BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043767
(105 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M9W1|RL222_ARATH 60S ribosomal protein L22-2 OS=Arabidopsis thaliana GN=RPL22B
PE=2 SV=1
Length = 124
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/81 (77%), Positives = 72/81 (88%), Gaps = 4/81 (4%)
Query: 10 MSRGSGGAAGGGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDT 69
MSRG GAA AKGKKKG +FTIDC+KPV+DKIM+IASLEKFLQERIKVGGKAGALGD+
Sbjct: 1 MSRG--GAAV--AKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDS 56
Query: 70 VTVTRDKTKITVLSDSNFSKR 90
VT+TR+K+KITV +D FSKR
Sbjct: 57 VTITREKSKITVTADGQFSKR 77
>sp|Q9FE58|RL223_ARATH 60S ribosomal protein L22-3 OS=Arabidopsis thaliana GN=RPL22C
PE=2 SV=1
Length = 124
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/62 (77%), Positives = 58/62 (93%)
Query: 29 ATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDTVTVTRDKTKITVLSDSNFS 88
+FTIDC+KPV+DKIM+IASLEKFLQERIKVGGKAGALGD+V++TR+K+KITV +D FS
Sbjct: 16 VSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVSITREKSKITVTADGQFS 75
Query: 89 KR 90
KR
Sbjct: 76 KR 77
>sp|Q9SRX7|RL221_ARATH Putative 60S ribosomal protein L22-1 OS=Arabidopsis thaliana
GN=RPL22A PE=3 SV=1
Length = 127
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 61/75 (81%)
Query: 16 GAAGGGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDTVTVTRD 75
GA GA KKKG +F IDC+KPV+D I++IA+LEKFLQERIKV GKAGALG++V++TR
Sbjct: 5 GAKSSGAGAKKKGVSFVIDCSKPVDDTILEIATLEKFLQERIKVRGKAGALGNSVSITRY 64
Query: 76 KTKITVLSDSNFSKR 90
KI V ++SNFSKR
Sbjct: 65 NGKINVNANSNFSKR 79
>sp|P47198|RL22_RAT 60S ribosomal protein L22 OS=Rattus norvegicus GN=Rpl22 PE=2 SV=2
Length = 128
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 21 GAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGAL-GDTVTVTRDKTKI 79
G K KK+ FT+DC PVED IMD A+ E+FLQERIKV GKAG L G VT+ R K+KI
Sbjct: 11 GGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKI 70
Query: 80 TVLSDSNFSKR 90
TV S+ FSKR
Sbjct: 71 TVTSEEPFSKR 81
>sp|P67985|RL22_PIG 60S ribosomal protein L22 OS=Sus scrofa GN=RPL22 PE=2 SV=2
Length = 128
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 21 GAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGAL-GDTVTVTRDKTKI 79
G K KK+ FT+DC PVED IMD A+ E+FLQERIKV GKAG L G VT+ R K+KI
Sbjct: 11 GGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKI 70
Query: 80 TVLSDSNFSKR 90
TV S+ FSKR
Sbjct: 71 TVTSEVPFSKR 81
>sp|P67984|RL22_MOUSE 60S ribosomal protein L22 OS=Mus musculus GN=Rpl22 PE=2 SV=2
Length = 128
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 21 GAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGAL-GDTVTVTRDKTKI 79
G K KK+ FT+DC PVED IMD A+ E+FLQERIKV GKAG L G VT+ R K+KI
Sbjct: 11 GGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKI 70
Query: 80 TVLSDSNFSKR 90
TV S+ FSKR
Sbjct: 71 TVTSEVPFSKR 81
>sp|Q4R5I3|RL22_MACFA 60S ribosomal protein L22 OS=Macaca fascicularis GN=RPL22 PE=2
SV=3
Length = 128
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 21 GAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGAL-GDTVTVTRDKTKI 79
G K KK+ FT+DC PVED IMD A+ E+FLQERIKV GKAG L G VT+ R K+KI
Sbjct: 11 GGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKI 70
Query: 80 TVLSDSNFSKR 90
TV S+ FSKR
Sbjct: 71 TVTSEVPFSKR 81
>sp|P35268|RL22_HUMAN 60S ribosomal protein L22 OS=Homo sapiens GN=RPL22 PE=1 SV=2
Length = 128
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 31 FTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGAL-GDTVTVTRDKTKITVLSDSNFSK 89
FT+DC PVED IMD A+ E+FLQERIKV GKAG L G VT+ R K+KITV S+ FSK
Sbjct: 21 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSK 80
Query: 90 R 90
R
Sbjct: 81 R 81
>sp|Q90YU6|RL22_ICTPU 60S ribosomal protein L22 OS=Ictalurus punctatus GN=rpl22 PE=2
SV=3
Length = 128
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 31 FTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGAL-GDTVTVTRDKTKITVLSDSNFSK 89
FT+DC PVED IMD A+ E+FLQERIKV GKAG L G V++ R K+KITV SD FSK
Sbjct: 21 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVSIERSKSKITVTSDIPFSK 80
Query: 90 R 90
R
Sbjct: 81 R 81
>sp|Q98TF8|RL22_CHICK 60S ribosomal protein L22 OS=Gallus gallus GN=RPL22 PE=2 SV=1
Length = 128
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 31 FTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGAL-GDTVTVTRDKTKITVLSDSNFSK 89
FT+DC PVED IMD A+ E+FLQERIKV GKAG L G VT+ R K+KITV S+ FSK
Sbjct: 21 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSK 80
Query: 90 R 90
R
Sbjct: 81 R 81
>sp|Q28IL6|RL22_XENTR 60S ribosomal protein L22 OS=Xenopus tropicalis GN=rpl22 PE=2
SV=3
Length = 128
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 21 GAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGAL-GDTVTVTRDKTKI 79
G+K KK+ FT+DC PVED IMD A+ E+FL +RIKV GK G L G V++ R K+KI
Sbjct: 11 GSKKKKQLLKFTLDCTHPVEDGIMDAANFEQFLHDRIKVNGKVGNLGGGVVSIERSKSKI 70
Query: 80 TVLSDSNFSKR 90
TV S+ FSKR
Sbjct: 71 TVSSEVPFSKR 81
>sp|P50886|RL22_XENLA 60S ribosomal protein L22 OS=Xenopus laevis GN=rpl22 PE=2 SV=2
Length = 128
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 21 GAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGAL-GDTVTVTRDKTKI 79
G+K KK+ FT+DC PVED IMD A+ E+FL +RIKV GK G L G V++ R K+KI
Sbjct: 11 GSKKKKQLLKFTLDCTHPVEDGIMDAANFEQFLHDRIKVNGKVGNLGGGVVSIERSKSKI 70
Query: 80 TVLSDSNFSKR 90
TV S+ FSKR
Sbjct: 71 TVSSEVPFSKR 81
>sp|P52865|RL22_GADMO 60S ribosomal protein L22 (Fragment) OS=Gadus morhua GN=rpl22
PE=2 SV=2
Length = 125
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 31 FTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGD-TVTVTRDKTKITVLSDSNFSK 89
FT+DC PVED IMD A+ E+FLQERIKV GK+G LG+ V++ R +KI+V S+ FSK
Sbjct: 18 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKSGNLGNGVVSIERXXSKISVNSEVPFSK 77
Query: 90 R 90
R
Sbjct: 78 R 78
>sp|P13732|RL22_TRIGR 60S ribosomal protein L22 OS=Tripneustes gratilla GN=RPL22 PE=2
SV=1
Length = 130
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 42/60 (70%)
Query: 31 FTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDTVTVTRDKTKITVLSDSNFSKR 90
FTIDC PVED IMD ++ E+FLQERIKV GK L + + R K+K+TV S+ FSKR
Sbjct: 25 FTIDCTLPVEDGIMDASNFEQFLQERIKVNGKTKNLTTNIVIERKKSKVTVTSEIAFSKR 84
>sp|Q5I0R6|RL22L_XENTR 60S ribosomal protein L22-like 1 OS=Xenopus tropicalis GN=rpl22l1
PE=2 SV=1
Length = 120
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 46/73 (63%)
Query: 18 AGGGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDTVTVTRDKT 77
A K KK +FT+D PVED I D + E+FL+ERIKV GK G LG V + R K+
Sbjct: 2 APSKDKKPKKAWSFTLDLTHPVEDGIFDSVNFEQFLKERIKVNGKTGNLGSIVHIGRLKS 61
Query: 78 KITVLSDSNFSKR 90
KITV S+ FSKR
Sbjct: 62 KITVSSEKKFSKR 74
>sp|P50887|RL22_DROME 60S ribosomal protein L22 OS=Drosophila melanogaster GN=RpL22 PE=1
SV=2
Length = 299
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 44/71 (61%)
Query: 19 GGGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDTVTVTRDKTK 78
G G K KK FTIDC ED IMD+A EK+++ R+KV GK LG+ VT R K K
Sbjct: 181 GKGQKKKKVSLRFTIDCTNIAEDSIMDVADFEKYIKARLKVNGKVNNLGNNVTFERSKLK 240
Query: 79 ITVLSDSNFSK 89
+ V SD +FSK
Sbjct: 241 LIVSSDVHFSK 251
>sp|Q54JE3|RL221_DICDI 60S ribosomal protein L22 1 OS=Dictyostelium discoideum GN=rpl22
PE=3 SV=1
Length = 116
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 3/77 (3%)
Query: 26 KKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDTVTVTRDKTKITVLSDS 85
KK F IDC P KI+D+A+ EK+L +RIKV K G LG TV +++DK+KI + +
Sbjct: 10 KKSHKFVIDCTAPA-GKIVDVAAFEKYLHDRIKVDNKVGNLGSTVVISKDKSKIIINTTI 68
Query: 86 NFSKRYL--LLKRLLKL 100
FSKRYL L K+ LK
Sbjct: 69 PFSKRYLKYLTKKFLKF 85
>sp|Q6P5R6|RL22L_HUMAN 60S ribosomal protein L22-like 1 OS=Homo sapiens GN=RPL22L1 PE=1
SV=2
Length = 122
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 45/74 (60%)
Query: 17 AAGGGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDTVTVTRDK 76
A K K+ F +D PVED I D + E+FL+E++KV GK G LG+ V + R K
Sbjct: 2 APQKDRKPKRSTWRFNLDLTHPVEDGIFDSGNFEQFLREKVKVNGKTGNLGNVVHIERFK 61
Query: 77 TKITVLSDSNFSKR 90
KITV+S+ FSKR
Sbjct: 62 NKITVVSEKQFSKR 75
>sp|Q9D7S7|RL22L_MOUSE 60S ribosomal protein L22-like 1 OS=Mus musculus GN=Rpl22l1 PE=1
SV=1
Length = 122
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 45/74 (60%)
Query: 17 AAGGGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDTVTVTRDK 76
A K KK F +D PVED I D + E+FL+E++KV GK G LG+ V + R K
Sbjct: 2 APQKDKKPKKSTWRFHLDLTHPVEDGIFDSGNFEQFLREKVKVNGKTGNLGNVVHIERLK 61
Query: 77 TKITVLSDSNFSKR 90
KITV+S+ FSKR
Sbjct: 62 NKITVVSEKQFSKR 75
>sp|P52819|RL22_CAEEL 60S ribosomal protein L22 OS=Caenorhabditis elegans GN=rpl-22
PE=1 SV=3
Length = 130
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Query: 10 MSRGSGGAAGGGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGAL-GD 68
+ + +A + KK F ++C PVED I+ I LE FL E+IKV GK G L +
Sbjct: 2 VPKPHAKSAKKALRKKKVHLKFNVECKNPVEDGILRIEDLEAFLNEKIKVNGKTGHLAAN 61
Query: 69 TVTVTRDKTKITVLSDSNFSKRYL--LLKRLLK 99
V V K+K++V+S+ FSKRYL L K+ LK
Sbjct: 62 NVKVEVAKSKVSVVSEVPFSKRYLKYLTKKYLK 94
>sp|Q54GK6|RL222_DICDI 60S ribosomal protein L22 2 OS=Dictyostelium discoideum GN=rpl22a
PE=3 SV=1
Length = 116
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Query: 26 KKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDTVTVTRDKTKITVLSDS 85
KK F IDC P KI+D+A+ EK+L +RIKV K LG V +++DK+KI + +
Sbjct: 10 KKSHKFVIDCTAPA-GKIVDVAAFEKYLHDRIKVDNKVSNLGSNVVISKDKSKIIINTTI 68
Query: 86 NFSKRYL--LLKRLLKL 100
FSKRYL L K+ LK
Sbjct: 69 PFSKRYLKYLTKKFLKF 85
>sp|Q23BV5|RL22_TETTS 60S ribosomal protein L22 OS=Tetrahymena thermophila (strain
SB210) GN=RPL22 PE=1 SV=3
Length = 118
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 44/66 (66%)
Query: 25 KKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDTVTVTRDKTKITVLSD 84
KK F IDC++PVEDK++ I +FL+ +IKVGGK G LG+ +T++ D KI V S
Sbjct: 11 KKVNLGFKIDCSQPVEDKVILIGEFAEFLKSKIKVGGKLGNLGENITISNDDKKINVQST 70
Query: 85 SNFSKR 90
FSKR
Sbjct: 71 IPFSKR 76
>sp|Q09668|RL22_SCHPO 60S ribosomal protein L22 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl22 PE=1 SV=3
Length = 117
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 23 KGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDTVTVTRD-KTKITV 81
K K + ID V DKI D+A+ EK+L +RIKV GK G LG +V V+R+ +KI V
Sbjct: 4 KNTKVSNKYIIDATAAVNDKIFDVAAFEKYLIDRIKVDGKTGNLGSSVVVSREGSSKIAV 63
Query: 82 LSDSNFSKRYL--LLKRLLK 99
++ +FS RYL L K+ LK
Sbjct: 64 IAHIDFSGRYLKYLTKKFLK 83
>sp|A4FUH0|RL22L_BOVIN 60S ribosomal protein L22-like 1 OS=Bos taurus GN=RPL22L1 PE=2
SV=1
Length = 122
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 39/60 (65%)
Query: 31 FTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDTVTVTRDKTKITVLSDSNFSKR 90
F +D VED I D + E+FL+E++KV GK G LG+ V + R K KI V+S+ FSKR
Sbjct: 16 FNLDLTHAVEDGIFDSGNFEQFLREKVKVNGKTGNLGNVVHIERFKNKIIVVSEKQFSKR 75
>sp|P05749|RL22A_YEAST 60S ribosomal protein L22-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL22A PE=1 SV=3
Length = 121
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%)
Query: 18 AGGGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDTVTVTRDKT 77
A ++ +K TFT+D + P E+ + D AS K+L + IKV G G LG+ VTVT D T
Sbjct: 2 APNTSRKQKIAKTFTVDVSSPTENGVFDPASYAKYLIDHIKVEGAVGNLGNAVTVTEDGT 61
Query: 78 KITVLSDSNFS 88
+TV+S + FS
Sbjct: 62 VVTVVSTAKFS 72
>sp|P56628|RL22B_YEAST 60S ribosomal protein L22-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL22B PE=1 SV=2
Length = 122
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%)
Query: 18 AGGGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDTVTVTRDKT 77
A ++ +K T T+D + P E+ + D AS K+L + IKV G G LG+ + VT D +
Sbjct: 2 APNTSRKQKVIKTLTVDVSSPTENGVFDPASYSKYLIDHIKVDGAVGNLGNAIEVTEDGS 61
Query: 78 KITVLSDSNFS 88
+TV+S + FS
Sbjct: 62 IVTVVSSAKFS 72
>sp|Q8SS49|RL22_ENCCU 60S ribosomal protein L22 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPL22 PE=1 SV=1
Length = 112
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 31 FTIDCAKPVEDKIMDIASLEKFLQERIK 58
FTIDC KP D ++ + L FLQ++IK
Sbjct: 12 FTIDCTKPASDSLISPSDLGAFLQQKIK 39
>sp|Q9GT49|TRYS_TRYCC Trypanothione synthetase OS=Trypanosoma cruzi (strain CL Brener)
GN=TRS PE=1 SV=1
Length = 647
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 64 GALGDTVTVTRDKTKITVLSDSNFSKRYLLLKRLLKLP 101
G +G VTVT I SD +FS R ++ + L +LP
Sbjct: 540 GRVGRNVTVTEASGDIAAKSDGDFSDRDMVYQELFRLP 577
>sp|Q9VJC7|EFTS_DROME Elongation factor Ts, mitochondrial OS=Drosophila melanogaster
GN=CG6412 PE=2 SV=1
Length = 318
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Query: 8 RTMSRGSGGAAGG-----GAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGG- 61
R + GSGG+ G A KK G TF +C K +E D+ EK+L E+ + G
Sbjct: 15 RQLYAGSGGSGGLEKSALAALRKKTGYTFA-NCKKALEKHNNDVGLAEKWLHEQAQTLGW 73
Query: 62 -KAGALGDTVT 71
KA + D T
Sbjct: 74 SKATKVADRAT 84
>sp|P19201|YOR2_COYMV Uncharacterized 15 kDa protein OS=Commelina yellow mottle virus
PE=4 SV=1
Length = 135
Score = 29.3 bits (64), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
Query: 13 GSGGAAGGGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDTVTV 72
G GGA G G K TI + +I D+ S K L+ER++ KA T V
Sbjct: 26 GIGGATDVGLTGVTKQLNTTIYLVAKITQQIEDLQSTIKRLEERVQSLEKA----KTPVV 81
Query: 73 TRDKTK--ITVLSDSNFS 88
T+D I+ LSD S
Sbjct: 82 TQDPNPEIISKLSDIQIS 99
>sp|A4YJ26|GGGPS_METS5 Geranylgeranylglyceryl phosphate synthase OS=Metallosphaera
sedula (strain ATCC 51363 / DSM 5348) GN=Msed_2291 PE=3
SV=1
Length = 252
Score = 28.9 bits (63), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 33 IDCAKPVE------DKIMDIASLEKFLQERIKVGGKAGALGDTVTVTRDK--TKITVLSD 84
ID +P+ DK+ DI SL K K G A +G T+ V+++K + ++VL D
Sbjct: 15 IDEGQPIHFSLIDPDKVKDIQSLSKVASSLFKAGTSAFLIGGTLGVSKEKLDSILSVLQD 74
Query: 85 SNFSK 89
+ K
Sbjct: 75 FSVPK 79
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.132 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,911,514
Number of Sequences: 539616
Number of extensions: 1345013
Number of successful extensions: 6095
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 6049
Number of HSP's gapped (non-prelim): 60
length of query: 105
length of database: 191,569,459
effective HSP length: 74
effective length of query: 31
effective length of database: 151,637,875
effective search space: 4700774125
effective search space used: 4700774125
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)