Query 043774
Match_columns 485
No_of_seqs 408 out of 2090
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 14:01:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043774.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043774hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tnx_A Papain; hydrolase, cyto 100.0 5.4E-84 1.8E-88 660.7 33.2 320 18-347 42-362 (363)
2 1pci_A Procaricain; zymogen, h 100.0 3.6E-81 1.2E-85 633.9 31.6 317 23-347 3-321 (322)
3 3qj3_A Cathepsin L-like protei 100.0 1.2E-79 4.2E-84 624.4 32.2 310 31-347 11-331 (331)
4 1by8_A Protein (procathepsin K 100.0 1.1E-78 3.9E-83 613.8 29.3 301 37-347 6-314 (314)
5 3qt4_A Cathepsin-L-like midgut 100.0 2.3E-78 8E-83 613.9 30.2 304 32-347 17-329 (329)
6 2c0y_A Procathepsin S; proenzy 100.0 3.4E-78 1.2E-82 610.6 28.9 301 35-347 5-315 (315)
7 1cs8_A Human procathepsin L; p 100.0 1.4E-77 4.9E-82 606.3 28.3 298 37-347 7-316 (316)
8 2o6x_A Procathepsin L1, secret 100.0 1.3E-76 4.5E-81 597.7 28.9 296 40-349 3-308 (310)
9 1xkg_A DER P I, major mite fec 100.0 1.2E-73 3.9E-78 575.9 28.0 290 41-348 7-303 (312)
10 3pdf_A Cathepsin C, dipeptidyl 100.0 2.2E-66 7.4E-71 543.5 24.5 282 57-347 135-435 (441)
11 3hhi_A Cathepsin B-like cystei 100.0 2.5E-66 8.5E-71 525.5 19.8 277 60-349 2-314 (325)
12 1cqd_A Protein (protease II); 100.0 8.5E-63 2.9E-67 474.9 23.8 217 129-349 2-219 (221)
13 3p5u_A Actinidin; SAD, cystein 100.0 5.8E-63 2E-67 475.8 21.9 215 130-348 1-218 (220)
14 1ppo_A Protease omega; hydrola 100.0 1.5E-62 5.1E-67 471.6 23.2 214 130-347 1-215 (216)
15 1yal_A Chymopapain; hydrolase, 100.0 2E-62 6.7E-67 471.4 23.2 215 130-348 1-216 (218)
16 1iwd_A Ervatamin B; cysteine p 100.0 2.3E-62 7.9E-67 469.9 23.6 213 130-347 1-214 (215)
17 3u8e_A Papain-like cysteine pr 100.0 1.2E-62 4E-67 474.2 20.1 217 130-348 1-220 (222)
18 1s4v_A Cysteine endopeptidase; 100.0 2.7E-62 9.2E-67 473.8 22.6 219 129-350 1-222 (229)
19 3pbh_A Procathepsin B; thiol p 100.0 1.7E-62 5.9E-67 496.2 20.2 262 69-346 11-313 (317)
20 2fo5_A Cysteine proteinase EP- 100.0 5.1E-62 1.7E-66 479.9 21.2 221 129-352 3-229 (262)
21 2cio_A Papain; hydrolase/inhib 100.0 3.1E-61 1.1E-65 461.1 22.9 210 130-347 1-211 (212)
22 3ioq_A CMS1MS2; caricaceae, cy 100.0 2.4E-61 8.2E-66 462.3 21.7 211 130-348 1-212 (213)
23 3kwz_A Cathepsin K; enzyme inh 100.0 4.5E-61 1.5E-65 461.0 23.5 212 130-347 1-215 (215)
24 2b1m_A SPE31; papain-like, sug 100.0 5.4E-61 1.9E-65 469.3 24.1 218 129-350 1-227 (246)
25 2bdz_A Mexicain; cysteine prot 100.0 5.3E-61 1.8E-65 460.1 22.9 211 130-348 1-212 (214)
26 1o0e_A Ervatamin C; plant cyst 100.0 6.5E-61 2.2E-65 457.6 22.2 206 130-347 1-207 (208)
27 3ovx_A Cathepsin S; hydrolase, 100.0 1.9E-60 6.5E-65 457.5 21.8 211 130-347 2-218 (218)
28 2xu3_A Cathepsin L1; hydrolase 100.0 3.2E-60 1.1E-64 456.7 22.9 212 130-347 1-220 (220)
29 1m6d_A Cathepsin F, catsf; pap 100.0 2.6E-60 8.8E-65 455.4 22.1 209 130-347 1-213 (214)
30 3i06_A Cruzipain; autocatalyti 100.0 4.8E-60 1.6E-64 453.8 23.0 208 130-347 1-214 (215)
31 3f75_A Toxopain-2, cathepsin L 100.0 1.8E-60 6E-65 459.6 18.7 214 129-347 6-224 (224)
32 2oul_A Falcipain 2; cysteine p 100.0 5.5E-60 1.9E-64 461.0 21.9 213 128-347 16-240 (241)
33 8pch_A Cathepsin H; hydrolase, 100.0 5.5E-60 1.9E-64 454.9 21.4 213 130-348 1-219 (220)
34 3bwk_A Cysteine protease falci 100.0 9E-60 3.1E-64 460.0 20.8 213 128-347 18-242 (243)
35 3f5v_A DER P 1 allergen; aller 100.0 2.2E-59 7.7E-64 451.3 20.3 210 128-347 8-222 (222)
36 3cbj_A Cathepsin B; cathepsin 100.0 5.8E-56 2E-60 438.7 20.1 212 128-348 5-258 (266)
37 3qsd_A Cathepsin B-like peptid 100.0 1.3E-55 4.6E-60 433.3 20.3 209 129-346 2-252 (254)
38 1deu_A Procathepsin X; cystein 100.0 5.8E-55 2E-59 433.6 20.1 214 128-347 34-275 (277)
39 2wbf_X Serine-repeat antigen p 100.0 2.4E-50 8.2E-55 398.3 22.4 210 132-348 9-262 (265)
40 3ois_A Cysteine protease; alph 100.0 2.4E-49 8.4E-54 396.1 12.3 238 81-330 12-274 (291)
41 2cb5_A Protein (bleomycin hydr 100.0 3.9E-38 1.3E-42 328.1 17.2 209 129-348 47-424 (453)
42 2e01_A Cysteine proteinase 1; 100.0 3.3E-37 1.1E-41 321.4 18.9 208 130-348 53-425 (457)
43 3pw3_A Aminopeptidase C; bleom 100.0 7.6E-33 2.6E-37 282.8 18.0 76 141-217 21-108 (383)
44 2jye_A Granulin A; epithelin, 99.9 7.9E-26 2.7E-30 174.0 4.5 63 376-444 2-64 (72)
45 2jyv_A Granulin-2, granulin F; 99.9 1.4E-24 4.7E-29 167.1 1.6 63 376-444 2-65 (72)
46 2jyt_A Granulin-5, granulin C; 99.9 4.6E-24 1.6E-28 162.6 4.1 60 377-443 2-61 (69)
47 3f75_P Toxopain-2, cathepsin L 99.7 3.8E-18 1.3E-22 144.0 9.6 76 32-107 15-90 (106)
48 2l95_A Crammer, LP06209P; cyst 99.7 8E-17 2.7E-21 129.6 7.3 65 40-106 8-76 (80)
49 1fwo_A Oryzain beta chain; bet 99.4 1.3E-13 4.3E-18 91.1 3.3 35 377-411 1-35 (35)
50 1i8x_A Granulin-1; two beta-ha 99.2 4.2E-12 1.4E-16 80.9 2.0 29 378-411 2-30 (30)
51 1g26_A Granulin A, HGA; granul 99.1 2.3E-12 8E-17 83.2 -1.2 31 377-412 1-31 (31)
52 1pxv_A Cysteine protease; hydr 96.5 0.067 2.3E-06 48.2 14.2 128 147-328 26-162 (183)
53 1x9y_A Cysteine proteinase; ha 96.1 0.17 5.8E-06 50.2 15.8 128 146-327 201-337 (367)
54 1cv8_A Staphopain; cysteine pr 95.4 0.39 1.3E-05 43.1 14.0 118 147-314 17-144 (174)
55 3erv_A Putative C39-like pepti 78.0 5.9 0.0002 37.4 7.9 59 245-313 130-196 (236)
56 4d8b_A Streptopain; papain fol 54.3 14 0.00048 35.3 5.1 52 248-327 172-226 (261)
57 2vwa_A Putative uncharacterize 38.0 15 0.0005 29.1 1.9 27 59-97 20-46 (101)
58 1q2j_A MU-conotoxin SMIIIA; HE 37.3 16 0.00054 21.8 1.5 20 406-425 2-24 (26)
59 1omc_A Omega-conotoxin GVIA; p 34.9 15 0.00052 22.4 1.3 20 416-438 8-27 (28)
60 3iot_A Maltose-binding protein 29.3 11 0.00039 38.1 0.0 18 35-52 17-34 (449)
61 1qk7_A Selenocosmia huwena lec 27.5 23 0.0008 22.5 1.2 20 417-438 8-27 (32)
62 2r9f_A Calpain-1 catalytic sub 27.3 49 0.0017 32.7 4.2 42 288-329 244-315 (339)
63 1dki_A Pyrogenic exotoxin B zy 26.1 1.3E+02 0.0043 30.1 7.1 32 289-327 311-344 (371)
64 1ziv_A Calpain 9; cysteine pro 25.3 56 0.0019 32.3 4.2 28 288-315 243-274 (339)
65 2jye_A Granulin A; epithelin, 25.1 82 0.0028 23.9 4.1 47 384-440 4-53 (72)
66 2nqa_A Calpain 8; calpain, cal 23.4 63 0.0022 31.6 4.2 28 288-315 239-270 (326)
67 1p1p_A AA-conotoxin PIVA; neur 22.6 28 0.00096 20.5 0.8 10 406-415 1-11 (26)
No 1
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya}
Probab=100.00 E-value=5.4e-84 Score=660.74 Aligned_cols=320 Identities=42% Similarity=0.762 Sum_probs=273.4
Q ss_pred CCCccccccCCCCCCCChHHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhcCCCCCeEEecccCCCCCHHH
Q 043774 18 LPSEHSIIGHDFNEFVSEERVFELFQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVEKKNNPGGHVVGLNKFADMSNEE 97 (485)
Q Consensus 18 ~~~~~~i~~~~~~~~~~~~~~~~~F~~f~~~~~k~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~~~s~~~g~N~FsDlt~eE 97 (485)
-..+++|+++...++.+++++.++|++|+++|+|+|.+.+|+.+||+||++|+++|++||+.+.+|++|+|+|+|||.||
T Consensus 42 ~~~~~s~~~y~~~dl~s~~~~~~lf~~f~~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~~~sy~~g~N~FaDlT~eE 121 (363)
T 3tnx_A 42 DKMDFSIVGYSQNDLTSTERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNNSYWLGLNVFADMSNDE 121 (363)
T ss_dssp ------------CCSSCHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHTTSCCSEEECSCTTTTSCHHH
T ss_pred CcccccccCCChhhhcCHHHHHHHHHHHHHHcCCcCCCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEeccccccCCHHH
Confidence 44579999999999999999999999999999999999999999999999999999999998899999999999999999
Q ss_pred HHHHHhhccccccccccCCccccccccccCCCCCCceeccCCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHhCCCccc
Q 043774 98 FREIYLKKIQKPIGKAIGNAKSNLHKTVQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISL 177 (485)
Q Consensus 98 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~CGsCwAfA~~~~lE~~~~i~~~~~~~L 177 (485)
|++++++........... ...........+||++||||++|+|+||||||.||||||||++++||+++++++++++.|
T Consensus 122 f~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~lP~s~DWR~~g~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~L 199 (363)
T 3tnx_A 122 FKEKYTGSIAGNYTTTEL--SYEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSAWAFSAVSTIESIIKIRTGNLNEY 199 (363)
T ss_dssp HHHHHSCSSCSCCCCSSS--SSSCCCCCSCCCCCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCB
T ss_pred HHHHhccccccccccccc--ccccccCcccCCCCcceecccCCCCCCCccCCcCCchhhhhhcccHHHHHHHHcCCCCCc
Confidence 999998765332221110 001111122458999999999999999999999999999999999999999999999999
Q ss_pred ChhHhhhccCCCCCCCCCchHHHHHHHHHcCCcCCCCccccCCCCCCccCCccCcceEEecceeecC-CCHHHHHHHHHc
Q 043774 178 SEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVE-PSDSALLCAAVQ 256 (485)
Q Consensus 178 S~Q~l~dC~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~-~~~~~l~~al~~ 256 (485)
|+|+|+||+..+.||+||++..|++|+.++ ||++|++|||.+.++.|...........+.+|..++ .++.+++.++++
T Consensus 200 SeQ~LvdC~~~~~GC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~e~~l~~~v~~ 278 (363)
T 3tnx_A 200 SEQELLDCDRRSYGCNGGYPWSALQLVAQY-GIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIAN 278 (363)
T ss_dssp CHHHHHHHCTTSCTTBCCCHHHHHHHHHHT-CBCBTTTSCCCSSCCCCCGGGGCSCSBCCCEEEEECSSCHHHHHHHHTT
T ss_pred CHHHHhcccCCCCCCCCCChHHHHhHHHhc-CccccccCCCcCcCCCcccCCCCCceeeccceEEcchhhHHHHHHHHHc
Confidence 999999999988999999999999998766 999999999999888887554444555677777776 788999999999
Q ss_pred CCeEEEEeccCccccccCCCeeeCCCCCCCCccCeEEEEEEeeecCCeeEEEEEcCCCCCCCCCceEEEEeCCCCCCCce
Q 043774 257 QPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKC 336 (485)
Q Consensus 257 gPV~v~i~~~~~~f~~Y~sGIy~~~c~~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~ri~r~~~~~~~~C 336 (485)
|||+|+|++...+|++|++|||..+|+. .+||||+|||||+ +|||||||||++|||+|||||+|+.+...|+|
T Consensus 279 gPvsvai~a~~~~F~~Y~sGVy~~~~~~---~lnHaV~iVGyG~----~YWIVKNSWGt~WGe~GY~rI~Rg~~~~~~~C 351 (363)
T 3tnx_A 279 QPVSVVLEAAGKDFQLYRGGIFVGPCGN---KVDHAVAAVGYGP----NYILIRNSWGTGWGENGYIRIKRGTGNSYGVC 351 (363)
T ss_dssp SCEEEEECCCSHHHHTEEEEEECCCCCS---CCCEEEEEEEEET----TEEEEECSBCTTSTBTTEEEEECCSCCSSCGG
T ss_pred CCcEEEEEecchhhhCCCCCEECCCCCC---CCCeEEEEEEcCC----CcEEEEeCCCCccccCcEEEEEcCCCCCCCcC
Confidence 9999999988889999999999988876 5799999999986 59999999999999999999999988778999
Q ss_pred eeeeeeceeee
Q 043774 337 AINAMASYPIK 347 (485)
Q Consensus 337 gI~~~~~yp~~ 347 (485)
||+++|+||++
T Consensus 352 GI~~~a~yPik 362 (363)
T 3tnx_A 352 GLYTSSFYPVK 362 (363)
T ss_dssp GTTSCEEEEEC
T ss_pred Cccceeeeccc
Confidence 99999999986
No 2
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1
Probab=100.00 E-value=3.6e-81 Score=633.85 Aligned_cols=317 Identities=42% Similarity=0.790 Sum_probs=271.5
Q ss_pred ccccCCCCCCCChHHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhcCCCCCeEEecccCCCCCHHHHHHHH
Q 043774 23 SIIGHDFNEFVSEERVFELFQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVEKKNNPGGHVVGLNKFADMSNEEFREIY 102 (485)
Q Consensus 23 ~i~~~~~~~~~~~~~~~~~F~~f~~~~~k~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~~~s~~~g~N~FsDlt~eEf~~~~ 102 (485)
+++++...++.++..+..+|++|+++|+|+|.+.+|+.+|+.||++|+++|++||+.+.+|++|+|+|+|||.+||++++
T Consensus 3 ~~~~~~~~~~~~e~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~~~~g~N~FaDlt~eEf~~~~ 82 (322)
T 1pci_A 3 SIVGYSQDDLTSTERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKKNNSYWLGLNEFADLSNDEFNEKY 82 (322)
T ss_dssp ---------CTHHHHHHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSCTTTTSCHHHHHHHH
T ss_pred ccccCCcccccchHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhhccCCceEEecCccccCCHHHHHHHh
Confidence 34555555677788899999999999999999999999999999999999999998778999999999999999999988
Q ss_pred hhccccccccccCCcccccccc-ccCCCCCCceeccCCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHhCCCcccChhH
Q 043774 103 LKKIQKPIGKAIGNAKSNLHKT-VQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQE 181 (485)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~lP~s~DwR~~g~vtpVkdQg~CGsCwAfA~~~~lE~~~~i~~~~~~~LS~Q~ 181 (485)
++.......... ...... ....+||++||||++|+|+||||||.||||||||++++||++++|++++++.||+|+
T Consensus 83 ~g~~~~~~~~~~----~~~~~~~~~~~~lP~~~DwR~~g~vt~VkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~lSeq~ 158 (322)
T 1pci_A 83 VGSLIDATIEQS----YDEEFINEDIVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQE 158 (322)
T ss_dssp CCCBCCCSSCCC----CSEECCCCCCCCSCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHH
T ss_pred cCCCCccccccc----cccccccccccCCCCeEecccCCCCCCccccccCCccHHHHHHHHHHHHHHHHcCCccccCHHH
Confidence 765422111000 000011 112379999999999999999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCCCchHHHHHHHHHcCCcCCCCccccCCCCCCccCCccCcceEEecceeecC-CCHHHHHHHHHcCCeE
Q 043774 182 LVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVE-PSDSALLCAAVQQPIS 260 (485)
Q Consensus 182 l~dC~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~-~~~~~l~~al~~gPV~ 260 (485)
|+||+..+.||+||++..|++|+.++ ||++|++|||.+.++.|.........++|++|..++ +++++|+++|++|||+
T Consensus 159 lvdC~~~~~gC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~e~~l~~~l~~GPV~ 237 (322)
T 1pci_A 159 LVDCERRSHGCKGGYPPYALEYVAKN-GIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVS 237 (322)
T ss_dssp HHHSCTTSCGGGCBCHHHHHHHHHHH-CBCBTTTSCCCSSCCCCTTTTCCSCCBCCCCEEECCSSBHHHHHHHHHHSCEE
T ss_pred HHhhcCCCCCCCCCCHHHHHHHHHHh-CCCchhhCCCCCCCCCCCCCCCCCceEEEeeEEEeCCCcHHHHHHHHHHCCEE
Confidence 99999778999999999999999888 699999999999999998654334456789999998 6899999999999999
Q ss_pred EEEeccCccccccCCCeeeCCCCCCCCccCeEEEEEEeeecCCeeEEEEEcCCCCCCCCCceEEEEeCCCCCCCceeeee
Q 043774 261 VGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINA 340 (485)
Q Consensus 261 v~i~~~~~~f~~Y~sGIy~~~c~~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~ri~r~~~~~~~~CgI~~ 340 (485)
|+|++...+|++|++|||+..|+. .++|||+|||||+++|++|||||||||++|||+|||||+|+.+...|.|||++
T Consensus 238 v~i~~~~~~f~~Y~~Gvy~~~c~~---~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~n~CgI~~ 314 (322)
T 1pci_A 238 VVVESKGRPFQLYKGGIFEGPCGT---KVDGAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYK 314 (322)
T ss_dssp EEECTTCHHHHTEEEEEECCSCCS---CCCEEEEEEEEEEETTEEEEEEECSBCSSSTBTTEEEEECCCSBSSCGGGGGG
T ss_pred EEEecccccccccCCeEeCCCCCC---CCCEEEEEEEEeccCCccEEEEEeCCCCcccCCeEEEEEcCCCCCCCcCCccc
Confidence 999996578999999999887875 47999999999999999999999999999999999999999755568999999
Q ss_pred eeceeee
Q 043774 341 MASYPIK 347 (485)
Q Consensus 341 ~~~yp~~ 347 (485)
+++||+.
T Consensus 315 ~~~yp~~ 321 (322)
T 1pci_A 315 SSYYPTK 321 (322)
T ss_dssp CCEEECC
T ss_pred ceeEEEe
Confidence 9999975
No 3
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0
Probab=100.00 E-value=1.2e-79 Score=624.45 Aligned_cols=310 Identities=38% Similarity=0.710 Sum_probs=268.3
Q ss_pred CCCChHHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhcC----CCCCeEEecccCCCCCHHHHHHHHhhcc
Q 043774 31 EFVSEERVFELFQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVEKKN----NPGGHVVGLNKFADMSNEEFREIYLKKI 106 (485)
Q Consensus 31 ~~~~~~~~~~~F~~f~~~~~k~Y~~~~E~~~R~~iF~~Nl~~I~~~N~----~~~s~~~g~N~FsDlt~eEf~~~~~~~~ 106 (485)
..+.+..++.+|++|+++|+|+|.+.+|+.+|++||++|+++|++||+ ++.+|++|+|+|+|||.|||++++++..
T Consensus 11 ~~~~~~~l~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~~~~~~~ 90 (331)
T 3qj3_A 11 SALPSTFVAEKWENFKTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQGLVSYTLGVNLFTDMTPEEMKAYTHGLI 90 (331)
T ss_dssp --CCHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSEEECCSTTTTCCHHHHHHHHSCCC
T ss_pred CCCCCHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCceeecccccccCCHHHHHHHhcccc
Confidence 356788899999999999999999999999999999999999999997 4789999999999999999999988654
Q ss_pred ccccccccCCcccccc-c-cccCCCCCCceeccCCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHhCC--CcccChhHh
Q 043774 107 QKPIGKAIGNAKSNLH-K-TVQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGD--LISLSEQEL 182 (485)
Q Consensus 107 ~~~~~~~~~~~~~~~~-~-~~~~~~lP~s~DwR~~g~vtpVkdQg~CGsCwAfA~~~~lE~~~~i~~~~--~~~LS~Q~l 182 (485)
................ . .....+||++||||++|+|+||||||.||||||||++++||++++++++. +++||+|+|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~~~LSeQ~L 170 (331)
T 3qj3_A 91 MPADLHKNGIPIKTREDLGLNASVRYPASFDWRDQGMVSPVKNQGSCGSSWAFSSTGAIESQMKIANGAGYDSSVSEQQL 170 (331)
T ss_dssp CCSSTTTTCEEECSGGGGTCCSSCCCCSSEEGGGGTCSCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCTTSCCCBCHHHH
T ss_pred ccccccccCcccccccccccccccCCCcceecccCCccCCCccCcccchhhHHHHHHHHHHHHHHHhCCCcccCcCHHHH
Confidence 3221111000000000 0 00234799999999999999999999999999999999999999999998 899999999
Q ss_pred hhccCCCCCCCCCchHHHHHHHHHcCCcCCCCccccCCCCCCccCCccCcceEEecceeecC-CCHHHHHHHHHc-CCeE
Q 043774 183 VDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVE-PSDSALLCAAVQ-QPIS 260 (485)
Q Consensus 183 ~dC~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~-~~~~~l~~al~~-gPV~ 260 (485)
+||+..+.||+||++..|++|+.+++||++|++|||.+.++.|.... ....++|++|..++ .++++|+++|++ |||+
T Consensus 171 vdC~~~~~GC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~~~e~~lk~al~~~GPV~ 249 (331)
T 3qj3_A 171 VDCVPNALGCSGGWMNDAFTYVAQNGGIDSEGAYPYEMADGNCHYDP-NQVAARLSGYVYLSGPDENMLADMVATKGPVA 249 (331)
T ss_dssp HHHCTTSCGGGCCCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCT-TSEEECCSEEEEESSCCHHHHHHHHHHHCCEE
T ss_pred hhhccCCCCCCCCCHHHHHHHHHHcCCcCcccccCccCCCCCCCCCc-ccceeEeeEEEEeCCCCHHHHHHHHHhCCCEE
Confidence 99998889999999999999999998999999999999999998653 44567899999998 689999999986 9999
Q ss_pred EEEeccCccccccCCCeeeC-CCCCCCCccCeEEEEEEeeecCCeeEEEEEcCCCCCCCCCceEEEEeCCCCCCCceeee
Q 043774 261 VGMVGSASDFQLYTSGIYNG-DCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAIN 339 (485)
Q Consensus 261 v~i~~~~~~f~~Y~sGIy~~-~c~~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~ri~r~~~~~~~~CgI~ 339 (485)
|+|++... |++|++|||.. .|.. ..++|||+|||||+++|++|||||||||++|||+|||||+|+.+ |.|||+
T Consensus 250 v~i~a~~~-f~~Y~~Gvy~~~~c~~--~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~CgI~ 323 (331)
T 3qj3_A 250 VAFDADDP-FGSYSGGVYYNPTCET--NKFTHAVLIVGYGNENGQDYWLVKNSWGDGWGLDGYFKIARNAN---NHCGIA 323 (331)
T ss_dssp EEECCCTT-GGGEEEEEECCTTCCS--SCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTT
T ss_pred EEEEcccc-cccccCceEeCCCCCC--CcCCEEEEEEEEeccCCceEEEEEcCCCCCcCCCCEEEEEcCCC---CccCcC
Confidence 99999654 99999999986 4653 36899999999999999999999999999999999999999863 799999
Q ss_pred eeeceeee
Q 043774 340 AMASYPIK 347 (485)
Q Consensus 340 ~~~~yp~~ 347 (485)
++++||++
T Consensus 324 ~~~~~p~v 331 (331)
T 3qj3_A 324 GVASVPTL 331 (331)
T ss_dssp TSCEEEEC
T ss_pred CceeeeeC
Confidence 99999974
No 4
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A
Probab=100.00 E-value=1.1e-78 Score=613.82 Aligned_cols=301 Identities=37% Similarity=0.702 Sum_probs=261.7
Q ss_pred HHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhcC----CCCCeEEecccCCCCCHHHHHHHHhhcccccccc
Q 043774 37 RVFELFQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVEKKN----NPGGHVVGLNKFADMSNEEFREIYLKKIQKPIGK 112 (485)
Q Consensus 37 ~~~~~F~~f~~~~~k~Y~~~~E~~~R~~iF~~Nl~~I~~~N~----~~~s~~~g~N~FsDlt~eEf~~~~~~~~~~~~~~ 112 (485)
+++.+|++|+++|+|+|.+.+|+.+|+.||++|+++|++||+ ++.+|++|+|+|+|||.+||++++++........
T Consensus 6 ~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~FaDlt~eEf~~~~~g~~~~~~~~ 85 (314)
T 1by8_A 6 ILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLSHS 85 (314)
T ss_dssp THHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSEEECCCTTSSSCHHHHHHHSCCCCCCSCCC
T ss_pred HHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEEcccccccCCHHHHHHHhccCCCCcccc
Confidence 467789999999999999989999999999999999999997 3579999999999999999999887654322110
Q ss_pred ccCCccccccccccCCC-CCCceeccCCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHhCCCcccChhHhhhccCCCCC
Q 043774 113 AIGNAKSNLHKTVQSCE-APSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYG 191 (485)
Q Consensus 113 ~~~~~~~~~~~~~~~~~-lP~s~DwR~~g~vtpVkdQg~CGsCwAfA~~~~lE~~~~i~~~~~~~LS~Q~l~dC~~~~~g 191 (485)
.. ...... ....+ ||++||||++|+|+||||||.||||||||++++||++++|++++++.||+|+|+||+..+.|
T Consensus 86 ~~---~~~~~~-~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFs~~~alE~~~~i~~g~~~~LSeq~lvdC~~~~~g 161 (314)
T 1by8_A 86 RS---NDTLYI-PEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDG 161 (314)
T ss_dssp CS---SSSSBC-CCCSSCCCSCCBSTTTTCSCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHTTCTTSCG
T ss_pred cC---Cccccc-cccccCCCCeEeCCCCCCCCCcccCCCCCCcHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcCCCCC
Confidence 00 000100 11224 99999999999999999999999999999999999999999999999999999999987899
Q ss_pred CCCCchHHHHHHHHHcCCcCCCCccccCCCCCCccCCccCcceEEecceeecC-CCHHHHHHHHHc-CCeEEEEeccCcc
Q 043774 192 CDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVE-PSDSALLCAAVQ-QPISVGMVGSASD 269 (485)
Q Consensus 192 C~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~-~~~~~l~~al~~-gPV~v~i~~~~~~ 269 (485)
|+||++..|++|+.+++||++|++|||.+.++.|.... ....++|++|..++ .++++|+++|++ |||+|+|++...+
T Consensus 162 C~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~i~~~~~~ 240 (314)
T 1by8_A 162 CGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNP-TGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTS 240 (314)
T ss_dssp GGCCCSHHHHHHHHHTTCBCBTTTSCCCSSCCCCCCCG-GGCCBCCSCEEECCSSCHHHHHHHHHHHCCEEEEECCCSHH
T ss_pred CcCCCHHHHHHHHHHcCCcCcHhhCCCCCCCCCcCCCC-ccceeEECcEEEecCCCHHHHHHHHHHcCCEEEEEEeChHH
Confidence 99999999999998778999999999999999998643 23456789999998 689999999986 9999999996578
Q ss_pred ccccCCCeeeCC-CCCCCCccCeEEEEEEeeecCCeeEEEEEcCCCCCCCCCceEEEEeCCCCCCCceeeeeeeceeee
Q 043774 270 FQLYTSGIYNGD-CSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPIK 347 (485)
Q Consensus 270 f~~Y~sGIy~~~-c~~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~ri~r~~~~~~~~CgI~~~~~yp~~ 347 (485)
|++|++|||+.+ |+. ..++|||+|||||+++|++|||||||||++|||+|||||+|+. .|.|||+++++||+.
T Consensus 241 f~~Y~~Gvy~~~~c~~--~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~---~n~CgI~~~~~~p~~ 314 (314)
T 1by8_A 241 FQFYSKGVYYDESCNS--DNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNK---NNACGIANLASFPKM 314 (314)
T ss_dssp HHTEEEECBCCTTCCS--SCCCEEEEEEEEEEETTEEEEEEECSBTTTSTBTTEEEECCSS---SCGGGTTSSCEEECC
T ss_pred hhhccCceecCCCCCC--CCCCeEEEEEEEeccCCceEEEEEcCCCCCcCcCCEEEEEcCC---CCcCCccCeeEEeeC
Confidence 999999999865 764 3689999999999999999999999999999999999999985 369999999999973
No 5
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor}
Probab=100.00 E-value=2.3e-78 Score=613.87 Aligned_cols=304 Identities=38% Similarity=0.713 Sum_probs=261.3
Q ss_pred CCChHHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhcC----CCCCeEEecccCCCCCHHHHHHHHhhccc
Q 043774 32 FVSEERVFELFQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVEKKN----NPGGHVVGLNKFADMSNEEFREIYLKKIQ 107 (485)
Q Consensus 32 ~~~~~~~~~~F~~f~~~~~k~Y~~~~E~~~R~~iF~~Nl~~I~~~N~----~~~s~~~g~N~FsDlt~eEf~~~~~~~~~ 107 (485)
.+++..++..|++|+++|+|+|.+.+|+.+|++||++|+++|++||+ ++.+|++|+|+|+|||.|||++ +++...
T Consensus 17 ~~~~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~-~~g~~~ 95 (329)
T 3qt4_A 17 SLPKSLFQEQWSQFKLTHKKSYSSPIEEIRRQLIFKDNVAKIAEHNAKFEKGEVTYSKAMNQFGDMSKEEFLA-YVNRGK 95 (329)
T ss_dssp ---CCHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSEEECCCGGGGCCHHHHHH-HHHHTC
T ss_pred ccCHHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCeEEeccccccCCHHHHHH-hcCCcc
Confidence 34567788999999999999999989999999999999999999997 4789999999999999999999 776542
Q ss_pred cccccccCCccccccccccCCCCCCceeccCCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHhCCCcccChhHhhhccC
Q 043774 108 KPIGKAIGNAKSNLHKTVQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDT 187 (485)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~CGsCwAfA~~~~lE~~~~i~~~~~~~LS~Q~l~dC~~ 187 (485)
........ ...........+||++||||++ +|+||||||.||||||||++++||++++++++++++||+|+|+||+.
T Consensus 96 ~~~~~~~~--~~~~~~~~~~~~lP~~~DwR~~-~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~LvdC~~ 172 (329)
T 3qt4_A 96 AQKPKHPE--NLRMPYVSSKKPLAASVDWRSN-AVSEVKDQGQCGSSWSFSTTGAVEGQLALQRGRLTSLSEQNLIDCSS 172 (329)
T ss_dssp CC--------CCEEECCCCCSCCCSCEECTTT-SCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCG
T ss_pred cccccccc--cccccccCCccCCCCCEEcccc-ccCCCccCCCCcChHHHHHHHHHHHHHHHHcCCcccCCHHHHHHhcc
Confidence 21110000 0000111112479999999999 99999999999999999999999999999999999999999999997
Q ss_pred --CCCCCCCCchHHHHHHHHHcCCcCCCCccccCCCCCCccCCccCcceEEecceeecC-CCHHHHHHHHHc-CCeEEEE
Q 043774 188 --TSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVE-PSDSALLCAAVQ-QPISVGM 263 (485)
Q Consensus 188 --~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~-~~~~~l~~al~~-gPV~v~i 263 (485)
.+.||+||++..|++|++++ ||++|++|||.+.++.|.... ....++|++|..++ .++++|+++|++ |||+|+|
T Consensus 173 ~~g~~GC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~~~e~~lk~al~~~GPV~v~i 250 (329)
T 3qt4_A 173 SYGNAGCDGGWMDSAFSYIHDY-GIMSESAYPYEAQGDYCRFDS-SQSVTTLSGYYDLPSGDENSLADAVGQAGPVAVAI 250 (329)
T ss_dssp GGTCCTTBCCCHHHHHHHHHHS-CBCBTTTSCCCSSCCCCCCCG-GGCCBCCSEEEECCTTCHHHHHHHHHHTCCEEEEE
T ss_pred ccCCCCCCCCChhHHHHHHHHc-CCCcHHHeeeecCCCCCCCCc-ccceEEeceEEEecCCCHHHHHHHHHhCCCEEEEE
Confidence 47899999999999999988 999999999999999998653 34456889999998 689999999986 9999999
Q ss_pred eccCccccccCCCeeeC-CCCCCCCccCeEEEEEEeeecCCeeEEEEEcCCCCCCCCCceEEEEeCCCCCCCceeeeeee
Q 043774 264 VGSASDFQLYTSGIYNG-DCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMA 342 (485)
Q Consensus 264 ~~~~~~f~~Y~sGIy~~-~c~~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~ri~r~~~~~~~~CgI~~~~ 342 (485)
++.. +|++|++|||.. .|.. ..++|||+|||||+++|++|||||||||++|||+|||||+|+.+ |.|||++++
T Consensus 251 ~a~~-~f~~Y~~GVy~~~~c~~--~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~CgI~~~~ 324 (329)
T 3qt4_A 251 DATD-ELQFYSGGLFYDQTCNQ--SDLNHGVLVVGYGSDNGQDYWILKNSWGSGWGESGYWRQVRNYG---NNCGIATAA 324 (329)
T ss_dssp CCCG-GGTTEEEEEECCSSCCS--SCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEESSSS---SGGGTTTTC
T ss_pred ecCh-hhhhccCceeecCCCCC--CcCCEEEEEEEEEeeCCccEEEEEeCCCCcccCCcEEEEEeCCC---CccCCCCce
Confidence 9964 999999999986 4653 36899999999999999999999999999999999999999863 699999999
Q ss_pred ceeee
Q 043774 343 SYPIK 347 (485)
Q Consensus 343 ~yp~~ 347 (485)
+||++
T Consensus 325 ~yp~v 329 (329)
T 3qt4_A 325 SYPAL 329 (329)
T ss_dssp EEEEC
T ss_pred eEeeC
Confidence 99974
No 6
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens}
Probab=100.00 E-value=3.4e-78 Score=610.60 Aligned_cols=301 Identities=36% Similarity=0.701 Sum_probs=261.4
Q ss_pred hHHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhcC----CCCCeEEecccCCCCCHHHHHHHHhhcccccc
Q 043774 35 EERVFELFQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVEKKN----NPGGHVVGLNKFADMSNEEFREIYLKKIQKPI 110 (485)
Q Consensus 35 ~~~~~~~F~~f~~~~~k~Y~~~~E~~~R~~iF~~Nl~~I~~~N~----~~~s~~~g~N~FsDlt~eEf~~~~~~~~~~~~ 110 (485)
+..++.+|++|+++|+|+|.+.+|+.+|+.||++|+++|++||+ ++.+|++|+|+|+|||.+||++++++......
T Consensus 5 ~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~s~~~g~N~FaDlt~eEf~~~~~g~~~~~~ 84 (315)
T 2c0y_A 5 DPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQ 84 (315)
T ss_dssp CGGGHHHHHHHHHHHTCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCGGGGCCHHHHHHHTTSBCCCCG
T ss_pred hHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEeccCccccCCHHHHHHHhcCCCCCcc
Confidence 34567899999999999999888999999999999999999997 35799999999999999999998877543221
Q ss_pred ccccCCccccccccccCCCCCCceeccCCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHhCCCcccChhHhhhcc-C--
Q 043774 111 GKAIGNAKSNLHKTVQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCD-T-- 187 (485)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~CGsCwAfA~~~~lE~~~~i~~~~~~~LS~Q~l~dC~-~-- 187 (485)
.. .. .... .....+||++||||++|+|+||||||.||||||||++++||++++|++++++.||+|+|+||+ .
T Consensus 85 ~~-~~---~~~~-~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAfs~~~alE~~~~i~~g~~~~LSeq~lvdC~~~~~ 159 (315)
T 2c0y_A 85 WQ-RN---ITYK-SNPNRILPDSVDWREKGCVTEVKYQGSCGAAWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKY 159 (315)
T ss_dssp GG-SC---BCC-------CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGG
T ss_pred cc-CC---cccc-CcccCCCCCeEecCCCCCcCCCcCcccCCCcHHHHHHHHHHHHHHHHhCCCcCcCHHHHHhhccccc
Confidence 11 10 0000 111237999999999999999999999999999999999999999999999999999999998 4
Q ss_pred CCCCCCCCchHHHHHHHHHcCCcCCCCccccCCCCCCccCCccCcceEEecceeecC-CCHHHHHHHHHc-CCeEEEEec
Q 043774 188 TSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVE-PSDSALLCAAVQ-QPISVGMVG 265 (485)
Q Consensus 188 ~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~-~~~~~l~~al~~-gPV~v~i~~ 265 (485)
.+.||+||++..|++|+.+++||++|++|||.+.++.|.... ....++|++|..++ .++++|+++|++ |||+|+|++
T Consensus 160 ~~~gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~i~~ 238 (315)
T 2c0y_A 160 GNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDS-KYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDA 238 (315)
T ss_dssp TCCGGGCBCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCG-GGEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECC
T ss_pred CCCCCCCCCHHHHHHHHHHhCCcCchhcCCCccCCCCcccCC-cccccccCCeEEeCCCCHHHHHHHHHHcCCEEEEEec
Confidence 489999999999999998777999999999999999998643 34567889999997 689999999986 999999999
Q ss_pred cCccccccCCCeeeCC-CCCCCCccCeEEEEEEeeecCCeeEEEEEcCCCCCCCCCceEEEEeCCCCCCCceeeeeeece
Q 043774 266 SASDFQLYTSGIYNGD-CSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASY 344 (485)
Q Consensus 266 ~~~~f~~Y~sGIy~~~-c~~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~ri~r~~~~~~~~CgI~~~~~y 344 (485)
...+|++|++|||+.+ |+. .++|||+|||||+++|++|||||||||++|||+|||||+|+. .|.|||+++++|
T Consensus 239 ~~~~f~~Y~~Gvy~~~~c~~---~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~---~n~CgI~~~~~~ 312 (315)
T 2c0y_A 239 RHPSFFLYRSGVYYEPSCTQ---NVNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNK---GNHCGIASFPSY 312 (315)
T ss_dssp CSHHHHTEEEEEECCTTCCS---CCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSS---SSGGGTTTSCEE
T ss_pred CchhhhccCCCcccCCCCCC---cCCEEEEEEEEeecCCCcEEEEEcCCCCCcCCCcEEEEEcCC---CCccCcCceeEE
Confidence 6578999999999865 765 689999999999999999999999999999999999999985 369999999999
Q ss_pred eee
Q 043774 345 PIK 347 (485)
Q Consensus 345 p~~ 347 (485)
|+.
T Consensus 313 p~~ 315 (315)
T 2c0y_A 313 PEI 315 (315)
T ss_dssp EEC
T ss_pred eeC
Confidence 973
No 7
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A*
Probab=100.00 E-value=1.4e-77 Score=606.27 Aligned_cols=298 Identities=40% Similarity=0.791 Sum_probs=260.1
Q ss_pred HHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhcC----CCCCeEEecccCCCCCHHHHHHHHhhcccccccc
Q 043774 37 RVFELFQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVEKKN----NPGGHVVGLNKFADMSNEEFREIYLKKIQKPIGK 112 (485)
Q Consensus 37 ~~~~~F~~f~~~~~k~Y~~~~E~~~R~~iF~~Nl~~I~~~N~----~~~s~~~g~N~FsDlt~eEf~~~~~~~~~~~~~~ 112 (485)
.++.+|++|+++|+|+| +.+|+.+|+.||++|+++|++||+ ++.+|++|+|+|+|||.+||++++++.......
T Consensus 7 ~~~~~f~~~~~~~~k~Y-~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~~- 84 (316)
T 1cs8_A 7 SLEAQWTKWKAMHNRLY-GMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPR- 84 (316)
T ss_dssp GGHHHHHHHHHHTTCCC-CTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBCCCCCS-
T ss_pred HHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHHHHhhhccccCCcceEEccCccCCCCHHHHHHHhcCCCCCccc-
Confidence 46778999999999999 788999999999999999999997 368999999999999999999888765422111
Q ss_pred ccCCccccccccccCCCCCCceeccCCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHhCCCcccChhHhhhccC--CCC
Q 043774 113 AIGNAKSNLHKTVQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDT--TSY 190 (485)
Q Consensus 113 ~~~~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~CGsCwAfA~~~~lE~~~~i~~~~~~~LS~Q~l~dC~~--~~~ 190 (485)
.. .... .....+||++||||++|+|+||||||.||||||||++++||++++|++|+++.||+|+|+||+. .+.
T Consensus 85 -~~---~~~~-~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~~~g~~ 159 (316)
T 1cs8_A 85 -KG---KVFQ-EPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNE 159 (316)
T ss_dssp -CC---EECC-CCTTCCCCSCEEGGGGTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCC
T ss_pred -cC---cccc-CccccCCCCcEecCCCCCcCCCCcccCCccHHHHHHHHHHHHHHHHHcCCCcCcCHHHHHHhccccCCC
Confidence 00 0001 1112379999999999999999999999999999999999999999999999999999999986 478
Q ss_pred CCCCCchHHHHHHHHHcCCcCCCCccccCCCCCCccCCccCcceEEecceeecCCCHHHHHHHHHc-CCeEEEEeccCcc
Q 043774 191 GCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQ-QPISVGMVGSASD 269 (485)
Q Consensus 191 gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~l~~al~~-gPV~v~i~~~~~~ 269 (485)
||+||++..|++|+++++||++|++|||.+.++.|.... ....++|++|..++.++++|+++|++ |||+|+|++...+
T Consensus 160 gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~~~~~ik~~l~~~GPV~v~i~~~~~~ 238 (316)
T 1cs8_A 160 GCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNP-KYSVANDAGFVDIPKQEKALMKAVATVGPISVAIDAGHES 238 (316)
T ss_dssp GGGCBCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCG-GGEEECCCCEEECCSCHHHHHHHHHHHCCEEEEECCCSHH
T ss_pred CCCCCCHHHHHHHHHHhCCcCchhccCCCCCCCCcCCCC-ccceeEeccEEEeCCCHHHHHHHHHhcCCEEEEEecCChh
Confidence 999999999999998677999999999999999998643 34567899999998789999999986 9999999996568
Q ss_pred ccccCCCeeeCC-CCCCCCccCeEEEEEEee---ec-CCeeEEEEEcCCCCCCCCCceEEEEeCCCCCCCceeeeeeece
Q 043774 270 FQLYTSGIYNGD-CSNDPYYIDHAVLIVGYG---SE-NGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASY 344 (485)
Q Consensus 270 f~~Y~sGIy~~~-c~~~~~~~~HaV~iVGyg---~~-~g~~yWivkNSWG~~WGe~GY~ri~r~~~~~~~~CgI~~~~~y 344 (485)
|++|++|||..+ |+. ..++|||+||||| ++ +|++|||||||||++|||+|||||+|+. .|.|||+++++|
T Consensus 239 f~~Y~~Gvy~~~~c~~--~~~~HaV~iVGygd~~~~~~g~~yWivkNSWG~~WGe~GY~~i~r~~---~n~CgI~~~~~~ 313 (316)
T 1cs8_A 239 FLFYKEGIYFEPDCSS--EDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDR---RNHCGIASAASY 313 (316)
T ss_dssp HHTEEEEEECCTTCCS--SCCCEEEEEEEEEEECCSSCCEEEEEEECSBCTTSTBTTEEEEECSS---SSGGGTTTSCEE
T ss_pred hccccCceECCCCCCC--CCCCEEEEEEEecCCcccCCCCcEEEEEcCCCCCcccCCEEEEECCC---CCccCccceeeE
Confidence 999999999865 764 3689999999999 66 7999999999999999999999999985 368999999999
Q ss_pred eee
Q 043774 345 PIK 347 (485)
Q Consensus 345 p~~ 347 (485)
|+.
T Consensus 314 p~~ 316 (316)
T 1cs8_A 314 PTV 316 (316)
T ss_dssp ECC
T ss_pred eeC
Confidence 973
No 8
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica}
Probab=100.00 E-value=1.3e-76 Score=597.73 Aligned_cols=296 Identities=40% Similarity=0.736 Sum_probs=255.6
Q ss_pred HHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhcCC----CCCeEEecccCCCCCHHHHHHHHhh-cccccccccc
Q 043774 40 ELFQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVEKKNN----PGGHVVGLNKFADMSNEEFREIYLK-KIQKPIGKAI 114 (485)
Q Consensus 40 ~~F~~f~~~~~k~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~----~~s~~~g~N~FsDlt~eEf~~~~~~-~~~~~~~~~~ 114 (485)
.+|++|+++|+|+|.+.+|+.+| .||++|+++|++||+. +.+|++|+|+|+|||.+||++++++ ..........
T Consensus 3 ~~f~~~~~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~~~~~~ 81 (310)
T 2o6x_A 3 DLWHQWKRMYNKEYNGADDQHRR-NIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYLTEMSRASDILSH 81 (310)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHTTSSSEEECCCTTTTSCHHHHHHHHCCCCCCGGGGSCS
T ss_pred HHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHhhhccCCCcEEEeccccCCCCHHHHHHHhcCCCCCccccccc
Confidence 57999999999999988899999 9999999999999972 6899999999999999999988876 3321111000
Q ss_pred CCccccccccccCCCCCCceeccCCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHhCCCcccChhHhhhccC--CCCCC
Q 043774 115 GNAKSNLHKTVQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDT--TSYGC 192 (485)
Q Consensus 115 ~~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~CGsCwAfA~~~~lE~~~~i~~~~~~~LS~Q~l~dC~~--~~~gC 192 (485)
.........+||++||||++|+|+||||||.||||||||++++||++++|++++++.||+|+|+||+. .+.||
T Consensus 82 -----~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAfa~~~alE~~~~i~~g~~~~LS~q~lvdC~~~~~~~gC 156 (310)
T 2o6x_A 82 -----GVPYEANNRAVPDKIDWRESGYVTEVKDQGNCGSGWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSRPWGNNGC 156 (310)
T ss_dssp -----SEECCC----CCSCEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSSCCCBCHHHHHHHCGGGTCCGG
T ss_pred -----CCccccccCCCCCeEecCcCCCCCCcccCCCCCccHHHHhHHHHHHHHHHHhCCCcCcCHHHHHHhhhccCCCCC
Confidence 00111111269999999999999999999999999999999999999999999999999999999986 48999
Q ss_pred CCCchHHHHHHHHHcCCcCCCCccccCCCCCCccCCccCcceEEecceeecC-CCHHHHHHHHHc-CCeEEEEeccCccc
Q 043774 193 DGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVE-PSDSALLCAAVQ-QPISVGMVGSASDF 270 (485)
Q Consensus 193 ~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~-~~~~~l~~al~~-gPV~v~i~~~~~~f 270 (485)
+||++..|++|+. ++||++|++|||.+.++.|.... ....++|++|..++ .++++|+++|++ |||+|+|++. .+|
T Consensus 157 ~GG~~~~a~~yi~-~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~~~~~~i~~~l~~~GPV~v~i~~~-~~f 233 (310)
T 2o6x_A 157 GGGLMENAYQYLK-QFGLETESSYPYTAVEGQCRYNK-QLGVAKVTGFYTVHSGSEVELKNLVGAEGPAAVAVDVE-SDF 233 (310)
T ss_dssp GCCCHHHHHHHHT-TSCBCBTTTSCCCSSCCCCCCCG-GGCCEEEEEEEEECSCCHHHHHHHHHHHCCEEEEECCC-HHH
T ss_pred CCCCHHHHHHHHH-HCCcCchhcCCCCCCCCCccCCC-CCCceEeCeEEEeCCCCHHHHHHHHHhcCCeEEEEecc-hhh
Confidence 9999999999997 66999999999999999998643 33457899999997 689999999986 9999999995 589
Q ss_pred cccCCCeeeC-CCCCCCCccCeEEEEEEeeecCCeeEEEEEcCCCCCCCCCceEEEEeCCCCCCCceeeeeeeceeeecC
Q 043774 271 QLYTSGIYNG-DCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPIKES 349 (485)
Q Consensus 271 ~~Y~sGIy~~-~c~~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~ri~r~~~~~~~~CgI~~~~~yp~~~~ 349 (485)
++|++|||.. .|+. ..++|||+|||||+++|++|||||||||++|||+|||||+|+. .|.|||+++++||+...
T Consensus 234 ~~Y~~Gvy~~~~c~~--~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~---~n~Cgi~~~~~~p~~~~ 308 (310)
T 2o6x_A 234 MMYRSGIYQSQTCSP--LRVNHAVLAVGYGTQGGTDYWIVKNSWGLSWGERGYIRMVRNR---GNMCGIASLASLPMVAR 308 (310)
T ss_dssp HTEEEEEECCSSCCT--TCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSS---SSGGGTTTSEEEEEEEE
T ss_pred hhCCCceecCCCCCC--CCCCEEEEEEEEeccCCceEEEEEeCCCCccCCCcEEEEEcCC---CCcCCccceeeEEEeec
Confidence 9999999985 4764 3679999999999999999999999999999999999999985 26899999999998753
No 9
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1
Probab=100.00 E-value=1.2e-73 Score=575.88 Aligned_cols=290 Identities=30% Similarity=0.505 Sum_probs=246.4
Q ss_pred HHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhcCCCCCeEEecccCCCCCHHHHHHHHhhccccccccccCCcccc
Q 043774 41 LFQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVEKKNNPGGHVVGLNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSN 120 (485)
Q Consensus 41 ~F~~f~~~~~k~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~~~s~~~g~N~FsDlt~eEf~~~~~~~~~~~~~~~~~~~~~~ 120 (485)
+|++|+++|+|+|.+.+|+.+|+.||++|+++|++ |++ |+|+|+|||.|||++++++................
T Consensus 7 ~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~-N~~------g~N~F~Dlt~eEf~~~~~~~~~~~~~~~~~~~~~~ 79 (312)
T 1xkg_A 7 TFEEYKKAFNKSYATFEDEEAARKNFLESVKYVQS-NGG------AINHLSDLSLDEFKNRFLMSAEAFEHLKTQFDLNA 79 (312)
T ss_dssp SHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHH-HCC------CCCTTTTSCHHHHHHHHSBCHHHHHHHHHHHC---
T ss_pred HHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHh-ccC------CCCcccCCCHHHHHHHhcCCCCccccccCCccccc
Confidence 59999999999999989999999999999999999 852 99999999999999977663211100000000000
Q ss_pred c-cccccCCCCCCceeccCCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHhCCCcccChhHhhhccCCC-CCCCCCchH
Q 043774 121 L-HKTVQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTS-YGCDGGYMD 198 (485)
Q Consensus 121 ~-~~~~~~~~lP~s~DwR~~g~vtpVkdQg~CGsCwAfA~~~~lE~~~~i~~~~~~~LS~Q~l~dC~~~~-~gC~GG~~~ 198 (485)
. .......+||++||||++|+|+||||||.||||||||++++||++++|++++++.||+|+|+||+ + .||+||++.
T Consensus 80 ~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~--~~~GC~GG~~~ 157 (312)
T 1xkg_A 80 ETNACSINGNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRDQSLDLAEQELVDCA--SQHGCHGDTIP 157 (312)
T ss_dssp --CBCCCCSCCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHT--CSSTTBCCCHH
T ss_pred ccccccccccCCCccccccCCCcCCccccCCCCccHHHHHHHHHHHHHHHHhCCCCCcCHHHHHhcc--CCCCCCCCCHH
Confidence 0 00000127999999999999999999999999999999999999999999999999999999998 4 899999999
Q ss_pred HHHHHHHHcCCcCCCCccccCCCCCCccCCccCcceEEecceeecC-CCHHHHHHHHHc--CCeEEEEeccCc-cccccC
Q 043774 199 YAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVE-PSDSALLCAAVQ--QPISVGMVGSAS-DFQLYT 274 (485)
Q Consensus 199 ~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~-~~~~~l~~al~~--gPV~v~i~~~~~-~f~~Y~ 274 (485)
.|++|+.+ +||++|++|||.+.++.|. . .....++|++|..++ .++++|+++|++ |||+|+|++... +|++|+
T Consensus 158 ~a~~yi~~-~Gi~~e~~yPY~~~~~~C~-~-~~~~~~~i~~y~~v~~~~~~~ik~al~~~~GPV~v~i~~~~~~~f~~Y~ 234 (312)
T 1xkg_A 158 RGIEYIQH-NGVVQESYYRYVAREQSCR-R-PNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHYD 234 (312)
T ss_dssp HHHHHHHH-HCEEBGGGSCCCSSCCCCC-C-CSSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHHHTCC
T ss_pred HHHHHHHH-cCCCccccCCccCCCCCCC-C-CCCceEEEeeEEEeCCCCHHHHHHHHHhcCCCEEEEEEecccccccccC
Confidence 99999988 5999999999999999998 3 334567899999998 689999999986 999999999643 899999
Q ss_pred CCeeeC-CCCCCCCccCeEEEEEEeeecCCeeEEEEEcCCCCCCCCCceEEEEeCCCCCCCceeeeeeeceeeec
Q 043774 275 SGIYNG-DCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPIKE 348 (485)
Q Consensus 275 sGIy~~-~c~~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~ri~r~~~~~~~~CgI~~~~~yp~~~ 348 (485)
+|||.. .|+.. .. +|||+|||||+++|++|||||||||++|||+|||||+|+. |.|||++.++||+..
T Consensus 235 ~GVy~~~~c~~~-~~-~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~----n~CgI~~~~~~~~~~ 303 (312)
T 1xkg_A 235 GRTIIQRDNGYQ-PN-YHAVNIVGYSNAQGVDYWIVRNSWDTNWGDNGYGYFAANI----DLMMIEEYPYVVILG 303 (312)
T ss_dssp SSSCBCCCCSSC-CE-EEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTTCCEEEECT
T ss_pred CcEEcCCCCCCC-cC-ceEEEEEEEeccCCceEEEEEeCCCCcccCCcEEEEEcCC----CcccccceeEEeecc
Confidence 999986 47511 25 9999999999999999999999999999999999999983 699999999999865
No 10
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C*
Probab=100.00 E-value=2.2e-66 Score=543.54 Aligned_cols=282 Identities=30% Similarity=0.538 Sum_probs=182.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCeEEe-cccCCCCCHHHHHHHHhhccccccccccCCccccccccccCCCCCCcee
Q 043774 57 EEAERRFRNFKNNLEYVVEKKNNPGGHVVG-LNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSNLHKTVQSCEAPSSLD 135 (485)
Q Consensus 57 ~E~~~R~~iF~~Nl~~I~~~N~~~~s~~~g-~N~FsDlt~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~s~D 135 (485)
.|+.+|++||++|+++|++||+.+.+|+++ +|+|+|||.|||++++++........... . ..........+||++||
T Consensus 135 ~~~~~R~~if~~N~~~I~~~N~~~~~~~~~~~n~faDlT~eEf~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~lP~s~D 212 (441)
T 3pdf_A 135 SQEKYSNRLYKYDHNFVKAINAIQKSWTATTYMEYETLTLGDMIRRSGGHSRKIPRPKPA-P-LTAEIQQKILFLPTSWD 212 (441)
T ss_dssp -------------------------------------------------------------------------CCCSCEE
T ss_pred hhHHHHHHHHHHHHHHHHHHHccCCceEeecccccccCCHHHHHHHhCCCcccccccccC-c-cccccccccccCCCCEE
Confidence 566899999999999999999977899998 89999999999999887643211100000 0 00000112347999999
Q ss_pred ccCCC---CCCcccCCCCCcchHHHHHHHHHHHHHHHHhCCCc--ccChhHhhhccCCCCCCCCCchHHH-HHHHHHcCC
Q 043774 136 WRKRG---IVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLI--SLSEQELVDCDTTSYGCDGGYMDYA-FEWVINNGG 209 (485)
Q Consensus 136 wR~~g---~vtpVkdQg~CGsCwAfA~~~~lE~~~~i~~~~~~--~LS~Q~l~dC~~~~~gC~GG~~~~a-~~~~~~~~G 209 (485)
||+++ +|+||||||.||||||||++++||++++|++++.+ .||+|+|+||+..+.||+||++..+ ++|+.++ |
T Consensus 213 wR~~~g~~~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~~~LSeQ~LvdC~~~~~GC~GG~~~~aa~~yi~~~-G 291 (441)
T 3pdf_A 213 WRNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSQYAQGCEGGFPYLIAGKYAQDF-G 291 (441)
T ss_dssp TTCBTTBCCSCCCCBCTTSBCHHHHHHHHHHHHHHHHHHTTSCCCCBCHHHHHHHCTTSCTTBCCCHHHHTTHHHHHT-C
T ss_pred CCcCCCCCccCcccccCCCchHHHHHHHHHHHHHHHHhccCCCccccCHHHHHhhccCCCCCCCCchhHHHHHHHHhc-C
Confidence 99964 89999999999999999999999999999999765 4999999999988899999999987 8999776 9
Q ss_pred cCCCCccccCCCCCCccCCccCcceEEecceeecC-----CCHHHHHHHHH-cCCeEEEEeccCccccccCCCeeeCCCC
Q 043774 210 IDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVE-----PSDSALLCAAV-QQPISVGMVGSASDFQLYTSGIYNGDCS 283 (485)
Q Consensus 210 i~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~-----~~~~~l~~al~-~gPV~v~i~~~~~~f~~Y~sGIy~~~c~ 283 (485)
|++|++|||.+.++.|..... ...+.+.+|..+. .++++|+++|+ +|||+|+|++. .+|++|++|||..++.
T Consensus 292 i~tE~~yPY~~~~~~C~~~~~-~~~~~~~~y~~v~~~~~~~~e~~ik~al~~~GPVsvai~a~-~~F~~Y~sGVy~~~~~ 369 (441)
T 3pdf_A 292 LVEEACFPYTGTDSPCKMKED-CFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVY-DDFLHYKKGIYHHTGL 369 (441)
T ss_dssp BCBGGGSCCCSSCCCSCCCSS-CCCBCEEEEEETTSSTTCCCHHHHHHHHHHHCCEEEEECCC-GGGGGCCSSEECCC--
T ss_pred CCcHHHeeecccCCCCCCccc-cceeeeccEEEeCCccCCCcHHHHHHHHHHCCCeEEEEEec-ccccccCCceEecCCC
Confidence 999999999999999986432 2334566676664 57899998887 59999999994 7999999999986532
Q ss_pred CC----CCccCeEEEEEEeeec--CCeeEEEEEcCCCCCCCCCceEEEEeCCCCCCCceeeeeeeceeee
Q 043774 284 ND----PYYIDHAVLIVGYGSE--NGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPIK 347 (485)
Q Consensus 284 ~~----~~~~~HaV~iVGyg~~--~g~~yWivkNSWG~~WGe~GY~ri~r~~~~~~~~CgI~~~~~yp~~ 347 (485)
.. ...++|||+|||||++ +|++|||||||||++|||+|||||+|+. |.|||++++++++.
T Consensus 370 ~~~~~~~~~~~HaV~iVGyG~~~~~G~~YWIVkNSWG~~WGe~GYfri~rg~----n~CGI~s~~~a~~P 435 (441)
T 3pdf_A 370 RDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGT----DECAIESIAVAATP 435 (441)
T ss_dssp -CCCCCCCCCCEEEEEEEEEECTTTCCEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTSCCEEEEE
T ss_pred CcccCCCCcCCeEEEEEEecccCCCCceEEEEEcCCCCCcCCCeEEEEEcCC----CccCCCCceEEeec
Confidence 21 1358999999999974 7899999999999999999999999986 58999999888753
No 11
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A*
Probab=100.00 E-value=2.5e-66 Score=525.52 Aligned_cols=277 Identities=25% Similarity=0.458 Sum_probs=185.6
Q ss_pred HHHHHHHHHHHHHHHHhcC-CCCCeEEecc-cCCCCCHHHHHHHHhhcccccccc-ccCCccccccccccCCCCCCceec
Q 043774 60 ERRFRNFKNNLEYVVEKKN-NPGGHVVGLN-KFADMSNEEFREIYLKKIQKPIGK-AIGNAKSNLHKTVQSCEAPSSLDW 136 (485)
Q Consensus 60 ~~R~~iF~~Nl~~I~~~N~-~~~s~~~g~N-~FsDlt~eEf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~lP~s~Dw 136 (485)
.+|+..+.-|.++|++||+ .+.+|++|+| +|+|||.|||++++ +....+... .... ..........+||++|||
T Consensus 2 ~~~~~a~~~~~~~i~~~N~~~~~~~~~~~n~~f~dlt~eE~~~~~-g~~~~~~~~~~~~~--~~~~~~~~~~~lP~s~Dw 78 (325)
T 3hhi_A 2 LVAEDAPVLSKAFVDRVNRLNRGIWKAKYDGVMQNITLREAKRLN-GVIKKNNNASILPK--RRFTEEEARAPLPSSFDS 78 (325)
T ss_dssp -------------------------------------------------------CCSCB--CCCCHHHHHCCCCSCEEH
T ss_pred CcccccccccHHHHHHHHhCCCCceEEecccccccCCHHHHHHHh-CCCCCCcccccccC--ccccccccccCCCCcEeh
Confidence 4677888889999999998 4589999999 89999999998864 433211110 0000 001111112479999999
Q ss_pred cCC----CCCCcccCCCCCcchHHHHHHHHHHHHHHHHhCC-CcccChhHhhhccC-CCCCCCCCchHHHHHHHHHcCCc
Q 043774 137 RKR----GIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGD-LISLSEQELVDCDT-TSYGCDGGYMDYAFEWVINNGGI 210 (485)
Q Consensus 137 R~~----g~vtpVkdQg~CGsCwAfA~~~~lE~~~~i~~~~-~~~LS~Q~l~dC~~-~~~gC~GG~~~~a~~~~~~~~Gi 210 (485)
|++ |.|+||||||.||||||||++++||++++|+++. ++.||+|+|+||+. .+.||+||++..||+|++++ ||
T Consensus 79 R~~w~~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~~~~~~~LSeQ~LvdC~~~~~~GC~GG~~~~A~~yi~~~-Gi 157 (325)
T 3hhi_A 79 AEAWPNCPTIPQIADQSACGSCWAVAAASAMSDRFCTMGGVQDVHISAGDLLACCSDCGDGCNGGDPDRAWAYFSST-GL 157 (325)
T ss_dssp HHHSTTCTTTTCCCBCCSSBCHHHHHHHHHHHHHHHHTSSCSSCCBCHHHHHHHCGGGBCTTBCBCHHHHHHHHHHT-CB
T ss_pred hHhcCCCCccccccCCCCccccHHHHHHHHHHHHHHHHhCCCccccCHHHHHHhccCCCCCCCCCCHHHHHHHHHHh-CC
Confidence 998 8999999999999999999999999999999997 89999999999987 57899999999999999887 99
Q ss_pred CCCCccccC-CC----------CCCccC---------------CccCcceEEecceeecCCCHHHHHHHHH-cCCeEEEE
Q 043774 211 DTESDYPYT-GV----------DGTCNI---------------TKEETKVVSIDGYKDVEPSDSALLCAAV-QQPISVGM 263 (485)
Q Consensus 211 ~~e~~yPY~-~~----------~~~C~~---------------~~~~~~~~~i~~y~~v~~~~~~l~~al~-~gPV~v~i 263 (485)
++|++|||. +. .+.|.. .....+.+.+.+|. + .++++|+++|+ +|||+|+|
T Consensus 158 ~~e~~yPY~~~~c~~~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~y~-v-~~~~~i~~~i~~~GPV~v~i 235 (325)
T 3hhi_A 158 VSDYCQPYPFPHCSHHSKSKNGYPPCSQFNFDTPKCDYTCDDPTIPVVNYRSWTSYA-L-QGEDDYMRELFFRGPFEVAF 235 (325)
T ss_dssp CBTTTSCCSSCCCBSSSCCTTCCCBGGGCCCCCCCCCSSCSSTTSCCCCBCEEEEEE-E-CSHHHHHHHHHHHCCEEEEE
T ss_pred CcccccCCccccccccccccccCCCCCCcccCCcchhhcccccccccceEEeecceE-e-CCHHHHHHHHHHCCCEEEEE
Confidence 999999998 32 255651 00112334566776 5 78999999987 59999999
Q ss_pred eccCccccccCCCeeeCCCCCCCCccCeEEEEEEeeecCCeeEEEEEcCCCCCCCCCceEEEEeCCCCCCCceeeeeeec
Q 043774 264 VGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMAS 343 (485)
Q Consensus 264 ~~~~~~f~~Y~sGIy~~~c~~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~ri~r~~~~~~~~CgI~~~~~ 343 (485)
++. .+|++|++|||...++. ..++|||+|||||+++|++|||||||||++|||+|||||+|+. |.|||+++++
T Consensus 236 ~~~-~~f~~Y~~GVy~~~~~~--~~~~HaV~iVGyG~~~g~~YWivkNSWG~~WGe~GY~~i~rg~----n~CGI~~~~~ 308 (325)
T 3hhi_A 236 DVY-EDFIAYNSGVYHHVSGQ--YLGGHAVRLVGWGTSNGVPYWKIANSWNTEWGMDGYFLIRRGS----SECGIEDGGS 308 (325)
T ss_dssp EEE-HHHHTCCSSEECCCSCC--EEEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTSCEE
T ss_pred Eec-cccccccCceecCCCCC--CCCCEEEEEEEEEecCCceEEEEEeCCCCCcccCCEEEEEcCC----CeecCccceE
Confidence 994 78999999999876654 3569999999999999999999999999999999999999985 6999999999
Q ss_pred eeeecC
Q 043774 344 YPIKES 349 (485)
Q Consensus 344 yp~~~~ 349 (485)
+++...
T Consensus 309 ~g~p~~ 314 (325)
T 3hhi_A 309 AGIPLA 314 (325)
T ss_dssp EEEEC-
T ss_pred EeecCC
Confidence 876553
No 12
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1
Probab=100.00 E-value=8.5e-63 Score=474.88 Aligned_cols=217 Identities=54% Similarity=1.058 Sum_probs=198.7
Q ss_pred CCCCceeccCCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHhCCCcccChhHhhhccCCCCCCCCCchHHHHHHHHHcC
Q 043774 129 EAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNG 208 (485)
Q Consensus 129 ~lP~s~DwR~~g~vtpVkdQg~CGsCwAfA~~~~lE~~~~i~~~~~~~LS~Q~l~dC~~~~~gC~GG~~~~a~~~~~~~~ 208 (485)
+||++||||++|+|+||||||.||||||||++++||+++++++++++.||+|+|+||+..+.||+||++..|++|+++++
T Consensus 2 ~lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~y~~~~~ 81 (221)
T 1cqd_A 2 DLPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTTANHGCRGGWMNPAFQFIVNNG 81 (221)
T ss_dssp -CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHHT
T ss_pred CCCCcCcCCCCCCcCCcccCCCCccHHHHHHHHHHHHHHHHhcCCeeeeccceeEECCCCCCCCCCCCHHHHHHHHHHhC
Confidence 58999999999999999999999999999999999999999999999999999999997789999999999999999888
Q ss_pred CcCCCCccccCCCCCCccCCccCcceEEecceeecC-CCHHHHHHHHHcCCeEEEEeccCccccccCCCeeeCCCCCCCC
Q 043774 209 GIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVE-PSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPY 287 (485)
Q Consensus 209 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~-~~~~~l~~al~~gPV~v~i~~~~~~f~~Y~sGIy~~~c~~~~~ 287 (485)
||++|++|||.+.++.|..... ...++|++|..++ +++++|+++|++|||+|+|++...+|++|++|||+..|+.
T Consensus 82 Gi~~e~~yPY~~~~~~C~~~~~-~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~~~~--- 157 (221)
T 1cqd_A 82 GINSEETYPYRGQDGICNSTVN-APVVSIDSYENVPSHNEQSLQKAVANQPVSVTMDAAGRDFQLYRSGIFTGSCNI--- 157 (221)
T ss_dssp SBCBTTTSCCCSSCCCCCSSSC-CCSBCCSEEEECCSSCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCCCCC---
T ss_pred CccccccCCccCCCCCcCCCCC-CceEEeccEEEeCCchHHHHHHHHHhCCEEEEEeccCcccccccCccccCCCCC---
Confidence 9999999999999999986432 4556889999887 5799999999999999999986578999999999987765
Q ss_pred ccCeEEEEEEeeecCCeeEEEEEcCCCCCCCCCceEEEEeCCCCCCCceeeeeeeceeeecC
Q 043774 288 YIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPIKES 349 (485)
Q Consensus 288 ~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~ri~r~~~~~~~~CgI~~~~~yp~~~~ 349 (485)
.++|||+|||||+++|++|||||||||++|||+|||||+|+.+...|.|||+++++||+...
T Consensus 158 ~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~~~ 219 (221)
T 1cqd_A 158 SANHALTVVGYGTENDKDFWIVKNSWGKNWGESGYIRAERNIENPDGKCGITRFASYPVKKG 219 (221)
T ss_dssp CCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEECC-
T ss_pred cCCeEEEEEEEcccCCCcEEEEEeCCCCCcccCCEEEEEcCCCCCCcccceeeeeeEEEecC
Confidence 58999999999999999999999999999999999999999755568999999999998753
No 13
>3p5u_A Actinidin; SAD, cysteine proteinases, hydrolase; 1.50A {Actinidia arguta} SCOP: d.3.1.1 PDB: 3p5v_A 3p5w_A 3p5x_A 1aec_A* 2act_A
Probab=100.00 E-value=5.8e-63 Score=475.77 Aligned_cols=215 Identities=55% Similarity=1.043 Sum_probs=197.8
Q ss_pred CCCceeccCCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHhCCCcccChhHhhhccCC--CCCCCCCchHHHHHHHHHc
Q 043774 130 APSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SYGCDGGYMDYAFEWVINN 207 (485)
Q Consensus 130 lP~s~DwR~~g~vtpVkdQg~CGsCwAfA~~~~lE~~~~i~~~~~~~LS~Q~l~dC~~~--~~gC~GG~~~~a~~~~~~~ 207 (485)
||++||||++|+|+||||||.||||||||++++||++++++++++++||+|+|+||+.. +.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~i~~~~~~~LS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~ 80 (220)
T 3p5u_A 1 LPDYVDWRSSGAVVDIKDQGQCGSAWAFSTIAAVEGINKIATGDLISLSEQELVDCGRTQNTRGCDGGFMTDGFQFIINN 80 (220)
T ss_dssp CCSCEETTTTTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCCSSCCTTBCCCHHHHHHHHHHH
T ss_pred CCCCCcCCcCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHhHcEECCCCCCCCCCCCCCHHHHHHHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999985 8899999999999999998
Q ss_pred CCcCCCCccccCCCCCCccCCccCcceEEecceeecC-CCHHHHHHHHHcCCeEEEEeccCccccccCCCeeeCCCCCCC
Q 043774 208 GGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVE-PSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDP 286 (485)
Q Consensus 208 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~-~~~~~l~~al~~gPV~v~i~~~~~~f~~Y~sGIy~~~c~~~~ 286 (485)
+||++|++|||.+.++.|.........+++++|..++ +++++|+++|++|||+|+|++...+|++|++|||+.+|+.
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~l~~~l~~GPV~v~~~~~~~~f~~Y~~Giy~~~~~~-- 158 (220)
T 3p5u_A 81 GGINTEANYPYTAEEGQCNLDLQQEKYVSIDTYENVPYNNEWALQTAVAYQPVSVALEAAGYNFQHYSSGIFTGPCGT-- 158 (220)
T ss_dssp TCBCBTTTSCCCSSCCCCCHHHHTCCSBCCCEEEECCTTCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCCCCC--
T ss_pred CCcCcccccccccCCCCcCcCCCCCceEEEccEEEeCCCcHHHHHHHHhcCCEEEEEecCchhhccccCceECCCCCC--
Confidence 8999999999999999997544444456788999887 7899999999889999999986678999999999987765
Q ss_pred CccCeEEEEEEeeecCCeeEEEEEcCCCCCCCCCceEEEEeCCCCCCCceeeeeeeceeeec
Q 043774 287 YYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPIKE 348 (485)
Q Consensus 287 ~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~ri~r~~~~~~~~CgI~~~~~yp~~~ 348 (485)
.++|||+|||||+++|++|||||||||++|||+|||||+|+.+ ..|.|||+++++||+..
T Consensus 159 -~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~-~~~~Cgi~~~~~~p~~~ 218 (220)
T 3p5u_A 159 -AVDHAVTIVGYGTEGGIDYWIVKNSWGTTWGEEGYMRIQRNVG-GVGQCGIAKKASYPVKY 218 (220)
T ss_dssp -SCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECCCC-TTCGGGTTSSCEEEECS
T ss_pred -ccceEEEEEEEecCCCceEEEEECCCCCCcccCCEEEEECCCC-CCCccCcccccceEEEe
Confidence 4799999999999999999999999999999999999999975 35699999999999864
No 14
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A*
Probab=100.00 E-value=1.5e-62 Score=471.60 Aligned_cols=214 Identities=47% Similarity=0.925 Sum_probs=197.1
Q ss_pred CCCceeccCCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHhCCCcccChhHhhhccCCCCCCCCCchHHHHHHHHHcCC
Q 043774 130 APSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGG 209 (485)
Q Consensus 130 lP~s~DwR~~g~vtpVkdQg~CGsCwAfA~~~~lE~~~~i~~~~~~~LS~Q~l~dC~~~~~gC~GG~~~~a~~~~~~~~G 209 (485)
||++||||++|+|+||||||.||||||||++++||+++++++++.+.||+|+|+||+..+.||+||++..|++|+.++ |
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~yi~~~-G 79 (216)
T 1ppo_A 1 LPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERRSHGCKGGYPPYALEYVAKN-G 79 (216)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCSSSCTTBCCCHHHHHHHHHHH-C
T ss_pred CCCcCcCCCCCCCCCCccCCcCccHHHHHHHHHHHHHHHHccCCceecCHHHHHhccCCCCCCCCCCHHHHHHHHHHh-C
Confidence 699999999999999999999999999999999999999999999999999999999778899999999999999888 7
Q ss_pred cCCCCccccCCCCCCccCCccCcceEEecceeecC-CCHHHHHHHHHcCCeEEEEeccCccccccCCCeeeCCCCCCCCc
Q 043774 210 IDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVE-PSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYY 288 (485)
Q Consensus 210 i~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~-~~~~~l~~al~~gPV~v~i~~~~~~f~~Y~sGIy~~~c~~~~~~ 288 (485)
|++|++|||.+.++.|.........++|++|..++ +++++|+++|++|||+|+|++...+|++|++|||+.+|+. .
T Consensus 80 i~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~~~~~~~~f~~Y~~Giy~~~~~~---~ 156 (216)
T 1ppo_A 80 IHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCGT---K 156 (216)
T ss_dssp BCBTTTSCCCSSCCCCCGGGCCSCCBCCCEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHHCCSSEECCSCCS---C
T ss_pred cCccccCCccCCCCCcCCCCCCCceEEeccEEEECCCCHHHHHHHHHhCCEEEEEecCChhhhhcCCceECCCCCC---C
Confidence 99999999999999998654334567889999887 6899999999999999999986578999999999887865 4
Q ss_pred cCeEEEEEEeeecCCeeEEEEEcCCCCCCCCCceEEEEeCCCCCCCceeeeeeeceeee
Q 043774 289 IDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPIK 347 (485)
Q Consensus 289 ~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~ri~r~~~~~~~~CgI~~~~~yp~~ 347 (485)
++|||+|||||+++|++|||||||||++|||+|||||+|+.+...|.|||+++++||+.
T Consensus 157 ~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~n~Cgi~~~~~~p~~ 215 (216)
T 1ppo_A 157 VDHAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTK 215 (216)
T ss_dssp CCEEEEEEEEEEETTEEEEEEECSBCSSSTBTTEEEEECCCSSSSCGGGTTSCCEEEEC
T ss_pred CCEEEEEEEeeccCCccEEEEEeCCCCCcccCcEEEEEcCCCCCCCcCccccceeeEee
Confidence 79999999999999999999999999999999999999997655689999999999985
No 15
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E*
Probab=100.00 E-value=2e-62 Score=471.38 Aligned_cols=215 Identities=47% Similarity=0.952 Sum_probs=197.6
Q ss_pred CCCceeccCCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHhCCCcccChhHhhhccCCCCCCCCCchHHHHHHHHHcCC
Q 043774 130 APSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGG 209 (485)
Q Consensus 130 lP~s~DwR~~g~vtpVkdQg~CGsCwAfA~~~~lE~~~~i~~~~~~~LS~Q~l~dC~~~~~gC~GG~~~~a~~~~~~~~G 209 (485)
||++||||++|+|+||||||.||||||||++++||+++++++++.+.||+|+|+||+..+.||+||++..|++|+.++ |
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~~~~~~-G 79 (218)
T 1yal_A 1 YPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDKHSYGCKGGYQTTSLQYVANN-G 79 (218)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHH-C
T ss_pred CCCcCcCCCCCCCCCCccCccchhHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhcCCCCCCCCCCHHHHHHHHHHc-C
Confidence 699999999999999999999999999999999999999999999999999999999778999999999999999888 7
Q ss_pred cCCCCccccCCCCCCccCCccCcceEEecceeecC-CCHHHHHHHHHcCCeEEEEeccCccccccCCCeeeCCCCCCCCc
Q 043774 210 IDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVE-PSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYY 288 (485)
Q Consensus 210 i~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~-~~~~~l~~al~~gPV~v~i~~~~~~f~~Y~sGIy~~~c~~~~~~ 288 (485)
|++|++|||.+.++.|.........++|++|..++ +++++|+++|++|||+|+|++...+|++|++|||+.+|+. .
T Consensus 80 i~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~~~~---~ 156 (218)
T 1yal_A 80 VHTSKVYPYQAKQYKCRATDKPGPKVKITGYKRVPSNCETSFLGALANQPLSVLVEAGGKPFQLYKSGVFDGPCGT---K 156 (218)
T ss_dssp BCBTTTSCCCSSCCCCCGGGCCSCCBCCSEEEECCSSBHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCSCCS---C
T ss_pred CCccccccccCCCCCcccCcCCCceEEEeeEEEeCCCCHHHHHHHHHhCCEEEEEeccchhccccCCceECCCCCC---C
Confidence 99999999999989998654334567889999887 6899999999999999999986578999999999887765 4
Q ss_pred cCeEEEEEEeeecCCeeEEEEEcCCCCCCCCCceEEEEeCCCCCCCceeeeeeeceeeec
Q 043774 289 IDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPIKE 348 (485)
Q Consensus 289 ~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~ri~r~~~~~~~~CgI~~~~~yp~~~ 348 (485)
++|||+|||||+++|++|||||||||++|||+|||||+|+.+...|.|||+++++||+..
T Consensus 157 ~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~ 216 (218)
T 1yal_A 157 LDHAVTAVGYGTSDGKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQGTCGVYKSSYYPFKG 216 (218)
T ss_dssp CCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECCCSBSCCGGGTTSSCEEEECC
T ss_pred CCEEEEEEEeeccCCccEEEEEeCCCCCcccCcEEEEECCCCCCCCccccccceeeEEEe
Confidence 799999999999999999999999999999999999999975556899999999999864
No 16
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1
Probab=100.00 E-value=2.3e-62 Score=469.89 Aligned_cols=213 Identities=50% Similarity=1.036 Sum_probs=196.4
Q ss_pred CCCceeccCCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHhCCCcccChhHhhhccCCCCCCCCCchHHHHHHHHHcCC
Q 043774 130 APSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGG 209 (485)
Q Consensus 130 lP~s~DwR~~g~vtpVkdQg~CGsCwAfA~~~~lE~~~~i~~~~~~~LS~Q~l~dC~~~~~gC~GG~~~~a~~~~~~~~G 209 (485)
||++||||++|+|+||||||.||||||||++++||+++++++++.+.||+|+|+||+..+.||+||++..|++|+.+++|
T Consensus 1 lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~~e~~~~i~~g~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~~~~~~~G 80 (215)
T 1iwd_A 1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDTASHGCNGGWMNNAFQYIITNGG 80 (215)
T ss_dssp CCSCEEGGGGTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHHTC
T ss_pred CCCcEeCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHhcCCccccChhHeEECcCCCCCCCCCCHHHHHHHHHHhCC
Confidence 69999999999999999999999999999999999999999999999999999999977889999999999999988889
Q ss_pred cCCCCccccCCCCCCccCCccCcceEEecceeecC-CCHHHHHHHHHcCCeEEEEeccCccccccCCCeeeCCCCCCCCc
Q 043774 210 IDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVE-PSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYY 288 (485)
Q Consensus 210 i~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~-~~~~~l~~al~~gPV~v~i~~~~~~f~~Y~sGIy~~~c~~~~~~ 288 (485)
|++|++|||.+.++.|.... ...++|++|..++ .++++|+++|++|||+|+|++...+|++|++|||+..|+. .
T Consensus 81 i~~e~~yPY~~~~~~C~~~~--~~~~~i~~~~~v~~~~~~~ik~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~c~~---~ 155 (215)
T 1iwd_A 81 IDTQQNYPYSAVQGSCKPYR--LRVVSINGFQRVTRNNESALQSAVASQPVSVTVEAAGAPFQHYSSGIFTGPCGT---A 155 (215)
T ss_dssp BCBTTTSCCCSSCCCCCTTC--CCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCC---C
T ss_pred cccccccCccCCCCCCCCCC--CceEEeCcEEEeCCCcHHHHHHHHHhCCEEEEEecCCcchhhcCCceECCCCCC---c
Confidence 99999999999999998653 3556788998887 6899999999999999999986558999999999987764 5
Q ss_pred cCeEEEEEEeeecCCeeEEEEEcCCCCCCCCCceEEEEeCCCCCCCceeeeeeeceeee
Q 043774 289 IDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPIK 347 (485)
Q Consensus 289 ~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~ri~r~~~~~~~~CgI~~~~~yp~~ 347 (485)
++|||+|||||+++|++|||||||||++|||+|||||+|+.+...|.|||+++++||+.
T Consensus 156 ~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 214 (215)
T 1iwd_A 156 QNHGVVIVGYGTQSGKNYWIVRNSWGQNWGNQGYIWMERNVASSAGLCGIAQLPSYPTK 214 (215)
T ss_dssp CCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred CCEEEEEEEEeccCCccEEEEEeCCCCCcCCCcEEEEEcCCCCCCCCCCccccceeeee
Confidence 79999999999999999999999999999999999999997555589999999999975
No 17
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0
Probab=100.00 E-value=1.2e-62 Score=474.24 Aligned_cols=217 Identities=60% Similarity=1.112 Sum_probs=194.3
Q ss_pred CCCceeccCCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHhCCCcccChhHhhhccCCCCCCCCCchHHHHHHHHHcCC
Q 043774 130 APSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGG 209 (485)
Q Consensus 130 lP~s~DwR~~g~vtpVkdQg~CGsCwAfA~~~~lE~~~~i~~~~~~~LS~Q~l~dC~~~~~gC~GG~~~~a~~~~~~~~G 209 (485)
||++||||++|+|+||||||.||||||||++++||+++++++++++.||+|+|+||+..+.||+||++..|++|+.+++|
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGSCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~~~~~~~G 80 (222)
T 3u8e_A 1 APASIDWRKKGAVTSVKDQGACGMCWAFGATGAIEGIDAITTGRLISVSEQQIVDCDTXXXXXXGGDADDAFRWVITNGG 80 (222)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSCSSCTTTTHHHHHHHHHHHHHSCCCCBCHHHHHHHCC------CCCHHHHHHHHHHHTC
T ss_pred CCCcCcCCcCCCCCCcccCCCCccHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhccCcccccCCCCHHHHHHHHHHcCC
Confidence 79999999999999999999999999999999999999999999999999999999988899999999999999999889
Q ss_pred cCCCCccccCCCCCCccCCccCcceEEecceeecCCCHHHHHHHHHcCCeEEEEeccCccccccCC-CeeeC-CCCCCCC
Q 043774 210 IDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQPISVGMVGSASDFQLYTS-GIYNG-DCSNDPY 287 (485)
Q Consensus 210 i~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~l~~al~~gPV~v~i~~~~~~f~~Y~s-GIy~~-~c~~~~~ 287 (485)
|++|++|||.+.++.|...... .++|++|..++.++++|+++|++|||+|+|++...+|++|++ |||+. .|...+.
T Consensus 81 i~~e~~yPY~~~~~~C~~~~~~--~~~i~~~~~v~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~~Giy~~~~~~~~~~ 158 (222)
T 3u8e_A 81 IASDANYPYTGVDGTCDLNKPI--AARIDGYTNVPNSSSALLDAVAKQPVSVNIYTSSTSFQLYTGPGIFAGSSCSDDPA 158 (222)
T ss_dssp BCBTTTSCCCSSCCCCCCCSCC--CBCCCEEEECCSCHHHHHHHHHHSCEEEEECCCSHHHHTCCCSSCBCCTTCCCCGG
T ss_pred ccchhcCCCcccCCccccCCCC--eEEEccEEEeCCcHHHHHHHHhCCCEEEEEEecChhhhcEeCCceECCCcccCCCC
Confidence 9999999999999999865433 678899999988899999999999999999996568999999 99987 6765444
Q ss_pred ccCeEEEEEEeeecC-CeeEEEEEcCCCCCCCCCceEEEEeCCCCCCCceeeeeeeceeeec
Q 043774 288 YIDHAVLIVGYGSEN-GEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPIKE 348 (485)
Q Consensus 288 ~~~HaV~iVGyg~~~-g~~yWivkNSWG~~WGe~GY~ri~r~~~~~~~~CgI~~~~~yp~~~ 348 (485)
.++|||+|||||+++ |++|||||||||++|||+|||||+|+.+...|.|||+++++||+..
T Consensus 159 ~~~HaV~iVGyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~g~Cgi~~~~~~p~~~ 220 (222)
T 3u8e_A 159 TVDHTVLIVGYGSNGTNADYWIVKNSWGTEWGIDGYILIRRNTNRPDGVCAIDAWGSYPTKS 220 (222)
T ss_dssp GCCEEEEEEEEEESSTTCEEEEEECSBCTTSTBTTEEEEECSCSCTTCGGGTTSSCEEEECC
T ss_pred cCCEEEEEEEEeecCCCCcEEEEECCCCCCcccCCEEEEEcCCCCCCCcCCccccceEEEEe
Confidence 689999999999988 9999999999999999999999999986566799999999999753
No 18
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1
Probab=100.00 E-value=2.7e-62 Score=473.80 Aligned_cols=219 Identities=55% Similarity=1.031 Sum_probs=199.7
Q ss_pred CCCCceeccCCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHhCCCcccChhHhhhccC-CCCCCCCCchHHHHHHHHHc
Q 043774 129 EAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDT-TSYGCDGGYMDYAFEWVINN 207 (485)
Q Consensus 129 ~lP~s~DwR~~g~vtpVkdQg~CGsCwAfA~~~~lE~~~~i~~~~~~~LS~Q~l~dC~~-~~~gC~GG~~~~a~~~~~~~ 207 (485)
+||++||||++|+|+||||||.||||||||++++||+++++++++.+.||+|+|+||+. .+.||+||++..|++|+.++
T Consensus 1 ~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~~gC~GG~~~~a~~y~~~~ 80 (229)
T 1s4v_A 1 TVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQNQGCNGGLMDYAFEFIKQR 80 (229)
T ss_dssp CCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCSSCCTTBCBCHHHHHHHHHHH
T ss_pred CCCCCEeCCCCCCCCCCccCccchHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhCCCCCCCCCCCCHHHHHHHHHHh
Confidence 48999999999999999999999999999999999999999999999999999999996 58899999999999999888
Q ss_pred CCcCCCCccccCCCCCCccCCccCcceEEecceeecC-CCHHHHHHHHHcCCeEEEEeccCccccccCCCeeeCCCCCCC
Q 043774 208 GGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVE-PSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDP 286 (485)
Q Consensus 208 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~-~~~~~l~~al~~gPV~v~i~~~~~~f~~Y~sGIy~~~c~~~~ 286 (485)
+||++|++|||.+..+.|.........++|++|..++ +++++|+++|++|||+|+|++...+|++|++|||+.+|+.
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~c~~-- 158 (229)
T 1s4v_A 81 GGITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVPENDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGSCGT-- 158 (229)
T ss_dssp TCBCBTTTSCCCSSCCCCCHHHHTCCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCC--
T ss_pred CCccccccCCccCCCCCCCCCCCCCcEEEeeeEEEeCCccHHHHHHHHhcCCEEEEEEeCcHHHhhCCCcEECCCCCC--
Confidence 8999999999999989997543334556789998887 6899999999999999999986678999999999887765
Q ss_pred CccCeEEEEEEeeecC-CeeEEEEEcCCCCCCCCCceEEEEeCCCCCCCceeeeeeeceeeecCC
Q 043774 287 YYIDHAVLIVGYGSEN-GEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPIKESY 350 (485)
Q Consensus 287 ~~~~HaV~iVGyg~~~-g~~yWivkNSWG~~WGe~GY~ri~r~~~~~~~~CgI~~~~~yp~~~~~ 350 (485)
.++|||+|||||+++ |++|||||||||++|||+|||||+|+.+...|.|||+++++||+....
T Consensus 159 -~~~HaV~iVGyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~~~~ 222 (229)
T 1s4v_A 159 -ELDHGVAIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPIKKSS 222 (229)
T ss_dssp -CCCEEEEEEEEEECTTSCEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEECCSS
T ss_pred -CCCeEEEEEEeccccCCCCEEEEEeCCCCCccCCcEEEEEcCCCCCCCcCcccccceeeEecCC
Confidence 479999999999886 999999999999999999999999997655689999999999987654
No 19
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A
Probab=100.00 E-value=1.7e-62 Score=496.23 Aligned_cols=262 Identities=27% Similarity=0.494 Sum_probs=209.3
Q ss_pred HHHHHHHhcCCCCCeEEecccCCCCCHHHHHHHHhhccccccccccCCccccccccccCCCCCCceeccCC----CCCCc
Q 043774 69 NLEYVVEKKNNPGGHVVGLNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSNLHKTVQSCEAPSSLDWRKR----GIVTP 144 (485)
Q Consensus 69 Nl~~I~~~N~~~~s~~~g~N~FsDlt~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~s~DwR~~----g~vtp 144 (485)
+.++|++||+.+.+|++|+| |+|++.||++. +++....+.... .... .....+||++||||++ +.|+|
T Consensus 11 ~~~~i~~~N~~~~~~~~~~n-f~~~~~e~~~~-~lg~~~~~~~~~-----~~~~-~~~~~~lP~s~DwR~~~~~c~~vtp 82 (317)
T 3pbh_A 11 SDELVNYVNKRNTTWQAGHN-FYNVDMSYLKR-LCGTFLGGPKPP-----QRVM-FTEDLKLPASFDAREQWPQCPTIKE 82 (317)
T ss_dssp CHHHHHHHHHHTCSEEECCC-CSSCCHHHHHH-TCCBCTTCCCCS-----EEEC-CCSCCCCCSSEEHHHHCTTCGGGTC
T ss_pred cHHHHHHHHCCCCCeEEeec-cccCCHHHHHH-HcCCCCCccccC-----cccc-cccccCCCCCEechhccCCCCCcCC
Confidence 45789999987889999999 99888777654 556543221110 0111 1112489999999998 68999
Q ss_pred ccCCCCCcchHHHHHHHHHHHHHHHHhCC--CcccChhHhhhccC--CCCCCCCCchHHHHHHHHHcCCcCCCCcc----
Q 043774 145 VKDQGSCGSCWSFSTTGAIEGINALVTGD--LISLSEQELVDCDT--TSYGCDGGYMDYAFEWVINNGGIDTESDY---- 216 (485)
Q Consensus 145 VkdQg~CGsCwAfA~~~~lE~~~~i~~~~--~~~LS~Q~l~dC~~--~~~gC~GG~~~~a~~~~~~~~Gi~~e~~y---- 216 (485)
|||||.||||||||++++||++++|+++. ++.||+|+|+||+. .+.||+||++..||+|++++ ||++|.+|
T Consensus 83 VkdQg~CGSCWAFsa~~ale~~~~i~~~~~~~~~LSeq~LvdC~~~~~~~GC~GG~~~~A~~yi~~~-Gi~te~~Y~~~~ 161 (317)
T 3pbh_A 83 IRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRK-GLVSGGLYESHV 161 (317)
T ss_dssp CCBCCSSCCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHSCTTTBCGGGCBCHHHHHHHHHHT-CEEBBCSTTCCC
T ss_pred ccccCCccchHHHHHHHHHHHHHHHHhCCCCcccCCHHHHHHhccccCCCCCCCCCHHHHHHHHHHh-CCCcchhccCCC
Confidence 99999999999999999999999999875 79999999999986 47899999999999999888 99999998
Q ss_pred ---ccCC---------CCCCccCCccC----------cc------eEEecceeecCCCHHHHHHHHH-cCCeEEEEeccC
Q 043774 217 ---PYTG---------VDGTCNITKEE----------TK------VVSIDGYKDVEPSDSALLCAAV-QQPISVGMVGSA 267 (485)
Q Consensus 217 ---PY~~---------~~~~C~~~~~~----------~~------~~~i~~y~~v~~~~~~l~~al~-~gPV~v~i~~~~ 267 (485)
||.. ..+.|...... .. .........++.++++|+++|+ +|||+|+|++.
T Consensus 162 ~c~PY~~~~c~~~~~~~~~~C~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~v~~~e~~i~~~i~~~GPV~v~i~~~- 240 (317)
T 3pbh_A 162 GCRPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAFSVY- 240 (317)
T ss_dssp BSSCCCSCCCCCCCTTCCSCCCSCCCCCCCCCSCCSSCCSCGGGSEECBCCCEEECSCHHHHHHHHHHHCCEEEEEEEE-
T ss_pred CCcCcccCcccccccCcCCCCCCcCCCCcccccccCCCccceeeeeeeeeecccCCcHHHHHHHHHHHCCCEEEEEEec-
Confidence 9983 34555421000 00 0111222356678999999887 59999999994
Q ss_pred ccccccCCCeeeCCCCCCCCccCeEEEEEEeeecCCeeEEEEEcCCCCCCCCCceEEEEeCCCCCCCceeeeeeeceee
Q 043774 268 SDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPI 346 (485)
Q Consensus 268 ~~f~~Y~sGIy~~~c~~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~ri~r~~~~~~~~CgI~~~~~yp~ 346 (485)
.+|++|++|||...|+. ..++|||+|||||+++|++|||||||||++|||+|||||+|+. |.|||++.++..+
T Consensus 241 ~~f~~Y~~GVy~~~~~~--~~~~HaV~iVGyG~~~g~~YWivkNSWG~~WGe~GY~ri~rg~----n~CgI~~~~~a~~ 313 (317)
T 3pbh_A 241 SDFLLYKSGVYQHVTGE--MMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKILRGQ----DHCGIESEVVAGI 313 (317)
T ss_dssp GGGGGEEEEEECCCSCC--EEEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTTSCEECC
T ss_pred ccccCCCCcEEccCCCC--CCCCEEEEEEEEEEeCCeeEEEEEcCCCCCcCCCcEEEEEcCC----CcccCCCceEeee
Confidence 79999999999987654 3569999999999999999999999999999999999999986 5899999887654
No 20
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare}
Probab=100.00 E-value=5.1e-62 Score=479.92 Aligned_cols=221 Identities=51% Similarity=1.004 Sum_probs=200.3
Q ss_pred CCCCceeccCCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHhCCCcccChhHhhhccC-CCCCCCCCchHHHHHHHHHc
Q 043774 129 EAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDT-TSYGCDGGYMDYAFEWVINN 207 (485)
Q Consensus 129 ~lP~s~DwR~~g~vtpVkdQg~CGsCwAfA~~~~lE~~~~i~~~~~~~LS~Q~l~dC~~-~~~gC~GG~~~~a~~~~~~~ 207 (485)
+||++||||++|+|+||||||.||||||||++++||++++|++++.+.||+|+|+||+. .+.||+||++..||+|+.++
T Consensus 3 ~lP~~~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~lvdC~~~~~~GC~GG~~~~a~~yi~~~ 82 (262)
T 2fo5_A 3 DLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKNN 82 (262)
T ss_dssp CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCSSCCGGGCBCHHHHHHHHHHT
T ss_pred CCCCcccCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhcCCCCCCCCCCCHHHHHHHHHHc
Confidence 68999999999999999999999999999999999999999999999999999999997 68999999999999999888
Q ss_pred CCcCCCCccccCCCCCCccCCc--cCcc-eEEecceeecC-CCHHHHHHHHHcCCeEEEEeccCccccccCCCeeeCCCC
Q 043774 208 GGIDTESDYPYTGVDGTCNITK--EETK-VVSIDGYKDVE-PSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCS 283 (485)
Q Consensus 208 ~Gi~~e~~yPY~~~~~~C~~~~--~~~~-~~~i~~y~~v~-~~~~~l~~al~~gPV~v~i~~~~~~f~~Y~sGIy~~~c~ 283 (485)
+||++|++|||.+.++.|.... .... .++|++|..++ +++++|+++|++|||+|+|++...+|++|++|||+..|+
T Consensus 83 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~i~~y~~v~~~~e~~ik~al~~GPV~v~i~~~~~~f~~Y~sGVy~~~c~ 162 (262)
T 2fo5_A 83 GGLITEAAYPYRAARGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVANQPVSVAVEASGKAFMFYSEGVFTGECG 162 (262)
T ss_dssp TCEEBTTTSCCCSSCCCCCHHHHHHHCCCEECCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCC
T ss_pred CCcCchhcCCCcCccCccCCcccccCCceeEEeceEEEcCCchHHHHHHHHHhCCEEEEEecChHHHhccCCceECCCCC
Confidence 8999999999999999998543 1334 67899999887 689999999999999999998657899999999998887
Q ss_pred CCCCccCeEEEEEEeeec-CCeeEEEEEcCCCCCCCCCceEEEEeCCCCCCCceeeeeeeceeeecCCCC
Q 043774 284 NDPYYIDHAVLIVGYGSE-NGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPIKESYAP 352 (485)
Q Consensus 284 ~~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~ri~r~~~~~~~~CgI~~~~~yp~~~~~~~ 352 (485)
. .++|||+|||||++ +|++|||||||||++|||+|||||+|+.+...|.|||+++++||+.....+
T Consensus 163 ~---~~~HaV~IVGyg~~~~G~~YWivkNSWG~~WGe~GY~ri~r~~n~~~~~CgI~~~~~~p~~~~~~~ 229 (262)
T 2fo5_A 163 T---ELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAMEASYPVKTYSKP 229 (262)
T ss_dssp C---CCCEEEEEEEEEECTTSCEEEEEECSBCTTSTBTTEEEEESSCSCTTCGGGTTTSCEEEECCC---
T ss_pred C---cCCEEEEEEEEcccCCCceEEEEEeCCCCCCCCCeEEEEEcCCCCCCCccceeeeeeEEEecCCCC
Confidence 5 47999999999987 599999999999999999999999999876678999999999999876554
No 21
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ...
Probab=100.00 E-value=3.1e-61 Score=461.10 Aligned_cols=210 Identities=48% Similarity=0.923 Sum_probs=192.4
Q ss_pred CCCceeccCCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHhCCCcccChhHhhhccCCCCCCCCCchHHHHHHHHHcCC
Q 043774 130 APSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGG 209 (485)
Q Consensus 130 lP~s~DwR~~g~vtpVkdQg~CGsCwAfA~~~~lE~~~~i~~~~~~~LS~Q~l~dC~~~~~gC~GG~~~~a~~~~~~~~G 209 (485)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+..+.||+||++..|++|+.++ |
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~CGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~yi~~~-G 79 (212)
T 2cio_A 1 IPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNQYSEQELLDCDRRSYGCNGGYPWSALQLVAQY-G 79 (212)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHT-C
T ss_pred CCCcccCCCCCCCCCCccCCccchHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhCCCCCCCCCCCHHHHHHHHHHh-C
Confidence 699999999999999999999999999999999999999999999999999999999778999999999999999887 7
Q ss_pred cCCCCccccCCCCCCccCCccCcceEEecceeecC-CCHHHHHHHHHcCCeEEEEeccCccccccCCCeeeCCCCCCCCc
Q 043774 210 IDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVE-PSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYY 288 (485)
Q Consensus 210 i~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~-~~~~~l~~al~~gPV~v~i~~~~~~f~~Y~sGIy~~~c~~~~~~ 288 (485)
|++|++|||.+.++.|.........+++++|..++ .++++|+++|++|||+|+|++...+|++|++|||+.+|+. .
T Consensus 80 i~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~~~~---~ 156 (212)
T 2cio_A 80 IHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGIFVGPCGN---K 156 (212)
T ss_dssp BCBTTTSCCCSSCCCCCTTTTCSCSBCCSEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCS---C
T ss_pred cCcccccCCcCCCCCcCCCCCCCceEEEeeEEEeCCccHHHHHHHHHhCCEEEEEeccCcchhhcCCceecCCCCC---C
Confidence 99999999999999998654334557889998887 6899999999999999999986558999999999887765 5
Q ss_pred cCeEEEEEEeeecCCeeEEEEEcCCCCCCCCCceEEEEeCCCCCCCceeeeeeeceeee
Q 043774 289 IDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPIK 347 (485)
Q Consensus 289 ~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~ri~r~~~~~~~~CgI~~~~~yp~~ 347 (485)
++|||+|||||+ +|||||||||++|||+|||||+|+.+...|.|||+++++||+.
T Consensus 157 ~~HaV~iVGyg~----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 211 (212)
T 2cio_A 157 VDHAVAAVGYGP----NYILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPVK 211 (212)
T ss_dssp CCEEEEEEEEET----TEEEEECSBCTTSTBTTEEEEECSSSCTTCGGGTTSCCEEEEC
T ss_pred CCEEEEEEEecC----CeEEEEeCCCCCcccCcEEEEEcCCCCCCCccCcccceeEEEe
Confidence 799999999998 8999999999999999999999997555689999999999985
No 22
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1
Probab=100.00 E-value=2.4e-61 Score=462.25 Aligned_cols=211 Identities=46% Similarity=0.931 Sum_probs=194.1
Q ss_pred CCCceeccCCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHhCCCcccChhHhhhccCCCCCCCCCchHHHHHHHHHcCC
Q 043774 130 APSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGG 209 (485)
Q Consensus 130 lP~s~DwR~~g~vtpVkdQg~CGsCwAfA~~~~lE~~~~i~~~~~~~LS~Q~l~dC~~~~~gC~GG~~~~a~~~~~~~~G 209 (485)
||++||||++|+|+||||||.||||||||++++||++++++++++++||+|+|+||+..+.||+||++..|++|+.++ |
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~~~~~~-G 79 (213)
T 3ioq_A 1 IPTSIDWRQKGAVTPVRNQGGCGSCWTFSSVAAVEGINKIVTGQLLSLSEQELLDCERRSYGCRGGFPLYALQYVANS-G 79 (213)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHH-C
T ss_pred CCCCCCcccCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCcccCHHHhhhhcCCCCCCCCCCHHHHHHHHHHc-C
Confidence 699999999999999999999999999999999999999999999999999999999888999999999999999988 9
Q ss_pred cCCCCccccCCCCCCccCCccCcceEEecceeecC-CCHHHHHHHHHcCCeEEEEeccCccccccCCCeeeCCCCCCCCc
Q 043774 210 IDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVE-PSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYY 288 (485)
Q Consensus 210 i~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~-~~~~~l~~al~~gPV~v~i~~~~~~f~~Y~sGIy~~~c~~~~~~ 288 (485)
|++|++|||.+..+.|.........+++.+|..++ ++++++++++++|||+|+|++..++|++|++|||+..|.. .
T Consensus 80 i~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~~~~~~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~---~ 156 (213)
T 3ioq_A 80 IHLRQYYPYEGVQRQCRASQAKGPKVKTDGVGRVPRNNEQALIQRIAIQPVSIVVEAKGRAFQNYRGGIFAGPCGT---S 156 (213)
T ss_dssp EEBGGGSCCCSSCCCCCGGGCCSCEECCCEEEECCSSCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCSCCS---C
T ss_pred CCchhccCcCCCCCCCCCCccCCceEEeccEEEeCCchHHHHHHHHHhCCEEEEEEechhhhhhccCCeEcCCCCC---c
Confidence 99999999999999998654455677899999997 6777888888899999999996578999999999886654 6
Q ss_pred cCeEEEEEEeeecCCeeEEEEEcCCCCCCCCCceEEEEeCCCCCCCceeeeeeeceeeec
Q 043774 289 IDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPIKE 348 (485)
Q Consensus 289 ~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~ri~r~~~~~~~~CgI~~~~~yp~~~ 348 (485)
++|||+|||||+ +|||||||||++|||+|||||+|+.+...|.|||+++++||+..
T Consensus 157 ~~HaV~iVGyg~----~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~~ 212 (213)
T 3ioq_A 157 IDHAVAAVGYGN----DYILIKNSWGTGWGEGGYIRIKRGSGNPQGACGVLSDSVFPTKN 212 (213)
T ss_dssp CCEEEEEEEEET----TEEEEECSBCTTSTBTTEEEEESSCSSTTCGGGTTSCCEEEECC
T ss_pred cCceEEEEecCC----CeEEEECCCCCCcccCCeEEEEcCCCCCCCcccccCcceEeEec
Confidence 799999999986 79999999999999999999999986566899999999999863
No 23
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ...
Probab=100.00 E-value=4.5e-61 Score=460.98 Aligned_cols=212 Identities=45% Similarity=0.926 Sum_probs=194.4
Q ss_pred CCCceeccCCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHhCCCcccChhHhhhccCCCCCCCCCchHHHHHHHHHcCC
Q 043774 130 APSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGG 209 (485)
Q Consensus 130 lP~s~DwR~~g~vtpVkdQg~CGsCwAfA~~~~lE~~~~i~~~~~~~LS~Q~l~dC~~~~~gC~GG~~~~a~~~~~~~~G 209 (485)
||++||||++|+|+||||||.||||||||++++||+++++++++++.||+|+|+||+..+.||+||++..|++|+++++|
T Consensus 1 lP~~~Dwr~~~~v~pvkdQg~cGsCWAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~gC~GG~~~~a~~~~~~~~G 80 (215)
T 3kwz_A 1 APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRG 80 (215)
T ss_dssp CTTCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHHTC
T ss_pred CCCCCccCcCCCCCCcccCCCCcHHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcCCCCCCCCCCHHHHHHHHHHhCC
Confidence 79999999999999999999999999999999999999999999999999999999988899999999999999998889
Q ss_pred cCCCCccccCCCCCCccCCccCcceEEecceeecC-CCHHHHHHHHHc-CCeEEEEeccCccccccCCCeeeC-CCCCCC
Q 043774 210 IDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVE-PSDSALLCAAVQ-QPISVGMVGSASDFQLYTSGIYNG-DCSNDP 286 (485)
Q Consensus 210 i~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~-~~~~~l~~al~~-gPV~v~i~~~~~~f~~Y~sGIy~~-~c~~~~ 286 (485)
|++|++|||.+.++.|.... .....++.+|..++ .++++||++|++ |||+|+|++..++|++|++|||.. .|..
T Consensus 81 i~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~-- 157 (215)
T 3kwz_A 81 IDSEDAYPYVGQEESCMYNP-TGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNS-- 157 (215)
T ss_dssp EEBTTTSCCCSSCCCCCCCG-GGEEECCCCEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTCCT--
T ss_pred ccccccCCCccCCCccccCC-CCceeEecceEEeCCCCHHHHHHHHHHCCCEEEEEeechhhhhcccCCeECCCCCCC--
Confidence 99999999999999998543 34567889999998 589999999986 999999999657899999999975 4543
Q ss_pred CccCeEEEEEEeeecCCeeEEEEEcCCCCCCCCCceEEEEeCCCCCCCceeeeeeeceeee
Q 043774 287 YYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPIK 347 (485)
Q Consensus 287 ~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~ri~r~~~~~~~~CgI~~~~~yp~~ 347 (485)
..++|||+|||||+++|++|||||||||++|||+|||||+|+.+ |.|||+++++||+.
T Consensus 158 ~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WG~~Gy~~i~r~~~---n~Cgi~~~~~~p~~ 215 (215)
T 3kwz_A 158 DNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKN---NACGIANLASFPKM 215 (215)
T ss_dssp TCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEESSSS---SGGGTTSSCEEECC
T ss_pred ChhhCEEEEEEEeccCCceEEEEECCcCcccccCCEEEEecCCC---CccCcCCceeeeeC
Confidence 36899999999999999999999999999999999999999863 69999999999973
No 24
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A*
Probab=100.00 E-value=5.4e-61 Score=469.27 Aligned_cols=218 Identities=52% Similarity=0.981 Sum_probs=196.3
Q ss_pred CCCCceeccCCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHhCCCcccChhHhhhccCCCCCCCCCchHHHHHHHHHcC
Q 043774 129 EAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNG 208 (485)
Q Consensus 129 ~lP~s~DwR~~g~vtpVkdQg~CGsCwAfA~~~~lE~~~~i~~~~~~~LS~Q~l~dC~~~~~gC~GG~~~~a~~~~~~~~ 208 (485)
+||++||||++|+|+||||||.||||||||++++||+++++++++.+.||+|+|+||+..+.||+||++..|++|+.+++
T Consensus 1 ~lP~~~DwR~~g~vtpVkdQg~CGsCWAfa~~~~lE~~~~i~~g~~~~LS~q~lvdC~~~~~gC~GG~~~~a~~y~~~~~ 80 (246)
T 2b1m_A 1 DAPESWDWSKKGVITKVKFQGQCGSGWAFSATGAIEAAHAIATGNLVSLSEQELIDCVDESEGCYNGWHYQSFEWVVKHG 80 (246)
T ss_dssp -CCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSBTTTBCCHHHHHHHHHHTT
T ss_pred CCCCcCCCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhcCCCCCCCCCCHHHHHHHHHHhC
Confidence 48999999999999999999999999999999999999999999999999999999997788999999999999998888
Q ss_pred CcCCCCccccCCCCCCccCCccCcceEEecce---eecC-CCHHHHHHHHHc----CCeEEEEeccCccccccCCCeeeC
Q 043774 209 GIDTESDYPYTGVDGTCNITKEETKVVSIDGY---KDVE-PSDSALLCAAVQ----QPISVGMVGSASDFQLYTSGIYNG 280 (485)
Q Consensus 209 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y---~~v~-~~~~~l~~al~~----gPV~v~i~~~~~~f~~Y~sGIy~~ 280 (485)
||++|++|||.+.++.|.... ....++|++| ..++ .++++|+++|++ |||+|+|++ .+|++|++|||+.
T Consensus 81 Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~y~~~~~v~~~~~~~ik~~l~~~~~~GPV~v~i~~--~~f~~Y~~Giy~~ 157 (246)
T 2b1m_A 81 GIASEADYPYKARDGKCKANE-IQDKVTIDNYGVQILSNESTESEAESSLQSFVLEQPISVSIDA--KDFHFYSGGIYDG 157 (246)
T ss_dssp CBCBTTTSCCCSSCCCCCGGG-CCCCBCCSEEEEEECCTTSCHHHHHHHHHHHHHHSCEEEEECC--TTGGGCCSSEECC
T ss_pred CcCccccccccCCCCcCcCCC-CCCceeEcCcceeeecCCChHHHHHHHHHhhccCCCEEEEEEc--chhhcccceeecC
Confidence 999999999999999998642 2345678888 7787 689999999987 999999998 6899999999987
Q ss_pred -CCCCCCCccCeEEEEEEeeecCCeeEEEEEcCCCCCCCCCceEEEEeCCCCCCCceeeeeeeceeeecCC
Q 043774 281 -DCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPIKESY 350 (485)
Q Consensus 281 -~c~~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~ri~r~~~~~~~~CgI~~~~~yp~~~~~ 350 (485)
.|+.. ..++|||+|||||+++|++|||||||||++|||+|||||+|+.+...|.|||+++++||+....
T Consensus 158 ~~c~~~-~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~n~CgI~~~~~~p~~~~~ 227 (246)
T 2b1m_A 158 GNCSSP-YGINHFVLIVGYGSEDGVDYWIAKNSWGEDWGIDGYIRIQRNTGNLLGVCGMNYFASYPIIEKS 227 (246)
T ss_dssp TTCCSS-CCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECCSSCTTCGGGTTSEEEEEECCC-
T ss_pred CCCCCC-CcCceEEEEEEEeccCCceEEEEEeCCCCcccCCcEEEEEcCCCCCCccccccceeeEEEecCC
Confidence 57652 1379999999999999999999999999999999999999997545589999999999997654
No 25
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana}
Probab=100.00 E-value=5.3e-61 Score=460.11 Aligned_cols=211 Identities=47% Similarity=0.938 Sum_probs=194.4
Q ss_pred CCCceeccCCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHhCCCcccChhHhhhccCCCCCCCCCchHHHHHHHHHcCC
Q 043774 130 APSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGG 209 (485)
Q Consensus 130 lP~s~DwR~~g~vtpVkdQg~CGsCwAfA~~~~lE~~~~i~~~~~~~LS~Q~l~dC~~~~~gC~GG~~~~a~~~~~~~~G 209 (485)
||++||||++|+|+||||||.||||||||++++||+++++++++.+.||+|+|+||+..+.||+||++..|++|+.++ |
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~y~~~~-G 79 (214)
T 2bdz_A 1 YPESIDWREKGAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCERRSHGCDGGYQTTSLQYVVDN-G 79 (214)
T ss_dssp CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCBCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHH-C
T ss_pred CCCcEeCCCCCCCCCCccCCCCccHHHHHhHHHHHHHHHHhcCCccccCHHHHHhhcCCCCCCCCCCHHHHHHHHHHh-C
Confidence 699999999999999999999999999999999999999999999999999999999778899999999999999988 9
Q ss_pred cCCCCccccCCCCCCccCCccCcceEEecceeecC-CCHHHHHHHHHcCCeEEEEeccCccccccCCCeeeCCCCCCCCc
Q 043774 210 IDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVE-PSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYY 288 (485)
Q Consensus 210 i~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~-~~~~~l~~al~~gPV~v~i~~~~~~f~~Y~sGIy~~~c~~~~~~ 288 (485)
|++|++|||.+..+.|.........++|++|..++ +++++|+++|++|||+|+|++...+|++|++|||+.+|+. .
T Consensus 80 i~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~gPV~v~i~~~~~~f~~Y~~Giy~~~~~~---~ 156 (214)
T 2bdz_A 80 VHTEREYPYEKKQGRCRAKDKKGPKVYITGYKYVPANDEISLIQAIANQPVSVVTDSRGRGFQFYKGGIYEGPCGT---N 156 (214)
T ss_dssp EEBTTTSCCCSSCCCCCTTTCCSCEECCCEEEEECSSBHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCSCCS---C
T ss_pred CCccccCCCCCCCCCCCCCCCCCceeeecCEEEeCCCcHHHHHHHHHhCCEEEEEeeChhHhhcccCceecCCCCC---C
Confidence 99999999999989998654445577899999887 6889999999999999999986578999999999987765 5
Q ss_pred cCeEEEEEEeeecCCeeEEEEEcCCCCCCCCCceEEEEeCCCCCCCceeeeeeeceeeec
Q 043774 289 IDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPIKE 348 (485)
Q Consensus 289 ~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~ri~r~~~~~~~~CgI~~~~~yp~~~ 348 (485)
++|||+|||||+ +|||||||||++|||+|||||+|+.+...|.|||+++++||+..
T Consensus 157 ~~HaV~iVGyg~----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~ 212 (214)
T 2bdz_A 157 TDHAVTAVGYGK----TYLLLKNSWGPNWGEKGYIRIKRASGRSKGTCGVYTSSFFPIKG 212 (214)
T ss_dssp CCEEEEEEEECS----SEEEEECSBCTTSTBTTEEEEECCCSBSSCGGGTTSCEEEEECC
T ss_pred CCeEEEEEEcCC----CeEEEEeCCCCCcccCCEEEEEcCCCCCCCcccccccceEEEec
Confidence 799999999997 89999999999999999999999975556899999999999864
No 26
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A*
Probab=100.00 E-value=6.5e-61 Score=457.57 Aligned_cols=206 Identities=52% Similarity=1.027 Sum_probs=189.8
Q ss_pred CCCceeccCCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHhCCCcccChhHhhhccCCCCCCCCCchHHHHHHHHHcCC
Q 043774 130 APSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGG 209 (485)
Q Consensus 130 lP~s~DwR~~g~vtpVkdQg~CGsCwAfA~~~~lE~~~~i~~~~~~~LS~Q~l~dC~~~~~gC~GG~~~~a~~~~~~~~G 209 (485)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+..+.||+||++..|++|+.+++|
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~y~~~~~G 80 (208)
T 1o0e_A 1 LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDKKNHGCLGGAFVFAYQYIINNGG 80 (208)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHHTC
T ss_pred CCCcCcCCCCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCceecCHHHhhhhcCCCCCCCCCCHHHHHHHHHHhCC
Confidence 69999999999999999999999999999999999999999999999999999999977899999999999999988889
Q ss_pred cCCCCccccCCCCCCccCCccCcceEEecceeecC-CCHHHHHHHHHcCCeEEEEeccCccccccCCCeeeCCCCCCCCc
Q 043774 210 IDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVE-PSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYY 288 (485)
Q Consensus 210 i~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~-~~~~~l~~al~~gPV~v~i~~~~~~f~~Y~sGIy~~~c~~~~~~ 288 (485)
|++|++|||.+.++.|+. ....+++++|..++ +++++|+++|++|||+|+|++...+|++|++|||+.+|+. .
T Consensus 81 i~~e~~yPY~~~~~~C~~---~~~~~~i~~~~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~c~~---~ 154 (208)
T 1o0e_A 81 IDTQANYPYKAVQGPCQA---ASKVVSIDGYNGVPFCNEXALKQAVAVQPSTVAIDASSAQFQQYSSGIFSGPCGT---K 154 (208)
T ss_dssp BCBTTTSCCCSSCCCCCC---CCCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCS---C
T ss_pred cCcccccCccCCCCcCCC---CCceEEeCeEEEeCCCCHHHHHHHHHhCCEEEEEEccCcccccccCceECCCCCC---c
Confidence 999999999999999975 23456788998887 6899999999999999999986558999999999887765 5
Q ss_pred cCeEEEEEEeeecCCeeEEEEEcCCCCCCCCCceEEEEeCCCCCCCceeeeeeeceeee
Q 043774 289 IDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPIK 347 (485)
Q Consensus 289 ~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~ri~r~~~~~~~~CgI~~~~~yp~~ 347 (485)
++|||+|||||+ +|||||||||++|||+|||||+|+.+ .|.|||+++++||+.
T Consensus 155 ~~HaV~iVGyg~----~yWivkNSWG~~WGe~Gy~~i~~~~~--~~~Cgi~~~~~~p~~ 207 (208)
T 1o0e_A 155 LNHGVTIVGYQA----NYWIVRNSWGRYWGEKGYIRMLRVGG--CGLCGIARLPYYPTK 207 (208)
T ss_dssp CCEEEEEEEECS----SEEEEECSBCTTSTBTTEEEEECCST--TCGGGTTSSCEEEEC
T ss_pred CCEEEEEEEeCC----CeEEEEcCCCCcccCCcEEEEEcCCC--CCcCCCcccceeeec
Confidence 799999999997 89999999999999999999999863 479999999999985
No 27
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ...
Probab=100.00 E-value=1.9e-60 Score=457.54 Aligned_cols=211 Identities=43% Similarity=0.908 Sum_probs=193.1
Q ss_pred CCCceeccCCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHhCCCcccChhHhhhcc-C--CCCCCCCCchHHHHHHHHH
Q 043774 130 APSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCD-T--TSYGCDGGYMDYAFEWVIN 206 (485)
Q Consensus 130 lP~s~DwR~~g~vtpVkdQg~CGsCwAfA~~~~lE~~~~i~~~~~~~LS~Q~l~dC~-~--~~~gC~GG~~~~a~~~~~~ 206 (485)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+ . .+.||+||++..|++|+++
T Consensus 2 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~~gC~GG~~~~a~~~~~~ 81 (218)
T 3ovx_A 2 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIID 81 (218)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGGTCCGGGCCCHHHHHHHHHH
T ss_pred CCCCCCcccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHcCCccccCHHHheeccCCcCCCCCCCCCCHHHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999999999 3 5889999999999999988
Q ss_pred cCCcCCCCccccCCCCCCccCCccCcceEEecceeecC-CCHHHHHHHHHc-CCeEEEEeccCccccccCCCeeeCC-CC
Q 043774 207 NGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVE-PSDSALLCAAVQ-QPISVGMVGSASDFQLYTSGIYNGD-CS 283 (485)
Q Consensus 207 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~-~~~~~l~~al~~-gPV~v~i~~~~~~f~~Y~sGIy~~~-c~ 283 (485)
++||++|++|||.+.++.|.... .....++.+|..++ .++++||++|++ |||+|+|++...+|++|++|||..+ |.
T Consensus 82 ~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~ 160 (218)
T 3ovx_A 82 NKGIDSDASYPYKAMDQKCQYDS-KYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCT 160 (218)
T ss_dssp HTCEEBTTTSCCCSSCCCCCCCG-GGEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHHCCSSEECCTTCC
T ss_pred hCCcCcccccCccCCCCcccCCC-ccceeeeccEEEeCCCCHHHHHHHHHhcCCEEEEEEecchhhhcccCceecCCCCC
Confidence 77999999999999999998643 34567888999887 689999999986 9999999997678999999999864 53
Q ss_pred CCCCccCeEEEEEEeeecCCeeEEEEEcCCCCCCCCCceEEEEeCCCCCCCceeeeeeeceeee
Q 043774 284 NDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPIK 347 (485)
Q Consensus 284 ~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~ri~r~~~~~~~~CgI~~~~~yp~~ 347 (485)
..++|||+|||||+++|++|||||||||++|||+|||||+|+. .|.|||+++++||+.
T Consensus 161 ---~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~---~n~cgi~~~~~~p~~ 218 (218)
T 3ovx_A 161 ---QNVNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNK---GNHCGIASFPSYPEI 218 (218)
T ss_dssp ---SCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSS---SSGGGTTTSCEEEEC
T ss_pred ---cccCcEEEEEEEeccCCceEEEEECCCCCccccCCEEEEecCC---CCcccccCceeeeeC
Confidence 3789999999999999999999999999999999999999985 379999999999974
No 28
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ...
Probab=100.00 E-value=3.2e-60 Score=456.66 Aligned_cols=212 Identities=48% Similarity=0.967 Sum_probs=192.3
Q ss_pred CCCceeccCCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHhCCCcccChhHhhhccC--CCCCCCCCchHHHHHHHHHc
Q 043774 130 APSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDT--TSYGCDGGYMDYAFEWVINN 207 (485)
Q Consensus 130 lP~s~DwR~~g~vtpVkdQg~CGsCwAfA~~~~lE~~~~i~~~~~~~LS~Q~l~dC~~--~~~gC~GG~~~~a~~~~~~~ 207 (485)
||++||||++|+|+||||||.||||||||++++||+++++++++.+.||+|+|+||+. .+.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~g~~gC~GG~~~~a~~y~~~~ 80 (220)
T 2xu3_A 1 APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDN 80 (220)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTTTCCTTBCCCHHHHHHHHHHH
T ss_pred CCCcEeCCCCCCCCCCcccCcccHHHHHHhHHHHHHHHHHhcCCceecCHHHHHhhccCCCCCCCCCCCHHHHHHHHHHh
Confidence 6999999999999999999999999999999999999999999999999999999986 37899999999999999766
Q ss_pred CCcCCCCccccCCCCCCccCCccCcceEEecceeecCCCHHHHHHHHHc-CCeEEEEeccCccccccCCCeeeCC-CCCC
Q 043774 208 GGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQ-QPISVGMVGSASDFQLYTSGIYNGD-CSND 285 (485)
Q Consensus 208 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~l~~al~~-gPV~v~i~~~~~~f~~Y~sGIy~~~-c~~~ 285 (485)
.||++|++|||.+.++.|.... ....+++++|..++.++++||++|++ |||+|+|++...+|++|++|||+.+ |+.
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~~~~~ik~~l~~~GPV~v~~~~~~~~f~~Y~~Gvy~~~~c~~- 158 (220)
T 2xu3_A 81 GGLDSEESYPYEATEESCKYNP-KYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSS- 158 (220)
T ss_dssp TCEEBTTTSCCCSSCCCCCCCG-GGEEECCSEEEECCSCHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTCCS-
T ss_pred CCcccccccCCcccCcCccCCC-CCcceeeeeEEEeCCCHHHHHHHHHhcCCEEEEEeecCcccccccceEEcCCCCCC-
Confidence 6999999999999999998643 34567889999888789999999986 9999999986568999999999864 754
Q ss_pred CCccCeEEEEEEee----ecCCeeEEEEEcCCCCCCCCCceEEEEeCCCCCCCceeeeeeeceeee
Q 043774 286 PYYIDHAVLIVGYG----SENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPIK 347 (485)
Q Consensus 286 ~~~~~HaV~iVGyg----~~~g~~yWivkNSWG~~WGe~GY~ri~r~~~~~~~~CgI~~~~~yp~~ 347 (485)
..++|||+||||| +++|++|||||||||++|||+|||||+|+. .|.|||+++++||+.
T Consensus 159 -~~~~HaV~iVGygd~~~~~~g~~yWivkNSWG~~WG~~Gy~~i~~~~---~n~Cgi~~~~~~p~~ 220 (220)
T 2xu3_A 159 -EDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDR---RNHCGIASAASYPTV 220 (220)
T ss_dssp -SCCCEEEEEEEEEECCCSSSCCEEEEEECSBCTTSTBTTEEEEECSS---SSGGGTTTSCEEEEC
T ss_pred -CCCCeEEEEEEcCCccccCCCCcEEEEEeCCCCCcccCcEEEEecCC---CCcCCccccceeeeC
Confidence 3689999999999 677899999999999999999999999985 268999999999973
No 29
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1
Probab=100.00 E-value=2.6e-60 Score=455.43 Aligned_cols=209 Identities=45% Similarity=0.858 Sum_probs=189.9
Q ss_pred CCCceeccCCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHhCCCcccChhHhhhccCCCCCCCCCchHHHHHHHHHcCC
Q 043774 130 APSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGG 209 (485)
Q Consensus 130 lP~s~DwR~~g~vtpVkdQg~CGsCwAfA~~~~lE~~~~i~~~~~~~LS~Q~l~dC~~~~~gC~GG~~~~a~~~~~~~~G 209 (485)
||++||||++|+|+||||||.||||||||++++||++++++++..+.||+|+|+||+..+.||+||++..|++|+.+++|
T Consensus 1 lP~~~DwR~~~~vt~VkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~~i~~~~G 80 (214)
T 1m6d_A 1 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGLPSNAYSAIKNLGG 80 (214)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCSSSCTTBCCCHHHHHHHHHHHTC
T ss_pred CCCcCcCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcC
Confidence 69999999999999999999999999999999999999999999999999999999987889999999999999988889
Q ss_pred cCCCCccccCCCCCCccCCccCcceEEecceeecCCCHHHHHHHHH-cCCeEEEEeccCccccccCCCeeeCC---CCCC
Q 043774 210 IDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAV-QQPISVGMVGSASDFQLYTSGIYNGD---CSND 285 (485)
Q Consensus 210 i~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~l~~al~-~gPV~v~i~~~~~~f~~Y~sGIy~~~---c~~~ 285 (485)
|++|++|||.+....|..... ...+.+.++..++.++++||++|+ +|||+|+|++. .|++|++|||+.. |+.
T Consensus 81 i~~e~~yPY~~~~~~C~~~~~-~~~~~i~~~~~i~~~~~~ik~~l~~~GPV~v~i~~~--~f~~Y~~Giy~~~~~~c~~- 156 (214)
T 1m6d_A 81 LETEDDYSYQGHMQSCQFSAE-KAKVYIQDSVELSQNEQKLAAWLAKRGPISVAINAF--GMQFYRHGISRPLRPLCSP- 156 (214)
T ss_dssp BCBTTTSCCCSSCCCCCCCGG-GCCBCCSEEEECCSCHHHHHHHHHHHCCEEEEECTH--HHHHCCSSEECCCGGGSCT-
T ss_pred cccccCcCcCCCCCcCCCCcc-cceEEecCEEEeChHHHHHHHHHHhCCCEEEEEEec--hhhhcCCceecCCCCcCCC-
Confidence 999999999998899986433 234568888888888999999987 49999999984 5999999999752 543
Q ss_pred CCccCeEEEEEEeeecCCeeEEEEEcCCCCCCCCCceEEEEeCCCCCCCceeeeeeeceeee
Q 043774 286 PYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPIK 347 (485)
Q Consensus 286 ~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~ri~r~~~~~~~~CgI~~~~~yp~~ 347 (485)
..++|||+|||||+++|++|||||||||++|||+|||||+|+. |.|||+++++||+.
T Consensus 157 -~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~----n~Cgi~~~~~~~~~ 213 (214)
T 1m6d_A 157 -WLIDHAVLLVGYGQRSDVPFWAIKNSWGTDWGEKGYYYLHRGS----GACGVNTMASSAVV 213 (214)
T ss_dssp -TCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEESSS----CGGGTTTTCEEEEC
T ss_pred -CcCCEEEEEEEEeecCCcEEEEEEeCCCCCcccCcEEEEEcCC----CccccCceeEEEEe
Confidence 3689999999999999999999999999999999999999985 68999999999975
No 30
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ...
Probab=100.00 E-value=4.8e-60 Score=453.85 Aligned_cols=208 Identities=40% Similarity=0.818 Sum_probs=187.1
Q ss_pred CCCceeccCCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHhCCCcccChhHhhhccCCCCCCCCCchHHHHHHHHHc--
Q 043774 130 APSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINN-- 207 (485)
Q Consensus 130 lP~s~DwR~~g~vtpVkdQg~CGsCwAfA~~~~lE~~~~i~~~~~~~LS~Q~l~dC~~~~~gC~GG~~~~a~~~~~~~-- 207 (485)
||++||||++|+|+||||||.||||||||++++||+++++++++++.||+|+|+||+..+.||+||++..|++|++++
T Consensus 1 lP~~~Dwr~~g~vtpVkdQg~cGsCWAfa~~~ale~~~~i~~~~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~y~~~~~~ 80 (215)
T 3i06_A 1 APAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSGCSGGLMNNAFEWIVQENN 80 (215)
T ss_dssp CCSEEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHTTSCCCCCCHHHHHHHCSSSCGGGCCCHHHHHHHHHHHST
T ss_pred CCCcccCCcCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCccCHHHHhccCCCCCCCCCCCHHHHHHHHHHhcc
Confidence 699999999999999999999999999999999999999999999999999999999888999999999999999875
Q ss_pred CCcCCCCccccCCCC---CCccCCccCcceEEecceeecCCCHHHHHHHHH-cCCeEEEEeccCccccccCCCeeeCCCC
Q 043774 208 GGIDTESDYPYTGVD---GTCNITKEETKVVSIDGYKDVEPSDSALLCAAV-QQPISVGMVGSASDFQLYTSGIYNGDCS 283 (485)
Q Consensus 208 ~Gi~~e~~yPY~~~~---~~C~~~~~~~~~~~i~~y~~v~~~~~~l~~al~-~gPV~v~i~~~~~~f~~Y~sGIy~~~c~ 283 (485)
+|+++|++|||.... ..|.... ....++|++|..++.++++|+++|+ +|||+|+|++ ++|++|++|||+. |.
T Consensus 81 gGi~~e~~yPY~~~~~~~~~C~~~~-~~~~~~i~~~~~v~~~~~~ik~~l~~~gPV~v~~~~--~~f~~Y~~Giy~~-~~ 156 (215)
T 3i06_A 81 GAVYTEDSYPYASGEGISPPCTTSG-HTVGATITGHVELPQDEAQIAAWLAVNGPVAVAVDA--SSWMTYTGGVMTS-CV 156 (215)
T ss_dssp TEEEC-CCSCCCCTTSCCCCCCCSS-CCEEEEEEEEEECCSCHHHHHHHHHHHCCEEEEECC--TTGGGCCSSEECS-CC
T ss_pred ccccccCccCCcCCCCCCCccccCC-cccceEecceEEeCChHHHHHHHHHHCCCEEEEEEc--hHHhcCCCCcccC-CC
Confidence 689999999999654 3687543 3345788999999889999999997 5999999998 4899999999975 43
Q ss_pred CCCCccCeEEEEEEeeecCCeeEEEEEcCCCCCCCCCceEEEEeCCCCCCCceeeeeeeceeee
Q 043774 284 NDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPIK 347 (485)
Q Consensus 284 ~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~ri~r~~~~~~~~CgI~~~~~yp~~ 347 (485)
. ..++|||+|||||+++|++|||||||||++|||+|||||+|+. |.|||+++++||+.
T Consensus 157 ~--~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~rg~----n~cgi~~~~~~~~~ 214 (215)
T 3i06_A 157 S--EQLDHGVLLVGYNDSAAVPYWIIKNSWTTQWGEEGYIRIAKGS----NQCLVKEEASSAVV 214 (215)
T ss_dssp C--SCCCEEEEEEEEESSSSSCEEEEECSBCTTSTBTTEEEEESSS----CGGGTTSSEEEEEE
T ss_pred C--CccCcEEEEEEEeccCCcEEEEEECCCCCCcccCceEEEecCC----CeecCCCceeEEec
Confidence 3 3579999999999999999999999999999999999999985 69999999999975
No 31
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0
Probab=100.00 E-value=1.8e-60 Score=459.56 Aligned_cols=214 Identities=48% Similarity=0.970 Sum_probs=194.7
Q ss_pred CCCCceeccCCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHhCCCcccChhHhhhccCC--CCCCCCCchHHHHHHHHH
Q 043774 129 EAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SYGCDGGYMDYAFEWVIN 206 (485)
Q Consensus 129 ~lP~s~DwR~~g~vtpVkdQg~CGsCwAfA~~~~lE~~~~i~~~~~~~LS~Q~l~dC~~~--~~gC~GG~~~~a~~~~~~ 206 (485)
+||++||||++|+|+||||||.||||||||++++||+++++++++.+.||+|+|+||+.. +.||+||++..|++|+.+
T Consensus 6 ~lP~~~Dwr~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gC~GG~~~~a~~~~~~ 85 (224)
T 3f75_A 6 ELPAGVDWRSRGCVTPVKDQRDCGSCWAFSTTGALEGAHCAKTGKLVSLSEQELMDCSRAEGNQSCSGGEMNDAFQYVLD 85 (224)
T ss_dssp GSCSCEEHHHHTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGGGCBCHHHHHHHHHH
T ss_pred CCCCceecccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCCceeCHHHHhhcccCCCCCCCCCCCHHHHHHHHHH
Confidence 789999999999999999999999999999999999999999999999999999999874 899999999999999988
Q ss_pred cCCcCCCCccccCCCCCCccCCccCcceEEecceeecC-CCHHHHHHHHHcCCeEEEEeccCccccccCCCeeeCCCCCC
Q 043774 207 NGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVE-PSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSND 285 (485)
Q Consensus 207 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~-~~~~~l~~al~~gPV~v~i~~~~~~f~~Y~sGIy~~~c~~~ 285 (485)
++||++|++|||.+.++.|..... ....++.+|..++ .++++|+++|++|||+|+|++...+|++|++|||++.|+.
T Consensus 86 ~~Gi~~e~~yPY~~~~~~C~~~~~-~~~~~i~~~~~~~~~~~~~l~~~l~~gPV~v~i~~~~~~f~~y~~Giy~~~~~~- 163 (224)
T 3f75_A 86 SGGICSEDAYPYLARDEECRAQSC-EKVVKILGFKDVPRRSEAAMKAALAKSPVSIAIEADQMPFQFYHEGVFDASCGT- 163 (224)
T ss_dssp HTCBCBTTTSCCCSSCCCCCGGGS-CCCBCCSEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHTEEEEEECCCCCC-
T ss_pred hCCccccccCCCcCCCCCCCcCCC-CceEEeccEEEeCCChHHHHHHHHcCCCEEEEEeccchhhhcCccceECCCCCC-
Confidence 679999999999999999975432 3345688898887 6899999999999999999986568999999999976754
Q ss_pred CCccCeEEEEEEeeec--CCeeEEEEEcCCCCCCCCCceEEEEeCCCCCCCceeeeeeeceeee
Q 043774 286 PYYIDHAVLIVGYGSE--NGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPIK 347 (485)
Q Consensus 286 ~~~~~HaV~iVGyg~~--~g~~yWivkNSWG~~WGe~GY~ri~r~~~~~~~~CgI~~~~~yp~~ 347 (485)
.++|||+|||||++ +|++|||||||||++|||+|||||+|+.. ..|.|||+++++||++
T Consensus 164 --~~~Hav~iVGyg~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~-~~~~cgi~~~~~~p~~ 224 (224)
T 3f75_A 164 --DLDHGVLLVGYGTDKESKKDFWIMKNSWGTGWGRDGYMYMAMHKG-EEGQCGLLLDASFPVM 224 (224)
T ss_dssp --CCCEEEEEEEEEEETTTTEEEEEEECSBCTTSTBTTEEEEESCSC-TTCGGGTTSSCEEEEC
T ss_pred --ccCeEEEEEEEecccCCCCCEEEEECCcCcchhhCCEEEEEcCCC-CCCcCcccCceeeeeC
Confidence 68999999999987 89999999999999999999999999863 2479999999999974
No 32
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A
Probab=100.00 E-value=5.5e-60 Score=460.96 Aligned_cols=213 Identities=42% Similarity=0.797 Sum_probs=193.3
Q ss_pred CCCCCceeccCCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHhCCCcccChhHhhhccCCCCCCCCCchHHHHHHHHHc
Q 043774 128 CEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINN 207 (485)
Q Consensus 128 ~~lP~s~DwR~~g~vtpVkdQg~CGsCwAfA~~~~lE~~~~i~~~~~~~LS~Q~l~dC~~~~~gC~GG~~~~a~~~~~~~ 207 (485)
.+||++||||++|+|+||||||.||||||||++++||+++++++++.+.||+|+|+||+..+.||+||++..|++|+.++
T Consensus 16 ~~lP~~~DwR~~~~vtpVkdQg~CGsCWAFaa~~alE~~~~i~~~~~~~lSeq~l~dC~~~~~gC~GG~~~~a~~yi~~~ 95 (241)
T 2oul_A 16 NFDHAAYDWRLHSGVTPVKDQKNCGSCWAFSSIGSVESQYAIRKNKLITLSEQELVDCSFKNYGCNGGLINNAFEDMIEL 95 (241)
T ss_dssp CCCSSCEEGGGTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHCTTSCTTBCBCHHHHHHHHHHT
T ss_pred ccCCCccccCcCCCCCCCccCccchHHHHHHHHHHHHHHHHHhcCCCcccCHHHHHhhcCCCCCCCCCCHHHHHHHHHHh
Confidence 37999999999999999999999999999999999999999999999999999999999778999999999999999886
Q ss_pred CCcCCCCccccCCCCCC-ccCCccCcceEEecceeecC-CCHHHHHHHHHcCCeEEEEeccCccccccCCCeeeCCCCCC
Q 043774 208 GGIDTESDYPYTGVDGT-CNITKEETKVVSIDGYKDVE-PSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSND 285 (485)
Q Consensus 208 ~Gi~~e~~yPY~~~~~~-C~~~~~~~~~~~i~~y~~v~-~~~~~l~~al~~gPV~v~i~~~~~~f~~Y~sGIy~~~c~~~ 285 (485)
+||++|++|||.+..+. |.... ....++|++|..++ .++++||++| |||+|+|++. .+|++|++|||+..|+.
T Consensus 96 ~Gi~~e~~yPY~~~~~~~C~~~~-~~~~~~i~~~~~v~~~~~~~ik~~l--GPV~v~i~~~-~~f~~Y~~Giy~~~c~~- 170 (241)
T 2oul_A 96 GGICPDGDYPYVSDAPNLCNIDR-CTEKYGIKNYLSVPDNKLKEALRFL--GPISISVAVS-DDFAFYKEGIFDGECGD- 170 (241)
T ss_dssp TSBCBTTSSCCCTTSCCCCCTTS-SSCCBCCSEEEECCTTCHHHHHHHT--CCEEEEECBC-HHHHTCCSSBCCSCBCS-
T ss_pred CCcCccccCCCcCCCCCcCCCCC-CccceeeeeEEEeCCCCHHHHHHhh--CCEEEEEecC-cchhhcCCcEEcCcCCC-
Confidence 79999999999998888 98643 23456789998887 5899999999 9999999984 78999999999887765
Q ss_pred CCccCeEEEEEEeeecC----------CeeEEEEEcCCCCCCCCCceEEEEeCCCCCCCceeeeeeeceeee
Q 043774 286 PYYIDHAVLIVGYGSEN----------GEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPIK 347 (485)
Q Consensus 286 ~~~~~HaV~iVGyg~~~----------g~~yWivkNSWG~~WGe~GY~ri~r~~~~~~~~CgI~~~~~yp~~ 347 (485)
.++|||+|||||+++ |++|||||||||++|||+|||||+|+.+...+.|||+++++||+.
T Consensus 171 --~~~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~~ 240 (241)
T 2oul_A 171 --QLNHAVMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIETDESGLMRKCGLGTDAFIPLI 240 (241)
T ss_dssp --SCCEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCGGGTTSSEEEEEC
T ss_pred --CCCEEEEEEEeccccccccccccCCCCCEEEEEeCCCCCcccCCEEEEEcCCCCCCCcCCccceEEEEee
Confidence 389999999999875 889999999999999999999999997644566999999999985
No 33
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A*
Probab=100.00 E-value=5.5e-60 Score=454.94 Aligned_cols=213 Identities=47% Similarity=0.954 Sum_probs=193.6
Q ss_pred CCCceeccCCC-CCCcccCCCCCcchHHHHHHHHHHHHHHHHhCCCcccChhHhhhccC--CCCCCCCCchHHHHHHHHH
Q 043774 130 APSSLDWRKRG-IVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDT--TSYGCDGGYMDYAFEWVIN 206 (485)
Q Consensus 130 lP~s~DwR~~g-~vtpVkdQg~CGsCwAfA~~~~lE~~~~i~~~~~~~LS~Q~l~dC~~--~~~gC~GG~~~~a~~~~~~ 206 (485)
||++||||++| +|+||||||.||||||||++++||+++++++++.++||+|+|+||+. .+.||+||++..|++|+.+
T Consensus 1 lP~~~DwR~~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~ 80 (220)
T 8pch_A 1 YPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRY 80 (220)
T ss_dssp CCSCEEHHHHSSCSCCCCBCTTSCCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHGGGGTCCGGGCCCHHHHHHHHHH
T ss_pred CCCCEecCcCCCcCCcccccCCCchHHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhCcCccCCCCCCCCCHHHHHHHHHH
Confidence 79999999999 89999999999999999999999999999999999999999999986 4789999999999999998
Q ss_pred cCCcCCCCccccCCCCCCccCCccCcceEEecceeecC-CCHHHHHHHHHc-CCeEEEEeccCccccccCCCeeeC-CCC
Q 043774 207 NGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVE-PSDSALLCAAVQ-QPISVGMVGSASDFQLYTSGIYNG-DCS 283 (485)
Q Consensus 207 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~-~~~~~l~~al~~-gPV~v~i~~~~~~f~~Y~sGIy~~-~c~ 283 (485)
++||++|++|||.+..+.|.... .....++.+|..++ .++++|+++|++ |||+|+|++. .+|++|++|||+. .|.
T Consensus 81 ~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~~~~~~~-~~f~~Y~~Giy~~~~~~ 158 (220)
T 8pch_A 81 NKGIMGEDTYPYKGQDDHCKFQP-DKAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFEVT-NDFLMYRKGIYSSTSCH 158 (220)
T ss_dssp HTCEEBTTTSCCCSSCCCCCCCG-GGEEECEEEEEECCTTCHHHHHHHHHHTCCEEEEECCC-HHHHTCCSSEECCSSCC
T ss_pred cCCcCcccccCccCCCCCCCCCC-CcceEEeCCEEEeCCCCHHHHHHHHHhcCCEEEEEEec-cchhhcCCCcccCCcCC
Confidence 88999999999999999998643 34556788898887 789999999985 9999999985 5899999999975 465
Q ss_pred CCCCccCeEEEEEEeeecCCeeEEEEEcCCCCCCCCCceEEEEeCCCCCCCceeeeeeeceeeec
Q 043774 284 NDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPIKE 348 (485)
Q Consensus 284 ~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~ri~r~~~~~~~~CgI~~~~~yp~~~ 348 (485)
.....++|||+|||||+++|++|||||||||++|||+|||||+|+. |.|||+++++||+..
T Consensus 159 ~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~----n~cgi~~~~~~~~p~ 219 (220)
T 8pch_A 159 KTPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGK----NMCGLAACASYPIPL 219 (220)
T ss_dssp CSTTTCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTTSCEEEEEC
T ss_pred CCCCcCCcEEEEEEEEccCCeeEEEEECCCCcCcccCCEEEEEcCC----CccccCCCceeEeec
Confidence 5444689999999999999999999999999999999999999985 699999999999864
No 34
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A*
Probab=100.00 E-value=9e-60 Score=460.01 Aligned_cols=213 Identities=39% Similarity=0.758 Sum_probs=193.0
Q ss_pred CCCCCceeccCCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHhCCCcccChhHhhhccCCCCCCCCCchHHHHHHHHHc
Q 043774 128 CEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINN 207 (485)
Q Consensus 128 ~~lP~s~DwR~~g~vtpVkdQg~CGsCwAfA~~~~lE~~~~i~~~~~~~LS~Q~l~dC~~~~~gC~GG~~~~a~~~~~~~ 207 (485)
.+||++||||++|+|+||||||.||||||||++++||++++++++..+.||+|+|+||+..+.||+||++..|++|+.++
T Consensus 18 ~~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~alE~~~~i~~~~~~~lSeq~lvdC~~~~~gC~GG~~~~a~~y~~~~ 97 (243)
T 3bwk_A 18 KLDRIAYDWRLHGGVTPVKDQALCGSCWAFSSVGSVESQYAIRKKALFLFSEQELVDCSVKNNGCYGGYITNAFDDMIDL 97 (243)
T ss_dssp CCCCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCSCCCBCHHHHHHHCTTSCGGGCCCHHHHHHHHHHT
T ss_pred ccCCCceecCcCCCCCCCccCCCCchHHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcCCCCCCCCCCHHHHHHHHHHh
Confidence 37999999999999999999999999999999999999999999999999999999999778899999999999999886
Q ss_pred CCcCCCCccccCCCCCC-ccCCccCcceEEecceeecC-CCHHHHHHHHHcCCeEEEEeccCccccccCCCeeeCCCCCC
Q 043774 208 GGIDTESDYPYTGVDGT-CNITKEETKVVSIDGYKDVE-PSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSND 285 (485)
Q Consensus 208 ~Gi~~e~~yPY~~~~~~-C~~~~~~~~~~~i~~y~~v~-~~~~~l~~al~~gPV~v~i~~~~~~f~~Y~sGIy~~~c~~~ 285 (485)
+||++|++|||.+..+. |.... ....++|++|..++ .++++||++| |||+|+|++. .+|++|++|||+..|+.
T Consensus 98 ~Gi~~e~~yPY~~~~~~~C~~~~-~~~~~~i~~~~~v~~~~~~~ik~~l--GPV~v~i~~~-~~f~~Y~~Giy~~~c~~- 172 (243)
T 3bwk_A 98 GGLCSQDDYPYVSNLPETCNLKR-CNERYTIKSYVSIPDDKFKEALRYL--GPISISIAAS-DDFAFYRGGFYDGECGA- 172 (243)
T ss_dssp TSBCBTTTSCCCTTSCCCCCGGG-CSSCBCCCEEEECCTTCHHHHHHHT--CCEEEEECCC-HHHHTCCSSSCCCCCCS-
T ss_pred CCcccccccCCcCCCCCcCCCCC-CccceeeeeEEEeCCCCHHHHHHhh--CCEEEEEecC-hhHHhcCCceecCCCCC-
Confidence 79999999999998888 97543 23456788998887 5899999999 9999999984 78999999999887765
Q ss_pred CCccCeEEEEEEeeecC----------CeeEEEEEcCCCCCCCCCceEEEEeCCCCCCCceeeeeeeceeee
Q 043774 286 PYYIDHAVLIVGYGSEN----------GEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPIK 347 (485)
Q Consensus 286 ~~~~~HaV~iVGyg~~~----------g~~yWivkNSWG~~WGe~GY~ri~r~~~~~~~~CgI~~~~~yp~~ 347 (485)
.++|||+|||||+++ |++|||||||||++|||+|||||+|+.+...+.|||+++++||+.
T Consensus 173 --~~~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~~ 242 (243)
T 3bwk_A 173 --APNHAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGGYINLETDENGYKKTCSIGTEAYVPLL 242 (243)
T ss_dssp --SCCEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCSTTTTSSEEEEEC
T ss_pred --cCCeEEEEEEecCccccccccccCCCCCEEEEEeCCCCCcCCCcEEEEEcCCCCCCCcCCccceEEEEec
Confidence 289999999999875 889999999999999999999999997644466999999999985
No 35
>3f5v_A DER P 1 allergen; allergy, asthma, DUST mites, glycoprotein, hydrola protease, secreted, thiol protease; HET: P6G; 1.36A {Dermatophagoides pteronyssinus} PDB: 2as8_A 3rvw_A* 3rvx_A 3rvv_A* 3d6s_A*
Probab=100.00 E-value=2.2e-59 Score=451.34 Aligned_cols=210 Identities=33% Similarity=0.580 Sum_probs=191.1
Q ss_pred CCCCCceeccCCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHhCCCcccChhHhhhccCCCCCCCCCchHHHHHHHHHc
Q 043774 128 CEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINN 207 (485)
Q Consensus 128 ~~lP~s~DwR~~g~vtpVkdQg~CGsCwAfA~~~~lE~~~~i~~~~~~~LS~Q~l~dC~~~~~gC~GG~~~~a~~~~~~~ 207 (485)
.+||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+. +.||+||++..|++|++++
T Consensus 8 ~~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~~~~~~~~~lS~q~l~dc~~-~~gC~GG~~~~a~~~~~~~ 86 (222)
T 3f5v_A 8 GNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRQQSLDLAEQELVDCAS-QHGCHGDTIPRGIEYIQHN 86 (222)
T ss_dssp CCCCSCEEHHHHTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC-SSTTBCCCHHHHHHHHHHH
T ss_pred cCCCCCCCCccCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhCcC-CCCCCCCCHHHHHHHHHHc
Confidence 379999999999999999999999999999999999999999999999999999999998 8999999999999999887
Q ss_pred CCcCCCCccccCCCCCCccCCccCcceEEecceeecC-CCHHHHHHHHHc--CCeEEEEecc-CccccccCCCeeeC-CC
Q 043774 208 GGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVE-PSDSALLCAAVQ--QPISVGMVGS-ASDFQLYTSGIYNG-DC 282 (485)
Q Consensus 208 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~-~~~~~l~~al~~--gPV~v~i~~~-~~~f~~Y~sGIy~~-~c 282 (485)
||++|++|||.+..+.|. ......+++.+|..++ .++++|+++|++ |||+|+|.+. ..+|++|++|||.. .+
T Consensus 87 -Gi~~e~~yPY~~~~~~C~--~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~~gpV~v~~~~~~~~~f~~Y~~gi~~~~~~ 163 (222)
T 3f5v_A 87 -GVVQESYYRYVAREQSCR--RPNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHYDGRTIIQRDN 163 (222)
T ss_dssp -CEEBGGGSCCCSSCCCCC--CCSSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHHHTCCSSSCBCCCC
T ss_pred -CCCchhhCCCcccCCCcc--CCcCcceeeccEEEeCCCCHHHHHHHHHhcCCCEEEEEEeccchhhhccCCCceecCCC
Confidence 999999999999999998 3345667899999985 789999999986 8999999984 36899999998753 33
Q ss_pred CCCCCccCeEEEEEEeeecCCeeEEEEEcCCCCCCCCCceEEEEeCCCCCCCceeeeeeeceeee
Q 043774 283 SNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPIK 347 (485)
Q Consensus 283 ~~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~ri~r~~~~~~~~CgI~~~~~yp~~ 347 (485)
.. ..++|||+|||||+++|++|||||||||++|||+|||||+|+. |.|||+++++||+.
T Consensus 164 ~~--~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~r~~----n~cgi~~~~~~p~~ 222 (222)
T 3f5v_A 164 GY--QPNYHAVNIVGYSNAQGVDYWIVRNSWDTNWGDNGYGYFAANI----DLMMIEEYPYVVIL 222 (222)
T ss_dssp SS--SCEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTTSCEEEEC
T ss_pred CC--CccCcEEEEEEEeccCCCEEEEEEcCCCCCcccCCEEEEEcCC----CeecCCCceeEEeC
Confidence 32 4689999999999999999999999999999999999999984 69999999999974
No 36
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ...
Probab=100.00 E-value=5.8e-56 Score=438.71 Aligned_cols=212 Identities=31% Similarity=0.610 Sum_probs=179.0
Q ss_pred CCCCCceeccCC----CCCCcccCCCCCcchHHHHHHHHHHHHHHHHhC--CCcccChhHhhhccC--CCCCCCCCchHH
Q 043774 128 CEAPSSLDWRKR----GIVTPVKDQGSCGSCWSFSTTGAIEGINALVTG--DLISLSEQELVDCDT--TSYGCDGGYMDY 199 (485)
Q Consensus 128 ~~lP~s~DwR~~----g~vtpVkdQg~CGsCwAfA~~~~lE~~~~i~~~--~~~~LS~Q~l~dC~~--~~~gC~GG~~~~ 199 (485)
.+||++||||++ +.|+||||||.||||||||++++||++++|+++ ..+.||+|+|+||+. .+.||+||++..
T Consensus 5 ~~lP~~~D~R~~w~~~~~vt~VkdQg~CGSCWAfa~~~ale~~~~i~~~~~~~~~LS~q~lvdC~~~~~~~gC~GG~~~~ 84 (266)
T 3cbj_A 5 LKLPASFDAREQWPQCPTIKEIRDQGSCGSAWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAE 84 (266)
T ss_dssp CCCCSCEEHHHHSTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHCGGGGBCTTBCBCHHH
T ss_pred CCCCccCcchhccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHhCCCCccccCHHHHHhhccccCCCCCCCCCHHH
Confidence 479999999987 889999999999999999999999999999876 478999999999986 478999999999
Q ss_pred HHHHHHHcCCcCC-------CCccccC---------CCCCCccCC---------c----c----CcceEEecceeecCCC
Q 043774 200 AFEWVINNGGIDT-------ESDYPYT---------GVDGTCNIT---------K----E----ETKVVSIDGYKDVEPS 246 (485)
Q Consensus 200 a~~~~~~~~Gi~~-------e~~yPY~---------~~~~~C~~~---------~----~----~~~~~~i~~y~~v~~~ 246 (485)
||+|+.++ ||++ |++|||. +..+.|... . . ..+.+.+. +..++.+
T Consensus 85 a~~y~~~~-Gi~~~~~Y~~~e~~~PY~~~~~~~~~~~~~~~C~~~~~~p~c~~~c~~~~~~~~~~~~~~~~~-~~~v~~~ 162 (266)
T 3cbj_A 85 AWNFWTRK-GLVSGGLYESHVGCRPYSIPPCEAHVNGARPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYN-SYSVSNS 162 (266)
T ss_dssp HHHHHHHT-CBCBCCSTTCCCSSSCCCSCCCSCCCSCSSCCCCSCCCCCCCCCSCCTTCCSCTGGGCBCBSC-CEECCSC
T ss_pred HHHHHHHh-CcCcCccccccccccCcccccccccccCCCCCCccccCCCccccccCCCCcceeeeeeeeeee-eEEeCCC
Confidence 99999876 8999 9999998 344556321 0 0 00112223 3356678
Q ss_pred HHHHHHHHHc-CCeEEEEeccCccccccCCCeeeCCCCCCCCccCeEEEEEEeeecCCeeEEEEEcCCCCCCCCCceEEE
Q 043774 247 DSALLCAAVQ-QPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYI 325 (485)
Q Consensus 247 ~~~l~~al~~-gPV~v~i~~~~~~f~~Y~sGIy~~~c~~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~ri 325 (485)
+++||++|++ |||+|+|++. .+|++|++|||+..|+. ..++|||+|||||+++|++|||||||||++|||+|||||
T Consensus 163 ~~~i~~~i~~~GPV~v~i~~~-~~f~~Y~~Gvy~~~~~~--~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i 239 (266)
T 3cbj_A 163 EKDIMAEIYKNGPVEGAFSVY-SDFLLYKSGVYQHVTGE--MMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKI 239 (266)
T ss_dssp HHHHHHHHHHHCCEEEEEEEE-GGGGGCCSSEECCCSSC--EEEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEE
T ss_pred HHHHHHHHHhcCCEEEEEEec-cchhhcCCeEEecCCCC--ccCCeEEEEEEecccCCceEEEEEcCCCCccCCCCEEEE
Confidence 9999999885 9999999984 68999999999876654 356999999999999999999999999999999999999
Q ss_pred EeCCCCCCCceeeeeeeceeeec
Q 043774 326 TRDTSLEYGKCAINAMASYPIKE 348 (485)
Q Consensus 326 ~r~~~~~~~~CgI~~~~~yp~~~ 348 (485)
+|+. |.|||++.+++++..
T Consensus 240 ~rg~----n~cgI~~~~~~~~p~ 258 (266)
T 3cbj_A 240 LRGQ----DHCGIESEVVAGIPR 258 (266)
T ss_dssp ECSS----CGGGTTTSCEECCBC
T ss_pred EcCC----CcccccCceEEEEee
Confidence 9985 689999998887543
No 37
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A*
Probab=100.00 E-value=1.3e-55 Score=433.31 Aligned_cols=209 Identities=32% Similarity=0.658 Sum_probs=176.1
Q ss_pred CCCCceeccCC----CCCCcccCCCCCcchHHHHHHHHHHHHHHHHhC--CCcccChhHhhhccC-CCCCCCCCchHHHH
Q 043774 129 EAPSSLDWRKR----GIVTPVKDQGSCGSCWSFSTTGAIEGINALVTG--DLISLSEQELVDCDT-TSYGCDGGYMDYAF 201 (485)
Q Consensus 129 ~lP~s~DwR~~----g~vtpVkdQg~CGsCwAfA~~~~lE~~~~i~~~--~~~~LS~Q~l~dC~~-~~~gC~GG~~~~a~ 201 (485)
+||++||||++ +.|+||||||.||||||||++++||++++|+++ .++.||+|+|+||+. .+.||+||++..||
T Consensus 2 ~lP~s~D~R~~~~~~~~vtpVkdQg~CGSCWAFaa~~ale~~~~i~~~~~~~~~LSeQ~lvdC~~~~~~GC~GG~~~~a~ 81 (254)
T 3qsd_A 2 EIPSSFDSRKKWPRCKSIATIRDQSRCGSCWAFGAVEAMSDRSCIQSGGKQNVELSAVDLLSCCESCGLGCEGGILGPAW 81 (254)
T ss_dssp CCCSCEEHHHHCTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTCCCCCBCHHHHHHHCTTSBCTTBCBCHHHHH
T ss_pred CCCCcCccccccCCCCccCCCCCcccCccHHHHHHHHHHHHHHHHHhCCCccccCCHHHHHhhhcCCCCCCCCCCHHHHH
Confidence 68999999998 689999999999999999999999999999986 689999999999976 56899999999999
Q ss_pred HHHHHcCCcCCCCcc-------ccC---------CCCCCccCCc----------c---C-----cceEEecceeecCCCH
Q 043774 202 EWVINNGGIDTESDY-------PYT---------GVDGTCNITK----------E---E-----TKVVSIDGYKDVEPSD 247 (485)
Q Consensus 202 ~~~~~~~Gi~~e~~y-------PY~---------~~~~~C~~~~----------~---~-----~~~~~i~~y~~v~~~~ 247 (485)
+|++++ ||++|++| ||. +..+.|.... . . .+.+. .....++.++
T Consensus 82 ~yi~~~-Gi~~e~~y~~~~~c~PY~~~~c~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~-~~~~~~~~~~ 159 (254)
T 3qsd_A 82 DYWVKE-GIVTGSSKENHAGCEPYPFPKCEHHTKGKYPPCGSKIYKTPRCKQTCQKKYKTPYTQDKHRG-KSSYNVKNDE 159 (254)
T ss_dssp HHHHHT-CBCBCCCTTTCCSSSCCSSCCCBCSSCSSSCBCCSCCCCCCCCCCCCCTTCCSCGGGGCBCC-SEEEECCSCH
T ss_pred HHHHHc-CCCcccccccCcCcCCcccccccccccCcCCCCcccccCCccccccccCCccceeeeeeeee-eeeEecCCcH
Confidence 999887 99999988 996 4444553210 0 0 00011 1123456789
Q ss_pred HHHHHHHH-cCCeEEEEeccCccccccCCCeeeCCCCCCCCccCeEEEEEEeeecCCeeEEEEEcCCCCCCCCCceEEEE
Q 043774 248 SALLCAAV-QQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYIT 326 (485)
Q Consensus 248 ~~l~~al~-~gPV~v~i~~~~~~f~~Y~sGIy~~~c~~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~ri~ 326 (485)
++|+++|+ +|||+|+|++. .+|++|++|||...+.. ..++|||+|||||+++|++|||||||||++|||+|||||+
T Consensus 160 ~~i~~~l~~~gPv~~~~~~~-~~f~~y~~Gi~~~~~~~--~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~ 236 (254)
T 3qsd_A 160 KAIQKEIMKYGPVEAGFTVY-EDFLNYKSGIYKHITGE--TLGGHAIRIIGWGVENKAPYWLIANSWNEDWGENGYFRIV 236 (254)
T ss_dssp HHHHHHHHHHCCEEEEEEEE-GGGGGCCSSEECCCSSC--EEEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEE
T ss_pred HHHHHHHHHcCCEEEEEEec-cccccccCCeeccCCCC--CCCCeEEEEEEEeecCCeeEEEEEeCCCCCcccCCeEEEE
Confidence 99999997 59999999984 78999999999876543 3569999999999999999999999999999999999999
Q ss_pred eCCCCCCCceeeeeeeceee
Q 043774 327 RDTSLEYGKCAINAMASYPI 346 (485)
Q Consensus 327 r~~~~~~~~CgI~~~~~yp~ 346 (485)
|+. |.|||+++++..+
T Consensus 237 rg~----n~CgI~~~~~~~~ 252 (254)
T 3qsd_A 237 RGR----DECSIESEVTAGR 252 (254)
T ss_dssp CSS----CGGGTTSSEEEEE
T ss_pred cCC----CeecCCCceEeec
Confidence 985 6999999887654
No 38
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A
Probab=100.00 E-value=5.8e-55 Score=433.65 Aligned_cols=214 Identities=28% Similarity=0.581 Sum_probs=182.6
Q ss_pred CCCCCceeccCC---CCCCcccCCC---CCcchHHHHHHHHHHHHHHHHhC-C--CcccChhHhhhccCCCCCCCCCchH
Q 043774 128 CEAPSSLDWRKR---GIVTPVKDQG---SCGSCWSFSTTGAIEGINALVTG-D--LISLSEQELVDCDTTSYGCDGGYMD 198 (485)
Q Consensus 128 ~~lP~s~DwR~~---g~vtpVkdQg---~CGsCwAfA~~~~lE~~~~i~~~-~--~~~LS~Q~l~dC~~~~~gC~GG~~~ 198 (485)
.+||++||||++ ++|+|||||| .||||||||++++||++++|+++ . .+.||+|+|+||+. +.||+||++.
T Consensus 34 ~~lP~~~DwR~~~~~~~vtpVkdQg~~~~CGSCWAfa~~~alE~~~~i~~~g~~~~~~LS~Q~lvdC~~-~~gC~GG~~~ 112 (277)
T 1deu_A 34 ADLPKSWDWRNVDGVNYASITRNQHIPQYCGSCWAHASTSAMADRINIKRKGAWPSTLLSVQNVIDCGN-AGSCEGGNDL 112 (277)
T ss_dssp GGSCSCEETTSBTTBCCCCCCCBTTCSSCCBCHHHHHHHHHHHHHHHHHTTTCSSCCCBCHHHHHHHSS-SEETBEECHH
T ss_pred ccCCCceecccCCCCCcCCccccCCCCCCCcchHHHHHHHHHHHHHHHHhCCCCCCcccCHHHHHhCcC-CCCCCCCCHH
Confidence 479999999998 6899999999 99999999999999999999875 3 47999999999986 4899999999
Q ss_pred HHHHHHHHcCCcCCCCccccCCCCCCccCCc--------------cCcceEEecceeecCCCHHHHHHHHH-cCCeEEEE
Q 043774 199 YAFEWVINNGGIDTESDYPYTGVDGTCNITK--------------EETKVVSIDGYKDVEPSDSALLCAAV-QQPISVGM 263 (485)
Q Consensus 199 ~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~--------------~~~~~~~i~~y~~v~~~~~~l~~al~-~gPV~v~i 263 (485)
.||+|+.++ ||++|++|||.+.++.|.... .....+++.+|..++ ++++||++|+ +|||+|+|
T Consensus 113 ~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~c~~~~~~~~~~i~~y~~v~-~~~~i~~~i~~~GPV~v~i 190 (277)
T 1deu_A 113 SVWDYAHQH-GIPDETCNNYQAKDQECDKFNQCGTCNEFKECHAIRNYTLWRVGDYGSLS-GREKMMAEIYANGPISCGI 190 (277)
T ss_dssp HHHHHHHHT-CBCBGGGSCCCSSCCCCCHHHHSEEEEETTEEEECSSCCCBCEEEEEEEC-SHHHHHHHHHHHCCEEEEE
T ss_pred HHHHHHHHc-CCCcCccCCCcCCCCCccccccccccccCcccccccCcceEEeceeEecC-CHHHHHHHHHHcCCEEEEE
Confidence 999999876 999999999999888887310 112335667777775 5788888886 59999999
Q ss_pred eccCccccccCCCeeeCCCCCCCCccCeEEEEEEeeecCCeeEEEEEcCCCCCCCCCceEEEEeCCC---C-CCCceeee
Q 043774 264 VGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTS---L-EYGKCAIN 339 (485)
Q Consensus 264 ~~~~~~f~~Y~sGIy~~~c~~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~ri~r~~~---~-~~~~CgI~ 339 (485)
++. .+|++|++|||+..+.. ..++|||+|||||+++|++|||||||||++|||+|||||+|+.+ . ....|||+
T Consensus 191 ~~~-~~f~~Y~~GIy~~~~~~--~~~~HaV~iVGyg~~~g~~YWivkNSWG~~WGe~GY~~i~rg~n~~g~g~~~~cgIe 267 (277)
T 1deu_A 191 MAT-ERLANYTGGIYAEYQDT--TYINHVVSVAGWGISDGTEYWIVRNSWGEPWGERGWLRIVTSTYKDGKGARYNLAIE 267 (277)
T ss_dssp CCC-HHHHTCCSSEECBCCSC--CCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECTTHHHHTGGGTBTTTT
T ss_pred ecc-cccccCcCcEECCCCCC--CcCCeEEEEEEecccCCccEEEEEeCCCCccCCCcEEEEEcCCCcccccccccceec
Confidence 984 68999999999875433 36899999999999999999999999999999999999999964 0 01279999
Q ss_pred eeeceeee
Q 043774 340 AMASYPIK 347 (485)
Q Consensus 340 ~~~~yp~~ 347 (485)
++++|++.
T Consensus 268 ~~~~~~~p 275 (277)
T 1deu_A 268 EHCTFGDP 275 (277)
T ss_dssp SCEEEEEE
T ss_pred cccEeecc
Confidence 99999864
No 39
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X
Probab=100.00 E-value=2.4e-50 Score=398.35 Aligned_cols=210 Identities=26% Similarity=0.522 Sum_probs=165.1
Q ss_pred CceeccCC-CCCC--cccCCCCCcchHHHHHHHHHHHHHHHHhCCCcccChhHhhhccC--CCCCCCCCchHHH-HHHHH
Q 043774 132 SSLDWRKR-GIVT--PVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDT--TSYGCDGGYMDYA-FEWVI 205 (485)
Q Consensus 132 ~s~DwR~~-g~vt--pVkdQg~CGsCwAfA~~~~lE~~~~i~~~~~~~LS~Q~l~dC~~--~~~gC~GG~~~~a-~~~~~ 205 (485)
--.|||++ |+++ ||||||.||||||||++++||++++++++.++.||+|+|+||+. .+.||+||....+ +.|+.
T Consensus 9 ~~~dWR~~~~~~~it~VkdQg~CGSCWAFaa~~alE~~~~i~~~~~~~LS~Q~lvdC~~~~~~~GC~GG~~~~~~~~~i~ 88 (265)
T 2wbf_X 9 YCNRLKDENNCISNLQVEDQGNCDTSWIFASKYHLETIRCMKGYEPTKISALYVANCYKGEHKDRCDEGSSPMEFLQIIE 88 (265)
T ss_dssp CBCGGGCTTSTGGGSCCCBCTTSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHCCSSSCCCTTTCCCCHHHHHHHHH
T ss_pred HHHhhccCCCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHhhcccCCCCCCCCCCHHHHHHHHH
Confidence 35899999 6877 99999999999999999999999999999999999999999986 3789999975554 56776
Q ss_pred HcCCcCCCCccccCCC--CCCccCCcc----------------CcceEEecceeecCC-----C----HHHHHHHHHc-C
Q 043774 206 NNGGIDTESDYPYTGV--DGTCNITKE----------------ETKVVSIDGYKDVEP-----S----DSALLCAAVQ-Q 257 (485)
Q Consensus 206 ~~~Gi~~e~~yPY~~~--~~~C~~~~~----------------~~~~~~i~~y~~v~~-----~----~~~l~~al~~-g 257 (485)
+++||++|++|||.+. .+.|..... ....+++.+|..++. + +++||++|++ |
T Consensus 89 ~~Ggi~~e~~yPY~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ik~~i~~~G 168 (265)
T 2wbf_X 89 DYGFLPAESNYPYNYVKVGEQCPKVEDHWMNLWDNGKILHNKNEPNSLDGKGYTAYESERFHDNMDAFVKIIKTEVMNKG 168 (265)
T ss_dssp HHCCCCBTTTSCCCGGGTTSCCCCCCTTCCCTTTTCEECCCCCSSSTTCCSSEEEEEGGGGTTCHHHHHHHHHHHHHHHS
T ss_pred HcCCCCCccccCCcCCCCCCCCCCccccccccccccccccccCCCceeecCCceEeeccccccchhhHHHHHHHHHHhcC
Confidence 7766999999999863 467864321 111235667766542 3 3788888875 9
Q ss_pred CeEEEEeccCccccccC-CCee-eCCCCCCCCccCeEEEEEEeeec---CC--eeEEEEEcCCCCCCCCCceEEEEeCCC
Q 043774 258 PISVGMVGSASDFQLYT-SGIY-NGDCSNDPYYIDHAVLIVGYGSE---NG--EDYWIVKNSWGTSWGIDGYFYITRDTS 330 (485)
Q Consensus 258 PV~v~i~~~~~~f~~Y~-sGIy-~~~c~~~~~~~~HaV~iVGyg~~---~g--~~yWivkNSWG~~WGe~GY~ri~r~~~ 330 (485)
||+|+|++. +|+.|+ +|+| ...|+. ..++|||+|||||++ +| ++|||||||||++|||+|||||+|+.
T Consensus 169 PV~v~i~~~--~f~~y~~~g~~~~~~c~~--~~~~HaV~iVGyG~~~~~~g~~~~YWivkNSWG~~WGe~GY~ri~~~g- 243 (265)
T 2wbf_X 169 SVIAYIKAE--NVMGYEFSGKKVKNLCGD--DTADHAVNIVGYGNYVNSEGEKKSYWIVRNSWGPYWGDEGYFKVDMYG- 243 (265)
T ss_dssp CEEEEECGG--GGCSGGGGSSSEECCCCC--SCCCEEEEEEEEEEEECTTSCEEEEEEEECSBCTTSTBTTEEEEESSC-
T ss_pred CEEEEEEcc--cccccccCCcEEcCCCCC--CcCCEEEEEEEEeCCcccCCCcCCEEEEEcCCCCccCCCCEEEEEecC-
Confidence 999999973 577774 4443 345654 368999999999984 66 68999999999999999999999853
Q ss_pred CCCCcee---eeeeeceeeec
Q 043774 331 LEYGKCA---INAMASYPIKE 348 (485)
Q Consensus 331 ~~~~~Cg---I~~~~~yp~~~ 348 (485)
.|.|| |.+.++||+..
T Consensus 244 --~n~Cgi~~~~~~~~~~~~~ 262 (265)
T 2wbf_X 244 --PTHCHFNFIHSVVIFNVDL 262 (265)
T ss_dssp --CTTCSSCSCCEEEEECEEC
T ss_pred --CCccCcceeEEEEeccccC
Confidence 36899 55566676554
No 40
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa}
Probab=100.00 E-value=2.4e-49 Score=396.12 Aligned_cols=238 Identities=19% Similarity=0.202 Sum_probs=175.1
Q ss_pred CCeEEecccCCCCCHHHHHHHHhhccccccccccCCccccccccccCCCCCCceeccCCCCCCcccCCCCCcchHHHHHH
Q 043774 81 GGHVVGLNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSNLHKTVQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTT 160 (485)
Q Consensus 81 ~s~~~g~N~FsDlt~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~CGsCwAfA~~ 160 (485)
.+..-.+|++.++..|.|+.. ++..+.+...... ..... .....+||++||||+++ ||||||.||||||||++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~-lG~~p~~~d~rd~-~~~~~--~~~~~~lP~s~DwR~~~---pVkdQG~CGSCWAFAa~ 84 (291)
T 3ois_A 12 SGLVPRGSHMQTVLKRRKKSG-YGYIPDIADIRDF-SYTPE--KSVIAALPPKVDLTPPF---QVYDQGRIGSCTANALA 84 (291)
T ss_dssp -----------CCCCCCCCTT-CCEECCCCCTTCC-BCCCC--HHHHHTCCSEEECCCSS---CCCBCTTSSCHHHHHHH
T ss_pred cCcccchhhHhHhhhcccccc-CCCCCCCCccccc-ccCCC--ccccccCCcceecccCC---CcccCCCCccHHHHHHH
Confidence 345667888999988887765 3444322211110 00110 01123799999999994 99999999999999999
Q ss_pred HHHHHHHHHHhCCCcccChhHhh--hccC---CC-CCCCCCchHHHHHHHHHcCCcCCCCccccCCCC---CCccCCc--
Q 043774 161 GAIEGINALVTGDLISLSEQELV--DCDT---TS-YGCDGGYMDYAFEWVINNGGIDTESDYPYTGVD---GTCNITK-- 229 (485)
Q Consensus 161 ~~lE~~~~i~~~~~~~LS~Q~l~--dC~~---~~-~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~---~~C~~~~-- 229 (485)
++||+++. ++++.+.||+|+|+ +|.. .+ .+|.||++..|++|+.++ ||++|++|||.+.+ +.|....
T Consensus 85 ~alE~~~~-~~g~~~~lS~q~l~~~~c~~~~~~~~~~c~GG~~~~A~~yi~~~-Gi~~e~~yPY~~~~~~~~~C~~~~~~ 162 (291)
T 3ois_A 85 AAIQFERI-HDKQSPEFIPSRLFIYYNERKIEGHVNYDSGAMIRDGIKVLHKL-GVCPEKEWPYGDTPADPRTEEFPPGA 162 (291)
T ss_dssp HHHHHHHH-HTTCSSCCCBCHHHHHHHHHHHSSCTTSCCCEEHHHHHHHHHHT-CCCBGGGSCCCCCCCCTTTCSCCTTC
T ss_pred HHHHHHHH-HhCCCCCcCcCHHHHHhhhhhhhcCCCCCCCcCHHHHHHHHHHh-CCCCHhhCCCCCCccccccccccccc
Confidence 99999875 56778899999998 6763 23 468899999999999887 99999999999863 3554310
Q ss_pred -----------cCcceEEecceeecCCCHHHHHHHHHc-CCeEEEEeccCccccccCC--CeeeCCCCCCCCccCeEEEE
Q 043774 230 -----------EETKVVSIDGYKDVEPSDSALLCAAVQ-QPISVGMVGSASDFQLYTS--GIYNGDCSNDPYYIDHAVLI 295 (485)
Q Consensus 230 -----------~~~~~~~i~~y~~v~~~~~~l~~al~~-gPV~v~i~~~~~~f~~Y~s--GIy~~~c~~~~~~~~HaV~i 295 (485)
.....+++.+|..++.++++|+++|++ |||+|+|++. .+|+.|++ |||..++......++|||+|
T Consensus 163 ~~~~~p~~~C~~~~~~~~i~~y~~v~~~e~~i~~al~~~gPV~v~~~~~-~~f~~y~~~~Gi~~~~~~~~~~~~~Hav~i 241 (291)
T 3ois_A 163 PASKKPSDQCYKDAQNYKITEYSRVAQDIDHLKACLAVGSPFVFGFSVY-NSWVGNNSLPVRIPLPTKNDTLEGGHAVLC 241 (291)
T ss_dssp GGGSCCCHHHHHHHGGGCCCEEEECCSCHHHHHHHHHTTCCEEEEEEEE-HHHHGGGCCCSBCCCCCTTSCEEEEEEEEE
T ss_pred cccCCCCHHHHhhcccceeccEEEcCcCHHHHHHHHHcCCCEEEEEEec-cchhhcCCCCeEEeCCCCCCCCcCCeEEEE
Confidence 112345788999998899999999986 7999999984 68999998 99986532222346999999
Q ss_pred EEeeecCCeeEEEEEcCCCCCCCCCceEEEEeCCC
Q 043774 296 VGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTS 330 (485)
Q Consensus 296 VGyg~~~g~~yWivkNSWG~~WGe~GY~ri~r~~~ 330 (485)
|||| ++++|||||||||++|||+|||||+|+..
T Consensus 242 VGy~--~~~~ywivkNSWG~~WG~~Gy~~i~~~~~ 274 (291)
T 3ois_A 242 VGYD--DEIRHFRIRNSWGNNVGEDGYFWMPYEYI 274 (291)
T ss_dssp EEEE--TTTTEEEEECSBCTTSTBTTEEEEEHHHH
T ss_pred EEEe--CCCCEEEEEeCCCCCCCCCcEEEEEHHHh
Confidence 9998 46789999999999999999999999853
No 41
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A
Probab=100.00 E-value=3.9e-38 Score=328.12 Aligned_cols=209 Identities=17% Similarity=0.258 Sum_probs=156.9
Q ss_pred CCCCceeccCCCCCCcccCCCCCcchHHHHHHHHHHHHHHHH-hCCCcccCh----------------hHhhhccCC---
Q 043774 129 EAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALV-TGDLISLSE----------------QELVDCDTT--- 188 (485)
Q Consensus 129 ~lP~s~DwR~~g~vtpVkdQg~CGsCwAfA~~~~lE~~~~i~-~~~~~~LS~----------------Q~l~dC~~~--- 188 (485)
..+..|+++....++||+|||+||+|||||+++++|+.++++ +++.+.||+ |+|+||+..
T Consensus 47 ~~~~~F~~~~~~~~tpVknQg~cGsCWaFs~~~~le~~~~~k~~~~~~~lSe~yl~fwDKlEkan~flq~lidc~~~~~~ 126 (453)
T 2cb5_A 47 RAQHVFQHAVPQEGKPITNQKSSGRSWIFSCLNVMRLPFMKKLNIEEFEFSQSYLFFWDKVERCYFFLSAFVDTAQRKEP 126 (453)
T ss_dssp HCCCCCSEECSCCCSSCCBCCBSSCHHHHHHHHHHHHHHHHHTTCSCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCCceeeeeccCCCCcccCCCccchHhhhhHHHHHHHHHHHhcCCeEeeChHHHHHHHHHHHhhHHHHHHHHHHhccCC
Confidence 356778888888899999999999999999999999999998 578999999 999999743
Q ss_pred -----------CCCCCCCchHHHHHHHHHcCCcCCCCccccCCCC---------------------------C------C
Q 043774 189 -----------SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVD---------------------------G------T 224 (485)
Q Consensus 189 -----------~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~---------------------------~------~ 224 (485)
+.||+||.+..++.|+.++ ||+++++|||+... + .
T Consensus 127 ~d~R~v~~l~~~~gcdGG~~~~a~~~i~ky-Gl~p~~~yP~~~~s~ns~~mn~~L~~kLr~~a~~LR~~~~~g~~~~~l~ 205 (453)
T 2cb5_A 127 EDGRLVQFLLMNPANDGGQWDMLVNIVEKY-GVIPKKCFPESYTTEATRRMNDILNHKMREFCIRLRNLVHSGATKGEIS 205 (453)
T ss_dssp TTSHHHHHHHHCTTCSCBCHHHHHHHHHHH-CCCBGGGSCCCTGGGBCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred cchhhHHHhcCCCCCCCCChHHHHHHHHHc-CccchhhccccccccchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHH
Confidence 6899999999999999765 99999999998631 1 1
Q ss_pred ----------------c----------cCCccCc---------------ce--E--Eecceee-----------------
Q 043774 225 ----------------C----------NITKEET---------------KV--V--SIDGYKD----------------- 242 (485)
Q Consensus 225 ----------------C----------~~~~~~~---------------~~--~--~i~~y~~----------------- 242 (485)
| ....... .. . .+++|..
T Consensus 206 ~~k~~~l~~iy~il~~clG~pP~~F~~~~~dkd~~~~~~~~~TP~~F~~~~~~~~~~~~~yv~l~n~p~~~~py~~~y~v 285 (453)
T 2cb5_A 206 ATQDVMMEEIFRVVCICLGNPPETFTWEYRDKDKNYEKIGPITPLEFYREHVKPLFNMEDKICLVNDPRPQHKHNKLYTV 285 (453)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCSSEEEEEECTTSCEEEEEEECHHHHHHHHTTTTSCGGGEEEEECCCCTTSCSSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCCceeeEEEEccCCcccccCCCCHHHHHHHhcCCcCCCCCeEEEecCCCCcCcccceeEE
Confidence 4 1100000 00 0 2333332
Q ss_pred ----------------cCCC--HHHHHHHHHc-CCeEEEEeccCccccccCCCeeeCCCC--------------------
Q 043774 243 ----------------VEPS--DSALLCAAVQ-QPISVGMVGSASDFQLYTSGIYNGDCS-------------------- 283 (485)
Q Consensus 243 ----------------v~~~--~~~l~~al~~-gPV~v~i~~~~~~f~~Y~sGIy~~~c~-------------------- 283 (485)
++.+ .+.++.+|++ |||+++++++. +.++++|||+..+.
T Consensus 286 ~~~~Nv~~g~~~~y~Nvp~~~l~~~~~~al~~g~PV~~~~Dv~~--~~~~k~GI~~~~~~~~~~~fg~~~~~m~KaeRl~ 363 (453)
T 2cb5_A 286 EYLSNMVGGRKTLYNNQPIDFLKKMVAASIKDGEAVWFGCDVGK--HFNSKLGLSDMNLYDHELVFGVSLKNMNKAERLT 363 (453)
T ss_dssp TTCCSSTTCCCCCEEECCHHHHHHHHHHHHHTTCCEEEEECTTT--TEETTTTEECTTSBCHHHHHSCCSCSSCHHHHHH
T ss_pred eecCcccccccccccccCHHHHHHHHHHHHHcCCCEEEEEEeCh--hhccCCcEEcCccccchhhcCccccccCHHHHhh
Confidence 2211 1344566776 79999999964 45569999986542
Q ss_pred CCCCccCeEEEEEEee--ec-CCe-eEEEEEcCCCCCCCCCceEEEEeCCCCCCCceeeeeeeceeeec
Q 043774 284 NDPYYIDHAVLIVGYG--SE-NGE-DYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPIKE 348 (485)
Q Consensus 284 ~~~~~~~HaV~iVGyg--~~-~g~-~yWivkNSWG~~WGe~GY~ri~r~~~~~~~~CgI~~~~~yp~~~ 348 (485)
......+|||+||||| .+ +|+ +|||||||||++||++|||+|+++ .+..+.+.+++.
T Consensus 364 ~~~s~~~HAmlivGyg~~~d~~G~~~yWiVkNSWG~~wG~~GY~~ms~~--------wf~ey~~~vvV~ 424 (453)
T 2cb5_A 364 FGESLMTHAMTFTAVSEKDDQDGAFTKWRVENSWGEDHGHKGYLCMTDE--------WFSEYVYEVVVD 424 (453)
T ss_dssp TTSCCCCEEEEEEEEEECTTSCSCEEEEEEECSBCTTSTBTTEEEEEHH--------HHHHHEEEEEEE
T ss_pred ccCCCCCeEEEEEEeccccccCCCccEEEEEcCcCCCcCcCceEEechh--------hHhhceEEEEec
Confidence 0113579999999999 65 787 999999999999999999999986 344555554443
No 42
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A
Probab=100.00 E-value=3.3e-37 Score=321.42 Aligned_cols=208 Identities=19% Similarity=0.259 Sum_probs=143.8
Q ss_pred CCCceeccCCCCCCcccCCCCCcchHHHHHHHHHHHHHHHH-hCCCcccCh----------------hHhhhccC-----
Q 043774 130 APSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALV-TGDLISLSE----------------QELVDCDT----- 187 (485)
Q Consensus 130 lP~s~DwR~~g~vtpVkdQg~CGsCwAfA~~~~lE~~~~i~-~~~~~~LS~----------------Q~l~dC~~----- 187 (485)
.+..|+|+..+.++||||||+||+|||||+++++|+.++++ +++.++||+ |+|+||+.
T Consensus 53 ~~~~F~~~~~~~vtpVknQg~cGsCWaFs~~~~lE~~~~~~~~~~~~~LSe~yl~~~dklEkan~flq~lvdc~~~~~~~ 132 (457)
T 2e01_A 53 DNRVFNTVVSTDSTPVTNQKSSGRCWLFAATNQLRLNVLSELNLKEFELSQAYLFFYDKLEKANYFLDQIVSSADQDIDS 132 (457)
T ss_dssp CCCCCSEECC------------CCHHHHHHHHHHHHHHHHHTTCSSCCBCHHHHHHHHHHHHHHHHHHHHHHTTTSCTTS
T ss_pred CCCceEEEecCCccCcccCCCCccchhHHhHHHHHHHHHHHhCCCceeeCChhhhhhhHHHHHHHHHHHHHHhcCCcccc
Confidence 46678888888899999999999999999999999999998 788999999 78899975
Q ss_pred -------CCCCCCCCchHHHHHHHHHcCCcCCCCcccc-CCC---------------------------------C----
Q 043774 188 -------TSYGCDGGYMDYAFEWVINNGGIDTESDYPY-TGV---------------------------------D---- 222 (485)
Q Consensus 188 -------~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY-~~~---------------------------------~---- 222 (485)
.+.||+||.+..++.|+.++ ||++|++||| +.. .
T Consensus 133 r~v~~l~~~~gcdGG~~~~a~~~i~ky-Givpe~~yP~~s~~s~ns~~~n~~L~~kLr~~a~~lR~~~~~~~~~~~~l~~ 211 (457)
T 2e01_A 133 RLVQYLLAAPTEDGGQYSMFLNLVKKY-GLIPKDLYGDLPYSTTASRKWNSLLTTKLREFAETLRTALKERSADDSIIVT 211 (457)
T ss_dssp HHHHHHHHCTTCSCBCHHHHHHHHHHH-CCCBGGGSCSCSHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSCTTSHHHHH
T ss_pred hhhhhhccCCCCCCCCHHHHHHHHHHc-CccchhhcCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhHHH
Confidence 37899999999999999765 9999999999 310 0
Q ss_pred -----------------CCccCC---cc-----------------------------C--------------cceEEec-
Q 043774 223 -----------------GTCNIT---KE-----------------------------E--------------TKVVSID- 238 (485)
Q Consensus 223 -----------------~~C~~~---~~-----------------------------~--------------~~~~~i~- 238 (485)
|.+... .- . .+.+.+.
T Consensus 212 ~~~~~l~~iy~il~~~LG~pP~~~~~~F~~~~~dkd~~~~~~~~TP~~F~~~~v~~~~~dyV~l~n~p~~py~~~y~ve~ 291 (457)
T 2e01_A 212 LREQMQREIFRLMSLFMDIPPVQPNEQFTWEYVDKDKKIHTIKSTPLEFASKYAKLDPSTPVSLINDPRHPYGKLIKIDR 291 (457)
T ss_dssp HHHHHHHHHHHHHHHHSCCCSSCTTSCEEEEEECTTSCEEEEEECHHHHHHHTTCCCTTSEEEEECCTTSCTTCEEEETT
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCceEEEEEEcCCCCccCCCcChHHHHHHHcCCCchheEEEeecCCCccCeeEEEec
Confidence 001100 00 0 0000110
Q ss_pred ----------ceeecCCC--HHHHHHHHHc-CCeEEEEeccCccccccCCCeeeCCCC------------------CCCC
Q 043774 239 ----------GYKDVEPS--DSALLCAAVQ-QPISVGMVGSASDFQLYTSGIYNGDCS------------------NDPY 287 (485)
Q Consensus 239 ----------~y~~v~~~--~~~l~~al~~-gPV~v~i~~~~~~f~~Y~sGIy~~~c~------------------~~~~ 287 (485)
.|..++.+ .+.++.+|+. |||+++++++ .|++|++|||+..+. ....
T Consensus 292 ~~N~~~g~~~~y~Nvp~d~l~~~~~~aL~~g~PV~~~~Dv~--~~~~~~~GI~~~~~~~~~~fg~~~~m~KaeRl~~~~s 369 (457)
T 2e01_A 292 LGNVLGGDAVIYLNVDNETLSKLVVKRLQNNKAVFFGSHTP--KFMDKKTGVMDIELWNYPAIGYNLPQQKASRIRYHES 369 (457)
T ss_dssp CCSSTTCCCEEEEECCHHHHHHHHHHHHHTTCCEEEEECTT--TTEETTTTEECTTSBCGGGGTCCCCCCHHHHHHTTSC
T ss_pred cCCeecCCceeEEEcCHHHHHHHHHHHHHhCCCEEEEEEcC--HhHcccCceecccccchhhcCcccccCHHHhhccCCC
Confidence 13333322 1445566775 7999999995 477889999986541 0112
Q ss_pred ccCeEEEEEEeeec-CCe--eEEEEEcCCCCCCCCCceEEEEeCCCCCCCceeeeeeeceeeec
Q 043774 288 YIDHAVLIVGYGSE-NGE--DYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPIKE 348 (485)
Q Consensus 288 ~~~HaV~iVGyg~~-~g~--~yWivkNSWG~~WGe~GY~ri~r~~~~~~~~CgI~~~~~yp~~~ 348 (485)
..+|||+|||||.+ +|+ +|||||||||++||++|||+|+++ .|..++++++..
T Consensus 370 ~~~HAmlivGyg~d~~G~~p~yW~VkNSWG~~wG~~GY~~ms~~--------wf~ey~~~ivV~ 425 (457)
T 2e01_A 370 LMTAAMLITGCHVDETSKLPLRYRVENSWGKDSGKDGLYVMTQK--------YFEEYCFQIVVD 425 (457)
T ss_dssp CCCEEEEEEEEEECTTTCCEEEEEEECSSCTTSTBTTEEEEEHH--------HHHHHEEEEEEE
T ss_pred CCCeEEEEEEEEeccCCCccCEEEEEeCccCCcCCCceEEeehh--------hHhhccEEEEec
Confidence 57999999999964 788 999999999999999999999986 355555555443
No 43
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis}
Probab=100.00 E-value=7.6e-33 Score=282.79 Aligned_cols=76 Identities=24% Similarity=0.245 Sum_probs=71.1
Q ss_pred CCCcccCCCCCcchHHHHHHHHHHHHHHHHhCCCcccChhHhhhccC------------CCCCCCCCchHHHHHHHHHcC
Q 043774 141 IVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDT------------TSYGCDGGYMDYAFEWVINNG 208 (485)
Q Consensus 141 ~vtpVkdQg~CGsCwAfA~~~~lE~~~~i~~~~~~~LS~Q~l~dC~~------------~~~gC~GG~~~~a~~~~~~~~ 208 (485)
.++||||||+||||||||+++++|+.+++++++.+.||+|+|+||+. .+.||+||.+..|+.|+.++
T Consensus 21 ~vtpVknQg~cGsCWaFSa~~~lE~~~~~k~~~~~~LSeq~Lvdcd~~ekan~~l~~~g~~~gcdGG~~~~a~~~i~k~- 99 (383)
T 3pw3_A 21 PITSVKNQNRAGTCWCYSSYSFLESELLRMGKGEYDLSEMFTVYNTYLDRADAAVRTHGDVSFSQGGSFYDALYGMETF- 99 (383)
T ss_dssp CCCCCCBCCBSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHHHHHHHHHHHHHTTTCSCCCSCCCHHHHHHHHHHT-
T ss_pred CCCCcccCCCCcHHHHHHhHHHHHHHHHHHcCCCCccChHHHHhhchhhhhhhhhhhccCCCCCCCCCHHHHHHHHHHc-
Confidence 37999999999999999999999999999999999999999999974 25799999999999999876
Q ss_pred CcCCCCccc
Q 043774 209 GIDTESDYP 217 (485)
Q Consensus 209 Gi~~e~~yP 217 (485)
||++|++||
T Consensus 100 Givpe~~YP 108 (383)
T 3pw3_A 100 GLVPEEEMR 108 (383)
T ss_dssp CCCBGGGSC
T ss_pred CcCcHHhCC
Confidence 999999999
No 44
>2jye_A Granulin A; epithelin, human, stack of hairpins, alternative splicing, cytokine, glycoprotein, polymorphism, secreted; NMR {Homo sapiens}
Probab=99.92 E-value=7.9e-26 Score=174.02 Aligned_cols=63 Identities=38% Similarity=1.003 Sum_probs=59.6
Q ss_pred CCCCCCCCCCCCCCCeeceecCCCcccccccCcCCCCceecCCCCCCCCCCCCCcCCCCCccccccCCc
Q 043774 376 SPTQCGDFSYCPSGETCCCIFGFLDFCWIYGCCPYENAVCCSGTQDCCPADYPICDIEEGLCLKKYGDY 444 (485)
Q Consensus 376 ~~~~c~~~~~c~~~~tcc~~~~~~~~~~~~~ccp~~~~~cc~d~~hccp~g~~~c~~~~~~c~~~~~~~ 444 (485)
++++||++++||+++|||++.+| .||||||++||||+|++||||+|| +||++.++|+++.++.
T Consensus 2 ~~v~Cd~~~~Cp~~~TCC~~~~g-----~wgCCPl~~AvCC~D~~hCCP~gy-~Cd~~~g~C~~~~~~~ 64 (72)
T 2jye_A 2 MDVKCDMEVSCPDGYTCCRLQSG-----AWGCCPFTQAVCCEDHIHCCPAGF-TCDTQKGTCEQKLAAA 64 (72)
T ss_dssp CSCCSSTTCCCCTTCCEEECSSS-----SEEECCSSSSTTSSSSSCSSCSSC-CEETTTTEECSSSCSS
T ss_pred CceeCCCCCCCCCCCcccCCCCC-----CCccCCCCCCCccCCCCccCCCCC-eeCCCCCeEeCCCCCc
Confidence 46899999999999999999998 899999999999999999999999 9999999999987664
No 45
>2jyv_A Granulin-2, granulin F; granulin C, epithelin, human, stack of hairpins, alternative splicing, cytokine, glycoprotein, polymorphism, secreted; NMR {Homo sapiens}
Probab=99.89 E-value=1.4e-24 Score=167.15 Aligned_cols=63 Identities=33% Similarity=0.856 Sum_probs=28.3
Q ss_pred CCCCC-CCCCCCCCCCeeceecCCCcccccccCcCCCCceecCCCCCCCCCCCCCcCCCCCccccccCCc
Q 043774 376 SPTQC-GDFSYCPSGETCCCIFGFLDFCWIYGCCPYENAVCCSGTQDCCPADYPICDIEEGLCLKKYGDY 444 (485)
Q Consensus 376 ~~~~c-~~~~~c~~~~tcc~~~~~~~~~~~~~ccp~~~~~cc~d~~hccp~g~~~c~~~~~~c~~~~~~~ 444 (485)
..++| |+.++||+++|||++..| .||||||++||||+||+||||+|| +||+..++|+++++..
T Consensus 2 ~~v~CpD~~~~Cp~~~TCC~~~~g-----~wgCCPl~~AvCC~D~~hCCP~gy-~Cd~~~g~C~~~~~~~ 65 (72)
T 2jyv_A 2 MAIQCPDSQFECPDFSTCCVMVDG-----SWGCCPMPQASCCEDRVHCCPHGA-FCDLVHTRCIKLAAAL 65 (72)
T ss_dssp -CBCCSSCSSCBCTTEEEEECSSS-----CEEEEECCC--------------------------------
T ss_pred CeeECCCCCcCCCCCCcccCCCCC-----CEeccCCCCCCcCCCCCccCCCcC-eeCCCCCEEeCCCCCc
Confidence 35799 666899999999999887 999999999999999999999999 9999999999988764
No 46
>2jyt_A Granulin-5, granulin C; epithelin, human, stack of hairpins, alternative splicing, cytokine, glycoprotein, polymorphism, secreted; NMR {Homo sapiens} PDB: 2jyu_A
Probab=99.89 E-value=4.6e-24 Score=162.62 Aligned_cols=60 Identities=45% Similarity=1.060 Sum_probs=52.7
Q ss_pred CCCCCCCCCCCCCCeeceecCCCcccccccCcCCCCceecCCCCCCCCCCCCCcCCCCCccccccCC
Q 043774 377 PTQCGDFSYCPSGETCCCIFGFLDFCWIYGCCPYENAVCCSGTQDCCPADYPICDIEEGLCLKKYGD 443 (485)
Q Consensus 377 ~~~c~~~~~c~~~~tcc~~~~~~~~~~~~~ccp~~~~~cc~d~~hccp~g~~~c~~~~~~c~~~~~~ 443 (485)
+++||+.++||+++|||++++| .||||||++||||+|++||||+|| +|+ ..|+|+++++.
T Consensus 2 ~v~Cd~~~~CP~~~TCC~~~~G-----~wgCCPl~~AvCC~D~~hCCP~gy-~C~-~~g~C~k~~~~ 61 (69)
T 2jyt_A 2 MVPCDNVSSCPSSDTCCQLTSG-----EWGCCPIPEAVCCSDHQHCCPQGY-TCV-AEGQCQKLAAA 61 (69)
T ss_dssp -CCSCSSCCCCSSCEEEECSSS-----CEEEECCCCCCCCSSTTCCCSTTC-EEE-TTTEEEC----
T ss_pred cccCCCccCCCCCCeecCCCCC-----CCccCcCCCCCcCCCCCccCCCCC-eeC-CCCcCcCCCcc
Confidence 5799999999999999999998 999999999999999999999999 996 56899987654
No 47
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii}
Probab=99.74 E-value=3.8e-18 Score=144.03 Aligned_cols=76 Identities=30% Similarity=0.475 Sum_probs=70.2
Q ss_pred CCChHHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhcCCCCCeEEecccCCCCCHHHHHHHHhhccc
Q 043774 32 FVSEERVFELFQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVEKKNNPGGHVVGLNKFADMSNEEFREIYLKKIQ 107 (485)
Q Consensus 32 ~~~~~~~~~~F~~f~~~~~k~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~~~s~~~g~N~FsDlt~eEf~~~~~~~~~ 107 (485)
..++..+..+|++|+++|+|.|.+..|+.+|+.||++|+++|++||+.+.+|++|+|+|+|||.+||++.|++...
T Consensus 15 ~~~~~~~~~~F~~wk~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~hN~~~~sy~lglN~FaDLT~eEF~~~~lg~~~ 90 (106)
T 3f75_P 15 EWKEAHFQDAFSSFQAMYAKSYATEEEKQRRYAIFKNNLVYIHTHNQQGYSYSLKMNHFGDLSRDEFRRKYLGFKK 90 (106)
T ss_dssp -CCHHHHHHHHHHHHHHHTCCCSSHHHHHHHHHHHHHHHHHHHHHHTSCCSEEECCCTTTTCCHHHHHHHSCCBCC
T ss_pred ccCcHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCeeeCCcccccCCHHHHHHHHcCCCC
Confidence 3567889999999999999999999999999999999999999999988899999999999999999999887653
No 48
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster}
Probab=99.67 E-value=8e-17 Score=129.64 Aligned_cols=65 Identities=28% Similarity=0.402 Sum_probs=59.5
Q ss_pred HHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhcC----CCCCeEEecccCCCCCHHHHHHHHhhcc
Q 043774 40 ELFQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVEKKN----NPGGHVVGLNKFADMSNEEFREIYLKKI 106 (485)
Q Consensus 40 ~~F~~f~~~~~k~Y~~~~E~~~R~~iF~~Nl~~I~~~N~----~~~s~~~g~N~FsDlt~eEf~~~~~~~~ 106 (485)
..|++|+.+|+|.|.+.+|+.+| .||++|+++|++||+ ++.+|++|+|+|+|||.+|| +.+++..
T Consensus 8 ~~f~~~k~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlT~eEf-~~~~g~~ 76 (80)
T 2l95_A 8 EEWVEYKSKFDKNYEAEEDLMRR-RIYAESKARIEEHNRKFEKGEVTWKMGINHLADLTPEEF-AQRSGKK 76 (80)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHTTGGGTSCCCCCCCCGGGTSSHHHH-HHHHTSC
T ss_pred HHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHhccCCCCeEecCcccccCCHHHH-HHHhCCC
Confidence 57999999999999988899999 999999999999997 35789999999999999999 8887654
No 49
>1fwo_A Oryzain beta chain; beta-hairpin stack fold, granulin/epithelin-like protein repeats, hydrolase; NMR {Synthetic} SCOP: g.3.16.1
Probab=99.39 E-value=1.3e-13 Score=91.06 Aligned_cols=35 Identities=40% Similarity=0.989 Sum_probs=33.0
Q ss_pred CCCCCCCCCCCCCCeeceecCCCcccccccCcCCC
Q 043774 377 PTQCGDFSYCPSGETCCCIFGFLDFCWIYGCCPYE 411 (485)
Q Consensus 377 ~~~c~~~~~c~~~~tcc~~~~~~~~~~~~~ccp~~ 411 (485)
+++||+.++||+++||||+...+++|+.|||||++
T Consensus 1 ~~~CD~~~sCP~~~TCCc~~~~~~~C~~WGCCPle 35 (35)
T 1fwo_A 1 DHVCDDNFSCPAGSTCSSAFGFRNLSLVWGCSPVE 35 (35)
T ss_dssp CCCSSSSCCCCSSSEECCCCCSSCSSCCCCEECCC
T ss_pred CccCCCcccCCCCCcEEeeeccCCccceEeCccCC
Confidence 36899999999999999999999999999999985
No 50
>1i8x_A Granulin-1; two beta-hairpin stack, cytokine; NMR {Synthetic} SCOP: g.3.16.1 PDB: 1qgm_A 1i8y_A
Probab=99.20 E-value=4.2e-12 Score=80.90 Aligned_cols=29 Identities=28% Similarity=0.713 Sum_probs=27.4
Q ss_pred CCCCCCCCCCCCCeeceecCCCcccccccCcCCC
Q 043774 378 TQCGDFSYCPSGETCCCIFGFLDFCWIYGCCPYE 411 (485)
Q Consensus 378 ~~c~~~~~c~~~~tcc~~~~~~~~~~~~~ccp~~ 411 (485)
++||++++||+++|||++..| .|||||++
T Consensus 2 v~CD~~~~CP~~~TCC~~~~G-----~WGCCP~~ 30 (30)
T 1i8x_A 2 IHCDAATICPDGTTCSLSPYG-----VWYCSPFS 30 (30)
T ss_dssp CCTTTTCCCCTTEEEEECTTS-----CEEEEECC
T ss_pred ccCCCCccCCCCCeeeccCCC-----CEecCcCC
Confidence 689999999999999999998 99999986
No 51
>1g26_A Granulin A, HGA; granulin/epithelin protein repeats, beta-hairpin stack, cytokine; NMR {Synthetic} SCOP: g.3.16.1
Probab=99.14 E-value=2.3e-12 Score=83.16 Aligned_cols=31 Identities=35% Similarity=0.963 Sum_probs=28.6
Q ss_pred CCCCCCCCCCCCCCeeceecCCCcccccccCcCCCC
Q 043774 377 PTQCGDFSYCPSGETCCCIFGFLDFCWIYGCCPYEN 412 (485)
Q Consensus 377 ~~~c~~~~~c~~~~tcc~~~~~~~~~~~~~ccp~~~ 412 (485)
+++||++++||+++|||+++.| .|||||+++
T Consensus 1 ~v~Cd~~~~Cp~~~TCC~~~~g-----~wgCCP~~~ 31 (31)
T 1g26_A 1 VVHCDMEVICPDGYTCCRLPSG-----AWGCCPFTQ 31 (31)
T ss_dssp CEEEETTEEECTTEEEEECTTS-----CEEEEECCC
T ss_pred CeeCCCCCccCCCCeecCCCCC-----CeEcCCCCC
Confidence 3689999999999999999988 999999985
No 52
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A
Probab=96.50 E-value=0.067 Score=48.16 Aligned_cols=128 Identities=19% Similarity=0.204 Sum_probs=85.4
Q ss_pred CCCCCcchHHHHHHHHHHHHHH--------HHhCCCcccChhHhhhccCCCCCCCCCchHHHHHHHHHcCCcCCCCcccc
Q 043774 147 DQGSCGSCWSFSTTGAIEGINA--------LVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPY 218 (485)
Q Consensus 147 dQg~CGsCwAfA~~~~lE~~~~--------i~~~~~~~LS~Q~l~dC~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY 218 (485)
.||.-+=|-+|+.++.|-.... +.+.-...+|+|+|.+ .|..+...++|+... |....
T Consensus 26 TQg~~~WCa~Y~~aAilN~~~nt~~~nA~~iMr~~yPN~s~~~l~~--------t~~~~~q~Iky~~s~-G~~~~----- 91 (183)
T 1pxv_A 26 QQFDNSWAAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPN--------CATFPNQMIEYGKSQ-GRDIH----- 91 (183)
T ss_dssp CCCSSSCHHHHHHHHHHHHHHTCSCCCHHHHHHHHSTTSCTTTGGG--------CCBCHHHHHHHHHHT-TCCCE-----
T ss_pred ccCcCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhh--------cCCCHHHHHHHHHHc-CcChh-----
Confidence 4999999999999998765431 1111235689998888 456788899998644 43210
Q ss_pred CCCCCCccCCccCcceEEecceeecCCCHHHHHHHHHc-CCeEEEEeccCccccccCCCeeeCCCCCCCCccCeEEEEEE
Q 043774 219 TGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQ-QPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVG 297 (485)
Q Consensus 219 ~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~l~~al~~-gPV~v~i~~~~~~f~~Y~sGIy~~~c~~~~~~~~HaV~iVG 297 (485)
+..-..+-+.+++.+.+ .||.|...-.. . +.+....+||++|||
T Consensus 92 ---------------------~~nr~ls~neV~~~i~~Nk~I~v~~~~v~-----------e---~~~~~~~gHA~av~G 136 (183)
T 1pxv_A 92 ---------------------YQEGVPSYNQVDQLTKDNVGIMILAQSVS-----------Q---NPNDPHLGHALAVVG 136 (183)
T ss_dssp ---------------------EEESCCCHHHHHHHHHTTCCEEEEEECCC-----------S---STTSCCCEEEEEEEE
T ss_pred ---------------------HhcCCCCHHHHHHHHhcCCcEEEEccccc-----------c---CCCCccCceeEEEEe
Confidence 00001356778888886 59887665321 1 112236799999999
Q ss_pred eeecCCeeEEEEEcCCCCCCCCCceEEEEeC
Q 043774 298 YGSENGEDYWIVKNSWGTSWGIDGYFYITRD 328 (485)
Q Consensus 298 yg~~~g~~yWivkNSWG~~WGe~GY~ri~r~ 328 (485)
|-.-++.+|.+|=|=|-. |++-++-+
T Consensus 137 ya~~~~~~~y~~WNPW~~-----~~~~~~a~ 162 (183)
T 1pxv_A 137 NAKINDQEKLIYWNPWDT-----ELSIQDAD 162 (183)
T ss_dssp EEEETTEEEEEEECTTCS-----SCEEEETT
T ss_pred eeecCCCeEEEEeCCccC-----CcEeecCC
Confidence 997778899999776643 77777644
No 53
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4
Probab=96.07 E-value=0.17 Score=50.17 Aligned_cols=128 Identities=18% Similarity=0.198 Sum_probs=83.8
Q ss_pred cCCCCCcchHHHHHHHHHHHHH--------HHHhCCCcccChhHhhhccCCCCCCCCCchHHHHHHHHHcCCcCCCCccc
Q 043774 146 KDQGSCGSCWSFSTTGAIEGIN--------ALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYP 217 (485)
Q Consensus 146 kdQg~CGsCwAfA~~~~lE~~~--------~i~~~~~~~LS~Q~l~dC~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yP 217 (485)
..||.-+=|-+|+.+++|-... .+.+.-...+|+++|.+ .|..+...++|+... |...
T Consensus 201 ETQg~~pWCa~Ya~aailN~~~~t~~~nA~~iMr~~yPN~S~~~l~~--------ts~~~~q~Iky~qsy-G~~~----- 266 (367)
T 1x9y_A 201 EQQFDNSWCAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPN--------CATFPNQMIEYGKSQ-GRDI----- 266 (367)
T ss_dssp CCCSSSSCHHHHHHHHHHHHHTTCSCCCHHHHHHHHCTTSCTTTGGG--------CCCCHHHHHHHHHHT-TEEE-----
T ss_pred eccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhh--------cCCCHHHHHHHHHHh-Ccch-----
Confidence 3689999999999999876543 11111235688888888 456788899998744 4311
Q ss_pred cCCCCCCccCCccCcceEEecceeecCCCHHHHHHHHHc-CCeEEEEeccCccccccCCCeeeCCCCCCCCccCeEEEEE
Q 043774 218 YTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQ-QPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIV 296 (485)
Q Consensus 218 Y~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~l~~al~~-gPV~v~i~~~~~~f~~Y~sGIy~~~c~~~~~~~~HaV~iV 296 (485)
. +..-..+-+.+++.+.. .||.|.+...... .+....+|||+||
T Consensus 267 --------------------~-~~n~~ls~deVk~~id~Nk~I~v~~~~v~~~--------------~n~~~~gHAlavv 311 (367)
T 1x9y_A 267 --------------------H-YQEGVPSYNQVDQLTKDNVGIMILAQSVSQN--------------PNDPHLGHALAVV 311 (367)
T ss_dssp --------------------E-EEESCCCHHHHHHHHHTTCCEEEEEEETTSC--------------SSSCCCSEEEEEE
T ss_pred --------------------h-hhcCCCCHHHHHHHHhcCCcEEEEccccccC--------------CCCccCceeEEEE
Confidence 0 11111356677888875 6998887753211 1123568999999
Q ss_pred EeeecCCeeEEEEEcCCCCCCCCCceEEEEe
Q 043774 297 GYGSENGEDYWIVKNSWGTSWGIDGYFYITR 327 (485)
Q Consensus 297 Gyg~~~g~~yWivkNSWG~~WGe~GY~ri~r 327 (485)
||-..++.+|.++-|=| |.+ ++-++-
T Consensus 312 GyA~~~~~~~y~~WNPW---~~~--~~~~sa 337 (367)
T 1x9y_A 312 GNAKINDQEKLIYWNPW---DTE--LSIQDA 337 (367)
T ss_dssp EEEEETTEEEEEEECTT---CSS--CEEEET
T ss_pred eccccCCCcEEEEecCc---cCC--ceeecC
Confidence 99876688999996655 433 665554
No 54
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1
Probab=95.38 E-value=0.39 Score=43.06 Aligned_cols=118 Identities=15% Similarity=0.163 Sum_probs=77.5
Q ss_pred CCCCCcchHHHHHHHHHHHHHH--------HHhCCCcccChhHhhhccCCCCCCCCCchHHHHHHHHHcCCcCCCCcccc
Q 043774 147 DQGSCGSCWSFSTTGAIEGINA--------LVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPY 218 (485)
Q Consensus 147 dQg~CGsCwAfA~~~~lE~~~~--------i~~~~~~~LS~Q~l~dC~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY 218 (485)
.||.-+=|-+|+.+++|-.... +.+.-...+|+++|... |..+...++|+...+ -..
T Consensus 17 TQg~~pWCa~Ya~aailN~~~~~~~~~A~~imr~~yPn~S~~~l~~~--------~~t~~e~iky~~s~g-~~~------ 81 (174)
T 1cv8_A 17 TQGNNGWCAGYTMSALLNATYNTNKYHAEAVMRFLHPNLQGQQFQFT--------GLTPREMIYFGQTQG-RSP------ 81 (174)
T ss_dssp CCCSSSCHHHHHHHHHHHHHHTCCCCCHHHHHHHHCSSCCHHHHHHC--------CCCHHHHHHHHHHTT-CCC------
T ss_pred ccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCCHHHHhhc--------CCCHHHHHHHHHHcC-CCh------
Confidence 4999899999999998865431 11122357999999953 456788889976653 210
Q ss_pred CCCCCCccCCccCcceEEecceeecCCCHHHHHHHHHc-CCeEEEEeccCccccccCCCeeeCCCCCCCCccCeEEEEEE
Q 043774 219 TGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQ-QPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVG 297 (485)
Q Consensus 219 ~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~l~~al~~-gPV~v~i~~~~~~f~~Y~sGIy~~~c~~~~~~~~HaV~iVG 297 (485)
... .+ ..+-+.+++++.+ .|+.|..+-. + . .+....+||++|||
T Consensus 82 ---------~~~-------n~----~ls~~eV~~~~~~nk~i~i~~~~v-e----~----------~~~~~~gHAlav~G 126 (174)
T 1cv8_A 82 ---------QLL-------NR----MTTYNEVDNLTKNNKGIAILGSRV-E----S----------RNGMHAGHAMAVVG 126 (174)
T ss_dssp ---------EEE-------SS----CCCHHHHHHHHHTTCCEEEEEEES-S----C----------BTTBCCEEEEEEEE
T ss_pred ---------hhh-------cC----CCCHHHHHHHHhcCCceEEEcccc-c----C----------CCCCCCceeEEEEe
Confidence 000 00 1256778888886 5887766542 1 0 11125689999999
Q ss_pred eee-cCCeeEEEEEcCCC
Q 043774 298 YGS-ENGEDYWIVKNSWG 314 (485)
Q Consensus 298 yg~-~~g~~yWivkNSWG 314 (485)
|-. .+|.+|.++=|=|-
T Consensus 127 y~~~~ng~~~y~~WNPW~ 144 (174)
T 1cv8_A 127 NAKLNNGQEVIIIWNPWD 144 (174)
T ss_dssp EEEETTSCEEEEEECTTC
T ss_pred eeeecCCceEEEEeCCcc
Confidence 996 57889999977663
No 55
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis}
Probab=78.03 E-value=5.9 Score=37.39 Aligned_cols=59 Identities=19% Similarity=0.340 Sum_probs=34.9
Q ss_pred CCHHHHHHHHHcC-CeEEEEeccCc-----ccccc--CCCeeeCCCCCCCCccCeEEEEEEeeecCCeeEEEEEcCC
Q 043774 245 PSDSALLCAAVQQ-PISVGMVGSAS-----DFQLY--TSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSW 313 (485)
Q Consensus 245 ~~~~~l~~al~~g-PV~v~i~~~~~-----~f~~Y--~sGIy~~~c~~~~~~~~HaV~iVGyg~~~g~~yWivkNSW 313 (485)
.+.++|++.|.+| ||.|-+..... .|..+ .+|-+.. ...+|+|+|+||++. ..+|-+.+
T Consensus 130 ~sl~~L~~~I~~G~PVIv~~t~~~~p~~~~~~~~W~~~~G~~~~------~~~~H~VVl~GYd~~----~vyi~DP~ 196 (236)
T 3erv_A 130 KSIEELYKSVKAGQPVVIITNATFAPLDEDEFTTWETNNGDVSI------TYNEHCVVLIGYDQE----SVYIRDPL 196 (236)
T ss_dssp SCHHHHHHHHHTTCCEEEEEETTSSCCCGGGCEEEEETTEEEEE------CTTEEEEEEEEECSS----EEEEECTT
T ss_pred CCHHHHHHHHHCCCeEEEEEeCCcccccccccceeecCCCceee------ccCCeEEEEEEEeCC----EEEEECCC
Confidence 4789999999987 99887654211 11111 1222111 124799999999752 34444544
No 56
>4d8b_A Streptopain; papain fold, cysteine protease, secreted, hydrolase; 1.06A {Streptococcus pyogenes} PDB: 4d8e_A* 4d8i_A* 2uzj_A* 2jtc_A
Probab=54.32 E-value=14 Score=35.34 Aligned_cols=52 Identities=33% Similarity=0.657 Sum_probs=34.6
Q ss_pred HHHHHHHHc-CCeEEEEeccCccccccCCCeeeCCCCCCCCccCeEEEEEEeeecCCeeEEEEEcCCCCCCC--CCceEE
Q 043774 248 SALLCAAVQ-QPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWG--IDGYFY 324 (485)
Q Consensus 248 ~~l~~al~~-gPV~v~i~~~~~~f~~Y~sGIy~~~c~~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WG--e~GY~r 324 (485)
+.|+..|.+ .||.+.-.. . .++||.+|=||..+ +|+-| -|| || .+|||.
T Consensus 172 ~~I~~eL~~grPV~~~G~~------------------~---~gGHAwViDGY~~~---~~~H~--NwG--WgG~~nGYy~ 223 (261)
T 4d8b_A 172 AQIDKELSQNQPVYYQGVG------------------K---VGGHAFVIDGADGR---NFYHV--NWG--WGGVSDGFFR 223 (261)
T ss_dssp HHHHHHHHTTCCEEEEEEE------------------T---TEEEEEEEEEEESS---SCEEE--ECS--STTTTCEEEC
T ss_pred HHHHHHHHcCCCEEEEeec------------------C---CCceEEEEcccccC---CEEEE--EcC--CCCCCCceee
Confidence 567777776 498764321 1 36899999999743 45554 354 44 489999
Q ss_pred EEe
Q 043774 325 ITR 327 (485)
Q Consensus 325 i~r 327 (485)
+.-
T Consensus 224 l~~ 226 (261)
T 4d8b_A 224 LDA 226 (261)
T ss_dssp TTC
T ss_pred ccc
Confidence 864
No 57
>2vwa_A Putative uncharacterized protein PF13_0012; unknown function; HET: PTY; 2.5A {Plasmodium falciparum}
Probab=37.99 E-value=15 Score=29.05 Aligned_cols=27 Identities=26% Similarity=0.582 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCeEEecccCCCCCHHH
Q 043774 59 AERRFRNFKNNLEYVVEKKNNPGGHVVGLNKFADMSNEE 97 (485)
Q Consensus 59 ~~~R~~iF~~Nl~~I~~~N~~~~s~~~g~N~FsDlt~eE 97 (485)
-.+||.+|.+|++...+|- |++|+.++
T Consensus 20 piKrfN~F~Dn~rla~qhH------------F~~LSn~Q 46 (101)
T 2vwa_A 20 SIKRYNNFVDIARLSIQKH------------FEHLSNDQ 46 (101)
T ss_dssp CHHHHHHHHHHHHHHHHHH------------HHHSCHHH
T ss_pred cHHHHHHHHHHHHHHHHHH------------HHhcCcHH
Confidence 4689999999999876664 78888775
No 58
>1q2j_A MU-conotoxin SMIIIA; HET: PCA; NMR {Synthetic} SCOP: j.30.1.1 PDB: 2yen_A*
Probab=37.35 E-value=16 Score=21.79 Aligned_cols=20 Identities=25% Similarity=0.830 Sum_probs=11.5
Q ss_pred cCcCCCCc---eecCCCCCCCCC
Q 043774 406 GCCPYENA---VCCSGTQDCCPA 425 (485)
Q Consensus 406 ~ccp~~~~---~cc~d~~hccp~ 425 (485)
+||-.|++ -=|.||..||-.
T Consensus 2 ~CC~~pngCs~rWCrdharCc~~ 24 (26)
T 1q2j_A 2 RCCNGRRGCSSRWCRDHSRCCXX 24 (26)
T ss_dssp CSCSSSSCCCSSSSSSSSSCC--
T ss_pred CccCCCCcccchhhcccceeccc
Confidence 35554444 347888888853
No 59
>1omc_A Omega-conotoxin GVIA; presynaptic neurotoxin; HET: HYP; NMR {Conus geographus} SCOP: g.3.6.1 PDB: 1ttl_A* 2cco_A* 1tr6_A*
Probab=34.95 E-value=15 Score=22.45 Aligned_cols=20 Identities=30% Similarity=0.609 Sum_probs=14.7
Q ss_pred cCCCCCCCCCCCCCcCCCCCccc
Q 043774 416 CSGTQDCCPADYPICDIEEGLCL 438 (485)
Q Consensus 416 c~d~~hccp~g~~~c~~~~~~c~ 438 (485)
|.-+.||| .++ |+....+|+
T Consensus 8 C~~~~~CC-s~~--C~~~~~~C~ 27 (28)
T 1omc_A 8 CSPTSYNC-CRS--CNPYTKRCY 27 (28)
T ss_dssp CCTTTTCB-SSC--EETTTTEEC
T ss_pred cCCCccHH-HHH--HcchhCEeC
Confidence 45567899 554 988888884
No 60
>3iot_A Maltose-binding protein, huntingtin fusion protei; HTT-EX1, HD, sugar transport, transport, apoptos disease mutation, nucleus; 3.50A {Escherichia coli k-12} PDB: 3io6_A 3io4_A 3ior_A 3iou_A 3iov_A 3iow_A
Probab=29.27 E-value=11 Score=38.11 Aligned_cols=18 Identities=11% Similarity=0.200 Sum_probs=12.1
Q ss_pred hHHHHHHHHHHHHHhCCc
Q 043774 35 EERVFELFQRWKDKHGKA 52 (485)
Q Consensus 35 ~~~~~~~F~~f~~~~~k~ 52 (485)
...+..+.++|.++++-+
T Consensus 17 ~~~~~~~~~~F~~~~gi~ 34 (449)
T 3iot_A 17 YNGLAEVGKKFEKDTGIK 34 (449)
T ss_dssp HHHHHHHHHHHHHHHSCC
T ss_pred hHHHHHHHHHHhhccCCE
Confidence 345677778887777643
No 61
>1qk7_A Selenocosmia huwena lectin-I; SHL-I, cystine knot; NMR {Selenocosmia huwena} SCOP: g.3.6.2
Probab=27.52 E-value=23 Score=22.51 Aligned_cols=20 Identities=25% Similarity=0.826 Sum_probs=14.5
Q ss_pred CCCCCCCCCCCCCcCCCCCccc
Q 043774 417 SGTQDCCPADYPICDIEEGLCL 438 (485)
Q Consensus 417 ~d~~hccp~g~~~c~~~~~~c~ 438 (485)
.+...|| .|| +|+....-|.
T Consensus 8 ~~~~~CC-~~~-~Cs~~~kWC~ 27 (32)
T 1qk7_A 8 DYNNGCC-SGY-VCSRTWKWCV 27 (32)
T ss_dssp SSSCCCC-TTE-EECSSSCBEE
T ss_pred CCCCCcC-CCc-eeCCCCCeee
Confidence 3456678 577 8988888886
No 62
>2r9f_A Calpain-1 catalytic subunit; protease, peptidase, inhibitor, alpha-ketoamide, hydrolase, thiol protease; HET: K2Z; 1.60A {Rattus norvegicus} SCOP: d.3.1.3 PDB: 1tlo_A* 2g8e_A* 1tl9_A* 2nqg_A* 2nqi_A* 2r9c_A* 2g8j_A* 1kxr_A 2ary_A 1zcm_A* 1mdw_A
Probab=27.32 E-value=49 Score=32.66 Aligned_cols=42 Identities=21% Similarity=0.456 Sum_probs=31.7
Q ss_pred ccCeEEEEEEeeec--C--CeeEEEEEcCCCC-CC----C---------------------CCceEEEEeCC
Q 043774 288 YIDHAVLIVGYGSE--N--GEDYWIVKNSWGT-SW----G---------------------IDGYFYITRDT 329 (485)
Q Consensus 288 ~~~HaV~iVGyg~~--~--g~~yWivkNSWG~-~W----G---------------------e~GY~ri~r~~ 329 (485)
..+||-.|++..+. . +...-.|||-||. .| . ++|-|||+.+.
T Consensus 244 v~~HaYsVl~v~~v~~~~~~~~Lv~LrNPWg~~eW~G~wsd~s~~W~~~~~~~~~~l~~~~~dG~FWMs~~D 315 (339)
T 2r9f_A 244 VRGHAYSVTDAKQVTYQGQRVNLIRMRNPWGEVEWKGPWSDNSYEWNKVDPYEREQLRVKMEDGEFWMSFRD 315 (339)
T ss_dssp BTTCCEEEEEEEEEEETTEEEEEEEEECTTSCCCCCSTTSTTCGGGGGSCHHHHHHHCCCCCSSEEEEEHHH
T ss_pred cCCceEEEeEEEEEecCCCceEEEEEeCCCCCccccCCCCcCCccccccCHHHHHHhCCCCCCCEEEEEHHH
Confidence 45899999998742 2 3578899999995 33 2 56999999864
No 63
>1dki_A Pyrogenic exotoxin B zymogen; cysteine protease, papain-like; 1.60A {Streptococcus pyogenes} SCOP: d.3.1.1 PDB: 1pvj_A*
Probab=26.14 E-value=1.3e+02 Score=30.12 Aligned_cols=32 Identities=38% Similarity=0.931 Sum_probs=23.1
Q ss_pred cCeEEEEEEeeecCCeeEEEEEcCCCCCCC--CCceEEEEe
Q 043774 289 IDHAVLIVGYGSENGEDYWIVKNSWGTSWG--IDGYFYITR 327 (485)
Q Consensus 289 ~~HaV~iVGyg~~~g~~yWivkNSWG~~WG--e~GY~ri~r 327 (485)
++||.+|=||..+ +||=| -|| || .+|||.+.-
T Consensus 311 gGHAfV~DGy~~~---~~~H~--NwG--WgG~~nGyy~l~~ 344 (371)
T 1dki_A 311 GGHAFVIDGADGR---NFYHV--NWG--WGGVSDGFFRLDA 344 (371)
T ss_dssp EEEEEEEEEECSS---SEEEE--ECS--STTTTCEEEESCC
T ss_pred CceEEEECcccCC---CeEEE--EeC--cCCCCCcceeccC
Confidence 6899999999743 46555 344 44 489999863
No 64
>1ziv_A Calpain 9; cysteine protease, papain, calcium-dependent, thiol protease, structural genomics consortium, SGC, hydrolase; 2.31A {Homo sapiens} SCOP: d.3.1.3 PDB: 2p0r_A*
Probab=25.33 E-value=56 Score=32.25 Aligned_cols=28 Identities=21% Similarity=0.432 Sum_probs=22.3
Q ss_pred ccCeEEEEEEeeec----CCeeEEEEEcCCCC
Q 043774 288 YIDHAVLIVGYGSE----NGEDYWIVKNSWGT 315 (485)
Q Consensus 288 ~~~HaV~iVGyg~~----~g~~yWivkNSWG~ 315 (485)
..+||-.|++.... ++...-.|||-||.
T Consensus 243 v~~HaYsVl~v~~v~~~~~~~~Lv~LrNPWg~ 274 (339)
T 1ziv_A 243 IKGHAYSVTGIDQVSFRGQRIELIRIRNPWGQ 274 (339)
T ss_dssp BTTCCEEEEEEEEEEETTEEEEEEEEECCSSC
T ss_pred ccCeeEEEeEEEEEecCCCceEEEEecCCCCC
Confidence 45899999998743 34678899999996
No 65
>2jye_A Granulin A; epithelin, human, stack of hairpins, alternative splicing, cytokine, glycoprotein, polymorphism, secreted; NMR {Homo sapiens}
Probab=25.12 E-value=82 Score=23.88 Aligned_cols=47 Identities=23% Similarity=0.597 Sum_probs=31.1
Q ss_pred CCCCCCCeeceecCCCcccccccCcCCCCc--eecC-CCCCCCCCCCCCcCCCCCccccc
Q 043774 384 SYCPSGETCCCIFGFLDFCWIYGCCPYENA--VCCS-GTQDCCPADYPICDIEEGLCLKK 440 (485)
Q Consensus 384 ~~c~~~~tcc~~~~~~~~~~~~~ccp~~~~--~cc~-d~~hccp~g~~~c~~~~~~c~~~ 440 (485)
..|++.++|= + ..-||++..+ -||. ...-||+.++ .|=+.+-.|...
T Consensus 4 v~Cd~~~~Cp---~------~~TCC~~~~g~wgCCPl~~AvCC~D~~-hCCP~gy~Cd~~ 53 (72)
T 2jye_A 4 VKCDMEVSCP---D------GYTCCRLQSGAWGCCPFTQAVCCEDHI-HCCPAGFTCDTQ 53 (72)
T ss_dssp CCSSTTCCCC---T------TCCEEECSSSSEEECCSSSSTTSSSSS-CSSCSSCCEETT
T ss_pred eeCCCCCCCC---C------CCcccCCCCCCCccCCCCCCCccCCCC-ccCCCCCeeCCC
Confidence 5688777752 3 3667777776 4553 5557888888 676777777643
No 66
>2nqa_A Calpain 8; calpain, calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC; HET: AR7; 2.20A {Homo sapiens}
Probab=23.40 E-value=63 Score=31.62 Aligned_cols=28 Identities=25% Similarity=0.442 Sum_probs=21.8
Q ss_pred ccCeEEEEEEeeec--C--CeeEEEEEcCCCC
Q 043774 288 YIDHAVLIVGYGSE--N--GEDYWIVKNSWGT 315 (485)
Q Consensus 288 ~~~HaV~iVGyg~~--~--g~~yWivkNSWG~ 315 (485)
..+||-.|++.... . +...-.|||=||.
T Consensus 239 v~~HaYsVl~v~~v~~~~~~~~lv~lrNPWg~ 270 (326)
T 2nqa_A 239 VKSHAYSVTGVEEVNFQGHPEKLIRLRNPWGE 270 (326)
T ss_dssp BSSCCEEEEEEEEEEETTEEEEEEEEECTTCC
T ss_pred ccCceEEEEEEEEEecCCCceEEEEecCCCcC
Confidence 45899999998742 2 3568899999995
No 67
>1p1p_A AA-conotoxin PIVA; neurotoxin, acetylcholine receptor binding, transcription regulation; HET: HYP; NMR {Conus purpurascens} SCOP: j.30.1.3
Probab=22.61 E-value=28 Score=20.46 Aligned_cols=10 Identities=70% Similarity=1.766 Sum_probs=7.6
Q ss_pred cCcC-CCCcee
Q 043774 406 GCCP-YENAVC 415 (485)
Q Consensus 406 ~ccp-~~~~~c 415 (485)
|||. ||||.|
T Consensus 1 gccg~ypnaac 11 (26)
T 1p1p_A 1 GCCGSYPNAAC 11 (26)
T ss_dssp CCSTTSCCSSC
T ss_pred CccccCCCccc
Confidence 5776 888887
Done!