BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043768
(98 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 30 MFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDGFLADKEIDELVKY 89
+F R D NGDG++S EL DA LG+ P +R + D +GDGF++ DE +
Sbjct: 16 IFKRFDTNGDGKISSSELGDALKTLGSVTPD-EVRRMMAEIDTDGDGFIS---FDEFTDF 71
Query: 90 A 90
A
Sbjct: 72 A 72
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 21 PYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDGFLAD 80
P K + + +F R D NGDG++S EL +A LG+ P K + D +GDGF++
Sbjct: 5 PQDKAERERIFKRFDANGDGKISAAELGEALKTLGSITPD-EVKHMMAEIDTDGDGFISF 63
Query: 81 KE 82
+E
Sbjct: 64 QE 65
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 25 EQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDGFLADKEID 84
+ ++ +F R D NGDG++S EL DA LG+ +R + D +GDGF+ + +
Sbjct: 3 DDMERIFKRFDTNGDGKISLSELTDALRTLGS-TSADEVQRMMAEIDTDGDGFI---DFN 58
Query: 85 ELVKYA 90
E + +
Sbjct: 59 EFISFC 64
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 25 EQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDGFLADKEID 84
+ ++ +F R D NGDG++S EL DA LG+ +R + D +GDGF+ + +
Sbjct: 2 DDMERIFKRFDTNGDGKISLSELTDALRTLGS-TSADEVQRMMAEIDTDGDGFI---DFN 57
Query: 85 ELVKYA 90
E + +
Sbjct: 58 EFISFC 63
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 13 VTPRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADD 72
+ R+ ++E+LK F DK+G+G +S EL + LG + +R AD
Sbjct: 71 LMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV 130
Query: 73 NGDG 76
+GDG
Sbjct: 131 DGDG 134
Score = 29.6 bits (65), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +G+G + S +EL++AF G+ +
Sbjct: 44 TEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAA 103
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 104 ELRHVMTNLGEKLTDEEVDEMIREA 128
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 13 VTPRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADD 72
+ R+ ++E+LK F DK+G+G +S EL + LG + +R AD
Sbjct: 68 LMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV 127
Query: 73 NGDG 76
+GDG
Sbjct: 128 DGDG 131
Score = 29.6 bits (65), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +G+G + S +EL++AF G+ +
Sbjct: 41 TEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAA 100
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 101 ELRHVMTNLGEKLTDEEVDEMIREA 125
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 13 VTPRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADD 72
+ R+ ++E+LK F DK+G+G +S EL + LG + +R AD
Sbjct: 71 LMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV 130
Query: 73 NGDG 76
+GDG
Sbjct: 131 DGDG 134
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 13 VTPRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLG 55
+ + S TKE L +F DKNGDG+L RQEL D +S L
Sbjct: 52 MASKLTSQEETKE-LTDIFRHIDKNGDGQLDRQELIDGYSKLS 93
Score = 29.3 bits (64), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 12 VVTPRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYAD 71
V R S+ +K++L+ F + D++G+G++S EL F W K + D
Sbjct: 131 TVAMDRKSL-LSKDKLESAFQKFDQDGNGKISVDELASVFGLDHLESKTW--KEMISGID 187
Query: 72 DNGDGFLADKEIDELVK 88
N DG D + +E K
Sbjct: 188 SNNDG---DVDFEEFCK 201
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 35.4 bits (80), Expect = 0.008, Method: Composition-based stats.
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 25 EQLKGMFWRCDKNGDGRLSRQELEDAFSYL 54
++L +F DKNGDG+L RQEL D +S L
Sbjct: 346 KELTDIFRHIDKNGDGQLDRQELIDGYSKL 375
Score = 29.6 bits (65), Expect = 0.45, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDGFLADKE 82
+K++L+ F + D++G+G++S EL F W K + D N DG D +
Sbjct: 424 SKDKLESAFQKFDQDGNGKISVDELASVFGLDHLESKTW--KEMISGIDSNNDG---DVD 478
Query: 83 IDELVK 88
+E K
Sbjct: 479 FEEFCK 484
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 35.0 bits (79), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%)
Query: 12 VVTPRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYAD 71
+ R+ ++E+++ F DK+G+G +S EL + LG + + +R AD
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREAD 130
Query: 72 DNGDG 76
+GDG
Sbjct: 131 IDGDG 135
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +G+G + S +E+ +AF G+ +
Sbjct: 45 TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 104
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+D++++ A
Sbjct: 105 ELRHVMTNLGEKLTDEEVDQMIREA 129
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 12 VVTPRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYAD 71
+ R+ ++E+++ F DK+G+G +S EL + LG + +R AD
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREAD 130
Query: 72 DNGDG 76
+GDG
Sbjct: 131 IDGDG 135
Score = 28.9 bits (63), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +G+G + S +E+ +AF G+ +
Sbjct: 45 TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 104
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 105 ELRHVMTNLGEXLTDEEVDEMIREA 129
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 12 VVTPRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYAD 71
+ R+ ++E+++ F DK+G+G +S EL + LG + +R AD
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREAD 129
Query: 72 DNGDG 76
+GDG
Sbjct: 130 IDGDG 134
Score = 28.9 bits (63), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +G+G + S +E+ +AF G+ +
Sbjct: 44 TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 103
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 104 ELRHVMTNLGEXLTDEEVDEMIREA 128
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 27 LKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDGFLADKEIDEL 86
+KG+ CDKN DG+++ E + LG + A A D NG+G L+ +DEL
Sbjct: 104 VKGIVGMCDKNADGQINADEFAAWLTALG--MSKAEAAEAFNQVDTNGNGELS---LDEL 158
Query: 87 VKYAAQFGY 95
+ F +
Sbjct: 159 LTAVRDFHF 167
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 34.7 bits (78), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 12 VVTPRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYAD 71
+ R+ ++E+++ F DK+G+G +S EL + LG + +R AD
Sbjct: 69 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 128
Query: 72 DNGDG 76
+GDG
Sbjct: 129 IDGDG 133
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +G+G + S +E+ +AF G+ +
Sbjct: 43 TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 102
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 103 ELRHVMTNLGEKLTDEEVDEMIREA 127
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 34.7 bits (78), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
++E+++ F DK+G+G +S EL + LG + +R AD +GDG
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 135
Score = 28.5 bits (62), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +G+G + S +E+ +AF G+ +
Sbjct: 45 TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 104
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 105 ELRHVMTNLGEKLTDEEVDEMIREA 129
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 34.7 bits (78), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 12 VVTPRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYAD 71
+ R+ ++E+++ F DK+G+G +S EL + LG + +R AD
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 130
Query: 72 DNGDG 76
+GDG
Sbjct: 131 IDGDG 135
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +G+G + S +E+ +AF G+ +
Sbjct: 45 TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 104
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 105 ELRHVMTNLGEKLTDEEVDEMIREA 129
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 12 VVTPRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYAD 71
+ R+ ++E+++ F DK+G+G +S EL + LG + +R AD
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 130
Query: 72 DNGDG 76
+GDG
Sbjct: 131 IDGDG 135
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +G+G + S +E+ +AF G+ +
Sbjct: 45 TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 104
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 105 ELRHVMTNLGEKLTDEEVDEMIREA 129
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 12 VVTPRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYAD 71
+ R+ ++E+++ F DK+G+G +S EL + LG + +R AD
Sbjct: 67 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 126
Query: 72 DNGDG 76
+GDG
Sbjct: 127 IDGDG 131
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +G+G + S +E+ +AF G+ +
Sbjct: 41 TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 100
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 101 ELRHVMTNLGEKLTDEEVDEMIREA 125
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 12 VVTPRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYAD 71
+ R+ ++E+++ F DK+G+G +S EL + LG + +R AD
Sbjct: 74 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 133
Query: 72 DNGDG 76
+GDG
Sbjct: 134 IDGDG 138
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +G+G + S +E+ +AF G+ +
Sbjct: 48 TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 107
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 108 ELRHVMTNLGEKLTDEEVDEMIREA 132
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 12 VVTPRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYAD 71
+ R+ ++E+++ F DK+G+G +S EL + LG + +R AD
Sbjct: 76 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 135
Query: 72 DNGDG 76
+GDG
Sbjct: 136 IDGDG 140
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +G+G + S +E+ +AF G+ +
Sbjct: 50 TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 109
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 110 ELRHVMTNLGEKLTDEEVDEMIREA 134
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 12 VVTPRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYAD 71
+ R+ ++E+++ F DK+G+G +S EL + LG + +R AD
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 129
Query: 72 DNGDG 76
+GDG
Sbjct: 130 IDGDG 134
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +G+G + S +E+ +AF G+ +
Sbjct: 44 TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 103
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 104 ELRHVMTNLGEKLTDEEVDEMIREA 128
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 12 VVTPRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYAD 71
+ R+ ++E+++ F DK+G+G +S EL + LG + +R AD
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 129
Query: 72 DNGDG 76
+GDG
Sbjct: 130 IDGDG 134
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +G+G + S +E+ +AF G+ +
Sbjct: 44 TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAA 103
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 104 ELRHVMTNLGEKLTDEEVDEMIREA 128
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 12 VVTPRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYAD 71
+ R+ ++E+++ F DK+G+G +S EL + LG + +R AD
Sbjct: 68 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 127
Query: 72 DNGDG 76
+GDG
Sbjct: 128 IDGDG 132
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +G+G + S +E+ +AF G+ +
Sbjct: 42 TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 101
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 102 ELRHVMTNLGEKLTDEEVDEMIREA 126
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 12 VVTPRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYAD 71
+ R+ ++E+++ F DK+G+G +S EL + LG + +R AD
Sbjct: 68 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 127
Query: 72 DNGDG 76
+GDG
Sbjct: 128 IDGDG 132
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +G+G + S +E+ +AF G+ +
Sbjct: 42 TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 101
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 102 ELRHVMTNLGEKLTDEEVDEMIREA 126
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 12 VVTPRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYAD 71
+ R+ ++E+++ F DK+G+G +S EL + LG + +R AD
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 129
Query: 72 DNGDG 76
+GDG
Sbjct: 130 IDGDG 134
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +G+G + S +E+ +AF G+ +
Sbjct: 44 TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 103
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 104 ELRHVMTNLGEKLTDEEVDEMIREA 128
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 12 VVTPRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYAD 71
+ R+ ++E+++ F DK+G+G +S EL + LG + +R AD
Sbjct: 66 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 125
Query: 72 DNGDG 76
+GDG
Sbjct: 126 IDGDG 130
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +G+G + S +E+ +AF G+ +
Sbjct: 40 TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 99
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 100 ELRHVMTNLGEKLTDEEVDEMIREA 124
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 12 VVTPRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYAD 71
+ R+ ++E+++ F DK+G+G +S EL + LG + +R AD
Sbjct: 72 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 131
Query: 72 DNGDG 76
+GDG
Sbjct: 132 IDGDG 136
Score = 28.1 bits (61), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +G+G + S +E+ +AF G+ +
Sbjct: 46 TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 105
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 106 ELRHVMTNLGEKLTDEEVDEMIREA 130
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 12 VVTPRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYAD 71
+ R+ ++E+++ F DK+G+G +S EL + LG + +R AD
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 130
Query: 72 DNGDG 76
+GDG
Sbjct: 131 IDGDG 135
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +G+G + S +E+ +AF G+ +
Sbjct: 45 TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 104
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 105 ELRHVMTNLGEKLTDEEVDEMIREA 129
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 12 VVTPRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYAD 71
+ R+ ++E+++ F DK+G+G +S EL + LG + +R AD
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 129
Query: 72 DNGDG 76
+GDG
Sbjct: 130 IDGDG 134
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +G+G + S +E+ +AF G+ +
Sbjct: 44 TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAA 103
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 104 ELRHVMTNLGEKLTDEEVDEMIREA 128
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 12 VVTPRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYAD 71
+ R+ ++E+++ F DK+G+G +S EL + LG + +R AD
Sbjct: 68 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 127
Query: 72 DNGDG 76
+GDG
Sbjct: 128 IDGDG 132
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +G+G + S +E+ +AF G+ +
Sbjct: 42 TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 101
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 102 ELRHVMTNLGEKLTDEEVDEMIREA 126
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
++E+++ F DK+G+G +S EL + LG + +R AD +GDG
Sbjct: 3 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 56
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 12 VVTPRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYAD 71
+ R+ ++E+++ F DK+G+G +S EL + LG + +R AD
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 129
Query: 72 DNGDG 76
+GDG
Sbjct: 130 IDGDG 134
Score = 30.0 bits (66), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +GDG + S +E+ +AF G+ +
Sbjct: 44 TEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 103
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 104 ELRHVMTNLGEKLTDEEVDEMIREA 128
Score = 28.5 bits (62), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 23 TKEQL---KGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDGFL 78
T+EQ+ K F DK+GDG ++ +EL LG + + D +GDG +
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 63
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 12 VVTPRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYAD 71
+ R+ ++E+++ F DK+G+G +S EL + LG + +R AD
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 130
Query: 72 DNGDG 76
+GDG
Sbjct: 131 IDGDG 135
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +G+G + S +E+ +AF G+ +
Sbjct: 45 TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAA 104
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 105 ELRHVMTNLGEKLTDEEVDEMIREA 129
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 12 VVTPRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYAD 71
+ R+ ++E+++ F DK+G+G +S EL + LG + +R AD
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 130
Query: 72 DNGDG 76
+GDG
Sbjct: 131 IDGDG 135
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +G+G + S +E+ +AF G+ +
Sbjct: 45 TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAA 104
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 105 ELRHVMTNLGEKLTDEEVDEMIREA 129
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With
Pyrophosphate
Length = 67
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
++E+++ F DK+G+G +S EL + LG + +R AD +GDG
Sbjct: 3 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 56
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin
Carboxy-Terminal Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
++E+++ F DK+G+G +S EL + LG + +R AD +GDG
Sbjct: 6 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 59
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin And 1mm Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin
Length = 74
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
++E+++ F DK+G+G +S EL + LG + +R AD +GDG
Sbjct: 7 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 60
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
++E+++ F DK+G+G +S EL + LG + +R AD +GDG
Sbjct: 79 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 132
Score = 28.9 bits (63), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 15/83 (18%)
Query: 23 TKEQLKGMFWRCDKNGDGRL---------------SRQELEDAFSYLGAYIPGWRAKRAL 67
T+ +L+ M D +G+G + S +E+ +AF G+ + L
Sbjct: 44 TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDSEEEIREAFRVFDKDGNGFISAAEL 103
Query: 68 RYADDNGDGFLADKEIDELVKYA 90
R+ N L D+E+DE+++ A
Sbjct: 104 RHVMTNLGEKLTDEEVDEMIREA 126
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From
Calmodulin To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
++E+++ F DK+G+G +S EL + LG + +R AD +GDG
Sbjct: 4 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 57
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 34.3 bits (77), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 26 QLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWR-AKRALRYADDNGDG 76
+L+ F D NGDG +S EL +A L + G R + +R D NGDG
Sbjct: 8 ELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDG 59
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 26 QLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWR-AKRALRYADDNGDG 76
+L+ F D NGDG +S EL +A L + G R + +R D NGDG
Sbjct: 89 ELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDG 140
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 16 RRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGD 75
R+ ++E+++ F DK+G+G +S EL + LG + + +R AD +GD
Sbjct: 75 RKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGD 134
Query: 76 G 76
G
Sbjct: 135 G 135
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 26 QLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWR-AKRALRYADDNGDG 76
+L+ F D NGDG +S EL +A L + G R + +R D NGDG
Sbjct: 89 ELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDG 140
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
++E+++ F DK+G+G +S EL + LG + +R AD +GDG
Sbjct: 27 SEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 80
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal
Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal
Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe
Bound With Er Alpha Peptide
Length = 67
Score = 33.9 bits (76), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 24 KEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
+E+++ F DK+G+G +S EL + LG + +R AD +GDG
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 53
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 33.9 bits (76), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 26 QLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWR-AKRALRYADDNGDG 76
+L+ F D NGDG +S EL +A L + G R + +R D NGDG
Sbjct: 103 ELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDG 154
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 33.9 bits (76), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 24 KEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
+E+++ F DK+G+G +S EL + LG + +R AD +GDG
Sbjct: 82 EEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDG 134
Score = 26.2 bits (56), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 29/91 (31%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWR-------AKRALRYADDNGD 75
T+ +L+ M D++G+G + E +LG + + A R D +G+
Sbjct: 44 TEAELRDMMSEIDRDGNGTVDFPE------FLGMMARKMKDTDNEEEIREAFRVFDKDGN 97
Query: 76 GF----------------LADKEIDELVKYA 90
GF L+D+E+DE+++ A
Sbjct: 98 GFVSAAELRHVMTRLGEKLSDEEVDEMIRAA 128
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 33.9 bits (76), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 31/64 (48%)
Query: 13 VTPRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADD 72
+ R+ ++E+LK F DK+ +G +S EL + LG + +R AD
Sbjct: 72 LMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV 131
Query: 73 NGDG 76
+GDG
Sbjct: 132 DGDG 135
Score = 30.0 bits (66), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +G+G + S +EL++AF G+ +
Sbjct: 45 TEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAA 104
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 105 ELRHVMTNLGEKLTDEEVDEMIREA 129
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 33.9 bits (76), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 31/64 (48%)
Query: 13 VTPRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADD 72
+ R+ ++E+LK F DK+ +G +S EL + LG + +R AD
Sbjct: 72 LMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV 131
Query: 73 NGDG 76
+GDG
Sbjct: 132 DGDG 135
Score = 30.0 bits (66), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +G+G + S +EL++AF G+ +
Sbjct: 45 TEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAA 104
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 105 ELRHVMTNLGEKLTDEEVDEMIREA 129
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 33.9 bits (76), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
++E+LK F DK+ +G +S EL + LG + +R AD +GDG
Sbjct: 2 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDG 55
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 43 SRQELEDAFSYLGAYIPGWRAKRALRYADDNGDGFLADKEIDELVKYA 90
S +EL++AF G+ + LR+ N L D+E+DE+++ A
Sbjct: 2 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 49
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 33.9 bits (76), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 16 RRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGD 75
R+ ++E+++ F DK+G+G +S EL + LG + +R AD +GD
Sbjct: 74 RKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGD 133
Query: 76 G 76
G
Sbjct: 134 G 134
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 33.9 bits (76), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDGFL 78
T+E+++ F D++GDG +S EL LG + +R AD +GDG +
Sbjct: 81 TEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMI 136
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 33.5 bits (75), Expect = 0.029, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 33/65 (50%)
Query: 12 VVTPRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYAD 71
++ R+ ++E+++ F DK+G+G +S EL + LG + +R AD
Sbjct: 362 IMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 421
Query: 72 DNGDG 76
+GDG
Sbjct: 422 IDGDG 426
Score = 29.3 bits (64), Expect = 0.61, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +GDG + S +E+ +AF G+ +
Sbjct: 336 TEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 395
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 396 ELRHVMTNLGEKLTDEEVDEMIREA 420
Score = 26.2 bits (56), Expect = 4.7, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 23 TKEQL---KGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
T+EQ+ K F DK+GDG ++ +EL LG + + D +GDG
Sbjct: 297 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 353
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 33.5 bits (75), Expect = 0.029, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 16 RRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGD 75
R+ ++E+++ F DK+G+G +S EL + LG + +R AD +GD
Sbjct: 374 RKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGD 433
Query: 76 G 76
G
Sbjct: 434 G 434
Score = 29.3 bits (64), Expect = 0.63, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +GDG + S +E+ +AF G+ +
Sbjct: 344 TEAELQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAA 403
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 404 ELRHVMTNLGEKLTDEEVDEMIREA 428
Score = 26.6 bits (57), Expect = 4.0, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Query: 23 TKEQL---KGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDGFLA 79
T+EQ+ K F DK+GDG ++ +EL LG + + D +GDG +
Sbjct: 305 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTID 364
Query: 80 DKEIDELVKYAAQFGYTLS 98
E L A + YT S
Sbjct: 365 FPEF--LTMMARKMKYTDS 381
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 33.5 bits (75), Expect = 0.029, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 16 RRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGD 75
R+ ++E+++ F DK+G+G +S EL + LG + +R AD +GD
Sbjct: 374 RKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGD 433
Query: 76 G 76
G
Sbjct: 434 G 434
Score = 29.3 bits (64), Expect = 0.64, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +GDG + S +E+ +AF G+ +
Sbjct: 344 TEAELQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAA 403
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 404 ELRHVMTNLGEKLTDEEVDEMIREA 428
Score = 26.6 bits (57), Expect = 4.0, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Query: 23 TKEQL---KGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDGFLA 79
T+EQ+ K F DK+GDG ++ +EL LG + + D +GDG +
Sbjct: 305 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTID 364
Query: 80 DKEIDELVKYAAQFGYTLS 98
E L A + YT S
Sbjct: 365 FPEF--LTMMARKMKYTDS 381
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 33.5 bits (75), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 32/65 (49%)
Query: 12 VVTPRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYAD 71
+ R+ ++E+++ F DK+G+G +S EL + LG + +R +D
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESD 130
Query: 72 DNGDG 76
+GDG
Sbjct: 131 IDGDG 135
Score = 26.9 bits (58), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +G+G + S +E+ +AF G+ +
Sbjct: 45 TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAA 104
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ +
Sbjct: 105 ELRHVMTNLGEKLTDEEVDEMIRES 129
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin
Bound To The Iq Motif Of Nav1.2
Length = 73
Score = 33.5 bits (75), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDGFL 78
++E+L F D++G+G +S EL + LG + +R AD +GDG +
Sbjct: 6 SEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHI 61
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 33.5 bits (75), Expect = 0.031, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 16 RRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGD 75
R+ ++E+++ F DK+G+G +S EL + LG + +R AD +GD
Sbjct: 375 RKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGD 434
Query: 76 G 76
G
Sbjct: 435 G 435
Score = 27.3 bits (59), Expect = 2.4, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +G+G + S +E+ +AF G+ +
Sbjct: 345 TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAA 404
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 405 ELRHVMTNLGEKLTDEEVDEMIREA 429
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 33.5 bits (75), Expect = 0.031, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 16 RRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGD 75
R+ ++E+++ F DK+G+G +S EL + LG + +R AD +GD
Sbjct: 375 RKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGD 434
Query: 76 G 76
G
Sbjct: 435 G 435
Score = 28.9 bits (63), Expect = 0.68, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +GDG + S +E+ +AF G+ +
Sbjct: 345 TEAELQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAA 404
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 405 ELRHVMTNLGEKLTDEEVDEMIREA 429
Score = 26.6 bits (57), Expect = 4.3, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Query: 23 TKEQL---KGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDGFLA 79
T+EQ+ K F DK+GDG ++ +EL LG + + D +GDG +
Sbjct: 306 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTID 365
Query: 80 DKEIDELVKYAAQFGYTLS 98
E L A + YT S
Sbjct: 366 FPEF--LTMMARKMKYTDS 382
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 33.5 bits (75), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
++E+++ F DK+G+G +S EL + LG + +R AD +GDG
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDG 134
Score = 28.5 bits (62), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 33 RCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDGFLADKEIDELVKYA 90
RC K+ D S +E+ +AF G+ + LR+ N L D+E+DE ++ A
Sbjct: 74 RCXKDTD---SEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREA 128
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 33.5 bits (75), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 32/66 (48%)
Query: 13 VTPRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADD 72
+ R+ ++E+L F D++G+G +S EL + LG + +R AD
Sbjct: 71 LMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADI 130
Query: 73 NGDGFL 78
+GDG +
Sbjct: 131 DGDGHI 136
Score = 26.6 bits (57), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +G+G + S +EL +AF G +
Sbjct: 44 TEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAA 103
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D E+DE+++ A
Sbjct: 104 ELRHVMTNLGEKLTDDEVDEMIREA 128
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 33.5 bits (75), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 32/66 (48%)
Query: 13 VTPRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADD 72
+ R+ ++E+L F D++G+G +S EL + LG + +R AD
Sbjct: 71 LMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADI 130
Query: 73 NGDGFL 78
+GDG +
Sbjct: 131 DGDGHI 136
Score = 26.6 bits (57), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +G+G + S +EL +AF G +
Sbjct: 44 TEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAA 103
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D E+DE+++ A
Sbjct: 104 ELRHVMTNLGEKLTDDEVDEMIREA 128
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 33.1 bits (74), Expect = 0.037, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
++E+++ F DK+G+G +S EL + LG + +R AD +GDG
Sbjct: 348 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 401
Score = 27.3 bits (59), Expect = 2.1, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +G+G + S +E+ +AF G+ +
Sbjct: 311 TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 370
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 371 ELRHVMTNLGEKLTDEEVDEMIREA 395
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 33.1 bits (74), Expect = 0.037, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
++E+++ F DK+G+G +S EL + LG + +R AD +GDG
Sbjct: 348 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 401
Score = 27.3 bits (59), Expect = 2.1, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +G+G + S +E+ +AF G+ +
Sbjct: 311 TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 370
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 371 ELRHVMTNLGEKLTDEEVDEMIREA 395
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 33.1 bits (74), Expect = 0.040, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
++E+++ F DK+G+G +S EL + LG + +R AD +GDG
Sbjct: 383 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 436
Score = 27.3 bits (59), Expect = 2.4, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +G+G + S +E+ +AF G+ +
Sbjct: 346 TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 405
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 406 ELRHVMTNLGEKLTDEEVDEMIREA 430
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 33.1 bits (74), Expect = 0.040, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
++E+++ F DK+G+G +S EL + LG + +R AD +GDG
Sbjct: 382 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 435
Score = 27.3 bits (59), Expect = 2.4, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +G+G + S +E+ +AF G+ +
Sbjct: 345 TEAELQDMINEVDADGNGTIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAA 404
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 405 ELRHVMTNLGEKLTDEEVDEMIREA 429
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 33.1 bits (74), Expect = 0.040, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
++E+++ F DK+G+G +S EL + LG + +R AD +GDG
Sbjct: 382 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 435
Score = 27.3 bits (59), Expect = 2.4, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +G+G + S +E+ +AF G+ +
Sbjct: 345 TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 404
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 405 ELRHVMTNLGEKLTDEEVDEMIREA 429
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 33.1 bits (74), Expect = 0.041, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
++E+++ F DK+G+G +S EL + LG + +R AD +GDG
Sbjct: 382 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 435
Score = 27.3 bits (59), Expect = 2.4, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +G+G + S +E+ +AF G+ +
Sbjct: 345 TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 404
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 405 ELRHVMTNLGEKLTDEEVDEMIREA 429
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 33.1 bits (74), Expect = 0.041, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
++E+++ F DK+G+G +S EL + LG + +R AD +GDG
Sbjct: 345 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 398
Score = 27.3 bits (59), Expect = 2.4, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +G+G + S +E+ +AF G+ +
Sbjct: 308 TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 367
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 368 ELRHVMTNLGEKLTDEEVDEMIREA 392
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 33.1 bits (74), Expect = 0.042, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
++E+++ F DK+G+G +S EL + LG + +R AD +GDG
Sbjct: 381 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 434
Score = 28.9 bits (63), Expect = 0.68, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +GDG + S +E+ +AF G+ +
Sbjct: 344 TEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 403
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 404 ELRHVMTNLGEKLTDEEVDEMIREA 428
Score = 26.2 bits (56), Expect = 5.0, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 23 TKEQL---KGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
T+EQ+ K F DK+GDG ++ +EL LG + + D +GDG
Sbjct: 305 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 361
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 33.1 bits (74), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAY--IPGWRAKRA----LRYADDNGDG 76
K +L+ F + D NGDG ++ EL+ L AY + + K A ++ AD N DG
Sbjct: 5 VKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDG 64
Query: 77 FLADKE 82
++ +E
Sbjct: 65 KISKEE 70
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 32.7 bits (73), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
++E+++ F DK+G+G +S +L + LG + +R AD +GDG
Sbjct: 5 SEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDG 58
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 32.7 bits (73), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 32/65 (49%)
Query: 12 VVTPRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYAD 71
+ R+ ++E+++ F DK+G+G +S EL + LG + +R A+
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAN 129
Query: 72 DNGDG 76
+GDG
Sbjct: 130 IDGDG 134
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+ +L+ M D +G+G + S +E+ +AF G+ +
Sbjct: 44 TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 103
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 104 ELRHVMTNLGEKLTDEEVDEMIREA 128
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 32.7 bits (73), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 28/54 (51%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
++E+L +F D+N DG + +EL + F G ++ + ++ D N DG
Sbjct: 91 SEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDG 144
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 32.7 bits (73), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
T+E+L +F DKN DG + +EL+ G I + ++ D N DG
Sbjct: 93 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDG 146
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 32.3 bits (72), Expect = 0.069, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 37/70 (52%)
Query: 19 SIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDGFL 78
+I ++E+++ F DK+G G++S +EL FS + I + + D+N DG +
Sbjct: 411 TILLSRERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEV 470
Query: 79 ADKEIDELVK 88
E E+++
Sbjct: 471 DFNEFVEMLQ 480
Score = 25.0 bits (53), Expect = 9.9, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 25 EQLKGMFWRCDKNGDGRLSRQEL 47
+QL +F + D N DG L R EL
Sbjct: 331 KQLTEIFRKLDTNNDGMLDRDEL 353
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 32.3 bits (72), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
T+E+L +F DKN DG + +EL+ G I + ++ D N DG
Sbjct: 93 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDG 146
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 32.0 bits (71), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 24 KEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
+E+LK F DK+ +G +S EL LG + ++ ++ AD +GDG
Sbjct: 3 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDG 55
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 32.0 bits (71), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 24 KEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
+E+LK F DK+ +G +S EL LG + ++ ++ AD +GDG
Sbjct: 82 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDG 134
Score = 30.0 bits (66), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 39/85 (45%), Gaps = 17/85 (20%)
Query: 23 TKEQLKGMFWRCDKNGDGRL-----------------SRQELEDAFSYLGAYIPGWRAKR 65
T+E+L+ M D +G+G + + +EL++AF G+ +
Sbjct: 44 TEEELQDMISEVDADGNGTIEFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISAS 103
Query: 66 ALRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+++++K A
Sbjct: 104 ELRHVMINLGEKLTDEEVEQMIKEA 128
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 76
Score = 32.0 bits (71), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
T+E+L +F DKN DG + +EL+ G I + ++ D N DG
Sbjct: 8 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDG 61
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I
Length = 81
Score = 32.0 bits (71), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
T+E+L +F DKN DG + +EL+ G I + ++ D N DG
Sbjct: 13 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDG 66
>pdb|1QAS|A Chain A, 1-Phosphatidylinositol-4,5-Bisphosphate
Phosphodiesterase Delta 1
pdb|1QAS|B Chain B, 1-Phosphatidylinositol-4,5-Bisphosphate
Phosphodiesterase Delta 1
pdb|1QAT|A Chain A, 1-Phosphatidylinositol-4,5-Bisphosphate
Phosphodiesterase Delta Complex With Samarium (Iii)
Chloride
pdb|1QAT|B Chain B, 1-Phosphatidylinositol-4,5-Bisphosphate
Phosphodiesterase Delta Complex With Samarium (Iii)
Chloride
Length = 622
Score = 32.0 bits (71), Expect = 0.096, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 29/60 (48%)
Query: 33 RCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDGFLADKEIDELVKYAAQ 92
+ DKN D +++ +EL+D L + A++ R D + L D+EI+ K Q
Sbjct: 17 KADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYKMLTQ 76
>pdb|1DJG|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Lanthanum
pdb|1DJG|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Lanthanum
pdb|1DJH|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Barium
pdb|1DJH|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Barium
pdb|1DJI|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Calcium
pdb|1DJI|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Calcium
pdb|1DJW|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Inositol-2-Methylene-1,2-Cyclic-
Monophosphonate
pdb|1DJW|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Inositol-2-Methylene-1,2-Cyclic-
Monophosphonate
pdb|1DJX|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Inositol-1,4,5-Trisphosphate
pdb|1DJX|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Inositol-1,4,5-Trisphosphate
pdb|1DJY|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Inositol-2,4,5-Trisphosphate
pdb|1DJY|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Inositol-2,4,5-Trisphosphate
pdb|1DJZ|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Inositol-4,5-Bisphosphate
pdb|1DJZ|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Inositol-4,5-Bisphosphate
pdb|2ISD|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat
pdb|2ISD|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat
Length = 624
Score = 32.0 bits (71), Expect = 0.096, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 29/60 (48%)
Query: 33 RCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDGFLADKEIDELVKYAAQ 92
+ DKN D +++ +EL+D L + A++ R D + L D+EI+ K Q
Sbjct: 19 KADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYKMLTQ 78
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 32.0 bits (71), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 25 EQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
E+++ F DK+G+G +S EL + LG + +R A+ +GDG
Sbjct: 78 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDG 129
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 16/84 (19%)
Query: 23 TKEQLKGMFWRCDKNGDGRLS----------------RQELEDAFSYLGAYIPGWRAKRA 66
T+ +L+ M D +G+G + +E+ +AF G+ +
Sbjct: 40 TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAE 99
Query: 67 LRYADDNGDGFLADKEIDELVKYA 90
LR+ N L D+E+DE+++ A
Sbjct: 100 LRHVMTNLGEKLTDEEVDEMIREA 123
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 24 KEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
+E+LK F DK+ +G +S EL LG + ++ ++ AD +GDG
Sbjct: 8 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDG 60
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 31.2 bits (69), Expect = 0.15, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 25 EQLKGMFWRCDKNGDGRLSRQELEDAFSYL 54
++L +F + DKNGDG+L R EL + + L
Sbjct: 335 KELTAIFHKMDKNGDGQLDRAELIEGYKEL 364
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 27 LKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDGFLADKEIDEL 86
LK ++ D +GDG+L+++E+ F G + + AD NGDG++ +E E
Sbjct: 7 LKVLYKLMDVDGDGKLTKEEVTSFFKKHGI----EKVAEQVMKADANGDGYITLEEFLEF 62
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 31.2 bits (69), Expect = 0.17, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 25 EQLKGMFWRCDKNGDGRLSRQELEDAFSYL 54
++L +F + DKNGDG+L R EL + + L
Sbjct: 358 KELTAIFHKMDKNGDGQLDRAELIEGYKEL 387
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 13 VTPRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADD 72
+ R+ ++++L F DKNGDG +S EL+ + +G + LR D
Sbjct: 72 LMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVSD 131
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 26/54 (48%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
++E+L +F DKN DG + +EL+ G I + ++ D N DG
Sbjct: 93 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDG 146
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 31.2 bits (69), Expect = 0.17, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 25 EQLKGMFWRCDKNGDGRLSRQELEDAFSYL 54
++L +F + DKNGDG+L R EL + + L
Sbjct: 359 KELTAIFHKMDKNGDGQLDRAELIEGYKEL 388
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 27 LKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDGFLADKEIDEL 86
LK ++ D +GDG+L+++E+ F G + + AD NGDG++ +E E
Sbjct: 77 LKVLYKLMDVDGDGKLTKEEVTSFFKKHGI----EKVAEQVMKADANGDGYITLEEFLEF 132
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 27 LKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDGFLADKEIDEL 86
LK ++ D +GDG+L+++E+ F G + + AD NGDG++ +E E
Sbjct: 77 LKVLYKLMDVDGDGKLTKEEVTSFFKKHGI----EKVAEQVMKADANGDGYITLEEFLEF 132
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 30.8 bits (68), Expect = 0.18, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 24 KEQLKGMFWRCDKNGDGRLSRQELEDAFSYL 54
+++L +F + DKNGDG+L ++EL + ++ L
Sbjct: 354 RKELTDIFKKLDKNGDGQLDKKELIEGYNVL 384
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
++E+L F D+N DG + +EL + F G ++ + ++ D N DG
Sbjct: 91 SEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDG 144
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 26/54 (48%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
++E+L +F DKN DG + +EL+ G I + ++ D N DG
Sbjct: 3 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDG 56
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 30.8 bits (68), Expect = 0.21, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 25 EQLKGMFWRCDKNGDGRLSRQELEDAFSYL 54
++L +F + DKNGDG+L R EL + + L
Sbjct: 335 KELTAIFHKXDKNGDGQLDRAELIEGYKEL 364
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 27 LKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDGFLADKE 82
LK ++ D +GDG+L+++E+ F G + + AD NGDG++ +E
Sbjct: 77 LKILYKLMDADGDGKLTKEEVTTFFKKFGY----EKVVDQIMKADANGDGYITLEE 128
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 30.4 bits (67), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 16 RRASIPYTK-EQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPG-WRAKRALRYADDN 73
R IP + E+++ F D++G+G +S+QEL A LG Y+P + ++ D +
Sbjct: 26 RPVDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLG-YMPNEVELEVIIQRLDMD 84
Query: 74 GDG 76
GDG
Sbjct: 85 GDG 87
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 26/54 (48%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
++E+L +F DKN DG + +EL+ G I + ++ D N DG
Sbjct: 5 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDG 58
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 30.4 bits (67), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADD 72
++++L F DKNGDG +S EL+ + +G + LR D
Sbjct: 81 SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVSD 130
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADD 72
++++L F DKNGDG +S EL+ + +G + LR D
Sbjct: 82 SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVSD 131
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In
The Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 30.4 bits (67), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 15 PRRASIPYTK-EQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIP 59
PRR + + ++LK F D++ DG + ++L+D FS LG P
Sbjct: 5 PRRVKLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPP 50
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 30.0 bits (66), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
++E+L +F DKN DG + EL+ G I + ++ D N DG
Sbjct: 93 SEEELSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDG 146
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 30.0 bits (66), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 28/54 (51%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
++E+L+ F DKN DG + +EL + G ++ + ++ +D N DG
Sbjct: 94 SEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDG 147
Score = 25.4 bits (54), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 34/90 (37%), Gaps = 36/90 (40%)
Query: 23 TKEQLKGMFWRCDKNGDGRL--------------------SRQELEDAFSYLGAYIPGWR 62
TKE+L + D++G G + S +ELED F
Sbjct: 54 TKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELEDCF----------- 102
Query: 63 AKRALRYADDNGDGFLADKEIDELVKYAAQ 92
R D N DGF+ +E+ E+++ +
Sbjct: 103 -----RIFDKNADGFIDIEELGEILRATGE 127
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 30.0 bits (66), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Query: 18 ASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDGF 77
A +P++ + + DKN G ++ E +D ++ + G+R + D +GDG
Sbjct: 56 AGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHFILSMREGFRKR------DSSGDGR 109
Query: 78 LADKEI 83
L E+
Sbjct: 110 LDSNEV 115
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 30.0 bits (66), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
++E+L +F DKN DG + EL+ G I + ++ D N DG
Sbjct: 93 SEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDG 146
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 29.6 bits (65), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
++E+L +F DKN DG + EL+ G I + ++ D N DG
Sbjct: 93 SEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDG 146
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 29.6 bits (65), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELE---DAFSYLGAYIPGWRAKRALRYADDNGDGFLA 79
T +Q+K +F D++ G + +EL+ FS + K L D +GDG +
Sbjct: 39 TPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIG 98
Query: 80 DKEIDELVK 88
+E LVK
Sbjct: 99 VEEFQSLVK 107
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 29.6 bits (65), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELE---DAFSYLGAYIPGWRAKRALRYADDNGDGFLA 79
T +Q+K +F D++ G + +EL+ FS + K L D +GDG +
Sbjct: 40 TPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIG 99
Query: 80 DKEIDELVK 88
+E LVK
Sbjct: 100 VEEFQSLVK 108
>pdb|1BOD|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 74
Score = 29.6 bits (65), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAF-SYLGAYIPGWRAKRAL-RYADDNGDGFLAD 80
+ E+LKG+F + DK GDG+LS++EL+ + + + G L D NGDG ++
Sbjct: 3 SPEELKGIFEKYDKEGDGQLSKEELKLLLQTEFPSLLKGMSTLDELFEELDKNGDGEVSF 62
Query: 81 KEIDELVKYAAQ 92
+E LVK +Q
Sbjct: 63 EEFQVLVKKISQ 74
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The
Cardiac Regulatory Protein Troponin C
Length = 72
Score = 29.6 bits (65), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
++E+L +F DKN DG + EL+ G I + ++ D N DG
Sbjct: 4 SEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDG 57
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 29.6 bits (65), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
++E+L F DKN DG + +EL + G ++ + ++ +D N DG
Sbjct: 91 SEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDG 144
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 29.6 bits (65), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
++E+L F DKN DG + +EL + G ++ + ++ +D N DG
Sbjct: 94 SEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDG 147
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 29.3 bits (64), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
++E+L F DKN DG + +EL + G ++ + ++ +D N DG
Sbjct: 94 SEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDG 147
>pdb|2BWM|A Chain A, 1.8a Crystal Structure Of Of Psathyrella Velutina Lectin
In Complex With Methyl
2-Acetamido-1,2-Dideoxy-1-Seleno-Beta- D-Glucopyranoside
pdb|2BWR|A Chain A, Crystal Structure Of Psathyrella Velutina Lectin At 1.5a
Resolution
pdb|2BWR|B Chain B, Crystal Structure Of Psathyrella Velutina Lectin At 1.5a
Resolution
pdb|2C25|A Chain A, 1.8a Crystal Structure Of Psathyrella Velutina Lectin In
Complex With N-Acetylneuraminic Acid
pdb|2C25|B Chain B, 1.8a Crystal Structure Of Psathyrella Velutina Lectin In
Complex With N-Acetylneuraminic Acid
pdb|2C4D|A Chain A, 2.6a Crystal Structure Of Psathyrella Velutina Lectin In
Complex With N-Acetylglucosamine
Length = 401
Score = 29.3 bits (64), Expect = 0.64, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Query: 37 NGDGRLSRQELEDAFSYLGAYIPGWRAKRALRY-ADDNGDGFL 78
NG G+ + +L A + G Y GWR R LR+ AD GDG L
Sbjct: 145 NGGGQFAPAQL--ALNNFG-YAQGWRLDRHLRFLADVTGDGLL 184
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 29.3 bits (64), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
++E+L +F DKN DG + EL+ G I + ++ D N DG
Sbjct: 93 SEEELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDG 146
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 29.3 bits (64), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
++E+L F DKN DG + +EL + G ++ + ++ +D N DG
Sbjct: 8 SEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDG 61
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 28.9 bits (63), Expect = 0.67, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 26 QLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDGFLADKEIDE 85
Q M R K+ D S +E+ +AF G G+ + LR+ N L D+E+DE
Sbjct: 368 QFLTMMARKMKDTD---SEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDE 424
Query: 86 LVKYAA 91
+++ A
Sbjct: 425 MIREAG 430
Score = 26.2 bits (56), Expect = 4.9, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 27/54 (50%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
++E+++ F K+G+G +S +L + LG + +R A +GDG
Sbjct: 382 SEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMIREAGIDGDG 435
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 28.9 bits (63), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDG 76
++E+L F DKN DG + +EL + G ++ + ++ +D N DG
Sbjct: 94 SEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDG 147
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 28.9 bits (63), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 15 PRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYL 54
+ ++ TKE L +F + D NGDG+L R+EL + + L
Sbjct: 31 SKLTTLEETKE-LTQIFRQLDNNGDGQLDRKELIEGYRKL 69
Score = 28.5 bits (62), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Query: 12 VVTPRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYAD 71
V + ++E+L F + D +G G+++ +EL F W + L+ D
Sbjct: 110 VTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFGVTEVDDETWH--QVLQECD 167
Query: 72 DNGDGFLADKEIDELVK 88
N DG + +E E+++
Sbjct: 168 KNNDGEVDFEEFVEMMQ 184
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 28.9 bits (63), Expect = 0.79, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYL 54
TKE L +F + D NGDG+L R+EL + + L
Sbjct: 313 TKE-LTQIFRQLDNNGDGQLDRKELIEGYRKL 343
Score = 28.9 bits (63), Expect = 0.82, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDGFLADKE 82
++E+L F + D +G G+++ +EL F W + L+ D N DG + +E
Sbjct: 395 SRERLLAAFQQFDSDGSGKITNEELGRLFGVTEVDDETWH--QVLQECDKNNDGEVDFEE 452
Query: 83 IDELVK 88
E+++
Sbjct: 453 FVEMMQ 458
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
N60d Calmodulin Refined With Paramagnetism Based
Strategy
Length = 79
Score = 28.5 bits (62), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 22 YTKEQL---KGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNGDGFL 78
T+EQ+ K F DK+GDG ++ +EL LG + + D +GDG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 63
>pdb|3GF5|A Chain A, Crystal Structure Of The P21 R1-R7 N-Terminal Domain Of
Murine Mvp
pdb|3GF5|B Chain B, Crystal Structure Of The P21 R1-R7 N-Terminal Domain Of
Murine Mvp
pdb|3GNF|B Chain B, P1 Crystal Structure Of The N-Terminal R1-R7 Of Murine Mvp
pdb|3GNG|A Chain A, P21b Crystal Structure Of R1-R7 Of Murine Mvp
Length = 387
Score = 28.5 bits (62), Expect = 1.1, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 13 VTPRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIP 59
+TP + +P T LK + DKNGD ++ E F G YIP
Sbjct: 113 ITPLQVVLPNTALHLKALLDFEDKNGDKVMAGDEW--LFEGPGTYIP 157
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 8/67 (11%)
Query: 30 MFWRCDKNGDGRLSRQEL------EDAF--SYLGAYIPGWRAKRALRYADDNGDGFLADK 81
M D N DG+L E+ ++ F + G + G +A D +G+G++ +
Sbjct: 152 MLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDEN 211
Query: 82 EIDELVK 88
E+D L+K
Sbjct: 212 ELDALLK 218
>pdb|2ZUO|A Chain A, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|B Chain B, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|C Chain C, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|D Chain D, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|E Chain E, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|F Chain F, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|G Chain G, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|H Chain H, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|I Chain I, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|J Chain J, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|K Chain K, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|L Chain L, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|M Chain M, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|N Chain N, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|O Chain O, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|P Chain P, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|Q Chain Q, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|R Chain R, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|S Chain S, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|T Chain T, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|U Chain U, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|V Chain V, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|W Chain W, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|X Chain X, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|Y Chain Y, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|Z Chain Z, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|AA Chain a, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|BB Chain b, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|CC Chain c, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|DD Chain d, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|EE Chain e, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|FF Chain f, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|GG Chain g, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|HH Chain h, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|II Chain i, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|JJ Chain j, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|KK Chain k, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|LL Chain l, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|MM Chain m, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
Length = 861
Score = 28.1 bits (61), Expect = 1.4, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 13 VTPRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIP 59
+TP + +P T LK + DKNGD ++ E F G YIP
Sbjct: 109 ITPLQVVLPNTALHLKALLDFEDKNGDKVMAGDEW--LFEGPGTYIP 153
>pdb|2QZV|A Chain A, Draft Crystal Structure Of The Vault Shell At 9 Angstroms
Resolution
pdb|2QZV|B Chain B, Draft Crystal Structure Of The Vault Shell At 9 Angstroms
Resolution
Length = 873
Score = 28.1 bits (61), Expect = 1.4, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 13 VTPRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIP 59
+TP + +P T LK + DKNGD ++ E F G YIP
Sbjct: 121 ITPLQVVLPNTALHLKALLDFEDKNGDKVMAGDEW--LFEGPGTYIP 165
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 9 GRNVVTPRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELED 49
G V P + P ++++ +F DKN DG+L+ QE ++
Sbjct: 133 GNTVELPEEENTP--EKRVDRIFAMMDKNADGKLTLQEFQE 171
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Query: 15 PRRASIPYTKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWRAKRALRYADDNG 74
P + +KE L F DK G+G + EL LG + + ++ +G
Sbjct: 67 PIKTPTEQSKEMLDA-FRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSG 125
Query: 75 DG 76
DG
Sbjct: 126 DG 127
Score = 26.2 bits (56), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLG 55
+ +Q++ F DK+ DG++S +EL A LG
Sbjct: 3 SADQIQECFQIFDKDNDGKVSIEELGSALRSLG 35
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 22 YTKEQLKGMFWRCDKNGDGRLSRQEL 47
T E+L+ M D++GDG +S QE
Sbjct: 112 LTDEELQEMIDEADRDGDGEVSEQEF 137
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain
(T94-Y172) Of The Human Centrin 2 In Complex With A
Repeat Sequence Of Human Sfi1 (R641-T660)
Length = 79
Score = 27.3 bits (59), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 22 YTKEQLKGMFWRCDKNGDGRLSRQE 46
T E+L+ M D++GDG +S QE
Sbjct: 44 LTDEELQEMIDEADRDGDGEVSEQE 68
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQEL 47
T E+L+ M D++GDG +S QE
Sbjct: 55 TDEELQEMIDEADRDGDGEVSEQEF 79
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 9/68 (13%)
Query: 26 QLKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPGWR------AKRALRYADDNGDGFLA 79
Q+K +F D + G L +EL+ +L + G R K + AD++GDG +
Sbjct: 43 QVKDVFRFIDNDQSGYLDEEELK---FFLQKFESGARELTESETKSLMAAADNDGDGKIG 99
Query: 80 DKEIDELV 87
+E E+V
Sbjct: 100 AEEFQEMV 107
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELEDAFSYLG 55
++++L F DKNGDG +S EL+ + +G
Sbjct: 81 SEQELLEAFKVFDKNGDGLISAAELKHVLTSIG 113
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 26.6 bits (57), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELE---DAFSYLGAYIPGWRAKRALRYADDNGDGFLA 79
+ QLK +F D + G + EL+ F + K L AD +GDG +
Sbjct: 39 SSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIG 98
Query: 80 DKEIDELVK 88
+E E+V+
Sbjct: 99 AEEFQEMVQ 107
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal
Sensor Domain Of Centrin
Length = 96
Score = 26.6 bits (57), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Query: 8 RGRNVVTPRR----ASIPYTKEQ---LKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPG 60
+ + VV+ RR + T+EQ ++ F D +G G + +EL+ A LG
Sbjct: 6 KAKTVVSARRDQKKGRVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKK 65
Query: 61 WRAKRALRYADDNGDGFL 78
K+ + D +G G +
Sbjct: 66 EEIKKMISEIDKDGSGTI 83
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 26.2 bits (56), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Query: 8 RGRNVVTPRRAS----IPYTKEQ---LKGMFWRCDKNGDGRLSRQELEDAFSYLGAYIPG 60
+ + VV+ RR + T+EQ ++ F D +G G + +EL+ A LG
Sbjct: 4 KAKTVVSARRDQKKGRVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKK 63
Query: 61 WRAKRALRYADDNGDGFL 78
K+ + D +G G +
Sbjct: 64 EEIKKMISEIDKDGSGTI 81
>pdb|3BVP|A Chain A, Crystal Structure Of The N-Terminal Catalytic Domain Of
Tp901-1 Integrase
pdb|3BVP|B Chain B, Crystal Structure Of The N-Terminal Catalytic Domain Of
Tp901-1 Integrase
Length = 138
Score = 26.2 bits (56), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 75 DGFLADKEIDELVKYAAQFGYTLS 98
+GF D++ID L KYA G+ +S
Sbjct: 19 EGFSIDEQIDRLTKYAEAMGWQVS 42
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 26.2 bits (56), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 24 KEQLKGMFWRCDKNGDGRLSRQELEDAFSYLGAY-IPGWRAKRALRYADDNGDGFLADKE 82
+E++ F D NGDG + E + +G + + A++ AD++G+G + E
Sbjct: 7 EEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPE 66
Query: 83 IDELVK 88
+L+K
Sbjct: 67 FMDLIK 72
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 25.8 bits (55), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 12/74 (16%)
Query: 24 KEQLKGMFWRCDKNGDGRLSRQEL----EDAFSYLGAYI--------PGWRAKRALRYAD 71
+E+L F D N DG ++ E+ + +G+ + P R K+ + D
Sbjct: 98 EEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMD 157
Query: 72 DNGDGFLADKEIDE 85
N DG++ E E
Sbjct: 158 KNEDGYITLDEFRE 171
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 25.8 bits (55), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 25 EQLKGMFWRCDKNGDGRLSRQELEDAFSYLG 55
E K F D+N DG + + +L + F+ +G
Sbjct: 7 EDFKEAFTVIDQNADGIIDKDDLRETFAAMG 37
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C
Alphas Provided For Regulatory Light Chain. Only
Backbone Atoms Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C
Alphas Provided For Regulatory Light Chain. Only
Backbone Atoms Provided For S2 Fragment
Length = 166
Score = 25.8 bits (55), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 25 EQLKGMFWRCDKNGDGRLSRQELEDAFSYLG 55
E K F D+N DG + + +L + F+ +G
Sbjct: 25 EDFKEAFTVIDQNADGIIDKDDLRETFAAMG 55
>pdb|3A8R|A Chain A, The Structure Of The N-Terminal Regulatory Domain Of A
Plant Nadph Oxidase
pdb|3A8R|B Chain B, The Structure Of The N-Terminal Regulatory Domain Of A
Plant Nadph Oxidase
Length = 179
Score = 25.8 bits (55), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 27 LKGMFWRCDKNGDGRLSRQELEDAFSY 53
L+ F DKN DGRL+ +E+++ +
Sbjct: 100 LRTFFDMVDKNADGRLTAEEVKEIIAL 126
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 25.8 bits (55), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 26 QLKGMFWRCDKNGDGRLSRQEL 47
+L+ +F CD N GRL R+E
Sbjct: 28 RLRSVFAACDANRSGRLEREEF 49
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 25.4 bits (54), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 6/73 (8%)
Query: 23 TKEQLKGMFWRCDKNGDGRLSRQELE---DAFSYLGAYIPGWRAKRALRYADDNGDGFLA 79
T Q+K +F DK+ G + +EL+ FS G + K L D + DG +
Sbjct: 39 TDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIG 98
Query: 80 DKEIDELVKYAAQ 92
DE K AQ
Sbjct: 99 ---ADEFAKMVAQ 108
>pdb|1TA9|A Chain A, Crystal Structure Of Glycerol Dehydrogenase From
Schizosaccharomyces Pombe
pdb|1TA9|B Chain B, Crystal Structure Of Glycerol Dehydrogenase From
Schizosaccharomyces Pombe
Length = 450
Score = 25.4 bits (54), Expect = 9.6, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 50 AFSYLGAYIPGWRAKRALRYADDNGDGFLADKEIDELVKYAAQFGYTLS 98
AF+ Y+ W K A+ AD N A+K +D L +Q G T++
Sbjct: 78 AFTRSYMYVKKWATKSAVVLADQNVWNICANKIVDSL----SQNGMTVT 122
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,180,420
Number of Sequences: 62578
Number of extensions: 128408
Number of successful extensions: 845
Number of sequences better than 100.0: 160
Number of HSP's better than 100.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 468
Number of HSP's gapped (non-prelim): 370
length of query: 98
length of database: 14,973,337
effective HSP length: 64
effective length of query: 34
effective length of database: 10,968,345
effective search space: 372923730
effective search space used: 372923730
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 45 (21.9 bits)