BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043775
(554 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94AH6|CUL1_ARATH Cullin-1 OS=Arabidopsis thaliana GN=CUL1 PE=1 SV=1
Length = 738
Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/617 (56%), Positives = 407/617 (65%), Gaps = 131/617 (21%)
Query: 65 RRNIPGFDEFGLACFRDLVYDALKHKAKDAVI----DEREREQVDRALLANVLDIFVE-- 118
RR++P +E GL CFRDLVY+ L K K AVI ERE EQ+DRALL NVLDI+VE
Sbjct: 122 RRSLPPLNEVGLTCFRDLVYNELHSKVKQAVIALVDKEREGEQIDRALLKNVLDIYVEIG 181
Query: 119 -------------HMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQS 165
MLQDTSSYYSR +++WI +D CPDYM K+EECLKKER+RV+ YL S
Sbjct: 182 MGQMERYEEDFESFMLQDTSSYYSRKASSWIQEDSCPDYMLKSEECLKKERERVAHYLHS 241
Query: 166 NGEEKLVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG--P-- 221
+ E KLVEKVQHELLVV+A+QLLEKE SGC AL R +KVDDLSRMYR Y I G P
Sbjct: 242 SSEPKLVEKVQHELLVVFASQLLEKEHSGCRALLRDDKVDDLSRMYRLYHKILRGLEPVA 301
Query: 222 --------------------------------------------HDNYMEYVTNCFMDHS 237
HD YM YVT CF +H+
Sbjct: 302 NIFKQHVTAEGNALVQQAEDTATNQVANTASVQEQVLIRKVIELHDKYMVYVTECFQNHT 361
Query: 238 LFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSGNEKLSDEAIEETLEKVVKVLV 297
LF +ALKEAF+IFCNKTV G SS+E LATFCDNILKK G+EKLSDEAIE+TLEKVVK+L
Sbjct: 362 LFHKALKEAFEIFCNKTVAGSSSAELLATFCDNILKKGGSEKLSDEAIEDTLEKVVKLLA 421
Query: 298 YISDKDLFAEFYRKKLARRLLFDRSR-------------------------------TLA 326
YISDKDLFAEFYRKKLARRLLFDRS TLA
Sbjct: 422 YISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLA 481
Query: 327 RKNQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKR 386
R+NQ FE YL N A+ GIDL+VTVL TGFWPSYKS D+N LPS+MIKCVEVFK
Sbjct: 482 RENQNSFEDYLGSNPAANPGIDLTVTVLTTGFWPSYKSFDIN----LPSEMIKCVEVFKG 537
Query: 387 FYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQ 446
FYETKTKHRKL+WIYSLG CHIN KF+ K IELI+STY AA+L LFN +++LSY++++ Q
Sbjct: 538 FYETKTKHRKLTWIYSLGTCHINGKFDQKAIELIVSTYQAAVLLLFNTTDKLSYTEILAQ 597
Query: 447 LNLTHDDLVRLLHSLSILYYKILIKEPDTKSISRSDYFELNSKFTDRMRGSR-------- 498
LNL+H+DLVRLLHSLS YKIL+KEP+TK++S++D FE NSKFTDRMR +
Sbjct: 598 LNLSHEDLVRLLHSLSCAKYKILLKEPNTKTVSQNDAFEFNSKFTDRMRRIKIPLPPVDE 657
Query: 499 ---------------------SLSHHRKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEG 537
+ RKVLGHQQLVSEC+E L RMFKP +KA KKR+E
Sbjct: 658 RKKVVEDVDKDRRYAIDAAIVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMED 717
Query: 538 LISQDYLERYPENPNTF 554
LI++DYLER ENPN F
Sbjct: 718 LITRDYLERDKENPNMF 734
Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 52/73 (71%)
Query: 2 VQRRLIEFDEGWEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMCSQNTPNNNSA 61
++R+ I+ ++GW+Y+Q GI KLKRILEGL EP F SE+YM L+ TIYNMC+Q P++ S
Sbjct: 1 MERKTIDLEQGWDYMQTGITKLKRILEGLNEPAFDSEQYMMLYTTIYNMCTQKPPHDYSQ 60
Query: 62 SCKRRNIPGFDEF 74
+ F+E+
Sbjct: 61 QLYDKYREAFEEY 73
>sp|P0CH31|CLL1_ARATH Putative cullin-like protein 1 OS=Arabidopsis thaliana GN=At1g43140
PE=3 SV=1
Length = 721
Score = 579 bits (1492), Expect = e-164, Method: Compositional matrix adjust.
Identities = 336/713 (47%), Positives = 412/713 (57%), Gaps = 163/713 (22%)
Query: 1 MVQRRLIEFDEGWEYIQKGIGKLKRILEG----------------------LREPP--FS 36
++ + LI +EGW ++ G+ KL+RILE L++PP +S
Sbjct: 9 IMMKELILLEEGWSVMKTGVAKLQRILEDLSEPPFDPGQYINLYTIIYDMCLQQPPNDYS 68
Query: 37 SE--------------------------EYM--------ALHITIYNMCSQNTPNNNSAS 62
E EYM A H + S+ +
Sbjct: 69 QELYNKYRGVVDHYNKETVLPSMRERHGEYMLRELVKRWANHKILVRWLSRFCFYLDRFY 128
Query: 63 CKRRNIPGFDEFGLACFRDLVYDALKHKAKDAVI----DEREREQVDRALLANVLDI--- 115
RR +P ++ G F DLVY ++ +AKD ++ ERE EQ+DR L+ NV+D+
Sbjct: 129 VARRGLPTLNDVGFTSFHDLVYQEIQSEAKDVLLALIHKEREGEQIDRTLVKNVIDVYCG 188
Query: 116 ------------FVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYL 163
F +LQDT+SYYSR ++ W +D CPDYM KAEECLK E++RV+ YL
Sbjct: 189 NGVGQMVIYEEDFESFLLQDTASYYSRKASRWSQEDSCPDYMLKAEECLKLEKERVTNYL 248
Query: 164 QSNGEEKLVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG--P 221
S E KLVEKVQ+ELLVV A QL+E E SGC AL R +K+ DLSRMYR YR I G P
Sbjct: 249 HSTTEPKLVEKVQNELLVVVAKQLIENEHSGCLALLRDDKMGDLSRMYRLYRLIPQGLEP 308
Query: 222 ------------------------------------------HDNYMEYVTNCFMDHSLF 239
HD YM YV CF HSLF
Sbjct: 309 IADLFKQHVTAEGNALIKQAADAATNQDASASQVLVRKEIELHDKYMVYVDECFQKHSLF 368
Query: 240 QRALKEAFKIFCNKTVGGFSSSEQLATFCDNILK-KSGNEKLSDEAIEETLEKVVKVLVY 298
+ LKEAF++FCNKTV G SS+E LAT+CDNILK + G+EKLSDEA E TLEKVV +LVY
Sbjct: 369 HKLLKEAFEVFCNKTVAGASSAEILATYCDNILKTRGGSEKLSDEATEITLEKVVNLLVY 428
Query: 299 ISDKDLFAEFYRKKLARRLLFDRSR--------TLARKNQTGFEKYLRYNKNAHAGIDLS 350
ISDKDLFAEFYRKK ARRLLFDRS TLAR+ QT F YL N GID +
Sbjct: 429 ISDKDLFAEFYRKKQARRLLFDRSGIMKEVTDITLARELQTNFVDYLSANMTTKLGIDFT 488
Query: 351 VTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINA 410
VTVL TGFWPSYK++DLN LP++M+ CVE FK FY TKT R+LSWIYSLG CHI
Sbjct: 489 VTVLTTGFWPSYKTTDLN----LPTEMVNCVEAFKVFYGTKTNSRRLSWIYSLGTCHILG 544
Query: 411 KFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSILYYKILI 470
KFE K +EL++STY AA+L LFN + RLSY+++ QLNL+H+DLVRLLHSLS L YKILI
Sbjct: 545 KFEKKTMELVVSTYQAAVLLLFNNAERLSYTEISEQLNLSHEDLVRLLHSLSCLKYKILI 604
Query: 471 KEPDTKSISRSDYFELNSKFTDRMRGSR-----------------------------SLS 501
KEP +++IS++D FE NSKFTD+MR R +
Sbjct: 605 KEPMSRTISKTDTFEFNSKFTDKMRKIRVPLPPMDERKKVVEDVDKDRRYAIDAALVRIM 664
Query: 502 HHRKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
RKVL HQQLVSEC+E L +MFKP +K KKRIE LI++DYLER EN NTF
Sbjct: 665 KSRKVLAHQQLVSECVEHLSKMFKPDIKMIKKRIEDLINRDYLERDTENANTF 717
>sp|Q9SRZ0|CUL2_ARATH Cullin-2 OS=Arabidopsis thaliana GN=CUL2 PE=1 SV=1
Length = 742
Score = 554 bits (1427), Expect = e-157, Method: Compositional matrix adjust.
Identities = 322/735 (43%), Positives = 409/735 (55%), Gaps = 193/735 (26%)
Query: 9 FDEGWEYIQKGIGKLKRILEGL-REPPFSSEEYMALHITIYNMCSQNTPNNNSASC---- 63
+ GW ++ G+ KL++ILE + EPPF + M L+ T++N+C+Q PN+ S
Sbjct: 8 LEAGWSVMEAGVAKLQKILEEVPDEPPFDPVQRMQLYTTVHNLCTQKPPNDYSQQIYDRY 67
Query: 64 --------KRRNIPGFDE-FGLACFRDLV------------------------------- 83
K+ +P E G R+LV
Sbjct: 68 GGVYVDYNKQTVLPAIREKHGEYMLRELVKRWANQKILVRWLSHFFEYLDRFYTRRGSHP 127
Query: 84 --------------YDALKHKAKDAVI----DEREREQVDRALLANVLDI---------- 115
Y L+ KAKDAV+ ERE EQ+DRALL NV+D+
Sbjct: 128 TLSAVGFISFRDLVYQELQSKAKDAVLALIHKEREGEQIDRALLKNVIDVYCGNGMGELV 187
Query: 116 -----FVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEK 170
F +L+D++SYYSR ++ W ++ CPDYM KAEE L+ E++RV+ YL S E K
Sbjct: 188 KYEEDFESFLLEDSASYYSRNASRWNQENSCPDYMIKAEESLRLEKERVTNYLHSTTEPK 247
Query: 171 LVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG--P------- 221
LV KVQ+ELLVV A QL+E E SGC AL R +K+DDL+RMYR Y I G P
Sbjct: 248 LVAKVQNELLVVVAKQLIENEHSGCRALLRDDKMDDLARMYRLYHPIPQGLDPVADLFKQ 307
Query: 222 -----------------------------------------HDNYMEYVTNCFMDHSLFQ 240
HD +M YV CF HSLF
Sbjct: 308 HITVEGSALIKQATEAATDKAASTSGLKVQDQVLIRQLIDLHDKFMVYVDECFQKHSLFH 367
Query: 241 RALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSGN-EKLSDEAIEETLEKVVKVLVYI 299
+ALKEAF++FCNKTV G SS+E LAT+CDNILK G EKL +E +E TLEKVVK+LVYI
Sbjct: 368 KALKEAFEVFCNKTVAGVSSAEILATYCDNILKTGGGIEKLENEDLELTLEKVVKLLVYI 427
Query: 300 SDKDLFAEFYRKKLARRLLFDRS-------------------------------RTLARK 328
SDKDLFAEF+RKK ARRLLFDR+ TLA++
Sbjct: 428 SDKDLFAEFFRKKQARRLLFDRNGNDYHERSLLTKFKELLGAQFTSKMEGMLTDMTLAKE 487
Query: 329 NQTGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFY 388
+QT F ++L NK G+D +VTVL TGFWPSYK++DL NLP +M+ CVE FK +Y
Sbjct: 488 HQTNFVEFLSVNKTKKLGMDFTVTVLTTGFWPSYKTTDL----NLPIEMVNCVEAFKAYY 543
Query: 389 ETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLN 448
TKT R+LSWIYSLG C + KF+ K IE++++TY AA+L LFN + RLSY++++ QLN
Sbjct: 544 GTKTNSRRLSWIYSLGTCQLAGKFDKKTIEIVVTTYQAAVLLLFNNTERLSYTEILEQLN 603
Query: 449 LTHDDLVRLLHSLSILYYKILIKEPDTKSISRSDYFELNSKFTDRMRGSR---------- 498
L H+DL RLLHSLS L YKILIKEP +++IS +D FE NSKFTD+MR R
Sbjct: 604 LGHEDLARLLHSLSCLKYKILIKEPMSRNISNTDTFEFNSKFTDKMRRIRVPLPPMDERK 663
Query: 499 -------------------SLSHHRKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLI 539
+ RKVLGHQQLVSEC+E L +MFKP +K KKRIE LI
Sbjct: 664 KIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEHLSKMFKPDIKMIKKRIEDLI 723
Query: 540 SQDYLERYPENPNTF 554
S+DYLER +NPNTF
Sbjct: 724 SRDYLERDTDNPNTF 738
>sp|Q54NZ5|CUL3_DICDI Cullin-3 OS=Dictyostelium discoideum GN=culC PE=3 SV=1
Length = 769
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 176/641 (27%), Positives = 276/641 (43%), Gaps = 166/641 (25%)
Query: 63 CKRRNIPGFDEFGLACFRD------LVYDALKHKAKDAVIDEREREQVDRALLANVLDIF 116
K+ N+ + GL FRD + D L + V ERE E +DR L+ N++ +
Sbjct: 126 VKQNNLSSVFDLGLYLFRDNVAHCSTIKDRLLNTLLSMVQKEREGEVIDRILIKNIVQML 185
Query: 117 VE---------------HMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSR 161
++ +L TSS+Y S I CPDYM+K E CLK+E +RVS
Sbjct: 186 IDLGVNSKNVYIEDFEKPLLLKTSSHYQAQSQTLIQTCSCPDYMKKVEICLKEELERVSH 245
Query: 162 YLQSNGEEKLVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAGP 221
YL S+ E KL E + +L+ + L++ E SG ++ + +K++DL RMY + + G
Sbjct: 246 YLDSSSEPKLKEVCEKQLISNHMRTLIDMENSGLISMLKDDKIEDLKRMYNLFSRVSDGL 305
Query: 222 H--------------------------------------DNYMEYVTNCFMDHSLFQRAL 243
+ D Y + N + F ++
Sbjct: 306 NLMKDVISSYVKEIGRGIVMDEEKTKESGTYFQSLLDLKDKYDNLLQNALYNDKQFIHSI 365
Query: 244 KEAFKIFCNKTVGGFSSSEQLATFCDNILKKSGNEKLSDEAIEETLEKVVKVLVYISDKD 303
++AF+ F N S E ++ F D LKK G + +S+E ++ L+K++ + I +KD
Sbjct: 366 QQAFEYFINLNP---KSPEYISLFIDEKLKK-GLKGVSEEEVDIILDKILMLFRLIQEKD 421
Query: 304 LFAEFYRKKLARRLLFDRSRT-------------------------------LARKNQTG 332
+F ++Y++ LA+RLL RS + L++ +G
Sbjct: 422 VFEKYYKQHLAKRLLLGRSISDDAERNMIAKLKTECGYQFTSKLEGMFTDMRLSQDTMSG 481
Query: 333 FEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKT 392
F+ Y++ K A IDL+V VL TGFWP+ +++ N LP +++ C E FK +Y +
Sbjct: 482 FKTYIQNLKKA-LPIDLNVHVLTTGFWPTQNTANCN----LPREILLCCEAFKSYYLSNH 536
Query: 393 KHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHD 452
R L W ++G I A F K+ EL +S+Y IL LFN ++L++ ++ Q +
Sbjct: 537 NGRLLLWQTNMGTAEIKANFPSKSHELQVSSYQMVILLLFNDQSKLTFKEIADQTGIPTI 596
Query: 453 DLVRLLHSLSILYYKILIKE----------------------------------PDTKSI 478
DL R L +L+ KIL +E +KSI
Sbjct: 597 DLKRNLLALTNPKNKILDRELPSTTSSTTTTTTTATSSSTSTSPSSSSSSISTPTPSKSI 656
Query: 479 SRSDYFELNSKFTDRMRGSRSLS----------------------HH-----------RK 505
SD F N+KF ++ + ++ H RK
Sbjct: 657 DESDVFAFNTKFKSKLFRVKVMAVVQKETPVEEKETRDKVDEDRKHQIEASIVRIMKARK 716
Query: 506 VLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLER 546
L H LVSE I+ L F P KKRIE LI ++YLER
Sbjct: 717 TLEHSNLVSEVIKQLQSRFVPNPVIVKKRIESLIEREYLER 757
>sp|A2A432|CUL4B_MOUSE Cullin-4B OS=Mus musculus GN=Cul4b PE=1 SV=1
Length = 970
Score = 205 bits (522), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 163/602 (27%), Positives = 267/602 (44%), Gaps = 128/602 (21%)
Query: 68 IPGFDEFGLACFRDLVYDALKHKAK--DAVIDEREREQVDRALLANVL------------ 113
+P + GL FR + K + K D ++ ERE+ A+ ++L
Sbjct: 378 LPSIWDMGLELFRAHIISDQKVQTKTIDGILLLIERERNGEAIDRSLLRSLLSMLSDLQI 437
Query: 114 --DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKL 171
D F + LQ+T+ Y+ + + P+Y+ + L++E DR+ YL ++ L
Sbjct: 438 YQDSFEQQFLQETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTTQKSL 497
Query: 172 VEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAGPH---DNYMEY 228
+ V+ +LL + T +L+K G +L N++ DLS +Y+ + +R G ++EY
Sbjct: 498 IASVEKQLLGEHLTAILQK---GLNSLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIEY 554
Query: 229 VT--------------------------------NCFMDHSLFQRALKEAFKIFCNKTVG 256
+ CF+ + F A+KEAF+ F NK
Sbjct: 555 IKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDTCFLKNEKFINAMKEAFETFINKRPN 614
Query: 257 GFSSSEQLATFCDNILKKSGNEKLSDEAIEETLEKVVKVLVYISDKDLFAEFYRKKLARR 316
+E +A + D+ L+ +GN++ +DE +E+ L+K++ + +I KD+F FY+K LA+R
Sbjct: 615 --KPAELIAKYVDSKLR-AGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDLAKR 671
Query: 317 LLFDRSRT-------------------------------LARKNQTGFEKYLRYNKNAHA 345
LL +S + L++ F++Y++ N+N
Sbjct: 672 LLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYMQ-NQNVPG 730
Query: 346 GIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQ 405
I+L+V +L G+WP+Y +++ LP +M+K E+FK FY K RKL W +LG
Sbjct: 731 NIELTVNILTMGYWPTYVPMEVH----LPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGH 786
Query: 406 CHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSILY 465
C + A+F+ EL +S + +L +FN S ++ + +L R L SL+
Sbjct: 787 CVLKAEFKEGKKELQVSLFQTMVLLMFNEGEEFSLEEIKHATGIEDGELRRTLQSLACGK 846
Query: 466 YKILIKEPDTKSISRSDYFELNSKF------------------------TDRMRGSRS-- 499
++L K P K I D F N F T+R+ R
Sbjct: 847 ARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQ 906
Query: 500 -------LSHHRKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPN 552
+ RK L H LVSE L KPA KKRIE LI +DY+ER ENPN
Sbjct: 907 IDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPA--DLKKRIESLIDRDYMERDKENPN 964
Query: 553 TF 554
+
Sbjct: 965 QY 966
>sp|Q13620|CUL4B_HUMAN Cullin-4B OS=Homo sapiens GN=CUL4B PE=1 SV=4
Length = 913
Score = 203 bits (517), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 162/602 (26%), Positives = 269/602 (44%), Gaps = 128/602 (21%)
Query: 68 IPGFDEFGLACFR-DLVYDA-LKHKAKDAVIDEREREQVDRALLANVL------------ 113
+P + GL FR ++ D +++K D ++ ERE+ A+ ++L
Sbjct: 321 LPSIWDMGLELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSLLSMLSDLQI 380
Query: 114 --DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKL 171
D F + L++T+ Y+ + + P+Y+ + L++E DR+ YL ++ L
Sbjct: 381 YQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTTQKSL 440
Query: 172 VEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAGPH---DNYMEY 228
+ V+ +LL + T +L+K G L N++ DLS +Y+ + +R G ++EY
Sbjct: 441 IATVEKQLLGEHLTAILQK---GLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIEY 497
Query: 229 VTN--------------------------------CFMDHSLFQRALKEAFKIFCNKTVG 256
+ CF+ + F A+KEAF+ F NK
Sbjct: 498 IKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFETFINKRPN 557
Query: 257 GFSSSEQLATFCDNILKKSGNEKLSDEAIEETLEKVVKVLVYISDKDLFAEFYRKKLARR 316
+E +A + D+ L+ +GN++ +DE +E+ L+K++ + +I KD+F FY+K LA+R
Sbjct: 558 --KPAELIAKYVDSKLR-AGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDLAKR 614
Query: 317 LLFDRSRT-------------------------------LARKNQTGFEKYLRYNKNAHA 345
LL +S + L++ F++Y++ N+N
Sbjct: 615 LLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYMQ-NQNVPG 673
Query: 346 GIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQ 405
I+L+V +L G+WP+Y +++ LP +M+K E+FK FY K RKL W +LG
Sbjct: 674 NIELTVNILTMGYWPTYVPMEVH----LPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGH 729
Query: 406 CHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSILY 465
C + A+F+ EL +S + +L +FN S ++ + +L R L SL+
Sbjct: 730 CVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQSLACGK 789
Query: 466 YKILIKEPDTKSISRSDYFELNSKF------------------------TDRMRGSRS-- 499
++L K P K I D F N F T+R+ R
Sbjct: 790 ARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQ 849
Query: 500 -------LSHHRKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPN 552
+ RK L H LVSE L KPA KKRIE LI +DY+ER ENPN
Sbjct: 850 IDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPA--DLKKRIESLIDRDYMERDKENPN 907
Query: 553 TF 554
+
Sbjct: 908 QY 909
>sp|Q13619|CUL4A_HUMAN Cullin-4A OS=Homo sapiens GN=CUL4A PE=1 SV=3
Length = 759
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 166/603 (27%), Positives = 272/603 (45%), Gaps = 128/603 (21%)
Query: 67 NIPGFDEFGLACFRD-LVYDAL-KHKAKDAVI--DERER--EQVDRALLANVL------- 113
+P + GL FR ++ D + + K D ++ ERER E VDR+LL ++L
Sbjct: 166 TLPSIWDMGLELFRTHIISDKMVQSKTIDGILLLIERERSGEAVDRSLLRSLLGMLSDLQ 225
Query: 114 ---DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEK 170
D F L++T+ Y+ + + P+Y+ + L++E DRV YL + ++
Sbjct: 226 VYKDSFELKFLEETNCLYAAEGQRLMQEREVPEYLNHVSKRLEEEGDRVITYLDHSTQKP 285
Query: 171 LVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAGPH---DNYME 227
L+ V+ +LL + T +L+K G L N+V DL++MY+ + +R G ++ E
Sbjct: 286 LIACVEKQLLGEHLTAILQK---GLDHLLDENRVPDLAQMYQLFSRVRGGQQALLQHWSE 342
Query: 228 YVTN--------------------------------CFMDHSLFQRALKEAFKIFCNKTV 255
Y+ CF + F +KE+F+ F NK
Sbjct: 343 YIKTFGTAIVINPEKDKDMVQDLLDFKDKVDHVIEVCFQKNERFVNLMKESFETFINKRP 402
Query: 256 GGFSSSEQLATFCDNILKKSGNEKLSDEAIEETLEKVVKVLVYISDKDLFAEFYRKKLAR 315
+E +A D+ L+ +GN++ +DE +E TL+K++ + +I KD+F FY+K LA+
Sbjct: 403 N--KPAELIAKHVDSKLR-AGNKEATDEELERTLDKIMILFRFIHGKDVFEAFYKKDLAK 459
Query: 316 RLLFDRSRT-------------------------------LARKNQTGFEKYLRYNKNAH 344
RLL +S + L++ F+++++ N++
Sbjct: 460 RLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVHFKQHMQ-NQSDS 518
Query: 345 AGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLG 404
IDL+V +L G+WP+Y +++ L +MIK EVFK FY K RKL W +LG
Sbjct: 519 GPIDLTVNILTMGYWPTYTPMEVH----LTPEMIKLQEVFKAFYLGKHSGRKLQWQTTLG 574
Query: 405 QCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSIL 464
+ A+F+ E +S + +L +FN + S+ ++ + +L R L SL+
Sbjct: 575 HAVLKAEFKEGKKEFQVSLFQTLVLLMFNEGDGFSFEEIKMATGIEDSELRRTLQSLACG 634
Query: 465 YYKILIKEPDTKSISRSDYFELNSKF------------------------TDRMRGSRS- 499
++LIK P K + D F N +F T+R+ R
Sbjct: 635 KARVLIKSPKGKEVEDGDKFIFNGEFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQY 694
Query: 500 --------LSHHRKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENP 551
+ RK LGH LVSE L KP KKRIE LI +DY+ER +NP
Sbjct: 695 QIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPG--DLKKRIESLIDRDYMERDKDNP 752
Query: 552 NTF 554
N +
Sbjct: 753 NQY 755
>sp|Q9XIE9|CLL2_ARATH Putative cullin-like protein 2 OS=Arabidopsis thaliana GN=At1g59790
PE=3 SV=2
Length = 374
Score = 196 bits (498), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 133/353 (37%), Positives = 165/353 (46%), Gaps = 111/353 (31%)
Query: 1 MVQRRLIEFDEGWEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMCSQNTP---- 56
M + R I+F+EGW IQKGI KL RILEG EP F E L+ IY+MC Q +
Sbjct: 6 MSRPRQIKFEEGWSNIQKGITKLIRILEGEPEPTFYFSECFKLYTIIYDMCVQRSDYSQQ 65
Query: 57 -------------------------------------NNNSASCK--------------- 64
NN+ K
Sbjct: 66 LYEKYRKVIEDYTIQTVLPSLREKHDEDMLRELVKRWNNHKIMVKWLSKFFVYIDRHLVR 125
Query: 65 RRNIP--GFDEFGLACFRDLVYDALKHKAKDAVI----DEREREQVDRALLANVLDIFVE 118
R IP DE GL CF DLVY ++ AK+ VI ERE EQ+DRAL+ NVLDI+VE
Sbjct: 126 RSKIPIPSLDEVGLTCFLDLVYCEMQSTAKEVVIALIHKEREGEQIDRALVKNVLDIYVE 185
Query: 119 H---------------MLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYL 163
+ MLQDT+SYYSR ++ W +D CPDYM K EECLK ER+RV+ YL
Sbjct: 186 NGMGTLEKYEEDFESFMLQDTASYYSRKASRWTEEDSCPDYMIKVEECLKMERERVTHYL 245
Query: 164 QSNGEEKLVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTI--RAGP 221
S E KLVEK+Q+ELLV+ LE E SG AL R +K +DLSR+YR Y I R G
Sbjct: 246 HSITEPKLVEKIQNELLVMVTKNRLENEHSGFSALLRDDKKNDLSRIYRLYLPIPKRLGR 305
Query: 222 --------------------------------HDNYMEYVTNCFMDHSLFQRA 242
H+ ++ YV CF +H+LF +
Sbjct: 306 VADLFKKHITEEGNALIKQADDKTTNQLLIELHNKFIVYVIECFQNHTLFHKV 358
>sp|Q3TCH7|CUL4A_MOUSE Cullin-4A OS=Mus musculus GN=Cul4a PE=1 SV=1
Length = 759
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 145/540 (26%), Positives = 242/540 (44%), Gaps = 112/540 (20%)
Query: 114 DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVE 173
D F L++T+ Y+ + P+Y+ + L++E DRV YL + ++ L+
Sbjct: 229 DSFELKFLEETNCLYAAEGQRLMQDREVPEYLNHVSKRLEEEADRVITYLDHSTQKPLIA 288
Query: 174 KVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAGPH---DNYMEYVT 230
V+ +LL + T +L+K G L N+V DL++MY+ + ++ G H ++ EY+
Sbjct: 289 CVEKQLLGEHLTAILQK---GLEHLLDENRVPDLTQMYQLFSRVKGGQHALLQHWSEYIK 345
Query: 231 N--------------------------------CFMDHSLFQRALKEAFKIFCNKTVGGF 258
CF + F +KE+F+ F NK
Sbjct: 346 TFGTTIVINPEKDKDMVQDLLDFKDKVDHVVEVCFQRNERFINLMKESFETFINKRPN-- 403
Query: 259 SSSEQLATFCDNILKKSGNEKLSDEAIEETLEKVVKVLVYISDKDLFAEFYRKKLARRLL 318
+E +A D+ L+ +GN++ +DE +E L+K++ + +I KD+F FY+K LA+RLL
Sbjct: 404 KPAELIAKHVDSKLR-AGNKEATDEELERILDKIMILFRFIHGKDVFEAFYKKDLAKRLL 462
Query: 319 FDRSRT-------------------------------LARKNQTGFEKYLRYNKNAHAGI 347
+S + L++ F+++++ N++A I
Sbjct: 463 VGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVHFKQHMQ-NQSAPGPI 521
Query: 348 DLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCH 407
DL+V +L G+WP+Y +++ LP +M++ EVFK FY K RKL W +LG
Sbjct: 522 DLTVNILTMGYWPTYTPMEVH----LPPEMVRLQEVFKTFYLGKHSGRKLQWQTTLGHAV 577
Query: 408 INAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSILYYK 467
+ A F+ E +S + +L +FN + S+ ++ + +L R L SL+ +
Sbjct: 578 LKADFKEGKKEFQVSLFQTLVLLMFNEGDGFSFEEIKMATGIEDSELRRTLQSLACGKAR 637
Query: 468 ILIKEPDTKSISRSDYFELNSKF------------------------TDRMRGSRS---- 499
+LIK P K + D F N+ F T+R+ R
Sbjct: 638 VLIKSPKGKEVEDGDKFIFNADFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQID 697
Query: 500 -----LSHHRKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
+ RK LGH LVSE L KP KKRIE LI +DY+ER ++PN +
Sbjct: 698 AAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPG--DLKKRIESLIDRDYMERDKDSPNQY 755
>sp|Q9ZVH4|CUL3A_ARATH Cullin-3A OS=Arabidopsis thaliana GN=CUL3A PE=1 SV=1
Length = 732
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 164/593 (27%), Positives = 258/593 (43%), Gaps = 128/593 (21%)
Query: 74 FGLACFRDLVYDALKHKAK------DAVIDEREREQVDRALLANVLDIFVE--------- 118
GL +RD V K + D V ER E +DR L+ NV+ +F++
Sbjct: 136 MGLNLWRDNVVHFTKIHTRLLNTLLDLVQKERIGEVIDRGLMRNVIKMFMDLGESVYQED 195
Query: 119 ---HMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKV 175
L +S +Y S +I C DY++K+E+ L +E +RV+ YL + EEK+ V
Sbjct: 196 FEKPFLDASSEFYKVESQEFIESCDCGDYLKKSEKRLTEEIERVAHYLDAKSEEKITSVV 255
Query: 176 QHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG--------------- 220
+ E++ + +L+ E SG + +K +DL RMY +R + G
Sbjct: 256 EKEMIANHMQRLVHMENSGLVNMLLNDKYEDLGRMYNLFRRVTNGLVTVRDVMTSHLREM 315
Query: 221 -----------------------PHDNYMEYVTNCFMDHSLFQRALKEAFKIFCNKTVGG 257
D Y + + F + FQ AL +F+ F N
Sbjct: 316 GKQLVTDPEKSKDPVEFVQRLLDERDKYDKIINTAFGNDKTFQNALNSSFEYFINLNA-- 373
Query: 258 FSSSEQLATFCDNILKKSGNEKLSDEAIEETLEKVVKVLVYISDKDLFAEFYRKKLARRL 317
S E ++ F D+ L+K G + ++D +E L+KV+ + Y+ +KD+F ++Y++ LA+RL
Sbjct: 374 -RSPEFISLFVDDKLRK-GLKGITDVDVEVILDKVMMLFRYLQEKDVFEKYYKQHLAKRL 431
Query: 318 L--------FDRSRTLARKNQTGF----------------EKYLRYNKNAHA----GIDL 349
L +RS + K + G+ E +R +H G L
Sbjct: 432 LSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSEDTMRGFYGSHPELSEGPTL 491
Query: 350 SVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHIN 409
V VL TG WP+ + N LP+++ E F+ +Y R+LSW ++G I
Sbjct: 492 IVQVLTTGSWPTQPAVPCN----LPAEVSVLCEKFRSYYLGTHTGRRLSWQTNMGTADIK 547
Query: 410 AKF-ELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSILYYKI 468
A F + + EL +ST+ +L LFN S+RLSY ++ + DL R L SL+ + K
Sbjct: 548 AIFGKGQKHELNVSTFQMCVLMLFNNSDRLSYKEIEQATEIPAADLKRCLQSLACVKGKN 607
Query: 469 LI-KEPDTKSISRSDYFELNSKFT-------------------------DRMRGSRS--- 499
+I KEP +K I D F +N KFT R+ R
Sbjct: 608 VIKKEPMSKDIGEEDLFVVNDKFTSKFYKVKIGTVVAQKETEPEKQETRQRVEEDRKPQI 667
Query: 500 ------LSHHRKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLER 546
+ RK+L H +++E + L F KKRIE LI +D+LER
Sbjct: 668 EAAIVRIMKSRKILDHNNIIAEVTKQLQPRFLANPTEIKKRIESLIERDFLER 720
>sp|Q6DE95|CUL3A_XENLA Cullin-3-A OS=Xenopus laevis GN=cul3a PE=1 SV=1
Length = 768
Score = 181 bits (460), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 156/639 (24%), Positives = 270/639 (42%), Gaps = 152/639 (23%)
Query: 63 CKRRNIPGFDEFGLACFRDLVY------DALKHKAKDAVIDEREREQVDRALLANVLDI- 115
++ N+ GL FRD V D L+ D + ER+ E VDR + N +
Sbjct: 131 VQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQML 190
Query: 116 --------------FVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSR 161
F L+ ++ ++ S ++ ++ Y++K E + +E +RV
Sbjct: 191 MILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMH 250
Query: 162 YLQSNGEEKLVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTI---- 217
L + EE +V+ V+ EL+ + ++E E SG + + K +DL+ MY+ + +
Sbjct: 251 CLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGL 310
Query: 218 --------------------RAGPHDNYMEYVTNCFMDHSLFQRALKEAF---KIFCNKT 254
G N ++Y+ S F R L+E+F ++F
Sbjct: 311 KTMCECMSLYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFSNDRLFKQTI 370
Query: 255 VGGFS--------SSEQLATFCDNILKKSGNEKLSDEAIEETLEKVVKVLVYISDKDLFA 306
G F S E L+ F D+ LKK G + L+++ +E L+K + + ++ +KD+F
Sbjct: 371 AGDFEYFLNLNSRSPEYLSLFIDDKLKK-GVKGLTEQEVESILDKAMVLFRFMQEKDVFE 429
Query: 307 EFYRKKLARRLLFDRS-----------------------------RTLARKNQT--GFEK 335
+Y++ LARRLL ++S R ++ N T F +
Sbjct: 430 RYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQ 489
Query: 336 YLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHR 395
+L+ + G+DL+V VL TG+WP+ ++ P N+P E+F+RFY K R
Sbjct: 490 HLQTTGVSLGGVDLTVRVLTTGYWPTQSAT---PKCNIPPAPRHAFEIFRRFYLAKHSGR 546
Query: 396 KLSWIYSLGQCHINAKF-----------------------ELKNIELIISTYHAAILDLF 432
+L+ + +G +NA F K+I L +ST+ IL LF
Sbjct: 547 QLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKHI-LQVSTFQMTILMLF 605
Query: 433 NASNRLSYSQVITQLNLTHDDLVRLLHSLSI--LYYKILIKEPDTKSISRSDYFELNSKF 490
N ++ ++ ++ + ++ +LVR L SL+ ++L KEP +K I F +N +F
Sbjct: 606 NNRDKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHMFTVNDQF 665
Query: 491 TDRMRGSR-----------------------------------SLSHHRKVLGHQQLVSE 515
T ++ + + RK + H LV+E
Sbjct: 666 TSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAE 725
Query: 516 CIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
+ L F P+ KKRIEGLI ++YL R PE+ +
Sbjct: 726 VTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVY 764
>sp|Q6GPF3|CUL3B_XENLA Cullin-3-B OS=Xenopus laevis GN=cul3b PE=1 SV=1
Length = 768
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 156/639 (24%), Positives = 269/639 (42%), Gaps = 152/639 (23%)
Query: 63 CKRRNIPGFDEFGLACFRDLVY------DALKHKAKDAVIDEREREQVDRALLANVLDI- 115
++ N+ GL FRD V D L+ D + ER+ E VDR + N +
Sbjct: 131 VQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQML 190
Query: 116 --------------FVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSR 161
F L+ ++ ++ S ++ ++ Y++K E + +E +RV
Sbjct: 191 MILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMH 250
Query: 162 YLQSNGEEKLVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTI---- 217
L + EE +V+ V+ EL+ + ++E E SG + + K +DL+ MY+ + +
Sbjct: 251 CLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGL 310
Query: 218 --------------------RAGPHDNYMEYVTNCFMDHSLFQRALKEAF---KIFCNKT 254
G N ++Y+ S F R L+E+F ++F
Sbjct: 311 KTMCECMSLYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFSNDRLFKQTI 370
Query: 255 VGGFS--------SSEQLATFCDNILKKSGNEKLSDEAIEETLEKVVKVLVYISDKDLFA 306
G F S E L+ F D+ LKK G + L+++ +E L+K + + ++ +KD+F
Sbjct: 371 AGDFEYFLNLNSRSPEYLSLFIDDKLKK-GVKGLTEQEVESILDKAMVLFRFMQEKDVFE 429
Query: 307 EFYRKKLARRLLFDRS-----------------------------RTLARKNQT--GFEK 335
+Y++ LARRLL ++S R ++ N T F +
Sbjct: 430 RYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQ 489
Query: 336 YLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHR 395
+L+ + G+DL+V VL TG+WP+ ++ P N+P E+F+RFY K R
Sbjct: 490 HLQTTGVSLGGVDLTVRVLTTGYWPTQSAT---PKCNIPPSPRHAFEIFRRFYLAKHSGR 546
Query: 396 KLSWIYSLGQCHINAKF-----------------------ELKNIELIISTYHAAILDLF 432
+L+ + +G +NA F K+I L +ST+ IL LF
Sbjct: 547 QLTLQHHMGSADLNATFYGAVKKEDGSEVGVGGAQVTGSNTRKHI-LQVSTFQMTILMLF 605
Query: 433 NASNRLSYSQVITQLNLTHDDLVRLLHSLSI--LYYKILIKEPDTKSISRSDYFELNSKF 490
N + ++ ++ + ++ +LVR L SL+ ++L KEP +K I F +N +F
Sbjct: 606 NNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHMFTVNDQF 665
Query: 491 TDRMRGSR-----------------------------------SLSHHRKVLGHQQLVSE 515
T ++ + + RK + H LV+E
Sbjct: 666 TSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAE 725
Query: 516 CIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
+ L F P+ KKRIEGLI ++YL R PE+ +
Sbjct: 726 VTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVY 764
>sp|A4IHP4|CUL3_XENTR Cullin-3 OS=Xenopus tropicalis GN=cul3 PE=2 SV=1
Length = 768
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 156/639 (24%), Positives = 269/639 (42%), Gaps = 152/639 (23%)
Query: 63 CKRRNIPGFDEFGLACFRDLVY------DALKHKAKDAVIDEREREQVDRALLANVLDI- 115
++ N+ GL FRD V D L+ D + ER+ E VDR + N +
Sbjct: 131 VQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQML 190
Query: 116 --------------FVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSR 161
F L+ ++ ++ S ++ ++ Y++K E + +E +RV
Sbjct: 191 MILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMH 250
Query: 162 YLQSNGEEKLVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTI---- 217
L + EE +V+ V+ EL+ + ++E E SG + + K +DL+ MY+ + +
Sbjct: 251 CLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGL 310
Query: 218 --------------------RAGPHDNYMEYVTNCFMDHSLFQRALKEAF---KIFCNKT 254
G N ++Y+ S F R L+E+F ++F
Sbjct: 311 KTMCECMSLYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFSNDRLFKQTI 370
Query: 255 VGGFS--------SSEQLATFCDNILKKSGNEKLSDEAIEETLEKVVKVLVYISDKDLFA 306
G F S E L+ F D+ LKK G + L+++ +E L+K + + ++ +KD+F
Sbjct: 371 AGDFEYFLNLNSRSPEYLSLFIDDKLKK-GVKGLTEQEVESILDKAMVLFRFMQEKDVFE 429
Query: 307 EFYRKKLARRLLFDRS-----------------------------RTLARKNQT--GFEK 335
+Y++ LARRLL ++S R ++ N T F +
Sbjct: 430 RYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQ 489
Query: 336 YLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHR 395
+L+ + G+DL+V VL TG+WP+ ++ P N+P E+F+RFY K R
Sbjct: 490 HLQTTGVSLGGVDLTVRVLTTGYWPTQSAT---PKCNIPPAPRHAFEIFRRFYLAKHSGR 546
Query: 396 KLSWIYSLGQCHINAKF-----------------------ELKNIELIISTYHAAILDLF 432
+L+ + +G +NA F K+I L +ST+ IL LF
Sbjct: 547 QLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKHI-LQVSTFQMTILMLF 605
Query: 433 NASNRLSYSQVITQLNLTHDDLVRLLHSLSI--LYYKILIKEPDTKSISRSDYFELNSKF 490
N + ++ ++ + ++ +LVR L SL+ ++L KEP +K I F +N +F
Sbjct: 606 NNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHMFTVNDQF 665
Query: 491 TDRMRGSR-----------------------------------SLSHHRKVLGHQQLVSE 515
T ++ + + RK + H LV+E
Sbjct: 666 TSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAE 725
Query: 516 CIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
+ L F P+ KKRIEGLI ++YL R PE+ +
Sbjct: 726 VTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVY 764
>sp|Q9C9L0|CUL3B_ARATH Cullin-3B OS=Arabidopsis thaliana GN=CUL3B PE=1 SV=1
Length = 732
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 160/594 (26%), Positives = 261/594 (43%), Gaps = 128/594 (21%)
Query: 73 EFGLACFRD-LVYDA-----LKHKAKDAVIDEREREQVDRALLANVLDIFV---EHMLQD 123
E GL +RD +VY + L + D V ER E +DR L+ NV+ +F+ E + QD
Sbjct: 135 ELGLHLWRDNVVYSSKIQTRLLNTLLDLVHKERTGEVIDRVLMRNVIKMFMDLGESVYQD 194
Query: 124 ---------TSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEK 174
++ +Y S +I C +Y++KAE+ L +E +RV YL + E K+
Sbjct: 195 DFEKPFLEASAEFYKVESMEFIESCDCGEYLKKAEKPLVEEVERVVNYLDAKSEAKITSV 254
Query: 175 VQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG-------------- 220
V+ E++ + +L+ E SG + +K +D+ RMY +R + G
Sbjct: 255 VEREMIANHVQRLVHMENSGLVNMLLNDKYEDMGRMYSLFRRVANGLVTVRDVMTLHLRE 314
Query: 221 ------------------------PHDNYMEYVTNCFMDHSLFQRALKEAFKIFCNKTVG 256
D Y + F + FQ AL +F+ F N
Sbjct: 315 MGKQLVTDPEKSKDPVEFVQRLLDERDKYDRIINMAFNNDKTFQNALNSSFEYFVNLNT- 373
Query: 257 GFSSSEQLATFCDNILKKSGNEKLSDEAIEETLEKVVKVLVYISDKDLFAEFYRKKLARR 316
S E ++ F D+ L+K G + + +E ++ L+KV+ + Y+ +KD+F ++Y++ LA+R
Sbjct: 374 --RSPEFISLFVDDKLRK-GLKGVGEEDVDLILDKVMMLFRYLQEKDVFEKYYKQHLAKR 430
Query: 317 LL--------FDRSRTLARKNQTGF------EKYLRYNKNAH--------------AGID 348
LL +R+ + K + G+ E K +H G
Sbjct: 431 LLSGKTVSDDAERNLIVKLKTECGYQFTSKLEGMFTDMKTSHDTLLGFYNSHPELSEGPT 490
Query: 349 LSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHI 408
L V VL TG WP+ + NLP+++ E F+ +Y R+LSW ++G I
Sbjct: 491 LVVQVLTTGSWPTQPTIQC----NLPAEVSVLCEKFRSYYLGTHTGRRLSWQTNMGTADI 546
Query: 409 NAKF-ELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSILYYK 467
A F + + EL +ST+ +L LFN S+RLSY ++ + DL R L S++ + K
Sbjct: 547 KAVFGKGQKHELNVSTFQMCVLMLFNNSDRLSYKEIEQATEIPTPDLKRCLQSMACVKGK 606
Query: 468 -ILIKEPDTKSISRSDYFELNSKFTD-------------------------RMRGSRS-- 499
+L KEP +K I+ D+F +N +F R+ R
Sbjct: 607 NVLRKEPMSKEIAEEDWFVVNDRFASKFYKVKIGTVVAQKETEPEKQETRQRVEEDRKPQ 666
Query: 500 -------LSHHRKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLER 546
+ R+VL H +++E + L F KKRIE LI +D+LER
Sbjct: 667 IEAAIVRIMKSRRVLDHNNIIAEVTKQLQTRFLANPTEIKKRIESLIERDFLER 720
>sp|Q9JLV5|CUL3_MOUSE Cullin-3 OS=Mus musculus GN=Cul3 PE=1 SV=1
Length = 768
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 156/639 (24%), Positives = 269/639 (42%), Gaps = 152/639 (23%)
Query: 63 CKRRNIPGFDEFGLACFRDLVY------DALKHKAKDAVIDEREREQVDRALLANVLDI- 115
++ N+ GL FRD V D L+ D + ER+ E VDR + N +
Sbjct: 131 VQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQML 190
Query: 116 --------------FVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSR 161
F L+ ++ ++ S ++ ++ Y++K E + +E +RV
Sbjct: 191 MILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMH 250
Query: 162 YLQSNGEEKLVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTI---- 217
L + EE +V+ V+ EL+ + ++E E SG + + K +DL+ MY+ + +
Sbjct: 251 CLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGL 310
Query: 218 --------------------RAGPHDNYMEYVTNCFMDHSLFQRALKEAF---KIFCNKT 254
G N ++Y+ S F R L+E+F ++F
Sbjct: 311 KTMCECMSCYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTI 370
Query: 255 VGGFS--------SSEQLATFCDNILKKSGNEKLSDEAIEETLEKVVKVLVYISDKDLFA 306
G F S E L+ F D+ LKK G + L+++ +E L+K + + ++ +KD+F
Sbjct: 371 AGDFEYFLNLNSRSPEYLSLFIDDKLKK-GVKGLTEQEVETILDKAMVLFRFMQEKDVFE 429
Query: 307 EFYRKKLARRLLFDRS-----------------------------RTLARKNQT--GFEK 335
+Y++ LARRLL ++S R ++ N T F +
Sbjct: 430 RYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQ 489
Query: 336 YLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHR 395
+L+ + G+DL+V VL TG+WP+ ++ P N+P E+F+RFY K R
Sbjct: 490 HLQATGVSLGGVDLTVRVLTTGYWPTQSAT---PKCNIPPAPRHAFEIFRRFYLAKHSGR 546
Query: 396 KLSWIYSLGQCHINAKF-----------------------ELKNIELIISTYHAAILDLF 432
+L+ + +G +NA F K+I L +ST+ IL LF
Sbjct: 547 QLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKHI-LQVSTFQMTILMLF 605
Query: 433 NASNRLSYSQVITQLNLTHDDLVRLLHSLSI--LYYKILIKEPDTKSISRSDYFELNSKF 490
N + ++ ++ + ++ +LVR L SL+ ++L KEP +K I F +N +F
Sbjct: 606 NNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHIFTVNDQF 665
Query: 491 TDRMRGSR-----------------------------------SLSHHRKVLGHQQLVSE 515
T ++ + + RK + H LV+E
Sbjct: 666 TSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAE 725
Query: 516 CIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
+ L F P+ KKRIEGLI ++YL R PE+ +
Sbjct: 726 VTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVY 764
>sp|B5DF89|CUL3_RAT Cullin-3 OS=Rattus norvegicus GN=Cul3 PE=1 SV=2
Length = 768
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 156/639 (24%), Positives = 269/639 (42%), Gaps = 152/639 (23%)
Query: 63 CKRRNIPGFDEFGLACFRDLVY------DALKHKAKDAVIDEREREQVDRALLANVLDI- 115
++ N+ GL FRD V D L+ D + ER+ E VDR + N +
Sbjct: 131 VQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQML 190
Query: 116 --------------FVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSR 161
F L+ ++ ++ S ++ ++ Y++K E + +E +RV
Sbjct: 191 MILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMH 250
Query: 162 YLQSNGEEKLVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTI---- 217
L + EE +V+ V+ EL+ + ++E E SG + + K +DL+ MY+ + +
Sbjct: 251 CLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGL 310
Query: 218 --------------------RAGPHDNYMEYVTNCFMDHSLFQRALKEAF---KIFCNKT 254
G N ++Y+ S F R L+E+F ++F
Sbjct: 311 KTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTI 370
Query: 255 VGGFS--------SSEQLATFCDNILKKSGNEKLSDEAIEETLEKVVKVLVYISDKDLFA 306
G F S E L+ F D+ LKK G + L+++ +E L+K + + ++ +KD+F
Sbjct: 371 AGDFEYFLNLNSRSPEYLSLFIDDKLKK-GVKGLTEQEVETILDKAMVLFRFMQEKDVFE 429
Query: 307 EFYRKKLARRLLFDRS-----------------------------RTLARKNQT--GFEK 335
+Y++ LARRLL ++S R ++ N T F +
Sbjct: 430 RYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQ 489
Query: 336 YLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHR 395
+L+ + G+DL+V VL TG+WP+ ++ P N+P E+F+RFY K R
Sbjct: 490 HLQATGVSLGGVDLTVRVLTTGYWPTQSAT---PKCNIPPAPRHAFEIFRRFYLAKHSGR 546
Query: 396 KLSWIYSLGQCHINAKF-----------------------ELKNIELIISTYHAAILDLF 432
+L+ + +G +NA F K+I L +ST+ IL LF
Sbjct: 547 QLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKHI-LQVSTFQMTILMLF 605
Query: 433 NASNRLSYSQVITQLNLTHDDLVRLLHSLSI--LYYKILIKEPDTKSISRSDYFELNSKF 490
N + ++ ++ + ++ +LVR L SL+ ++L KEP +K I F +N +F
Sbjct: 606 NNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHIFTVNDQF 665
Query: 491 TDRMRGSR-----------------------------------SLSHHRKVLGHQQLVSE 515
T ++ + + RK + H LV+E
Sbjct: 666 TSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAE 725
Query: 516 CIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
+ L F P+ KKRIEGLI ++YL R PE+ +
Sbjct: 726 VTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVY 764
>sp|Q13618|CUL3_HUMAN Cullin-3 OS=Homo sapiens GN=CUL3 PE=1 SV=2
Length = 768
Score = 179 bits (453), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 156/639 (24%), Positives = 267/639 (41%), Gaps = 152/639 (23%)
Query: 63 CKRRNIPGFDEFGLACFRDLVY------DALKHKAKDAVIDEREREQVDRALLANVLDI- 115
++ N+ GL FRD V D L+ D + ER+ E VDR + N +
Sbjct: 131 VQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQML 190
Query: 116 --------------FVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSR 161
F L+ ++ ++ S ++ ++ Y++K E + +E +RV
Sbjct: 191 MILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMH 250
Query: 162 YLQSNGEEKLVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTI---- 217
L + EE +V+ V+ EL+ + ++E E SG + + K +DL MY+ + +
Sbjct: 251 CLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLGCMYKLFSRVPNGL 310
Query: 218 --------------------RAGPHDNYMEYVTNCFMDHSLFQRALKEAF---KIFCNKT 254
G N ++Y+ S F R L E+F ++F
Sbjct: 311 KTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLLESFNNDRLFKQTI 370
Query: 255 VGGFS--------SSEQLATFCDNILKKSGNEKLSDEAIEETLEKVVKVLVYISDKDLFA 306
G F S E L+ F D+ LKK G + L+++ +E L+K + + ++ +KD+F
Sbjct: 371 AGDFEYFLNLNSRSPEYLSLFIDDKLKK-GVKGLTEQEVETILDKAMVLFRFMQEKDVFE 429
Query: 307 EFYRKKLARRLLFDRS-----------------------------RTLARKNQT--GFEK 335
+Y++ LARRLL ++S R ++ N T F +
Sbjct: 430 RYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQ 489
Query: 336 YLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHR 395
+L+ + G+DL+V VL TG+WP+ ++ P N+P E+F+RFY K R
Sbjct: 490 HLQATGVSLGGVDLTVRVLTTGYWPTQSAT---PKCNIPPAPRHAFEIFRRFYLAKHSGR 546
Query: 396 KLSWIYSLGQCHINAKF-----------------------ELKNIELIISTYHAAILDLF 432
+L+ + +G +NA F K+I L +ST+ IL LF
Sbjct: 547 QLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKHI-LQVSTFQMTILMLF 605
Query: 433 NASNRLSYSQVITQLNLTHDDLVRLLHSLSI--LYYKILIKEPDTKSISRSDYFELNSKF 490
N + ++ ++ + ++ +LVR L SL+ ++L KEP +K I F +N +F
Sbjct: 606 NNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIENGHIFTVNDQF 665
Query: 491 TDRMRGSR-----------------------------------SLSHHRKVLGHQQLVSE 515
T ++ + + RK + H LV+E
Sbjct: 666 TSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAE 725
Query: 516 CIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
+ L F P+ KKRIEGLI ++YL R PE+ +
Sbjct: 726 VTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVY 764
>sp|Q8LGH4|CUL4_ARATH Cullin-4 OS=Arabidopsis thaliana GN=CUL4 PE=1 SV=1
Length = 792
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 161/600 (26%), Positives = 263/600 (43%), Gaps = 122/600 (20%)
Query: 67 NIPGFDEFGLACFR---DLVYDALKHKAKDAV-IDERER--EQVDRALLANVLDIFV--- 117
N+ E GL FR L + + K + + E+ER E V+R LL+++L +F
Sbjct: 199 NVRSLWEMGLQLFRKHLSLAPEVEQRTVKGLLSMIEKERLAEAVNRTLLSHLLKMFTALG 258
Query: 118 -------EHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEK 170
+ L+ TS +Y+ ++ + P+Y++ E L +E +R Y+ + +
Sbjct: 259 IYMESFEKPFLEGTSEFYAAEGMKYMQQSDVPEYLKHVEGRLHEENERCILYIDAVTRKP 318
Query: 171 LVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRA-----GPHDNY 225
L+ V+ +LL + +LEK G L G + +DL RM + + A +Y
Sbjct: 319 LITTVERQLLERHILVVLEK---GFTTLMDGRRTEDLQRMQTLFSRVNALESLRQALSSY 375
Query: 226 M-----EYVTNCFMDHSLFQRAL----------KEAF---KIFCNKTVGGFS-------- 259
+ + V + D + Q L +E+F + F N F
Sbjct: 376 VRKTGQKIVMDEEKDKDMVQSLLDFKASLDIIWEESFYKNESFGNTIKDSFEHLINLRQN 435
Query: 260 -SSEQLATFCDNILKKSGNEKLSDEAIEETLEKVVKVLVYISDKDLFAEFYRKKLARRLL 318
+E +A F D L+ +GN+ S+E +E LEKV+ + +I KD+F FY+K LA+RLL
Sbjct: 436 RPAELIAKFLDEKLR-AGNKGTSEEELESVLEKVLVLFRFIQGKDVFEAFYKKDLAKRLL 494
Query: 319 FDRSRT-------------------------------LARKNQTGFEKYLRYNKNAHAGI 347
+S + L+++ F++ + +GI
Sbjct: 495 LGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGI 554
Query: 348 DLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCH 407
++SV VL TG+WP+Y D+ LP ++ ++FK FY +K R+L W SLG C
Sbjct: 555 EMSVHVLTTGYWPTYPPMDVK----LPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCV 610
Query: 408 INAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSILYYK 467
+ A F EL +S + A +L LFN + +LS+ + ++ +L R L SL+ +
Sbjct: 611 LKADFSKGKKELAVSLFQAVVLMLFNDAMKLSFEDIKDSTSIEDKELRRTLQSLACGKVR 670
Query: 468 ILIKEPDTKSISRSDYFELNSKF------------------------TDRMRGSRS---- 499
+L K P + + D FE N +F T+R+ R
Sbjct: 671 VLQKNPKGRDVEDGDEFEFNDEFAAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQID 730
Query: 500 -----LSHHRKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
+ RKVL H L++E + L KPA KKRIE LI ++YLER NP +
Sbjct: 731 AAIVRIMKTRKVLSHTLLITELFQQLKFPIKPA--DLKKRIESLIDREYLEREKSNPQIY 788
>sp|Q5R4G6|CUL1_PONAB Cullin-1 OS=Pongo abelii GN=CUL1 PE=2 SV=1
Length = 776
Score = 155 bits (393), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 158/632 (25%), Positives = 257/632 (40%), Gaps = 154/632 (24%)
Query: 65 RRNIPGFDEFGLACFRDLVYDALKHKAKDAVID----EREREQVDRALLANVLDIFVE-- 118
R+ I L +RD ++ L + +AV+ ER E ++ L++ V+ +VE
Sbjct: 153 RKGIYEIYSLALVTWRDCLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELG 212
Query: 119 ----------------------HMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKER 156
L DT +Y+R ST ++ ++P +YM+KAE L +E+
Sbjct: 213 LNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQ 272
Query: 157 DRVSRYLQSNGEEKLVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRT 216
RV YL + +++L K + L+ + LE + L +K +DL RMY
Sbjct: 273 RRVQVYLHESTQDELARKCEQVLIEKH----LEIFHTEFQNLLDADKNEDLGRMYNLVSR 328
Query: 217 IRAG----------------------------------------PHDNYMEYVTNCFMDH 236
I+ G H Y V + F +
Sbjct: 329 IQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNND 388
Query: 237 SLFQRALKEAFKIFCNKTV------GGFSSSEQLATFCDNILKKSGNEKLSDEA-IEETL 289
+ F AL +A F N S E LA +CD++LKKS K +EA +E+TL
Sbjct: 389 AGFVAALDKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKSS--KNPEEAELEDTL 446
Query: 290 EKVVKVLVYISDKDLFAEFYRKKLARRLLFDRSRT-------LAR-KNQTGF-------- 333
+V+ V YI DKD+F +FY K LA+RL+ S + +++ K GF
Sbjct: 447 NQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQR 506
Query: 334 ------------EKYLRYNKNAHA-GIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKC 380
E++ ++ N+ +D S+ VL++G WP +S F LPS++ +
Sbjct: 507 MFQDIGVSKDLNEQFKKHLTNSEPLDLDFSIQVLSSGSWPFQQSC----TFALPSELERS 562
Query: 381 VEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSY 440
+ F FY ++ RKL+W+Y L + + L ST+ AIL +N + +
Sbjct: 563 YQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYTV 622
Query: 441 SQVITQLNLTHDDLVRLLHSLSILYYKILIKEPDTKSISRSDY----------------- 483
Q+ + D L ++L L L K+L+ E + ++ +
Sbjct: 623 QQLTDSTQIKMDILAQVLQIL--LKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKL 680
Query: 484 -FELNSKFTDRMRGSRSLSHH--------------------RKVLGHQQLVSECIELLGR 522
+N + + +H RKVL HQQL+ E + L
Sbjct: 681 RVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSS 740
Query: 523 MFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
FKP V KK I+ LI ++YLER +T+
Sbjct: 741 RFKPRVPVIKKCIDILIEKEYLERVDGEKDTY 772
>sp|Q13616|CUL1_HUMAN Cullin-1 OS=Homo sapiens GN=CUL1 PE=1 SV=2
Length = 776
Score = 155 bits (393), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 158/632 (25%), Positives = 257/632 (40%), Gaps = 154/632 (24%)
Query: 65 RRNIPGFDEFGLACFRDLVYDALKHKAKDAVID----EREREQVDRALLANVLDIFVE-- 118
R+ I L +RD ++ L + +AV+ ER E ++ L++ V+ +VE
Sbjct: 153 RKGIYEIYSLALVTWRDCLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELG 212
Query: 119 ----------------------HMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKER 156
L DT +Y+R ST ++ ++P +YM+KAE L +E+
Sbjct: 213 LNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQ 272
Query: 157 DRVSRYLQSNGEEKLVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRT 216
RV YL + +++L K + L+ + LE + L +K +DL RMY
Sbjct: 273 RRVQVYLHESTQDELARKCEQVLIEKH----LEIFHTEFQNLLDADKNEDLGRMYNLVSR 328
Query: 217 IRAG----------------------------------------PHDNYMEYVTNCFMDH 236
I+ G H Y V + F +
Sbjct: 329 IQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNND 388
Query: 237 SLFQRALKEAFKIFCNKTV------GGFSSSEQLATFCDNILKKSGNEKLSDEA-IEETL 289
+ F AL +A F N S E LA +CD++LKKS K +EA +E+TL
Sbjct: 389 AGFVAALDKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKSS--KNPEEAELEDTL 446
Query: 290 EKVVKVLVYISDKDLFAEFYRKKLARRLLFDRSRT-------LAR-KNQTGF-------- 333
+V+ V YI DKD+F +FY K LA+RL+ S + +++ K GF
Sbjct: 447 NQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQR 506
Query: 334 ------------EKYLRYNKNAHA-GIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKC 380
E++ ++ N+ +D S+ VL++G WP +S F LPS++ +
Sbjct: 507 MFQDIGVSKDLNEQFKKHLTNSEPLDLDFSIQVLSSGSWPFQQSC----TFALPSELERS 562
Query: 381 VEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSY 440
+ F FY ++ RKL+W+Y L + + L ST+ AIL +N + +
Sbjct: 563 YQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYTV 622
Query: 441 SQVITQLNLTHDDLVRLLHSLSILYYKILIKEPDTKSISRSDY----------------- 483
Q+ + D L ++L L L K+L+ E + ++ +
Sbjct: 623 QQLTDSTQIKMDILAQVLQIL--LKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKL 680
Query: 484 -FELNSKFTDRMRGSRSLSHH--------------------RKVLGHQQLVSECIELLGR 522
+N + + +H RKVL HQQL+ E + L
Sbjct: 681 RVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSS 740
Query: 523 MFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
FKP V KK I+ LI ++YLER +T+
Sbjct: 741 RFKPRVPVIKKCIDILIEKEYLERVDGEKDTY 772
>sp|Q9WTX6|CUL1_MOUSE Cullin-1 OS=Mus musculus GN=Cul1 PE=1 SV=1
Length = 776
Score = 155 bits (392), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 158/632 (25%), Positives = 257/632 (40%), Gaps = 154/632 (24%)
Query: 65 RRNIPGFDEFGLACFRDLVYDALKHKAKDAVID----EREREQVDRALLANVLDIFVE-- 118
R+ I L +RD ++ L + +AV+ ER E ++ L++ V+ +VE
Sbjct: 153 RKGIYEIYSLALVTWRDCLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELG 212
Query: 119 ----------------------HMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKER 156
L DT +Y+R ST ++ ++P +YM+KAE L +E+
Sbjct: 213 LNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQ 272
Query: 157 DRVSRYLQSNGEEKLVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRT 216
RV YL + +++L K + L+ + LE + L +K +DL RMY
Sbjct: 273 RRVQVYLHESTQDELARKCEQVLIEKH----LEIFHTEFQNLLDADKNEDLGRMYNLVSR 328
Query: 217 IRAG----------------------------------------PHDNYMEYVTNCFMDH 236
I+ G H Y V + F +
Sbjct: 329 IQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNND 388
Query: 237 SLFQRALKEAFKIFCNKTV------GGFSSSEQLATFCDNILKKSGNEKLSDEA-IEETL 289
+ F AL +A F N S E LA +CD++LKKS K +EA +E+TL
Sbjct: 389 AGFVAALDKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKSS--KNPEEAELEDTL 446
Query: 290 EKVVKVLVYISDKDLFAEFYRKKLARRLLFDRSRT-------LAR-KNQTGF-------- 333
+V+ V YI DKD+F +FY K LA+RL+ S + +++ K GF
Sbjct: 447 NQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQR 506
Query: 334 ------------EKYLRYNKNAHA-GIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKC 380
E++ ++ N+ +D S+ VL++G WP +S F LPS++ +
Sbjct: 507 MFQDIGVSKDLNEQFKKHLTNSEPLDLDFSIQVLSSGSWPFQQSC----TFALPSELERS 562
Query: 381 VEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSY 440
+ F FY ++ RKL+W+Y L + + L ST+ AIL +N + +
Sbjct: 563 YQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYTV 622
Query: 441 SQVITQLNLTHDDLVRLLHSLSILYYKILIKEPDTKSISRSDY----------------- 483
Q+ + D L ++L L L K+L+ E + ++ +
Sbjct: 623 QQLTDSTQIKMDILAQVLQIL--LKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKL 680
Query: 484 -FELNSKFTDRMRGSRSLSHH--------------------RKVLGHQQLVSECIELLGR 522
+N + + +H RKVL HQQL+ E + L
Sbjct: 681 RVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSS 740
Query: 523 MFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
FKP V KK I+ LI ++YLER +T+
Sbjct: 741 RFKPRVPVIKKCIDILIEKEYLERVDGEKDTY 772
>sp|O60999|CUL1_DICDI Cullin-1 OS=Dictyostelium discoideum GN=culA PE=1 SV=1
Length = 770
Score = 155 bits (392), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 159/614 (25%), Positives = 249/614 (40%), Gaps = 151/614 (24%)
Query: 74 FGLACFRDLVYDALKHKAKDAVID----EREREQVDRALLANVLDIFV------------ 117
L +RD ++ LK + ++++D ER Q++ L+ V++ +V
Sbjct: 155 LSLVIWRDCLFTPLKQRLTNSLLDIIESERNGYQINTHLIKGVINGYVSLGLNREKPKET 214
Query: 118 ----------EHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNG 167
E L T +YY+ S +I ++ DYM+K E L +E RV +YL N
Sbjct: 215 ILQVYKSGFEELFLTATENYYTNESAKFISENSVADYMKKVETRLNEEVKRVQQYLHQNT 274
Query: 168 EEKLVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAGPH----- 222
E +L+ K + L+ + + + Q+ L +K+ DL+RMY I G
Sbjct: 275 ESELIAKCEKVLIEKHVEVIWNEFQT----LLEKDKIPDLTRMYSLLSRIPRGLEPLRTT 330
Query: 223 -----------------------------------DNYMEYVTNCFMDHSLFQRALKEAF 247
Y E VT F + F +L +A
Sbjct: 331 LEKHVQNVGLQAVSSIATNGVIEPKVYIETLLKVFKKYNELVTGAFRSDTGFVASLDKAC 390
Query: 248 KIFCNK---TVGGFSSS---EQLATFCDNILKKSGNEKLSDEAIEETLEKVVKVLVYISD 301
+ F N+ T+ SSS E LA F D +LKKS N E +E+ L V+ V YI D
Sbjct: 391 RRFINENAVTIAAKSSSKSPELLARFTDFLLKKSPNNPEESE-MEQLLNDVMIVFKYIED 449
Query: 302 KDLFAEFYRKKLARRLLFDRSRT-------------------------------LARKNQ 330
KD+F +FY K LA+RL+ S + L+R+
Sbjct: 450 KDVFQDFYSKMLAKRLIHGTSTSEDLEGTMIGKLKSTCGYEYTSKLQRMFTDMSLSRELL 509
Query: 331 TGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYET 390
F ++ + + ID SV VLATG WP S F++P ++ C ++F++FY+
Sbjct: 510 DRFNNHIEQVERSSLNIDFSVLVLATGSWPLQPPST---NFSIPKELQACEQLFQKFYQN 566
Query: 391 KTKHRKLSWIYSLGQCHINAKF---ELKNIELIISTYHAAILDLFNASNRLSYSQVITQL 447
+ RKL+W++ L + + K+ L STY +L FN L+ ++
Sbjct: 567 QHSGRKLNWLHHLSKGELKTKYLQTSKSGYTLQCSTYQIGVLLQFNQYETLTSEEIQEST 626
Query: 448 NLTHDDLVRLLHSLSILYYKILIKEP--DTKSISRSDYFELNSKFTDR------------ 493
L L L SL+ KIL+ +P D + I+++ F LN +F ++
Sbjct: 627 QLIDSVLKGTLTSLA--KSKILLADPPLDDEEIAKTTKFSLNKQFKNKKTKIFINVPVLT 684
Query: 494 ------------MRGSRSLS---------HHRKVLGHQQLVSECIELLGRMFKPAVKAFK 532
+ R L RK L H L++E I L F P V K
Sbjct: 685 QVKEEIDSIHKTVEEDRKLQIQAAIVRIMKMRKQLAHSGLMTEVISQLQTRFNPKVNIIK 744
Query: 533 KRIEGLISQDYLER 546
K I+ LI ++YL R
Sbjct: 745 KCIDILIEKEYLMR 758
>sp|Q9D4H8|CUL2_MOUSE Cullin-2 OS=Mus musculus GN=Cul2 PE=1 SV=2
Length = 745
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 134/537 (24%), Positives = 227/537 (42%), Gaps = 114/537 (21%)
Query: 115 IFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEK 174
IFV L +T YY + ++N + + C YM K LK E R +YL + K++ +
Sbjct: 206 IFVSPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKVIHE 265
Query: 175 VQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG-PH----------D 223
Q ++ + Q L E C ++ + + +D++ MY R + +G PH D
Sbjct: 266 CQQRMVADH-LQFLHSE---CHSIIQQERKNDMANMYVLLRAVSSGLPHMIEELQKHIHD 321
Query: 224 NYMEYVTNCFMDH--SLFQRALKEA---FKIFCNKTVGG---FSSS-------------- 261
+ +N +H +LF ++ E F N + G F S+
Sbjct: 322 EGLRATSNLTQEHMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVNYREP 381
Query: 262 -------EQLATFCDNILKKSGNEKLSDEAIEETLEKVVKVLVYISDKDLFAEFYRKKLA 314
E LA +CDN+LKKS + +++ +E+ L + V YI DKD+F +FY + LA
Sbjct: 382 KSVCKAPELLAKYCDNLLKKSA-KGMTENEVEDKLTSFITVFKYIDDKDVFQKFYARMLA 440
Query: 315 RRLLFDRSRTLAR--------KNQTGFE--------------------KYLRYNKNAHAG 346
+RL+ S ++ K G+E K+ + +N
Sbjct: 441 KRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNNFIRNQDTV 500
Query: 347 IDLSVT----VLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYS 402
IDL ++ VL G WP ++ + F +P ++ K V++F+ FY RKL+W++
Sbjct: 501 IDLGISFQIYVLQAGAWPLTQAP--SSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHY 558
Query: 403 LGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLS 462
L + + K +++TY A+L FN S +SY ++ + +L + + SL
Sbjct: 559 LCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSL- 617
Query: 463 ILYYKILIKEPDTKSISRSDYFELNSKFTDR-----------------MRGSRS------ 499
L K++ + + + I F LN F+ + + +RS
Sbjct: 618 -LDVKMINHDSEKEDIDAESSFSLNMSFSSKRTKFKITTSMQKDTPQELEQTRSAVDEDR 676
Query: 500 ----------LSHHRKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLER 546
+ RKVL H L+ E I F P++ KK IE LI + Y+ER
Sbjct: 677 KMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIER 733
>sp|Q5RCF3|CUL2_PONAB Cullin-2 OS=Pongo abelii GN=CUL2 PE=2 SV=1
Length = 745
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 134/538 (24%), Positives = 222/538 (41%), Gaps = 114/538 (21%)
Query: 114 DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVE 173
+IF L +T YY + ++N + + C YM K LK E R +YL + K++
Sbjct: 205 EIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKVIH 264
Query: 174 KVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG-PH---------- 222
+ Q ++ + Q L E C + R K +D++ MY R + G PH
Sbjct: 265 ECQQRMVADH-LQFLHAE---CHNIIRQEKKNDMANMYVLLRAVSTGLPHMIQELQNHIH 320
Query: 223 DNYMEYVTNCFMDH--SLFQRALKEA---FKIFCNKTVGG---FSSS------------- 261
D + +N ++ +LF ++ E F N + G F S+
Sbjct: 321 DEGLRATSNLTQENMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVNYRE 380
Query: 262 --------EQLATFCDNILKKSGNEKLSDEAIEETLEKVVKVLVYISDKDLFAEFYRKKL 313
E LA +CDN+LKKS + +++ +E+ L + V YI DKD+F +FY + L
Sbjct: 381 PKSVCKAPELLAKYCDNLLKKSA-KGMTENEVEDRLTSFITVFKYIDDKDVFQKFYARML 439
Query: 314 ARRLLFDRSRTLAR--------KNQTGFE-------KYLRYNKNAHA------------- 345
A+RL+ S ++ K G+E Y + +A
Sbjct: 440 AKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNNFIKNQDT 499
Query: 346 ----GIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIY 401
GI + VL G WP ++ + F +P ++ K V++F+ FY RKL+W++
Sbjct: 500 VIDLGISFQIYVLQAGAWPLTQAP--SSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLH 557
Query: 402 SLGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSL 461
L + + K +++TY A+L FN S +SY ++ + +L + + SL
Sbjct: 558 YLCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSL 617
Query: 462 SILYYKILIKEPDTKSISRSDYFELNSKFTDR-----------------MRGSRS----- 499
L K++ + + + I F LN F+ + M +RS
Sbjct: 618 --LDVKMINHDSEKEDIDAESSFSLNMNFSSKRTKFKITTSMQKDTPQEMEQTRSAVDED 675
Query: 500 -----------LSHHRKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLER 546
+ RKVL H L+ E I F P++ KK IE LI + Y+ER
Sbjct: 676 RKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIER 733
>sp|Q13617|CUL2_HUMAN Cullin-2 OS=Homo sapiens GN=CUL2 PE=1 SV=2
Length = 745
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 134/538 (24%), Positives = 222/538 (41%), Gaps = 114/538 (21%)
Query: 114 DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVE 173
+IF L +T YY + ++N + + C YM K LK E R +YL + K++
Sbjct: 205 EIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKVIH 264
Query: 174 KVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG-PH---------- 222
+ Q ++ + Q L E C + R K +D++ MY R + G PH
Sbjct: 265 ECQQRMVADH-LQFLHAE---CHNIIRQEKKNDMANMYVLLRAVSTGLPHMIQELQNHIH 320
Query: 223 DNYMEYVTNCFMDH--SLFQRALKEA---FKIFCNKTVGG---FSSS------------- 261
D + +N ++ +LF ++ E F N + G F S+
Sbjct: 321 DEGLRATSNLTQENMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVNYRE 380
Query: 262 --------EQLATFCDNILKKSGNEKLSDEAIEETLEKVVKVLVYISDKDLFAEFYRKKL 313
E LA +CDN+LKKS + +++ +E+ L + V YI DKD+F +FY + L
Sbjct: 381 PKSVCKAPELLAKYCDNLLKKSA-KGMTENEVEDRLTSFITVFKYIDDKDVFQKFYARML 439
Query: 314 ARRLLFDRSRTLAR--------KNQTGFE-------KYLRYNKNAHA------------- 345
A+RL+ S ++ K G+E Y + +A
Sbjct: 440 AKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNNFIKNQDT 499
Query: 346 ----GIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIY 401
GI + VL G WP ++ + F +P ++ K V++F+ FY RKL+W++
Sbjct: 500 VIDLGISFQIYVLQAGAWPLTQAP--SSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLH 557
Query: 402 SLGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSL 461
L + + K +++TY A+L FN S +SY ++ + +L + + SL
Sbjct: 558 YLCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSL 617
Query: 462 SILYYKILIKEPDTKSISRSDYFELNSKFTDR-----------------MRGSRS----- 499
L K++ + + + I F LN F+ + M +RS
Sbjct: 618 --LDVKMINHDSEKEDIDAESSFSLNMNFSSKRTKFKITTSMQKDTPQEMEQTRSAVDED 675
Query: 500 -----------LSHHRKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLER 546
+ RKVL H L+ E I F P++ KK IE LI + Y+ER
Sbjct: 676 RKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIER 733
>sp|Q9XZJ3|CUL2_DICDI Cullin-2 OS=Dictyostelium discoideum GN=culB PE=2 SV=1
Length = 771
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 193/433 (44%), Gaps = 85/433 (19%)
Query: 121 LQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKVQHELL 180
L++T +Y+R S +I YM+KAE + +E R +YL S+ +K+ ++ H +L
Sbjct: 203 LENTRQFYTRESVAFIASSGISSYMKKAETRIDEEEQRSQKYLNSSSHDKM-RRLLHSIL 261
Query: 181 VVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG-------------------- 220
+ +LL QS C + K+D++ MY+ I G
Sbjct: 262 IEKHKELL---QSECINYLKDEKLDEIYNMYKLLSRIEGGLAPVLETVQKYIQHVGIDAI 318
Query: 221 ---PHDNYME---YVTNCFMDHSLFQRALKEAFK----------IFCNK-------TVGG 257
P N + YV + F +K++F + C+K T
Sbjct: 319 KSIPDRNNPDPKIYVETLLKIYLQFSSIIKKSFNNDVSFITVLDLACHKIFNQNHITRNT 378
Query: 258 FSSSEQLATFCDNILKKSGNEKLSDEAIEETLEKVVKVLVYISDKDLFAEFYRKKLARRL 317
S E LA +CD +LKK GN++ + +EE L +++ + Y+ DKD+F +FY K L+RRL
Sbjct: 379 TKSPELLAKYCDMLLKK-GNKQHEEIELEEKLGQIIVLFKYVDDKDVFQKFYSKMLSRRL 437
Query: 318 L----------------------------FDR---SRTLARKNQTGFEKYLRYNKNAHAG 346
+ F R TL+ + F+ +L N +
Sbjct: 438 INGTSVSDDIEKFMITGLKQACGFEYTSKFQRMFNDITLSAETNEEFKNHLIKNSLSIGK 497
Query: 347 IDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQC 406
ID S+ VL +G W + + F +P ++ C+ F+++Y T+ + RKL+W++ L +
Sbjct: 498 IDFSILVLTSGSWSLHSQT---SSFIVPQELTLCISAFQQYYSTQHQGRKLNWLHHLCKA 554
Query: 407 HINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSILYY 466
+ F K+ + ++ + IL +FN +S ++ NL ++L R L SL +
Sbjct: 555 EAKSFFAKKSYDFQVTNFQLGILLIFNTQESVSLEEITKFTNLNENELSRTLQSL--IEA 612
Query: 467 KILI-KEPDTKSI 478
KILI K+ D SI
Sbjct: 613 KILISKKKDQNSI 625
Score = 34.7 bits (78), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 504 RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLER 546
RK + H L+ E IE F+P + KK IE LI ++Y+ R
Sbjct: 717 RKTMNHVSLIQEVIEHSRLRFQPNIPMIKKCIEQLIEKEYITR 759
>sp|Q54CS2|CUL4_DICDI Cullin-4 OS=Dictyostelium discoideum GN=culD PE=3 SV=1
Length = 802
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 144/594 (24%), Positives = 242/594 (40%), Gaps = 154/594 (25%)
Query: 98 EREREQVDRALL---------ANVLDIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKA 148
ERE +++DR L+ N+ F +++T+ +Y + I + P Y++
Sbjct: 214 EREGDEIDRDLIHSLVKMLSSLNIYTKFEIEFIKETNRFYDMEGNSKINEIETPMYLKYV 273
Query: 149 EECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLS 208
E L +E +R+ RYL+ + +++L+ + +L+ + +LEK G A+ G++++DL
Sbjct: 274 CERLNQEGERLMRYLEQSTKKQLMAVLDRQLIERHVDVILEK---GFNAMVNGDRLEDLG 330
Query: 209 RMYRFYRTI---------------------------RAGPHDNYMEY-------VTNCFM 234
++Y+ ++ A + ++Y ++ F
Sbjct: 331 KLYQLLNSVGEIKKIKESWQSYIKQTGIQMLNDKEKEATLIQDLLDYKDRLDRILSQSFS 390
Query: 235 DHSLFQRALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSGNEKLSDEAIEETLEKVVK 294
+ L ALKE+F+ F N +E +A F D+ LK G +++S+E +E L K +
Sbjct: 391 KNELLTYALKESFEYFINTKQN--KPAELVARFIDSKLK-VGGKRMSEEELETVLNKSLI 447
Query: 295 VLVYISDKDLFAEFYRKKLARRLLFDRS------------------RTLARKNQTGFEKY 336
+ YI KD+F FY++ L++RLL D+S T K + F+
Sbjct: 448 LFRYIQGKDVFEAFYKQDLSKRLLLDKSTSIDAEKSMISKLKTECGTTFTAKLEEMFKDI 507
Query: 337 LRYNKNAHA-----------GIDLSVTVLATGFWPSYKSSDLNPI-FNLPSQMIKCVEVF 384
N ++ I++++ VL +G WP PI LP + ++ EVF
Sbjct: 508 ELSNDIMNSFRDSPMTQNFKSIEMNIYVLTSGNWPIQP-----PIEATLPKEFLEYQEVF 562
Query: 385 KRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFN---ASNRLSYS 441
+FY +K + L W +L C + A F EL +S + IL LFN LS+
Sbjct: 563 NKFYLSKHNGKTLKWQNALSYCVLKANFIQGKKELSVSLFQTIILYLFNDVIDGGELSFR 622
Query: 442 QVITQLNLTHDDLVRLLHSLSILYYKILIKEP---------------------------- 473
+ L +L + L SL ILI++
Sbjct: 623 DIQANTGLAIPELKKNLLSLCSSKSDILIQKKSSTSSNTSSNTSSNTSSSASGSASGGAS 682
Query: 474 ----DTKSISRSDYFELNSKFTDRMRGSR------------------------------- 498
TK I +D F NSKF+ ++ +
Sbjct: 683 GGATKTKVIDETDTFLFNSKFSSKLFKIKVNSIQIQETVEENQKTNENIISDRQYQVDAA 742
Query: 499 --SLSHHRKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPEN 550
+ RK L H L+SE + LL F+P KKRIE LI ++YL R PEN
Sbjct: 743 IVRIMKTRKTLAHNLLISELVSLLK--FQPKPVDLKKRIEILIEKEYLCRDPEN 794
>sp|Q17389|CUL1_CAEEL Cullin-1 OS=Caenorhabditis elegans GN=cul-1 PE=1 SV=1
Length = 780
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 137/558 (24%), Positives = 224/558 (40%), Gaps = 134/558 (24%)
Query: 109 LANVLDIFVEHMLQDTSSYYSRISTNWILKDP-CPDYMRKAEECLKKERDRVSRYLQSNG 167
LA + F L+ T +Y++ + N++ DYM K E L +E DR YL S+
Sbjct: 225 LAVYKEFFEVKFLEATRGFYTQEAANFLSNGGNVTDYMIKVETRLNQEDDRCQLYLNSST 284
Query: 168 EEKLVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG------- 220
+ L + L+ + L+ Q G L + DDLSRM++ + G
Sbjct: 285 KTPLATCCESVLI----SNQLDFLQRHFGGLLVDKRDDDLSRMFKLCDRVPNGLDELRKS 340
Query: 221 ---------------------------------PHDNYMEYVTNCFMDHSLFQRALKEAF 247
H+ Y V F + F ++L +A
Sbjct: 341 LENHIAKEGHQALERVAMEAATDAKLYVKTLLEVHERYQSLVNRSFKNEPGFMQSLDKAA 400
Query: 248 KIFCNKTVGG---------FSSSEQLATFCDNILKKSGNEKLSDEA-IEETLEKVVKVLV 297
F N S+E LA +CD +L+KS K+ DEA +EE K++ V
Sbjct: 401 TSFINNNAVTKRAPPQAQLTKSAELLARYCDQLLRKSS--KMPDEAELEELQTKIMVVFK 458
Query: 298 YISDKDLFAEFYRKKLARRLLFDRSRT--------LARKNQTGFEKYLRYNKN------- 342
YI DKD+F++FY K ++RL+ + S + K+ G+E R +K
Sbjct: 459 YIDDKDVFSKFYTKMFSKRLISELSASDEAEANFITKLKSMCGYEYTARLSKMVNDTQVS 518
Query: 343 ---------------AHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRF 387
++ +V VL++G WP++ ++ PI LP Q+ K +E+F +F
Sbjct: 519 KDLTADFKEKKADMLGQKSVEFNVLVLSSGSWPTFPTT---PI-TLPQQLSKTIEIFGQF 574
Query: 388 YETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQL 447
Y K R+L+W+YS + I + K +T + LFN + + Q+
Sbjct: 575 YNEKFNGRRLTWVYSQSRGEITSTAFPKKYVFTATTAQMCTMLLFNEQDSYTVEQIAAAT 634
Query: 448 NLTHDDLVRLLHSLSILYYKILIKEPDTK-----SISRSDYFELN------------SKF 490
+ ++ SL K L+ + DT+ + + LN SKF
Sbjct: 635 KMDEKSAPAIVGSL----IKNLVLKADTELQKEDEVPMTATVSLNKAYMNKKVRVDLSKF 690
Query: 491 T---DRMRGSRSLSHH-------------------RKVLGHQQLVSECIELLGRMFKPAV 528
T D +R + ++ + RK + HQQL++E I L FKP V
Sbjct: 691 TMKQDAVRDTENVQKNVEEDRKSVISACIVRIMKTRKRVQHQQLMTEVITQLSGRFKPKV 750
Query: 529 KAFKKRIEGLISQDYLER 546
+ K+ I LI ++Y+ R
Sbjct: 751 EMIKRCIGSLIEKEYMLR 768
>sp|Q17391|CUL3_CAEEL Cullin-3 OS=Caenorhabditis elegans GN=cul-3 PE=1 SV=2
Length = 777
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 137/574 (23%), Positives = 236/574 (41%), Gaps = 150/574 (26%)
Query: 114 DIFVEHMLQDTSSYYSRISTNWIL--KDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKL 171
D F +L++TS YY + NW+ D C Y+ + E + E R SRYL E K+
Sbjct: 201 DEFERPLLKETSDYYRDVCKNWLSGDNDACF-YLAQVEIAMHDEASRASRYLDKMTEAKI 259
Query: 172 VEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYR------TIRAGP---- 221
++ + ++ + ++ + G + K++DL+R++R ++ T+ G
Sbjct: 260 LQVMDDVMVAEHIQTIVYMQNGGVKFMLEHKKIEDLTRIFRIFKRIGDSVTVPGGGLKAL 319
Query: 222 -----------------------------------HDNYMEYVTNCFMDHSLFQRALKEA 246
D + +T F D F+ +
Sbjct: 320 LKAVSEYLNETGSNIVKNEDLLKNPVNFVNELLQLKDYFSSLLTTAFADDRDFKNRFQHD 379
Query: 247 FKIFCNKTVGGFSSSEQLATFCDNILKKSGNEKLSDEAIEETLEKVVKVLVYISDKDLFA 306
F+ F N S E +A + D++L+ SG + +SD ++ L+ V+ + Y+ +KD+F
Sbjct: 380 FETFLN---SNRQSPEFVALYMDDMLR-SGLKCVSDAEMDNKLDNVMILFRYLQEKDVFE 435
Query: 307 EFYRKKLARRLLFDRSRT-------LAR-KNQTG--FEKYL------------------- 337
+++++ LA+RLL D+S + LA+ K + G F + L
Sbjct: 436 KYFKQYLAKRLLLDKSCSDDVEKALLAKLKTECGCQFTQKLENMFRDKELWLTLATSFRD 495
Query: 338 -RYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHRK 396
R + ID+S+ VL G WP+ + NP+ LP ++ E+F ++Y K RK
Sbjct: 496 WREAQPTKMSIDISLRVLTAGVWPTVQC---NPVV-LPQELSVAYEMFTQYYTEKHTGRK 551
Query: 397 LSWIYSLGQCHINAKF------ELKNIE---------------------LIISTYHAAIL 429
L+ LG + A F + N E L ++T+ IL
Sbjct: 552 LTINTLLGNADVKATFYPPPKASMSNEENGPGPSSSGESMKERKPEHKILQVNTHQMIIL 611
Query: 430 DLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSI--LYYKILIKEPDTK-SISRSDYFEL 486
FN NR+S Q++ +L + +L R L SL++ +IL+++ K +I SD F +
Sbjct: 612 LQFNHHNRISCQQLMDELKIPERELKRNLQSLALGKASQRILVRKNKGKDAIDMSDEFAV 671
Query: 487 NSKFTDRM------------------RGSRS----------------LSHHRKVLGHQQL 512
N F ++ R +R + RK L H L
Sbjct: 672 NDNFQSKLTRVKVQMVTGKVESEPEIRETRQKVEDDRKLEVEAAIVRIMKARKKLNHNNL 731
Query: 513 VSECIELLGRMFKPAVKAFKKRIEGLISQDYLER 546
V+E + L F P+ K+RIE LI ++YL R
Sbjct: 732 VAEVTQQLRHRFMPSPIIIKQRIETLIEREYLAR 765
>sp|Q24311|CUL1_DROME Cullin homolog 1 OS=Drosophila melanogaster GN=lin19 PE=1 SV=2
Length = 774
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 147/626 (23%), Positives = 244/626 (38%), Gaps = 153/626 (24%)
Query: 74 FGLACFRDLVYDALKHKAKDAVI----DEREREQVDRALLANVLDIFVE----------- 118
L ++ ++ L AV+ +ER+ + ++R+L+ +V++ +VE
Sbjct: 153 LALVAWKGHLFQVLNEPVTKAVLKSIEEERQGKLINRSLVRDVIECYVELSFNEEDTDAE 212
Query: 119 -------------HMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQS 165
+ DTS++Y + S ++ + +Y++ E L++E RV +
Sbjct: 213 QQKLSVYKQNFENKFIADTSAFYEKESDAFLSTNTVTEYLKHVENRLEEETQRVRGFNSK 272
Query: 166 NGEEKLVEKVQHELLVVYATQLLEKE----QSGCGALFRGNKVDDLSRMY---------- 211
NG L E L L+EK + L ++ DDL RMY
Sbjct: 273 NGLSYLHETTADVLKSTCEEVLIEKHLKIFHTEFQNLLNADRNDDLKRMYSLVALSSKNL 332
Query: 212 -------------------------------RFYRTIRAGPHDNYMEYVTNCFMDHSLFQ 240
+ Y H Y V F + + F
Sbjct: 333 TDLKSILENHILHQGTEAIAKCCTTDAANDPKTYVQTILDVHKKYNALVLTAFNNDNGFV 392
Query: 241 RALKEAFKIFCNKTVGGFSSS-----EQLATFCDNILKKSGNEKLSDEAIEETLEKVVKV 295
AL +A F N V ++S E LA +CD +LKKS D+ +E+ L +V+ V
Sbjct: 393 AALDKACGKFINSNVVTIANSASKSPELLAKYCDLLLKKSSKNP-EDKELEDNLNQVMVV 451
Query: 296 LVYISDKDLFAEFYRKKLARRLLFDRSRT-------LARKNQTG---------------- 332
YI DKD+F ++Y K LA+RL+ S + +++ QT
Sbjct: 452 FKYIEDKDVFQKYYSKMLAKRLVNHTSASDDAEAMMISKLKQTCGYEYTVKLQRMFQDIG 511
Query: 333 --------FEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVF 384
F++YL KN ID + VL++G WP S++ F LPS++ + V F
Sbjct: 512 VSKDLNSYFKQYLA-EKNLTMEIDFGIEVLSSGSWPFQLSNN----FLLPSELERSVRQF 566
Query: 385 KRFYETKTKHRKLSWIYSL--GQCHINA-KFELKNIELIISTYHAAILDLFNASNRLSYS 441
FY + RKL+W+Y + G+ +N + L ST+ ++L FN +
Sbjct: 567 NEFYAARHSGRKLNWLYQMCKGELIMNVNRNNSSTYTLQASTFQMSVLLQFNDQLSFTVQ 626
Query: 442 QVITQLNLTHDDLVRLLHSLSILYYKILIKEPDTKSISRSDYFEL-------------NS 488
Q+ ++L+++L L L K+L + S++ EL N
Sbjct: 627 QLQDNTQTQQENLIQVLQIL--LKAKVLTSSDNENSLTPESTVELFLDYKNKKRRININQ 684
Query: 489 KFTDRMRGSRSLSHH--------------------RKVLGHQQLVSECIELLGRMFKPAV 528
++ + H RK L H L+SE + L FKP V
Sbjct: 685 PLKTELKVEQETVHKHIEEDRKLLIQAAIVRIMKMRKRLNHTNLISEVLNQLSTRFKPKV 744
Query: 529 KAFKKRIEGLISQDYLERYPENPNTF 554
KK I+ LI ++YLER + +T+
Sbjct: 745 PVIKKCIDILIEKEYLERMEGHKDTY 770
>sp|Q09760|CUL3_SCHPO Cullin-3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=cul3 PE=1 SV=2
Length = 785
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 178/380 (46%), Gaps = 79/380 (20%)
Query: 242 ALKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSGNEKLSDEAIEETLEKVVKVLVYISD 301
+L +AF F + G + E ++ F D+ LKK + + + +IE TL+ V + +IS+
Sbjct: 406 SLSDAFVTFVD---GYTRAPEYISLFIDDNLKKDARKAI-EGSIEATLQNSVTLFRFISE 461
Query: 302 KDLFAEFYRKKLARRLLFDRSRT-------LAR-KNQTG--FEKYL-------------- 337
KD+F ++Y+ LA+RLL +RS + ++R K + G F + L
Sbjct: 462 KDVFEKYYKTHLAKRLLNNRSISSDAELGMISRLKQEAGNVFTQKLEGMFNDMNLSQELL 521
Query: 338 ---RYN---KNAHAGIDLSVTVLATGFWPSYKSSDLNP---IFNLPSQMIKCVEVFKRFY 388
++N ++A +DL+V++LA+ FWP DL+P N P ++ ++ F FY
Sbjct: 522 QEYKHNSALQSAKPALDLNVSILASTFWP----IDLSPHKIKCNFPKVLLAQIDQFTDFY 577
Query: 389 ETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFN---ASNRLSYSQVIT 445
+K RKL W S+G + F+ + +L +ST + IL LF + L + +++
Sbjct: 578 LSKHTGRKLLWYPSMGSADVRVNFKDRKYDLNVSTIASVILLLFQDLKENQCLIFEEILE 637
Query: 446 QLNLTHDDLVRLLHSLSILYYKILIKEPDTKSISRSDYFELNSKFTDRM----------- 494
+ N+ DL R L SL+ YKIL+K+P + ++ D F N F +
Sbjct: 638 KTNIEVGDLKRNLQSLACAKYKILLKDPKGREVNAGDKFYFNENFVSNLARIKISTVAQT 697
Query: 495 -------------RGSRSLSHH-----------RKVLGHQQLVSECIELLGRMFKPAVKA 530
+ S H RKV H QL++E L F P+
Sbjct: 698 RVEDDSERKRTLEKVDESRKHQADACIVRVMKDRKVCEHNQLMAEVTRQLNPRFHPSPMM 757
Query: 531 FKKRIEGLISQDYLERYPEN 550
K+RIE LI ++YL+R +N
Sbjct: 758 IKRRIEALIEREYLQRQADN 777
>sp|O13790|CUL1_SCHPO Cullin-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=cul1 PE=1 SV=1
Length = 767
Score = 126 bits (316), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 133/545 (24%), Positives = 228/545 (41%), Gaps = 126/545 (23%)
Query: 116 FVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKV 175
F + +++T ++Y++ S+ ++ DY++KAE L +E + V YL + + L+E
Sbjct: 225 FETNFIENTKNFYAKESSEYLASHSITDYLKKAEIRLAEEEELVRLYLHESTLKPLLEAT 284
Query: 176 QHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYR----------------------- 212
+ ++L+ ++L + + N +D+ RMYR
Sbjct: 285 E-DVLIAQHEEVLHND---FARMLDQNCSEDIIRMYRLMSRTPNGLQPLRQTFEEFVKRS 340
Query: 213 -FYRTIRAGPH---------DNYMEY-----------VTNCFMDHSLFQRALKEAFKIFC 251
F + P YME V F + F ++L AF+
Sbjct: 341 GFAAVAKIVPQVGGEADVDPKEYMEMLLSTYKASKELVNTAFHGDTDFTKSLDTAFRELV 400
Query: 252 NKTV----GGFSSSEQLATFCDNILKKSGNEKLSDEAIEETLEKVVKVLVYISDKDLFAE 307
N+ V S E LA + D+IL+KS N+ + + +E+ L ++ + Y+ DKD+F
Sbjct: 401 NRNVVCQRSSSRSPELLAKYADSILRKS-NKNVDIDDVEDCLSSIIIIFRYVEDKDVFQN 459
Query: 308 FYRKKLARRLL----------------------FDRSRTLARK------NQTGFEKYLRY 339
FY K LA+RL+ F+ + L R +Q E + +
Sbjct: 460 FYTKLLAKRLVNGTSNSQDAESSMLSKLKEVCGFEYTSKLQRMFQDISLSQEITEAFWQL 519
Query: 340 NKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSW 399
++ ID S VL T FWP S N F+LP +++ E F+ +Y + RKLSW
Sbjct: 520 PQSRAGNIDFSALVLGTSFWP---LSPNNVNFHLPEELVPLYEGFQNYYYSCHNGRKLSW 576
Query: 400 IYSLGQCHINAKFELK-NIELI--ISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLVR 456
++ L + I A+ + N+ + +STY +L L+N + +Y ++ L+ D L
Sbjct: 577 LFHLSKGEIKARINPQTNVTYVFQVSTYQMGVLLLYNHRDSYTYEELAKITGLSTDFLTG 636
Query: 457 LLHSLSILYYKILIKEPDTKSISRSDYFELNSKFTDRMRGSR--------------SLSH 502
+L+ L K+L+ + K + +++N F RM+ R SL
Sbjct: 637 ILNIF--LKAKVLLLGDNDKLGDPNSTYKINENF--RMKKIRVQLNLPIRSEQKQESLET 692
Query: 503 H---------------------RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQ 541
H R+ L H LV E I+ + F P V K+ I+ LI +
Sbjct: 693 HKTIEEDRKLLLQSAIVRIMKARRTLKHVVLVKETIDQIKSRFTPKVSDIKQCIDMLIEK 752
Query: 542 DYLER 546
+YLER
Sbjct: 753 EYLER 757
>sp|Q17390|CUL2_CAEEL Cullin-2 OS=Caenorhabditis elegans GN=cul-2 PE=1 SV=3
Length = 850
Score = 125 bits (314), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 137/573 (23%), Positives = 224/573 (39%), Gaps = 120/573 (20%)
Query: 93 DAVIDEREREQVDRALLANVLDIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECL 152
D V E R + + A + F + +L DT YYS ++ + C +YM + L
Sbjct: 276 DVVPAEGARYKARESTTAFYQESFEKPLLTDTEQYYSALAQKMLTDLSCSEYMEQVIVLL 335
Query: 153 KKERDRVSRYLQSNGEEKLVEKVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYR 212
++E R +YL + EK++ Q ++ + +L + C L + DL MYR
Sbjct: 336 EQEEMRAKKYLHESSVEKVITLCQKVMIKAHKDKL----HAVCHDLITNEENKDLRNMYR 391
Query: 213 FYRTIRAGPH---DNYMEYV-----------------------------------TNCFM 234
+ I+AG + EYV T FM
Sbjct: 392 LLKPIQAGLSVMVKEFEEYVKKKGLEAVSRLTGENVPQQFVENVLRVYNKFNDMKTAVFM 451
Query: 235 DHSLFQRALKEAFKIFCNKTVGGFS---SSEQLATFCDNILKKSGNEKLSDEAIEETLEK 291
D F L +A + N G S +SE+LA + D +LKKS + LS+ +E L+
Sbjct: 452 DDGEFSSGLDKALQGVVNSKEPGQSVPKASERLARYTDGLLKKS-TKGLSETDLEAKLDS 510
Query: 292 VVKVLVYISDKDLFAEFYRKKLARRLLFDRSRT--------------------------- 324
+ + YI DKD+F +FY K LA RL+ S +
Sbjct: 511 AIVIFRYIEDKDIFQKFYSKMLANRLIASTSISMDAEELMINKLKQACGYEFTSKLSRMF 570
Query: 325 ----LARKNQTGFEKYLRYNKNAHAGIDLSVT---VLATGFWP----------SYKSSDL 367
L+++ F+K++ K + T +L G WP + +++
Sbjct: 571 TDIGLSQELSNNFDKHIADIKTVQPDVKFVPTQTMILQAGSWPLNAPQLSTNSNNQTAQD 630
Query: 368 NPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAA 427
F+LP + ++ F++FY K RKL+W++++ Q + + K + Y A
Sbjct: 631 VANFHLPRILQPVIQEFEKFYTGKHNGRKLTWLFNMSQGDVRLTYLDKQYVAQMYVYQMA 690
Query: 428 ILDLFNASNRLSYSQV--------------------ITQL-----NLTHDDLVRLLHSLS 462
L F + + + +T L NLT D LVRL S++
Sbjct: 691 ALLCFERRDAILVKDIGEEIGVSGDYLLKTIRTILDVTLLTCDDQNLTADSLVRLNMSMT 750
Query: 463 ILYYKILIKEPDT-KSISRSDYFELNSKFTDRMR----GSRSLSHHRKVLGHQQLVSECI 517
K ++ P K++ + N+ DR + RKVL H LV+E +
Sbjct: 751 SKRMKFRLQAPQVNKAVEKEQEAVANTVSQDRKYYMECAIVRIMKTRKVLKHNALVTEIM 810
Query: 518 ELLGRMFKPAVKAFKKRIEGLISQDYLERYPEN 550
+ F P V KK IE LI + Y++R +N
Sbjct: 811 DQTKGRFSPDVPFIKKSIEDLIEKMYIQRTDQN 843
>sp|O14122|CUL4_SCHPO Cullin-4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=cul4 PE=1 SV=1
Length = 734
Score = 122 bits (306), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 165/384 (42%), Gaps = 71/384 (18%)
Query: 229 VTNCFMDHSLFQRALKEAFKIFCNKTVGGF--SSSEQLATFCDNILKKSGNEKLSDEAIE 286
V F+ A+++AF+ F N G + + +A + D +L+ G + + ++
Sbjct: 346 VDESFLHDETLSYAMRKAFETFINGAKGSQREAPARLIAKYIDYLLR-VGEQASGGKPLK 404
Query: 287 ETLEKVVKVLVYISDKDLFAEFYRKKLARRLLFDRSRTLAR--------KNQTG------ 332
E +++ + YI+ KD+F +Y+ +A+RLL ++S + K G
Sbjct: 405 EVFSEILDLFRYIASKDIFEAYYKLDIAKRLLLNKSASAQNELMLLDMLKKTCGSQFTHS 464
Query: 333 -------------FEKYLRYNKNAH-AGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMI 378
F R++K AH DL V VL+ +WPSY S + LP M
Sbjct: 465 LEGMFRDVNISKEFTSSFRHSKAAHNLHRDLYVNVLSQAYWPSYPESHIR----LPDDMQ 520
Query: 379 KCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFN---AS 435
+ ++ F++FY +K +K+SW SLG C + A+F L N EL IS + A +L FN
Sbjct: 521 QDLDCFEKFYLSKQVGKKISWYASLGHCIVKARFPLGNKELSISLFQACVLLQFNNCLGG 580
Query: 436 NRLSYSQVITQLNLTHDDLVRLLHSLSILYYKILIKEPDTKSISRSDYFELNSKFTDRM- 494
+SY + L+ DL R L SLS + L+ P +K S F +N KFTD++
Sbjct: 581 EGISYQDLKKSTELSDIDLTRTLQSLSCARIRPLVMVPKSKKPSPDTMFYVNEKFTDKLY 640
Query: 495 ------------RGSRS--------------------LSHHRKVLGHQQLVSECIELLGR 522
R S + ++ + H LV I +
Sbjct: 641 RVKINQIYLKEERQENSDVQEQVVRDRQFELQASIVRVMKQKEKMKHDDLVQYVINNVKD 700
Query: 523 MFKPAVKAFKKRIEGLISQDYLER 546
P V K IE L+ ++YLER
Sbjct: 701 RGIPLVSDVKTAIEKLLEKEYLER 724
>sp|Q54XF7|CUL5_DICDI Cullin-5 OS=Dictyostelium discoideum GN=culE PE=3 SV=1
Length = 750
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 127/550 (23%), Positives = 232/550 (42%), Gaps = 117/550 (21%)
Query: 116 FVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKV 175
F + LQ+T ++Y S ++I K+ +YMR +++E +RV++Y+ + EKL + +
Sbjct: 197 FEQQFLQETETFYKAESADFIEKNGVCEYMRHVYNRIEQETNRVNQYMPISTLEKLTKIL 256
Query: 176 QHELLVVYATQ--------LLEKEQSGCGALF----RGNKVDDLSRMY------------ 211
+ L+ Y Q L+E + S ++ R N + L ++
Sbjct: 257 NNVLISNYKEQFASKFLDILIEDKSSDLVMMYSLLSRVNHLTPLKNIFSDFIKSEGLKEI 316
Query: 212 -----------RFYRTIRAGPHDNYMEYVTNCFMDHSLFQRALKEAFKIFCNKTVGGFSS 260
+ +I + + + C+ + + F A+ ++F I N+ +
Sbjct: 317 ESNLKEAQEKPQVLISILLKIYSRFNIMIKECYGNDTDFTTAMDKSFSILVNENPASYDP 376
Query: 261 SEQ-------LATFCDNILKKSGNEKLSDEA-IEETLEKVVKVLVYISDKDLFAEFYRKK 312
++ L+ FCD IL+K G +SDEA +E+ L + V + Y+ DKD+F Y+K
Sbjct: 377 KKKESNIPVVLSKFCDQILRK-GPHHISDEAELEKKLTEAVCLFKYLPDKDIFMLNYQKM 435
Query: 313 LARRLLFDRS-----RTLA---RKNQTGFE---KYLRYNKNAHAGIDLSVT--------- 352
L++RL+ D S TL KN GF+ K R + D+++
Sbjct: 436 LSKRLVEDLSASEDAETLMINKLKNYQGFDYCTKLTRMITDMRLCKDININFQNHLNEKS 495
Query: 353 ----------VLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYS 402
VL G W P F PS+M+ + F+ FY+ + R L+++Y
Sbjct: 496 LTLPYQFNFYVLTNGSWTLTNKQTATP-FKPPSEMLSSITYFESFYKKSYQGRVLTFLYD 554
Query: 403 LGQCHINAKFELKNI-ELIISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSL 461
+ ++++ I +L + Y AIL +FN +++++ + + L D+ L L
Sbjct: 555 FSRADVDSRQAKGKIYKLTTTAYQMAILLMFNGADKITRFLINDTIGL--DETSIRLPLL 612
Query: 462 SILYYKIL-IKEPDTKSISRSDYFELNSKF-----------------TDRMRGSRSLSHH 503
+++ I+ EP K+ + F +NSKF T + G +++S
Sbjct: 613 ALIKTGIIECSEPSFKNWNNDTEFTVNSKFSSKKMKVSCNIAVQIGETKQSEGQQTVSEQ 672
Query: 504 --------------------RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDY 543
+K + H L E + + F P + A KK IE LI Q+Y
Sbjct: 673 EIEKERFFKLQAAIVRIMKSKKTMTHNDLTVETTTQVSKWFTPKITAIKKAIEYLIDQEY 732
Query: 544 LERYP-ENPN 552
+ R +NP+
Sbjct: 733 IRRTTDDNPS 742
>sp|Q29425|CUL5_RABIT Cullin-5 OS=Oryctolagus cuniculus GN=CUL5 PE=2 SV=3
Length = 780
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 137/580 (23%), Positives = 227/580 (39%), Gaps = 142/580 (24%)
Query: 114 DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVE 173
D F + L T +Y + +++ ++ +YM+ A+ LK+E R RYL++ E VE
Sbjct: 200 DNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVE 259
Query: 174 KVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFY----------------RTI 217
+ + T E + C + + N+ + L M+ I
Sbjct: 260 ALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLKDLEEHII 319
Query: 218 RAGPHD-------------NYME-----------YVTNCFMDHSLFQRALKEAFKIFCN- 252
AG D Y+E V F D F A +A+K N
Sbjct: 320 SAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVND 379
Query: 253 ------------KTVGGFSSSEQ-----LATFCDNILKKSG-NEKLSDEAIEETLEKVVK 294
K VG + E LA +CD +L+K+ ++KL+ E IE L++V+
Sbjct: 380 ATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLL 439
Query: 295 VLVYISDKDLFAEFYRKKLARRLLFDRS-----------------------RTLARKNQ- 330
VL Y+ +KD+F +++ L RRL+ D S LAR Q
Sbjct: 440 VLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKLARMFQD 499
Query: 331 --------TGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVE 382
F++ + NK A +++ +L G W +SS+ +LP+++ +
Sbjct: 500 IKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWS--RSSE-KVFVSLPTELEDLIP 556
Query: 383 VFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNASNR--LSY 440
+ FY+ RKL W + + I K E+ +L ++T+ A+L +N R +S+
Sbjct: 557 EVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISF 616
Query: 441 SQVITQLNLTHDDLVRLLHSLSI---LYYKILIKEPDT---KSISRSDYFELNSKF---- 490
+ L +L R L SL L ++L+ EP K + F +N +F
Sbjct: 617 ENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKDFTEGTLFSVNQEFSLIK 676
Query: 491 -------------------TDRMRGSRS-----------------LSHHRKVLGHQQLVS 514
T+RMR + + RK + + QL +
Sbjct: 677 NAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTRKLYIQIMKMRKKISNAQLQT 736
Query: 515 ECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
E +E+L MF P K K++IE LI Y+ R + NTF
Sbjct: 737 ELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTF 776
>sp|Q93034|CUL5_HUMAN Cullin-5 OS=Homo sapiens GN=CUL5 PE=1 SV=4
Length = 780
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 137/580 (23%), Positives = 227/580 (39%), Gaps = 142/580 (24%)
Query: 114 DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVE 173
D F + L T +Y + +++ ++ +YM+ A+ LK+E R RYL++ E VE
Sbjct: 200 DNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVE 259
Query: 174 KVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFY----------------RTI 217
+ + T E + C + + N+ + L M+ I
Sbjct: 260 ALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLKDLEEHII 319
Query: 218 RAGPHD-------------NYME-----------YVTNCFMDHSLFQRALKEAFKIFCN- 252
AG D Y+E V F D F A +A+K N
Sbjct: 320 SAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVND 379
Query: 253 ------------KTVGGFSSSEQ-----LATFCDNILKKSG-NEKLSDEAIEETLEKVVK 294
K VG + E LA +CD +L+K+ ++KL+ E IE L++V+
Sbjct: 380 ATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLL 439
Query: 295 VLVYISDKDLFAEFYRKKLARRLLFDRS-----------------------RTLARKNQ- 330
VL Y+ +KD+F +++ L RRL+ D S LAR Q
Sbjct: 440 VLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKLARMFQD 499
Query: 331 --------TGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVE 382
F++ + NK A +++ +L G W +SS+ +LP+++ +
Sbjct: 500 IKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWS--RSSE-KVFVSLPTELEDLIP 556
Query: 383 VFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNASNR--LSY 440
+ FY+ RKL W + + I K E+ +L ++T+ A+L +N R +S+
Sbjct: 557 EVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISF 616
Query: 441 SQVITQLNLTHDDLVRLLHSLSI---LYYKILIKEPDT---KSISRSDYFELNSKF---- 490
+ L +L R L SL L ++L+ EP K + F +N +F
Sbjct: 617 ENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKDFTEGTLFSVNQEFSLIK 676
Query: 491 -------------------TDRMRGSRS-----------------LSHHRKVLGHQQLVS 514
T+RMR + + RK + + QL +
Sbjct: 677 NAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISNAQLQT 736
Query: 515 ECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
E +E+L MF P K K++IE LI Y+ R + NTF
Sbjct: 737 ELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTF 776
>sp|Q5RB36|CUL5_PONAB Cullin-5 OS=Pongo abelii GN=CUL5 PE=2 SV=3
Length = 780
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 137/580 (23%), Positives = 227/580 (39%), Gaps = 142/580 (24%)
Query: 114 DIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVE 173
D F + L T +Y + +++ ++ +YM+ A+ LK+E R RYL++ E VE
Sbjct: 200 DNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVE 259
Query: 174 KVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFY----------------RTI 217
+ + T E + C + + N+ + L M+ I
Sbjct: 260 ALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLKDLEEHII 319
Query: 218 RAGPHD-------------NYME-----------YVTNCFMDHSLFQRALKEAFKIFCN- 252
AG D Y+E V F D F A +A+K N
Sbjct: 320 SAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVND 379
Query: 253 ------------KTVGGFSSSEQ-----LATFCDNILKKSG-NEKLSDEAIEETLEKVVK 294
K VG + E LA +CD +L+K+ ++KL+ E IE L++V+
Sbjct: 380 ATIFKLELPLKQKGVGLKTQPESKCPELLAIYCDMLLRKTPLSKKLTSEEIEAKLKEVLL 439
Query: 295 VLVYISDKDLFAEFYRKKLARRLLFDRS-----------------------RTLARKNQ- 330
VL Y+ +KD+F +++ L RRL+ D S LAR Q
Sbjct: 440 VLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKLARMFQD 499
Query: 331 --------TGFEKYLRYNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVE 382
F++ + NK A +++ +L G W +SS+ +LP+++ +
Sbjct: 500 IKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWS--RSSE-KVFVSLPTELEDLIP 556
Query: 383 VFKRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNASNR--LSY 440
+ FY+ RKL W + + I K E+ +L ++T+ A+L +N R +S+
Sbjct: 557 EVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISF 616
Query: 441 SQVITQLNLTHDDLVRLLHSLSI---LYYKILIKEPDT---KSISRSDYFELNSKF---- 490
+ L +L R L SL L ++L+ EP K + F +N +F
Sbjct: 617 ENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKDFTEGTLFSVNQEFSLIK 676
Query: 491 -------------------TDRMRGSRS-----------------LSHHRKVLGHQQLVS 514
T+RMR + + RK + + QL +
Sbjct: 677 NAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISNAQLQT 736
Query: 515 ECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
E +E+L MF P K K++IE LI Y+ R + NTF
Sbjct: 737 ELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTF 776
>sp|Q9JJ31|CUL5_RAT Cullin-5 OS=Rattus norvegicus GN=Cul5 PE=1 SV=3
Length = 780
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 151/672 (22%), Positives = 256/672 (38%), Gaps = 163/672 (24%)
Query: 40 YMALHITIYNMCSQNTPNNNSASCKRRNIPGFDEFGLACFRDLVYDALKHKAKDAVIDER 99
+ L +T+ S N +N S R+ + D + + F + + + L+ A V ER
Sbjct: 111 FCQLEVTLLGKQSSNKKSNMEDSIVRKLM--LDTWNESIFSN-IKNRLQDSAMKLVHAER 167
Query: 100 EREQVDRALLANVL------------------DIFVEHMLQDTSSYYSRISTNWILKDPC 141
E D L+ V D F + L T +Y + +++ ++
Sbjct: 168 LGEAFDSQLVIGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGV 227
Query: 142 PDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVYATQLLEKEQSGCGALFRG 201
+YM+ A+ LK+E R RYL++ E VE + + T E + C + +
Sbjct: 228 QNYMKYADAKLKEEEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQGMIKR 287
Query: 202 NKVDDLSRMYRFYRTIRAG-----------------------------PHDNYME----- 227
N+ + L M+ + G + Y+E
Sbjct: 288 NETEKLHLMFSLMDKVPGGIEPMLKDLEEHIISAGLADMVAAAETITTDSEKYVEQLLTL 347
Query: 228 ------YVTNCFMDHSLFQRALKEAFKIFCN-------------KTVGGFSSSEQ----- 263
V F D F A +A+K N K VG + E
Sbjct: 348 FNRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPEL 407
Query: 264 LATFCDNILKKSG-NEKLSDEAIEETLEKVVKVLVYISDKDLFAEFYRKKLARRLLFDRS 322
LA +CD +L+K+ ++KL+ E IE L++V+ VL Y+ +KD+F +++ L RRL+ D S
Sbjct: 408 LANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDIS 467
Query: 323 -----------------------RTLARKNQ---------TGFEKYLRYNKNAHAGIDLS 350
LAR Q F++ + NK A ++
Sbjct: 468 ADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVN 527
Query: 351 VTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINA 410
+ +L G W +SS+ +LP+++ + + FY+ RKL W + + I
Sbjct: 528 IKILNAGAWS--RSSE-KVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITF 584
Query: 411 KFELKNIELIISTYHAAILDLFNASNR--LSYSQVITQLNLTHDDLVRLLHSLSI---LY 465
K E+ +L ++T+ A+L +N R +S+ + L +L R L SL L
Sbjct: 585 KNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLK 644
Query: 466 YKILIKEPDT---KSISRSDYFELNSKF-----------------------TDRMRGSRS 499
++L+ +P K + F +N F T+RMR +
Sbjct: 645 RQVLLYDPQVNSPKDFTEGTLFSVNQDFSLIKNAKVQKRGKINLIGRLQLTTERMREEEN 704
Query: 500 -----------------LSHHRKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQD 542
+ RK + + QL +E +E+L MF P K K++IE LI
Sbjct: 705 EGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHK 764
Query: 543 YLERYPENPNTF 554
Y+ R + NTF
Sbjct: 765 YIRRDEADINTF 776
>sp|Q9D5V5|CUL5_MOUSE Cullin-5 OS=Mus musculus GN=Cul5 PE=1 SV=3
Length = 780
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 153/672 (22%), Positives = 257/672 (38%), Gaps = 163/672 (24%)
Query: 40 YMALHITIYNMCSQNTPNNNSASCKRRNIPGFDEFGLACFRDLVYDALKHKAKDAVIDER 99
+ L +T+ S N +N S R+ + D + + F + + + L+ A V ER
Sbjct: 111 FCQLEVTLLGKQSSNKKSNMEDSIVRKLM--LDTWNESIFSN-IKNRLQDSAMKLVHAER 167
Query: 100 EREQVDRALLANVL------------------DIFVEHMLQDTSSYYSRISTNWILKDPC 141
E D L+ V D F + L T +Y + +++ ++
Sbjct: 168 LGEAFDSQLVIGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGV 227
Query: 142 PDYMRKAEECLKKERDRVSRYLQSNGEEKLVEKVQHELLVVYATQLLEKEQSGCGALFRG 201
+YM+ A+ LK+E R RYL++ E VE + + T E + C + +
Sbjct: 228 QNYMKYADAKLKEEEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQGMIKR 287
Query: 202 NKVDDLSRMYRFY----------------RTIRAGPHD-------------NYME----- 227
N+ + L M+ I AG D Y+E
Sbjct: 288 NETEKLHLMFSLMDKVPNGIEPMLKDLEEHIISAGLADMVAAAETITTDSEKYVEQLLTL 347
Query: 228 ------YVTNCFMDHSLFQRALKEAFKIFCN-------------KTVGGFSSSEQ----- 263
V F D F A +A+K N K VG + E
Sbjct: 348 FNRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPEL 407
Query: 264 LATFCDNILKKSG-NEKLSDEAIEETLEKVVKVLVYISDKDLFAEFYRKKLARRLLFDRS 322
LA +CD +L+K+ ++KL+ E IE L++V+ VL Y+ +KD+F +++ L RRL+ D S
Sbjct: 408 LANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDIS 467
Query: 323 -----------------------RTLARKNQ---------TGFEKYLRYNKNAHAGIDLS 350
LAR Q F++ + NK A ++
Sbjct: 468 ADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVN 527
Query: 351 VTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINA 410
+ +L G W +SS+ +LP+++ + + FY+ RKL W + + I
Sbjct: 528 IKILNAGAWS--RSSE-KVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITF 584
Query: 411 KFELKNIELIISTYHAAILDLFNASNR--LSYSQVITQLNLTHDDLVRLLHSLSI---LY 465
K E+ +L ++T+ A+L +N R +S+ + L +L R L SL L
Sbjct: 585 KNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLK 644
Query: 466 YKILIKEPDT---KSISRSDYFELNSKF-----------------------TDRMRGSRS 499
++L+ +P K + F +N F T+RMR +
Sbjct: 645 RQVLLYDPQVNSPKDFTEGTLFSVNQDFSLIKNAKVQKRGKINLIGRLQLTTERMREEEN 704
Query: 500 -----------------LSHHRKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQD 542
+ RK + + QL +E +E+L MF P K K+++E LI
Sbjct: 705 EGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQMEWLIEHR 764
Query: 543 YLERYPENPNTF 554
Y+ R + NTF
Sbjct: 765 YIRRDEADINTF 776
>sp|Q9XIE8|CLL3_ARATH Cullin-like protein 3 OS=Arabidopsis thaliana GN=At1g59800 PE=3
SV=2
Length = 255
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 109/246 (44%), Gaps = 73/246 (29%)
Query: 1 MVQRRLIEFDEGWEYIQKGIGKLKRILEGLREPPFSSEEYMALHITIYNMCSQNTPNN-- 58
MV I+F+ W IQ+G KL R++EG EP F+ E M +H Y +C+ P
Sbjct: 1 MVAPTEIKFEVEWSNIQQGFTKLIRMIEGESEPAFNQEIMMMMHTATYRICAYKNPQQLY 60
Query: 59 --------NSA-------------SC-------------------KRRNIPGFDEF---- 74
N A C RR + D F
Sbjct: 61 DKYRELIENYAIQTVLPSLREKHDECMLRELAKRWNAHKLLVRLFSRRLVYLDDSFLSKK 120
Query: 75 GLACFR--------DLVYDALKHKAKDAVI----DEREREQVDRALLANVLDIFVEH--- 119
GL R D VY ++ A +A++ ERE EQ+DR L+ NV+D+FVE+
Sbjct: 121 GLPSLREVGLNCFRDQVYREMQSMAAEAILALIHKEREGEQIDRELVRNVIDVFVENGMG 180
Query: 120 ------------MLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNG 167
MLQDT+SYYS ++ WI ++ C DY K ++CL++ER+RV+ YL
Sbjct: 181 TLKKYEEDFERLMLQDTASYYSSKASRWIQEESCLDYTLKPQQCLQRERERVTHYLHPTT 240
Query: 168 EEKLVE 173
E KL E
Sbjct: 241 EPKLFE 246
>sp|Q23639|CUL5_CAEEL Cullin-5 OS=Caenorhabditis elegans GN=cul-5 PE=1 SV=2
Length = 765
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 136/586 (23%), Positives = 229/586 (39%), Gaps = 158/586 (26%)
Query: 116 FVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEE--KLVE 173
F ++ T+ YY +I N + + +YM A++ L++E+ R RYL+ N K +E
Sbjct: 187 FERQFIEQTTEYYKKICGNLLNELGVLEYMVYADKKLEEEQQRAKRYLEMNSPTSGKHME 246
Query: 174 KVQHELLVVYATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAG------------- 220
K L+ + +L + C L V+ L R+YR R R+G
Sbjct: 247 KAVIALVESFEDTIL----AECSKLIASKDVERLQRLYRLIRRTRSGIDTVLKCIDTHIR 302
Query: 221 -----------------PH----------DNYMEYVTNCFMDHSLFQRALKEAFKIFCN- 252
P D + V F D + A +AF+ N
Sbjct: 303 TEGLNDMRNNAENLSTDPERYVQQLLLMFDKFSSLVREGFCDDARLLTARDKAFRAVVND 362
Query: 253 -------------KTVGGFSS-SEQLATFCDNILKKSG-NEKLSDEAIEETLEKVVKVLV 297
+T+ S +E LA +CD +L+K+ ++KL+ E I+E L +V+ VL
Sbjct: 363 SSIFKTEMMNKKGRTLSVESKCAELLANYCDLLLRKTQLSKKLTSEEIDEKLNQVLLVLK 422
Query: 298 YISDKDLFAEFYRKKLARRLLFDRSR--------------------------------TL 325
Y+ +KD+F F+R L+RRL+ + S L
Sbjct: 423 YVENKDVFMRFHRAHLSRRLILEMSADQEKEEMMVTKLRECGMPSDAVNKLSRMLQDIEL 482
Query: 326 ARKNQTGFEKYLR-YNKNAHAGIDLSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVF 384
+ + F+K L N N +++ VL G W S + F+LP ++ V
Sbjct: 483 NKDMNSSFKKALTGTNNNKSIADSINMKVLNGGAWGRGGSERIR--FSLPRELEDFVPEM 540
Query: 385 KRFYETKTKHRKLSWIYSLGQCHI------NAKFELKNIELIISTYHAAILDLFN--ASN 436
+ FY+ + RKL W++ + +F+L+ +T+ A+L FN A +
Sbjct: 541 EAFYKKQHNGRKLCWMHHWSSGTMVFGTANGGRFDLE-----CTTFQMAVLFCFNDRAHD 595
Query: 437 RLSYSQVITQLNLTHDDLVRLLHSLSI---LYYKILIKEPDTKSISRSDY-----FELNS 488
++S + L +L R L SL + Y+IL+ + + +++ D+ F +N
Sbjct: 596 KISLETLRLATELPDAELNRTLLSLVAYPKMRYQILLCDVPSTTVTARDFTDSTKFLINH 655
Query: 489 KFT------DRMRGSRSL--------------SHH--------------------RKVLG 508
F + RG +L H RK
Sbjct: 656 DFNVVKNGKSQQRGKVNLIGRLQLSLEANAEKEHESIVALRELRVQEGIVKILKTRKTYT 715
Query: 509 HQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENPNTF 554
QL E +E+L +F P K K++I+ LI Y+ER ++ NTF
Sbjct: 716 LAQLTMELVEILKPLFIPNRKIIKEQIDWLIENKYMERRADDINTF 761
>sp|Q21346|CUL6_CAEEL Cullin-6 OS=Caenorhabditis elegans GN=cul-6 PE=1 SV=1
Length = 729
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 127/504 (25%), Positives = 201/504 (39%), Gaps = 96/504 (19%)
Query: 132 STNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKLVE------KVQHEL--LVVY 183
STN +L D C + + LK R L++ +E L +V H L L VY
Sbjct: 237 STNDLLIDSCESIL--ISDRLKFLHSEFERLLEARKDEHLTRMYSLCRRVTHGLEDLRVY 294
Query: 184 ATQLLEKEQSGCGALFRGNKVDDLSRMYRFYRTIRAGPHDNYMEYVTNCFMDHSLFQRAL 243
+ + KE G L R K L + Y T H+ Y + F ++LF ++L
Sbjct: 295 LEKRILKE--GHETLQRLAKDSGLKTTPKEYITKLLEVHEIYFNLINKAFDRNALFMQSL 352
Query: 244 KEAFKIFCNKTVGGFSSSEQ---------LATFCDNILKKSGNEKLSDEAIEETLEKVVK 294
+A K F + E+ LA +CD +LKK N K+ DE L+K +
Sbjct: 353 DKASKDFIEANAVTMLAPEKHRSTRSADYLARYCDQLLKK--NSKVQDET---ALDKALT 407
Query: 295 VLVYISDKDLFAEFYRKKLARRLLFDRSRTLARK-----NQTGFEKYLRYNKN------- 342
VL YIS+KD+F +Y+ + R++ + S + + N T E L Y +N
Sbjct: 408 VLKYISEKDVFQLYYQNWFSERIINNSSASDDAEEKFITNLTATEG-LEYTRNLVKMVED 466
Query: 343 ---------------AHAGIDLSVTVLATGFWPSYKSSDLNPI-FNLPSQMIKCVEVFKR 386
ID +V + TG WPS L+ I LP ++ ++ F
Sbjct: 467 AKISKDLTTEFKDIKTEKSIDFNVILQTTGAWPS-----LDQIKIILPRELSTILKEFDT 521
Query: 387 FYETKTKHRKLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQ 446
FY R+L+W YS + +N+K K I++ L LFN + + Q+
Sbjct: 522 FYNASHNGRRLNWAYSQCRGEVNSKAFEKKYVFIVTASQLCTLYLFNEQDSFTIEQISKA 581
Query: 447 LNLTHDDLVRLLHSLSILYYKILIKE---------PD------TKSISRSDYFELNSKF- 490
+ +T ++ SL+ + +L+ + PD TK ++ +L +
Sbjct: 582 IEMTAKSTSAIVGSLNPVIDPVLVVDKGNEKDGYPPDAVVSLNTKYANKKVRVDLTTAIK 641
Query: 491 -------TDRMRGSRS-------------LSHHRKVLGHQQLVSECIELLGRMFKPAVKA 530
TD ++ + + RK L H L++E I L F P V+
Sbjct: 642 KATADRETDAVQNTVESDRKYEIKACIVRIMKTRKSLTHTLLINEIISQLKSRFTPNVQM 701
Query: 531 FKKRIEGLISQDYLERYPENPNTF 554
K IE LI Q Y+ R N +
Sbjct: 702 IKICIEILIEQLYIRRSENEHNVY 725
>sp|Q17392|CUL4_CAEEL Cullin-4 OS=Caenorhabditis elegans GN=cul-4 PE=1 SV=3
Length = 840
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 124/603 (20%), Positives = 237/603 (39%), Gaps = 138/603 (22%)
Query: 71 FDEFGLACFRDLVYDALKHKAKDAVIDEREREQVDRALLANVLDIFVEHMLQDTSSYYSR 130
F EF + +Y A++ + +D R VD +V + F + ++ +Y+
Sbjct: 253 FKEFKATKLFNALYMAMQKIMQRYPVDSPLRSLVDMLQTVHVSEEFAKFLISQLREHYNN 312
Query: 131 ISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQ----SNGEEKLVEKVQHELLVVYATQ 186
+ + K C DYM E D+++RY Q + E ++ VQ + Q
Sbjct: 313 ERIDKVPKMNCNDYMEYCE-------DQINRYSQLVKVNFDEPSALKDVQATVTNCLIQQ 365
Query: 187 LL-EKEQSGCGALFRGNKVDDLSRMYRFYRTIRAGPHDNYMEY-----------VTNC-- 232
+ E L + + D+ RM+ R G + ++ + C
Sbjct: 366 AIPEILTHDFDDLIDSDNISDIGRMFNLCRQCVGGEDEVRTQFSKYLKKRGEKLIATCPD 425
Query: 233 ---------------FMDHSLFQRA---------LKEAFKIFCNKTVGGFSSSEQLATFC 268
F+ F+ A L +AF+ F NK V S+E ++
Sbjct: 426 EDLVSELLAFKKKVDFIMTGSFKSANDPVKMRQCLSDAFESFVNKQVD--RSAELISKHF 483
Query: 269 DNILKKSGNEKLSDEAIEETLEKVVKVLVYISDKDLFAEFYRKKLARRLLFDRSRTLAR- 327
+L S D +++ +++ + + Y+ KD+F +Y++ LA+RL +RS ++
Sbjct: 484 HTLLHSSNKNVSDDTTLDQMVDEAIVLFRYLRGKDVFEAYYKRGLAKRLFLERSASVDAE 543
Query: 328 -------KNQTG-----------------------FEKYLRYNKNAHAGIDLSVTVLATG 357
K + G F +YL + A + + V+
Sbjct: 544 KMVLCKLKTECGSAFTYKLEGMFKDMDASENYGRLFNQYLEHMNKEKA--NFTARVITPE 601
Query: 358 FWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELK-N 416
+WP+Y + ++N +P +M + ++ FY + +R + W + L I+A F
Sbjct: 602 YWPTYDTYEIN----IPKEMRDTLTDYQDFYRVQHGNRNVKWHHGLASAVISASFRPGCK 657
Query: 417 IELIISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLVRLLHSLSIL----YYKILI-- 470
ELI + Y IL LFN + ++++ + ++V+ + L++L K+L
Sbjct: 658 KELIATMYQTVILLLFNKCETWTVAEIVEHTKILEIEVVK--NVLALLGGRDKPKVLQRV 715
Query: 471 ------KEPDTKSISRSDYFELNSKFTD---RMRGSR----------------------- 498
K+ T +++ F +NSKFT+ R+R ++
Sbjct: 716 EGGGSEKKEGTVENLKNEKFVVNSKFTEKRCRVRIAQVNIKTAVEETKEVKEEVNSDRQY 775
Query: 499 -------SLSHHRKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLERYPENP 551
+ RK L HQ L++E ++ L F + KKR+E LI ++Y+ R PE
Sbjct: 776 KIDAAVVRIMKARKQLNHQTLMTELLQQL--RFPVSTADIKKRLESLIEREYISRDPEEA 833
Query: 552 NTF 554
+++
Sbjct: 834 SSY 836
>sp|P53202|CUL3_YEAST Cullin-3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=CUL3 PE=1 SV=1
Length = 744
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 156/374 (41%), Gaps = 64/374 (17%)
Query: 243 LKEAFKIFCNKTVGGFSSSEQLATFCDNILKKSGNEKLSDEAIEETLEKVVKVLVYISDK 302
L + F ++ +K G SE L+T+ D+ +K++ + I++ L K++ +++K
Sbjct: 369 LGDVFSMYFSKE--GALPSEYLSTYVDHCMKRTKEKDAEIVKIKQDLLDSTKLIGLLTEK 426
Query: 303 DLFAEFYRKKLARRLLFDRS-------------RTLARKNQTGFEKYLR--------YNK 341
D+F + Y+K+L+RRLL RS + L + E LR Y
Sbjct: 427 DIFEKIYKKQLSRRLLQQRSLVEIEKWMVQMIKKVLGTFFTSKLEIMLRDISLSSEMYQA 486
Query: 342 NAHAGID------LSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHR 395
H+ I+ + VL WP ++ ++ +LP +M + + F+ +Y K K R
Sbjct: 487 FQHSTINSIEYLSFAPQVLTRTSWPFQSTNPIDEGISLPPRMSQILAGFEGYYSLKYKER 546
Query: 396 KLSWIYSLGQCHINAKFELKNIELIISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLV 455
L W + L I +F E+ S Y I LF L+ ++ ++ DD+
Sbjct: 547 VLKWAHHLSVIEIGCQFNSGYYEISFSVYAGVIFLLFEDYEELTLGEIYELTHIPIDDVK 606
Query: 456 RLLHSLS-ILYYKILIKEPDTKSISRS-DYF---------------ELNSKFTDRMRGSR 498
L+ S+S I KIL K + ++ S +YF L S+ +D + +
Sbjct: 607 SLVMSMSTIPRCKILKKSSSSGNMKFSVNYFFSSPNRKVKVPVIACPLPSQKSDNLATAS 666
Query: 499 SLSHH------------------RKVLGHQQLVSECIELLGRMFKPAVKAFKKRIEGLIS 540
S+ + L HQQL+ + K+ I+ LI
Sbjct: 667 SVDTYDNEIVMELSAIIVRIMKTEGKLSHQQLLERTTKRTQSRLSLTPSILKRSIQLLIE 726
Query: 541 QDYLERYPENPNTF 554
++Y++R ++P+ +
Sbjct: 727 KEYIQRNADDPSYY 740
>sp|Q12018|CDC53_YEAST Cell division control protein 53 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CDC53 PE=1 SV=1
Length = 815
Score = 72.4 bits (176), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 119/594 (20%), Positives = 215/594 (36%), Gaps = 170/594 (28%)
Query: 113 LDIFVEHMLQDTSSYYSRISTNWILKDPCPDYMRKAEECLKKERDRVSRYLQSNGEEKL- 171
+ +F + L+ T YY++ + +++ K +Y+ +A E +K+E ++ Y + ++ L
Sbjct: 221 IQVFEKPFLKKTQEYYTQYTNDYLEKHSVTEYIFEAHEIIKREEKAMTIYWDDHTKKPLS 280
Query: 172 -----------VEKVQHELLVVYATQLLEKEQSGCGALFRG------------------- 201
+EK+++E +V+ + +EK S + R
Sbjct: 281 MALNKVLITDHIEKLENEFVVLLDARDIEKITSLYALIRRDFTLIPRMASVFENYVKKTG 340
Query: 202 -NKVDDLSRMYR--FYRTIRAGP-----------------------HDNYMEYVTNCFMD 235
N++ L M++ + A P HD + + F D
Sbjct: 341 ENEISSLLAMHKHNIMKNENANPKKLALMTAHSLSPKDYIKKLLEVHDIFSKIFNESFPD 400
Query: 236 HSLFQRALKEAFKIFCNKTVGGFS------------SSEQLATFCDNILKKSGNEKLSDE 283
+AL A F N + F+ +SE LA + D +LKK+ +++ +
Sbjct: 401 DIPLAKALDNACGAFIN--INEFALPAGSPKSATSKTSEMLAKYSDILLKKATKPEVASD 458
Query: 284 AIEETLEKVVKVLVYISDKDLFAEFYRKKLARRLLFDRSRTLARKNQTGFEKYLRYNKNA 343
+E ++ + Y++DKD F YR+ A+RL+ S T A + ++ N
Sbjct: 459 MSDE---DIITIFKYLTDKDAFETHYRRLFAKRLIHGTS-TSAEDEENIIQRLQAANSME 514
Query: 344 HAG----------------------------------IDLSVTVLATGFWP-SYKSSDLN 368
+ G DL VLA WP SY+ +
Sbjct: 515 YTGKITKMFQDIRLSKILEDDFAVALKNEPDYSKAKYPDLQPFVLAENMWPFSYQEVE-- 572
Query: 369 PIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINAKFELKN---IELIISTYH 425
F LP +++ E K Y K R L W++ L + + A ++ +
Sbjct: 573 --FKLPKELVPSHEKLKESYSQKHNGRILKWLWPLCRGELKADIGKPGRMPFNFTVTLFQ 630
Query: 426 AAILDLFNASNRLSYSQVI--TQLNLTH---------------------DDLVRLLHSLS 462
AIL L+N ++ L+ + T L + H D LV+
Sbjct: 631 MAILLLYNDADVLTLENIQEGTSLTIQHIAAAMVPFIKFKLIQQVPPGLDALVKPETQFK 690
Query: 463 ILY-YKILIKEPDTKSISRSDYFEL--------------NSKFTDRMRGSRSLSHHRKV- 506
+ YK L + S ++D + N + T+ R + L+ R++
Sbjct: 691 LSRPYKALKTNINFASGVKNDILQSLSGGGHDNHGNKLGNKRLTEDERIEKELNTERQIF 750
Query: 507 --------------LGHQQLVSECIELLGRMFKPAVKAFKKRIEGLISQDYLER 546
L H LV+ECI + F V K+ I+ LI + YL+R
Sbjct: 751 LEACIVRIMKAKRNLPHTTLVNECIAQSHQRFNAKVSMVKRAIDSLIQKGYLQR 804
>sp|Q8H1U5|APC2_ARATH Anaphase-promoting complex subunit 2 OS=Arabidopsis thaliana
GN=APC2 PE=1 SV=1
Length = 865
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 15/156 (9%)
Query: 306 AEFYRKKLARRLLFDRSRT---LARKNQTGFEKYLRYNKNAHAGID-LSVTVLATGFWPS 361
A R ++ L D R + + +QTG E LR N+ +D L+ T+L+T FWP
Sbjct: 590 ASMQRCEIMLNDLIDSKRVNTNIKKASQTGAE--LRENE---LSVDTLTSTILSTNFWPP 644
Query: 362 YKSSDLNPIFNLPSQMIKCVEVF-KRFYETKTKHRKLSWIYSLGQCHINAKFELKNIELI 420
+ L LP + K + + R++E KT RKL W +LG + +FE + ++
Sbjct: 645 IQDEPLE----LPGPVDKLLSDYANRYHEIKTP-RKLLWKKNLGTVKLELQFEDRAMQFT 699
Query: 421 ISTYHAAILDLFNASNRLSYSQVITQLNLTHDDLVR 456
+S HAAI+ F +Y + + + D L R
Sbjct: 700 VSPTHAAIIMQFQEKKSWTYKDLAEVIGIPIDALNR 735
>sp|Q874R3|APC2_SCHPO Anaphase-promoting complex subunit 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=apc2 PE=1 SV=1
Length = 681
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 349 LSVTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHI 408
L VT+L+ FWP+ F+LP + K ++ + Y + + R+L ++ +LG +
Sbjct: 458 LHVTILSRLFWPTLSVR----YFHLPGPLKKELDAYAEEYRERKRKRELVFLPNLGSVEL 513
Query: 409 NAKFELKNIELIISTYHAAILDLFNASNRL 438
+ E + + L ++ AA + LF ++ L
Sbjct: 514 EIELEDRTLTLTVTPEQAAFISLFEETSTL 543
>sp|Q8BZQ7|ANC2_MOUSE Anaphase-promoting complex subunit 2 OS=Mus musculus GN=Anapc2 PE=1
SV=2
Length = 837
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 351 VTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINA 410
+L++ FWP +K L +P + ++V+ + YE R LSW ++LG ++
Sbjct: 608 AVILSSEFWPPFKDEKLE----VPEDIRAALDVYCKKYEKLKAMRTLSWKHTLGLVTMDV 663
Query: 411 KFELKNIELIISTYHAAILDLFNASNRLSYS 441
+ + + + ++ A +L F N+ S++
Sbjct: 664 ELADRTLSVAVTPVQAVVLLYFQ--NQASWT 692
>sp|Q9UJX6|ANC2_HUMAN Anaphase-promoting complex subunit 2 OS=Homo sapiens GN=ANAPC2 PE=1
SV=1
Length = 822
Score = 42.0 bits (97), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 351 VTVLATGFWPSYKSSDLNPIFNLPSQMIKCVEVFKRFYETKTKHRKLSWIYSLGQCHINA 410
+L++ FWP +K L +P + +E + + YE R LSW ++LG ++
Sbjct: 593 AVILSSEFWPPFKDEKLE----VPEDIRAALEAYCKKYEQLKAMRTLSWKHTLGLVTMDV 648
Query: 411 KFELKNIELIISTYHAAILDLFN 433
+ + + + ++ A IL F
Sbjct: 649 ELADRTLSVAVTPVQAVILLYFQ 671
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 200,739,890
Number of Sequences: 539616
Number of extensions: 8290931
Number of successful extensions: 22937
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 22607
Number of HSP's gapped (non-prelim): 207
length of query: 554
length of database: 191,569,459
effective HSP length: 123
effective length of query: 431
effective length of database: 125,196,691
effective search space: 53959773821
effective search space used: 53959773821
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)