Your job contains 1 sequence.
>043775
MVQRRLIEFDEGWEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMCSQNTPNNNS
ASCKRRNIPGFDEFGLACFRDLVYDALKHKAKDAVIDEREREQVDRALLANVLDIFVEHM
LQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKVQHELL
VVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAGPHDNYMEYVTNCFMDHSLFQ
RALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSGNEKLSDEAIEETLEKVVKVLVYIS
DKDLFAEFYRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWP
SYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELI
ISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSILYYKILIKEPDTKSISR
SDYFELNSKFTDRMRGSRSLSHHRKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLIS
QDYLERYPENPNTF
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 043775
(554 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2132377 - symbol:CUL1 "cullin 1" species:3702 ... 628 5.2e-146 4
TAIR|locus:2018645 - symbol:AT1G43140 species:3702 "Arabi... 875 5.0e-142 3
TAIR|locus:2024755 - symbol:CUL2 "cullin 2" species:3702 ... 542 1.5e-117 4
RGD|1564494 - symbol:Cul4b "cullin 4B" species:10116 "Rat... 360 6.0e-53 4
DICTYBASE|DDB_G0284903 - symbol:culC "cullin C" species:4... 232 2.0e-47 4
MGI|MGI:1919834 - symbol:Cul4b "cullin 4B" species:10090 ... 237 4.2e-47 5
TAIR|locus:2025881 - symbol:AT1G59790 species:3702 "Arabi... 336 8.0e-47 3
UNIPROTKB|K4DI93 - symbol:CUL4B "Cullin 4B, isoform CRA_e... 238 1.2e-46 5
UNIPROTKB|Q13620 - symbol:CUL4B "Cullin-4B" species:9606 ... 238 1.4e-46 5
UNIPROTKB|E1BQK9 - symbol:CUL4B "Uncharacterized protein"... 234 2.0e-46 5
UNIPROTKB|E1BFD5 - symbol:CUL4B "Uncharacterized protein"... 238 2.1e-46 5
UNIPROTKB|E2RMN1 - symbol:CUL4B "Uncharacterized protein"... 238 2.3e-46 5
ZFIN|ZDB-GENE-041008-208 - symbol:cul4b "cullin 4B" speci... 225 1.1e-45 4
UNIPROTKB|F1P2U1 - symbol:CUL4A "Uncharacterized protein"... 233 2.9e-45 4
UNIPROTKB|F1Q284 - symbol:CUL4A "Uncharacterized protein"... 229 6.9e-44 4
MGI|MGI:1914487 - symbol:Cul4a "cullin 4A" species:10090 ... 229 8.6e-44 4
UNIPROTKB|Q13619 - symbol:CUL4A "Cullin-4A" species:9606 ... 223 1.1e-43 4
UNIPROTKB|F1N3S4 - symbol:CUL4A "Uncharacterized protein"... 226 5.7e-43 4
FB|FBgn0033260 - symbol:Cul-4 "Cullin-4" species:7227 "Dr... 249 9.3e-43 5
UNIPROTKB|F1RN43 - symbol:CUL4A "Uncharacterized protein"... 227 1.0e-42 4
TAIR|locus:2200670 - symbol:CUL3 "AT1G26830" species:3702... 208 4.5e-40 4
TAIR|locus:2162060 - symbol:CUL4 "cullin4" species:3702 "... 241 5.4e-39 4
TAIR|locus:2205020 - symbol:CUL3B "AT1G69670" species:370... 207 1.3e-38 4
UNIPROTKB|G3N0Q3 - symbol:G3N0Q3 "Uncharacterized protein... 160 1.3e-35 5
ZFIN|ZDB-GENE-040426-1357 - symbol:cul4a "cullin 4A" spec... 213 6.1e-35 3
UNIPROTKB|E1BYQ3 - symbol:CUL3 "Uncharacterized protein" ... 132 1.7e-34 5
UNIPROTKB|F1PU58 - symbol:CUL3 "Uncharacterized protein" ... 132 1.8e-34 5
UNIPROTKB|Q6GPF3 - symbol:cul3b "Cullin-3-B" species:8355... 133 2.0e-34 5
UNIPROTKB|E1BIN5 - symbol:CUL3 "Uncharacterized protein" ... 132 2.0e-34 5
UNIPROTKB|Q6DE95 - symbol:cul3a "Cullin-3-A" species:8355... 132 2.0e-34 5
ZFIN|ZDB-GENE-030131-3376 - symbol:cul3a "cullin 3a" spec... 136 2.2e-34 5
UNIPROTKB|A4IHP4 - symbol:cul3 "Cullin-3" species:8364 "X... 132 2.6e-34 5
MGI|MGI:1347360 - symbol:Cul3 "cullin 3" species:10090 "M... 132 2.6e-34 5
RGD|1308190 - symbol:Cul3 "cullin 3" species:10116 "Rattu... 132 2.6e-34 5
ZFIN|ZDB-GENE-081007-1 - symbol:cul3b "cullin 3b" species... 131 3.3e-34 5
UNIPROTKB|Q13618 - symbol:CUL3 "Cullin-3" species:9606 "H... 132 5.2e-34 5
UNIPROTKB|F1SR61 - symbol:LOC100511787 "Uncharacterized p... 132 1.2e-33 5
UNIPROTKB|D4A0H4 - symbol:Cul2 "Cullin 2 (Predicted), iso... 230 1.6e-33 4
ZFIN|ZDB-GENE-040426-2887 - symbol:cul1b "cullin 1b" spec... 169 6.0e-33 4
FB|FBgn0261268 - symbol:Cul-3 "Cullin-3" species:7227 "Dr... 128 2.5e-32 5
UNIPROTKB|I3L5M8 - symbol:LOC100739075 "Uncharacterized p... 238 6.4e-32 3
DICTYBASE|DDB_G0267384 - symbol:culB "cullin B" species:4... 196 1.5e-31 4
UNIPROTKB|Q13616 - symbol:CUL1 "Cullin-1" species:9606 "H... 148 2.8e-31 4
UNIPROTKB|Q5R4G6 - symbol:CUL1 "Cullin-1" species:9601 "P... 148 2.8e-31 4
MGI|MGI:1349658 - symbol:Cul1 "cullin 1" species:10090 "M... 148 2.8e-31 4
RGD|1308157 - symbol:Cul1 "cullin 1" species:10116 "Rattu... 148 2.8e-31 4
UNIPROTKB|F1MYD0 - symbol:CUL1 "Uncharacterized protein" ... 148 2.8e-31 4
UNIPROTKB|E2R1V2 - symbol:CUL1 "Uncharacterized protein" ... 148 2.8e-31 4
UNIPROTKB|E1C0W8 - symbol:CUL1 "Uncharacterized protein" ... 148 2.9e-31 4
MGI|MGI:1918995 - symbol:Cul2 "cullin 2" species:10090 "M... 173 3.4e-31 5
UNIPROTKB|F1N829 - symbol:CUL2 "Uncharacterized protein" ... 176 3.9e-31 5
UNIPROTKB|F1SAD7 - symbol:CUL1 "Uncharacterized protein" ... 158 4.5e-31 4
UNIPROTKB|Q5T2B7 - symbol:CUL2 "Cullin-2" species:9606 "H... 170 6.8e-31 4
UNIPROTKB|E2QRU7 - symbol:CUL2 "Uncharacterized protein" ... 170 7.5e-31 5
UNIPROTKB|Q13617 - symbol:CUL2 "Cullin-2" species:9606 "H... 170 1.2e-30 5
RGD|1310644 - symbol:Cul2 "cullin 2" species:10116 "Rattu... 207 1.4e-30 4
UNIPROTKB|Q08DE9 - symbol:CUL2 "Uncharacterized protein" ... 168 2.1e-30 5
UNIPROTKB|Q5T2B5 - symbol:CUL2 "Cullin-2" species:9606 "H... 204 1.3e-29 4
ZFIN|ZDB-GENE-030131-8032 - symbol:cul2 "cullin 2" specie... 161 5.0e-29 5
POMBASE|SPAC17G6.12 - symbol:cul1 "cullin 1" species:4896... 167 6.8e-29 5
DICTYBASE|DDB_G0292794 - symbol:culD "cullin D" species:4... 136 1.0e-28 4
UNIPROTKB|K7GPT4 - symbol:LOC100739075 "Uncharacterized p... 238 1.1e-28 2
DICTYBASE|DDB_G0291972 - symbol:culA "cullin A" species:4... 199 2.7e-28 4
WB|WBGene00000838 - symbol:cul-3 species:6239 "Caenorhabd... 135 1.3e-27 5
UNIPROTKB|Q17391 - symbol:cul-3 "Cullin-3" species:6239 "... 135 1.3e-27 5
ASPGD|ASPL0000014731 - symbol:culC species:162425 "Emeric... 168 1.7e-27 5
UNIPROTKB|F1RUR7 - symbol:CUL2 "Uncharacterized protein" ... 170 1.3e-26 4
POMBASE|SPAC24H6.03 - symbol:cul3 "cullin 3" species:4896... 210 2.4e-26 4
POMBASE|SPAC3A11.08 - symbol:pcu4 "cullin 4" species:4896... 248 1.4e-25 4
ZFIN|ZDB-GENE-030131-2603 - symbol:cul1a "cullin 1a" spec... 151 5.9e-25 4
ASPGD|ASPL0000052453 - symbol:culD species:162425 "Emeric... 255 2.3e-24 3
DICTYBASE|DDB_G0278991 - symbol:culE "cullin E" species:4... 140 2.4e-24 5
UNIPROTKB|F1P2W9 - symbol:CUL2 "Uncharacterized protein" ... 152 7.8e-24 4
TAIR|locus:2025941 - symbol:AT1G59800 species:3702 "Arabi... 191 2.4e-23 2
FB|FBgn0015509 - symbol:lin19 "lin-19-like" species:7227 ... 154 1.9e-22 4
UNIPROTKB|G4N0J9 - symbol:MGG_07731 "Cullin-3" species:24... 138 6.2e-22 4
ASPGD|ASPL0000060435 - symbol:culA species:162425 "Emeric... 176 7.1e-22 3
ZFIN|ZDB-GENE-091113-45 - symbol:cul5b "cullin 5b" specie... 141 4.8e-21 4
WB|WBGene00000837 - symbol:cul-2 species:6239 "Caenorhabd... 135 2.5e-20 4
UNIPROTKB|Q17390 - symbol:cul-2 "Cullin-2" species:6239 "... 135 2.5e-20 4
WB|WBGene00000840 - symbol:cul-5 species:6239 "Caenorhabd... 115 7.5e-20 4
WB|WBGene00000841 - symbol:cul-6 species:6239 "Caenorhabd... 137 9.0e-20 4
WB|WBGene00000836 - symbol:cul-1 species:6239 "Caenorhabd... 143 4.5e-19 4
UNIPROTKB|F1SR60 - symbol:F1SR60 "Uncharacterized protein... 124 9.1e-19 3
UNIPROTKB|F1RUC1 - symbol:CUL4B "Uncharacterized protein"... 170 2.2e-18 3
WB|WBGene00000839 - symbol:cul-4 species:6239 "Caenorhabd... 125 1.2e-17 4
ZFIN|ZDB-GENE-030131-5426 - symbol:cul5a "cullin 5a" spec... 144 1.5e-16 3
FB|FBgn0032956 - symbol:Cul-2 "Cullin-2" species:7227 "Dr... 166 3.6e-16 3
UNIPROTKB|F1N7B5 - symbol:CUL5 "Uncharacterized protein" ... 137 4.0e-16 3
UNIPROTKB|J9PAX0 - symbol:CUL5 "Uncharacterized protein" ... 137 4.0e-16 3
UNIPROTKB|Q93034 - symbol:CUL5 "Cullin-5" species:9606 "H... 137 4.3e-16 4
UNIPROTKB|I3LFR2 - symbol:CUL5 "Uncharacterized protein" ... 137 4.3e-16 4
UNIPROTKB|F1P0F9 - symbol:CUL5 "Uncharacterized protein" ... 137 6.7e-16 4
RGD|621742 - symbol:Cul5 "cullin 5" species:10116 "Rattus... 132 1.2e-15 4
UNIPROTKB|Q9JJ31 - symbol:Cul5 "Cullin-5" species:10116 "... 132 1.2e-15 4
FB|FBgn0039632 - symbol:Cul-5 "Cullin-5" species:7227 "Dr... 111 5.4e-15 5
MGI|MGI:1922967 - symbol:Cul5 "cullin 5" species:10090 "M... 132 6.2e-15 4
CGD|CAL0000107 - symbol:CDC53 species:5476 "Candida albic... 112 6.4e-15 5
UNIPROTKB|Q5AJB7 - symbol:CDC53 "Putative uncharacterized... 112 6.4e-15 5
SGD|S000002290 - symbol:CDC53 "Cullin" species:4932 "Sacc... 95 7.2e-13 5
WARNING: Descriptions of 6 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2132377 [details] [associations]
symbol:CUL1 "cullin 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IPI] [GO:0009733 "response to
auxin stimulus" evidence=IMP] [GO:0009793 "embryo development
ending in seed dormancy" evidence=IMP] [GO:0005819 "spindle"
evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000794 "condensed nuclear
chromosome" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=IMP]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=TAS] [GO:0010265 "SCF complex assembly" evidence=IPI]
[GO:0042752 "regulation of circadian rhythm" evidence=RCA;IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0006486 "protein glycosylation" evidence=RCA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009790
"embryo development" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010431 "seed maturation" evidence=RCA]
[GO:0010564 "regulation of cell cycle process" evidence=RCA]
[GO:0043090 "amino acid import" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048316
"seed development" evidence=RCA] [GO:0048366 "leaf development"
evidence=IMP;RCA] [GO:0048825 "cotyledon development" evidence=RCA]
[GO:0051301 "cell division" evidence=RCA] [GO:0010087 "phloem or
xylem histogenesis" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005829
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0009873 GO:GO:0005819 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0042752 GO:GO:0009793 GO:GO:0016567 GO:GO:0007049
GO:GO:0000794 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 GO:GO:0000151 GO:GO:0009524 GO:GO:0009867
InterPro:IPR016159 SUPFAM:SSF74788 EMBL:AC002330 EMBL:AL161494
KO:K03347 HOGENOM:HOG000176712 EMBL:AJ318017 EMBL:AY046030
EMBL:AY133878 EMBL:AK222216 IPI:IPI00524614 PIR:T01092
RefSeq:NP_001031575.1 RefSeq:NP_001031576.1 RefSeq:NP_001190661.1
RefSeq:NP_567243.1 UniGene:At.24877 UniGene:At.67849
ProteinModelPortal:Q94AH6 SMR:Q94AH6 IntAct:Q94AH6 STRING:Q94AH6
PaxDb:Q94AH6 PRIDE:Q94AH6 EnsemblPlants:AT4G02570.1
EnsemblPlants:AT4G02570.2 EnsemblPlants:AT4G02570.3
EnsemblPlants:AT4G02570.4 GeneID:825648 KEGG:ath:AT4G02570
TAIR:At4g02570 InParanoid:Q94AH6 OMA:LDEGHEN PhylomeDB:Q94AH6
ProtClustDB:CLSN2689296 Genevestigator:Q94AH6 GermOnline:AT4G02570
GO:GO:0010265 Uniprot:Q94AH6
Length = 738
Score = 628 (226.1 bits), Expect = 5.2e-146, Sum P(4) = 5.2e-146
Identities = 120/172 (69%), Positives = 144/172 (83%)
Query: 324 TLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEV 383
TLAR+NQ FE YL N A+ GIDL+VTVL TGFWPSYKS D+N LPS+MIKCVEV
Sbjct: 479 TLARENQNSFEDYLGSNPAANPGIDLTVTVLTTGFWPSYKSFDIN----LPSEMIKCVEV 534
Query: 384 FKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQV 443
FK FYETKTKHRKL+WIYSLG CHIN KF+ K IELI+STY AA+L LFN +++LSY+++
Sbjct: 535 FKGFYETKTKHRKLTWIYSLGTCHINGKFDQKAIELIVSTYQAAVLLLFNTTDKLSYTEI 594
Query: 444 ITQLNLTHDDLVRLLHSLSILYYKILIKEPDTKSISRSDYFELNSKFTDRMR 495
+ QLNL+H+DLVRLLHSLS YKIL+KEP+TK++S++D FE NSKFTDRMR
Sbjct: 595 LAQLNLSHEDLVRLLHSLSCAKYKILLKEPNTKTVSQNDAFEFNSKFTDRMR 646
Score = 441 (160.3 bits), Expect = 5.2e-146, Sum P(4) = 5.2e-146
Identities = 104/189 (55%), Positives = 125/189 (66%)
Query: 94 AVID-EREREQVDRALLANVLDIFVE---------------HMLQDTSSYYSRISTNWIL 137
A++D ERE EQ+DRALL NVLDI+VE MLQDTSSYYSR +++WI
Sbjct: 154 ALVDKEREGEQIDRALLKNVLDIYVEIGMGQMERYEEDFESFMLQDTSSYYSRKASSWIQ 213
Query: 138 KDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVYATQLLEKEQSGCGA 197
+D CPDYM K+EECLKKER+RV+ YL S+ E KLVEKVQHELLVV+A+QLLEKE SGC A
Sbjct: 214 EDSCPDYMLKSEECLKKERERVAHYLHSSSEPKLVEKVQHELLVVFASQLLEKEHSGCRA 273
Query: 198 LFRGNKVDDLSRMYRFYRTIRAGPHDNYMEYVTNCFMDHSLFQ-RAL-KEAFKIFCNKTV 255
L R +KVDDLSRMYR Y I G +E V N F H + AL ++A N+
Sbjct: 274 LLRDDKVDDLSRMYRLYHKILRG-----LEPVANIFKQHVTAEGNALVQQAEDTATNQVA 328
Query: 256 GGFSSSEQL 264
S EQ+
Sbjct: 329 NTASVQEQV 337
Score = 379 (138.5 bits), Expect = 1.7e-139, Sum P(4) = 1.7e-139
Identities = 74/101 (73%), Positives = 80/101 (79%)
Query: 222 HDNYMEYVTNCFMDHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSGNEKLS 281
HD YM YVT CF +H+LF +ALKEAF+IFCNKTV G SS+E LATFCDNILKK G+EKLS
Sbjct: 346 HDKYMVYVTECFQNHTLFHKALKEAFEIFCNKTVAGSSSAELLATFCDNILKKGGSEKLS 405
Query: 282 DEAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRS 322
DEAI YISDKDLFAEFYRKKLARRLLFDRS
Sbjct: 406 DEAIEDTLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRS 446
Score = 207 (77.9 bits), Expect = 5.2e-146, Sum P(4) = 5.2e-146
Identities = 43/119 (36%), Positives = 69/119 (57%)
Query: 2 VQRRLIEFDEGWEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMCSQNTPNNNSA 61
++R+ I+ ++GW+Y+Q GI KLKRILEGL EP F SE+YM L+ TIYNMC+Q P++ S
Sbjct: 1 MERKTIDLEQGWDYMQTGITKLKRILEGLNEPAFDSEQYMMLYTTIYNMCTQKPPHDYSQ 60
Query: 62 SCKRRNIPGFDEFGLACFRDLVYDALKHKAKDAVIDEREREQVDRALLANVLDIFVEHM 120
+ F+E+ V AL+ K + ++ E + + ++ L F ++
Sbjct: 61 QLYDKYREAFEEY----INSTVLPALREKHDEFMLRELFKRWSNHKVMVRWLSRFFYYL 115
Score = 200 (75.5 bits), Expect = 9.2e-139, Sum P(4) = 9.2e-139
Identities = 56/134 (41%), Positives = 76/134 (56%)
Query: 65 RRNIPGFDEFGLACFRDLVYDALKHKAKDAVI---D-EREREQVDRALLANVLDIFVEHM 120
RR++P +E GL CFRDLVY+ L K K AVI D ERE EQ+DRALL NVLDI+VE
Sbjct: 122 RRSLPPLNEVGLTCFRDLVYNELHSKVKQAVIALVDKEREGEQIDRALLKNVLDIYVEIG 181
Query: 121 LQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGE--EKLVEKVQHE 178
+ Y + ++L+D Y RKA +++ D Y+ + E +K E+V H
Sbjct: 182 MGQMERYEEDFES-FMLQDTSSYYSRKASSWIQE--DSCPDYMLKSEECLKKERERVAHY 238
Query: 179 LLVVYATQLLEKEQ 192
L +L+EK Q
Sbjct: 239 LHSSSEPKLVEKVQ 252
Score = 198 (74.8 bits), Expect = 5.2e-146, Sum P(4) = 5.2e-146
Identities = 38/51 (74%), Positives = 43/51 (84%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RKVLGHQQLVSEC+E L RMFKP +KA KKR+E LI++DYLER ENPN F
Sbjct: 684 RKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMF 734
>TAIR|locus:2018645 [details] [associations]
symbol:AT1G43140 species:3702 "Arabidopsis thaliana"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 KO:K03347 EMBL:AC005687 IPI:IPI00938797
RefSeq:NP_175007.2 UniGene:At.74523 ProteinModelPortal:P0CH31
SMR:P0CH31 EnsemblPlants:AT1G43140.1 GeneID:3767291
KEGG:ath:AT1G43140 TAIR:At1g43140 HOGENOM:HOG000176712 OMA:RTISKTD
Uniprot:P0CH31
Length = 721
Score = 875 (313.1 bits), Expect = 5.0e-142, Sum P(3) = 5.0e-142
Identities = 178/286 (62%), Positives = 209/286 (73%)
Query: 222 HDNYMEYVTNCFMDHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILK-KSGNEKL 280
HD YM YV CF HSLF + LKEAF++FCNKTV G SS+E LAT+CDNILK + G+EKL
Sbjct: 351 HDKYMVYVDECFQKHSLFHKLLKEAFEVFCNKTVAGASSAEILATYCDNILKTRGGSEKL 410
Query: 281 SDEAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRSR--------TLARKNQTG 332
SDEA YISDKDLFAEFYRKK ARRLLFDRS TLAR+ QT
Sbjct: 411 SDEATEITLEKVVNLLVYISDKDLFAEFYRKKQARRLLFDRSGIMKEVTDITLARELQTN 470
Query: 333 FEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKT 392
F YL N GID +VTVL TGFWPSYK++DLN LP++M+ CVE FK FY TKT
Sbjct: 471 FVDYLSANMTTKLGIDFTVTVLTTGFWPSYKTTDLN----LPTEMVNCVEAFKVFYGTKT 526
Query: 393 KHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHD 452
R+LSWIYSLG CHI KFE K +EL++STY AA+L LFN + RLSY+++ QLNL+H+
Sbjct: 527 NSRRLSWIYSLGTCHILGKFEKKTMELVVSTYQAAVLLLFNNAERLSYTEISEQLNLSHE 586
Query: 453 DLVRLLHSLSILYYKILIKEPDTKSISRSDYFELNSKFTDRMRGSR 498
DLVRLLHSLS L YKILIKEP +++IS++D FE NSKFTD+MR R
Sbjct: 587 DLVRLLHSLSCLKYKILIKEPMSRTISKTDTFEFNSKFTDKMRKIR 632
Score = 366 (133.9 bits), Expect = 5.0e-142, Sum P(3) = 5.0e-142
Identities = 87/182 (47%), Positives = 112/182 (61%)
Query: 67 NIPGFDEFGLACFRDLVYDALKHKAKDAVIDEREREQVDRALLANVLDI----------- 115
N GF F ++++ +A K + ERE EQ+DR L+ NV+D+
Sbjct: 138 NDVGFTSFHDLVYQEIQSEA-KDVLLALIHKEREGEQIDRTLVKNVIDVYCGNGVGQMVI 196
Query: 116 ----FVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKL 171
F +LQDT+SYYSR ++ W +D CPDYM KAEECLK E++RV+ YL S E KL
Sbjct: 197 YEEDFESFLLQDTASYYSRKASRWSQEDSCPDYMLKAEECLKLEKERVTNYLHSTTEPKL 256
Query: 172 VEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG--P-HDNYMEY 228
VEKVQ+ELLVV A QL+E E SGC AL R +K+ DLSRMYR YR I G P D + ++
Sbjct: 257 VEKVQNELLVVVAKQLIENEHSGCLALLRDDKMGDLSRMYRLYRLIPQGLEPIADLFKQH 316
Query: 229 VT 230
VT
Sbjct: 317 VT 318
Score = 184 (69.8 bits), Expect = 5.0e-142, Sum P(3) = 5.0e-142
Identities = 36/51 (70%), Positives = 41/51 (80%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RKVL HQQLVSEC+E L +MFKP +K KKRIE LI++DYLER EN NTF
Sbjct: 667 RKVLAHQQLVSECVEHLSKMFKPDIKMIKKRIEDLINRDYLERDTENANTF 717
Score = 151 (58.2 bits), Expect = 2.2e-119, Sum P(3) = 2.2e-119
Identities = 33/116 (28%), Positives = 60/116 (51%)
Query: 1 MVQRRLIEFDEGWEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMCSQNTPNNNS 60
++ + LI +EGW ++ G+ KL+RILE L EPPF +Y+ L+ IY+MC Q PN+ S
Sbjct: 9 IMMKELILLEEGWSVMKTGVAKLQRILEDLSEPPFDPGQYINLYTIIYDMCLQQPPNDYS 68
Query: 61 ASCKRRNIPGFDEFGLACFRDLVYDALKHKAKDAVIDEREREQVDRALLANVLDIF 116
+ D + ++ V +++ + + ++ E + + +L L F
Sbjct: 69 QELYNKYRGVVDHYN----KETVLPSMRERHGEYMLRELVKRWANHKILVRWLSRF 120
Score = 142 (55.0 bits), Expect = 1.9e-118, Sum P(3) = 1.9e-118
Identities = 43/136 (31%), Positives = 69/136 (50%)
Query: 65 RRNIPGFDEFGLACFRDLVYDALKHKAKDAVI----DEREREQVDRALLANVLDIFVEHM 120
RR +P ++ G F DLVY ++ +AKD ++ ERE EQ+DR L+ NV+D++ +
Sbjct: 131 RRGLPTLNDVGFTSFHDLVYQEIQSEAKDVLLALIHKEREGEQIDRTLVKNVIDVYCGNG 190
Query: 121 LQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEE--KLV-EKVQH 177
+ Y + ++L+D Y RKA + D Y+ EE KL E+V +
Sbjct: 191 VGQMVIYEEDFES-FLLQDTASYYSRKASRW--SQEDSCPDYMLK-AEECLKLEKERVTN 246
Query: 178 ELLVVYATQLLEKEQS 193
L +L+EK Q+
Sbjct: 247 YLHSTTEPKLVEKVQN 262
>TAIR|locus:2024755 [details] [associations]
symbol:CUL2 "cullin 2" species:3702 "Arabidopsis
thaliana" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] InterPro:IPR001373
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009941
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 GO:GO:0019005
eggNOG:COG5647 SUPFAM:SSF75632 EMBL:AC009525 InterPro:IPR016159
SUPFAM:SSF74788 KO:K03347 HOGENOM:HOG000176712
ProtClustDB:CLSN2689296 EMBL:AK117909 EMBL:BT006231 IPI:IPI00541917
PIR:D86160 RefSeq:NP_171797.2 UniGene:At.42569 HSSP:Q9JLV5
ProteinModelPortal:Q9SRZ0 SMR:Q9SRZ0 STRING:Q9SRZ0 PaxDb:Q9SRZ0
PRIDE:Q9SRZ0 EnsemblPlants:AT1G02980.1 GeneID:839415
KEGG:ath:AT1G02980 TAIR:At1g02980 InParanoid:Q9SRZ0 OMA:NDYHERS
PhylomeDB:Q9SRZ0 Genevestigator:Q9SRZ0 Uniprot:Q9SRZ0
Length = 742
Score = 542 (195.9 bits), Expect = 1.5e-117, Sum P(4) = 1.5e-117
Identities = 107/197 (54%), Positives = 142/197 (72%)
Query: 302 KDLFAEFYRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPS 361
K+L + K+ +L D TLA+++QT F ++L NK G+D +VTVL TGFWPS
Sbjct: 464 KELLGAQFTSKM-EGMLTDM--TLAKEHQTNFVEFLSVNKTKKLGMDFTVTVLTTGFWPS 520
Query: 362 YKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELII 421
YK++DLN LP +M+ CVE FK +Y TKT R+LSWIYSLG C + KF+ K IE+++
Sbjct: 521 YKTTDLN----LPIEMVNCVEAFKAYYGTKTNSRRLSWIYSLGTCQLAGKFDKKTIEIVV 576
Query: 422 STYHAAILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSILYYKILIKEPDTKSISRS 481
+TY AA+L LFN + RLSY++++ QLNL H+DL RLLHSLS L YKILIKEP +++IS +
Sbjct: 577 TTYQAAVLLLFNNTERLSYTEILEQLNLGHEDLARLLHSLSCLKYKILIKEPMSRNISNT 636
Query: 482 DYFELNSKFTDRMRGSR 498
D FE NSKFTD+MR R
Sbjct: 637 DTFEFNSKFTDKMRRIR 653
Score = 339 (124.4 bits), Expect = 1.3e-105, Sum P(3) = 1.3e-105
Identities = 86/214 (40%), Positives = 125/214 (58%)
Query: 70 GFDEFGLACFRDLVYDALKHKAKDAVIDEREREQVDRALLANVLDIF--------VEH-- 119
GF F +++L A K + ERE EQ+DRALL NV+D++ V++
Sbjct: 133 GFISFRDLVYQELQSKA-KDAVLALIHKEREGEQIDRALLKNVIDVYCGNGMGELVKYEE 191
Query: 120 -----MLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEK 174
+L+D++SYYSR ++ W ++ CPDYM KAEE L+ E++RV+ YL S E KLV K
Sbjct: 192 DFESFLLEDSASYYSRNASRWNQENSCPDYMIKAEESLRLEKERVTNYLHSTTEPKLVAK 251
Query: 175 VQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAGPHDNYMEYVTNCFM 234
VQ+ELLVV A QL+E E SGC AL R +K+DDL+RMYR Y I G ++ V + F
Sbjct: 252 VQNELLVVVAKQLIENEHSGCRALLRDDKMDDLARMYRLYHPIPQG-----LDPVADLFK 306
Query: 235 DHSLFQRA--LKEAFKIFCNK--TVGGFSSSEQL 264
H + + +K+A + +K + G +Q+
Sbjct: 307 QHITVEGSALIKQATEAATDKAASTSGLKVQDQV 340
Score = 319 (117.4 bits), Expect = 1.5e-117, Sum P(4) = 1.5e-117
Identities = 63/102 (61%), Positives = 73/102 (71%)
Query: 222 HDNYMEYVTNCFMDHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSGN-EKL 280
HD +M YV CF HSLF +ALKEAF++FCNKTV G SS+E LAT+CDNILK G EKL
Sbjct: 349 HDKFMVYVDECFQKHSLFHKALKEAFEVFCNKTVAGVSSAEILATYCDNILKTGGGIEKL 408
Query: 281 SDEAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRS 322
+E + YISDKDLFAEF+RKK ARRLLFDR+
Sbjct: 409 ENEDLELTLEKVVKLLVYISDKDLFAEFFRKKQARRLLFDRN 450
Score = 198 (74.8 bits), Expect = 1.5e-117, Sum P(4) = 1.5e-117
Identities = 38/51 (74%), Positives = 43/51 (84%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RKVLGHQQLVSEC+E L +MFKP +K KKRIE LIS+DYLER +NPNTF
Sbjct: 688 RKVLGHQQLVSECVEHLSKMFKPDIKMIKKRIEDLISRDYLERDTDNPNTF 738
Score = 144 (55.7 bits), Expect = 1.5e-117, Sum P(4) = 1.5e-117
Identities = 35/89 (39%), Positives = 50/89 (56%)
Query: 64 KRRNIPGFDEFGLACFRDLVYDALKHKAKDAVI----DEREREQVDRALLANVLDIFVEH 119
+R + P G FRDLVY L+ KAKDAV+ ERE EQ+DRALL NV+D++ +
Sbjct: 122 RRGSHPTLSAVGFISFRDLVYQELQSKAKDAVLALIHKEREGEQIDRALLKNVIDVYCGN 181
Query: 120 MLQDTSSYYSRISTNWILKDPCPDYMRKA 148
+ + Y + ++L+D Y R A
Sbjct: 182 GMGELVKYEEDFES-FLLEDSASYYSRNA 209
Score = 131 (51.2 bits), Expect = 3.4e-116, Sum P(4) = 3.4e-116
Identities = 30/112 (26%), Positives = 59/112 (52%)
Query: 10 DEGWEYIQKGIGKLKRILEGLR-EPPFSSEEYMALHITIYNMCSQNTPNNNSASCKRRNI 68
+ GW ++ G+ KL++ILE + EPPF + M L+ T++N+C+Q PN+ S R
Sbjct: 9 EAGWSVMEAGVAKLQKILEEVPDEPPFDPVQRMQLYTTVHNLCTQKPPNDYSQQIYDRYG 68
Query: 69 PGFDEFGLACFRDLVYDALKHKAKDAVIDEREREQVDRALLANVLDIFVEHM 120
+ ++ + V A++ K + ++ E + ++ +L L F E++
Sbjct: 69 GVYVDYN----KQTVLPAIREKHGEYMLRELVKRWANQKILVRWLSHFFEYL 116
>RGD|1564494 [details] [associations]
symbol:Cul4b "cullin 4B" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031465 "Cul4B-RING ubiquitin ligase complex" evidence=ISO]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=ISO] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
RGD:1564494 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
IPI:IPI00362333 PRIDE:D3ZNZ7 Ensembl:ENSRNOT00000003523
UCSC:RGD:1564494 ArrayExpress:D3ZNZ7 Uniprot:D3ZNZ7
Length = 754
Score = 360 (131.8 bits), Expect = 6.0e-53, Sum P(4) = 6.0e-53
Identities = 86/274 (31%), Positives = 139/274 (50%)
Query: 223 DNYMEYVTNCFMDHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSGNEKLSD 282
D + CF+ + F A+KEAF+ F NK +E +A + D+ L+ +GN++ +D
Sbjct: 393 DKVDHIIDTCFLKNEKFINAMKEAFETFINKRPN--KPAELIAKYVDSKLR-AGNKEATD 449
Query: 283 EAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRSRTL-ARKNQTGFEKY-LRYN 340
E + +I KD+F FY+K LA+RLL +S ++ A K+ K+ N
Sbjct: 450 EELEKMLDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHEYMQN 509
Query: 341 KNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWI 400
+N I+L+V +L G+WP+Y +++ LP +M+K E+FK FY K RKL W
Sbjct: 510 QNVPGNIELTVNILTMGYWPTYVPMEVH----LPPEMVKLQEIFKTFYLGKHSGRKLQWQ 565
Query: 401 YSLGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLVRLLHS 460
+LG C + A+F+ EL +S + +L +FN S ++ + +L R L S
Sbjct: 566 STLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQS 625
Query: 461 LSILYYKILIKEPDTKSISRSDYFELNSKFTDRM 494
L+ ++L K P K I D F N F ++
Sbjct: 626 LACGKARVLAKNPKGKDIEDGDKFICNDDFKHKL 659
Score = 175 (66.7 bits), Expect = 6.0e-53, Sum P(4) = 6.0e-53
Identities = 50/181 (27%), Positives = 93/181 (51%)
Query: 68 IPGFDEFGLACFR-DLVYDA-LKHKAKDAVI--DERER--EQVDRALLANVL-------- 113
+P + GL FR ++ D ++ K D ++ ERER E +DR+LL ++L
Sbjct: 190 LPSIWDMGLELFRAHIISDQKVQTKTIDGILLLIERERNGEAIDRSLLRSLLNMLSDLQI 249
Query: 114 --DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKL 171
D F + LQ+T+ Y+ + + P+Y+ + L++E DR+ YL ++ L
Sbjct: 250 YQDSFEQRFLQETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTTQKSL 309
Query: 172 VEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAGPH---DNYMEY 228
+ V+ +LL + T +L+K G +L N++ DLS +Y+ + +R G +++EY
Sbjct: 310 IASVEKQLLGEHLTAILQK---GLNSLLDENRIQDLSLLYQLFSRVRGGVQVLLQHWIEY 366
Query: 229 V 229
+
Sbjct: 367 I 367
Score = 112 (44.5 bits), Expect = 6.0e-53, Sum P(4) = 6.0e-53
Identities = 27/51 (52%), Positives = 30/51 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK L H LVSE L KPA KKRIE LI +DY+ER ENPN +
Sbjct: 702 RKTLSHNLLVSEVYNQLKFPVKPA--DLKKRIESLIDRDYMERDKENPNQY 750
Score = 37 (18.1 bits), Expect = 6.0e-53, Sum P(4) = 6.0e-53
Identities = 12/49 (24%), Positives = 19/49 (38%)
Query: 10 DEGWEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMCSQNTPNN 58
DE W+ KLK +E ++ L+ + N+CS N
Sbjct: 83 DETWQ-------KLKEAVEAIQNSTSIKYNLEELYQAVENLCSYKISAN 124
>DICTYBASE|DDB_G0284903 [details] [associations]
symbol:culC "cullin C" species:44689 "Dictyostelium
discoideum" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
dictyBase:DDB_G0284903 GO:GO:0005634 GenomeReviews:CM000153_GR
EMBL:AAFI02000073 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 HSSP:Q9JLV5
KO:K03869 RefSeq:XP_639922.1 ProteinModelPortal:Q54NZ5 SMR:Q54NZ5
STRING:Q54NZ5 EnsemblProtists:DDB0266742 GeneID:8624834
KEGG:ddi:DDB_G0284903 OMA:YRTESEN Uniprot:Q54NZ5
Length = 769
Score = 232 (86.7 bits), Expect = 2.0e-47, Sum P(4) = 2.0e-47
Identities = 61/178 (34%), Positives = 94/178 (52%)
Query: 325 LARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVF 384
L++ +GF+ Y++ K A IDL+V VL TGFWP+ +++ N LP +++ C E F
Sbjct: 474 LSQDTMSGFKTYIQNLKKA-LPIDLNVHVLTTGFWPTQNTANCN----LPREILLCCEAF 528
Query: 385 KRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVI 444
K +Y + R L W ++G I A F K+ EL +S+Y IL LFN ++L++ ++
Sbjct: 529 KSYYLSNHNGRLLLWQTNMGTAEIKANFPSKSHELQVSSYQMVILLLFNDQSKLTFKEIA 588
Query: 445 TQLNLTHDDLVRLLHSLSILYYKILIKE-PDTKSISRSDYFELNSKFTDRMRGSRSLS 501
Q + DL R L +L+ KIL +E P T S + + S T S S S
Sbjct: 589 DQTGIPTIDLKRNLLALTNPKNKILDRELPSTTSSTTTTTTTATSSSTSTSPSSSSSS 646
Score = 216 (81.1 bits), Expect = 2.0e-47, Sum P(4) = 2.0e-47
Identities = 55/167 (32%), Positives = 89/167 (53%)
Query: 83 VYDALKHKAKDAVIDEREREQVDRALLANVL-----------DIFVEH----MLQDTSSY 127
+ D L + V ERE E +DR L+ N++ ++++E +L TSS+
Sbjct: 152 IKDRLLNTLLSMVQKEREGEVIDRILIKNIVQMLIDLGVNSKNVYIEDFEKPLLLKTSSH 211
Query: 128 YSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVYATQL 187
Y S I CPDYM+K E CLK+E +RVS YL S+ E KL E + +L+ + L
Sbjct: 212 YQAQSQTLIQTCSCPDYMKKVEICLKEELERVSHYLDSSSEPKLKEVCEKQLISNHMRTL 271
Query: 188 LEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAGPHDNYMEYVTNCFM 234
++ E SG ++ + +K++DL RMY + + G N M+ V + ++
Sbjct: 272 IDMENSGLISMLKDDKIEDLKRMYNLFSRVSDGL--NLMKDVISSYV 316
Score = 117 (46.2 bits), Expect = 2.0e-47, Sum P(4) = 2.0e-47
Identities = 30/100 (30%), Positives = 50/100 (50%)
Query: 223 DNYMEYVTNCFMDHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSGNEKLSD 282
D Y + N + F ++++AF+ F N S E ++ F D LKK G + +S+
Sbjct: 345 DKYDNLLQNALYNDKQFIHSIQQAFEYFINLNP---KSPEYISLFIDEKLKK-GLKGVSE 400
Query: 283 EAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRS 322
E + I +KD+F ++Y++ LA+RLL RS
Sbjct: 401 EEVDIILDKILMLFRLIQEKDVFEKYYKQHLAKRLLLGRS 440
Score = 98 (39.6 bits), Expect = 2.0e-47, Sum P(4) = 2.0e-47
Identities = 23/43 (53%), Positives = 26/43 (60%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLER 546
RK L H LVSE I+ L F P KKRIE LI ++YLER
Sbjct: 715 RKTLEHSNLVSEVIKQLQSRFVPNPVIVKKRIESLIEREYLER 757
Score = 72 (30.4 bits), Expect = 1.5e-32, Sum P(4) = 1.5e-32
Identities = 21/81 (25%), Positives = 36/81 (44%)
Query: 64 KRRNIPGFDEFGLACFRD------LVYDALKHKAKDAVIDEREREQVDRALLANVLDIFV 117
K+ N+ + GL FRD + D L + V ERE E +DR L+ N++ + +
Sbjct: 127 KQNNLSSVFDLGLYLFRDNVAHCSTIKDRLLNTLLSMVQKEREGEVIDRILIKNIVQMLI 186
Query: 118 EHMLQDTSSYYSRISTNWILK 138
+ + + Y +LK
Sbjct: 187 DLGVNSKNVYIEDFEKPLLLK 207
Score = 49 (22.3 bits), Expect = 2.5e-28, Sum P(4) = 2.5e-28
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 475 TKSISRSDYFELNSKFTDRM 494
+KSI SD F N+KF ++
Sbjct: 653 SKSIDESDVFAFNTKFKSKL 672
Score = 40 (19.1 bits), Expect = 2.8e-29, Sum P(4) = 2.8e-29
Identities = 10/41 (24%), Positives = 21/41 (51%)
Query: 75 GLACFRDLVYDALKHKAKDAVIDEREREQVDRALLANVLDI 115
GL +D++ +K + V+DE E+ + ++LD+
Sbjct: 304 GLNLMKDVISSYVKEIGRGIVMDE-EKTKESGTYFQSLLDL 343
>MGI|MGI:1919834 [details] [associations]
symbol:Cul4b "cullin 4B" species:10090 "Mus musculus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031465 "Cul4B-RING ubiquitin ligase complex" evidence=ISO]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IMP] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 MGI:MGI:1919834
GO:GO:0005634 GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0007049 GO:GO:0006511 GO:GO:0045732
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0045750 EMBL:CH466570
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
KO:K10609 HOVERGEN:HBG003619 OrthoDB:EOG42FSH0 CTD:8450
GO:GO:0031465 EMBL:AY330868 EMBL:AK012410 EMBL:AK032701
EMBL:AK160998 EMBL:AL513356 EMBL:BC004026 EMBL:BC010347
EMBL:AB093259 IPI:IPI00224689 IPI:IPI00473987 RefSeq:NP_001103612.1
RefSeq:NP_082564.3 UniGene:Mm.327675 ProteinModelPortal:A2A432
SMR:A2A432 IntAct:A2A432 STRING:A2A432 PhosphoSite:A2A432
PaxDb:A2A432 PRIDE:A2A432 Ensembl:ENSMUST00000050083
Ensembl:ENSMUST00000115118 GeneID:72584 KEGG:mmu:72584
UCSC:uc009taa.2 InParanoid:Q91YZ7 ChiTaRS:CUL4B NextBio:336543
Bgee:A2A432 Genevestigator:A2A432 Uniprot:A2A432
Length = 970
Score = 237 (88.5 bits), Expect = 4.2e-47, Sum P(5) = 4.2e-47
Identities = 52/162 (32%), Positives = 85/162 (52%)
Query: 333 FEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKT 392
F++Y++ N+N I+L+V +L G+WP+Y +++ LP +M+K E+FK FY K
Sbjct: 719 FKQYMQ-NQNVPGNIELTVNILTMGYWPTYVPMEVH----LPPEMVKLQEIFKTFYLGKH 773
Query: 393 KHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHD 452
RKL W +LG C + A+F+ EL +S + +L +FN S ++ +
Sbjct: 774 SGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTMVLLMFNEGEEFSLEEIKHATGIEDG 833
Query: 453 DLVRLLHSLSILYYKILIKEPDTKSISRSDYFELNSKFTDRM 494
+L R L SL+ ++L K P K I D F N F ++
Sbjct: 834 ELRRTLQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKL 875
Score = 174 (66.3 bits), Expect = 4.2e-47, Sum P(5) = 4.2e-47
Identities = 50/181 (27%), Positives = 92/181 (50%)
Query: 68 IPGFDEFGLACFR-DLVYDA-LKHKAKDAVI--DERER--EQVDRALLANVL-------- 113
+P + GL FR ++ D ++ K D ++ ERER E +DR+LL ++L
Sbjct: 378 LPSIWDMGLELFRAHIISDQKVQTKTIDGILLLIERERNGEAIDRSLLRSLLSMLSDLQI 437
Query: 114 --DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKL 171
D F + LQ+T+ Y+ + + P+Y+ + L++E DR+ YL ++ L
Sbjct: 438 YQDSFEQQFLQETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTTQKSL 497
Query: 172 VEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAGPH---DNYMEY 228
+ V+ +LL + T +L+K G +L N++ DLS +Y+ + +R G ++EY
Sbjct: 498 IASVEKQLLGEHLTAILQK---GLNSLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIEY 554
Query: 229 V 229
+
Sbjct: 555 I 555
Score = 143 (55.4 bits), Expect = 4.2e-47, Sum P(5) = 4.2e-47
Identities = 35/108 (32%), Positives = 58/108 (53%)
Query: 223 DNYMEYVTNCFMDHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSGNEKLSD 282
D + CF+ + F A+KEAF+ F NK +E +A + D+ L+ +GN++ +D
Sbjct: 581 DKVDHIIDTCFLKNEKFINAMKEAFETFINKRPN--KPAELIAKYVDSKLR-AGNKEATD 637
Query: 283 EAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRSRTL-ARKN 329
E + +I KD+F FY+K LA+RLL +S ++ A K+
Sbjct: 638 EELEKMLDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKS 685
Score = 112 (44.5 bits), Expect = 4.2e-47, Sum P(5) = 4.2e-47
Identities = 27/51 (52%), Positives = 30/51 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK L H LVSE L KPA KKRIE LI +DY+ER ENPN +
Sbjct: 918 RKTLSHNLLVSEVYNQLKFPVKPA--DLKKRIESLIDRDYMERDKENPNQY 966
Score = 38 (18.4 bits), Expect = 4.2e-47, Sum P(5) = 4.2e-47
Identities = 12/49 (24%), Positives = 19/49 (38%)
Query: 10 DEGWEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMCSQNTPNN 58
DE W+ KLK +E ++ L+ + N+CS N
Sbjct: 271 DETWQ-------KLKEAVEAIQNSTSIKYNLEELYQAVENLCSHKISAN 312
>TAIR|locus:2025881 [details] [associations]
symbol:AT1G59790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC007258 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03347
HOGENOM:HOG000176712 IPI:IPI00517906 PIR:H96621 RefSeq:NP_176188.1
UniGene:At.52273 ProteinModelPortal:Q9XIE9 SMR:Q9XIE9 PRIDE:Q9XIE9
EnsemblPlants:AT1G59790.1 GeneID:842272 KEGG:ath:AT1G59790
TAIR:At1g59790 OMA:QNELLVM ProtClustDB:CLSN2679703
Genevestigator:Q9XIE9 Uniprot:Q9XIE9
Length = 374
Score = 336 (123.3 bits), Expect = 8.0e-47, Sum P(3) = 8.0e-47
Identities = 78/151 (51%), Positives = 98/151 (64%)
Query: 98 EREREQVDRALLANVLDIFVEH---------------MLQDTSSYYSRISTNWILKDPCP 142
ERE EQ+DRAL+ NVLDI+VE+ MLQDT+SYYSR ++ W +D CP
Sbjct: 165 EREGEQIDRALVKNVLDIYVENGMGTLEKYEEDFESFMLQDTASYYSRKASRWTEEDSCP 224
Query: 143 DYMRKAEECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVYATQLLEKEQSGCGALFRGN 202
DYM K EECLK ER+RV+ YL S E KLVEK+Q+ELLV+ LE E SG AL R +
Sbjct: 225 DYMIKVEECLKMERERVTHYLHSITEPKLVEKIQNELLVMVTKNRLENEHSGFSALLRDD 284
Query: 203 KVDDLSRMYRFYRTI--RAGP-HDNYMEYVT 230
K +DLSR+YR Y I R G D + +++T
Sbjct: 285 KKNDLSRIYRLYLPIPKRLGRVADLFKKHIT 315
Score = 186 (70.5 bits), Expect = 1.4e-23, Sum P(3) = 1.4e-23
Identities = 55/146 (37%), Positives = 78/146 (53%)
Query: 68 IPGFDEFGLACFRDLVYDALKHKAKDAVI----DEREREQVDRALLANVLDIFVEHMLQD 123
IP DE GL CF DLVY ++ AK+ VI ERE EQ+DRAL+ NVLDI+VE+ +
Sbjct: 131 IPSLDEVGLTCFLDLVYCEMQSTAKEVVIALIHKEREGEQIDRALVKNVLDIYVENGM-G 189
Query: 124 TSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLV---EKVQHELL 180
T Y +++L+D Y RKA E D Y+ EE L E+V H L
Sbjct: 190 TLEKYEEDFESFMLQDTASYYSRKASRWT--EEDSCPDYM-IKVEECLKMERERVTHYLH 246
Query: 181 VVYATQLLEKEQSGCGALFRGNKVDD 206
+ +L+EK Q+ + N++++
Sbjct: 247 SITEPKLVEKIQNELLVMVTKNRLEN 272
Score = 136 (52.9 bits), Expect = 8.0e-47, Sum P(3) = 8.0e-47
Identities = 31/68 (45%), Positives = 39/68 (57%)
Query: 1 MVQRRLIEFDEGWEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMCSQNTPNNNS 60
M + R I+F+EGW IQKGI KL RILEG EP F E L+ IY+MC Q + +
Sbjct: 6 MSRPRQIKFEEGWSNIQKGITKLIRILEGEPEPTFYFSECFKLYTIIYDMCVQRSDYSQQ 65
Query: 61 ASCKRRNI 68
K R +
Sbjct: 66 LYEKYRKV 73
Score = 58 (25.5 bits), Expect = 8.0e-47, Sum P(3) = 8.0e-47
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 222 HDNYMEYVTNCFMDHSLFQR 241
H+ ++ YV CF +H+LF +
Sbjct: 338 HNKFIVYVIECFQNHTLFHK 357
>UNIPROTKB|K4DI93 [details] [associations]
symbol:CUL4B "Cullin 4B, isoform CRA_e" species:9606 "Homo
sapiens" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 EMBL:CH471107
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
EMBL:AC002476 EMBL:AL451005 HGNC:HGNC:2555 Ensembl:ENST00000336592
Uniprot:K4DI93
Length = 900
Score = 238 (88.8 bits), Expect = 1.2e-46, Sum P(5) = 1.2e-46
Identities = 52/162 (32%), Positives = 85/162 (52%)
Query: 333 FEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKT 392
F++Y++ N+N I+L+V +L G+WP+Y +++ LP +M+K E+FK FY K
Sbjct: 649 FKQYMQ-NQNVPGNIELTVNILTMGYWPTYVPMEVH----LPPEMVKLQEIFKTFYLGKH 703
Query: 393 KHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHD 452
RKL W +LG C + A+F+ EL +S + +L +FN S ++ +
Sbjct: 704 SGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDG 763
Query: 453 DLVRLLHSLSILYYKILIKEPDTKSISRSDYFELNSKFTDRM 494
+L R L SL+ ++L K P K I D F N F ++
Sbjct: 764 ELRRTLQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKL 805
Score = 170 (64.9 bits), Expect = 1.2e-46, Sum P(5) = 1.2e-46
Identities = 49/181 (27%), Positives = 92/181 (50%)
Query: 68 IPGFDEFGLACFR-DLVYDA-LKHKAKDAVI--DERER--EQVDRALLANVL-------- 113
+P + GL FR ++ D +++K D ++ ERER E +DR+LL ++L
Sbjct: 308 LPSIWDMGLELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSLLSMLSDLQI 367
Query: 114 --DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKL 171
D F + L++T+ Y+ + + P+Y+ + L++E DR+ YL ++ L
Sbjct: 368 YQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTTQKSL 427
Query: 172 VEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAGPH---DNYMEY 228
+ V+ +LL + T +L+K G L N++ DLS +Y+ + +R G ++EY
Sbjct: 428 IATVEKQLLGEHLTAILQK---GLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIEY 484
Query: 229 V 229
+
Sbjct: 485 I 485
Score = 140 (54.3 bits), Expect = 1.2e-46, Sum P(5) = 1.2e-46
Identities = 34/99 (34%), Positives = 56/99 (56%)
Query: 232 CFMDHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSGNEKLSDEAIXXXXXX 291
CF+ + F A+KEAF+ F NK +E +A + D+ L+ +GN++ +DE +
Sbjct: 520 CFLKNEKFINAMKEAFETFINKRPN--KPAELIAKYVDSKLR-AGNKEATDEELEKMLDK 576
Query: 292 XXXXXXYISDKDLFAEFYRKKLARRLLFDRSRTL-ARKN 329
+I KD+F FY+K LA+RLL +S ++ A K+
Sbjct: 577 IMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKS 615
Score = 112 (44.5 bits), Expect = 1.2e-46, Sum P(5) = 1.2e-46
Identities = 27/51 (52%), Positives = 30/51 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK L H LVSE L KPA KKRIE LI +DY+ER ENPN +
Sbjct: 848 RKTLSHNLLVSEVYNQLKFPVKPA--DLKKRIESLIDRDYMERDKENPNQY 896
Score = 37 (18.1 bits), Expect = 1.2e-46, Sum P(5) = 1.2e-46
Identities = 12/49 (24%), Positives = 19/49 (38%)
Query: 10 DEGWEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMCSQNTPNN 58
DE W+ KLK +E ++ L+ + N+CS N
Sbjct: 201 DETWQ-------KLKEAVEAIQNSTSIKYNLEELYQAVENLCSYKISAN 242
>UNIPROTKB|Q13620 [details] [associations]
symbol:CUL4B "Cullin-4B" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IEA]
[GO:0045750 "positive regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007049
"cell cycle" evidence=NAS] [GO:0031465 "Cul4B-RING ubiquitin ligase
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005634 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0007049
GO:GO:0006511 EMBL:CH471107 GO:GO:0045732 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159 SUPFAM:SSF74788
PDB:4A0C PDBsum:4A0C KO:K10609 HOVERGEN:HBG003619 OrthoDB:EOG42FSH0
EMBL:AY365125 EMBL:AF212995 EMBL:AK123688 EMBL:AK299081
EMBL:AK315037 EMBL:BX537787 EMBL:AC002476 EMBL:AL451005
EMBL:BC036216 EMBL:AB014595 EMBL:U58091 IPI:IPI00179057
IPI:IPI00480142 IPI:IPI00965290 RefSeq:NP_001073341.1
RefSeq:NP_003579.3 UniGene:Hs.102914 PDB:2DO7 PDB:4A0L PDB:4A64
PDBsum:2DO7 PDBsum:4A0L PDBsum:4A64 ProteinModelPortal:Q13620
SMR:Q13620 DIP:DIP-31609N IntAct:Q13620 STRING:Q13620
PhosphoSite:Q13620 DMDM:296439468 PaxDb:Q13620 PRIDE:Q13620
DNASU:8450 Ensembl:ENST00000371322 Ensembl:ENST00000404115
GeneID:8450 KEGG:hsa:8450 UCSC:uc004esv.3 UCSC:uc004esw.3 CTD:8450
GeneCards:GC0XM119658 H-InvDB:HIX0017025 HGNC:HGNC:2555
HPA:CAB017786 HPA:HPA011880 MIM:300304 MIM:300354
neXtProt:NX_Q13620 Orphanet:85293 PharmGKB:PA27051 OMA:FEDSLDF
EvolutionaryTrace:Q13620 GenomeRNAi:8450 NextBio:31618
PMAP-CutDB:Q13620 ArrayExpress:Q13620 Bgee:Q13620 CleanEx:HS_CUL4B
Genevestigator:Q13620 GermOnline:ENSG00000158290 GO:GO:0031465
Uniprot:Q13620
Length = 913
Score = 238 (88.8 bits), Expect = 1.4e-46, Sum P(5) = 1.4e-46
Identities = 52/162 (32%), Positives = 85/162 (52%)
Query: 333 FEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKT 392
F++Y++ N+N I+L+V +L G+WP+Y +++ LP +M+K E+FK FY K
Sbjct: 662 FKQYMQ-NQNVPGNIELTVNILTMGYWPTYVPMEVH----LPPEMVKLQEIFKTFYLGKH 716
Query: 393 KHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHD 452
RKL W +LG C + A+F+ EL +S + +L +FN S ++ +
Sbjct: 717 SGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDG 776
Query: 453 DLVRLLHSLSILYYKILIKEPDTKSISRSDYFELNSKFTDRM 494
+L R L SL+ ++L K P K I D F N F ++
Sbjct: 777 ELRRTLQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKL 818
Score = 170 (64.9 bits), Expect = 1.4e-46, Sum P(5) = 1.4e-46
Identities = 49/181 (27%), Positives = 92/181 (50%)
Query: 68 IPGFDEFGLACFR-DLVYDA-LKHKAKDAVI--DERER--EQVDRALLANVL-------- 113
+P + GL FR ++ D +++K D ++ ERER E +DR+LL ++L
Sbjct: 321 LPSIWDMGLELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSLLSMLSDLQI 380
Query: 114 --DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKL 171
D F + L++T+ Y+ + + P+Y+ + L++E DR+ YL ++ L
Sbjct: 381 YQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTTQKSL 440
Query: 172 VEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAGPH---DNYMEY 228
+ V+ +LL + T +L+K G L N++ DLS +Y+ + +R G ++EY
Sbjct: 441 IATVEKQLLGEHLTAILQK---GLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIEY 497
Query: 229 V 229
+
Sbjct: 498 I 498
Score = 140 (54.3 bits), Expect = 1.4e-46, Sum P(5) = 1.4e-46
Identities = 34/99 (34%), Positives = 56/99 (56%)
Query: 232 CFMDHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSGNEKLSDEAIXXXXXX 291
CF+ + F A+KEAF+ F NK +E +A + D+ L+ +GN++ +DE +
Sbjct: 533 CFLKNEKFINAMKEAFETFINKRPN--KPAELIAKYVDSKLR-AGNKEATDEELEKMLDK 589
Query: 292 XXXXXXYISDKDLFAEFYRKKLARRLLFDRSRTL-ARKN 329
+I KD+F FY+K LA+RLL +S ++ A K+
Sbjct: 590 IMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKS 628
Score = 112 (44.5 bits), Expect = 1.4e-46, Sum P(5) = 1.4e-46
Identities = 27/51 (52%), Positives = 30/51 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK L H LVSE L KPA KKRIE LI +DY+ER ENPN +
Sbjct: 861 RKTLSHNLLVSEVYNQLKFPVKPA--DLKKRIESLIDRDYMERDKENPNQY 909
Score = 37 (18.1 bits), Expect = 1.4e-46, Sum P(5) = 1.4e-46
Identities = 12/49 (24%), Positives = 19/49 (38%)
Query: 10 DEGWEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMCSQNTPNN 58
DE W+ KLK +E ++ L+ + N+CS N
Sbjct: 214 DETWQ-------KLKEAVEAIQNSTSIKYNLEELYQAVENLCSYKISAN 255
>UNIPROTKB|E1BQK9 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0031465 "Cul4B-RING ubiquitin
ligase complex" evidence=IEA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IEA] [GO:0045750 "positive
regulation of S phase of mitotic cell cycle" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 GO:GO:0045732 SUPFAM:SSF75632
GO:GO:0045750 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:FEDSLDF GO:GO:0031465
EMBL:AADN02013619 IPI:IPI00584907 Ensembl:ENSGALT00000013942
Uniprot:E1BQK9
Length = 884
Score = 234 (87.4 bits), Expect = 2.0e-46, Sum P(5) = 2.0e-46
Identities = 50/161 (31%), Positives = 84/161 (52%)
Query: 334 EKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTK 393
++Y++ N+N I+L+V +L G+WP+Y +++ LP +M+K E+FK FY K
Sbjct: 634 QQYMQ-NQNVPGNIELTVNILTMGYWPTYVPMEVH----LPPEMVKLQEIFKTFYLGKHS 688
Query: 394 HRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHDD 453
RKL W +LG C + A+F+ EL +S + +L +FN S ++ + +
Sbjct: 689 GRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGE 748
Query: 454 LVRLLHSLSILYYKILIKEPDTKSISRSDYFELNSKFTDRM 494
L R L SL+ ++L K P K + D F N F ++
Sbjct: 749 LRRTLQSLACGKARVLTKSPKGKDVEDGDKFTCNDDFRHKL 789
Score = 171 (65.3 bits), Expect = 2.0e-46, Sum P(5) = 2.0e-46
Identities = 49/181 (27%), Positives = 93/181 (51%)
Query: 68 IPGFDEFGLACFRD-LVYDA-LKHKAKDAVI--DERER--EQVDRALLANVL-------- 113
+P + GL FR ++ D +++K D ++ ERER E +DR+LL ++L
Sbjct: 291 LPSIWDMGLELFRTHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSLLSMLSDLQI 350
Query: 114 --DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKL 171
D F L++T+ Y+ + + P+Y+ + L++E DR+ YL + ++ L
Sbjct: 351 YQDSFEHRFLEETNRLYAAEGQRLMQEREVPEYLHHVNKRLEEEADRIITYLDQSTQKPL 410
Query: 172 VEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAGPH---DNYMEY 228
+ V+ +LL + T +L+K G L N++ DLS +Y+ + +R G +++EY
Sbjct: 411 IATVEKQLLGEHLTAILQK---GLNHLLDENRIQDLSLLYQLFSRVRGGVQVLLQHWIEY 467
Query: 229 V 229
+
Sbjct: 468 I 468
Score = 141 (54.7 bits), Expect = 2.0e-46, Sum P(5) = 2.0e-46
Identities = 34/99 (34%), Positives = 56/99 (56%)
Query: 232 CFMDHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSGNEKLSDEAIXXXXXX 291
CF+ + F A+KEAF+ F NK +E +A + D+ L+ +GN++ +DE +
Sbjct: 503 CFLKNEKFVNAMKEAFETFINKRPN--KPAELIAKYVDSKLR-AGNKEATDEELEKMLDK 559
Query: 292 XXXXXXYISDKDLFAEFYRKKLARRLLFDRSRTL-ARKN 329
+I KD+F FY+K LA+RLL +S ++ A K+
Sbjct: 560 IMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKS 598
Score = 112 (44.5 bits), Expect = 2.0e-46, Sum P(5) = 2.0e-46
Identities = 27/51 (52%), Positives = 30/51 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK L H LVSE L KPA KKRIE LI +DY+ER ENPN +
Sbjct: 832 RKTLSHNLLVSEVYNQLKFPVKPA--DLKKRIESLIDRDYMERDKENPNQY 880
Score = 37 (18.1 bits), Expect = 2.0e-46, Sum P(5) = 2.0e-46
Identities = 12/49 (24%), Positives = 19/49 (38%)
Query: 10 DEGWEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMCSQNTPNN 58
DE W+ KLK +E ++ L+ + N+CS N
Sbjct: 184 DETWQ-------KLKEAVEAIQNSTSIKYNLEELYQAVENLCSYKISAN 225
>UNIPROTKB|E1BFD5 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045750 "positive regulation of S phase of mitotic cell
cycle" evidence=IEA] [GO:0045732 "positive regulation of protein
catabolic process" evidence=IEA] [GO:0031465 "Cul4B-RING ubiquitin
ligase complex" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 GO:GO:0045732 SUPFAM:SSF75632
GO:GO:0045750 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:FEDSLDF GO:GO:0031465
EMBL:DAAA02067221 EMBL:DAAA02067222 IPI:IPI00707913
Ensembl:ENSBTAT00000024713 Uniprot:E1BFD5
Length = 965
Score = 238 (88.8 bits), Expect = 2.1e-46, Sum P(5) = 2.1e-46
Identities = 52/162 (32%), Positives = 85/162 (52%)
Query: 333 FEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKT 392
F++Y++ N+N I+L+V +L G+WP+Y +++ LP +M+K E+FK FY K
Sbjct: 714 FKQYMQ-NQNVPGNIELTVNILTMGYWPTYVPMEVH----LPPEMVKLQEIFKTFYLGKH 768
Query: 393 KHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHD 452
RKL W +LG C + A+F+ EL +S + +L +FN S ++ +
Sbjct: 769 SGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDG 828
Query: 453 DLVRLLHSLSILYYKILIKEPDTKSISRSDYFELNSKFTDRM 494
+L R L SL+ ++L K P K I D F N F ++
Sbjct: 829 ELRRTLQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKL 870
Score = 170 (64.9 bits), Expect = 2.1e-46, Sum P(5) = 2.1e-46
Identities = 49/181 (27%), Positives = 92/181 (50%)
Query: 68 IPGFDEFGLACFR-DLVYDA-LKHKAKDAVI--DERER--EQVDRALLANVL-------- 113
+P + GL FR ++ D +++K D ++ ERER E +DR+LL ++L
Sbjct: 373 LPSIWDMGLELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSLLSMLSDLQI 432
Query: 114 --DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKL 171
D F + L++T+ Y+ + + P+Y+ + L++E DR+ YL ++ L
Sbjct: 433 YQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTTQKSL 492
Query: 172 VEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAGPH---DNYMEY 228
+ V+ +LL + T +L+K G L N++ DLS +Y+ + +R G ++EY
Sbjct: 493 IATVEKQLLGEHLTAILQK---GLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIEY 549
Query: 229 V 229
+
Sbjct: 550 I 550
Score = 140 (54.3 bits), Expect = 2.1e-46, Sum P(5) = 2.1e-46
Identities = 34/99 (34%), Positives = 56/99 (56%)
Query: 232 CFMDHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSGNEKLSDEAIXXXXXX 291
CF+ + F A+KEAF+ F NK +E +A + D+ L+ +GN++ +DE +
Sbjct: 585 CFLKNEKFINAMKEAFETFINKRPN--KPAELIAKYVDSKLR-AGNKEATDEELEKMLDK 641
Query: 292 XXXXXXYISDKDLFAEFYRKKLARRLLFDRSRTL-ARKN 329
+I KD+F FY+K LA+RLL +S ++ A K+
Sbjct: 642 IMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKS 680
Score = 112 (44.5 bits), Expect = 2.1e-46, Sum P(5) = 2.1e-46
Identities = 27/51 (52%), Positives = 30/51 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK L H LVSE L KPA KKRIE LI +DY+ER ENPN +
Sbjct: 913 RKTLSHNLLVSEVYNQLKFPVKPA--DLKKRIESLIDRDYMERDKENPNQY 961
Score = 37 (18.1 bits), Expect = 2.1e-46, Sum P(5) = 2.1e-46
Identities = 12/49 (24%), Positives = 19/49 (38%)
Query: 10 DEGWEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMCSQNTPNN 58
DE W+ KLK +E ++ L+ + N+CS N
Sbjct: 266 DETWQ-------KLKEAVEAIQNSTSIKYNLEELYQAVENLCSYKISAN 307
>UNIPROTKB|E2RMN1 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:FEDSLDF EMBL:AAEX03026836
Ensembl:ENSCAFT00000029435 Uniprot:E2RMN1
Length = 982
Score = 238 (88.8 bits), Expect = 2.3e-46, Sum P(5) = 2.3e-46
Identities = 52/162 (32%), Positives = 85/162 (52%)
Query: 333 FEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKT 392
F++Y++ N+N I+L+V +L G+WP+Y +++ LP +M+K E+FK FY K
Sbjct: 731 FKQYMQ-NQNVPGNIELTVNILTMGYWPTYVPMEVH----LPPEMVKLQEIFKTFYLGKH 785
Query: 393 KHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHD 452
RKL W +LG C + A+F+ EL +S + +L +FN S ++ +
Sbjct: 786 SGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDG 845
Query: 453 DLVRLLHSLSILYYKILIKEPDTKSISRSDYFELNSKFTDRM 494
+L R L SL+ ++L K P K I D F N F ++
Sbjct: 846 ELRRTLQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKL 887
Score = 170 (64.9 bits), Expect = 2.3e-46, Sum P(5) = 2.3e-46
Identities = 49/181 (27%), Positives = 92/181 (50%)
Query: 68 IPGFDEFGLACFR-DLVYDA-LKHKAKDAVI--DERER--EQVDRALLANVL-------- 113
+P + GL FR ++ D +++K D ++ ERER E +DR+LL ++L
Sbjct: 390 LPSIWDMGLELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSLLSMLSDLQI 449
Query: 114 --DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKL 171
D F + L++T+ Y+ + + P+Y+ + L++E DR+ YL ++ L
Sbjct: 450 YQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTTQKSL 509
Query: 172 VEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAGPH---DNYMEY 228
+ V+ +LL + T +L+K G L N++ DLS +Y+ + +R G ++EY
Sbjct: 510 IATVEKQLLGEHLTAILQK---GLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIEY 566
Query: 229 V 229
+
Sbjct: 567 I 567
Score = 140 (54.3 bits), Expect = 2.3e-46, Sum P(5) = 2.3e-46
Identities = 34/99 (34%), Positives = 56/99 (56%)
Query: 232 CFMDHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSGNEKLSDEAIXXXXXX 291
CF+ + F A+KEAF+ F NK +E +A + D+ L+ +GN++ +DE +
Sbjct: 602 CFLKNEKFINAMKEAFETFINKRPN--KPAELIAKYVDSKLR-AGNKEATDEELEKMLDK 658
Query: 292 XXXXXXYISDKDLFAEFYRKKLARRLLFDRSRTL-ARKN 329
+I KD+F FY+K LA+RLL +S ++ A K+
Sbjct: 659 IMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKS 697
Score = 112 (44.5 bits), Expect = 2.3e-46, Sum P(5) = 2.3e-46
Identities = 27/51 (52%), Positives = 30/51 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK L H LVSE L KPA KKRIE LI +DY+ER ENPN +
Sbjct: 930 RKTLSHNLLVSEVYNQLKFPVKPA--DLKKRIESLIDRDYMERDKENPNQY 978
Score = 37 (18.1 bits), Expect = 2.3e-46, Sum P(5) = 2.3e-46
Identities = 12/49 (24%), Positives = 19/49 (38%)
Query: 10 DEGWEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMCSQNTPNN 58
DE W+ KLK +E ++ L+ + N+CS N
Sbjct: 283 DETWQ-------KLKEAVEAIQNSTSIKYNLEELYQAVENLCSYKISAN 324
>ZFIN|ZDB-GENE-041008-208 [details] [associations]
symbol:cul4b "cullin 4B" species:7955 "Danio rerio"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-041008-208 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:BX004980
IPI:IPI00637421 Ensembl:ENSDART00000085295 ArrayExpress:F1R029
Bgee:F1R029 Uniprot:F1R029
Length = 885
Score = 225 (84.3 bits), Expect = 1.1e-45, Sum P(4) = 1.1e-45
Identities = 49/170 (28%), Positives = 88/170 (51%)
Query: 325 LARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVF 384
L++ F+++++ +N I+L+V +L G+WP+Y +++ LP++M++ E+F
Sbjct: 626 LSKDIMVQFKQHMQC-QNIPGNIELTVNILTMGYWPTYVPMEVH----LPAEMVRLQEIF 680
Query: 385 KRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVI 444
K FY K RKL W +LG C + A+F+ EL +S + +L +FN S +
Sbjct: 681 KTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEDIK 740
Query: 445 TQLNLTHDDLVRLLHSLSILYYKILIKEPDTKSISRSDYFELNSKFTDRM 494
+ +L R L SL+ ++L K P +K + D F N F ++
Sbjct: 741 LATGIEDSELRRTLQSLACGKARVLTKIPKSKDVEDGDKFSCNDDFKHKL 790
Score = 180 (68.4 bits), Expect = 1.1e-45, Sum P(4) = 1.1e-45
Identities = 52/181 (28%), Positives = 93/181 (51%)
Query: 68 IPGFDEFGLACFRDLVYDALKHKAK--DAVI--DERER--EQVDRALLANVL-------- 113
+P + GL FR + LK ++K D ++ ERER E VDR+LL ++L
Sbjct: 292 LPSIWDMGLELFRFYIISDLKVQSKTIDGILLLIERERSGEAVDRSLLRSLLSMLSDLQI 351
Query: 114 --DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKL 171
D F + L++T+ Y+ + + P+Y+ + L++E DRV YL + ++ L
Sbjct: 352 YQDSFEQRFLEETNRLYAAEGQRLMQEREVPEYLHHVNKRLEEEADRVITYLDQSTQKSL 411
Query: 172 VEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAGPH---DNYMEY 228
+ V+ +LL + T +L+K G L N++ DLS +Y+ + +R G +++EY
Sbjct: 412 IATVEKQLLGEHLTAILQK---GLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQHWIEY 468
Query: 229 V 229
+
Sbjct: 469 I 469
Score = 134 (52.2 bits), Expect = 1.1e-45, Sum P(4) = 1.1e-45
Identities = 34/100 (34%), Positives = 56/100 (56%)
Query: 232 CFMDHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSGNEKLSDEAIXXXXXX 291
CFM + F +KEAF+ F NK +E +A + D+ L+ +GN++ +DE +
Sbjct: 504 CFMKNEKFVNGMKEAFETFINKRPN--KPAELIAKYVDSKLR-AGNKEATDEELEKMLDK 560
Query: 292 XXXXXXYISD-KDLFAEFYRKKLARRLLFDRSRTL-ARKN 329
+I + KD+F FY+K LA+RLL +S ++ A K+
Sbjct: 561 IMIIFRFIYEGKDVFEAFYKKDLAKRLLVGKSASVDAEKS 600
Score = 112 (44.5 bits), Expect = 1.1e-45, Sum P(4) = 1.1e-45
Identities = 27/51 (52%), Positives = 30/51 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK L H LVSE L KPA KKRIE LI +DY+ER ENPN +
Sbjct: 833 RKTLSHNLLVSEVYNQLKFPVKPA--DLKKRIESLIDRDYMERDKENPNQY 881
>UNIPROTKB|F1P2U1 [details] [associations]
symbol:CUL4A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin ligase complex"
evidence=IEA] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IEA] [GO:0051246 "regulation of
protein metabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0031464
OMA:KVSATLY GO:GO:0051246 EMBL:AADN02017929 EMBL:AADN02017930
EMBL:AADN02017931 IPI:IPI00587191 Ensembl:ENSGALT00000027171
Uniprot:F1P2U1
Length = 741
Score = 233 (87.1 bits), Expect = 2.9e-45, Sum P(4) = 2.9e-45
Identities = 53/170 (31%), Positives = 89/170 (52%)
Query: 325 LARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVF 384
L++ F++Y++ N++ IDL+V +L G+WP+Y +++ L S+MIK EVF
Sbjct: 482 LSKDVMVQFKQYMQ-NQSDPGNIDLTVNILTMGYWPTYTPMEVH----LNSEMIKLQEVF 536
Query: 385 KRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVI 444
K FY K RKL W +LG + A+F+ E +S + +L +FN + S+ ++
Sbjct: 537 KTFYLGKHSGRKLQWQTTLGHAVLKAEFKEGKKEFQVSLFQTLVLLMFNEGDEFSFEEIK 596
Query: 445 TQLNLTHDDLVRLLHSLSILYYKILIKEPDTKSISRSDYFELNSKFTDRM 494
+ +L R L SL+ ++LIK P K + D F N F ++
Sbjct: 597 MATGIEDSELRRTLQSLACGKARVLIKNPKGKDVEDGDKFIFNGDFKHKL 646
Score = 166 (63.5 bits), Expect = 2.9e-45, Sum P(4) = 2.9e-45
Identities = 49/183 (26%), Positives = 95/183 (51%)
Query: 68 IPGFDEFGLACFRD-LVYDA-LKHKAKDAVI--DERER--EQVDRALLANVLDI------ 115
+P + GL FR+ ++ D +++K D ++ ERER E VDR+LL ++L +
Sbjct: 149 LPSIWDMGLELFRNHVISDKQVQNKTIDGILLLIERERSGEAVDRSLLRSLLSMLSDLQV 208
Query: 116 ----FVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKL 171
F + L++T+ Y+ + + P+Y+ + L++E DRV YL + ++ L
Sbjct: 209 YKESFEQRFLEETNCLYAAEGQRLMQEREVPEYLHHVSKRLEEEGDRVITYLDHSTQKPL 268
Query: 172 VEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAGPH---DNYMEY 228
+ V+ +LL + T +L+K G L N++ DL++ Y+ + ++ G ++ EY
Sbjct: 269 IACVEKQLLGEHLTAILQK---GLDNLLDENRISDLTQTYQLFSRVKGGQQILLQHWSEY 325
Query: 229 VTN 231
+ N
Sbjct: 326 IKN 328
Score = 131 (51.2 bits), Expect = 2.9e-45, Sum P(4) = 2.9e-45
Identities = 32/99 (32%), Positives = 54/99 (54%)
Query: 232 CFMDHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSGNEKLSDEAIXXXXXX 291
CF + F +KE+F+ F NK +E +A + D+ L+ +GN++ +DE +
Sbjct: 361 CFQKNEKFINLMKESFETFINKRPN--KPAELIAKYVDSKLR-AGNKEATDEELERILDK 417
Query: 292 XXXXXXYISDKDLFAEFYRKKLARRLLFDRSRTL-ARKN 329
+I KD+F FY+K LA+RLL +S ++ A K+
Sbjct: 418 IMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKS 456
Score = 111 (44.1 bits), Expect = 2.9e-45, Sum P(4) = 2.9e-45
Identities = 26/51 (50%), Positives = 30/51 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK LGH LVSE L KP KKRIE LI +DY+ER +NPN +
Sbjct: 689 RKTLGHNLLVSELYNQLKFPVKPG--DLKKRIESLIDRDYMERDKDNPNQY 737
>UNIPROTKB|F1Q284 [details] [associations]
symbol:CUL4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K10609 CTD:8451 OMA:KVSATLY
EMBL:AAEX03013408 RefSeq:XP_849542.3 Ensembl:ENSCAFT00000010211
GeneID:607683 KEGG:cfa:607683 Uniprot:F1Q284
Length = 761
Score = 229 (85.7 bits), Expect = 6.9e-44, Sum P(4) = 6.9e-44
Identities = 51/170 (30%), Positives = 89/170 (52%)
Query: 325 LARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVF 384
L++ F++Y++ N++ IDL+V +L G+WP+Y +++ L +MIK EVF
Sbjct: 502 LSKDIMVQFKQYMQ-NQSDPGSIDLTVNILTMGYWPTYTPMEVH----LTPEMIKLQEVF 556
Query: 385 KRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVI 444
K FY K RKL W +LG + A+F+ E +S + +L +FN + S+ ++
Sbjct: 557 KTFYLGKHSGRKLQWQTTLGHAVLKAEFKEGKKEFQVSLFQTLVLLMFNEGDGFSFEEIK 616
Query: 445 TQLNLTHDDLVRLLHSLSILYYKILIKEPDTKSISRSDYFELNSKFTDRM 494
+ +L R L SL+ ++L+K P K + D F N +F ++
Sbjct: 617 MATGIEDSELRRTLQSLACGKARVLVKSPKGKEVEDGDTFMFNGEFKHKL 666
Score = 163 (62.4 bits), Expect = 6.9e-44, Sum P(4) = 6.9e-44
Identities = 51/181 (28%), Positives = 93/181 (51%)
Query: 68 IPGFDEFGLACFRD-LVYDAL-KHKAKDAVI--DERER--EQVDRALLANVL-------- 113
+P + GL FR+ ++ D + + K+ D ++ ERER E VDR+LL ++L
Sbjct: 169 LPSIWDMGLELFRNHIISDKMVQSKSIDGILLLIERERNGEAVDRSLLRSLLSMLSDLQV 228
Query: 114 --DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKL 171
D F L++T+ Y+ + + P+Y+ + L++E DRV YL + ++ L
Sbjct: 229 YKDSFELKFLEETNCLYAAEGQRLMQEREVPEYLNHVSKRLEEEGDRVITYLDHSTQKPL 288
Query: 172 VEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAGPH---DNYMEY 228
+ V+ +LL + T +L K G L N+V DL++MY+ + ++ G ++ EY
Sbjct: 289 IACVEKQLLGEHLTAILHK---GLDHLLDENRVPDLTQMYQLFSRVKGGQQILLQHWSEY 345
Query: 229 V 229
+
Sbjct: 346 I 346
Score = 126 (49.4 bits), Expect = 6.9e-44, Sum P(4) = 6.9e-44
Identities = 32/99 (32%), Positives = 53/99 (53%)
Query: 232 CFMDHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSGNEKLSDEAIXXXXXX 291
CF + F +KE+F+ F NK +E +A D+ L+ +GN++ +DE +
Sbjct: 381 CFQRNEKFINLMKESFETFINKRPN--KPAELIAKHVDSKLR-AGNKEATDEELERILDK 437
Query: 292 XXXXXXYISDKDLFAEFYRKKLARRLLFDRSRTL-ARKN 329
+I KD+F FY+K LA+RLL +S ++ A K+
Sbjct: 438 VMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKS 476
Score = 111 (44.1 bits), Expect = 6.9e-44, Sum P(4) = 6.9e-44
Identities = 26/51 (50%), Positives = 30/51 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK LGH LVSE L KP KKRIE LI +DY+ER +NPN +
Sbjct: 709 RKTLGHNLLVSELYNQLKFPVKPG--DLKKRIESLIDRDYMERDKDNPNQY 757
>MGI|MGI:1914487 [details] [associations]
symbol:Cul4a "cullin 4A" species:10090 "Mus musculus"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IMP]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0031461
"cullin-RING ubiquitin ligase complex" evidence=IEA] [GO:0031464
"Cul4A-RING ubiquitin ligase complex" evidence=ISO] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0045750 "positive regulation of S phase of mitotic cell cycle"
evidence=IMP] [GO:0051246 "regulation of protein metabolic process"
evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 MGI:MGI:1914487 GO:GO:0019048 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511
GO:GO:0045732 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0045750
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176712 KO:K10609 GO:GO:0031464 HOVERGEN:HBG003619
CTD:8451 EMBL:AK168215 EMBL:AK170722 EMBL:BC010211 IPI:IPI00321407
RefSeq:NP_666319.2 UniGene:Mm.212861 ProteinModelPortal:Q3TCH7
SMR:Q3TCH7 STRING:Q3TCH7 PhosphoSite:Q3TCH7 PaxDb:Q3TCH7
PRIDE:Q3TCH7 Ensembl:ENSMUST00000016680 GeneID:99375 KEGG:mmu:99375
UCSC:uc009kww.2 InParanoid:Q3TCH7 OMA:DREVPEY OrthoDB:EOG42FSH0
ChiTaRS:CUL4A NextBio:353901 Bgee:Q3TCH7 CleanEx:MM_CUL4A
Genevestigator:Q3TCH7 GermOnline:ENSMUSG00000031446 Uniprot:Q3TCH7
Length = 759
Score = 229 (85.7 bits), Expect = 8.6e-44, Sum P(4) = 8.6e-44
Identities = 51/170 (30%), Positives = 90/170 (52%)
Query: 325 LARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVF 384
L++ F+++++ N++A IDL+V +L G+WP+Y +++ LP +M++ EVF
Sbjct: 500 LSKDIMVHFKQHMQ-NQSAPGPIDLTVNILTMGYWPTYTPMEVH----LPPEMVRLQEVF 554
Query: 385 KRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVI 444
K FY K RKL W +LG + A F+ E +S + +L +FN + S+ ++
Sbjct: 555 KTFYLGKHSGRKLQWQTTLGHAVLKADFKEGKKEFQVSLFQTLVLLMFNEGDGFSFEEIK 614
Query: 445 TQLNLTHDDLVRLLHSLSILYYKILIKEPDTKSISRSDYFELNSKFTDRM 494
+ +L R L SL+ ++LIK P K + D F N+ F ++
Sbjct: 615 MATGIEDSELRRTLQSLACGKARVLIKSPKGKEVEDGDKFIFNADFKHKL 664
Score = 166 (63.5 bits), Expect = 8.6e-44, Sum P(4) = 8.6e-44
Identities = 50/181 (27%), Positives = 91/181 (50%)
Query: 68 IPGFDEFGLACFRD-LVYDAL-KHKAKDAVI----DEREREQVDRALLANVL-------- 113
+P + GL FR+ ++ D + + K D ++ ER E VDR+LL ++L
Sbjct: 167 LPSIWDMGLELFRNHIISDRMVQSKTIDGILLLIGRERSGEAVDRSLLRSLLSMLSDLQV 226
Query: 114 --DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKL 171
D F L++T+ Y+ + P+Y+ + L++E DRV YL + ++ L
Sbjct: 227 YKDSFELKFLEETNCLYAAEGQRLMQDREVPEYLNHVSKRLEEEADRVITYLDHSTQKPL 286
Query: 172 VEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAGPH---DNYMEY 228
+ V+ +LL + T +L+K G L N+V DL++MY+ + ++ G H ++ EY
Sbjct: 287 IACVEKQLLGEHLTAILQK---GLEHLLDENRVPDLTQMYQLFSRVKGGQHALLQHWSEY 343
Query: 229 V 229
+
Sbjct: 344 I 344
Score = 127 (49.8 bits), Expect = 8.6e-44, Sum P(4) = 8.6e-44
Identities = 34/108 (31%), Positives = 55/108 (50%)
Query: 223 DNYMEYVTNCFMDHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSGNEKLSD 282
D V CF + F +KE+F+ F NK +E +A D+ L+ +GN++ +D
Sbjct: 370 DKVDHVVEVCFQRNERFINLMKESFETFINKRPN--KPAELIAKHVDSKLR-AGNKEATD 426
Query: 283 EAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRSRTL-ARKN 329
E + +I KD+F FY+K LA+RLL +S ++ A K+
Sbjct: 427 EELERILDKIMILFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKS 474
Score = 106 (42.4 bits), Expect = 8.6e-44, Sum P(4) = 8.6e-44
Identities = 25/51 (49%), Positives = 30/51 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK LGH LVSE L KP KKRIE LI +DY+ER ++PN +
Sbjct: 707 RKTLGHNLLVSELYNQLKFPVKPG--DLKKRIESLIDRDYMERDKDSPNQY 755
>UNIPROTKB|Q13619 [details] [associations]
symbol:CUL4A "Cullin-4A" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0045750 "positive
regulation of S phase of mitotic cell cycle" evidence=IEA]
[GO:0051246 "regulation of protein metabolic process" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IDA] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=IDA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=TAS] [GO:0008285 "negative regulation
of cell proliferation" evidence=TAS] [GO:0097193 "intrinsic
apoptotic signaling pathway" evidence=TAS] [GO:0007050 "cell cycle
arrest" evidence=TAS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0019048 GO:GO:0008285 GO:GO:0000082
GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007050
GO:GO:0016567 GO:GO:0006511 GO:GO:0097193 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159 SUPFAM:SSF74788
KO:K10609 GO:GO:0031464 HOVERGEN:HBG003619 EMBL:AF077188
EMBL:AY365124 EMBL:AB178950 EMBL:AL136221 EMBL:BC008308
EMBL:AB012193 EMBL:U58090 IPI:IPI00419273 IPI:IPI00549919
RefSeq:NP_001008895.1 RefSeq:NP_003580.1 UniGene:Hs.339735 PDB:2HYE
PDB:4A0K PDBsum:2HYE PDBsum:4A0K ProteinModelPortal:Q13619
SMR:Q13619 DIP:DIP-31610N IntAct:Q13619 MINT:MINT-4532640
STRING:Q13619 PhosphoSite:Q13619 DMDM:108936013 PaxDb:Q13619
PRIDE:Q13619 DNASU:8451 Ensembl:ENST00000326335
Ensembl:ENST00000375440 Ensembl:ENST00000375441
Ensembl:ENST00000451881 GeneID:8451 KEGG:hsa:8451 UCSC:uc010agu.3
CTD:8451 GeneCards:GC13P113863 HGNC:HGNC:2554 MIM:603137
neXtProt:NX_Q13619 PharmGKB:PA27050 InParanoid:Q13619 OMA:KVSATLY
EvolutionaryTrace:Q13619 GenomeRNAi:8451 NextBio:31624
ArrayExpress:Q13619 Bgee:Q13619 CleanEx:HS_CUL4A
Genevestigator:Q13619 GermOnline:ENSG00000139842 GO:GO:0051246
Uniprot:Q13619
Length = 759
Score = 223 (83.6 bits), Expect = 1.1e-43, Sum P(4) = 1.1e-43
Identities = 51/170 (30%), Positives = 89/170 (52%)
Query: 325 LARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVF 384
L++ F+++++ N++ IDL+V +L G+WP+Y +++ L +MIK EVF
Sbjct: 500 LSKDIMVHFKQHMQ-NQSDSGPIDLTVNILTMGYWPTYTPMEVH----LTPEMIKLQEVF 554
Query: 385 KRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVI 444
K FY K RKL W +LG + A+F+ E +S + +L +FN + S+ ++
Sbjct: 555 KAFYLGKHSGRKLQWQTTLGHAVLKAEFKEGKKEFQVSLFQTLVLLMFNEGDGFSFEEIK 614
Query: 445 TQLNLTHDDLVRLLHSLSILYYKILIKEPDTKSISRSDYFELNSKFTDRM 494
+ +L R L SL+ ++LIK P K + D F N +F ++
Sbjct: 615 MATGIEDSELRRTLQSLACGKARVLIKSPKGKEVEDGDKFIFNGEFKHKL 664
Score = 165 (63.1 bits), Expect = 1.1e-43, Sum P(4) = 1.1e-43
Identities = 52/181 (28%), Positives = 92/181 (50%)
Query: 68 IPGFDEFGLACFRD-LVYDAL-KHKAKDAVI--DERER--EQVDRALLANVL-------- 113
+P + GL FR ++ D + + K D ++ ERER E VDR+LL ++L
Sbjct: 167 LPSIWDMGLELFRTHIISDKMVQSKTIDGILLLIERERSGEAVDRSLLRSLLGMLSDLQV 226
Query: 114 --DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKL 171
D F L++T+ Y+ + + P+Y+ + L++E DRV YL + ++ L
Sbjct: 227 YKDSFELKFLEETNCLYAAEGQRLMQEREVPEYLNHVSKRLEEEGDRVITYLDHSTQKPL 286
Query: 172 VEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAGPH---DNYMEY 228
+ V+ +LL + T +L+K G L N+V DL++MY+ + +R G ++ EY
Sbjct: 287 IACVEKQLLGEHLTAILQK---GLDHLLDENRVPDLAQMYQLFSRVRGGQQALLQHWSEY 343
Query: 229 V 229
+
Sbjct: 344 I 344
Score = 129 (50.5 bits), Expect = 1.1e-43, Sum P(4) = 1.1e-43
Identities = 32/99 (32%), Positives = 53/99 (53%)
Query: 232 CFMDHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSGNEKLSDEAIXXXXXX 291
CF + F +KE+F+ F NK +E +A D+ L+ +GN++ +DE +
Sbjct: 379 CFQKNERFVNLMKESFETFINKRPN--KPAELIAKHVDSKLR-AGNKEATDEELERTLDK 435
Query: 292 XXXXXXYISDKDLFAEFYRKKLARRLLFDRSRTL-ARKN 329
+I KD+F FY+K LA+RLL +S ++ A K+
Sbjct: 436 IMILFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKS 474
Score = 111 (44.1 bits), Expect = 1.1e-43, Sum P(4) = 1.1e-43
Identities = 26/51 (50%), Positives = 30/51 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK LGH LVSE L KP KKRIE LI +DY+ER +NPN +
Sbjct: 707 RKTLGHNLLVSELYNQLKFPVKPG--DLKKRIESLIDRDYMERDKDNPNQY 755
>UNIPROTKB|F1N3S4 [details] [associations]
symbol:CUL4A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051246 "regulation of protein metabolic process"
evidence=IEA] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0031464
OMA:KVSATLY GO:GO:0051246 EMBL:DAAA02034947 IPI:IPI00699975
Ensembl:ENSBTAT00000026769 Uniprot:F1N3S4
Length = 720
Score = 226 (84.6 bits), Expect = 5.7e-43, Sum P(4) = 5.7e-43
Identities = 51/170 (30%), Positives = 89/170 (52%)
Query: 325 LARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVF 384
L++ F++Y++ N++ IDL+V +L G+WP+Y +++ L +MIK EVF
Sbjct: 461 LSKDIMVHFKQYMQ-NQSDPGSIDLTVNILTMGYWPTYTPMEVH----LTPEMIKLQEVF 515
Query: 385 KRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVI 444
K FY K RKL W +LG + A+F+ E +S + +L +FN + S+ +
Sbjct: 516 KTFYLGKHSGRKLQWQTTLGHAVLKAEFKEGKKEFQVSLFQTLVLLMFNEGDGFSFEDIR 575
Query: 445 TQLNLTHDDLVRLLHSLSILYYKILIKEPDTKSISRSDYFELNSKFTDRM 494
+ +L R L SL+ ++L+K P K + D F N++F ++
Sbjct: 576 MATGIEDSELRRTLQSLACGKARVLLKSPKGKEVEDGDKFLFNAEFKHKL 625
Score = 162 (62.1 bits), Expect = 5.7e-43, Sum P(4) = 5.7e-43
Identities = 50/169 (29%), Positives = 88/169 (52%)
Query: 68 IPGFDEFGLACFRD-LVYDAL-KHKAKDAVI--DERER--EQVDRALLANVL-------- 113
+P + GL FR+ ++ D + + K D ++ ERER E VDR+LL ++L
Sbjct: 128 LPSIWDMGLELFRNHIISDKMVQTKTIDGILLLIERERSGEAVDRSLLRSLLGMLSDLQV 187
Query: 114 --DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKL 171
D F L++T+ Y+ + + P+Y+ + L++E DRV YL + ++ L
Sbjct: 188 YKDSFELKFLEETNCLYAAEGQRLMQEREVPEYLDHVSKRLEEEADRVITYLDHSTQKPL 247
Query: 172 VEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG 220
+ V+ +LL + T +L+K G L N+V DL++MY+ + +R G
Sbjct: 248 IACVEKQLLGEHLTAILQK---GLDHLLDENRVPDLTQMYQLFSRVRGG 293
Score = 125 (49.1 bits), Expect = 5.7e-43, Sum P(4) = 5.7e-43
Identities = 32/99 (32%), Positives = 52/99 (52%)
Query: 232 CFMDHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSGNEKLSDEAIXXXXXX 291
CF F +KE+F+ F NK +E +A D+ L+ +GN++ +DE +
Sbjct: 340 CFQRSEKFVNLMKESFETFINKRPN--KPAELIAKHVDSKLR-AGNKEATDEELERMLDK 396
Query: 292 XXXXXXYISDKDLFAEFYRKKLARRLLFDRSRTL-ARKN 329
+I KD+F FY+K LA+RLL +S ++ A K+
Sbjct: 397 VMILFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKS 435
Score = 106 (42.4 bits), Expect = 5.7e-43, Sum P(4) = 5.7e-43
Identities = 25/51 (49%), Positives = 30/51 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK LGH LVSE L KP KKRIE LI +DY+ER ++PN +
Sbjct: 668 RKTLGHNLLVSELYNQLKFPVKPG--DLKKRIESLIDRDYMERDKDSPNQY 716
>FB|FBgn0033260 [details] [associations]
symbol:Cul-4 "Cullin-4" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0051533 "positive regulation of NFAT protein
import into nucleus" evidence=IMP] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0007307 "eggshell chorion gene
amplification" evidence=IDA] [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IGI] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:AE013599 GO:GO:0007095 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0051533 GO:GO:0006511 GO:GO:0004842
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0007307 GeneTree:ENSGT00550000074299
KO:K10609 OMA:FEDSLDF CTD:35780 EMBL:BT021374 EMBL:BT050475
RefSeq:NP_001163084.1 RefSeq:NP_610352.2 UniGene:Dm.4527 SMR:Q5BI50
IntAct:Q5BI50 STRING:Q5BI50 EnsemblMetazoa:FBtr0088821
EnsemblMetazoa:FBtr0301355 GeneID:35780 KEGG:dme:Dmel_CG8711
UCSC:CG8711-RA FlyBase:FBgn0033260 InParanoid:Q5BI50
OrthoDB:EOG4M0CGM GenomeRNAi:35780 NextBio:795178 Uniprot:Q5BI50
Length = 821
Score = 249 (92.7 bits), Expect = 9.3e-43, Sum P(5) = 9.3e-43
Identities = 54/171 (31%), Positives = 94/171 (54%)
Query: 325 LARKNQTGFEKY-LRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEV 383
L+R F + L N++ H +DL V++L G+WP+Y +++ +P Q I ++
Sbjct: 561 LSRDINIAFRGHALSNNRDVH-NLDLCVSILTMGYWPTYAPTEVT----MPPQFINPQQI 615
Query: 384 FKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQV 443
F +FY K RKL W +LG C + A+F+ EL++S + A +L LFN LSY ++
Sbjct: 616 FNKFYLEKHSGRKLQWQPTLGNCMLRAQFDAGPKELLVSLFQALVLLLFNDKPVLSYEEI 675
Query: 444 ITQLNLTHDDLVRLLHSLSILYYKILIKEPDTKSISRSDYFELNSKFTDRM 494
+ + +L R L SL+ +++ K P + I D F+ N++FT+++
Sbjct: 676 LAATLIEDGELRRTLQSLACGRARVITKTPKGREILDGDQFDFNNEFTNKL 726
Score = 134 (52.2 bits), Expect = 9.3e-43, Sum P(5) = 9.3e-43
Identities = 32/97 (32%), Positives = 51/97 (52%)
Query: 229 VTNCFMDHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSGNEKLSDEAIXXX 288
V CF + F +L+EAF+ F N+ +E +A + D L+ SGN+ +DE +
Sbjct: 437 VRTCFEHNEKFTNSLREAFEFFINQRAN--KPAELIAKYVDMKLR-SGNKGTTDEELEKT 493
Query: 289 XXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRSRTL 325
+I KD+F FY+K LA+RLL +S ++
Sbjct: 494 LDKIMVLFRFIHGKDVFEAFYKKDLAKRLLVGKSASV 530
Score = 132 (51.5 bits), Expect = 9.3e-43, Sum P(5) = 9.3e-43
Identities = 37/133 (27%), Positives = 66/133 (49%)
Query: 98 EREREQVDRALLANVL----DI------FVEHMLQDTSSYYSRISTNWILKDPCPDYMRK 147
ER+ VDR LL +++ D+ F E L T+ Y S + + P+Y++
Sbjct: 264 ERQGSTVDRGLLKSLVRMLCDLQIYTSSFEEKFLDATNQLYKAESQRKMQELEVPEYLQH 323
Query: 148 AEECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDL 207
+ L +E +R+ YL S+ + L+ V+ ELL + T +L+K G +L N++ DL
Sbjct: 324 VNKRLAEENERLRHYLDSSTKHPLIYNVEKELLAEHLTSILQK---GLDSLLEDNRLSDL 380
Query: 208 SRMYRFYRTIRAG 220
+ +Y ++ G
Sbjct: 381 TLLYGLLSRVKNG 393
Score = 98 (39.6 bits), Expect = 9.3e-43, Sum P(5) = 9.3e-43
Identities = 23/51 (45%), Positives = 29/51 (56%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK L H L++E L KPA KKRIE LI +DY+ER +N N +
Sbjct: 769 RKTLSHNLLITELFNQLTFPVKPA--DLKKRIESLIDRDYMERDKDNQNQY 817
Score = 41 (19.5 bits), Expect = 9.3e-43, Sum P(5) = 9.3e-43
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 57 NNNSASCKRRNIPGFDEFG 75
N NSAS +P F + G
Sbjct: 51 NMNSASTNGERLPNFSKLG 69
Score = 40 (19.1 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 8/36 (22%), Positives = 21/36 (58%)
Query: 484 FELNSKFTDRMRGSRSLSHHRKVLGHQQLVSECIEL 519
FE N KFT+ +R + +++ +L+++ +++
Sbjct: 441 FEHNEKFTNSLREAFEFFINQRANKPAELIAKYVDM 476
>UNIPROTKB|F1RN43 [details] [associations]
symbol:CUL4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051246 "regulation of protein metabolic process"
evidence=IEA] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0031464
OMA:KVSATLY GO:GO:0051246 EMBL:FP236214 Ensembl:ENSSSCT00000010475
Uniprot:F1RN43
Length = 761
Score = 227 (85.0 bits), Expect = 1.0e-42, Sum P(4) = 1.0e-42
Identities = 51/170 (30%), Positives = 87/170 (51%)
Query: 325 LARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVF 384
L++ F++Y++ N++ IDL+V +L G+WP+Y D++ L +M+K EVF
Sbjct: 502 LSKDIMVHFKQYMQ-NQSDPGSIDLTVNILTMGYWPTYTPMDVH----LTPEMVKLQEVF 556
Query: 385 KRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVI 444
K FY K RKL W +LG + A+F+ E +S + +L +FN + + ++
Sbjct: 557 KTFYLGKHSGRKLQWQTALGHAVLKAEFKEGKKEFQVSLFQTLVLLMFNEGDGFGFEEIK 616
Query: 445 TQLNLTHDDLVRLLHSLSILYYKILIKEPDTKSISRSDYFELNSKFTDRM 494
+ +L R L SL+ ++LIK P K + D F N F ++
Sbjct: 617 AATGIEDSELRRTLQSLACGKARVLIKSPKGKEVEDGDKFFFNGDFKHKL 666
Score = 159 (61.0 bits), Expect = 1.0e-42, Sum P(4) = 1.0e-42
Identities = 50/181 (27%), Positives = 89/181 (49%)
Query: 68 IPGFDEFGLACFRD-LVYDAL-KHKAKDAVI----DEREREQVDRALLANVL-------- 113
+P + GL FR ++ D + + K D ++ ER E VDR+LL +L
Sbjct: 169 LPSIWDMGLELFRSHVISDRMVQTKTIDGILLLIARERSGEAVDRSLLRGLLGMLSDLQV 228
Query: 114 --DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKL 171
D F L++T+ Y+ + + P+Y+ + L++E DRV YL + ++ L
Sbjct: 229 YKDSFELKFLEETNCLYAAEGQRLMQEREVPEYLNHVSKRLEEEGDRVITYLDHSTQKPL 288
Query: 172 VEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAGPH---DNYMEY 228
+ V+ +LL + T +L+K G L N+V DL++MY+ + +R G ++ EY
Sbjct: 289 IACVEKQLLGEHLTAILQK---GLDHLLDENRVPDLTQMYQLFSRVRGGQQALLQHWSEY 345
Query: 229 V 229
+
Sbjct: 346 I 346
Score = 126 (49.4 bits), Expect = 1.0e-42, Sum P(4) = 1.0e-42
Identities = 32/99 (32%), Positives = 53/99 (53%)
Query: 232 CFMDHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSGNEKLSDEAIXXXXXX 291
CF + F +KE+F+ F NK +E +A D+ L+ +GN++ +DE +
Sbjct: 381 CFQRNEKFINLMKESFEAFINKRPN--KPAELIAKHVDSKLR-AGNKEATDEELERILDK 437
Query: 292 XXXXXXYISDKDLFAEFYRKKLARRLLFDRSRTL-ARKN 329
+I KD+F FY+K LA+RLL +S ++ A K+
Sbjct: 438 VMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKS 476
Score = 106 (42.4 bits), Expect = 1.0e-42, Sum P(4) = 1.0e-42
Identities = 25/51 (49%), Positives = 30/51 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK LGH LVSE L KP KKRIE LI +DY+ER ++PN +
Sbjct: 709 RKTLGHNLLVSELYNQLKFPVKPG--DLKKRIESLIDRDYMERDKDSPNQY 757
>TAIR|locus:2200670 [details] [associations]
symbol:CUL3 "AT1G26830" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0009639 "response to red or far
red light" evidence=RCA;IMP] [GO:0009911 "positive regulation of
flower development" evidence=IMP] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=IPI] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IGI] [GO:0009960 "endosperm development"
evidence=IGI] [GO:0005829 "cytosol" evidence=IDA] [GO:0008284
"positive regulation of cell proliferation" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] InterPro:IPR001373
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009793 GO:GO:0009639
GO:GO:0009911 GO:GO:0006511 GO:GO:0009960 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031461 EMBL:AC005508 EMBL:AC006535
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 HSSP:Q9JLV5
EMBL:AJ319540 EMBL:AJ344252 EMBL:AK230392 IPI:IPI00528089
PIR:A86395 RefSeq:NP_174005.1 UniGene:At.27879
ProteinModelPortal:Q9ZVH4 SMR:Q9ZVH4 DIP:DIP-33568N IntAct:Q9ZVH4
STRING:Q9ZVH4 PaxDb:Q9ZVH4 PRIDE:Q9ZVH4 EnsemblPlants:AT1G26830.1
GeneID:839226 KEGG:ath:AT1G26830 TAIR:At1g26830 InParanoid:Q9ZVH4
KO:K03869 OMA:ATFYGPI PhylomeDB:Q9ZVH4 ProtClustDB:CLSN2912776
Genevestigator:Q9ZVH4 Uniprot:Q9ZVH4
Length = 732
Score = 208 (78.3 bits), Expect = 4.5e-40, Sum P(4) = 4.5e-40
Identities = 56/150 (37%), Positives = 81/150 (54%)
Query: 346 GIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQ 405
G L V VL TG WP+ + P NLP+++ E F+ +Y R+LSW ++G
Sbjct: 488 GPTLIVQVLTTGSWPTQPAV---PC-NLPAEVSVLCEKFRSYYLGTHTGRRLSWQTNMGT 543
Query: 406 CHINAKF-ELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSIL 464
I A F + + EL +ST+ +L LFN S+RLSY ++ + DL R L SL+ +
Sbjct: 544 ADIKAIFGKGQKHELNVSTFQMCVLMLFNNSDRLSYKEIEQATEIPAADLKRCLQSLACV 603
Query: 465 YYKILIK-EPDTKSISRSDYFELNSKFTDR 493
K +IK EP +K I D F +N KFT +
Sbjct: 604 KGKNVIKKEPMSKDIGEEDLFVVNDKFTSK 633
Score = 186 (70.5 bits), Expect = 4.5e-40, Sum P(4) = 4.5e-40
Identities = 46/150 (30%), Positives = 79/150 (52%)
Query: 83 VYDALKHKAKDAVIDEREREQVDRALLANVLDIFV---EHMLQD---------TSSYYSR 130
++ L + D V ER E +DR L+ NV+ +F+ E + Q+ +S +Y
Sbjct: 151 IHTRLLNTLLDLVQKERIGEVIDRGLMRNVIKMFMDLGESVYQEDFEKPFLDASSEFYKV 210
Query: 131 ISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVYATQLLEK 190
S +I C DY++K+E+ L +E +RV+ YL + EEK+ V+ E++ + +L+
Sbjct: 211 ESQEFIESCDCGDYLKKSEKRLTEEIERVAHYLDAKSEEKITSVVEKEMIANHMQRLVHM 270
Query: 191 EQSGCGALFRGNKVDDLSRMYRFYRTIRAG 220
E SG + +K +DL RMY +R + G
Sbjct: 271 ENSGLVNMLLNDKYEDLGRMYNLFRRVTNG 300
Score = 116 (45.9 bits), Expect = 4.5e-40, Sum P(4) = 4.5e-40
Identities = 28/96 (29%), Positives = 49/96 (51%)
Query: 223 DNYMEYVTNCFMDHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSGNEKLSD 282
D Y + + F + FQ AL +F+ F N S E ++ F D+ L+K G + ++D
Sbjct: 341 DKYDKIINTAFGNDKTFQNALNSSFEYFINLNA---RSPEFISLFVDDKLRK-GLKGITD 396
Query: 283 EAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLL 318
+ Y+ +KD+F ++Y++ LA+RLL
Sbjct: 397 VDVEVILDKVMMLFRYLQEKDVFEKYYKQHLAKRLL 432
Score = 84 (34.6 bits), Expect = 4.5e-40, Sum P(4) = 4.5e-40
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLER 546
RK+L H +++E + L F KKRIE LI +D+LER
Sbjct: 678 RKILDHNNIIAEVTKQLQPRFLANPTEIKKRIESLIERDFLER 720
Score = 45 (20.9 bits), Expect = 1.4e-25, Sum P(4) = 1.4e-25
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 75 GLACFRDLVYDALKHKAKDAVID-EREREQVDRALLANVLDIFVEHMLQDTSSYYSRIST 133
GL RD++ L+ K V D E+ ++ V+ FV+ +L + Y I+T
Sbjct: 300 GLVTVRDVMTSHLREMGKQLVTDPEKSKDPVE----------FVQRLLDERDKYDKIINT 349
>TAIR|locus:2162060 [details] [associations]
symbol:CUL4 "cullin4" species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0031461 "cullin-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009640 "photomorphogenesis" evidence=RCA;IMP]
[GO:0048366 "leaf development" evidence=RCA;IMP] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=IPI] [GO:0000151
"ubiquitin ligase complex" evidence=IPI] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0009908 "flower development"
evidence=IMP] [GO:0010100 "negative regulation of
photomorphogenesis" evidence=RCA;IMP] [GO:0048367 "shoot system
development" evidence=IMP] [GO:0009755 "hormone-mediated signaling
pathway" evidence=RCA;IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0006281 "DNA repair" evidence=RCA;IMP]
[GO:0048575 "short-day photoperiodism, flowering" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0009845 "seed germination" evidence=RCA] [GO:0009880 "embryonic
pattern specification" evidence=RCA] [GO:0009909 "regulation of
flower development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA] [GO:0050826
"response to freezing" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009738 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009640 GO:GO:0010182
GO:GO:0009755 GO:GO:0006511 GO:GO:0009908 GO:GO:0048366
GO:GO:0000209 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0048825
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 KO:K10609
GO:GO:0080008 GO:GO:0010100 HSSP:Q9JLV5 OMA:FEDSLDF EMBL:AJ318018
EMBL:AB025620 EMBL:AY091113 EMBL:AY084267 IPI:IPI00538554
RefSeq:NP_568658.1 UniGene:At.20972 ProteinModelPortal:Q8LGH4
SMR:Q8LGH4 DIP:DIP-40462N IntAct:Q8LGH4 STRING:Q8LGH4 PaxDb:Q8LGH4
PRIDE:Q8LGH4 EnsemblPlants:AT5G46210.1 GeneID:834663
KEGG:ath:AT5G46210 TAIR:At5g46210 InParanoid:Q8LGH4
PhylomeDB:Q8LGH4 ProtClustDB:CLSN2689940 Genevestigator:Q8LGH4
GO:GO:0048575 Uniprot:Q8LGH4
Length = 792
Score = 241 (89.9 bits), Expect = 5.4e-39, Sum P(4) = 5.4e-39
Identities = 53/166 (31%), Positives = 88/166 (53%)
Query: 325 LARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVF 384
L+++ F++ + +GI++SV VL TG+WP+Y D+ LP ++ ++F
Sbjct: 532 LSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVK----LPHELNVYQDIF 587
Query: 385 KRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVI 444
K FY +K R+L W SLG C + A F EL +S + A +L LFN + +LS+ +
Sbjct: 588 KEFYLSKYSGRRLMWQNSLGHCVLKADFSKGKKELAVSLFQAVVLMLFNDAMKLSFEDIK 647
Query: 445 TQLNLTHDDLVRLLHSLSILYYKILIKEPDTKSISRSDYFELNSKF 490
++ +L R L SL+ ++L K P + + D FE N +F
Sbjct: 648 DSTSIEDKELRRTLQSLACGKVRVLQKNPKGRDVEDGDEFEFNDEF 693
Score = 131 (51.2 bits), Expect = 5.4e-39, Sum P(4) = 5.4e-39
Identities = 45/169 (26%), Positives = 80/169 (47%)
Query: 67 NIPGFDEFGLACFR---DLVYDALKHKAKDAV-IDERER--EQVDRALLANVLDIFVE-- 118
N+ E GL FR L + + K + + E+ER E V+R LL+++L +F
Sbjct: 199 NVRSLWEMGLQLFRKHLSLAPEVEQRTVKGLLSMIEKERLAEAVNRTLLSHLLKMFTALG 258
Query: 119 -HM-------LQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEK 170
+M L+ TS +Y+ ++ + P+Y++ E L +E +R Y+ + +
Sbjct: 259 IYMESFEKPFLEGTSEFYAAEGMKYMQQSDVPEYLKHVEGRLHEENERCILYIDAVTRKP 318
Query: 171 LVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRA 219
L+ V+ +LL + +LEK G L G + +DL RM + + A
Sbjct: 319 LITTVERQLLERHILVVLEK---GFTTLMDGRRTEDLQRMQTLFSRVNA 364
Score = 106 (42.4 bits), Expect = 5.4e-39, Sum P(4) = 5.4e-39
Identities = 29/98 (29%), Positives = 49/98 (50%)
Query: 233 FMDHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSGNEKLSDEAIXXXXXXX 292
F + F +K++F+ N +E +A F D L+ +GN+ S+E +
Sbjct: 412 FYKNESFGNTIKDSFEHLINLRQN--RPAELIAKFLDEKLR-AGNKGTSEEELESVLEKV 468
Query: 293 XXXXXYISDKDLFAEFYRKKLARRLLFDRSRTL-ARKN 329
+I KD+F FY+K LA+RLL +S ++ A K+
Sbjct: 469 LVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKS 506
Score = 103 (41.3 bits), Expect = 5.4e-39, Sum P(4) = 5.4e-39
Identities = 24/51 (47%), Positives = 30/51 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RKVL H L++E + L KPA KKRIE LI ++YLER NP +
Sbjct: 740 RKVLSHTLLITELFQQLKFPIKPA--DLKKRIESLIDREYLEREKSNPQIY 788
Score = 47 (21.6 bits), Expect = 4.0e-11, Sum P(3) = 4.0e-11
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 302 KDLFAEFYRKKLA-RRLLFDRS 322
+D+F EFY K + RRL++ S
Sbjct: 584 QDIFKEFYLSKYSGRRLMWQNS 605
Score = 43 (20.2 bits), Expect = 6.0e-30, Sum P(4) = 6.0e-30
Identities = 22/94 (23%), Positives = 43/94 (45%)
Query: 80 RDLVY-DALKHKAKDAVIDEREREQVDRALLANVLDIFVEHM-------LQDTSSYYSRI 131
R ++Y DA+ K +I ER+ ++R +L + F M LQ + +SR+
Sbjct: 306 RCILYIDAVTRKP---LITTVERQLLERHILVVLEKGFTTLMDGRRTEDLQRMQTLFSRV 362
Query: 132 STNWILKDPCPDYMRKAEECLKKERDRVSRYLQS 165
+ L+ Y+RK + + + ++ +QS
Sbjct: 363 NALESLRQALSSYVRKTGQKIVMDEEKDKDMVQS 396
>TAIR|locus:2205020 [details] [associations]
symbol:CUL3B "AT1G69670" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=IPI] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IGI;RCA] [GO:0009960 "endosperm
development" evidence=IGI] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009880
"embryonic pattern specification" evidence=RCA] [GO:0010072
"primary shoot apical meristem specification" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0010431 "seed maturation" evidence=RCA]
[GO:0045010 "actin nucleation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] [GO:0045595 "regulation of cell
differentiation" evidence=RCA] [GO:0048765 "root hair cell
differentiation" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001373 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0009793 GO:GO:0016567 GO:GO:0006511 GO:GO:0009960
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 EMBL:AC013289
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 HSSP:Q9JLV5
KO:K03869 ProtClustDB:CLSN2912776 EMBL:AJ344541 IPI:IPI00529547
PIR:E96718 RefSeq:NP_177125.3 UniGene:At.35390
ProteinModelPortal:Q9C9L0 SMR:Q9C9L0 IntAct:Q9C9L0 STRING:Q9C9L0
PRIDE:Q9C9L0 EnsemblPlants:AT1G69670.1 GeneID:843303
KEGG:ath:AT1G69670 TAIR:At1g69670 InParanoid:Q9C9L0 OMA:REMIANH
PhylomeDB:Q9C9L0 Genevestigator:Q9C9L0 Uniprot:Q9C9L0
Length = 732
Score = 207 (77.9 bits), Expect = 1.3e-38, Sum P(4) = 1.3e-38
Identities = 54/159 (33%), Positives = 84/159 (52%)
Query: 339 YNKNAHA--GIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHRK 396
YN + G L V VL TG WP+ + N LP+++ E F+ +Y R+
Sbjct: 479 YNSHPELSEGPTLVVQVLTTGSWPTQPTIQCN----LPAEVSVLCEKFRSYYLGTHTGRR 534
Query: 397 LSWIYSLGQCHINAKF-ELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLV 455
LSW ++G I A F + + EL +ST+ +L LFN S+RLSY ++ + DL
Sbjct: 535 LSWQTNMGTADIKAVFGKGQKHELNVSTFQMCVLMLFNNSDRLSYKEIEQATEIPTPDLK 594
Query: 456 RLLHSLSILYYK-ILIKEPDTKSISRSDYFELNSKFTDR 493
R L S++ + K +L KEP +K I+ D+F +N +F +
Sbjct: 595 RCLQSMACVKGKNVLRKEPMSKEIAEEDWFVVNDRFASK 633
Score = 175 (66.7 bits), Expect = 1.3e-38, Sum P(4) = 1.3e-38
Identities = 43/140 (30%), Positives = 73/140 (52%)
Query: 93 DAVIDEREREQVDRALLANVLDIFV---EHMLQD---------TSSYYSRISTNWILKDP 140
D V ER E +DR L+ NV+ +F+ E + QD ++ +Y S +I
Sbjct: 161 DLVHKERTGEVIDRVLMRNVIKMFMDLGESVYQDDFEKPFLEASAEFYKVESMEFIESCD 220
Query: 141 CPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVYATQLLEKEQSGCGALFR 200
C +Y++KAE+ L +E +RV YL + E K+ V+ E++ + +L+ E SG +
Sbjct: 221 CGEYLKKAEKPLVEEVERVVNYLDAKSEAKITSVVEREMIANHVQRLVHMENSGLVNMLL 280
Query: 201 GNKVDDLSRMYRFYRTIRAG 220
+K +D+ RMY +R + G
Sbjct: 281 NDKYEDMGRMYSLFRRVANG 300
Score = 115 (45.5 bits), Expect = 1.3e-38, Sum P(4) = 1.3e-38
Identities = 28/96 (29%), Positives = 48/96 (50%)
Query: 223 DNYMEYVTNCFMDHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSGNEKLSD 282
D Y + F + FQ AL +F+ F N S E ++ F D+ L+K G + + +
Sbjct: 341 DKYDRIINMAFNNDKTFQNALNSSFEYFVNLNT---RSPEFISLFVDDKLRK-GLKGVGE 396
Query: 283 EAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLL 318
E + Y+ +KD+F ++Y++ LA+RLL
Sbjct: 397 EDVDLILDKVMMLFRYLQEKDVFEKYYKQHLAKRLL 432
Score = 83 (34.3 bits), Expect = 1.3e-38, Sum P(4) = 1.3e-38
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLER 546
R+VL H +++E + L F KKRIE LI +D+LER
Sbjct: 678 RRVLDHNNIIAEVTKQLQTRFLANPTEIKKRIESLIERDFLER 720
Score = 43 (20.2 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 18/86 (20%), Positives = 36/86 (41%)
Query: 317 LLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVT-VLATGFWPSYKSSDLNPIFNLPS 375
+ F+ +T + FE ++ N + I L V L G D++ I +
Sbjct: 349 MAFNNDKTFQNALNSSFEYFVNLNTRSPEFISLFVDDKLRKGL-KGVGEEDVDLILDKVM 407
Query: 376 QMIKCVE---VFKRFYETKTKHRKLS 398
+ + ++ VF+++Y+ R LS
Sbjct: 408 MLFRYLQEKDVFEKYYKQHLAKRLLS 433
>UNIPROTKB|G3N0Q3 [details] [associations]
symbol:G3N0Q3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:NDYHERS EMBL:DAAA02010429
PRIDE:G3N0Q3 Ensembl:ENSBTAT00000063692 NextBio:20878225
Uniprot:G3N0Q3
Length = 767
Score = 160 (61.4 bits), Expect = 1.3e-35, Sum P(5) = 1.3e-35
Identities = 48/170 (28%), Positives = 84/170 (49%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLN 368
Y KL +R+ D + A Q F+K+L ++ +D S+ VL+ G+WP +S +
Sbjct: 491 YTSKL-QRMFQDIGVSKALNAQ--FKKHLMDSEPLD--LDFSIHVLSYGWWPFEESCTVL 545
Query: 369 PIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAI 428
LPS++ C F FY + RKLSW Y L + + + N L +ST+ AI
Sbjct: 546 ----LPSELEPCYRRFTAFYASCYSDRKLSWAYQLSEGELVTNYFKNNYTLRVSTFQMAI 601
Query: 429 LDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSILYYKILIKEPDTKSI 478
L +N + + Q++ + D + ++L L L +K+L+ E + ++
Sbjct: 602 LLQYNTEDAYTIQQLMDSTQIKMDIVAQVLQIL--LKFKLLVLEDKSANV 649
Score = 153 (58.9 bits), Expect = 1.3e-35, Sum P(5) = 1.3e-35
Identities = 40/122 (32%), Positives = 60/122 (49%)
Query: 100 EREQVDRALLANVL-DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDR 158
E Q + + + V + F L DT YY+R ST + ++P +YM+K E L +ER R
Sbjct: 206 EDNQFEESPMLTVYKEAFESQFLADTERYYTRKSTELLQQNPVTEYMKKVEALLLEERRR 265
Query: 159 VSRYLQSNGEEKLVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIR 218
YL + + KL K + L+ + L + Q+ L NK +DL RMYR I+
Sbjct: 266 ARVYLHQSSKGKLARKCRQVLVEKHLEIFLTEFQN----LLNANKSEDLGRMYRLIYRIK 321
Query: 219 AG 220
G
Sbjct: 322 NG 323
Score = 125 (49.1 bits), Expect = 1.3e-35, Sum P(5) = 1.3e-35
Identities = 39/108 (36%), Positives = 53/108 (49%)
Query: 222 HDNYMEYVTNCFMDHSLFQRALKEAFKIFCNK---TVGGFSSS---EQLATFCDNILKKS 275
H Y V + F +H+ F AL +A F N T SSS E LA +CD++LKKS
Sbjct: 365 HKKYNALVISAFRNHADFVAALDKACSGFINNNAVTKMAQSSSKSPELLAQYCDSLLKKS 424
Query: 276 GNEKLSDEA-IXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRS 322
K +EA + Y+ DKD+ +FY K LA+RL+ S
Sbjct: 425 S--KNPEEAELEDTLNHVMTVFKYMDDKDVVQKFYTKMLAKRLVHQNS 470
Score = 108 (43.1 bits), Expect = 1.3e-35, Sum P(5) = 1.3e-35
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RKV+ HQQL+ E L +FKP + KK I+ LI ++YLER + +T+
Sbjct: 713 RKVVKHQQLLGEVATQLSSVFKPQISVIKKCIDILIEKEYLERVGDEKDTY 763
Score = 76 (31.8 bits), Expect = 5.4e-08, Sum P(3) = 5.4e-08
Identities = 31/128 (24%), Positives = 57/128 (44%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWP---SYKSS 365
Y KK+ LL +R R +Q+ K R K ++ + + T F + KS
Sbjct: 251 YMKKVEALLLEERRRARVYLHQSSKGKLAR--KCRQVLVEKHLEIFLTEFQNLLNANKSE 308
Query: 366 DLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHIN-AKFELKNIELIISTY 424
DL ++ L ++ + FK+ ET ++ LS I G+ +N + ++ + I Y
Sbjct: 309 DLGRMYRLIYRIKNGLGEFKKILETHIHNQGLSAIEECGEAALNDPRMYVETVLNIHKKY 368
Query: 425 HAAILDLF 432
+A ++ F
Sbjct: 369 NALVISAF 376
Score = 67 (28.6 bits), Expect = 1.4e-25, Sum P(4) = 1.4e-25
Identities = 31/150 (20%), Positives = 68/150 (45%)
Query: 38 EEYMALHITIYNMCSQ-NTPNNNSASCKRRNIPGFDEFGLACFRDLVYDALKHKAKDAVI 96
E+Y + +C++ N NS + + N+ + +RD ++ L + +AV+
Sbjct: 116 EDYQFSSKVLNGICARLNKHLLNSTNNEGHNVCEIYSLAMVTWRDCLFRPLNKQVTNAVL 175
Query: 97 D--ERER--EQVDRALLANVLDIFVEHMLQDTSSY--------YSRISTNWILKDPCPDY 144
E+ER E ++ L++ + ++E + + + + Y + L D Y
Sbjct: 176 KLIEKERNGESINTRLISGAIQSYLELGVNEDNQFEESPMLTVYKEAFESQFLADTERYY 235
Query: 145 MRKAEECLKKERDRVSRYLQSNGEEKLVEK 174
RK+ E L +++ V+ Y++ E L+E+
Sbjct: 236 TRKSTELL--QQNPVTEYMKKV-EALLLEE 262
Score = 50 (22.7 bits), Expect = 1.3e-35, Sum P(5) = 1.3e-35
Identities = 16/59 (27%), Positives = 28/59 (47%)
Query: 10 DEGWEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMCSQNTPNNNSASCKRRNI 68
DE W+ I+ GI ++ R+ S Y+ L+ +YN C +P + S K + +
Sbjct: 18 DELWDNIRAGIQQVYA-----RQSMVKSR-YIELYTLLYNHCLYVSPQAQTQSKKGQKL 70
Score = 40 (19.1 bits), Expect = 7.6e-23, Sum P(4) = 7.6e-23
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 16 IQKGIGKLKRILE 28
I+ G+G+ K+ILE
Sbjct: 320 IKNGLGEFKKILE 332
>ZFIN|ZDB-GENE-040426-1357 [details] [associations]
symbol:cul4a "cullin 4A" species:7955 "Danio
rerio" [GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0071600 "otic vesicle morphogenesis"
evidence=IMP] [GO:0035118 "embryonic pectoral fin morphogenesis"
evidence=IMP] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS50069 SMART:SM00182 ZFIN:ZDB-GENE-040426-1357
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GO:GO:0035118 KO:K10609 HOVERGEN:HBG003619 CTD:8451 GO:GO:0071600
EMBL:BC054607 IPI:IPI00487530 RefSeq:NP_957321.1 UniGene:Dr.84245
ProteinModelPortal:Q7T2C1 SMR:Q7T2C1 STRING:Q7T2C1 GeneID:394002
KEGG:dre:394002 NextBio:20814969 Uniprot:Q7T2C1
Length = 635
Score = 213 (80.0 bits), Expect = 6.1e-35, Sum P(3) = 6.1e-35
Identities = 48/146 (32%), Positives = 80/146 (54%)
Query: 333 FEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKT 392
F++Y++ N+ + I+L+V +L G+WPSY D++ LP++M+K EVFK FY K
Sbjct: 493 FKQYMQ-NQTEPSNIELTVNILTMGYWPSYTPMDVH----LPAEMVKLQEVFKLFYLGKH 547
Query: 393 KHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHD 452
RKL W +LG + +F+ EL +S + +L +FN S+ S ++ +
Sbjct: 548 SGRKLQWQPTLGHAVLKTEFKEGKKELQVSLFQTLVLLMFNESDECSVEEIRVATGIEEG 607
Query: 453 DLVRLLHSLSILYYKILIKEPDTKSI 478
+L R L SL+ ++L K P K +
Sbjct: 608 ELKRTLQSLACGKARVLNKTPRGKEV 633
Score = 154 (59.3 bits), Expect = 6.1e-35, Sum P(3) = 6.1e-35
Identities = 47/169 (27%), Positives = 85/169 (50%)
Query: 68 IPGFDEFGLACFRD-LVYDA-LKHKAKDAVID--ERER--EQVDRALLANVL-------- 113
+P + GL FR +V DA ++ + +++ ERER E VDR+LL ++L
Sbjct: 152 LPSIWDTGLELFRTHIVSDAAVQSRTVQGILEQVERERSGETVDRSLLRSLLGMLSDLQV 211
Query: 114 --DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKL 171
D F + L +T+ Y+ + + P+Y+ L++E DRV YL + ++ L
Sbjct: 212 YKDSFEQRFLSETTRLYAAEGQRLMQERDVPEYLHHVARRLEEENDRVISYLDQSTQKPL 271
Query: 172 VEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG 220
+ V+ +LL + T +L+K G L N+V +L+ +Y + ++ G
Sbjct: 272 IATVEKQLLGEHMTTILQK---GLRTLLDENRVCELTLLYELFSKVKGG 317
Score = 134 (52.2 bits), Expect = 6.1e-35, Sum P(3) = 6.1e-35
Identities = 35/106 (33%), Positives = 60/106 (56%)
Query: 226 MEYVT-NCFMDHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSGNEKLSDEA 284
M+ VT +CF + F A+KEAF+ F N+ +E +A + D+ L+ +GN++ ++E
Sbjct: 357 MDSVTQSCFQRNESFINAMKEAFENFINQRPN--KPAELIAKYVDSKLR-AGNKEATEEE 413
Query: 285 IXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRSRTL-ARKN 329
+ +I KD+F FY+K LA+RLL +S ++ A K+
Sbjct: 414 LERILDKIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKS 459
>UNIPROTKB|E1BYQ3 [details] [associations]
symbol:CUL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0000090 "mitotic anaphase" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0001831
"trophectodermal cellular morphogenesis" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005827 "polar microtubule" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0007229 "integrin-mediated
signaling pathway" evidence=IEA] [GO:0007369 "gastrulation"
evidence=IEA] [GO:0008054 "cyclin catabolic process" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0016477 "cell migration" evidence=IEA] [GO:0017145 "stem cell
division" evidence=IEA] [GO:0030332 "cyclin binding" evidence=IEA]
[GO:0031463 "Cul3-RING ubiquitin ligase complex" evidence=IEA]
[GO:0035024 "negative regulation of Rho protein signal
transduction" evidence=IEA] [GO:0040016 "embryonic cleavage"
evidence=IEA] [GO:0043149 "stress fiber assembly" evidence=IEA]
[GO:0048208 "COPII vesicle coating" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0005634
GO:GO:0005794 GO:GO:0016477 GO:GO:0000090 GO:GO:0016055
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000910 GO:GO:0007229
GO:GO:0035024 GO:GO:0004842 GO:GO:0008054 SUPFAM:SSF75632
GO:GO:0043149 GO:GO:0031463 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0005827
OMA:ATFYGPI GO:GO:0048208 GO:GO:0017145 EMBL:AADN02024135
IPI:IPI00576031 Ensembl:ENSGALT00000008191 Uniprot:E1BYQ3
Length = 746
Score = 132 (51.5 bits), Expect = 1.7e-34, Sum P(5) = 1.7e-34
Identities = 28/92 (30%), Positives = 49/92 (53%)
Query: 321 RSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKC 380
R +++ F ++L+ + G+DL+V VL TG+WP+ ++ P N+P
Sbjct: 453 RDMSISNTTMDEFRQHLQSTGVSLGGVDLTVRVLTTGYWPTQSAT---PKCNIPPAPRHA 509
Query: 381 VEVFKRFYETKTKHRKLSWIYSLGQCHINAKF 412
E+F+RFY K R+L+ + +G +NA F
Sbjct: 510 FEIFRRFYLAKHSGRQLTLQHHMGSADLNATF 541
Score = 132 (51.5 bits), Expect = 1.7e-34, Sum P(5) = 1.7e-34
Identities = 37/153 (24%), Positives = 73/153 (47%)
Query: 83 VYDALKHKAKDAVIDEREREQVDRALLAN------VLDI---------FVEHMLQDTSSY 127
+ D L+ D + ER+ E VDR + N +L + F L+ ++ +
Sbjct: 135 IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEF 194
Query: 128 YSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVYATQL 187
+ S ++ ++ Y++K E + +E +RV L + EE +V+ V+ EL+ + +
Sbjct: 195 FQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTI 254
Query: 188 LEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG 220
+E E SG + + K +DL+ MY+ + + G
Sbjct: 255 VEMENSGLVHMLKNGKTEDLACMYKLFSRVPNG 287
Score = 112 (44.5 bits), Expect = 1.7e-34, Sum P(5) = 1.7e-34
Identities = 27/94 (28%), Positives = 49/94 (52%)
Query: 403 LGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLS 462
+G + K+I L +ST+ IL LFN + ++ ++ + ++ +LVR L SL+
Sbjct: 555 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 613
Query: 463 I--LYYKILIKEPDTKSISRSDYFELNSKFTDRM 494
++L KEP +K I F +N +FT ++
Sbjct: 614 CGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKL 647
Score = 110 (43.8 bits), Expect = 1.7e-34, Sum P(5) = 1.7e-34
Identities = 33/114 (28%), Positives = 56/114 (49%)
Query: 220 GPHDNYMEYVTNCFMDHSLFQRALKEAF---KIFCNKTVGGFS--------SSEQLATFC 268
G N ++Y+ S F R L+E+F ++F G F S E L+ F
Sbjct: 311 GEGKNPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFI 370
Query: 269 DNILKKSGNEKLSDEAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRS 322
D+ LKK G + L+++ + ++ +KD+F +Y++ LARRLL ++S
Sbjct: 371 DDKLKK-GVKGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKS 423
Score = 102 (41.0 bits), Expect = 1.7e-34, Sum P(5) = 1.7e-34
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK + H LV+E + L F P+ KKRIEGLI ++YL R PE+ +
Sbjct: 692 RKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVY 742
>UNIPROTKB|F1PU58 [details] [associations]
symbol:CUL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048208 "COPII vesicle coating" evidence=IEA]
[GO:0043149 "stress fiber assembly" evidence=IEA] [GO:0040016
"embryonic cleavage" evidence=IEA] [GO:0035024 "negative regulation
of Rho protein signal transduction" evidence=IEA] [GO:0031463
"Cul3-RING ubiquitin ligase complex" evidence=IEA] [GO:0030332
"cyclin binding" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0008054 "cyclin catabolic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007229 "integrin-mediated
signaling pathway" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0005827 "polar microtubule"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0001831 "trophectodermal
cellular morphogenesis" evidence=IEA] [GO:0000910 "cytokinesis"
evidence=IEA] [GO:0000090 "mitotic anaphase" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0005634
GO:GO:0005794 GO:GO:0016477 GO:GO:0000090 GO:GO:0016055
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016 GO:GO:0000910
GO:GO:0007229 GO:GO:0035024 GO:GO:0004842 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0007369 GO:GO:0043149 GO:GO:0031463
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 GO:GO:0005827 OMA:ATFYGPI
GO:GO:0048208 GO:GO:0017145 GO:GO:0001831 EMBL:AAEX03014406
ProteinModelPortal:F1PU58 Ensembl:ENSCAFT00000016275 Uniprot:F1PU58
Length = 750
Score = 132 (51.5 bits), Expect = 1.8e-34, Sum P(5) = 1.8e-34
Identities = 28/92 (30%), Positives = 49/92 (53%)
Query: 321 RSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKC 380
R +++ F ++L+ + G+DL+V VL TG+WP+ ++ P N+P
Sbjct: 457 RDMSISNTTMDEFRQHLQATGVSLGGVDLTVRVLTTGYWPTQSAT---PKCNIPPAPRHA 513
Query: 381 VEVFKRFYETKTKHRKLSWIYSLGQCHINAKF 412
E+F+RFY K R+L+ + +G +NA F
Sbjct: 514 FEIFRRFYLAKHSGRQLTLQHHMGSADLNATF 545
Score = 132 (51.5 bits), Expect = 1.8e-34, Sum P(5) = 1.8e-34
Identities = 37/153 (24%), Positives = 73/153 (47%)
Query: 83 VYDALKHKAKDAVIDEREREQVDRALLAN------VLDI---------FVEHMLQDTSSY 127
+ D L+ D + ER+ E VDR + N +L + F L+ ++ +
Sbjct: 139 IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEF 198
Query: 128 YSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVYATQL 187
+ S ++ ++ Y++K E + +E +RV L + EE +V+ V+ EL+ + +
Sbjct: 199 FQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTI 258
Query: 188 LEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG 220
+E E SG + + K +DL+ MY+ + + G
Sbjct: 259 VEMENSGLVHMLKNGKTEDLACMYKLFSRVPNG 291
Score = 112 (44.5 bits), Expect = 1.8e-34, Sum P(5) = 1.8e-34
Identities = 27/94 (28%), Positives = 49/94 (52%)
Query: 403 LGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLS 462
+G + K+I L +ST+ IL LFN + ++ ++ + ++ +LVR L SL+
Sbjct: 559 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 617
Query: 463 I--LYYKILIKEPDTKSISRSDYFELNSKFTDRM 494
++L KEP +K I F +N +FT ++
Sbjct: 618 CGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKL 651
Score = 110 (43.8 bits), Expect = 1.8e-34, Sum P(5) = 1.8e-34
Identities = 33/114 (28%), Positives = 56/114 (49%)
Query: 220 GPHDNYMEYVTNCFMDHSLFQRALKEAF---KIFCNKTVGGFS--------SSEQLATFC 268
G N ++Y+ S F R L+E+F ++F G F S E L+ F
Sbjct: 315 GEGKNPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFI 374
Query: 269 DNILKKSGNEKLSDEAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRS 322
D+ LKK G + L+++ + ++ +KD+F +Y++ LARRLL ++S
Sbjct: 375 DDKLKK-GVKGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKS 427
Score = 102 (41.0 bits), Expect = 1.8e-34, Sum P(5) = 1.8e-34
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK + H LV+E + L F P+ KKRIEGLI ++YL R PE+ +
Sbjct: 696 RKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVY 746
>UNIPROTKB|Q6GPF3 [details] [associations]
symbol:cul3b "Cullin-3-B" species:8355 "Xenopus laevis"
[GO:0000090 "mitotic anaphase" evidence=ISS] [GO:0000910
"cytokinesis" evidence=ISS] [GO:0005827 "polar microtubule"
evidence=ISS] [GO:0006513 "protein monoubiquitination"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0007229 "integrin-mediated signaling pathway"
evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0017145
"stem cell division" evidence=ISS] [GO:0031463 "Cul3-RING ubiquitin
ligase complex" evidence=ISS] [GO:0035024 "negative regulation of
Rho protein signal transduction" evidence=ISS] [GO:0040016
"embryonic cleavage" evidence=ISS] [GO:0043149 "stress fiber
assembly" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048208 "COPII vesicle coating" evidence=ISS] [GO:0051322
"anaphase" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0043161 GO:GO:0016477
GO:GO:0000090 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016
GO:GO:0000910 GO:GO:0007229 GO:GO:0035024 SUPFAM:SSF75632
GO:GO:0043149 GO:GO:0031463 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0005827 HSSP:Q9JLV5 KO:K03869 GO:GO:0048208
GO:GO:0017145 EMBL:BC073186 RefSeq:NP_001085677.1 UniGene:Xl.71281
ProteinModelPortal:Q6GPF3 SMR:Q6GPF3 PRIDE:Q6GPF3 GeneID:444103
KEGG:xla:444103 CTD:444103 Xenbase:XB-GENE-6256683 Uniprot:Q6GPF3
Length = 768
Score = 133 (51.9 bits), Expect = 2.0e-34, Sum P(5) = 2.0e-34
Identities = 28/92 (30%), Positives = 49/92 (53%)
Query: 321 RSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKC 380
R +++ F ++L+ + G+DL+V VL TG+WP+ ++ P N+P
Sbjct: 475 RDMSISNTTMDEFRQHLQTTGVSLGGVDLTVRVLTTGYWPTQSAT---PKCNIPPSPRHA 531
Query: 381 VEVFKRFYETKTKHRKLSWIYSLGQCHINAKF 412
E+F+RFY K R+L+ + +G +NA F
Sbjct: 532 FEIFRRFYLAKHSGRQLTLQHHMGSADLNATF 563
Score = 132 (51.5 bits), Expect = 2.0e-34, Sum P(5) = 2.0e-34
Identities = 37/153 (24%), Positives = 73/153 (47%)
Query: 83 VYDALKHKAKDAVIDEREREQVDRALLAN------VLDI---------FVEHMLQDTSSY 127
+ D L+ D + ER+ E VDR + N +L + F L+ ++ +
Sbjct: 157 IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEF 216
Query: 128 YSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVYATQL 187
+ S ++ ++ Y++K E + +E +RV L + EE +V+ V+ EL+ + +
Sbjct: 217 FQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTI 276
Query: 188 LEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG 220
+E E SG + + K +DL+ MY+ + + G
Sbjct: 277 VEMENSGLVHMLKNGKTEDLACMYKLFSRVPNG 309
Score = 111 (44.1 bits), Expect = 2.0e-34, Sum P(5) = 2.0e-34
Identities = 27/94 (28%), Positives = 49/94 (52%)
Query: 403 LGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLS 462
+G + K+I L +ST+ IL LFN + ++ ++ + ++ +LVR L SL+
Sbjct: 577 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 635
Query: 463 I--LYYKILIKEPDTKSISRSDYFELNSKFTDRM 494
++L KEP +K I F +N +FT ++
Sbjct: 636 CGKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKL 669
Score = 110 (43.8 bits), Expect = 2.0e-34, Sum P(5) = 2.0e-34
Identities = 33/114 (28%), Positives = 56/114 (49%)
Query: 220 GPHDNYMEYVTNCFMDHSLFQRALKEAF---KIFCNKTVGGFS--------SSEQLATFC 268
G N ++Y+ S F R L+E+F ++F G F S E L+ F
Sbjct: 333 GEGKNPVDYIQGLLDLKSRFDRFLQESFSNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFI 392
Query: 269 DNILKKSGNEKLSDEAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRS 322
D+ LKK G + L+++ + ++ +KD+F +Y++ LARRLL ++S
Sbjct: 393 DDKLKK-GVKGLTEQEVESILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKS 445
Score = 102 (41.0 bits), Expect = 2.0e-34, Sum P(5) = 2.0e-34
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK + H LV+E + L F P+ KKRIEGLI ++YL R PE+ +
Sbjct: 714 RKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVY 764
>UNIPROTKB|E1BIN5 [details] [associations]
symbol:CUL3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048208 "COPII vesicle coating" evidence=IEA]
[GO:0043149 "stress fiber assembly" evidence=IEA] [GO:0040016
"embryonic cleavage" evidence=IEA] [GO:0035024 "negative regulation
of Rho protein signal transduction" evidence=IEA] [GO:0031463
"Cul3-RING ubiquitin ligase complex" evidence=IEA] [GO:0030332
"cyclin binding" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0008054 "cyclin catabolic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007229 "integrin-mediated
signaling pathway" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0005827 "polar microtubule"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0001831 "trophectodermal
cellular morphogenesis" evidence=IEA] [GO:0000910 "cytokinesis"
evidence=IEA] [GO:0000090 "mitotic anaphase" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0005634
GO:GO:0005794 GO:GO:0016477 GO:GO:0000090 GO:GO:0016055
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016 GO:GO:0000910
GO:GO:0007229 GO:GO:0035024 GO:GO:0004842 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0007369 GO:GO:0043149 GO:GO:0031463
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 GO:GO:0005827 KO:K03869 OMA:ATFYGPI
GO:GO:0048208 GO:GO:0017145 CTD:8452 GO:GO:0001831
EMBL:DAAA02006055 EMBL:DAAA02006056 EMBL:DAAA02006057
EMBL:DAAA02006058 EMBL:DAAA02006059 IPI:IPI00712202
RefSeq:NP_001179735.1 UniGene:Bt.64031 PRIDE:E1BIN5
Ensembl:ENSBTAT00000029018 GeneID:534325 KEGG:bta:534325
NextBio:20876357 Uniprot:E1BIN5
Length = 768
Score = 132 (51.5 bits), Expect = 2.0e-34, Sum P(5) = 2.0e-34
Identities = 28/92 (30%), Positives = 49/92 (53%)
Query: 321 RSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKC 380
R +++ F ++L+ + G+DL+V VL TG+WP+ ++ P N+P
Sbjct: 475 RDMSISNTTMDEFRQHLQATGVSLGGVDLTVRVLTTGYWPTQSAT---PKCNIPPAPRHA 531
Query: 381 VEVFKRFYETKTKHRKLSWIYSLGQCHINAKF 412
E+F+RFY K R+L+ + +G +NA F
Sbjct: 532 FEIFRRFYLAKHSGRQLTLQHHMGSADLNATF 563
Score = 132 (51.5 bits), Expect = 2.0e-34, Sum P(5) = 2.0e-34
Identities = 37/153 (24%), Positives = 73/153 (47%)
Query: 83 VYDALKHKAKDAVIDEREREQVDRALLAN------VLDI---------FVEHMLQDTSSY 127
+ D L+ D + ER+ E VDR + N +L + F L+ ++ +
Sbjct: 157 IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEF 216
Query: 128 YSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVYATQL 187
+ S ++ ++ Y++K E + +E +RV L + EE +V+ V+ EL+ + +
Sbjct: 217 FQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTI 276
Query: 188 LEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG 220
+E E SG + + K +DL+ MY+ + + G
Sbjct: 277 VEMENSGLVHMLKNGKTEDLACMYKLFSRVPNG 309
Score = 112 (44.5 bits), Expect = 2.0e-34, Sum P(5) = 2.0e-34
Identities = 27/94 (28%), Positives = 49/94 (52%)
Query: 403 LGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLS 462
+G + K+I L +ST+ IL LFN + ++ ++ + ++ +LVR L SL+
Sbjct: 577 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 635
Query: 463 I--LYYKILIKEPDTKSISRSDYFELNSKFTDRM 494
++L KEP +K I F +N +FT ++
Sbjct: 636 CGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKL 669
Score = 110 (43.8 bits), Expect = 2.0e-34, Sum P(5) = 2.0e-34
Identities = 33/114 (28%), Positives = 56/114 (49%)
Query: 220 GPHDNYMEYVTNCFMDHSLFQRALKEAF---KIFCNKTVGGFS--------SSEQLATFC 268
G N ++Y+ S F R L+E+F ++F G F S E L+ F
Sbjct: 333 GEGKNPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFI 392
Query: 269 DNILKKSGNEKLSDEAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRS 322
D+ LKK G + L+++ + ++ +KD+F +Y++ LARRLL ++S
Sbjct: 393 DDKLKK-GVKGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKS 445
Score = 102 (41.0 bits), Expect = 2.0e-34, Sum P(5) = 2.0e-34
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK + H LV+E + L F P+ KKRIEGLI ++YL R PE+ +
Sbjct: 714 RKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVY 764
>UNIPROTKB|Q6DE95 [details] [associations]
symbol:cul3a "Cullin-3-A" species:8355 "Xenopus laevis"
[GO:0000090 "mitotic anaphase" evidence=ISS] [GO:0000910
"cytokinesis" evidence=ISS] [GO:0005827 "polar microtubule"
evidence=ISS] [GO:0006513 "protein monoubiquitination"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0007229 "integrin-mediated signaling pathway"
evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0017145
"stem cell division" evidence=ISS] [GO:0031463 "Cul3-RING ubiquitin
ligase complex" evidence=ISS] [GO:0035024 "negative regulation of
Rho protein signal transduction" evidence=ISS] [GO:0040016
"embryonic cleavage" evidence=ISS] [GO:0043149 "stress fiber
assembly" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048208 "COPII vesicle coating" evidence=ISS] [GO:0051322
"anaphase" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0043161 GO:GO:0016477
GO:GO:0000090 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016
GO:GO:0000910 GO:GO:0007229 GO:GO:0035024 SUPFAM:SSF75632
GO:GO:0043149 GO:GO:0031463 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0005827 HSSP:Q9JLV5 KO:K03869 EMBL:BC077239
RefSeq:NP_001086652.1 UniGene:Xl.48191 ProteinModelPortal:Q6DE95
SMR:Q6DE95 PRIDE:Q6DE95 GeneID:446487 KEGG:xla:446487 CTD:446487
Xenbase:XB-GENE-974989 GO:GO:0048208 GO:GO:0017145 Uniprot:Q6DE95
Length = 768
Score = 132 (51.5 bits), Expect = 2.0e-34, Sum P(5) = 2.0e-34
Identities = 28/92 (30%), Positives = 49/92 (53%)
Query: 321 RSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKC 380
R +++ F ++L+ + G+DL+V VL TG+WP+ ++ P N+P
Sbjct: 475 RDMSISNTTMDEFRQHLQTTGVSLGGVDLTVRVLTTGYWPTQSAT---PKCNIPPAPRHA 531
Query: 381 VEVFKRFYETKTKHRKLSWIYSLGQCHINAKF 412
E+F+RFY K R+L+ + +G +NA F
Sbjct: 532 FEIFRRFYLAKHSGRQLTLQHHMGSADLNATF 563
Score = 132 (51.5 bits), Expect = 2.0e-34, Sum P(5) = 2.0e-34
Identities = 37/153 (24%), Positives = 73/153 (47%)
Query: 83 VYDALKHKAKDAVIDEREREQVDRALLAN------VLDI---------FVEHMLQDTSSY 127
+ D L+ D + ER+ E VDR + N +L + F L+ ++ +
Sbjct: 157 IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEF 216
Query: 128 YSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVYATQL 187
+ S ++ ++ Y++K E + +E +RV L + EE +V+ V+ EL+ + +
Sbjct: 217 FQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTI 276
Query: 188 LEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG 220
+E E SG + + K +DL+ MY+ + + G
Sbjct: 277 VEMENSGLVHMLKNGKTEDLACMYKLFSRVPNG 309
Score = 112 (44.5 bits), Expect = 2.0e-34, Sum P(5) = 2.0e-34
Identities = 27/94 (28%), Positives = 50/94 (53%)
Query: 403 LGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLS 462
+G + K+I L +ST+ IL LFN ++ ++ ++ + ++ +LVR L SL+
Sbjct: 577 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNRDKYTFEEIQQETDIPERELVRALQSLA 635
Query: 463 I--LYYKILIKEPDTKSISRSDYFELNSKFTDRM 494
++L KEP +K I F +N +FT ++
Sbjct: 636 CGKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKL 669
Score = 110 (43.8 bits), Expect = 2.0e-34, Sum P(5) = 2.0e-34
Identities = 33/114 (28%), Positives = 56/114 (49%)
Query: 220 GPHDNYMEYVTNCFMDHSLFQRALKEAF---KIFCNKTVGGFS--------SSEQLATFC 268
G N ++Y+ S F R L+E+F ++F G F S E L+ F
Sbjct: 333 GEGKNPVDYIQGLLDLKSRFDRFLQESFSNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFI 392
Query: 269 DNILKKSGNEKLSDEAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRS 322
D+ LKK G + L+++ + ++ +KD+F +Y++ LARRLL ++S
Sbjct: 393 DDKLKK-GVKGLTEQEVESILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKS 445
Score = 102 (41.0 bits), Expect = 2.0e-34, Sum P(5) = 2.0e-34
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK + H LV+E + L F P+ KKRIEGLI ++YL R PE+ +
Sbjct: 714 RKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVY 764
>ZFIN|ZDB-GENE-030131-3376 [details] [associations]
symbol:cul3a "cullin 3a" species:7955 "Danio
rerio" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-030131-3376 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 KO:K03869 HOVERGEN:HBG003619 EMBL:AY423034
IPI:IPI00921732 RefSeq:NP_955985.1 UniGene:Dr.75956
ProteinModelPortal:Q6TEL5 SMR:Q6TEL5 STRING:Q6TEL5 GeneID:324655
KEGG:dre:324655 CTD:324655 InParanoid:Q6TEL5 NextBio:20808899
ArrayExpress:Q6TEL5 Uniprot:Q6TEL5
Length = 766
Score = 136 (52.9 bits), Expect = 2.2e-34, Sum P(5) = 2.2e-34
Identities = 29/92 (31%), Positives = 50/92 (54%)
Query: 321 RSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKC 380
R +++ F +L+ ++ + G+DL+V VL TG+WP+ ++ P N+P
Sbjct: 473 RDMSISNTTMDEFRHHLQTSQVSLCGVDLTVRVLTTGYWPTQSAT---PKCNIPPSPRHA 529
Query: 381 VEVFKRFYETKTKHRKLSWIYSLGQCHINAKF 412
EVF+RFY K R+L+ + +G +NA F
Sbjct: 530 FEVFRRFYLAKHSGRQLTLQHHMGSADLNATF 561
Score = 129 (50.5 bits), Expect = 2.2e-34, Sum P(5) = 2.2e-34
Identities = 38/153 (24%), Positives = 73/153 (47%)
Query: 83 VYDALKHKAKDAVIDEREREQVDRALLAN------VL-----DIFVEHM----LQDTSSY 127
+ D L+ D + ER+ E VDR + N VL ++ E L ++ +
Sbjct: 155 IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMVLGLKGRSVYEEDFEIPFLDMSAEF 214
Query: 128 YSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVYATQL 187
+ S ++ ++ Y++K E + +E +RV L + EE +V+ V+ EL+ + +
Sbjct: 215 FQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTI 274
Query: 188 LEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG 220
+E E SG + + K +DL+ MY+ + + G
Sbjct: 275 VEMENSGLVHMLKNGKTEDLACMYKLFGRVPNG 307
Score = 110 (43.8 bits), Expect = 2.2e-34, Sum P(5) = 2.2e-34
Identities = 26/82 (31%), Positives = 46/82 (56%)
Query: 415 KNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSI--LYYKILIKE 472
K+I L +ST+ IL LFN + ++ ++ + ++ +LVR L SL+ ++L KE
Sbjct: 587 KHI-LQVSTFQMTILMLFNNREKFTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKE 645
Query: 473 PDTKSISRSDYFELNSKFTDRM 494
P +K I F +N +FT ++
Sbjct: 646 PKSKEIESGHVFTVNDQFTSKL 667
Score = 110 (43.8 bits), Expect = 2.2e-34, Sum P(5) = 2.2e-34
Identities = 33/114 (28%), Positives = 56/114 (49%)
Query: 220 GPHDNYMEYVTNCFMDHSLFQRALKEAF---KIFCNKTVGGFS--------SSEQLATFC 268
G N ++Y+ S F R L+E+F ++F G F S E L+ F
Sbjct: 331 GEGKNPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFI 390
Query: 269 DNILKKSGNEKLSDEAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRS 322
D+ LKK G + L+++ + ++ +KD+F +Y++ LARRLL ++S
Sbjct: 391 DDKLKK-GVKGLTEQEVESILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKS 443
Score = 102 (41.0 bits), Expect = 2.2e-34, Sum P(5) = 2.2e-34
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK + H LV+E + L F P+ KKRIEGLI ++YL R PE+ +
Sbjct: 712 RKKMQHNVLVAEVTQQLRARFLPSPVVIKKRIEGLIEREYLARTPEDRKVY 762
>UNIPROTKB|A4IHP4 [details] [associations]
symbol:cul3 "Cullin-3" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0000090 "mitotic anaphase" evidence=ISS]
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0005827 "polar
microtubule" evidence=ISS] [GO:0006513 "protein monoubiquitination"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0007229 "integrin-mediated signaling pathway"
evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0017145
"stem cell division" evidence=ISS] [GO:0031463 "Cul3-RING ubiquitin
ligase complex" evidence=ISS] [GO:0035024 "negative regulation of
Rho protein signal transduction" evidence=ISS] [GO:0040016
"embryonic cleavage" evidence=ISS] [GO:0043149 "stress fiber
assembly" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048208 "COPII vesicle coating" evidence=ISS] [GO:0051322
"anaphase" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0043161 GO:GO:0016477
GO:GO:0000090 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016
GO:GO:0000910 GO:GO:0007229 GO:GO:0035024 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0043149 GO:GO:0031463 GO:GO:0006513
InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0005827
HOGENOM:HOG000176712 KO:K03869 GO:GO:0048208 GO:GO:0017145 CTD:8452
OrthoDB:EOG4JWVCW EMBL:BC135616 RefSeq:NP_001015975.2
UniGene:Str.1179 ProteinModelPortal:A4IHP4 SMR:A4IHP4 STRING:A4IHP4
GeneID:548729 KEGG:xtr:548729 Xenbase:XB-GENE-974982 Bgee:A4IHP4
Uniprot:A4IHP4
Length = 768
Score = 132 (51.5 bits), Expect = 2.6e-34, Sum P(5) = 2.6e-34
Identities = 28/92 (30%), Positives = 49/92 (53%)
Query: 321 RSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKC 380
R +++ F ++L+ + G+DL+V VL TG+WP+ ++ P N+P
Sbjct: 475 RDMSISNTTMDEFRQHLQTTGVSLGGVDLTVRVLTTGYWPTQSAT---PKCNIPPAPRHA 531
Query: 381 VEVFKRFYETKTKHRKLSWIYSLGQCHINAKF 412
E+F+RFY K R+L+ + +G +NA F
Sbjct: 532 FEIFRRFYLAKHSGRQLTLQHHMGSADLNATF 563
Score = 132 (51.5 bits), Expect = 2.6e-34, Sum P(5) = 2.6e-34
Identities = 37/153 (24%), Positives = 73/153 (47%)
Query: 83 VYDALKHKAKDAVIDEREREQVDRALLAN------VLDI---------FVEHMLQDTSSY 127
+ D L+ D + ER+ E VDR + N +L + F L+ ++ +
Sbjct: 157 IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEF 216
Query: 128 YSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVYATQL 187
+ S ++ ++ Y++K E + +E +RV L + EE +V+ V+ EL+ + +
Sbjct: 217 FQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTI 276
Query: 188 LEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG 220
+E E SG + + K +DL+ MY+ + + G
Sbjct: 277 VEMENSGLVHMLKNGKTEDLACMYKLFSRVPNG 309
Score = 111 (44.1 bits), Expect = 2.6e-34, Sum P(5) = 2.6e-34
Identities = 27/94 (28%), Positives = 49/94 (52%)
Query: 403 LGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLS 462
+G + K+I L +ST+ IL LFN + ++ ++ + ++ +LVR L SL+
Sbjct: 577 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 635
Query: 463 I--LYYKILIKEPDTKSISRSDYFELNSKFTDRM 494
++L KEP +K I F +N +FT ++
Sbjct: 636 CGKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKL 669
Score = 110 (43.8 bits), Expect = 2.6e-34, Sum P(5) = 2.6e-34
Identities = 33/114 (28%), Positives = 56/114 (49%)
Query: 220 GPHDNYMEYVTNCFMDHSLFQRALKEAF---KIFCNKTVGGFS--------SSEQLATFC 268
G N ++Y+ S F R L+E+F ++F G F S E L+ F
Sbjct: 333 GEGKNPVDYIQGLLDLKSRFDRFLQESFSNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFI 392
Query: 269 DNILKKSGNEKLSDEAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRS 322
D+ LKK G + L+++ + ++ +KD+F +Y++ LARRLL ++S
Sbjct: 393 DDKLKK-GVKGLTEQEVESILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKS 445
Score = 102 (41.0 bits), Expect = 2.6e-34, Sum P(5) = 2.6e-34
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK + H LV+E + L F P+ KKRIEGLI ++YL R PE+ +
Sbjct: 714 RKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVY 764
>MGI|MGI:1347360 [details] [associations]
symbol:Cul3 "cullin 3" species:10090 "Mus musculus"
[GO:0000090 "mitotic anaphase" evidence=ISO] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0000902 "cell morphogenesis"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=ISO] [GO:0001701
"in utero embryonic development" evidence=IMP] [GO:0001831
"trophectodermal cellular morphogenesis" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0005827 "polar microtubule" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006513 "protein monoubiquitination" evidence=ISO] [GO:0006810
"transport" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=ISO] [GO:0007229 "integrin-mediated signaling
pathway" evidence=IMP] [GO:0007369 "gastrulation" evidence=IMP]
[GO:0008054 "cyclin catabolic process" evidence=ISS] [GO:0016055
"Wnt receptor signaling pathway" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0016477 "cell
migration" evidence=ISO] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0017145 "stem cell division" evidence=IMP]
[GO:0030332 "cyclin binding" evidence=IPI] [GO:0031208 "POZ domain
binding" evidence=ISO] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031463 "Cul3-RING ubiquitin ligase
complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0032467 "positive regulation of
cytokinesis" evidence=ISO] [GO:0035024 "negative regulation of Rho
protein signal transduction" evidence=ISO] [GO:0040016 "embryonic
cleavage" evidence=IMP] [GO:0043149 "stress fiber assembly"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0048208 "COPII vesicle
coating" evidence=ISO] [GO:0051322 "anaphase" evidence=ISO]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
MGI:MGI:1347360 GO:GO:0005634 GO:GO:0005794 GO:GO:0016477
GO:GO:0000090 GO:GO:0016055 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0040016 GO:GO:0000910 GO:GO:0007229 GO:GO:0035024
GO:GO:0004842 eggNOG:COG5647 GO:GO:0008054 SUPFAM:SSF75632
GO:GO:0007369 GO:GO:0043149 GO:GO:0031463 GO:GO:0006513
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
GO:GO:0005827 KO:K03869 OMA:ATFYGPI GO:GO:0048208 GO:GO:0017145
CTD:8452 HOVERGEN:HBG003619 OrthoDB:EOG4JWVCW ChiTaRS:CUL3
GO:GO:0001831 EMBL:AF129738 EMBL:BC027304 IPI:IPI00467383
RefSeq:NP_057925.1 UniGene:Mm.12665 PDB:1IUY PDBsum:1IUY
ProteinModelPortal:Q9JLV5 SMR:Q9JLV5 IntAct:Q9JLV5 STRING:Q9JLV5
PhosphoSite:Q9JLV5 PaxDb:Q9JLV5 PRIDE:Q9JLV5
Ensembl:ENSMUST00000163119 GeneID:26554 KEGG:mmu:26554
InParanoid:Q9JLV5 EvolutionaryTrace:Q9JLV5 NextBio:304599
Bgee:Q9JLV5 CleanEx:MM_CUL3 Genevestigator:Q9JLV5
GermOnline:ENSMUSG00000004364 Uniprot:Q9JLV5
Length = 768
Score = 132 (51.5 bits), Expect = 2.6e-34, Sum P(5) = 2.6e-34
Identities = 28/92 (30%), Positives = 49/92 (53%)
Query: 321 RSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKC 380
R +++ F ++L+ + G+DL+V VL TG+WP+ ++ P N+P
Sbjct: 475 RDMSISNTTMDEFRQHLQATGVSLGGVDLTVRVLTTGYWPTQSAT---PKCNIPPAPRHA 531
Query: 381 VEVFKRFYETKTKHRKLSWIYSLGQCHINAKF 412
E+F+RFY K R+L+ + +G +NA F
Sbjct: 532 FEIFRRFYLAKHSGRQLTLQHHMGSADLNATF 563
Score = 132 (51.5 bits), Expect = 2.6e-34, Sum P(5) = 2.6e-34
Identities = 37/153 (24%), Positives = 73/153 (47%)
Query: 83 VYDALKHKAKDAVIDEREREQVDRALLAN------VLDI---------FVEHMLQDTSSY 127
+ D L+ D + ER+ E VDR + N +L + F L+ ++ +
Sbjct: 157 IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEF 216
Query: 128 YSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVYATQL 187
+ S ++ ++ Y++K E + +E +RV L + EE +V+ V+ EL+ + +
Sbjct: 217 FQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTI 276
Query: 188 LEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG 220
+E E SG + + K +DL+ MY+ + + G
Sbjct: 277 VEMENSGLVHMLKNGKTEDLACMYKLFSRVPNG 309
Score = 111 (44.1 bits), Expect = 2.6e-34, Sum P(5) = 2.6e-34
Identities = 27/94 (28%), Positives = 49/94 (52%)
Query: 403 LGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLS 462
+G + K+I L +ST+ IL LFN + ++ ++ + ++ +LVR L SL+
Sbjct: 577 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 635
Query: 463 I--LYYKILIKEPDTKSISRSDYFELNSKFTDRM 494
++L KEP +K I F +N +FT ++
Sbjct: 636 CGKPTQRVLTKEPKSKEIESGHIFTVNDQFTSKL 669
Score = 110 (43.8 bits), Expect = 2.6e-34, Sum P(5) = 2.6e-34
Identities = 33/114 (28%), Positives = 56/114 (49%)
Query: 220 GPHDNYMEYVTNCFMDHSLFQRALKEAF---KIFCNKTVGGFS--------SSEQLATFC 268
G N ++Y+ S F R L+E+F ++F G F S E L+ F
Sbjct: 333 GEGKNPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFI 392
Query: 269 DNILKKSGNEKLSDEAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRS 322
D+ LKK G + L+++ + ++ +KD+F +Y++ LARRLL ++S
Sbjct: 393 DDKLKK-GVKGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKS 445
Score = 102 (41.0 bits), Expect = 2.6e-34, Sum P(5) = 2.6e-34
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK + H LV+E + L F P+ KKRIEGLI ++YL R PE+ +
Sbjct: 714 RKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVY 764
>RGD|1308190 [details] [associations]
symbol:Cul3 "cullin 3" species:10116 "Rattus norvegicus"
[GO:0000090 "mitotic anaphase" evidence=IEA;ISO] [GO:0000209
"protein polyubiquitination" evidence=ISO;ISS] [GO:0000902 "cell
morphogenesis" evidence=ISO] [GO:0000910 "cytokinesis"
evidence=IEA;ISO] [GO:0001701 "in utero embryonic development"
evidence=ISO] [GO:0001831 "trophectodermal cellular morphogenesis"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO;ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005794 "Golgi apparatus" evidence=IEA;ISO]
[GO:0005827 "polar microtubule" evidence=IEA;ISO] [GO:0006513
"protein monoubiquitination" evidence=ISO;ISS] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO;ISS] [GO:0007229
"integrin-mediated signaling pathway" evidence=ISO;ISS] [GO:0007369
"gastrulation" evidence=IEA;ISO] [GO:0008054 "cyclin catabolic
process" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA;ISO] [GO:0016477 "cell migration" evidence=IEA;ISO]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0017145
"stem cell division" evidence=ISO;ISS] [GO:0030332 "cyclin binding"
evidence=IEA;ISO] [GO:0031208 "POZ domain binding"
evidence=ISO;ISS] [GO:0031463 "Cul3-RING ubiquitin ligase complex"
evidence=ISO;ISS] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0032467 "positive regulation of cytokinesis"
evidence=ISO;ISS] [GO:0035024 "negative regulation of Rho protein
signal transduction" evidence=IEA;ISO] [GO:0040016 "embryonic
cleavage" evidence=ISO;ISS] [GO:0043149 "stress fiber assembly"
evidence=IEA;ISO] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0048208 "COPII
vesicle coating" evidence=ISO;ISS] [GO:0051322 "anaphase"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 RGD:1308190 GO:GO:0005634 GO:GO:0005794
GO:GO:0016477 GO:GO:0000090 GO:GO:0016055 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0040016 GO:GO:0000910 GO:GO:0007229
GO:GO:0035024 GO:GO:0004842 eggNOG:COG5647 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0007369 GO:GO:0043149 GO:GO:0031463
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 GO:GO:0005827 HOGENOM:HOG000176712
OMA:ATFYGPI GO:GO:0048208 GO:GO:0017145 HOVERGEN:HBG003619
OrthoDB:EOG4JWVCW GO:GO:0001831 EMBL:BC168969 IPI:IPI00209412
UniGene:Rn.101949 STRING:B5DF89 PRIDE:B5DF89
Ensembl:ENSRNOT00000021528 UCSC:RGD:1308190 Genevestigator:B5DF89
Uniprot:B5DF89
Length = 768
Score = 132 (51.5 bits), Expect = 2.6e-34, Sum P(5) = 2.6e-34
Identities = 28/92 (30%), Positives = 49/92 (53%)
Query: 321 RSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKC 380
R +++ F ++L+ + G+DL+V VL TG+WP+ ++ P N+P
Sbjct: 475 RDMSISNTTMDEFRQHLQATGVSLGGVDLTVRVLTTGYWPTQSAT---PKCNIPPAPRHA 531
Query: 381 VEVFKRFYETKTKHRKLSWIYSLGQCHINAKF 412
E+F+RFY K R+L+ + +G +NA F
Sbjct: 532 FEIFRRFYLAKHSGRQLTLQHHMGSADLNATF 563
Score = 132 (51.5 bits), Expect = 2.6e-34, Sum P(5) = 2.6e-34
Identities = 37/153 (24%), Positives = 73/153 (47%)
Query: 83 VYDALKHKAKDAVIDEREREQVDRALLAN------VLDI---------FVEHMLQDTSSY 127
+ D L+ D + ER+ E VDR + N +L + F L+ ++ +
Sbjct: 157 IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEF 216
Query: 128 YSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVYATQL 187
+ S ++ ++ Y++K E + +E +RV L + EE +V+ V+ EL+ + +
Sbjct: 217 FQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTI 276
Query: 188 LEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG 220
+E E SG + + K +DL+ MY+ + + G
Sbjct: 277 VEMENSGLVHMLKNGKTEDLACMYKLFSRVPNG 309
Score = 111 (44.1 bits), Expect = 2.6e-34, Sum P(5) = 2.6e-34
Identities = 27/94 (28%), Positives = 49/94 (52%)
Query: 403 LGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLS 462
+G + K+I L +ST+ IL LFN + ++ ++ + ++ +LVR L SL+
Sbjct: 577 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 635
Query: 463 I--LYYKILIKEPDTKSISRSDYFELNSKFTDRM 494
++L KEP +K I F +N +FT ++
Sbjct: 636 CGKPTQRVLTKEPKSKEIESGHIFTVNDQFTSKL 669
Score = 110 (43.8 bits), Expect = 2.6e-34, Sum P(5) = 2.6e-34
Identities = 33/114 (28%), Positives = 56/114 (49%)
Query: 220 GPHDNYMEYVTNCFMDHSLFQRALKEAF---KIFCNKTVGGFS--------SSEQLATFC 268
G N ++Y+ S F R L+E+F ++F G F S E L+ F
Sbjct: 333 GEGKNPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFI 392
Query: 269 DNILKKSGNEKLSDEAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRS 322
D+ LKK G + L+++ + ++ +KD+F +Y++ LARRLL ++S
Sbjct: 393 DDKLKK-GVKGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKS 445
Score = 102 (41.0 bits), Expect = 2.6e-34, Sum P(5) = 2.6e-34
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK + H LV+E + L F P+ KKRIEGLI ++YL R PE+ +
Sbjct: 714 RKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVY 764
>ZFIN|ZDB-GENE-081007-1 [details] [associations]
symbol:cul3b "cullin 3b" species:7955 "Danio rerio"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-081007-1 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 KO:K03869
HOVERGEN:HBG003619 OrthoDB:EOG4JWVCW EMBL:BC163249 IPI:IPI00481059
RefSeq:NP_001177414.1 UniGene:Dr.150567 STRING:B3DIU1 GeneID:572370
KEGG:dre:572370 CTD:572370 NextBio:20890938 ArrayExpress:B3DIU1
Uniprot:B3DIU1
Length = 766
Score = 131 (51.2 bits), Expect = 3.3e-34, Sum P(5) = 3.3e-34
Identities = 37/153 (24%), Positives = 73/153 (47%)
Query: 83 VYDALKHKAKDAVIDEREREQVDRALLAN------VLDI---------FVEHMLQDTSSY 127
+ D L+ D + ER+ E VDR + N +L + F L+ ++ +
Sbjct: 156 IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEF 215
Query: 128 YSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVYATQL 187
+ S ++ ++ Y++K E + +E +RV L + EE +V+ V+ EL+ + +
Sbjct: 216 FQMESQKFLAENSASVYIKKVEARINEEIERVIHCLDKSTEEPIVKVVERELISKHMKTI 275
Query: 188 LEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG 220
+E E SG + + K +DL+ MY+ + + G
Sbjct: 276 VEMENSGLVHMLKNGKTEDLACMYKLFSRVPNG 308
Score = 129 (50.5 bits), Expect = 3.3e-34, Sum P(5) = 3.3e-34
Identities = 29/92 (31%), Positives = 47/92 (51%)
Query: 321 RSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKC 380
R +++ F ++L + G+DL V VL TG+WP+ ++ P N+P
Sbjct: 474 RDMSISNTTMDEFRQHLTSTGVSLGGVDLIVRVLTTGYWPTQSAT---PKCNIPPSPRHA 530
Query: 381 VEVFKRFYETKTKHRKLSWIYSLGQCHINAKF 412
EVF+RFY K R+L+ + +G +NA F
Sbjct: 531 FEVFRRFYLAKHSGRQLTLQHHMGSADLNATF 562
Score = 114 (45.2 bits), Expect = 3.3e-34, Sum P(5) = 3.3e-34
Identities = 28/94 (29%), Positives = 49/94 (52%)
Query: 403 LGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLS 462
+G + K+I L +ST+ IL LFN + ++ ++ + ++ +LVR L SL+
Sbjct: 575 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKSTFEEIQQETDIPERELVRALQSLA 633
Query: 463 I--LYYKILIKEPDTKSISRSDYFELNSKFTDRM 494
++L KEP +K I F +N +FT R+
Sbjct: 634 CGKPTQRVLTKEPKSKEIENGHVFTVNDQFTSRL 667
Score = 110 (43.8 bits), Expect = 3.3e-34, Sum P(5) = 3.3e-34
Identities = 33/114 (28%), Positives = 56/114 (49%)
Query: 220 GPHDNYMEYVTNCFMDHSLFQRALKEAF---KIFCNKTVGGFS--------SSEQLATFC 268
G N ++Y+ S F R L+E+F ++F G F S E L+ F
Sbjct: 332 GEGKNPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFI 391
Query: 269 DNILKKSGNEKLSDEAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRS 322
D+ LKK G + L+++ + ++ +KD+F +Y++ LARRLL ++S
Sbjct: 392 DDKLKK-GVKGLTEQEVESILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKS 444
Score = 102 (41.0 bits), Expect = 3.3e-34, Sum P(5) = 3.3e-34
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK + H LV+E + L F P+ KKRIEGLI ++YL R PE+ +
Sbjct: 712 RKKMQHNVLVAEVTQQLRARFLPSPVVIKKRIEGLIEREYLARTPEDRKVY 762
>UNIPROTKB|Q13618 [details] [associations]
symbol:CUL3 "Cullin-3" species:9606 "Homo sapiens"
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0001831 "trophectodermal cellular morphogenesis" evidence=IEA]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0030332 "cyclin binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0031463 "Cul3-RING ubiquitin ligase complex"
evidence=IDA] [GO:0000090 "mitotic anaphase" evidence=IMP]
[GO:0000910 "cytokinesis" evidence=IMP] [GO:0005827 "polar
microtubule" evidence=IDA] [GO:0051322 "anaphase" evidence=IMP]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0035024 "negative regulation of Rho
protein signal transduction" evidence=IMP] [GO:0043149 "stress
fiber assembly" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IDA]
[GO:0006513 "protein monoubiquitination" evidence=IDA] [GO:0048208
"COPII vesicle coating" evidence=IMP] [GO:0007229
"integrin-mediated signaling pathway" evidence=ISS] [GO:0017145
"stem cell division" evidence=ISS] [GO:0040016 "embryonic cleavage"
evidence=ISS] [GO:0032467 "positive regulation of cytokinesis"
evidence=IMP] [GO:0000209 "protein polyubiquitination"
evidence=IDA] [GO:0031208 "POZ domain binding" evidence=IDA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=TAS] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0008054 "cyclin catabolic process" evidence=IDA]
[GO:0007050 "cell cycle arrest" evidence=TAS] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005634
GO:GO:0005794 Reactome:REACT_6900
Pathway_Interaction_DB:aurora_b_pathway GO:GO:0016477 GO:GO:0000090
GO:GO:0016055 GO:GO:0000082 GO:GO:0008284 EMBL:CH471063
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007050 GO:GO:0040016
GO:GO:0000910 GO:GO:0007229 GO:GO:0035024 GO:GO:0097193
eggNOG:COG5647 GO:GO:0008054 SUPFAM:SSF75632 GO:GO:0007369
GO:GO:0043149 GO:GO:0031463 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0005827 KO:K03869 OMA:ATFYGPI GO:GO:0048208
GO:GO:0017145 EMBL:AF064087 EMBL:AB014517 EMBL:AF062537
EMBL:AY337761 EMBL:AK291151 EMBL:AC073052 EMBL:AC092679
EMBL:BC031844 EMBL:BC039598 EMBL:BC092409 EMBL:U58089 EMBL:AF052147
IPI:IPI00014312 IPI:IPI00382458 IPI:IPI00382459
RefSeq:NP_001244126.1 RefSeq:NP_001244127.1 RefSeq:NP_003581.1
UniGene:Hs.372286 PDB:4AP2 PDB:4APF PDB:4EOZ PDBsum:4AP2
PDBsum:4APF PDBsum:4EOZ ProteinModelPortal:Q13618 SMR:Q13618
DIP:DIP-31611N IntAct:Q13618 STRING:Q13618 PhosphoSite:Q13618
DMDM:12643396 PaxDb:Q13618 PRIDE:Q13618 Ensembl:ENST00000264414
Ensembl:ENST00000344951 Ensembl:ENST00000409096
Ensembl:ENST00000409777 GeneID:8452 KEGG:hsa:8452 UCSC:uc002vny.2
UCSC:uc010zls.1 CTD:8452 GeneCards:GC02M225298 HGNC:HGNC:2553
HPA:CAB002678 MIM:603136 MIM:614496 neXtProt:NX_Q13618
Orphanet:300530 PharmGKB:PA27049 HOVERGEN:HBG003619
InParanoid:Q13618 OrthoDB:EOG4JWVCW PhylomeDB:Q13618 ChiTaRS:CUL3
GenomeRNAi:8452 NextBio:31630 ArrayExpress:Q13618 Bgee:Q13618
CleanEx:HS_CUL3 Genevestigator:Q13618 GermOnline:ENSG00000036257
GO:GO:0001831 Uniprot:Q13618
Length = 768
Score = 132 (51.5 bits), Expect = 5.2e-34, Sum P(5) = 5.2e-34
Identities = 28/92 (30%), Positives = 49/92 (53%)
Query: 321 RSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKC 380
R +++ F ++L+ + G+DL+V VL TG+WP+ ++ P N+P
Sbjct: 475 RDMSISNTTMDEFRQHLQATGVSLGGVDLTVRVLTTGYWPTQSAT---PKCNIPPAPRHA 531
Query: 381 VEVFKRFYETKTKHRKLSWIYSLGQCHINAKF 412
E+F+RFY K R+L+ + +G +NA F
Sbjct: 532 FEIFRRFYLAKHSGRQLTLQHHMGSADLNATF 563
Score = 131 (51.2 bits), Expect = 5.2e-34, Sum P(5) = 5.2e-34
Identities = 37/153 (24%), Positives = 72/153 (47%)
Query: 83 VYDALKHKAKDAVIDEREREQVDRALLAN------VLDI---------FVEHMLQDTSSY 127
+ D L+ D + ER+ E VDR + N +L + F L+ ++ +
Sbjct: 157 IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEF 216
Query: 128 YSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVYATQL 187
+ S ++ ++ Y++K E + +E +RV L + EE +V+ V+ EL+ + +
Sbjct: 217 FQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTI 276
Query: 188 LEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG 220
+E E SG + + K +DL MY+ + + G
Sbjct: 277 VEMENSGLVHMLKNGKTEDLGCMYKLFSRVPNG 309
Score = 112 (44.5 bits), Expect = 5.2e-34, Sum P(5) = 5.2e-34
Identities = 27/94 (28%), Positives = 49/94 (52%)
Query: 403 LGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLS 462
+G + K+I L +ST+ IL LFN + ++ ++ + ++ +LVR L SL+
Sbjct: 577 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 635
Query: 463 I--LYYKILIKEPDTKSISRSDYFELNSKFTDRM 494
++L KEP +K I F +N +FT ++
Sbjct: 636 CGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKL 669
Score = 107 (42.7 bits), Expect = 5.2e-34, Sum P(5) = 5.2e-34
Identities = 27/95 (28%), Positives = 50/95 (52%)
Query: 228 YVTNCFMDHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSGNEKLSDEAIXX 287
++ F + LF++ + F+ F N S E L+ F D+ LKK G + L+++ +
Sbjct: 355 FLLESFNNDRLFKQTIAGDFEYFLNLNS---RSPEYLSLFIDDKLKK-GVKGLTEQEVET 410
Query: 288 XXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRS 322
++ +KD+F +Y++ LARRLL ++S
Sbjct: 411 ILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKS 445
Score = 102 (41.0 bits), Expect = 5.2e-34, Sum P(5) = 5.2e-34
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK + H LV+E + L F P+ KKRIEGLI ++YL R PE+ +
Sbjct: 714 RKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVY 764
>UNIPROTKB|F1SR61 [details] [associations]
symbol:LOC100511787 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
GO:GO:0005634 GO:GO:0005794 GO:GO:0016055 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0040016 GO:GO:0007229 GO:GO:0006511
SUPFAM:SSF75632 GO:GO:0031461 GO:GO:0007369 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 OMA:ATFYGPI
GO:GO:0017145 GO:GO:0001831 EMBL:AEMK01142839 EMBL:CU640472
EMBL:CU915646 Ensembl:ENSSSCT00000017677 Uniprot:F1SR61
Length = 550
Score = 132 (51.5 bits), Expect = 1.2e-33, Sum P(5) = 1.2e-33
Identities = 28/92 (30%), Positives = 49/92 (53%)
Query: 321 RSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKC 380
R +++ F ++L+ + G+DL+V VL TG+WP+ ++ P N+P
Sbjct: 257 RDMSISNTTMDEFRQHLQATGVSLGGVDLTVRVLTTGYWPTQSAT---PKCNIPPAPRHA 313
Query: 381 VEVFKRFYETKTKHRKLSWIYSLGQCHINAKF 412
E+F+RFY K R+L+ + +G +NA F
Sbjct: 314 FEIFRRFYLAKHSGRQLTLQHHMGSADLNATF 345
Score = 115 (45.5 bits), Expect = 1.2e-33, Sum P(5) = 1.2e-33
Identities = 24/89 (26%), Positives = 48/89 (53%)
Query: 132 STNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVYATQLLEKE 191
S ++ ++ Y++K E + +E +RV L + EE +V+ V+ EL+ + ++E E
Sbjct: 3 SQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEME 62
Query: 192 QSGCGALFRGNKVDDLSRMYRFYRTIRAG 220
SG + + K +DL+ MY+ + + G
Sbjct: 63 NSGLVHMLKNGKTEDLACMYKLFSRVPNG 91
Score = 112 (44.5 bits), Expect = 1.2e-33, Sum P(5) = 1.2e-33
Identities = 27/94 (28%), Positives = 49/94 (52%)
Query: 403 LGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLS 462
+G + K+I L +ST+ IL LFN + ++ ++ + ++ +LVR L SL+
Sbjct: 359 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 417
Query: 463 I--LYYKILIKEPDTKSISRSDYFELNSKFTDRM 494
++L KEP +K I F +N +FT ++
Sbjct: 418 CGKPTQRVLTKEPKSKEIKNGHIFTVNDQFTSKL 451
Score = 110 (43.8 bits), Expect = 1.2e-33, Sum P(5) = 1.2e-33
Identities = 33/114 (28%), Positives = 56/114 (49%)
Query: 220 GPHDNYMEYVTNCFMDHSLFQRALKEAF---KIFCNKTVGGFS--------SSEQLATFC 268
G N ++Y+ S F R L+E+F ++F G F S E L+ F
Sbjct: 115 GEGKNPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFI 174
Query: 269 DNILKKSGNEKLSDEAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRS 322
D+ LKK G + L+++ + ++ +KD+F +Y++ LARRLL ++S
Sbjct: 175 DDKLKK-GVKGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKS 227
Score = 102 (41.0 bits), Expect = 1.2e-33, Sum P(5) = 1.2e-33
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK + H LV+E + L F P+ KKRIEGLI ++YL R PE+ +
Sbjct: 496 RKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVY 546
>UNIPROTKB|D4A0H4 [details] [associations]
symbol:Cul2 "Cullin 2 (Predicted), isoform CRA_a"
species:10116 "Rattus norvegicus" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0031462 "Cul2-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 RGD:1310644 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
KO:K03870 CTD:8453 EMBL:CH474030 IPI:IPI00947898
RefSeq:NP_001101887.1 UniGene:Rn.2970 Ensembl:ENSRNOT00000066805
GeneID:361258 KEGG:rno:361258 NextBio:675723 Uniprot:D4A0H4
Length = 725
Score = 230 (86.0 bits), Expect = 1.6e-33, Sum P(4) = 1.6e-33
Identities = 65/231 (28%), Positives = 111/231 (48%)
Query: 115 IFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEK 174
IFV L +T YY + ++N + + C YM K LK E R +YL + K++ +
Sbjct: 206 IFVSPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKVIHE 265
Query: 175 VQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG-PH----------D 223
Q ++ + Q L E C ++ R + +D++ MY R + +G PH D
Sbjct: 266 CQQRMVADHL-QFLHSE---CHSIIRHERKNDMANMYVLLRAVSSGLPHMIEELQRHIHD 321
Query: 224 NYMEYVTNCFMDH--SLFQRALKEA---FKIFCNKTVGG---FSSS-EQLATFCDNILKK 274
+ +N +H +LF ++ E F N + G F S+ ++LA +CDN+LKK
Sbjct: 322 EGLRATSNLTQEHMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKLAKYCDNLLKK 381
Query: 275 SGNEKLSDEAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRSRTL 325
S + +++ + YI DKD+F +FY + LA+RL+ S ++
Sbjct: 382 SA-KGMTENEVEDKLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMSM 431
Score = 173 (66.0 bits), Expect = 1.6e-33, Sum P(4) = 1.6e-33
Identities = 47/186 (25%), Positives = 86/186 (46%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNA-HAGIDLSVTVLATGFWPSYKSSDL 367
+ KL R+ D S + N+ F ++R GI + VL G WP ++
Sbjct: 449 FTSKL-HRMYTDMSVSADLNNK--FNNFIRNQDTVIDLGISFQIYVLQAGAWPLTQAP-- 503
Query: 368 NPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAA 427
+ F +P ++ K V++F+ FY RKL+W++ L + + K +++TY A
Sbjct: 504 SSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMA 563
Query: 428 ILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSILYYKILIKEPDTKSISRSDYFELN 487
+L FN S +SY ++ + +L + + SL L K++ + + + I F LN
Sbjct: 564 VLLAFNNSETVSYKELQDSTQMNEKELTKTIKSL--LDVKMINHDSEKEDIDAESSFSLN 621
Query: 488 SKFTDR 493
F+ +
Sbjct: 622 MSFSSK 627
Score = 87 (35.7 bits), Expect = 1.6e-33, Sum P(4) = 1.6e-33
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLER 546
RKVL H L+ E I F P++ KK IE LI + Y+ER
Sbjct: 671 RKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIER 713
Score = 37 (18.1 bits), Expect = 1.6e-33, Sum P(4) = 1.6e-33
Identities = 5/9 (55%), Positives = 8/9 (88%)
Query: 5 RLIEFDEGW 13
R+++FDE W
Sbjct: 6 RVVDFDETW 14
Score = 37 (18.1 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 454 LVRLLHSLSILYYKILIKEPDTKSISR 480
+VR++ + +L + LI+E ++S +R
Sbjct: 664 IVRIMKARKVLRHNALIQEVISQSRAR 690
>ZFIN|ZDB-GENE-040426-2887 [details] [associations]
symbol:cul1b "cullin 1b" species:7955 "Danio
rerio" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-040426-2887 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:BX005392
IPI:IPI00609210 Ensembl:ENSDART00000134947 ArrayExpress:F1Q7M5
Bgee:F1Q7M5 Uniprot:F1Q7M5
Length = 775
Score = 169 (64.5 bits), Expect = 6.0e-33, Sum P(4) = 6.0e-33
Identities = 52/175 (29%), Positives = 83/175 (47%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLN 368
Y KL R +F N+ F+K+L + + +D S+ VL++G WP +S
Sbjct: 499 YTSKLQR--MFQDIGVSKDLNEQ-FKKHL--SNSEPLDLDFSIQVLSSGSWPFQQSCT-- 551
Query: 369 PIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAI 428
F LPS++ + + F FY ++ RKL+W+Y L + + L ST+ AI
Sbjct: 552 --FALPSELERSYQRFTAFYGSRHSGRKLTWLYHLSKGELVTNCFKNRYTLQASTFQMAI 609
Query: 429 LDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSILYYKILIKEPDTKSISRSDY 483
L FN N S Q+ + D LV++L L L K+L+ E + +I D+
Sbjct: 610 LLQFNTENCYSVQQLADSTQIKTDILVQVLQIL--LKSKLLVLEDENANIDEMDF 662
Score = 135 (52.6 bits), Expect = 6.0e-33, Sum P(4) = 6.0e-33
Identities = 33/107 (30%), Positives = 56/107 (52%)
Query: 114 DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVE 173
+ F L DT +Y+R ST ++ ++P +YM+KAE L +E+ RV YL + +++L
Sbjct: 228 EYFEAQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELAR 287
Query: 174 KVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG 220
K + ++L+ ++ E L +K +DL RMY I G
Sbjct: 288 KCE-QVLIEKHLEIFHTEFQN---LLDADKNEDLGRMYNLVSRITDG 330
Score = 116 (45.9 bits), Expect = 6.0e-33, Sum P(4) = 6.0e-33
Identities = 38/109 (34%), Positives = 50/109 (45%)
Query: 222 HDNYMEYVTNCFMDHSLFQRAL-KEAFKIFCNKTV------GGFSSSEQLATFCDNILKK 274
H Y V + F + + F AL K A F N S E LA +CD++LKK
Sbjct: 372 HKKYNALVMSAFNNDAGFVAALDKVACGRFINNNAVTRMAQSSSKSPELLARYCDSLLKK 431
Query: 275 SGNEKLSDEA-IXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRS 322
S K +EA + YI DKD+F +FY K LA+RL+ S
Sbjct: 432 SS--KNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNS 478
Score = 111 (44.1 bits), Expect = 6.0e-33, Sum P(4) = 6.0e-33
Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RKVL HQQL++E + L FKP V KK I+ LI ++YLER +T+
Sbjct: 721 RKVLKHQQLLAEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTY 771
Score = 70 (29.7 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 29/129 (22%), Positives = 58/129 (44%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFW---PSYKSS 365
Y KK RLL ++ R +++ ++ R K I+ + + T F + K+
Sbjct: 258 YMKKAEARLLEEQRRVQVYLHESTQDELAR--KCEQVLIEKHLEIFHTEFQNLLDADKNE 315
Query: 366 DLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHIN-AKFELKNIELIISTY 424
DL ++NL S++ + K+ E+ ++ L+ I G +N K ++ + Y
Sbjct: 316 DLGRMYNLVSRITDGLGELKKLLESHIHNQGLAAIEKCGDSALNDPKMYVQTTLDVHKKY 375
Query: 425 HAAILDLFN 433
+A ++ FN
Sbjct: 376 NALVMSAFN 384
Score = 63 (27.2 bits), Expect = 1.4e-25, Sum P(4) = 1.4e-25
Identities = 30/122 (24%), Positives = 57/122 (46%)
Query: 65 RRNIPGFDEFGLACFRDLVYDALKHKAKDAVID--ERER--EQVDRALLANVLDIFVEHM 120
R+ I L +R+ ++ L + +AV+ E+ER E ++ L++ V+ +VE
Sbjct: 151 RKGIYEIYSLALVTWRECLFRPLNKQVTNAVLKLVEKERNGETINTRLVSGVVQSYVELG 210
Query: 121 LQD--------TSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLV 172
L + T S Y L D Y R++ E L +++ V+ Y++ E +L+
Sbjct: 211 LNEDDAFVKGPTLSVYKEYFEAQFLADTERFYTRESTEFL--QQNPVTEYMKK-AEARLL 267
Query: 173 EK 174
E+
Sbjct: 268 EE 269
Score = 57 (25.1 bits), Expect = 5.8e-25, Sum P(4) = 5.8e-25
Identities = 44/185 (23%), Positives = 78/185 (42%)
Query: 7 IEFDEGWEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMCS---QNTPNN--NSA 61
I ++ W+ ++ GI ++ R+ + YM L+ +YN C+ Q P +S
Sbjct: 15 IGLEQIWDDLRSGIQQVYT-----RQS-MARSRYMELYTHVYNYCTSVHQARPTGIPSSK 68
Query: 62 SCKRRNIPGFDEF-GLACFR---DLVYDALKHKAKDAVIDEREREQVDRALLANVLDI-F 116
K+ PG +F GL ++ D + L + KD ++ E V + D F
Sbjct: 69 PSKKTPTPGGAQFVGLELYKRLKDFLRSYLTNLLKDG--EDLMDESVLKFYTQQWEDYRF 126
Query: 117 VEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEE----CLKKERDRVSRYLQ---SNGEE 169
+L +Y +R +W+ ++ C + + E L R+ + R L +N
Sbjct: 127 SSKVLDGICAYLNR---HWVRRE-CDEGRKGIYEIYSLALVTWRECLFRPLNKQVTNAVL 182
Query: 170 KLVEK 174
KLVEK
Sbjct: 183 KLVEK 187
Score = 41 (19.5 bits), Expect = 1.5e-15, Sum P(4) = 1.5e-15
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 147 KAEECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVY 183
K+ E L + D + + N EE +E ++++VV+
Sbjct: 416 KSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVF 452
Score = 40 (19.1 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 15/45 (33%), Positives = 20/45 (44%)
Query: 227 EYVTNCFMDH-----SLFQRALKEAFKIFCNKTVGGFSSSEQLAT 266
E VTNCF + S FQ A+ F +V + S Q+ T
Sbjct: 588 ELVTNCFKNRYTLQASTFQMAILLQFNTENCYSVQQLADSTQIKT 632
Score = 39 (18.8 bits), Expect = 3.9e-23, Sum P(4) = 3.9e-23
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 16 IQKGIGKLKRILE 28
I G+G+LK++LE
Sbjct: 327 ITDGLGELKKLLE 339
>FB|FBgn0261268 [details] [associations]
symbol:Cul-3 "Cullin-3" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0030162 "regulation of proteolysis" evidence=NAS]
[GO:0001745 "compound eye morphogenesis" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=NAS] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007476 "imaginal disc-derived wing morphogenesis"
evidence=IMP] [GO:0007423 "sensory organ development" evidence=IMP]
[GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0031463 "Cul3-RING ubiquitin
ligase complex" evidence=IPI] [GO:0007291 "sperm individualization"
evidence=IMP] [GO:0016567 "protein ubiquitination" evidence=IMP]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IMP] [GO:0030431 "sleep"
evidence=IMP] [GO:0045475 "locomotor rhythm" evidence=IMP]
[GO:0045187 "regulation of circadian sleep/wake cycle, sleep"
evidence=IMP] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:AE014134 GO:GO:0030431 GO:GO:0030162 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0048813 GO:GO:0006919 GO:GO:0007291
GO:GO:0007409 GO:GO:0045475 GO:GO:0006511 GO:GO:0019005
GO:GO:0004842 GO:GO:0007476 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031463 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 GO:GO:0001745 KO:K03869 CTD:34896
OMA:YRTESEN EMBL:BT133182 RefSeq:NP_723909.2 UniGene:Dm.18043
SMR:Q8IP45 IntAct:Q8IP45 EnsemblMetazoa:FBtr0302159 GeneID:34896
KEGG:dme:Dmel_CG42616 UCSC:CG31829-RA FlyBase:FBgn0261268
OrthoDB:EOG43R22K ChiTaRS:Cul-3 GenomeRNAi:34896 NextBio:790768
Uniprot:Q8IP45
Length = 934
Score = 128 (50.1 bits), Expect = 2.5e-32, Sum P(5) = 2.5e-32
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 333 FEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKT 392
F+ ++ N + G++L+V +L TGFWP+ ++ P N+P+ + ++FK FY K
Sbjct: 648 FKNFVNNNNLSLGGVELTVRILTTGFWPTQTAT---PNCNIPAAPREAFDIFKNFYLNKH 704
Query: 393 KHRKLSWIYSLGQCHINAKF 412
R+L+ +G +INA F
Sbjct: 705 SGRQLTLQPQMGTAYINAVF 724
Score = 128 (50.1 bits), Expect = 2.5e-32, Sum P(5) = 2.5e-32
Identities = 33/151 (21%), Positives = 72/151 (47%)
Query: 83 VYDALKHKAKDAVIDEREREQVDRALLANVLDI---------------FVEHMLQDTSSY 127
+ AL+ K V++ER E ++ + N + F + L ++++
Sbjct: 316 IQKALREKLLGMVMEERHGEAINHLAIKNACSMLITLGINSRTVYEEDFEKPFLAQSAAF 375
Query: 128 YSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVYATQL 187
Y S N++ ++ Y++K E + +E R + YL + E ++V V+ EL+ + +
Sbjct: 376 YKFESQNFLAENNAGVYIKKVEARITEESSRAALYLDKDTEPRIVRVVEEELIKKHMRPI 435
Query: 188 LEKEQSGCGALFRGNKVDDLSRMYRFYRTIR 218
+E E SG + + +K +DL+ Y+ + ++
Sbjct: 436 VEMENSGVVYMIKNSKTEDLACTYKLFSRLK 466
Score = 117 (46.2 bits), Expect = 2.5e-32, Sum P(5) = 2.5e-32
Identities = 27/100 (27%), Positives = 52/100 (52%)
Query: 223 DNYMEYVTNCFMDHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSGNEKLSD 282
D + +++ + F + +F+ + F+ F N S E L+ F D+ LKK G + +S+
Sbjct: 511 DRFDQFLVHSFANDRIFKNVISSDFEHFLNLNN---KSPEYLSLFIDDKLKKGG-KGMSE 566
Query: 283 EAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRS 322
+ I ++ +KD+F +Y+ LA+RLL ++S
Sbjct: 567 QEIESILDKTMVLFRFLLEKDVFERYYKTHLAKRLLLNKS 606
Score = 104 (41.7 bits), Expect = 2.5e-32, Sum P(5) = 2.5e-32
Identities = 23/51 (45%), Positives = 30/51 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK L H LVS+ L F P+ KKRIEGLI ++YL+R PE+ +
Sbjct: 880 RKRLAHNLLVSDVTSQLKSRFLPSPVFIKKRIEGLIEREYLQRSPEDRKVY 930
Score = 96 (38.9 bits), Expect = 2.5e-32, Sum P(5) = 2.5e-32
Identities = 27/83 (32%), Positives = 46/83 (55%)
Query: 415 KNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSI--LYYKILIKE 472
K+I L +STY +L LFN + L+Y + + ++ +LVR L SLS+ ++L++
Sbjct: 754 KHI-LQVSTYQMCVLLLFNNRDVLTYDDIHQETDIPERELVRALQSLSMGKPAQRLLVRN 812
Query: 473 PDTKS--ISRSDYFELNSKFTDR 493
TK+ I +D F +N F +
Sbjct: 813 SKTKTKDIEPTDEFYVNDAFNSK 835
Score = 42 (19.8 bits), Expect = 1.3e-23, Sum P(5) = 1.3e-23
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 144 YMRKAEECLKKERDRVSRYLQSNGEEKLVEK 174
+ R EE LK D +S YL+ G + E+
Sbjct: 462 FSRLKEEGLKVIADTMSAYLREQGRMLVKEE 492
Score = 38 (18.4 bits), Expect = 2.5e-15, Sum P(4) = 2.5e-15
Identities = 15/82 (18%), Positives = 30/82 (36%)
Query: 319 FDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMI 378
F R + FE +L N + + L + ++ I + +
Sbjct: 521 FANDRIFKNVISSDFEHFLNLNNKSPEYLSLFIDDKLKKGGKGMSEQEIESILDKTMVLF 580
Query: 379 KCV---EVFKRFYETKTKHRKL 397
+ + +VF+R+Y+T R L
Sbjct: 581 RFLLEKDVFERYYKTHLAKRLL 602
Score = 37 (18.1 bits), Expect = 4.0e-23, Sum P(5) = 4.0e-23
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 156 RDRVSRY--LQSNGEEKLVEKVQHE 178
RD+V RY +Q EKL+ V E
Sbjct: 307 RDQVVRYSEIQKALREKLLGMVMEE 331
Score = 37 (18.1 bits), Expect = 3.1e-15, Sum P(4) = 3.1e-15
Identities = 14/56 (25%), Positives = 20/56 (35%)
Query: 225 YMEYVTNCFMDHSLFQR---ALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSGN 277
Y N MD + +LK A + K G S + + +L K GN
Sbjct: 175 YKRRAFNASMDEKYVETIWASLKNAIQEIQKKNNSGLSFEQLYRNAYNMVLHKHGN 230
>UNIPROTKB|I3L5M8 [details] [associations]
symbol:LOC100739075 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 GeneTree:ENSGT00550000074299 EMBL:CU468368
Ensembl:ENSSSCT00000028601 OMA:PRQLRNT Uniprot:I3L5M8
Length = 328
Score = 238 (88.8 bits), Expect = 6.4e-32, Sum P(3) = 6.4e-32
Identities = 52/162 (32%), Positives = 85/162 (52%)
Query: 333 FEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKT 392
F++Y++ N+N I+L+V +L G+WP+Y +++ LP +M+K E+FK FY K
Sbjct: 77 FKQYMQ-NQNVPGNIELTVNILTMGYWPTYVPMEVH----LPPEMVKLQEIFKTFYLGKH 131
Query: 393 KHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHD 452
RKL W +LG C + A+F+ EL +S + +L +FN S ++ +
Sbjct: 132 SGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDG 191
Query: 453 DLVRLLHSLSILYYKILIKEPDTKSISRSDYFELNSKFTDRM 494
+L R L SL+ ++L K P K I D F N F ++
Sbjct: 192 ELRRTLQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKL 233
Score = 112 (44.5 bits), Expect = 6.4e-32, Sum P(3) = 6.4e-32
Identities = 27/51 (52%), Positives = 30/51 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK L H LVSE L KPA KKRIE LI +DY+ER ENPN +
Sbjct: 276 RKTLSHNLLVSEVYNQLKFPVKPA--DLKKRIESLIDRDYMERDKENPNQY 324
Score = 68 (29.0 bits), Expect = 6.4e-32, Sum P(3) = 6.4e-32
Identities = 15/33 (45%), Positives = 23/33 (69%)
Query: 298 YISDKDLFAEFYRKKLARRLLFDRSRTL-ARKN 329
+I KD+F FY+K LA+RLL +S ++ A K+
Sbjct: 11 FIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKS 43
>DICTYBASE|DDB_G0267384 [details] [associations]
symbol:culB "cullin B" species:44689 "Dictyostelium
discoideum" [GO:0031286 "negative regulation of sorocarp stalk cell
differentiation" evidence=IGI;IMP] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 dictyBase:DDB_G0267384 GO:GO:0007275
GenomeReviews:CM000150_GR EMBL:AAFI02000003 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511 GO:GO:0031286
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 HSSP:Q13616 ProtClustDB:CLSZ2429454 EMBL:AF144717
RefSeq:XP_647212.1 ProteinModelPortal:Q9XZJ3 STRING:Q9XZJ3
EnsemblProtists:DDB0191260 GeneID:8616016 KEGG:ddi:DDB_G0267384
OMA:SECINYL Uniprot:Q9XZJ3
Length = 771
Score = 196 (74.1 bits), Expect = 1.5e-31, Sum P(4) = 1.5e-31
Identities = 53/193 (27%), Positives = 97/193 (50%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLN 368
Y K R +F+ TL+ + F+ +L N + ID S+ VL +G W + +
Sbjct: 463 YTSKFQR--MFN-DITLSAETNEEFKNHLIKNSLSIGKIDFSILVLTSGSWSLHSQTSS- 518
Query: 369 PIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAI 428
F +P ++ C+ F+++Y T+ + RKL+W++ L + + F K+ + ++ + I
Sbjct: 519 --FIVPQELTLCISAFQQYYSTQHQGRKLNWLHHLCKAEAKSFFAKKSYDFQVTNFQLGI 576
Query: 429 LDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSILYYKILI-KEPDTKSISRSDYFELN 487
L +FN +S ++ NL ++L R L SL + KILI K+ D SI+ ++ N
Sbjct: 577 LLIFNTQESVSLEEITKFTNLNENELSRTLQSL--IEAKILISKKKDQNSINNNN--NNN 632
Query: 488 SKFTDRMRGSRSL 500
+ + G+ SL
Sbjct: 633 NNNNNNGEGNNSL 645
Score = 131 (51.2 bits), Expect = 1.5e-31, Sum P(4) = 1.5e-31
Identities = 29/100 (29%), Positives = 52/100 (52%)
Query: 121 LQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKVQHELL 180
L++T +Y+R S +I YM+KAE + +E R +YL S+ +K+ ++ H +L
Sbjct: 203 LENTRQFYTRESVAFIASSGISSYMKKAETRIDEEEQRSQKYLNSSSHDKM-RRLLHSIL 261
Query: 181 VVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG 220
+ +LL+ E C + K+D++ MY+ I G
Sbjct: 262 IEKHKELLQSE---CINYLKDEKLDEIYNMYKLLSRIEGG 298
Score = 108 (43.1 bits), Expect = 1.5e-31, Sum P(4) = 1.5e-31
Identities = 34/116 (29%), Positives = 57/116 (49%)
Query: 204 VDDLSRMYRFYRTIRAGPHDNYMEYVTNCFMD-HSLFQRALKEAFKIFCNKTVGGFSSSE 262
V+ L ++Y + +I +N + ++T + H +F + I N T S E
Sbjct: 333 VETLLKIYLQFSSIIKKSFNNDVSFITVLDLACHKIFNQN-----HITRNTT----KSPE 383
Query: 263 QLATFCDNILKKSGNEKLSDEAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLL 318
LA +CD +LKK GN++ + + Y+ DKD+F +FY K L+RRL+
Sbjct: 384 LLAKYCDMLLKK-GNKQHEEIELEEKLGQIIVLFKYVDDKDVFQKFYSKMLSRRLI 438
Score = 79 (32.9 bits), Expect = 1.5e-31, Sum P(4) = 1.5e-31
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLER 546
RK + H L+ E IE F+P + KK IE LI ++Y+ R
Sbjct: 717 RKTMNHVSLIQEVIEHSRLRFQPNIPMIKKCIEQLIEKEYITR 759
Score = 41 (19.5 bits), Expect = 2.8e-15, Sum P(3) = 2.8e-15
Identities = 16/70 (22%), Positives = 31/70 (44%)
Query: 73 EFGLACFRDLVYDALKHKAKDAVIDEREREQVD-RALLANVLDIFVEHMLQDTSSYYSRI 131
E GLA + V ++H DA+ +R D + + +L I+++ S+ + +
Sbjct: 296 EGGLAPVLETVQKYIQHVGIDAIKSIPDRNNPDPKIYVETLLKIYLQFSSIIKKSFNNDV 355
Query: 132 STNWILKDPC 141
S +L C
Sbjct: 356 SFITVLDLAC 365
>UNIPROTKB|Q13616 [details] [associations]
symbol:CUL1 "Cullin-1" species:9606 "Homo sapiens"
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0006513
"protein monoubiquitination" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS;IDA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=ISS;IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0007050 "cell cycle arrest"
evidence=TAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0097193 "intrinsic apoptotic
signaling pathway" evidence=TAS] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IDA] [GO:0000080 "G1 phase of mitotic cell
cycle" evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0007219 "Notch signaling pathway" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0051437 "positive regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051439
"regulation of ubiquitin-protein ligase activity involved in
mitotic cell cycle" evidence=TAS] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_6900 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0008285 GO:GO:0005654 GO:GO:0000082
GO:GO:0008283 GO:GO:0007219 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0007050 GO:GO:0016567 GO:GO:0009887 GO:GO:0097193
GO:GO:0019005 GO:GO:0000084 eggNOG:COG5647 GO:GO:0031145
GO:GO:0051437 SUPFAM:SSF75632 EMBL:CH471146 GO:GO:0000080
Reactome:REACT_24941 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 PDB:1U6G PDBsum:1U6G GO:GO:0031146
HOGENOM:HOG000176713 KO:K03347 OMA:SGVINCY EMBL:U58087
EMBL:AF062536 EMBL:BX537409 EMBL:AC005229 EMBL:BC125119
EMBL:BC125120 IPI:IPI00014310 RefSeq:NP_003583.2 UniGene:Hs.146806
PDB:1LDJ PDB:1LDK PDB:3RTR PDB:3TDU PDB:3TDZ PDB:4F52 PDBsum:1LDJ
PDBsum:1LDK PDBsum:3RTR PDBsum:3TDU PDBsum:3TDZ PDBsum:4F52
ProteinModelPortal:Q13616 SMR:Q13616 DIP:DIP-17013N IntAct:Q13616
MINT:MINT-120495 STRING:Q13616 PhosphoSite:Q13616 DMDM:19863257
PaxDb:Q13616 PeptideAtlas:Q13616 PRIDE:Q13616 DNASU:8454
Ensembl:ENST00000325222 Ensembl:ENST00000409469 GeneID:8454
KEGG:hsa:8454 UCSC:uc003wey.3 CTD:8454 GeneCards:GC07P148395
HGNC:HGNC:2551 HPA:CAB002676 MIM:603134 neXtProt:NX_Q13616
PharmGKB:PA27047 HOVERGEN:HBG106177 InParanoid:Q13616
OrthoDB:EOG4WH8K4 PhylomeDB:Q13616 ChiTaRS:CUL1
EvolutionaryTrace:Q13616 GenomeRNAi:8454 NextBio:31638
ArrayExpress:Q13616 Bgee:Q13616 CleanEx:HS_CUL1
Genevestigator:Q13616 GermOnline:ENSG00000055130 Uniprot:Q13616
Length = 776
Score = 148 (57.2 bits), Expect = 2.8e-31, Sum P(4) = 2.8e-31
Identities = 46/170 (27%), Positives = 79/170 (46%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLN 368
Y KL R +F N+ F+K+L + +D S+ VL++G WP +S
Sbjct: 500 YTSKLQR--MFQDIGVSKDLNEQ-FKKHL--TNSEPLDLDFSIQVLSSGSWPFQQSCT-- 552
Query: 369 PIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAI 428
F LPS++ + + F FY ++ RKL+W+Y L + + L ST+ AI
Sbjct: 553 --FALPSELERSYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAI 610
Query: 429 LDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSILYYKILIKEPDTKSI 478
L +N + + Q+ + D L ++L L L K+L+ E + ++
Sbjct: 611 LLQYNTEDAYTVQQLTDSTQIKMDILAQVLQIL--LKSKLLVLEDENANV 658
Score = 137 (53.3 bits), Expect = 2.8e-31, Sum P(4) = 2.8e-31
Identities = 33/105 (31%), Positives = 56/105 (53%)
Query: 116 FVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKV 175
F L DT +Y+R ST ++ ++P +YM+KAE L +E+ RV YL + +++L K
Sbjct: 232 FESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKC 291
Query: 176 QHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG 220
+ ++L+ ++ E L +K +DL RMY I+ G
Sbjct: 292 E-QVLIEKHLEIFHTEFQN---LLDADKNEDLGRMYNLVSRIQDG 332
Score = 123 (48.4 bits), Expect = 2.8e-31, Sum P(4) = 2.8e-31
Identities = 40/108 (37%), Positives = 53/108 (49%)
Query: 222 HDNYMEYVTNCFMDHSLFQRALKEAFKIFCNK---TVGGFSSS---EQLATFCDNILKKS 275
H Y V + F + + F AL +A F N T SSS E LA +CD++LKKS
Sbjct: 374 HKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKS 433
Query: 276 GNEKLSDEA-IXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRS 322
K +EA + YI DKD+F +FY K LA+RL+ S
Sbjct: 434 S--KNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNS 479
Score = 109 (43.4 bits), Expect = 2.8e-31, Sum P(4) = 2.8e-31
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RKVL HQQL+ E + L FKP V KK I+ LI ++YLER +T+
Sbjct: 722 RKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTY 772
Score = 79 (32.9 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 30/129 (23%), Positives = 60/129 (46%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFW---PSYKSS 365
Y KK RLL ++ R +++ ++ R K I+ + + T F + K+
Sbjct: 260 YMKKAEARLLEEQRRVQVYLHESTQDELAR--KCEQVLIEKHLEIFHTEFQNLLDADKNE 317
Query: 366 DLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHIN-AKFELKNIELIISTY 424
DL ++NL S++ + K+ ET ++ L+ I G+ +N K ++ + + Y
Sbjct: 318 DLGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKY 377
Query: 425 HAAILDLFN 433
+A ++ FN
Sbjct: 378 NALVMSAFN 386
Score = 68 (29.0 bits), Expect = 3.2e-24, Sum P(4) = 3.2e-24
Identities = 27/121 (22%), Positives = 57/121 (47%)
Query: 65 RRNIPGFDEFGLACFRDLVYDALKHKAKDAVID--ERER--EQVDRALLANVLDIFVEHM 120
R+ I L +RD ++ L + +AV+ E+ER E ++ L++ V+ +VE
Sbjct: 153 RKGIYEIYSLALVTWRDCLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELG 212
Query: 121 LQDTSSYYSRISTNWILKDPCPD-YMRKAEECLKKERDRVSRYLQSNGEEKLVEKVQHEL 179
L + ++ ++ T + K+ ++ E +E + +LQ N + ++K + L
Sbjct: 213 LNEDDAF-AKGPTLTVYKESFESQFLADTERFYTRES---TEFLQQNPVTEYMKKAEARL 268
Query: 180 L 180
L
Sbjct: 269 L 269
Score = 58 (25.5 bits), Expect = 3.4e-23, Sum P(4) = 3.4e-23
Identities = 43/186 (23%), Positives = 79/186 (42%)
Query: 7 IEFDEGWEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMCSQNTPNNNS------ 60
I D+ W+ ++ GI ++ R+ + YM L+ +YN C+ +N +
Sbjct: 15 IGLDQIWDDLRAGIQQVYT-----RQS-MAKSRYMELYTHVYNYCTSVHQSNQARGAGVP 68
Query: 61 -ASCKRRNIPGFDEF-GLACFRDLVYDALKHKAKDAVIDERER--EQVDRALLANVLDI- 115
+ K+ PG +F GL ++ L + LK+ + + D + E V + D
Sbjct: 69 PSKSKKGQTPGGAQFVGLELYKRLK-EFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYR 127
Query: 116 FVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEE----CLKKERDRVSRYLQ---SNGE 168
F +L +Y +R +W+ ++ C + + E L RD + R L +N
Sbjct: 128 FSSKVLNGICAYLNR---HWVRRE-CDEGRKGIYEIYSLALVTWRDCLFRPLNKQVTNAV 183
Query: 169 EKLVEK 174
KL+EK
Sbjct: 184 LKLIEK 189
Score = 45 (20.9 bits), Expect = 7.1e-22, Sum P(4) = 7.1e-22
Identities = 8/13 (61%), Positives = 12/13 (92%)
Query: 16 IQKGIGKLKRILE 28
IQ G+G+LK++LE
Sbjct: 329 IQDGLGELKKLLE 341
Score = 41 (19.5 bits), Expect = 1.3e-13, Sum P(4) = 1.3e-13
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 147 KAEECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVY 183
K+ E L + D + + N EE +E ++++VV+
Sbjct: 417 KSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVF 453
Score = 38 (18.4 bits), Expect = 1.7e-11, Sum P(3) = 1.7e-11
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 227 EYVTNCFMDH-----SLFQRALKEAFKIFCNKTVGGFSSSEQL 264
E VTNCF + S FQ A+ + TV + S Q+
Sbjct: 589 ELVTNCFKNRYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQI 631
>UNIPROTKB|Q5R4G6 [details] [associations]
symbol:CUL1 "Cullin-1" species:9601 "Pongo abelii"
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0006915
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009887
GO:GO:0019005 SUPFAM:SSF75632 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0031146 GeneTree:ENSGT00550000074299
KO:K03347 OMA:SGVINCY CTD:8454 HOVERGEN:HBG106177 EMBL:CR861282
RefSeq:NP_001126972.1 UniGene:Pab.18495 ProteinModelPortal:Q5R4G6
SMR:Q5R4G6 PRIDE:Q5R4G6 Ensembl:ENSPPYT00000021153 GeneID:100173991
KEGG:pon:100173991 InParanoid:Q5R4G6 Uniprot:Q5R4G6
Length = 776
Score = 148 (57.2 bits), Expect = 2.8e-31, Sum P(4) = 2.8e-31
Identities = 46/170 (27%), Positives = 79/170 (46%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLN 368
Y KL R +F N+ F+K+L + +D S+ VL++G WP +S
Sbjct: 500 YTSKLQR--MFQDIGVSKDLNEQ-FKKHL--TNSEPLDLDFSIQVLSSGSWPFQQSCT-- 552
Query: 369 PIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAI 428
F LPS++ + + F FY ++ RKL+W+Y L + + L ST+ AI
Sbjct: 553 --FALPSELERSYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAI 610
Query: 429 LDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSILYYKILIKEPDTKSI 478
L +N + + Q+ + D L ++L L L K+L+ E + ++
Sbjct: 611 LLQYNTEDAYTVQQLTDSTQIKMDILAQVLQIL--LKSKLLVLEDENANV 658
Score = 137 (53.3 bits), Expect = 2.8e-31, Sum P(4) = 2.8e-31
Identities = 33/105 (31%), Positives = 56/105 (53%)
Query: 116 FVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKV 175
F L DT +Y+R ST ++ ++P +YM+KAE L +E+ RV YL + +++L K
Sbjct: 232 FESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKC 291
Query: 176 QHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG 220
+ ++L+ ++ E L +K +DL RMY I+ G
Sbjct: 292 E-QVLIEKHLEIFHTEFQN---LLDADKNEDLGRMYNLVSRIQDG 332
Score = 123 (48.4 bits), Expect = 2.8e-31, Sum P(4) = 2.8e-31
Identities = 40/108 (37%), Positives = 53/108 (49%)
Query: 222 HDNYMEYVTNCFMDHSLFQRALKEAFKIFCNK---TVGGFSSS---EQLATFCDNILKKS 275
H Y V + F + + F AL +A F N T SSS E LA +CD++LKKS
Sbjct: 374 HKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKS 433
Query: 276 GNEKLSDEA-IXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRS 322
K +EA + YI DKD+F +FY K LA+RL+ S
Sbjct: 434 S--KNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNS 479
Score = 109 (43.4 bits), Expect = 2.8e-31, Sum P(4) = 2.8e-31
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RKVL HQQL+ E + L FKP V KK I+ LI ++YLER +T+
Sbjct: 722 RKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTY 772
Score = 79 (32.9 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 30/129 (23%), Positives = 60/129 (46%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFW---PSYKSS 365
Y KK RLL ++ R +++ ++ R K I+ + + T F + K+
Sbjct: 260 YMKKAEARLLEEQRRVQVYLHESTQDELAR--KCEQVLIEKHLEIFHTEFQNLLDADKNE 317
Query: 366 DLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHIN-AKFELKNIELIISTY 424
DL ++NL S++ + K+ ET ++ L+ I G+ +N K ++ + + Y
Sbjct: 318 DLGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKY 377
Query: 425 HAAILDLFN 433
+A ++ FN
Sbjct: 378 NALVMSAFN 386
Score = 68 (29.0 bits), Expect = 3.2e-24, Sum P(4) = 3.2e-24
Identities = 27/121 (22%), Positives = 57/121 (47%)
Query: 65 RRNIPGFDEFGLACFRDLVYDALKHKAKDAVID--ERER--EQVDRALLANVLDIFVEHM 120
R+ I L +RD ++ L + +AV+ E+ER E ++ L++ V+ +VE
Sbjct: 153 RKGIYEIYSLALVTWRDCLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELG 212
Query: 121 LQDTSSYYSRISTNWILKDPCPD-YMRKAEECLKKERDRVSRYLQSNGEEKLVEKVQHEL 179
L + ++ ++ T + K+ ++ E +E + +LQ N + ++K + L
Sbjct: 213 LNEDDAF-AKGPTLTVYKESFESQFLADTERFYTRES---TEFLQQNPVTEYMKKAEARL 268
Query: 180 L 180
L
Sbjct: 269 L 269
Score = 58 (25.5 bits), Expect = 3.4e-23, Sum P(4) = 3.4e-23
Identities = 43/186 (23%), Positives = 79/186 (42%)
Query: 7 IEFDEGWEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMCSQNTPNNNS------ 60
I D+ W+ ++ GI ++ R+ + YM L+ +YN C+ +N +
Sbjct: 15 IGLDQIWDDLRAGIQQVYT-----RQS-MAKSRYMELYTHVYNYCTSVHQSNQARGAGVP 68
Query: 61 -ASCKRRNIPGFDEF-GLACFRDLVYDALKHKAKDAVIDERER--EQVDRALLANVLDI- 115
+ K+ PG +F GL ++ L + LK+ + + D + E V + D
Sbjct: 69 PSKSKKGQTPGGAQFVGLELYKRLK-EFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYR 127
Query: 116 FVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEE----CLKKERDRVSRYLQ---SNGE 168
F +L +Y +R +W+ ++ C + + E L RD + R L +N
Sbjct: 128 FSSKVLNGICAYLNR---HWVRRE-CDEGRKGIYEIYSLALVTWRDCLFRPLNKQVTNAV 183
Query: 169 EKLVEK 174
KL+EK
Sbjct: 184 LKLIEK 189
Score = 45 (20.9 bits), Expect = 7.1e-22, Sum P(4) = 7.1e-22
Identities = 8/13 (61%), Positives = 12/13 (92%)
Query: 16 IQKGIGKLKRILE 28
IQ G+G+LK++LE
Sbjct: 329 IQDGLGELKKLLE 341
Score = 41 (19.5 bits), Expect = 1.3e-13, Sum P(4) = 1.3e-13
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 147 KAEECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVY 183
K+ E L + D + + N EE +E ++++VV+
Sbjct: 417 KSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVF 453
Score = 38 (18.4 bits), Expect = 1.7e-11, Sum P(3) = 1.7e-11
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 227 EYVTNCFMDH-----SLFQRALKEAFKIFCNKTVGGFSSSEQL 264
E VTNCF + S FQ A+ + TV + S Q+
Sbjct: 589 ELVTNCFKNRYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQI 631
>MGI|MGI:1349658 [details] [associations]
symbol:Cul1 "cullin 1" species:10090 "Mus musculus"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IC]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0006513 "protein monoubiquitination" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0009887 "organ morphogenesis" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=ISO;IC] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO;IDA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO;IDA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 MGI:MGI:1349658 GO:GO:0006915 GO:GO:0019048
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009887
GO:GO:0019005 GO:GO:0004842 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0031146
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713 KO:K03347
OMA:SGVINCY CTD:8454 HOVERGEN:HBG106177 OrthoDB:EOG4WH8K4
ChiTaRS:CUL1 EMBL:AF083216 EMBL:AF176910 EMBL:AF136441
EMBL:BC029260 IPI:IPI00124047 RefSeq:NP_036172.1 UniGene:Mm.87611
ProteinModelPortal:Q9WTX6 SMR:Q9WTX6 DIP:DIP-39799N IntAct:Q9WTX6
STRING:Q9WTX6 PhosphoSite:Q9WTX6 PaxDb:Q9WTX6 PRIDE:Q9WTX6
Ensembl:ENSMUST00000031697 GeneID:26965 KEGG:mmu:26965
UCSC:uc009bsz.1 InParanoid:Q9WTX6 NextBio:304903 Bgee:Q9WTX6
CleanEx:MM_CUL1 Genevestigator:Q9WTX6 GermOnline:ENSMUSG00000029686
Uniprot:Q9WTX6
Length = 776
Score = 148 (57.2 bits), Expect = 2.8e-31, Sum P(4) = 2.8e-31
Identities = 46/170 (27%), Positives = 79/170 (46%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLN 368
Y KL R +F N+ F+K+L + +D S+ VL++G WP +S
Sbjct: 500 YTSKLQR--MFQDIGVSKDLNEQ-FKKHL--TNSEPLDLDFSIQVLSSGSWPFQQSCT-- 552
Query: 369 PIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAI 428
F LPS++ + + F FY ++ RKL+W+Y L + + L ST+ AI
Sbjct: 553 --FALPSELERSYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAI 610
Query: 429 LDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSILYYKILIKEPDTKSI 478
L +N + + Q+ + D L ++L L L K+L+ E + ++
Sbjct: 611 LLQYNTEDAYTVQQLTDSTQIKMDILAQVLQIL--LKSKLLVLEDENANV 658
Score = 137 (53.3 bits), Expect = 2.8e-31, Sum P(4) = 2.8e-31
Identities = 33/105 (31%), Positives = 56/105 (53%)
Query: 116 FVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKV 175
F L DT +Y+R ST ++ ++P +YM+KAE L +E+ RV YL + +++L K
Sbjct: 232 FESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKC 291
Query: 176 QHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG 220
+ ++L+ ++ E L +K +DL RMY I+ G
Sbjct: 292 E-QVLIEKHLEIFHTEFQN---LLDADKNEDLGRMYNLVSRIQDG 332
Score = 123 (48.4 bits), Expect = 2.8e-31, Sum P(4) = 2.8e-31
Identities = 40/108 (37%), Positives = 53/108 (49%)
Query: 222 HDNYMEYVTNCFMDHSLFQRALKEAFKIFCNK---TVGGFSSS---EQLATFCDNILKKS 275
H Y V + F + + F AL +A F N T SSS E LA +CD++LKKS
Sbjct: 374 HKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKS 433
Query: 276 GNEKLSDEA-IXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRS 322
K +EA + YI DKD+F +FY K LA+RL+ S
Sbjct: 434 S--KNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNS 479
Score = 109 (43.4 bits), Expect = 2.8e-31, Sum P(4) = 2.8e-31
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RKVL HQQL+ E + L FKP V KK I+ LI ++YLER +T+
Sbjct: 722 RKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTY 772
Score = 79 (32.9 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 30/129 (23%), Positives = 60/129 (46%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFW---PSYKSS 365
Y KK RLL ++ R +++ ++ R K I+ + + T F + K+
Sbjct: 260 YMKKAEARLLEEQRRVQVYLHESTQDELAR--KCEQVLIEKHLEIFHTEFQNLLDADKNE 317
Query: 366 DLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHIN-AKFELKNIELIISTY 424
DL ++NL S++ + K+ ET ++ L+ I G+ +N K ++ + + Y
Sbjct: 318 DLGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKY 377
Query: 425 HAAILDLFN 433
+A ++ FN
Sbjct: 378 NALVMSAFN 386
Score = 68 (29.0 bits), Expect = 3.2e-24, Sum P(4) = 3.2e-24
Identities = 27/121 (22%), Positives = 57/121 (47%)
Query: 65 RRNIPGFDEFGLACFRDLVYDALKHKAKDAVID--ERER--EQVDRALLANVLDIFVEHM 120
R+ I L +RD ++ L + +AV+ E+ER E ++ L++ V+ +VE
Sbjct: 153 RKGIYEIYSLALVTWRDCLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELG 212
Query: 121 LQDTSSYYSRISTNWILKDPCPD-YMRKAEECLKKERDRVSRYLQSNGEEKLVEKVQHEL 179
L + ++ ++ T + K+ ++ E +E + +LQ N + ++K + L
Sbjct: 213 LNEDDAF-AKGPTLTVYKESFESQFLADTERFYTRES---TEFLQQNPVTEYMKKAEARL 268
Query: 180 L 180
L
Sbjct: 269 L 269
Score = 58 (25.5 bits), Expect = 3.4e-23, Sum P(4) = 3.4e-23
Identities = 43/186 (23%), Positives = 79/186 (42%)
Query: 7 IEFDEGWEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMCSQNTPNNNS------ 60
I D+ W+ ++ GI ++ R+ + YM L+ +YN C+ +N +
Sbjct: 15 IGLDQIWDDLRAGIQQVYT-----RQS-MAKSRYMELYTHVYNYCTSVHQSNQARGAGVP 68
Query: 61 -ASCKRRNIPGFDEF-GLACFRDLVYDALKHKAKDAVIDERER--EQVDRALLANVLDI- 115
+ K+ PG +F GL ++ L + LK+ + + D + E V + D
Sbjct: 69 PSKSKKGQTPGGAQFVGLELYKRLK-EFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYR 127
Query: 116 FVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEE----CLKKERDRVSRYLQ---SNGE 168
F +L +Y +R +W+ ++ C + + E L RD + R L +N
Sbjct: 128 FSSKVLNGICAYLNR---HWVRRE-CDEGRKGIYEIYSLALVTWRDCLFRPLNKQVTNAV 183
Query: 169 EKLVEK 174
KL+EK
Sbjct: 184 LKLIEK 189
Score = 45 (20.9 bits), Expect = 7.1e-22, Sum P(4) = 7.1e-22
Identities = 8/13 (61%), Positives = 12/13 (92%)
Query: 16 IQKGIGKLKRILE 28
IQ G+G+LK++LE
Sbjct: 329 IQDGLGELKKLLE 341
Score = 41 (19.5 bits), Expect = 1.3e-13, Sum P(4) = 1.3e-13
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 147 KAEECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVY 183
K+ E L + D + + N EE +E ++++VV+
Sbjct: 417 KSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVF 453
Score = 38 (18.4 bits), Expect = 1.7e-11, Sum P(3) = 1.7e-11
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 227 EYVTNCFMDH-----SLFQRALKEAFKIFCNKTVGGFSSSEQL 264
E VTNCF + S FQ A+ + TV + S Q+
Sbjct: 589 ELVTNCFKNRYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQI 631
>RGD|1308157 [details] [associations]
symbol:Cul1 "cullin 1" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0006513 "protein
monoubiquitination" evidence=IEA;ISO] [GO:0006915 "apoptotic
process" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0008283 "cell proliferation" evidence=IEA;ISO]
[GO:0009887 "organ morphogenesis" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA;ISO] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
RGD:1308157 GO:GO:0006915 GO:GO:0008283 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0009887 GO:GO:0006511 GO:GO:0019005
EMBL:CH473959 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0006513
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176713 KO:K03347 OMA:SGVINCY CTD:8454
HOVERGEN:HBG106177 OrthoDB:EOG4WH8K4 EMBL:BC161932 IPI:IPI00358206
RefSeq:NP_001102097.1 UniGene:Rn.68078 SMR:B1WBY1 STRING:B1WBY1
Ensembl:ENSRNOT00000007620 GeneID:362356 KEGG:rno:362356
UCSC:RGD:1308157 NextBio:679624 Genevestigator:B1WBY1
Uniprot:B1WBY1
Length = 776
Score = 148 (57.2 bits), Expect = 2.8e-31, Sum P(4) = 2.8e-31
Identities = 46/170 (27%), Positives = 79/170 (46%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLN 368
Y KL R +F N+ F+K+L + +D S+ VL++G WP +S
Sbjct: 500 YTSKLQR--MFQDIGVSKDLNEQ-FKKHL--TNSEPLDLDFSIQVLSSGSWPFQQSCT-- 552
Query: 369 PIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAI 428
F LPS++ + + F FY ++ RKL+W+Y L + + L ST+ AI
Sbjct: 553 --FALPSELERSYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAI 610
Query: 429 LDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSILYYKILIKEPDTKSI 478
L +N + + Q+ + D L ++L L L K+L+ E + ++
Sbjct: 611 LLQYNTEDAYTVQQLTDSTQIKMDILAQVLQIL--LKSKLLVLEDENANV 658
Score = 137 (53.3 bits), Expect = 2.8e-31, Sum P(4) = 2.8e-31
Identities = 33/105 (31%), Positives = 56/105 (53%)
Query: 116 FVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKV 175
F L DT +Y+R ST ++ ++P +YM+KAE L +E+ RV YL + +++L K
Sbjct: 232 FESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKC 291
Query: 176 QHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG 220
+ ++L+ ++ E L +K +DL RMY I+ G
Sbjct: 292 E-QVLIEKHLEIFHTEFQN---LLDADKNEDLGRMYNLVSRIQDG 332
Score = 123 (48.4 bits), Expect = 2.8e-31, Sum P(4) = 2.8e-31
Identities = 40/108 (37%), Positives = 53/108 (49%)
Query: 222 HDNYMEYVTNCFMDHSLFQRALKEAFKIFCNK---TVGGFSSS---EQLATFCDNILKKS 275
H Y V + F + + F AL +A F N T SSS E LA +CD++LKKS
Sbjct: 374 HKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKS 433
Query: 276 GNEKLSDEA-IXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRS 322
K +EA + YI DKD+F +FY K LA+RL+ S
Sbjct: 434 S--KNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNS 479
Score = 109 (43.4 bits), Expect = 2.8e-31, Sum P(4) = 2.8e-31
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RKVL HQQL+ E + L FKP V KK I+ LI ++YLER +T+
Sbjct: 722 RKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTY 772
Score = 79 (32.9 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 30/129 (23%), Positives = 60/129 (46%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFW---PSYKSS 365
Y KK RLL ++ R +++ ++ R K I+ + + T F + K+
Sbjct: 260 YMKKAEARLLEEQRRVQVYLHESTQDELAR--KCEQVLIEKHLEIFHTEFQNLLDADKNE 317
Query: 366 DLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHIN-AKFELKNIELIISTY 424
DL ++NL S++ + K+ ET ++ L+ I G+ +N K ++ + + Y
Sbjct: 318 DLGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKY 377
Query: 425 HAAILDLFN 433
+A ++ FN
Sbjct: 378 NALVMSAFN 386
Score = 68 (29.0 bits), Expect = 3.2e-24, Sum P(4) = 3.2e-24
Identities = 27/121 (22%), Positives = 57/121 (47%)
Query: 65 RRNIPGFDEFGLACFRDLVYDALKHKAKDAVID--ERER--EQVDRALLANVLDIFVEHM 120
R+ I L +RD ++ L + +AV+ E+ER E ++ L++ V+ +VE
Sbjct: 153 RKGIYEIYSLALVTWRDCLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELG 212
Query: 121 LQDTSSYYSRISTNWILKDPCPD-YMRKAEECLKKERDRVSRYLQSNGEEKLVEKVQHEL 179
L + ++ ++ T + K+ ++ E +E + +LQ N + ++K + L
Sbjct: 213 LNEDDAF-AKGPTLTVYKESFESQFLADTERFYTRES---TEFLQQNPVTEYMKKAEARL 268
Query: 180 L 180
L
Sbjct: 269 L 269
Score = 58 (25.5 bits), Expect = 3.4e-23, Sum P(4) = 3.4e-23
Identities = 43/186 (23%), Positives = 79/186 (42%)
Query: 7 IEFDEGWEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMCSQNTPNNNS------ 60
I D+ W+ ++ GI ++ R+ + YM L+ +YN C+ +N +
Sbjct: 15 IGLDQIWDDLRAGIQQVYT-----RQS-MAKSRYMELYTHVYNYCTSVHQSNQARGAGVP 68
Query: 61 -ASCKRRNIPGFDEF-GLACFRDLVYDALKHKAKDAVIDERER--EQVDRALLANVLDI- 115
+ K+ PG +F GL ++ L + LK+ + + D + E V + D
Sbjct: 69 PSKSKKGQTPGGAQFVGLELYKRLK-EFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYR 127
Query: 116 FVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEE----CLKKERDRVSRYLQ---SNGE 168
F +L +Y +R +W+ ++ C + + E L RD + R L +N
Sbjct: 128 FSSKVLNGICAYLNR---HWVRRE-CDEGRKGIYEIYSLALVTWRDCLFRPLNKQVTNAV 183
Query: 169 EKLVEK 174
KL+EK
Sbjct: 184 LKLIEK 189
Score = 45 (20.9 bits), Expect = 7.1e-22, Sum P(4) = 7.1e-22
Identities = 8/13 (61%), Positives = 12/13 (92%)
Query: 16 IQKGIGKLKRILE 28
IQ G+G+LK++LE
Sbjct: 329 IQDGLGELKKLLE 341
Score = 41 (19.5 bits), Expect = 1.3e-13, Sum P(4) = 1.3e-13
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 147 KAEECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVY 183
K+ E L + D + + N EE +E ++++VV+
Sbjct: 417 KSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVF 453
Score = 38 (18.4 bits), Expect = 1.7e-11, Sum P(3) = 1.7e-11
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 227 EYVTNCFMDH-----SLFQRALKEAFKIFCNKTVGGFSSSEQL 264
E VTNCF + S FQ A+ + TV + S Q+
Sbjct: 589 ELVTNCFKNRYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQI 631
>UNIPROTKB|F1MYD0 [details] [associations]
symbol:CUL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
GO:GO:0006915 GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0009887 GO:GO:0006511 GO:GO:0019005 SUPFAM:SSF75632
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K03347 OMA:SGVINCY CTD:8454
EMBL:DAAA02011928 IPI:IPI01002552 RefSeq:NP_001180162.1
UniGene:Bt.6490 ProteinModelPortal:F1MYD0
Ensembl:ENSBTAT00000011513 GeneID:407228 KEGG:bta:407228
NextBio:20818478 Uniprot:F1MYD0
Length = 776
Score = 148 (57.2 bits), Expect = 2.8e-31, Sum P(4) = 2.8e-31
Identities = 46/170 (27%), Positives = 79/170 (46%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLN 368
Y KL R +F N+ F+K+L + +D S+ VL++G WP +S
Sbjct: 500 YTSKLQR--MFQDIGVSKDLNEQ-FKKHL--TNSEPLDLDFSIQVLSSGSWPFQQSCT-- 552
Query: 369 PIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAI 428
F LPS++ + + F FY ++ RKL+W+Y L + + L ST+ AI
Sbjct: 553 --FALPSELERSYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAI 610
Query: 429 LDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSILYYKILIKEPDTKSI 478
L +N + + Q+ + D L ++L L L K+L+ E + ++
Sbjct: 611 LLQYNTEDAYAVQQLTDSTQIKMDILAQVLQIL--LKSKLLVLEDENANV 658
Score = 137 (53.3 bits), Expect = 2.8e-31, Sum P(4) = 2.8e-31
Identities = 33/105 (31%), Positives = 56/105 (53%)
Query: 116 FVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKV 175
F L DT +Y+R ST ++ ++P +YM+KAE L +E+ RV YL + +++L K
Sbjct: 232 FESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKC 291
Query: 176 QHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG 220
+ ++L+ ++ E L +K +DL RMY I+ G
Sbjct: 292 E-QVLIEKHLEIFHTEFQN---LLDADKNEDLGRMYNLVSRIQDG 332
Score = 123 (48.4 bits), Expect = 2.8e-31, Sum P(4) = 2.8e-31
Identities = 40/108 (37%), Positives = 53/108 (49%)
Query: 222 HDNYMEYVTNCFMDHSLFQRALKEAFKIFCNK---TVGGFSSS---EQLATFCDNILKKS 275
H Y V + F + + F AL +A F N T SSS E LA +CD++LKKS
Sbjct: 374 HKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKS 433
Query: 276 GNEKLSDEA-IXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRS 322
K +EA + YI DKD+F +FY K LA+RL+ S
Sbjct: 434 S--KNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNS 479
Score = 109 (43.4 bits), Expect = 2.8e-31, Sum P(4) = 2.8e-31
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RKVL HQQL+ E + L FKP V KK I+ LI ++YLER +T+
Sbjct: 722 RKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTY 772
Score = 79 (32.9 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 30/129 (23%), Positives = 60/129 (46%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFW---PSYKSS 365
Y KK RLL ++ R +++ ++ R K I+ + + T F + K+
Sbjct: 260 YMKKAEARLLEEQRRVQVYLHESTQDELAR--KCEQVLIEKHLEIFHTEFQNLLDADKNE 317
Query: 366 DLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHIN-AKFELKNIELIISTY 424
DL ++NL S++ + K+ ET ++ L+ I G+ +N K ++ + + Y
Sbjct: 318 DLGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKY 377
Query: 425 HAAILDLFN 433
+A ++ FN
Sbjct: 378 NALVMSAFN 386
Score = 68 (29.0 bits), Expect = 3.2e-24, Sum P(4) = 3.2e-24
Identities = 27/121 (22%), Positives = 57/121 (47%)
Query: 65 RRNIPGFDEFGLACFRDLVYDALKHKAKDAVID--ERER--EQVDRALLANVLDIFVEHM 120
R+ I L +RD ++ L + +AV+ E+ER E ++ L++ V+ +VE
Sbjct: 153 RKGIYEIYSLALVTWRDCLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELG 212
Query: 121 LQDTSSYYSRISTNWILKDPCPD-YMRKAEECLKKERDRVSRYLQSNGEEKLVEKVQHEL 179
L + ++ ++ T + K+ ++ E +E + +LQ N + ++K + L
Sbjct: 213 LNEDDAF-AKGPTLTVYKESFESQFLADTERFYTRES---TEFLQQNPVTEYMKKAEARL 268
Query: 180 L 180
L
Sbjct: 269 L 269
Score = 58 (25.5 bits), Expect = 3.4e-23, Sum P(4) = 3.4e-23
Identities = 43/186 (23%), Positives = 79/186 (42%)
Query: 7 IEFDEGWEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMCSQNTPNNNS------ 60
I D+ W+ ++ GI ++ R+ + YM L+ +YN C+ +N +
Sbjct: 15 IGLDQIWDDLRAGIQQVYT-----RQS-MAKSRYMELYTHVYNYCTSVHQSNQARGAGVP 68
Query: 61 -ASCKRRNIPGFDEF-GLACFRDLVYDALKHKAKDAVIDERER--EQVDRALLANVLDI- 115
+ K+ PG +F GL ++ L + LK+ + + D + E V + D
Sbjct: 69 PSKSKKGQTPGGAQFVGLELYKRLK-EFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYR 127
Query: 116 FVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEE----CLKKERDRVSRYLQ---SNGE 168
F +L +Y +R +W+ ++ C + + E L RD + R L +N
Sbjct: 128 FSSKVLNGICAYLNR---HWVRRE-CDEGRKGIYEIYSLALVTWRDCLFRPLNKQVTNAV 183
Query: 169 EKLVEK 174
KL+EK
Sbjct: 184 LKLIEK 189
Score = 45 (20.9 bits), Expect = 7.1e-22, Sum P(4) = 7.1e-22
Identities = 8/13 (61%), Positives = 12/13 (92%)
Query: 16 IQKGIGKLKRILE 28
IQ G+G+LK++LE
Sbjct: 329 IQDGLGELKKLLE 341
Score = 41 (19.5 bits), Expect = 1.3e-13, Sum P(4) = 1.3e-13
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 147 KAEECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVY 183
K+ E L + D + + N EE +E ++++VV+
Sbjct: 417 KSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVF 453
>UNIPROTKB|E2R1V2 [details] [associations]
symbol:CUL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K03347 OMA:SGVINCY CTD:8454
EMBL:AAEX03010158 EMBL:AAEX03010159 RefSeq:XP_848402.1
ProteinModelPortal:E2R1V2 Ensembl:ENSCAFT00000005562 GeneID:475512
KEGG:cfa:475512 Uniprot:E2R1V2
Length = 776
Score = 148 (57.2 bits), Expect = 2.8e-31, Sum P(4) = 2.8e-31
Identities = 46/170 (27%), Positives = 79/170 (46%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLN 368
Y KL R +F N+ F+K+L + +D S+ VL++G WP +S
Sbjct: 500 YTSKLQR--MFQDIGVSKDLNEQ-FKKHL--TNSEPLDLDFSIQVLSSGSWPFQQSCT-- 552
Query: 369 PIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAI 428
F LPS++ + + F FY ++ RKL+W+Y L + + L ST+ AI
Sbjct: 553 --FALPSELERSYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAI 610
Query: 429 LDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSILYYKILIKEPDTKSI 478
L +N + + Q+ + D L ++L L L K+L+ E + ++
Sbjct: 611 LLQYNTEDAYAVQQLTDSTQIKMDILAQVLQIL--LKSKLLVLEDENANV 658
Score = 137 (53.3 bits), Expect = 2.8e-31, Sum P(4) = 2.8e-31
Identities = 33/105 (31%), Positives = 56/105 (53%)
Query: 116 FVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKV 175
F L DT +Y+R ST ++ ++P +YM+KAE L +E+ RV YL + +++L K
Sbjct: 232 FESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKC 291
Query: 176 QHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG 220
+ ++L+ ++ E L +K +DL RMY I+ G
Sbjct: 292 E-QVLIEKHLEIFHTEFQN---LLDADKNEDLGRMYNLVSRIQDG 332
Score = 123 (48.4 bits), Expect = 2.8e-31, Sum P(4) = 2.8e-31
Identities = 40/108 (37%), Positives = 53/108 (49%)
Query: 222 HDNYMEYVTNCFMDHSLFQRALKEAFKIFCNK---TVGGFSSS---EQLATFCDNILKKS 275
H Y V + F + + F AL +A F N T SSS E LA +CD++LKKS
Sbjct: 374 HKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKS 433
Query: 276 GNEKLSDEA-IXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRS 322
K +EA + YI DKD+F +FY K LA+RL+ S
Sbjct: 434 S--KNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNS 479
Score = 109 (43.4 bits), Expect = 2.8e-31, Sum P(4) = 2.8e-31
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RKVL HQQL+ E + L FKP V KK I+ LI ++YLER +T+
Sbjct: 722 RKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTY 772
Score = 79 (32.9 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 30/129 (23%), Positives = 60/129 (46%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFW---PSYKSS 365
Y KK RLL ++ R +++ ++ R K I+ + + T F + K+
Sbjct: 260 YMKKAEARLLEEQRRVQVYLHESTQDELAR--KCEQVLIEKHLEIFHTEFQNLLDADKNE 317
Query: 366 DLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHIN-AKFELKNIELIISTY 424
DL ++NL S++ + K+ ET ++ L+ I G+ +N K ++ + + Y
Sbjct: 318 DLGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKY 377
Query: 425 HAAILDLFN 433
+A ++ FN
Sbjct: 378 NALVMSAFN 386
Score = 68 (29.0 bits), Expect = 3.2e-24, Sum P(4) = 3.2e-24
Identities = 27/121 (22%), Positives = 57/121 (47%)
Query: 65 RRNIPGFDEFGLACFRDLVYDALKHKAKDAVID--ERER--EQVDRALLANVLDIFVEHM 120
R+ I L +RD ++ L + +AV+ E+ER E ++ L++ V+ +VE
Sbjct: 153 RKGIYEIYSLALVTWRDCLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELG 212
Query: 121 LQDTSSYYSRISTNWILKDPCPD-YMRKAEECLKKERDRVSRYLQSNGEEKLVEKVQHEL 179
L + ++ ++ T + K+ ++ E +E + +LQ N + ++K + L
Sbjct: 213 LNEDDAF-AKGPTLTVYKESFESQFLADTERFYTRES---TEFLQQNPVTEYMKKAEARL 268
Query: 180 L 180
L
Sbjct: 269 L 269
Score = 58 (25.5 bits), Expect = 3.4e-23, Sum P(4) = 3.4e-23
Identities = 43/186 (23%), Positives = 79/186 (42%)
Query: 7 IEFDEGWEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMCSQNTPNNNS------ 60
I D+ W+ ++ GI ++ R+ + YM L+ +YN C+ +N +
Sbjct: 15 IGLDQIWDDLRAGIQQVYT-----RQS-MAKSRYMELYTHVYNYCTSVHQSNQARGAGVP 68
Query: 61 -ASCKRRNIPGFDEF-GLACFRDLVYDALKHKAKDAVIDERER--EQVDRALLANVLDI- 115
+ K+ PG +F GL ++ L + LK+ + + D + E V + D
Sbjct: 69 PSKSKKGQTPGGAQFVGLELYKRLK-EFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYR 127
Query: 116 FVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEE----CLKKERDRVSRYLQ---SNGE 168
F +L +Y +R +W+ ++ C + + E L RD + R L +N
Sbjct: 128 FSSKVLNGICAYLNR---HWVRRE-CDEGRKGIYEIYSLALVTWRDCLFRPLNKQVTNAV 183
Query: 169 EKLVEK 174
KL+EK
Sbjct: 184 LKLIEK 189
Score = 45 (20.9 bits), Expect = 7.1e-22, Sum P(4) = 7.1e-22
Identities = 8/13 (61%), Positives = 12/13 (92%)
Query: 16 IQKGIGKLKRILE 28
IQ G+G+LK++LE
Sbjct: 329 IQDGLGELKKLLE 341
Score = 41 (19.5 bits), Expect = 1.3e-13, Sum P(4) = 1.3e-13
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 147 KAEECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVY 183
K+ E L + D + + N EE +E ++++VV+
Sbjct: 417 KSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVF 453
>UNIPROTKB|E1C0W8 [details] [associations]
symbol:CUL1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006513 "protein monoubiquitination"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0009887 "organ
morphogenesis" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0006915
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511
GO:GO:0019005 SUPFAM:SSF75632 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 OMA:SGVINCY
EMBL:AADN02027289 EMBL:AADN02027286 EMBL:AADN02027287
EMBL:AADN02027288 IPI:IPI00590577 Ensembl:ENSGALT00000020252
Uniprot:E1C0W8
Length = 777
Score = 148 (57.2 bits), Expect = 2.9e-31, Sum P(4) = 2.9e-31
Identities = 46/170 (27%), Positives = 79/170 (46%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLN 368
Y KL R +F N+ F+K+L + +D S+ VL++G WP +S
Sbjct: 501 YTSKLQR--MFQDIGVSKDLNEQ-FKKHL--TNSEPLDLDFSIQVLSSGSWPFQQSCT-- 553
Query: 369 PIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAI 428
F LPS++ + + F FY ++ RKL+W+Y L + + L ST+ AI
Sbjct: 554 --FALPSELERSYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAI 611
Query: 429 LDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSILYYKILIKEPDTKSI 478
L +N + + Q+ + D L ++L L L K+L+ E + ++
Sbjct: 612 LLQYNTEDAYTVQQLTDSTQIKMDILAQVLQIL--LKSKLLVLEDENANV 659
Score = 137 (53.3 bits), Expect = 2.9e-31, Sum P(4) = 2.9e-31
Identities = 33/105 (31%), Positives = 56/105 (53%)
Query: 116 FVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKV 175
F L DT +Y+R ST ++ ++P +YM+KAE L +E+ RV YL + +++L K
Sbjct: 233 FESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKC 292
Query: 176 QHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG 220
+ ++L+ ++ E L +K +DL RMY I+ G
Sbjct: 293 E-QVLIEKHLEIFHTEFQN---LLDADKNEDLGRMYNLVSRIQDG 333
Score = 123 (48.4 bits), Expect = 2.9e-31, Sum P(4) = 2.9e-31
Identities = 40/108 (37%), Positives = 53/108 (49%)
Query: 222 HDNYMEYVTNCFMDHSLFQRALKEAFKIFCNK---TVGGFSSS---EQLATFCDNILKKS 275
H Y V + F + + F AL +A F N T SSS E LA +CD++LKKS
Sbjct: 375 HKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKS 434
Query: 276 GNEKLSDEA-IXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRS 322
K +EA + YI DKD+F +FY K LA+RL+ S
Sbjct: 435 S--KNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNS 480
Score = 109 (43.4 bits), Expect = 2.9e-31, Sum P(4) = 2.9e-31
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RKVL HQQL+ E + L FKP V KK I+ LI ++YLER +T+
Sbjct: 723 RKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTY 773
Score = 79 (32.9 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 30/129 (23%), Positives = 60/129 (46%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFW---PSYKSS 365
Y KK RLL ++ R +++ ++ R K I+ + + T F + K+
Sbjct: 261 YMKKAEARLLEEQRRVQVYLHESTQDELAR--KCEQVLIEKHLEIFHTEFQNLLDADKNE 318
Query: 366 DLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHIN-AKFELKNIELIISTY 424
DL ++NL S++ + K+ ET ++ L+ I G+ +N K ++ + + Y
Sbjct: 319 DLGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKY 378
Query: 425 HAAILDLFN 433
+A ++ FN
Sbjct: 379 NALVMSAFN 387
Score = 57 (25.1 bits), Expect = 4.3e-23, Sum P(4) = 4.3e-23
Identities = 43/198 (21%), Positives = 85/198 (42%)
Query: 7 IEFDEGWEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMCSQNTPNNNS------ 60
I D+ W+ ++ GI ++ R+ + YM L+ +YN C+ +N +
Sbjct: 15 IGLDQIWDDLRAGIQQVYT-----RQS-MAKSRYMELYTHVYNYCTSVHQSNQARGAGVP 68
Query: 61 -ASCKRRNIPGFDEF-GLACFRDLVYDALKHKAKDAVIDERER--EQVDRALLANVLDI- 115
+ K+ PG +F GL ++ L + LK+ + + D + E V + D
Sbjct: 69 PSKSKKGQTPGGAQFVGLELYKRLK-EFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYR 127
Query: 116 FVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEE----CLKKERDRVSRYLQSNGEEK- 170
F +L +Y +R +W+ ++ C + + E L RD + R L + K
Sbjct: 128 FSSKVLNGICAYLNR---HWVRRE-CDEGRKGIYEIYSLALVTWRDCLFRPLNKQVQNKC 183
Query: 171 LVEKVQHELLVVYATQLL 188
L++K + + + +QL+
Sbjct: 184 LLKKKKKKKAMRMLSQLI 201
Score = 45 (20.9 bits), Expect = 7.1e-22, Sum P(4) = 7.1e-22
Identities = 8/13 (61%), Positives = 12/13 (92%)
Query: 16 IQKGIGKLKRILE 28
IQ G+G+LK++LE
Sbjct: 330 IQDGLGELKKLLE 342
Score = 41 (19.5 bits), Expect = 1.3e-13, Sum P(4) = 1.3e-13
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 147 KAEECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVY 183
K+ E L + D + + N EE +E ++++VV+
Sbjct: 418 KSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVF 454
Score = 38 (18.4 bits), Expect = 1.7e-11, Sum P(3) = 1.7e-11
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 227 EYVTNCFMDH-----SLFQRALKEAFKIFCNKTVGGFSSSEQL 264
E VTNCF + S FQ A+ + TV + S Q+
Sbjct: 590 ELVTNCFKNRYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQI 632
>MGI|MGI:1918995 [details] [associations]
symbol:Cul2 "cullin 2" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0030891
"VCB complex" evidence=ISO] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031462 "Cul2-RING ubiquitin
ligase complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 MGI:MGI:1918995 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 GO:GO:0030163 GO:GO:0006511
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031462 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713
HOVERGEN:HBG106177 KO:K03870 OMA:VMLDYVE CTD:8453 OrthoDB:EOG4Z0B51
EMBL:AK016520 EMBL:AK160597 EMBL:BC026779 EMBL:BC027428
EMBL:BC025902 IPI:IPI00387216 IPI:IPI00387217 RefSeq:NP_083678.2
UniGene:Mm.291707 UniGene:Mm.443148 ProteinModelPortal:Q9D4H8
SMR:Q9D4H8 IntAct:Q9D4H8 STRING:Q9D4H8 PhosphoSite:Q9D4H8
PaxDb:Q9D4H8 PRIDE:Q9D4H8 Ensembl:ENSMUST00000025073
Ensembl:ENSMUST00000162301 GeneID:71745 KEGG:mmu:71745
UCSC:uc008dxz.2 InParanoid:Q9D4H8 NextBio:334387 Bgee:Q9D4H8
CleanEx:MM_CUL2 Genevestigator:Q9D4H8 GermOnline:ENSMUSG00000024231
Uniprot:Q9D4H8
Length = 745
Score = 173 (66.0 bits), Expect = 3.4e-31, Sum P(5) = 3.4e-31
Identities = 47/186 (25%), Positives = 86/186 (46%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNA-HAGIDLSVTVLATGFWPSYKSSDL 367
+ KL R+ D S + N+ F ++R GI + VL G WP ++
Sbjct: 469 FTSKL-HRMYTDMSVSADLNNK--FNNFIRNQDTVIDLGISFQIYVLQAGAWPLTQAP-- 523
Query: 368 NPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAA 427
+ F +P ++ K V++F+ FY RKL+W++ L + + K +++TY A
Sbjct: 524 SSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMA 583
Query: 428 ILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSILYYKILIKEPDTKSISRSDYFELN 487
+L FN S +SY ++ + +L + + SL L K++ + + + I F LN
Sbjct: 584 VLLAFNNSETVSYKELQDSTQMNEKELTKTIKSL--LDVKMINHDSEKEDIDAESSFSLN 641
Query: 488 SKFTDR 493
F+ +
Sbjct: 642 MSFSSK 647
Score = 133 (51.9 bits), Expect = 3.4e-31, Sum P(5) = 3.4e-31
Identities = 31/109 (28%), Positives = 54/109 (49%)
Query: 115 IFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEK 174
IFV L +T YY + ++N + + C YM K LK E R +YL + K++ +
Sbjct: 206 IFVSPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKVIHE 265
Query: 175 VQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG-PH 222
Q ++ + Q L E C ++ + + +D++ MY R + +G PH
Sbjct: 266 CQQRMVADHL-QFLHSE---CHSIIQQERKNDMANMYVLLRAVSSGLPH 310
Score = 120 (47.3 bits), Expect = 3.4e-31, Sum P(5) = 3.4e-31
Identities = 29/106 (27%), Positives = 50/106 (47%)
Query: 222 HDNYMEYVTNCFMDHSLFQRALKEAFKIFCN--KTVGGFSSSEQLATFCDNILKKSGNEK 279
H +++ + F AL +A N + + E LA +CDN+LKKS +
Sbjct: 347 HGKFVQLINTVLNGDQHFMSALDKALTSVVNYREPKSVCKAPELLAKYCDNLLKKSA-KG 405
Query: 280 LSDEAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRSRTL 325
+++ + YI DKD+F +FY + LA+RL+ S ++
Sbjct: 406 MTENEVEDKLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMSM 451
Score = 87 (35.7 bits), Expect = 3.4e-31, Sum P(5) = 3.4e-31
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLER 546
RKVL H L+ E I F P++ KK IE LI + Y+ER
Sbjct: 691 RKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIER 733
Score = 39 (18.8 bits), Expect = 2.8e-13, Sum P(4) = 2.8e-13
Identities = 15/39 (38%), Positives = 18/39 (46%)
Query: 168 EEKLVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDD 206
E K V K ELL Y LL+K G N+V+D
Sbjct: 380 EPKSVCKAP-ELLAKYCDNLLKKSAKG----MTENEVED 413
Score = 37 (18.1 bits), Expect = 3.4e-31, Sum P(5) = 3.4e-31
Identities = 5/9 (55%), Positives = 8/9 (88%)
Query: 5 RLIEFDEGW 13
R+++FDE W
Sbjct: 6 RVVDFDETW 14
Score = 37 (18.1 bits), Expect = 5.9e-12, Sum P(4) = 5.9e-12
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 454 LVRLLHSLSILYYKILIKEPDTKSISR 480
+VR++ + +L + LI+E ++S +R
Sbjct: 684 IVRIMKARKVLRHNALIQEVISQSRAR 710
>UNIPROTKB|F1N829 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031462 "Cul2-RING ubiquitin ligase complex"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031462 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:VMLDYVE EMBL:AADN02000467
EMBL:AADN02000468 EMBL:AADN02000469 IPI:IPI00822359
Ensembl:ENSGALT00000011487 ArrayExpress:F1N829 Uniprot:F1N829
Length = 747
Score = 176 (67.0 bits), Expect = 3.9e-31, Sum P(5) = 3.9e-31
Identities = 47/187 (25%), Positives = 89/187 (47%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNA--HAGIDLSVTVLATGFWPSYKSSD 366
+ KL R+ D S + N+ F +++ N++ GI + VL G WP ++
Sbjct: 471 FTSKL-HRMYTDMSVSADLNNK--FNNFIK-NQDTIIDLGISFQIYVLQAGAWPLTQAP- 525
Query: 367 LNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHA 426
+ F +P ++ K V++F+ FY RKL+W++ L + + K +++TY
Sbjct: 526 -SSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNYLCKPYVAMVTTYQM 584
Query: 427 AILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSILYYKILIKEPDTKSISRSDYFEL 486
A+L FN S +SY ++ + +L + + SL L K++ + D + + F L
Sbjct: 585 AVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSL--LDVKMINHDSDKEDVEAESTFSL 642
Query: 487 NSKFTDR 493
N F+ +
Sbjct: 643 NMNFSSK 649
Score = 130 (50.8 bits), Expect = 3.9e-31, Sum P(5) = 3.9e-31
Identities = 36/123 (29%), Positives = 58/123 (47%)
Query: 102 EQVDRAL-LANVLDIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVS 160
EQ + L L +IF L +T YY + ++N + + C YM K LK E R
Sbjct: 192 EQYKKKLPLKFYQEIFECPFLNETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEMRCR 251
Query: 161 RYLQSNGEEKLVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG 220
+YL + K++ + Q ++ + Q L E C + R K +D++ MY R + +G
Sbjct: 252 KYLHPSSYGKVIHECQQRMVADHL-QFLHAE---CHNIIRQEKRNDMANMYTLLRAVSSG 307
Query: 221 -PH 222
PH
Sbjct: 308 LPH 310
Score = 119 (46.9 bits), Expect = 3.9e-31, Sum P(5) = 3.9e-31
Identities = 29/108 (26%), Positives = 51/108 (47%)
Query: 222 HDNYMEYVTNCFMDHSLFQRALKEAFKIFCN----KTVGGFSSSEQLATFCDNILKKSGN 277
H +++ + F AL +A N K++ +LA +CDN+LKKS
Sbjct: 347 HSKFVQLINTVLNGDQHFMSALDKALTSVVNYREPKSICKAPELLELAKYCDNLLKKSA- 405
Query: 278 EKLSDEAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRSRTL 325
+ +++ + YI DKD+F +FY + LA+RL+ S ++
Sbjct: 406 KGMTENEVEDKLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMSM 453
Score = 87 (35.7 bits), Expect = 3.9e-31, Sum P(5) = 3.9e-31
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLER 546
RKVL H L+ E I F P++ KK IE LI + Y+ER
Sbjct: 693 RKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIER 735
Score = 37 (18.1 bits), Expect = 3.9e-31, Sum P(5) = 3.9e-31
Identities = 5/9 (55%), Positives = 8/9 (88%)
Query: 5 RLIEFDEGW 13
R+++FDE W
Sbjct: 7 RVVDFDETW 15
Score = 37 (18.1 bits), Expect = 1.6e-11, Sum P(4) = 1.6e-11
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 454 LVRLLHSLSILYYKILIKEPDTKSISR 480
+VR++ + +L + LI+E ++S +R
Sbjct: 686 IVRIMKARKVLRHNALIQEVISQSRAR 712
>UNIPROTKB|F1SAD7 [details] [associations]
symbol:CUL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
GO:GO:0006915 GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0009887 GO:GO:0006511 GO:GO:0019005 SUPFAM:SSF75632
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:SGVINCY EMBL:CU915471
EMBL:FP565440 Ensembl:ENSSSCT00000016837 Uniprot:F1SAD7
Length = 778
Score = 158 (60.7 bits), Expect = 4.5e-31, Sum P(4) = 4.5e-31
Identities = 46/170 (27%), Positives = 81/170 (47%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLN 368
Y KL R +F N+ F+K+L ++ + +D S+ VL++G WP +S
Sbjct: 500 YTSKLQR--MFQDIGVSKDLNEQ-FKKHLTNSEPLDSPVDFSIQVLSSGSWPFQQSCT-- 554
Query: 369 PIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAI 428
F LPS++ + + F FY ++ RKL+W+Y L + + L ST+ AI
Sbjct: 555 --FALPSELERSYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAI 612
Query: 429 LDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSILYYKILIKEPDTKSI 478
L +N + + Q+ + D L ++L L L K+L+ E + ++
Sbjct: 613 LLQYNTEDAYAVQQLTDSTQIKMDILAQVLQIL--LKSKLLVLEDENANV 660
Score = 137 (53.3 bits), Expect = 4.5e-31, Sum P(4) = 4.5e-31
Identities = 33/105 (31%), Positives = 56/105 (53%)
Query: 116 FVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKV 175
F L DT +Y+R ST ++ ++P +YM+KAE L +E+ RV YL + +++L K
Sbjct: 232 FESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKC 291
Query: 176 QHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG 220
+ ++L+ ++ E L +K +DL RMY I+ G
Sbjct: 292 E-QVLIEKHLEIFHTEFQN---LLDADKNEDLGRMYNLVSRIQDG 332
Score = 110 (43.8 bits), Expect = 4.5e-31, Sum P(4) = 4.5e-31
Identities = 37/101 (36%), Positives = 49/101 (48%)
Query: 222 HDNYMEYVTNCFMDHSLFQRALKEAFKIFCNK---TVGGFSSS---EQLATFCDNILKKS 275
H Y V + F + + F AL +A F N T SSS E LA +CD++LKKS
Sbjct: 374 HKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKS 433
Query: 276 GNEKLSDEA-IXXXXXXXXXXXXYISDKDLFAEFYRKKLAR 315
K +EA + YI DKD+F +FY K LA+
Sbjct: 434 S--KNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAK 472
Score = 109 (43.4 bits), Expect = 4.5e-31, Sum P(4) = 4.5e-31
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RKVL HQQL+ E + L FKP V KK I+ LI ++YLER +T+
Sbjct: 724 RKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTY 774
Score = 79 (32.9 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 30/129 (23%), Positives = 60/129 (46%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFW---PSYKSS 365
Y KK RLL ++ R +++ ++ R K I+ + + T F + K+
Sbjct: 260 YMKKAEARLLEEQRRVQVYLHESTQDELAR--KCEQVLIEKHLEIFHTEFQNLLDADKNE 317
Query: 366 DLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHIN-AKFELKNIELIISTY 424
DL ++NL S++ + K+ ET ++ L+ I G+ +N K ++ + + Y
Sbjct: 318 DLGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKY 377
Query: 425 HAAILDLFN 433
+A ++ FN
Sbjct: 378 NALVMSAFN 386
Score = 68 (29.0 bits), Expect = 5.1e-24, Sum P(4) = 5.1e-24
Identities = 27/121 (22%), Positives = 57/121 (47%)
Query: 65 RRNIPGFDEFGLACFRDLVYDALKHKAKDAVID--ERER--EQVDRALLANVLDIFVEHM 120
R+ I L +RD ++ L + +AV+ E+ER E ++ L++ V+ +VE
Sbjct: 153 RKGIYEIYSLALVTWRDCLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELG 212
Query: 121 LQDTSSYYSRISTNWILKDPCPD-YMRKAEECLKKERDRVSRYLQSNGEEKLVEKVQHEL 179
L + ++ ++ T + K+ ++ E +E + +LQ N + ++K + L
Sbjct: 213 LNEDDAF-AKGPTLTVYKESFESQFLADTERFYTRES---TEFLQQNPVTEYMKKAEARL 268
Query: 180 L 180
L
Sbjct: 269 L 269
Score = 58 (25.5 bits), Expect = 5.3e-23, Sum P(4) = 5.3e-23
Identities = 43/186 (23%), Positives = 79/186 (42%)
Query: 7 IEFDEGWEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMCSQNTPNNNS------ 60
I D+ W+ ++ GI ++ R+ + YM L+ +YN C+ +N +
Sbjct: 15 IGLDQIWDDLRAGIQQVYT-----RQS-MAKSRYMELYTHVYNYCTSVHQSNQARGAGVP 68
Query: 61 -ASCKRRNIPGFDEF-GLACFRDLVYDALKHKAKDAVIDERER--EQVDRALLANVLDI- 115
+ K+ PG +F GL ++ L + LK+ + + D + E V + D
Sbjct: 69 PSKSKKGQTPGGAQFVGLELYKRLK-EFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYR 127
Query: 116 FVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEE----CLKKERDRVSRYLQ---SNGE 168
F +L +Y +R +W+ ++ C + + E L RD + R L +N
Sbjct: 128 FSSKVLNGICAYLNR---HWVRRE-CDEGRKGIYEIYSLALVTWRDCLFRPLNKQVTNAV 183
Query: 169 EKLVEK 174
KL+EK
Sbjct: 184 LKLIEK 189
Score = 45 (20.9 bits), Expect = 1.1e-21, Sum P(4) = 1.1e-21
Identities = 8/13 (61%), Positives = 12/13 (92%)
Query: 16 IQKGIGKLKRILE 28
IQ G+G+LK++LE
Sbjct: 329 IQDGLGELKKLLE 341
Score = 41 (19.5 bits), Expect = 1.0e-14, Sum P(4) = 1.0e-14
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 147 KAEECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVY 183
K+ E L + D + + N EE +E ++++VV+
Sbjct: 417 KSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVF 453
>UNIPROTKB|Q5T2B7 [details] [associations]
symbol:CUL2 "Cullin-2" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
HOGENOM:HOG000176713 HOVERGEN:HBG106177 EMBL:AL392046
UniGene:Hs.82919 HGNC:HGNC:2552 ChiTaRS:CUL2 IPI:IPI00647073
SMR:Q5T2B7 Ensembl:ENST00000374754 Uniprot:Q5T2B7
Length = 688
Score = 170 (64.9 bits), Expect = 6.8e-31, Sum P(4) = 6.8e-31
Identities = 43/163 (26%), Positives = 79/163 (48%)
Query: 335 KYLRYNKNAHAGIDLSVT----VLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYET 390
K+ + KN IDL ++ VL G WP ++ + F +P ++ K V++F+ FY
Sbjct: 432 KFNNFIKNQDTVIDLGISFQIYVLQAGAWPLTQAP--SSTFAIPQELEKSVQMFELFYSQ 489
Query: 391 KTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLT 450
RKL+W++ L + + K +++TY A+L FN S +SY ++ +
Sbjct: 490 HFSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMN 549
Query: 451 HDDLVRLLHSLSILYYKILIKEPDTKSISRSDYFELNSKFTDR 493
+L + + SL L K++ + + + I F LN F+ +
Sbjct: 550 EKELTKTIKSL--LDVKMINHDSEKEDIDAESSFSLNMNFSSK 590
Score = 131 (51.2 bits), Expect = 6.8e-31, Sum P(4) = 6.8e-31
Identities = 32/110 (29%), Positives = 52/110 (47%)
Query: 114 DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVE 173
+IF L +T YY + ++N + + C YM K LK E R +YL + K++
Sbjct: 148 EIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKVIH 207
Query: 174 KVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG-PH 222
+ Q ++ + Q L E C + R K +D++ MY R + G PH
Sbjct: 208 ECQQRMVADHL-QFLHAE---CHNIIRQEKKNDMANMYVLLRAVSTGLPH 253
Score = 120 (47.3 bits), Expect = 6.8e-31, Sum P(4) = 6.8e-31
Identities = 29/106 (27%), Positives = 50/106 (47%)
Query: 222 HDNYMEYVTNCFMDHSLFQRALKEAFKIFCN--KTVGGFSSSEQLATFCDNILKKSGNEK 279
H +++ + F AL +A N + + E LA +CDN+LKKS +
Sbjct: 290 HGKFVQLINTVLNGDQHFMSALDKALTSVVNYREPKSVCKAPELLAKYCDNLLKKSA-KG 348
Query: 280 LSDEAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRSRTL 325
+++ + YI DKD+F +FY + LA+RL+ S ++
Sbjct: 349 MTENEVEDRLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMSM 394
Score = 87 (35.7 bits), Expect = 6.8e-31, Sum P(4) = 6.8e-31
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLER 546
RKVL H L+ E I F P++ KK IE LI + Y+ER
Sbjct: 634 RKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIER 676
Score = 41 (19.5 bits), Expect = 2.0e-13, Sum P(3) = 2.0e-13
Identities = 27/96 (28%), Positives = 40/96 (41%)
Query: 111 NVLDIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEK 170
N+ +FVE +L+ + I+T +L +M ++ L V Y E K
Sbjct: 277 NMPTLFVESVLEVHGKFVQLINT--VLNGD-QHFMSALDKALTS----VVNYR----EPK 325
Query: 171 LVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDD 206
V K ELL Y LL+K G N+V+D
Sbjct: 326 SVCKAP-ELLAKYCDNLLKKSAKG----MTENEVED 356
Score = 39 (18.8 bits), Expect = 1.7e-21, Sum P(4) = 1.7e-21
Identities = 10/53 (18%), Positives = 27/53 (50%)
Query: 78 CFRDLVYDALK--H-KAKDAVIDEREREQVDRALLANVLDIFVEHMLQDTSSY 127
C + +V D L+ H + + + E++ + + +L + + HM+Q+ ++
Sbjct: 209 CQQRMVADHLQFLHAECHNIIRQEKKNDMANMYVLLRAVSTGLPHMIQELQNH 261
Score = 37 (18.1 bits), Expect = 4.6e-12, Sum P(3) = 4.6e-12
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 454 LVRLLHSLSILYYKILIKEPDTKSISR 480
+VR++ + +L + LI+E ++S +R
Sbjct: 627 IVRIMKARKVLRHNALIQEVISQSRAR 653
>UNIPROTKB|E2QRU7 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031462 "Cul2-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031462 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K03870 OMA:VMLDYVE CTD:8453
EMBL:AAEX03001145 RefSeq:XP_535140.2 Ensembl:ENSCAFT00000005971
GeneID:477952 KEGG:cfa:477952 NextBio:20853352 Uniprot:E2QRU7
Length = 745
Score = 170 (64.9 bits), Expect = 7.5e-31, Sum P(5) = 7.5e-31
Identities = 43/163 (26%), Positives = 79/163 (48%)
Query: 335 KYLRYNKNAHAGIDLSVT----VLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYET 390
K+ + KN IDL ++ VL G WP ++ + F +P ++ K V++F+ FY
Sbjct: 489 KFNNFIKNQDTVIDLGISFQIYVLQAGAWPLTQAP--SSTFAIPQELEKSVQMFELFYSQ 546
Query: 391 KTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLT 450
RKL+W++ L + + K +++TY A+L FN S +SY ++ +
Sbjct: 547 HFSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMN 606
Query: 451 HDDLVRLLHSLSILYYKILIKEPDTKSISRSDYFELNSKFTDR 493
+L + + SL L K++ + + + I F LN F+ +
Sbjct: 607 EKELTKTIKSL--LDVKMINHDSEKEDIDTESSFSLNMNFSSK 647
Score = 133 (51.9 bits), Expect = 7.5e-31, Sum P(5) = 7.5e-31
Identities = 35/126 (27%), Positives = 58/126 (46%)
Query: 114 DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVE 173
+IF L +T YY + ++N + + C YM K LK E R +YL + K++
Sbjct: 205 EIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKVIH 264
Query: 174 KVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG-PHDNYMEYVTNC 232
+ Q ++ + Q L E C + R K +D++ MY R + G PH ++ + N
Sbjct: 265 ECQQRMVADHL-QFLHAE---CHNIIRQEKKNDMANMYVLLRAVSTGLPH--MIQELQNH 318
Query: 233 FMDHSL 238
D L
Sbjct: 319 IQDEGL 324
Score = 120 (47.3 bits), Expect = 7.5e-31, Sum P(5) = 7.5e-31
Identities = 29/106 (27%), Positives = 50/106 (47%)
Query: 222 HDNYMEYVTNCFMDHSLFQRALKEAFKIFCN--KTVGGFSSSEQLATFCDNILKKSGNEK 279
H +++ + F AL +A N + + E LA +CDN+LKKS +
Sbjct: 347 HGKFVQLINTVLNGDQHFMSALDKALTSVVNYREPKSVCKAPELLAKYCDNLLKKSA-KG 405
Query: 280 LSDEAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRSRTL 325
+++ + YI DKD+F +FY + LA+RL+ S ++
Sbjct: 406 MTENEVEDKLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMSM 451
Score = 87 (35.7 bits), Expect = 7.5e-31, Sum P(5) = 7.5e-31
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLER 546
RKVL H L+ E I F P++ KK IE LI + Y+ER
Sbjct: 691 RKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIER 733
Score = 41 (19.5 bits), Expect = 3.8e-13, Sum P(4) = 3.8e-13
Identities = 27/96 (28%), Positives = 40/96 (41%)
Query: 111 NVLDIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEK 170
N+ +FVE +L+ + I+T +L +M ++ L V Y E K
Sbjct: 334 NMPTLFVESVLEVHGKFVQLINT--VLNGD-QHFMSALDKALTS----VVNYR----EPK 382
Query: 171 LVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDD 206
V K ELL Y LL+K G N+V+D
Sbjct: 383 SVCKAP-ELLAKYCDNLLKKSAKG----MTENEVED 413
Score = 39 (18.8 bits), Expect = 2.3e-21, Sum P(5) = 2.3e-21
Identities = 10/53 (18%), Positives = 27/53 (50%)
Query: 78 CFRDLVYDALK--H-KAKDAVIDEREREQVDRALLANVLDIFVEHMLQDTSSY 127
C + +V D L+ H + + + E++ + + +L + + HM+Q+ ++
Sbjct: 266 CQQRMVADHLQFLHAECHNIIRQEKKNDMANMYVLLRAVSTGLPHMIQELQNH 318
Score = 37 (18.1 bits), Expect = 7.5e-31, Sum P(5) = 7.5e-31
Identities = 5/9 (55%), Positives = 8/9 (88%)
Query: 5 RLIEFDEGW 13
R+++FDE W
Sbjct: 6 RVVDFDETW 14
Score = 37 (18.1 bits), Expect = 5.9e-12, Sum P(4) = 5.9e-12
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 454 LVRLLHSLSILYYKILIKEPDTKSISR 480
+VR++ + +L + LI+E ++S +R
Sbjct: 684 IVRIMKARKVLRHNALIQEVISQSRAR 710
>UNIPROTKB|Q13617 [details] [associations]
symbol:CUL2 "Cullin-2" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IDA] [GO:0031462 "Cul2-RING ubiquitin
ligase complex" evidence=IDA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=TAS] [GO:0008285 "negative regulation
of cell proliferation" evidence=TAS] [GO:0097193 "intrinsic
apoptotic signaling pathway" evidence=TAS] [GO:0007050 "cell cycle
arrest" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=TAS] [GO:0061418 "regulation of transcription
from RNA polymerase II promoter in response to hypoxia"
evidence=TAS] [GO:0071456 "cellular response to hypoxia"
evidence=TAS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 Reactome:REACT_120956 GO:GO:0005829
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0008285 GO:GO:0005654
GO:GO:0000082 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007050
GO:GO:0016567 EMBL:CH471072 GO:GO:0006511 GO:GO:0097193
eggNOG:COG5647 SUPFAM:SSF75632 Pathway_Interaction_DB:hif1apathway
GO:GO:0061418 GO:GO:0031462 GO:GO:0031625 InterPro:IPR016159
SUPFAM:SSF74788 HOVERGEN:HBG106177 KO:K03870 OMA:VMLDYVE
EMBL:U83410 EMBL:AF126404 EMBL:AK095217 EMBL:AK300491 EMBL:AL392046
EMBL:BC009591 EMBL:BC110901 EMBL:U58088 IPI:IPI00014311
IPI:IPI00985090 RefSeq:NP_001185706.1 RefSeq:NP_001185707.1
RefSeq:NP_001185708.1 RefSeq:NP_003582.2 UniGene:Hs.82919
ProteinModelPortal:Q13617 SMR:Q13617 DIP:DIP-31612N IntAct:Q13617
MINT:MINT-1523339 STRING:Q13617 PhosphoSite:Q13617 DMDM:19863260
PaxDb:Q13617 PRIDE:Q13617 DNASU:8453 Ensembl:ENST00000374748
Ensembl:ENST00000374749 Ensembl:ENST00000374751
Ensembl:ENST00000537177 GeneID:8453 KEGG:hsa:8453 UCSC:uc001ixv.3
CTD:8453 GeneCards:GC10M035338 HGNC:HGNC:2552 HPA:CAB002677
HPA:HPA024578 MIM:603135 neXtProt:NX_Q13617 PharmGKB:PA27048
InParanoid:Q13617 OrthoDB:EOG4Z0B51 PhylomeDB:Q13617 ChiTaRS:CUL2
GenomeRNAi:8453 NextBio:31634 ArrayExpress:Q13617 Bgee:Q13617
CleanEx:HS_CUL2 Genevestigator:Q13617 GermOnline:ENSG00000108094
Uniprot:Q13617
Length = 745
Score = 170 (64.9 bits), Expect = 1.2e-30, Sum P(5) = 1.2e-30
Identities = 43/163 (26%), Positives = 79/163 (48%)
Query: 335 KYLRYNKNAHAGIDLSVT----VLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYET 390
K+ + KN IDL ++ VL G WP ++ + F +P ++ K V++F+ FY
Sbjct: 489 KFNNFIKNQDTVIDLGISFQIYVLQAGAWPLTQAP--SSTFAIPQELEKSVQMFELFYSQ 546
Query: 391 KTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLT 450
RKL+W++ L + + K +++TY A+L FN S +SY ++ +
Sbjct: 547 HFSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMN 606
Query: 451 HDDLVRLLHSLSILYYKILIKEPDTKSISRSDYFELNSKFTDR 493
+L + + SL L K++ + + + I F LN F+ +
Sbjct: 607 EKELTKTIKSL--LDVKMINHDSEKEDIDAESSFSLNMNFSSK 647
Score = 131 (51.2 bits), Expect = 1.2e-30, Sum P(5) = 1.2e-30
Identities = 32/110 (29%), Positives = 52/110 (47%)
Query: 114 DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVE 173
+IF L +T YY + ++N + + C YM K LK E R +YL + K++
Sbjct: 205 EIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKVIH 264
Query: 174 KVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG-PH 222
+ Q ++ + Q L E C + R K +D++ MY R + G PH
Sbjct: 265 ECQQRMVADHL-QFLHAE---CHNIIRQEKKNDMANMYVLLRAVSTGLPH 310
Score = 120 (47.3 bits), Expect = 1.2e-30, Sum P(5) = 1.2e-30
Identities = 29/106 (27%), Positives = 50/106 (47%)
Query: 222 HDNYMEYVTNCFMDHSLFQRALKEAFKIFCN--KTVGGFSSSEQLATFCDNILKKSGNEK 279
H +++ + F AL +A N + + E LA +CDN+LKKS +
Sbjct: 347 HGKFVQLINTVLNGDQHFMSALDKALTSVVNYREPKSVCKAPELLAKYCDNLLKKSA-KG 405
Query: 280 LSDEAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRSRTL 325
+++ + YI DKD+F +FY + LA+RL+ S ++
Sbjct: 406 MTENEVEDRLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMSM 451
Score = 87 (35.7 bits), Expect = 1.2e-30, Sum P(5) = 1.2e-30
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLER 546
RKVL H L+ E I F P++ KK IE LI + Y+ER
Sbjct: 691 RKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIER 733
Score = 41 (19.5 bits), Expect = 3.8e-13, Sum P(4) = 3.8e-13
Identities = 27/96 (28%), Positives = 40/96 (41%)
Query: 111 NVLDIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEK 170
N+ +FVE +L+ + I+T +L +M ++ L V Y E K
Sbjct: 334 NMPTLFVESVLEVHGKFVQLINT--VLNGD-QHFMSALDKALTS----VVNYR----EPK 382
Query: 171 LVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDD 206
V K ELL Y LL+K G N+V+D
Sbjct: 383 SVCKAP-ELLAKYCDNLLKKSAKG----MTENEVED 413
Score = 39 (18.8 bits), Expect = 2.3e-21, Sum P(5) = 2.3e-21
Identities = 10/53 (18%), Positives = 27/53 (50%)
Query: 78 CFRDLVYDALK--H-KAKDAVIDEREREQVDRALLANVLDIFVEHMLQDTSSY 127
C + +V D L+ H + + + E++ + + +L + + HM+Q+ ++
Sbjct: 266 CQQRMVADHLQFLHAECHNIIRQEKKNDMANMYVLLRAVSTGLPHMIQELQNH 318
Score = 37 (18.1 bits), Expect = 1.2e-30, Sum P(5) = 1.2e-30
Identities = 5/9 (55%), Positives = 8/9 (88%)
Query: 5 RLIEFDEGW 13
R+++FDE W
Sbjct: 6 RVVDFDETW 14
Score = 37 (18.1 bits), Expect = 9.8e-12, Sum P(4) = 9.8e-12
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 454 LVRLLHSLSILYYKILIKEPDTKSISR 480
+VR++ + +L + LI+E ++S +R
Sbjct: 684 IVRIMKARKVLRHNALIQEVISQSRAR 710
>RGD|1310644 [details] [associations]
symbol:Cul2 "cullin 2" species:10116 "Rattus norvegicus"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0030163 "protein catabolic process" evidence=ISO] [GO:0030891
"VCB complex" evidence=IDA] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031462 "Cul2-RING ubiquitin
ligase complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA;ISO] [GO:0032403 "protein complex binding"
evidence=IPI] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IC] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 RGD:1310644
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0030891
IPI:IPI00559025 PRIDE:D4AEE5 Ensembl:ENSRNOT00000021462
UCSC:RGD:1310644 ArrayExpress:D4AEE5 Uniprot:D4AEE5
Length = 706
Score = 207 (77.9 bits), Expect = 1.4e-30, Sum P(4) = 1.4e-30
Identities = 61/239 (25%), Positives = 110/239 (46%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNA-HAGIDLSVTVLATGFWPSYKSSDL 367
+ KL R+ D S + N+ F ++R GI + VL G WP ++
Sbjct: 469 FTSKL-HRMYTDMSVSADLNNK--FNNFIRNQDTVIDLGISFQIYVLQAGAWPLTQAP-- 523
Query: 368 NPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAA 427
+ F +P ++ K V++F+ FY RKL+W++ L + + K +++TY A
Sbjct: 524 SSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMA 583
Query: 428 ILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSILYYKILIKEPDTKSISRSDYFELN 487
+L FN S +SY ++ + +L + + SL L K++ + + + I F LN
Sbjct: 584 VLLAFNNSETVSYKELQDSTQMNEKELTKTIKSL--LDVKMINHDSEKEDIDAESSFSLN 641
Query: 488 SKFTDRMRGSRSLSHHRKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLER 546
F+ + + + +K Q++S+ F P++ KK IE LI + Y+ER
Sbjct: 642 MSFSSKRTKFKITTSMQK--DTPQVISQS----RARFNPSISMIKKCIEVLIDKQYIER 694
Score = 137 (53.3 bits), Expect = 1.4e-30, Sum P(4) = 1.4e-30
Identities = 32/109 (29%), Positives = 54/109 (49%)
Query: 115 IFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEK 174
IFV L +T YY + ++N + + C YM K LK E R +YL + K++ +
Sbjct: 206 IFVSPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKVIHE 265
Query: 175 VQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG-PH 222
Q ++ + Q L E C ++ R + +D++ MY R + +G PH
Sbjct: 266 CQQRMVADHL-QFLHSE---CHSIIRHERKNDMANMYVLLRAVSSGLPH 310
Score = 120 (47.3 bits), Expect = 1.4e-30, Sum P(4) = 1.4e-30
Identities = 29/106 (27%), Positives = 50/106 (47%)
Query: 222 HDNYMEYVTNCFMDHSLFQRALKEAFKIFCN--KTVGGFSSSEQLATFCDNILKKSGNEK 279
H +++ + F AL +A N + + E LA +CDN+LKKS +
Sbjct: 347 HGKFVQLINTVLNGDQHFMSALDKALTSVVNYREPKSVCKAPELLAKYCDNLLKKSA-KG 405
Query: 280 LSDEAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRSRTL 325
+++ + YI DKD+F +FY + LA+RL+ S ++
Sbjct: 406 MTENEVEDKLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMSM 451
Score = 39 (18.8 bits), Expect = 3.4e-12, Sum P(3) = 3.4e-12
Identities = 15/39 (38%), Positives = 18/39 (46%)
Query: 168 EEKLVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDD 206
E K V K ELL Y LL+K G N+V+D
Sbjct: 380 EPKSVCKAP-ELLAKYCDNLLKKSAKG----MTENEVED 413
Score = 37 (18.1 bits), Expect = 1.4e-30, Sum P(4) = 1.4e-30
Identities = 5/9 (55%), Positives = 8/9 (88%)
Query: 5 RLIEFDEGW 13
R+++FDE W
Sbjct: 6 RVVDFDETW 14
>UNIPROTKB|Q08DE9 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031462 "Cul2-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031462 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713
HOVERGEN:HBG106177 KO:K03870 OMA:VMLDYVE CTD:8453 OrthoDB:EOG4Z0B51
EMBL:DAAA02035372 EMBL:BC123787 EMBL:BC150023 IPI:IPI00704669
RefSeq:NP_001070377.1 UniGene:Bt.38802 STRING:Q08DE9
Ensembl:ENSBTAT00000055001 GeneID:535219 KEGG:bta:535219
InParanoid:Q08DE9 NextBio:20876664 Uniprot:Q08DE9
Length = 745
Score = 168 (64.2 bits), Expect = 2.1e-30, Sum P(5) = 2.1e-30
Identities = 43/163 (26%), Positives = 79/163 (48%)
Query: 335 KYLRYNKNAHAGIDLSVT----VLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYET 390
K+ + KN IDL ++ VL G WP ++ + F +P ++ K V++F+ FY
Sbjct: 489 KFNNFIKNQDTVIDLGISFQIYVLQAGAWPLTQAP--SSTFAIPQELEKSVQMFELFYSQ 546
Query: 391 KTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLT 450
RKL+W++ L + + K +++TY A+L FN S +SY ++ +
Sbjct: 547 HFSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMN 606
Query: 451 HDDLVRLLHSLSILYYKILIKEPDTKSISRSDYFELNSKFTDR 493
+L + + SL L K++ + + + I F LN F+ +
Sbjct: 607 EKELTKTIKSL--LDVKMINHDSEKEDIDVESSFSLNMNFSSK 647
Score = 131 (51.2 bits), Expect = 2.1e-30, Sum P(5) = 2.1e-30
Identities = 32/110 (29%), Positives = 52/110 (47%)
Query: 114 DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVE 173
+IF L +T YY + ++N + + C YM K LK E R +YL + K++
Sbjct: 205 EIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKVIH 264
Query: 174 KVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG-PH 222
+ Q ++ + Q L E C + R K +D++ MY R + G PH
Sbjct: 265 ECQQRMVADHL-QFLHAE---CHNIIRQEKKNDMANMYVLLRAVSTGLPH 310
Score = 120 (47.3 bits), Expect = 2.1e-30, Sum P(5) = 2.1e-30
Identities = 29/106 (27%), Positives = 50/106 (47%)
Query: 222 HDNYMEYVTNCFMDHSLFQRALKEAFKIFCN--KTVGGFSSSEQLATFCDNILKKSGNEK 279
H +++ + F AL +A N + + E LA +CDN+LKKS +
Sbjct: 347 HGKFVQLINTVLNGDQHFMSALDKALTSVVNYREPKSVCKAPELLAKYCDNLLKKSA-KG 405
Query: 280 LSDEAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRSRTL 325
+++ + YI DKD+F +FY + LA+RL+ S ++
Sbjct: 406 MTENEVEDKLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMSM 451
Score = 87 (35.7 bits), Expect = 2.1e-30, Sum P(5) = 2.1e-30
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLER 546
RKVL H L+ E I F P++ KK IE LI + Y+ER
Sbjct: 691 RKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIER 733
Score = 41 (19.5 bits), Expect = 6.4e-13, Sum P(4) = 6.4e-13
Identities = 27/96 (28%), Positives = 40/96 (41%)
Query: 111 NVLDIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEK 170
N+ +FVE +L+ + I+T +L +M ++ L V Y E K
Sbjct: 334 NMPTLFVESVLEVHGKFVQLINT--VLNGD-QHFMSALDKALTS----VVNYR----EPK 382
Query: 171 LVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDD 206
V K ELL Y LL+K G N+V+D
Sbjct: 383 SVCKAP-ELLAKYCDNLLKKSAKG----MTENEVED 413
Score = 39 (18.8 bits), Expect = 3.9e-21, Sum P(5) = 3.9e-21
Identities = 10/53 (18%), Positives = 27/53 (50%)
Query: 78 CFRDLVYDALK--H-KAKDAVIDEREREQVDRALLANVLDIFVEHMLQDTSSY 127
C + +V D L+ H + + + E++ + + +L + + HM+Q+ ++
Sbjct: 266 CQQRMVADHLQFLHAECHNIIRQEKKNDMANMYVLLRAVSTGLPHMIQELQNH 318
Score = 37 (18.1 bits), Expect = 2.1e-30, Sum P(5) = 2.1e-30
Identities = 5/9 (55%), Positives = 8/9 (88%)
Query: 5 RLIEFDEGW 13
R+++FDE W
Sbjct: 6 RVVDFDETW 14
Score = 37 (18.1 bits), Expect = 9.8e-12, Sum P(4) = 9.8e-12
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 454 LVRLLHSLSILYYKILIKEPDTKSISR 480
+VR++ + +L + LI+E ++S +R
Sbjct: 684 IVRIMKARKVLRHNALIQEVISQSRAR 710
>UNIPROTKB|Q5T2B5 [details] [associations]
symbol:CUL2 "Cullin-2" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176713
HOVERGEN:HBG106177 EMBL:AL392046 UniGene:Hs.82919 HGNC:HGNC:2552
ChiTaRS:CUL2 IPI:IPI00642151 SMR:Q5T2B5 Ensembl:ENST00000374742
Ensembl:ENST00000374746 Uniprot:Q5T2B5
Length = 706
Score = 204 (76.9 bits), Expect = 1.3e-29, Sum P(4) = 1.3e-29
Identities = 57/216 (26%), Positives = 103/216 (47%)
Query: 335 KYLRYNKNAHAGIDLSVT----VLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYET 390
K+ + KN IDL ++ VL G WP ++ + F +P ++ K V++F+ FY
Sbjct: 489 KFNNFIKNQDTVIDLGISFQIYVLQAGAWPLTQAP--SSTFAIPQELEKSVQMFELFYSQ 546
Query: 391 KTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLT 450
RKL+W++ L + + K +++TY A+L FN S +SY ++ +
Sbjct: 547 HFSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMN 606
Query: 451 HDDLVRLLHSLSILYYKILIKEPDTKSISRSDYFELNSKFTDRMRGSRSLSHHRKVLGHQ 510
+L + + SL L K++ + + + I F LN F+ + + + +K
Sbjct: 607 EKELTKTIKSL--LDVKMINHDSEKEDIDAESSFSLNMNFSSKRTKFKITTSMQK--DTP 662
Query: 511 QLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLER 546
Q++S+ F P++ KK IE LI + Y+ER
Sbjct: 663 QVISQS----RARFNPSISMIKKCIEVLIDKQYIER 694
Score = 131 (51.2 bits), Expect = 1.3e-29, Sum P(4) = 1.3e-29
Identities = 32/110 (29%), Positives = 52/110 (47%)
Query: 114 DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVE 173
+IF L +T YY + ++N + + C YM K LK E R +YL + K++
Sbjct: 205 EIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKVIH 264
Query: 174 KVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG-PH 222
+ Q ++ + Q L E C + R K +D++ MY R + G PH
Sbjct: 265 ECQQRMVADHL-QFLHAE---CHNIIRQEKKNDMANMYVLLRAVSTGLPH 310
Score = 120 (47.3 bits), Expect = 1.3e-29, Sum P(4) = 1.3e-29
Identities = 29/106 (27%), Positives = 50/106 (47%)
Query: 222 HDNYMEYVTNCFMDHSLFQRALKEAFKIFCN--KTVGGFSSSEQLATFCDNILKKSGNEK 279
H +++ + F AL +A N + + E LA +CDN+LKKS +
Sbjct: 347 HGKFVQLINTVLNGDQHFMSALDKALTSVVNYREPKSVCKAPELLAKYCDNLLKKSA-KG 405
Query: 280 LSDEAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRSRTL 325
+++ + YI DKD+F +FY + LA+RL+ S ++
Sbjct: 406 MTENEVEDRLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMSM 451
Score = 41 (19.5 bits), Expect = 4.5e-12, Sum P(3) = 4.5e-12
Identities = 27/96 (28%), Positives = 40/96 (41%)
Query: 111 NVLDIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEK 170
N+ +FVE +L+ + I+T +L +M ++ L V Y E K
Sbjct: 334 NMPTLFVESVLEVHGKFVQLINT--VLNGD-QHFMSALDKALTS----VVNYR----EPK 382
Query: 171 LVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDD 206
V K ELL Y LL+K G N+V+D
Sbjct: 383 SVCKAP-ELLAKYCDNLLKKSAKG----MTENEVED 413
Score = 39 (18.8 bits), Expect = 3.0e-20, Sum P(4) = 3.0e-20
Identities = 10/53 (18%), Positives = 27/53 (50%)
Query: 78 CFRDLVYDALK--H-KAKDAVIDEREREQVDRALLANVLDIFVEHMLQDTSSY 127
C + +V D L+ H + + + E++ + + +L + + HM+Q+ ++
Sbjct: 266 CQQRMVADHLQFLHAECHNIIRQEKKNDMANMYVLLRAVSTGLPHMIQELQNH 318
Score = 37 (18.1 bits), Expect = 1.3e-29, Sum P(4) = 1.3e-29
Identities = 5/9 (55%), Positives = 8/9 (88%)
Query: 5 RLIEFDEGW 13
R+++FDE W
Sbjct: 6 RVVDFDETW 14
>ZFIN|ZDB-GENE-030131-8032 [details] [associations]
symbol:cul2 "cullin 2" species:7955 "Danio rerio"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0001944 "vasculature development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 ZFIN:ZDB-GENE-030131-8032
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009790 GO:GO:0006511
GO:GO:0001944 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:BX294164
IPI:IPI00998382 Ensembl:ENSDART00000013257 ArrayExpress:F1Q690
Bgee:F1Q690 Uniprot:F1Q690
Length = 764
Score = 161 (61.7 bits), Expect = 5.0e-29, Sum P(5) = 5.0e-29
Identities = 47/187 (25%), Positives = 85/187 (45%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNA-HAGIDLSVTVLATGFWP-SYKSSD 366
+ KL R+ D S + N+ F +++ + GI + VL G WP ++ S
Sbjct: 488 FTSKL-HRMYTDMSVSTDLNNK--FNNFIKTQETVVDLGISFQIYVLQAGAWPLTHVPSS 544
Query: 367 LNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHA 426
F +P ++ K V++F+ FY RKL+W++ L + + K +++TY
Sbjct: 545 T---FAIPQELEKSVQMFELFYNQHFSGRKLTWLHYLCTGEVKMNYLSKPYVAVVTTYQM 601
Query: 427 AILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSILYYKILIKEPDTKSISRSDYFEL 486
A+L FN S +SY ++ + +L + + SL L K++ + + I F L
Sbjct: 602 AVLLAFNNSETVSYKELQDSTQMNEKELQKTIKSL--LDVKMISHDLQKEEIEPESTFSL 659
Query: 487 NSKFTDR 493
FT +
Sbjct: 660 IMSFTSK 666
Score = 133 (51.9 bits), Expect = 5.0e-29, Sum P(5) = 5.0e-29
Identities = 33/110 (30%), Positives = 52/110 (47%)
Query: 114 DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVE 173
+IF L T YY + ++N + + C YM K LK E R +YL + K++
Sbjct: 224 EIFEGPFLTKTGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEVRCRKYLHPSSYSKVIH 283
Query: 174 KVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG-PH 222
+ Q ++ + Q L E C + R K DD++ MY R + +G PH
Sbjct: 284 ECQQRMVADHL-QFLHGE---CQNIIRQEKRDDMANMYTLLRAVSSGLPH 329
Score = 113 (44.8 bits), Expect = 5.0e-29, Sum P(5) = 5.0e-29
Identities = 28/106 (26%), Positives = 49/106 (46%)
Query: 222 HDNYMEYVTNCFMDHSLFQRALKEAFKIFCN--KTVGGFSSSEQLATFCDNILKKSGNEK 279
H +++ + F AL +A N + + E LA +CDN+LKKS +
Sbjct: 366 HSKFVQLINTVLNGDQHFMSALDKALTSVVNYREPKSICKAPELLAKYCDNLLKKSA-KG 424
Query: 280 LSDEAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRSRTL 325
+++ + YI DKD+F + Y + LA+RL+ S ++
Sbjct: 425 MTENEVEDKLTSFITVFKYIDDKDVFQKIYARMLAKRLIHGLSLSM 470
Score = 87 (35.7 bits), Expect = 5.0e-29, Sum P(5) = 5.0e-29
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLER 546
RKVL H L+ E I F P++ KK IE LI + Y+ER
Sbjct: 710 RKVLRHNALIQEVINQSKARFNPSISMIKKCIEVLIDKQYIER 752
Score = 45 (20.9 bits), Expect = 1.7e-12, Sum P(4) = 1.7e-12
Identities = 33/127 (25%), Positives = 53/127 (41%)
Query: 83 VYDALKHKAKDAVI---DEREREQVDRALLANVLDIFVEHMLQDTSSYYSRISTNWILKD 139
V L H ++ + DE R ++ + N+ +FVE +L+ S + I+T +L
Sbjct: 323 VSSGLPHMIQELQVHIHDEGIRATINLSQ-ENMPTLFVESVLEVHSKFVQLINT--VLNG 379
Query: 140 PCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVYATQLLEKEQSGCGALF 199
+M ++ L V Y E K + K ELL Y LL+K G
Sbjct: 380 D-QHFMSALDKALTS----VVNYR----EPKSICKAP-ELLAKYCDNLLKKSAKG----M 425
Query: 200 RGNKVDD 206
N+V+D
Sbjct: 426 TENEVED 432
Score = 37 (18.1 bits), Expect = 5.0e-29, Sum P(5) = 5.0e-29
Identities = 5/9 (55%), Positives = 8/9 (88%)
Query: 5 RLIEFDEGW 13
R+++FDE W
Sbjct: 25 RVVDFDETW 33
>POMBASE|SPAC17G6.12 [details] [associations]
symbol:cul1 "cullin 1" species:4896 "Schizosaccharomyces
pombe" [GO:0005829 "cytosol" evidence=IDA] [GO:0007346 "regulation
of mitotic cell cycle" evidence=IC] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IDA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IMP] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IC] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 PomBase:SPAC17G6.12 GO:GO:0005829 GO:GO:0007346
EMBL:CU329670 GO:GO:0051301 GenomeReviews:CU329670_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007049 GO:GO:0019005
SUPFAM:SSF75632 GO:GO:0032876 GO:GO:0042787 InterPro:IPR016159
SUPFAM:SSF74788 HOGENOM:HOG000176713 KO:K03347 OMA:SGVINCY
OrthoDB:EOG4W3WW4 EMBL:AB016896 EMBL:AB027897 PIR:T37844 PIR:T43398
RefSeq:NP_594259.1 ProteinModelPortal:O13790 IntAct:O13790
MINT:MINT-3377010 STRING:O13790 EnsemblFungi:SPAC17G6.12.1
GeneID:2542393 KEGG:spo:SPAC17G6.12 NextBio:20803452 Uniprot:O13790
Length = 767
Score = 167 (63.8 bits), Expect = 6.8e-29, Sum P(5) = 6.8e-29
Identities = 47/160 (29%), Positives = 83/160 (51%)
Query: 343 AHAG-IDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIY 401
+ AG ID S VL T FWP +++N F+LP +++ E F+ +Y + RKLSW++
Sbjct: 522 SRAGNIDFSALVLGTSFWP-LSPNNVN--FHLPEELVPLYEGFQNYYYSCHNGRKLSWLF 578
Query: 402 SLGQCHINAKFELK-NIELI--ISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLVRLL 458
L + I A+ + N+ + +STY +L L+N + +Y ++ L+ D L +L
Sbjct: 579 HLSKGEIKARINPQTNVTYVFQVSTYQMGVLLLYNHRDSYTYEELAKITGLSTDFLTGIL 638
Query: 459 HSLSILYYKILIKEPDTKSISRSDYFELNSKFTDRMRGSR 498
+ L K+L+ + K + +++N F RM+ R
Sbjct: 639 NIF--LKAKVLLLGDNDKLGDPNSTYKINENF--RMKKIR 674
Score = 121 (47.7 bits), Expect = 6.8e-29, Sum P(5) = 6.8e-29
Identities = 44/156 (28%), Positives = 70/156 (44%)
Query: 227 EYVTNCFMDHSLFQRALKEAFKIFCNKTV----GGFSSSEQLATFCDNILKKSGNEKLSD 282
E V F + F ++L AF+ N+ V S E LA + D+IL+KS N+ +
Sbjct: 376 ELVNTAFHGDTDFTKSLDTAFRELVNRNVVCQRSSSRSPELLAKYADSILRKS-NKNVDI 434
Query: 283 EAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRSRT-------LAR-KNQTGFE 334
+ + Y+ DKD+F FY K LA+RL+ S + L++ K GFE
Sbjct: 435 DDVEDCLSSIIIIFRYVEDKDVFQNFYTKLLAKRLVNGTSNSQDAESSMLSKLKEVCGFE 494
Query: 335 KYLRYNKNAHAGIDLSVTVLATGFW--PSYKSSDLN 368
Y + I LS + FW P ++ +++
Sbjct: 495 -YTSKLQRMFQDISLSQEI-TEAFWQLPQSRAGNID 528
Score = 104 (41.7 bits), Expect = 6.8e-29, Sum P(5) = 6.8e-29
Identities = 25/113 (22%), Positives = 60/113 (53%)
Query: 100 EREQVDRALLANVLDIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRV 159
++ + + L++ F + +++T ++Y++ S+ ++ DY++KAE L +E + V
Sbjct: 209 DKTDMTKPNLSSYKTFFETNFIENTKNFYAKESSEYLASHSITDYLKKAEIRLAEEEELV 268
Query: 160 SRYLQSNGEEKLVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYR 212
YL + + L+E + ++L+ ++L + + + N +D+ RMYR
Sbjct: 269 RLYLHESTLKPLLEATE-DVLIAQHEEVLHNDFA---RMLDQNCSEDIIRMYR 317
Score = 78 (32.5 bits), Expect = 6.8e-29, Sum P(5) = 6.8e-29
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLER 546
R+ L H LV E I+ + F P V K+ I+ LI ++YLER
Sbjct: 715 RRTLKHVVLVKETIDQIKSRFTPKVSDIKQCIDMLIEKEYLER 757
Score = 59 (25.8 bits), Expect = 6.8e-29, Sum P(5) = 6.8e-29
Identities = 21/96 (21%), Positives = 46/96 (47%)
Query: 13 WEYIQKGIGKL-KRILEGLREPPFSSEEYMALHITIYNMCSQNTPNNNSASCKRRNIPGF 71
W++++ G+ ++ +R+ EG+ + +YM L+ I+N C+ + + + N
Sbjct: 24 WDFLKTGVSQIFERLDEGM-----TITKYMELYTAIHNYCADAS---KTITVDNFNDQTA 75
Query: 72 DEFGLACFRDLV-Y--DALKHKAKDAVIDEREREQV 104
+ G A + +LV Y + L K+ + EQ+
Sbjct: 76 NVLGEALYNNLVLYLEEYLARLRKECISQTNHEEQL 111
>DICTYBASE|DDB_G0292794 [details] [associations]
symbol:culD "cullin D" species:44689 "Dictyostelium
discoideum" [GO:0005634 "nucleus" evidence=IDA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0031461
"cullin-RING ubiquitin ligase complex" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
dictyBase:DDB_G0292794 GO:GO:0005634 GenomeReviews:CM000155_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 EMBL:AAFI02000196
InterPro:IPR016159 SUPFAM:SSF74788 KO:K10609 HSSP:Q9JLV5
OMA:FEDSLDF RefSeq:XP_629469.1 ProteinModelPortal:Q54CS2 SMR:Q54CS2
STRING:Q54CS2 EnsemblProtists:DDB0266743 GeneID:8628859
KEGG:ddi:DDB_G0292794 ProtClustDB:CLSZ2429365 Uniprot:Q54CS2
Length = 802
Score = 136 (52.9 bits), Expect = 1.0e-28, Sum P(4) = 1.0e-28
Identities = 44/156 (28%), Positives = 70/156 (44%)
Query: 347 IDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQC 406
I++++ VL +G WP + LP + ++ EVF +FY +K + L W +L C
Sbjct: 529 IEMNIYVLTSGNWPIQPPIEAT----LPKEFLEYQEVFNKFYLSKHNGKTLKWQNALSYC 584
Query: 407 HINAKFELKNIELIISTYHAAILDLFNA---SNRLSYSQVITQLNLTHDDLVRLLHSLSI 463
+ A F EL +S + IL LFN LS+ + L +L + L SL
Sbjct: 585 VLKANFIQGKKELSVSLFQTIILYLFNDVIDGGELSFRDIQANTGLAIPELKKNLLSLCS 644
Query: 464 LYYKILIKEPDTKSISRSDYFELNSKFTDRMRGSRS 499
ILI++ + S + S +S + GS S
Sbjct: 645 SKSDILIQKKSSTSSNTSS--NTSSNTSSSASGSAS 678
Score = 132 (51.5 bits), Expect = 1.0e-28, Sum P(4) = 1.0e-28
Identities = 34/108 (31%), Positives = 56/108 (51%)
Query: 223 DNYMEYVTNCFMDHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSGNEKLSD 282
D ++ F + L ALKE+F+ F N +E +A F D+ LK G +++S+
Sbjct: 379 DRLDRILSQSFSKNELLTYALKESFEYFINTKQN--KPAELVARFIDSKLKVGG-KRMSE 435
Query: 283 EAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRSRTL-ARKN 329
E + YI KD+F FY++ L++RLL D+S ++ A K+
Sbjct: 436 EELETVLNKSLILFRYIQGKDVFEAFYKQDLSKRLLLDKSTSIDAEKS 483
Score = 127 (49.8 bits), Expect = 1.0e-28, Sum P(4) = 1.0e-28
Identities = 31/129 (24%), Positives = 73/129 (56%)
Query: 98 EREREQVDRALLANV------LDIFVE---HMLQDTSSYYSRISTNWILKDPCPDYMRKA 148
ERE +++DR L+ ++ L+I+ + +++T+ +Y + I + P Y++
Sbjct: 214 EREGDEIDRDLIHSLVKMLSSLNIYTKFEIEFIKETNRFYDMEGNSKINEIETPMYLKYV 273
Query: 149 EECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLS 208
E L +E +R+ RYL+ + +++L+ + +L+ + +LEK G A+ G++++DL
Sbjct: 274 CERLNQEGERLMRYLEQSTKKQLMAVLDRQLIERHVDVILEK---GFNAMVNGDRLEDLG 330
Query: 209 RMYRFYRTI 217
++Y+ ++
Sbjct: 331 KLYQLLNSV 339
Score = 99 (39.9 bits), Expect = 1.0e-28, Sum P(4) = 1.0e-28
Identities = 24/47 (51%), Positives = 29/47 (61%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPEN 550
RK L H L+SE + LL F+P KKRIE LI ++YL R PEN
Sbjct: 750 RKTLAHNLLISELVSLL--KFQPKPVDLKKRIEILIEKEYLCRDPEN 794
Score = 46 (21.3 bits), Expect = 1.6e-19, Sum P(4) = 1.6e-19
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 475 TKSISRSDYFELNSKFTDRM 494
TK I +D F NSKF+ ++
Sbjct: 688 TKVIDETDTFLFNSKFSSKL 707
>UNIPROTKB|K7GPT4 [details] [associations]
symbol:LOC100739075 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 SUPFAM:SSF75632
GeneTree:ENSGT00550000074299 EMBL:CU468368
Ensembl:ENSSSCT00000035259 Uniprot:K7GPT4
Length = 278
Score = 238 (88.8 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 52/162 (32%), Positives = 85/162 (52%)
Query: 333 FEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKT 392
F++Y++ N+N I+L+V +L G+WP+Y +++ LP +M+K E+FK FY K
Sbjct: 27 FKQYMQ-NQNVPGNIELTVNILTMGYWPTYVPMEVH----LPPEMVKLQEIFKTFYLGKH 81
Query: 393 KHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHD 452
RKL W +LG C + A+F+ EL +S + +L +FN S ++ +
Sbjct: 82 SGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDG 141
Query: 453 DLVRLLHSLSILYYKILIKEPDTKSISRSDYFELNSKFTDRM 494
+L R L SL+ ++L K P K I D F N F ++
Sbjct: 142 ELRRTLQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKL 183
Score = 112 (44.5 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 27/51 (52%), Positives = 30/51 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK L H LVSE L KPA KKRIE LI +DY+ER ENPN +
Sbjct: 226 RKTLSHNLLVSEVYNQLKFPVKPA--DLKKRIESLIDRDYMERDKENPNQY 274
>DICTYBASE|DDB_G0291972 [details] [associations]
symbol:culA "cullin A" species:44689 "Dictyostelium
discoideum" [GO:0030587 "sorocarp development" evidence=IMP]
[GO:0030154 "cell differentiation" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006935 "chemotaxis"
evidence=IMP] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=ISS] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 dictyBase:DDB_G0291972 GO:GO:0030154
GenomeReviews:CM000155_GR GO:GO:0000082 EMBL:AAFI02000187
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0030587 GO:GO:0006935
GO:GO:0006511 GO:GO:0019005 GO:GO:0004842 eggNOG:COG5647
SUPFAM:SSF75632 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03347
OMA:SGVINCY EMBL:AF020287 RefSeq:XP_629756.1 HSSP:Q13616
ProteinModelPortal:O60999 SMR:O60999 STRING:O60999
EnsemblProtists:DDB0185191 GeneID:8628431 KEGG:ddi:DDB_G0291972
ProtClustDB:CLSZ2429454 Uniprot:O60999
Length = 770
Score = 199 (75.1 bits), Expect = 2.7e-28, Sum P(4) = 2.7e-28
Identities = 57/190 (30%), Positives = 95/190 (50%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLN 368
Y KL +R+ D S L+R+ F ++ + + ID SV VLATG WP S N
Sbjct: 491 YTSKL-QRMFTDMS--LSRELLDRFNNHIEQVERSSLNIDFSVLVLATGSWPLQPPST-N 546
Query: 369 PIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKF---ELKNIELIISTYH 425
F++P ++ C ++F++FY+ + RKL+W++ L + + K+ L STY
Sbjct: 547 --FSIPKELQACEQLFQKFYQNQHSGRKLNWLHHLSKGELKTKYLQTSKSGYTLQCSTYQ 604
Query: 426 AAILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSILYYKILIKEP--DTKSISRSDY 483
+L FN L+ ++ L L L SL+ KIL+ +P D + I+++
Sbjct: 605 IGVLLQFNQYETLTSEEIQESTQLIDSVLKGTLTSLA--KSKILLADPPLDDEEIAKTTK 662
Query: 484 FELNSKFTDR 493
F LN +F ++
Sbjct: 663 FSLNKQFKNK 672
Score = 139 (54.0 bits), Expect = 2.7e-28, Sum P(4) = 2.7e-28
Identities = 49/193 (25%), Positives = 82/193 (42%)
Query: 101 REQVDRALLANVLDIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVS 160
RE+ +L F E L T +YY+ S +I ++ DYM+K E L +E RV
Sbjct: 208 REKPKETILQVYKSGFEELFLTATENYYTNESAKFISENSVADYMKKVETRLNEEVKRVQ 267
Query: 161 RYLQSNGEEKLVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG 220
+YL N E +L+ K + L+ + + + Q+ L +K+ DL+RMY I G
Sbjct: 268 QYLHQNTESELIAKCEKVLIEKHVEVIWNEFQT----LLEKDKIPDLTRMYSLLSRIPRG 323
Query: 221 PH------DNYMEYV---------TNCFMDHSLFQRALKEAFKIFCNKTVGGFSSSEQLA 265
+ +++ V TN ++ ++ L + FK + G F S
Sbjct: 324 LEPLRTTLEKHVQNVGLQAVSSIATNGVIEPKVYIETLLKVFKKYNELVTGAFRSDTGFV 383
Query: 266 TFCDNILKKSGNE 278
D ++ NE
Sbjct: 384 ASLDKACRRFINE 396
Score = 128 (50.1 bits), Expect = 3.5e-27, Sum P(4) = 3.5e-27
Identities = 39/104 (37%), Positives = 51/104 (49%)
Query: 225 YMEYVTNCFMDHSLFQRALKEAFKIFCNK---TVGGFSSS---EQLATFCDNILKKSGNE 278
Y E VT F + F +L +A + F N+ T+ SSS E LA F D +LKKS N
Sbjct: 368 YNELVTGAFRSDTGFVASLDKACRRFINENAVTIAAKSSSKSPELLARFTDFLLKKSPNN 427
Query: 279 KLSDEAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRS 322
E + YI DKD+F +FY K LA+RL+ S
Sbjct: 428 PEESE-MEQLLNDVMIVFKYIEDKDVFQDFYSKMLAKRLIHGTS 470
Score = 79 (32.9 bits), Expect = 2.7e-28, Sum P(4) = 2.7e-28
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLER 546
RK L H L++E I L F P V KK I+ LI ++YL R
Sbjct: 716 RKQLAHSGLMTEVISQLQTRFNPKVNIIKKCIDILIEKEYLMR 758
Score = 65 (27.9 bits), Expect = 2.7e-28, Sum P(4) = 2.7e-28
Identities = 19/101 (18%), Positives = 50/101 (49%)
Query: 4 RRLIEFDEGWEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMCSQNTPNNNS-AS 62
+R ++ D+ W +++GI K I+ L + F ++++AL+ +Y+ C+ + +++
Sbjct: 10 KRSVKLDDIWPELEEGIYK---IITDLNKG-FPKQKWIALYTHVYDYCAASQSKSSAKVG 65
Query: 63 CKRRNIPGFDEFGLACFRDLVYDALKHKAKDAVIDEREREQ 103
++ G + G + L KH ++ + E + ++
Sbjct: 66 MPKQQASGANYVGEDLYNRLNLFLKKHMSQLLKLTETKMDE 106
Score = 49 (22.3 bits), Expect = 1.2e-26, Sum P(4) = 1.2e-26
Identities = 13/46 (28%), Positives = 27/46 (58%)
Query: 76 LACFRDLVYDALKHKAKDAVID--ERERE--QVDRALLANVLDIFV 117
L +RD ++ LK + ++++D E ER Q++ L+ V++ +V
Sbjct: 157 LVIWRDCLFTPLKQRLTNSLLDIIESERNGYQINTHLIKGVINGYV 202
>WB|WBGene00000838 [details] [associations]
symbol:cul-3 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0035046 "pronuclear migration"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0044254 "multicellular organismal protein
catabolic process" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0008340 GO:GO:0009792
GO:GO:0035046 GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176712 KO:K03869
OMA:ATFYGPI EMBL:U58085 EMBL:FO081768 RefSeq:NP_503151.1
ProteinModelPortal:Q17391 SMR:Q17391 IntAct:Q17391 MINT:MINT-274347
STRING:Q17391 PaxDb:Q17391 PRIDE:Q17391 EnsemblMetazoa:Y108G3AL.1.1
EnsemblMetazoa:Y108G3AL.1.2 GeneID:178547 KEGG:cel:CELE_Y108G3AL.1
UCSC:Y108G3AL.1.1 CTD:34896 WormBase:Y108G3AL.1 InParanoid:Q17391
NextBio:901580 GO:GO:0044254 Uniprot:Q17391
Length = 777
Score = 135 (52.6 bits), Expect = 1.3e-27, Sum P(5) = 1.3e-27
Identities = 28/106 (26%), Positives = 54/106 (50%)
Query: 114 DIFVEHMLQDTSSYYSRISTNWIL--KDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKL 171
D F +L++TS YY + NW+ D C Y+ + E + E R SRYL E K+
Sbjct: 201 DEFERPLLKETSDYYRDVCKNWLSGDNDAC-FYLAQVEIAMHDEASRASRYLDKMTEAKI 259
Query: 172 VEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTI 217
++ + ++ + ++ + G + K++DL+R++R ++ I
Sbjct: 260 LQVMDDVMVAEHIQTIVYMQNGGVKFMLEHKKIEDLTRIFRIFKRI 305
Score = 112 (44.5 bits), Expect = 1.3e-27, Sum P(5) = 1.3e-27
Identities = 28/100 (28%), Positives = 51/100 (51%)
Query: 223 DNYMEYVTNCFMDHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSGNEKLSD 282
D + +T F D F+ + F+ F N S E +A + D++L+ SG + +SD
Sbjct: 356 DYFSSLLTTAFADDRDFKNRFQHDFETFLNSNR---QSPEFVALYMDDMLR-SGLKCVSD 411
Query: 283 EAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRS 322
+ Y+ +KD+F +++++ LA+RLL D+S
Sbjct: 412 AEMDNKLDNVMILFRYLQEKDVFEKYFKQYLAKRLLLDKS 451
Score = 97 (39.2 bits), Expect = 1.3e-27, Sum P(5) = 1.3e-27
Identities = 26/82 (31%), Positives = 40/82 (48%)
Query: 331 TGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYET 390
T F + R + ID+S+ VL G WP+ + NP+ LP ++ E+F ++Y
Sbjct: 491 TSFRDW-REAQPTKMSIDISLRVLTAGVWPTVQC---NPVV-LPQELSVAYEMFTQYYTE 545
Query: 391 KTKHRKLSWIYSLGQCHINAKF 412
K RKL+ LG + A F
Sbjct: 546 KHTGRKLTINTLLGNADVKATF 567
Score = 93 (37.8 bits), Expect = 1.3e-27, Sum P(5) = 1.3e-27
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 419 LIISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSI--LYYKILIKEPDTK 476
L ++T+ IL FN NR+S Q++ +L + +L R L SL++ +IL+++ K
Sbjct: 601 LQVNTHQMIILLQFNHHNRISCQQLMDELKIPERELKRNLQSLALGKASQRILVRKNKGK 660
Query: 477 -SISRSDYFELNSKFTDRM 494
+I SD F +N F ++
Sbjct: 661 DAIDMSDEFAVNDNFQSKL 679
Score = 84 (34.6 bits), Expect = 1.3e-27, Sum P(5) = 1.3e-27
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLER 546
RK L H LV+E + L F P+ K+RIE LI ++YL R
Sbjct: 723 RKKLNHNNLVAEVTQQLRHRFMPSPIIIKQRIETLIEREYLAR 765
Score = 39 (18.8 bits), Expect = 9.0e-22, Sum P(5) = 9.0e-22
Identities = 13/50 (26%), Positives = 23/50 (46%)
Query: 325 LARKNQTGFEKYLRYNKNAHAGIDLSV-TVLATG-----FWPSYKSSDLN 368
L ++ +E + +Y H G L++ T+L F+P K+S N
Sbjct: 528 LPQELSVAYEMFTQYYTEKHTGRKLTINTLLGNADVKATFYPPPKASMSN 577
Score = 38 (18.4 bits), Expect = 4.8e-10, Sum P(4) = 4.8e-10
Identities = 8/25 (32%), Positives = 17/25 (68%)
Query: 88 KHKAKDAVIDEREREQVDRALLANV 112
++ AK ++D+ + V++ALLA +
Sbjct: 440 QYLAKRLLLDKSCSDDVEKALLAKL 464
>UNIPROTKB|Q17391 [details] [associations]
symbol:cul-3 "Cullin-3" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0035046
GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176712 KO:K03869 OMA:ATFYGPI EMBL:U58085
EMBL:FO081768 RefSeq:NP_503151.1 ProteinModelPortal:Q17391
SMR:Q17391 IntAct:Q17391 MINT:MINT-274347 STRING:Q17391
PaxDb:Q17391 PRIDE:Q17391 EnsemblMetazoa:Y108G3AL.1.1
EnsemblMetazoa:Y108G3AL.1.2 GeneID:178547 KEGG:cel:CELE_Y108G3AL.1
UCSC:Y108G3AL.1.1 CTD:34896 WormBase:Y108G3AL.1 InParanoid:Q17391
NextBio:901580 GO:GO:0044254 Uniprot:Q17391
Length = 777
Score = 135 (52.6 bits), Expect = 1.3e-27, Sum P(5) = 1.3e-27
Identities = 28/106 (26%), Positives = 54/106 (50%)
Query: 114 DIFVEHMLQDTSSYYSRISTNWIL--KDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKL 171
D F +L++TS YY + NW+ D C Y+ + E + E R SRYL E K+
Sbjct: 201 DEFERPLLKETSDYYRDVCKNWLSGDNDAC-FYLAQVEIAMHDEASRASRYLDKMTEAKI 259
Query: 172 VEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTI 217
++ + ++ + ++ + G + K++DL+R++R ++ I
Sbjct: 260 LQVMDDVMVAEHIQTIVYMQNGGVKFMLEHKKIEDLTRIFRIFKRI 305
Score = 112 (44.5 bits), Expect = 1.3e-27, Sum P(5) = 1.3e-27
Identities = 28/100 (28%), Positives = 51/100 (51%)
Query: 223 DNYMEYVTNCFMDHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSGNEKLSD 282
D + +T F D F+ + F+ F N S E +A + D++L+ SG + +SD
Sbjct: 356 DYFSSLLTTAFADDRDFKNRFQHDFETFLNSNR---QSPEFVALYMDDMLR-SGLKCVSD 411
Query: 283 EAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRS 322
+ Y+ +KD+F +++++ LA+RLL D+S
Sbjct: 412 AEMDNKLDNVMILFRYLQEKDVFEKYFKQYLAKRLLLDKS 451
Score = 97 (39.2 bits), Expect = 1.3e-27, Sum P(5) = 1.3e-27
Identities = 26/82 (31%), Positives = 40/82 (48%)
Query: 331 TGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYET 390
T F + R + ID+S+ VL G WP+ + NP+ LP ++ E+F ++Y
Sbjct: 491 TSFRDW-REAQPTKMSIDISLRVLTAGVWPTVQC---NPVV-LPQELSVAYEMFTQYYTE 545
Query: 391 KTKHRKLSWIYSLGQCHINAKF 412
K RKL+ LG + A F
Sbjct: 546 KHTGRKLTINTLLGNADVKATF 567
Score = 93 (37.8 bits), Expect = 1.3e-27, Sum P(5) = 1.3e-27
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 419 LIISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSI--LYYKILIKEPDTK 476
L ++T+ IL FN NR+S Q++ +L + +L R L SL++ +IL+++ K
Sbjct: 601 LQVNTHQMIILLQFNHHNRISCQQLMDELKIPERELKRNLQSLALGKASQRILVRKNKGK 660
Query: 477 -SISRSDYFELNSKFTDRM 494
+I SD F +N F ++
Sbjct: 661 DAIDMSDEFAVNDNFQSKL 679
Score = 84 (34.6 bits), Expect = 1.3e-27, Sum P(5) = 1.3e-27
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLER 546
RK L H LV+E + L F P+ K+RIE LI ++YL R
Sbjct: 723 RKKLNHNNLVAEVTQQLRHRFMPSPIIIKQRIETLIEREYLAR 765
Score = 39 (18.8 bits), Expect = 9.0e-22, Sum P(5) = 9.0e-22
Identities = 13/50 (26%), Positives = 23/50 (46%)
Query: 325 LARKNQTGFEKYLRYNKNAHAGIDLSV-TVLATG-----FWPSYKSSDLN 368
L ++ +E + +Y H G L++ T+L F+P K+S N
Sbjct: 528 LPQELSVAYEMFTQYYTEKHTGRKLTINTLLGNADVKATFYPPPKASMSN 577
Score = 38 (18.4 bits), Expect = 4.8e-10, Sum P(4) = 4.8e-10
Identities = 8/25 (32%), Positives = 17/25 (68%)
Query: 88 KHKAKDAVIDEREREQVDRALLANV 112
++ AK ++D+ + V++ALLA +
Sbjct: 440 QYLAKRLLLDKSCSDDVEKALLAKL 464
>ASPGD|ASPL0000014731 [details] [associations]
symbol:culC species:162425 "Emericella nidulans"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0016874
Gene3D:1.10.10.10 InterPro:IPR011991 EMBL:BN001302 GO:GO:0006511
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
OMA:ATFYGPI EnsemblFungi:CADANIAT00004755 Uniprot:C8V637
Length = 823
Score = 168 (64.2 bits), Expect = 1.7e-27, Sum P(5) = 1.7e-27
Identities = 54/185 (29%), Positives = 88/185 (47%)
Query: 321 RSRTLARKNQTGFEKYLRYNKNAHAG-IDLSVTVLATGFWP-SYKSSDLNPIFNLPSQMI 378
R T++ +++++R + +L + VL + WP SS + LP +
Sbjct: 534 RDMTISEDLTASYKQFVREQGDPDKKRFELDINVLTSTMWPMEIMSSSRDGQVELPCIIP 593
Query: 379 KCVEV----FKRFYETKTKHRKLSWIYSLGQCHINAKFELKN-----IELIISTYHAAIL 429
K VE F++FY K RKLSW S+G I A F N EL +STY IL
Sbjct: 594 KEVETVKQSFEKFYLDKHSGRKLSWQPSMGTADIKATFHRSNGKVQRHELNVSTYAMFIL 653
Query: 430 DLFN---ASNRLSYSQVITQLNLTHDDLVRLLHSLSIL-YYKILIKEPDTKSISRSDYFE 485
LFN L++ ++ + + +DL+R L SL++ ++L K P ++ + +D F
Sbjct: 654 LLFNDIPIGESLTFEEIQARTRIPDNDLIRNLQSLAVAPKTRVLKKVPMSRDVKPTDKFY 713
Query: 486 LNSKF 490
N+ F
Sbjct: 714 FNNDF 718
Score = 124 (48.7 bits), Expect = 1.7e-27, Sum P(5) = 1.7e-27
Identities = 34/100 (34%), Positives = 47/100 (47%)
Query: 231 NCFMDHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSGNEKLSDEAIXXXXX 290
+ F + Q A+ +F F N T SSE L+ F D LKK K +D +
Sbjct: 417 DAFGSDQVLQSAITASFSSFLNSTP---RSSEFLSLFFDENLKKGVKGK-TDNEVDALLE 472
Query: 291 XXXXXXXYISDKDLFAEFYRKKLARRLLFDRSRTLARKNQ 330
YI DKD F +Y+K L+RRLL RS ++ + Q
Sbjct: 473 NGITLLRYIKDKDRFEAYYKKHLSRRLLMKRSMSMDAERQ 512
Score = 116 (45.9 bits), Expect = 1.7e-27, Sum P(5) = 1.7e-27
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK L H L+SE + L F P V K+RIE LI ++YLER E+P T+
Sbjct: 769 RKTLIHSNLISEVLSQLSARFVPDVNMVKRRIESLIDREYLERVSEDPPTY 819
Score = 65 (27.9 bits), Expect = 1.7e-27, Sum P(5) = 1.7e-27
Identities = 16/75 (21%), Positives = 38/75 (50%)
Query: 152 LKKERDRVSRYLQSNGEEKLVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMY 211
+ +E++R + E K+ E V +EL+ +++ E +G + +++D+LS++Y
Sbjct: 270 IAEEKERCQYTISLLSESKIKEIVDNELIRNNLAEVVNFEGTGVRVMLDHDRIDNLSKIY 329
Query: 212 RFYRTIRAGPHDNYM 226
+ R P ++
Sbjct: 330 AL--SARVDPKKTHL 342
Score = 44 (20.5 bits), Expect = 1.7e-27, Sum P(5) = 1.7e-27
Identities = 19/78 (24%), Positives = 33/78 (42%)
Query: 82 LVYDALKHKAKDAVIDEREREQVDRALLANVLDIFVEHMLQDTSSYYSRISTNWILKDPC 141
+V D LK + ER +DRAL+ + + + L +T + S+ L
Sbjct: 180 VVADVLKSTVLFMIQLERSGHMIDRALIHSCIKML--EGLYETEA--EEESSKLYLTSFE 235
Query: 142 PDYMRKAEECLKKERDRV 159
PDY+ + + E R+
Sbjct: 236 PDYLEASAAFYRAEGKRL 253
>UNIPROTKB|F1RUR7 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031462 "Cul2-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031462 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:SECINYL EMBL:CU914378
Ensembl:ENSSSCT00000012151 Uniprot:F1RUR7
Length = 510
Score = 170 (64.9 bits), Expect = 1.3e-26, Sum P(4) = 1.3e-26
Identities = 43/163 (26%), Positives = 79/163 (48%)
Query: 335 KYLRYNKNAHAGIDLSVT----VLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYET 390
K+ + KN IDL ++ VL G WP ++ + F +P ++ K V++F+ FY
Sbjct: 254 KFNNFIKNQDTVIDLGISFQIYVLQAGAWPLTQAP--SSTFAIPQELEKSVQMFELFYSQ 311
Query: 391 KTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLT 450
RKL+W++ L + + K +++TY A+L FN S +SY ++ +
Sbjct: 312 HFSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMN 371
Query: 451 HDDLVRLLHSLSILYYKILIKEPDTKSISRSDYFELNSKFTDR 493
+L + + SL L K++ + + + I F LN F+ +
Sbjct: 372 EKELTKTIKSL--LDVKMINHDSEKEDIDAESSFSLNMNFSSK 412
Score = 120 (47.3 bits), Expect = 1.3e-26, Sum P(4) = 1.3e-26
Identities = 29/106 (27%), Positives = 50/106 (47%)
Query: 222 HDNYMEYVTNCFMDHSLFQRALKEAFKIFCN--KTVGGFSSSEQLATFCDNILKKSGNEK 279
H +++ + F AL +A N + + E LA +CDN+LKKS +
Sbjct: 112 HGKFVQLINTVLNGDQHFMSALDKALTSVVNYREPKSVCKAPELLAKYCDNLLKKSA-KG 170
Query: 280 LSDEAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRSRTL 325
+++ + YI DKD+F +FY + LA+RL+ S ++
Sbjct: 171 MTENEVEDKLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMSM 216
Score = 87 (35.7 bits), Expect = 1.3e-26, Sum P(4) = 1.3e-26
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLER 546
RKVL H L+ E I F P++ KK IE LI + Y+ER
Sbjct: 456 RKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIER 498
Score = 81 (33.6 bits), Expect = 1.3e-26, Sum P(4) = 1.3e-26
Identities = 23/79 (29%), Positives = 36/79 (45%)
Query: 145 MRKAEECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVYATQLLEKEQSGCGALFRGNKV 204
M K LK E R +YL + K++ + Q ++ + Q L E C + R K
Sbjct: 1 MEKVLGRLKDEEIRCRKYLHPSSYTKVIHECQQRMVADHL-QFLHAE---CHNIIRQEKK 56
Query: 205 DDLSRMYRFYRTIRAG-PH 222
+D++ MY R + G PH
Sbjct: 57 NDMANMYVLLRAVSTGLPH 75
Score = 41 (19.5 bits), Expect = 4.9e-14, Sum P(3) = 4.9e-14
Identities = 27/96 (28%), Positives = 40/96 (41%)
Query: 111 NVLDIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEK 170
N+ +FVE +L+ + I+T +L +M ++ L V Y E K
Sbjct: 99 NMPTLFVESVLEVHGKFVQLINT--VLNGD-QHFMSALDKALTS----VVNYR----EPK 147
Query: 171 LVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDD 206
V K ELL Y LL+K G N+V+D
Sbjct: 148 SVCKAP-ELLAKYCDNLLKKSAKG----MTENEVED 178
Score = 39 (18.8 bits), Expect = 2.5e-22, Sum P(4) = 2.5e-22
Identities = 10/53 (18%), Positives = 27/53 (50%)
Query: 78 CFRDLVYDALK--H-KAKDAVIDEREREQVDRALLANVLDIFVEHMLQDTSSY 127
C + +V D L+ H + + + E++ + + +L + + HM+Q+ ++
Sbjct: 31 CQQRMVADHLQFLHAECHNIIRQEKKNDMANMYVLLRAVSTGLPHMIQELQNH 83
Score = 37 (18.1 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 454 LVRLLHSLSILYYKILIKEPDTKSISR 480
+VR++ + +L + LI+E ++S +R
Sbjct: 449 IVRIMKARKVLRHNALIQEVISQSRAR 475
>POMBASE|SPAC24H6.03 [details] [associations]
symbol:cul3 "cullin 3" species:4896 "Schizosaccharomyces
pombe" [GO:0005829 "cytosol" evidence=IDA] [GO:0007346 "regulation
of mitotic cell cycle" evidence=IC] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=ISS] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IC]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
PomBase:SPAC24H6.03 GO:GO:0005829 GO:GO:0007346 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0019005 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0042787
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 KO:K03869
EMBL:AB017028 PIR:S62405 PIR:T38359 PIR:T43406 RefSeq:NP_592949.1
ProteinModelPortal:Q09760 IntAct:Q09760 STRING:Q09760
EnsemblFungi:SPAC24H6.03.1 GeneID:2542637 KEGG:spo:SPAC24H6.03
OMA:DEFRQHI OrthoDB:EOG48H0BR NextBio:20803686 Uniprot:Q09760
Length = 785
Score = 210 (79.0 bits), Expect = 2.4e-26, Sum P(4) = 2.4e-26
Identities = 51/160 (31%), Positives = 85/160 (53%)
Query: 341 KNAHAGIDLSVTVLATGFWPSYKSSDLNPI---FNLPSQMIKCVEVFKRFYETKTKHRKL 397
++A +DL+V++LA+ FWP DL+P N P ++ ++ F FY +K RKL
Sbjct: 531 QSAKPALDLNVSILASTFWPI----DLSPHKIKCNFPKVLLAQIDQFTDFYLSKHTGRKL 586
Query: 398 SWIYSLGQCHINAKFELKNIELIISTYHAAILDLFN--ASNR-LSYSQVITQLNLTHDDL 454
W S+G + F+ + +L +ST + IL LF N+ L + +++ + N+ DL
Sbjct: 587 LWYPSMGSADVRVNFKDRKYDLNVSTIASVILLLFQDLKENQCLIFEEILEKTNIEVGDL 646
Query: 455 VRLLHSLSILYYKILIKEPDTKSISRSDYFELNSKFTDRM 494
R L SL+ YKIL+K+P + ++ D F N F +
Sbjct: 647 KRNLQSLACAKYKILLKDPKGREVNAGDKFYFNENFVSNL 686
Score = 114 (45.2 bits), Expect = 2.4e-26, Sum P(4) = 2.4e-26
Identities = 36/153 (23%), Positives = 68/153 (44%)
Query: 115 IFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEK 174
+F L T ++Y S+ I +Y++KAE+ ++E++R YL + L+
Sbjct: 227 LFAPKFLSYTRNFYEIESSTVIGVFGVVEYLKKAEKRFEEEKERSKNYLFTKIASPLLSV 286
Query: 175 VQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAGPHDNYMEYVTNCFM 234
V+ ELL + LLE + +G ++ + + L +Y + + G + +Y+
Sbjct: 287 VEDELLSKHLDDLLENQSTGFFSMIDSSNFEGLQLVYESFSRVELGVK-SLKKYLAKYVA 345
Query: 235 DHS-LFQRALKEAFKIFCNKTVGGFSSSEQLAT 266
H L +A + VG SS+ +AT
Sbjct: 346 HHGKLINETTSQALE--GKMAVGRLSSNATMAT 376
Score = 102 (41.0 bits), Expect = 4.0e-25, Sum P(4) = 4.0e-25
Identities = 28/89 (31%), Positives = 49/89 (55%)
Query: 235 DHSLFQRALKEAFKIFCNKTVGGFSSS-EQLATFCDNILKKSGNEKLSDEAIXXXXXXXX 293
D S+ +L +AF F V G++ + E ++ F D+ LKK + + + +I
Sbjct: 400 DRSILN-SLSDAFVTF----VDGYTRAPEYISLFIDDNLKKDARKAI-EGSIEATLQNSV 453
Query: 294 XXXXYISDKDLFAEFYRKKLARRLLFDRS 322
+IS+KD+F ++Y+ LA+RLL +RS
Sbjct: 454 TLFRFISEKDVFEKYYKTHLAKRLLNNRS 482
Score = 97 (39.2 bits), Expect = 2.4e-26, Sum P(4) = 2.4e-26
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPEN 550
RKV H QL++E L F P+ K+RIE LI ++YL+R +N
Sbjct: 731 RKVCEHNQLMAEVTRQLNPRFHPSPMMIKRRIEALIEREYLQRQADN 777
Score = 41 (19.5 bits), Expect = 2.4e-26, Sum P(4) = 2.4e-26
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 7 IEFDEGWEYIQKGIGKL 23
++F WE +Q+ IG +
Sbjct: 20 VDFATHWEVLQRAIGDI 36
>POMBASE|SPAC3A11.08 [details] [associations]
symbol:pcu4 "cullin 4" species:4896 "Schizosaccharomyces
pombe" [GO:0000070 "mitotic sister chromatid segregation"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006283 "transcription-coupled nucleotide-excision repair"
evidence=IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0007535 "donor selection" evidence=TAS]
[GO:0008156 "negative regulation of DNA replication" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0030702 "chromatin silencing at centromere" evidence=IMP]
[GO:0031048 "chromatin silencing by small RNA" evidence=IMP]
[GO:0031060 "regulation of histone methylation" evidence=IMP]
[GO:0031507 "heterochromatin assembly" evidence=IMP] [GO:0031618
"nuclear centromeric heterochromatin" evidence=TAS] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0032876
"negative regulation of DNA endoreduplication" evidence=IMP]
[GO:0034613 "cellular protein localization" evidence=IMP]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IGI] [GO:0043494 "CLRC
ubiquitin ligase complex" evidence=IDA] [GO:0045836 "positive
regulation of meiosis" evidence=IGI] [GO:0051570 "regulation of
histone H3-K9 methylation" evidence=IMP] [GO:0008180 "signalosome"
evidence=IDA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 PomBase:SPAC3A11.08 GO:GO:0005829 EMBL:CU329670
GO:GO:0034613 GenomeReviews:CU329670_GR Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 GO:GO:0030466 GO:GO:0000122
GO:GO:0030702 GO:GO:0000070 GO:GO:0006348 GO:GO:0031048
GO:GO:0051570 GO:GO:0004842 GO:GO:0045836 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0032876 GO:GO:0042787 GO:GO:0031507
GO:GO:0031618 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0006283
GO:GO:0007535 KO:K10609 GO:GO:0043494 EMBL:AB017029 EMBL:AB027893
PIR:T43408 RefSeq:NP_594195.1 ProteinModelPortal:O14122
IntAct:O14122 STRING:O14122 EnsemblFungi:SPAC3A11.08.1
GeneID:2543116 KEGG:spo:SPAC3A11.08 OMA:EREDNDI OrthoDB:EOG4DNJCJ
NextBio:20804143 Uniprot:O14122
Length = 734
Score = 248 (92.4 bits), Expect = 1.4e-25, Sum P(4) = 1.4e-25
Identities = 61/166 (36%), Positives = 87/166 (52%)
Query: 333 FEKYLRYNKNAH-AGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETK 391
F R++K AH DL V VL+ +WPSY S + LP M + ++ F++FY +K
Sbjct: 478 FTSSFRHSKAAHNLHRDLYVNVLSQAYWPSYPESHIR----LPDDMQQDLDCFEKFYLSK 533
Query: 392 TKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFN---ASNRLSYSQVITQLN 448
+K+SW SLG C + A+F L N EL IS + A +L FN +SY +
Sbjct: 534 QVGKKISWYASLGHCIVKARFPLGNKELSISLFQACVLLQFNNCLGGEGISYQDLKKSTE 593
Query: 449 LTHDDLVRLLHSLSILYYKILIKEPDTKSISRSDYFELNSKFTDRM 494
L+ DL R L SLS + L+ P +K S F +N KFTD++
Sbjct: 594 LSDIDLTRTLQSLSCARIRPLVMVPKSKKPSPDTMFYVNEKFTDKL 639
Score = 91 (37.1 bits), Expect = 1.4e-25, Sum P(4) = 1.4e-25
Identities = 23/96 (23%), Positives = 45/96 (46%)
Query: 229 VTNCFMDHSLFQRALKEAFKIFCNKTVGGF--SSSEQLATFCDNILKKSGNEKLSDEAIX 286
V F+ A+++AF+ F N G + + +A + D +L+ G + + +
Sbjct: 346 VDESFLHDETLSYAMRKAFETFINGAKGSQREAPARLIAKYIDYLLRV-GEQASGGKPLK 404
Query: 287 XXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRS 322
YI+ KD+F +Y+ +A+RLL ++S
Sbjct: 405 EVFSEILDLFRYIASKDIFEAYYKLDIAKRLLLNKS 440
Score = 54 (24.1 bits), Expect = 1.4e-25, Sum P(4) = 1.4e-25
Identities = 18/73 (24%), Positives = 33/73 (45%)
Query: 115 IFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEK 174
+FV L S +Y S+ I + P +Y+ A L++E V ++ ++ + E
Sbjct: 202 VFVPMYLVMLSRFYDTESSQKIQELPLEEYLEYAMSSLEREDAYVEKFDIVRDKKSIRET 261
Query: 175 VQHELLVVYATQL 187
VQ L+ + L
Sbjct: 262 VQRCLITSHLDTL 274
Score = 54 (24.1 bits), Expect = 1.4e-25, Sum P(4) = 1.4e-25
Identities = 20/79 (25%), Positives = 33/79 (41%)
Query: 476 KSISRSDYFELNSKFTDRMRGSRSLSHHRKVLGHQQLVSECIELLGRMFKPAVKAFKKRI 535
+ + R FEL + M+ ++ + H LV I + P V K I
Sbjct: 661 EQVVRDRQFELQASIVRVMK-------QKEKMKHDDLVQYVINNVKDRGIPLVSDVKTAI 713
Query: 536 EGLISQDYLERYPENPNTF 554
E L+ ++YLER + T+
Sbjct: 714 EKLLEKEYLEREDNDIYTY 732
>ZFIN|ZDB-GENE-030131-2603 [details] [associations]
symbol:cul1a "cullin 1a" species:7955 "Danio
rerio" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-030131-2603 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 HOVERGEN:HBG106177 HSSP:Q9JLV5 EMBL:BC045445
IPI:IPI00495948 UniGene:Dr.76883 ProteinModelPortal:Q7ZVR2
SMR:Q7ZVR2 STRING:Q7ZVR2 InParanoid:Q7ZVR2 ArrayExpress:Q7ZVR2
Uniprot:Q7ZVR2
Length = 777
Score = 151 (58.2 bits), Expect = 5.9e-25, Sum P(4) = 5.9e-25
Identities = 47/175 (26%), Positives = 82/175 (46%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLN 368
Y KL R +F N+ F+K+L + +D S+ VL++G WP +S
Sbjct: 501 YTSKLQR--MFQDIGVSKDLNEQ-FKKHL--TNSEPLDLDFSIQVLSSGSWPFQQSCT-- 553
Query: 369 PIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAI 428
F LPS++ + + F FY ++ RKL+W+Y L + + L ST+ AI
Sbjct: 554 --FALPSELERSYQRFTAFYASRHSGRKLTWLYHLSKGELVTNCFKNRYTLQASTFQMAI 611
Query: 429 LDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSILYYKILIKEPDTKSISRSDY 483
L +N + + Q+ + D LV++L L L K+L+ E + ++ ++
Sbjct: 612 LLQYNTEDVYTVQQLTDSTQIKIDILVQVLQIL--LKSKLLVLEDENANVDEVEF 664
Score = 135 (52.6 bits), Expect = 3.6e-23, Sum P(3) = 3.6e-23
Identities = 33/107 (30%), Positives = 56/107 (52%)
Query: 114 DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVE 173
+ F L DT +Y+R ST ++ ++P +YM+KAE L +E+ RV YL + +++L
Sbjct: 231 EYFETQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELAR 290
Query: 174 KVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG 220
K + ++L+ ++ E L +K +DL RMY I G
Sbjct: 291 KCE-QVLIEKHLEIFHTEFQN---LLDADKNEDLGRMYNLVSRITDG 333
Score = 130 (50.8 bits), Expect = 5.9e-25, Sum P(4) = 5.9e-25
Identities = 62/181 (34%), Positives = 84/181 (46%)
Query: 150 ECLKKERDRVSRYLQSNGE-EKLVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLS 208
E L + + VSR GE +KL+E H +Y L E+ G AL +D
Sbjct: 318 EDLGRMYNLVSRITDGLGELKKLLET--H----IYNQGLAAIEKCGESAL------ND-P 364
Query: 209 RMYRFYRTIRAGPHDNYMEYVTNCFMDHSLFQRALKEAFKIFCN-----KTVGGFSSS-E 262
+MY +TI H Y V + F + + F AL +A F N K V S S E
Sbjct: 365 KMY--VQTI-LDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTKMVQSSSKSPE 421
Query: 263 QLATFCDNILKKSGNEKLSDEA-IXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDR 321
LA +CD++LKKS K +EA + YI DKD+F +FY K LA+RL+
Sbjct: 422 LLARYCDSLLKKSS--KNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQN 479
Query: 322 S 322
S
Sbjct: 480 S 480
Score = 111 (44.1 bits), Expect = 5.9e-25, Sum P(4) = 5.9e-25
Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RKVL HQQL++E + L FKP V KK I+ LI ++YLER +T+
Sbjct: 723 RKVLKHQQLLAEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTY 773
Score = 80 (33.2 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 31/129 (24%), Positives = 60/129 (46%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFW---PSYKSS 365
Y KK RLL ++ R +++ ++ R K I+ + + T F + K+
Sbjct: 261 YMKKAEARLLEEQRRVQVYLHESTQDELAR--KCEQVLIEKHLEIFHTEFQNLLDADKNE 318
Query: 366 DLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHIN-AKFELKNIELIISTY 424
DL ++NL S++ + K+ ET ++ L+ I G+ +N K ++ I + Y
Sbjct: 319 DLGRMYNLVSRITDGLGELKKLLETHIYNQGLAAIEKCGESALNDPKMYVQTILDVHKKY 378
Query: 425 HAAILDLFN 433
+A ++ FN
Sbjct: 379 NALVMSAFN 387
Score = 63 (27.2 bits), Expect = 5.9e-25, Sum P(4) = 5.9e-25
Identities = 28/111 (25%), Positives = 54/111 (48%)
Query: 76 LACFRDLVYDALKHKAKDAVID--ERER--EQVDRALLANVLDIFVEHMLQD-------- 123
L +R+ ++ L + +AV+ E+ER E ++ L++ V+ +VE L +
Sbjct: 165 LVTWRECLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFAKGP 224
Query: 124 TSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEK 174
T S Y L D Y R++ E L +++ V+ Y++ E +L+E+
Sbjct: 225 TLSVYKEYFETQFLADTERFYTRESTEFL--QQNPVTEYMKK-AEARLLEE 272
Score = 52 (23.4 bits), Expect = 7.7e-24, Sum P(4) = 7.7e-24
Identities = 43/187 (22%), Positives = 78/187 (41%)
Query: 7 IEFDEGWEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMCSQNTPNNN------- 59
I D+ W+ ++ GI ++ R+ + YM L+ +YN C+ +N
Sbjct: 15 IGLDQIWDDLRAGIQQVYT-----RQS-MAKSRYMELYTHVYNYCTSVHQSNQVRGGGPA 68
Query: 60 -SASCKRRNIPGFDEF-GLACFRDLVYDALKHKAKDAVIDERER--EQVDRALLANVLDI 115
S K+ PG +F GL ++ L + LK+ + + D + E V + D
Sbjct: 69 PSKPSKKTPTPGGAQFVGLELYKRLK-EFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDY 127
Query: 116 -FVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEE----CLKKERDRVSRYLQ---SNG 167
F +L +Y +R +W+ ++ C + + E L R+ + R L +N
Sbjct: 128 RFSSKVLNGICAYLNR---HWVRRE-CDEGRKGTYEIYSLALVTWRECLFRPLNKQVTNA 183
Query: 168 EEKLVEK 174
KL+EK
Sbjct: 184 VLKLIEK 190
Score = 41 (19.5 bits), Expect = 1.5e-13, Sum P(4) = 1.5e-13
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 147 KAEECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVY 183
K+ E L + D + + N EE +E ++++VV+
Sbjct: 418 KSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVF 454
Score = 39 (18.8 bits), Expect = 1.5e-13, Sum P(4) = 1.5e-13
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 16 IQKGIGKLKRILE 28
I G+G+LK++LE
Sbjct: 330 ITDGLGELKKLLE 342
Score = 37 (18.1 bits), Expect = 2.2e-11, Sum P(3) = 2.2e-11
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 227 EYVTNCFMDH-----SLFQRALKEAFKIFCNKTVGGFSSSEQL 264
E VTNCF + S FQ A+ + TV + S Q+
Sbjct: 590 ELVTNCFKNRYTLQASTFQMAILLQYNTEDVYTVQQLTDSTQI 632
>ASPGD|ASPL0000052453 [details] [associations]
symbol:culD species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0043494 "CLRC ubiquitin ligase complex"
evidence=IEA] [GO:0008180 "signalosome" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0031048
"chromatin silencing by small RNA" evidence=IEA] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=IEA]
[GO:0045836 "positive regulation of meiosis" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] [GO:0051570 "regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0031507 "heterochromatin assembly" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 EMBL:BN001308 GO:GO:0016874
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
HOGENOM:HOG000176712 OMA:FEDSLDF EnsemblFungi:CADANIAT00002720
Uniprot:C8VRE7
Length = 880
Score = 255 (94.8 bits), Expect = 2.3e-24, Sum P(3) = 2.3e-24
Identities = 54/171 (31%), Positives = 91/171 (53%)
Query: 325 LARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVF 384
+AR + + R + +DL V+VL+ WP+Y + +P ++ + F
Sbjct: 618 VARDEMSAYNSIKR-ERQTPLPVDLHVSVLSASAWPTYPDVQVR----IPPEIATAISDF 672
Query: 385 KRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNA---SNRLSYS 441
++FY+TK RKL+W + L C + A+F N EL++S++ A +L LFN L+Y
Sbjct: 673 EKFYDTKYNGRKLAWKHQLAHCQLRARFPNGNKELVVSSFQAIVLLLFNELPEGGTLNYR 732
Query: 442 QVITQLNLTHDDLVRLLHSLSILYYKILIKEPDTKSISRSDYFELNSKFTD 492
Q+ L+ +L R L SL+ Y++L K+P + +S +D F N+ FTD
Sbjct: 733 QIQEATTLSDQELTRTLQSLACAKYRVLSKKPKGRDVSPTDEFSYNASFTD 783
Score = 74 (31.1 bits), Expect = 2.3e-24, Sum P(3) = 2.3e-24
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 504 RKVLGHQQLVSECIELL-GR-MFKPAVKAFKKRIEGLISQDYLERYPEN 550
RK + H +LV+E I+ R + +PA KK IE LI +DY+ER N
Sbjct: 828 RKTITHAELVAEVIKATRSRGVLEPA--DIKKNIEKLIEKDYMEREDGN 874
Score = 72 (30.4 bits), Expect = 2.3e-24, Sum P(3) = 2.3e-24
Identities = 36/155 (23%), Positives = 67/155 (43%)
Query: 183 YATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAGPHDNYME-YVTNCFMDHSL--- 238
++T ++E+ G G +F ++ D + R+ F + + D + E + N + H+L
Sbjct: 437 FSTYIVEE---GTGIVFDESEADMVVRLLSFKKQL----DDIWNESFRRNEGLGHALRES 489
Query: 239 FQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILK---------KSGNEKLSDE--AIXX 287
F+ + + K + E +A + D +L+ ++ N L+DE I
Sbjct: 490 FESFMNKGRKSDATGGTDNPKTGEMIAKYVDRLLRGGWRLAPTREAENMPLADEDAEINR 549
Query: 288 XXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRS 322
++ K +F FY+ LARRLL RS
Sbjct: 550 QLDQVLDLFRFVHGKAVFEAFYKNDLARRLLMGRS 584
Score = 59 (25.8 bits), Expect = 5.1e-23, Sum P(3) = 5.1e-23
Identities = 33/158 (20%), Positives = 66/158 (41%)
Query: 70 GFDEFGLACFRD-LVYDALKHKAKDAVIDEREREQ---VDRALLANVLDIFVEHMLQDTS 125
G +F + D + + + A D V +R E D +LL N +++F H L
Sbjct: 268 GLQQFRQHIYSDPTLQEKILQGACDLVSADRSDENGIVADSSLLRNAIELF--HSLDVYV 325
Query: 126 SYYSRISTN--------WILKDPC---PDYMRKAEECLKKERDRVSRY-LQSNGEEKLVE 173
S + + + W ++ Y+ + +++E +R ++ ++KL E
Sbjct: 326 SGFEPVLVSGSKDFFSLWAQQEATGYLASYVENSHRLIEREMNRCEQFSFNRTTKQKLSE 385
Query: 174 KVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMY 211
+ L+ + LL ++ G L GNK+ L ++Y
Sbjct: 386 SLDQTLVTDQESVLLSQKDV-LGLLRIGNKIA-LGQLY 421
Score = 37 (18.1 bits), Expect = 9.3e-21, Sum P(3) = 9.3e-21
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 314 ARRLLFDRSRTLARKNQTG-FEK 335
ARRL+ RT R NQ F+K
Sbjct: 130 ARRLVVKNLRTGPRLNQDSYFDK 152
>DICTYBASE|DDB_G0278991 [details] [associations]
symbol:culE "cullin E" species:44689 "Dictyostelium
discoideum" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001373 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
dictyBase:DDB_G0278991 GenomeReviews:CM000152_GR EMBL:AAFI02000026
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 HSSP:Q9JLV5 RefSeq:XP_641893.1
ProteinModelPortal:Q54XF7 PRIDE:Q54XF7 EnsemblProtists:DDB0266744
GeneID:8621819 KEGG:ddi:DDB_G0278991 OMA:AETLMIN Uniprot:Q54XF7
Length = 750
Score = 140 (54.3 bits), Expect = 2.4e-24, Sum P(5) = 2.4e-24
Identities = 53/213 (24%), Positives = 97/213 (45%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLN 368
Y KL R + R L + F+ +L K+ + VL G W
Sbjct: 466 YCTKLTRMITDMR---LCKDININFQNHLN-EKSLTLPYQFNFYVLTNGSWTLTNKQTAT 521
Query: 369 PIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNI-ELIISTYHAA 427
P F PS+M+ + F+ FY+ + R L+++Y + ++++ I +L + Y A
Sbjct: 522 P-FKPPSEMLSSITYFESFYKKSYQGRVLTFLYDFSRADVDSRQAKGKIYKLTTTAYQMA 580
Query: 428 ILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSILYYKIL-IKEPDTKSISRSDYFEL 486
IL +FN +++++ + + L D+ L L+++ I+ EP K+ + F +
Sbjct: 581 ILLMFNGADKITRFLINDTIGL--DETSIRLPLLALIKTGIIECSEPSFKNWNNDTEFTV 638
Query: 487 NSKFTDR-MRGSRSLS---HHRKVLGHQQLVSE 515
NSKF+ + M+ S +++ K QQ VSE
Sbjct: 639 NSKFSSKKMKVSCNIAVQIGETKQSEGQQTVSE 671
Score = 113 (44.8 bits), Expect = 2.4e-24, Sum P(5) = 2.4e-24
Identities = 30/102 (29%), Positives = 51/102 (50%)
Query: 229 VTNCFMDHSLFQRALKEAFKIFCNKTVGGFSSSEQ-------LATFCDNILKKSGNEKLS 281
+ C+ + + F A+ ++F I N+ + ++ L+ FCD IL+K G +S
Sbjct: 345 IKECYGNDTDFTTAMDKSFSILVNENPASYDPKKKESNIPVVLSKFCDQILRK-GPHHIS 403
Query: 282 DEA-IXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRS 322
DEA + Y+ DKD+F Y+K L++RL+ D S
Sbjct: 404 DEAELEKKLTEAVCLFKYLPDKDIFMLNYQKMLSKRLVEDLS 445
Score = 103 (41.3 bits), Expect = 2.4e-24, Sum P(5) = 2.4e-24
Identities = 34/130 (26%), Positives = 61/130 (46%)
Query: 116 FVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKV 175
F + LQ+T ++Y S ++I K+ +YMR +++E +RV++Y+ + EKL + +
Sbjct: 197 FEQQFLQETETFYKAESADFIEKNGVCEYMRHVYNRIEQETNRVNQYMPISTLEKLTKIL 256
Query: 176 QHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAGPHDNYMEYVTNCFMD 235
+ L+ Y Q K + +K DL MY + N++ + N F D
Sbjct: 257 NNVLISNYKEQFASKFLD----ILIEDKSSDLVMMYSLLSRV------NHLTPLKNIFSD 306
Query: 236 HSLFQRALKE 245
+ LKE
Sbjct: 307 F-IKSEGLKE 315
Score = 84 (34.6 bits), Expect = 2.4e-24, Sum P(5) = 2.4e-24
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPE-NPN 552
+K + H L E + + F P + A KK IE LI Q+Y+ R + NP+
Sbjct: 693 KKTMTHNDLTVETTTQVSKWFTPKITAIKKAIEYLIDQEYIRRTTDDNPS 742
Score = 47 (21.6 bits), Expect = 2.4e-24, Sum P(5) = 2.4e-24
Identities = 15/47 (31%), Positives = 22/47 (46%)
Query: 7 IEFDEGWEYIQKGIGKL-KRILEGLREPPFSSEEYMALHITIYNMCS 52
I DE W ++ L + +GL S + YM ++ IYN CS
Sbjct: 5 ITVDELWAECEQTFEDLFLNLKKGL-----SRKRYMEIYTKIYNYCS 46
Score = 42 (19.8 bits), Expect = 3.1e-18, Sum P(5) = 3.1e-18
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 180 LVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAGPHDNYMEYVTNCF 233
L V Q+++ +++G F N + LS Y ++ GP N +E +CF
Sbjct: 151 LSVSLLQIIKNDRTG----FSTN-LQVLSDSLECY--VQLGPEKNKLEIYQSCF 197
Score = 37 (18.1 bits), Expect = 9.7e-18, Sum P(5) = 9.7e-18
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 113 LDIFVEHMLQDTSSYYSRIS-TNWI--LKDPCPDYMRKAEECLKK 154
LDI +E D YS +S N + LK+ D+++ E LK+
Sbjct: 273 LDILIEDKSSDLVMMYSLLSRVNHLTPLKNIFSDFIKS--EGLKE 315
>UNIPROTKB|F1P2W9 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS50069 SMART:SM00182 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:AADN02000467
EMBL:AADN02000468 EMBL:AADN02000469 IPI:IPI00595196
Ensembl:ENSGALT00000038545 ArrayExpress:F1P2W9 Uniprot:F1P2W9
Length = 687
Score = 152 (58.6 bits), Expect = 7.8e-24, Sum P(4) = 7.8e-24
Identities = 40/155 (25%), Positives = 75/155 (48%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNA--HAGIDLSVTVLATGFWPSYKSSD 366
+ KL R+ D S + N+ F +++ N++ GI + VL G WP ++
Sbjct: 497 FTSKL-HRMYTDMSVSADLNNK--FNNFIK-NQDTIIDLGISFQIYVLQAGAWPLTQAP- 551
Query: 367 LNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHA 426
+ F +P ++ K V++F+ FY RKL+W++ L + + K +++TY
Sbjct: 552 -SSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNYLCKPYVAMVTTYQM 610
Query: 427 AILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSL 461
A+L FN S +SY ++ + +L + + SL
Sbjct: 611 AVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSL 645
Score = 132 (51.5 bits), Expect = 7.8e-24, Sum P(4) = 7.8e-24
Identities = 52/210 (24%), Positives = 95/210 (45%)
Query: 20 IGKLKRILEGLREPPFSSEEYMALHITIYNMCSQNTPNNNSASCKRRNIPGFDEFGLACF 79
IG+L L+ R+ + + + + + + + +TP+++ A + ++ F+ G
Sbjct: 138 IGELA--LDMWRKLMIEPLQAILIRMLLREIKNPSTPSSSQAEYQLKHFC-FNTTGSR-- 192
Query: 80 RDLVYDAL----KHKAKDAVIDERER-EQVDRAL-LANVLDIFVEHMLQDTSSYYSRIST 133
+DL +D K VI+ EQ + L L +IF L +T YY + ++
Sbjct: 193 QDLEFDRCGEDPNQKVIHGVINSFVHVEQYKKKLPLKFYQEIFECPFLNETGEYYKQEAS 252
Query: 134 NWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVYATQLLEKEQS 193
N + + C YM K LK E R +YL + K++ + Q ++ + Q L E
Sbjct: 253 NLLQESNCSQYMEKVLGRLKDEEMRCRKYLHPSSYGKVIHECQQRMVADHL-QFLHAE-- 309
Query: 194 GCGALFRGNKVDDLSRMYRFYRTIRAG-PH 222
C + R K +D++ MY R + +G PH
Sbjct: 310 -CHNIIRQEKRNDMANMYTLLRAVSSGLPH 338
Score = 120 (47.3 bits), Expect = 7.8e-24, Sum P(4) = 7.8e-24
Identities = 29/106 (27%), Positives = 50/106 (47%)
Query: 222 HDNYMEYVTNCFMDHSLFQRALKEAFKIFCN--KTVGGFSSSEQLATFCDNILKKSGNEK 279
H +++ + F AL +A N + + E LA +CDN+LKKS +
Sbjct: 375 HSKFVQLINTVLNGDQHFMSALDKALTSVVNYREPKSICKAPELLAKYCDNLLKKSA-KG 433
Query: 280 LSDEAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRSRTL 325
+++ + YI DKD+F +FY + LA+RL+ S ++
Sbjct: 434 MTENEVEDKLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMSM 479
Score = 39 (18.8 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 26/91 (28%), Positives = 38/91 (41%)
Query: 116 FVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKV 175
FVE +L+ S + I+T +L +M ++ L V Y E K + K
Sbjct: 367 FVESVLEVHSKFVQLINT--VLNGD-QHFMSALDKALTS----VVNYR----EPKSICKA 415
Query: 176 QHELLVVYATQLLEKEQSGCGALFRGNKVDD 206
ELL Y LL+K G N+V+D
Sbjct: 416 P-ELLAKYCDNLLKKSAKG----MTENEVED 441
Score = 37 (18.1 bits), Expect = 7.8e-24, Sum P(4) = 7.8e-24
Identities = 5/9 (55%), Positives = 8/9 (88%)
Query: 5 RLIEFDEGW 13
R+++FDE W
Sbjct: 6 RVVDFDETW 14
>TAIR|locus:2025941 [details] [associations]
symbol:AT1G59800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC007258 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03347
HOGENOM:HOG000176712 IPI:IPI00546899 PIR:A96622 RefSeq:NP_176189.1
UniGene:At.52274 ProteinModelPortal:Q9XIE8 SMR:Q9XIE8
EnsemblPlants:AT1G59800.1 GeneID:842273 KEGG:ath:AT1G59800
TAIR:At1g59800 eggNOG:NOG310081 InParanoid:Q9XIE8 OMA:DECMLRE
PhylomeDB:Q9XIE8 ProtClustDB:CLSN2913533 Genevestigator:Q9XIE8
Uniprot:Q9XIE8
Length = 255
Score = 191 (72.3 bits), Expect = 2.4e-23, Sum P(2) = 2.4e-23
Identities = 42/99 (42%), Positives = 63/99 (63%)
Query: 98 EREREQVDRALLANVLDIFVEH---------------MLQDTSSYYSRISTNWILKDPCP 142
ERE EQ+DR L+ NV+D+FVE+ MLQDT+SYYS ++ WI ++ C
Sbjct: 156 EREGEQIDRELVRNVIDVFVENGMGTLKKYEEDFERLMLQDTASYYSSKASRWIQEESCL 215
Query: 143 DYMRKAEECLKKERDRVSRYLQSNGEEKLVEKVQHELLV 181
DY K ++CL++ER+RV+ YL E KL E V++ +++
Sbjct: 216 DYTLKPQQCLQRERERVTHYLHPTTEPKLFE-VRYGIII 253
Score = 152 (58.6 bits), Expect = 7.7e-16, Sum P(2) = 7.7e-16
Identities = 45/152 (29%), Positives = 73/152 (48%)
Query: 44 HITIYNMCSQNTPNNNSASCKRRNIPGFDEFGLACFRDLVYDALKHKAKDAVI----DER 99
H + + S+ + + ++ +P E GL CFRD VY ++ A +A++ ER
Sbjct: 98 HKLLVRLFSRRLVYLDDSFLSKKGLPSLREVGLNCFRDQVYREMQSMAAEAILALIHKER 157
Query: 100 EREQVDRALLANVLDIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKER--D 157
E EQ+DR L+ NV+D+FVE+ + T Y +L+D Y KA +++E D
Sbjct: 158 EGEQIDRELVRNVIDVFVENGM-GTLKKYEEDFERLMLQDTASYYSSKASRWIQEESCLD 216
Query: 158 RVSRYLQSNGEEKLVEKVQHELLVVYATQLLE 189
+ Q E+ E+V H L +L E
Sbjct: 217 YTLKPQQCLQRER--ERVTHYLHPTTEPKLFE 246
Score = 110 (43.8 bits), Expect = 2.4e-23, Sum P(2) = 2.4e-23
Identities = 22/56 (39%), Positives = 31/56 (55%)
Query: 1 MVQRRLIEFDEGWEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMCSQNTP 56
MV I+F+ W IQ+G KL R++EG EP F+ E M +H Y +C+ P
Sbjct: 1 MVAPTEIKFEVEWSNIQQGFTKLIRMIEGESEPAFNQEIMMMMHTATYRICAYKNP 56
>FB|FBgn0015509 [details] [associations]
symbol:lin19 "lin-19-like" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IGI] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 EMBL:AE013599 GO:GO:0007095 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 HOGENOM:HOG000021491 GO:GO:0006511
GO:GO:0019005 eggNOG:COG5647 SUPFAM:SSF75632 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 KO:K03347 EMBL:L41642
EMBL:AF136343 EMBL:BT010290 RefSeq:NP_523655.1 RefSeq:NP_724621.1
RefSeq:NP_724622.1 RefSeq:NP_724623.1 UniGene:Dm.7926
ProteinModelPortal:Q24311 SMR:Q24311 DIP:DIP-19461N IntAct:Q24311
MINT:MINT-989395 STRING:Q24311 PaxDb:Q24311
EnsemblMetazoa:FBtr0088845 EnsemblMetazoa:FBtr0088846
EnsemblMetazoa:FBtr0088847 EnsemblMetazoa:FBtr0088848 GeneID:35742
KEGG:dme:Dmel_CG1877 UCSC:CG1877-RA CTD:35742 FlyBase:FBgn0015509
InParanoid:Q24311 OMA:NECIAES OrthoDB:EOG42280P PhylomeDB:Q24311
GenomeRNAi:35742 NextBio:794991 Bgee:Q24311 GermOnline:CG1877
Uniprot:Q24311
Length = 774
Score = 154 (59.3 bits), Expect = 1.9e-22, Sum P(4) = 1.9e-22
Identities = 45/166 (27%), Positives = 79/166 (47%)
Query: 333 FEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKT 392
F++YL KN ID + VL++G WP S++ F LPS++ + V F FY +
Sbjct: 520 FKQYLA-EKNLTMEIDFGIEVLSSGSWPFQLSNN----FLLPSELERSVRQFNEFYAARH 574
Query: 393 KHRKLSWIYSL--GQCHINA-KFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNL 449
RKL+W+Y + G+ +N + L ST+ ++L FN + Q+
Sbjct: 575 SGRKLNWLYQMCKGELIMNVNRNNSSTYTLQASTFQMSVLLQFNDQLSFTVQQLQDNTQT 634
Query: 450 THDDLVRLLHSLSILYYKILIKEPDTKSISRSDYFELNSKFTDRMR 495
++L+++L L L K+L + S++ EL + ++ R
Sbjct: 635 QQENLIQVLQIL--LKAKVLTSSDNENSLTPESTVELFLDYKNKKR 678
Score = 122 (48.0 bits), Expect = 1.9e-22, Sum P(4) = 1.9e-22
Identities = 54/204 (26%), Positives = 85/204 (41%)
Query: 128 YSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVYATQL 187
Y +T +LK C + + E+ LK L ++ + L K + L+ + + L
Sbjct: 277 YLHETTADVLKSTCEEVL--IEKHLKIFHTEFQNLLNADRNDDL--KRMYSLVALSSKNL 332
Query: 188 ------LEKE--QSGCGALFRGNKVDDLSRMYRFYRTIRAGPHDNYMEYVTNCFMDHSLF 239
LE G A+ + D + + +TI H Y V F + + F
Sbjct: 333 TDLKSILENHILHQGTEAIAKCCTTDAANDPKTYVQTI-LDVHKKYNALVLTAFNNDNGF 391
Query: 240 QRALKEAFKIFCNKTVGGFSSS-----EQLATFCDNILKKSGNEKLSDEAIXXXXXXXXX 294
AL +A F N V ++S E LA +CD +LKKS D+ +
Sbjct: 392 VAALDKACGKFINSNVVTIANSASKSPELLAKYCDLLLKKSSKNP-EDKELEDNLNQVMV 450
Query: 295 XXXYISDKDLFAEFYRKKLARRLL 318
YI DKD+F ++Y K LA+RL+
Sbjct: 451 VFKYIEDKDVFQKYYSKMLAKRLV 474
Score = 101 (40.6 bits), Expect = 1.9e-22, Sum P(4) = 1.9e-22
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK L H L+SE + L FKP V KK I+ LI ++YLER + +T+
Sbjct: 720 RKRLNHTNLISEVLNQLSTRFKPKVPVIKKCIDILIEKEYLERMEGHKDTY 770
Score = 92 (37.4 bits), Expect = 2.1e-19, Sum P(4) = 2.1e-19
Identities = 33/136 (24%), Positives = 59/136 (43%)
Query: 80 RDLVYDALKHKAKDAVIDEREREQVDRALLANVLDIFVEHMLQDTSSYYSRISTNWILKD 139
R LV D ++ + +E + + ++ L+ F + DTS++Y + S ++ +
Sbjct: 189 RSLVRDVIECYV-ELSFNEEDTD-AEQQKLSVYKQNFENKFIADTSAFYEKESDAFLSTN 246
Query: 140 PCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVYATQLLEKE----QSGC 195
+Y++ E L++E RV + NG L E L L+EK +
Sbjct: 247 TVTEYLKHVENRLEEETQRVRGFNSKNGLSYLHETTADVLKSTCEEVLIEKHLKIFHTEF 306
Query: 196 GALFRGNKVDDLSRMY 211
L ++ DDL RMY
Sbjct: 307 QNLLNADRNDDLKRMY 322
Score = 65 (27.9 bits), Expect = 1.1e-16, Sum P(4) = 1.1e-16
Identities = 30/153 (19%), Positives = 68/153 (44%)
Query: 38 EEYMALHITIYNMCSQNTPNNNSASCK--RRNIPGFDEFGLACFRDLVYDALKHKAKDAV 95
+ Y + +C+ N C+ ++ I L ++ ++ L AV
Sbjct: 115 KSYQFSSTVLDGICNYLNRNWVKRECEEGQKGIYKIYRLALVAWKGHLFQVLNEPVTKAV 174
Query: 96 I----DEREREQVDRALLANVLDIFVEHML--QDTSSYYSRIST------NWILKDPCPD 143
+ +ER+ + ++R+L+ +V++ +VE +DT + ++S N + D
Sbjct: 175 LKSIEEERQGKLINRSLVRDVIECYVELSFNEEDTDAEQQKLSVYKQNFENKFIADTSAF 234
Query: 144 YMRKAEECLKKERDRVSRYLQSNGEEKLVEKVQ 176
Y ++++ L + V+ YL+ + E +L E+ Q
Sbjct: 235 YEKESDAFLST--NTVTEYLK-HVENRLEEETQ 264
Score = 53 (23.7 bits), Expect = 1.9e-22, Sum P(4) = 1.9e-22
Identities = 11/49 (22%), Positives = 25/49 (51%)
Query: 4 RRLIEFDEGWEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMCS 52
++L+ D+ W + +GI ++ E E + +YM + +Y+ C+
Sbjct: 11 QKLVNLDDIWSELVEGI---MQVFE--HEKSLTRSQYMRFYTHVYDYCT 54
>UNIPROTKB|G4N0J9 [details] [associations]
symbol:MGG_07731 "Cullin-3" species:242507 "Magnaporthe
oryzae 70-15" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001373
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 EMBL:CM001233
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03869
RefSeq:XP_003712937.1 ProteinModelPortal:G4N0J9
EnsemblFungi:MGG_07731T0 GeneID:2683658 KEGG:mgr:MGG_07731
Uniprot:G4N0J9
Length = 830
Score = 138 (53.6 bits), Expect = 6.2e-22, Sum P(4) = 6.2e-22
Identities = 43/137 (31%), Positives = 66/137 (48%)
Query: 372 NLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKFE-LKNI----------ELI 420
N P ++ + + F +FY R L+WI S G I F +K + EL
Sbjct: 595 NYPPEIKRLQDSFFKFYLKDRSGRVLTWIGSAGSADIKCVFPPVKGMSGPLSRERRYELN 654
Query: 421 ISTYHAAILDLFNA---SNRLSYSQVITQLNLTHDDLVRLLHSLSIL-YYKILIKEPDTK 476
+STY +L LFN+ LS+ + + ++ DL R L SLSI ++L+K+P TK
Sbjct: 655 VSTYGMVVLMLFNSLEDGETLSFEDIQAETSIPPKDLSRALASLSINPKARVLLKDPATK 714
Query: 477 SISRSDYFELNSKFTDR 493
+I D F N+ F +
Sbjct: 715 TIRPGDKFSFNAGFVSK 731
Score = 102 (41.0 bits), Expect = 6.2e-22, Sum P(4) = 6.2e-22
Identities = 30/133 (22%), Positives = 60/133 (45%)
Query: 80 RDLVYDALKHKAKDAVIDEREREQVDRALLANVLDIFVEHMLQDTSSYYSRISTNWILKD 139
R L++ +K +D + E + DR L F H+L+ + ++Y + +
Sbjct: 201 RSLIHSCVK-MLEDLYETDEEMD-ADRLYLVR----FEPHLLEASRTFYRSEALKLLRNG 254
Query: 140 PCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVYATQLLEKEQSGCGALF 199
++R+ L +E DR L + EK+ V+ EL+ + L E +G +
Sbjct: 255 DASIWIRQTHRRLLEEEDRCKTTLSTLSIEKMTRAVEAELISAHLNDFLALENNGLRQML 314
Query: 200 RGNKVDDLSRMYR 212
++V+DL+ +Y+
Sbjct: 315 DDDRVEDLAILYQ 327
Score = 95 (38.5 bits), Expect = 6.2e-22, Sum P(4) = 6.2e-22
Identities = 24/71 (33%), Positives = 35/71 (49%)
Query: 260 SSEQLATFCDNILKKSGNEKLSDEAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLF 319
SSE ++ + D LK+ K SD + Y+ DKDLF +Y+K L RRLL
Sbjct: 440 SSEFVSLYIDENLKRGIRGK-SDLEVTAILDRSIVMIRYLKDKDLFERYYQKHLGRRLLH 498
Query: 320 DRSRTLARKNQ 330
R+ + + Q
Sbjct: 499 SRASSEEAEKQ 509
Score = 93 (37.8 bits), Expect = 6.2e-22, Sum P(4) = 6.2e-22
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPEN 550
RK L H L++E I L F+P V K RIE LI+++YLER ++
Sbjct: 778 RKELAHNALLAEVIGQLVSRFQPDVAMIKTRIEDLIAREYLERLDDS 824
Score = 73 (30.8 bits), Expect = 4.9e-15, Sum P(4) = 4.9e-15
Identities = 26/102 (25%), Positives = 44/102 (43%)
Query: 324 TLARKNQTGFEKYLRYNKNA---HAGIDLSVTVLATGFWP--------SYKSSDLNPIF- 371
T++ + T + +++R + H IDL+++VL + WP D P
Sbjct: 534 TISEELSTKYGEHIRSLGDVDVHHKPIDLAISVLTSNSWPPDVMGRPAQVGRGDGPPAVD 593
Query: 372 -NLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKF 412
N P ++ + + F +FY R L+WI S G I F
Sbjct: 594 CNYPPEIKRLQDSFFKFYLKDRSGRVLTWIGSAGSADIKCVF 635
>ASPGD|ASPL0000060435 [details] [associations]
symbol:culA species:162425 "Emericella nidulans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069 SMART:SM00182
SMART:SM00884 EMBL:BN001308 GO:GO:0016874 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176713 OMA:SGVINCY
EnsemblFungi:CADANIAT00001628 Uniprot:C8VU45
Length = 764
Score = 176 (67.0 bits), Expect = 7.1e-22, Sum P(3) = 7.1e-22
Identities = 63/231 (27%), Positives = 102/231 (44%)
Query: 270 NILKKSGNEKLSDEAIXXXXXXXXXXXXYISD-KDLFAEFYRKKLARRLL-FDRSRTLAR 327
++ +K ++ L+ + IS K+ Y KL R S+ L
Sbjct: 445 DVFQKFYSKMLAKRLVHVSSVSDDAETSMISKLKEACGFEYTNKLQRMFQDIQISKDLNS 504
Query: 328 KNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRF 387
+ EK + + +D +L TGFWP S F P +++K E F++F
Sbjct: 505 SYKDWLEKSFLDDDDRKKLVDSHFQILGTGFWPLTAPSTS---FLAPPEIVKTSERFQKF 561
Query: 388 YETKTKHRKLSWIYSLGQCHINAKFELKNIEL----IISTYHAAILDLFNASNRLSYSQV 443
Y K RKL+W++ L + + A + +KN ++ ++STY IL LFN S+ L+YS +
Sbjct: 562 YCDKHNGRKLTWLWQLCKGELKANY-IKNTKVPYTFLVSTYQMGILLLFNESDTLTYSDI 620
Query: 444 ITQLNLTHDDLVRLLHSLSI-LYYKILIKEPDTKSISRSDYFELNSKFTDR 493
LT + L +LSI L K+L P+ F LN F ++
Sbjct: 621 QKATTLTPEILDP---NLSIFLKAKVLNISPEGSKPGPDSTFSLNYNFKNK 668
Score = 124 (48.7 bits), Expect = 4.1e-16, Sum P(3) = 4.1e-16
Identities = 32/101 (31%), Positives = 48/101 (47%)
Query: 222 HDNYMEYVTNCFMDHSLFQRALKEAFKIFCNKTV----GGFSSSEQLATFCDNILKKSGN 277
H Y V F S F R+L A + F N+ G + E LA + D++LK+ G+
Sbjct: 361 HTRYHSLVKEAFNGESEFVRSLDNACREFVNRNKICKSGSTKTPELLAKYTDSLLKR-GS 419
Query: 278 EKLSDEAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLL 318
+ + + YI DKD+F +FY K LA+RL+
Sbjct: 420 KAAEESELEEMLVQIMTVFKYIEDKDVFQKFYSKMLAKRLV 460
Score = 114 (45.2 bits), Expect = 7.1e-22, Sum P(3) = 7.1e-22
Identities = 33/105 (31%), Positives = 52/105 (49%)
Query: 116 FVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKV 175
F L+ T YY S ++ + +YM+KAE L++E+ RV YL ++ + L
Sbjct: 218 FQRPFLEATRIYYEDESRQFVADNSVVEYMKKAEIRLEEEKARVGLYLNNDISKDLTSTC 277
Query: 176 QHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG 220
++LV ++LL E L + DDL+RMYR I+ G
Sbjct: 278 L-DVLVTAHSELLRDEFQ---PLLDNERQDDLARMYRLLSRIKDG 318
Score = 92 (37.4 bits), Expect = 7.1e-22, Sum P(3) = 7.1e-22
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLER 546
RK + H QLV E I + F P V KK IE L+ +DY+ER
Sbjct: 712 RKKMKHVQLVQEVIHQVKSRFPPQVPDIKKNIEALMEKDYIER 754
Score = 65 (27.9 bits), Expect = 7.6e-17, Sum P(3) = 7.6e-17
Identities = 40/189 (21%), Positives = 82/189 (43%)
Query: 8 EFDEGWEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMCSQNTPNNNSASCKRRN 67
+ +E W +++ GI + LE + YMAL+ ++N C+ + + A +R
Sbjct: 13 DLEETWVFLENGINNVMVKLED----GVDMKNYMALYTAVHNFCTSHKAVSGQAIQAQR- 67
Query: 68 IPGFDEFGLACFRDLVYDALKHKAKDAVIDEREREQVDRALLANVLDIFVEHML--QDTS 125
G G +R L +H + V E D ALL+ + + + + +
Sbjct: 68 --GAHLLGEELYRKLGEYLSRHL--EWVHGE-SMGHTDEALLSFYIREWQRYTTAAKYIN 122
Query: 126 SYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVYAT 185
+ ++ +W+ R+ +E K D +++L E+ + KV HE ++
Sbjct: 123 HLFRYLNRHWV--------KREIDEGKKNVYDVYTQHLVKWKEDFFL-KV-HEKVMGAVL 172
Query: 186 QLLEKEQSG 194
+L+EK+++G
Sbjct: 173 KLVEKQRNG 181
>ZFIN|ZDB-GENE-091113-45 [details] [associations]
symbol:cul5b "cullin 5b" species:7955 "Danio rerio"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-091113-45 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:CT827807
IPI:IPI00897211 Ensembl:ENSDART00000130179 Bgee:F1QFY1
Uniprot:F1QFY1
Length = 795
Score = 141 (54.7 bits), Expect = 4.8e-21, Sum P(4) = 4.8e-21
Identities = 55/217 (25%), Positives = 102/217 (47%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLN 368
Y KLAR +F + NQ+ F++ ++NK A +++ +L G W +SS+
Sbjct: 504 YVNKLAR--MFQDIKVSEDLNQS-FKEMHKHNKLALPADSVNIKILNAGAWS--RSSE-- 556
Query: 369 PIF-NLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAA 427
+F +LP+++ + + FY+ RKL W + + I K E+ +L ++T+ A
Sbjct: 557 KVFVSLPTELEDLIPEVEDFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLA 616
Query: 428 ILDLFNAS--NRLSYSQVITQLNLTHDDLVRLLHSLSI---LYYKILIKEP---DTKSIS 479
+L +N R+S+ + L +L R L SL L ++L EP K +
Sbjct: 617 VLFAWNQRPRERISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLSYEPVVGSPKDFA 676
Query: 480 RSDYFELNSKFTDRMRGSRSLSHHR-KVLGHQQLVSE 515
F +N +F+ ++ S+ + ++G QL +E
Sbjct: 677 EGTVFSINQEFS-LIKNSKVQKRGKINLIGRLQLTTE 712
Score = 102 (41.0 bits), Expect = 4.8e-21, Sum P(4) = 4.8e-21
Identities = 27/89 (30%), Positives = 44/89 (49%)
Query: 235 DHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSG-NEKLSDEAIXXXXXXXX 293
D ++F+ L K KT E LA +CD +L+K+ ++KL+ E I
Sbjct: 394 DATIFKLELPLKQKGVSLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVL 453
Query: 294 XXXXYISDKDLFAEFYRKKLARRLLFDRS 322
Y+ +KD+F +++ L RRL+ D S
Sbjct: 454 LVLKYVQNKDVFMRYHKAHLTRRLILDIS 482
Score = 96 (38.9 bits), Expect = 4.8e-21, Sum P(4) = 4.8e-21
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK + + QL +E +E+L MF P K K++IE LI Y++R + NTF
Sbjct: 741 RKRISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIKRDETDINTF 791
Score = 79 (32.9 bits), Expect = 4.8e-21, Sum P(4) = 4.8e-21
Identities = 19/90 (21%), Positives = 42/90 (46%)
Query: 116 FVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKV 175
F + L T +Y + +++ ++ +YM+ A+ L++E R RYL++ E V+ +
Sbjct: 202 FEKSYLDSTERFYKTQAPSYLQQNGVQNYMKYADGKLREEEKRALRYLETRRECNSVQAL 261
Query: 176 QHELLVVYATQLLEKEQSGCGALFRGNKVD 205
+ T E + C + + N+ +
Sbjct: 262 MECCVNALVTSFKETILTECPGMIKRNETE 291
Score = 38 (18.4 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 417 IELIISTYHAAILDLFNASNRLSYSQVITQL 447
++L I AI+ + R+S +Q+ T+L
Sbjct: 723 VQLRILRTQEAIIQIMKMRKRISNAQLQTEL 753
>WB|WBGene00000837 [details] [associations]
symbol:cul-2 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0051759 "sister chromosome movement
towards spindle pole involved in meiotic sister chromatid
segregation" evidence=IMP] [GO:0007138 "meiotic anaphase II"
evidence=IMP] [GO:0042078 "germ-line stem cell division"
evidence=IMP] [GO:0008054 "cyclin catabolic process" evidence=IMP]
[GO:0051232 "meiotic spindle elongation" evidence=IMP] [GO:0008595
"anterior/posterior axis specification, embryo" evidence=IMP]
[GO:0008105 "asymmetric protein localization" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0005634 GO:GO:0009792 GO:GO:0005737 GO:GO:0007067
GO:GO:0008595 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0008105 GO:GO:0030261 eggNOG:COG5647 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GO:GO:0042078 GO:GO:0007138 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176713 EMBL:U58084 EMBL:Z92822 PIR:C88618 PIR:T27884
RefSeq:NP_001023007.1 RefSeq:NP_001023008.1 RefSeq:NP_001023009.1
RefSeq:NP_499825.3 UniGene:Cel.21341 ProteinModelPortal:Q17390
SMR:Q17390 IntAct:Q17390 MINT:MINT-4507382 STRING:Q17390
PaxDb:Q17390 PRIDE:Q17390 EnsemblMetazoa:ZK520.4a GeneID:176806
KEGG:cel:CELE_ZK520.4 UCSC:ZK520.4a CTD:35420 WormBase:ZK520.4a
WormBase:ZK520.4b WormBase:ZK520.4c WormBase:ZK520.4d
InParanoid:Q9NA22 KO:K03870 OMA:VMLDYVE NextBio:894074
ArrayExpress:Q17390 GO:GO:0051232 GO:GO:0051759 Uniprot:Q17390
Length = 850
Score = 135 (52.6 bits), Expect = 2.5e-20, Sum P(4) = 2.5e-20
Identities = 55/194 (28%), Positives = 87/194 (44%)
Query: 222 HDNYMEYVTNCFMDHSLFQRALKEAFKIFCNKTVGGFS---SSEQLATFCDNILKKSGNE 278
++ + + T FMD F L +A + N G S +SE+LA + D +LKKS +
Sbjct: 439 YNKFNDMKTAVFMDDGEFSSGLDKALQGVVNSKEPGQSVPKASERLARYTDGLLKKS-TK 497
Query: 279 KLSDEAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRSRTLARKNQTGFEKYLR 338
LS+ + YI DKD+F +FY K LA RL+ S ++ + L
Sbjct: 498 GLSETDLEAKLDSAIVIFRYIEDKDIFQKFYSKMLANRLIASTSISMDAEE-------LM 550
Query: 339 YNKNAHA-GIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHRKL 397
NK A G + + + L+ F S +L+ F+ IK V+ +F T+T +
Sbjct: 551 INKLKQACGYEFT-SKLSRMFTDIGLSQELSNNFDKHIADIKTVQPDVKFVPTQTMILQA 609
Query: 398 -SWIYSLGQCHINA 410
SW + Q N+
Sbjct: 610 GSWPLNAPQLSTNS 623
Score = 128 (50.1 bits), Expect = 2.5e-20, Sum P(4) = 2.5e-20
Identities = 34/128 (26%), Positives = 58/128 (45%)
Query: 93 DAVIDEREREQVDRALLANVLDIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECL 152
D V E R + + A + F + +L DT YYS ++ + C +YM + L
Sbjct: 276 DVVPAEGARYKARESTTAFYQESFEKPLLTDTEQYYSALAQKMLTDLSCSEYMEQVIVLL 335
Query: 153 KKERDRVSRYLQSNGEEKLVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYR 212
++E R +YL + EK++ Q ++ + +L + C L + DL MYR
Sbjct: 336 EQEEMRAKKYLHESSVEKVITLCQKVMIKAHKDKL----HAVCHDLITNEENKDLRNMYR 391
Query: 213 FYRTIRAG 220
+ I+AG
Sbjct: 392 LLKPIQAG 399
Score = 113 (44.8 bits), Expect = 2.5e-20, Sum P(4) = 2.5e-20
Identities = 35/108 (32%), Positives = 51/108 (47%)
Query: 448 NLTHDDLVRLLHSLSILYYKILIKEPDT-KSISRSDYFELNSKFTDRMRGSRS----LSH 502
NLT D LVRL S++ K ++ P K++ + N+ DR +
Sbjct: 736 NLTADSLVRLNMSMTSKRMKFRLQAPQVNKAVEKEQEAVANTVSQDRKYYMECAIVRIMK 795
Query: 503 HRKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPEN 550
RKVL H LV+E ++ F P V KK IE LI + Y++R +N
Sbjct: 796 TRKVLKHNALVTEIMDQTKGRFSPDVPFIKKSIEDLIEKMYIQRTDQN 843
Score = 99 (39.9 bits), Expect = 2.8e-09, Sum P(3) = 2.8e-09
Identities = 46/241 (19%), Positives = 99/241 (41%)
Query: 270 NILKKSGNEKLSDEAIXXXXXXXXXXXXYISD-KDLFAEFYRKKLARRLLFDRSRTLARK 328
+I +K ++ L++ I I+ K + KL+R + D L+++
Sbjct: 522 DIFQKFYSKMLANRLIASTSISMDAEELMINKLKQACGYEFTSKLSR-MFTDIG--LSQE 578
Query: 329 NQTGFEKYLRYNKNAHAGIDLSVT---VLATGFWP---SYKSSDLN-------PIFNLPS 375
F+K++ K + T +L G WP S++ N F+LP
Sbjct: 579 LSNNFDKHIADIKTVQPDVKFVPTQTMILQAGSWPLNAPQLSTNSNNQTAQDVANFHLPR 638
Query: 376 QMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNAS 435
+ ++ F++FY K RKL+W++++ Q + + K + Y A L F
Sbjct: 639 ILQPVIQEFEKFYTGKHNGRKLTWLFNMSQGDVRLTYLDKQYVAQMYVYQMAALLCFERR 698
Query: 436 NRLSYSQVITQLNLTHDDLVRLLHSLSILYYKILIKEPDTKSISRSDYFELNSKFTD-RM 494
+ + + ++ ++ D L++ + ++ + + D ++++ LN T RM
Sbjct: 699 DAILVKDIGEEIGVSGDYLLKTIRTI----LDVTLLTCDDQNLTADSLVRLNMSMTSKRM 754
Query: 495 R 495
+
Sbjct: 755 K 755
Score = 39 (18.8 bits), Expect = 2.2e-11, Sum P(4) = 2.2e-11
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 145 MRKAEECLKKER-DRVSRYLQSNGEEKLVEKV 175
+++ EE +KK+ + VSR N ++ VE V
Sbjct: 404 VKEFEEYVKKKGLEAVSRLTGENVPQQFVENV 435
Score = 37 (18.1 bits), Expect = 2.5e-20, Sum P(4) = 2.5e-20
Identities = 14/53 (26%), Positives = 28/53 (52%)
Query: 5 RLIEFDEGWEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMC-SQNTP 56
+++EFD+ W ++ I + I LR P ++ ++ +Y++C S TP
Sbjct: 83 KVVEFDKVWVQLRPSI--IDII--NLR--PITNVQWHHKFSDVYDICVSIPTP 129
>UNIPROTKB|Q17390 [details] [associations]
symbol:cul-2 "Cullin-2" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0005634 GO:GO:0009792 GO:GO:0005737 GO:GO:0007067
GO:GO:0008595 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0008105 GO:GO:0030261 eggNOG:COG5647 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GO:GO:0042078 GO:GO:0007138 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176713 EMBL:U58084 EMBL:Z92822 PIR:C88618 PIR:T27884
RefSeq:NP_001023007.1 RefSeq:NP_001023008.1 RefSeq:NP_001023009.1
RefSeq:NP_499825.3 UniGene:Cel.21341 ProteinModelPortal:Q17390
SMR:Q17390 IntAct:Q17390 MINT:MINT-4507382 STRING:Q17390
PaxDb:Q17390 PRIDE:Q17390 EnsemblMetazoa:ZK520.4a GeneID:176806
KEGG:cel:CELE_ZK520.4 UCSC:ZK520.4a CTD:35420 WormBase:ZK520.4a
WormBase:ZK520.4b WormBase:ZK520.4c WormBase:ZK520.4d
InParanoid:Q9NA22 KO:K03870 OMA:VMLDYVE NextBio:894074
ArrayExpress:Q17390 GO:GO:0051232 GO:GO:0051759 Uniprot:Q17390
Length = 850
Score = 135 (52.6 bits), Expect = 2.5e-20, Sum P(4) = 2.5e-20
Identities = 55/194 (28%), Positives = 87/194 (44%)
Query: 222 HDNYMEYVTNCFMDHSLFQRALKEAFKIFCNKTVGGFS---SSEQLATFCDNILKKSGNE 278
++ + + T FMD F L +A + N G S +SE+LA + D +LKKS +
Sbjct: 439 YNKFNDMKTAVFMDDGEFSSGLDKALQGVVNSKEPGQSVPKASERLARYTDGLLKKS-TK 497
Query: 279 KLSDEAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRSRTLARKNQTGFEKYLR 338
LS+ + YI DKD+F +FY K LA RL+ S ++ + L
Sbjct: 498 GLSETDLEAKLDSAIVIFRYIEDKDIFQKFYSKMLANRLIASTSISMDAEE-------LM 550
Query: 339 YNKNAHA-GIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHRKL 397
NK A G + + + L+ F S +L+ F+ IK V+ +F T+T +
Sbjct: 551 INKLKQACGYEFT-SKLSRMFTDIGLSQELSNNFDKHIADIKTVQPDVKFVPTQTMILQA 609
Query: 398 -SWIYSLGQCHINA 410
SW + Q N+
Sbjct: 610 GSWPLNAPQLSTNS 623
Score = 128 (50.1 bits), Expect = 2.5e-20, Sum P(4) = 2.5e-20
Identities = 34/128 (26%), Positives = 58/128 (45%)
Query: 93 DAVIDEREREQVDRALLANVLDIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECL 152
D V E R + + A + F + +L DT YYS ++ + C +YM + L
Sbjct: 276 DVVPAEGARYKARESTTAFYQESFEKPLLTDTEQYYSALAQKMLTDLSCSEYMEQVIVLL 335
Query: 153 KKERDRVSRYLQSNGEEKLVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYR 212
++E R +YL + EK++ Q ++ + +L + C L + DL MYR
Sbjct: 336 EQEEMRAKKYLHESSVEKVITLCQKVMIKAHKDKL----HAVCHDLITNEENKDLRNMYR 391
Query: 213 FYRTIRAG 220
+ I+AG
Sbjct: 392 LLKPIQAG 399
Score = 113 (44.8 bits), Expect = 2.5e-20, Sum P(4) = 2.5e-20
Identities = 35/108 (32%), Positives = 51/108 (47%)
Query: 448 NLTHDDLVRLLHSLSILYYKILIKEPDT-KSISRSDYFELNSKFTDRMRGSRS----LSH 502
NLT D LVRL S++ K ++ P K++ + N+ DR +
Sbjct: 736 NLTADSLVRLNMSMTSKRMKFRLQAPQVNKAVEKEQEAVANTVSQDRKYYMECAIVRIMK 795
Query: 503 HRKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPEN 550
RKVL H LV+E ++ F P V KK IE LI + Y++R +N
Sbjct: 796 TRKVLKHNALVTEIMDQTKGRFSPDVPFIKKSIEDLIEKMYIQRTDQN 843
Score = 99 (39.9 bits), Expect = 2.8e-09, Sum P(3) = 2.8e-09
Identities = 46/241 (19%), Positives = 99/241 (41%)
Query: 270 NILKKSGNEKLSDEAIXXXXXXXXXXXXYISD-KDLFAEFYRKKLARRLLFDRSRTLARK 328
+I +K ++ L++ I I+ K + KL+R + D L+++
Sbjct: 522 DIFQKFYSKMLANRLIASTSISMDAEELMINKLKQACGYEFTSKLSR-MFTDIG--LSQE 578
Query: 329 NQTGFEKYLRYNKNAHAGIDLSVT---VLATGFWP---SYKSSDLN-------PIFNLPS 375
F+K++ K + T +L G WP S++ N F+LP
Sbjct: 579 LSNNFDKHIADIKTVQPDVKFVPTQTMILQAGSWPLNAPQLSTNSNNQTAQDVANFHLPR 638
Query: 376 QMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNAS 435
+ ++ F++FY K RKL+W++++ Q + + K + Y A L F
Sbjct: 639 ILQPVIQEFEKFYTGKHNGRKLTWLFNMSQGDVRLTYLDKQYVAQMYVYQMAALLCFERR 698
Query: 436 NRLSYSQVITQLNLTHDDLVRLLHSLSILYYKILIKEPDTKSISRSDYFELNSKFTD-RM 494
+ + + ++ ++ D L++ + ++ + + D ++++ LN T RM
Sbjct: 699 DAILVKDIGEEIGVSGDYLLKTIRTI----LDVTLLTCDDQNLTADSLVRLNMSMTSKRM 754
Query: 495 R 495
+
Sbjct: 755 K 755
Score = 39 (18.8 bits), Expect = 2.2e-11, Sum P(4) = 2.2e-11
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 145 MRKAEECLKKER-DRVSRYLQSNGEEKLVEKV 175
+++ EE +KK+ + VSR N ++ VE V
Sbjct: 404 VKEFEEYVKKKGLEAVSRLTGENVPQQFVENV 435
Score = 37 (18.1 bits), Expect = 2.5e-20, Sum P(4) = 2.5e-20
Identities = 14/53 (26%), Positives = 28/53 (52%)
Query: 5 RLIEFDEGWEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMC-SQNTP 56
+++EFD+ W ++ I + I LR P ++ ++ +Y++C S TP
Sbjct: 83 KVVEFDKVWVQLRPSI--IDII--NLR--PITNVQWHHKFSDVYDICVSIPTP 129
>WB|WBGene00000840 [details] [associations]
symbol:cul-5 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0051729
"germline cell cycle switching, mitotic to meiotic cell cycle"
evidence=IMP] [GO:0006468 "protein phosphorylation" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0008340 GO:GO:0006468 GO:GO:0000003 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0051729 GO:GO:0006974 GO:GO:0016567
GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
EMBL:Z70783 PIR:T28043 RefSeq:NP_505616.2 ProteinModelPortal:Q23639
SMR:Q23639 DIP:DIP-25847N IntAct:Q23639 MINT:MINT-1126406
STRING:Q23639 PaxDb:Q23639 EnsemblMetazoa:ZK856.1 GeneID:179413
KEGG:cel:CELE_ZK856.1 UCSC:ZK856.1 CTD:43434 WormBase:ZK856.1
HOGENOM:HOG000007610 InParanoid:Q23639 KO:K10612 OMA:EVTTFQM
NextBio:905286 Uniprot:Q23639
Length = 765
Score = 115 (45.5 bits), Expect = 7.5e-20, Sum P(4) = 7.5e-20
Identities = 31/107 (28%), Positives = 52/107 (48%)
Query: 116 FVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEE--KLVE 173
F ++ T+ YY +I N + + +YM A++ L++E+ R RYL+ N K +E
Sbjct: 187 FERQFIEQTTEYYKKICGNLLNELGVLEYMVYADKKLEEEQQRAKRYLEMNSPTSGKHME 246
Query: 174 KVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG 220
K L+ + +L + C L V+ L R+YR R R+G
Sbjct: 247 KAVIALVESFEDTILAE----CSKLIASKDVERLQRLYRLIRRTRSG 289
Score = 103 (41.3 bits), Expect = 7.5e-20, Sum P(4) = 7.5e-20
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 261 SEQLATFCDNILKKSG-NEKLSDEAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLF 319
+E LA +CD +L+K+ ++KL+ E I Y+ +KD+F F+R L+RRL+
Sbjct: 385 AELLANYCDLLLRKTQLSKKLTSEEIDEKLNQVLLVLKYVENKDVFMRFHRAHLSRRLIL 444
Query: 320 DRS 322
+ S
Sbjct: 445 EMS 447
Score = 103 (41.3 bits), Expect = 7.5e-20, Sum P(4) = 7.5e-20
Identities = 48/188 (25%), Positives = 87/188 (46%)
Query: 312 KLARRLLFDRSRTLARKNQTGFEKYLR-YNKNAHAGIDLSVTVLATGFWPSYKSSDLNPI 370
KL+R L + L + + F+K L N N +++ VL G W S +
Sbjct: 472 KLSRML---QDIELNKDMNSSFKKALTGTNNNKSIADSINMKVLNGGAWGRGGSERIR-- 526
Query: 371 FNLPSQMIKCVEVFKRFYETKTKHRKLSWIY--SLGQCHINAKFELKNIELIISTYHAAI 428
F+LP ++ V + FY+ + RKL W++ S G + +L +T+ A+
Sbjct: 527 FSLPRELEDFVPEMEAFYKKQHNGRKLCWMHHWSSGTM-VFGTANGGRFDLECTTFQMAV 585
Query: 429 LDLFN--ASNRLSYSQVITQLNLTHDDLVRLLHSLSILY----YKILIKEPDTKSISRSD 482
L FN A +++S + L +L R L SL + Y Y+IL+ + + +++ D
Sbjct: 586 LFCFNDRAHDKISLETLRLATELPDAELNRTLLSL-VAYPKMRYQILLCDVPSTTVTARD 644
Query: 483 YFELNSKF 490
+ + ++KF
Sbjct: 645 FTD-STKF 651
Score = 87 (35.7 bits), Expect = 7.5e-20, Sum P(4) = 7.5e-20
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK QL E +E+L +F P K K++I+ LI Y+ER ++ NTF
Sbjct: 711 RKTYTLAQLTMELVEILKPLFIPNRKIIKEQIDWLIENKYMERRADDINTF 761
>WB|WBGene00000841 [details] [associations]
symbol:cul-6 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0008340
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006974 GO:GO:0006511 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713 EMBL:Z77666
PIR:T23474 RefSeq:NP_502412.1 ProteinModelPortal:Q21346 SMR:Q21346
STRING:Q21346 EnsemblMetazoa:K08E7.7 GeneID:178214
KEGG:cel:CELE_K08E7.7 UCSC:K08E7.7 CTD:178214 WormBase:K08E7.7
InParanoid:Q21346 NextBio:900194 Uniprot:Q21346
Length = 729
Score = 137 (53.3 bits), Expect = 9.0e-20, Sum P(4) = 9.0e-20
Identities = 91/354 (25%), Positives = 141/354 (39%)
Query: 43 LHITIYNMCSQNTPNNNSASCKRRNIPGFDEFGLACFRDLVYDALKHKAKDAVIDERERE 102
L + + C +T N+ S + D + ++ F DA K K V++ +E
Sbjct: 155 LELILLERCG-STINSTHISSVVECLTELDIYKVS-FEPQFLDATKLFYKQEVLNSKET- 211
Query: 103 QVDRALLANVLDIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRY 162
V ++ +F E S Y STN +L D C + + LK R
Sbjct: 212 -VIEYMITVENRLFQEEY---RSRRYLGPSTNDLLIDSCESIL--ISDRLKFLHSEFERL 265
Query: 163 LQSNGEEKLVE------KVQHEL--LVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFY 214
L++ +E L +V H L L VY + + KE G L R K L + Y
Sbjct: 266 LEARKDEHLTRMYSLCRRVTHGLEDLRVYLEKRILKE--GHETLQRLAKDSGLKTTPKEY 323
Query: 215 RTIRAGPHDNYMEYVTNCFMDHSLFQRALKEAFKIFCNKTV---------GGFSSSEQLA 265
T H+ Y + F ++LF ++L +A K F S++ LA
Sbjct: 324 ITKLLEVHEIYFNLINKAFDRNALFMQSLDKASKDFIEANAVTMLAPEKHRSTRSADYLA 383
Query: 266 TFCDNILKKSGNEKLSDEAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRSRT- 324
+CD +LKK N K+ DE YIS+KD+F +Y+ + R++ + S +
Sbjct: 384 RYCDQLLKK--NSKVQDET---ALDKALTVLKYISEKDVFQLYYQNWFSERIINNSSASD 438
Query: 325 -LARK---NQTGFEKYLRYNKNAHAGI-DLSVTV-LATGFWP--SYKSSDLNPI 370
K N T E L Y +N + D ++ L T F + KS D N I
Sbjct: 439 DAEEKFITNLTATEG-LEYTRNLVKMVEDAKISKDLTTEFKDIKTEKSIDFNVI 491
Score = 129 (50.5 bits), Expect = 9.0e-20, Sum P(4) = 9.0e-20
Identities = 39/150 (26%), Positives = 69/150 (46%)
Query: 347 IDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQC 406
ID +V + TG WPS D I LP ++ ++ F FY R+L+W YS +
Sbjct: 486 IDFNVILQTTGAWPSL---DQIKII-LPRELSTILKEFDTFYNASHNGRRLNWAYSQCRG 541
Query: 407 HINAK-FELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSILY 465
+N+K FE K + I++ L LFN + + Q+ + +T ++ SL+ +
Sbjct: 542 EVNSKAFEKKYV-FIVTASQLCTLYLFNEQDSFTIEQISKAIEMTAKSTSAIVGSLNPVI 600
Query: 466 YKILI--KEPDTKSISRSDYFELNSKFTDR 493
+L+ K + LN+K+ ++
Sbjct: 601 DPVLVVDKGNEKDGYPPDAVVSLNTKYANK 630
Score = 74 (31.1 bits), Expect = 9.0e-20, Sum P(4) = 9.0e-20
Identities = 20/51 (39%), Positives = 25/51 (49%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK L H L++E I L F P V+ K IE LI Q Y+ R N +
Sbjct: 675 RKSLTHTLLINEIISQLKSRFTPNVQMIKICIEILIEQLYIRRSENEHNVY 725
Score = 64 (27.6 bits), Expect = 9.0e-20, Sum P(4) = 9.0e-20
Identities = 19/51 (37%), Positives = 26/51 (50%)
Query: 13 WEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMCSQNT---PNNNS 60
W +Q G+ L R RE S + YM L+ +YN+C+ T NNNS
Sbjct: 7 WGTLQDGLNLLYR-----REH-MSKKYYMMLYDAVYNICTTTTLANSNNNS 51
>WB|WBGene00000836 [details] [associations]
symbol:cul-1 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040015 "negative regulation of
multicellular organism growth" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0007067
"mitosis" evidence=IMP] [GO:0008406 "gonad development"
evidence=IMP] [GO:0016477 "cell migration" evidence=IMP]
[GO:0045930 "negative regulation of mitotic cell cycle"
evidence=IMP] [GO:0008361 "regulation of cell size" evidence=IMP]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0043066 GO:GO:0008285
GO:GO:0051301 GO:GO:0016477 GO:GO:0008406 GO:GO:0007067
GO:GO:0002119 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006974
GO:GO:0008361 GO:GO:0016567 GO:GO:0040015 GO:GO:0006511
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 GO:GO:0045930
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176713 KO:K03347 OMA:LDEGHEN EMBL:U58083 EMBL:Z35639
PIR:T20365 RefSeq:NP_499309.1 UniGene:Cel.6661
ProteinModelPortal:Q17389 SMR:Q17389 STRING:Q17389 PaxDb:Q17389
EnsemblMetazoa:D2045.6 GeneID:176466 KEGG:cel:CELE_D2045.6
UCSC:D2045.6 CTD:176466 WormBase:D2045.6 InParanoid:Q17389
NextBio:892698 Uniprot:Q17389
Length = 780
Score = 143 (55.4 bits), Expect = 4.5e-19, Sum P(4) = 4.5e-19
Identities = 40/159 (25%), Positives = 74/159 (46%)
Query: 324 TLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEV 383
T K+ T K + + ++ +V VL++G WP++ ++ PI LP Q+ K +E+
Sbjct: 515 TQVSKDLTADFKEKKADMLGQKSVEFNVLVLSSGSWPTFPTT---PI-TLPQQLSKTIEI 570
Query: 384 FKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQV 443
F +FY K R+L+W+YS + I + K +T + LFN + + Q+
Sbjct: 571 FGQFYNEKFNGRRLTWVYSQSRGEITSTAFPKKYVFTATTAQMCTMLLFNEQDSYTVEQI 630
Query: 444 ITQLNLTHDDLVRLLHSLSILYYKILIKEPDTKSISRSD 482
+ ++ SL K L+ + DT+ + + D
Sbjct: 631 AAATKMDEKSAPAIVGSL----IKNLVLKADTE-LQKED 664
Score = 121 (47.7 bits), Expect = 4.5e-19, Sum P(4) = 4.5e-19
Identities = 34/111 (30%), Positives = 52/111 (46%)
Query: 222 HDNYMEYVTNCFMDHSLFQRALKEAFKIFCNKTVGG---------FSSSEQLATFCDNIL 272
H+ Y V F + F ++L +A F N S+E LA +CD +L
Sbjct: 375 HERYQSLVNRSFKNEPGFMQSLDKAATSFINNNAVTKRAPPQAQLTKSAELLARYCDQLL 434
Query: 273 KKSGNEKLSDEA-IXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRS 322
+KS K+ DEA + YI DKD+F++FY K ++RL+ + S
Sbjct: 435 RKSS--KMPDEAELEELQTKIMVVFKYIDDKDVFSKFYTKMFSKRLISELS 483
Score = 99 (39.9 bits), Expect = 7.4e-17, Sum P(4) = 7.4e-17
Identities = 40/157 (25%), Positives = 67/157 (42%)
Query: 96 IDERE---REQVDRALLANVLDIFVEHMLQDTSSYYSRISTNWILKDP-CPDYMRKAEEC 151
+D+ E ++ + LA + F L+ T +Y++ + N++ DYM K E
Sbjct: 209 VDDSETDAKKDAETKKLAVYKEFFEVKFLEATRGFYTQEAANFLSNGGNVTDYMIKVETR 268
Query: 152 LKKERDRVSRYLQSNGEEKLVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMY 211
L +E DR YL S+ + L + L+ + L+ Q G L + DDLSRM+
Sbjct: 269 LNQEDDRCQLYLNSSTKTPLATCCESVLI----SNQLDFLQRHFGGLLVDKRDDDLSRMF 324
Query: 212 RFYRTIRAGPHDNYMEYVTNCFMD--HSLFQRALKEA 246
+ + G D + + N H +R EA
Sbjct: 325 KLCDRVPNGL-DELRKSLENHIAKEGHQALERVAMEA 360
Score = 85 (35.0 bits), Expect = 4.5e-19, Sum P(4) = 4.5e-19
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLER 546
RK + HQQL++E I L FKP V+ K+ I LI ++Y+ R
Sbjct: 726 RKRVQHQQLMTEVITQLSGRFKPKVEMIKRCIGSLIEKEYMLR 768
Score = 50 (22.7 bits), Expect = 5.9e-12, Sum P(4) = 5.9e-12
Identities = 15/56 (26%), Positives = 30/56 (53%)
Query: 129 SRISTNWILKDPCPD-YMRKAEECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVY 183
S I+ N + K P + K+ E L + D++ R +E +E++Q +++VV+
Sbjct: 402 SFINNNAVTKRAPPQAQLTKSAELLARYCDQLLRKSSKMPDEAELEELQTKIMVVF 457
Score = 49 (22.3 bits), Expect = 4.5e-19, Sum P(4) = 4.5e-19
Identities = 10/36 (27%), Positives = 21/36 (58%)
Query: 24 KRILEGL----REPPFSSEEYMALHITIYNMCSQNT 55
K++ +GL R + ++YM L+ ++Y+ C+ T
Sbjct: 18 KKLQDGLDVAYRRENMAPKDYMTLYTSVYDYCTSIT 53
Score = 48 (22.0 bits), Expect = 5.1e-07, Sum P(4) = 5.1e-07
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 303 DLFAEFYRKKL-ARRLLFDRSRTLARKNQTGF-EKYL 337
++F +FY +K RRL + S++ T F +KY+
Sbjct: 569 EIFGQFYNEKFNGRRLTWVYSQSRGEITSTAFPKKYV 605
Score = 42 (19.8 bits), Expect = 3.7e-11, Sum P(4) = 3.7e-11
Identities = 21/108 (19%), Positives = 50/108 (46%)
Query: 85 DALKHKAKDAVIDEREREQVDRALLANVLD--IFVEHMLQDTSSYYSRISTNWILKDPCP 142
D L+ ++ + E + ++R + D ++V+ +L+ Y S ++ ++ K+ P
Sbjct: 335 DELRKSLENHIAKEGH-QALERVAMEAATDAKLYVKTLLEVHERYQSLVNRSF--KNE-P 390
Query: 143 DYMRKAEECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVYATQLLEK 190
+M+ ++ + + ++ + +L + ELL Y QLL K
Sbjct: 391 GFMQSLDKAATSFINNNAVTKRAPPQAQLTKSA--ELLARYCDQLLRK 436
Score = 37 (18.1 bits), Expect = 5.9e-06, Sum P(4) = 5.9e-06
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 382 EVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNI 417
+VF +FY R +S + + + N +LK++
Sbjct: 464 DVFSKFYTKMFSKRLISELSASDEAEANFITKLKSM 499
>UNIPROTKB|F1SR60 [details] [associations]
symbol:F1SR60 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00884 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
GeneTree:ENSGT00550000074299 Ensembl:ENSSSCT00000017678 OMA:FNHRARI
Uniprot:F1SR60
Length = 308
Score = 124 (48.7 bits), Expect = 9.1e-19, Sum P(3) = 9.1e-19
Identities = 25/77 (32%), Positives = 43/77 (55%)
Query: 336 YLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHR 395
+ + + + G+DL+V VL TG+WP+ ++ P N+P E+F+RFY K R
Sbjct: 30 FFSFTQVSLGGVDLTVRVLTTGYWPTQSAT---PKCNIPPAPRHAFEIFRRFYLAKHSGR 86
Query: 396 KLSWIYSLGQCHINAKF 412
+L+ + +G +NA F
Sbjct: 87 QLTLQHHMGSADLNATF 103
Score = 112 (44.5 bits), Expect = 9.1e-19, Sum P(3) = 9.1e-19
Identities = 27/94 (28%), Positives = 49/94 (52%)
Query: 403 LGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLS 462
+G + K+I L +ST+ IL LFN + ++ ++ + ++ +LVR L SL+
Sbjct: 117 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 175
Query: 463 I--LYYKILIKEPDTKSISRSDYFELNSKFTDRM 494
++L KEP +K I F +N +FT ++
Sbjct: 176 CGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKL 209
Score = 102 (41.0 bits), Expect = 9.1e-19, Sum P(3) = 9.1e-19
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK + H LV+E + L F P+ KKRIEGLI ++YL R PE+ +
Sbjct: 254 RKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVY 304
>UNIPROTKB|F1RUC1 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
Pfam:PF00888 PROSITE:PS50069 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 EMBL:CU693400
Ensembl:ENSSSCT00000013782 OMA:SSTERED Uniprot:F1RUC1
Length = 700
Score = 170 (64.9 bits), Expect = 2.2e-18, Sum P(3) = 2.2e-18
Identities = 49/181 (27%), Positives = 92/181 (50%)
Query: 68 IPGFDEFGLACFR-DLVYDA-LKHKAKDAVI--DERER--EQVDRALLANVL-------- 113
+P + GL FR ++ D +++K D ++ ERER E +DR+LL ++L
Sbjct: 374 LPSIWDMGLELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSLLSMLSDLQI 433
Query: 114 --DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKL 171
D F + L++T+ Y+ + + P+Y+ + L++E DR+ YL ++ L
Sbjct: 434 YQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTTQKSL 493
Query: 172 VEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAGPH---DNYMEY 228
+ V+ +LL + T +L+K G L N++ DLS +Y+ + +R G ++EY
Sbjct: 494 IATVEKQLLGEHLTAILQK---GLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIEY 550
Query: 229 V 229
+
Sbjct: 551 I 551
Score = 140 (54.3 bits), Expect = 2.2e-18, Sum P(3) = 2.2e-18
Identities = 34/99 (34%), Positives = 56/99 (56%)
Query: 232 CFMDHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSGNEKLSDEAIXXXXXX 291
CF+ + F A+KEAF+ F NK +E +A + D+ L+ +GN++ +DE +
Sbjct: 586 CFLKNEKFINAMKEAFETFINKRPN--KPAELIAKYVDSKLR-AGNKEATDEELEKMLDK 642
Query: 292 XXXXXXYISDKDLFAEFYRKKLARRLLFDRSRTL-ARKN 329
+I KD+F FY+K LA+RLL +S ++ A K+
Sbjct: 643 IMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKS 681
Score = 37 (18.1 bits), Expect = 2.2e-18, Sum P(3) = 2.2e-18
Identities = 12/49 (24%), Positives = 19/49 (38%)
Query: 10 DEGWEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMCSQNTPNN 58
DE W+ KLK +E ++ L+ + N+CS N
Sbjct: 267 DETWQ-------KLKEAVEAIQNSTSIKYNLEELYQAVENLCSYKISAN 308
>WB|WBGene00000839 [details] [associations]
symbol:cul-4 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0006260 "DNA replication" evidence=IMP]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0008340 GO:GO:0002009 GO:GO:0040010 GO:GO:0006260
GO:GO:0040011 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0040035 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K10609 EMBL:FO080734 EMBL:U58086
PIR:T16367 RefSeq:NP_495525.2 ProteinModelPortal:Q17392 SMR:Q17392
IntAct:Q17392 STRING:Q17392 PaxDb:Q17392 EnsemblMetazoa:F45E12.3
GeneID:174198 KEGG:cel:CELE_F45E12.3 UCSC:F45E12.3 CTD:35780
WormBase:F45E12.3 InParanoid:Q17392 OMA:ERIFCSS NextBio:882965
Uniprot:Q17392
Length = 840
Score = 125 (49.1 bits), Expect = 1.2e-17, Sum P(4) = 1.2e-17
Identities = 42/175 (24%), Positives = 83/175 (47%)
Query: 333 FEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKT 392
F +YL + A + + V+ +WP+Y + ++N +P +M + ++ FY +
Sbjct: 579 FNQYLEHMNKEKA--NFTARVITPEYWPTYDTYEIN----IPKEMRDTLTDYQDFYRVQH 632
Query: 393 KHRKLSWIYSLGQCHINAKFE--LKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLT 450
+R + W + L I+A F K ELI + Y IL LFN + ++++ +
Sbjct: 633 GNRNVKWHHGLASAVISASFRPGCKK-ELIATMYQTVILLLFNKCETWTVAEIVEHTKIL 691
Query: 451 HDDLVRLLHSLSIL----YYKILI--------KEPDTKSISRSDYFELNSKFTDR 493
++V+ + L++L K+L K+ T +++ F +NSKFT++
Sbjct: 692 EIEVVK--NVLALLGGRDKPKVLQRVEGGGSEKKEGTVENLKNEKFVVNSKFTEK 744
Score = 97 (39.2 bits), Expect = 1.2e-17, Sum P(4) = 1.2e-17
Identities = 25/87 (28%), Positives = 46/87 (52%)
Query: 240 QRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSGNEKLSDEA-IXXXXXXXXXXXXY 298
++ L +AF+ F NK V S+E ++ +L S N+ +SD+ + Y
Sbjct: 457 RQCLSDAFESFVNKQVD--RSAELISKHFHTLLHSS-NKNVSDDTTLDQMVDEAIVLFRY 513
Query: 299 ISDKDLFAEFYRKKLARRLLFDRSRTL 325
+ KD+F +Y++ LA+RL +RS ++
Sbjct: 514 LRGKDVFEAYYKRGLAKRLFLERSASV 540
Score = 89 (36.4 bits), Expect = 1.2e-17, Sum P(4) = 1.2e-17
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK L HQ L++E ++ L F + KKR+E LI ++Y+ R PE +++
Sbjct: 788 RKQLNHQTLMTELLQQL--RFPVSTADIKKRLESLIEREYISRDPEEASSY 836
Score = 76 (31.8 bits), Expect = 1.2e-17, Sum P(4) = 1.2e-17
Identities = 32/152 (21%), Positives = 62/152 (40%)
Query: 71 FDEFGLACFRDLVYDALKHKAKDAVIDEREREQVDRALLANVLDIFVEHMLQDTSSYYSR 130
F EF + +Y A++ + +D R VD +V + F + ++ +Y+
Sbjct: 253 FKEFKATKLFNALYMAMQKIMQRYPVDSPLRSLVDMLQTVHVSEEFAKFLISQLREHYNN 312
Query: 131 ISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEE-KLVEKVQHELLVVYATQLL- 188
+ + K C DYM E+ + +R S+ ++ N +E ++ VQ + Q +
Sbjct: 313 ERIDKVPKMNCNDYMEYCEDQI----NRYSQLVKVNFDEPSALKDVQATVTNCLIQQAIP 368
Query: 189 EKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG 220
E L + + D+ RM+ R G
Sbjct: 369 EILTHDFDDLIDSDNISDIGRMFNLCRQCVGG 400
Score = 40 (19.1 bits), Expect = 5.1e-14, Sum P(4) = 5.1e-14
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 156 RDRVSRYLQSNGEEKLVEKVQHELLV 181
R + S+YL+ GE KL+ E LV
Sbjct: 405 RTQFSKYLKKRGE-KLIATCPDEDLV 429
>ZFIN|ZDB-GENE-030131-5426 [details] [associations]
symbol:cul5a "cullin 5a" species:7955 "Danio
rerio" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-030131-5426 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:BX572630
IPI:IPI00836478 Ensembl:ENSDART00000110111 ArrayExpress:F1REN0
Bgee:F1REN0 Uniprot:F1REN0
Length = 780
Score = 144 (55.7 bits), Expect = 1.5e-16, Sum P(3) = 1.5e-16
Identities = 56/217 (25%), Positives = 104/217 (47%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLN 368
Y KLAR +F + NQ F++ ++NK A +++ +L G W +SS+
Sbjct: 489 YVNKLAR--MFQDIKVSEDLNQV-FKEMHKHNKLALPADSVNIKILNAGAWS--RSSE-- 541
Query: 369 PIF-NLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAA 427
+F +LP+++ + + FY+ RKL W + + I K E+ +L ++T+ A
Sbjct: 542 KVFVSLPTELEDLIPEVEDFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLA 601
Query: 428 ILDLFNASNR--LSYSQVITQLNLTHDDLVRLLHSLSI---LYYKILIKEPDT---KSIS 479
+L +N R +S+ + L +L R L SL L ++L+ EP K +
Sbjct: 602 VLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVSSPKDFT 661
Query: 480 RSDYFELNSKFTDRMRGSRSLSHHR-KVLGHQQLVSE 515
S F +N +F+ ++ S++ + ++G QL +E
Sbjct: 662 DSTLFFVNQEFS-LIKNSKAQKRGKINLIGRLQLTTE 697
Score = 104 (41.7 bits), Expect = 3.6e-12, Sum P(3) = 3.6e-12
Identities = 39/139 (28%), Positives = 62/139 (44%)
Query: 235 DHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSG-NEKLSDEAIXXXXXXXX 293
D ++F+ L K KT E LA +CD +L+K+ ++KL+ E I
Sbjct: 379 DATIFKLELPMKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEDIELKLKEVL 438
Query: 294 XXXXYISDKDLFAEFYRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLS-VT 352
Y+ +KD+F +++ L RRL+ D S + + ++LR G+ V
Sbjct: 439 LVLKYVQNKDVFMRYHKAHLTRRLILDISAD--SEIEENMVEWLR-----EVGMPADYVN 491
Query: 353 VLATGFWPSYKSSDLNPIF 371
LA F S DLN +F
Sbjct: 492 KLARMFQDIKVSEDLNQVF 510
Score = 95 (38.5 bits), Expect = 1.5e-16, Sum P(3) = 1.5e-16
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK + + QL +E +E+L MF P K K++IE LI Y++R + NTF
Sbjct: 726 RKKITNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIKRDETDINTF 776
Score = 94 (38.1 bits), Expect = 1.5e-16, Sum P(3) = 1.5e-16
Identities = 23/98 (23%), Positives = 46/98 (46%)
Query: 114 DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVE 173
D F + L T +Y + +++ ++ +YM+ A+ L++E R RYL++ E V+
Sbjct: 200 DNFEKSYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLREEEKRALRYLETRRECNSVQ 259
Query: 174 KVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMY 211
+ + T E + C + + N+ D L M+
Sbjct: 260 ALMECCVNALVTSFKETILAECPGMIKRNETDKLHLMF 297
>FB|FBgn0032956 [details] [associations]
symbol:Cul-2 "Cullin-2" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:0007295 "growth of a germarium-derived egg chamber"
evidence=IMP] [GO:0008582 "regulation of synaptic growth at
neuromuscular junction" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 EMBL:AE014134 GO:GO:0022008
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031461 GO:GO:0008582 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0007295
HSSP:Q9JLV5 CTD:35420 KO:K03870 OMA:VMLDYVE EMBL:AY061434
RefSeq:NP_610117.1 RefSeq:NP_724352.1 UniGene:Dm.6467 SMR:Q9V9R2
IntAct:Q9V9R2 MINT:MINT-904022 STRING:Q9V9R2
EnsemblMetazoa:FBtr0085899 EnsemblMetazoa:FBtr0085900 GeneID:35420
KEGG:dme:Dmel_CG1512 UCSC:CG1512-RA FlyBase:FBgn0032956
InParanoid:Q9V9R2 OrthoDB:EOG4HDR8R GenomeRNAi:35420 NextBio:793437
Uniprot:Q9V9R2
Length = 753
Score = 166 (63.5 bits), Expect = 3.6e-16, Sum P(3) = 3.6e-16
Identities = 51/187 (27%), Positives = 94/187 (50%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLN 368
+ KL R+ D S ++ N+ F +L+ + N GI+L++ VL G WP S+ +
Sbjct: 481 FTNKL-HRMFTDISVSVDLNNK--FNTHLK-DSNVDLGINLAIKVLQAGAWP-LGSTQVI 535
Query: 369 PIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKFE-LKNIELI-ISTYHA 426
P F +P + K +++F+ +Y RKL+W++ + CH K LK ++ + TY
Sbjct: 536 P-FAVPQEFEKSIKMFEDYYHKLFSGRKLTWLHHM--CHGELKLSHLKKSYIVTMQTYQM 592
Query: 427 AILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSILYYKILIKEPDTKSISRSDYFEL 486
AI+ LF + LS ++ L L + + H I+ K+L +++++ EL
Sbjct: 593 AIILLFETCDSLSCREIQNTLQLNDETFQK--HMQPIIESKLL--NASSENLAGETRIEL 648
Query: 487 NSKFTDR 493
N +T++
Sbjct: 649 NLDYTNK 655
Score = 143 (55.4 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 49/167 (29%), Positives = 80/167 (47%)
Query: 222 HDNYMEYVTNCFMDHSLFQRALKEAFKIFCNKTVGGFS---SSEQLATFCDNILKKSGNE 278
H Y E + + F + SLF AL +A N+ S+E +A +CD +LKKS
Sbjct: 360 HHKYQELIADVFENDSLFLSALDKACASVINRRPTERQPCRSAEYVAKYCDTLLKKS--- 416
Query: 279 KLSDEAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRSRTL-ARKNQTGFEK-- 335
K + I YI DKD++ +FY + LA+RL+ ++S+++ A + K
Sbjct: 417 KTCEAEIDQKLTNNITIFKYIEDKDVYQKFYSRLLAKRLIHEQSQSMDAEEGMINRLKQA 476
Query: 336 --YLRYNKNAHAGIDLSVTV-LATGFWPSYKSSDLNPIFNLPSQMIK 379
Y NK D+SV+V L F K S+++ NL ++++
Sbjct: 477 CGYEFTNKLHRMFTDISVSVDLNNKFNTHLKDSNVDLGINLAIKVLQ 523
Score = 86 (35.3 bits), Expect = 3.6e-16, Sum P(3) = 3.6e-16
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLER 546
RKVL H L+ E + L F P + KK +E LI + Y+ER
Sbjct: 699 RKVLKHNALIQEVLSLSKVSFTPNIAMIKKCVESLIDKQYIER 741
Score = 75 (31.5 bits), Expect = 3.6e-16, Sum P(3) = 3.6e-16
Identities = 27/123 (21%), Positives = 53/123 (43%)
Query: 114 DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVE 173
++F ML+ + +YY+ + + + +YM++ L+ E R ++L + KL +
Sbjct: 217 ELFEGPMLEASGAYYTDEANKLLHRCSVSEYMQEVIRILEYESRRAQKFLHVSSLPKLRK 276
Query: 174 KVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAGPHDNYMEYVTNCF 233
+ + + + L S C + + DL MY + I P DN + F
Sbjct: 277 ECEEKFI----NDRLGFIYSECREMVSEERRQDLRNMYVVLKPI---P-DNLKSELITTF 328
Query: 234 MDH 236
+DH
Sbjct: 329 LDH 331
>UNIPROTKB|F1N7B5 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031466 "Cul5-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031466 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:EVTTFQM EMBL:DAAA02040193
EMBL:DAAA02040192 IPI:IPI00924344 Ensembl:ENSBTAT00000061240
ArrayExpress:F1N7B5 Uniprot:F1N7B5
Length = 759
Score = 137 (53.3 bits), Expect = 4.0e-16, Sum P(3) = 4.0e-16
Identities = 54/217 (24%), Positives = 101/217 (46%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLN 368
Y KLAR +F + NQ F++ + NK A +++ +L G W +SS+
Sbjct: 468 YVNKLAR--MFQDIKVSEDLNQA-FKEMHKNNKLALPADSVNIKILNAGAWS--RSSE-- 520
Query: 369 PIF-NLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAA 427
+F +LP+++ + + FY+ RKL W + + I K E+ +L ++T+ A
Sbjct: 521 KVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLA 580
Query: 428 ILDLFNASNR--LSYSQVITQLNLTHDDLVRLLHSLSI---LYYKILIKEPDT---KSIS 479
+L +N R +S+ + L +L R L SL L ++L+ EP K +
Sbjct: 581 VLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKDFT 640
Query: 480 RSDYFELNSKFTDRMRGSRSLSHHR-KVLGHQQLVSE 515
F +N +F+ ++ ++ + ++G QL +E
Sbjct: 641 EGTLFSVNQEFS-LIKNAKVQKRGKINLIGRLQLTTE 676
Score = 101 (40.6 bits), Expect = 3.4e-12, Sum P(3) = 3.4e-12
Identities = 39/139 (28%), Positives = 61/139 (43%)
Query: 235 DHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSG-NEKLSDEAIXXXXXXXX 293
D ++F+ L K KT E LA +CD +L+K+ ++KL+ E I
Sbjct: 358 DATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVL 417
Query: 294 XXXXYISDKDLFAEFYRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLS-VT 352
Y+ +KD+F +++ L RRL+ D S + + ++LR G+ V
Sbjct: 418 LVLKYVQNKDVFMRYHKAHLTRRLILDISAD--SEIEENMVEWLR-----EVGMPADYVN 470
Query: 353 VLATGFWPSYKSSDLNPIF 371
LA F S DLN F
Sbjct: 471 KLARMFQDIKVSEDLNQAF 489
Score = 97 (39.2 bits), Expect = 4.0e-16, Sum P(3) = 4.0e-16
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK + + QL +E +E+L MF P K K++IE LI Y+ R + NTF
Sbjct: 705 RKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTF 755
Score = 95 (38.5 bits), Expect = 4.0e-16, Sum P(3) = 4.0e-16
Identities = 24/98 (24%), Positives = 46/98 (46%)
Query: 114 DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVE 173
D F + L T +Y + +++ ++ +YM+ A+ LK+E R RYL++ E VE
Sbjct: 179 DNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVE 238
Query: 174 KVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMY 211
+ + T E + C + + N+ + L M+
Sbjct: 239 ALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMF 276
Score = 43 (20.2 bits), Expect = 7.8e-11, Sum P(3) = 7.8e-11
Identities = 24/86 (27%), Positives = 35/86 (40%)
Query: 212 RFYRT-----IRAGPHDNYMEYVTNCFMDHSLFQRALK-----------EAFKIFC-NKT 254
RFYRT ++ NYM+Y + +RAL+ EA C N
Sbjct: 191 RFYRTQAPSYLQQNGVQNYMKYADAKLKEEE--KRALRYLETRRECNSVEALMECCVNAL 248
Query: 255 VGGFSSSEQLATFCDNILKKSGNEKL 280
V F E + C ++K++ EKL
Sbjct: 249 VTSFK--ETILAECQGMIKRNETEKL 272
>UNIPROTKB|J9PAX0 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:EVTTFQM EMBL:AAEX03003515
Ensembl:ENSCAFT00000043293 Uniprot:J9PAX0
Length = 759
Score = 137 (53.3 bits), Expect = 4.0e-16, Sum P(3) = 4.0e-16
Identities = 54/217 (24%), Positives = 101/217 (46%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLN 368
Y KLAR +F + NQ F++ + NK A +++ +L G W +SS+
Sbjct: 468 YVNKLAR--MFQDIKVSEDLNQA-FKEMHKNNKLALPADSVNIKILNAGAWS--RSSE-- 520
Query: 369 PIF-NLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAA 427
+F +LP+++ + + FY+ RKL W + + I K E+ +L ++T+ A
Sbjct: 521 KVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLA 580
Query: 428 ILDLFNASNR--LSYSQVITQLNLTHDDLVRLLHSLSI---LYYKILIKEPDT---KSIS 479
+L +N R +S+ + L +L R L SL L ++L+ EP K +
Sbjct: 581 VLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKDFT 640
Query: 480 RSDYFELNSKFTDRMRGSRSLSHHR-KVLGHQQLVSE 515
F +N +F+ ++ ++ + ++G QL +E
Sbjct: 641 EGTLFSVNQEFS-LIKNAKVQKRGKINLIGRLQLTTE 676
Score = 101 (40.6 bits), Expect = 3.4e-12, Sum P(3) = 3.4e-12
Identities = 39/139 (28%), Positives = 61/139 (43%)
Query: 235 DHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSG-NEKLSDEAIXXXXXXXX 293
D ++F+ L K KT E LA +CD +L+K+ ++KL+ E I
Sbjct: 358 DATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVL 417
Query: 294 XXXXYISDKDLFAEFYRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLS-VT 352
Y+ +KD+F +++ L RRL+ D S + + ++LR G+ V
Sbjct: 418 LVLKYVQNKDVFMRYHKAHLTRRLILDISAD--SEIEENMVEWLR-----EVGMPADYVN 470
Query: 353 VLATGFWPSYKSSDLNPIF 371
LA F S DLN F
Sbjct: 471 KLARMFQDIKVSEDLNQAF 489
Score = 97 (39.2 bits), Expect = 4.0e-16, Sum P(3) = 4.0e-16
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK + + QL +E +E+L MF P K K++IE LI Y+ R + NTF
Sbjct: 705 RKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTF 755
Score = 95 (38.5 bits), Expect = 4.0e-16, Sum P(3) = 4.0e-16
Identities = 24/98 (24%), Positives = 46/98 (46%)
Query: 114 DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVE 173
D F + L T +Y + +++ ++ +YM+ A+ LK+E R RYL++ E VE
Sbjct: 179 DNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVE 238
Query: 174 KVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMY 211
+ + T E + C + + N+ + L M+
Sbjct: 239 ALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMF 276
Score = 43 (20.2 bits), Expect = 7.8e-11, Sum P(3) = 7.8e-11
Identities = 24/86 (27%), Positives = 35/86 (40%)
Query: 212 RFYRT-----IRAGPHDNYMEYVTNCFMDHSLFQRALK-----------EAFKIFC-NKT 254
RFYRT ++ NYM+Y + +RAL+ EA C N
Sbjct: 191 RFYRTQAPSYLQQNGVQNYMKYADAKLKEEE--KRALRYLETRRECNSVEALMECCVNAL 248
Query: 255 VGGFSSSEQLATFCDNILKKSGNEKL 280
V F E + C ++K++ EKL
Sbjct: 249 VTSFK--ETILAECQGMIKRNETEKL 272
>UNIPROTKB|Q93034 [details] [associations]
symbol:CUL5 "Cullin-5" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006970 "response to osmotic stress"
evidence=IEA] [GO:0051480 "cytosolic calcium ion homeostasis"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IDA] [GO:0031466 "Cul5-RING
ubiquitin ligase complex" evidence=IDA] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0004872
"receptor activity" evidence=TAS] [GO:0005262 "calcium channel
activity" evidence=TAS] [GO:0007050 "cell cycle arrest"
evidence=TAS] [GO:0008283 "cell proliferation" evidence=TAS]
[GO:0008285 "negative regulation of cell proliferation"
evidence=TAS] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0070588 "calcium ion
transmembrane transport" evidence=TAS] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005829
GO:GO:0005634 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0008285 GO:GO:0016032
EMBL:CH471065 GO:GO:0000082 GO:GO:0008283 GO:GO:0005262
GO:GO:0004872 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007050
GO:GO:0016567 GO:GO:0006970 GO:GO:0006511 GO:GO:0051480
GO:GO:0097193 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031466
GO:GO:0031625 InterPro:IPR016159 SUPFAM:SSF74788
HOGENOM:HOG000007610 KO:K10612 OMA:EVTTFQM EMBL:X81882
EMBL:AF017061 EMBL:AF327710 EMBL:AK292575 EMBL:BC063306
IPI:IPI00216003 RefSeq:NP_003469.2 UniGene:Hs.440320
UniGene:Hs.701122 PDB:3DPL PDB:3DQV PDBsum:3DPL PDBsum:3DQV
ProteinModelPortal:Q93034 SMR:Q93034 DIP:DIP-43696N IntAct:Q93034
MINT:MINT-1184052 STRING:Q93034 PhosphoSite:Q93034 DMDM:14917099
PaxDb:Q93034 PRIDE:Q93034 Ensembl:ENST00000393094
Ensembl:ENST00000531427 GeneID:8065 KEGG:hsa:8065 UCSC:uc001pjv.3
CTD:8065 GeneCards:GC11P107913 HGNC:HGNC:2556 HPA:CAB017787
HPA:HPA002185 MIM:601741 neXtProt:NX_Q93034 PharmGKB:PA27052
HOVERGEN:HBG099672 InParanoid:Q93034 OrthoDB:EOG46Q6RZ
PhylomeDB:Q93034 EvolutionaryTrace:Q93034 GenomeRNAi:8065
NextBio:30655 ArrayExpress:Q93034 Bgee:Q93034 CleanEx:HS_CUL5
Genevestigator:Q93034 GermOnline:ENSG00000166266 Uniprot:Q93034
Length = 780
Score = 137 (53.3 bits), Expect = 4.3e-16, Sum P(4) = 4.3e-16
Identities = 54/217 (24%), Positives = 101/217 (46%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLN 368
Y KLAR +F + NQ F++ + NK A +++ +L G W +SS+
Sbjct: 489 YVNKLAR--MFQDIKVSEDLNQA-FKEMHKNNKLALPADSVNIKILNAGAWS--RSSE-- 541
Query: 369 PIF-NLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAA 427
+F +LP+++ + + FY+ RKL W + + I K E+ +L ++T+ A
Sbjct: 542 KVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLA 601
Query: 428 ILDLFNASNR--LSYSQVITQLNLTHDDLVRLLHSLSI---LYYKILIKEPDT---KSIS 479
+L +N R +S+ + L +L R L SL L ++L+ EP K +
Sbjct: 602 VLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKDFT 661
Query: 480 RSDYFELNSKFTDRMRGSRSLSHHR-KVLGHQQLVSE 515
F +N +F+ ++ ++ + ++G QL +E
Sbjct: 662 EGTLFSVNQEFS-LIKNAKVQKRGKINLIGRLQLTTE 697
Score = 101 (40.6 bits), Expect = 3.8e-12, Sum P(4) = 3.8e-12
Identities = 39/139 (28%), Positives = 61/139 (43%)
Query: 235 DHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSG-NEKLSDEAIXXXXXXXX 293
D ++F+ L K KT E LA +CD +L+K+ ++KL+ E I
Sbjct: 379 DATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVL 438
Query: 294 XXXXYISDKDLFAEFYRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLS-VT 352
Y+ +KD+F +++ L RRL+ D S + + ++LR G+ V
Sbjct: 439 LVLKYVQNKDVFMRYHKAHLTRRLILDISAD--SEIEENMVEWLR-----EVGMPADYVN 491
Query: 353 VLATGFWPSYKSSDLNPIF 371
LA F S DLN F
Sbjct: 492 KLARMFQDIKVSEDLNQAF 510
Score = 97 (39.2 bits), Expect = 4.3e-16, Sum P(4) = 4.3e-16
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK + + QL +E +E+L MF P K K++IE LI Y+ R + NTF
Sbjct: 726 RKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTF 776
Score = 95 (38.5 bits), Expect = 4.3e-16, Sum P(4) = 4.3e-16
Identities = 24/98 (24%), Positives = 46/98 (46%)
Query: 114 DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVE 173
D F + L T +Y + +++ ++ +YM+ A+ LK+E R RYL++ E VE
Sbjct: 200 DNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVE 259
Query: 174 KVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMY 211
+ + T E + C + + N+ + L M+
Sbjct: 260 ALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMF 297
Score = 43 (20.2 bits), Expect = 6.7e-11, Sum P(4) = 6.7e-11
Identities = 24/86 (27%), Positives = 35/86 (40%)
Query: 212 RFYRT-----IRAGPHDNYMEYVTNCFMDHSLFQRALK-----------EAFKIFC-NKT 254
RFYRT ++ NYM+Y + +RAL+ EA C N
Sbjct: 212 RFYRTQAPSYLQQNGVQNYMKYADAKLKEEE--KRALRYLETRRECNSVEALMECCVNAL 269
Query: 255 VGGFSSSEQLATFCDNILKKSGNEKL 280
V F E + C ++K++ EKL
Sbjct: 270 VTSFK--ETILAECQGMIKRNETEKL 293
Score = 40 (19.1 bits), Expect = 4.3e-16, Sum P(4) = 4.3e-16
Identities = 8/45 (17%), Positives = 25/45 (55%)
Query: 7 IEFDEGWEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMC 51
++F++ W++++ + KL LR+ + +++ L ++ +C
Sbjct: 13 LQFEDKWDFMRPIVLKL------LRQESVTKQQWFDLFSDVHAVC 51
>UNIPROTKB|I3LFR2 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031466 "Cul5-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031466 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K10612 OMA:EVTTFQM CTD:8065
EMBL:FP340346 RefSeq:XP_003357323.1 ProteinModelPortal:I3LFR2
SMR:I3LFR2 PRIDE:I3LFR2 Ensembl:ENSSSCT00000029949 GeneID:100525708
KEGG:ssc:100525708 Uniprot:I3LFR2
Length = 780
Score = 137 (53.3 bits), Expect = 4.3e-16, Sum P(4) = 4.3e-16
Identities = 54/217 (24%), Positives = 101/217 (46%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLN 368
Y KLAR +F + NQ F++ + NK A +++ +L G W +SS+
Sbjct: 489 YVNKLAR--MFQDIKVSEDLNQA-FKEMHKNNKLALPADSVNIKILNAGAWS--RSSE-- 541
Query: 369 PIF-NLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAA 427
+F +LP+++ + + FY+ RKL W + + I K E+ +L ++T+ A
Sbjct: 542 KVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLA 601
Query: 428 ILDLFNASNR--LSYSQVITQLNLTHDDLVRLLHSLSI---LYYKILIKEPDT---KSIS 479
+L +N R +S+ + L +L R L SL L ++L+ EP K +
Sbjct: 602 VLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKDFT 661
Query: 480 RSDYFELNSKFTDRMRGSRSLSHHR-KVLGHQQLVSE 515
F +N +F+ ++ ++ + ++G QL +E
Sbjct: 662 EGTLFSVNQEFS-LIKNAKVQKRGKINLIGRLQLTTE 697
Score = 101 (40.6 bits), Expect = 3.8e-12, Sum P(4) = 3.8e-12
Identities = 39/139 (28%), Positives = 61/139 (43%)
Query: 235 DHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSG-NEKLSDEAIXXXXXXXX 293
D ++F+ L K KT E LA +CD +L+K+ ++KL+ E I
Sbjct: 379 DATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVL 438
Query: 294 XXXXYISDKDLFAEFYRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLS-VT 352
Y+ +KD+F +++ L RRL+ D S + + ++LR G+ V
Sbjct: 439 LVLKYVQNKDVFMRYHKAHLTRRLILDISAD--SEIEENMVEWLR-----EVGMPADYVN 491
Query: 353 VLATGFWPSYKSSDLNPIF 371
LA F S DLN F
Sbjct: 492 KLARMFQDIKVSEDLNQAF 510
Score = 97 (39.2 bits), Expect = 4.3e-16, Sum P(4) = 4.3e-16
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK + + QL +E +E+L MF P K K++IE LI Y+ R + NTF
Sbjct: 726 RKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTF 776
Score = 95 (38.5 bits), Expect = 4.3e-16, Sum P(4) = 4.3e-16
Identities = 24/98 (24%), Positives = 46/98 (46%)
Query: 114 DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVE 173
D F + L T +Y + +++ ++ +YM+ A+ LK+E R RYL++ E VE
Sbjct: 200 DNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVE 259
Query: 174 KVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMY 211
+ + T E + C + + N+ + L M+
Sbjct: 260 ALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMF 297
Score = 43 (20.2 bits), Expect = 6.7e-11, Sum P(4) = 6.7e-11
Identities = 24/86 (27%), Positives = 35/86 (40%)
Query: 212 RFYRT-----IRAGPHDNYMEYVTNCFMDHSLFQRALK-----------EAFKIFC-NKT 254
RFYRT ++ NYM+Y + +RAL+ EA C N
Sbjct: 212 RFYRTQAPSYLQQNGVQNYMKYADAKLKEEE--KRALRYLETRRECNSVEALMECCVNAL 269
Query: 255 VGGFSSSEQLATFCDNILKKSGNEKL 280
V F E + C ++K++ EKL
Sbjct: 270 VTSFK--ETILAECQGMIKRNETEKL 293
Score = 40 (19.1 bits), Expect = 4.3e-16, Sum P(4) = 4.3e-16
Identities = 8/45 (17%), Positives = 25/45 (55%)
Query: 7 IEFDEGWEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMC 51
++F++ W++++ + KL LR+ + +++ L ++ +C
Sbjct: 13 LQFEDKWDFMRPIVLKL------LRQESVTKQQWFDLFSDVHAVC 51
>UNIPROTKB|F1P0F9 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031466 "Cul5-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031466 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 EMBL:AADN02005055 IPI:IPI00593656
Ensembl:ENSGALT00000027725 Uniprot:F1P0F9
Length = 776
Score = 137 (53.3 bits), Expect = 6.7e-16, Sum P(4) = 6.7e-16
Identities = 54/217 (24%), Positives = 101/217 (46%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLN 368
Y KLAR +F + NQ F++ + NK A +++ +L G W +SS+
Sbjct: 485 YVNKLAR--MFQDIKVSEDLNQA-FKEMHKNNKLALPADSVNIKILNAGAWS--RSSE-- 537
Query: 369 PIF-NLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAA 427
+F +LP+++ + + FY+ RKL W + + I K E+ +L ++T+ A
Sbjct: 538 KVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLA 597
Query: 428 ILDLFNASNR--LSYSQVITQLNLTHDDLVRLLHSLSI---LYYKILIKEPDT---KSIS 479
+L +N R +S+ + L +L R L SL L ++L+ EP K +
Sbjct: 598 VLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKDFT 657
Query: 480 RSDYFELNSKFTDRMRGSRSLSHHR-KVLGHQQLVSE 515
F +N +F+ ++ ++ + ++G QL +E
Sbjct: 658 EGTLFSVNQEFS-LIKNAKVQKRGKINLIGRLQLTTE 693
Score = 101 (40.6 bits), Expect = 5.8e-12, Sum P(4) = 5.8e-12
Identities = 39/139 (28%), Positives = 61/139 (43%)
Query: 235 DHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSG-NEKLSDEAIXXXXXXXX 293
D ++F+ L K KT E LA +CD +L+K+ ++KL+ E I
Sbjct: 375 DATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVL 434
Query: 294 XXXXYISDKDLFAEFYRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLS-VT 352
Y+ +KD+F +++ L RRL+ D S + + ++LR G+ V
Sbjct: 435 LVLKYVQNKDVFMRYHKAHLTRRLILDISAD--SEIEENMVEWLR-----EVGMPADYVN 487
Query: 353 VLATGFWPSYKSSDLNPIF 371
LA F S DLN F
Sbjct: 488 KLARMFQDIKVSEDLNQAF 506
Score = 95 (38.5 bits), Expect = 6.7e-16, Sum P(4) = 6.7e-16
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK + + QL +E +E+L MF P K K++IE LI Y+ R + NTF
Sbjct: 722 RKKITNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTF 772
Score = 95 (38.5 bits), Expect = 6.7e-16, Sum P(4) = 6.7e-16
Identities = 24/98 (24%), Positives = 46/98 (46%)
Query: 114 DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVE 173
D F + L T +Y + +++ ++ +YM+ A+ LK+E R RYL++ E VE
Sbjct: 196 DNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVE 255
Query: 174 KVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMY 211
+ + T E + C + + N+ + L M+
Sbjct: 256 ALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMF 293
Score = 43 (20.2 bits), Expect = 1.0e-10, Sum P(4) = 1.0e-10
Identities = 24/86 (27%), Positives = 35/86 (40%)
Query: 212 RFYRT-----IRAGPHDNYMEYVTNCFMDHSLFQRALK-----------EAFKIFC-NKT 254
RFYRT ++ NYM+Y + +RAL+ EA C N
Sbjct: 208 RFYRTQAPSYLQQNGVQNYMKYADAKLKEEE--KRALRYLETRRECNSVEALMECCVNAL 265
Query: 255 VGGFSSSEQLATFCDNILKKSGNEKL 280
V F E + C ++K++ EKL
Sbjct: 266 VTSFK--ETILAECQGMIKRNETEKL 289
Score = 40 (19.1 bits), Expect = 6.7e-16, Sum P(4) = 6.7e-16
Identities = 8/45 (17%), Positives = 25/45 (55%)
Query: 7 IEFDEGWEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMC 51
++F++ W++++ + KL LR+ + +++ L ++ +C
Sbjct: 9 LQFEDKWDFMRPIVLKL------LRQESVTKQQWFDLFSDVHAVC 47
>RGD|621742 [details] [associations]
symbol:Cul5 "cullin 5" species:10116 "Rattus norvegicus"
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=TAS] [GO:0005000
"vasopressin receptor activity" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0006970 "response to
osmotic stress" evidence=IEP] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031466 "Cul5-RING ubiquitin
ligase complex" evidence=ISO;TAS] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA;ISO] [GO:0051480 "cytosolic calcium
ion homeostasis" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 RGD:621742
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006970 GO:GO:0006511 GO:GO:0051480
GO:GO:0004842 GO:GO:0000209 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0005000 GO:GO:0031466 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 HOGENOM:HOG000007610 KO:K10612
OMA:EVTTFQM CTD:8065 HOVERGEN:HBG099672 OrthoDB:EOG46Q6RZ
EMBL:AF135115 IPI:IPI00325517 RefSeq:NP_073174.1 UniGene:Rn.163001
ProteinModelPortal:Q9JJ31 STRING:Q9JJ31 PhosphoSite:Q9JJ31
PRIDE:Q9JJ31 Ensembl:ENSRNOT00000010956 GeneID:64624 KEGG:rno:64624
UCSC:RGD:621742 InParanoid:Q9JJ31 NextBio:613566
ArrayExpress:Q9JJ31 Genevestigator:Q9JJ31
GermOnline:ENSRNOG00000008039 Uniprot:Q9JJ31
Length = 780
Score = 132 (51.5 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 53/217 (24%), Positives = 100/217 (46%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLN 368
Y KLAR +F + NQ F++ + NK A +++ +L G W +SS+
Sbjct: 489 YVNKLAR--MFQDIKVSEDLNQA-FKEMHKNNKLALPADSVNIKILNAGAWS--RSSE-- 541
Query: 369 PIF-NLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAA 427
+F +LP+++ + + FY+ RKL W + + I K E+ +L ++T+ A
Sbjct: 542 KVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLA 601
Query: 428 ILDLFNASNR--LSYSQVITQLNLTHDDLVRLLHSLSI---LYYKILIKEPDT---KSIS 479
+L +N R +S+ + L +L R L SL L ++L+ +P K +
Sbjct: 602 VLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYDPQVNSPKDFT 661
Query: 480 RSDYFELNSKFTDRMRGSRSLSHHR-KVLGHQQLVSE 515
F +N F+ ++ ++ + ++G QL +E
Sbjct: 662 EGTLFSVNQDFS-LIKNAKVQKRGKINLIGRLQLTTE 697
Score = 101 (40.6 bits), Expect = 3.0e-12, Sum P(4) = 3.0e-12
Identities = 39/139 (28%), Positives = 61/139 (43%)
Query: 235 DHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSG-NEKLSDEAIXXXXXXXX 293
D ++F+ L K KT E LA +CD +L+K+ ++KL+ E I
Sbjct: 379 DATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVL 438
Query: 294 XXXXYISDKDLFAEFYRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLS-VT 352
Y+ +KD+F +++ L RRL+ D S + + ++LR G+ V
Sbjct: 439 LVLKYVQNKDVFMRYHKAHLTRRLILDISAD--SEIEENMVEWLR-----EVGMPADYVN 491
Query: 353 VLATGFWPSYKSSDLNPIF 371
LA F S DLN F
Sbjct: 492 KLARMFQDIKVSEDLNQAF 510
Score = 97 (39.2 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 25/107 (23%), Positives = 48/107 (44%)
Query: 114 DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVE 173
D F + L T +Y + +++ ++ +YM+ A+ LK+E R RYL++ E VE
Sbjct: 200 DNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVE 259
Query: 174 KVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG 220
+ + T E + C + + N+ + L M+ + G
Sbjct: 260 ALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPGG 306
Score = 96 (38.9 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK + + QL +E +E+L MF P K K++IE LI Y+ R + NTF
Sbjct: 726 RKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDEADINTF 776
Score = 43 (20.2 bits), Expect = 2.9e-10, Sum P(4) = 2.9e-10
Identities = 24/86 (27%), Positives = 35/86 (40%)
Query: 212 RFYRT-----IRAGPHDNYMEYVTNCFMDHSLFQRALK-----------EAFKIFC-NKT 254
RFYRT ++ NYM+Y + +RAL+ EA C N
Sbjct: 212 RFYRTQAPSYLQQNGVQNYMKYADAKLKEEE--KRALRYLETRRECNSVEALMECCVNAL 269
Query: 255 VGGFSSSEQLATFCDNILKKSGNEKL 280
V F E + C ++K++ EKL
Sbjct: 270 VTSFK--ETILAECQGMIKRNETEKL 293
Score = 40 (19.1 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 8/45 (17%), Positives = 25/45 (55%)
Query: 7 IEFDEGWEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMC 51
++F++ W++++ + KL LR+ + +++ L ++ +C
Sbjct: 13 LQFEDKWDFMRPIVLKL------LRQESVTKQQWFDLFSDVHAVC 51
>UNIPROTKB|Q9JJ31 [details] [associations]
symbol:Cul5 "Cullin-5" species:10116 "Rattus norvegicus"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 RGD:621742 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006970
GO:GO:0006511 GO:GO:0051480 GO:GO:0004842 GO:GO:0000209
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0005000 GO:GO:0031466
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000007610 KO:K10612 OMA:EVTTFQM CTD:8065
HOVERGEN:HBG099672 OrthoDB:EOG46Q6RZ EMBL:AF135115 IPI:IPI00325517
RefSeq:NP_073174.1 UniGene:Rn.163001 ProteinModelPortal:Q9JJ31
STRING:Q9JJ31 PhosphoSite:Q9JJ31 PRIDE:Q9JJ31
Ensembl:ENSRNOT00000010956 GeneID:64624 KEGG:rno:64624
UCSC:RGD:621742 InParanoid:Q9JJ31 NextBio:613566
ArrayExpress:Q9JJ31 Genevestigator:Q9JJ31
GermOnline:ENSRNOG00000008039 Uniprot:Q9JJ31
Length = 780
Score = 132 (51.5 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 53/217 (24%), Positives = 100/217 (46%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLN 368
Y KLAR +F + NQ F++ + NK A +++ +L G W +SS+
Sbjct: 489 YVNKLAR--MFQDIKVSEDLNQA-FKEMHKNNKLALPADSVNIKILNAGAWS--RSSE-- 541
Query: 369 PIF-NLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAA 427
+F +LP+++ + + FY+ RKL W + + I K E+ +L ++T+ A
Sbjct: 542 KVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLA 601
Query: 428 ILDLFNASNR--LSYSQVITQLNLTHDDLVRLLHSLSI---LYYKILIKEPDT---KSIS 479
+L +N R +S+ + L +L R L SL L ++L+ +P K +
Sbjct: 602 VLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYDPQVNSPKDFT 661
Query: 480 RSDYFELNSKFTDRMRGSRSLSHHR-KVLGHQQLVSE 515
F +N F+ ++ ++ + ++G QL +E
Sbjct: 662 EGTLFSVNQDFS-LIKNAKVQKRGKINLIGRLQLTTE 697
Score = 101 (40.6 bits), Expect = 3.0e-12, Sum P(4) = 3.0e-12
Identities = 39/139 (28%), Positives = 61/139 (43%)
Query: 235 DHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSG-NEKLSDEAIXXXXXXXX 293
D ++F+ L K KT E LA +CD +L+K+ ++KL+ E I
Sbjct: 379 DATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVL 438
Query: 294 XXXXYISDKDLFAEFYRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLS-VT 352
Y+ +KD+F +++ L RRL+ D S + + ++LR G+ V
Sbjct: 439 LVLKYVQNKDVFMRYHKAHLTRRLILDISAD--SEIEENMVEWLR-----EVGMPADYVN 491
Query: 353 VLATGFWPSYKSSDLNPIF 371
LA F S DLN F
Sbjct: 492 KLARMFQDIKVSEDLNQAF 510
Score = 97 (39.2 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 25/107 (23%), Positives = 48/107 (44%)
Query: 114 DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVE 173
D F + L T +Y + +++ ++ +YM+ A+ LK+E R RYL++ E VE
Sbjct: 200 DNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVE 259
Query: 174 KVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG 220
+ + T E + C + + N+ + L M+ + G
Sbjct: 260 ALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPGG 306
Score = 96 (38.9 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK + + QL +E +E+L MF P K K++IE LI Y+ R + NTF
Sbjct: 726 RKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDEADINTF 776
Score = 43 (20.2 bits), Expect = 2.9e-10, Sum P(4) = 2.9e-10
Identities = 24/86 (27%), Positives = 35/86 (40%)
Query: 212 RFYRT-----IRAGPHDNYMEYVTNCFMDHSLFQRALK-----------EAFKIFC-NKT 254
RFYRT ++ NYM+Y + +RAL+ EA C N
Sbjct: 212 RFYRTQAPSYLQQNGVQNYMKYADAKLKEEE--KRALRYLETRRECNSVEALMECCVNAL 269
Query: 255 VGGFSSSEQLATFCDNILKKSGNEKL 280
V F E + C ++K++ EKL
Sbjct: 270 VTSFK--ETILAECQGMIKRNETEKL 293
Score = 40 (19.1 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 8/45 (17%), Positives = 25/45 (55%)
Query: 7 IEFDEGWEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMC 51
++F++ W++++ + KL LR+ + +++ L ++ +C
Sbjct: 13 LQFEDKWDFMRPIVLKL------LRQESVTKQQWFDLFSDVHAVC 51
>FB|FBgn0039632 [details] [associations]
symbol:Cul-5 "Cullin-5" species:7227 "Drosophila
melanogaster" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0016360 "sensory organ precursor cell
fate determination" evidence=IMP] [GO:0007528 "neuromuscular
junction development" evidence=IMP] [GO:0007293 "germarium-derived
egg chamber formation" evidence=IMP] [GO:0008285 "negative
regulation of cell proliferation" evidence=IMP] [GO:0007295 "growth
of a germarium-derived egg chamber" evidence=IMP] [GO:0008582
"regulation of synaptic growth at neuromuscular junction"
evidence=IMP] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:AE014297 GO:GO:0008285 GO:GO:0007528 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 GO:GO:0016360 SUPFAM:SSF75632
GO:GO:0031461 GO:GO:0008582 GO:GO:0007293 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0007295
HSSP:Q9JLV5 CTD:43434 KO:K10612 OMA:EVTTFQM FlyBase:FBgn0039632
EMBL:BT133427 RefSeq:NP_651665.2 UniGene:Dm.5893 SMR:Q9VAQ0
IntAct:Q9VAQ0 MINT:MINT-906434 STRING:Q9VAQ0
EnsemblMetazoa:FBtr0085417 GeneID:43434 KEGG:dme:Dmel_CG1401
UCSC:CG1401-RA InParanoid:Q9VAQ0 GenomeRNAi:43434 NextBio:833902
Uniprot:Q9VAQ0
Length = 852
Score = 111 (44.1 bits), Expect = 5.4e-15, Sum P(5) = 5.4e-15
Identities = 40/176 (22%), Positives = 76/176 (43%)
Query: 349 LSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHI 408
+++ +L G W + S+ + +LP ++ + + FY+ K RKL W + + I
Sbjct: 597 INIKILNAGAWA--RCSERVSV-SLPIELEDYIPDVEEFYKKKHSGRKLQWYHHMSNGTI 653
Query: 409 NAKFELKNIELIISTYHAAILDLFNAS--NRLSYSQVITQLNLTHDDLVRLLHSLSI--- 463
+L ++T+ A+L +N +++SY + L +L R L SL
Sbjct: 654 TFVNNFGRYDLDVTTFQMAVLFAWNQRQHDKISYENLRLATELPDPELRRTLWSLVAFPK 713
Query: 464 LYYKILIKEP----DTKSISRSDYFELNSKFTDRMRGSRSLSHHRKVLGHQQLVSE 515
+ +IL+ EP K + + F +N +F G ++G QL +E
Sbjct: 714 IKKQILLMEPAAISSPKDFAENTMFYINQEFAIVKNGKSQRRGKLNLIGRLQLSTE 769
Score = 89 (36.4 bits), Expect = 5.4e-15, Sum P(5) = 5.4e-15
Identities = 32/112 (28%), Positives = 53/112 (47%)
Query: 262 EQLATFCDNILKKSG-NEKLSDEAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFD 320
E LA +CD +L+++ +++L+ E I Y+++KD+F +++ L RRL+
Sbjct: 483 ELLANYCDMLLRRTPLSKRLTSEQIDARLRDVLLVLKYVNNKDVFMRYHKVHLTRRLILG 542
Query: 321 RSRTLARKNQTGFEKYLRYNKNAHAGIDLS-VTVLATGFWPSYKSSDLNPIF 371
S + K + E +LR G+ V LA F S DLN F
Sbjct: 543 TSAD-SEKEEDIVE-WLR-----EVGMPADYVNRLARMFQDIKVSEDLNTQF 587
Score = 83 (34.3 bits), Expect = 5.4e-15, Sum P(5) = 5.4e-15
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK + + L E I++L MF P+ K K+++E LI Y+ R ++ N F
Sbjct: 798 RKRMNNAALQGELIDILKNMFLPSKKMIKEQLEWLIENKYMRRDDDDINMF 848
Score = 75 (31.5 bits), Expect = 5.4e-15, Sum P(5) = 5.4e-15
Identities = 27/112 (24%), Positives = 52/112 (46%)
Query: 113 LDIFVEHM----LQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGE 168
L+I+ E+ L+ T +Y S ++ YM+ A+ L++E R RYL+ +
Sbjct: 273 LEIYRENFEMAYLKATVEFYRLKSAEQQQENGVLAYMKYADSKLREEEVRAKRYLEPSSF 332
Query: 169 EKLVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG 220
L + + L+V + ++ + C AL R + + L+ M+R + G
Sbjct: 333 SILTYTLVNVLIVDHLNSIIAE----CPALIRDYETERLNLMFRLMDRVMHG 380
Score = 42 (19.8 bits), Expect = 5.4e-15, Sum P(5) = 5.4e-15
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 223 DNYMEYVTNCFMDHSLFQRALKEAFKIFCNKT 254
+ + + V N F D F A AFK N T
Sbjct: 425 NKFSDLVRNAFNDDPRFLTARDIAFKTVVNDT 456
Score = 39 (18.8 bits), Expect = 1.8e-11, Sum P(5) = 1.8e-11
Identities = 15/58 (25%), Positives = 24/58 (41%)
Query: 71 FDEFGLACFRDLVYDALKHKAKDAVIDEREREQVDRALLANVLDIFVEHMLQDTSSYY 128
+DE G A +YD L+ + ++ + + Q R A + VE T S Y
Sbjct: 51 WDEKGAA----KIYDCLQQDIVEFIVQAQSQVQAQRGEQALLATYIVEWRKFFTQSNY 104
>MGI|MGI:1922967 [details] [associations]
symbol:Cul5 "cullin 5" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0031461 "cullin-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031466 "Cul5-RING
ubiquitin ligase complex" evidence=ISO] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] [GO:0051480 "cytosolic
calcium ion homeostasis" evidence=ISO] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 MGI:MGI:1922967
GO:GO:0005634 GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0006970 GO:GO:0006511 GO:GO:0051480
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031466 InterPro:IPR016159
SUPFAM:SSF74788 HOGENOM:HOG000007610 KO:K10612 CTD:8065
HOVERGEN:HBG099672 OrthoDB:EOG46Q6RZ EMBL:AK014894 EMBL:AK030306
EMBL:AK031955 EMBL:AK046030 EMBL:AK080305 EMBL:BC075710
IPI:IPI00988369 RefSeq:NP_001155090.1 RefSeq:NP_082083.2
UniGene:Mm.218910 UniGene:Mm.482399 PDB:2WZK PDBsum:2WZK
ProteinModelPortal:Q9D5V5 SMR:Q9D5V5 IntAct:Q9D5V5 STRING:Q9D5V5
PhosphoSite:Q9D5V5 PaxDb:Q9D5V5 PRIDE:Q9D5V5 GeneID:75717
KEGG:mmu:75717 InParanoid:Q9D5V5 EvolutionaryTrace:Q9D5V5
NextBio:343766 Bgee:Q9D5V5 CleanEx:MM_CUL5 Genevestigator:Q9D5V5
GermOnline:ENSMUSG00000032030 Uniprot:Q9D5V5
Length = 780
Score = 132 (51.5 bits), Expect = 6.2e-15, Sum P(4) = 6.2e-15
Identities = 53/217 (24%), Positives = 100/217 (46%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLN 368
Y KLAR +F + NQ F++ + NK A +++ +L G W +SS+
Sbjct: 489 YVNKLAR--MFQDIKVSEDLNQA-FKEMHKNNKLALPADSVNIKILNAGAWS--RSSE-- 541
Query: 369 PIF-NLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAA 427
+F +LP+++ + + FY+ RKL W + + I K E+ +L ++T+ A
Sbjct: 542 KVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLA 601
Query: 428 ILDLFNASNR--LSYSQVITQLNLTHDDLVRLLHSLSI---LYYKILIKEPDT---KSIS 479
+L +N R +S+ + L +L R L SL L ++L+ +P K +
Sbjct: 602 VLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYDPQVNSPKDFT 661
Query: 480 RSDYFELNSKFTDRMRGSRSLSHHR-KVLGHQQLVSE 515
F +N F+ ++ ++ + ++G QL +E
Sbjct: 662 EGTLFSVNQDFS-LIKNAKVQKRGKINLIGRLQLTTE 697
Score = 101 (40.6 bits), Expect = 1.5e-11, Sum P(4) = 1.5e-11
Identities = 39/139 (28%), Positives = 61/139 (43%)
Query: 235 DHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSG-NEKLSDEAIXXXXXXXX 293
D ++F+ L K KT E LA +CD +L+K+ ++KL+ E I
Sbjct: 379 DATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVL 438
Query: 294 XXXXYISDKDLFAEFYRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLS-VT 352
Y+ +KD+F +++ L RRL+ D S + + ++LR G+ V
Sbjct: 439 LVLKYVQNKDVFMRYHKAHLTRRLILDISAD--SEIEENMVEWLR-----EVGMPADYVN 491
Query: 353 VLATGFWPSYKSSDLNPIF 371
LA F S DLN F
Sbjct: 492 KLARMFQDIKVSEDLNQAF 510
Score = 95 (38.5 bits), Expect = 6.2e-15, Sum P(4) = 6.2e-15
Identities = 24/98 (24%), Positives = 46/98 (46%)
Query: 114 DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVE 173
D F + L T +Y + +++ ++ +YM+ A+ LK+E R RYL++ E VE
Sbjct: 200 DNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVE 259
Query: 174 KVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMY 211
+ + T E + C + + N+ + L M+
Sbjct: 260 ALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMF 297
Score = 92 (37.4 bits), Expect = 6.2e-15, Sum P(4) = 6.2e-15
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RK + + QL +E +E+L MF P K K+++E LI Y+ R + NTF
Sbjct: 726 RKKISNAQLQTELVEILKNMFLPQKKMIKEQMEWLIEHRYIRRDEADINTF 776
Score = 43 (20.2 bits), Expect = 9.1e-10, Sum P(4) = 9.1e-10
Identities = 24/86 (27%), Positives = 35/86 (40%)
Query: 212 RFYRT-----IRAGPHDNYMEYVTNCFMDHSLFQRALK-----------EAFKIFC-NKT 254
RFYRT ++ NYM+Y + +RAL+ EA C N
Sbjct: 212 RFYRTQAPSYLQQNGVQNYMKYADAKLKEEE--KRALRYLETRRECNSVEALMECCVNAL 269
Query: 255 VGGFSSSEQLATFCDNILKKSGNEKL 280
V F E + C ++K++ EKL
Sbjct: 270 VTSFK--ETILAECQGMIKRNETEKL 293
Score = 39 (18.8 bits), Expect = 6.2e-15, Sum P(4) = 6.2e-15
Identities = 8/45 (17%), Positives = 24/45 (53%)
Query: 7 IEFDEGWEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMC 51
++F++ W+++ + KL LR+ + +++ L ++ +C
Sbjct: 13 LQFEDKWDFMHPIVLKL------LRQESVTKQQWFDLFSDVHAVC 51
>CGD|CAL0000107 [details] [associations]
symbol:CDC53 species:5476 "Candida albicans" [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA;ISA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISA;IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISA;IMP] [GO:0006521 "regulation of cellular
amino acid metabolic process" evidence=IMP] [GO:0010570 "regulation
of filamentous growth" evidence=IMP] [GO:0005829 "cytosol"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0000086 "G2/M transition of
mitotic cell cycle" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070783 "growth of unicellular organism
as a thread of attached cells" evidence=IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0003688 "DNA replication
origin binding" evidence=IEA] [GO:0030674 "protein binding,
bridging" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 CGD:CAL0000107 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 GO:GO:0019005 EMBL:AACQ01000014
EMBL:AACQ01000013 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0010570
GO:GO:0006521 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0031146
GO:GO:0070783 KO:K03347 RefSeq:XP_721632.1 RefSeq:XP_721751.1
ProteinModelPortal:Q5AJB7 STRING:Q5AJB7 GeneID:3636603
GeneID:3636750 KEGG:cal:CaO19.1674 KEGG:cal:CaO19.9243
Uniprot:Q5AJB7
Length = 752
Score = 112 (44.5 bits), Expect = 6.4e-15, Sum P(5) = 6.4e-15
Identities = 31/142 (21%), Positives = 62/142 (43%)
Query: 337 LRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHRK 396
+++ + D S VLA WP + S D N + L ++ ++ FK Y + K ++
Sbjct: 508 IKFKDGMNVLFDFSPMVLARSTWPFHSSQDYNDL-KLAPELKVTIDSFKAMYLQQGKGKQ 566
Query: 397 LSWIYSLGQCHINAKFEL----KNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHD 452
+ W+++ G+ + A K I+S +L +N S + ++ + + +
Sbjct: 567 IEWLWNHGRAELKAHLTKGKGGKPFNFIVSQIQLMVLLAYNYSKTYTLDDLVKIVGIKKE 626
Query: 453 DLVRLLHSLSILYYKILIKEPD 474
L H + YK+L +E D
Sbjct: 627 LLQN--HVTPFVKYKLLKEEGD 646
Score = 106 (42.4 bits), Expect = 6.4e-15, Sum P(5) = 6.4e-15
Identities = 32/137 (23%), Positives = 67/137 (48%)
Query: 96 IDEREREQVDRALLANVLDIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKE 155
ID ++ ++ + + N +I L+ T YY++ S ++ DYM+K E + +E
Sbjct: 200 IDIQDLKKPNLIIYVNSFEI---PFLEATMEYYAKESAAFLASHNVIDYMKKCETRIGEE 256
Query: 156 RDRVSRYLQSNGEEKLVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYR 215
R + YL+ ++ L+E + L+ +A ++ ++ L N++D + RMY+
Sbjct: 257 VSRSNNYLEERTKKPLLEVLNAALIEKHANEMYDQFL----VLLEQNQIDHIQRMYKLLA 312
Query: 216 TIRA--GPHDNYME-YV 229
++ P N +E Y+
Sbjct: 313 RVQKTLDPLANTLELYI 329
Score = 71 (30.1 bits), Expect = 6.4e-15, Sum P(5) = 6.4e-15
Identities = 28/112 (25%), Positives = 50/112 (44%)
Query: 222 HDNYMEYVTNCFMDHSLFQRALKEAFKIFCN-------KTVGGFSSSEQLATFCDNILKK 274
++ + + V F + F ++L A + F N K + E LA + D LK
Sbjct: 367 YNRFNDIVVRAFSKDTKFIKSLDNACRHFVNNNPIATPKPRSPCRTPELLARYADGFLKS 426
Query: 275 SG--NEKLSDEAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRSRT 324
+ NE +D + +I+++D F E YR+ LA+RL+ S++
Sbjct: 427 NSKDNEMNADNLMIVFK--------FIAERDSFEEHYRRLLAKRLVNGTSKS 470
Score = 55 (24.4 bits), Expect = 6.4e-15, Sum P(5) = 6.4e-15
Identities = 19/77 (24%), Positives = 35/77 (45%)
Query: 471 KEPDTKSISRSDYFELNSKFTDRMRGSR-SLSHHRKVLGHQQLVSECIELLGRMFKPAVK 529
KE D + I++ E+ T + S + +K + L++E + G F
Sbjct: 671 KEEDVEEITK----EVQQSRTIFLEASIVRIMKSKKSMAPNNLLNEVVVQAGNRFNAKNI 726
Query: 530 AFKKRIEGLISQDYLER 546
K+ I+ LI ++YL+R
Sbjct: 727 DVKRAIDSLIDKEYLKR 743
Score = 52 (23.4 bits), Expect = 6.4e-15, Sum P(5) = 6.4e-15
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 13 WEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMC 51
W +IQ G L+ IL E ++ YM + +YN C
Sbjct: 15 WTFIQPG---LEYILGAHGEQGVTATVYMNCYTAVYNYC 50
>UNIPROTKB|Q5AJB7 [details] [associations]
symbol:CDC53 "Putative uncharacterized protein CDC53"
species:237561 "Candida albicans SC5314" [GO:0006521 "regulation of
cellular amino acid metabolic process" evidence=IMP] [GO:0010570
"regulation of filamentous growth" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=ISA;IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=ISA] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISA;IMP]
[GO:0070783 "growth of unicellular organism as a thread of attached
cells" evidence=IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISA;IMP] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 CGD:CAL0000107 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 GO:GO:0019005 EMBL:AACQ01000014
EMBL:AACQ01000013 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0010570
GO:GO:0006521 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0031146
GO:GO:0070783 KO:K03347 RefSeq:XP_721632.1 RefSeq:XP_721751.1
ProteinModelPortal:Q5AJB7 STRING:Q5AJB7 GeneID:3636603
GeneID:3636750 KEGG:cal:CaO19.1674 KEGG:cal:CaO19.9243
Uniprot:Q5AJB7
Length = 752
Score = 112 (44.5 bits), Expect = 6.4e-15, Sum P(5) = 6.4e-15
Identities = 31/142 (21%), Positives = 62/142 (43%)
Query: 337 LRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHRK 396
+++ + D S VLA WP + S D N + L ++ ++ FK Y + K ++
Sbjct: 508 IKFKDGMNVLFDFSPMVLARSTWPFHSSQDYNDL-KLAPELKVTIDSFKAMYLQQGKGKQ 566
Query: 397 LSWIYSLGQCHINAKFEL----KNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHD 452
+ W+++ G+ + A K I+S +L +N S + ++ + + +
Sbjct: 567 IEWLWNHGRAELKAHLTKGKGGKPFNFIVSQIQLMVLLAYNYSKTYTLDDLVKIVGIKKE 626
Query: 453 DLVRLLHSLSILYYKILIKEPD 474
L H + YK+L +E D
Sbjct: 627 LLQN--HVTPFVKYKLLKEEGD 646
Score = 106 (42.4 bits), Expect = 6.4e-15, Sum P(5) = 6.4e-15
Identities = 32/137 (23%), Positives = 67/137 (48%)
Query: 96 IDEREREQVDRALLANVLDIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKE 155
ID ++ ++ + + N +I L+ T YY++ S ++ DYM+K E + +E
Sbjct: 200 IDIQDLKKPNLIIYVNSFEI---PFLEATMEYYAKESAAFLASHNVIDYMKKCETRIGEE 256
Query: 156 RDRVSRYLQSNGEEKLVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYR 215
R + YL+ ++ L+E + L+ +A ++ ++ L N++D + RMY+
Sbjct: 257 VSRSNNYLEERTKKPLLEVLNAALIEKHANEMYDQFL----VLLEQNQIDHIQRMYKLLA 312
Query: 216 TIRA--GPHDNYME-YV 229
++ P N +E Y+
Sbjct: 313 RVQKTLDPLANTLELYI 329
Score = 71 (30.1 bits), Expect = 6.4e-15, Sum P(5) = 6.4e-15
Identities = 28/112 (25%), Positives = 50/112 (44%)
Query: 222 HDNYMEYVTNCFMDHSLFQRALKEAFKIFCN-------KTVGGFSSSEQLATFCDNILKK 274
++ + + V F + F ++L A + F N K + E LA + D LK
Sbjct: 367 YNRFNDIVVRAFSKDTKFIKSLDNACRHFVNNNPIATPKPRSPCRTPELLARYADGFLKS 426
Query: 275 SG--NEKLSDEAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRSRT 324
+ NE +D + +I+++D F E YR+ LA+RL+ S++
Sbjct: 427 NSKDNEMNADNLMIVFK--------FIAERDSFEEHYRRLLAKRLVNGTSKS 470
Score = 55 (24.4 bits), Expect = 6.4e-15, Sum P(5) = 6.4e-15
Identities = 19/77 (24%), Positives = 35/77 (45%)
Query: 471 KEPDTKSISRSDYFELNSKFTDRMRGSR-SLSHHRKVLGHQQLVSECIELLGRMFKPAVK 529
KE D + I++ E+ T + S + +K + L++E + G F
Sbjct: 671 KEEDVEEITK----EVQQSRTIFLEASIVRIMKSKKSMAPNNLLNEVVVQAGNRFNAKNI 726
Query: 530 AFKKRIEGLISQDYLER 546
K+ I+ LI ++YL+R
Sbjct: 727 DVKRAIDSLIDKEYLKR 743
Score = 52 (23.4 bits), Expect = 6.4e-15, Sum P(5) = 6.4e-15
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 13 WEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMC 51
W +IQ G L+ IL E ++ YM + +YN C
Sbjct: 15 WTFIQPG---LEYILGAHGEQGVTATVYMNCYTAVYNYC 50
>SGD|S000002290 [details] [associations]
symbol:CDC53 "Cullin" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA;IPI] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=IGI]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0030674 "protein binding, bridging" evidence=IMP;IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0003688 "DNA replication origin binding" evidence=IPI]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 SGD:S000002290
GO:GO:0005634 GO:GO:0005737 GO:GO:0000086 GO:GO:0051301
GO:GO:0000082 EMBL:BK006938 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0030674 GO:GO:0003688 GO:GO:0019005 eggNOG:COG5647
SUPFAM:SSF75632 EMBL:X96876 GO:GO:0042787 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0031146 EMBL:U43564 EMBL:Z74180 PIR:S67675
RefSeq:NP_010150.1 PDB:3O2P PDB:3O6B PDBsum:3O2P PDBsum:3O6B
ProteinModelPortal:Q12018 SMR:Q12018 DIP:DIP-1234N IntAct:Q12018
MINT:MINT-384023 STRING:Q12018 PaxDb:Q12018 PeptideAtlas:Q12018
EnsemblFungi:YDL132W GeneID:851424 KEGG:sce:YDL132W CYGD:YDL132w
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713 KO:K03347
OMA:SGVINCY OrthoDB:EOG4W3WW4 EvolutionaryTrace:Q12018
NextBio:968633 Genevestigator:Q12018 GermOnline:YDL132W
Uniprot:Q12018
Length = 815
Score = 95 (38.5 bits), Expect = 7.2e-13, Sum P(5) = 7.2e-13
Identities = 31/130 (23%), Positives = 57/130 (43%)
Query: 348 DLSVTVLATGFWP-SYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQC 406
DL VLA WP SY+ + F LP +++ E K Y K R L W++ L +
Sbjct: 553 DLQPFVLAENMWPFSYQEVE----FKLPKELVPSHEKLKESYSQKHNGRILKWLWPLCRG 608
Query: 407 HINAKFELKN---IELIISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSI 463
+ A ++ + AIL L+N ++ L+ + +LT + + +
Sbjct: 609 ELKADIGKPGRMPFNFTVTLFQMAILLLYNDADVLTLENIQEGTSLTIQHIAAAM--VPF 666
Query: 464 LYYKILIKEP 473
+ +K++ + P
Sbjct: 667 IKFKLIQQVP 676
Score = 85 (35.0 bits), Expect = 7.2e-13, Sum P(5) = 7.2e-13
Identities = 23/111 (20%), Positives = 56/111 (50%)
Query: 106 RALLANV-LDIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQ 164
+ L NV + +F + L+ T YY++ + +++ K +Y+ +A E +K+E ++ Y
Sbjct: 213 KKLNLNVYIQVFEKPFLKKTQEYYTQYTNDYLEKHSVTEYIFEAHEIIKREEKAMTIYWD 272
Query: 165 SNGEEKLVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYR 215
+ ++ L +++L+ T +EK ++ L ++ ++ +Y R
Sbjct: 273 DHTKKPL-SMALNKVLI---TDHIEKLENEFVVLLDARDIEKITSLYALIR 319
Score = 83 (34.3 bits), Expect = 7.2e-13, Sum P(5) = 7.2e-13
Identities = 34/135 (25%), Positives = 53/135 (39%)
Query: 222 HDNYMEYVTNCFMDHSLFQRALKEAFKIFCNKT-----VGGFSS-----SEQLATFCDNI 271
HD + + F D +AL A F N G S SE LA + D +
Sbjct: 387 HDIFSKIFNESFPDDIPLAKALDNACGAFININEFALPAGSPKSATSKTSEMLAKYSDIL 446
Query: 272 LKKSGNEKLSDEAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRSRTLARKNQT 331
LKK+ +++ + Y++DKD F YR+ A+RL+ S T A +
Sbjct: 447 LKKATKPEVASDM---SDEDIITIFKYLTDKDAFETHYRRLFAKRLIHGTS-TSAEDEEN 502
Query: 332 GFEKYLRYNKNAHAG 346
++ N + G
Sbjct: 503 IIQRLQAANSMEYTG 517
Score = 73 (30.8 bits), Expect = 7.2e-13, Sum P(5) = 7.2e-13
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLER 546
++ L H LV+ECI + F V K+ I+ LI + YL+R
Sbjct: 762 KRNLPHTTLVNECIAQSHQRFNAKVSMVKRAIDSLIQKGYLQR 804
Score = 43 (20.2 bits), Expect = 7.2e-13, Sum P(5) = 7.2e-13
Identities = 18/99 (18%), Positives = 42/99 (42%)
Query: 8 EFDEGWEYIQKGIGKL---KRILEGLREPPF---SSEEYMALHITIYNMCSQNTPNNNSA 61
+ + W +I+ GI ++ ++ + + S YM ++ IYN C + ++
Sbjct: 10 DLEATWNFIEPGINQILGNEKNQASTSKRVYKILSPTMYMEVYTAIYNYCVNKSRSSGHF 69
Query: 62 SCKRRNIPGFDEFGLACFRDLVYDALKHKAKDAVIDERE 100
S R G +Y+ LK+ K+ +++ ++
Sbjct: 70 STDSRTGQSTILVGSE-----IYEKLKNYLKNYILNFKQ 103
Score = 39 (18.8 bits), Expect = 1.3e-08, Sum P(5) = 1.3e-08
Identities = 7/24 (29%), Positives = 16/24 (66%)
Query: 258 FSSSEQLATFCDNILKKSGNEKLS 281
F+ ++A+ +N +KK+G ++S
Sbjct: 322 FTLIPRMASVFENYVKKTGENEIS 345
>UNIPROTKB|F1P9Q4 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
Pfam:PF00888 PROSITE:PS50069 SMART:SM00182 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
EMBL:AAEX03003515 Ensembl:ENSCAFT00000023239 Uniprot:F1P9Q4
Length = 715
Score = 137 (53.3 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 54/217 (24%), Positives = 101/217 (46%)
Query: 309 YRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLN 368
Y KLAR +F + NQ F++ + NK A +++ +L G W +SS+
Sbjct: 499 YVNKLAR--MFQDIKVSEDLNQA-FKEMHKNNKLALPADSVNIKILNAGAWS--RSSE-- 551
Query: 369 PIF-NLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAA 427
+F +LP+++ + + FY+ RKL W + + I K E+ +L ++T+ A
Sbjct: 552 KVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLA 611
Query: 428 ILDLFNASNR--LSYSQVITQLNLTHDDLVRLLHSLSI---LYYKILIKEPDT---KSIS 479
+L +N R +S+ + L +L R L SL L ++L+ EP K +
Sbjct: 612 VLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKDFT 671
Query: 480 RSDYFELNSKFTDRMRGSRSLSHHR-KVLGHQQLVSE 515
F +N +F+ ++ ++ + ++G QL +E
Sbjct: 672 EGTLFSVNQEFS-LIKNAKVQKRGKINLIGRLQLTTE 707
Score = 101 (40.6 bits), Expect = 9.3e-06, Sum P(3) = 9.3e-06
Identities = 39/139 (28%), Positives = 61/139 (43%)
Query: 235 DHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSG-NEKLSDEAIXXXXXXXX 293
D ++F+ L K KT E LA +CD +L+K+ ++KL+ E I
Sbjct: 389 DATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVL 448
Query: 294 XXXXYISDKDLFAEFYRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHAGIDLS-VT 352
Y+ +KD+F +++ L RRL+ D S + + ++LR G+ V
Sbjct: 449 LVLKYVQNKDVFMRYHKAHLTRRLILDISAD--SEIEENMVEWLR-----EVGMPADYVN 501
Query: 353 VLATGFWPSYKSSDLNPIF 371
LA F S DLN F
Sbjct: 502 KLARMFQDIKVSEDLNQAF 520
Score = 87 (35.7 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 22/92 (23%), Positives = 43/92 (46%)
Query: 114 DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVE 173
D F + L T +Y + +++ ++ +YM+ A+ LK+E R RYL++ E VE
Sbjct: 195 DNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVE 254
Query: 174 KVQHELLVVYATQLLEKEQSGCGALFRGNKVD 205
+ + T E + C + + N+ +
Sbjct: 255 ALMECCVNALVTSFKETILAECQGMIKRNETE 286
Score = 40 (19.1 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 8/45 (17%), Positives = 25/45 (55%)
Query: 7 IEFDEGWEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMC 51
++F++ W++++ + KL LR+ + +++ L ++ +C
Sbjct: 8 LQFEDKWDFMRPIVLKL------LRQESVTKQQWFDLFSDVHAVC 46
>CGD|CAL0005748 [details] [associations]
symbol:orf19.7497 species:5476 "Candida albicans" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0031463 "Cul3-RING ubiquitin ligase
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 CGD:CAL0005748 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03869
EMBL:AACQ01000039 RefSeq:XP_718654.1 ProteinModelPortal:Q5AAJ3
STRING:Q5AAJ3 GeneID:3639684 KEGG:cal:CaO19.7497 Uniprot:Q5AAJ3
Length = 859
Score = 103 (41.3 bits), Expect = 4.8e-09, Sum P(5) = 4.8e-09
Identities = 29/116 (25%), Positives = 57/116 (49%)
Query: 391 KTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLF-----NASN--------- 436
K ++ L W G + + + E+ +ST+ A I+ LF NA
Sbjct: 621 KNDNKSLYWSPKFGSMDLRITYPSRTYEINLSTFAAIIMLLFAPQSTNADGSTVSAFDEM 680
Query: 437 -RLSYSQVITQLNLTHDDLVRLLHSLSIL-YYKILIKEPDTKSISRSDYFELNSKF 490
L+Y +++ + +L R L S+++ ++L+K P +K ++++D F+LN+KF
Sbjct: 681 KELTYEEILELTGIPEPELKRHLQSIAVAPKSRLLVKVPMSKDVNKNDVFKLNAKF 736
Score = 93 (37.8 bits), Expect = 4.8e-09, Sum P(5) = 4.8e-09
Identities = 17/51 (33%), Positives = 32/51 (62%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
R+ + H L+ E ++ L F+P++ K+RIE LI ++YL+R ++ N +
Sbjct: 805 RQSIKHNDLIEELLKQLSNRFQPSIILIKQRIEDLIDKEYLKRDTDDRNLY 855
Score = 77 (32.2 bits), Expect = 1.8e-06, Sum P(5) = 1.8e-06
Identities = 22/105 (20%), Positives = 47/105 (44%)
Query: 359 WPSYKSSDLNPIFNLPSQMIKCVEVFKRFYET--KTKHRKLSWIYSLGQCHINAKFELKN 416
W S ++ P F P Q+ ++ F F+ K ++ L W G + + +
Sbjct: 588 WFSRTENEETP-FKWPRQLRNTIKQFDEFWSNGKKNDNKSLYWSPKFGSMDLRITYPSRT 646
Query: 417 IELIISTYHAAILDLFNASNRLSYSQVITQLN----LTHDDLVRL 457
E+ +ST+ A I+ LF + + ++ + LT+++++ L
Sbjct: 647 YEINLSTFAAIIMLLFAPQSTNADGSTVSAFDEMKELTYEEILEL 691
Score = 56 (24.8 bits), Expect = 4.8e-09, Sum P(5) = 4.8e-09
Identities = 24/120 (20%), Positives = 46/120 (38%)
Query: 223 DNYMEYVTNCFMDHSLFQRALKEAFKIFCN----KTVGGFSSSEQLATFCDNILKK---- 274
D M+ N F ++ + ++ A + F N + ++ E L+ + D +K+
Sbjct: 394 DQLMQVWKNSFDENLMIEQTFTFAMRDFINGSNKRGPASVNAPELLSVYMDYFIKQLTKG 453
Query: 275 -SGNEKLS---DEAIXXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRSRTLARKNQ 330
S N+ +S + +I DKD F Y A+R L ++ N+
Sbjct: 454 SSSNKDISLKSGDQTEDLISNSIQFLRFIKDKDAFEANYANHFAKRFLNSKTGNSPSSNK 513
Score = 48 (22.0 bits), Expect = 4.8e-09, Sum P(5) = 4.8e-09
Identities = 14/65 (21%), Positives = 30/65 (46%)
Query: 116 FVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKV 175
F L+ + +S ++ + Y++ + +K E +RV YL + KLVE +
Sbjct: 223 FEPKFLKSSEESLYNLSQEFVSHNLGTKYLQLTTQFIKDEDNRVRFYLPPSTYPKLVELM 282
Query: 176 QHELL 180
+ ++
Sbjct: 283 NNIMI 287
Score = 40 (19.1 bits), Expect = 4.8e-09, Sum P(5) = 4.8e-09
Identities = 5/19 (26%), Positives = 12/19 (63%)
Query: 6 LIEFDEGWEYIQKGIGKLK 24
+I+FD+ W + I +++
Sbjct: 33 VIDFDKNWSVLSSAISQIQ 51
>FB|FBgn0036332 [details] [associations]
symbol:CG11261 species:7227 "Drosophila melanogaster"
[GO:0000152 "nuclear ubiquitin ligase complex" evidence=ISS]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069
SMART:SM00884 EMBL:AE014296 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HSSP:Q9JLV5 EMBL:AY069566 RefSeq:NP_648620.1 UniGene:Dm.950
SMR:Q9VU33 EnsemblMetazoa:FBtr0075899 GeneID:39474
KEGG:dme:Dmel_CG11261 UCSC:CG11261-RA FlyBase:FBgn0036332
InParanoid:Q9VU33 OMA:IVRIMER OrthoDB:EOG4DZ09D GenomeRNAi:39474
NextBio:813830 Uniprot:Q9VU33
Length = 670
Score = 109 (43.4 bits), Expect = 4.0e-07, Sum P(4) = 4.0e-07
Identities = 47/182 (25%), Positives = 83/182 (45%)
Query: 320 DRSRTLARKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIK 379
D+ RTL ++ F+ +L +K G D S+++ +L LP ++ +
Sbjct: 419 DKLRTLKKE----FQDHLN-SKGIKLGFDFRPKCFKND--GSFENFNLT----LPDELQQ 467
Query: 380 CVEVFKRFYETKTKHRK----LSWIYSLGQ--CHINAKFELKNIELIISTYHAAILDLFN 433
+ F+ FYE + K L+ S G+ CH+N + L +ST A+L LFN
Sbjct: 468 AWKEFRIFYEARKLQSKAIIQLNNELSSGEITCHLNQSVYI----LEVSTLQMAVLMLFN 523
Query: 434 ASNRLSYSQVITQLNLTHDDLVRLLHSLSILYYKILIKEPDTKSISRSDYFELNSKFTDR 493
R + +++T L + + L L + L Y I+ +++ +Y E+N FT+R
Sbjct: 524 RHERFTEQELVTALGVELETLQEALKQIKFLVY---IE------VNKVNYIEINMDFTNR 574
Query: 494 MR 495
R
Sbjct: 575 KR 576
Score = 76 (31.8 bits), Expect = 4.0e-07, Sum P(4) = 4.0e-07
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLER 546
+K L + +L+S E L KP V KKR++ L+ ++YLER
Sbjct: 618 QKQLEYSELISLVYEELKDRVKPQVSFIKKRLDYLVEREYLER 660
Score = 49 (22.3 bits), Expect = 4.0e-07, Sum P(4) = 4.0e-07
Identities = 19/88 (21%), Positives = 35/88 (39%)
Query: 235 DHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSGNEKLSDEAIXXXXXXXXX 294
DH+ + K N+ + L T+ + ++ K + S+EAI
Sbjct: 302 DHTKLAEVVDAVCKEEINRKGQIIDPTRLLVTYANELMTK---RQESEEAIIDELKRIVK 358
Query: 295 XXXYISDKDLFAEFYRKKLARRLLFDRS 322
++SD+ F + Y K L R + + S
Sbjct: 359 CVEFLSDEYKFIDMYLKALRIRQINETS 386
Score = 45 (20.9 bits), Expect = 9.9e-07, Sum P(4) = 9.9e-07
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 179 LLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYR 212
LLV YA +L+ K Q A+ +D+L R+ +
Sbjct: 330 LLVTYANELMTKRQESEEAI-----IDELKRIVK 358
Score = 44 (20.5 bits), Expect = 4.0e-07, Sum P(4) = 4.0e-07
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 35 FSSEEYMALHITIYNMCSQNTPNNNSASCKRRNI 68
F ++ M L+ IY C+ NN A R++
Sbjct: 35 FDGQKLMHLYHLIYKQCAAERNWNNPAQKNGRSL 68
>SGD|S000003235 [details] [associations]
symbol:CUL3 "Ubiquitin-protein ligase" species:4932
"Saccharomyces cerevisiae" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA;IC;ISS] [GO:0031461 "cullin-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0031463 "Cul3-RING
ubiquitin ligase complex" evidence=IMP;IDA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IMP] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 SGD:S000003235 GO:GO:0005634 GO:GO:0005737
EMBL:BK006941 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0004842
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0042787 GO:GO:0031463
InterPro:IPR016159 SUPFAM:SSF74788 KO:K03869 OrthoDB:EOG48H0BR
EMBL:AY387706 EMBL:Z72788 PIR:S64292 RefSeq:NP_011517.1
ProteinModelPortal:P53202 SMR:P53202 DIP:DIP-5506N IntAct:P53202
MINT:MINT-531464 STRING:P53202 PaxDb:P53202 EnsemblFungi:YGR003W
GeneID:852886 KEGG:sce:YGR003W CYGD:YGR003w HOGENOM:HOG000112081
OMA:SERSMLV NextBio:972541 Genevestigator:P53202 GermOnline:YGR003W
Uniprot:P53202
Length = 744
Score = 133 (51.9 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 54/261 (20%), Positives = 111/261 (42%)
Query: 227 EYVTNCFMDHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCD-NILKKSGNEKLSDEAI 285
EY++ ++DH + + K+A + + + S++ + + +I +K ++LS +
Sbjct: 386 EYLST-YVDHCMKRTKEKDAEIVKIKQDL--LDSTKLIGLLTEKDIFEKIYKKQLSRRLL 442
Query: 286 XXXXXXXXXXXXYISDKDLFAEFYRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNAHA 345
K + F+ KL L R ++ ++ ++ + N+
Sbjct: 443 QQRSLVEIEKWMVQMIKKVLGTFFTSKLEIML-----RDISLSSEM-YQAFQHSTINSIE 496
Query: 346 GIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQ 405
+ + VL WP ++ ++ +LP +M + + F+ +Y K K R L W + L
Sbjct: 497 YLSFAPQVLTRTSWPFQSTNPIDEGISLPPRMSQILAGFEGYYSLKYKERVLKWAHHLSV 556
Query: 406 CHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSIL- 464
I +F E+ S Y I LF L+ ++ ++ DD+ L+ S+S +
Sbjct: 557 IEIGCQFNSGYYEISFSVYAGVIFLLFEDYEELTLGEIYELTHIPIDDVKSLVMSMSTIP 616
Query: 465 YYKILIKEPDTKSISRS-DYF 484
KIL K + ++ S +YF
Sbjct: 617 RCKILKKSSSSGNMKFSVNYF 637
Score = 57 (25.1 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 12/48 (25%), Positives = 24/48 (50%)
Query: 507 LGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
L HQQL+ + K+ I+ LI ++Y++R ++P+ +
Sbjct: 693 LSHQQLLERTTKRTQSRLSLTPSILKRSIQLLIEKEYIQRNADDPSYY 740
>TAIR|locus:2049173 [details] [associations]
symbol:APC2 "AT2G04660" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA;TAS] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005819 "spindle"
evidence=IDA] [GO:0009561 "megagametogenesis" evidence=IMP]
[GO:0007267 "cell-cell signaling" evidence=RCA] [GO:0007276 "gamete
generation" evidence=RCA] [GO:0009616 "virus induced gene
silencing" evidence=RCA] [GO:0010267 "production of ta-siRNAs
involved in RNA interference" evidence=RCA] [GO:0032875 "regulation
of DNA endoreduplication" evidence=RCA] [GO:0035196 "production of
miRNAs involved in gene silencing by miRNA" evidence=RCA]
[GO:0051302 "regulation of cell division" evidence=RCA] [GO:0051510
"regulation of unidimensional cell growth" evidence=RCA]
InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888 PROSITE:PS01256
PROSITE:PS50069 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0051301 GO:GO:0007067 GO:GO:0005819
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511
GO:GO:0009561 eggNOG:COG5647 KO:K03349 InterPro:IPR014786
Pfam:PF08672 SMART:SM01013 SUPFAM:SSF75632 EMBL:AC006955
EMBL:AK118453 EMBL:AY138228 IPI:IPI00520644 PIR:H84459
RefSeq:NP_178543.2 UniGene:At.41283 ProteinModelPortal:Q8H1U5
SMR:Q8H1U5 IntAct:Q8H1U5 STRING:Q8H1U5 PaxDb:Q8H1U5 PRIDE:Q8H1U5
EnsemblPlants:AT2G04660.1 GeneID:815008 KEGG:ath:AT2G04660
TAIR:At2g04660 HOGENOM:HOG000265303 InParanoid:Q8H1U5 OMA:RIHNTLK
PhylomeDB:Q8H1U5 ProtClustDB:CLSN2690638 Genevestigator:Q8H1U5
GO:GO:0031461 Uniprot:Q8H1U5
Length = 865
Score = 142 (55.0 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 54/192 (28%), Positives = 88/192 (45%)
Query: 306 AEFYRKKLARRLLFDRSRT---LARKNQTGFEKYLRYNKNAHAGID-LSVTVLATGFWPS 361
A R ++ L D R + + +QTG E LR N+ +D L+ T+L+T FWP
Sbjct: 590 ASMQRCEIMLNDLIDSKRVNTNIKKASQTGAE--LRENE---LSVDTLTSTILSTNFWPP 644
Query: 362 YKSSDLNPIFNLPSQMIKCVEVF-KRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELI 420
+ L LP + K + + R++E KT RKL W +LG + +FE + ++
Sbjct: 645 IQDEPLE----LPGPVDKLLSDYANRYHEIKTP-RKLLWKKNLGTVKLELQFEDRAMQFT 699
Query: 421 ISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSILYYKILIKEPDTKSISR 480
+S HAAI+ F +Y + + + D L R ++ K +++E T + S
Sbjct: 700 VSPTHAAIIMQFQEKKSWTYKDLAEVIGIPIDALNR---RVNFWISKGVLRE-STGANSN 755
Query: 481 SDYFELNSKFTD 492
S L TD
Sbjct: 756 SSVLTLVESITD 767
>UNIPROTKB|H7C399 [details] [associations]
symbol:CUL3 "Cullin-3" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00884 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
EMBL:AC073052 EMBL:AC092679 HGNC:HGNC:2553 ChiTaRS:CUL3
ProteinModelPortal:H7C399 SMR:H7C399 Ensembl:ENST00000451538
Uniprot:H7C399
Length = 111
Score = 79 (32.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 515 ECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
E + L F P+ KKRIEGLI ++YL R PE+ +
Sbjct: 68 EVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVY 107
Score = 52 (23.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 403 LGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQ 446
+G + K+I L +ST+ IL LFN NR Y+ +TQ
Sbjct: 31 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFN--NREKYTFEVTQ 71
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.136 0.401 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 554 542 0.00095 119 3 11 22 0.36 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 106
No. of states in DFA: 615 (65 KB)
Total size of DFA: 317 KB (2163 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 45.88u 0.18s 46.06t Elapsed: 00:00:02
Total cpu time: 45.93u 0.18s 46.11t Elapsed: 00:00:02
Start: Fri May 10 17:31:19 2013 End: Fri May 10 17:31:21 2013
WARNINGS ISSUED: 1