-EEcCCC-CCCCceeecccceeeeEE
Q 043762 339 MDLCYRVPQNQSRLPQLPAVSLVFRGAEMSVSGDRLLYRAPGEVRGIDSVYCFT-FGNSDL-LGVEAYVIGHHHQQNVWM 416 (443)
Q Consensus 339 ~~~C~~~~~~~~~~~~~p~i~~~f~g~~~~i~~~~~i~~~~~~~~~~~~~~C~~-i~~~~~-~~~~~~iLG~~fl~~~y~ 416 (443)
..+|... +++|+|+|+|+|.+++|+|++|+.+.. ......|++ |+..+. ...+.||||++|||++|+
T Consensus 4 ~v~C~~~-------~~~P~i~f~~gg~~~~l~~~~yi~~~~----~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~ 72 (87)
T 1b5f_B 4 QVDCNTL-------SSMPNVSFTIGGKKFGLTPEQYILKVG----KGEATQCISGFTAMDATLLGPLWILGDVFMRPYHT 72 (87)
T ss_dssp EECGGGG-------GGCCCEEEEETTEEEEECHHHHEEEES----CTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEE
T ss_pred EEECCCC-------CcCCcEEEEECCEEEEECHHHhEEEcc----CCCCCEEEEEEEECCCCCCCCeEEechHHhccEEE
Confidence 4566554 679999999999999999999999841 122458985 876542 123579999999999999
Q ss_pred EEeCCCCEEEEEcCC
Q 043762 417 EFDLERSRIGMAQVR 431 (443)
Q Consensus 417 vfD~~~~riGfa~~~ 431 (443)
|||++++|||||+++
T Consensus 73 vfD~~~~riGfA~~~ 87 (87)
T 1b5f_B 73 VFDYGNLLVGFAEAA 87 (87)
T ss_dssp EEETTTTEEEEEEEC
T ss_pred EEECCCCEEEEEEcC
Confidence 999999999999974
No 38
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=94.78 E-value=0.022 Score=47.39 Aligned_cols=29 Identities=17% Similarity=0.297 Sum_probs=25.7
Q ss_pred ceEEEEEEEeCCCCceEEEEEeCCCCeeEEe
Q 043762 66 NVSLTVSLTVGTPPQNVSMVLDTGSELSWLH 96 (443)
Q Consensus 66 ~~~y~~~i~vGtP~Q~~~l~lDTGSs~~wv~ 96 (443)
...+++++.|+ +++++++||||++.+.+.
T Consensus 24 ~~~~~v~v~In--G~~~~~LvDTGAs~s~is 52 (148)
T 2i1a_A 24 VPMLYINIEIN--NYPVKAFVDTGAQTTIMS 52 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEE
T ss_pred cceEEEEEEEC--CEEEEEEEECCCCccccC
Confidence 44588999999 999999999999999885
No 39
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=91.99 E-value=0.31 Score=40.24 Aligned_cols=27 Identities=19% Similarity=0.245 Sum_probs=24.6
Q ss_pred ceeecccceeeeEEEEeCCCCEEEEEc
Q 043762 403 AYVIGHHHQQNVWMEFDLERSRIGMAQ 429 (443)
Q Consensus 403 ~~iLG~~fl~~~y~vfD~~~~riGfa~ 429 (443)
..|||..||+++-+..|+.+++|-|..
T Consensus 109 d~iLG~d~L~~~~~~ID~~~~~l~l~~ 135 (148)
T 2i1a_A 109 DVLIGLDMLKRHLACVDLKENVLRIAE 135 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEEETT
T ss_pred CeEecHHHHhhCCEEEECCCCEEEEcc
Confidence 379999999999999999999999864
No 40
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=88.00 E-value=1 Score=37.19 Aligned_cols=28 Identities=11% Similarity=0.212 Sum_probs=25.3
Q ss_pred ceeecccceeeeEEEEeCCCCEEEEEcC
Q 043762 403 AYVIGHHHQQNVWMEFDLERSRIGMAQV 430 (443)
Q Consensus 403 ~~iLG~~fl~~~y~vfD~~~~riGfa~~ 430 (443)
..|||..||+.+=.+.|++++++-|.+.
T Consensus 108 d~LLGmD~L~~~~~~ID~~~~~L~l~~~ 135 (148)
T 3s8i_A 108 DMLLGLDMLRRHQCSIDLKKNVLVIGTT 135 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEECTTT
T ss_pred CeeccHHHHHhCCEEEEcCCCEEEEccC
Confidence 4899999999999999999999998764
No 41
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=85.87 E-value=0.77 Score=35.41 Aligned_cols=25 Identities=28% Similarity=0.438 Sum_probs=23.5
Q ss_pred EEEEEeCCCCceEEEEEeCCCCeeEEe
Q 043762 70 TVSLTVGTPPQNVSMVLDTGSELSWLH 96 (443)
Q Consensus 70 ~~~i~vGtP~Q~~~l~lDTGSs~~wv~ 96 (443)
.+.+.|| +|.+.+++|||.++|-+.
T Consensus 10 ~v~v~I~--Gq~~e~LLDTGAD~TVl~ 34 (104)
T 1fmb_A 10 TTIVLIN--DTPLNVLLDTGADTSVLT 34 (104)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEE
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEc
Confidence 6889999 999999999999999986
No 42
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=85.37 E-value=0.89 Score=34.65 Aligned_cols=25 Identities=28% Similarity=0.460 Sum_probs=23.5
Q ss_pred EEEEEeCCCCceEEEEEeCCCCeeEEe
Q 043762 70 TVSLTVGTPPQNVSMVLDTGSELSWLH 96 (443)
Q Consensus 70 ~~~i~vGtP~Q~~~l~lDTGSs~~wv~ 96 (443)
.+.+.|| +|.+.+++|||.++|-+.
T Consensus 10 ~vtvkI~--Gq~~eaLLDTGAD~TVl~ 34 (99)
T 2hs1_A 10 LVTIKIG--GQLKEALLDTGADDTIIE 34 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSEEES
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEe
Confidence 5889999 999999999999999996
No 43
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=81.37 E-value=1.5 Score=33.33 Aligned_cols=25 Identities=32% Similarity=0.405 Sum_probs=23.4
Q ss_pred EEEEEeCCCCceEEEEEeCCCCeeEEe
Q 043762 70 TVSLTVGTPPQNVSMVLDTGSELSWLH 96 (443)
Q Consensus 70 ~~~i~vGtP~Q~~~l~lDTGSs~~wv~ 96 (443)
++.+.|| +|.+.+++|||.+++-+.
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~ 34 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVA 34 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEES
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEc
Confidence 6889999 999999999999999995
No 44
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=77.56 E-value=1.9 Score=35.58 Aligned_cols=27 Identities=15% Similarity=0.367 Sum_probs=25.0
Q ss_pred EEEEEEEeCCCCceEEEEEeCCCCeeEEe
Q 043762 68 SLTVSLTVGTPPQNVSMVLDTGSELSWLH 96 (443)
Q Consensus 68 ~y~~~i~vGtP~Q~~~l~lDTGSs~~wv~ 96 (443)
.|++++.|+ +++++++||||++.+.+.
T Consensus 24 ~l~v~~~In--g~~v~~LVDTGAs~s~Is 50 (148)
T 3s8i_A 24 MLYINCKVN--GHPLKAFVDSGAQMTIMS 50 (148)
T ss_dssp CCEEEEEET--TEEEEEEECTTCSSCEEE
T ss_pred EEEEEEEEC--CEEEEEEEeCCCCcEeeC
Confidence 478999999 999999999999999985
No 45
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=76.60 E-value=2.3 Score=33.32 Aligned_cols=24 Identities=25% Similarity=0.508 Sum_probs=22.2
Q ss_pred EEEEEeCCCCceEEEEEeCCCCeeEEe
Q 043762 70 TVSLTVGTPPQNVSMVLDTGSELSWLH 96 (443)
Q Consensus 70 ~~~i~vGtP~Q~~~l~lDTGSs~~wv~ 96 (443)
.+ +.|| +|.+.+++|||.++|-+.
T Consensus 16 ~v-ikI~--Gq~~eaLLDTGAD~TVi~ 39 (116)
T 2hah_A 16 IL-IFVN--GYPIKFLLDTGADITVLN 39 (116)
T ss_dssp EE-EEET--TEEEEEEECTTCSSCEEE
T ss_pred EE-EEEC--CEEEEEEecCCCCcEEEc
Confidence 45 9999 999999999999999986
No 46
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=72.64 E-value=3.5 Score=32.01 Aligned_cols=27 Identities=22% Similarity=0.555 Sum_probs=23.2
Q ss_pred EEEEEeC---CCCceEEEEEeCCCCeeEEe
Q 043762 70 TVSLTVG---TPPQNVSMVLDTGSELSWLH 96 (443)
Q Consensus 70 ~~~i~vG---tP~Q~~~l~lDTGSs~~wv~ 96 (443)
.+.+.|| +|+|.+..++|||-++|.+.
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~ 41 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIP 41 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEE
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEe
Confidence 4666666 78999999999999999986
No 47
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=69.93 E-value=4.8 Score=31.37 Aligned_cols=25 Identities=12% Similarity=0.381 Sum_probs=23.3
Q ss_pred EEEEEeCCCCceEEEEEeCCCCeeEEe
Q 043762 70 TVSLTVGTPPQNVSMVLDTGSELSWLH 96 (443)
Q Consensus 70 ~~~i~vGtP~Q~~~l~lDTGSs~~wv~ 96 (443)
.+.+.|| +|.+.++||||-+++-+.
T Consensus 11 ~vti~I~--Gq~~eaLLDTGADdTVi~ 35 (114)
T 3sqf_A 11 SLTLWLD--DKMFTGLINTGADVTIIK 35 (114)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEE
T ss_pred eEEEEEC--CEEEEEEEccCCCceEEe
Confidence 6789999 999999999999999986
No 48
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=66.47 E-value=5.9 Score=31.39 Aligned_cols=21 Identities=14% Similarity=0.373 Sum_probs=18.8
Q ss_pred eCCCCceEEEEEeCCCCeeEEeC
Q 043762 75 VGTPPQNVSMVLDTGSELSWLHC 97 (443)
Q Consensus 75 vGtP~Q~~~l~lDTGSs~~wv~c 97 (443)
|| +|.+.+++|||-+++.+.-
T Consensus 27 i~--gq~~eaLLDTGAD~TVl~~ 47 (124)
T 2rsp_A 27 QR--SVYITALLDSGADITIISE 47 (124)
T ss_dssp CS--EEEEEEEECTTCSSCEEET
T ss_pred CC--CEEEEEEecCCCCcEEEec
Confidence 77 8889999999999999973
No 49
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=64.83 E-value=6.3 Score=31.63 Aligned_cols=26 Identities=38% Similarity=0.571 Sum_probs=23.9
Q ss_pred EEEEEEeCCCCceEEEEEeCCCCeeEEe
Q 043762 69 LTVSLTVGTPPQNVSMVLDTGSELSWLH 96 (443)
Q Consensus 69 y~~~i~vGtP~Q~~~l~lDTGSs~~wv~ 96 (443)
-++.+.|+ +|.+.++||||.+++.+.
T Consensus 23 P~v~i~I~--G~~~~~LlDTGAd~tVl~ 48 (132)
T 3slz_A 23 PRITLKVG--GQPVTFLVDTGAQHSVLT 48 (132)
T ss_dssp SEEEEEET--TEEEEEEECTTCSSCEEC
T ss_pred CEEEEEEC--CEEEEEEEeCCCCeEEEc
Confidence 36889999 999999999999999996
No 50
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=58.23 E-value=8.7 Score=33.21 Aligned_cols=25 Identities=28% Similarity=0.445 Sum_probs=23.6
Q ss_pred EEEEEeCCCCceEEEEEeCCCCeeEEe
Q 043762 70 TVSLTVGTPPQNVSMVLDTGSELSWLH 96 (443)
Q Consensus 70 ~~~i~vGtP~Q~~~l~lDTGSs~~wv~ 96 (443)
.+.+.|| +|.+.+++|||-+++-+.
T Consensus 10 ~vtv~I~--Gq~~e~LLDTGAD~TVl~ 34 (203)
T 3ka2_A 10 LVTIRIG--GQLKEALLDTGADDTVIE 34 (203)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEC
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEe
Confidence 6889999 999999999999999996
No 51
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=32.79 E-value=39 Score=29.13 Aligned_cols=25 Identities=28% Similarity=0.445 Sum_probs=23.3
Q ss_pred EEEEEeCCCCceEEEEEeCCCCeeEEe
Q 043762 70 TVSLTVGTPPQNVSMVLDTGSELSWLH 96 (443)
Q Consensus 70 ~~~i~vGtP~Q~~~l~lDTGSs~~wv~ 96 (443)
.+.+.|| +|.+.+++|||-+++-+.
T Consensus 114 ~~~iki~--Gq~~e~LlDTGAD~TVl~ 138 (203)
T 3ka2_A 114 LVTIRIG--GQLKEALLDTGADDTVIE 138 (203)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEC
T ss_pred cEEEEEC--CEEEeeeecccCCceeee
Confidence 6889999 999999999999999985
No 52
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=26.71 E-value=44 Score=30.82 Aligned_cols=30 Identities=13% Similarity=0.246 Sum_probs=22.3
Q ss_pred eeEEEEEceEEecCeecCCCCCccccCCCCCCcEEEcccCccccccHH
Q 043762 261 VAYTVQLEGIKVLDKLLPIPRSVFVPDHTGAGQTMVDSGTQFTFLLGP 308 (443)
Q Consensus 261 ~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~ailDTGt~~~~lp~~ 308 (443)
..|.+ .|.||.+.+ .++||||++.+++|..
T Consensus 15 ~~Y~~---~i~iG~Q~~---------------~v~~DTGSs~lWv~~~ 44 (323)
T 1bxo_A 15 EEYIT---PVTIGGTTL---------------NLNFDTGSADLWVFST 44 (323)
T ss_dssp SCEEE---EEEETTEEE---------------EEEEETTCCCEEECBT
T ss_pred CEEEE---EEEECCEEE---------------EEEEeCCCcceEEecC
Confidence 45665 467775544 4899999999999865
No 53
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=26.50 E-value=26 Score=27.26 Aligned_cols=30 Identities=20% Similarity=0.213 Sum_probs=23.6
Q ss_pred eEEEEEceEEecCeecCCCCCccccCCCCCCcEEEcccCccccccH
Q 043762 262 AYTVQLEGIKVLDKLLPIPRSVFVPDHTGAGQTMVDSGTQFTFLLG 307 (443)
Q Consensus 262 ~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~ailDTGt~~~~lp~ 307 (443)
.|+=.+- ++++|+.+ .+++|||+-.+.+..
T Consensus 11 l~~rP~v-ikI~Gq~~---------------eaLLDTGAD~TVi~~ 40 (116)
T 2hah_A 11 EKRPEIL-IFVNGYPI---------------KFLLDTGADITVLNR 40 (116)
T ss_dssp SSCCEEE-EEETTEEE---------------EEEECTTCSSCEEEG
T ss_pred ccCCCEE-EEECCEEE---------------EEEecCCCCcEEEcc
Confidence 3555566 99999976 389999999888874
No 54
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=26.40 E-value=42 Score=31.05 Aligned_cols=16 Identities=13% Similarity=0.260 Sum_probs=14.3
Q ss_pred cEEEcccCccccccHH
Q 043762 293 QTMVDSGTQFTFLLGP 308 (443)
Q Consensus 293 ~ailDTGt~~~~lp~~ 308 (443)
.++||||++.+++|..
T Consensus 28 ~v~~DTGSs~lWv~~~ 43 (325)
T 1ibq_A 28 HLDFDTGSADLWVFSD 43 (325)
T ss_dssp EEEEETTCCCEEEECT
T ss_pred EEEEeCCCccceEeeC
Confidence 4899999999999875
No 55
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=25.64 E-value=37 Score=27.05 Aligned_cols=25 Identities=28% Similarity=0.367 Sum_probs=19.8
Q ss_pred eEEecCeecCCCCCccccCCCCCCcEEEcccCccccccHH
Q 043762 269 GIKVLDKLLPIPRSVFVPDHTGAGQTMVDSGTQFTFLLGP 308 (443)
Q Consensus 269 ~i~v~~~~~~~~~~~~~~~~~~~~~ailDTGt~~~~lp~~ 308 (443)
.++++|+.+ .+++|||...+.|...
T Consensus 26 ~i~I~G~~~---------------~~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 26 TLKVGGQPV---------------TFLVDTGAQHSVLTQN 50 (132)
T ss_dssp EEEETTEEE---------------EEEECTTCSSCEECSC
T ss_pred EEEECCEEE---------------EEEEeCCCCeEEEccc
Confidence 477788765 3899999999988753
No 56
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=25.34 E-value=23 Score=26.75 Aligned_cols=29 Identities=7% Similarity=0.189 Sum_probs=21.9
Q ss_pred EEEEEceEEecCeecCCCCCccccCCCCCCcEEEcccCcccccc
Q 043762 263 YTVQLEGIKVLDKLLPIPRSVFVPDHTGAGQTMVDSGTQFTFLL 306 (443)
Q Consensus 263 w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~ailDTGt~~~~lp 306 (443)
|+=.+-.++++|+.+. +++|||+..+.+.
T Consensus 6 ~~RP~vti~I~Gq~~e---------------~LLDTGAD~TVl~ 34 (99)
T 3ec0_A 6 WKRPVVTAYIEGQPVE---------------VLLDTGADDSIVA 34 (99)
T ss_dssp SSCCEEEEEETTEEEE---------------EEECTTCSSCEES
T ss_pred ccCCeEEEEECCEEEE---------------EEEecCCCceEEc
Confidence 4444556888998763 8999999988773
No 57
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=24.22 E-value=53 Score=30.28 Aligned_cols=16 Identities=13% Similarity=0.237 Sum_probs=14.3
Q ss_pred cEEEcccCccccccHH
Q 043762 293 QTMVDSGTQFTFLLGP 308 (443)
Q Consensus 293 ~ailDTGt~~~~lp~~ 308 (443)
.++||||++.+++|..
T Consensus 29 ~v~~DTGSs~lWv~~~ 44 (323)
T 1izd_A 29 GLDFDTGSADLWVFSS 44 (323)
T ss_dssp EEEEETTCCCEEECBT
T ss_pred EEEEcCCCcceEEecC
Confidence 4899999999999975
No 58
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=21.88 E-value=79 Score=29.55 Aligned_cols=44 Identities=11% Similarity=0.154 Sum_probs=29.2
Q ss_pred CCCceeeeecccCCCCCCCCCeeEEEEEceEEec--CeecCCCCCccccCCCCCCcEEEcccCccccccHH
Q 043762 240 LLPLNYTPLIQMTTPLPYFDRVAYTVQLEGIKVL--DKLLPIPRSVFVPDHTGAGQTMVDSGTQFTFLLGP 308 (443)
Q Consensus 240 ~g~l~~~p~~~~~~~~~~~~~~~w~v~l~~i~v~--~~~~~~~~~~~~~~~~~~~~ailDTGt~~~~lp~~ 308 (443)
+|.....|+....+ ..|.+ .|.|| .+.+ .++||||++.+++|..
T Consensus 4 ~g~~~~~~l~~~~~-------~~Y~~---~i~iGtP~q~~---------------~v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 4 DGSVDTPGLYDFDL-------EEYAI---PVSIGTPGQDF---------------YLLFDTGSSDTWVPHK 49 (361)
T ss_dssp -CCEEEEEEEETTT-------TEEEE---EEEETTTTEEE---------------EEEEETTCCCCEEEBT
T ss_pred CCccceEEeecCCC-------CEEEE---EEEECCCCcEE---------------EEEEcCCCCCeEECCC
Confidence 45666777776321 45666 46777 3333 4899999999999864
Done!