Query 043777
Match_columns 231
No_of_seqs 267 out of 2247
Neff 8.9
Searched_HMMs 46136
Date Fri Mar 29 08:15:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043777.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043777hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR03649 ergot_EASG ergot alk 99.8 1.1E-17 2.4E-22 140.8 14.9 67 6-80 1-74 (285)
2 CHL00194 ycf39 Ycf39; Provisio 99.7 9E-17 1.9E-21 137.5 16.3 70 5-80 1-71 (317)
3 PF05368 NmrA: NmrA-like famil 99.7 1.2E-16 2.6E-21 130.8 13.0 69 7-79 1-70 (233)
4 KOG1502 Flavonol reductase/cin 99.7 1.8E-15 4E-20 127.4 14.3 77 4-80 6-85 (327)
5 PLN02657 3,8-divinyl protochlo 99.6 4E-13 8.7E-18 118.2 18.3 78 2-79 58-142 (390)
6 COG1087 GalE UDP-glucose 4-epi 99.4 6.4E-12 1.4E-16 104.1 13.5 70 5-79 1-73 (329)
7 TIGR03466 HpnA hopanoid-associ 99.3 7.2E-11 1.6E-15 100.8 15.6 70 5-80 1-71 (328)
8 PRK15181 Vi polysaccharide bio 99.3 1.8E-10 4E-15 99.8 15.2 78 4-81 15-98 (348)
9 COG0702 Predicted nucleoside-d 99.3 2.5E-10 5.4E-15 95.0 15.4 69 5-79 1-69 (275)
10 PF01073 3Beta_HSD: 3-beta hyd 99.2 2.9E-11 6.2E-16 101.9 8.4 110 8-122 1-122 (280)
11 PLN00016 RNA-binding protein; 99.2 1.5E-10 3.3E-15 101.4 12.3 75 4-79 52-136 (378)
12 PF13460 NAD_binding_10: NADH( 99.1 2.7E-10 5.8E-15 89.5 9.1 97 7-115 1-97 (183)
13 PLN02214 cinnamoyl-CoA reducta 99.1 6.1E-10 1.3E-14 96.4 11.1 78 4-82 10-90 (342)
14 PLN00198 anthocyanidin reducta 99.1 3.8E-10 8.2E-15 97.3 9.7 79 4-82 9-89 (338)
15 PLN02662 cinnamyl-alcohol dehy 99.1 2.9E-10 6.2E-15 97.1 8.8 79 4-82 4-85 (322)
16 PLN02583 cinnamoyl-CoA reducta 99.1 5E-10 1.1E-14 95.0 9.8 78 3-80 5-85 (297)
17 PLN02427 UDP-apiose/xylose syn 99.1 5.6E-10 1.2E-14 98.1 9.1 78 4-83 14-96 (386)
18 TIGR01214 rmlD dTDP-4-dehydror 99.1 3.7E-09 7.9E-14 88.8 13.4 32 6-37 1-32 (287)
19 PLN02206 UDP-glucuronate decar 99.1 4.6E-09 9.9E-14 93.9 14.5 70 4-79 119-189 (442)
20 PLN02650 dihydroflavonol-4-red 99.1 7.8E-10 1.7E-14 95.8 9.4 80 3-82 4-86 (351)
21 PLN02695 GDP-D-mannose-3',5'-e 99.1 6.7E-10 1.4E-14 97.2 8.9 76 1-81 18-93 (370)
22 TIGR03589 PseB UDP-N-acetylglu 99.0 1.1E-09 2.3E-14 94.2 9.7 81 1-83 1-84 (324)
23 PLN02166 dTDP-glucose 4,6-dehy 99.0 5.1E-09 1.1E-13 93.5 14.3 70 4-79 120-190 (436)
24 PLN02986 cinnamyl-alcohol dehy 99.0 1E-09 2.2E-14 94.0 9.4 79 4-82 5-86 (322)
25 COG1088 RfbB dTDP-D-glucose 4, 99.0 7.9E-09 1.7E-13 85.7 14.1 96 5-101 1-110 (340)
26 PRK05865 hypothetical protein; 99.0 5.2E-09 1.1E-13 99.4 14.8 70 5-82 1-70 (854)
27 PRK07201 short chain dehydroge 99.0 7.1E-09 1.5E-13 97.0 15.3 75 5-80 1-84 (657)
28 COG0300 DltE Short-chain dehyd 99.0 7.2E-09 1.6E-13 85.8 13.0 82 2-85 4-96 (265)
29 PRK11908 NAD-dependent epimera 99.0 1.5E-09 3.3E-14 93.9 9.5 74 5-83 2-78 (347)
30 TIGR01181 dTDP_gluc_dehyt dTDP 99.0 9.9E-09 2.1E-13 87.0 14.2 75 6-81 1-81 (317)
31 TIGR01472 gmd GDP-mannose 4,6- 99.0 1.6E-09 3.4E-14 93.6 9.3 78 5-82 1-87 (343)
32 COG2910 Putative NADH-flavin r 99.0 4.9E-09 1.1E-13 81.2 10.2 68 5-79 1-68 (211)
33 PLN02686 cinnamoyl-CoA reducta 99.0 1.6E-09 3.4E-14 94.7 8.7 76 4-82 53-137 (367)
34 PLN02896 cinnamyl-alcohol dehy 99.0 2.2E-09 4.7E-14 93.2 9.0 77 4-82 10-88 (353)
35 PLN02989 cinnamyl-alcohol dehy 99.0 3.1E-09 6.6E-14 91.0 9.6 82 1-82 1-86 (325)
36 PRK06179 short chain dehydroge 99.0 3E-09 6.6E-14 88.6 8.7 76 1-83 1-83 (270)
37 TIGR02622 CDP_4_6_dhtase CDP-g 99.0 4.2E-09 9E-14 91.3 9.8 77 4-82 4-84 (349)
38 PLN02572 UDP-sulfoquinovose sy 98.9 4.3E-09 9.4E-14 94.1 9.8 78 4-81 47-144 (442)
39 KOG1371 UDP-glucose 4-epimeras 98.9 2.5E-08 5.3E-13 83.7 13.4 71 4-74 2-76 (343)
40 PLN02260 probable rhamnose bio 98.9 2.6E-08 5.7E-13 93.5 15.1 77 4-80 6-87 (668)
41 PRK12429 3-hydroxybutyrate deh 98.9 6.2E-09 1.3E-13 85.8 9.6 82 1-82 1-90 (258)
42 PRK05993 short chain dehydroge 98.9 6.3E-09 1.4E-13 87.3 9.1 78 1-84 1-87 (277)
43 PRK08125 bifunctional UDP-gluc 98.9 4.6E-09 9.9E-14 98.5 8.9 74 4-82 315-391 (660)
44 PRK06180 short chain dehydroge 98.9 1E-08 2.3E-13 85.9 9.7 81 1-83 1-88 (277)
45 PRK12826 3-ketoacyl-(acyl-carr 98.9 7.7E-09 1.7E-13 84.8 8.7 80 2-81 4-91 (251)
46 PRK06182 short chain dehydroge 98.9 1.4E-08 3E-13 84.9 10.1 76 1-83 1-84 (273)
47 PF01370 Epimerase: NAD depend 98.9 8E-09 1.7E-13 83.9 8.3 73 7-83 1-75 (236)
48 PLN03209 translocon at the inn 98.9 9.2E-09 2E-13 93.5 9.2 77 3-81 79-167 (576)
49 PRK10675 UDP-galactose-4-epime 98.9 1.3E-08 2.9E-13 87.4 9.8 77 5-81 1-81 (338)
50 PLN02653 GDP-mannose 4,6-dehyd 98.9 9.6E-09 2.1E-13 88.6 8.8 80 4-83 6-93 (340)
51 PRK09135 pteridine reductase; 98.9 1.2E-08 2.5E-13 83.7 8.8 79 4-82 6-94 (249)
52 PRK09186 flagellin modificatio 98.9 1.1E-08 2.4E-13 84.3 8.7 79 1-81 1-91 (256)
53 PRK10217 dTDP-glucose 4,6-dehy 98.9 1.2E-08 2.6E-13 88.4 9.3 78 5-82 2-83 (355)
54 PRK07806 short chain dehydroge 98.9 1.9E-08 4.1E-13 82.6 10.0 78 4-81 6-92 (248)
55 KOG1430 C-3 sterol dehydrogena 98.9 2.5E-08 5.5E-13 85.9 11.0 123 1-124 1-134 (361)
56 PLN00141 Tic62-NAD(P)-related 98.9 1.5E-08 3.3E-13 83.7 9.3 76 4-82 17-94 (251)
57 PLN02240 UDP-glucose 4-epimera 98.9 1.7E-08 3.6E-13 87.3 9.9 80 3-82 4-90 (352)
58 PRK06482 short chain dehydroge 98.8 1.2E-08 2.6E-13 85.3 8.6 77 5-83 3-86 (276)
59 PRK09291 short chain dehydroge 98.8 1.5E-08 3.2E-13 83.6 9.0 80 4-83 2-83 (257)
60 PRK05653 fabG 3-ketoacyl-(acyl 98.8 1.2E-08 2.6E-13 83.3 8.3 79 4-82 5-91 (246)
61 COG1090 Predicted nucleoside-d 98.8 2.1E-08 4.6E-13 82.5 9.5 34 7-40 1-34 (297)
62 TIGR01746 Thioester-redct thio 98.8 1.2E-07 2.6E-12 81.8 14.7 74 6-79 1-94 (367)
63 PRK06194 hypothetical protein; 98.8 1.7E-08 3.6E-13 84.9 9.1 78 4-83 6-93 (287)
64 PF04321 RmlD_sub_bind: RmlD s 98.8 7.9E-09 1.7E-13 87.3 7.1 34 5-38 1-34 (286)
65 PRK13394 3-hydroxybutyrate deh 98.8 2E-08 4.3E-13 83.0 9.0 79 4-82 7-93 (262)
66 KOG1429 dTDP-glucose 4-6-dehyd 98.8 5.4E-08 1.2E-12 80.3 11.0 60 4-64 27-87 (350)
67 PRK05557 fabG 3-ketoacyl-(acyl 98.8 3E-08 6.5E-13 81.0 9.5 79 3-82 4-92 (248)
68 PRK08219 short chain dehydroge 98.8 2.3E-08 4.9E-13 80.8 8.6 74 4-81 3-79 (227)
69 PRK12320 hypothetical protein; 98.8 1.9E-08 4.1E-13 93.8 8.7 69 5-82 1-69 (699)
70 PRK07454 short chain dehydroge 98.8 2.5E-08 5.4E-13 81.6 8.6 78 3-82 5-92 (241)
71 PRK12825 fabG 3-ketoacyl-(acyl 98.8 2E-08 4.4E-13 82.0 8.0 79 4-82 6-93 (249)
72 COG0451 WcaG Nucleoside-diphos 98.8 2E-08 4.3E-13 85.1 8.1 72 5-82 1-73 (314)
73 PRK08642 fabG 3-ketoacyl-(acyl 98.8 2.6E-08 5.5E-13 82.0 8.4 79 2-81 3-89 (253)
74 PRK09987 dTDP-4-dehydrorhamnos 98.8 1.6E-08 3.4E-13 86.0 6.9 62 5-83 1-64 (299)
75 PRK10084 dTDP-glucose 4,6 dehy 98.8 4.8E-08 1.1E-12 84.5 10.0 78 5-83 1-83 (352)
76 COG1086 Predicted nucleoside-d 98.8 3.9E-08 8.4E-13 88.1 9.3 82 3-84 249-336 (588)
77 PRK07814 short chain dehydroge 98.8 4.2E-08 9.1E-13 81.5 9.1 77 4-82 10-96 (263)
78 PRK12828 short chain dehydroge 98.8 4.9E-08 1.1E-12 79.4 9.3 77 4-82 7-91 (239)
79 PRK07102 short chain dehydroge 98.8 2.6E-08 5.6E-13 81.7 7.6 78 5-82 2-85 (243)
80 PRK07666 fabG 3-ketoacyl-(acyl 98.8 4.2E-08 9.2E-13 80.1 8.6 79 4-82 7-93 (239)
81 PRK12745 3-ketoacyl-(acyl-carr 98.8 6.7E-08 1.4E-12 79.7 9.9 78 4-82 2-89 (256)
82 PRK10538 malonic semialdehyde 98.7 5.1E-08 1.1E-12 80.3 9.0 76 5-82 1-83 (248)
83 PRK08267 short chain dehydroge 98.7 5.3E-08 1.2E-12 80.6 8.8 76 5-82 2-86 (260)
84 PRK12829 short chain dehydroge 98.7 5.8E-08 1.3E-12 80.3 9.0 78 3-82 10-95 (264)
85 PRK05866 short chain dehydroge 98.7 5.7E-08 1.2E-12 82.3 9.0 77 4-82 40-126 (293)
86 PRK08063 enoyl-(acyl carrier p 98.7 4.1E-08 8.9E-13 80.7 7.9 79 3-81 3-90 (250)
87 PRK07326 short chain dehydroge 98.7 6.1E-08 1.3E-12 79.0 8.9 77 4-82 6-91 (237)
88 PRK12823 benD 1,6-dihydroxycyc 98.7 5.4E-08 1.2E-12 80.6 8.6 75 4-81 8-92 (260)
89 PRK06138 short chain dehydroge 98.7 5.9E-08 1.3E-12 79.7 8.8 78 3-82 4-90 (252)
90 PRK05693 short chain dehydroge 98.7 6.2E-08 1.3E-12 81.0 9.0 74 5-84 2-83 (274)
91 PRK07231 fabG 3-ketoacyl-(acyl 98.7 4.2E-08 9.2E-13 80.5 7.8 77 4-82 5-90 (251)
92 PRK07890 short chain dehydroge 98.7 3.8E-08 8.1E-13 81.3 7.4 77 4-82 5-91 (258)
93 PRK09134 short chain dehydroge 98.7 6.8E-08 1.5E-12 80.0 9.0 79 3-82 8-96 (258)
94 PRK08265 short chain dehydroge 98.7 5.6E-08 1.2E-12 80.7 8.5 76 4-81 6-88 (261)
95 PRK06101 short chain dehydroge 98.7 4.2E-08 9.2E-13 80.4 7.6 67 5-74 2-68 (240)
96 PRK06172 short chain dehydroge 98.7 5.3E-08 1.1E-12 80.3 8.2 79 4-82 7-93 (253)
97 TIGR03206 benzo_BadH 2-hydroxy 98.7 6.2E-08 1.3E-12 79.5 8.6 79 4-82 3-89 (250)
98 PRK12937 short chain dehydroge 98.7 7.7E-08 1.7E-12 78.7 9.1 80 3-82 4-92 (245)
99 PRK08628 short chain dehydroge 98.7 8.7E-08 1.9E-12 79.2 9.5 76 4-82 7-92 (258)
100 COG4221 Short-chain alcohol de 98.7 1.7E-07 3.8E-12 76.0 10.8 67 4-72 6-73 (246)
101 PRK08643 acetoin reductase; Va 98.7 7.7E-08 1.7E-12 79.4 9.1 78 4-83 2-89 (256)
102 PRK07774 short chain dehydroge 98.7 8.3E-08 1.8E-12 78.8 9.3 78 4-83 6-93 (250)
103 PRK08263 short chain dehydroge 98.7 4.7E-08 1E-12 81.8 7.9 79 1-82 1-86 (275)
104 KOG2865 NADH:ubiquinone oxidor 98.7 2.4E-07 5.3E-12 76.6 11.5 69 6-76 63-133 (391)
105 TIGR01777 yfcH conserved hypot 98.7 3.9E-07 8.5E-12 76.4 13.4 34 7-40 1-34 (292)
106 PRK05717 oxidoreductase; Valid 98.7 6.3E-08 1.4E-12 80.0 8.4 78 4-83 10-94 (255)
107 PRK07523 gluconate 5-dehydroge 98.7 6.6E-08 1.4E-12 79.8 8.4 78 4-83 10-97 (255)
108 PRK06914 short chain dehydroge 98.7 5.4E-08 1.2E-12 81.5 7.9 79 1-81 1-89 (280)
109 PRK05565 fabG 3-ketoacyl-(acyl 98.7 7.4E-08 1.6E-12 78.8 8.5 78 4-83 5-93 (247)
110 TIGR01963 PHB_DH 3-hydroxybuty 98.7 5.5E-08 1.2E-12 80.0 7.7 75 5-81 2-86 (255)
111 PRK07074 short chain dehydroge 98.7 8.3E-08 1.8E-12 79.3 8.7 77 4-82 2-86 (257)
112 PRK08251 short chain dehydroge 98.7 9E-08 2E-12 78.6 8.7 80 4-83 2-91 (248)
113 PRK07453 protochlorophyllide o 98.7 6.3E-08 1.4E-12 83.0 8.1 77 4-82 6-92 (322)
114 PLN02253 xanthoxin dehydrogena 98.7 1.2E-07 2.5E-12 79.5 9.4 77 4-82 18-103 (280)
115 PRK06924 short chain dehydroge 98.7 5.1E-08 1.1E-12 80.2 7.2 69 5-74 2-70 (251)
116 PRK05875 short chain dehydroge 98.7 8.1E-08 1.8E-12 80.2 8.5 79 4-82 7-95 (276)
117 PRK06463 fabG 3-ketoacyl-(acyl 98.7 1.6E-07 3.4E-12 77.6 10.1 74 4-82 7-88 (255)
118 PRK07024 short chain dehydroge 98.7 1.1E-07 2.4E-12 78.7 9.0 77 4-82 2-87 (257)
119 PRK06935 2-deoxy-D-gluconate 3 98.7 1.3E-07 2.7E-12 78.3 9.3 79 4-82 15-100 (258)
120 PRK12746 short chain dehydroge 98.7 1E-07 2.2E-12 78.6 8.6 77 4-82 6-99 (254)
121 PRK07023 short chain dehydroge 98.7 7.4E-08 1.6E-12 79.0 7.6 64 5-72 2-65 (243)
122 PRK06200 2,3-dihydroxy-2,3-dih 98.7 1.3E-07 2.8E-12 78.5 9.2 77 4-82 6-89 (263)
123 PRK08226 short chain dehydroge 98.7 1.2E-07 2.5E-12 78.7 8.8 79 4-82 6-91 (263)
124 PRK08264 short chain dehydroge 98.7 1.9E-07 4.1E-12 76.1 10.0 74 4-83 6-83 (238)
125 PRK12743 oxidoreductase; Provi 98.7 1.5E-07 3.3E-12 77.8 9.5 80 4-83 2-90 (256)
126 PRK12939 short chain dehydroge 98.7 1.2E-07 2.7E-12 77.6 8.9 79 4-82 7-93 (250)
127 PF02719 Polysacc_synt_2: Poly 98.7 2.9E-08 6.2E-13 83.3 5.1 77 7-85 1-89 (293)
128 PRK07478 short chain dehydroge 98.7 1.3E-07 2.7E-12 78.1 8.9 77 4-82 6-92 (254)
129 TIGR03325 BphB_TodD cis-2,3-di 98.7 1.4E-07 3.1E-12 78.3 9.0 77 4-82 5-88 (262)
130 PRK05876 short chain dehydroge 98.6 1.1E-07 2.4E-12 79.8 8.4 78 4-83 6-93 (275)
131 PRK07067 sorbitol dehydrogenas 98.6 1.4E-07 3E-12 78.0 8.8 76 4-81 6-88 (257)
132 PRK07904 short chain dehydroge 98.6 1.8E-07 4E-12 77.4 9.5 76 4-79 8-93 (253)
133 PRK12827 short chain dehydroge 98.6 2.4E-07 5.2E-12 75.8 10.0 79 4-82 6-96 (249)
134 PRK06181 short chain dehydroge 98.6 1.5E-07 3.2E-12 78.1 8.7 78 5-82 2-87 (263)
135 PRK08278 short chain dehydroge 98.6 2.8E-07 6.1E-12 77.1 10.4 80 4-83 6-100 (273)
136 PRK06057 short chain dehydroge 98.6 2E-07 4.3E-12 77.0 9.4 75 4-82 7-88 (255)
137 PRK08213 gluconate 5-dehydroge 98.6 1.1E-07 2.4E-12 78.7 7.8 77 4-82 12-98 (259)
138 PRK06196 oxidoreductase; Provi 98.6 1.8E-07 3.8E-12 80.0 9.2 76 4-82 26-108 (315)
139 PRK05854 short chain dehydroge 98.6 1.3E-07 2.7E-12 81.0 8.3 79 4-82 14-102 (313)
140 PRK12481 2-deoxy-D-gluconate 3 98.6 1.8E-07 3.9E-12 77.3 9.0 78 4-82 8-92 (251)
141 PRK07063 short chain dehydroge 98.6 1.8E-07 3.8E-12 77.5 8.8 79 4-82 7-95 (260)
142 PRK05867 short chain dehydroge 98.6 1.5E-07 3.2E-12 77.7 8.3 76 4-81 9-94 (253)
143 PRK06947 glucose-1-dehydrogena 98.6 2.3E-07 5E-12 76.1 9.5 80 4-83 2-90 (248)
144 PRK07109 short chain dehydroge 98.6 1.9E-07 4E-12 80.7 9.2 79 4-82 8-94 (334)
145 PRK06077 fabG 3-ketoacyl-(acyl 98.6 2.7E-07 5.9E-12 75.8 9.8 80 4-83 6-94 (252)
146 PRK06483 dihydromonapterin red 98.6 1.4E-07 2.9E-12 77.1 7.9 74 4-82 2-83 (236)
147 PRK07775 short chain dehydroge 98.6 1.5E-07 3.2E-12 78.8 8.3 77 4-82 10-96 (274)
148 PRK06949 short chain dehydroge 98.6 1.8E-07 3.8E-12 77.2 8.5 77 4-82 9-95 (258)
149 PRK06398 aldose dehydrogenase; 98.6 3E-07 6.6E-12 76.2 10.0 69 4-82 6-81 (258)
150 PRK12935 acetoacetyl-CoA reduc 98.6 2.2E-07 4.7E-12 76.3 9.0 79 4-83 6-94 (247)
151 PRK05650 short chain dehydroge 98.6 2.1E-07 4.5E-12 77.6 9.0 76 5-82 1-86 (270)
152 PRK06197 short chain dehydroge 98.6 1.3E-07 2.8E-12 80.5 7.8 79 4-82 16-104 (306)
153 PRK08177 short chain dehydroge 98.6 2E-07 4.4E-12 75.6 8.7 74 5-82 2-80 (225)
154 PRK08017 oxidoreductase; Provi 98.6 1.3E-07 2.8E-12 77.9 7.6 75 5-84 3-85 (256)
155 PRK06841 short chain dehydroge 98.6 2.5E-07 5.5E-12 76.2 9.2 76 4-82 15-98 (255)
156 TIGR01832 kduD 2-deoxy-D-gluco 98.6 1.2E-07 2.5E-12 77.9 7.1 77 4-81 5-88 (248)
157 TIGR02197 heptose_epim ADP-L-g 98.6 1E-06 2.2E-11 74.7 13.2 67 7-79 1-72 (314)
158 PRK12744 short chain dehydroge 98.6 3.9E-07 8.6E-12 75.3 10.3 79 4-82 8-98 (257)
159 PRK07856 short chain dehydroge 98.6 1.7E-07 3.8E-12 77.2 8.1 71 4-81 6-83 (252)
160 PRK06500 short chain dehydroge 98.6 2.5E-07 5.5E-12 75.8 9.0 77 4-82 6-89 (249)
161 PRK06114 short chain dehydroge 98.6 2.7E-07 5.8E-12 76.3 9.2 78 4-82 8-95 (254)
162 PRK07576 short chain dehydroge 98.6 1.4E-07 3E-12 78.6 7.5 78 4-81 9-94 (264)
163 PRK07577 short chain dehydroge 98.6 3.3E-07 7.2E-12 74.5 9.6 71 1-82 1-77 (234)
164 PRK08277 D-mannonate oxidoredu 98.6 2E-07 4.3E-12 78.0 8.4 77 4-82 10-96 (278)
165 PRK12367 short chain dehydroge 98.6 3.8E-07 8.1E-12 75.4 9.7 76 4-83 14-89 (245)
166 PRK07825 short chain dehydroge 98.6 1.2E-07 2.6E-12 79.1 6.9 76 4-82 5-87 (273)
167 PRK06128 oxidoreductase; Provi 98.6 2.8E-07 6.1E-12 78.2 9.2 79 4-82 55-143 (300)
168 PRK07424 bifunctional sterol d 98.6 3.2E-07 6.9E-12 81.0 9.7 77 4-82 178-254 (406)
169 PRK08085 gluconate 5-dehydroge 98.6 2E-07 4.4E-12 76.9 8.0 77 4-82 9-95 (254)
170 PRK08339 short chain dehydroge 98.6 2.7E-07 5.8E-12 76.9 8.7 76 4-81 8-93 (263)
171 PRK07097 gluconate 5-dehydroge 98.6 2.9E-07 6.3E-12 76.5 9.0 77 4-82 10-96 (265)
172 PRK12936 3-ketoacyl-(acyl-carr 98.6 3.2E-07 6.9E-12 75.0 9.0 78 4-83 6-90 (245)
173 PRK12938 acetyacetyl-CoA reduc 98.6 3.9E-07 8.5E-12 74.7 9.5 81 1-83 1-91 (246)
174 PRK09072 short chain dehydroge 98.6 2.2E-07 4.7E-12 77.1 7.9 78 4-83 5-90 (263)
175 PRK06523 short chain dehydroge 98.6 2.3E-07 5E-12 76.7 8.0 71 4-82 9-86 (260)
176 PRK05884 short chain dehydroge 98.6 2.6E-07 5.6E-12 75.1 8.1 72 5-80 1-76 (223)
177 PRK08589 short chain dehydroge 98.6 1.5E-07 3.2E-12 78.8 6.8 76 4-82 6-91 (272)
178 PRK06123 short chain dehydroge 98.6 4.2E-07 9.1E-12 74.5 9.3 78 5-83 3-90 (248)
179 PRK06113 7-alpha-hydroxysteroi 98.6 2.8E-07 6.2E-12 76.1 8.3 79 4-82 11-97 (255)
180 PRK06701 short chain dehydroge 98.6 5E-07 1.1E-11 76.4 9.9 79 4-82 46-133 (290)
181 PRK06139 short chain dehydroge 98.6 3.6E-07 7.8E-12 78.8 9.1 78 4-83 7-94 (330)
182 PRK07060 short chain dehydroge 98.6 4.3E-07 9.3E-12 74.3 9.2 75 4-82 9-86 (245)
183 PRK12824 acetoacetyl-CoA reduc 98.6 3.9E-07 8.5E-12 74.4 8.9 77 5-82 3-89 (245)
184 COG3320 Putative dehydrogenase 98.5 7E-07 1.5E-11 76.7 10.4 77 5-81 1-95 (382)
185 PRK12384 sorbitol-6-phosphate 98.5 3.4E-07 7.4E-12 75.7 8.4 79 4-82 2-90 (259)
186 PRK05855 short chain dehydroge 98.5 1.8E-06 3.9E-11 79.3 14.0 80 4-83 315-402 (582)
187 PRK09730 putative NAD(P)-bindi 98.5 1.8E-07 3.9E-12 76.6 6.6 76 5-82 2-88 (247)
188 COG1089 Gmd GDP-D-mannose dehy 98.5 1.9E-06 4.1E-11 71.3 12.2 71 4-74 2-77 (345)
189 KOG1431 GDP-L-fucose synthetas 98.5 1.6E-06 3.4E-11 69.6 11.4 25 5-29 2-26 (315)
190 PRK12747 short chain dehydroge 98.5 5.5E-07 1.2E-11 74.2 9.3 82 1-83 1-98 (252)
191 TIGR02415 23BDH acetoin reduct 98.5 3.1E-07 6.6E-12 75.6 7.7 76 5-82 1-86 (254)
192 PRK12742 oxidoreductase; Provi 98.5 6.2E-07 1.3E-11 73.0 9.4 77 4-83 6-85 (237)
193 PRK06124 gluconate 5-dehydroge 98.5 2.2E-07 4.8E-12 76.7 6.7 76 4-81 11-96 (256)
194 PRK06198 short chain dehydroge 98.5 4.8E-07 1E-11 74.8 8.7 78 4-81 6-92 (260)
195 PRK08340 glucose-1-dehydrogena 98.5 2E-07 4.2E-12 77.3 6.3 76 5-82 1-85 (259)
196 PRK08220 2,3-dihydroxybenzoate 98.5 6.3E-07 1.4E-11 73.6 9.3 71 4-82 8-85 (252)
197 PRK08416 7-alpha-hydroxysteroi 98.5 2.9E-07 6.3E-12 76.4 7.3 77 4-81 8-95 (260)
198 PF07993 NAD_binding_4: Male s 98.5 3E-07 6.5E-12 76.1 7.1 73 9-81 1-95 (249)
199 PRK07677 short chain dehydroge 98.5 3.1E-07 6.8E-12 75.7 7.1 78 4-81 1-86 (252)
200 TIGR01179 galE UDP-glucose-4-e 98.5 5.2E-07 1.1E-11 76.7 8.6 74 6-81 1-78 (328)
201 PRK06171 sorbitol-6-phosphate 98.5 5.5E-07 1.2E-11 74.8 8.5 71 4-82 9-86 (266)
202 PRK07062 short chain dehydroge 98.5 3.1E-07 6.7E-12 76.2 7.0 79 4-82 8-96 (265)
203 PLN02996 fatty acyl-CoA reduct 98.5 5.3E-07 1.2E-11 81.8 8.9 79 4-82 11-121 (491)
204 PRK06953 short chain dehydroge 98.5 4.6E-07 9.9E-12 73.3 7.7 71 5-81 2-78 (222)
205 PRK07035 short chain dehydroge 98.5 3.5E-07 7.5E-12 75.3 6.9 77 4-82 8-94 (252)
206 PRK08936 glucose-1-dehydrogena 98.5 1.1E-06 2.5E-11 72.7 9.7 78 4-82 7-94 (261)
207 PRK07985 oxidoreductase; Provi 98.5 5.5E-07 1.2E-11 76.3 8.0 79 4-82 49-137 (294)
208 PRK05786 fabG 3-ketoacyl-(acyl 98.5 4.2E-07 9.2E-12 74.0 7.0 75 4-80 5-88 (238)
209 PLN02503 fatty acyl-CoA reduct 98.5 7.1E-07 1.5E-11 82.4 9.1 79 4-82 119-228 (605)
210 PRK06079 enoyl-(acyl carrier p 98.5 5.3E-07 1.1E-11 74.6 7.6 75 4-81 7-91 (252)
211 TIGR01829 AcAcCoA_reduct aceto 98.5 6.6E-07 1.4E-11 73.0 8.0 77 5-82 1-87 (242)
212 PRK07832 short chain dehydroge 98.5 7.3E-07 1.6E-11 74.4 8.4 76 5-82 1-87 (272)
213 PRK08309 short chain dehydroge 98.4 3.7E-07 7.9E-12 71.8 5.8 67 5-74 1-69 (177)
214 TIGR01830 3oxo_ACP_reduc 3-oxo 98.4 7.1E-07 1.5E-11 72.6 7.6 75 7-82 1-85 (239)
215 PRK08217 fabG 3-ketoacyl-(acyl 98.4 8.7E-07 1.9E-11 72.7 8.1 79 4-82 5-91 (253)
216 PRK07792 fabG 3-ketoacyl-(acyl 98.4 1.2E-06 2.6E-11 74.7 9.0 78 4-82 12-98 (306)
217 PRK08993 2-deoxy-D-gluconate 3 98.4 1.1E-06 2.4E-11 72.5 8.5 78 4-82 10-94 (253)
218 PRK09242 tropinone reductase; 98.4 9E-07 2E-11 73.1 7.8 78 4-83 9-98 (257)
219 PRK07201 short chain dehydroge 98.4 1.2E-06 2.6E-11 82.0 9.0 78 4-83 371-458 (657)
220 PRK06125 short chain dehydroge 98.4 1.4E-06 3.1E-11 72.1 8.4 76 4-81 7-89 (259)
221 PRK07831 short chain dehydroge 98.4 1.8E-06 3.9E-11 71.6 9.0 79 4-82 17-106 (262)
222 PLN02778 3,5-epimerase/4-reduc 98.4 1.1E-06 2.5E-11 74.6 7.8 57 4-83 9-67 (298)
223 PRK07791 short chain dehydroge 98.4 9.8E-07 2.1E-11 74.4 7.2 79 4-82 6-101 (286)
224 PRK08945 putative oxoacyl-(acy 98.4 1.2E-06 2.5E-11 72.0 7.6 80 3-82 11-101 (247)
225 PRK11150 rfaD ADP-L-glycero-D- 98.4 5.8E-07 1.3E-11 76.4 5.7 32 7-38 2-33 (308)
226 PRK08303 short chain dehydroge 98.4 1.6E-06 3.4E-11 74.0 8.2 78 4-81 8-103 (305)
227 PRK06550 fabG 3-ketoacyl-(acyl 98.4 1.6E-06 3.4E-11 70.6 7.8 71 4-82 5-76 (235)
228 TIGR01831 fabG_rel 3-oxoacyl-( 98.4 9.3E-07 2E-11 72.1 6.5 73 7-80 1-83 (239)
229 PRK09009 C factor cell-cell si 98.4 2.5E-06 5.4E-11 69.4 9.0 70 5-82 1-76 (235)
230 PRK05872 short chain dehydroge 98.4 1E-06 2.2E-11 74.7 6.8 77 4-82 9-94 (296)
231 PRK08594 enoyl-(acyl carrier p 98.3 1.5E-06 3.3E-11 72.1 7.5 78 4-81 7-95 (257)
232 KOG1205 Predicted dehydrogenas 98.3 3.6E-06 7.8E-11 70.4 9.6 81 4-84 12-102 (282)
233 COG1091 RfbD dTDP-4-dehydrorha 98.3 6.3E-06 1.4E-10 68.9 11.0 33 5-38 1-33 (281)
234 PRK07889 enoyl-(acyl carrier p 98.3 1.8E-06 3.8E-11 71.7 7.5 79 4-82 7-94 (256)
235 TIGR01289 LPOR light-dependent 98.3 1.2E-06 2.7E-11 74.9 6.8 77 4-82 3-90 (314)
236 PRK07069 short chain dehydroge 98.3 1.8E-06 3.9E-11 70.8 7.5 76 6-82 1-88 (251)
237 TIGR02632 RhaD_aldol-ADH rhamn 98.3 2.3E-06 4.9E-11 80.6 8.9 78 4-83 414-503 (676)
238 PRK07984 enoyl-(acyl carrier p 98.3 2.1E-06 4.5E-11 71.6 7.7 76 4-82 6-93 (262)
239 PRK08703 short chain dehydroge 98.3 2.9E-06 6.2E-11 69.3 8.4 77 4-82 6-96 (239)
240 PRK08862 short chain dehydroge 98.3 2E-06 4.4E-11 70.1 7.3 78 4-81 5-91 (227)
241 PRK12748 3-ketoacyl-(acyl-carr 98.3 3.9E-06 8.4E-11 69.3 8.9 79 4-82 5-104 (256)
242 PF00106 adh_short: short chai 98.3 1.1E-06 2.3E-11 67.7 5.2 76 5-80 1-87 (167)
243 PRK06505 enoyl-(acyl carrier p 98.3 2.1E-06 4.5E-11 71.9 7.2 79 3-82 6-94 (271)
244 PRK07041 short chain dehydroge 98.3 1.9E-06 4.2E-11 69.8 6.7 73 8-82 1-78 (230)
245 PRK06940 short chain dehydroge 98.3 3.9E-06 8.4E-11 70.4 8.5 76 4-83 2-86 (275)
246 PRK05599 hypothetical protein; 98.3 2.2E-06 4.8E-11 70.6 6.7 73 5-80 1-84 (246)
247 cd01078 NAD_bind_H4MPT_DH NADP 98.3 5.4E-06 1.2E-10 66.0 8.7 80 4-85 28-109 (194)
248 PRK06484 short chain dehydroge 98.2 4.5E-06 9.7E-11 76.1 8.9 77 4-82 269-352 (520)
249 PRK08415 enoyl-(acyl carrier p 98.2 2.6E-06 5.7E-11 71.5 6.8 78 4-82 5-92 (274)
250 PRK07533 enoyl-(acyl carrier p 98.2 4E-06 8.7E-11 69.6 7.8 78 4-82 10-97 (258)
251 TIGR02685 pter_reduc_Leis pter 98.2 2.6E-06 5.6E-11 70.9 6.7 77 5-82 2-93 (267)
252 PRK06484 short chain dehydroge 98.2 4.8E-06 1E-10 75.9 8.9 77 4-82 5-88 (520)
253 PRK06720 hypothetical protein; 98.2 4.5E-06 9.8E-11 65.1 7.5 77 4-80 16-100 (169)
254 PRK07370 enoyl-(acyl carrier p 98.2 3.7E-06 8.1E-11 69.8 7.3 79 4-82 6-96 (258)
255 PRK08324 short chain dehydroge 98.2 5.5E-06 1.2E-10 78.2 9.1 77 4-82 422-507 (681)
256 smart00822 PKS_KR This enzymat 98.2 7.4E-06 1.6E-10 62.8 8.0 77 5-81 1-89 (180)
257 PRK08690 enoyl-(acyl carrier p 98.2 3.3E-06 7.2E-11 70.2 6.4 77 4-83 6-94 (261)
258 PRK07578 short chain dehydroge 98.2 8.9E-06 1.9E-10 64.6 8.5 61 5-82 1-64 (199)
259 KOG1209 1-Acyl dihydroxyaceton 98.2 4.4E-06 9.5E-11 66.5 6.3 69 1-73 4-73 (289)
260 PRK06603 enoyl-(acyl carrier p 98.2 5.6E-06 1.2E-10 68.8 7.3 74 4-80 8-93 (260)
261 PF08659 KR: KR domain; Inter 98.2 7.1E-06 1.5E-10 64.6 7.5 69 6-74 2-75 (181)
262 PRK08159 enoyl-(acyl carrier p 98.2 5.1E-06 1.1E-10 69.6 6.9 78 4-82 10-97 (272)
263 COG1748 LYS9 Saccharopine dehy 98.2 9.5E-06 2.1E-10 70.8 8.6 72 4-79 1-74 (389)
264 PRK08261 fabG 3-ketoacyl-(acyl 98.2 1.4E-05 3E-10 71.7 9.9 77 4-82 210-293 (450)
265 PLN02725 GDP-4-keto-6-deoxyman 98.2 3.5E-06 7.5E-11 71.2 5.7 55 8-81 1-57 (306)
266 KOG1014 17 beta-hydroxysteroid 98.2 4.4E-06 9.4E-11 70.0 6.0 74 6-79 51-130 (312)
267 PLN02780 ketoreductase/ oxidor 98.1 1.1E-05 2.5E-10 69.2 8.7 80 4-83 53-142 (320)
268 COG3967 DltE Short-chain dehyd 98.1 9.6E-06 2.1E-10 64.2 6.6 66 4-72 5-70 (245)
269 COG1028 FabG Dehydrogenases wi 98.1 1.7E-05 3.6E-10 65.2 8.5 81 2-82 3-95 (251)
270 TIGR01500 sepiapter_red sepiap 98.1 8.7E-06 1.9E-10 67.3 6.5 66 6-73 2-76 (256)
271 PRK06997 enoyl-(acyl carrier p 98.1 1.3E-05 2.7E-10 66.7 7.2 78 4-82 6-93 (260)
272 KOG1208 Dehydrogenases with di 98.1 1E-05 2.2E-10 69.2 6.6 70 4-73 35-107 (314)
273 PRK12859 3-ketoacyl-(acyl-carr 98.0 3.2E-05 6.9E-10 64.0 8.3 78 4-81 6-104 (256)
274 KOG1201 Hydroxysteroid 17-beta 98.0 3.1E-05 6.8E-10 64.7 7.8 68 4-73 38-107 (300)
275 PLN00015 protochlorophyllide r 97.9 1.8E-05 4E-10 67.4 5.7 73 8-82 1-84 (308)
276 PRK09620 hypothetical protein; 97.9 5.3E-05 1.2E-09 61.9 7.9 75 3-82 2-96 (229)
277 KOG1611 Predicted short chain- 97.9 3.9E-05 8.5E-10 61.7 6.6 72 1-74 1-76 (249)
278 PLN02260 probable rhamnose bio 97.9 3.5E-05 7.6E-10 72.6 7.4 58 4-84 380-439 (668)
279 KOG4169 15-hydroxyprostaglandi 97.9 3.4E-05 7.4E-10 62.1 6.1 70 3-73 4-76 (261)
280 cd01336 MDH_cytoplasmic_cytoso 97.8 7.4E-05 1.6E-09 64.3 7.3 79 4-83 2-88 (325)
281 TIGR03443 alpha_am_amid L-amin 97.8 8.1E-05 1.8E-09 75.5 8.6 78 4-81 971-1069(1389)
282 PRK06732 phosphopantothenate-- 97.8 0.00013 2.8E-09 59.7 8.2 67 12-84 24-92 (229)
283 KOG0725 Reductases with broad 97.8 9.2E-05 2E-09 62.1 7.2 70 3-72 7-80 (270)
284 COG0569 TrkA K+ transport syst 97.8 0.00017 3.6E-09 58.9 8.5 70 5-80 1-73 (225)
285 PRK12548 shikimate 5-dehydroge 97.7 0.00022 4.7E-09 60.4 8.9 81 4-85 126-211 (289)
286 KOG1372 GDP-mannose 4,6 dehydr 97.7 0.00016 3.6E-09 58.9 6.9 70 5-74 29-105 (376)
287 PRK13656 trans-2-enoyl-CoA red 97.6 0.00036 7.9E-09 61.0 9.3 80 4-84 41-142 (398)
288 KOG1200 Mitochondrial/plastidi 97.6 0.00017 3.7E-09 56.9 6.3 68 4-73 14-83 (256)
289 KOG1210 Predicted 3-ketosphing 97.6 0.00052 1.1E-08 57.8 9.2 70 5-74 34-106 (331)
290 KOG1207 Diacetyl reductase/L-x 97.5 0.00022 4.8E-09 55.2 5.9 68 4-73 7-74 (245)
291 PF03435 Saccharop_dh: Sacchar 97.5 0.00032 7E-09 61.7 7.8 70 7-79 1-73 (386)
292 TIGR00715 precor6x_red precorr 97.5 0.00045 9.8E-09 57.4 8.2 68 5-78 1-70 (256)
293 PRK09496 trkA potassium transp 97.5 0.00048 1E-08 61.8 9.0 68 5-79 1-71 (453)
294 KOG1199 Short-chain alcohol de 97.5 0.00033 7.3E-09 54.2 6.1 71 3-75 8-78 (260)
295 PRK05671 aspartate-semialdehyd 97.5 0.00035 7.5E-09 60.4 6.7 32 1-32 1-32 (336)
296 KOG1203 Predicted dehydrogenas 97.5 0.00016 3.5E-09 63.4 4.7 38 2-39 77-114 (411)
297 PRK05579 bifunctional phosphop 97.4 0.00062 1.3E-08 60.2 8.3 69 4-82 188-276 (399)
298 KOG4039 Serine/threonine kinas 97.4 0.00052 1.1E-08 53.3 6.4 71 4-80 18-90 (238)
299 KOG1221 Acyl-CoA reductase [Li 97.4 0.00077 1.7E-08 60.2 8.3 78 4-81 12-114 (467)
300 PRK14874 aspartate-semialdehyd 97.4 0.00075 1.6E-08 58.3 8.2 65 5-80 2-70 (334)
301 PRK14982 acyl-ACP reductase; P 97.4 0.00031 6.7E-09 60.6 5.4 69 4-83 155-225 (340)
302 PLN02968 Probable N-acetyl-gam 97.4 0.00028 6.1E-09 62.0 5.1 35 4-38 38-73 (381)
303 PF02254 TrkA_N: TrkA-N domain 97.3 0.00097 2.1E-08 48.2 7.0 67 7-80 1-69 (116)
304 PF01488 Shikimate_DH: Shikima 97.1 0.0017 3.7E-08 48.6 6.7 75 3-85 11-87 (135)
305 KOG1478 3-keto sterol reductas 97.1 0.0024 5.3E-08 52.4 7.6 79 4-82 3-98 (341)
306 PF13561 adh_short_C2: Enoyl-( 97.1 0.00075 1.6E-08 55.2 4.8 60 11-72 1-64 (241)
307 PLN02730 enoyl-[acyl-carrier-p 97.0 0.0038 8.3E-08 53.2 8.3 33 4-37 9-43 (303)
308 PRK09496 trkA potassium transp 96.9 0.0043 9.4E-08 55.6 8.2 73 4-80 231-304 (453)
309 PLN00106 malate dehydrogenase 96.9 0.0052 1.1E-07 52.8 8.0 75 4-82 18-95 (323)
310 PRK14106 murD UDP-N-acetylmura 96.9 0.0042 9E-08 55.7 7.8 72 4-82 5-77 (450)
311 KOG2774 NAD dependent epimeras 96.9 0.01 2.2E-07 48.4 9.0 63 4-72 44-107 (366)
312 PF01118 Semialdhyde_dh: Semia 96.9 0.0087 1.9E-07 43.8 8.1 33 6-38 1-35 (121)
313 cd00704 MDH Malate dehydrogena 96.8 0.0075 1.6E-07 51.9 8.9 67 6-83 2-86 (323)
314 PRK00436 argC N-acetyl-gamma-g 96.8 0.003 6.5E-08 54.9 6.1 33 5-37 3-36 (343)
315 TIGR01296 asd_B aspartate-semi 96.8 0.0042 9.2E-08 53.8 7.0 64 6-80 1-68 (339)
316 PTZ00325 malate dehydrogenase; 96.8 0.005 1.1E-07 52.9 7.3 76 3-82 7-85 (321)
317 TIGR02813 omega_3_PfaA polyket 96.8 0.0028 6.1E-08 67.4 6.7 34 4-37 1997-2031(2582)
318 COG2085 Predicted dinucleotide 96.8 0.0047 1E-07 49.4 6.4 66 5-80 2-67 (211)
319 PRK10669 putative cation:proto 96.7 0.0056 1.2E-07 56.6 7.5 68 5-79 418-487 (558)
320 TIGR01915 npdG NADPH-dependent 96.6 0.0031 6.8E-08 51.1 4.7 34 5-38 1-34 (219)
321 KOG2733 Uncharacterized membra 96.6 0.0029 6.3E-08 54.3 4.6 70 6-77 7-87 (423)
322 PF03446 NAD_binding_2: NAD bi 96.6 0.025 5.5E-07 43.6 9.4 62 4-79 1-63 (163)
323 KOG1610 Corticosteroid 11-beta 96.6 0.011 2.4E-07 50.0 7.8 68 4-73 29-97 (322)
324 TIGR01758 MDH_euk_cyt malate d 96.6 0.013 2.9E-07 50.4 8.3 67 6-83 1-85 (324)
325 PRK03659 glutathione-regulated 96.4 0.011 2.3E-07 55.3 7.6 68 5-79 401-470 (601)
326 PRK05086 malate dehydrogenase; 96.4 0.011 2.4E-07 50.6 7.1 73 5-82 1-78 (312)
327 PRK05442 malate dehydrogenase; 96.4 0.018 3.9E-07 49.6 8.2 76 1-83 1-90 (326)
328 PLN02819 lysine-ketoglutarate 96.4 0.016 3.5E-07 56.9 8.6 72 4-79 569-654 (1042)
329 PLN02383 aspartate semialdehyd 96.3 0.021 4.4E-07 49.7 8.3 29 3-31 6-34 (344)
330 PRK06019 phosphoribosylaminoim 96.3 0.019 4.2E-07 50.3 8.1 65 5-77 3-67 (372)
331 PRK03562 glutathione-regulated 96.3 0.014 3E-07 54.7 7.6 68 5-79 401-470 (621)
332 PF04127 DFP: DNA / pantothena 96.3 0.021 4.6E-07 45.1 7.4 69 4-82 3-91 (185)
333 PF00070 Pyr_redox: Pyridine n 96.2 0.028 6.1E-07 37.7 6.9 34 6-40 1-34 (80)
334 TIGR00521 coaBC_dfp phosphopan 96.2 0.025 5.5E-07 49.9 8.3 67 4-80 185-272 (390)
335 COG0240 GpsA Glycerol-3-phosph 96.2 0.016 3.5E-07 49.6 6.6 72 4-79 1-77 (329)
336 PRK08664 aspartate-semialdehyd 96.1 0.0087 1.9E-07 52.1 5.0 37 1-38 1-38 (349)
337 PRK06849 hypothetical protein; 96.1 0.01 2.2E-07 52.3 5.4 38 1-38 1-38 (389)
338 PRK06718 precorrin-2 dehydroge 96.1 0.04 8.8E-07 44.1 8.3 34 4-38 10-43 (202)
339 PRK12475 thiamine/molybdopteri 96.1 0.043 9.2E-07 47.6 8.9 75 4-80 24-123 (338)
340 TIGR01850 argC N-acetyl-gamma- 96.1 0.013 2.8E-07 51.0 5.7 33 5-37 1-35 (346)
341 PRK07679 pyrroline-5-carboxyla 96.1 0.029 6.4E-07 47.1 7.7 36 1-38 1-40 (279)
342 PRK10537 voltage-gated potassi 96.0 0.031 6.7E-07 49.4 7.9 68 4-79 240-308 (393)
343 TIGR02114 coaB_strep phosphopa 96.0 0.011 2.4E-07 48.3 4.7 60 12-82 23-89 (227)
344 TIGR01470 cysG_Nterm siroheme 96.0 0.041 9E-07 44.2 7.9 66 4-80 9-76 (205)
345 PF03807 F420_oxidored: NADP o 95.9 0.041 8.8E-07 38.1 6.6 64 6-80 1-68 (96)
346 PRK04148 hypothetical protein; 95.8 0.021 4.5E-07 42.6 5.1 65 4-78 17-82 (134)
347 cd01065 NAD_bind_Shikimate_DH 95.8 0.042 9.2E-07 41.5 6.9 71 4-82 19-90 (155)
348 PRK06300 enoyl-(acyl carrier p 95.7 0.016 3.5E-07 49.3 4.8 34 4-37 8-43 (299)
349 cd01338 MDH_choloroplast_like 95.7 0.032 6.9E-07 48.1 6.6 77 4-83 2-88 (322)
350 PRK00094 gpsA NAD(P)H-dependen 95.7 0.028 6.1E-07 48.0 6.3 33 5-38 2-34 (325)
351 TIGR02853 spore_dpaA dipicolin 95.7 0.069 1.5E-06 45.2 8.3 66 4-80 151-216 (287)
352 PRK09288 purT phosphoribosylgl 95.6 0.079 1.7E-06 46.6 9.0 68 4-79 12-81 (395)
353 PRK11199 tyrA bifunctional cho 95.6 0.018 4E-07 50.6 4.7 35 4-38 98-132 (374)
354 PRK14618 NAD(P)H-dependent gly 95.6 0.024 5.2E-07 48.8 5.2 37 1-38 1-37 (328)
355 COG0026 PurK Phosphoribosylami 95.5 0.06 1.3E-06 46.7 7.5 64 5-76 2-65 (375)
356 PRK08040 putative semialdehyde 95.5 0.022 4.8E-07 49.3 4.9 37 1-37 1-40 (336)
357 KOG0747 Putative NAD+-dependen 95.5 0.03 6.6E-07 46.8 5.4 68 5-73 7-78 (331)
358 COG0002 ArgC Acetylglutamate s 95.5 0.034 7.4E-07 47.8 5.9 32 4-35 2-34 (349)
359 PRK07688 thiamine/molybdopteri 95.5 0.12 2.6E-06 44.8 9.3 75 4-80 24-123 (339)
360 PRK06249 2-dehydropantoate 2-r 95.5 0.028 6.1E-07 48.1 5.3 34 4-38 5-38 (313)
361 PRK07530 3-hydroxybutyryl-CoA 95.5 0.029 6.2E-07 47.5 5.3 37 1-38 1-37 (292)
362 TIGR00518 alaDH alanine dehydr 95.5 0.092 2E-06 46.1 8.6 72 4-81 167-238 (370)
363 PRK07634 pyrroline-5-carboxyla 95.5 0.073 1.6E-06 43.6 7.6 67 1-80 1-73 (245)
364 PRK06130 3-hydroxybutyryl-CoA 95.4 0.029 6.3E-07 47.8 5.4 37 1-38 1-37 (311)
365 PF00056 Ldh_1_N: lactate/mala 95.4 0.034 7.4E-07 41.9 5.1 74 5-83 1-79 (141)
366 PRK06444 prephenate dehydrogen 95.4 0.021 4.5E-07 45.6 4.0 28 5-32 1-28 (197)
367 TIGR01759 MalateDH-SF1 malate 95.4 0.076 1.7E-06 45.7 7.8 80 3-83 2-89 (323)
368 PLN02545 3-hydroxybutyryl-CoA 95.4 0.03 6.4E-07 47.5 5.2 37 1-38 1-37 (295)
369 TIGR00872 gnd_rel 6-phosphoglu 95.4 0.069 1.5E-06 45.4 7.5 65 5-79 1-65 (298)
370 PF00670 AdoHcyase_NAD: S-aden 95.4 0.081 1.7E-06 40.8 7.0 65 2-80 21-85 (162)
371 PRK11559 garR tartronate semia 95.3 0.067 1.5E-06 45.2 7.2 33 5-38 3-35 (296)
372 PRK08229 2-dehydropantoate 2-r 95.3 0.026 5.7E-07 48.7 4.8 33 5-38 3-35 (341)
373 PRK08655 prephenate dehydrogen 95.3 0.026 5.7E-07 50.6 4.8 34 5-38 1-34 (437)
374 PRK11880 pyrroline-5-carboxyla 95.2 0.065 1.4E-06 44.6 6.6 34 4-38 2-38 (267)
375 PRK06129 3-hydroxyacyl-CoA deh 95.2 0.034 7.3E-07 47.5 4.9 34 4-38 2-35 (308)
376 KOG1198 Zinc-binding oxidoredu 95.1 0.12 2.7E-06 44.9 8.3 69 4-79 158-231 (347)
377 PRK08306 dipicolinate synthase 95.1 0.13 2.8E-06 43.7 8.3 66 4-80 152-217 (296)
378 PRK06719 precorrin-2 dehydroge 95.1 0.042 9.2E-07 42.2 4.8 31 4-35 13-43 (157)
379 TIGR02356 adenyl_thiF thiazole 95.0 0.22 4.9E-06 39.8 9.0 75 4-80 21-118 (202)
380 PRK00066 ldh L-lactate dehydro 95.0 0.36 7.8E-06 41.4 10.7 72 4-83 6-83 (315)
381 PLN02948 phosphoribosylaminoim 95.0 0.15 3.2E-06 47.5 8.8 68 4-79 22-89 (577)
382 cd05294 LDH-like_MDH_nadp A la 95.0 0.048 1E-06 46.7 5.2 34 5-38 1-36 (309)
383 COG3268 Uncharacterized conser 95.0 0.068 1.5E-06 45.7 5.9 71 5-79 7-77 (382)
384 PRK00048 dihydrodipicolinate r 94.9 0.095 2.1E-06 43.6 6.8 32 5-36 2-34 (257)
385 TIGR01142 purT phosphoribosylg 94.9 0.16 3.5E-06 44.4 8.5 66 6-79 1-68 (380)
386 PRK07531 bifunctional 3-hydrox 94.9 0.044 9.6E-07 50.0 5.0 38 1-39 1-38 (495)
387 PRK06598 aspartate-semialdehyd 94.9 0.11 2.5E-06 45.4 7.3 32 5-36 2-37 (369)
388 cd01075 NAD_bind_Leu_Phe_Val_D 94.9 0.05 1.1E-06 43.5 4.8 34 4-38 28-61 (200)
389 PRK00258 aroE shikimate 5-dehy 94.8 0.054 1.2E-06 45.6 5.0 34 4-38 123-157 (278)
390 PRK05708 2-dehydropantoate 2-r 94.8 0.058 1.3E-06 46.0 5.2 33 5-38 3-35 (305)
391 PF01113 DapB_N: Dihydrodipico 94.7 0.055 1.2E-06 39.8 4.3 34 5-38 1-36 (124)
392 PRK14619 NAD(P)H-dependent gly 94.7 0.061 1.3E-06 45.9 5.2 36 3-39 3-38 (308)
393 TIGR03026 NDP-sugDHase nucleot 94.7 0.057 1.2E-06 48.0 5.1 33 5-38 1-33 (411)
394 PRK12749 quinate/shikimate deh 94.6 0.28 6E-06 41.6 9.0 81 4-85 124-208 (288)
395 PRK07819 3-hydroxybutyryl-CoA 94.6 0.066 1.4E-06 45.3 5.2 38 1-39 1-39 (286)
396 TIGR01772 MDH_euk_gproteo mala 94.6 0.21 4.5E-06 42.8 8.1 74 6-82 1-76 (312)
397 PRK06522 2-dehydropantoate 2-r 94.6 0.059 1.3E-06 45.5 4.8 33 5-38 1-33 (304)
398 PRK15461 NADH-dependent gamma- 94.5 0.13 2.7E-06 43.7 6.6 33 5-38 2-34 (296)
399 PF01210 NAD_Gly3P_dh_N: NAD-d 94.5 0.047 1E-06 41.8 3.6 70 6-80 1-76 (157)
400 KOG1494 NAD-dependent malate d 94.4 0.09 2E-06 44.0 5.3 77 4-83 28-106 (345)
401 cd01487 E1_ThiF_like E1_ThiF_l 94.4 0.28 6E-06 38.3 8.0 32 6-38 1-33 (174)
402 PLN02688 pyrroline-5-carboxyla 94.4 0.17 3.7E-06 42.0 7.2 32 5-37 1-37 (266)
403 PRK09599 6-phosphogluconate de 94.4 0.23 5E-06 42.2 8.1 33 5-38 1-33 (301)
404 TIGR01161 purK phosphoribosyla 94.4 0.16 3.5E-06 44.1 7.2 64 6-77 1-64 (352)
405 PF02737 3HCDH_N: 3-hydroxyacy 94.3 0.073 1.6E-06 41.8 4.5 33 6-39 1-33 (180)
406 PRK08163 salicylate hydroxylas 94.3 0.09 1.9E-06 46.1 5.5 38 1-39 1-38 (396)
407 PRK11064 wecC UDP-N-acetyl-D-m 94.3 0.067 1.5E-06 47.7 4.7 36 1-38 1-36 (415)
408 PRK12409 D-amino acid dehydrog 94.2 0.085 1.8E-06 46.6 5.2 33 5-38 2-34 (410)
409 PF13241 NAD_binding_7: Putati 94.2 0.058 1.3E-06 38.3 3.3 34 3-37 6-39 (103)
410 PRK08644 thiamine biosynthesis 94.2 0.36 7.7E-06 39.0 8.3 33 4-37 28-61 (212)
411 PRK06847 hypothetical protein; 94.1 0.1 2.2E-06 45.3 5.5 37 1-38 1-37 (375)
412 PRK12921 2-dehydropantoate 2-r 94.1 0.086 1.9E-06 44.6 4.8 31 5-36 1-31 (305)
413 COG0623 FabI Enoyl-[acyl-carri 94.1 0.34 7.4E-06 39.5 7.8 78 4-84 6-95 (259)
414 COG1893 ApbA Ketopantoate redu 94.0 0.15 3.1E-06 43.7 6.1 33 5-38 1-33 (307)
415 TIGR01505 tartro_sem_red 2-hyd 94.0 0.14 3.1E-06 43.2 5.9 61 6-79 1-61 (291)
416 TIGR00507 aroE shikimate 5-deh 94.0 0.1 2.2E-06 43.7 4.9 34 4-38 117-150 (270)
417 PRK05808 3-hydroxybutyryl-CoA 94.0 0.12 2.5E-06 43.6 5.3 36 1-38 1-36 (282)
418 PF01262 AlaDh_PNT_C: Alanine 94.0 0.25 5.5E-06 38.2 6.8 69 4-79 20-108 (168)
419 PRK12490 6-phosphogluconate de 93.8 2.4 5.2E-05 35.9 13.2 33 5-38 1-33 (299)
420 PRK05476 S-adenosyl-L-homocyst 93.8 0.27 5.9E-06 43.9 7.5 64 3-80 211-274 (425)
421 PF02558 ApbA: Ketopantoate re 93.8 0.12 2.5E-06 39.0 4.5 31 7-38 1-31 (151)
422 smart00859 Semialdhyde_dh Semi 93.7 0.16 3.5E-06 36.9 5.1 32 6-37 1-34 (122)
423 TIGR01809 Shik-DH-AROM shikima 93.7 0.27 5.8E-06 41.5 7.1 77 4-85 125-202 (282)
424 TIGR00978 asd_EA aspartate-sem 93.7 0.11 2.5E-06 45.0 4.9 32 5-36 1-33 (341)
425 cd00650 LDH_MDH_like NAD-depen 93.7 0.15 3.2E-06 42.5 5.4 74 7-82 1-79 (263)
426 PF03721 UDPG_MGDP_dh_N: UDP-g 93.7 0.091 2E-06 41.5 3.9 33 5-38 1-33 (185)
427 COG0373 HemA Glutamyl-tRNA red 93.7 0.19 4.1E-06 44.6 6.2 66 4-80 178-245 (414)
428 TIGR00465 ilvC ketol-acid redu 93.7 0.28 6E-06 42.1 7.1 64 4-80 3-66 (314)
429 cd01080 NAD_bind_m-THF_DH_Cycl 93.7 0.14 3E-06 39.8 4.8 51 4-80 44-94 (168)
430 cd05213 NAD_bind_Glutamyl_tRNA 93.6 0.25 5.5E-06 42.3 6.9 69 4-82 178-247 (311)
431 PF07991 IlvN: Acetohydroxy ac 93.6 0.35 7.6E-06 37.3 6.9 64 3-79 3-66 (165)
432 PRK08818 prephenate dehydrogen 93.6 0.12 2.6E-06 45.3 4.9 37 1-37 1-38 (370)
433 PLN00203 glutamyl-tRNA reducta 93.6 0.18 3.9E-06 46.3 6.2 72 4-82 266-338 (519)
434 COG0039 Mdh Malate/lactate deh 93.6 0.58 1.3E-05 40.0 8.8 72 5-82 1-78 (313)
435 PRK01438 murD UDP-N-acetylmura 93.6 0.35 7.5E-06 43.8 8.0 70 4-81 16-86 (480)
436 PTZ00075 Adenosylhomocysteinas 93.6 0.39 8.5E-06 43.4 8.1 64 3-80 253-316 (476)
437 PRK00711 D-amino acid dehydrog 93.6 0.12 2.5E-06 45.7 4.8 33 5-38 1-33 (416)
438 PRK08293 3-hydroxybutyryl-CoA 93.5 0.14 3.1E-06 43.1 5.2 35 4-39 3-37 (287)
439 KOG0172 Lysine-ketoglutarate r 93.5 0.2 4.3E-06 43.8 5.9 68 4-78 2-73 (445)
440 PRK05479 ketol-acid reductoiso 93.5 0.29 6.4E-06 42.2 7.0 64 4-80 17-80 (330)
441 PRK14620 NAD(P)H-dependent gly 93.5 0.13 2.7E-06 44.3 4.8 33 5-38 1-33 (326)
442 PRK06035 3-hydroxyacyl-CoA deh 93.5 0.15 3.2E-06 43.1 5.2 34 4-38 3-36 (291)
443 PLN02494 adenosylhomocysteinas 93.5 0.38 8.3E-06 43.4 7.8 63 3-79 253-315 (477)
444 PLN02520 bifunctional 3-dehydr 93.4 0.12 2.5E-06 47.7 4.7 34 4-38 379-412 (529)
445 COG0604 Qor NADPH:quinone redu 93.4 0.32 7E-06 41.9 7.2 34 4-37 143-176 (326)
446 PRK06545 prephenate dehydrogen 93.4 0.3 6.5E-06 42.7 7.1 67 5-80 1-67 (359)
447 PRK08057 cobalt-precorrin-6x r 93.4 0.33 7.2E-06 40.2 6.9 61 4-73 2-63 (248)
448 TIGR01035 hemA glutamyl-tRNA r 93.4 0.33 7.2E-06 43.3 7.4 69 4-82 180-249 (417)
449 PRK05562 precorrin-2 dehydroge 93.4 0.68 1.5E-05 37.7 8.6 66 4-80 25-92 (223)
450 COG0665 DadA Glycine/D-amino a 93.4 0.15 3.2E-06 44.4 5.2 37 1-38 1-37 (387)
451 PRK07066 3-hydroxybutyryl-CoA 93.4 0.15 3.3E-06 43.8 5.0 34 4-38 7-40 (321)
452 PRK13940 glutamyl-tRNA reducta 93.4 0.31 6.7E-06 43.5 7.1 68 4-81 181-250 (414)
453 PRK11863 N-acetyl-gamma-glutam 93.3 0.14 3E-06 43.9 4.7 33 4-36 2-35 (313)
454 cd01486 Apg7 Apg7 is an E1-lik 93.3 0.77 1.7E-05 39.1 9.0 30 6-36 1-31 (307)
455 PRK09260 3-hydroxybutyryl-CoA 93.2 0.17 3.6E-06 42.8 5.0 34 5-39 2-35 (288)
456 PRK14027 quinate/shikimate deh 93.1 0.38 8.2E-06 40.7 7.0 34 4-38 127-161 (283)
457 PRK07417 arogenate dehydrogena 93.1 0.14 3.1E-06 43.0 4.5 33 5-38 1-33 (279)
458 PRK15469 ghrA bifunctional gly 93.1 0.51 1.1E-05 40.4 7.8 61 4-79 136-196 (312)
459 TIGR00936 ahcY adenosylhomocys 93.0 0.46 9.9E-06 42.2 7.6 35 3-38 194-228 (406)
460 TIGR02354 thiF_fam2 thiamine b 93.0 0.16 3.4E-06 40.7 4.4 33 4-37 21-54 (200)
461 PRK08762 molybdopterin biosynt 93.0 0.77 1.7E-05 40.4 9.1 33 4-37 135-168 (376)
462 PRK07236 hypothetical protein; 93.0 0.2 4.4E-06 43.9 5.5 34 4-38 6-39 (386)
463 PRK00045 hemA glutamyl-tRNA re 92.9 0.34 7.4E-06 43.3 6.7 69 4-82 182-251 (423)
464 PLN02928 oxidoreductase family 92.9 0.38 8.1E-06 41.9 6.8 73 4-79 159-232 (347)
465 cd05295 MDH_like Malate dehydr 92.8 0.19 4.2E-06 45.1 5.0 26 1-26 120-145 (452)
466 cd01337 MDH_glyoxysomal_mitoch 92.8 0.19 4.1E-06 43.0 4.8 75 5-82 1-77 (310)
467 TIGR00877 purD phosphoribosyla 92.7 0.43 9.3E-06 42.5 7.2 68 5-79 1-70 (423)
468 PRK14192 bifunctional 5,10-met 92.7 0.2 4.4E-06 42.3 4.8 35 3-37 158-192 (283)
469 PRK06728 aspartate-semialdehyd 92.7 0.25 5.5E-06 42.9 5.5 37 1-37 1-42 (347)
470 cd00401 AdoHcyase S-adenosyl-L 92.7 0.62 1.3E-05 41.5 8.0 63 4-80 202-264 (413)
471 COG0289 DapB Dihydrodipicolina 92.6 0.61 1.3E-05 38.7 7.3 36 4-39 2-39 (266)
472 COG0169 AroE Shikimate 5-dehyd 92.6 0.35 7.5E-06 40.9 6.0 35 4-39 126-161 (283)
473 PTZ00082 L-lactate dehydrogena 92.6 0.27 5.8E-06 42.3 5.5 38 1-39 3-41 (321)
474 PF02826 2-Hacid_dh_C: D-isome 92.6 0.29 6.3E-06 38.2 5.3 62 4-79 36-97 (178)
475 PRK02472 murD UDP-N-acetylmura 92.5 0.16 3.5E-06 45.5 4.3 34 4-38 5-38 (447)
476 cd05191 NAD_bind_amino_acid_DH 92.5 0.3 6.5E-06 33.3 4.7 32 4-36 23-55 (86)
477 PRK02705 murD UDP-N-acetylmura 92.3 0.77 1.7E-05 41.3 8.4 74 6-81 2-76 (459)
478 PF00899 ThiF: ThiF family; I 92.3 0.24 5.3E-06 36.7 4.4 33 4-37 2-35 (135)
479 PRK14194 bifunctional 5,10-met 92.3 0.23 4.9E-06 42.3 4.6 34 4-37 159-192 (301)
480 PTZ00142 6-phosphogluconate de 92.3 3.3 7.3E-05 37.6 12.3 68 6-79 3-72 (470)
481 PRK14188 bifunctional 5,10-met 92.3 0.24 5.2E-06 42.1 4.6 32 4-35 158-189 (296)
482 cd08259 Zn_ADH5 Alcohol dehydr 92.1 0.29 6.3E-06 41.4 5.2 35 4-38 163-197 (332)
483 PRK04308 murD UDP-N-acetylmura 92.1 1.1 2.3E-05 40.3 8.9 72 4-82 5-76 (445)
484 PRK12549 shikimate 5-dehydroge 92.1 0.26 5.6E-06 41.7 4.6 74 4-85 127-204 (284)
485 COG0287 TyrA Prephenate dehydr 92.0 0.32 6.8E-06 41.1 5.1 35 4-39 3-37 (279)
486 PRK07574 formate dehydrogenase 92.0 0.29 6.2E-06 43.2 5.1 63 4-79 192-254 (385)
487 PRK07208 hypothetical protein; 92.0 0.3 6.5E-06 44.1 5.4 37 1-38 1-37 (479)
488 PRK13403 ketol-acid reductoiso 92.0 0.71 1.5E-05 39.7 7.2 62 4-79 16-77 (335)
489 PLN02256 arogenate dehydrogena 92.0 0.28 6.1E-06 41.9 4.9 34 4-38 36-69 (304)
490 KOG0023 Alcohol dehydrogenase, 91.9 0.85 1.8E-05 39.1 7.4 70 2-76 180-249 (360)
491 PF02670 DXP_reductoisom: 1-de 91.8 0.48 1E-05 35.1 5.3 32 7-38 1-34 (129)
492 PF10727 Rossmann-like: Rossma 91.8 0.15 3.2E-06 37.8 2.6 31 4-35 10-40 (127)
493 PRK14175 bifunctional 5,10-met 91.8 0.36 7.9E-06 40.8 5.2 51 4-80 158-208 (286)
494 PRK11259 solA N-methyltryptoph 91.8 0.29 6.4E-06 42.5 4.9 33 5-38 4-36 (376)
495 COG1004 Ugd Predicted UDP-gluc 91.7 0.66 1.4E-05 40.8 6.8 34 5-39 1-34 (414)
496 PF02571 CbiJ: Precorrin-6x re 91.6 0.9 1.9E-05 37.7 7.3 64 5-73 1-64 (249)
497 PLN02353 probable UDP-glucose 91.6 0.41 8.8E-06 43.5 5.6 34 4-38 1-36 (473)
498 PLN02602 lactate dehydrogenase 91.5 2.3 5E-05 37.1 10.0 72 5-83 38-115 (350)
499 KOG4288 Predicted oxidoreducta 91.4 0.21 4.6E-06 40.7 3.2 34 5-38 3-36 (283)
500 KOG2304 3-hydroxyacyl-CoA dehy 91.3 0.27 5.8E-06 40.1 3.7 38 1-39 8-45 (298)
No 1
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=99.77 E-value=1.1e-17 Score=140.77 Aligned_cols=67 Identities=15% Similarity=0.118 Sum_probs=56.6
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHH------cc-CCEEE
Q 043777 6 NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAV------KQ-VDVRF 78 (231)
Q Consensus 6 ~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al------~~-~d~~f 78 (231)
+|+||||||++|++++++|+++|++|++++|+.+. . . ..++..+.+|++|++++..++ ++ +|.+|
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~---~---~--~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~ 72 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSS---S---A--GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVY 72 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcc---c---c--CCCCccccccCCCHHHHHHHHhcccCcCCceeEEE
Confidence 48999999999999999999999999999998642 1 0 146677889999999999999 56 88887
Q ss_pred Ec
Q 043777 79 IP 80 (231)
Q Consensus 79 ~p 80 (231)
+.
T Consensus 73 ~~ 74 (285)
T TIGR03649 73 LV 74 (285)
T ss_pred Ee
Confidence 63
No 2
>CHL00194 ycf39 Ycf39; Provisional
Probab=99.74 E-value=9e-17 Score=137.50 Aligned_cols=70 Identities=26% Similarity=0.325 Sum_probs=60.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFIP 80 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~p 80 (231)
|+|+|||||||+|++++++|+++||+|++++|+.+. .. .+. .+++++.+|++|++++.++++++|++|+.
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~---~~---~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~ 71 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRK---AS---FLKEWGAELVYGDLSLPETLPPSFKGVTAIIDA 71 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHH---hh---hHhhcCCEEEECCCCCHHHHHHHHCCCCEEEEC
Confidence 589999999999999999999999999999997531 11 122 57899999999999999999999998874
No 3
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=99.71 E-value=1.2e-16 Score=130.80 Aligned_cols=69 Identities=30% Similarity=0.356 Sum_probs=57.5
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777 7 VLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFI 79 (231)
Q Consensus 7 ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~ 79 (231)
|+|+||||.+|++++++|++.+++|++++|+.+ .+..+.+. .+++++.+|+.|.+++.++++++|.+|+
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~----~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~ 70 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPS----SDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFS 70 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSH----HHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEE
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccc----hhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEe
Confidence 799999999999999999999999999999863 22233444 7899999999999999999999998443
No 4
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=99.67 E-value=1.8e-15 Score=127.42 Aligned_cols=77 Identities=25% Similarity=0.221 Sum_probs=66.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQVDVRFIP 80 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~~d~~f~p 80 (231)
+++|+|||||||||++|++.|+++||.|++.+|++....+.+++..++ .+..++.+|+.|++++.+++++||.+||.
T Consensus 6 ~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH~ 85 (327)
T KOG1502|consen 6 GKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFHT 85 (327)
T ss_pred CcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEEe
Confidence 589999999999999999999999999999999986422334555554 45889999999999999999999999983
No 5
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=99.55 E-value=4e-13 Score=118.18 Aligned_cols=78 Identities=26% Similarity=0.253 Sum_probs=61.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch---hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc----cC
Q 043777 2 AGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF---NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK----QV 74 (231)
Q Consensus 2 ~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~---~~~~~~~~~~~v~~~~~D~~d~~~l~~al~----~~ 74 (231)
.++++|+||||||+||++++++|+++|++|++++|+.+... ..........+++++.+|++|.+++.++++ ++
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~ 137 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPV 137 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCC
Confidence 34679999999999999999999999999999999764210 000001111578899999999999999998 48
Q ss_pred CEEEE
Q 043777 75 DVRFI 79 (231)
Q Consensus 75 d~~f~ 79 (231)
|++++
T Consensus 138 D~Vi~ 142 (390)
T PLN02657 138 DVVVS 142 (390)
T ss_pred cEEEE
Confidence 99886
No 6
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=99.40 E-value=6.4e-12 Score=104.08 Aligned_cols=70 Identities=27% Similarity=0.258 Sum_probs=56.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHcc--CCEEEE
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQ--VDVRFI 79 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~--~d~~f~ 79 (231)
|+||||||+|+||+|.+.+|+++|++|++++.-...+. + .+. ...+++++|+.|.+.|.+.++. +|.++|
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~--~---~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViH 73 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHK--I---ALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVH 73 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCH--H---HhhhccCceEEeccccHHHHHHHHHhcCCCEEEE
Confidence 57999999999999999999999999999988654321 1 122 1268999999999999999986 666443
No 7
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=99.32 E-value=7.2e-11 Score=100.77 Aligned_cols=70 Identities=31% Similarity=0.306 Sum_probs=59.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFIP 80 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~p 80 (231)
|+|+||||+|+||+++++.|+++|++|++++|+.... ..+. .++.++.+|++|.+++.++++++|++++.
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~------~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~ 71 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDR------RNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHV 71 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccc------cccccCCceEEEeeCCCHHHHHHHHhCCCEEEEe
Confidence 5799999999999999999999999999999975321 1122 46889999999999999999999987763
No 8
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=99.26 E-value=1.8e-10 Score=99.79 Aligned_cols=78 Identities=17% Similarity=0.051 Sum_probs=60.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhh---hc-CCcEEEEEcCCCHHHHHHHHccCCEE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRV---FH-SGVFDYWGLLEDEKSLLEAVKQVDVR 77 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~---~~-~~v~~~~~D~~d~~~l~~al~~~d~~ 77 (231)
+|+|+|||||||||++|+++|+++|++|++++|...... ....... .. .++.++.+|++|.+.+.++++++|++
T Consensus 15 ~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d~V 94 (348)
T PRK15181 15 PKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYV 94 (348)
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCCEE
Confidence 579999999999999999999999999999998643211 0100000 11 35778899999999999999999997
Q ss_pred EEcc
Q 043777 78 FIPS 81 (231)
Q Consensus 78 f~ps 81 (231)
+|-+
T Consensus 95 iHlA 98 (348)
T PRK15181 95 LHQA 98 (348)
T ss_pred EECc
Confidence 7743
No 9
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.26 E-value=2.5e-10 Score=94.96 Aligned_cols=69 Identities=32% Similarity=0.410 Sum_probs=59.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFI 79 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ 79 (231)
|+|+||||||++|++++++|++.|++|++++|+... .. .+..++.+..+|+.+...+..++++++.+++
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~---~~---~~~~~v~~~~~d~~~~~~l~~a~~G~~~~~~ 69 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEA---AA---ALAGGVEVVLGDLRDPKSLVAGAKGVDGVLL 69 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHH---HH---hhcCCcEEEEeccCCHhHHHHHhccccEEEE
Confidence 579999999999999999999999999999998642 11 1116889999999999999999999998665
No 10
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.24 E-value=2.9e-11 Score=101.87 Aligned_cols=110 Identities=25% Similarity=0.265 Sum_probs=74.0
Q ss_pred EEEcCCChhHHHHHHHHHhCC--CCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHccCCEEEEcccC
Q 043777 8 LVIGAIGRIGYHFTRRSIEYG--HPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQVDVRFIPSEY 83 (231)
Q Consensus 8 lVtGatG~iG~~i~~~L~~~g--~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~~ 83 (231)
|||||+||+|++|+++|+++| ++|++++|..... ....+. ....++++|++|++++.++++++|++||.+..
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~----~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~ 76 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPK----FLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAP 76 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccc----cchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcc
Confidence 699999999999999999999 7899888875421 111122 33348999999999999999999999996443
Q ss_pred CCcc-------eeechhHHHH-HHHhhcCccccCceEEEeeeeeeee
Q 043777 84 GAGV-------FVKDTDVAAF-TINALDDPRTLNKLLHLREISHTFN 122 (231)
Q Consensus 84 g~~~-------~~~~~di~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (231)
.... +...+--|+- .+.++. .....+.+++++.+..+.
T Consensus 77 ~~~~~~~~~~~~~~vNV~GT~nvl~aa~-~~~VkrlVytSS~~vv~~ 122 (280)
T PF01073_consen 77 VPPWGDYPPEEYYKVNVDGTRNVLEAAR-KAGVKRLVYTSSISVVFD 122 (280)
T ss_pred ccccCcccHHHHHHHHHHHHHHHHHHHH-HcCCCEEEEEcCcceeEe
Confidence 2110 1111111221 222222 235778899988877765
No 11
>PLN00016 RNA-binding protein; Provisional
Probab=99.22 E-value=1.5e-10 Score=101.44 Aligned_cols=75 Identities=27% Similarity=0.399 Sum_probs=51.5
Q ss_pred CCeEEEE----cCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhh-----hhhhhhc-CCcEEEEEcCCCHHHHHHHHcc
Q 043777 4 KSNVLVI----GAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNF-----SLLRVFH-SGVFDYWGLLEDEKSLLEAVKQ 73 (231)
Q Consensus 4 ~~~ilVt----GatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~-----~~~~~~~-~~v~~~~~D~~d~~~l~~al~~ 73 (231)
+++|||| |||||||++++++|+++||+|++++|+....... .....+. .+++++.+|+.|.+.+. ...+
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~~-~~~~ 130 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSKV-AGAG 130 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhhh-ccCC
Confidence 4789999 9999999999999999999999999986421000 0011222 46888899987733222 1235
Q ss_pred CCEEEE
Q 043777 74 VDVRFI 79 (231)
Q Consensus 74 ~d~~f~ 79 (231)
+|++++
T Consensus 131 ~d~Vi~ 136 (378)
T PLN00016 131 FDVVYD 136 (378)
T ss_pred ccEEEe
Confidence 676554
No 12
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=99.14 E-value=2.7e-10 Score=89.47 Aligned_cols=97 Identities=27% Similarity=0.318 Sum_probs=71.6
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEcccCCCc
Q 043777 7 VLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSEYGAG 86 (231)
Q Consensus 7 ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~~g~~ 86 (231)
|+|+||||++|+.++++|+++|++|++++|+.++ .+ . ..+++++.+|+.|++++.++++++|++|+...-...
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~---~~---~-~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~ 73 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSK---AE---D-SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPK 73 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGG---HH---H-CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTT
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchh---cc---c-ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcc
Confidence 7999999999999999999999999999998642 11 1 478999999999999999999999999875422111
Q ss_pred ceeechhHHHHHHHhhcCccccCceEEEe
Q 043777 87 VFVKDTDVAAFTINALDDPRTLNKLLHLR 115 (231)
Q Consensus 87 ~~~~~~di~~~~~~~~~~~~~~~~~~~~~ 115 (231)
..+.....+.++... ...+.++++
T Consensus 74 ----~~~~~~~~~~a~~~~-~~~~~v~~s 97 (183)
T PF13460_consen 74 ----DVDAAKNIIEAAKKA-GVKRVVYLS 97 (183)
T ss_dssp ----HHHHHHHHHHHHHHT-TSSEEEEEE
T ss_pred ----ccccccccccccccc-ccccceeee
Confidence 133344444444332 244566655
No 13
>PLN02214 cinnamoyl-CoA reductase
Probab=99.11 E-value=6.1e-10 Score=96.38 Aligned_cols=78 Identities=22% Similarity=0.185 Sum_probs=61.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQVDVRFIP 80 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~~d~~f~p 80 (231)
+|+|+||||+||||++++++|+++|++|++++|+..... ...+..+. .++.++.+|++|.+++.++++++|++|+.
T Consensus 10 ~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~ 88 (342)
T PLN02214 10 GKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPK-NTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFHT 88 (342)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhh-HHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEEe
Confidence 578999999999999999999999999999999753211 11111221 35778899999999999999999999886
Q ss_pred cc
Q 043777 81 SE 82 (231)
Q Consensus 81 s~ 82 (231)
..
T Consensus 89 A~ 90 (342)
T PLN02214 89 AS 90 (342)
T ss_pred cC
Confidence 53
No 14
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.11 E-value=3.8e-10 Score=97.27 Aligned_cols=79 Identities=20% Similarity=0.267 Sum_probs=62.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQVDVRFIPS 81 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~~d~~f~ps 81 (231)
+++|+||||+||||++++++|+++|++|+++.|+............+. .++.++.+|++|.+++.++++++|++|+.+
T Consensus 9 ~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A 88 (338)
T PLN00198 9 KKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFHVA 88 (338)
T ss_pred CCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEEeC
Confidence 578999999999999999999999999999998754211111111122 257889999999999999999999999855
Q ss_pred c
Q 043777 82 E 82 (231)
Q Consensus 82 ~ 82 (231)
.
T Consensus 89 ~ 89 (338)
T PLN00198 89 T 89 (338)
T ss_pred C
Confidence 4
No 15
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.11 E-value=2.9e-10 Score=97.09 Aligned_cols=79 Identities=20% Similarity=0.165 Sum_probs=62.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVKQVDVRFIP 80 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~~~d~~f~p 80 (231)
.++|+|||||||||++++++|+++|++|++++|+.........+... ..++.++.+|++|++.+.++++++|++||.
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 83 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFHT 83 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEEe
Confidence 57899999999999999999999999999999975421111111111 136788999999999999999999999885
Q ss_pred cc
Q 043777 81 SE 82 (231)
Q Consensus 81 s~ 82 (231)
+.
T Consensus 84 A~ 85 (322)
T PLN02662 84 AS 85 (322)
T ss_pred CC
Confidence 43
No 16
>PLN02583 cinnamoyl-CoA reductase
Probab=99.10 E-value=5e-10 Score=94.98 Aligned_cols=78 Identities=19% Similarity=0.181 Sum_probs=61.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777 3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQVDVRFI 79 (231)
Q Consensus 3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~~d~~f~ 79 (231)
++++|+||||||+||++++++|+++|++|+++.|+.......+.+..+. .++.++.+|++|.+++.+++.++|.+++
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~ 84 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFC 84 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 3578999999999999999999999999999999642211111122221 3578899999999999999999999886
Q ss_pred c
Q 043777 80 P 80 (231)
Q Consensus 80 p 80 (231)
.
T Consensus 85 ~ 85 (297)
T PLN02583 85 C 85 (297)
T ss_pred e
Confidence 3
No 17
>PLN02427 UDP-apiose/xylose synthase
Probab=99.07 E-value=5.6e-10 Score=98.05 Aligned_cols=78 Identities=19% Similarity=0.149 Sum_probs=61.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhC-CCCEEEEEcCCCCchhhhhhh----hhcCCcEEEEEcCCCHHHHHHHHccCCEEE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEY-GHPKFALIRDSASNFNFSLLR----VFHSGVFDYWGLLEDEKSLLEAVKQVDVRF 78 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~-g~~v~~~~R~~~~~~~~~~~~----~~~~~v~~~~~D~~d~~~l~~al~~~d~~f 78 (231)
.|+|+|||||||||++++++|+++ |++|++++|..... ..... ....+++++.+|++|.+.+.++++++|++|
T Consensus 14 ~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~--~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~Vi 91 (386)
T PLN02427 14 PLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKI--KHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLTI 91 (386)
T ss_pred CcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhh--hhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEEE
Confidence 578999999999999999999998 59999998864321 11110 011468899999999999999999999999
Q ss_pred EcccC
Q 043777 79 IPSEY 83 (231)
Q Consensus 79 ~ps~~ 83 (231)
|-+..
T Consensus 92 HlAa~ 96 (386)
T PLN02427 92 NLAAI 96 (386)
T ss_pred Ecccc
Confidence 86543
No 18
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=99.06 E-value=3.7e-09 Score=88.82 Aligned_cols=32 Identities=25% Similarity=0.418 Sum_probs=30.4
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCCCEEEEEcC
Q 043777 6 NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRD 37 (231)
Q Consensus 6 ~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~ 37 (231)
+|+||||||+||++++++|+++|++|+++.|.
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~ 32 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS 32 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc
Confidence 58999999999999999999999999999886
No 19
>PLN02206 UDP-glucuronate decarboxylase
Probab=99.06 E-value=4.6e-09 Score=93.93 Aligned_cols=70 Identities=16% Similarity=0.152 Sum_probs=48.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFI 79 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~ 79 (231)
.|+|+|||||||||++|+++|+++|++|++++|...... ......+. .+++++.+|+.+. ++.++|++||
T Consensus 119 ~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~-~~~~~~~~~~~~~~i~~D~~~~-----~l~~~D~ViH 189 (442)
T PLN02206 119 GLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRK-ENVMHHFSNPNFELIRHDVVEP-----ILLEVDQIYH 189 (442)
T ss_pred CCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccch-hhhhhhccCCceEEEECCccCh-----hhcCCCEEEE
Confidence 589999999999999999999999999999987532111 11111122 4566677776554 2345666665
No 20
>PLN02650 dihydroflavonol-4-reductase
Probab=99.06 E-value=7.8e-10 Score=95.85 Aligned_cols=80 Identities=26% Similarity=0.208 Sum_probs=61.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777 3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQVDVRFI 79 (231)
Q Consensus 3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~~d~~f~ 79 (231)
.+++|||||||||||++++++|+++|++|++++|+.........+.... ..+.++.+|++|.+.+.++++++|.++|
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH 83 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFH 83 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEE
Confidence 3689999999999999999999999999999999753211000010111 2477899999999999999999999888
Q ss_pred ccc
Q 043777 80 PSE 82 (231)
Q Consensus 80 ps~ 82 (231)
.+.
T Consensus 84 ~A~ 86 (351)
T PLN02650 84 VAT 86 (351)
T ss_pred eCC
Confidence 553
No 21
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=99.06 E-value=6.7e-10 Score=97.16 Aligned_cols=76 Identities=22% Similarity=0.060 Sum_probs=60.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777 1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP 80 (231)
Q Consensus 1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p 80 (231)
|+.+|+|+|||||||||+++++.|+++||+|++++|..... .......+.++.+|++|.+.+..+++++|++|+-
T Consensus 18 ~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~-----~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~ 92 (370)
T PLN02695 18 PSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH-----MSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFNL 92 (370)
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc-----cccccccceEEECCCCCHHHHHHHHhCCCEEEEc
Confidence 44578999999999999999999999999999999864210 0110123567889999999999999999998875
Q ss_pred c
Q 043777 81 S 81 (231)
Q Consensus 81 s 81 (231)
.
T Consensus 93 A 93 (370)
T PLN02695 93 A 93 (370)
T ss_pred c
Confidence 4
No 22
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.05 E-value=1.1e-09 Score=94.20 Aligned_cols=81 Identities=21% Similarity=0.323 Sum_probs=63.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCC--CCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEE
Q 043777 1 MAGKSNVLVIGAIGRIGYHFTRRSIEYG--HPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVR 77 (231)
Q Consensus 1 M~~~~~ilVtGatG~iG~~i~~~L~~~g--~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~ 77 (231)
|.++|+|+||||+|+||++++++|+++| +.|++++|+.... ......+. .++.++.+|++|.+.+.++++++|++
T Consensus 1 ~~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~--~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~V 78 (324)
T TIGR03589 1 MFNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQ--WEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYV 78 (324)
T ss_pred CcCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHH--HHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEE
Confidence 4557899999999999999999999986 7888888864311 11111222 46788999999999999999999999
Q ss_pred EEcccC
Q 043777 78 FIPSEY 83 (231)
Q Consensus 78 f~ps~~ 83 (231)
++....
T Consensus 79 ih~Ag~ 84 (324)
T TIGR03589 79 VHAAAL 84 (324)
T ss_pred EECccc
Confidence 986543
No 23
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=99.05 E-value=5.1e-09 Score=93.46 Aligned_cols=70 Identities=16% Similarity=0.174 Sum_probs=47.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFI 79 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~ 79 (231)
.|||+|||||||||++|+++|+++|++|++++|...... ........ .++.++.+|+.+. ++.++|++||
T Consensus 120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~-~~~~~~~~~~~~~~~~~Di~~~-----~~~~~D~ViH 190 (436)
T PLN02166 120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRK-ENLVHLFGNPRFELIRHDVVEP-----ILLEVDQIYH 190 (436)
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccH-hHhhhhccCCceEEEECccccc-----cccCCCEEEE
Confidence 479999999999999999999999999999988632111 11111111 3456666676543 2346676665
No 24
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.04 E-value=1e-09 Score=93.98 Aligned_cols=79 Identities=22% Similarity=0.170 Sum_probs=62.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVKQVDVRFIP 80 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~~~d~~f~p 80 (231)
+++|+|||||||||++++++|+++|++|+++.|+.........+... ..+++++.+|++|.+++.++++++|++++.
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~ 84 (322)
T PLN02986 5 GKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFHT 84 (322)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEEe
Confidence 57999999999999999999999999999999976431111111111 146788999999999999999999999885
Q ss_pred cc
Q 043777 81 SE 82 (231)
Q Consensus 81 s~ 82 (231)
+.
T Consensus 85 A~ 86 (322)
T PLN02986 85 AS 86 (322)
T ss_pred CC
Confidence 43
No 25
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.04 E-value=7.9e-09 Score=85.67 Aligned_cols=96 Identities=21% Similarity=0.189 Sum_probs=69.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCC--EEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHcc--CCEEE
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHP--KFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQ--VDVRF 78 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~--v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~--~d~~f 78 (231)
|++|||||+||||+..++.++++..+ |+.++.-.-.. ..+.+..+. ++..++++|++|.+.+.++++. +|++.
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAg-n~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vv 79 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAG-NLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVV 79 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccC-CHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEE
Confidence 57999999999999999999998643 56555432211 122223333 6899999999999999999995 67654
Q ss_pred E--------cccCCCcceeechhHHHHHHHh
Q 043777 79 I--------PSEYGAGVFVKDTDVAAFTINA 101 (231)
Q Consensus 79 ~--------ps~~g~~~~~~~~di~~~~~~~ 101 (231)
+ -|-.++..|+..+-++++++..
T Consensus 80 hfAAESHVDRSI~~P~~Fi~TNv~GT~~LLE 110 (340)
T COG1088 80 HFAAESHVDRSIDGPAPFIQTNVVGTYTLLE 110 (340)
T ss_pred EechhccccccccChhhhhhcchHHHHHHHH
Confidence 3 1233556788889999887643
No 26
>PRK05865 hypothetical protein; Provisional
Probab=99.04 E-value=5.2e-09 Score=99.39 Aligned_cols=70 Identities=21% Similarity=0.203 Sum_probs=59.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEccc
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSE 82 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~ 82 (231)
|+|+|||||||||++++++|+++|++|++++|+... ....++.++.+|++|.+++.++++++|++++.+.
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~--------~~~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa 70 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPD--------SWPSSADFIAADIRDATAVESAMTGADVVAHCAW 70 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchh--------hcccCceEEEeeCCCHHHHHHHHhCCCEEEECCC
Confidence 579999999999999999999999999999986421 1124678899999999999999999999988653
No 27
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.03 E-value=7.1e-09 Score=96.96 Aligned_cols=75 Identities=19% Similarity=0.189 Sum_probs=54.4
Q ss_pred CeEEEEcCCChhHHHHHHHHH--hCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCH------HHHHHHHccCC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSI--EYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDE------KSLLEAVKQVD 75 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~--~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~------~~l~~al~~~d 75 (231)
|+|||||||||||++++++|+ +.|++|++++|+............+. .+++++.+|++|+ +.+.++ +++|
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D 79 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GDID 79 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cCCC
Confidence 579999999999999999999 57899999999643211111111122 5688899999984 455555 8889
Q ss_pred EEEEc
Q 043777 76 VRFIP 80 (231)
Q Consensus 76 ~~f~p 80 (231)
++|+.
T Consensus 80 ~Vih~ 84 (657)
T PRK07201 80 HVVHL 84 (657)
T ss_pred EEEEC
Confidence 87763
No 28
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.02 E-value=7.2e-09 Score=85.80 Aligned_cols=82 Identities=18% Similarity=0.173 Sum_probs=63.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc----CCcEEEEEcCCCHHHHHHHHc-----
Q 043777 2 AGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH----SGVFDYWGLLEDEKSLLEAVK----- 72 (231)
Q Consensus 2 ~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~----~~v~~~~~D~~d~~~l~~al~----- 72 (231)
.++++++|||||++||..+++.|.++|++++++.|+.+. ..++.+++. ..+.++.+|+++++++.+..+
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~k--L~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~ 81 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDK--LEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKER 81 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHH--HHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhc
Confidence 346799999999999999999999999999999998643 111222222 456789999999998877665
Q ss_pred --cCCEEEEcccCCC
Q 043777 73 --QVDVRFIPSEYGA 85 (231)
Q Consensus 73 --~~d~~f~ps~~g~ 85 (231)
.+|+..-.+.||.
T Consensus 82 ~~~IdvLVNNAG~g~ 96 (265)
T COG0300 82 GGPIDVLVNNAGFGT 96 (265)
T ss_pred CCcccEEEECCCcCC
Confidence 3677776777765
No 29
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=99.02 E-value=1.5e-09 Score=93.90 Aligned_cols=74 Identities=19% Similarity=0.278 Sum_probs=59.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHhC-CCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCC-CHHHHHHHHccCCEEEEcc
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEY-GHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLE-DEKSLLEAVKQVDVRFIPS 81 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~-g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~-d~~~l~~al~~~d~~f~ps 81 (231)
|+|+|||||||||++|+++|++. |++|++++|+... . ..... .+++++.+|+. +.+.+.++++++|+++|-+
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~---~--~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~a 76 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDR---L--GDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLV 76 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHH---H--HHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECc
Confidence 58999999999999999999986 6999999986421 1 01112 46889999997 7788889999999999855
Q ss_pred cC
Q 043777 82 EY 83 (231)
Q Consensus 82 ~~ 83 (231)
..
T Consensus 77 a~ 78 (347)
T PRK11908 77 AI 78 (347)
T ss_pred cc
Confidence 44
No 30
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=99.01 E-value=9.9e-09 Score=86.99 Aligned_cols=75 Identities=17% Similarity=0.118 Sum_probs=56.1
Q ss_pred eEEEEcCCChhHHHHHHHHHhCC--CCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHcc--CCEEEE
Q 043777 6 NVLVIGAIGRIGYHFTRRSIEYG--HPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQ--VDVRFI 79 (231)
Q Consensus 6 ~ilVtGatG~iG~~i~~~L~~~g--~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~--~d~~f~ 79 (231)
+|+||||||+||++++++|+++| ++|+++.|...... .+.+..+. .++.++.+|++|++++.+++++ +|++++
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~ 79 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGN-LENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVH 79 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchh-hhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEE
Confidence 58999999999999999999987 67888776431110 11111221 4678899999999999999988 899877
Q ss_pred cc
Q 043777 80 PS 81 (231)
Q Consensus 80 ps 81 (231)
.+
T Consensus 80 ~a 81 (317)
T TIGR01181 80 FA 81 (317)
T ss_pred cc
Confidence 44
No 31
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=99.01 E-value=1.6e-09 Score=93.64 Aligned_cols=78 Identities=19% Similarity=0.144 Sum_probs=59.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCc--h-hhhhhhhh----cCCcEEEEEcCCCHHHHHHHHcc--CC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASN--F-NFSLLRVF----HSGVFDYWGLLEDEKSLLEAVKQ--VD 75 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~--~-~~~~~~~~----~~~v~~~~~D~~d~~~l~~al~~--~d 75 (231)
|+|||||||||||++++++|++.|++|++++|..... . ........ ..++.++.+|++|.+.+.+++++ +|
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d 80 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT 80 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence 5899999999999999999999999999999875320 0 01000000 13578899999999999999986 59
Q ss_pred EEEEccc
Q 043777 76 VRFIPSE 82 (231)
Q Consensus 76 ~~f~ps~ 82 (231)
+++|.+.
T Consensus 81 ~ViH~Aa 87 (343)
T TIGR01472 81 EIYNLAA 87 (343)
T ss_pred EEEECCc
Confidence 9888554
No 32
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=98.99 E-value=4.9e-09 Score=81.17 Aligned_cols=68 Identities=22% Similarity=0.281 Sum_probs=59.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFI 79 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ 79 (231)
|||.|+||||.+|++|+++.+++||+|++++|+.++- ..+ +++.+++.|+.|++++.+.+.+.|+++.
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~------~~~-~~~~i~q~Difd~~~~a~~l~g~DaVIs 68 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKL------AAR-QGVTILQKDIFDLTSLASDLAGHDAVIS 68 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhc------ccc-ccceeecccccChhhhHhhhcCCceEEE
Confidence 6899999999999999999999999999999986431 111 6788999999999999999999998664
No 33
>PLN02686 cinnamoyl-CoA reductase
Probab=98.99 E-value=1.6e-09 Score=94.71 Aligned_cols=76 Identities=21% Similarity=0.243 Sum_probs=60.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---------cCCcEEEEEcCCCHHHHHHHHccC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---------HSGVFDYWGLLEDEKSLLEAVKQV 74 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---------~~~v~~~~~D~~d~~~l~~al~~~ 74 (231)
+|+|+||||+||||++++++|+++|++|+++.|+... .+.+..+ ..++.++.+|++|.+++.++++++
T Consensus 53 ~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~---~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~~ 129 (367)
T PLN02686 53 ARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQED---KEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDGC 129 (367)
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHhc
Confidence 6789999999999999999999999999998886431 1111111 124778899999999999999999
Q ss_pred CEEEEccc
Q 043777 75 DVRFIPSE 82 (231)
Q Consensus 75 d~~f~ps~ 82 (231)
|.+|+.+.
T Consensus 130 d~V~hlA~ 137 (367)
T PLN02686 130 AGVFHTSA 137 (367)
T ss_pred cEEEecCe
Confidence 99887543
No 34
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=98.98 E-value=2.2e-09 Score=93.18 Aligned_cols=77 Identities=29% Similarity=0.337 Sum_probs=61.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQVDVRFIPS 81 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~~d~~f~ps 81 (231)
.|+||||||+||||++++++|+++|++|+++.|+.... ......+. .++.++.+|++|.+.+.++++++|++++.+
T Consensus 10 ~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A 87 (353)
T PLN02896 10 TGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKS--LHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVA 87 (353)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHH--HHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECC
Confidence 68999999999999999999999999999998875321 11112221 457889999999999999999999988854
Q ss_pred c
Q 043777 82 E 82 (231)
Q Consensus 82 ~ 82 (231)
.
T Consensus 88 ~ 88 (353)
T PLN02896 88 A 88 (353)
T ss_pred c
Confidence 3
No 35
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=98.97 E-value=3.1e-09 Score=91.05 Aligned_cols=82 Identities=23% Similarity=0.162 Sum_probs=62.7
Q ss_pred CCC-CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh-c--CCcEEEEEcCCCHHHHHHHHccCCE
Q 043777 1 MAG-KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF-H--SGVFDYWGLLEDEKSLLEAVKQVDV 76 (231)
Q Consensus 1 M~~-~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~-~--~~v~~~~~D~~d~~~l~~al~~~d~ 76 (231)
|.. +|+++||||+||||++++++|+++|++|+++.|+.........+... . .++.++.+|++|.+++.++++++|+
T Consensus 1 ~~~~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 80 (325)
T PLN02989 1 MADGGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCET 80 (325)
T ss_pred CCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCE
Confidence 443 58999999999999999999999999999888875421111001011 1 3578889999999999999999999
Q ss_pred EEEccc
Q 043777 77 RFIPSE 82 (231)
Q Consensus 77 ~f~ps~ 82 (231)
+++.+.
T Consensus 81 vih~A~ 86 (325)
T PLN02989 81 VFHTAS 86 (325)
T ss_pred EEEeCC
Confidence 888554
No 36
>PRK06179 short chain dehydrogenase; Provisional
Probab=98.96 E-value=3e-09 Score=88.60 Aligned_cols=76 Identities=25% Similarity=0.197 Sum_probs=62.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------
Q 043777 1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ------- 73 (231)
Q Consensus 1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~------- 73 (231)
|+++++++||||+|+||++++++|+++|++|++++|+... . .. ..++.++.+|++|++++.+++++
T Consensus 1 m~~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~---~---~~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~ 73 (270)
T PRK06179 1 MSNSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPAR---A---AP-IPGVELLELDVTDDASVQAAVDEVIARAGR 73 (270)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhh---c---cc-cCCCeeEEeecCCHHHHHHHHHHHHHhCCC
Confidence 7777899999999999999999999999999999997531 0 01 15678899999999999988875
Q ss_pred CCEEEEcccC
Q 043777 74 VDVRFIPSEY 83 (231)
Q Consensus 74 ~d~~f~ps~~ 83 (231)
+|++++.+..
T Consensus 74 ~d~li~~ag~ 83 (270)
T PRK06179 74 IDVLVNNAGV 83 (270)
T ss_pred CCEEEECCCC
Confidence 5888876544
No 37
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=98.95 E-value=4.2e-09 Score=91.27 Aligned_cols=77 Identities=21% Similarity=0.321 Sum_probs=60.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh--cCCcEEEEEcCCCHHHHHHHHcc--CCEEEE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF--HSGVFDYWGLLEDEKSLLEAVKQ--VDVRFI 79 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~--~~~v~~~~~D~~d~~~l~~al~~--~d~~f~ 79 (231)
+|+|+||||+||||+++++.|+++|++|++++|+..... ...... ...+.++.+|++|.+++.+++++ +|++++
T Consensus 4 ~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih 81 (349)
T TIGR02622 4 GKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSP--NLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFH 81 (349)
T ss_pred CCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccch--hHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEE
Confidence 589999999999999999999999999999998764311 111111 13567889999999999999986 588887
Q ss_pred ccc
Q 043777 80 PSE 82 (231)
Q Consensus 80 ps~ 82 (231)
...
T Consensus 82 ~A~ 84 (349)
T TIGR02622 82 LAA 84 (349)
T ss_pred CCc
Confidence 654
No 38
>PLN02572 UDP-sulfoquinovose synthase
Probab=98.94 E-value=4.3e-09 Score=94.13 Aligned_cols=78 Identities=23% Similarity=0.157 Sum_probs=59.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchh--------------hhhhhh---hc-CCcEEEEEcCCCHH
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFN--------------FSLLRV---FH-SGVFDYWGLLEDEK 65 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~--------------~~~~~~---~~-~~v~~~~~D~~d~~ 65 (231)
+|+|+||||+||||++|+++|+++|++|++++|.....+. ...++. .. .+++++.+|++|.+
T Consensus 47 ~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d~~ 126 (442)
T PLN02572 47 KKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICDFE 126 (442)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCCHH
Confidence 5789999999999999999999999999998753211000 000111 11 36889999999999
Q ss_pred HHHHHHcc--CCEEEEcc
Q 043777 66 SLLEAVKQ--VDVRFIPS 81 (231)
Q Consensus 66 ~l~~al~~--~d~~f~ps 81 (231)
.+.+++++ +|++||.+
T Consensus 127 ~v~~~l~~~~~D~ViHlA 144 (442)
T PLN02572 127 FLSEAFKSFEPDAVVHFG 144 (442)
T ss_pred HHHHHHHhCCCCEEEECC
Confidence 99999985 79999865
No 39
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=98.94 E-value=2.5e-08 Score=83.74 Aligned_cols=71 Identities=25% Similarity=0.273 Sum_probs=54.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhh-c--CCcEEEEEcCCCHHHHHHHHccC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVF-H--SGVFDYWGLLEDEKSLLEAVKQV 74 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~-~--~~v~~~~~D~~d~~~l~~al~~~ 74 (231)
.++||||||+||||+|.+-+|++.|+.|.+++.-..... .-+..+.+ . ..+.++++|++|.+.|++.++..
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~ 76 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV 76 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc
Confidence 378999999999999999999999999999876432211 11111111 2 67899999999999999999863
No 40
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.94 E-value=2.6e-08 Score=93.52 Aligned_cols=77 Identities=17% Similarity=0.050 Sum_probs=56.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhC--CCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHH--ccCCEEE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEY--GHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAV--KQVDVRF 78 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~--g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al--~~~d~~f 78 (231)
.|+|||||||||||++++++|+++ +++|++++|............... .+++++.+|++|.+.+..++ .++|+++
T Consensus 6 ~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~Vi 85 (668)
T PLN02260 6 PKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTIM 85 (668)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEEE
Confidence 589999999999999999999998 578888887431111011111111 57889999999999888776 5689877
Q ss_pred Ec
Q 043777 79 IP 80 (231)
Q Consensus 79 ~p 80 (231)
+-
T Consensus 86 Hl 87 (668)
T PLN02260 86 HF 87 (668)
T ss_pred EC
Confidence 63
No 41
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=98.93 E-value=6.2e-09 Score=85.80 Aligned_cols=82 Identities=16% Similarity=0.088 Sum_probs=61.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------
Q 043777 1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK------- 72 (231)
Q Consensus 1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~------- 72 (231)
|..+++++||||+|+||++++++|+++|++|.+++|+..... ..+.+......+.++.+|++|.+++.++++
T Consensus 1 ~~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 80 (258)
T PRK12429 1 MLKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFG 80 (258)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 455689999999999999999999999999999999754211 111111112457789999999999888776
Q ss_pred cCCEEEEccc
Q 043777 73 QVDVRFIPSE 82 (231)
Q Consensus 73 ~~d~~f~ps~ 82 (231)
.+|++++.+.
T Consensus 81 ~~d~vi~~a~ 90 (258)
T PRK12429 81 GVDILVNNAG 90 (258)
T ss_pred CCCEEEECCC
Confidence 3688877543
No 42
>PRK05993 short chain dehydrogenase; Provisional
Probab=98.91 E-value=6.3e-09 Score=87.26 Aligned_cols=78 Identities=24% Similarity=0.320 Sum_probs=61.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHcc------
Q 043777 1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQ------ 73 (231)
Q Consensus 1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~------ 73 (231)
|.++++++||||+|+||++++++|.++|++|++++|+... +..+. .++.++.+|++|.+++.++++.
T Consensus 1 m~~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~------~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 74 (277)
T PRK05993 1 MDMKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEED------VAALEAEGLEAFQLDYAEPESIAALVAQVLELSG 74 (277)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH------HHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence 6667899999999999999999999999999999997521 12222 5678899999999988776653
Q ss_pred --CCEEEEcccCC
Q 043777 74 --VDVRFIPSEYG 84 (231)
Q Consensus 74 --~d~~f~ps~~g 84 (231)
+|++++.+.++
T Consensus 75 g~id~li~~Ag~~ 87 (277)
T PRK05993 75 GRLDALFNNGAYG 87 (277)
T ss_pred CCccEEEECCCcC
Confidence 57877765443
No 43
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=98.91 E-value=4.6e-09 Score=98.48 Aligned_cols=74 Identities=22% Similarity=0.223 Sum_probs=58.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhC-CCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHH-HHHHHccCCEEEEc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEY-GHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKS-LLEAVKQVDVRFIP 80 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~-g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~-l~~al~~~d~~f~p 80 (231)
+|+|+|||||||||++++++|++. |++|++++|..... . .... .+++++.+|++|... +.++++++|++||-
T Consensus 315 ~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~--~---~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHl 389 (660)
T PRK08125 315 RTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAI--S---RFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPL 389 (660)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhh--h---hhcCCCceEEEeccccCcHHHHHHHhcCCCEEEEC
Confidence 579999999999999999999985 79999999975321 1 1112 468889999998665 67888999999985
Q ss_pred cc
Q 043777 81 SE 82 (231)
Q Consensus 81 s~ 82 (231)
+.
T Consensus 390 Aa 391 (660)
T PRK08125 390 VA 391 (660)
T ss_pred cc
Confidence 43
No 44
>PRK06180 short chain dehydrogenase; Provisional
Probab=98.89 E-value=1e-08 Score=85.88 Aligned_cols=81 Identities=16% Similarity=0.221 Sum_probs=61.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------
Q 043777 1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ------- 73 (231)
Q Consensus 1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~------- 73 (231)
|+++++++||||+|+||++++++|+++|++|++++|+... ..........++..+.+|++|.+++.+++++
T Consensus 1 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~--~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~ 78 (277)
T PRK06180 1 MSSMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAA--RADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGP 78 (277)
T ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHH--HHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5556889999999999999999999999999999997531 1111111114577889999999998887763
Q ss_pred CCEEEEcccC
Q 043777 74 VDVRFIPSEY 83 (231)
Q Consensus 74 ~d~~f~ps~~ 83 (231)
+|++++....
T Consensus 79 ~d~vv~~ag~ 88 (277)
T PRK06180 79 IDVLVNNAGY 88 (277)
T ss_pred CCEEEECCCc
Confidence 6888875543
No 45
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=98.89 E-value=7.7e-09 Score=84.82 Aligned_cols=80 Identities=18% Similarity=0.078 Sum_probs=60.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777 2 AGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------Q 73 (231)
Q Consensus 2 ~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~ 73 (231)
.++++|+||||+|++|+++++.|+++|+.|++++|+..... ..+.+......+.++.+|+.|.+++.++++ .
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR 83 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 34678999999999999999999999999999999753211 111111111347788999999999988876 4
Q ss_pred CCEEEEcc
Q 043777 74 VDVRFIPS 81 (231)
Q Consensus 74 ~d~~f~ps 81 (231)
+|.+++..
T Consensus 84 ~d~vi~~a 91 (251)
T PRK12826 84 LDILVANA 91 (251)
T ss_pred CCEEEECC
Confidence 78887754
No 46
>PRK06182 short chain dehydrogenase; Validated
Probab=98.88 E-value=1.4e-08 Score=84.90 Aligned_cols=76 Identities=29% Similarity=0.308 Sum_probs=61.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHc-------
Q 043777 1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVK------- 72 (231)
Q Consensus 1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~------- 72 (231)
|. +++++||||+|+||++++++|+++|++|++++|+... ++.+. .++.++.+|++|.+++.++++
T Consensus 1 ~~-~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~------l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 73 (273)
T PRK06182 1 MQ-KKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDK------MEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEG 73 (273)
T ss_pred CC-CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH------HHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 44 6799999999999999999999999999999997521 12222 568889999999999988876
Q ss_pred cCCEEEEcccC
Q 043777 73 QVDVRFIPSEY 83 (231)
Q Consensus 73 ~~d~~f~ps~~ 83 (231)
++|++++.+..
T Consensus 74 ~id~li~~ag~ 84 (273)
T PRK06182 74 RIDVLVNNAGY 84 (273)
T ss_pred CCCEEEECCCc
Confidence 57888876544
No 47
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=98.88 E-value=8e-09 Score=83.92 Aligned_cols=73 Identities=27% Similarity=0.344 Sum_probs=59.6
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccC--CEEEEcccC
Q 043777 7 VLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQV--DVRFIPSEY 83 (231)
Q Consensus 7 ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~--d~~f~ps~~ 83 (231)
|+|||||||||++++++|+++|+.|+.+.|...... ......++.++.+|+.|.+.+.+++++. |++|+-+..
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~----~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~ 75 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSES----FEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAF 75 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGH----HHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccc----cccccceEEEEEeeccccccccccccccCceEEEEeecc
Confidence 799999999999999999999999999998764211 1111137889999999999999999986 998886554
No 48
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=98.87 E-value=9.2e-09 Score=93.47 Aligned_cols=77 Identities=19% Similarity=0.146 Sum_probs=61.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh------------cCCcEEEEEcCCCHHHHHHH
Q 043777 3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF------------HSGVFDYWGLLEDEKSLLEA 70 (231)
Q Consensus 3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~------------~~~v~~~~~D~~d~~~l~~a 70 (231)
++++|+||||+|+||++++++|+++|++|++++|+.... ......+ ..++.++.+|++|.+++.++
T Consensus 79 ~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl--~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a 156 (576)
T PLN03209 79 DEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRA--ESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA 156 (576)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHH--HHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence 367899999999999999999999999999999975321 1111111 02477899999999999999
Q ss_pred HccCCEEEEcc
Q 043777 71 VKQVDVRFIPS 81 (231)
Q Consensus 71 l~~~d~~f~ps 81 (231)
+.++|++++..
T Consensus 157 LggiDiVVn~A 167 (576)
T PLN03209 157 LGNASVVICCI 167 (576)
T ss_pred hcCCCEEEEcc
Confidence 99999988754
No 49
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=98.87 E-value=1.3e-08 Score=87.44 Aligned_cols=77 Identities=22% Similarity=0.195 Sum_probs=57.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhc-CCcEEEEEcCCCHHHHHHHHc--cCCEEEEc
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFH-SGVFDYWGLLEDEKSLLEAVK--QVDVRFIP 80 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~--~~d~~f~p 80 (231)
|+|+||||||+||++++++|+++|++|+++.|...... ....+.... .++.++.+|++|.+.+.++++ ++|++++.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~ 80 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF 80 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence 57999999999999999999999999999877532111 001111222 346778999999999999987 48988875
Q ss_pred c
Q 043777 81 S 81 (231)
Q Consensus 81 s 81 (231)
+
T Consensus 81 a 81 (338)
T PRK10675 81 A 81 (338)
T ss_pred C
Confidence 4
No 50
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=98.87 E-value=9.6e-09 Score=88.61 Aligned_cols=80 Identities=20% Similarity=0.194 Sum_probs=60.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC-ch-hhhhhh-h---hcCCcEEEEEcCCCHHHHHHHHcc--CC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS-NF-NFSLLR-V---FHSGVFDYWGLLEDEKSLLEAVKQ--VD 75 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~-~~-~~~~~~-~---~~~~v~~~~~D~~d~~~l~~al~~--~d 75 (231)
+|+||||||+||||++++++|+++|++|+++.|.... .. ..+.+. . ...++.++.+|++|.+++.+++++ +|
T Consensus 6 ~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 85 (340)
T PLN02653 6 RKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIKPD 85 (340)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcCCC
Confidence 5789999999999999999999999999999987532 10 111110 0 013578899999999999999985 59
Q ss_pred EEEEcccC
Q 043777 76 VRFIPSEY 83 (231)
Q Consensus 76 ~~f~ps~~ 83 (231)
++++.+..
T Consensus 86 ~Vih~A~~ 93 (340)
T PLN02653 86 EVYNLAAQ 93 (340)
T ss_pred EEEECCcc
Confidence 88886543
No 51
>PRK09135 pteridine reductase; Provisional
Probab=98.86 E-value=1.2e-08 Score=83.66 Aligned_cols=79 Identities=20% Similarity=0.129 Sum_probs=59.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhc-CCcEEEEEcCCCHHHHHHHHcc-------
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQ------- 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~------- 73 (231)
.++++||||+|+||++++++|+++|++|++++|+..... ..+.+.... ..+.++.+|++|.+++.++++.
T Consensus 6 ~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 85 (249)
T PRK09135 6 AKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFGR 85 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999999999999999999998642211 011111111 3577889999999999888774
Q ss_pred CCEEEEccc
Q 043777 74 VDVRFIPSE 82 (231)
Q Consensus 74 ~d~~f~ps~ 82 (231)
+|++|+.+.
T Consensus 86 ~d~vi~~ag 94 (249)
T PRK09135 86 LDALVNNAS 94 (249)
T ss_pred CCEEEECCC
Confidence 688887554
No 52
>PRK09186 flagellin modification protein A; Provisional
Probab=98.86 E-value=1.1e-08 Score=84.33 Aligned_cols=79 Identities=23% Similarity=0.167 Sum_probs=59.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh----c-CCcEEEEEcCCCHHHHHHHHcc--
Q 043777 1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF----H-SGVFDYWGLLEDEKSLLEAVKQ-- 73 (231)
Q Consensus 1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~----~-~~v~~~~~D~~d~~~l~~al~~-- 73 (231)
|.++++++||||+|+||+++++.|+++|++|+++.|+.... .+....+ . ..+.++.+|++|++++.+++++
T Consensus 1 ~~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~--~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 78 (256)
T PRK09186 1 MLKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEAL--NELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSA 78 (256)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHH--HHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHH
Confidence 56678999999999999999999999999999998875321 1111111 2 3456679999999999888775
Q ss_pred -----CCEEEEcc
Q 043777 74 -----VDVRFIPS 81 (231)
Q Consensus 74 -----~d~~f~ps 81 (231)
+|++++..
T Consensus 79 ~~~~~id~vi~~A 91 (256)
T PRK09186 79 EKYGKIDGAVNCA 91 (256)
T ss_pred HHcCCccEEEECC
Confidence 68777643
No 53
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=98.86 E-value=1.2e-08 Score=88.43 Aligned_cols=78 Identities=15% Similarity=0.089 Sum_probs=56.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh-c-CCcEEEEEcCCCHHHHHHHHcc--CCEEEEc
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF-H-SGVFDYWGLLEDEKSLLEAVKQ--VDVRFIP 80 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~-~-~~v~~~~~D~~d~~~l~~al~~--~d~~f~p 80 (231)
++|+|||||||||++++++|+++|++++++.++.........+... . ..+.++.+|++|.+++.+++++ +|.+++.
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih~ 81 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMHL 81 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEEC
Confidence 5899999999999999999999998866554432111100001111 1 3567889999999999999985 8998886
Q ss_pred cc
Q 043777 81 SE 82 (231)
Q Consensus 81 s~ 82 (231)
+.
T Consensus 82 A~ 83 (355)
T PRK10217 82 AA 83 (355)
T ss_pred Cc
Confidence 54
No 54
>PRK07806 short chain dehydrogenase; Provisional
Probab=98.86 E-value=1.9e-08 Score=82.61 Aligned_cols=78 Identities=17% Similarity=0.109 Sum_probs=57.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QV 74 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~ 74 (231)
.++++||||+|+||++++++|+++|++|+++.|+..... ..+.++.....+.++.+|++|++++.++++ ++
T Consensus 6 ~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 85 (248)
T PRK07806 6 GKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGGL 85 (248)
T ss_pred CcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 478999999999999999999999999999998653211 011111112356788999999999887776 37
Q ss_pred CEEEEcc
Q 043777 75 DVRFIPS 81 (231)
Q Consensus 75 d~~f~ps 81 (231)
|++++..
T Consensus 86 d~vi~~a 92 (248)
T PRK07806 86 DALVLNA 92 (248)
T ss_pred cEEEECC
Confidence 8777654
No 55
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=98.86 E-value=2.5e-08 Score=85.91 Aligned_cols=123 Identities=19% Similarity=0.121 Sum_probs=79.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCC--CCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEE
Q 043777 1 MAGKSNVLVIGAIGRIGYHFTRRSIEYG--HPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVR 77 (231)
Q Consensus 1 M~~~~~ilVtGatG~iG~~i~~~L~~~g--~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~ 77 (231)
|+++.+++||||+||+|++++++|++++ .++++++....... ..+........++.+.+|++|...+.++++++ .+
T Consensus 1 ~~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~V 79 (361)
T KOG1430|consen 1 MEKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VV 79 (361)
T ss_pred CCcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eE
Confidence 6667899999999999999999999998 77888887654222 11111111367889999999999999999999 54
Q ss_pred EEcccCCCcceee--------chhHHHHHHHhhcCccccCceEEEeeeeeeeeec
Q 043777 78 FIPSEYGAGVFVK--------DTDVAAFTINALDDPRTLNKLLHLREISHTFNME 124 (231)
Q Consensus 78 f~ps~~g~~~~~~--------~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (231)
++....+...+.. .+-.++..+.........++.+|+++....|..+
T Consensus 80 vh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~ 134 (361)
T KOG1430|consen 80 VHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGE 134 (361)
T ss_pred EEeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCe
Confidence 4433333222221 1222222222222233567788888666665443
No 56
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=98.85 E-value=1.5e-08 Score=83.72 Aligned_cols=76 Identities=21% Similarity=0.254 Sum_probs=59.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCC-HHHHHHHH-ccCCEEEEcc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLED-EKSLLEAV-KQVDVRFIPS 81 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d-~~~l~~al-~~~d~~f~ps 81 (231)
+|+|+||||||++|+.++++|+++|++|+++.|+.+.. .+.... ..++.++.+|++| .+.+.+.+ .++|++|+..
T Consensus 17 ~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~--~~~~~~-~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~ 93 (251)
T PLN00141 17 TKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKA--KTSLPQ-DPSLQIVRADVTEGSDKLVEAIGDDSDAVICAT 93 (251)
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHH--HHhccc-CCceEEEEeeCCCCHHHHHHHhhcCCCEEEECC
Confidence 57899999999999999999999999999999975310 111111 1468899999998 57788888 6899988754
Q ss_pred c
Q 043777 82 E 82 (231)
Q Consensus 82 ~ 82 (231)
.
T Consensus 94 g 94 (251)
T PLN00141 94 G 94 (251)
T ss_pred C
Confidence 3
No 57
>PLN02240 UDP-glucose 4-epimerase
Probab=98.85 E-value=1.7e-08 Score=87.34 Aligned_cols=80 Identities=16% Similarity=0.100 Sum_probs=59.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhh----hcCCcEEEEEcCCCHHHHHHHHc--cCC
Q 043777 3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRV----FHSGVFDYWGLLEDEKSLLEAVK--QVD 75 (231)
Q Consensus 3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~----~~~~v~~~~~D~~d~~~l~~al~--~~d 75 (231)
++++|+||||||++|++++++|+++|++|++++|...... ....... ...++.++.+|++|.+.+.++++ ++|
T Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~d 83 (352)
T PLN02240 4 MGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRFD 83 (352)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCCC
Confidence 3579999999999999999999999999999987542211 0011111 11357889999999999999887 578
Q ss_pred EEEEccc
Q 043777 76 VRFIPSE 82 (231)
Q Consensus 76 ~~f~ps~ 82 (231)
.+++...
T Consensus 84 ~vih~a~ 90 (352)
T PLN02240 84 AVIHFAG 90 (352)
T ss_pred EEEEccc
Confidence 8887543
No 58
>PRK06482 short chain dehydrogenase; Provisional
Probab=98.85 E-value=1.2e-08 Score=85.30 Aligned_cols=77 Identities=18% Similarity=0.207 Sum_probs=59.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CCEE
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VDVR 77 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d~~ 77 (231)
++++||||+|+||++++++|+++|+.|.++.|+... ..........++.++.+|++|.+++.+++++ +|++
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDA--LDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVV 80 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 689999999999999999999999999999987421 1111112224678899999999998877653 7988
Q ss_pred EEcccC
Q 043777 78 FIPSEY 83 (231)
Q Consensus 78 f~ps~~ 83 (231)
++.+..
T Consensus 81 i~~ag~ 86 (276)
T PRK06482 81 VSNAGY 86 (276)
T ss_pred EECCCC
Confidence 886543
No 59
>PRK09291 short chain dehydrogenase; Provisional
Probab=98.85 E-value=1.5e-08 Score=83.62 Aligned_cols=80 Identities=18% Similarity=0.029 Sum_probs=61.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-cCCEEEEcc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-QVDVRFIPS 81 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-~~d~~f~ps 81 (231)
+++++||||||+||+++++.|+++|++|++++|+..... ..+.......++.++.+|++|.+++.+++. ++|++++.+
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a 81 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA 81 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence 368999999999999999999999999999999742100 001111112457888999999999999887 699998865
Q ss_pred cC
Q 043777 82 EY 83 (231)
Q Consensus 82 ~~ 83 (231)
.+
T Consensus 82 g~ 83 (257)
T PRK09291 82 GI 83 (257)
T ss_pred Cc
Confidence 44
No 60
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=98.85 E-value=1.2e-08 Score=83.28 Aligned_cols=79 Identities=16% Similarity=0.060 Sum_probs=58.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VD 75 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d 75 (231)
+++|+||||+|++|+++++.|+++|++|.++.|+..... ....+......+.++.+|++|++++.+++++ +|
T Consensus 5 ~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 84 (246)
T PRK05653 5 GKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGALD 84 (246)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 478999999999999999999999999999999753211 0111111124567888999999998887765 48
Q ss_pred EEEEccc
Q 043777 76 VRFIPSE 82 (231)
Q Consensus 76 ~~f~ps~ 82 (231)
.+++...
T Consensus 85 ~vi~~ag 91 (246)
T PRK05653 85 ILVNNAG 91 (246)
T ss_pred EEEECCC
Confidence 7777543
No 61
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=98.84 E-value=2.1e-08 Score=82.46 Aligned_cols=34 Identities=32% Similarity=0.453 Sum_probs=31.9
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC
Q 043777 7 VLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS 40 (231)
Q Consensus 7 ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~ 40 (231)
|+||||||+||++|+..|.+.||+|++++|+...
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~ 34 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPK 34 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcc
Confidence 6899999999999999999999999999998754
No 62
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=98.84 E-value=1.2e-07 Score=81.79 Aligned_cols=74 Identities=20% Similarity=0.231 Sum_probs=52.8
Q ss_pred eEEEEcCCChhHHHHHHHHHhCC--CCEEEEEcCCCCch-hhhh---hhhh-------c-CCcEEEEEcCCCH------H
Q 043777 6 NVLVIGAIGRIGYHFTRRSIEYG--HPKFALIRDSASNF-NFSL---LRVF-------H-SGVFDYWGLLEDE------K 65 (231)
Q Consensus 6 ~ilVtGatG~iG~~i~~~L~~~g--~~v~~~~R~~~~~~-~~~~---~~~~-------~-~~v~~~~~D~~d~------~ 65 (231)
+|+|||||||+|++++++|+++| +.|+++.|+.+... .... ++.. . .++.++.+|++++ +
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 58999999999999999999998 56999999764211 0011 1111 1 3678899998753 4
Q ss_pred HHHHHHccCCEEEE
Q 043777 66 SLLEAVKQVDVRFI 79 (231)
Q Consensus 66 ~l~~al~~~d~~f~ 79 (231)
.+..+.+++|++++
T Consensus 81 ~~~~~~~~~d~vih 94 (367)
T TIGR01746 81 EWERLAENVDTIVH 94 (367)
T ss_pred HHHHHHhhCCEEEe
Confidence 56677777888765
No 63
>PRK06194 hypothetical protein; Provisional
Probab=98.84 E-value=1.7e-08 Score=84.86 Aligned_cols=78 Identities=13% Similarity=0.101 Sum_probs=59.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc-------
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ------- 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~------- 73 (231)
++++|||||+|+||++++++|+++|+.|++++|+... ..+....+. ..+.++.+|++|.+++.+++++
T Consensus 6 ~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~ 83 (287)
T PRK06194 6 GKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDA--LDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGA 83 (287)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHH--HHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999999999999999986432 111112221 3466789999999999888774
Q ss_pred CCEEEEcccC
Q 043777 74 VDVRFIPSEY 83 (231)
Q Consensus 74 ~d~~f~ps~~ 83 (231)
+|++++....
T Consensus 84 id~vi~~Ag~ 93 (287)
T PRK06194 84 VHLLFNNAGV 93 (287)
T ss_pred CCEEEECCCC
Confidence 6988886544
No 64
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=98.83 E-value=7.9e-09 Score=87.32 Aligned_cols=34 Identities=29% Similarity=0.377 Sum_probs=31.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
|||||+||+|++|++|++.|.+.|++|..+.|..
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~~ 34 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRSD 34 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTTC
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCchh
Confidence 7899999999999999999999999999987764
No 65
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=98.82 E-value=2e-08 Score=83.03 Aligned_cols=79 Identities=11% Similarity=0.038 Sum_probs=58.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VD 75 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d 75 (231)
+++++||||+|+||++++++|+++|++|+++.|+..... ..+.+......+.++++|++|.+++.+++++ +|
T Consensus 7 ~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d 86 (262)
T PRK13394 7 GKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSVD 86 (262)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 578999999999999999999999999999999763211 1111111123466789999999998887764 78
Q ss_pred EEEEccc
Q 043777 76 VRFIPSE 82 (231)
Q Consensus 76 ~~f~ps~ 82 (231)
++++...
T Consensus 87 ~vi~~ag 93 (262)
T PRK13394 87 ILVSNAG 93 (262)
T ss_pred EEEECCc
Confidence 8777543
No 66
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=98.82 E-value=5.4e-08 Score=80.27 Aligned_cols=60 Identities=18% Similarity=0.163 Sum_probs=42.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCH
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDE 64 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~ 64 (231)
+++|+||||+||||+||++.|..+||.|++++...... +......+. ...+.+.-|+..+
T Consensus 27 ~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~-k~n~~~~~~~~~fel~~hdv~~p 87 (350)
T KOG1429|consen 27 NLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGR-KENLEHWIGHPNFELIRHDVVEP 87 (350)
T ss_pred CcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccc-hhhcchhccCcceeEEEeechhH
Confidence 57999999999999999999999999999988654321 111111122 5566666676554
No 67
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=98.81 E-value=3e-08 Score=80.99 Aligned_cols=79 Identities=22% Similarity=0.166 Sum_probs=58.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------
Q 043777 3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK------- 72 (231)
Q Consensus 3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~------- 72 (231)
++++++||||||++|+++++.|+++|++|+++.|+..... ......+ ...+.++.+|++|.+++.++++
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGA-EALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFG 82 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHH-HHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3579999999999999999999999999988888653211 1111122 2456778899999999887766
Q ss_pred cCCEEEEccc
Q 043777 73 QVDVRFIPSE 82 (231)
Q Consensus 73 ~~d~~f~ps~ 82 (231)
++|.+++...
T Consensus 83 ~id~vi~~ag 92 (248)
T PRK05557 83 GVDILVNNAG 92 (248)
T ss_pred CCCEEEECCC
Confidence 4688777543
No 68
>PRK08219 short chain dehydrogenase; Provisional
Probab=98.80 E-value=2.3e-08 Score=80.84 Aligned_cols=74 Identities=23% Similarity=0.214 Sum_probs=58.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc---CCEEEEc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ---VDVRFIP 80 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~---~d~~f~p 80 (231)
+|+++||||+|++|+++++.|+++ ++|+++.|+... .+.+.....++.++.+|++|.+++.++++. +|.+++.
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~---~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 78 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAER---LDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHN 78 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHH---HHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEEC
Confidence 578999999999999999999999 999999997421 111111114678899999999999998874 7888775
Q ss_pred c
Q 043777 81 S 81 (231)
Q Consensus 81 s 81 (231)
.
T Consensus 79 a 79 (227)
T PRK08219 79 A 79 (227)
T ss_pred C
Confidence 4
No 69
>PRK12320 hypothetical protein; Provisional
Probab=98.79 E-value=1.9e-08 Score=93.79 Aligned_cols=69 Identities=22% Similarity=0.244 Sum_probs=57.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEccc
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSE 82 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~ 82 (231)
|+|+||||+||||++++++|+++|++|++++|.... ....+++++.+|++|.. +.++++++|++|+-..
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~--------~~~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa 69 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHD--------ALDPRVDYVCASLRNPV-LQELAGEADAVIHLAP 69 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhh--------cccCCceEEEccCCCHH-HHHHhcCCCEEEEcCc
Confidence 589999999999999999999999999999986421 01146789999999985 7888899999988654
No 70
>PRK07454 short chain dehydrogenase; Provisional
Probab=98.79 E-value=2.5e-08 Score=81.62 Aligned_cols=78 Identities=15% Similarity=0.091 Sum_probs=59.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHcc------
Q 043777 3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVKQ------ 73 (231)
Q Consensus 3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~~------ 73 (231)
++++++||||+|++|+.++++|+++|+.|++++|+.... .+..... ..++.++.+|++|.+++.++++.
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDAL--EALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFG 82 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 357899999999999999999999999999999975321 1111111 24577889999999988877763
Q ss_pred -CCEEEEccc
Q 043777 74 -VDVRFIPSE 82 (231)
Q Consensus 74 -~d~~f~ps~ 82 (231)
+|++++...
T Consensus 83 ~id~lv~~ag 92 (241)
T PRK07454 83 CPDVLINNAG 92 (241)
T ss_pred CCCEEEECCC
Confidence 788877543
No 71
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.79 E-value=2e-08 Score=81.96 Aligned_cols=79 Identities=16% Similarity=0.120 Sum_probs=58.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------C
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------V 74 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~ 74 (231)
+++|+||||||++|+++++.|+++|++|+++.|...... ..+.......++.++.+|+.|.+++.+++++ +
T Consensus 6 ~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i 85 (249)
T PRK12825 6 GRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGRI 85 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999999988777653211 0111111224578899999999998887753 5
Q ss_pred CEEEEccc
Q 043777 75 DVRFIPSE 82 (231)
Q Consensus 75 d~~f~ps~ 82 (231)
|++++...
T Consensus 86 d~vi~~ag 93 (249)
T PRK12825 86 DILVNNAG 93 (249)
T ss_pred CEEEECCc
Confidence 88777543
No 72
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.79 E-value=2e-08 Score=85.08 Aligned_cols=72 Identities=29% Similarity=0.202 Sum_probs=59.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccC-CEEEEccc
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQV-DVRFIPSE 82 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~-d~~f~ps~ 82 (231)
|+|||||||||||++++++|+++|++|++++|...... ....++.++.+|++|.+.+.++++++ |++++...
T Consensus 1 ~~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~------~~~~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa 73 (314)
T COG0451 1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLD------PLLSGVEFVVLDLTDRDLVDELAKGVPDAVIHLAA 73 (314)
T ss_pred CeEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCcccc------ccccccceeeecccchHHHHHHHhcCCCEEEEccc
Confidence 35999999999999999999999999999999764211 00046788999999999999999988 99888544
No 73
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.78 E-value=2.6e-08 Score=81.95 Aligned_cols=79 Identities=13% Similarity=0.091 Sum_probs=58.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc--------
Q 043777 2 AGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------- 73 (231)
Q Consensus 2 ~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------- 73 (231)
.++++++||||+|+||+++++.|+++|++|.+..|+... ........+..++.++.+|++|++++.++++.
T Consensus 3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 81 (253)
T PRK08642 3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSED-AAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKP 81 (253)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHH-HHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 345799999999999999999999999999877664321 11111122224677889999999998887764
Q ss_pred CCEEEEcc
Q 043777 74 VDVRFIPS 81 (231)
Q Consensus 74 ~d~~f~ps 81 (231)
+|++++..
T Consensus 82 id~li~~a 89 (253)
T PRK08642 82 ITTVVNNA 89 (253)
T ss_pred CeEEEECC
Confidence 78887754
No 74
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=98.77 E-value=1.6e-08 Score=85.97 Aligned_cols=62 Identities=27% Similarity=0.451 Sum_probs=51.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc--CCEEEEccc
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ--VDVRFIPSE 82 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~--~d~~f~ps~ 82 (231)
|+||||||+||||++++++|+++| +|+++.|... .+.+|++|.+.+.+++++ +|+++|-..
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~----------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa 63 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST----------------DYCGDFSNPEGVAETVRKIRPDVIVNAAA 63 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc----------------cccCCCCCHHHHHHHHHhcCCCEEEECCc
Confidence 589999999999999999999999 7888877531 235799999999999984 799998654
Q ss_pred C
Q 043777 83 Y 83 (231)
Q Consensus 83 ~ 83 (231)
.
T Consensus 64 ~ 64 (299)
T PRK09987 64 H 64 (299)
T ss_pred c
Confidence 3
No 75
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=98.77 E-value=4.8e-08 Score=84.53 Aligned_cols=78 Identities=17% Similarity=0.072 Sum_probs=55.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCC-EEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHcc--CCEEEE
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHP-KFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQ--VDVRFI 79 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~-v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~--~d~~f~ 79 (231)
|+|+|||||||||++++++|+++|+. |+++.|...... ......+. ..+.++.+|++|.+++.+++++ +|++++
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 79 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGN-LESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMH 79 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccch-HHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEE
Confidence 58999999999999999999999976 444444321110 11111111 3467889999999999999975 799888
Q ss_pred cccC
Q 043777 80 PSEY 83 (231)
Q Consensus 80 ps~~ 83 (231)
.+..
T Consensus 80 ~A~~ 83 (352)
T PRK10084 80 LAAE 83 (352)
T ss_pred CCcc
Confidence 6543
No 76
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.76 E-value=3.9e-08 Score=88.14 Aligned_cols=82 Identities=23% Similarity=0.335 Sum_probs=64.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcCCCCc-h-hhhhhhhhc-CCcEEEEEcCCCHHHHHHHHcc--CCE
Q 043777 3 GKSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRDSASN-F-NFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQ--VDV 76 (231)
Q Consensus 3 ~~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~~~~-~-~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~--~d~ 76 (231)
.+|+|+||||+|.||+.+|+++++.+ ..+++++|+.... . ..++...++ ....++-||+.|.+.+.+++++ +|+
T Consensus 249 ~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd~ 328 (588)
T COG1086 249 TGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVDI 328 (588)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCce
Confidence 47899999999999999999999987 4678888876431 1 122222233 5677888999999999999999 999
Q ss_pred EEEcccCC
Q 043777 77 RFIPSEYG 84 (231)
Q Consensus 77 ~f~ps~~g 84 (231)
+||.+.+.
T Consensus 329 VfHAAA~K 336 (588)
T COG1086 329 VFHAAALK 336 (588)
T ss_pred EEEhhhhc
Confidence 99976554
No 77
>PRK07814 short chain dehydrogenase; Provisional
Probab=98.76 E-value=4.2e-08 Score=81.54 Aligned_cols=77 Identities=12% Similarity=0.009 Sum_probs=59.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~ 73 (231)
+++++||||+|+||+++++.|+++|++|++++|+... ..+....+ ..++.++.+|+++++++.++++ .
T Consensus 10 ~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~--~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (263)
T PRK07814 10 DQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQ--LDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGR 87 (263)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999999999999999999999999997532 11111122 2457788999999999887765 4
Q ss_pred CCEEEEccc
Q 043777 74 VDVRFIPSE 82 (231)
Q Consensus 74 ~d~~f~ps~ 82 (231)
+|++++...
T Consensus 88 id~vi~~Ag 96 (263)
T PRK07814 88 LDIVVNNVG 96 (263)
T ss_pred CCEEEECCC
Confidence 688887654
No 78
>PRK12828 short chain dehydrogenase; Provisional
Probab=98.76 E-value=4.9e-08 Score=79.36 Aligned_cols=77 Identities=17% Similarity=0.022 Sum_probs=59.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHc-------cCC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVK-------QVD 75 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~-------~~d 75 (231)
+++++||||+|+||+++++.|+++|+.|++++|+.... .+....+. .++.++.+|+.|.+++.++++ ++|
T Consensus 7 ~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (239)
T PRK12828 7 GKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPL--SQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLD 84 (239)
T ss_pred CCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhH--HHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcC
Confidence 57999999999999999999999999999999975321 11222233 567788999999999887776 468
Q ss_pred EEEEccc
Q 043777 76 VRFIPSE 82 (231)
Q Consensus 76 ~~f~ps~ 82 (231)
++++...
T Consensus 85 ~vi~~ag 91 (239)
T PRK12828 85 ALVNIAG 91 (239)
T ss_pred EEEECCc
Confidence 8877543
No 79
>PRK07102 short chain dehydrogenase; Provisional
Probab=98.76 E-value=2.6e-08 Score=81.68 Aligned_cols=78 Identities=22% Similarity=0.124 Sum_probs=58.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhc-CCcEEEEEcCCCHHHHHHHHcc----CCEEE
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQ----VDVRF 78 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~----~d~~f 78 (231)
|+++||||+|+||++++++|+++|++|++++|+..... ..+.+.... .++.++++|++|.+++.+++++ +|.++
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv 81 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIVL 81 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEEE
Confidence 58999999999999999999999999999999753211 011111111 4678899999999998887765 57777
Q ss_pred Eccc
Q 043777 79 IPSE 82 (231)
Q Consensus 79 ~ps~ 82 (231)
+...
T Consensus 82 ~~ag 85 (243)
T PRK07102 82 IAVG 85 (243)
T ss_pred ECCc
Confidence 6543
No 80
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.75 E-value=4.2e-08 Score=80.14 Aligned_cols=79 Identities=16% Similarity=0.078 Sum_probs=59.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVD 75 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d 75 (231)
+++++||||+|+||++++++|+++|++|++++|+..... ..+.+.....++.++.+|+++++++.++++ .+|
T Consensus 7 ~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 86 (239)
T PRK07666 7 GKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSID 86 (239)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCcc
Confidence 468999999999999999999999999999999753210 011111112457788999999999988886 578
Q ss_pred EEEEccc
Q 043777 76 VRFIPSE 82 (231)
Q Consensus 76 ~~f~ps~ 82 (231)
++++...
T Consensus 87 ~vi~~ag 93 (239)
T PRK07666 87 ILINNAG 93 (239)
T ss_pred EEEEcCc
Confidence 8887543
No 81
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.75 E-value=6.7e-08 Score=79.67 Aligned_cols=78 Identities=14% Similarity=0.078 Sum_probs=58.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~ 73 (231)
+++++||||+|+||+++++.|+++|++|++++|...... .+....+ ..++.++.+|++|++++.++++ .
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEEL-AATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGR 80 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHH-HHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 378999999999999999999999999999988643211 1111222 2457788999999998877665 3
Q ss_pred CCEEEEccc
Q 043777 74 VDVRFIPSE 82 (231)
Q Consensus 74 ~d~~f~ps~ 82 (231)
+|++++...
T Consensus 81 id~vi~~ag 89 (256)
T PRK12745 81 IDCLVNNAG 89 (256)
T ss_pred CCEEEECCc
Confidence 688877543
No 82
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=98.75 E-value=5.1e-08 Score=80.30 Aligned_cols=76 Identities=24% Similarity=0.202 Sum_probs=58.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCEE
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDVR 77 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~~ 77 (231)
|+++||||+|+||+++++.|+++|++|.+++|+... ..........++.++.+|++|.+++.++++ ++|.+
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v 78 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQER--LQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVL 78 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 579999999999999999999999999999997521 111111222467788999999999887765 57888
Q ss_pred EEccc
Q 043777 78 FIPSE 82 (231)
Q Consensus 78 f~ps~ 82 (231)
++.+.
T Consensus 79 i~~ag 83 (248)
T PRK10538 79 VNNAG 83 (248)
T ss_pred EECCC
Confidence 77554
No 83
>PRK08267 short chain dehydrogenase; Provisional
Probab=98.73 E-value=5.3e-08 Score=80.64 Aligned_cols=76 Identities=17% Similarity=0.069 Sum_probs=58.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHcc--------CC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQ--------VD 75 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~--------~d 75 (231)
++++||||+|+||++++++|+++|+.|.+++|+... ..+...... ..+.++.+|++|.+++.+++++ +|
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id 79 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAG--LAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLD 79 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHH--HHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence 589999999999999999999999999999987531 111112222 4678899999999998877663 48
Q ss_pred EEEEccc
Q 043777 76 VRFIPSE 82 (231)
Q Consensus 76 ~~f~ps~ 82 (231)
++++...
T Consensus 80 ~vi~~ag 86 (260)
T PRK08267 80 VLFNNAG 86 (260)
T ss_pred EEEECCC
Confidence 8777543
No 84
>PRK12829 short chain dehydrogenase; Provisional
Probab=98.73 E-value=5.8e-08 Score=80.33 Aligned_cols=78 Identities=17% Similarity=0.063 Sum_probs=59.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777 3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVK-------QV 74 (231)
Q Consensus 3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~-------~~ 74 (231)
+.++++||||+|+||+++++.|+++|++|+++.|+.... .+...... ..+.++.+|++|++++.++++ ++
T Consensus 10 ~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 87 (264)
T PRK12829 10 DGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAAL--AATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGL 87 (264)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 358999999999999999999999999999999975321 11111222 245788999999999887775 47
Q ss_pred CEEEEccc
Q 043777 75 DVRFIPSE 82 (231)
Q Consensus 75 d~~f~ps~ 82 (231)
|.+++...
T Consensus 88 d~vi~~ag 95 (264)
T PRK12829 88 DVLVNNAG 95 (264)
T ss_pred CEEEECCC
Confidence 88887543
No 85
>PRK05866 short chain dehydrogenase; Provisional
Probab=98.73 E-value=5.7e-08 Score=82.31 Aligned_cols=77 Identities=17% Similarity=0.091 Sum_probs=59.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~ 73 (231)
+++++||||+|+||+++++.|+++|++|.+++|+... ..+..+.+ ...+.++.+|++|.+++.++++ .
T Consensus 40 ~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~--l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 117 (293)
T PRK05866 40 GKRILLTGASSGIGEAAAEQFARRGATVVAVARREDL--LDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGG 117 (293)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999999999999999999999999997521 11111122 2346688999999999888887 5
Q ss_pred CCEEEEccc
Q 043777 74 VDVRFIPSE 82 (231)
Q Consensus 74 ~d~~f~ps~ 82 (231)
+|++++...
T Consensus 118 id~li~~AG 126 (293)
T PRK05866 118 VDILINNAG 126 (293)
T ss_pred CCEEEECCC
Confidence 788887544
No 86
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.73 E-value=4.1e-08 Score=80.65 Aligned_cols=79 Identities=18% Similarity=0.100 Sum_probs=56.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEE-EcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------
Q 043777 3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFAL-IRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ------- 73 (231)
Q Consensus 3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~-~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~------- 73 (231)
++++++||||+|+||+++++.|+++|++|+++ .|+..... ..+.++....++.++.+|++|++++.+++++
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR 82 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 36799999999999999999999999998764 55532100 0111111124577889999999998887764
Q ss_pred CCEEEEcc
Q 043777 74 VDVRFIPS 81 (231)
Q Consensus 74 ~d~~f~ps 81 (231)
+|++++..
T Consensus 83 id~vi~~a 90 (250)
T PRK08063 83 LDVFVNNA 90 (250)
T ss_pred CCEEEECC
Confidence 68887754
No 87
>PRK07326 short chain dehydrogenase; Provisional
Probab=98.73 E-value=6.1e-08 Score=78.98 Aligned_cols=77 Identities=18% Similarity=0.183 Sum_probs=59.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVK-------QV 74 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~-------~~ 74 (231)
+++++||||+|++|++++++|+++|++|+++.|+... ..+..+.+. .++.++.+|++|.+++.++++ .+
T Consensus 6 ~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (237)
T PRK07326 6 GKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKE--LEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL 83 (237)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHH--HHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999999999999999999999999999997532 111222222 467789999999999888776 57
Q ss_pred CEEEEccc
Q 043777 75 DVRFIPSE 82 (231)
Q Consensus 75 d~~f~ps~ 82 (231)
|++++...
T Consensus 84 d~vi~~ag 91 (237)
T PRK07326 84 DVLIANAG 91 (237)
T ss_pred CEEEECCC
Confidence 88887643
No 88
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=98.73 E-value=5.4e-08 Score=80.55 Aligned_cols=75 Identities=19% Similarity=0.127 Sum_probs=57.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~ 73 (231)
+++++||||+|+||++++++|+++|++|+++.|+... .+....+ ...+.++.+|++|.+++.++++ .
T Consensus 8 ~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (260)
T PRK12823 8 GKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELV---HEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGR 84 (260)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHH---HHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999999999999999986421 1111222 2346678999999988877665 3
Q ss_pred CCEEEEcc
Q 043777 74 VDVRFIPS 81 (231)
Q Consensus 74 ~d~~f~ps 81 (231)
+|++++..
T Consensus 85 id~lv~nA 92 (260)
T PRK12823 85 IDVLINNV 92 (260)
T ss_pred CeEEEECC
Confidence 68877754
No 89
>PRK06138 short chain dehydrogenase; Provisional
Probab=98.73 E-value=5.9e-08 Score=79.72 Aligned_cols=78 Identities=17% Similarity=0.124 Sum_probs=59.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh--cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777 3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF--HSGVFDYWGLLEDEKSLLEAVK-------Q 73 (231)
Q Consensus 3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~--~~~v~~~~~D~~d~~~l~~al~-------~ 73 (231)
++++++||||+|+||++++++|+++|++|.++.|+.... .+..... ...+.++.+|++|++++.++++ .
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~ 81 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAA--ERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGR 81 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHH--HHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 367899999999999999999999999999999875321 1111112 2456788999999999988776 4
Q ss_pred CCEEEEccc
Q 043777 74 VDVRFIPSE 82 (231)
Q Consensus 74 ~d~~f~ps~ 82 (231)
+|.+++...
T Consensus 82 id~vi~~ag 90 (252)
T PRK06138 82 LDVLVNNAG 90 (252)
T ss_pred CCEEEECCC
Confidence 788887544
No 90
>PRK05693 short chain dehydrogenase; Provisional
Probab=98.72 E-value=6.2e-08 Score=80.95 Aligned_cols=74 Identities=20% Similarity=0.238 Sum_probs=58.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVK-------QVDV 76 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~-------~~d~ 76 (231)
|+++||||+|+||+++++.|+++|++|++++|+... . .... .++..+.+|++|.+++.++++ .+|+
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~---~---~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 75 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAED---V---EALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDV 75 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHH---H---HHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 589999999999999999999999999999987421 1 1222 467788999999998877764 4688
Q ss_pred EEEcccCC
Q 043777 77 RFIPSEYG 84 (231)
Q Consensus 77 ~f~ps~~g 84 (231)
+++.+.++
T Consensus 76 vi~~ag~~ 83 (274)
T PRK05693 76 LINNAGYG 83 (274)
T ss_pred EEECCCCC
Confidence 88866543
No 91
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.72 E-value=4.2e-08 Score=80.48 Aligned_cols=77 Identities=19% Similarity=0.140 Sum_probs=59.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHcc-------C
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQ-------V 74 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~-------~ 74 (231)
+++++||||+|+||++++++|+++|++|++++|+.... ......+. ..+.++.+|+.|.+++.+++++ +
T Consensus 5 ~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK07231 5 GKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAA--ERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV 82 (251)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 57999999999999999999999999999999985321 11112222 3467889999999999887764 5
Q ss_pred CEEEEccc
Q 043777 75 DVRFIPSE 82 (231)
Q Consensus 75 d~~f~ps~ 82 (231)
|++++.+.
T Consensus 83 d~vi~~ag 90 (251)
T PRK07231 83 DILVNNAG 90 (251)
T ss_pred CEEEECCC
Confidence 88877544
No 92
>PRK07890 short chain dehydrogenase; Provisional
Probab=98.72 E-value=3.8e-08 Score=81.26 Aligned_cols=77 Identities=16% Similarity=0.058 Sum_probs=58.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~ 73 (231)
+++++||||+|+||+++++.|+++|+.|.+++|+... ..+....+ ...+..+.+|++|.+++..+++ .
T Consensus 5 ~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (258)
T PRK07890 5 GKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAER--LDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR 82 (258)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 5899999999999999999999999999999987532 11111222 2456789999999999877665 3
Q ss_pred CCEEEEccc
Q 043777 74 VDVRFIPSE 82 (231)
Q Consensus 74 ~d~~f~ps~ 82 (231)
+|++++...
T Consensus 83 ~d~vi~~ag 91 (258)
T PRK07890 83 VDALVNNAF 91 (258)
T ss_pred ccEEEECCc
Confidence 688777543
No 93
>PRK09134 short chain dehydrogenase; Provisional
Probab=98.72 E-value=6.8e-08 Score=79.96 Aligned_cols=79 Identities=18% Similarity=0.117 Sum_probs=58.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHcc------
Q 043777 3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVKQ------ 73 (231)
Q Consensus 3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~~------ 73 (231)
++|+++||||+|+||++++++|++.|++|+++.|..... .......+ ...+.++.+|++|.+++.+++++
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 86 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDE-AEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG 86 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHH-HHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 357899999999999999999999999998877753211 11111122 24577889999999998887764
Q ss_pred -CCEEEEccc
Q 043777 74 -VDVRFIPSE 82 (231)
Q Consensus 74 -~d~~f~ps~ 82 (231)
+|++++...
T Consensus 87 ~iD~vi~~ag 96 (258)
T PRK09134 87 PITLLVNNAS 96 (258)
T ss_pred CCCEEEECCc
Confidence 688877543
No 94
>PRK08265 short chain dehydrogenase; Provisional
Probab=98.72 E-value=5.6e-08 Score=80.73 Aligned_cols=76 Identities=16% Similarity=0.097 Sum_probs=58.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VDV 76 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d~ 76 (231)
+++++||||+|+||++++++|+++|++|++++|+... ..+..+.+...+.++.+|++|.+++.++++. +|+
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 83 (261)
T PRK08265 6 GKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADN--GAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDI 83 (261)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 5799999999999999999999999999999997531 1111222234577889999999998877764 587
Q ss_pred EEEcc
Q 043777 77 RFIPS 81 (231)
Q Consensus 77 ~f~ps 81 (231)
+++..
T Consensus 84 lv~~a 88 (261)
T PRK08265 84 LVNLA 88 (261)
T ss_pred EEECC
Confidence 77644
No 95
>PRK06101 short chain dehydrogenase; Provisional
Probab=98.72 E-value=4.2e-08 Score=80.42 Aligned_cols=67 Identities=21% Similarity=0.232 Sum_probs=53.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQV 74 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~ 74 (231)
++++||||+|+||++++++|+++|++|.+++|+... .+.+.....++.++.+|++|.+++.++++++
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 68 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSV---LDELHTQSANIFTLAFDVTDHPGTKAALSQL 68 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHH---HHHHHHhcCCCeEEEeeCCCHHHHHHHHHhc
Confidence 589999999999999999999999999999997421 1111111245788999999999999998874
No 96
>PRK06172 short chain dehydrogenase; Provisional
Probab=98.72 E-value=5.3e-08 Score=80.27 Aligned_cols=79 Identities=19% Similarity=0.120 Sum_probs=59.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VD 75 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d 75 (231)
.++++||||+|+||++++++|+++|++|.++.|+..... ..+.+......+..+.+|++|.+++.++++. +|
T Consensus 7 ~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id 86 (253)
T PRK06172 7 GKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRLD 86 (253)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence 479999999999999999999999999999999753211 1111122224577889999999998887764 48
Q ss_pred EEEEccc
Q 043777 76 VRFIPSE 82 (231)
Q Consensus 76 ~~f~ps~ 82 (231)
++++.+.
T Consensus 87 ~li~~ag 93 (253)
T PRK06172 87 YAFNNAG 93 (253)
T ss_pred EEEECCC
Confidence 8777544
No 97
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=98.72 E-value=6.2e-08 Score=79.50 Aligned_cols=79 Identities=22% Similarity=0.126 Sum_probs=59.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVD 75 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d 75 (231)
+++++||||+|+||++++++|++.|++|.++.|+..... ..+.+......+.++.+|++|.+++.++++ .+|
T Consensus 3 ~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d 82 (250)
T TIGR03206 3 DKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPVD 82 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 579999999999999999999999999999988753210 001111112457889999999999888776 378
Q ss_pred EEEEccc
Q 043777 76 VRFIPSE 82 (231)
Q Consensus 76 ~~f~ps~ 82 (231)
++++...
T Consensus 83 ~vi~~ag 89 (250)
T TIGR03206 83 VLVNNAG 89 (250)
T ss_pred EEEECCC
Confidence 7777554
No 98
>PRK12937 short chain dehydrogenase; Provisional
Probab=98.72 E-value=7.7e-08 Score=78.71 Aligned_cols=80 Identities=16% Similarity=0.116 Sum_probs=59.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777 3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------Q 73 (231)
Q Consensus 3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~ 73 (231)
+.++++||||+|+||+++++.|+++|+.++++.|+..... ..+.+......+.++.+|++|.+++.++++ +
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR 83 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4589999999999999999999999999888777542111 011111222457788999999999988877 4
Q ss_pred CCEEEEccc
Q 043777 74 VDVRFIPSE 82 (231)
Q Consensus 74 ~d~~f~ps~ 82 (231)
+|++++...
T Consensus 84 id~vi~~ag 92 (245)
T PRK12937 84 IDVLVNNAG 92 (245)
T ss_pred CCEEEECCC
Confidence 788887654
No 99
>PRK08628 short chain dehydrogenase; Provisional
Probab=98.71 E-value=8.7e-08 Score=79.21 Aligned_cols=76 Identities=18% Similarity=0.116 Sum_probs=59.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~ 73 (231)
+++++||||+|+||++++++|+++|+.|++++|+... .+..+.+ ...+.++.+|+++.+++.++++ .
T Consensus 7 ~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (258)
T PRK08628 7 DKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPD---DEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGR 83 (258)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhh---HHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 5789999999999999999999999999999987642 1122222 2457789999999999988776 3
Q ss_pred CCEEEEccc
Q 043777 74 VDVRFIPSE 82 (231)
Q Consensus 74 ~d~~f~ps~ 82 (231)
+|.+++.+.
T Consensus 84 id~vi~~ag 92 (258)
T PRK08628 84 IDGLVNNAG 92 (258)
T ss_pred CCEEEECCc
Confidence 688877654
No 100
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=98.71 E-value=1.7e-07 Score=75.99 Aligned_cols=67 Identities=18% Similarity=0.108 Sum_probs=52.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVK 72 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~ 72 (231)
+|.++|||||++||.+++++|.++|++|++..|+... ..++..++. ..+..+..|++|.+++..+++
T Consensus 6 ~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~dr--L~~la~~~~~~~~~~~~~DVtD~~~~~~~i~ 73 (246)
T COG4221 6 GKVALITGASSGIGEATARALAEAGAKVVLAARREER--LEALADEIGAGAALALALDVTDRAAVEAAIE 73 (246)
T ss_pred CcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHH--HHHHHHhhccCceEEEeeccCCHHHHHHHHH
Confidence 5679999999999999999999999999999998632 122223333 357788999999998766665
No 101
>PRK08643 acetoin reductase; Validated
Probab=98.71 E-value=7.7e-08 Score=79.43 Aligned_cols=78 Identities=17% Similarity=0.184 Sum_probs=59.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~ 73 (231)
+++++||||+|+||+++++.|+++|++|+++.|+.... .+....+ ..++.++.+|++|++++.++++ +
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETA--QAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGD 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 47899999999999999999999999999999875321 1111122 1456778999999998877776 3
Q ss_pred CCEEEEcccC
Q 043777 74 VDVRFIPSEY 83 (231)
Q Consensus 74 ~d~~f~ps~~ 83 (231)
+|++++.+..
T Consensus 80 id~vi~~ag~ 89 (256)
T PRK08643 80 LNVVVNNAGV 89 (256)
T ss_pred CCEEEECCCC
Confidence 6888876543
No 102
>PRK07774 short chain dehydrogenase; Provisional
Probab=98.71 E-value=8.3e-08 Score=78.81 Aligned_cols=78 Identities=13% Similarity=0.084 Sum_probs=59.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~ 73 (231)
.++++||||+|+||++++++|+++|++|+++.|+.... ....+.+ ...+..+.+|++|.+++.++++ .
T Consensus 6 ~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (250)
T PRK07774 6 DKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGA--ERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGG 83 (250)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 57899999999999999999999999999999975321 1111222 1356778999999998877665 4
Q ss_pred CCEEEEcccC
Q 043777 74 VDVRFIPSEY 83 (231)
Q Consensus 74 ~d~~f~ps~~ 83 (231)
+|++++....
T Consensus 84 id~vi~~ag~ 93 (250)
T PRK07774 84 IDYLVNNAAI 93 (250)
T ss_pred CCEEEECCCC
Confidence 7888885543
No 103
>PRK08263 short chain dehydrogenase; Provisional
Probab=98.71 E-value=4.7e-08 Score=81.77 Aligned_cols=79 Identities=20% Similarity=0.253 Sum_probs=59.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------
Q 043777 1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ------- 73 (231)
Q Consensus 1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~------- 73 (231)
|+ +++|+||||+|+||++++++|+++|+.|++++|+... ...........+..+.+|++|.+++.++++.
T Consensus 1 ~~-~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 77 (275)
T PRK08263 1 MM-EKVWFITGASRGFGRAWTEAALERGDRVVATARDTAT--LADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGR 77 (275)
T ss_pred CC-CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 54 5789999999999999999999999999999987531 1111112224577889999999998777653
Q ss_pred CCEEEEccc
Q 043777 74 VDVRFIPSE 82 (231)
Q Consensus 74 ~d~~f~ps~ 82 (231)
+|.+++...
T Consensus 78 ~d~vi~~ag 86 (275)
T PRK08263 78 LDIVVNNAG 86 (275)
T ss_pred CCEEEECCC
Confidence 688777543
No 104
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=98.71 E-value=2.4e-07 Score=76.56 Aligned_cols=69 Identities=25% Similarity=0.229 Sum_probs=54.2
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHccCCE
Q 043777 6 NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQVDV 76 (231)
Q Consensus 6 ~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~~d~ 76 (231)
.+-|.|||||+|+.++.+|.+.|-+|++-.|.....+ ..++-.. ..+-+...|+.|++++.++++...+
T Consensus 63 VaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~--r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNV 133 (391)
T KOG2865|consen 63 VATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDP--RHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNV 133 (391)
T ss_pred EEEEecccccccHHHHHHHhhcCCeEEEeccCCccch--hheeecccccceeeeccCCCCHHHHHHHHHhCcE
Confidence 4568899999999999999999999999999653322 1122222 4566788999999999999998766
No 105
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=98.71 E-value=3.9e-07 Score=76.40 Aligned_cols=34 Identities=32% Similarity=0.508 Sum_probs=31.4
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC
Q 043777 7 VLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS 40 (231)
Q Consensus 7 ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~ 40 (231)
|+|||||||||+++++.|+++|++|++++|+...
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 34 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPA 34 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCC
Confidence 6899999999999999999999999999997643
No 106
>PRK05717 oxidoreductase; Validated
Probab=98.71 E-value=6.3e-08 Score=80.02 Aligned_cols=78 Identities=17% Similarity=0.112 Sum_probs=58.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VDV 76 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d~ 76 (231)
+++++||||+|+||+++++.|+++|++|.+++|+... ..+..+.+...+.++.+|++|.+++.++++. +|+
T Consensus 10 ~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 87 (255)
T PRK05717 10 GRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRER--GSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA 87 (255)
T ss_pred CCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHH--HHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 5789999999999999999999999999998876421 1111122224577889999999988665543 688
Q ss_pred EEEcccC
Q 043777 77 RFIPSEY 83 (231)
Q Consensus 77 ~f~ps~~ 83 (231)
+++....
T Consensus 88 li~~ag~ 94 (255)
T PRK05717 88 LVCNAAI 94 (255)
T ss_pred EEECCCc
Confidence 8876543
No 107
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=98.70 E-value=6.6e-08 Score=79.83 Aligned_cols=78 Identities=17% Similarity=0.146 Sum_probs=59.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc-------
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ------- 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~------- 73 (231)
+++++||||+|+||++++++|+++|++|+++.|+... ..+....+. ..+..+.+|++|.+++.+++++
T Consensus 10 ~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (255)
T PRK07523 10 GRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAK--LAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGP 87 (255)
T ss_pred CCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 5799999999999999999999999999999987532 111222222 2367789999999998888764
Q ss_pred CCEEEEcccC
Q 043777 74 VDVRFIPSEY 83 (231)
Q Consensus 74 ~d~~f~ps~~ 83 (231)
+|++++....
T Consensus 88 ~d~li~~ag~ 97 (255)
T PRK07523 88 IDILVNNAGM 97 (255)
T ss_pred CCEEEECCCC
Confidence 6787775543
No 108
>PRK06914 short chain dehydrogenase; Provisional
Probab=98.70 E-value=5.4e-08 Score=81.49 Aligned_cols=79 Identities=18% Similarity=0.124 Sum_probs=57.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhc--CCcEEEEEcCCCHHHHHHHHcc----
Q 043777 1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQ---- 73 (231)
Q Consensus 1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~---- 73 (231)
|. +++++||||+|++|+++++.|+++|+.|++++|+..... ..+...... ..+.++.+|++|++++.+ +++
T Consensus 1 ~~-~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~ 78 (280)
T PRK06914 1 MN-KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKE 78 (280)
T ss_pred CC-CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHh
Confidence 55 578999999999999999999999999999998753211 011111111 357788999999998876 433
Q ss_pred ---CCEEEEcc
Q 043777 74 ---VDVRFIPS 81 (231)
Q Consensus 74 ---~d~~f~ps 81 (231)
+|.+++..
T Consensus 79 ~~~id~vv~~a 89 (280)
T PRK06914 79 IGRIDLLVNNA 89 (280)
T ss_pred cCCeeEEEECC
Confidence 57777654
No 109
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.70 E-value=7.4e-08 Score=78.76 Aligned_cols=78 Identities=15% Similarity=0.137 Sum_probs=59.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEE-EcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFAL-IRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK------- 72 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~-~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~------- 72 (231)
+++++||||+|+||+++++.|++.|++|+++ .|+.... ......+ ...+.++.+|++|.+++.++++
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAA--QELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFG 82 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHH--HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 4689999999999999999999999999888 7764321 1111111 1357788999999999888776
Q ss_pred cCCEEEEcccC
Q 043777 73 QVDVRFIPSEY 83 (231)
Q Consensus 73 ~~d~~f~ps~~ 83 (231)
.+|++++....
T Consensus 83 ~id~vi~~ag~ 93 (247)
T PRK05565 83 KIDILVNNAGI 93 (247)
T ss_pred CCCEEEECCCc
Confidence 58888875543
No 110
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=98.69 E-value=5.5e-08 Score=79.97 Aligned_cols=75 Identities=16% Similarity=0.118 Sum_probs=56.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------QV 74 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~~ 74 (231)
++++||||+|+||+++++.|+++|++|++++|+.... .+....+ ...+.++.+|+.|.+++.++++ ++
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 79 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGA--EAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGL 79 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 5899999999999999999999999999999975321 1111111 2457788999999997765554 46
Q ss_pred CEEEEcc
Q 043777 75 DVRFIPS 81 (231)
Q Consensus 75 d~~f~ps 81 (231)
|.+++..
T Consensus 80 d~vi~~a 86 (255)
T TIGR01963 80 DILVNNA 86 (255)
T ss_pred CEEEECC
Confidence 8877754
No 111
>PRK07074 short chain dehydrogenase; Provisional
Probab=98.69 E-value=8.3e-08 Score=79.28 Aligned_cols=77 Identities=30% Similarity=0.303 Sum_probs=59.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHcc-------CC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQ-------VD 75 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~-------~d 75 (231)
+++++||||+|+||+++++.|+++|++|++++|+... .....+.+. .++.++.+|++|.+++.+++.+ +|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 79 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAA--LAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVD 79 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 3689999999999999999999999999999987532 111122222 4577889999999999887764 68
Q ss_pred EEEEccc
Q 043777 76 VRFIPSE 82 (231)
Q Consensus 76 ~~f~ps~ 82 (231)
.+++...
T Consensus 80 ~vi~~ag 86 (257)
T PRK07074 80 VLVANAG 86 (257)
T ss_pred EEEECCC
Confidence 8777544
No 112
>PRK08251 short chain dehydrogenase; Provisional
Probab=98.69 E-value=9e-08 Score=78.58 Aligned_cols=80 Identities=15% Similarity=0.100 Sum_probs=58.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhh-hc-CCcEEEEEcCCCHHHHHHHHc-------c
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRV-FH-SGVFDYWGLLEDEKSLLEAVK-------Q 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~-~~-~~v~~~~~D~~d~~~l~~al~-------~ 73 (231)
+++++||||+|+||++++++|+++|++|.+++|+..... ..+.+.. .. ..+.++.+|++|.+++.++++ .
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999999999999999999999753211 0111111 11 356778999999998877665 4
Q ss_pred CCEEEEcccC
Q 043777 74 VDVRFIPSEY 83 (231)
Q Consensus 74 ~d~~f~ps~~ 83 (231)
+|++++....
T Consensus 82 id~vi~~ag~ 91 (248)
T PRK08251 82 LDRVIVNAGI 91 (248)
T ss_pred CCEEEECCCc
Confidence 7888876543
No 113
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=98.69 E-value=6.3e-08 Score=82.96 Aligned_cols=77 Identities=16% Similarity=0.096 Sum_probs=59.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc-------
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ------- 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~------- 73 (231)
+++++||||+|+||++++++|+++|++|++++|+... ..+....+. ..+.++.+|++|.+++.++++.
T Consensus 6 ~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 83 (322)
T PRK07453 6 KGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKK--AEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKP 83 (322)
T ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 6789999999999999999999999999999987532 111112221 3577889999999998887764
Q ss_pred CCEEEEccc
Q 043777 74 VDVRFIPSE 82 (231)
Q Consensus 74 ~d~~f~ps~ 82 (231)
+|++++...
T Consensus 84 iD~li~nAg 92 (322)
T PRK07453 84 LDALVCNAA 92 (322)
T ss_pred ccEEEECCc
Confidence 788777544
No 114
>PLN02253 xanthoxin dehydrogenase
Probab=98.68 E-value=1.2e-07 Score=79.53 Aligned_cols=77 Identities=16% Similarity=0.088 Sum_probs=59.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVK-------QV 74 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~-------~~ 74 (231)
+++++||||+|+||++++++|+++|++|++++|+... ..+....+. .++.++++|++|.+++.++++ .+
T Consensus 18 ~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~i 95 (280)
T PLN02253 18 GKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDL--GQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTL 95 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 5789999999999999999999999999999886421 111122222 357789999999999988876 47
Q ss_pred CEEEEccc
Q 043777 75 DVRFIPSE 82 (231)
Q Consensus 75 d~~f~ps~ 82 (231)
|++++...
T Consensus 96 d~li~~Ag 103 (280)
T PLN02253 96 DIMVNNAG 103 (280)
T ss_pred CEEEECCC
Confidence 88877543
No 115
>PRK06924 short chain dehydrogenase; Provisional
Probab=98.68 E-value=5.1e-08 Score=80.21 Aligned_cols=69 Identities=16% Similarity=0.179 Sum_probs=53.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQV 74 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~ 74 (231)
++++||||+|+||++++++|+++|++|.+++|+.... ..+..+....++.++.+|++|.+++.++++.+
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 70 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKE-LTKLAEQYNSNLTFHSLDLQDVHELETNFNEI 70 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHH-HHHHHhccCCceEEEEecCCCHHHHHHHHHHH
Confidence 5899999999999999999999999999999875211 11111111246778999999999998887653
No 116
>PRK05875 short chain dehydrogenase; Provisional
Probab=98.68 E-value=8.1e-08 Score=80.24 Aligned_cols=79 Identities=15% Similarity=0.074 Sum_probs=58.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhc--CCcEEEEEcCCCHHHHHHHHc-------c
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFH--SGVFDYWGLLEDEKSLLEAVK-------Q 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~-------~ 73 (231)
+++++||||+|+||+++++.|+++|++|.++.|+..... ..+.+.... ..+.++.+|++|++++.++++ .
T Consensus 7 ~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 86 (276)
T PRK05875 7 DRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHGR 86 (276)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 579999999999999999999999999999998753210 011111111 356778899999999888776 4
Q ss_pred CCEEEEccc
Q 043777 74 VDVRFIPSE 82 (231)
Q Consensus 74 ~d~~f~ps~ 82 (231)
+|++++...
T Consensus 87 ~d~li~~ag 95 (276)
T PRK05875 87 LHGVVHCAG 95 (276)
T ss_pred CCEEEECCC
Confidence 788887543
No 117
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.68 E-value=1.6e-07 Score=77.63 Aligned_cols=74 Identities=16% Similarity=0.178 Sum_probs=57.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHcc-------CC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQ-------VD 75 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~-------~d 75 (231)
+++++||||+|+||++++++|.+.|++|.++.|+... ..+.+. .++.++.+|++|++++.++++. +|
T Consensus 7 ~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~-----~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (255)
T PRK06463 7 GKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAEN-----EAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVD 81 (255)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHH-----HHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 4789999999999999999999999999887765421 112222 4678899999999998887763 68
Q ss_pred EEEEccc
Q 043777 76 VRFIPSE 82 (231)
Q Consensus 76 ~~f~ps~ 82 (231)
.+++...
T Consensus 82 ~li~~ag 88 (255)
T PRK06463 82 VLVNNAG 88 (255)
T ss_pred EEEECCC
Confidence 8776543
No 118
>PRK07024 short chain dehydrogenase; Provisional
Probab=98.68 E-value=1.1e-07 Score=78.71 Aligned_cols=77 Identities=19% Similarity=0.179 Sum_probs=58.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHcc-------C
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQ-------V 74 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~-------~ 74 (231)
+++++||||+|+||+++++.|+++|++|++++|+... ..+..+.+. ..+.++.+|++|.+++.++++. +
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~i 79 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDA--LQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLP 79 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 3789999999999999999999999999999987421 111112222 2577889999999999887764 6
Q ss_pred CEEEEccc
Q 043777 75 DVRFIPSE 82 (231)
Q Consensus 75 d~~f~ps~ 82 (231)
|++++.+.
T Consensus 80 d~lv~~ag 87 (257)
T PRK07024 80 DVVIANAG 87 (257)
T ss_pred CEEEECCC
Confidence 88877554
No 119
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=98.68 E-value=1.3e-07 Score=78.35 Aligned_cols=79 Identities=14% Similarity=0.037 Sum_probs=59.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV 76 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~ 76 (231)
+++++||||+|+||++++++|++.|+.|.++.|+.......+.+......+.++.+|+++.+++.++++ .+|.
T Consensus 15 ~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~ 94 (258)
T PRK06935 15 GKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKIDI 94 (258)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 578999999999999999999999999999998731111111122222457789999999999888776 4688
Q ss_pred EEEccc
Q 043777 77 RFIPSE 82 (231)
Q Consensus 77 ~f~ps~ 82 (231)
.++...
T Consensus 95 li~~ag 100 (258)
T PRK06935 95 LVNNAG 100 (258)
T ss_pred EEECCC
Confidence 777543
No 120
>PRK12746 short chain dehydrogenase; Provisional
Probab=98.67 E-value=1e-07 Score=78.57 Aligned_cols=77 Identities=18% Similarity=0.104 Sum_probs=56.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEE-EcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHc-------
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFAL-IRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVK------- 72 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~-~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~------- 72 (231)
+++++||||+|+||+++++.|+++|+.|.++ .|+.. +..+....+. ..+.++.+|++|.+++.++++
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~ 83 (254)
T PRK12746 6 GKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQ--AADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ 83 (254)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHH--HHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence 4799999999999999999999999998775 45431 1111112221 356788999999999988776
Q ss_pred ------cCCEEEEccc
Q 043777 73 ------QVDVRFIPSE 82 (231)
Q Consensus 73 ------~~d~~f~ps~ 82 (231)
++|++++...
T Consensus 84 ~~~~~~~id~vi~~ag 99 (254)
T PRK12746 84 IRVGTSEIDILVNNAG 99 (254)
T ss_pred cccCCCCccEEEECCC
Confidence 3788777543
No 121
>PRK07023 short chain dehydrogenase; Provisional
Probab=98.67 E-value=7.4e-08 Score=78.97 Aligned_cols=64 Identities=14% Similarity=0.115 Sum_probs=50.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK 72 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~ 72 (231)
|+++||||+|+||++++++|+++|++|.+++|+... ........++.++++|++|.+++.+++.
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 65 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHP----SLAAAAGERLAEVELDLSDAAAAAAWLA 65 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcch----hhhhccCCeEEEEEeccCCHHHHHHHHH
Confidence 589999999999999999999999999999997531 1111112457788999999999887553
No 122
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=98.67 E-value=1.3e-07 Score=78.46 Aligned_cols=77 Identities=22% Similarity=0.140 Sum_probs=58.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VDV 76 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d~ 76 (231)
+++++||||+|+||++++++|+++|++|+++.|+... ..+....+...+.++++|++|.+++.++++. +|+
T Consensus 6 ~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 83 (263)
T PRK06200 6 GQVALITGGGSGIGRALVERFLAEGARVAVLERSAEK--LASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC 83 (263)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 5799999999999999999999999999999987421 1111122224577889999999988777653 687
Q ss_pred EEEccc
Q 043777 77 RFIPSE 82 (231)
Q Consensus 77 ~f~ps~ 82 (231)
+++...
T Consensus 84 li~~ag 89 (263)
T PRK06200 84 FVGNAG 89 (263)
T ss_pred EEECCC
Confidence 776544
No 123
>PRK08226 short chain dehydrogenase; Provisional
Probab=98.67 E-value=1.2e-07 Score=78.69 Aligned_cols=79 Identities=18% Similarity=0.079 Sum_probs=58.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VDV 76 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d~ 76 (231)
+++++||||+|+||++++++|+++|++|+++.|+.......+.+......+.++.+|+++.+++.++++. +|.
T Consensus 6 ~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~ 85 (263)
T PRK08226 6 GKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDI 85 (263)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 5799999999999999999999999999999987521111111111113567789999999998887764 588
Q ss_pred EEEccc
Q 043777 77 RFIPSE 82 (231)
Q Consensus 77 ~f~ps~ 82 (231)
+++...
T Consensus 86 vi~~ag 91 (263)
T PRK08226 86 LVNNAG 91 (263)
T ss_pred EEECCC
Confidence 777544
No 124
>PRK08264 short chain dehydrogenase; Validated
Probab=98.66 E-value=1.9e-07 Score=76.15 Aligned_cols=74 Identities=24% Similarity=0.222 Sum_probs=60.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc---CCEEEE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ---VDVRFI 79 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~---~d~~f~ 79 (231)
.++++||||+|+||+++++.|+++|+ .|.++.|+... . .....++.++.+|++|.+++.++++. +|++++
T Consensus 6 ~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~---~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~ 79 (238)
T PRK08264 6 GKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPES---V---TDLGPRVVPLQLDVTDPASVAAAAEAASDVTILVN 79 (238)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhh---h---hhcCCceEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence 46899999999999999999999998 99999997531 1 11225688899999999999888875 688887
Q ss_pred cccC
Q 043777 80 PSEY 83 (231)
Q Consensus 80 ps~~ 83 (231)
....
T Consensus 80 ~ag~ 83 (238)
T PRK08264 80 NAGI 83 (238)
T ss_pred CCCc
Confidence 6544
No 125
>PRK12743 oxidoreductase; Provisional
Probab=98.66 E-value=1.5e-07 Score=77.82 Aligned_cols=80 Identities=13% Similarity=-0.065 Sum_probs=58.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------C
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------V 74 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~ 74 (231)
+++++||||+|+||++++++|+++|+.|.++.|+..... ..+.+......+.++.+|++|.+++.++++. +
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999999999999988876542211 0111111224578899999999988776653 6
Q ss_pred CEEEEcccC
Q 043777 75 DVRFIPSEY 83 (231)
Q Consensus 75 d~~f~ps~~ 83 (231)
|.+++....
T Consensus 82 d~li~~ag~ 90 (256)
T PRK12743 82 DVLVNNAGA 90 (256)
T ss_pred CEEEECCCC
Confidence 888775543
No 126
>PRK12939 short chain dehydrogenase; Provisional
Probab=98.66 E-value=1.2e-07 Score=77.64 Aligned_cols=79 Identities=18% Similarity=0.024 Sum_probs=58.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVD 75 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d 75 (231)
+++++||||+|+||+++++.|+++|+.|.++.|+..... ..+.++.....+.++.+|++|.+++.++++ ++|
T Consensus 7 ~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 86 (250)
T PRK12939 7 GKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGLD 86 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 578999999999999999999999999999988643210 011111111457788999999999887774 478
Q ss_pred EEEEccc
Q 043777 76 VRFIPSE 82 (231)
Q Consensus 76 ~~f~ps~ 82 (231)
++++...
T Consensus 87 ~vi~~ag 93 (250)
T PRK12939 87 GLVNNAG 93 (250)
T ss_pred EEEECCC
Confidence 8877543
No 127
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=98.66 E-value=2.9e-08 Score=83.26 Aligned_cols=77 Identities=27% Similarity=0.356 Sum_probs=52.7
Q ss_pred EEEEcCCChhHHHHHHHHHhCC-CCEEEEEcCCCCchhhhhhhhh----c-CCcEE----EEEcCCCHHHHHHHHc--cC
Q 043777 7 VLVIGAIGRIGYHFTRRSIEYG-HPKFALIRDSASNFNFSLLRVF----H-SGVFD----YWGLLEDEKSLLEAVK--QV 74 (231)
Q Consensus 7 ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~~~~~~~~~~~~~----~-~~v~~----~~~D~~d~~~l~~al~--~~ 74 (231)
||||||+|.||+.++++|++.+ ..+++++|+... ......++ . .++.+ +.+|++|.+.+.++++ ++
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~--l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~p 78 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENK--LYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKP 78 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHH--HHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhH--HHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCC
Confidence 7999999999999999999988 568899987542 11111222 2 34543 4789999999999999 79
Q ss_pred CEEEEcccCCC
Q 043777 75 DVRFIPSEYGA 85 (231)
Q Consensus 75 d~~f~ps~~g~ 85 (231)
|++||.+.+-.
T Consensus 79 diVfHaAA~Kh 89 (293)
T PF02719_consen 79 DIVFHAAALKH 89 (293)
T ss_dssp SEEEE------
T ss_pred CEEEEChhcCC
Confidence 99999876543
No 128
>PRK07478 short chain dehydrogenase; Provisional
Probab=98.66 E-value=1.3e-07 Score=78.13 Aligned_cols=77 Identities=18% Similarity=0.122 Sum_probs=58.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~ 73 (231)
+++++||||+|+||++++++|.++|++|.+++|+... ..+..+.+ ...+.++.+|++|.+++.++++ .
T Consensus 6 ~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (254)
T PRK07478 6 GKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAE--LDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGG 83 (254)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 4789999999999999999999999999999997532 11111222 2356788999999998887776 4
Q ss_pred CCEEEEccc
Q 043777 74 VDVRFIPSE 82 (231)
Q Consensus 74 ~d~~f~ps~ 82 (231)
+|++++...
T Consensus 84 id~li~~ag 92 (254)
T PRK07478 84 LDIAFNNAG 92 (254)
T ss_pred CCEEEECCC
Confidence 688776543
No 129
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=98.65 E-value=1.4e-07 Score=78.28 Aligned_cols=77 Identities=21% Similarity=0.164 Sum_probs=57.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV 76 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~ 76 (231)
+++++||||+|+||++++++|+++|++|+++.|+... ..+........+..+.+|++|.+++.++++ .+|+
T Consensus 5 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 82 (262)
T TIGR03325 5 GEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAG--LQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDC 82 (262)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 5899999999999999999999999999999986421 111111112457788999999988877665 3688
Q ss_pred EEEccc
Q 043777 77 RFIPSE 82 (231)
Q Consensus 77 ~f~ps~ 82 (231)
+++...
T Consensus 83 li~~Ag 88 (262)
T TIGR03325 83 LIPNAG 88 (262)
T ss_pred EEECCC
Confidence 777543
No 130
>PRK05876 short chain dehydrogenase; Provisional
Probab=98.65 E-value=1.1e-07 Score=79.76 Aligned_cols=78 Identities=13% Similarity=0.072 Sum_probs=59.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc-------
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ------- 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~------- 73 (231)
+++++||||+|+||+++++.|+++|++|++..|+... ..+..+.+. ..+.++.+|++|.+++.++++.
T Consensus 6 ~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~--l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 83 (275)
T PRK05876 6 GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPG--LRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH 83 (275)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999999999999999999999999887532 111222222 3467789999999999887764
Q ss_pred CCEEEEcccC
Q 043777 74 VDVRFIPSEY 83 (231)
Q Consensus 74 ~d~~f~ps~~ 83 (231)
+|++++....
T Consensus 84 id~li~nAg~ 93 (275)
T PRK05876 84 VDVVFSNAGI 93 (275)
T ss_pred CCEEEECCCc
Confidence 6887775543
No 131
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=98.65 E-value=1.4e-07 Score=78.00 Aligned_cols=76 Identities=16% Similarity=0.070 Sum_probs=58.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VDV 76 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d~ 76 (231)
+++++||||+|+||+++++.|+++|++|+++.|+... ..+..+.....+.++.+|++|.+++.++++. +|+
T Consensus 6 ~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (257)
T PRK07067 6 GKVALLTGAASGIGEAVAERYLAEGARVVIADIKPAR--ARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDI 83 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHH--HHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 5789999999999999999999999999999987532 1111122234577889999999998887763 687
Q ss_pred EEEcc
Q 043777 77 RFIPS 81 (231)
Q Consensus 77 ~f~ps 81 (231)
+++..
T Consensus 84 li~~a 88 (257)
T PRK07067 84 LFNNA 88 (257)
T ss_pred EEECC
Confidence 77644
No 132
>PRK07904 short chain dehydrogenase; Provisional
Probab=98.65 E-value=1.8e-07 Score=77.44 Aligned_cols=76 Identities=16% Similarity=0.125 Sum_probs=55.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcCCCC-ch-hhhhhhhhc-CCcEEEEEcCCCHHHHHHHHc------c
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRDSAS-NF-NFSLLRVFH-SGVFDYWGLLEDEKSLLEAVK------Q 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~~~-~~-~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~------~ 73 (231)
.++|+||||+|+||++++++|+++| ++|+++.|+.+. .. ..+.+.... .++.++.+|++|++++.++++ +
T Consensus 8 ~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g~ 87 (253)
T PRK07904 8 PQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGGD 87 (253)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcCC
Confidence 5789999999999999999999995 899999997642 11 111111212 367889999999988665554 4
Q ss_pred CCEEEE
Q 043777 74 VDVRFI 79 (231)
Q Consensus 74 ~d~~f~ 79 (231)
+|..++
T Consensus 88 id~li~ 93 (253)
T PRK07904 88 VDVAIV 93 (253)
T ss_pred CCEEEE
Confidence 787665
No 133
>PRK12827 short chain dehydrogenase; Provisional
Probab=98.64 E-value=2.4e-07 Score=75.81 Aligned_cols=79 Identities=14% Similarity=0.077 Sum_probs=58.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc------
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK------ 72 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~------ 72 (231)
+|+++||||+|+||+++++.|+++|++|+++.|....+. ..+....+ ...+.++.+|++|.+++.++++
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 85 (249)
T PRK12827 6 SRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEF 85 (249)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 579999999999999999999999999998877532211 11111122 2456788999999999888774
Q ss_pred -cCCEEEEccc
Q 043777 73 -QVDVRFIPSE 82 (231)
Q Consensus 73 -~~d~~f~ps~ 82 (231)
++|.+++.+.
T Consensus 86 ~~~d~vi~~ag 96 (249)
T PRK12827 86 GRLDILVNNAG 96 (249)
T ss_pred CCCCEEEECCC
Confidence 3788877554
No 134
>PRK06181 short chain dehydrogenase; Provisional
Probab=98.64 E-value=1.5e-07 Score=78.07 Aligned_cols=78 Identities=14% Similarity=0.064 Sum_probs=58.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV 76 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~ 76 (231)
++++||||+|+||+++++.|+++|++|++++|+..... ..+.+......+.++.+|++|.+++.++++ ++|+
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 81 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDI 81 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 58999999999999999999999999999998743210 011111112456788999999999888776 4688
Q ss_pred EEEccc
Q 043777 77 RFIPSE 82 (231)
Q Consensus 77 ~f~ps~ 82 (231)
+++...
T Consensus 82 vi~~ag 87 (263)
T PRK06181 82 LVNNAG 87 (263)
T ss_pred EEECCC
Confidence 877543
No 135
>PRK08278 short chain dehydrogenase; Provisional
Probab=98.64 E-value=2.8e-07 Score=77.11 Aligned_cols=80 Identities=15% Similarity=0.180 Sum_probs=59.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-----hhhh---hhhhcCCcEEEEEcCCCHHHHHHHHc---
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-----NFSL---LRVFHSGVFDYWGLLEDEKSLLEAVK--- 72 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-----~~~~---~~~~~~~v~~~~~D~~d~~~l~~al~--- 72 (231)
+++++||||+|+||+++++.|+++|++|+++.|+..... ..+. +......+.++.+|+++.+++.++++
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~ 85 (273)
T PRK08278 6 GKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAV 85 (273)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence 478999999999999999999999999999999753211 0011 11112456788999999999887776
Q ss_pred ----cCCEEEEcccC
Q 043777 73 ----QVDVRFIPSEY 83 (231)
Q Consensus 73 ----~~d~~f~ps~~ 83 (231)
.+|.+++.+.+
T Consensus 86 ~~~g~id~li~~ag~ 100 (273)
T PRK08278 86 ERFGGIDICVNNASA 100 (273)
T ss_pred HHhCCCCEEEECCCC
Confidence 46888876544
No 136
>PRK06057 short chain dehydrogenase; Provisional
Probab=98.64 E-value=2e-07 Score=77.01 Aligned_cols=75 Identities=17% Similarity=0.096 Sum_probs=57.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VDV 76 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d~ 76 (231)
+++|+||||+|+||++++++|+++|++|++++|+... ..+..+. .+..++.+|++|.+++.++++. +|+
T Consensus 7 ~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~--~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06057 7 GRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEA--GKAAADE--VGGLFVPTDVTDEDAVNALFDTAAETYGSVDI 82 (255)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHH--cCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 5789999999999999999999999999999986421 0111111 2235788999999998887763 688
Q ss_pred EEEccc
Q 043777 77 RFIPSE 82 (231)
Q Consensus 77 ~f~ps~ 82 (231)
+++.+.
T Consensus 83 vi~~ag 88 (255)
T PRK06057 83 AFNNAG 88 (255)
T ss_pred EEECCC
Confidence 777544
No 137
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=98.63 E-value=1.1e-07 Score=78.70 Aligned_cols=77 Identities=14% Similarity=0.072 Sum_probs=57.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~ 73 (231)
+++++||||+|+||+++++.|+++|++|++++|+... .......+ ...+.++.+|++|++++.++++ .
T Consensus 12 ~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~--~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~ 89 (259)
T PRK08213 12 GKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEE--LEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH 89 (259)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5899999999999999999999999999999986421 11111122 1356788999999999876664 3
Q ss_pred CCEEEEccc
Q 043777 74 VDVRFIPSE 82 (231)
Q Consensus 74 ~d~~f~ps~ 82 (231)
+|.+++.+.
T Consensus 90 id~vi~~ag 98 (259)
T PRK08213 90 VDILVNNAG 98 (259)
T ss_pred CCEEEECCC
Confidence 688877544
No 138
>PRK06196 oxidoreductase; Provisional
Probab=98.63 E-value=1.8e-07 Score=80.01 Aligned_cols=76 Identities=18% Similarity=0.142 Sum_probs=58.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV 76 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~ 76 (231)
+++|+||||+|+||++++++|+++|++|++++|+... ..+....+ .++.++.+|++|.+++.++++ ++|+
T Consensus 26 ~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~--~~~~~~~l-~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~ 102 (315)
T PRK06196 26 GKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDV--AREALAGI-DGVEVVMLDLADLESVRAFAERFLDSGRRIDI 102 (315)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHh-hhCeEEEccCCCHHHHHHHHHHHHhcCCCCCE
Confidence 4789999999999999999999999999999997531 11111111 347889999999999887764 3788
Q ss_pred EEEccc
Q 043777 77 RFIPSE 82 (231)
Q Consensus 77 ~f~ps~ 82 (231)
+++...
T Consensus 103 li~nAg 108 (315)
T PRK06196 103 LINNAG 108 (315)
T ss_pred EEECCC
Confidence 777543
No 139
>PRK05854 short chain dehydrogenase; Provisional
Probab=98.63 E-value=1.3e-07 Score=80.95 Aligned_cols=79 Identities=16% Similarity=0.116 Sum_probs=58.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhh-hc-CCcEEEEEcCCCHHHHHHHHcc-------
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRV-FH-SGVFDYWGLLEDEKSLLEAVKQ------- 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~-~~-~~v~~~~~D~~d~~~l~~al~~------- 73 (231)
+++++||||+|+||.+++++|+++|+.|++++|+..... ..+.+.. .. ..+.++.+|++|.+++.++++.
T Consensus 14 gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~~ 93 (313)
T PRK05854 14 GKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGRP 93 (313)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 579999999999999999999999999999999753210 1111111 11 3577889999999998877654
Q ss_pred CCEEEEccc
Q 043777 74 VDVRFIPSE 82 (231)
Q Consensus 74 ~d~~f~ps~ 82 (231)
+|+.++...
T Consensus 94 iD~li~nAG 102 (313)
T PRK05854 94 IHLLINNAG 102 (313)
T ss_pred ccEEEECCc
Confidence 677776443
No 140
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=98.63 E-value=1.8e-07 Score=77.32 Aligned_cols=78 Identities=12% Similarity=0.038 Sum_probs=58.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VDV 76 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d~ 76 (231)
+++++||||+|+||++++++|+++|++|+++.|+... ...+.++....++.++.+|++|.+++.++++. +|+
T Consensus 8 ~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~ 86 (251)
T PRK12481 8 GKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAP-ETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI 86 (251)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHH-HHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 5789999999999999999999999999988875421 11112222224577889999999998887763 687
Q ss_pred EEEccc
Q 043777 77 RFIPSE 82 (231)
Q Consensus 77 ~f~ps~ 82 (231)
.++...
T Consensus 87 lv~~ag 92 (251)
T PRK12481 87 LINNAG 92 (251)
T ss_pred EEECCC
Confidence 776543
No 141
>PRK07063 short chain dehydrogenase; Provisional
Probab=98.63 E-value=1.8e-07 Score=77.52 Aligned_cols=79 Identities=22% Similarity=0.090 Sum_probs=58.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhh--hcCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRV--FHSGVFDYWGLLEDEKSLLEAVK-------Q 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~--~~~~v~~~~~D~~d~~~l~~al~-------~ 73 (231)
+++++||||+|+||++++++|+++|++|++++|+..... ..+.+.. ....+.++.+|++|++++.++++ .
T Consensus 7 ~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 86 (260)
T PRK07063 7 GKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFGP 86 (260)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 578999999999999999999999999999999653210 1111111 11346788999999999888776 4
Q ss_pred CCEEEEccc
Q 043777 74 VDVRFIPSE 82 (231)
Q Consensus 74 ~d~~f~ps~ 82 (231)
+|.+++...
T Consensus 87 id~li~~ag 95 (260)
T PRK07063 87 LDVLVNNAG 95 (260)
T ss_pred CcEEEECCC
Confidence 788777544
No 142
>PRK05867 short chain dehydrogenase; Provisional
Probab=98.63 E-value=1.5e-07 Score=77.70 Aligned_cols=76 Identities=14% Similarity=0.118 Sum_probs=57.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~ 73 (231)
+++++||||+|+||++++++|+++|++|.++.|+... ..+..+.+ ..++..+.+|++|++++.++++ .
T Consensus 9 ~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 86 (253)
T PRK05867 9 GKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDA--LEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGG 86 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHH--HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5789999999999999999999999999999886432 11111222 1356678999999999887765 4
Q ss_pred CCEEEEcc
Q 043777 74 VDVRFIPS 81 (231)
Q Consensus 74 ~d~~f~ps 81 (231)
+|++++..
T Consensus 87 id~lv~~a 94 (253)
T PRK05867 87 IDIAVCNA 94 (253)
T ss_pred CCEEEECC
Confidence 78877644
No 143
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=98.62 E-value=2.3e-07 Score=76.13 Aligned_cols=80 Identities=15% Similarity=0.085 Sum_probs=56.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QV 74 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~ 74 (231)
+++++||||+|+||+.+++.|+++|++|.++.++..... ..+.+......+.++.+|++|.+++.++++ .+
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL 81 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence 378999999999999999999999999877665432111 011111112457789999999998877665 36
Q ss_pred CEEEEcccC
Q 043777 75 DVRFIPSEY 83 (231)
Q Consensus 75 d~~f~ps~~ 83 (231)
|++++.+..
T Consensus 82 d~li~~ag~ 90 (248)
T PRK06947 82 DALVNNAGI 90 (248)
T ss_pred CEEEECCcc
Confidence 887775543
No 144
>PRK07109 short chain dehydrogenase; Provisional
Probab=98.62 E-value=1.9e-07 Score=80.67 Aligned_cols=79 Identities=15% Similarity=0.122 Sum_probs=58.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVD 75 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d 75 (231)
+++++||||+|+||++++++|+++|++|++++|+..... ..+.+......+.++.+|++|.+++.++++ .+|
T Consensus 8 ~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD 87 (334)
T PRK07109 8 RQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPID 87 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCCC
Confidence 468999999999999999999999999999999742100 011111112456778999999999888765 378
Q ss_pred EEEEccc
Q 043777 76 VRFIPSE 82 (231)
Q Consensus 76 ~~f~ps~ 82 (231)
+.++...
T Consensus 88 ~lInnAg 94 (334)
T PRK07109 88 TWVNNAM 94 (334)
T ss_pred EEEECCC
Confidence 8776543
No 145
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.62 E-value=2.7e-07 Score=75.75 Aligned_cols=80 Identities=13% Similarity=0.088 Sum_probs=57.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QV 74 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~ 74 (231)
+++++||||+|+||++++++|+++|++|++..|+..... ....+......+..+.+|+++.+++.++++ .+
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 85 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVA 85 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCC
Confidence 579999999999999999999999999888776532110 011111112345678899999998877766 36
Q ss_pred CEEEEcccC
Q 043777 75 DVRFIPSEY 83 (231)
Q Consensus 75 d~~f~ps~~ 83 (231)
|++++....
T Consensus 86 d~vi~~ag~ 94 (252)
T PRK06077 86 DILVNNAGL 94 (252)
T ss_pred CEEEECCCC
Confidence 888876543
No 146
>PRK06483 dihydromonapterin reductase; Provisional
Probab=98.62 E-value=1.4e-07 Score=77.06 Aligned_cols=74 Identities=14% Similarity=0.219 Sum_probs=57.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHcc-------CC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQ-------VD 75 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~-------~d 75 (231)
+++++||||+|+||++++++|+++|++|+++.|+... ..+.+. .++.++.+|++|.+++.++++. +|
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 76 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYP-----AIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLR 76 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchh-----HHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCcc
Confidence 3789999999999999999999999999999997532 111222 4578899999999988776654 57
Q ss_pred EEEEccc
Q 043777 76 VRFIPSE 82 (231)
Q Consensus 76 ~~f~ps~ 82 (231)
++++...
T Consensus 77 ~lv~~ag 83 (236)
T PRK06483 77 AIIHNAS 83 (236)
T ss_pred EEEECCc
Confidence 7666443
No 147
>PRK07775 short chain dehydrogenase; Provisional
Probab=98.62 E-value=1.5e-07 Score=78.79 Aligned_cols=77 Identities=18% Similarity=0.110 Sum_probs=57.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~ 73 (231)
.++++||||+|+||+++++.|+++|+.|.++.|+... ..+....+ ...+.++.+|++|.+++.++++ .
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELAAAGFPVALGARRVEK--CEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE 87 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 4689999999999999999999999999998886421 11111111 1346678899999999988776 3
Q ss_pred CCEEEEccc
Q 043777 74 VDVRFIPSE 82 (231)
Q Consensus 74 ~d~~f~ps~ 82 (231)
+|.+++.+.
T Consensus 88 id~vi~~Ag 96 (274)
T PRK07775 88 IEVLVSGAG 96 (274)
T ss_pred CCEEEECCC
Confidence 688777553
No 148
>PRK06949 short chain dehydrogenase; Provisional
Probab=98.62 E-value=1.8e-07 Score=77.24 Aligned_cols=77 Identities=19% Similarity=0.104 Sum_probs=58.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHcc-------
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVKQ------- 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~~------- 73 (231)
+++++||||+|+||+++++.|+++|+.|+++.|+... ..+....+ ..++.++.+|+++.+++.++++.
T Consensus 9 ~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~--~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 9 GKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVER--LKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT 86 (258)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 5899999999999999999999999999999997532 11111111 24577899999999998887764
Q ss_pred CCEEEEccc
Q 043777 74 VDVRFIPSE 82 (231)
Q Consensus 74 ~d~~f~ps~ 82 (231)
+|++++-..
T Consensus 87 ~d~li~~ag 95 (258)
T PRK06949 87 IDILVNNSG 95 (258)
T ss_pred CCEEEECCC
Confidence 688776443
No 149
>PRK06398 aldose dehydrogenase; Validated
Probab=98.62 E-value=3e-07 Score=76.23 Aligned_cols=69 Identities=14% Similarity=0.162 Sum_probs=56.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV 76 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~ 76 (231)
+++++||||+|+||++++++|+++|++|+++.|+... ...+..+.+|++|++++.++++ .+|+
T Consensus 6 gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~----------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~ 75 (258)
T PRK06398 6 DKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS----------YNDVDYFKVDVSNKEQVIKGIDYVISKYGRIDI 75 (258)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc----------cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4789999999999999999999999999999987521 0256788999999999887776 3688
Q ss_pred EEEccc
Q 043777 77 RFIPSE 82 (231)
Q Consensus 77 ~f~ps~ 82 (231)
+++...
T Consensus 76 li~~Ag 81 (258)
T PRK06398 76 LVNNAG 81 (258)
T ss_pred EEECCC
Confidence 777543
No 150
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=98.61 E-value=2.2e-07 Score=76.27 Aligned_cols=79 Identities=15% Similarity=0.095 Sum_probs=58.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc-------
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ------- 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~------- 73 (231)
+++++||||+|+||++++++|+++|+.|+++.|+... ...+..+.+. .++.++.+|++|.+++.++++.
T Consensus 6 ~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (247)
T PRK12935 6 GKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKE-AAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK 84 (247)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHH-HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999999999999999999998876554321 1111112222 3577889999999999888876
Q ss_pred CCEEEEcccC
Q 043777 74 VDVRFIPSEY 83 (231)
Q Consensus 74 ~d~~f~ps~~ 83 (231)
+|++++...+
T Consensus 85 id~vi~~ag~ 94 (247)
T PRK12935 85 VDILVNNAGI 94 (247)
T ss_pred CCEEEECCCC
Confidence 6888886544
No 151
>PRK05650 short chain dehydrogenase; Provisional
Probab=98.61 E-value=2.1e-07 Score=77.60 Aligned_cols=76 Identities=16% Similarity=0.115 Sum_probs=57.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------QV 74 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~~ 74 (231)
|+++||||+|+||++++++|+++|++|.+.+|+... ..+....+ ...+.++.+|++|.+++.++++ .+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 78 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEG--GEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGI 78 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 479999999999999999999999999999987532 11111122 2456788999999998887775 47
Q ss_pred CEEEEccc
Q 043777 75 DVRFIPSE 82 (231)
Q Consensus 75 d~~f~ps~ 82 (231)
|++++...
T Consensus 79 d~lI~~ag 86 (270)
T PRK05650 79 DVIVNNAG 86 (270)
T ss_pred CEEEECCC
Confidence 88777544
No 152
>PRK06197 short chain dehydrogenase; Provisional
Probab=98.61 E-value=1.3e-07 Score=80.46 Aligned_cols=79 Identities=15% Similarity=0.056 Sum_probs=58.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhh-hhc-CCcEEEEEcCCCHHHHHHHHc-------c
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLR-VFH-SGVFDYWGLLEDEKSLLEAVK-------Q 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~-~~~-~~v~~~~~D~~d~~~l~~al~-------~ 73 (231)
+++|+||||+|+||++++++|+++|++|+++.|+..... ..+.+. ... ..+.++.+|++|.+++.++++ .
T Consensus 16 ~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~ 95 (306)
T PRK06197 16 GRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYPR 95 (306)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCCC
Confidence 478999999999999999999999999999999753210 011111 111 356788999999999887765 3
Q ss_pred CCEEEEccc
Q 043777 74 VDVRFIPSE 82 (231)
Q Consensus 74 ~d~~f~ps~ 82 (231)
+|++++.+.
T Consensus 96 iD~li~nAg 104 (306)
T PRK06197 96 IDLLINNAG 104 (306)
T ss_pred CCEEEECCc
Confidence 688777543
No 153
>PRK08177 short chain dehydrogenase; Provisional
Probab=98.61 E-value=2e-07 Score=75.57 Aligned_cols=74 Identities=24% Similarity=0.312 Sum_probs=57.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-----cCCEEEE
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-----QVDVRFI 79 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-----~~d~~f~ 79 (231)
++++||||+|++|+++++.|+++|++|.+++|+... .+.+... .++.++.+|++|.+++.++++ ++|++++
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~---~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~ 77 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQ---DTALQAL-PGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFV 77 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcc---hHHHHhc-cccceEEcCCCCHHHHHHHHHHhhcCCCCEEEE
Confidence 589999999999999999999999999999997642 1111121 457788899999998877776 3788887
Q ss_pred ccc
Q 043777 80 PSE 82 (231)
Q Consensus 80 ps~ 82 (231)
.+.
T Consensus 78 ~ag 80 (225)
T PRK08177 78 NAG 80 (225)
T ss_pred cCc
Confidence 543
No 154
>PRK08017 oxidoreductase; Provisional
Probab=98.61 E-value=1.3e-07 Score=77.91 Aligned_cols=75 Identities=20% Similarity=0.216 Sum_probs=56.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc--------CCE
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ--------VDV 76 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~--------~d~ 76 (231)
++++||||+|+||+++++.|+++|++|+++.|+... .+.+.. .++..+.+|++|.+++.++++. +|.
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~---~~~~~~--~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ 77 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDD---VARMNS--LGFTGILLDLDDPESVERAADEVIALTDNRLYG 77 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH---hHHHHh--CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeE
Confidence 689999999999999999999999999999987521 111111 4678899999999887766543 355
Q ss_pred EEEcccCC
Q 043777 77 RFIPSEYG 84 (231)
Q Consensus 77 ~f~ps~~g 84 (231)
+++.+.++
T Consensus 78 ii~~ag~~ 85 (256)
T PRK08017 78 LFNNAGFG 85 (256)
T ss_pred EEECCCCC
Confidence 66655443
No 155
>PRK06841 short chain dehydrogenase; Provisional
Probab=98.61 E-value=2.5e-07 Score=76.23 Aligned_cols=76 Identities=16% Similarity=0.090 Sum_probs=58.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHcc-------CC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQ-------VD 75 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~-------~d 75 (231)
+++++||||+|+||+++++.|+++|+.|+++.|+... .+...... ..+..+.+|+++.+++.+++++ +|
T Consensus 15 ~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~---~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d 91 (255)
T PRK06841 15 GKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV---AEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRID 91 (255)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 5789999999999999999999999999999987531 11112222 4566889999999988877753 68
Q ss_pred EEEEccc
Q 043777 76 VRFIPSE 82 (231)
Q Consensus 76 ~~f~ps~ 82 (231)
++++...
T Consensus 92 ~vi~~ag 98 (255)
T PRK06841 92 ILVNSAG 98 (255)
T ss_pred EEEECCC
Confidence 8777544
No 156
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=98.61 E-value=1.2e-07 Score=77.94 Aligned_cols=77 Identities=17% Similarity=0.116 Sum_probs=57.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV 76 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~ 76 (231)
+++++||||+|+||++++++|+++|+.|+++.|+... ...+.+......+.++.+|+++.+++.++++ .+|+
T Consensus 5 ~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 83 (248)
T TIGR01832 5 GKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPS-ETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI 83 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHH-HHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 5899999999999999999999999999999986421 1111122222457889999999999887665 3677
Q ss_pred EEEcc
Q 043777 77 RFIPS 81 (231)
Q Consensus 77 ~f~ps 81 (231)
+++..
T Consensus 84 li~~a 88 (248)
T TIGR01832 84 LVNNA 88 (248)
T ss_pred EEECC
Confidence 66643
No 157
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=98.60 E-value=1e-06 Score=74.74 Aligned_cols=67 Identities=16% Similarity=0.161 Sum_probs=46.6
Q ss_pred EEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc----cCCEEEE
Q 043777 7 VLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK----QVDVRFI 79 (231)
Q Consensus 7 ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~----~~d~~f~ 79 (231)
|+||||||+||+++++.|+++|+ .|.++.|..... .+.. .....+.+|+++.+.+..+.+ ++|++++
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~----~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh 72 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH----KFLN--LADLVIADYIDKEDFLDRLEKGAFGKIEAIFH 72 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch----hhhh--hhheeeeccCcchhHHHHHHhhccCCCCEEEE
Confidence 68999999999999999999997 687777654211 0111 112345677877777766654 6787665
No 158
>PRK12744 short chain dehydrogenase; Provisional
Probab=98.60 E-value=3.9e-07 Score=75.32 Aligned_cols=79 Identities=14% Similarity=0.127 Sum_probs=57.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc------
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK------ 72 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~------ 72 (231)
+++++||||+|+||+++++.|+++|++|.++.++..... ..+..+.+ ...+.++++|++|.+++.++++
T Consensus 8 ~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 87 (257)
T PRK12744 8 GKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAF 87 (257)
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhh
Confidence 478999999999999999999999999777776532211 11111222 2356788999999999887776
Q ss_pred -cCCEEEEccc
Q 043777 73 -QVDVRFIPSE 82 (231)
Q Consensus 73 -~~d~~f~ps~ 82 (231)
.+|++++...
T Consensus 88 ~~id~li~~ag 98 (257)
T PRK12744 88 GRPDIAINTVG 98 (257)
T ss_pred CCCCEEEECCc
Confidence 3688777554
No 159
>PRK07856 short chain dehydrogenase; Provisional
Probab=98.60 E-value=1.7e-07 Score=77.24 Aligned_cols=71 Identities=20% Similarity=0.093 Sum_probs=57.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VDV 76 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d~ 76 (231)
.++++||||+|+||++++++|+++|++|++++|+... .....++.++++|++|.+++.++++. +|+
T Consensus 6 ~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~-------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 78 (252)
T PRK07856 6 GRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE-------TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDV 78 (252)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh-------hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 5789999999999999999999999999999997521 11124677899999999998887764 488
Q ss_pred EEEcc
Q 043777 77 RFIPS 81 (231)
Q Consensus 77 ~f~ps 81 (231)
+++..
T Consensus 79 vi~~a 83 (252)
T PRK07856 79 LVNNA 83 (252)
T ss_pred EEECC
Confidence 88754
No 160
>PRK06500 short chain dehydrogenase; Provisional
Probab=98.60 E-value=2.5e-07 Score=75.80 Aligned_cols=77 Identities=18% Similarity=0.137 Sum_probs=57.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV 76 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~ 76 (231)
+++++||||+|+||++++++|+++|+.|+++.|+... ..+..+.+...+.++++|++|.+++..+++ .+|+
T Consensus 6 ~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (249)
T PRK06500 6 GKTALITGGTSGIGLETARQFLAEGARVAITGRDPAS--LEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDA 83 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHH--HHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4799999999999999999999999999999886421 111122223456788999999887765544 4788
Q ss_pred EEEccc
Q 043777 77 RFIPSE 82 (231)
Q Consensus 77 ~f~ps~ 82 (231)
+++...
T Consensus 84 vi~~ag 89 (249)
T PRK06500 84 VFINAG 89 (249)
T ss_pred EEECCC
Confidence 887544
No 161
>PRK06114 short chain dehydrogenase; Provisional
Probab=98.60 E-value=2.7e-07 Score=76.26 Aligned_cols=78 Identities=12% Similarity=0.042 Sum_probs=58.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHcc-------
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVKQ------- 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~~------- 73 (231)
.++++||||+|+||++++++|.++|++|.++.|+..... .+..+.+ ...+..+.+|++|++++.++++.
T Consensus 8 ~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~-~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 86 (254)
T PRK06114 8 GQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGL-AETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA 86 (254)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHH-HHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 578999999999999999999999999999998753211 1111222 23567889999999998877764
Q ss_pred CCEEEEccc
Q 043777 74 VDVRFIPSE 82 (231)
Q Consensus 74 ~d~~f~ps~ 82 (231)
+|++++...
T Consensus 87 id~li~~ag 95 (254)
T PRK06114 87 LTLAVNAAG 95 (254)
T ss_pred CCEEEECCC
Confidence 577776543
No 162
>PRK07576 short chain dehydrogenase; Provisional
Probab=98.60 E-value=1.4e-07 Score=78.55 Aligned_cols=78 Identities=17% Similarity=0.100 Sum_probs=57.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VD 75 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d 75 (231)
+++++||||+|+||++++++|+++|+.|+++.|+..... ..+.+.....++.++.+|++|++++.+++++ +|
T Consensus 9 ~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~iD 88 (264)
T PRK07576 9 GKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPID 88 (264)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 468999999999999999999999999999998753210 0111111123567789999999998887765 58
Q ss_pred EEEEcc
Q 043777 76 VRFIPS 81 (231)
Q Consensus 76 ~~f~ps 81 (231)
++++..
T Consensus 89 ~vi~~a 94 (264)
T PRK07576 89 VLVSGA 94 (264)
T ss_pred EEEECC
Confidence 777643
No 163
>PRK07577 short chain dehydrogenase; Provisional
Probab=98.60 E-value=3.3e-07 Score=74.47 Aligned_cols=71 Identities=23% Similarity=0.192 Sum_probs=57.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc------cC
Q 043777 1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK------QV 74 (231)
Q Consensus 1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~------~~ 74 (231)
|. .++++||||+|+||+++++.|+++|++|+++.|+... . ....++.+|++|.+++.++++ ++
T Consensus 1 ~~-~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~--------~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 69 (234)
T PRK07577 1 MS-SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID--------D--FPGELFACDLADIEQTAATLAQINEIHPV 69 (234)
T ss_pred CC-CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc--------c--cCceEEEeeCCCHHHHHHHHHHHHHhCCC
Confidence 44 5789999999999999999999999999999997531 1 122578899999998887776 46
Q ss_pred CEEEEccc
Q 043777 75 DVRFIPSE 82 (231)
Q Consensus 75 d~~f~ps~ 82 (231)
|++++.+.
T Consensus 70 d~vi~~ag 77 (234)
T PRK07577 70 DAIVNNVG 77 (234)
T ss_pred cEEEECCC
Confidence 88777544
No 164
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=98.59 E-value=2e-07 Score=77.99 Aligned_cols=77 Identities=14% Similarity=0.122 Sum_probs=57.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~ 73 (231)
.++++||||+|+||++++++|+++|++|.++.|+... ..+..+.+ ..++.++++|++|.+++..+++ .
T Consensus 10 ~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 87 (278)
T PRK08277 10 GKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEK--AEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGP 87 (278)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999999999999999987431 11111222 1346788999999998877665 4
Q ss_pred CCEEEEccc
Q 043777 74 VDVRFIPSE 82 (231)
Q Consensus 74 ~d~~f~ps~ 82 (231)
+|++++...
T Consensus 88 id~li~~ag 96 (278)
T PRK08277 88 CDILINGAG 96 (278)
T ss_pred CCEEEECCC
Confidence 788777543
No 165
>PRK12367 short chain dehydrogenase; Provisional
Probab=98.59 E-value=3.8e-07 Score=75.38 Aligned_cols=76 Identities=18% Similarity=0.085 Sum_probs=59.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEcccC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSEY 83 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~~ 83 (231)
+++++||||+|+||++++++|+++|++|+++.|+.... .. .........+.+|++|.+++.+.+.++|+.++.+..
T Consensus 14 ~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~--~~--~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~ 89 (245)
T PRK12367 14 GKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINN--SE--SNDESPNEWIKWECGKEESLDKQLASLDVLILNHGI 89 (245)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhh--hh--hhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCcc
Confidence 47899999999999999999999999999999875211 10 011122356789999999999999889998886644
No 166
>PRK07825 short chain dehydrogenase; Provisional
Probab=98.59 E-value=1.2e-07 Score=79.11 Aligned_cols=76 Identities=17% Similarity=0.002 Sum_probs=56.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VDV 76 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d~ 76 (231)
+++++||||||+||++++++|+++|++|.+..|+... ..+....+ ..+.++.+|++|++++.++++. +|+
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~--~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEAL--AKETAAEL-GLVVGGPLDVTDPASFAAFLDAVEADLGPIDV 81 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHh-ccceEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 5789999999999999999999999999999886421 11111111 2477889999999988776654 567
Q ss_pred EEEccc
Q 043777 77 RFIPSE 82 (231)
Q Consensus 77 ~f~ps~ 82 (231)
+++...
T Consensus 82 li~~ag 87 (273)
T PRK07825 82 LVNNAG 87 (273)
T ss_pred EEECCC
Confidence 666543
No 167
>PRK06128 oxidoreductase; Provisional
Probab=98.59 E-value=2.8e-07 Score=78.21 Aligned_cols=79 Identities=16% Similarity=0.035 Sum_probs=57.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhh---hhhhhhcCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNF---SLLRVFHSGVFDYWGLLEDEKSLLEAVK-------Q 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~---~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~ 73 (231)
+++++||||+|+||+++++.|+++|++|.+..|+....... +.++.....+.++.+|++|.+++.++++ .
T Consensus 55 ~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 134 (300)
T PRK06128 55 GRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELGG 134 (300)
T ss_pred CCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhCC
Confidence 47899999999999999999999999998877754321111 1111222456778999999998877765 4
Q ss_pred CCEEEEccc
Q 043777 74 VDVRFIPSE 82 (231)
Q Consensus 74 ~d~~f~ps~ 82 (231)
+|++++...
T Consensus 135 iD~lV~nAg 143 (300)
T PRK06128 135 LDILVNIAG 143 (300)
T ss_pred CCEEEECCc
Confidence 688877554
No 168
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=98.58 E-value=3.2e-07 Score=81.02 Aligned_cols=77 Identities=22% Similarity=0.185 Sum_probs=60.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEccc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSE 82 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~ 82 (231)
+++++||||+|+||++++++|.++|++|.+++|+... ..........++..+.+|++|.+++.+.+.++|+.++...
T Consensus 178 gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~--l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAG 254 (406)
T PRK07424 178 GKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDK--ITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHG 254 (406)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCC
Confidence 5789999999999999999999999999999987421 1111111113466788999999999999999999887543
No 169
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=98.58 E-value=2e-07 Score=76.86 Aligned_cols=77 Identities=14% Similarity=0.135 Sum_probs=57.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc-------
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ------- 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~------- 73 (231)
+++++||||+|+||++++++|+++|++|+++.|+... ..+....+. ..+..+.+|++|.+++.++++.
T Consensus 9 ~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 86 (254)
T PRK08085 9 GKNILITGSAQGIGFLLATGLAEYGAEIIINDITAER--AELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP 86 (254)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHH--HHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 5789999999999999999999999999999987532 111112222 3456788999999998877653
Q ss_pred CCEEEEccc
Q 043777 74 VDVRFIPSE 82 (231)
Q Consensus 74 ~d~~f~ps~ 82 (231)
+|.+++...
T Consensus 87 id~vi~~ag 95 (254)
T PRK08085 87 IDVLINNAG 95 (254)
T ss_pred CCEEEECCC
Confidence 687777543
No 170
>PRK08339 short chain dehydrogenase; Provisional
Probab=98.58 E-value=2.7e-07 Score=76.88 Aligned_cols=76 Identities=17% Similarity=0.145 Sum_probs=57.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh----cCCcEEEEEcCCCHHHHHHHHcc------
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF----HSGVFDYWGLLEDEKSLLEAVKQ------ 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~----~~~v~~~~~D~~d~~~l~~al~~------ 73 (231)
.++++||||+|+||++++++|+++|++|.+++|+... ..+..+.+ ..++..+.+|++|++++.++++.
T Consensus 8 ~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~ 85 (263)
T PRK08339 8 GKLAFTTASSKGIGFGVARVLARAGADVILLSRNEEN--LKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGE 85 (263)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCC
Confidence 4789999999999999999999999999999987432 11111121 13577889999999998887763
Q ss_pred CCEEEEcc
Q 043777 74 VDVRFIPS 81 (231)
Q Consensus 74 ~d~~f~ps 81 (231)
+|+.++..
T Consensus 86 iD~lv~na 93 (263)
T PRK08339 86 PDIFFFST 93 (263)
T ss_pred CcEEEECC
Confidence 67766544
No 171
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=98.58 E-value=2.9e-07 Score=76.51 Aligned_cols=77 Identities=17% Similarity=0.130 Sum_probs=58.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc-------
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ------- 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~------- 73 (231)
.++++||||+|+||++++++|+++|++|+++.|+.... .+....+. .++.++.+|++|.+++.+++..
T Consensus 10 ~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (265)
T PRK07097 10 GKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELV--DKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGV 87 (265)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHH--HHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 47899999999999999999999999999988865321 11112222 3577889999999998887764
Q ss_pred CCEEEEccc
Q 043777 74 VDVRFIPSE 82 (231)
Q Consensus 74 ~d~~f~ps~ 82 (231)
+|++++...
T Consensus 88 id~li~~ag 96 (265)
T PRK07097 88 IDILVNNAG 96 (265)
T ss_pred CCEEEECCC
Confidence 688776544
No 172
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=98.58 E-value=3.2e-07 Score=74.96 Aligned_cols=78 Identities=19% Similarity=0.053 Sum_probs=57.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV 76 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~ 76 (231)
+++++||||+|+||++++++|+++|+.|.+..|+... ..+.......++.++.+|++|.+++.++++ .+|.
T Consensus 6 ~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (245)
T PRK12936 6 GRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEK--LEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI 83 (245)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHH--HHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 5799999999999999999999999988777776421 111112222457788999999999887754 3788
Q ss_pred EEEcccC
Q 043777 77 RFIPSEY 83 (231)
Q Consensus 77 ~f~ps~~ 83 (231)
+++.+..
T Consensus 84 vi~~ag~ 90 (245)
T PRK12936 84 LVNNAGI 90 (245)
T ss_pred EEECCCC
Confidence 8775543
No 173
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=98.58 E-value=3.9e-07 Score=74.67 Aligned_cols=81 Identities=20% Similarity=0.161 Sum_probs=57.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHc-----
Q 043777 1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVK----- 72 (231)
Q Consensus 1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~----- 72 (231)
|+ ++.++||||+|+||++++++|+++|+.|++..+..... ..+.++.+. ..+..+.+|++|.+++.++++
T Consensus 1 ~~-~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (246)
T PRK12938 1 MS-QRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPR-RVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAE 78 (246)
T ss_pred CC-CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHH-HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45 67899999999999999999999999988765432211 111222222 345667899999998877765
Q ss_pred --cCCEEEEcccC
Q 043777 73 --QVDVRFIPSEY 83 (231)
Q Consensus 73 --~~d~~f~ps~~ 83 (231)
.+|++++....
T Consensus 79 ~~~id~li~~ag~ 91 (246)
T PRK12938 79 VGEIDVLVNNAGI 91 (246)
T ss_pred hCCCCEEEECCCC
Confidence 47888875543
No 174
>PRK09072 short chain dehydrogenase; Provisional
Probab=98.57 E-value=2.2e-07 Score=77.13 Aligned_cols=78 Identities=17% Similarity=0.089 Sum_probs=59.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh--cCCcEEEEEcCCCHHHHHHHHc------cCC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF--HSGVFDYWGLLEDEKSLLEAVK------QVD 75 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~--~~~v~~~~~D~~d~~~l~~al~------~~d 75 (231)
+++++||||+|+||++++++|+++|++|++++|+... ..+....+ ...+.++.+|++|.+++.++++ .+|
T Consensus 5 ~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id 82 (263)
T PRK09072 5 DKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEK--LEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGIN 82 (263)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence 5789999999999999999999999999999997431 11111121 2467889999999998877655 368
Q ss_pred EEEEcccC
Q 043777 76 VRFIPSEY 83 (231)
Q Consensus 76 ~~f~ps~~ 83 (231)
.+++.+..
T Consensus 83 ~lv~~ag~ 90 (263)
T PRK09072 83 VLINNAGV 90 (263)
T ss_pred EEEECCCC
Confidence 88876543
No 175
>PRK06523 short chain dehydrogenase; Provisional
Probab=98.57 E-value=2.3e-07 Score=76.73 Aligned_cols=71 Identities=20% Similarity=0.135 Sum_probs=56.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV 76 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~ 76 (231)
+++++||||+|+||++++++|.++|++|+++.|+... .....+.++.+|++|.+++.++++ .+|+
T Consensus 9 ~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~--------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 80 (260)
T PRK06523 9 GKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPD--------DLPEGVEFVAADLTTAEGCAAVARAVLERLGGVDI 80 (260)
T ss_pred CCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhh--------hcCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4789999999999999999999999999999997521 112457789999999998776554 3688
Q ss_pred EEEccc
Q 043777 77 RFIPSE 82 (231)
Q Consensus 77 ~f~ps~ 82 (231)
+++...
T Consensus 81 vi~~ag 86 (260)
T PRK06523 81 LVHVLG 86 (260)
T ss_pred EEECCc
Confidence 777543
No 176
>PRK05884 short chain dehydrogenase; Provisional
Probab=98.57 E-value=2.6e-07 Score=75.09 Aligned_cols=72 Identities=19% Similarity=0.012 Sum_probs=55.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc----cCCEEEEc
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK----QVDVRFIP 80 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~----~~d~~f~p 80 (231)
|+++||||+|+||+++++.|.++|++|+++.|+... ..+..+. .++.++++|++|++++.++++ .+|..++.
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~--~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ 76 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDD--LEVAAKE--LDVDAIVCDNTDPASLEEARGLFPHHLDTIVNV 76 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHh--ccCcEEecCCCCHHHHHHHHHHHhhcCcEEEEC
Confidence 479999999999999999999999999999987421 0111111 246788999999999988776 36877764
No 177
>PRK08589 short chain dehydrogenase; Validated
Probab=98.57 E-value=1.5e-07 Score=78.76 Aligned_cols=76 Identities=17% Similarity=0.125 Sum_probs=57.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHcc-------
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVKQ------- 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~~------- 73 (231)
+++++||||+|+||++++++|+++|+.|+++.|+ .. . .+....+ ...+..+.+|++|.+++.++++.
T Consensus 6 ~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~-~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (272)
T PRK08589 6 NKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EA-V-SETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR 82 (272)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HH-H-HHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 5789999999999999999999999999999997 22 1 1112222 23577889999999988776653
Q ss_pred CCEEEEccc
Q 043777 74 VDVRFIPSE 82 (231)
Q Consensus 74 ~d~~f~ps~ 82 (231)
+|++++...
T Consensus 83 id~li~~Ag 91 (272)
T PRK08589 83 VDVLFNNAG 91 (272)
T ss_pred cCEEEECCC
Confidence 577776543
No 178
>PRK06123 short chain dehydrogenase; Provisional
Probab=98.56 E-value=4.2e-07 Score=74.53 Aligned_cols=78 Identities=13% Similarity=0.089 Sum_probs=56.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------QV 74 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~~ 74 (231)
++++||||+|+||++++++|+++|+.|++..|+... ...+....+ ...+.++.+|++|.+++.++++ .+
T Consensus 3 ~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 3 KVMIITGASRGIGAATALLAAERGYAVCLNYLRNRD-AAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHH-HHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 689999999999999999999999988776654311 111111122 2346688999999999888776 36
Q ss_pred CEEEEcccC
Q 043777 75 DVRFIPSEY 83 (231)
Q Consensus 75 d~~f~ps~~ 83 (231)
|++++...+
T Consensus 82 d~li~~ag~ 90 (248)
T PRK06123 82 DALVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 887775543
No 179
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=98.56 E-value=2.8e-07 Score=76.10 Aligned_cols=79 Identities=13% Similarity=0.069 Sum_probs=57.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VD 75 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d 75 (231)
+++|+||||+|+||++++++|.++|+.|++++|+..... ..+.+......+.++.+|++|.+++.++++. +|
T Consensus 11 ~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d 90 (255)
T PRK06113 11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKVD 90 (255)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 579999999999999999999999999999888643210 1111111123567789999999998876653 57
Q ss_pred EEEEccc
Q 043777 76 VRFIPSE 82 (231)
Q Consensus 76 ~~f~ps~ 82 (231)
++++.+.
T Consensus 91 ~li~~ag 97 (255)
T PRK06113 91 ILVNNAG 97 (255)
T ss_pred EEEECCC
Confidence 7777544
No 180
>PRK06701 short chain dehydrogenase; Provisional
Probab=98.56 E-value=5e-07 Score=76.39 Aligned_cols=79 Identities=15% Similarity=0.051 Sum_probs=58.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------C
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------V 74 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~ 74 (231)
+|+++||||+|+||++++++|+++|++|+++.|+..... ....+......+.++.+|++|.+++.++++. +
T Consensus 46 ~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~i 125 (290)
T PRK06701 46 GKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGRL 125 (290)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999999999999999988753211 1111111113467889999999988877753 6
Q ss_pred CEEEEccc
Q 043777 75 DVRFIPSE 82 (231)
Q Consensus 75 d~~f~ps~ 82 (231)
|++++...
T Consensus 126 D~lI~~Ag 133 (290)
T PRK06701 126 DILVNNAA 133 (290)
T ss_pred CEEEECCc
Confidence 88777544
No 181
>PRK06139 short chain dehydrogenase; Provisional
Probab=98.56 E-value=3.6e-07 Score=78.79 Aligned_cols=78 Identities=15% Similarity=0.080 Sum_probs=59.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~ 73 (231)
+++++||||+|+||+++++.|.++|++|+++.|+... ..+..+.+ ...+.++.+|++|.+++.++++ .
T Consensus 7 ~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~--l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (330)
T PRK06139 7 GAVVVITGASSGIGQATAEAFARRGARLVLAARDEEA--LQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGR 84 (330)
T ss_pred CCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 5789999999999999999999999999999997532 11111222 2456678999999999888774 4
Q ss_pred CCEEEEcccC
Q 043777 74 VDVRFIPSEY 83 (231)
Q Consensus 74 ~d~~f~ps~~ 83 (231)
+|+.++....
T Consensus 85 iD~lVnnAG~ 94 (330)
T PRK06139 85 IDVWVNNVGV 94 (330)
T ss_pred CCEEEECCCc
Confidence 7887775543
No 182
>PRK07060 short chain dehydrogenase; Provisional
Probab=98.55 E-value=4.3e-07 Score=74.27 Aligned_cols=75 Identities=21% Similarity=0.160 Sum_probs=58.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc---CCEEEEc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ---VDVRFIP 80 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~---~d~~f~p 80 (231)
+++++||||+|+||+++++.|+++|++|++++|+... .+.+.. ..++.++.+|++|.+++.++++. +|++++.
T Consensus 9 ~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~---~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ 84 (245)
T PRK07060 9 GKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAA---LDRLAG-ETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNC 84 (245)
T ss_pred CCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHH-HhCCeEEEecCCCHHHHHHHHHHhCCCCEEEEC
Confidence 4689999999999999999999999999999987421 111111 13567889999999999888874 7888875
Q ss_pred cc
Q 043777 81 SE 82 (231)
Q Consensus 81 s~ 82 (231)
..
T Consensus 85 ag 86 (245)
T PRK07060 85 AG 86 (245)
T ss_pred CC
Confidence 43
No 183
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=98.55 E-value=3.9e-07 Score=74.42 Aligned_cols=77 Identities=19% Similarity=0.100 Sum_probs=58.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHcc-------C
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVKQ-------V 74 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~~-------~ 74 (231)
++++||||+|+||+++++.|.++|+.|+++.|+..... .+..... ...+.++.+|++|.+++.+++++ +
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i 81 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCA-KDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV 81 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHH-HHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 68999999999999999999999999999998753111 1111111 13578899999999998887754 6
Q ss_pred CEEEEccc
Q 043777 75 DVRFIPSE 82 (231)
Q Consensus 75 d~~f~ps~ 82 (231)
|++++.+.
T Consensus 82 d~vi~~ag 89 (245)
T PRK12824 82 DILVNNAG 89 (245)
T ss_pred CEEEECCC
Confidence 88777554
No 184
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.55 E-value=7e-07 Score=76.67 Aligned_cols=77 Identities=22% Similarity=0.250 Sum_probs=58.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcCCCCch-hhhh---hh------hhc-CCcEEEEEcCCC------HHH
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRDSASNF-NFSL---LR------VFH-SGVFDYWGLLED------EKS 66 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~~~~~-~~~~---~~------~~~-~~v~~~~~D~~d------~~~ 66 (231)
+++++||||||+|++++.+|+.+- .+|++++|..+... ++.+ .. +.. .+++++.+|+.. ...
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 479999999999999999999875 59999999876411 1111 11 122 678999999984 456
Q ss_pred HHHHHccCCEEEEcc
Q 043777 67 LLEAVKQVDVRFIPS 81 (231)
Q Consensus 67 l~~al~~~d~~f~ps 81 (231)
+.+..+.+|.+||+.
T Consensus 81 ~~~La~~vD~I~H~g 95 (382)
T COG3320 81 WQELAENVDLIIHNA 95 (382)
T ss_pred HHHHhhhcceEEecc
Confidence 788888899999874
No 185
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=98.55 E-value=3.4e-07 Score=75.67 Aligned_cols=79 Identities=15% Similarity=0.119 Sum_probs=57.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhh-hc-CCcEEEEEcCCCHHHHHHHHcc-------
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRV-FH-SGVFDYWGLLEDEKSLLEAVKQ------- 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~-~~-~~v~~~~~D~~d~~~l~~al~~------- 73 (231)
+++++||||+|+||++++++|.++|+.|++++|+..... ..+.+.. .. ..+.++.+|++|.+++.+++++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999999999999999999998753210 0111111 11 3477889999999988777653
Q ss_pred CCEEEEccc
Q 043777 74 VDVRFIPSE 82 (231)
Q Consensus 74 ~d~~f~ps~ 82 (231)
+|++++...
T Consensus 82 id~vv~~ag 90 (259)
T PRK12384 82 VDLLVYNAG 90 (259)
T ss_pred CCEEEECCC
Confidence 577776443
No 186
>PRK05855 short chain dehydrogenase; Validated
Probab=98.54 E-value=1.8e-06 Score=79.28 Aligned_cols=80 Identities=19% Similarity=0.069 Sum_probs=59.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VD 75 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d 75 (231)
.++++||||+|+||++++++|.++|++|++++|+..... ..+.+.....++.++.+|++|.+++.++++. +|
T Consensus 315 ~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 394 (582)
T PRK05855 315 GKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVPD 394 (582)
T ss_pred CCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCCc
Confidence 478999999999999999999999999999999753210 0111111124567889999999998887764 68
Q ss_pred EEEEcccC
Q 043777 76 VRFIPSEY 83 (231)
Q Consensus 76 ~~f~ps~~ 83 (231)
++++.+..
T Consensus 395 ~lv~~Ag~ 402 (582)
T PRK05855 395 IVVNNAGI 402 (582)
T ss_pred EEEECCcc
Confidence 87775543
No 187
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=98.54 E-value=1.8e-07 Score=76.56 Aligned_cols=76 Identities=12% Similarity=0.075 Sum_probs=54.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEE-cCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHcc-------
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALI-RDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVKQ------- 73 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~-R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~~------- 73 (231)
++++||||+|+||++++++|+++|++|.++. |+... ..+....+ ...+.++.+|++|++++.+++++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 79 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHA--AQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEP 79 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHH--HHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence 4799999999999999999999999987754 43211 11111111 23567889999999999888775
Q ss_pred CCEEEEccc
Q 043777 74 VDVRFIPSE 82 (231)
Q Consensus 74 ~d~~f~ps~ 82 (231)
+|++++...
T Consensus 80 id~vi~~ag 88 (247)
T PRK09730 80 LAALVNNAG 88 (247)
T ss_pred CCEEEECCC
Confidence 467766543
No 188
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=98.53 E-value=1.9e-06 Score=71.30 Aligned_cols=71 Identities=24% Similarity=0.223 Sum_probs=55.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC-chhhhhhhhhc----CCcEEEEEcCCCHHHHHHHHccC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS-NFNFSLLRVFH----SGVFDYWGLLEDEKSLLEAVKQV 74 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~-~~~~~~~~~~~----~~v~~~~~D~~d~~~l~~al~~~ 74 (231)
+|+.||||-||+-|+++++.|++.||.|+.+.|+.+. ++..-.+...+ ..+.++.+|++|...+.++++.+
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v 77 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV 77 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc
Confidence 4789999999999999999999999999999998654 22100111222 34778899999999999999874
No 189
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=98.53 E-value=1.6e-06 Score=69.58 Aligned_cols=25 Identities=28% Similarity=0.480 Sum_probs=23.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGH 29 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~ 29 (231)
++|+|||++|.+|++|.+.+..+|.
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~~q~~ 26 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQEQGF 26 (315)
T ss_pred ceEEEecCCchHHHHHHHHHHhcCC
Confidence 6899999999999999999999986
No 190
>PRK12747 short chain dehydrogenase; Provisional
Probab=98.53 E-value=5.5e-07 Score=74.20 Aligned_cols=82 Identities=16% Similarity=0.090 Sum_probs=56.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-----
Q 043777 1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK----- 72 (231)
Q Consensus 1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~----- 72 (231)
|.++++++||||+|+||++++++|.++|+.|.+..++.... ..+....+ ...+..+.+|+++.+++..+++
T Consensus 1 ~~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (252)
T PRK12747 1 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEE-AEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNE 79 (252)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHH-HHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHH
Confidence 55678999999999999999999999999988775432111 11111112 1345677899999877654332
Q ss_pred --------cCCEEEEcccC
Q 043777 73 --------QVDVRFIPSEY 83 (231)
Q Consensus 73 --------~~d~~f~ps~~ 83 (231)
.+|++++...+
T Consensus 80 ~~~~~g~~~id~lv~~Ag~ 98 (252)
T PRK12747 80 LQNRTGSTKFDILINNAGI 98 (252)
T ss_pred hhhhcCCCCCCEEEECCCc
Confidence 47877775544
No 191
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=98.53 E-value=3.1e-07 Score=75.62 Aligned_cols=76 Identities=17% Similarity=0.143 Sum_probs=57.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHcc-------C
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVKQ-------V 74 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~~-------~ 74 (231)
++++||||+|+||++++++|++.|+.|+++.|+... ..+..+.+ ...+.++.+|++|++++.++++. +
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i 78 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEET--AKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGF 78 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 479999999999999999999999999999887421 11111222 24567889999999998877653 5
Q ss_pred CEEEEccc
Q 043777 75 DVRFIPSE 82 (231)
Q Consensus 75 d~~f~ps~ 82 (231)
|++++.+.
T Consensus 79 d~vi~~ag 86 (254)
T TIGR02415 79 DVMVNNAG 86 (254)
T ss_pred CEEEECCC
Confidence 88777543
No 192
>PRK12742 oxidoreductase; Provisional
Probab=98.53 E-value=6.2e-07 Score=73.02 Aligned_cols=77 Identities=19% Similarity=0.223 Sum_probs=56.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc---CCEEEEc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ---VDVRFIP 80 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~---~d~~f~p 80 (231)
+++|+||||+|+||++++++|+++|++|.++.|+... ...+.... .++..+.+|++|.+++.++++. +|++++.
T Consensus 6 ~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~-~~~~l~~~--~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ 82 (237)
T PRK12742 6 GKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKD-AAERLAQE--TGATAVQTDSADRDAVIDVVRKSGALDILVVN 82 (237)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHH-HHHHHHHH--hCCeEEecCCCCHHHHHHHHHHhCCCcEEEEC
Confidence 4789999999999999999999999998877664321 11111111 3567788999999988887764 6887776
Q ss_pred ccC
Q 043777 81 SEY 83 (231)
Q Consensus 81 s~~ 83 (231)
...
T Consensus 83 ag~ 85 (237)
T PRK12742 83 AGI 85 (237)
T ss_pred CCC
Confidence 543
No 193
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=98.52 E-value=2.2e-07 Score=76.66 Aligned_cols=76 Identities=16% Similarity=0.143 Sum_probs=57.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHcc-------
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVKQ------- 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~~------- 73 (231)
+++++||||+|+||++++++|+++|+.|+++.|+... ..+....+ ..++.++.+|++|++++.+++++
T Consensus 11 ~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 88 (256)
T PRK06124 11 GQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAAT--LEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGR 88 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHH--HHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 5799999999999999999999999999999997521 11111222 24577889999999998887764
Q ss_pred CCEEEEcc
Q 043777 74 VDVRFIPS 81 (231)
Q Consensus 74 ~d~~f~ps 81 (231)
+|.+++..
T Consensus 89 id~vi~~a 96 (256)
T PRK06124 89 LDILVNNV 96 (256)
T ss_pred CCEEEECC
Confidence 46666644
No 194
>PRK06198 short chain dehydrogenase; Provisional
Probab=98.52 E-value=4.8e-07 Score=74.78 Aligned_cols=78 Identities=17% Similarity=0.096 Sum_probs=57.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCC-EEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------C
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHP-KFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------V 74 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~-v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~ 74 (231)
.++++||||+|+||+++++.|+++|+. |.++.|+..... ..+.+......+.++.+|+++++++.++++. +
T Consensus 6 ~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 85 (260)
T PRK06198 6 GKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGRL 85 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 578999999999999999999999998 888888643211 0111111123566789999999988877753 6
Q ss_pred CEEEEcc
Q 043777 75 DVRFIPS 81 (231)
Q Consensus 75 d~~f~ps 81 (231)
|.+++..
T Consensus 86 d~li~~a 92 (260)
T PRK06198 86 DALVNAA 92 (260)
T ss_pred CEEEECC
Confidence 8877654
No 195
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=98.52 E-value=2e-07 Score=77.29 Aligned_cols=76 Identities=22% Similarity=0.266 Sum_probs=57.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHc-------cCC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVK-------QVD 75 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~-------~~d 75 (231)
|+++||||+|+||+.++++|+++|+.|.++.|+... ..+..+.+. ..+.++.+|++|.+++.++++ .+|
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id 78 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEEN--LEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGID 78 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence 579999999999999999999999999999987532 111112222 357788999999999887775 368
Q ss_pred EEEEccc
Q 043777 76 VRFIPSE 82 (231)
Q Consensus 76 ~~f~ps~ 82 (231)
++++...
T Consensus 79 ~li~naG 85 (259)
T PRK08340 79 ALVWNAG 85 (259)
T ss_pred EEEECCC
Confidence 7776543
No 196
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=98.52 E-value=6.3e-07 Score=73.64 Aligned_cols=71 Identities=17% Similarity=0.145 Sum_probs=57.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VDV 76 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d~ 76 (231)
.++++||||+|+||+.++++|+++|++|+++.|+.. ......+..+++|++|.+++.+++++ +|+
T Consensus 8 ~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 79 (252)
T PRK08220 8 GKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFL--------TQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDV 79 (252)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchh--------hhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 468999999999999999999999999999998641 11124577889999999999888765 688
Q ss_pred EEEccc
Q 043777 77 RFIPSE 82 (231)
Q Consensus 77 ~f~ps~ 82 (231)
+++...
T Consensus 80 vi~~ag 85 (252)
T PRK08220 80 LVNAAG 85 (252)
T ss_pred EEECCC
Confidence 777543
No 197
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=98.52 E-value=2.9e-07 Score=76.36 Aligned_cols=77 Identities=12% Similarity=0.037 Sum_probs=56.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh----cCCcEEEEEcCCCHHHHHHHHcc------
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF----HSGVFDYWGLLEDEKSLLEAVKQ------ 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~----~~~v~~~~~D~~d~~~l~~al~~------ 73 (231)
+++++||||+++||++++++|++.|+.|+++.|+..... ......+ ...+.++.+|++|++++.++++.
T Consensus 8 ~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 86 (260)
T PRK08416 8 GKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEA-NKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD 86 (260)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHH-HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 579999999999999999999999999988776532111 1111111 13567889999999988777764
Q ss_pred -CCEEEEcc
Q 043777 74 -VDVRFIPS 81 (231)
Q Consensus 74 -~d~~f~ps 81 (231)
+|++++..
T Consensus 87 ~id~lv~nA 95 (260)
T PRK08416 87 RVDFFISNA 95 (260)
T ss_pred CccEEEECc
Confidence 57766644
No 198
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=98.51 E-value=3e-07 Score=76.06 Aligned_cols=73 Identities=23% Similarity=0.190 Sum_probs=47.5
Q ss_pred EEcCCChhHHHHHHHHHhCCC--CEEEEEcCCCCc-hhhhhhh---------h----hcCCcEEEEEcCCCH------HH
Q 043777 9 VIGAIGRIGYHFTRRSIEYGH--PKFALIRDSASN-FNFSLLR---------V----FHSGVFDYWGLLEDE------KS 66 (231)
Q Consensus 9 VtGatG~iG~~i~~~L~~~g~--~v~~~~R~~~~~-~~~~~~~---------~----~~~~v~~~~~D~~d~------~~ 66 (231)
|||||||+|++++++|++++. .|+++.|..+.. ......+ . ...+++++.||++++ +.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999986 899999986431 1111100 1 137899999999985 45
Q ss_pred HHHHHccCCEEEEcc
Q 043777 67 LLEAVKQVDVRFIPS 81 (231)
Q Consensus 67 l~~al~~~d~~f~ps 81 (231)
+..+.+++|++||..
T Consensus 81 ~~~L~~~v~~IiH~A 95 (249)
T PF07993_consen 81 YQELAEEVDVIIHCA 95 (249)
T ss_dssp HHHHHHH--EEEE--
T ss_pred hhccccccceeeecc
Confidence 677778899999854
No 199
>PRK07677 short chain dehydrogenase; Provisional
Probab=98.50 E-value=3.1e-07 Score=75.71 Aligned_cols=78 Identities=15% Similarity=0.133 Sum_probs=57.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VD 75 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d 75 (231)
+++++||||+|+||+++++.|+++|+.|+++.|+..... ..+.+......+.++.+|++|++++.++++. +|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 368999999999999999999999999999998753211 1111111124577889999999988876653 57
Q ss_pred EEEEcc
Q 043777 76 VRFIPS 81 (231)
Q Consensus 76 ~~f~ps 81 (231)
.+++..
T Consensus 81 ~lI~~a 86 (252)
T PRK07677 81 ALINNA 86 (252)
T ss_pred EEEECC
Confidence 766543
No 200
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=98.50 E-value=5.2e-07 Score=76.71 Aligned_cols=74 Identities=27% Similarity=0.251 Sum_probs=55.4
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHc--cCCEEEEcc
Q 043777 6 NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVK--QVDVRFIPS 81 (231)
Q Consensus 6 ~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~--~~d~~f~ps 81 (231)
+|+||||||+||++++++|+++|++|+++.|...... ....... .++..+.+|+++.+++.++++ ++|++++..
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~a 78 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSP--EALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFA 78 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccch--hhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECc
Confidence 5899999999999999999999999988766432111 1111111 256788999999999999987 478877644
No 201
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=98.50 E-value=5.5e-07 Score=74.80 Aligned_cols=71 Identities=11% Similarity=0.081 Sum_probs=56.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VDV 76 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d~ 76 (231)
+++++||||+|+||+++++.|+++|+.|.++.|+.... . ...+..+.+|++|++++.++++. +|.
T Consensus 9 ~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~------~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 80 (266)
T PRK06171 9 GKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDG------Q--HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDG 80 (266)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccc------c--cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 57899999999999999999999999999998875310 0 14567889999999998877664 577
Q ss_pred EEEccc
Q 043777 77 RFIPSE 82 (231)
Q Consensus 77 ~f~ps~ 82 (231)
+++...
T Consensus 81 li~~Ag 86 (266)
T PRK06171 81 LVNNAG 86 (266)
T ss_pred EEECCc
Confidence 776443
No 202
>PRK07062 short chain dehydrogenase; Provisional
Probab=98.50 E-value=3.1e-07 Score=76.24 Aligned_cols=79 Identities=18% Similarity=0.092 Sum_probs=57.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhc-CCcEEEEEcCCCHHHHHHHHcc-------
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQ------- 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~------- 73 (231)
.++++||||+|+||++++++|+++|+.|++++|+..... ..+...... ..+..+.+|++|.+++.++++.
T Consensus 8 ~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 87 (265)
T PRK07062 8 GRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFGG 87 (265)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 478999999999999999999999999999999753211 111111111 2466789999999988776653
Q ss_pred CCEEEEccc
Q 043777 74 VDVRFIPSE 82 (231)
Q Consensus 74 ~d~~f~ps~ 82 (231)
+|.+++...
T Consensus 88 id~li~~Ag 96 (265)
T PRK07062 88 VDMLVNNAG 96 (265)
T ss_pred CCEEEECCC
Confidence 577776544
No 203
>PLN02996 fatty acyl-CoA reductase
Probab=98.49 E-value=5.3e-07 Score=81.76 Aligned_cols=79 Identities=19% Similarity=0.237 Sum_probs=57.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC---CEEEEEcCCCC-chhh----hh-----hh-----------hhc-CCcEEEE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGH---PKFALIRDSAS-NFNF----SL-----LR-----------VFH-SGVFDYW 58 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~---~v~~~~R~~~~-~~~~----~~-----~~-----------~~~-~~v~~~~ 58 (231)
+++|+|||||||+|+++++.|++.+. .|+++.|.... .+.. +. .+ .+. .++.++.
T Consensus 11 ~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~ 90 (491)
T PLN02996 11 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVP 90 (491)
T ss_pred CCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEe
Confidence 68999999999999999999998653 57899997643 1110 10 00 001 4678899
Q ss_pred EcCC-------CHHHHHHHHccCCEEEEccc
Q 043777 59 GLLE-------DEKSLLEAVKQVDVRFIPSE 82 (231)
Q Consensus 59 ~D~~-------d~~~l~~al~~~d~~f~ps~ 82 (231)
+|++ +.+.+.++++++|++||.+.
T Consensus 91 GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA 121 (491)
T PLN02996 91 GDISYDDLGVKDSNLREEMWKEIDIVVNLAA 121 (491)
T ss_pred cccCCcCCCCChHHHHHHHHhCCCEEEECcc
Confidence 9998 45567788899999998654
No 204
>PRK06953 short chain dehydrogenase; Provisional
Probab=98.49 E-value=4.6e-07 Score=73.34 Aligned_cols=71 Identities=24% Similarity=0.254 Sum_probs=55.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHc-----cCCEEE
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVK-----QVDVRF 78 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~-----~~d~~f 78 (231)
++++||||+|+||++++++|+++|++|.+++|+... . +.+. .++.++.+|++|.+++.++++ .+|.++
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~---~---~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi 75 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAA---L---AALQALGAEALALDVADPASVAGLAWKLDGEALDAAV 75 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHH---H---HHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEE
Confidence 589999999999999999999999999999987431 1 1222 456788999999999888643 267777
Q ss_pred Ecc
Q 043777 79 IPS 81 (231)
Q Consensus 79 ~ps 81 (231)
+..
T Consensus 76 ~~a 78 (222)
T PRK06953 76 YVA 78 (222)
T ss_pred ECC
Confidence 644
No 205
>PRK07035 short chain dehydrogenase; Provisional
Probab=98.49 E-value=3.5e-07 Score=75.33 Aligned_cols=77 Identities=12% Similarity=0.045 Sum_probs=57.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHcc-------
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVKQ------- 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~~------- 73 (231)
+++++||||+|+||.+++++|+++|++|++++|+... ..+..+.+ ...+..+.+|+.|.+++.++++.
T Consensus 8 ~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 85 (252)
T PRK07035 8 GKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDG--CQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGR 85 (252)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999999999999999999999999986421 11122222 13466789999999988776653
Q ss_pred CCEEEEccc
Q 043777 74 VDVRFIPSE 82 (231)
Q Consensus 74 ~d~~f~ps~ 82 (231)
+|++++...
T Consensus 86 id~li~~ag 94 (252)
T PRK07035 86 LDILVNNAA 94 (252)
T ss_pred CCEEEECCC
Confidence 677666443
No 206
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=98.47 E-value=1.1e-06 Score=72.74 Aligned_cols=78 Identities=12% Similarity=0.078 Sum_probs=57.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHcc-------
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVKQ------- 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~~------- 73 (231)
.++++||||+|+||+++++.|+++|+.|++..|+..... ......+ ...+.++.+|++|.+++.++++.
T Consensus 7 ~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~-~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~ 85 (261)
T PRK08936 7 GKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEA-NDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGT 85 (261)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHH-HHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 579999999999999999999999999988888542211 1111122 23466789999999988777653
Q ss_pred CCEEEEccc
Q 043777 74 VDVRFIPSE 82 (231)
Q Consensus 74 ~d~~f~ps~ 82 (231)
+|++++...
T Consensus 86 id~lv~~ag 94 (261)
T PRK08936 86 LDVMINNAG 94 (261)
T ss_pred CCEEEECCC
Confidence 687776544
No 207
>PRK07985 oxidoreductase; Provisional
Probab=98.47 E-value=5.5e-07 Score=76.28 Aligned_cols=79 Identities=16% Similarity=0.050 Sum_probs=56.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhh---hhhhcCCcEEEEEcCCCHHHHHHHHcc-------
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSL---LRVFHSGVFDYWGLLEDEKSLLEAVKQ------- 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~---~~~~~~~v~~~~~D~~d~~~l~~al~~------- 73 (231)
.++++||||+|+||++++++|+++|++|++..|+.......+. ++.....+.++.+|++|.+++.++++.
T Consensus 49 ~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 128 (294)
T PRK07985 49 DRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALGG 128 (294)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4789999999999999999999999999887765422111111 111123466789999999988776653
Q ss_pred CCEEEEccc
Q 043777 74 VDVRFIPSE 82 (231)
Q Consensus 74 ~d~~f~ps~ 82 (231)
+|+.++...
T Consensus 129 id~lv~~Ag 137 (294)
T PRK07985 129 LDIMALVAG 137 (294)
T ss_pred CCEEEECCC
Confidence 577776543
No 208
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.47 E-value=4.2e-07 Score=74.04 Aligned_cols=75 Identities=13% Similarity=0.200 Sum_probs=56.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHcc-------C
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQ-------V 74 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~-------~ 74 (231)
+++|+||||+|+||+++++.|+++|++|++++|+... ......... .++.++.+|+++.+++.+++++ +
T Consensus 5 ~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 82 (238)
T PRK05786 5 GKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENK--LKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI 82 (238)
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 5799999999999999999999999999999997531 111112222 3577889999999998877654 4
Q ss_pred CEEEEc
Q 043777 75 DVRFIP 80 (231)
Q Consensus 75 d~~f~p 80 (231)
|.+++.
T Consensus 83 d~ii~~ 88 (238)
T PRK05786 83 DGLVVT 88 (238)
T ss_pred CEEEEc
Confidence 666654
No 209
>PLN02503 fatty acyl-CoA reductase 2
Probab=98.47 E-value=7.1e-07 Score=82.37 Aligned_cols=79 Identities=20% Similarity=0.196 Sum_probs=56.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC---CEEEEEcCCCCc-hhhhhhhh--------------------h-cCCcEEEE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGH---PKFALIRDSASN-FNFSLLRV--------------------F-HSGVFDYW 58 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~---~v~~~~R~~~~~-~~~~~~~~--------------------~-~~~v~~~~ 58 (231)
.++|+|||||||+|++|++.|++.+. .|+++.|..... +.....+. + ..++.++.
T Consensus 119 ~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~ 198 (605)
T PLN02503 119 GKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVV 198 (605)
T ss_pred CCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEE
Confidence 68999999999999999999998764 578999975431 11111000 0 13577899
Q ss_pred EcCCCH------HHHHHHHccCCEEEEccc
Q 043777 59 GLLEDE------KSLLEAVKQVDVRFIPSE 82 (231)
Q Consensus 59 ~D~~d~------~~l~~al~~~d~~f~ps~ 82 (231)
+|++++ +....+.+++|++||.+.
T Consensus 199 GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA 228 (605)
T PLN02503 199 GNVCESNLGLEPDLADEIAKEVDVIINSAA 228 (605)
T ss_pred eeCCCcccCCCHHHHHHHHhcCCEEEECcc
Confidence 999987 456666678999998654
No 210
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.47 E-value=5.3e-07 Score=74.58 Aligned_cols=75 Identities=11% Similarity=0.063 Sum_probs=56.3
Q ss_pred CCeEEEEcCC--ChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHcc-------
Q 043777 4 KSNVLVIGAI--GRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQ------- 73 (231)
Q Consensus 4 ~~~ilVtGat--G~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~------- 73 (231)
+++++||||+ ++||+.++++|+++|++|++..|+.. ..+.++++. ..+..+++|++|++++.++++.
T Consensus 7 ~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~---~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 83 (252)
T PRK06079 7 GKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDR---MKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGK 83 (252)
T ss_pred CCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchH---HHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 5789999999 79999999999999999999888631 111222332 4567889999999988776543
Q ss_pred CCEEEEcc
Q 043777 74 VDVRFIPS 81 (231)
Q Consensus 74 ~d~~f~ps 81 (231)
+|+.+...
T Consensus 84 iD~lv~nA 91 (252)
T PRK06079 84 IDGIVHAI 91 (252)
T ss_pred CCEEEEcc
Confidence 67766544
No 211
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=98.46 E-value=6.6e-07 Score=72.96 Aligned_cols=77 Identities=21% Similarity=0.082 Sum_probs=56.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHcc-------C
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVKQ-------V 74 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~~-------~ 74 (231)
++++||||+|+||+++++.|+++|+.|+++.|+... ...+..... ..++.++.+|++|++++.+++++ +
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEE-RAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPI 79 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHH-HHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 479999999999999999999999999998884211 111111111 14577899999999988776653 6
Q ss_pred CEEEEccc
Q 043777 75 DVRFIPSE 82 (231)
Q Consensus 75 d~~f~ps~ 82 (231)
|.+++...
T Consensus 80 d~vi~~ag 87 (242)
T TIGR01829 80 DVLVNNAG 87 (242)
T ss_pred cEEEECCC
Confidence 88877554
No 212
>PRK07832 short chain dehydrogenase; Provisional
Probab=98.46 E-value=7.3e-07 Score=74.44 Aligned_cols=76 Identities=17% Similarity=0.040 Sum_probs=55.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---c-CCcEEEEEcCCCHHHHHHHHcc-------
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---H-SGVFDYWGLLEDEKSLLEAVKQ------- 73 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~-~~v~~~~~D~~d~~~l~~al~~------- 73 (231)
|+++||||+|+||+++++.|+++|+.|+++.|+... ..+..+.+ . ..+.++.+|++|++++.++++.
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADG--LAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGS 78 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 479999999999999999999999999998886421 11111122 1 2234578999999988766654
Q ss_pred CCEEEEccc
Q 043777 74 VDVRFIPSE 82 (231)
Q Consensus 74 ~d~~f~ps~ 82 (231)
+|.+++.+.
T Consensus 79 id~lv~~ag 87 (272)
T PRK07832 79 MDVVMNIAG 87 (272)
T ss_pred CCEEEECCC
Confidence 688887654
No 213
>PRK08309 short chain dehydrogenase; Provisional
Probab=98.45 E-value=3.7e-07 Score=71.77 Aligned_cols=67 Identities=19% Similarity=0.125 Sum_probs=50.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHccC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQV 74 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~~ 74 (231)
|+++||||||++|. +++.|.++|++|.+++|+... .......+. ..+..+.+|++|.+++.++++++
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~--~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~ 69 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVK--LENVKRESTTPESITPLPLDYHDDDALKLAIKST 69 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHH--HHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence 57999999988775 999999999999999987421 111111122 45677889999999998888754
No 214
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=98.44 E-value=7.1e-07 Score=72.55 Aligned_cols=75 Identities=16% Similarity=0.166 Sum_probs=55.8
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777 7 VLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ-------VDV 76 (231)
Q Consensus 7 ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~-------~d~ 76 (231)
++|||++|+||+++++.|+++|++|+++.|+..... ....+.+. ..+.++.+|++|.+++.+++++ +|.
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 79 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGA-EEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDI 79 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHH-HHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 589999999999999999999999999988752211 11111222 3467889999999998887765 588
Q ss_pred EEEccc
Q 043777 77 RFIPSE 82 (231)
Q Consensus 77 ~f~ps~ 82 (231)
+++.+.
T Consensus 80 vi~~ag 85 (239)
T TIGR01830 80 LVNNAG 85 (239)
T ss_pred EEECCC
Confidence 777544
No 215
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.44 E-value=8.7e-07 Score=72.66 Aligned_cols=79 Identities=10% Similarity=0.066 Sum_probs=57.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VD 75 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d 75 (231)
.++++||||+|+||+.+++.|+++|+.|+++.|+..... ..+........+..+.+|++|.+++.++++. +|
T Consensus 5 ~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 84 (253)
T PRK08217 5 DKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQLN 84 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 578999999999999999999999999999988752211 0111111123567789999999888766654 58
Q ss_pred EEEEccc
Q 043777 76 VRFIPSE 82 (231)
Q Consensus 76 ~~f~ps~ 82 (231)
.+++.+.
T Consensus 85 ~vi~~ag 91 (253)
T PRK08217 85 GLINNAG 91 (253)
T ss_pred EEEECCC
Confidence 8777543
No 216
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.43 E-value=1.2e-06 Score=74.70 Aligned_cols=78 Identities=15% Similarity=0.055 Sum_probs=57.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc------cC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK------QV 74 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~------~~ 74 (231)
+++++||||+|+||++++++|+++|+.|++..|...... .+..+.+ ...+.++.+|++|.+++.++++ .+
T Consensus 12 ~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~-~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~i 90 (306)
T PRK07792 12 GKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDA-SDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGL 90 (306)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHH-HHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence 579999999999999999999999999998887532111 1111222 2356778999999998887765 37
Q ss_pred CEEEEccc
Q 043777 75 DVRFIPSE 82 (231)
Q Consensus 75 d~~f~ps~ 82 (231)
|++++...
T Consensus 91 D~li~nAG 98 (306)
T PRK07792 91 DIVVNNAG 98 (306)
T ss_pred CEEEECCC
Confidence 88777543
No 217
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=98.43 E-value=1.1e-06 Score=72.53 Aligned_cols=78 Identities=9% Similarity=0.052 Sum_probs=57.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VDV 76 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d~ 76 (231)
+++++||||+|+||++++++|.+.|++|+++.|.... ...+.+......+..+++|++|.+++.++++. +|+
T Consensus 10 ~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~ 88 (253)
T PRK08993 10 GKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPT-ETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDI 88 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchH-HHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 5789999999999999999999999999887765321 11111222224567789999999998887763 688
Q ss_pred EEEccc
Q 043777 77 RFIPSE 82 (231)
Q Consensus 77 ~f~ps~ 82 (231)
+++.+.
T Consensus 89 li~~Ag 94 (253)
T PRK08993 89 LVNNAG 94 (253)
T ss_pred EEECCC
Confidence 776544
No 218
>PRK09242 tropinone reductase; Provisional
Probab=98.42 E-value=9e-07 Score=73.11 Aligned_cols=78 Identities=14% Similarity=0.133 Sum_probs=58.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh----c-CCcEEEEEcCCCHHHHHHHHcc-----
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF----H-SGVFDYWGLLEDEKSLLEAVKQ----- 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~----~-~~v~~~~~D~~d~~~l~~al~~----- 73 (231)
.++++||||+|+||+++++.|.++|++|++++|+... ..+....+ . ..+..+.+|+++.+++.++++.
T Consensus 9 ~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (257)
T PRK09242 9 GQTALITGASKGIGLAIAREFLGLGADVLIVARDADA--LAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHW 86 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 5789999999999999999999999999999997532 11111111 1 3566789999999887766653
Q ss_pred --CCEEEEcccC
Q 043777 74 --VDVRFIPSEY 83 (231)
Q Consensus 74 --~d~~f~ps~~ 83 (231)
+|.+++.+..
T Consensus 87 g~id~li~~ag~ 98 (257)
T PRK09242 87 DGLHILVNNAGG 98 (257)
T ss_pred CCCCEEEECCCC
Confidence 6887776543
No 219
>PRK07201 short chain dehydrogenase; Provisional
Probab=98.40 E-value=1.2e-06 Score=81.99 Aligned_cols=78 Identities=23% Similarity=0.206 Sum_probs=60.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~ 73 (231)
+++++||||+|+||+++++.|+++|++|++++|+... ..+..+.+ ...+.++.+|++|.+++.++++ .
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 448 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEA--LDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGH 448 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 5789999999999999999999999999999997532 11111122 2457788999999999988876 4
Q ss_pred CCEEEEcccC
Q 043777 74 VDVRFIPSEY 83 (231)
Q Consensus 74 ~d~~f~ps~~ 83 (231)
+|++++....
T Consensus 449 id~li~~Ag~ 458 (657)
T PRK07201 449 VDYLVNNAGR 458 (657)
T ss_pred CCEEEECCCC
Confidence 7888876544
No 220
>PRK06125 short chain dehydrogenase; Provisional
Probab=98.40 E-value=1.4e-06 Score=72.06 Aligned_cols=76 Identities=17% Similarity=0.062 Sum_probs=57.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh----cCCcEEEEEcCCCHHHHHHHHcc---CCE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF----HSGVFDYWGLLEDEKSLLEAVKQ---VDV 76 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~----~~~v~~~~~D~~d~~~l~~al~~---~d~ 76 (231)
.++++||||+|+||+++++.|+++|++|.+++|+... ..+..+.+ ..++.++.+|++|++++.++++. +|.
T Consensus 7 ~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~ 84 (259)
T PRK06125 7 GKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADA--LEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDI 84 (259)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCE
Confidence 5789999999999999999999999999999987532 11111112 13567889999999998887764 687
Q ss_pred EEEcc
Q 043777 77 RFIPS 81 (231)
Q Consensus 77 ~f~ps 81 (231)
+++..
T Consensus 85 lv~~a 89 (259)
T PRK06125 85 LVNNA 89 (259)
T ss_pred EEECC
Confidence 77643
No 221
>PRK07831 short chain dehydrogenase; Provisional
Probab=98.39 E-value=1.8e-06 Score=71.60 Aligned_cols=79 Identities=20% Similarity=0.093 Sum_probs=57.5
Q ss_pred CCeEEEEcCCC-hhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhh-hc-CCcEEEEEcCCCHHHHHHHHc-------
Q 043777 4 KSNVLVIGAIG-RIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRV-FH-SGVFDYWGLLEDEKSLLEAVK------- 72 (231)
Q Consensus 4 ~~~ilVtGatG-~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~-~~-~~v~~~~~D~~d~~~l~~al~------- 72 (231)
+++++||||+| .||+++++.|+++|+.|++..|+..... ..+.++. +. ..+.++.+|+++.+++.++++
T Consensus 17 ~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 96 (262)
T PRK07831 17 GKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERLG 96 (262)
T ss_pred CCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 57899999997 7999999999999999998888643210 0111111 22 357788999999998887775
Q ss_pred cCCEEEEccc
Q 043777 73 QVDVRFIPSE 82 (231)
Q Consensus 73 ~~d~~f~ps~ 82 (231)
.+|++++...
T Consensus 97 ~id~li~~ag 106 (262)
T PRK07831 97 RLDVLVNNAG 106 (262)
T ss_pred CCCEEEECCC
Confidence 3688777554
No 222
>PLN02778 3,5-epimerase/4-reductase
Probab=98.38 E-value=1.1e-06 Score=74.57 Aligned_cols=57 Identities=21% Similarity=0.158 Sum_probs=42.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc--cCCEEEEcc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK--QVDVRFIPS 81 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~--~~d~~f~ps 81 (231)
.|+||||||+||||++++++|+++|++|+...+ |+.|.+.+...++ ++|+++|.+
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~-----------------------~~~~~~~v~~~l~~~~~D~ViH~A 65 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSG-----------------------RLENRASLEADIDAVKPTHVFNAA 65 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCEEEEecC-----------------------ccCCHHHHHHHHHhcCCCEEEECC
Confidence 589999999999999999999999998864322 2334444555554 578888765
Q ss_pred cC
Q 043777 82 EY 83 (231)
Q Consensus 82 ~~ 83 (231)
..
T Consensus 66 a~ 67 (298)
T PLN02778 66 GV 67 (298)
T ss_pred cc
Confidence 43
No 223
>PRK07791 short chain dehydrogenase; Provisional
Probab=98.38 E-value=9.8e-07 Score=74.43 Aligned_cols=79 Identities=15% Similarity=0.018 Sum_probs=56.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC-------chhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS-------NFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~-------~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~ 73 (231)
+++++||||+++||++++++|+++|+.|.++.|+... ....+..+.+. ..+.++.+|++|.+++.++++.
T Consensus 6 ~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~ 85 (286)
T PRK07791 6 GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVDA 85 (286)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHH
Confidence 5789999999999999999999999999988876410 11111122222 3466788999999988776643
Q ss_pred -------CCEEEEccc
Q 043777 74 -------VDVRFIPSE 82 (231)
Q Consensus 74 -------~d~~f~ps~ 82 (231)
+|+.++...
T Consensus 86 ~~~~~g~id~lv~nAG 101 (286)
T PRK07791 86 AVETFGGLDVLVNNAG 101 (286)
T ss_pred HHHhcCCCCEEEECCC
Confidence 677776544
No 224
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=98.38 E-value=1.2e-06 Score=71.99 Aligned_cols=80 Identities=14% Similarity=-0.022 Sum_probs=55.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhc-CCcEEEEEcCC--CHHHHHHHHc------
Q 043777 3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFH-SGVFDYWGLLE--DEKSLLEAVK------ 72 (231)
Q Consensus 3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~-~~v~~~~~D~~--d~~~l~~al~------ 72 (231)
+.++++||||+|+||.++++.|++.|++|++++|+..... ..+.+.... ..+.++.+|++ +.+++.++++
T Consensus 11 ~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 90 (247)
T PRK08945 11 KDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQF 90 (247)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999999999753211 011111222 35667788886 5555544332
Q ss_pred -cCCEEEEccc
Q 043777 73 -QVDVRFIPSE 82 (231)
Q Consensus 73 -~~d~~f~ps~ 82 (231)
.+|.+++.+.
T Consensus 91 ~~id~vi~~Ag 101 (247)
T PRK08945 91 GRLDGVLHNAG 101 (247)
T ss_pred CCCCEEEECCc
Confidence 4788887543
No 225
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=98.37 E-value=5.8e-07 Score=76.37 Aligned_cols=32 Identities=19% Similarity=0.382 Sum_probs=29.1
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 7 VLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 7 ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
|+|||||||||++|+++|++.|++++++.|+.
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~ 33 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNL 33 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCC
Confidence 79999999999999999999999888777764
No 226
>PRK08303 short chain dehydrogenase; Provisional
Probab=98.37 E-value=1.6e-06 Score=73.99 Aligned_cols=78 Identities=13% Similarity=-0.014 Sum_probs=56.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC--------chh---hhhhhhhcCCcEEEEEcCCCHHHHHHHHc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS--------NFN---FSLLRVFHSGVFDYWGLLEDEKSLLEAVK 72 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~--------~~~---~~~~~~~~~~v~~~~~D~~d~~~l~~al~ 72 (231)
+++++||||+++||++++++|++.|+.|.++.|+... ... .+.+......+.++++|++|++++.++++
T Consensus 8 ~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~ 87 (305)
T PRK08303 8 GKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALVE 87 (305)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence 5789999999999999999999999999999997421 001 11111111345678999999998877665
Q ss_pred c-------CCEEEEcc
Q 043777 73 Q-------VDVRFIPS 81 (231)
Q Consensus 73 ~-------~d~~f~ps 81 (231)
. +|+.+...
T Consensus 88 ~~~~~~g~iDilVnnA 103 (305)
T PRK08303 88 RIDREQGRLDILVNDI 103 (305)
T ss_pred HHHHHcCCccEEEECC
Confidence 3 57666544
No 227
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.36 E-value=1.6e-06 Score=70.61 Aligned_cols=71 Identities=20% Similarity=0.242 Sum_probs=55.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCH-HHHHHHHccCCEEEEccc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDE-KSLLEAVKQVDVRFIPSE 82 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~-~~l~~al~~~d~~f~ps~ 82 (231)
.++++||||+|+||++++++|+++|++|+++.|+... ....++..+.+|++++ +.+.+.+..+|++++...
T Consensus 5 ~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~--------~~~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag 76 (235)
T PRK06550 5 TKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKP--------DLSGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAG 76 (235)
T ss_pred CCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccc--------ccCCcEEEEECChHHHHHHHHHhhCCCCEEEECCC
Confidence 4789999999999999999999999999999887531 1124577889999987 444455556898877543
No 228
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=98.36 E-value=9.3e-07 Score=72.12 Aligned_cols=73 Identities=16% Similarity=0.039 Sum_probs=53.7
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777 7 VLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVKQ-------VDV 76 (231)
Q Consensus 7 ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~~-------~d~ 76 (231)
|+||||+|+||.++++.|.++|++|.++.|...... .+....+ ..++.++.+|++|.+++.++++. +|.
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~ 79 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDA-ESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYG 79 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHH-HHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 589999999999999999999999998887643211 1112222 24577899999999998877654 466
Q ss_pred EEEc
Q 043777 77 RFIP 80 (231)
Q Consensus 77 ~f~p 80 (231)
.++.
T Consensus 80 li~~ 83 (239)
T TIGR01831 80 VVLN 83 (239)
T ss_pred EEEC
Confidence 6553
No 229
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=98.36 E-value=2.5e-06 Score=69.44 Aligned_cols=70 Identities=21% Similarity=0.182 Sum_probs=51.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC--CCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHc---cCCEEE
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYG--HPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVK---QVDVRF 78 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g--~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~---~~d~~f 78 (231)
|+++||||+|+||++++++|+++| ..+....|+... ... ..+.++++|++|.+++.++.+ ++|+++
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~--------~~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li 72 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP--------DFQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLI 72 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc--------ccccCceEEEEecCCCHHHHHHHHHhcCCCCEEE
Confidence 589999999999999999999986 445444554321 122 567789999999998776544 578877
Q ss_pred Eccc
Q 043777 79 IPSE 82 (231)
Q Consensus 79 ~ps~ 82 (231)
+.+.
T Consensus 73 ~~aG 76 (235)
T PRK09009 73 NCVG 76 (235)
T ss_pred ECCc
Confidence 6443
No 230
>PRK05872 short chain dehydrogenase; Provisional
Probab=98.35 E-value=1e-06 Score=74.65 Aligned_cols=77 Identities=21% Similarity=0.174 Sum_probs=56.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHcc-------C
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQ-------V 74 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~-------~ 74 (231)
+++++||||+|+||+++++.|.++|++|.+++|+... ..+..+.+. ..+..+.+|++|.+++.++++. +
T Consensus 9 gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 86 (296)
T PRK05872 9 GKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAE--LAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGI 86 (296)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999999999999999987421 111122222 2344566999999988777653 6
Q ss_pred CEEEEccc
Q 043777 75 DVRFIPSE 82 (231)
Q Consensus 75 d~~f~ps~ 82 (231)
|++++...
T Consensus 87 d~vI~nAG 94 (296)
T PRK05872 87 DVVVANAG 94 (296)
T ss_pred CEEEECCC
Confidence 87776543
No 231
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.35 E-value=1.5e-06 Score=72.13 Aligned_cols=78 Identities=8% Similarity=-0.017 Sum_probs=56.1
Q ss_pred CCeEEEEcCC--ChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhc-CCcEEEEEcCCCHHHHHHHHcc------
Q 043777 4 KSNVLVIGAI--GRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQ------ 73 (231)
Q Consensus 4 ~~~ilVtGat--G~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~------ 73 (231)
.++++||||+ ++||++++++|+++|++|++..|+..... ..+..+... .++..+.+|++|++++.++++.
T Consensus 7 ~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 86 (257)
T PRK08594 7 GKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEVG 86 (257)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCC
Confidence 5789999997 89999999999999999998887532111 112222222 4567889999999998777653
Q ss_pred -CCEEEEcc
Q 043777 74 -VDVRFIPS 81 (231)
Q Consensus 74 -~d~~f~ps 81 (231)
+|..++..
T Consensus 87 ~ld~lv~na 95 (257)
T PRK08594 87 VIHGVAHCI 95 (257)
T ss_pred CccEEEECc
Confidence 57666543
No 232
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.35 E-value=3.6e-06 Score=70.42 Aligned_cols=81 Identities=21% Similarity=0.110 Sum_probs=59.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-h-hhhhhhhcC-CcEEEEEcCCCHHHHHHHHc-------c
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-N-FSLLRVFHS-GVFDYWGLLEDEKSLLEAVK-------Q 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~-~~~~~~~~~-~v~~~~~D~~d~~~l~~al~-------~ 73 (231)
+|.|+|||||.+||.+++.+|.++|..+..+.|....-. . .++.+.+.. .+.++++|++|.+++.++++ +
T Consensus 12 ~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg~ 91 (282)
T KOG1205|consen 12 GKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFGR 91 (282)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcCC
Confidence 689999999999999999999999998887777653211 1 222223333 48889999999999987663 4
Q ss_pred CCEEEEcccCC
Q 043777 74 VDVRFIPSEYG 84 (231)
Q Consensus 74 ~d~~f~ps~~g 84 (231)
+|+......++
T Consensus 92 vDvLVNNAG~~ 102 (282)
T KOG1205|consen 92 VDVLVNNAGIS 102 (282)
T ss_pred CCEEEecCccc
Confidence 77766554444
No 233
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=98.34 E-value=6.3e-06 Score=68.89 Aligned_cols=33 Identities=24% Similarity=0.286 Sum_probs=29.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
|+|||||++|++|..|++.|. .+++|+.++|..
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~ 33 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEFEVIATDRAE 33 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCceEEeccCcc
Confidence 459999999999999999998 678999998865
No 234
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.33 E-value=1.8e-06 Score=71.65 Aligned_cols=79 Identities=15% Similarity=0.072 Sum_probs=56.9
Q ss_pred CCeEEEEcC--CChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------C
Q 043777 4 KSNVLVIGA--IGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------V 74 (231)
Q Consensus 4 ~~~ilVtGa--tG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~ 74 (231)
+++++|||| +++||.+++++|+++|+.|++..|+.......+....+...+..+.+|++|++++.++++. +
T Consensus 7 ~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i 86 (256)
T PRK07889 7 GKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDGL 86 (256)
T ss_pred CCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999 8999999999999999999998876421111111122224567889999999988776643 6
Q ss_pred CEEEEccc
Q 043777 75 DVRFIPSE 82 (231)
Q Consensus 75 d~~f~ps~ 82 (231)
|+.+....
T Consensus 87 D~li~nAG 94 (256)
T PRK07889 87 DGVVHSIG 94 (256)
T ss_pred cEEEEccc
Confidence 77666443
No 235
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=98.33 E-value=1.2e-06 Score=74.87 Aligned_cols=77 Identities=17% Similarity=0.101 Sum_probs=56.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc------
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ------ 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~------ 73 (231)
+++++||||+++||++++++|+++| +.|++++|+... ..+....+. ..+.++.+|++|.+++.++++.
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~ 80 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLK--AEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGR 80 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHH--HHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 4789999999999999999999999 999999987532 111112222 3466788999999988776643
Q ss_pred -CCEEEEccc
Q 043777 74 -VDVRFIPSE 82 (231)
Q Consensus 74 -~d~~f~ps~ 82 (231)
+|+.++...
T Consensus 81 ~iD~lI~nAG 90 (314)
T TIGR01289 81 PLDALVCNAA 90 (314)
T ss_pred CCCEEEECCC
Confidence 677666443
No 236
>PRK07069 short chain dehydrogenase; Validated
Probab=98.33 E-value=1.8e-06 Score=70.81 Aligned_cols=76 Identities=18% Similarity=0.198 Sum_probs=54.4
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-----CCcEEEEEcCCCHHHHHHHHc-------c
Q 043777 6 NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-----SGVFDYWGLLEDEKSLLEAVK-------Q 73 (231)
Q Consensus 6 ~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-----~~v~~~~~D~~d~~~l~~al~-------~ 73 (231)
+++||||+|+||+++++.|+++|++|+++.|+..... .+..+.+. ..+..+.+|++|.+++.++++ .
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 79 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGL-DAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGG 79 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHH-HHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 4899999999999999999999999999998732111 11111221 123457899999999877765 3
Q ss_pred CCEEEEccc
Q 043777 74 VDVRFIPSE 82 (231)
Q Consensus 74 ~d~~f~ps~ 82 (231)
+|++++...
T Consensus 80 id~vi~~ag 88 (251)
T PRK07069 80 LSVLVNNAG 88 (251)
T ss_pred ccEEEECCC
Confidence 688777543
No 237
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=98.32 E-value=2.3e-06 Score=80.59 Aligned_cols=78 Identities=17% Similarity=0.104 Sum_probs=58.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh----c-CCcEEEEEcCCCHHHHHHHHc------
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF----H-SGVFDYWGLLEDEKSLLEAVK------ 72 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~----~-~~v~~~~~D~~d~~~l~~al~------ 72 (231)
.++++||||+|+||++++++|+++|+.|++++|+... . ......+ . ..+..+.+|++|.+++.++++
T Consensus 414 gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~-~-~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~ 491 (676)
T TIGR02632 414 RRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEA-A-EAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAY 491 (676)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHH-H-HHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 4789999999999999999999999999999987532 1 1111111 2 246678999999999988876
Q ss_pred -cCCEEEEcccC
Q 043777 73 -QVDVRFIPSEY 83 (231)
Q Consensus 73 -~~d~~f~ps~~ 83 (231)
++|++++....
T Consensus 492 g~iDilV~nAG~ 503 (676)
T TIGR02632 492 GGVDIVVNNAGI 503 (676)
T ss_pred CCCcEEEECCCC
Confidence 47887775543
No 238
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.32 E-value=2.1e-06 Score=71.63 Aligned_cols=76 Identities=12% Similarity=0.046 Sum_probs=55.4
Q ss_pred CCeEEEEcCCC--hhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc-----
Q 043777 4 KSNVLVIGAIG--RIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ----- 73 (231)
Q Consensus 4 ~~~ilVtGatG--~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~----- 73 (231)
+++++||||++ +||++++++|+++|+.|.+..|+... .+..+.+. ..+..+.+|++|++++.++++.
T Consensus 6 ~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~---~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 82 (262)
T PRK07984 6 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKL---KGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW 82 (262)
T ss_pred CCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhH---HHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc
Confidence 57899999985 89999999999999999888876311 11112221 3456788999999998877753
Q ss_pred --CCEEEEccc
Q 043777 74 --VDVRFIPSE 82 (231)
Q Consensus 74 --~d~~f~ps~ 82 (231)
+|..++...
T Consensus 83 g~iD~linnAg 93 (262)
T PRK07984 83 PKFDGFVHSIG 93 (262)
T ss_pred CCCCEEEECCc
Confidence 577666543
No 239
>PRK08703 short chain dehydrogenase; Provisional
Probab=98.32 E-value=2.9e-06 Score=69.33 Aligned_cols=77 Identities=16% Similarity=0.106 Sum_probs=53.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---c-CCcEEEEEcCCC--HHHHHHHH------
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---H-SGVFDYWGLLED--EKSLLEAV------ 71 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~-~~v~~~~~D~~d--~~~l~~al------ 71 (231)
+++++||||+|+||+++++.|+++|++|++++|+.... .+....+ . ..+..+.+|+++ .+++.+++
T Consensus 6 ~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~--~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 6 DKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKL--EKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHH--HHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999976321 1111111 1 345678899875 33444333
Q ss_pred --ccCCEEEEccc
Q 043777 72 --KQVDVRFIPSE 82 (231)
Q Consensus 72 --~~~d~~f~ps~ 82 (231)
..+|.+++...
T Consensus 84 ~~~~id~vi~~ag 96 (239)
T PRK08703 84 TQGKLDGIVHCAG 96 (239)
T ss_pred hCCCCCEEEEecc
Confidence 34688776543
No 240
>PRK08862 short chain dehydrogenase; Provisional
Probab=98.31 E-value=2e-06 Score=70.13 Aligned_cols=78 Identities=13% Similarity=0.073 Sum_probs=56.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc--------cC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK--------QV 74 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~--------~~ 74 (231)
+++++||||++.||++++++|.++|+.|.+..|+.+... ..+.+......+..+.+|++|++++.++++ .+
T Consensus 5 ~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~i 84 (227)
T PRK08862 5 SSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRAP 84 (227)
T ss_pred CeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 579999999999999999999999999999988753210 111111212346677899999998876653 46
Q ss_pred CEEEEcc
Q 043777 75 DVRFIPS 81 (231)
Q Consensus 75 d~~f~ps 81 (231)
|+.++..
T Consensus 85 D~li~na 91 (227)
T PRK08862 85 DVLVNNW 91 (227)
T ss_pred CEEEECC
Confidence 7777654
No 241
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.30 E-value=3.9e-06 Score=69.34 Aligned_cols=79 Identities=16% Similarity=-0.005 Sum_probs=56.7
Q ss_pred CCeEEEEcCCC--hhHHHHHHHHHhCCCCEEEEEcCCCC--------ch-hhhhhhhh---cCCcEEEEEcCCCHHHHHH
Q 043777 4 KSNVLVIGAIG--RIGYHFTRRSIEYGHPKFALIRDSAS--------NF-NFSLLRVF---HSGVFDYWGLLEDEKSLLE 69 (231)
Q Consensus 4 ~~~ilVtGatG--~iG~~i~~~L~~~g~~v~~~~R~~~~--------~~-~~~~~~~~---~~~v~~~~~D~~d~~~l~~ 69 (231)
+++++||||+| +||.+++++|+++|++|+++.|+... .. .......+ ...+.++.+|+++.+++..
T Consensus 5 ~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 84 (256)
T PRK12748 5 KKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPNR 84 (256)
T ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence 46899999995 79999999999999999999887221 00 00011111 2357788999999998877
Q ss_pred HHcc-------CCEEEEccc
Q 043777 70 AVKQ-------VDVRFIPSE 82 (231)
Q Consensus 70 al~~-------~d~~f~ps~ 82 (231)
+++. +|++++...
T Consensus 85 ~~~~~~~~~g~id~vi~~ag 104 (256)
T PRK12748 85 VFYAVSERLGDPSILINNAA 104 (256)
T ss_pred HHHHHHHhCCCCCEEEECCC
Confidence 6653 688777543
No 242
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=98.30 E-value=1.1e-06 Score=67.69 Aligned_cols=76 Identities=20% Similarity=0.197 Sum_probs=54.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc-------
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ------- 73 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~------- 73 (231)
|+++||||+|.||+.++++|+++| ..|.++.|+.......+....+. ..+.++++|+++.+++.++++.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 579999999999999999999995 56777777711101122222222 5677889999999998877764
Q ss_pred CCEEEEc
Q 043777 74 VDVRFIP 80 (231)
Q Consensus 74 ~d~~f~p 80 (231)
+|++++.
T Consensus 81 ld~li~~ 87 (167)
T PF00106_consen 81 LDILINN 87 (167)
T ss_dssp ESEEEEE
T ss_pred ccccccc
Confidence 5666653
No 243
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.29 E-value=2.1e-06 Score=71.90 Aligned_cols=79 Identities=14% Similarity=0.069 Sum_probs=55.1
Q ss_pred CCCeEEEEcCCC--hhHHHHHHHHHhCCCCEEEEEcCCCCchh-hhhhhhhcCCcEEEEEcCCCHHHHHHHHcc------
Q 043777 3 GKSNVLVIGAIG--RIGYHFTRRSIEYGHPKFALIRDSASNFN-FSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ------ 73 (231)
Q Consensus 3 ~~~~ilVtGatG--~iG~~i~~~L~~~g~~v~~~~R~~~~~~~-~~~~~~~~~~v~~~~~D~~d~~~l~~al~~------ 73 (231)
+++.++||||++ +||+.++++|+++|+.|.+..|+...... .+..+.. .....+++|++|.+++.++++.
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~-g~~~~~~~Dv~d~~~v~~~~~~~~~~~g 84 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESL-GSDFVLPCDVEDIASVDAVFEALEKKWG 84 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhc-CCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 467899999996 99999999999999999998886321000 1111111 2234678999999988776653
Q ss_pred -CCEEEEccc
Q 043777 74 -VDVRFIPSE 82 (231)
Q Consensus 74 -~d~~f~ps~ 82 (231)
+|+.+....
T Consensus 85 ~iD~lVnnAG 94 (271)
T PRK06505 85 KLDFVVHAIG 94 (271)
T ss_pred CCCEEEECCc
Confidence 577665443
No 244
>PRK07041 short chain dehydrogenase; Provisional
Probab=98.29 E-value=1.9e-06 Score=69.85 Aligned_cols=73 Identities=19% Similarity=0.121 Sum_probs=55.9
Q ss_pred EEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh--cCCcEEEEEcCCCHHHHHHHHcc---CCEEEEccc
Q 043777 8 LVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF--HSGVFDYWGLLEDEKSLLEAVKQ---VDVRFIPSE 82 (231)
Q Consensus 8 lVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~--~~~v~~~~~D~~d~~~l~~al~~---~d~~f~ps~ 82 (231)
+||||+|+||++++++|+++|++|+++.|+... .......+ ..++.++.+|++|.+++.++++. +|..++...
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag 78 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDR--LAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAA 78 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 589999999999999999999999999997421 11111122 24577889999999999998875 687776543
No 245
>PRK06940 short chain dehydrogenase; Provisional
Probab=98.28 E-value=3.9e-06 Score=70.37 Aligned_cols=76 Identities=20% Similarity=0.104 Sum_probs=55.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc------C
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ------V 74 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~------~ 74 (231)
++.++|||| |+||++++++|. +|++|++++|+... ..+..+.+. ..+.++.+|++|.+++.++++. +
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~i 77 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEEN--LEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPV 77 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHH--HHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCC
Confidence 478999998 799999999996 89999999987431 111122222 3467789999999998887753 6
Q ss_pred CEEEEcccC
Q 043777 75 DVRFIPSEY 83 (231)
Q Consensus 75 d~~f~ps~~ 83 (231)
|++++....
T Consensus 78 d~li~nAG~ 86 (275)
T PRK06940 78 TGLVHTAGV 86 (275)
T ss_pred CEEEECCCc
Confidence 777765543
No 246
>PRK05599 hypothetical protein; Provisional
Probab=98.27 E-value=2.2e-06 Score=70.57 Aligned_cols=73 Identities=16% Similarity=0.144 Sum_probs=53.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc----CCcEEEEEcCCCHHHHHHHHcc-------
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH----SGVFDYWGLLEDEKSLLEAVKQ------- 73 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~----~~v~~~~~D~~d~~~l~~al~~------- 73 (231)
|+++||||+++||++++++|. +|+.|.+++|+... ..+..+.+. ..+.++.+|++|.+++.++++.
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~--~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 77 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEA--AQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGE 77 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHH--HHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCC
Confidence 579999999999999999998 59999999987532 111112221 2367889999999988776543
Q ss_pred CCEEEEc
Q 043777 74 VDVRFIP 80 (231)
Q Consensus 74 ~d~~f~p 80 (231)
+|+.++.
T Consensus 78 id~lv~n 84 (246)
T PRK05599 78 ISLAVVA 84 (246)
T ss_pred CCEEEEe
Confidence 5766653
No 247
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.27 E-value=5.4e-06 Score=65.98 Aligned_cols=80 Identities=19% Similarity=0.123 Sum_probs=61.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQVDVRFIPS 81 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~~d~~f~ps 81 (231)
.++++|+||+|.+|+.+++.|.+.|++|+++.|+... ..+..+.+. .+..+..+|..+.+++.++++++|+++...
T Consensus 28 ~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~--~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at 105 (194)
T cd01078 28 GKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLER--AQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAG 105 (194)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHH--HHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECC
Confidence 5789999999999999999999999999999987421 111112221 245667789999999999999999988766
Q ss_pred cCCC
Q 043777 82 EYGA 85 (231)
Q Consensus 82 ~~g~ 85 (231)
..|.
T Consensus 106 ~~g~ 109 (194)
T cd01078 106 AAGV 109 (194)
T ss_pred CCCc
Confidence 5554
No 248
>PRK06484 short chain dehydrogenase; Validated
Probab=98.25 E-value=4.5e-06 Score=76.11 Aligned_cols=77 Identities=19% Similarity=0.183 Sum_probs=58.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VDV 76 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d~ 76 (231)
+++++||||+|+||++++++|+++|+.|+++.|+... ..+..+.....+..+.+|++|++++.++++. +|+
T Consensus 269 ~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 346 (520)
T PRK06484 269 PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEG--AKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDV 346 (520)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 5789999999999999999999999999999987421 1111122224556789999999998877753 688
Q ss_pred EEEccc
Q 043777 77 RFIPSE 82 (231)
Q Consensus 77 ~f~ps~ 82 (231)
+++.+.
T Consensus 347 li~nAg 352 (520)
T PRK06484 347 LVNNAG 352 (520)
T ss_pred EEECCC
Confidence 777543
No 249
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.25 E-value=2.6e-06 Score=71.47 Aligned_cols=78 Identities=13% Similarity=0.121 Sum_probs=55.2
Q ss_pred CCeEEEEcCC--ChhHHHHHHHHHhCCCCEEEEEcCCCCchh-hhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------
Q 043777 4 KSNVLVIGAI--GRIGYHFTRRSIEYGHPKFALIRDSASNFN-FSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ------- 73 (231)
Q Consensus 4 ~~~ilVtGat--G~iG~~i~~~L~~~g~~v~~~~R~~~~~~~-~~~~~~~~~~v~~~~~D~~d~~~l~~al~~------- 73 (231)
+++++||||+ ++||+.++++|.++|+.|.+..|+...... .+....+... ..+.+|++|.+++.++++.
T Consensus 5 ~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~~g~ 83 (274)
T PRK08415 5 GKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKKDLGK 83 (274)
T ss_pred CcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 5899999997 799999999999999999988886321011 1111222222 5788999999988776653
Q ss_pred CCEEEEccc
Q 043777 74 VDVRFIPSE 82 (231)
Q Consensus 74 ~d~~f~ps~ 82 (231)
+|+.+....
T Consensus 84 iDilVnnAG 92 (274)
T PRK08415 84 IDFIVHSVA 92 (274)
T ss_pred CCEEEECCc
Confidence 577666544
No 250
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.25 E-value=4e-06 Score=69.55 Aligned_cols=78 Identities=12% Similarity=0.013 Sum_probs=55.2
Q ss_pred CCeEEEEcCC--ChhHHHHHHHHHhCCCCEEEEEcCCCCchh-hhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------
Q 043777 4 KSNVLVIGAI--GRIGYHFTRRSIEYGHPKFALIRDSASNFN-FSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ------- 73 (231)
Q Consensus 4 ~~~ilVtGat--G~iG~~i~~~L~~~g~~v~~~~R~~~~~~~-~~~~~~~~~~v~~~~~D~~d~~~l~~al~~------- 73 (231)
+++++||||+ ++||++++++|+++|++|.+..|+...... .+..+.+ ..+.++.+|++|.+++.++++.
T Consensus 10 ~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 88 (258)
T PRK07533 10 GKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEEL-DAPIFLPLDVREPGQLEAVFARIAEEWGR 88 (258)
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhh-ccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence 5789999998 599999999999999999998886421110 1111111 2345788999999988776543
Q ss_pred CCEEEEccc
Q 043777 74 VDVRFIPSE 82 (231)
Q Consensus 74 ~d~~f~ps~ 82 (231)
+|+.++...
T Consensus 89 ld~lv~nAg 97 (258)
T PRK07533 89 LDFLLHSIA 97 (258)
T ss_pred CCEEEEcCc
Confidence 577666443
No 251
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=98.24 E-value=2.6e-06 Score=70.92 Aligned_cols=77 Identities=18% Similarity=0.151 Sum_probs=52.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc----CCcEEEEEcCCCHHHH----HHHH-----
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH----SGVFDYWGLLEDEKSL----LEAV----- 71 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~----~~v~~~~~D~~d~~~l----~~al----- 71 (231)
+.++||||+|+||++++++|+++|++|.++.|+.... ..+..+.+. ..+..+.+|++|.+++ .+++
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~ 80 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAA-ASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFR 80 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHH-HHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHH
Confidence 5799999999999999999999999999887653211 111112221 3355688999998754 3333
Q ss_pred --ccCCEEEEccc
Q 043777 72 --KQVDVRFIPSE 82 (231)
Q Consensus 72 --~~~d~~f~ps~ 82 (231)
..+|++++...
T Consensus 81 ~~g~iD~lv~nAG 93 (267)
T TIGR02685 81 AFGRCDVLVNNAS 93 (267)
T ss_pred ccCCceEEEECCc
Confidence 24788776543
No 252
>PRK06484 short chain dehydrogenase; Validated
Probab=98.24 E-value=4.8e-06 Score=75.92 Aligned_cols=77 Identities=22% Similarity=0.166 Sum_probs=58.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VDV 76 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d~ 76 (231)
+++++||||+++||++++++|.++|++|.++.|+... ..+....+...+..+.+|++|++++.++++. +|+
T Consensus 5 ~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (520)
T PRK06484 5 SRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVER--ARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV 82 (520)
T ss_pred CeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 5789999999999999999999999999999987531 1122222334567789999999998777654 677
Q ss_pred EEEccc
Q 043777 77 RFIPSE 82 (231)
Q Consensus 77 ~f~ps~ 82 (231)
+++...
T Consensus 83 li~nag 88 (520)
T PRK06484 83 LVNNAG 88 (520)
T ss_pred EEECCC
Confidence 776543
No 253
>PRK06720 hypothetical protein; Provisional
Probab=98.24 E-value=4.5e-06 Score=65.09 Aligned_cols=77 Identities=13% Similarity=0.038 Sum_probs=54.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVD 75 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d 75 (231)
++.++||||+|+||+.+++.|.+.|++|.++.|+..... ..+.+........++.+|+++.+++.++++ .+|
T Consensus 16 gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~iD 95 (169)
T PRK06720 16 GKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRID 95 (169)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 578999999999999999999999999999988643100 011111112345678999999998877654 256
Q ss_pred EEEEc
Q 043777 76 VRFIP 80 (231)
Q Consensus 76 ~~f~p 80 (231)
..++.
T Consensus 96 ilVnn 100 (169)
T PRK06720 96 MLFQN 100 (169)
T ss_pred EEEEC
Confidence 65553
No 254
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=98.23 E-value=3.7e-06 Score=69.77 Aligned_cols=79 Identities=11% Similarity=0.021 Sum_probs=55.6
Q ss_pred CCeEEEEcCC--ChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc-----
Q 043777 4 KSNVLVIGAI--GRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ----- 73 (231)
Q Consensus 4 ~~~ilVtGat--G~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~----- 73 (231)
+++++||||+ +.||++++++|.+.|++|.+..|+.......+.++++. ..+.++.+|++|++++.++++.
T Consensus 6 ~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 85 (258)
T PRK07370 6 GKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQKW 85 (258)
T ss_pred CcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHHc
Confidence 5789999986 79999999999999999988776532111111122221 3456788999999998876653
Q ss_pred --CCEEEEccc
Q 043777 74 --VDVRFIPSE 82 (231)
Q Consensus 74 --~d~~f~ps~ 82 (231)
+|+.++...
T Consensus 86 g~iD~lv~nag 96 (258)
T PRK07370 86 GKLDILVHCLA 96 (258)
T ss_pred CCCCEEEEccc
Confidence 577665443
No 255
>PRK08324 short chain dehydrogenase; Validated
Probab=98.22 E-value=5.5e-06 Score=78.16 Aligned_cols=77 Identities=19% Similarity=0.124 Sum_probs=59.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVK-------QV 74 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~-------~~ 74 (231)
.++++||||+|+||+++++.|+++|+.|++++|+... .......+. .++.++.+|++|.+++.++++ ++
T Consensus 422 gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~--~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~i 499 (681)
T PRK08324 422 GKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEA--AEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGV 499 (681)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHH--HHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999999999999999999999999999997532 111112222 367789999999999887776 47
Q ss_pred CEEEEccc
Q 043777 75 DVRFIPSE 82 (231)
Q Consensus 75 d~~f~ps~ 82 (231)
|++++...
T Consensus 500 DvvI~~AG 507 (681)
T PRK08324 500 DIVVSNAG 507 (681)
T ss_pred CEEEECCC
Confidence 88887554
No 256
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=98.20 E-value=7.4e-06 Score=62.85 Aligned_cols=77 Identities=19% Similarity=0.193 Sum_probs=53.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCCch-hhhhhhhh---cCCcEEEEEcCCCHHHHHHHHcc------
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSASNF-NFSLLRVF---HSGVFDYWGLLEDEKSLLEAVKQ------ 73 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~~~-~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~~------ 73 (231)
++++|+||+|++|.+++++|.++|+ .|.++.|+..... .....+.+ ..++.++.+|+++++++.+++..
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG 80 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4789999999999999999999996 5777777653211 11001222 24566788999999888877654
Q ss_pred -CCEEEEcc
Q 043777 74 -VDVRFIPS 81 (231)
Q Consensus 74 -~d~~f~ps 81 (231)
+|.+++..
T Consensus 81 ~id~li~~a 89 (180)
T smart00822 81 PLRGVIHAA 89 (180)
T ss_pred CeeEEEEcc
Confidence 47666643
No 257
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.20 E-value=3.3e-06 Score=70.19 Aligned_cols=77 Identities=10% Similarity=0.086 Sum_probs=54.8
Q ss_pred CCeEEEEcC--CChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc-----
Q 043777 4 KSNVLVIGA--IGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ----- 73 (231)
Q Consensus 4 ~~~ilVtGa--tG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~----- 73 (231)
+++++|||| +++||++++++|+++|++|++..|... . .+.++++. .....+++|++|++++.++++.
T Consensus 6 ~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 82 (261)
T PRK08690 6 GKKILITGMISERSIAYGIAKACREQGAELAFTYVVDK-L--EERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHW 82 (261)
T ss_pred CcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHH-H--HHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHh
Confidence 578999997 679999999999999999988776531 1 11122221 2345689999999998877653
Q ss_pred --CCEEEEcccC
Q 043777 74 --VDVRFIPSEY 83 (231)
Q Consensus 74 --~d~~f~ps~~ 83 (231)
+|+.++.+..
T Consensus 83 g~iD~lVnnAG~ 94 (261)
T PRK08690 83 DGLDGLVHSIGF 94 (261)
T ss_pred CCCcEEEECCcc
Confidence 6776665433
No 258
>PRK07578 short chain dehydrogenase; Provisional
Probab=98.19 E-value=8.9e-06 Score=64.63 Aligned_cols=61 Identities=26% Similarity=0.265 Sum_probs=51.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc---cCCEEEEcc
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK---QVDVRFIPS 81 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~---~~d~~f~ps 81 (231)
|+++||||+|+||++++++|.++ ++|.++.|+.. .+.+|++|.+++.++++ ++|++++.+
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~----------------~~~~D~~~~~~~~~~~~~~~~id~lv~~a 63 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG----------------DVQVDITDPASIRALFEKVGKVDAVVSAA 63 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC----------------ceEecCCChHHHHHHHHhcCCCCEEEECC
Confidence 47999999999999999999999 89999888631 36789999999988887 478877755
Q ss_pred c
Q 043777 82 E 82 (231)
Q Consensus 82 ~ 82 (231)
.
T Consensus 64 g 64 (199)
T PRK07578 64 G 64 (199)
T ss_pred C
Confidence 4
No 259
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.18 E-value=4.4e-06 Score=66.53 Aligned_cols=69 Identities=19% Similarity=0.254 Sum_probs=54.7
Q ss_pred CCCCCeEEEEcCC-ChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc
Q 043777 1 MAGKSNVLVIGAI-GRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ 73 (231)
Q Consensus 1 M~~~~~ilVtGat-G~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~ 73 (231)
|+..++|+|||++ |+||.++++++.+.|+.|.+..|+.+. .+++. ...++..++.|+++++++......
T Consensus 4 ~~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~--M~~L~--~~~gl~~~kLDV~~~~~V~~v~~e 73 (289)
T KOG1209|consen 4 QSQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEP--MAQLA--IQFGLKPYKLDVSKPEEVVTVSGE 73 (289)
T ss_pred ccCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccch--HhhHH--HhhCCeeEEeccCChHHHHHHHHH
Confidence 4456889999887 899999999999999999999998653 12221 126788999999999998776554
No 260
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.18 E-value=5.6e-06 Score=68.81 Aligned_cols=74 Identities=11% Similarity=0.060 Sum_probs=52.7
Q ss_pred CCeEEEEcCCC--hhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc-----
Q 043777 4 KSNVLVIGAIG--RIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ----- 73 (231)
Q Consensus 4 ~~~ilVtGatG--~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~----- 73 (231)
++.++||||++ +||++++++|.++|+.|.+..|+... .+.++.+. .....+++|++|++++.++++.
T Consensus 8 ~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~---~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (260)
T PRK06603 8 GKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVL---EKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKW 84 (260)
T ss_pred CcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHH---HHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHc
Confidence 57899999997 89999999999999999888776311 11122221 1233568999999998877753
Q ss_pred --CCEEEEc
Q 043777 74 --VDVRFIP 80 (231)
Q Consensus 74 --~d~~f~p 80 (231)
+|+.+..
T Consensus 85 g~iDilVnn 93 (260)
T PRK06603 85 GSFDFLLHG 93 (260)
T ss_pred CCccEEEEc
Confidence 5665553
No 261
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=98.18 E-value=7.1e-06 Score=64.60 Aligned_cols=69 Identities=22% Similarity=0.245 Sum_probs=49.6
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCCch-hhhhhhhhc---CCcEEEEEcCCCHHHHHHHHccC
Q 043777 6 NVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSASNF-NFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQV 74 (231)
Q Consensus 6 ~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~~~-~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~~ 74 (231)
+++||||+|.+|..+++.|.+++. +++++.|+....+ ..+.++.+. ..+.++.+|++|++++.++++.+
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~ 75 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQL 75 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTS
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHH
Confidence 589999999999999999999984 6888888832211 122333443 44566789999999999999764
No 262
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.17 E-value=5.1e-06 Score=69.58 Aligned_cols=78 Identities=13% Similarity=0.083 Sum_probs=54.5
Q ss_pred CCeEEEEcCC--ChhHHHHHHHHHhCCCCEEEEEcCCCCchhh-hhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------
Q 043777 4 KSNVLVIGAI--GRIGYHFTRRSIEYGHPKFALIRDSASNFNF-SLLRVFHSGVFDYWGLLEDEKSLLEAVKQ------- 73 (231)
Q Consensus 4 ~~~ilVtGat--G~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~-~~~~~~~~~v~~~~~D~~d~~~l~~al~~------- 73 (231)
+++++||||+ ++||++++++|+++|++|++..|+....... +..+.+ .....+++|++|++++.++++.
T Consensus 10 ~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 88 (272)
T PRK08159 10 GKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAEL-GAFVAGHCDVTDEASIDAVFETLEKKWGK 88 (272)
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhc-CCceEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 5789999997 7999999999999999998887753110111 111111 2345689999999998876653
Q ss_pred CCEEEEccc
Q 043777 74 VDVRFIPSE 82 (231)
Q Consensus 74 ~d~~f~ps~ 82 (231)
+|+.++...
T Consensus 89 iD~lv~nAG 97 (272)
T PRK08159 89 LDFVVHAIG 97 (272)
T ss_pred CcEEEECCc
Confidence 577665443
No 263
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=98.16 E-value=9.5e-06 Score=70.80 Aligned_cols=72 Identities=19% Similarity=0.183 Sum_probs=58.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFI 79 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~ 79 (231)
+|+|+|.|| |+||+.++..|.++| .+|++.+|+... ...+.... .+++.+++|..|.+++.+++++.|+++.
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~---~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn 74 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEK---CARIAELIGGKVEALQVDAADVDALVALIKDFDLVIN 74 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHH---HHHHHhhccccceeEEecccChHHHHHHHhcCCEEEE
Confidence 368999999 999999999999999 899999998532 21121222 5789999999999999999999998664
No 264
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.16 E-value=1.4e-05 Score=71.69 Aligned_cols=77 Identities=14% Similarity=0.016 Sum_probs=56.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV 76 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~ 76 (231)
+++++||||+|+||+.+++.|.++|++|+++.|+.......+.... .+...+.+|++|.+++.++++ .+|+
T Consensus 210 g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 287 (450)
T PRK08261 210 GKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANR--VGGTALALDITAPDAPARIAEHLAERHGGLDI 287 (450)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHH--cCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence 5789999999999999999999999999999885321111111111 345678999999998877665 3688
Q ss_pred EEEccc
Q 043777 77 RFIPSE 82 (231)
Q Consensus 77 ~f~ps~ 82 (231)
+++...
T Consensus 288 vi~~AG 293 (450)
T PRK08261 288 VVHNAG 293 (450)
T ss_pred EEECCC
Confidence 887554
No 265
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=98.15 E-value=3.5e-06 Score=71.24 Aligned_cols=55 Identities=15% Similarity=0.155 Sum_probs=45.1
Q ss_pred EEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc--CCEEEEcc
Q 043777 8 LVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ--VDVRFIPS 81 (231)
Q Consensus 8 lVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~--~d~~f~ps 81 (231)
||||||||||++|++.|+++|+.|+++.+.. .+|++|.+++.++++. +|++++-.
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~~-------------------~~Dl~~~~~l~~~~~~~~~d~Vih~A 57 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTHK-------------------ELDLTRQADVEAFFAKEKPTYVILAA 57 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeeccc-------------------cCCCCCHHHHHHHHhccCCCEEEEee
Confidence 6999999999999999999999887654321 3699999999998875 68887754
No 266
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=98.15 E-value=4.4e-06 Score=70.04 Aligned_cols=74 Identities=19% Similarity=0.183 Sum_probs=56.0
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC-ch-hhhhhhhhcCCcEEEEEcCCCHH----HHHHHHccCCEEEE
Q 043777 6 NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS-NF-NFSLLRVFHSGVFDYWGLLEDEK----SLLEAVKQVDVRFI 79 (231)
Q Consensus 6 ~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~-~~-~~~~~~~~~~~v~~~~~D~~d~~----~l~~al~~~d~~f~ 79 (231)
=.+|||||.+||++.+++|.++|.+|++++|..++ +. +.+..+.....++++..|+++.+ .+.+.+.+.|+-++
T Consensus 51 WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~VgIL 130 (312)
T KOG1014|consen 51 WAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVGIL 130 (312)
T ss_pred EEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceEEE
Confidence 47899999999999999999999999999998764 22 23333333355778889998765 47777778887443
No 267
>PLN02780 ketoreductase/ oxidoreductase
Probab=98.14 E-value=1.1e-05 Score=69.19 Aligned_cols=80 Identities=15% Similarity=0.118 Sum_probs=52.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhh-hhc-CCcEEEEEcCCC--HHH---HHHHHccCC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLR-VFH-SGVFDYWGLLED--EKS---LLEAVKQVD 75 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~-~~~-~~v~~~~~D~~d--~~~---l~~al~~~d 75 (231)
++.++||||||+||++++++|.++|++|.+++|+...-. ..+.+. ... ..+..+.+|+++ .+. +.+.+.+.|
T Consensus 53 g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~d 132 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGLD 132 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCCC
Confidence 478999999999999999999999999999999753210 011111 111 245667899985 333 334444444
Q ss_pred --EEEEcccC
Q 043777 76 --VRFIPSEY 83 (231)
Q Consensus 76 --~~f~ps~~ 83 (231)
+.+..+..
T Consensus 133 idilVnnAG~ 142 (320)
T PLN02780 133 VGVLINNVGV 142 (320)
T ss_pred ccEEEEecCc
Confidence 66654443
No 268
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=98.10 E-value=9.6e-06 Score=64.23 Aligned_cols=66 Identities=18% Similarity=0.249 Sum_probs=50.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK 72 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~ 72 (231)
+-+||||||+.+||..++++|++.|.+|++..|+... -+......+.+....||+.|.++..+.++
T Consensus 5 gnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~---L~e~~~~~p~~~t~v~Dv~d~~~~~~lve 70 (245)
T COG3967 5 GNTILITGGASGIGLALAKRFLELGNTVIICGRNEER---LAEAKAENPEIHTEVCDVADRDSRRELVE 70 (245)
T ss_pred CcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHH---HHHHHhcCcchheeeecccchhhHHHHHH
Confidence 4589999999999999999999999999999998531 11111111667778999999987655544
No 269
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=98.10 E-value=1.7e-05 Score=65.18 Aligned_cols=81 Identities=20% Similarity=0.142 Sum_probs=55.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc----CCcEEEEEcCCC-HHHHHHHHcc---
Q 043777 2 AGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH----SGVFDYWGLLED-EKSLLEAVKQ--- 73 (231)
Q Consensus 2 ~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~----~~v~~~~~D~~d-~~~l~~al~~--- 73 (231)
.++++++||||+++||+.+++.|.++|+.|+++.|............... ..+....+|+++ .+++..+++.
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~ 82 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEE 82 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHH
Confidence 34689999999999999999999999999888888753200001111111 246667899998 8776655543
Q ss_pred ----CCEEEEccc
Q 043777 74 ----VDVRFIPSE 82 (231)
Q Consensus 74 ----~d~~f~ps~ 82 (231)
+|+.+..+.
T Consensus 83 ~~g~id~lvnnAg 95 (251)
T COG1028 83 EFGRIDILVNNAG 95 (251)
T ss_pred HcCCCCEEEECCC
Confidence 675554433
No 270
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=98.08 E-value=8.7e-06 Score=67.32 Aligned_cols=66 Identities=20% Similarity=0.081 Sum_probs=49.9
Q ss_pred eEEEEcCCChhHHHHHHHHHh----CCCCEEEEEcCCCCchhhhhhhhh----c-CCcEEEEEcCCCHHHHHHHHcc
Q 043777 6 NVLVIGAIGRIGYHFTRRSIE----YGHPKFALIRDSASNFNFSLLRVF----H-SGVFDYWGLLEDEKSLLEAVKQ 73 (231)
Q Consensus 6 ~ilVtGatG~iG~~i~~~L~~----~g~~v~~~~R~~~~~~~~~~~~~~----~-~~v~~~~~D~~d~~~l~~al~~ 73 (231)
.++||||+|+||.+++++|.+ +|+.|.++.|+... ..+..+.+ . ..+.++.+|++|.+++.++++.
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~--~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~ 76 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEA--LRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKA 76 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHH--HHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHH
Confidence 589999999999999999997 79999999997532 11111122 1 3467789999999988877654
No 271
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.06 E-value=1.3e-05 Score=66.71 Aligned_cols=78 Identities=9% Similarity=0.020 Sum_probs=53.8
Q ss_pred CCeEEEEcC--CChhHHHHHHHHHhCCCCEEEEEcCCCCchh-hhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------
Q 043777 4 KSNVLVIGA--IGRIGYHFTRRSIEYGHPKFALIRDSASNFN-FSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ------- 73 (231)
Q Consensus 4 ~~~ilVtGa--tG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~-~~~~~~~~~~v~~~~~D~~d~~~l~~al~~------- 73 (231)
+++++|||| ++.||++++++|+++|++|.+..|....... .+....+ .....+.+|++|++++.++++.
T Consensus 6 ~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (260)
T PRK06997 6 GKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF-GSDLVFPCDVASDEQIDALFASLGQHWDG 84 (260)
T ss_pred CcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhc-CCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence 578999996 6799999999999999999887664211111 1111111 2234678999999998877753
Q ss_pred CCEEEEccc
Q 043777 74 VDVRFIPSE 82 (231)
Q Consensus 74 ~d~~f~ps~ 82 (231)
+|+.+....
T Consensus 85 iD~lvnnAG 93 (260)
T PRK06997 85 LDGLVHSIG 93 (260)
T ss_pred CcEEEEccc
Confidence 677666443
No 272
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.06 E-value=1e-05 Score=69.17 Aligned_cols=70 Identities=17% Similarity=0.066 Sum_probs=54.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhc-CCcEEEEEcCCCHHHHHHHHcc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQ 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~ 73 (231)
.+.++||||+.+||..++++|..+|.+|+...|+..... +.+...... ..+.++++|+++.+++.+..+.
T Consensus 35 ~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~ 107 (314)
T KOG1208|consen 35 GKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEE 107 (314)
T ss_pred CcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHH
Confidence 468999999999999999999999999999999863311 222222233 5677899999999998877664
No 273
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.99 E-value=3.2e-05 Score=63.98 Aligned_cols=78 Identities=14% Similarity=0.050 Sum_probs=53.9
Q ss_pred CCeEEEEcCCC--hhHHHHHHHHHhCCCCEEEEEcCCCC--------ch-hhhhhhhhc---CCcEEEEEcCCCHHHHHH
Q 043777 4 KSNVLVIGAIG--RIGYHFTRRSIEYGHPKFALIRDSAS--------NF-NFSLLRVFH---SGVFDYWGLLEDEKSLLE 69 (231)
Q Consensus 4 ~~~ilVtGatG--~iG~~i~~~L~~~g~~v~~~~R~~~~--------~~-~~~~~~~~~---~~v~~~~~D~~d~~~l~~ 69 (231)
+++++||||+| +||++++++|+++|+.|++..|.... .. ..+....+. ..+..+.+|++|.+++.+
T Consensus 6 ~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~~ 85 (256)
T PRK12859 6 NKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPKE 85 (256)
T ss_pred CcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHH
Confidence 57899999995 89999999999999998887542100 00 011111222 346678999999998877
Q ss_pred HHcc-------CCEEEEcc
Q 043777 70 AVKQ-------VDVRFIPS 81 (231)
Q Consensus 70 al~~-------~d~~f~ps 81 (231)
++.. +|++++..
T Consensus 86 ~~~~~~~~~g~id~li~~a 104 (256)
T PRK12859 86 LLNKVTEQLGYPHILVNNA 104 (256)
T ss_pred HHHHHHHHcCCCcEEEECC
Confidence 7753 57777644
No 274
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.97 E-value=3.1e-05 Score=64.70 Aligned_cols=68 Identities=13% Similarity=0.104 Sum_probs=52.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHcc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQ 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~ 73 (231)
+..||||||++++|+.++.++.++|..+.+.+.+.... .+..+... ..+..+.||+++.+++.+..+.
T Consensus 38 g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~--~etv~~~~~~g~~~~y~cdis~~eei~~~a~~ 107 (300)
T KOG1201|consen 38 GEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGN--EETVKEIRKIGEAKAYTCDISDREEIYRLAKK 107 (300)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccch--HHHHHHHHhcCceeEEEecCCCHHHHHHHHHH
Confidence 57899999999999999999999999888888876432 11222222 2578899999999988776654
No 275
>PLN00015 protochlorophyllide reductase
Probab=97.92 E-value=1.8e-05 Score=67.38 Aligned_cols=73 Identities=16% Similarity=0.079 Sum_probs=53.6
Q ss_pred EEEcCCChhHHHHHHHHHhCC-CCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777 8 LVIGAIGRIGYHFTRRSIEYG-HPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ-------VDV 76 (231)
Q Consensus 8 lVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~-------~d~ 76 (231)
+||||+++||.+++++|+++| +.|++..|+... ..+....+. ..+.++.+|++|.+++.++++. +|+
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~ 78 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLK--AERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDV 78 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHH--HHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCE
Confidence 589999999999999999999 999998886431 111122222 3467789999999998777653 577
Q ss_pred EEEccc
Q 043777 77 RFIPSE 82 (231)
Q Consensus 77 ~f~ps~ 82 (231)
+++...
T Consensus 79 lInnAG 84 (308)
T PLN00015 79 LVCNAA 84 (308)
T ss_pred EEECCC
Confidence 766543
No 276
>PRK09620 hypothetical protein; Provisional
Probab=97.90 E-value=5.3e-05 Score=61.93 Aligned_cols=75 Identities=16% Similarity=0.213 Sum_probs=51.8
Q ss_pred CCCeEEEEcCC----------------ChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCC--cEEEEEcCCCH
Q 043777 3 GKSNVLVIGAI----------------GRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSG--VFDYWGLLEDE 64 (231)
Q Consensus 3 ~~~~ilVtGat----------------G~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~--v~~~~~D~~d~ 64 (231)
.+++|+||+|. ||+|++|+++|+++|++|+++.+..+..+ .....+ ...+.++....
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~-----~~~~~~~~~~~V~s~~d~~ 76 (229)
T PRK09620 2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKP-----NDINNQLELHPFEGIIDLQ 76 (229)
T ss_pred CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCC-----cccCCceeEEEEecHHHHH
Confidence 37899999885 99999999999999999999887542111 011112 23355544444
Q ss_pred HHHHHHHc--cCCEEEEccc
Q 043777 65 KSLLEAVK--QVDVRFIPSE 82 (231)
Q Consensus 65 ~~l~~al~--~~d~~f~ps~ 82 (231)
+.+.++++ ++|++||.+.
T Consensus 77 ~~l~~~~~~~~~D~VIH~AA 96 (229)
T PRK09620 77 DKMKSIITHEKVDAVIMAAA 96 (229)
T ss_pred HHHHHHhcccCCCEEEECcc
Confidence 67888885 5899888543
No 277
>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]
Probab=97.89 E-value=3.9e-05 Score=61.65 Aligned_cols=72 Identities=18% Similarity=0.139 Sum_probs=52.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhC-CCCEEEEEcCCCCchhhhhhhhh--c-CCcEEEEEcCCCHHHHHHHHccC
Q 043777 1 MAGKSNVLVIGAIGRIGYHFTRRSIEY-GHPKFALIRDSASNFNFSLLRVF--H-SGVFDYWGLLEDEKSLLEAVKQV 74 (231)
Q Consensus 1 M~~~~~ilVtGatG~iG~~i~~~L~~~-g~~v~~~~R~~~~~~~~~~~~~~--~-~~v~~~~~D~~d~~~l~~al~~~ 74 (231)
|+ ++.++||||..+||.-++++|++. |.++.+..|+....+ .+.++.. . +++++++.|+++.+++.++.+++
T Consensus 1 Ms-pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a-~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V 76 (249)
T KOG1611|consen 1 MS-PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKA-ATELALKSKSDSRVHIIQLDVTCDESIDNFVQEV 76 (249)
T ss_pred CC-CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHh-hHHHHHhhccCCceEEEEEecccHHHHHHHHHHH
Confidence 77 567999999999999999999975 566666555521111 2222222 2 78999999999999988877653
No 278
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=97.88 E-value=3.5e-05 Score=72.58 Aligned_cols=58 Identities=24% Similarity=0.223 Sum_probs=44.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc--cCCEEEEcc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK--QVDVRFIPS 81 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~--~~d~~f~ps 81 (231)
.|+||||||+||||++|++.|.++|++|... .+|++|.+.+...++ ++|++++.+
T Consensus 380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~-----------------------~~~l~d~~~v~~~i~~~~pd~Vih~A 436 (668)
T PLN02260 380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG-----------------------KGRLEDRSSLLADIRNVKPTHVFNAA 436 (668)
T ss_pred CceEEEECCCchHHHHHHHHHHhCCCeEEee-----------------------ccccccHHHHHHHHHhhCCCEEEECC
Confidence 5799999999999999999999999887311 125667777777776 478888866
Q ss_pred cCC
Q 043777 82 EYG 84 (231)
Q Consensus 82 ~~g 84 (231)
.+.
T Consensus 437 a~~ 439 (668)
T PLN02260 437 GVT 439 (668)
T ss_pred ccc
Confidence 543
No 279
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=97.88 E-value=3.4e-05 Score=62.09 Aligned_cols=70 Identities=20% Similarity=0.153 Sum_probs=53.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhc-CCcEEEEEcCCCHHHHHHHHcc
Q 043777 3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQ 73 (231)
Q Consensus 3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~ 73 (231)
.++++++||+.|+||..+.++|+++|..+.++.-+.. ++ .+++....+ ..+.++++|+++..++.++++.
T Consensus 4 tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~E-n~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~k 76 (261)
T KOG4169|consen 4 TGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEE-NPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDK 76 (261)
T ss_pred cCceEEEecCCchhhHHHHHHHHHcCchheeehhhhh-CHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHH
Confidence 3689999999999999999999999977665544332 23 233333333 6677899999999999988876
No 280
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.79 E-value=7.4e-05 Score=64.32 Aligned_cols=79 Identities=22% Similarity=0.159 Sum_probs=51.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC-------CCEEEEEcCCCCc-hhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYG-------HPKFALIRDSASN-FNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVD 75 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g-------~~v~~~~R~~~~~-~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d 75 (231)
+.||+||||+|++|++++..|+..+ .++++++|+.... ..... ..+.........|+....++.++++++|
T Consensus 2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~-~Dl~d~~~~~~~~~~~~~~~~~~l~~aD 80 (325)
T cd01336 2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVV-MELQDCAFPLLKSVVATTDPEEAFKDVD 80 (325)
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCcccccccee-eehhhccccccCCceecCCHHHHhCCCC
Confidence 4689999999999999999999855 4799999865311 00000 0010111122235555567889999999
Q ss_pred EEEEcccC
Q 043777 76 VRFIPSEY 83 (231)
Q Consensus 76 ~~f~ps~~ 83 (231)
++++....
T Consensus 81 iVI~tAG~ 88 (325)
T cd01336 81 VAILVGAM 88 (325)
T ss_pred EEEEeCCc
Confidence 99986543
No 281
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=97.78 E-value=8.1e-05 Score=75.48 Aligned_cols=78 Identities=21% Similarity=0.233 Sum_probs=56.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC----CCEEEEEcCCCCch-hhhhhhh----------hcCCcEEEEEcCCC-----
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYG----HPKFALIRDSASNF-NFSLLRV----------FHSGVFDYWGLLED----- 63 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g----~~v~~~~R~~~~~~-~~~~~~~----------~~~~v~~~~~D~~d----- 63 (231)
.++|+|||||||+|++++++|++++ +.|+++.|...... ....... ...++.++.+|+++
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence 4789999999999999999999887 78899999754311 1111110 01367889999974
Q ss_pred -HHHHHHHHccCCEEEEcc
Q 043777 64 -EKSLLEAVKQVDVRFIPS 81 (231)
Q Consensus 64 -~~~l~~al~~~d~~f~ps 81 (231)
.+.+.++.+++|+++|..
T Consensus 1051 ~~~~~~~l~~~~d~iiH~A 1069 (1389)
T TIGR03443 1051 SDEKWSDLTNEVDVIIHNG 1069 (1389)
T ss_pred CHHHHHHHHhcCCEEEECC
Confidence 456777778899988843
No 282
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=97.78 E-value=0.00013 Score=59.69 Aligned_cols=67 Identities=18% Similarity=0.083 Sum_probs=46.2
Q ss_pred CCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCC--HHHHHHHHccCCEEEEcccCC
Q 043777 12 AIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLED--EKSLLEAVKQVDVRFIPSEYG 84 (231)
Q Consensus 12 atG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d--~~~l~~al~~~d~~f~ps~~g 84 (231)
+||++|++|+++|+++|++|+++.|+.... .....++.++.++-.+ .+.+.+.++++|++++.+...
T Consensus 24 SSG~iG~aLA~~L~~~G~~V~li~r~~~~~------~~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvs 92 (229)
T PRK06732 24 STGQLGKIIAETFLAAGHEVTLVTTKTAVK------PEPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVS 92 (229)
T ss_pred cchHHHHHHHHHHHhCCCEEEEEECccccc------CCCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccC
Confidence 489999999999999999999998764211 0001456666654322 245667777899988866543
No 283
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=97.76 E-value=9.2e-05 Score=62.10 Aligned_cols=70 Identities=16% Similarity=0.025 Sum_probs=50.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCc-hhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHc
Q 043777 3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASN-FNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVK 72 (231)
Q Consensus 3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~-~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~ 72 (231)
..|.++||||+.+||++++.+|.+.|..|++..|+...- ...+.+.... ..+..+.+|+++.+...++++
T Consensus 7 ~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~ 80 (270)
T KOG0725|consen 7 AGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVE 80 (270)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHH
Confidence 367899999999999999999999999999999986431 1011111111 346778999998877655443
No 284
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=97.75 E-value=0.00017 Score=58.89 Aligned_cols=70 Identities=27% Similarity=0.366 Sum_probs=56.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHH-HccCCEEEEc
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEA-VKQVDVRFIP 80 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~a-l~~~d~~f~p 80 (231)
|+++|.|+ |.+|+.+++.|.++||+|+++.++... ..+... ....++.+|-+|++.|.++ +.++|+....
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~-----~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~ 73 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEER-----VEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAA 73 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHH-----HHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEe
Confidence 67899998 999999999999999999999998531 111122 5678899999999999998 7888886543
No 285
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=97.71 E-value=0.00022 Score=60.43 Aligned_cols=81 Identities=14% Similarity=0.030 Sum_probs=58.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCC-EEEEEcCCCC-chhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHccCCEEE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHP-KFALIRDSAS-NFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQVDVRF 78 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~-v~~~~R~~~~-~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~~d~~f 78 (231)
.++++|+|| |++|++++.+|.+.|.. |+++.|+... ....+..+.+. ..+.+..+|+.+.+++.+.++.+|+++
T Consensus 126 ~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~DilI 204 (289)
T PRK12548 126 GKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDILV 204 (289)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEEE
Confidence 568999999 89999999999999986 9999997521 01112222222 334566789988888888888899888
Q ss_pred EcccCCC
Q 043777 79 IPSEYGA 85 (231)
Q Consensus 79 ~ps~~g~ 85 (231)
.....|.
T Consensus 205 NaTp~Gm 211 (289)
T PRK12548 205 NATLVGM 211 (289)
T ss_pred EeCCCCC
Confidence 7655554
No 286
>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]
Probab=97.66 E-value=0.00016 Score=58.94 Aligned_cols=70 Identities=20% Similarity=0.269 Sum_probs=53.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC-ch-hhhhhhhh----c-CCcEEEEEcCCCHHHHHHHHccC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS-NF-NFSLLRVF----H-SGVFDYWGLLEDEKSLLEAVKQV 74 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~-~~-~~~~~~~~----~-~~v~~~~~D~~d~~~l~~al~~~ 74 (231)
+..||||-||+-|+++++-|+..||+|+.+.|+.+. +. +.+.+-.- . .......+|++|...|.+.+..+
T Consensus 29 kvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i 105 (376)
T KOG1372|consen 29 KVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI 105 (376)
T ss_pred eEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc
Confidence 468999999999999999999999999999998765 21 11111100 1 33456789999999999888754
No 287
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=97.64 E-value=0.00036 Score=60.96 Aligned_cols=80 Identities=14% Similarity=0.052 Sum_probs=54.2
Q ss_pred CCeEEEEcCCChhHHH--HHHHHHhCCCCEEEEEcCCCC-c---------h---hhhhhhhhcCCcEEEEEcCCCHHHHH
Q 043777 4 KSNVLVIGAIGRIGYH--FTRRSIEYGHPKFALIRDSAS-N---------F---NFSLLRVFHSGVFDYWGLLEDEKSLL 68 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~--i~~~L~~~g~~v~~~~R~~~~-~---------~---~~~~~~~~~~~v~~~~~D~~d~~~l~ 68 (231)
+|++|||||++++|.+ ++++| ++|..+.++.+.... . . ..+..+.....+..+.+|+++.+++.
T Consensus 41 gK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~ 119 (398)
T PRK13656 41 PKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQ 119 (398)
T ss_pred CCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence 4799999999999999 89999 999998888753211 0 0 01111111123557899999998877
Q ss_pred HHHcc-------CCEEEEcccCC
Q 043777 69 EAVKQ-------VDVRFIPSEYG 84 (231)
Q Consensus 69 ~al~~-------~d~~f~ps~~g 84 (231)
++++. +|.+.+...++
T Consensus 120 ~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 120 KVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHhcCCCCEEEECCccC
Confidence 66553 67776654444
No 288
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=97.62 E-value=0.00017 Score=56.86 Aligned_cols=68 Identities=12% Similarity=0.022 Sum_probs=53.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHcc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQ 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~ 73 (231)
.+.++||||+.+||++|+..|.+.|+.|.+.+++... . .+....++ .+...+.||+.+..++...+++
T Consensus 14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~-A-~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e 83 (256)
T KOG1200|consen 14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAA-A-EATAGDLGGYGDHSAFSCDVSKAHDVQNTLEE 83 (256)
T ss_pred cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhh-H-HHHHhhcCCCCccceeeeccCcHHHHHHHHHH
Confidence 4679999999999999999999999999999887642 1 12223333 3566789999999988877765
No 289
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.59 E-value=0.00052 Score=57.83 Aligned_cols=70 Identities=13% Similarity=0.094 Sum_probs=53.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC-chhhhhhhhh-c-CCcEEEEEcCCCHHHHHHHHccC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS-NFNFSLLRVF-H-SGVFDYWGLLEDEKSLLEAVKQV 74 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~-~~~~~~~~~~-~-~~v~~~~~D~~d~~~l~~al~~~ 74 (231)
.+|+|||++..+|..++..+..+|++|+++.|+..+ .+....++-. . ..+.+..+|+.|.+++..++++.
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l 106 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEEL 106 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhh
Confidence 489999999999999999999999999999998654 1111111111 1 33567889999999998888764
No 290
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.54 E-value=0.00022 Score=55.23 Aligned_cols=68 Identities=25% Similarity=0.219 Sum_probs=52.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~ 73 (231)
.+.|+|||+.-+||+.++..|.+.|.+|+++.|++.. ..++.++-+.-+..+++|+.+.+.+.+++..
T Consensus 7 G~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~--L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~ 74 (245)
T KOG1207|consen 7 GVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEAN--LLSLVKETPSLIIPIVGDLSAWEALFKLLVP 74 (245)
T ss_pred ceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHH--HHHHHhhCCcceeeeEecccHHHHHHHhhcc
Confidence 5789999998899999999999999999999998521 1222222224477889999998888887764
No 291
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=97.54 E-value=0.00032 Score=61.72 Aligned_cols=70 Identities=26% Similarity=0.255 Sum_probs=51.6
Q ss_pred EEEEcCCChhHHHHHHHHHhCC-C-CEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777 7 VLVIGAIGRIGYHFTRRSIEYG-H-PKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFI 79 (231)
Q Consensus 7 ilVtGatG~iG~~i~~~L~~~g-~-~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~ 79 (231)
|+|.|| |++|+.+++.|.+.+ + +|++.+|+... ..+..+.+. .++..+.+|+.|.+++.++++++|++..
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin 73 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEK--AERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVIN 73 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHH--HHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHH--HHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEE
Confidence 789999 999999999999987 4 78999997531 112222213 7889999999999999999999999764
No 292
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=97.54 E-value=0.00045 Score=57.42 Aligned_cols=68 Identities=18% Similarity=0.216 Sum_probs=49.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc--CCEEE
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ--VDVRF 78 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~--~d~~f 78 (231)
|+|+|+||||. |+.+++.|.++|++|++.+|..... +.+.. .+...+..+..|.+++.+.+++ ++++.
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~---~~~~~--~g~~~v~~g~l~~~~l~~~l~~~~i~~VI 70 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGK---HLYPI--HQALTVHTGALDPQELREFLKRHSIDILV 70 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcc---ccccc--cCCceEEECCCCHHHHHHHHHhcCCCEEE
Confidence 58999999999 9999999999999999999876421 11111 2333445566788889888876 55533
No 293
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=97.53 E-value=0.00048 Score=61.76 Aligned_cols=68 Identities=21% Similarity=0.297 Sum_probs=55.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHH-HccCCEEEE
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEA-VKQVDVRFI 79 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~a-l~~~d~~f~ 79 (231)
|+|+|+|+ |.+|+++++.|.++|++|+++.|+... .+.+. .++.++.+|.++...+.++ ++++|.+++
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~------~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~ 71 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEER------LRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIA 71 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHH------HHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEE
Confidence 57999998 999999999999999999999886421 12221 4688999999999999988 888887655
No 294
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.48 E-value=0.00033 Score=54.15 Aligned_cols=71 Identities=15% Similarity=0.077 Sum_probs=57.7
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCC
Q 043777 3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVD 75 (231)
Q Consensus 3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d 75 (231)
++-..+||||+.++|+..++.|.++|.+|.+++-+.++. .+..+++..++.+...|+++++++..++..+.
T Consensus 8 kglvalvtggasglg~ataerlakqgasv~lldlp~skg--~~vakelg~~~vf~padvtsekdv~aala~ak 78 (260)
T KOG1199|consen 8 KGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKG--ADVAKELGGKVVFTPADVTSEKDVRAALAKAK 78 (260)
T ss_pred cCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccc--hHHHHHhCCceEEeccccCcHHHHHHHHHHHH
Confidence 345689999999999999999999999999999877652 22234555778889999999999999887643
No 295
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=97.46 E-value=0.00035 Score=60.38 Aligned_cols=32 Identities=25% Similarity=0.336 Sum_probs=28.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEE
Q 043777 1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKF 32 (231)
Q Consensus 1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~ 32 (231)
|+++++|+|+||||++|+.+++.|.+.+|++.
T Consensus 1 m~~~~~IaIvGATG~vG~eLlrlL~~~~hP~~ 32 (336)
T PRK05671 1 MSQPLDIAVVGATGTVGEALVQILEERDFPVG 32 (336)
T ss_pred CCCCCEEEEEccCCHHHHHHHHHHhhCCCCce
Confidence 77778999999999999999999998877654
No 296
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=97.45 E-value=0.00016 Score=63.44 Aligned_cols=38 Identities=32% Similarity=0.547 Sum_probs=34.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777 2 AGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA 39 (231)
Q Consensus 2 ~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~ 39 (231)
.+.++|+|+||||.+|+.+++.|+++|+.|.++.|+..
T Consensus 77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~ 114 (411)
T KOG1203|consen 77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQ 114 (411)
T ss_pred CCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChh
Confidence 34678999999999999999999999999999999864
No 297
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=97.45 E-value=0.00062 Score=60.19 Aligned_cols=69 Identities=20% Similarity=0.267 Sum_probs=52.6
Q ss_pred CCeEEEEcC----------------CChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHH
Q 043777 4 KSNVLVIGA----------------IGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSL 67 (231)
Q Consensus 4 ~~~ilVtGa----------------tG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l 67 (231)
+++++|||| +|.+|.+++++|.++|++|+++.++.+. ....+ +..+|+++.+++
T Consensus 188 gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~--------~~~~~--~~~~dv~~~~~~ 257 (399)
T PRK05579 188 GKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNL--------PTPAG--VKRIDVESAQEM 257 (399)
T ss_pred CCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccc--------cCCCC--cEEEccCCHHHH
Confidence 689999999 8999999999999999999999886421 01122 346799998888
Q ss_pred HHHHc----cCCEEEEccc
Q 043777 68 LEAVK----QVDVRFIPSE 82 (231)
Q Consensus 68 ~~al~----~~d~~f~ps~ 82 (231)
.+++. .+|+.+..+.
T Consensus 258 ~~~v~~~~~~~DilI~~Aa 276 (399)
T PRK05579 258 LDAVLAALPQADIFIMAAA 276 (399)
T ss_pred HHHHHHhcCCCCEEEEccc
Confidence 77775 3677766543
No 298
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=97.41 E-value=0.00052 Score=53.33 Aligned_cols=71 Identities=18% Similarity=0.142 Sum_probs=57.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC--CCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYG--HPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP 80 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g--~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p 80 (231)
+|..+|.||||-.|+.+++++++++ -.|+++.|+....+ +-...+.....|+...+++...+++.|+.|..
T Consensus 18 ~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~------at~k~v~q~~vDf~Kl~~~a~~~qg~dV~Fca 90 (238)
T KOG4039|consen 18 NMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDP------ATDKVVAQVEVDFSKLSQLATNEQGPDVLFCA 90 (238)
T ss_pred ccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCc------cccceeeeEEechHHHHHHHhhhcCCceEEEe
Confidence 6789999999999999999999998 36888888753222 11145566778999999999999999999974
No 299
>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]
Probab=97.40 E-value=0.00077 Score=60.20 Aligned_cols=78 Identities=18% Similarity=0.285 Sum_probs=54.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC---CCEEEEEcCCCCch-h--------hhhhhhhc-------CCcEEEEEcCCCH
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYG---HPKFALIRDSASNF-N--------FSLLRVFH-------SGVFDYWGLLEDE 64 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g---~~v~~~~R~~~~~~-~--------~~~~~~~~-------~~v~~~~~D~~d~ 64 (231)
+++|+|||||||+|+.+++.|++.- ..+..+.|...... . .++.+.+. .++..+.||++++
T Consensus 12 ~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~ 91 (467)
T KOG1221|consen 12 NKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEP 91 (467)
T ss_pred CCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccCc
Confidence 5899999999999999999999853 36788888764421 0 11111111 4566788998875
Q ss_pred ------HHHHHHHccCCEEEEcc
Q 043777 65 ------KSLLEAVKQVDVRFIPS 81 (231)
Q Consensus 65 ------~~l~~al~~~d~~f~ps 81 (231)
+++....++++++++.+
T Consensus 92 ~LGis~~D~~~l~~eV~ivih~A 114 (467)
T KOG1221|consen 92 DLGISESDLRTLADEVNIVIHSA 114 (467)
T ss_pred ccCCChHHHHHHHhcCCEEEEee
Confidence 35666778899988754
No 300
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=97.40 E-value=0.00075 Score=58.34 Aligned_cols=65 Identities=22% Similarity=0.199 Sum_probs=44.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCE---EEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPK---FALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFIP 80 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v---~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~p 80 (231)
++|+|.||||++|+.+++.|.+.+|++ ..+.|..+.. +.+. .+..+...|+.+. .++++|++|..
T Consensus 2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g------~~l~~~g~~i~v~d~~~~-----~~~~vDvVf~A 70 (334)
T PRK14874 2 YNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAG------KELSFKGKELKVEDLTTF-----DFSGVDIALFS 70 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCC------CeeeeCCceeEEeeCCHH-----HHcCCCEEEEC
Confidence 589999999999999999999988764 7777764321 1111 3344555566432 34578887753
No 301
>PRK14982 acyl-ACP reductase; Provisional
Probab=97.37 E-value=0.00031 Score=60.59 Aligned_cols=69 Identities=25% Similarity=0.249 Sum_probs=46.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhC-C-CCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEY-G-HPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPS 81 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~-g-~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps 81 (231)
+++|+||||+|+||+.++++|.++ | ..++++.|+... .. .+.. ++..+++ ..+.+++.++|++++..
T Consensus 155 ~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~r---l~---~La~--el~~~~i---~~l~~~l~~aDiVv~~t 223 (340)
T PRK14982 155 KATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQER---LQ---ELQA--ELGGGKI---LSLEEALPEADIVVWVA 223 (340)
T ss_pred CCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHH---HH---HHHH--HhccccH---HhHHHHHccCCEEEECC
Confidence 579999999999999999999864 5 578888876321 11 1111 1112333 34678999999988765
Q ss_pred cC
Q 043777 82 EY 83 (231)
Q Consensus 82 ~~ 83 (231)
..
T Consensus 224 s~ 225 (340)
T PRK14982 224 SM 225 (340)
T ss_pred cC
Confidence 43
No 302
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=97.36 E-value=0.00028 Score=61.99 Aligned_cols=35 Identities=23% Similarity=0.294 Sum_probs=30.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhC-CCCEEEEEcCC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEY-GHPKFALIRDS 38 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~-g~~v~~~~R~~ 38 (231)
+++|+|.||||++|+.+++.|.+. .+++..+.++.
T Consensus 38 ~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~ 73 (381)
T PLN02968 38 KKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADR 73 (381)
T ss_pred ccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChh
Confidence 579999999999999999999988 57888888764
No 303
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=97.33 E-value=0.00097 Score=48.16 Aligned_cols=67 Identities=28% Similarity=0.373 Sum_probs=50.0
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHH-HccCCEEEEc
Q 043777 7 VLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEA-VKQVDVRFIP 80 (231)
Q Consensus 7 ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~a-l~~~d~~f~p 80 (231)
|+|+|. |.+|+.+++.|.+.+.+|+++.++.. ..+.+. .++.++.+|.+|++.+.++ +++++.+++.
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~------~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~ 69 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPE------RVEELREEGVEVIYGDATDPEVLERAGIEKADAVVIL 69 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHH------HHHHHHHTTSEEEES-TTSHHHHHHTTGGCESEEEEE
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcH------HHHHHHhcccccccccchhhhHHhhcCccccCEEEEc
Confidence 678898 89999999999997778999998742 122333 7789999999999999875 3456665543
No 304
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.15 E-value=0.0017 Score=48.58 Aligned_cols=75 Identities=23% Similarity=0.215 Sum_probs=51.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCC-EEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777 3 GKSNVLVIGAIGRIGYHFTRRSIEYGHP-KFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFIP 80 (231)
Q Consensus 3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~-v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~p 80 (231)
+.++++|.|| |..|+.++..|.+.|.. |+++.|+... ..++.+.+. ..+.+ .++ +++.+.+.++|+++..
T Consensus 11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~r--a~~l~~~~~~~~~~~--~~~---~~~~~~~~~~DivI~a 82 (135)
T PF01488_consen 11 KGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPER--AEALAEEFGGVNIEA--IPL---EDLEEALQEADIVINA 82 (135)
T ss_dssp TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHH--HHHHHHHHTGCSEEE--EEG---GGHCHHHHTESEEEE-
T ss_pred CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHH--HHHHHHHcCccccce--eeH---HHHHHHHhhCCeEEEe
Confidence 3679999998 99999999999999977 9999997431 122223332 23333 334 3344788899999876
Q ss_pred ccCCC
Q 043777 81 SEYGA 85 (231)
Q Consensus 81 s~~g~ 85 (231)
..-+.
T Consensus 83 T~~~~ 87 (135)
T PF01488_consen 83 TPSGM 87 (135)
T ss_dssp SSTTS
T ss_pred cCCCC
Confidence 65554
No 305
>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]
Probab=97.12 E-value=0.0024 Score=52.43 Aligned_cols=79 Identities=15% Similarity=0.140 Sum_probs=54.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCC-----EEEEEcCCCCch-h-hhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHP-----KFALIRDSASNF-N-FSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~-----v~~~~R~~~~~~-~-~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~ 73 (231)
.|.++|||++.++|..|+.+|++...+ +.+.+|+.++.. . +++.+.++ -.++++.+|+++-.++.+|.++
T Consensus 3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d 82 (341)
T KOG1478|consen 3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD 82 (341)
T ss_pred ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence 467899999999999999999986533 445677654311 1 12222222 3466789999999888777665
Q ss_pred -------CCEEEEccc
Q 043777 74 -------VDVRFIPSE 82 (231)
Q Consensus 74 -------~d~~f~ps~ 82 (231)
.|.+|+.+.
T Consensus 83 i~~rf~~ld~iylNAg 98 (341)
T KOG1478|consen 83 IKQRFQRLDYIYLNAG 98 (341)
T ss_pred HHHHhhhccEEEEccc
Confidence 577777544
No 306
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=97.10 E-value=0.00075 Score=55.17 Aligned_cols=60 Identities=23% Similarity=0.121 Sum_probs=45.2
Q ss_pred cCC--ChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHc
Q 043777 11 GAI--GRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVK 72 (231)
Q Consensus 11 Gat--G~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~ 72 (231)
|++ ++||+.++++|+++|++|++..|+... ..+.++.+. .+..++.+|+++++++.++++
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~--~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~ 64 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEK--LADALEELAKEYGAEVIQCDLSDEESVEALFD 64 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHH--HHHHHHHHHHHTTSEEEESCTTSHHHHHHHHH
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHH--HHHHHHHHHHHcCCceEeecCcchHHHHHHHH
Confidence 667 999999999999999999999998632 111122222 456689999999998877654
No 307
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=97.00 E-value=0.0038 Score=53.23 Aligned_cols=33 Identities=9% Similarity=0.095 Sum_probs=29.9
Q ss_pred CCeEEEEcC--CChhHHHHHHHHHhCCCCEEEEEcC
Q 043777 4 KSNVLVIGA--IGRIGYHFTRRSIEYGHPKFALIRD 37 (231)
Q Consensus 4 ~~~ilVtGa--tG~iG~~i~~~L~~~g~~v~~~~R~ 37 (231)
+|+++|||| +.+||.+++++|.++|+.|++ .|.
T Consensus 9 gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~ 43 (303)
T PLN02730 9 GKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTW 43 (303)
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeC
Confidence 688999999 799999999999999999887 554
No 308
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=96.90 E-value=0.0043 Score=55.61 Aligned_cols=73 Identities=21% Similarity=0.228 Sum_probs=55.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHH-HccCCEEEEc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEA-VKQVDVRFIP 80 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~a-l~~~d~~f~p 80 (231)
+++|+|+|+ |.+|+.+++.|.+.|++|+++.+++.. .+.+.....++.++.+|.++.+.+.++ +++++.++..
T Consensus 231 ~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~---~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~ 304 (453)
T PRK09496 231 VKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPER---AEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIAL 304 (453)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHH---HHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEEEC
Confidence 578999998 999999999999999999999887521 111111114678899999999988654 4567877654
No 309
>PLN00106 malate dehydrogenase
Probab=96.87 E-value=0.0052 Score=52.83 Aligned_cols=75 Identities=17% Similarity=0.031 Sum_probs=50.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC--CEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGH--PKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFIP 80 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~--~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~p 80 (231)
+.||+|+||+|.||+.++..|..++. ++.+++++. ....+ + .+. ........++.+.+++.++++++|++++.
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~-~~g~a--~-Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVit 93 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN-TPGVA--A-DVSHINTPAQVRGFLGDDQLGDALKGADLVIIP 93 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC-CCeeE--c-hhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEe
Confidence 46899999999999999999987663 688888765 21101 1 111 11122333555556688999999998885
Q ss_pred cc
Q 043777 81 SE 82 (231)
Q Consensus 81 s~ 82 (231)
..
T Consensus 94 AG 95 (323)
T PLN00106 94 AG 95 (323)
T ss_pred CC
Confidence 44
No 310
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.86 E-value=0.0042 Score=55.75 Aligned_cols=72 Identities=18% Similarity=0.138 Sum_probs=51.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEEccc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFIPSE 82 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~ 82 (231)
+++++|+|+++ +|..+++.|++.|++|++.+++... ...+....+. .++.++.+|..+ +...++|+++.+..
T Consensus 5 ~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~-~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~d~vv~~~g 77 (450)
T PRK14106 5 GKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEED-QLKEALEELGELGIELVLGEYPE-----EFLEGVDLVVVSPG 77 (450)
T ss_pred CCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchH-HHHHHHHHHHhcCCEEEeCCcch-----hHhhcCCEEEECCC
Confidence 68999999855 9999999999999999999886421 1111122333 577888888766 34567898877543
No 311
>KOG2774 consensus NAD dependent epimerase [General function prediction only]
Probab=96.86 E-value=0.01 Score=48.38 Aligned_cols=63 Identities=21% Similarity=0.094 Sum_probs=38.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhC-CCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEY-GHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK 72 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~-g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~ 72 (231)
..+|||||+-|++|..+++.|..+ |.+-++++--.. |.+ .....-.++..|+.|...+.+.+-
T Consensus 44 ~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~K--Pp~----~V~~~GPyIy~DILD~K~L~eIVV 107 (366)
T KOG2774|consen 44 APRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVK--PPA----NVTDVGPYIYLDILDQKSLEEIVV 107 (366)
T ss_pred CCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccC--Cch----hhcccCCchhhhhhccccHHHhhc
Confidence 468999999999999999988765 655555432111 100 111222355667777666655543
No 312
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=96.85 E-value=0.0087 Score=43.78 Aligned_cols=33 Identities=21% Similarity=0.270 Sum_probs=25.5
Q ss_pred eEEEEcCCChhHHHHHHHHHhCC-CCEE-EEEcCC
Q 043777 6 NVLVIGAIGRIGYHFTRRSIEYG-HPKF-ALIRDS 38 (231)
Q Consensus 6 ~ilVtGatG~iG~~i~~~L~~~g-~~v~-~~~R~~ 38 (231)
||.|+||||++|+.+++.|.+.. .++. +..|+.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~ 35 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSR 35 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTT
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeecc
Confidence 68999999999999999999854 3444 444444
No 313
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.85 E-value=0.0075 Score=51.93 Aligned_cols=67 Identities=27% Similarity=0.213 Sum_probs=44.6
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCC-------CEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCH-----------HHH
Q 043777 6 NVLVIGAIGRIGYHFTRRSIEYGH-------PKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDE-----------KSL 67 (231)
Q Consensus 6 ~ilVtGatG~iG~~i~~~L~~~g~-------~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~-----------~~l 67 (231)
||+|+||+|.+|+.++..|...+. ++++++++... + .......|+.|. ...
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~-~----------~~~g~~~Dl~d~~~~~~~~~~i~~~~ 70 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM-K----------ALEGVVMELQDCAFPLLKGVVITTDP 70 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc-C----------ccceeeeehhhhcccccCCcEEecCh
Confidence 799999999999999999987662 37788776410 0 011112222222 345
Q ss_pred HHHHccCCEEEEcccC
Q 043777 68 LEAVKQVDVRFIPSEY 83 (231)
Q Consensus 68 ~~al~~~d~~f~ps~~ 83 (231)
.+.++++|++.+.+..
T Consensus 71 ~~~~~~aDiVVitAG~ 86 (323)
T cd00704 71 EEAFKDVDVAILVGAF 86 (323)
T ss_pred HHHhCCCCEEEEeCCC
Confidence 7899999998886543
No 314
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=96.80 E-value=0.003 Score=54.86 Aligned_cols=33 Identities=21% Similarity=0.194 Sum_probs=28.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhC-CCCEEEEEcC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEY-GHPKFALIRD 37 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~-g~~v~~~~R~ 37 (231)
++|+|+||||.+|+.+++.|.+. ++++..+.++
T Consensus 3 ~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~ 36 (343)
T PRK00436 3 IKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSR 36 (343)
T ss_pred eEEEEECCCCHHHHHHHHHHHcCCCceEEEEECc
Confidence 79999999999999999999986 5777776664
No 315
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=96.80 E-value=0.0042 Score=53.81 Aligned_cols=64 Identities=22% Similarity=0.296 Sum_probs=42.3
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCCCEE---EEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777 6 NVLVIGAIGRIGYHFTRRSIEYGHPKF---ALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFIP 80 (231)
Q Consensus 6 ~ilVtGatG~iG~~i~~~L~~~g~~v~---~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~p 80 (231)
+|+|.||||++|+.+++.|.+++|++. .+.+..+.. +.+. .+......|+. ...++++|++|..
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g------~~~~~~~~~~~~~~~~-----~~~~~~~D~v~~a 68 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAG------RKVTFKGKELEVNEAK-----IESFEGIDIALFS 68 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCC------CeeeeCCeeEEEEeCC-----hHHhcCCCEEEEC
Confidence 589999999999999999999888754 344554321 1112 34455566664 2234778887764
No 316
>PTZ00325 malate dehydrogenase; Provisional
Probab=96.79 E-value=0.005 Score=52.93 Aligned_cols=76 Identities=16% Similarity=-0.025 Sum_probs=51.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCC--CCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777 3 GKSNVLVIGAIGRIGYHFTRRSIEYG--HPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFI 79 (231)
Q Consensus 3 ~~~~ilVtGatG~iG~~i~~~L~~~g--~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~ 79 (231)
+++||+|+|++|.||+.++..|...+ .++.++++... . .+.+ .+. ........+.+|..++.++++++|++++
T Consensus 7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~-~--g~a~-Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVi 82 (321)
T PTZ00325 7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGA-P--GVAA-DLSHIDTPAKVTGYADGELWEKALRGADLVLI 82 (321)
T ss_pred CCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCC-c--cccc-chhhcCcCceEEEecCCCchHHHhCCCCEEEE
Confidence 35699999999999999999988655 57888888321 1 1111 111 1112344566676677889999999887
Q ss_pred ccc
Q 043777 80 PSE 82 (231)
Q Consensus 80 ps~ 82 (231)
...
T Consensus 83 taG 85 (321)
T PTZ00325 83 CAG 85 (321)
T ss_pred CCC
Confidence 543
No 317
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=96.77 E-value=0.0028 Score=67.42 Aligned_cols=34 Identities=12% Similarity=0.052 Sum_probs=31.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhC-CCCEEEEEcC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEY-GHPKFALIRD 37 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~-g~~v~~~~R~ 37 (231)
.++++||||+|+||..++++|.++ |+.|+++.|+
T Consensus 1997 g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs 2031 (2582)
T TIGR02813 1997 DDVFLVTGGAKGVTFECALELAKQCQAHFILAGRS 2031 (2582)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 578999999999999999999998 5899999997
No 318
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=96.76 E-value=0.0047 Score=49.45 Aligned_cols=66 Identities=15% Similarity=0.081 Sum_probs=43.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP 80 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p 80 (231)
|++.| ||+|.||+.++++|.+.||+|.+-.|+..... ....+.+... -...+..++.+.+|++|+.
T Consensus 2 ~~~~i-~GtGniG~alA~~~a~ag~eV~igs~r~~~~~-~a~a~~l~~~--------i~~~~~~dA~~~aDVVvLA 67 (211)
T COG2085 2 MIIAI-IGTGNIGSALALRLAKAGHEVIIGSSRGPKAL-AAAAAALGPL--------ITGGSNEDAAALADVVVLA 67 (211)
T ss_pred cEEEE-eccChHHHHHHHHHHhCCCeEEEecCCChhHH-HHHHHhhccc--------cccCChHHHHhcCCEEEEe
Confidence 45555 66799999999999999999999877653211 1111121121 1233456788889998875
No 319
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=96.70 E-value=0.0056 Score=56.63 Aligned_cols=68 Identities=16% Similarity=0.292 Sum_probs=53.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHH-HccCCEEEE
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEA-VKQVDVRFI 79 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~a-l~~~d~~f~ 79 (231)
.+++|+|+ |.+|+.+++.|.++|++++++++++. +. +... .++.++.+|.+|++.++++ ++++|.+++
T Consensus 418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~---~~---~~~~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv 487 (558)
T PRK10669 418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRT---RV---DELRERGIRAVLGNAANEEIMQLAHLDCARWLLL 487 (558)
T ss_pred CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHH---HH---HHHHHCCCeEEEcCCCCHHHHHhcCccccCEEEE
Confidence 46899998 99999999999999999999987642 12 2223 6889999999999988765 355776554
No 320
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=96.63 E-value=0.0031 Score=51.12 Aligned_cols=34 Identities=24% Similarity=0.287 Sum_probs=31.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
|+|.|+||+|.+|+.++..|.+.|++|.+..|+.
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~ 34 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDL 34 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCH
Confidence 5799999999999999999999999999998875
No 321
>KOG2733 consensus Uncharacterized membrane protein [Function unknown]
Probab=96.62 E-value=0.0029 Score=54.27 Aligned_cols=70 Identities=23% Similarity=0.160 Sum_probs=51.7
Q ss_pred eEEEEcCCChhHHHHHHHHHh----CCCCEEEEEcCCCCchhhhhhhhhc-------CCcEEEEEcCCCHHHHHHHHccC
Q 043777 6 NVLVIGAIGRIGYHFTRRSIE----YGHPKFALIRDSASNFNFSLLRVFH-------SGVFDYWGLLEDEKSLLEAVKQV 74 (231)
Q Consensus 6 ~ilVtGatG~iG~~i~~~L~~----~g~~v~~~~R~~~~~~~~~~~~~~~-------~~v~~~~~D~~d~~~l~~al~~~ 74 (231)
-++|.|||||.|..+++++++ .+...-+..|+..+ ..+.++... +...++.+|.+|++++.+..+.+
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~K--L~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~ 84 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKK--LQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQA 84 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHH--HHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhh
Confidence 588999999999999999999 57777788887543 011111111 22337889999999999999987
Q ss_pred CEE
Q 043777 75 DVR 77 (231)
Q Consensus 75 d~~ 77 (231)
.++
T Consensus 85 ~vi 87 (423)
T KOG2733|consen 85 RVI 87 (423)
T ss_pred EEE
Confidence 763
No 322
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=96.59 E-value=0.025 Score=43.56 Aligned_cols=62 Identities=23% Similarity=0.240 Sum_probs=42.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFI 79 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~ 79 (231)
+|+|.++|- |..|+.+++.|+++|++|++..|+... . +.+. .++.. .++..++++++|+++.
T Consensus 1 m~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~---~---~~~~~~g~~~-------~~s~~e~~~~~dvvi~ 63 (163)
T PF03446_consen 1 MMKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEK---A---EALAEAGAEV-------ADSPAEAAEQADVVIL 63 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHH---H---HHHHHTTEEE-------ESSHHHHHHHBSEEEE
T ss_pred CCEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhh---h---hhhHHhhhhh-------hhhhhhHhhcccceEe
Confidence 358999997 999999999999999999999987421 1 2222 44222 2245566777888774
No 323
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=96.59 E-value=0.011 Score=50.02 Aligned_cols=68 Identities=18% Similarity=0.077 Sum_probs=52.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh-cCCcEEEEEcCCCHHHHHHHHcc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF-HSGVFDYWGLLEDEKSLLEAVKQ 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~-~~~v~~~~~D~~d~~~l~~al~~ 73 (231)
.+-|+|||+=.+.|+.++++|.++|+.|.+-.-.+.. ..++.... .++...++.|+++++++.++.+-
T Consensus 29 ~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~g--ae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~ 97 (322)
T KOG1610|consen 29 DKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEG--AESLRGETKSPRLRTLQLDVTKPESVKEAAQW 97 (322)
T ss_pred CcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCch--HHHHhhhhcCCcceeEeeccCCHHHHHHHHHH
Confidence 4679999999999999999999999999987744321 11222222 26778889999999999888763
No 324
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=96.55 E-value=0.013 Score=50.42 Aligned_cols=67 Identities=24% Similarity=0.152 Sum_probs=45.0
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCC-------CEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHH-----------HH
Q 043777 6 NVLVIGAIGRIGYHFTRRSIEYGH-------PKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEK-----------SL 67 (231)
Q Consensus 6 ~ilVtGatG~iG~~i~~~L~~~g~-------~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~-----------~l 67 (231)
+|+|+||+|.+|+.++..|...+. ++++++++.... .......|+.|.. ..
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~-----------~a~g~~~Dl~d~~~~~~~~~~~~~~~ 69 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK-----------VLEGVVMELMDCAFPLLDGVVPTHDP 69 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc-----------ccceeEeehhcccchhcCceeccCCh
Confidence 589999999999999999988653 478888754310 0111223333322 44
Q ss_pred HHHHccCCEEEEcccC
Q 043777 68 LEAVKQVDVRFIPSEY 83 (231)
Q Consensus 68 ~~al~~~d~~f~ps~~ 83 (231)
.+.++++|++++....
T Consensus 70 ~~~~~~aDiVVitAG~ 85 (324)
T TIGR01758 70 AVAFTDVDVAILVGAF 85 (324)
T ss_pred HHHhCCCCEEEEcCCC
Confidence 6788999998886544
No 325
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=96.44 E-value=0.011 Score=55.28 Aligned_cols=68 Identities=22% Similarity=0.301 Sum_probs=54.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHH-HccCCEEEE
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEA-VKQVDVRFI 79 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~a-l~~~d~~f~ 79 (231)
++|+|+|. |.+|+.+++.|.++|++++++++++. ..+... .+..++.+|.++++.++++ +++++.+.+
T Consensus 401 ~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~------~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~ 470 (601)
T PRK03659 401 PQVIIVGF-GRFGQVIGRLLMANKMRITVLERDIS------AVNLMRKYGYKVYYGDATQLELLRAAGAEKAEAIVI 470 (601)
T ss_pred CCEEEecC-chHHHHHHHHHHhCCCCEEEEECCHH------HHHHHHhCCCeEEEeeCCCHHHHHhcCCccCCEEEE
Confidence 57999997 99999999999999999999998742 122233 6788999999999999876 456776554
No 326
>PRK05086 malate dehydrogenase; Provisional
Probab=96.42 E-value=0.011 Score=50.59 Aligned_cols=73 Identities=18% Similarity=0.109 Sum_probs=45.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHh-C--CCCEEEEEcCCCCchhhhhhhhhcC-C-cEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIE-Y--GHPKFALIRDSASNFNFSLLRVFHS-G-VFDYWGLLEDEKSLLEAVKQVDVRFI 79 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~-~--g~~v~~~~R~~~~~~~~~~~~~~~~-~-v~~~~~D~~d~~~l~~al~~~d~~f~ 79 (231)
|||+|+||||.+|++++..|.. . ++.+.++.|+.... ...+ .+.. + ...+.+ .+.+++.+.++++|++++
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~--g~al-Dl~~~~~~~~i~~--~~~~d~~~~l~~~DiVIi 75 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTP--GVAV-DLSHIPTAVKIKG--FSGEDPTPALEGADVVLI 75 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCc--ceeh-hhhcCCCCceEEE--eCCCCHHHHcCCCCEEEE
Confidence 6899999999999999988854 2 35677777764211 0001 1111 1 123333 234456678899999887
Q ss_pred ccc
Q 043777 80 PSE 82 (231)
Q Consensus 80 ps~ 82 (231)
...
T Consensus 76 taG 78 (312)
T PRK05086 76 SAG 78 (312)
T ss_pred cCC
Confidence 543
No 327
>PRK05442 malate dehydrogenase; Provisional
Probab=96.40 E-value=0.018 Score=49.63 Aligned_cols=76 Identities=25% Similarity=0.191 Sum_probs=47.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-------CEEEEEcCCCCc-h---hhhhhhhh-c--CCcEEEEEcCCCHHH
Q 043777 1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGH-------PKFALIRDSASN-F---NFSLLRVF-H--SGVFDYWGLLEDEKS 66 (231)
Q Consensus 1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~-------~v~~~~R~~~~~-~---~~~~~~~~-~--~~v~~~~~D~~d~~~ 66 (231)
|.+++||.|+||+|.+|+.++-.|+..+. ++.+++++.... . ..++.... . ..+.+ + ..
T Consensus 1 ~~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i-----~--~~ 73 (326)
T PRK05442 1 MKAPVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVI-----T--DD 73 (326)
T ss_pred CCCCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEE-----e--cC
Confidence 78889999999999999999998887663 577777753210 1 11111110 1 11221 1 13
Q ss_pred HHHHHccCCEEEEcccC
Q 043777 67 LLEAVKQVDVRFIPSEY 83 (231)
Q Consensus 67 l~~al~~~d~~f~ps~~ 83 (231)
..+.++++|++++....
T Consensus 74 ~y~~~~daDiVVitaG~ 90 (326)
T PRK05442 74 PNVAFKDADVALLVGAR 90 (326)
T ss_pred hHHHhCCCCEEEEeCCC
Confidence 35788999998886543
No 328
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=96.38 E-value=0.016 Score=56.94 Aligned_cols=72 Identities=22% Similarity=0.077 Sum_probs=52.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC-CC-------------EEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHH
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYG-HP-------------KFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLE 69 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g-~~-------------v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~ 69 (231)
+++|+|.|| |++|+.+++.|.+.. ++ |.+.+++.. .++.+.....++..+..|+.|.+++.+
T Consensus 569 ~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~---~a~~la~~~~~~~~v~lDv~D~e~L~~ 644 (1042)
T PLN02819 569 SQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLK---DAKETVEGIENAEAVQLDVSDSESLLK 644 (1042)
T ss_pred CCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHH---HHHHHHHhcCCCceEEeecCCHHHHHH
Confidence 568999998 999999999998753 33 555554431 121111111467789999999999999
Q ss_pred HHccCCEEEE
Q 043777 70 AVKQVDVRFI 79 (231)
Q Consensus 70 al~~~d~~f~ 79 (231)
+++++|++..
T Consensus 645 ~v~~~DaVIs 654 (1042)
T PLN02819 645 YVSQVDVVIS 654 (1042)
T ss_pred hhcCCCEEEE
Confidence 9999999775
No 329
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=96.33 E-value=0.021 Score=49.66 Aligned_cols=29 Identities=21% Similarity=0.423 Sum_probs=25.6
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCCE
Q 043777 3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPK 31 (231)
Q Consensus 3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v 31 (231)
++++|+|.||||++|+.+++.|.+++|++
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~ 34 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPY 34 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCCc
Confidence 35799999999999999999999888753
No 330
>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed
Probab=96.31 E-value=0.019 Score=50.32 Aligned_cols=65 Identities=22% Similarity=0.183 Sum_probs=50.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEE
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVR 77 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~ 77 (231)
++|+|.|+ |++|+.++.++.+.|+.|.+++.+... + +. .+ . -..+.+|+.|.+.+.+.++.+|++
T Consensus 3 ~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~-p-a~---~~-a-d~~~~~~~~D~~~l~~~a~~~dvi 67 (372)
T PRK06019 3 KTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDS-P-AA---QV-A-DEVIVADYDDVAALRELAEQCDVI 67 (372)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCC-c-hh---Hh-C-ceEEecCCCCHHHHHHHHhcCCEE
Confidence 58999998 899999999999999999999876431 1 11 11 1 135567999999999999999974
No 331
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=96.31 E-value=0.014 Score=54.74 Aligned_cols=68 Identities=21% Similarity=0.257 Sum_probs=53.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHH-HccCCEEEE
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEA-VKQVDVRFI 79 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~a-l~~~d~~f~ 79 (231)
.+|+|+|. |.+|+.+++.|.++|++++++..++. ..+... .+..++.+|.+|++.+.++ +++++.+.+
T Consensus 401 ~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~------~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv 470 (621)
T PRK03562 401 PRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPD------HIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLIN 470 (621)
T ss_pred CcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHH------HHHHHHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEE
Confidence 57999998 99999999999999999999988742 122233 6789999999999988764 345666554
No 332
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=96.28 E-value=0.021 Score=45.11 Aligned_cols=69 Identities=16% Similarity=0.220 Sum_probs=43.8
Q ss_pred CCeEEEEcC----------------CChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHH
Q 043777 4 KSNVLVIGA----------------IGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSL 67 (231)
Q Consensus 4 ~~~ilVtGa----------------tG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l 67 (231)
+++||||+| ||..|.+|++++..+|++|+.+..+.+.. .+.++..+. +...+++
T Consensus 3 gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~--------~p~~~~~i~--v~sa~em 72 (185)
T PF04127_consen 3 GKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSLP--------PPPGVKVIR--VESAEEM 72 (185)
T ss_dssp T-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS------------TTEEEEE---SSHHHH
T ss_pred CCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcccc--------ccccceEEE--ecchhhh
Confidence 578888865 79999999999999999999998874211 124555554 4455554
Q ss_pred ----HHHHccCCEEEEccc
Q 043777 68 ----LEAVKQVDVRFIPSE 82 (231)
Q Consensus 68 ----~~al~~~d~~f~ps~ 82 (231)
.+.++++|+.++.+.
T Consensus 73 ~~~~~~~~~~~Di~I~aAA 91 (185)
T PF04127_consen 73 LEAVKELLPSADIIIMAAA 91 (185)
T ss_dssp HHHHHHHGGGGSEEEE-SB
T ss_pred hhhhccccCcceeEEEecc
Confidence 444556898887543
No 333
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=96.23 E-value=0.028 Score=37.73 Aligned_cols=34 Identities=29% Similarity=0.408 Sum_probs=30.7
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC
Q 043777 6 NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS 40 (231)
Q Consensus 6 ~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~ 40 (231)
+++|.|| |++|-.++..|.+.|.+|+++.|.+..
T Consensus 1 ~vvViGg-G~ig~E~A~~l~~~g~~vtli~~~~~~ 34 (80)
T PF00070_consen 1 RVVVIGG-GFIGIELAEALAELGKEVTLIERSDRL 34 (80)
T ss_dssp EEEEESS-SHHHHHHHHHHHHTTSEEEEEESSSSS
T ss_pred CEEEECc-CHHHHHHHHHHHHhCcEEEEEeccchh
Confidence 5889998 999999999999999999999997643
No 334
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=96.22 E-value=0.025 Score=49.92 Aligned_cols=67 Identities=13% Similarity=0.167 Sum_probs=48.4
Q ss_pred CCeEEEEcC----------------CChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHH
Q 043777 4 KSNVLVIGA----------------IGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSL 67 (231)
Q Consensus 4 ~~~ilVtGa----------------tG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l 67 (231)
+++++|||| ||.+|..++++|..+|++|+++.++... ..+.+ +...|+.+.+++
T Consensus 185 ~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~--------~~~~~--~~~~~v~~~~~~ 254 (390)
T TIGR00521 185 GKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSL--------LTPPG--VKSIKVSTAEEM 254 (390)
T ss_pred CceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCcc--------CCCCC--cEEEEeccHHHH
Confidence 578999998 4679999999999999999998876531 11122 245788888887
Q ss_pred -HHHH----ccCCEEEEc
Q 043777 68 -LEAV----KQVDVRFIP 80 (231)
Q Consensus 68 -~~al----~~~d~~f~p 80 (231)
..++ .++|+.+..
T Consensus 255 ~~~~~~~~~~~~D~~i~~ 272 (390)
T TIGR00521 255 LEAALNELAKDFDIFISA 272 (390)
T ss_pred HHHHHHhhcccCCEEEEc
Confidence 4444 246776654
No 335
>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=96.17 E-value=0.016 Score=49.59 Aligned_cols=72 Identities=22% Similarity=0.183 Sum_probs=49.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEE-----EEcCCCHHHHHHHHccCCEEE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDY-----WGLLEDEKSLLEAVKQVDVRF 78 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~-----~~D~~d~~~l~~al~~~d~~f 78 (231)
+++|.|.|| |-.|.+|+..|.++||+|+++.|++.. .+.+..-..+.+++ ...+.-..++.++++++|.++
T Consensus 1 ~~kI~ViGa-GswGTALA~~la~ng~~V~lw~r~~~~---~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~iv 76 (329)
T COG0240 1 MMKIAVIGA-GSWGTALAKVLARNGHEVRLWGRDEEI---VAEINETRENPKYLPGILLPPNLKATTDLAEALDGADIIV 76 (329)
T ss_pred CceEEEEcC-ChHHHHHHHHHHhcCCeeEEEecCHHH---HHHHHhcCcCccccCCccCCcccccccCHHHHHhcCCEEE
Confidence 368999998 999999999999999999999997532 11111111122222 233444567899999999866
Q ss_pred E
Q 043777 79 I 79 (231)
Q Consensus 79 ~ 79 (231)
+
T Consensus 77 ~ 77 (329)
T COG0240 77 I 77 (329)
T ss_pred E
Confidence 4
No 336
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=96.15 E-value=0.0087 Score=52.10 Aligned_cols=37 Identities=27% Similarity=0.301 Sum_probs=30.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCC
Q 043777 1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDS 38 (231)
Q Consensus 1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~ 38 (231)
|+ +++|+|+||||++|+.+++.|.+... +++.+.++.
T Consensus 1 ~~-~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~ 38 (349)
T PRK08664 1 MM-KLKVGILGATGMVGQRFVQLLANHPWFEVTALAASE 38 (349)
T ss_pred CC-CcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcCh
Confidence 55 58999999999999999999997654 777774543
No 337
>PRK06849 hypothetical protein; Provisional
Probab=96.11 E-value=0.01 Score=52.26 Aligned_cols=38 Identities=24% Similarity=0.207 Sum_probs=35.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
|.++|+|||||++..+|..+++.|.+.|++|++++...
T Consensus 1 ~~~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~ 38 (389)
T PRK06849 1 MNTKKTVLITGARAPAALELARLFHNAGHTVILADSLK 38 (389)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 77789999999999999999999999999999988764
No 338
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.11 E-value=0.04 Score=44.14 Aligned_cols=34 Identities=15% Similarity=0.366 Sum_probs=30.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
+++|+|+|| |.+|...++.|++.|++|+++.+..
T Consensus 10 ~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~ 43 (202)
T PRK06718 10 NKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL 43 (202)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 689999998 9999999999999999999987653
No 339
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=96.08 E-value=0.043 Score=47.59 Aligned_cols=75 Identities=25% Similarity=0.233 Sum_probs=51.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCC------------------chhh----hhhhhhcCCc--EEEE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSAS------------------NFNF----SLLRVFHSGV--FDYW 58 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~------------------~~~~----~~~~~~~~~v--~~~~ 58 (231)
.++|+|.|+ |.+|+++++.|...|. .+++++++.-. .+|+ +.+..+.+.+ ..+.
T Consensus 24 ~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~ 102 (338)
T PRK12475 24 EKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVV 102 (338)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEe
Confidence 578999998 8899999999999996 68888876411 0111 2222333333 4455
Q ss_pred EcCCCHHHHHHHHccCCEEEEc
Q 043777 59 GLLEDEKSLLEAVKQVDVRFIP 80 (231)
Q Consensus 59 ~D~~d~~~l~~al~~~d~~f~p 80 (231)
.|++ .+.+.++++++|+++..
T Consensus 103 ~~~~-~~~~~~~~~~~DlVid~ 123 (338)
T PRK12475 103 TDVT-VEELEELVKEVDLIIDA 123 (338)
T ss_pred ccCC-HHHHHHHhcCCCEEEEc
Confidence 6664 55788889999987754
No 340
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=96.07 E-value=0.013 Score=50.99 Aligned_cols=33 Identities=21% Similarity=0.167 Sum_probs=26.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHhC-CCCEEEE-EcC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEY-GHPKFAL-IRD 37 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~-g~~v~~~-~R~ 37 (231)
|+|+|+||||++|+.+++.|.+. ++++..+ +++
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~ 35 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSR 35 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccc
Confidence 57999999999999999999976 4667744 443
No 341
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.07 E-value=0.029 Score=47.13 Aligned_cols=36 Identities=19% Similarity=0.210 Sum_probs=30.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCC----CCEEEEEcCC
Q 043777 1 MAGKSNVLVIGAIGRIGYHFTRRSIEYG----HPKFALIRDS 38 (231)
Q Consensus 1 M~~~~~ilVtGatG~iG~~i~~~L~~~g----~~v~~~~R~~ 38 (231)
|+ .|+|.++|+ |.+|+.+++.|++.| ++|++..|+.
T Consensus 1 ~~-~mkI~~IG~-G~mG~aia~~l~~~g~~~~~~v~v~~r~~ 40 (279)
T PRK07679 1 MS-IQNISFLGA-GSIAEAIIGGLLHANVVKGEQITVSNRSN 40 (279)
T ss_pred CC-CCEEEEECc-cHHHHHHHHHHHHCCCCCcceEEEECCCC
Confidence 66 579999995 999999999999988 7788887754
No 342
>PRK10537 voltage-gated potassium channel; Provisional
Probab=96.02 E-value=0.031 Score=49.43 Aligned_cols=68 Identities=10% Similarity=0.018 Sum_probs=51.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHH-HccCCEEEE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEA-VKQVDVRFI 79 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~a-l~~~d~~f~ 79 (231)
+.+++|+|. |.+|+.+++.|.++|++++++..+.. . .....+..++.+|.+|++.++++ +++++.+.+
T Consensus 240 k~HvII~G~-g~lg~~v~~~L~~~g~~vvVId~d~~----~---~~~~~g~~vI~GD~td~e~L~~AgI~~A~aVI~ 308 (393)
T PRK10537 240 KDHFIICGH-SPLAINTYLGLRQRGQAVTVIVPLGL----E---HRLPDDADLIPGDSSDSAVLKKAGAARARAILA 308 (393)
T ss_pred CCeEEEECC-ChHHHHHHHHHHHCCCCEEEEECchh----h---hhccCCCcEEEeCCCCHHHHHhcCcccCCEEEE
Confidence 457999997 88999999999999999988875421 1 12226788999999999988765 355676654
No 343
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=96.01 E-value=0.011 Score=48.29 Aligned_cols=60 Identities=12% Similarity=0.095 Sum_probs=40.3
Q ss_pred CCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCEEEEccc
Q 043777 12 AIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDVRFIPSE 82 (231)
Q Consensus 12 atG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~~f~ps~ 82 (231)
+||++|++++++|.++|+.|+++.|.... .. .. ...+|+.+.+++.++++ .+|+.++.+.
T Consensus 23 SSGgIG~AIA~~la~~Ga~Vvlv~~~~~l-------~~--~~--~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAg 89 (227)
T TIGR02114 23 STGHLGKIITETFLSAGHEVTLVTTKRAL-------KP--EP--HPNLSIREIETTKDLLITLKELVQEHDILIHSMA 89 (227)
T ss_pred cccHHHHHHHHHHHHCCCEEEEEcChhhc-------cc--cc--CCcceeecHHHHHHHHHHHHHHcCCCCEEEECCE
Confidence 48999999999999999999988764210 00 01 13468888776655433 4677766543
No 344
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=95.99 E-value=0.041 Score=44.20 Aligned_cols=66 Identities=14% Similarity=0.167 Sum_probs=48.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQVDVRFIP 80 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~~d~~f~p 80 (231)
+++|+|.|| |.+|..-++.|++.|..|++++.+.. + .+..+. .++.++..++.. + -+.+++.++..
T Consensus 9 gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~--~---~l~~l~~~~~i~~~~~~~~~-~----dl~~~~lVi~a 76 (205)
T TIGR01470 9 GRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE--S---ELTLLAEQGGITWLARCFDA-D----ILEGAFLVIAA 76 (205)
T ss_pred CCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC--H---HHHHHHHcCCEEEEeCCCCH-H----HhCCcEEEEEC
Confidence 679999998 99999999999999999999876542 1 112222 467888888762 2 25677777765
No 345
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=95.87 E-value=0.041 Score=38.14 Aligned_cols=64 Identities=25% Similarity=0.343 Sum_probs=41.2
Q ss_pred eEEEEcCCChhHHHHHHHHHhCC---CCEEEE-EcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777 6 NVLVIGAIGRIGYHFTRRSIEYG---HPKFAL-IRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP 80 (231)
Q Consensus 6 ~ilVtGatG~iG~~i~~~L~~~g---~~v~~~-~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p 80 (231)
||.++|+ |.+|+.|++.|++.| ++|.+. .|++.. ..+..+. .++.+... +..++++.+|++|+.
T Consensus 1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~--~~~~~~~--~~~~~~~~------~~~~~~~~advvila 68 (96)
T PF03807_consen 1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSPEK--AAELAKE--YGVQATAD------DNEEAAQEADVVILA 68 (96)
T ss_dssp EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSHHH--HHHHHHH--CTTEEESE------EHHHHHHHTSEEEE-
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcHHH--HHHHHHh--hccccccC------ChHHhhccCCEEEEE
Confidence 5788865 999999999999999 888865 665421 1111112 33333322 245666789998874
No 346
>PRK04148 hypothetical protein; Provisional
Probab=95.85 E-value=0.021 Score=42.63 Aligned_cols=65 Identities=12% Similarity=0.220 Sum_probs=47.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRF 78 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f 78 (231)
++++++.|. | -|.+++..|.+.|++|++++.++.. .+... .++.++.+|+.+++- +.-+++|.++
T Consensus 17 ~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~a------V~~a~~~~~~~v~dDlf~p~~--~~y~~a~liy 82 (134)
T PRK04148 17 NKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKA------VEKAKKLGLNAFVDDLFNPNL--EIYKNAKLIY 82 (134)
T ss_pred CCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHH------HHHHHHhCCeEEECcCCCCCH--HHHhcCCEEE
Confidence 468999997 6 7888999999999999999987521 12222 567899999987762 2345677665
No 347
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=95.78 E-value=0.042 Score=41.54 Aligned_cols=71 Identities=18% Similarity=0.132 Sum_probs=45.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEccc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSE 82 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~ 82 (231)
.++++|+|+ |.+|+.+++.|.+.| +.|.++.|+... ..+..+.+. ...+..+..+. .++++++|+++....
T Consensus 19 ~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~--~~~~~~~~~--~~~~~~~~~~~---~~~~~~~Dvvi~~~~ 90 (155)
T cd01065 19 GKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEK--AKALAERFG--ELGIAIAYLDL---EELLAEADLIINTTP 90 (155)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHH--HHHHHHHHh--hcccceeecch---hhccccCCEEEeCcC
Confidence 578999998 999999999999986 788888886421 111112221 11122233333 334788999887433
No 348
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.74 E-value=0.016 Score=49.35 Aligned_cols=34 Identities=12% Similarity=0.072 Sum_probs=30.1
Q ss_pred CCeEEEEcCC--ChhHHHHHHHHHhCCCCEEEEEcC
Q 043777 4 KSNVLVIGAI--GRIGYHFTRRSIEYGHPKFALIRD 37 (231)
Q Consensus 4 ~~~ilVtGat--G~iG~~i~~~L~~~g~~v~~~~R~ 37 (231)
+|+++||||+ .+||++++++|.++|++|++.+|.
T Consensus 8 gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~ 43 (299)
T PRK06300 8 GKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWV 43 (299)
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEecc
Confidence 6789999995 899999999999999999887643
No 349
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=95.73 E-value=0.032 Score=48.06 Aligned_cols=77 Identities=19% Similarity=0.114 Sum_probs=45.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-------CEEEEEcCCCCc-hhhhhhhhhcCCcEEE--EEcCCCHHHHHHHHcc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGH-------PKFALIRDSASN-FNFSLLRVFHSGVFDY--WGLLEDEKSLLEAVKQ 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~-------~v~~~~R~~~~~-~~~~~~~~~~~~v~~~--~~D~~d~~~l~~al~~ 73 (231)
.+||.|+||+|.+|+.++..|+..|. ++.+++++.... .+...+ .+......+ ...+. ....+.+++
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~-Dl~~~~~~~~~~~~i~--~~~~~~~~d 78 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAM-ELEDCAFPLLAEIVIT--DDPNVAFKD 78 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeeh-hhhhccccccCceEEe--cCcHHHhCC
Confidence 57999999999999999999998774 577887743221 111000 111000000 00111 123578899
Q ss_pred CCEEEEcccC
Q 043777 74 VDVRFIPSEY 83 (231)
Q Consensus 74 ~d~~f~ps~~ 83 (231)
+|++++....
T Consensus 79 aDivvitaG~ 88 (322)
T cd01338 79 ADWALLVGAK 88 (322)
T ss_pred CCEEEEeCCC
Confidence 9999886554
No 350
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=95.72 E-value=0.028 Score=48.00 Aligned_cols=33 Identities=27% Similarity=0.349 Sum_probs=30.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
|+|.|.|+ |.+|..++..|.+.|++|.++.|+.
T Consensus 2 mkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~ 34 (325)
T PRK00094 2 MKIAVLGA-GSWGTALAIVLARNGHDVTLWARDP 34 (325)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCH
Confidence 58999997 9999999999999999999999864
No 351
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=95.65 E-value=0.069 Score=45.21 Aligned_cols=66 Identities=29% Similarity=0.423 Sum_probs=47.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP 80 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p 80 (231)
.++++|+|+ |.+|+.+++.|...|.+|++..|+... ... ....+...+ +.+.+.+.++++|+++..
T Consensus 151 gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~---~~~--~~~~g~~~~-----~~~~l~~~l~~aDiVint 216 (287)
T TIGR02853 151 GSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSAD---LAR--ITEMGLIPF-----PLNKLEEKVAEIDIVINT 216 (287)
T ss_pred CCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHH---HHH--HHHCCCeee-----cHHHHHHHhccCCEEEEC
Confidence 578999998 899999999999999999999987421 111 111233221 345677888999998864
No 352
>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated
Probab=95.64 E-value=0.079 Score=46.64 Aligned_cols=68 Identities=15% Similarity=0.148 Sum_probs=50.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc--cCCEEEE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK--QVDVRFI 79 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~--~~d~~f~ 79 (231)
+|+|+|+|+ |..|+.++.++.+.|+.|.+++.++.. +.. .+.. ..+..|..|.+.+.++++ ++|.++.
T Consensus 12 ~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~-~~~----~~ad--~~~~~~~~d~~~l~~~~~~~~id~vi~ 81 (395)
T PRK09288 12 ATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANA-PAM----QVAH--RSHVIDMLDGDALRAVIEREKPDYIVP 81 (395)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCC-chH----Hhhh--heEECCCCCHHHHHHHHHHhCCCEEEE
Confidence 568999997 899999999999999999988876531 100 0111 245678889999988888 6887654
No 353
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=95.59 E-value=0.018 Score=50.57 Aligned_cols=35 Identities=23% Similarity=0.332 Sum_probs=32.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
.++|+|.||.|.+|+.++..|.+.|++|++.+|+.
T Consensus 98 ~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~ 132 (374)
T PRK11199 98 LRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDD 132 (374)
T ss_pred cceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence 47899999999999999999999999999998853
No 354
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=95.56 E-value=0.024 Score=48.78 Aligned_cols=37 Identities=27% Similarity=0.286 Sum_probs=33.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
|+..|+|.|.|+ |-+|..++..|.+.|++|+++.|+.
T Consensus 1 ~~~~m~I~iIG~-G~mG~~ia~~L~~~G~~V~~~~r~~ 37 (328)
T PRK14618 1 MHHGMRVAVLGA-GAWGTALAVLAASKGVPVRLWARRP 37 (328)
T ss_pred CCCCCeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 666789999987 9999999999999999999999964
No 355
>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]
Probab=95.55 E-value=0.06 Score=46.67 Aligned_cols=64 Identities=19% Similarity=0.199 Sum_probs=50.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCE
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDV 76 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~ 76 (231)
++|.|.|| |++|+-++.+-...|+.+.++.-+.. .|..+ .--..+..+++|.+.+.++.+.||+
T Consensus 2 ~tvgIlGG-GQLgrMm~~aa~~lG~~v~vLdp~~~-~PA~~------va~~~i~~~~dD~~al~ela~~~DV 65 (375)
T COG0026 2 KTVGILGG-GQLGRMMALAAARLGIKVIVLDPDAD-APAAQ------VADRVIVAAYDDPEALRELAAKCDV 65 (375)
T ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCEEEEecCCCC-Cchhh------cccceeecCCCCHHHHHHHHhhCCE
Confidence 58999998 99999999999999999999875442 12111 1124567888999999999999998
No 356
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=95.53 E-value=0.022 Score=49.25 Aligned_cols=37 Identities=27% Similarity=0.420 Sum_probs=29.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCC---EEEEEcC
Q 043777 1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHP---KFALIRD 37 (231)
Q Consensus 1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~---v~~~~R~ 37 (231)
|.++++|.|.||||++|+.+++.|.+..|+ +..+...
T Consensus 1 ~~~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~ 40 (336)
T PRK08040 1 MSEGWNIALLGATGAVGEALLELLAERQFPVGELYALASE 40 (336)
T ss_pred CCCCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEcc
Confidence 777899999999999999999999886544 4445443
No 357
>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]
Probab=95.53 E-value=0.03 Score=46.85 Aligned_cols=68 Identities=19% Similarity=0.146 Sum_probs=46.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhC--CCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHcc
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEY--GHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQ 73 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~--g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~ 73 (231)
++++||||+||||++.+..+... .+..+.+..-.-... .+.++... ++.+++.+|+.+...+...+..
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~-~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~ 78 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN-LKNLEPVRNSPNYKFVEGDIADADLVLYLFET 78 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc-cchhhhhccCCCceEeeccccchHHHHhhhcc
Confidence 68999999999999999999876 345554443211111 12222332 7788999999998887776653
No 358
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=95.52 E-value=0.034 Score=47.77 Aligned_cols=32 Identities=19% Similarity=0.138 Sum_probs=25.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALI 35 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~ 35 (231)
++||.|.||+|+.|..|++.|.... .++...+
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~s 34 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAGHPDVELILIS 34 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhcCCCeEEEEee
Confidence 4799999999999999999998875 4544443
No 359
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.48 E-value=0.12 Score=44.84 Aligned_cols=75 Identities=24% Similarity=0.179 Sum_probs=49.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCC------------------chh----hhhhhhhcCC--cEEEE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSAS------------------NFN----FSLLRVFHSG--VFDYW 58 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~------------------~~~----~~~~~~~~~~--v~~~~ 58 (231)
..+|+|.|+ |++|+.++..|...|. ++++++++.-. .+| .+.++.+.+. +..+.
T Consensus 24 ~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~~ 102 (339)
T PRK07688 24 EKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAIV 102 (339)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEEe
Confidence 468999998 9999999999999996 78888876311 011 1122223233 33445
Q ss_pred EcCCCHHHHHHHHccCCEEEEc
Q 043777 59 GLLEDEKSLLEAVKQVDVRFIP 80 (231)
Q Consensus 59 ~D~~d~~~l~~al~~~d~~f~p 80 (231)
.+++ .+.+.+.++++|+++..
T Consensus 103 ~~~~-~~~~~~~~~~~DlVid~ 123 (339)
T PRK07688 103 QDVT-AEELEELVTGVDLIIDA 123 (339)
T ss_pred ccCC-HHHHHHHHcCCCEEEEc
Confidence 5664 45667778888886644
No 360
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=95.47 E-value=0.028 Score=48.07 Aligned_cols=34 Identities=24% Similarity=0.369 Sum_probs=31.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
+|+|+|.|+ |-+|..++..|.+.|++|+++.|+.
T Consensus 5 ~m~I~IiG~-GaiG~~lA~~L~~~g~~V~~~~r~~ 38 (313)
T PRK06249 5 TPRIGIIGT-GAIGGFYGAMLARAGFDVHFLLRSD 38 (313)
T ss_pred CcEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCC
Confidence 579999987 9999999999999999999999975
No 361
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.47 E-value=0.029 Score=47.47 Aligned_cols=37 Identities=24% Similarity=0.207 Sum_probs=33.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
|.+.++|.|+|+ |.+|..++..|+.+|++|++++|+.
T Consensus 1 ~~~~~kI~vIGa-G~mG~~iA~~la~~G~~V~l~d~~~ 37 (292)
T PRK07530 1 MMAIKKVGVIGA-GQMGNGIAHVCALAGYDVLLNDVSA 37 (292)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 666789999998 9999999999999999999999875
No 362
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=95.45 E-value=0.092 Score=46.12 Aligned_cols=72 Identities=18% Similarity=0.176 Sum_probs=51.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPS 81 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps 81 (231)
..+++|+|+ |.+|+..++.|...|.+|.+++|+.. +.+.+... -+. .+..+..+.+.+.++++++|+++...
T Consensus 167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~---~~~~l~~~-~g~-~v~~~~~~~~~l~~~l~~aDvVI~a~ 238 (370)
T TIGR00518 167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDINID---RLRQLDAE-FGG-RIHTRYSNAYEIEDAVKRADLLIGAV 238 (370)
T ss_pred CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHH---HHHHHHHh-cCc-eeEeccCCHHHHHHHHccCCEEEEcc
Confidence 457999987 99999999999999999999988642 11111111 111 23446677888999999999988643
No 363
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed
Probab=95.45 E-value=0.073 Score=43.60 Aligned_cols=67 Identities=21% Similarity=0.258 Sum_probs=41.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC---C-EEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHccC
Q 043777 1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGH---P-KFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQV 74 (231)
Q Consensus 1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~---~-v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~~ 74 (231)
|++.++|.|+|+ |.+|+.++..|++.|. . +.+..|+... +. +.+. .++... .| ..++++++
T Consensus 1 ~m~~~kI~iIG~-G~mg~ala~~l~~~~~~~~~~i~~~~~~~~~--~~---~~~~~~~~~~~~----~~---~~~~~~~~ 67 (245)
T PRK07634 1 MLKKHRILFIGA-GRMAEAIFSGLLKTSKEYIEEIIVSNRSNVE--KL---DQLQARYNVSTT----TD---WKQHVTSV 67 (245)
T ss_pred CCCCCeEEEECc-CHHHHHHHHHHHhCCCCCcCeEEEECCCCHH--HH---HHHHHHcCcEEe----CC---hHHHHhcC
Confidence 666789999996 9999999999998873 2 4455554211 11 1221 233221 12 34556789
Q ss_pred CEEEEc
Q 043777 75 DVRFIP 80 (231)
Q Consensus 75 d~~f~p 80 (231)
|++++.
T Consensus 68 DiViia 73 (245)
T PRK07634 68 DTIVLA 73 (245)
T ss_pred CEEEEe
Confidence 998864
No 364
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.45 E-value=0.029 Score=47.83 Aligned_cols=37 Identities=22% Similarity=0.205 Sum_probs=33.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
|++.++|.|.|+ |.+|..++..|++.|++|+++.++.
T Consensus 1 ~~~~~~I~vIGa-G~mG~~iA~~l~~~g~~V~~~d~~~ 37 (311)
T PRK06130 1 MNPIQNLAIIGA-GTMGSGIAALFARKGLQVVLIDVME 37 (311)
T ss_pred CCCccEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCH
Confidence 777789999997 9999999999999999999998865
No 365
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=95.43 E-value=0.034 Score=41.88 Aligned_cols=74 Identities=19% Similarity=0.107 Sum_probs=45.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC--CCEEEEEcCCCCch-hhhhhhhhc--CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYG--HPKFALIRDSASNF-NFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQVDVRFI 79 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g--~~v~~~~R~~~~~~-~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~~d~~f~ 79 (231)
|||.|+||+|.+|++++..|...+ .++++++++..... .+..+.+.. ......... .+ .+.++++|++.+
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~-~~----~~~~~~aDivvi 75 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS-GD----YEALKDADIVVI 75 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE-SS----GGGGTTESEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc-cc----ccccccccEEEE
Confidence 689999999999999999999887 45888888742200 111111211 222222111 23 346788999887
Q ss_pred cccC
Q 043777 80 PSEY 83 (231)
Q Consensus 80 ps~~ 83 (231)
....
T Consensus 76 tag~ 79 (141)
T PF00056_consen 76 TAGV 79 (141)
T ss_dssp TTST
T ss_pred eccc
Confidence 5543
No 366
>PRK06444 prephenate dehydrogenase; Provisional
Probab=95.42 E-value=0.021 Score=45.65 Aligned_cols=28 Identities=21% Similarity=0.305 Sum_probs=26.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEE
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKF 32 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~ 32 (231)
|++.|+||+|.+|+.+++.|.+.|+.|.
T Consensus 1 ~~~~iiG~~G~mG~~~~~~~~~~g~~v~ 28 (197)
T PRK06444 1 MMEIIIGKNGRLGRVLCSILDDNGLGVY 28 (197)
T ss_pred CEEEEEecCCcHHHHHHHHHHhCCCEEE
Confidence 5899999999999999999999999886
No 367
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=95.41 E-value=0.076 Score=45.73 Aligned_cols=80 Identities=21% Similarity=0.188 Sum_probs=46.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-------CEEEEEcCCCCc-hhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccC
Q 043777 3 GKSNVLVIGAIGRIGYHFTRRSIEYGH-------PKFALIRDSASN-FNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQV 74 (231)
Q Consensus 3 ~~~~ilVtGatG~iG~~i~~~L~~~g~-------~v~~~~R~~~~~-~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~ 74 (231)
++.||.|+||+|++|++++..|+..+. ++.+++++.... .+...+ .+.........+..-.....+.++++
T Consensus 2 ~p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~-Dl~~~~~~~~~~~~i~~~~~~~~~da 80 (323)
T TIGR01759 2 KPVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAM-ELEDCAFPLLAGVVATTDPEEAFKDV 80 (323)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHH-HHhhccccccCCcEEecChHHHhCCC
Confidence 356899999999999999999998873 577777753210 111111 11110000000110012345788999
Q ss_pred CEEEEcccC
Q 043777 75 DVRFIPSEY 83 (231)
Q Consensus 75 d~~f~ps~~ 83 (231)
|++.+....
T Consensus 81 DvVVitAG~ 89 (323)
T TIGR01759 81 DAALLVGAF 89 (323)
T ss_pred CEEEEeCCC
Confidence 998886544
No 368
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=95.40 E-value=0.03 Score=47.47 Aligned_cols=37 Identities=30% Similarity=0.384 Sum_probs=33.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
|.+.++|.|.|+ |.+|..|+..|+..|++|++..++.
T Consensus 1 ~~~~~~V~vIG~-G~mG~~iA~~l~~~G~~V~~~d~~~ 37 (295)
T PLN02545 1 MAEIKKVGVVGA-GQMGSGIAQLAAAAGMDVWLLDSDP 37 (295)
T ss_pred CCCcCEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCH
Confidence 776789999998 9999999999999999999998875
No 369
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=95.40 E-value=0.069 Score=45.39 Aligned_cols=65 Identities=18% Similarity=0.315 Sum_probs=45.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFI 79 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ 79 (231)
|+|.|+|. |.+|..+++.|.+.|++|.+..|+... .+.+.. .++.. ..+.+++.+.++.+|++++
T Consensus 1 M~Ig~IGl-G~mG~~la~~L~~~g~~V~~~dr~~~~---~~~l~~--~g~~~----~~s~~~~~~~~~~~dvIi~ 65 (298)
T TIGR00872 1 MQLGLIGL-GRMGANIVRRLAKRGHDCVGYDHDQDA---VKAMKE--DRTTG----VANLRELSQRLSAPRVVWV 65 (298)
T ss_pred CEEEEEcc-hHHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHH--cCCcc----cCCHHHHHhhcCCCCEEEE
Confidence 47999996 999999999999999999999887531 111111 22221 2355666666777888775
No 370
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=95.37 E-value=0.081 Score=40.78 Aligned_cols=65 Identities=23% Similarity=0.267 Sum_probs=42.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777 2 AGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP 80 (231)
Q Consensus 2 ~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p 80 (231)
...++++|+|- |.+|+.+++.|...|..|++..+++ ...++..-.+.++. .+.++++.+|+.+..
T Consensus 21 l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DP-----i~alqA~~dGf~v~--------~~~~a~~~adi~vta 85 (162)
T PF00670_consen 21 LAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDP-----IRALQAAMDGFEVM--------TLEEALRDADIFVTA 85 (162)
T ss_dssp -TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSH-----HHHHHHHHTT-EEE---------HHHHTTT-SEEEE-
T ss_pred eCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECCh-----HHHHHhhhcCcEec--------CHHHHHhhCCEEEEC
Confidence 34688999998 9999999999999999999988764 22223333666654 267788888876643
No 371
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=95.34 E-value=0.067 Score=45.22 Aligned_cols=33 Identities=21% Similarity=0.307 Sum_probs=30.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
|+|.|.|. |.+|+.+++.|.+.|++|.+..|+.
T Consensus 3 ~~IgviG~-G~mG~~~a~~l~~~g~~v~~~d~~~ 35 (296)
T PRK11559 3 MKVGFIGL-GIMGKPMSKNLLKAGYSLVVYDRNP 35 (296)
T ss_pred ceEEEEcc-CHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 68999996 9999999999999999999988864
No 372
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=95.34 E-value=0.026 Score=48.65 Aligned_cols=33 Identities=27% Similarity=0.350 Sum_probs=30.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
|+|.|.|+ |.+|..++..|.+.|++|++++|+.
T Consensus 3 mkI~IiG~-G~mG~~~A~~L~~~G~~V~~~~r~~ 35 (341)
T PRK08229 3 ARICVLGA-GSIGCYLGGRLAAAGADVTLIGRAR 35 (341)
T ss_pred ceEEEECC-CHHHHHHHHHHHhcCCcEEEEecHH
Confidence 78999997 9999999999999999999999853
No 373
>PRK08655 prephenate dehydrogenase; Provisional
Probab=95.32 E-value=0.026 Score=50.64 Aligned_cols=34 Identities=29% Similarity=0.412 Sum_probs=31.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
|+|+|+||+|.+|+.+++.|.+.|++|.+++|+.
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~ 34 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDP 34 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECCh
Confidence 5799999999999999999999999999999875
No 374
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=95.21 E-value=0.065 Score=44.56 Aligned_cols=34 Identities=12% Similarity=0.133 Sum_probs=29.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC---CCEEEEEcCC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYG---HPKFALIRDS 38 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g---~~v~~~~R~~ 38 (231)
+|+|.|+|+ |.+|+.++..|.+.| +.|.++.|+.
T Consensus 2 mm~I~iIG~-G~mG~~la~~l~~~g~~~~~v~v~~r~~ 38 (267)
T PRK11880 2 MKKIGFIGG-GNMASAIIGGLLASGVPAKDIIVSDPSP 38 (267)
T ss_pred CCEEEEEec-hHHHHHHHHHHHhCCCCcceEEEEcCCH
Confidence 378999997 999999999999998 6788888864
No 375
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=95.20 E-value=0.034 Score=47.49 Aligned_cols=34 Identities=26% Similarity=0.274 Sum_probs=31.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
.|+|.|+| +|.+|..++..|+++|++|++++|+.
T Consensus 2 ~~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~ 35 (308)
T PRK06129 2 MGSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADP 35 (308)
T ss_pred CcEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCH
Confidence 35899999 59999999999999999999999875
No 376
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=95.13 E-value=0.12 Score=44.91 Aligned_cols=69 Identities=20% Similarity=0.152 Sum_probs=45.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc----cCCEEE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK----QVDVRF 78 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~----~~d~~f 78 (231)
+++|||.||+|.+|++.++-+...| ..|++..+..+ .++.+.+. +. ...|+.+++-.+...+ ++|+++
T Consensus 158 g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~----~~l~k~lG--Ad-~vvdy~~~~~~e~~kk~~~~~~DvVl 230 (347)
T KOG1198|consen 158 GKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEK----LELVKKLG--AD-EVVDYKDENVVELIKKYTGKGVDVVL 230 (347)
T ss_pred CCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccch----HHHHHHcC--Cc-EeecCCCHHHHHHHHhhcCCCccEEE
Confidence 5689999999999999999888888 44444443331 23333433 22 3458888666665555 478776
Q ss_pred E
Q 043777 79 I 79 (231)
Q Consensus 79 ~ 79 (231)
-
T Consensus 231 D 231 (347)
T KOG1198|consen 231 D 231 (347)
T ss_pred E
Confidence 4
No 377
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=95.13 E-value=0.13 Score=43.73 Aligned_cols=66 Identities=30% Similarity=0.401 Sum_probs=48.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP 80 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p 80 (231)
.++++|+|+ |.+|+.++..|...|.+|++..|+... .+.... .++..+ +.+.+.+.++++|++|..
T Consensus 152 g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~---~~~~~~--~G~~~~-----~~~~l~~~l~~aDiVI~t 217 (296)
T PRK08306 152 GSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAH---LARITE--MGLSPF-----HLSELAEEVGKIDIIFNT 217 (296)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHH--cCCeee-----cHHHHHHHhCCCCEEEEC
Confidence 579999997 889999999999999999999987421 111111 344332 335677888999998864
No 378
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=95.10 E-value=0.042 Score=42.21 Aligned_cols=31 Identities=23% Similarity=0.337 Sum_probs=28.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALI 35 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~ 35 (231)
+++|+|.|| |.+|...++.|++.|++|++++
T Consensus 13 ~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs 43 (157)
T PRK06719 13 NKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS 43 (157)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc
Confidence 679999998 9999999999999999999885
No 379
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=95.03 E-value=0.22 Score=39.79 Aligned_cols=75 Identities=21% Similarity=0.181 Sum_probs=48.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCC----------------chhh----hhhhhhcCCcEE--EEEc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSAS----------------NFNF----SLLRVFHSGVFD--YWGL 60 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~----------------~~~~----~~~~~~~~~v~~--~~~D 60 (231)
..+|+|.|+ |.+|+.+++.|...|. ++++++++.-. .+|+ +.+..+.+.+++ +...
T Consensus 21 ~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~ 99 (202)
T TIGR02356 21 NSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKER 99 (202)
T ss_pred CCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhc
Confidence 568999997 8999999999999995 78888776211 0111 112222234443 3333
Q ss_pred CCCHHHHHHHHccCCEEEEc
Q 043777 61 LEDEKSLLEAVKQVDVRFIP 80 (231)
Q Consensus 61 ~~d~~~l~~al~~~d~~f~p 80 (231)
+ +.+.+.+.++++|+++..
T Consensus 100 i-~~~~~~~~~~~~D~Vi~~ 118 (202)
T TIGR02356 100 V-TAENLELLINNVDLVLDC 118 (202)
T ss_pred C-CHHHHHHHHhCCCEEEEC
Confidence 4 445677888889987754
No 380
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=95.00 E-value=0.36 Score=41.42 Aligned_cols=72 Identities=17% Similarity=0.241 Sum_probs=45.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC--CEEEEEcCCCC-ch-hhhhhhhhc--CCcEEEEEcCCCHHHHHHHHccCCEE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGH--PKFALIRDSAS-NF-NFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQVDVR 77 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~--~v~~~~R~~~~-~~-~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~~d~~ 77 (231)
.+||.|+|+ |.+|+.++..|...|. ++.+++++... .. ..++..... ..+.+. . .+ .+.++++|++
T Consensus 6 ~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~----~~~~~~adiv 77 (315)
T PRK00066 6 HNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GD----YSDCKDADLV 77 (315)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CC----HHHhCCCCEE
Confidence 479999998 9999999999998886 68888886532 11 111111111 122222 2 22 3457899998
Q ss_pred EEcccC
Q 043777 78 FIPSEY 83 (231)
Q Consensus 78 f~ps~~ 83 (231)
.+....
T Consensus 78 Iitag~ 83 (315)
T PRK00066 78 VITAGA 83 (315)
T ss_pred EEecCC
Confidence 876544
No 381
>PLN02948 phosphoribosylaminoimidazole carboxylase
Probab=94.98 E-value=0.15 Score=47.54 Aligned_cols=68 Identities=19% Similarity=0.186 Sum_probs=51.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFI 79 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ 79 (231)
.++|+|.|+ |++|+.++.++.+.|++|.+++.+.. .+.. .+ .. ..+.+++.|.+.+.++.+.+|++..
T Consensus 22 ~k~IgIIGg-Gqlg~mla~aA~~lG~~Vi~ld~~~~-apa~----~~-AD-~~~v~~~~D~~~l~~~a~~~dvIt~ 89 (577)
T PLN02948 22 ETVVGVLGG-GQLGRMLCQAASQMGIKVKVLDPLED-CPAS----SV-AA-RHVVGSFDDRAAVREFAKRCDVLTV 89 (577)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCC-Cchh----hh-Cc-eeeeCCCCCHHHHHHHHHHCCEEEE
Confidence 578999998 89999999999999999999987643 1100 11 11 2445789999999988888888643
No 382
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=94.97 E-value=0.048 Score=46.69 Aligned_cols=34 Identities=24% Similarity=0.177 Sum_probs=30.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCC--EEEEEcCC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHP--KFALIRDS 38 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~--v~~~~R~~ 38 (231)
|||.|+||||.+|..++..|+..|+. |++++|+.
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~ 36 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPK 36 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcc
Confidence 68999999999999999999999865 88889854
No 383
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=94.96 E-value=0.068 Score=45.72 Aligned_cols=71 Identities=18% Similarity=0.026 Sum_probs=48.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFI 79 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ 79 (231)
..++|.||+||.|..++++|.+.|..-.+..|+..+ ...+... -+...-..++-+++.+.+.+.+++++..
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~k--l~~l~~~--LG~~~~~~p~~~p~~~~~~~~~~~VVln 77 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAK--LDALRAS--LGPEAAVFPLGVPAALEAMASRTQVVLN 77 (382)
T ss_pred eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHH--HHHHHHh--cCccccccCCCCHHHHHHHHhcceEEEe
Confidence 468999999999999999999999888777776421 0111112 2233333344458888888888887553
No 384
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=94.92 E-value=0.095 Score=43.60 Aligned_cols=32 Identities=25% Similarity=0.262 Sum_probs=26.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhC-CCCEEEEEc
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEY-GHPKFALIR 36 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~-g~~v~~~~R 36 (231)
++|+|+|++|.+|+.+++.+.+. +.++..+..
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d 34 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVD 34 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence 68999999999999999988874 577766443
No 385
>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2. This enzyme is an alternative to PurN (TIGR00639)
Probab=94.88 E-value=0.16 Score=44.41 Aligned_cols=66 Identities=18% Similarity=0.211 Sum_probs=49.7
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc--cCCEEEE
Q 043777 6 NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK--QVDVRFI 79 (231)
Q Consensus 6 ~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~--~~d~~f~ 79 (231)
||+|.|+ |..|..++.++.+.|+.|++++.+... +.. .+ .. ..+.+|+.|.+.+.+.++ ++|.++.
T Consensus 1 kililG~-g~~~~~l~~aa~~~G~~v~~~d~~~~~-~~~----~~-ad-~~~~~~~~d~~~l~~~~~~~~id~v~~ 68 (380)
T TIGR01142 1 RVLLLGS-GELGKEVAIEAQRLGVEVIAVDRYANA-PAM----QV-AH-RSYVINMLDGDALRAVIEREKPDYIVP 68 (380)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCC-chh----hh-Cc-eEEEcCCCCHHHHHHHHHHhCCCEEEe
Confidence 5899996 999999999999999999999886532 101 11 11 345678899999988887 5887654
No 386
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=94.87 E-value=0.044 Score=49.98 Aligned_cols=38 Identities=21% Similarity=0.175 Sum_probs=33.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777 1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA 39 (231)
Q Consensus 1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~ 39 (231)
|.+.|+|.|+|+ |.+|+.++..|++.|++|++.+|+..
T Consensus 1 ~~~i~kIavIG~-G~MG~~iA~~la~~G~~V~v~D~~~~ 38 (495)
T PRK07531 1 MTMIMKAACIGG-GVIGGGWAARFLLAGIDVAVFDPHPE 38 (495)
T ss_pred CCCcCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 666689999986 99999999999999999999998753
No 387
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=94.87 E-value=0.11 Score=45.37 Aligned_cols=32 Identities=19% Similarity=0.222 Sum_probs=24.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHhC-CCC---EEEEEc
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEY-GHP---KFALIR 36 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~-g~~---v~~~~R 36 (231)
++|.|.||||.+|+.+++.|++. ..+ +..++.
T Consensus 2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss 37 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFST 37 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecc
Confidence 58999999999999999966654 565 555444
No 388
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=94.86 E-value=0.05 Score=43.54 Aligned_cols=34 Identities=24% Similarity=0.397 Sum_probs=30.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
.|+|+|+|. |.+|+++++.|.+.|++|++.+++.
T Consensus 28 gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~ 61 (200)
T cd01075 28 GKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINE 61 (200)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 578999998 8999999999999999999887653
No 389
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=94.76 E-value=0.054 Score=45.55 Aligned_cols=34 Identities=18% Similarity=0.263 Sum_probs=30.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcCC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRDS 38 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~ 38 (231)
.++++|+|+ |.+|+.++.+|...| .+|+++.|+.
T Consensus 123 ~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~ 157 (278)
T PRK00258 123 GKRILILGA-GGAARAVILPLLDLGVAEITIVNRTV 157 (278)
T ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 468999997 999999999999999 7899999975
No 390
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=94.75 E-value=0.058 Score=46.01 Aligned_cols=33 Identities=27% Similarity=0.451 Sum_probs=30.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
|+|+|.|+ |-||..+.-.|.+.|++|+++.|..
T Consensus 3 m~I~IiGa-GaiG~~~a~~L~~~G~~V~lv~r~~ 35 (305)
T PRK05708 3 MTWHILGA-GSLGSLWACRLARAGLPVRLILRDR 35 (305)
T ss_pred ceEEEECC-CHHHHHHHHHHHhCCCCeEEEEech
Confidence 78999998 9999999999999999999999964
No 391
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=94.71 E-value=0.055 Score=39.79 Aligned_cols=34 Identities=29% Similarity=0.413 Sum_probs=28.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHh-CCCCEE-EEEcCC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIE-YGHPKF-ALIRDS 38 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~-~g~~v~-~~~R~~ 38 (231)
|+|+|.|++|.+|+.+++.+.+ .++++. ++.|+.
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~ 36 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKP 36 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCC
Confidence 5899999999999999999999 577755 455554
No 392
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=94.68 E-value=0.061 Score=45.90 Aligned_cols=36 Identities=22% Similarity=0.309 Sum_probs=32.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777 3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA 39 (231)
Q Consensus 3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~ 39 (231)
..|+|.|.|+ |.+|+.++..|.++|++|+++.|+..
T Consensus 3 ~~m~I~iiG~-G~~G~~lA~~l~~~G~~V~~~~r~~~ 38 (308)
T PRK14619 3 QPKTIAILGA-GAWGSTLAGLASANGHRVRVWSRRSG 38 (308)
T ss_pred CCCEEEEECc-cHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 3689999987 99999999999999999999999764
No 393
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=94.67 E-value=0.057 Score=48.03 Aligned_cols=33 Identities=24% Similarity=0.368 Sum_probs=30.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
|+|.|.|. |.+|..++..|.+.|++|+++.|+.
T Consensus 1 mkI~vIGl-G~~G~~lA~~La~~G~~V~~~d~~~ 33 (411)
T TIGR03026 1 MKIAVIGL-GYVGLPLAALLADLGHEVTGVDIDQ 33 (411)
T ss_pred CEEEEECC-CchhHHHHHHHHhcCCeEEEEECCH
Confidence 47999986 9999999999999999999999875
No 394
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=94.64 E-value=0.28 Score=41.60 Aligned_cols=81 Identities=14% Similarity=0.087 Sum_probs=49.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCCchhhh-hhhhhc--CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSASNFNFS-LLRVFH--SGVFDYWGLLEDEKSLLEAVKQVDVRFI 79 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~~~~~~-~~~~~~--~~v~~~~~D~~d~~~l~~al~~~d~~f~ 79 (231)
.++++|.|| |+.+++++..|...|. +++++.|+.....+++ +.+.+. .+..+...++.+.+.+.+.+.++|++..
T Consensus 124 ~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDivIN 202 (288)
T PRK12749 124 GKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTN 202 (288)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEEEE
Confidence 468999998 7789999999999885 7889999743101122 222222 1111222333333345566777888776
Q ss_pred cccCCC
Q 043777 80 PSEYGA 85 (231)
Q Consensus 80 ps~~g~ 85 (231)
.+..|.
T Consensus 203 aTp~Gm 208 (288)
T PRK12749 203 GTKVGM 208 (288)
T ss_pred CCCCCC
Confidence 555554
No 395
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.63 E-value=0.066 Score=45.27 Aligned_cols=38 Identities=21% Similarity=0.307 Sum_probs=33.1
Q ss_pred CCCC-CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777 1 MAGK-SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA 39 (231)
Q Consensus 1 M~~~-~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~ 39 (231)
|++. ++|.|.|+ |.+|+.++..|+..|++|+++++++.
T Consensus 1 ~~~~~~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~ 39 (286)
T PRK07819 1 MSDAIQRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEE 39 (286)
T ss_pred CCCCccEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHH
Confidence 4443 58999998 99999999999999999999999764
No 396
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=94.57 E-value=0.21 Score=42.83 Aligned_cols=74 Identities=22% Similarity=0.046 Sum_probs=44.8
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCC--CEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEccc
Q 043777 6 NVLVIGAIGRIGYHFTRRSIEYGH--PKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSE 82 (231)
Q Consensus 6 ~ilVtGatG~iG~~i~~~L~~~g~--~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~ 82 (231)
||.|+||+|.+|++++-.|...+. ++.+++++. ....+..+.+......+.... +.+++.++++++|++++...
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~-a~g~a~DL~~~~~~~~i~~~~--~~~~~~~~~~daDivvitaG 76 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG-AAGVAADLSHIPTAASVKGFS--GEEGLENALKGADVVVIPAG 76 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC-CcEEEchhhcCCcCceEEEec--CCCchHHHcCCCCEEEEeCC
Confidence 589999999999999999988874 577777765 211111111111112222111 11235678999999887544
No 397
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=94.55 E-value=0.059 Score=45.54 Aligned_cols=33 Identities=27% Similarity=0.413 Sum_probs=30.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
|+|+|.|+ |.+|..++..|.+.|++|+++.|+.
T Consensus 1 m~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~r~~ 33 (304)
T PRK06522 1 MKIAILGA-GAIGGLFGAALAQAGHDVTLVARRG 33 (304)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCh
Confidence 57999998 9999999999999999999999964
No 398
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=94.49 E-value=0.13 Score=43.73 Aligned_cols=33 Identities=18% Similarity=0.360 Sum_probs=30.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
++|.|+|. |.+|..++..|++.|++|+++.|+.
T Consensus 2 ~~Ig~IGl-G~mG~~mA~~l~~~G~~V~v~d~~~ 34 (296)
T PRK15461 2 AAIAFIGL-GQMGSPMASNLLKQGHQLQVFDVNP 34 (296)
T ss_pred CeEEEEee-CHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 47999986 9999999999999999999998875
No 399
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=94.46 E-value=0.047 Score=41.84 Aligned_cols=70 Identities=23% Similarity=0.300 Sum_probs=44.3
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhh------hcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777 6 NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRV------FHSGVFDYWGLLEDEKSLLEAVKQVDVRFI 79 (231)
Q Consensus 6 ~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~------~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ 79 (231)
||.|.|| |..|.+++..|..+|++|.++.|+... .+.++. +..++..- ..+.=..++.++++++|++++
T Consensus 1 KI~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~~~---~~~i~~~~~n~~~~~~~~l~-~~i~~t~dl~~a~~~ad~Iii 75 (157)
T PF01210_consen 1 KIAVIGA-GNWGTALAALLADNGHEVTLWGRDEEQ---IEEINETRQNPKYLPGIKLP-ENIKATTDLEEALEDADIIII 75 (157)
T ss_dssp EEEEESS-SHHHHHHHHHHHHCTEEEEEETSCHHH---HHHHHHHTSETTTSTTSBEE-TTEEEESSHHHHHTT-SEEEE
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCEEEEEeccHHH---HHHHHHhCCCCCCCCCcccC-cccccccCHHHHhCcccEEEe
Confidence 6899998 999999999999999999999997521 111111 00222211 011112456788999999776
Q ss_pred c
Q 043777 80 P 80 (231)
Q Consensus 80 p 80 (231)
.
T Consensus 76 a 76 (157)
T PF01210_consen 76 A 76 (157)
T ss_dssp -
T ss_pred c
Confidence 3
No 400
>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]
Probab=94.44 E-value=0.09 Score=43.97 Aligned_cols=77 Identities=21% Similarity=0.135 Sum_probs=47.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC-Cch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA-SNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPS 81 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~-~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps 81 (231)
.-||.|.||+|+||+.+.- |++....|.-+.--.- ..+ -+..+.+... +.....++-.+.+.++++++|++.+|.
T Consensus 28 ~~KVAvlGAaGGIGQPLSL-LlK~np~Vs~LaLYDi~~~~GVaaDlSHI~T--~s~V~g~~g~~~L~~al~~advVvIPA 104 (345)
T KOG1494|consen 28 GLKVAVLGAAGGIGQPLSL-LLKLNPLVSELALYDIANTPGVAADLSHINT--NSSVVGFTGADGLENALKGADVVVIPA 104 (345)
T ss_pred cceEEEEecCCccCccHHH-HHhcCcccceeeeeecccCCcccccccccCC--CCceeccCChhHHHHHhcCCCEEEecC
Confidence 4589999999999999864 5566655543322110 011 1111112111 123345666789999999999999987
Q ss_pred cC
Q 043777 82 EY 83 (231)
Q Consensus 82 ~~ 83 (231)
..
T Consensus 105 GV 106 (345)
T KOG1494|consen 105 GV 106 (345)
T ss_pred CC
Confidence 54
No 401
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=94.44 E-value=0.28 Score=38.32 Aligned_cols=32 Identities=22% Similarity=0.148 Sum_probs=27.5
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCC
Q 043777 6 NVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDS 38 (231)
Q Consensus 6 ~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~ 38 (231)
+|+|.|+ |.+|+.+++.|...|. ++++++.+.
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 5899997 8999999999999996 488887764
No 402
>PLN02688 pyrroline-5-carboxylate reductase
Probab=94.41 E-value=0.17 Score=42.04 Aligned_cols=32 Identities=19% Similarity=0.169 Sum_probs=27.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCC----CEEEE-EcC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGH----PKFAL-IRD 37 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~----~v~~~-~R~ 37 (231)
|+|.++| .|.+|+.+++.|++.|+ ++++. .|+
T Consensus 1 ~kI~~IG-~G~mG~a~a~~L~~~g~~~~~~i~v~~~r~ 37 (266)
T PLN02688 1 FRVGFIG-AGKMAEAIARGLVASGVVPPSRISTADDSN 37 (266)
T ss_pred CeEEEEC-CcHHHHHHHHHHHHCCCCCcceEEEEeCCC
Confidence 5799999 59999999999999998 77777 554
No 403
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=94.41 E-value=0.23 Score=42.20 Aligned_cols=33 Identities=30% Similarity=0.491 Sum_probs=29.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
|+|.|+|. |.+|+.+++.|++.|++|.+..|+.
T Consensus 1 m~Ig~IGl-G~MG~~mA~~L~~~g~~v~v~dr~~ 33 (301)
T PRK09599 1 MQLGMIGL-GRMGGNMARRLLRGGHEVVGYDRNP 33 (301)
T ss_pred CEEEEEcc-cHHHHHHHHHHHHCCCeEEEEECCH
Confidence 47999985 9999999999999999999998874
No 404
>TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein. Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, N5-carboxyaminoimidazole ribonucleotide synthetase, which hydrolyzes ATP and converts AIR to N5-CAIR. PurE converts N5-CAIR to CAIR. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP.
Probab=94.36 E-value=0.16 Score=44.09 Aligned_cols=64 Identities=19% Similarity=0.175 Sum_probs=48.5
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEE
Q 043777 6 NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVR 77 (231)
Q Consensus 6 ~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~ 77 (231)
+|.|.|+ |++|+.++.++.+.|+.|++++.++.. + +. .+ .. ..+.+++.|.+.+.+..+.+|++
T Consensus 1 ~igiiG~-gql~~~l~~aa~~lG~~v~~~d~~~~~-p-~~---~~-ad-~~~~~~~~d~~~i~~~a~~~dvi 64 (352)
T TIGR01161 1 TVGILGG-GQLGRMLALAARPLGIKVHVLDPDANS-P-AV---QV-AD-HVVLAPFFDPAAIRELAESCDVI 64 (352)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCEEEEECCCCCC-C-hh---Hh-Cc-eeEeCCCCCHHHHHHHHhhCCEE
Confidence 4789998 899999999999999999999775421 1 10 11 11 23467899999999999888874
No 405
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=94.32 E-value=0.073 Score=41.82 Aligned_cols=33 Identities=27% Similarity=0.261 Sum_probs=28.5
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777 6 NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA 39 (231)
Q Consensus 6 ~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~ 39 (231)
+|.|.|| |.+|+.|+..++..|++|++.+++..
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~ 33 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPE 33 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHH
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChH
Confidence 6899998 99999999999999999999998753
No 406
>PRK08163 salicylate hydroxylase; Provisional
Probab=94.29 E-value=0.09 Score=46.14 Aligned_cols=38 Identities=21% Similarity=0.190 Sum_probs=34.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777 1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA 39 (231)
Q Consensus 1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~ 39 (231)
|+++++|+|+|| |-.|..++..|.+.|++|+++-|...
T Consensus 1 ~~~~~~V~IvGa-GiaGl~~A~~L~~~g~~v~v~Er~~~ 38 (396)
T PRK08163 1 MTKVTPVLIVGG-GIGGLAAALALARQGIKVKLLEQAAE 38 (396)
T ss_pred CCCCCeEEEECC-cHHHHHHHHHHHhCCCcEEEEeeCcc
Confidence 787889999998 99999999999999999999998753
No 407
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=94.27 E-value=0.067 Score=47.69 Aligned_cols=36 Identities=19% Similarity=0.188 Sum_probs=32.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
|. .|+|.|+|. |++|..++..|.+.|++|++++|+.
T Consensus 1 m~-~~kI~VIGl-G~~G~~~A~~La~~G~~V~~~D~~~ 36 (415)
T PRK11064 1 MS-FETISVIGL-GYIGLPTAAAFASRQKQVIGVDINQ 36 (415)
T ss_pred CC-ccEEEEECc-chhhHHHHHHHHhCCCEEEEEeCCH
Confidence 66 588999986 9999999999999999999999875
No 408
>PRK12409 D-amino acid dehydrogenase small subunit; Provisional
Probab=94.22 E-value=0.085 Score=46.63 Aligned_cols=33 Identities=27% Similarity=0.274 Sum_probs=30.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
.+|+|+|| |.+|..++.+|.++|++|.++.|..
T Consensus 2 ~~vvIIGa-G~~G~~~A~~La~~g~~V~vle~~~ 34 (410)
T PRK12409 2 SHIAVIGA-GITGVTTAYALAQRGYQVTVFDRHR 34 (410)
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 38999998 9999999999999999999999874
No 409
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=94.19 E-value=0.058 Score=38.26 Aligned_cols=34 Identities=24% Similarity=0.325 Sum_probs=30.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcC
Q 043777 3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRD 37 (231)
Q Consensus 3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~ 37 (231)
++++|+|+|| |.+|.+=++.|++.|.+|++++..
T Consensus 6 ~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~ 39 (103)
T PF13241_consen 6 KGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPE 39 (103)
T ss_dssp TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCc
Confidence 3679999998 999999999999999999999875
No 410
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=94.17 E-value=0.36 Score=38.99 Aligned_cols=33 Identities=24% Similarity=0.206 Sum_probs=28.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCC-EEEEEcC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHP-KFALIRD 37 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~-v~~~~R~ 37 (231)
..+|+|.|+ |.+|+.++..|...|.. +++++.+
T Consensus 28 ~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 28 KAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred CCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 468999997 89999999999999964 7777766
No 411
>PRK06847 hypothetical protein; Provisional
Probab=94.13 E-value=0.1 Score=45.35 Aligned_cols=37 Identities=24% Similarity=0.194 Sum_probs=34.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
|+++++|+|+|| |-.|..++..|.+.|++|+++-|..
T Consensus 1 m~~~~~V~IVGa-G~aGl~~A~~L~~~g~~v~v~E~~~ 37 (375)
T PRK06847 1 MAAVKKVLIVGG-GIGGLSAAIALRRAGIAVDLVEIDP 37 (375)
T ss_pred CCCcceEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence 888889999998 9999999999999999999998865
No 412
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=94.10 E-value=0.086 Score=44.61 Aligned_cols=31 Identities=35% Similarity=0.554 Sum_probs=29.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEc
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIR 36 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R 36 (231)
|+|+|.|+ |.+|..++..|.+.|++|+++.|
T Consensus 1 mkI~IiG~-G~iG~~~a~~L~~~g~~V~~~~r 31 (305)
T PRK12921 1 MRIAVVGA-GAVGGTFGGRLLEAGRDVTFLVR 31 (305)
T ss_pred CeEEEECC-CHHHHHHHHHHHHCCCceEEEec
Confidence 57999997 99999999999999999999999
No 413
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=94.08 E-value=0.34 Score=39.50 Aligned_cols=78 Identities=9% Similarity=0.063 Sum_probs=54.6
Q ss_pred CCeEEEEcCC--ChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc-----
Q 043777 4 KSNVLVIGAI--GRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ----- 73 (231)
Q Consensus 4 ~~~ilVtGat--G~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~----- 73 (231)
.|++||+|-. ..|+-.|++.|.++|.++........- .+.++.+. ....+++||+++.+++...+..
T Consensus 6 GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l---~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~ 82 (259)
T COG0623 6 GKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERL---EKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKW 82 (259)
T ss_pred CceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHH---HHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhh
Confidence 7899999976 479999999999999998777665311 11122221 2235689999999998887764
Q ss_pred --CCEEEEcccCC
Q 043777 74 --VDVRFIPSEYG 84 (231)
Q Consensus 74 --~d~~f~ps~~g 84 (231)
.|.+.|.-.|.
T Consensus 83 g~lD~lVHsIaFa 95 (259)
T COG0623 83 GKLDGLVHSIAFA 95 (259)
T ss_pred CcccEEEEEeccC
Confidence 56666654443
No 414
>COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism]
Probab=94.05 E-value=0.15 Score=43.70 Aligned_cols=33 Identities=33% Similarity=0.548 Sum_probs=30.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
|||+|.|+ |-+|+.+.-.|.+.|++|+++.|+.
T Consensus 1 mkI~IlGa-GAvG~l~g~~L~~~g~~V~~~~R~~ 33 (307)
T COG1893 1 MKILILGA-GAIGSLLGARLAKAGHDVTLLVRSR 33 (307)
T ss_pred CeEEEECC-cHHHHHHHHHHHhCCCeEEEEecHH
Confidence 68999998 9999999999999999999999875
No 415
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=93.99 E-value=0.14 Score=43.21 Aligned_cols=61 Identities=20% Similarity=0.201 Sum_probs=41.0
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777 6 NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFI 79 (231)
Q Consensus 6 ~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ 79 (231)
+|.|+|. |.+|+.++..|++.|++|++..|+... .+.+.. .+.. ...+..++++++|++++
T Consensus 1 ~IgvIG~-G~mG~~iA~~l~~~G~~V~~~dr~~~~---~~~~~~--~g~~-------~~~~~~~~~~~aDivi~ 61 (291)
T TIGR01505 1 KVGFIGL-GIMGSPMSINLAKAGYQLHVTTIGPEV---ADELLA--AGAV-------TAETARQVTEQADVIFT 61 (291)
T ss_pred CEEEEEe-cHHHHHHHHHHHHCCCeEEEEcCCHHH---HHHHHH--CCCc-------ccCCHHHHHhcCCEEEE
Confidence 4788885 999999999999999999999887421 111111 2221 11234567777888775
No 416
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=93.97 E-value=0.1 Score=43.72 Aligned_cols=34 Identities=21% Similarity=0.207 Sum_probs=30.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
.++++|+|+ |.+|+.++..|.+.|++|.++.|+.
T Consensus 117 ~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~ 150 (270)
T TIGR00507 117 NQRVLIIGA-GGAARAVALPLLKADCNVIIANRTV 150 (270)
T ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 568999998 8999999999999999999998874
No 417
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=93.96 E-value=0.12 Score=43.55 Aligned_cols=36 Identities=22% Similarity=0.241 Sum_probs=31.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
|+ .++|.|.|+ |.+|..++..|++.|++|+++.++.
T Consensus 1 ~~-~~kI~VIG~-G~mG~~ia~~la~~g~~V~~~d~~~ 36 (282)
T PRK05808 1 MG-IQKIGVIGA-GTMGNGIAQVCAVAGYDVVMVDISD 36 (282)
T ss_pred CC-ccEEEEEcc-CHHHHHHHHHHHHCCCceEEEeCCH
Confidence 55 468999998 9999999999999999999998764
No 418
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=93.96 E-value=0.25 Score=38.20 Aligned_cols=69 Identities=20% Similarity=0.186 Sum_probs=45.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcC-------------------CC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLL-------------------ED 63 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~-------------------~d 63 (231)
+.+|+|+|+ |.+|..-++.|...|++|+++..... .++... .....+..++ ..
T Consensus 20 p~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~~------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (168)
T PF01262_consen 20 PAKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERPE------RLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESY 92 (168)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSHH------HHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHH
T ss_pred CeEEEEECC-CHHHHHHHHHHhHCCCEEEeccCCHH------HHHhhhcccCceEEEcccccccccccchhhhhHHHHHh
Confidence 468999996 99999999999999999999887531 112222 4445555542 12
Q ss_pred HHHHHHHHccCCEEEE
Q 043777 64 EKSLLEAVKQVDVRFI 79 (231)
Q Consensus 64 ~~~l~~al~~~d~~f~ 79 (231)
...+.+.++.+|.+..
T Consensus 93 ~~~f~~~i~~~d~vI~ 108 (168)
T PF01262_consen 93 ESNFAEFIAPADIVIG 108 (168)
T ss_dssp HHHHHHHHHH-SEEEE
T ss_pred HHHHHHHHhhCcEEee
Confidence 3457777888888775
No 419
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=93.83 E-value=2.4 Score=35.94 Aligned_cols=33 Identities=24% Similarity=0.353 Sum_probs=29.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
|+|.++|. |.+|+.+++.|++.|++|.++.|+.
T Consensus 1 m~Ig~IGl-G~mG~~mA~~L~~~g~~v~v~dr~~ 33 (299)
T PRK12490 1 MKLGLIGL-GKMGGNMAERLREDGHEVVGYDVNQ 33 (299)
T ss_pred CEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCH
Confidence 47899985 9999999999999999999998864
No 420
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=93.79 E-value=0.27 Score=43.90 Aligned_cols=64 Identities=20% Similarity=0.181 Sum_probs=44.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777 3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP 80 (231)
Q Consensus 3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p 80 (231)
..++++|+|. |.+|+.++..|...|.+|++..+++.. . ......++.+. .+.++++++|+++..
T Consensus 211 ~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~r---a--~~A~~~G~~v~--------~l~eal~~aDVVI~a 274 (425)
T PRK05476 211 AGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPIC---A--LQAAMDGFRVM--------TMEEAAELGDIFVTA 274 (425)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchh---h--HHHHhcCCEec--------CHHHHHhCCCEEEEC
Confidence 3678999997 999999999999999999998886531 1 11111333321 145667788887653
No 421
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=93.76 E-value=0.12 Score=38.97 Aligned_cols=31 Identities=35% Similarity=0.590 Sum_probs=28.7
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 7 VLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 7 ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
|+|.|+ |-+|..++..|.+.|++|.++.|..
T Consensus 1 I~I~G~-GaiG~~~a~~L~~~g~~V~l~~r~~ 31 (151)
T PF02558_consen 1 ILIIGA-GAIGSLYAARLAQAGHDVTLVSRSP 31 (151)
T ss_dssp EEEEST-SHHHHHHHHHHHHTTCEEEEEESHH
T ss_pred CEEECc-CHHHHHHHHHHHHCCCceEEEEccc
Confidence 688998 9999999999999999999999975
No 422
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=93.73 E-value=0.16 Score=36.91 Aligned_cols=32 Identities=28% Similarity=0.371 Sum_probs=26.7
Q ss_pred eEEEEcCCChhHHHHHHHHHhC-CCCEEEE-EcC
Q 043777 6 NVLVIGAIGRIGYHFTRRSIEY-GHPKFAL-IRD 37 (231)
Q Consensus 6 ~ilVtGatG~iG~~i~~~L~~~-g~~v~~~-~R~ 37 (231)
++.|+|++|.+|+.+++.|.+. ++++..+ .|+
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~ 34 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASA 34 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCCceEEEEEech
Confidence 5789999999999999999985 7788777 443
No 423
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=93.73 E-value=0.27 Score=41.51 Aligned_cols=77 Identities=18% Similarity=0.028 Sum_probs=48.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEccc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSE 82 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~ 82 (231)
.++++|.|+ |+.|+.++.+|.+.|. +|+++.|+... ..++.+.+.....+.. +...+++...+.++|+++-...
T Consensus 125 ~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~k--a~~La~~~~~~~~~~~--~~~~~~~~~~~~~~DiVInaTp 199 (282)
T TIGR01809 125 GFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDK--LSRLVDLGVQVGVITR--LEGDSGGLAIEKAAEVLVSTVP 199 (282)
T ss_pred CceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHH--HHHHHHHhhhcCccee--ccchhhhhhcccCCCEEEECCC
Confidence 568999997 9999999999999996 68899887431 1122222221111111 2222344556677898876655
Q ss_pred CCC
Q 043777 83 YGA 85 (231)
Q Consensus 83 ~g~ 85 (231)
.|.
T Consensus 200 ~g~ 202 (282)
T TIGR01809 200 ADV 202 (282)
T ss_pred CCC
Confidence 553
No 424
>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.
Probab=93.71 E-value=0.11 Score=44.98 Aligned_cols=32 Identities=22% Similarity=0.310 Sum_probs=26.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEc
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIR 36 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R 36 (231)
++|+|+||||++|+++++.|.+.+ .++..+.+
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~ 33 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVA 33 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEE
Confidence 479999999999999999888876 57776644
No 425
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=93.70 E-value=0.15 Score=42.52 Aligned_cols=74 Identities=19% Similarity=0.016 Sum_probs=45.8
Q ss_pred EEEEcCCChhHHHHHHHHHhCC----CCEEEEEcCCCC-chhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777 7 VLVIGAIGRIGYHFTRRSIEYG----HPKFALIRDSAS-NFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPS 81 (231)
Q Consensus 7 ilVtGatG~iG~~i~~~L~~~g----~~v~~~~R~~~~-~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps 81 (231)
|.|+||+|.+|..++..|+..| .++.+++++... ......+++..... ....+.-..++.++++++|.++...
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~--~~~~i~~~~d~~~~~~~aDiVv~t~ 78 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL--ADIKVSITDDPYEAFKDADVVIITA 78 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc--cCcEEEECCchHHHhCCCCEEEECC
Confidence 5789999999999999999888 678888876532 11111122221111 0112222233577889999988854
Q ss_pred c
Q 043777 82 E 82 (231)
Q Consensus 82 ~ 82 (231)
.
T Consensus 79 ~ 79 (263)
T cd00650 79 G 79 (263)
T ss_pred C
Confidence 3
No 426
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=93.69 E-value=0.091 Score=41.50 Aligned_cols=33 Identities=27% Similarity=0.407 Sum_probs=26.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
|+|.|.|. |++|..++..|.+.|++|++++.+.
T Consensus 1 M~I~ViGl-GyvGl~~A~~lA~~G~~V~g~D~~~ 33 (185)
T PF03721_consen 1 MKIAVIGL-GYVGLPLAAALAEKGHQVIGVDIDE 33 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-H
T ss_pred CEEEEECC-CcchHHHHHHHHhCCCEEEEEeCCh
Confidence 68999985 9999999999999999999998864
No 427
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=93.67 E-value=0.19 Score=44.61 Aligned_cols=66 Identities=29% Similarity=0.334 Sum_probs=50.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcCCCCchhhh-hhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRDSASNFNFS-LLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP 80 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~~~~~~~~-~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p 80 (231)
.++++|+|| |-+|.-++++|.+.| ..|+++.|... +++ +...+ + +.+...+.+...+.++|++|..
T Consensus 178 ~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~e---rA~~La~~~--~-----~~~~~l~el~~~l~~~DvViss 245 (414)
T COG0373 178 DKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLE---RAEELAKKL--G-----AEAVALEELLEALAEADVVISS 245 (414)
T ss_pred cCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHH---HHHHHHHHh--C-----CeeecHHHHHHhhhhCCEEEEe
Confidence 578999998 999999999999999 56888888643 222 12222 1 5666788899999999999964
No 428
>TIGR00465 ilvC ketol-acid reductoisomerase. This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway
Probab=93.67 E-value=0.28 Score=42.14 Aligned_cols=64 Identities=19% Similarity=0.185 Sum_probs=43.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP 80 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p 80 (231)
+++|.|+|+ |.+|+++++.|.+.|+++++..|+.... .+... ..++.. .+ ..++++++|++++.
T Consensus 3 ~kkIgiIG~-G~mG~AiA~~L~~sG~~Viv~~~~~~~~--~~~a~--~~Gv~~-----~s---~~ea~~~ADiVvLa 66 (314)
T TIGR00465 3 GKTVAIIGY-GSQGHAQALNLRDSGLNVIVGLRKGGAS--WKKAT--EDGFKV-----GT---VEEAIPQADLIMNL 66 (314)
T ss_pred cCEEEEEeE-cHHHHHHHHHHHHCCCeEEEEECcChhh--HHHHH--HCCCEE-----CC---HHHHHhcCCEEEEe
Confidence 688999996 9999999999999998887666654211 11111 134431 12 45677889998864
No 429
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=93.65 E-value=0.14 Score=39.84 Aligned_cols=51 Identities=20% Similarity=0.255 Sum_probs=40.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP 80 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p 80 (231)
+++|+|+|+++.+|..+++.|.+.|..|+++.|.. +.+.+.++++|+++..
T Consensus 44 gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~--------------------------~~l~~~l~~aDiVIsa 94 (168)
T cd01080 44 GKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT--------------------------KNLKEHTKQADIVIVA 94 (168)
T ss_pred CCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc--------------------------hhHHHHHhhCCEEEEc
Confidence 68999999965679999999999998888887642 2456677888888754
No 430
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=93.64 E-value=0.25 Score=42.25 Aligned_cols=69 Identities=25% Similarity=0.236 Sum_probs=47.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEccc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSE 82 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~ 82 (231)
.++|+|.|+ |.+|+.+++.|...| ..|+++.|+... ..+....+ +... .+.+++.+++.++|+++....
T Consensus 178 ~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~r--a~~la~~~--g~~~-----~~~~~~~~~l~~aDvVi~at~ 247 (311)
T cd05213 178 GKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYER--AEELAKEL--GGNA-----VPLDELLELLNEADVVISATG 247 (311)
T ss_pred CCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHH--HHHHHHHc--CCeE-----EeHHHHHHHHhcCCEEEECCC
Confidence 679999998 999999999999866 678888886421 11122222 2222 233567788889999987544
No 431
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=93.64 E-value=0.35 Score=37.26 Aligned_cols=64 Identities=23% Similarity=0.274 Sum_probs=43.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777 3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFI 79 (231)
Q Consensus 3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ 79 (231)
++++|+|+|- |..|.+.+..|.+.|.+|++-.|..+.+. . +.-..|.++ .++.++.+.+|++.+
T Consensus 3 ~~k~IAViGy-GsQG~a~AlNLrDSG~~V~Vglr~~s~s~-~---~A~~~Gf~v--------~~~~eAv~~aDvV~~ 66 (165)
T PF07991_consen 3 KGKTIAVIGY-GSQGHAHALNLRDSGVNVIVGLREGSASW-E---KAKADGFEV--------MSVAEAVKKADVVML 66 (165)
T ss_dssp CTSEEEEES--SHHHHHHHHHHHHCC-EEEEEE-TTCHHH-H---HHHHTT-EC--------CEHHHHHHC-SEEEE
T ss_pred CCCEEEEECC-ChHHHHHHHHHHhCCCCEEEEecCCCcCH-H---HHHHCCCee--------ccHHHHHhhCCEEEE
Confidence 3689999998 77899999999999999999999875311 1 111145443 257788889998764
No 432
>PRK08818 prephenate dehydrogenase; Provisional
Probab=93.63 E-value=0.12 Score=45.33 Aligned_cols=37 Identities=16% Similarity=0.113 Sum_probs=32.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhC-CCCEEEEEcC
Q 043777 1 MAGKSNVLVIGAIGRIGYHFTRRSIEY-GHPKFALIRD 37 (231)
Q Consensus 1 M~~~~~ilVtGatG~iG~~i~~~L~~~-g~~v~~~~R~ 37 (231)
|...++|+|+|.+|.+|+++++.|.+. +++|++++|.
T Consensus 1 ~~~~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~ 38 (370)
T PRK08818 1 MIAQPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPA 38 (370)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCC
Confidence 666789999999999999999999975 7888888774
No 433
>PLN00203 glutamyl-tRNA reductase
Probab=93.61 E-value=0.18 Score=46.28 Aligned_cols=72 Identities=24% Similarity=0.339 Sum_probs=48.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEccc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSE 82 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~ 82 (231)
.++|+|+|+ |.+|+.+++.|...|. +|+++.|+... ...+...+ .++.+. +...+++.+++.++|+++....
T Consensus 266 ~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~er--a~~La~~~-~g~~i~---~~~~~dl~~al~~aDVVIsAT~ 338 (519)
T PLN00203 266 SARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEER--VAALREEF-PDVEII---YKPLDEMLACAAEADVVFTSTS 338 (519)
T ss_pred CCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHH--HHHHHHHh-CCCceE---eecHhhHHHHHhcCCEEEEccC
Confidence 578999998 9999999999999996 68888887531 11111222 132222 2233456778889999887543
No 434
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=93.59 E-value=0.58 Score=40.04 Aligned_cols=72 Identities=22% Similarity=0.167 Sum_probs=44.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC--CCEEEEEcCCCCch-hhhhhhhh-c-CCc-EEEEEcCCCHHHHHHHHccCCEEE
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYG--HPKFALIRDSASNF-NFSLLRVF-H-SGV-FDYWGLLEDEKSLLEAVKQVDVRF 78 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g--~~v~~~~R~~~~~~-~~~~~~~~-~-~~v-~~~~~D~~d~~~l~~al~~~d~~f 78 (231)
+||.|+|| |+||+.++-.|+.++ .++.++++...... .+..+.+- . .+. ..+.+| .+ .+.++++|+++
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~----y~~~~~aDiVv 74 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GD----YEDLKGADIVV 74 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CC----hhhhcCCCEEE
Confidence 58999999 999999999998776 36888888743211 11111111 1 111 112222 22 46778999998
Q ss_pred Eccc
Q 043777 79 IPSE 82 (231)
Q Consensus 79 ~ps~ 82 (231)
++..
T Consensus 75 itAG 78 (313)
T COG0039 75 ITAG 78 (313)
T ss_pred EeCC
Confidence 8653
No 435
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=93.56 E-value=0.35 Score=43.85 Aligned_cols=70 Identities=16% Similarity=0.156 Sum_probs=45.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFIPS 81 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~ps 81 (231)
+++|+|+|+ |.+|..+++.|.++|++|+++.+..... .....+.+. .++.+..++-.. ...++|.+++..
T Consensus 16 ~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~-~~~~~~~l~~~gv~~~~~~~~~------~~~~~D~Vv~s~ 86 (480)
T PRK01438 16 GLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDER-HRALAAILEALGATVRLGPGPT------LPEDTDLVVTSP 86 (480)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhh-hHHHHHHHHHcCCEEEECCCcc------ccCCCCEEEECC
Confidence 568999998 9999999999999999999988654211 111112333 577776544221 234567666543
No 436
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=93.56 E-value=0.39 Score=43.42 Aligned_cols=64 Identities=19% Similarity=0.209 Sum_probs=44.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777 3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP 80 (231)
Q Consensus 3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p 80 (231)
..++++|+|. |.||+.+++.|...|.+|++..+++.. . ......++.+. .+.++++++|+++..
T Consensus 253 aGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~---a--~~A~~~G~~~~--------~leell~~ADIVI~a 316 (476)
T PTZ00075 253 AGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPIC---A--LQAAMEGYQVV--------TLEDVVETADIFVTA 316 (476)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchh---H--HHHHhcCceec--------cHHHHHhcCCEEEEC
Confidence 4689999997 899999999999999999888776431 1 01111333322 256678889987764
No 437
>PRK00711 D-amino acid dehydrogenase small subunit; Validated
Probab=93.55 E-value=0.12 Score=45.74 Aligned_cols=33 Identities=27% Similarity=0.366 Sum_probs=30.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
|+|+|+|| |.+|..++.+|.++|++|.++.|..
T Consensus 1 ~~v~IVG~-Gi~Gls~A~~l~~~g~~V~vle~~~ 33 (416)
T PRK00711 1 MRVVVLGS-GVIGVTSAWYLAQAGHEVTVIDRQP 33 (416)
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 47999998 9999999999999999999999964
No 438
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=93.54 E-value=0.14 Score=43.12 Aligned_cols=35 Identities=23% Similarity=0.185 Sum_probs=31.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA 39 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~ 39 (231)
.++|.|.|+ |.+|..++..|...|++|++++++..
T Consensus 3 ~~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~ 37 (287)
T PRK08293 3 IKNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDE 37 (287)
T ss_pred ccEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHH
Confidence 468999997 99999999999999999999998753
No 439
>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]
Probab=93.52 E-value=0.2 Score=43.80 Aligned_cols=68 Identities=18% Similarity=0.117 Sum_probs=52.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHH-HHHHHHccCCEEE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEK-SLLEAVKQVDVRF 78 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~-~l~~al~~~d~~f 78 (231)
+++||+.|+ ||+.+.+++.|.+++ .+|++.+|.... + +++. ..++.+..|+++++ .|.+.++..|.+.
T Consensus 2 ~~~vlllgs-g~v~~p~~d~ls~~~dv~vtva~~~~~~---~---~~~~~~~~~~av~ldv~~~~~~L~~~v~~~D~vi 73 (445)
T KOG0172|consen 2 KKGVLLLGS-GFVSRPVADFLSRKKDVNVTVASRTLKD---A---EALVKGINIKAVSLDVADEELALRKEVKPLDLVI 73 (445)
T ss_pred CcceEEecC-ccccchHHHHHhhcCCceEEEehhhHHH---H---HHHhcCCCccceEEEccchHHHHHhhhcccceee
Confidence 468999996 999999999999876 677777775421 2 2232 34778899999998 8999999988843
No 440
>PRK05479 ketol-acid reductoisomerase; Provisional
Probab=93.52 E-value=0.29 Score=42.22 Aligned_cols=64 Identities=22% Similarity=0.228 Sum_probs=44.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP 80 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p 80 (231)
.++|.|+|. |.+|++++..|.+.|++|++..|+.+.. .+.... .++.. . +..++++++|++++.
T Consensus 17 gktIgIIG~-GsmG~AlA~~L~~sG~~Vvv~~r~~~~s--~~~A~~--~G~~~-----~---s~~eaa~~ADVVvLa 80 (330)
T PRK05479 17 GKKVAIIGY-GSQGHAHALNLRDSGVDVVVGLREGSKS--WKKAEA--DGFEV-----L---TVAEAAKWADVIMIL 80 (330)
T ss_pred CCEEEEEee-HHHHHHHHHHHHHCCCEEEEEECCchhh--HHHHHH--CCCee-----C---CHHHHHhcCCEEEEc
Confidence 578999997 9999999999999999998877764321 111111 33321 1 456778888987763
No 441
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=93.51 E-value=0.13 Score=44.27 Aligned_cols=33 Identities=15% Similarity=0.123 Sum_probs=30.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
|+|.|.|| |-+|..++..|.++|++|.++.|+.
T Consensus 1 MkI~IiGa-Ga~G~ala~~L~~~g~~V~l~~r~~ 33 (326)
T PRK14620 1 MKISILGA-GSFGTAIAIALSSKKISVNLWGRNH 33 (326)
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCeEEEEecCH
Confidence 47999998 9999999999999999999999864
No 442
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=93.47 E-value=0.15 Score=43.09 Aligned_cols=34 Identities=15% Similarity=0.110 Sum_probs=31.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
.++|.|.|+ |.+|..++..|.+.|++|++++++.
T Consensus 3 i~~I~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~ 36 (291)
T PRK06035 3 IKVIGVVGS-GVMGQGIAQVFARTGYDVTIVDVSE 36 (291)
T ss_pred CcEEEEECc-cHHHHHHHHHHHhcCCeEEEEeCCH
Confidence 468999997 9999999999999999999998875
No 443
>PLN02494 adenosylhomocysteinase
Probab=93.45 E-value=0.38 Score=43.41 Aligned_cols=63 Identities=16% Similarity=0.173 Sum_probs=43.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777 3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFI 79 (231)
Q Consensus 3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ 79 (231)
..++++|+|. |.||+.+++.+...|.+|+++.+++.. . ......+..++ .+.++++.+|+++.
T Consensus 253 aGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r---~--~eA~~~G~~vv--------~leEal~~ADVVI~ 315 (477)
T PLN02494 253 AGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPIC---A--LQALMEGYQVL--------TLEDVVSEADIFVT 315 (477)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchh---h--HHHHhcCCeec--------cHHHHHhhCCEEEE
Confidence 3688999997 999999999999999999888876531 1 11111344322 24556777888775
No 444
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=93.43 E-value=0.12 Score=47.67 Aligned_cols=34 Identities=26% Similarity=0.241 Sum_probs=30.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
.++++|+|| |++|++++.+|.+.|++|.++.|+.
T Consensus 379 ~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~ 412 (529)
T PLN02520 379 GKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTY 412 (529)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 468999999 8999999999999999988888863
No 445
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=93.41 E-value=0.32 Score=41.91 Aligned_cols=34 Identities=26% Similarity=0.357 Sum_probs=28.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRD 37 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~ 37 (231)
..+|||+||+|.+|+..++-+...|+.+++.+.+
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s 176 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSS 176 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecC
Confidence 4689999999999999999888899776666554
No 446
>PRK06545 prephenate dehydrogenase; Validated
Probab=93.41 E-value=0.3 Score=42.65 Aligned_cols=67 Identities=22% Similarity=0.202 Sum_probs=43.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP 80 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p 80 (231)
++|.|+|. |.+|..++..|.+.|+++.+..++... .+.... .+..+.. + ...++.++++++|++++.
T Consensus 1 ~~I~iIG~-GliG~siA~~L~~~G~~v~i~~~~~~~---~~~~~a--~~~~~~~-~--~~~~~~~~~~~aDlVila 67 (359)
T PRK06545 1 RTVLIVGL-GLIGGSLALAIKAAGPDVFIIGYDPSA---AQLARA--LGFGVID-E--LAADLQRAAAEADLIVLA 67 (359)
T ss_pred CeEEEEEe-CHHHHHHHHHHHhcCCCeEEEEeCCCH---HHHHHH--hcCCCCc-c--cccCHHHHhcCCCEEEEe
Confidence 46889986 999999999999999999999887642 111111 1111110 1 113456677889988763
No 447
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=93.40 E-value=0.33 Score=40.21 Aligned_cols=61 Identities=10% Similarity=0.035 Sum_probs=47.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHcc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQ 73 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~ 73 (231)
+++|+|.|||+ =|+.+++.|.++|+++++.+-..... .. .++.+..+-+.|.+.+.+.+++
T Consensus 2 ~~~IlvlgGT~-egr~la~~L~~~g~~v~~Svat~~g~--------~~~~~~~v~~G~l~~~~~l~~~l~~ 63 (248)
T PRK08057 2 MPRILLLGGTS-EARALARALAAAGVDIVLSLAGRTGG--------PADLPGPVRVGGFGGAEGLAAYLRE 63 (248)
T ss_pred CceEEEEechH-HHHHHHHHHHhCCCeEEEEEccCCCC--------cccCCceEEECCCCCHHHHHHHHHH
Confidence 37899999988 69999999999999887665443210 11 5667788888899999999875
No 448
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=93.40 E-value=0.33 Score=43.34 Aligned_cols=69 Identities=19% Similarity=0.222 Sum_probs=48.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEccc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSE 82 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~ 82 (231)
.++++|+|+ |.+|+.+++.|...| .+|+++.|+... .......+ +...+ +.+++.+++.++|+++....
T Consensus 180 ~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~r--a~~la~~~--g~~~i-----~~~~l~~~l~~aDvVi~aT~ 249 (417)
T TIGR01035 180 GKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYER--AEDLAKEL--GGEAV-----KFEDLEEYLAEADIVISSTG 249 (417)
T ss_pred CCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHH--HHHHHHHc--CCeEe-----eHHHHHHHHhhCCEEEECCC
Confidence 578999997 999999999999999 779999887421 01111222 22222 23567788889999987644
No 449
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=93.39 E-value=0.68 Score=37.68 Aligned_cols=66 Identities=17% Similarity=0.223 Sum_probs=46.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQVDVRFIP 80 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~~d~~f~p 80 (231)
+++|||.|| |.++..=++.|++.|..|++++-.-+ + + +..+. ..+++++-++.. +. +++++.+|..
T Consensus 25 ~~~VLVVGG-G~VA~RK~~~Ll~~gA~VtVVap~i~--~--e-l~~l~~~~~i~~~~r~~~~-~d----l~g~~LViaA 92 (223)
T PRK05562 25 KIKVLIIGG-GKAAFIKGKTFLKKGCYVYILSKKFS--K--E-FLDLKKYGNLKLIKGNYDK-EF----IKDKHLIVIA 92 (223)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCCC--H--H-HHHHHhCCCEEEEeCCCCh-HH----hCCCcEEEEC
Confidence 578999998 99999999999999999999875432 1 1 11222 567777766642 22 4667777655
No 450
>COG0665 DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]
Probab=93.37 E-value=0.15 Score=44.43 Aligned_cols=37 Identities=27% Similarity=0.316 Sum_probs=32.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
|.++++|+|+|| |.+|...+-.|.+.|++|+++.+..
T Consensus 1 ~~~~~~vvVIGg-Gi~Gls~A~~La~~G~~V~vie~~~ 37 (387)
T COG0665 1 MSMKMDVVIIGG-GIVGLSAAYYLAERGADVTVLEAGE 37 (387)
T ss_pred CCCcceEEEECC-cHHHHHHHHHHHHcCCEEEEEecCc
Confidence 456789999996 9999999999999999998888754
No 451
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=93.36 E-value=0.15 Score=43.83 Aligned_cols=34 Identities=24% Similarity=0.296 Sum_probs=31.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
.++|.|.|+ |-+|+.++..|+..|++|++.++++
T Consensus 7 i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~ 40 (321)
T PRK07066 7 IKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAP 40 (321)
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 368999997 9999999999999999999999875
No 452
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=93.35 E-value=0.31 Score=43.50 Aligned_cols=68 Identities=21% Similarity=0.252 Sum_probs=47.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCCchhhhhh-hhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSASNFNFSLL-RVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPS 81 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~~~~~~~~-~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps 81 (231)
+++|+|.|+ |.+|+.++..|.+.|. ++++..|... +++.+ ..+. .. .....+++.+.+.++|+++...
T Consensus 181 ~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~---ra~~La~~~~-~~-----~~~~~~~l~~~l~~aDiVI~aT 250 (414)
T PRK13940 181 SKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIE---KAQKITSAFR-NA-----SAHYLSELPQLIKKADIIIAAV 250 (414)
T ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHH---HHHHHHHHhc-CC-----eEecHHHHHHHhccCCEEEECc
Confidence 578999998 9999999999999995 6888888642 12222 2221 11 2223467788899999988654
No 453
>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional
Probab=93.32 E-value=0.14 Score=43.85 Aligned_cols=33 Identities=18% Similarity=0.286 Sum_probs=26.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIR 36 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R 36 (231)
+.+|.|.||||++|..+++.|.+.. .++..+.+
T Consensus 2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s 35 (313)
T PRK11863 2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPE 35 (313)
T ss_pred CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEec
Confidence 4799999999999999999888776 34444443
No 454
>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively. This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.
Probab=93.26 E-value=0.77 Score=39.09 Aligned_cols=30 Identities=23% Similarity=0.438 Sum_probs=24.6
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCC-CEEEEEc
Q 043777 6 NVLVIGAIGRIGYHFTRRSIEYGH-PKFALIR 36 (231)
Q Consensus 6 ~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R 36 (231)
||+|.|+ |.+|..+++.|...|. ++++++.
T Consensus 1 kVLIvGa-GGLGs~vA~~La~aGVg~ItlvD~ 31 (307)
T cd01486 1 KCLLLGA-GTLGCNVARNLLGWGVRHITFVDS 31 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCCeEEEECC
Confidence 5899998 8899999999999995 4555543
No 455
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=93.18 E-value=0.17 Score=42.76 Aligned_cols=34 Identities=18% Similarity=0.201 Sum_probs=31.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA 39 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~ 39 (231)
++|.|.|+ |.+|..++..|.++|++|++++|+..
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~ 35 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQE 35 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHH
Confidence 57999998 99999999999999999999998753
No 456
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=93.13 E-value=0.38 Score=40.67 Aligned_cols=34 Identities=21% Similarity=0.233 Sum_probs=29.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDS 38 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~ 38 (231)
.++++|.|| |+.|++++-+|.+.|. +++++.|+.
T Consensus 127 ~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~ 161 (283)
T PRK14027 127 LDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_pred CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCH
Confidence 468999998 9999999999999995 688888864
No 457
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=93.10 E-value=0.14 Score=42.97 Aligned_cols=33 Identities=21% Similarity=0.363 Sum_probs=29.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
|+|.|.|. |.+|..++..|.+.|++|.+++|+.
T Consensus 1 m~I~IIG~-G~mG~sla~~L~~~g~~V~~~d~~~ 33 (279)
T PRK07417 1 MKIGIVGL-GLIGGSLGLDLRSLGHTVYGVSRRE 33 (279)
T ss_pred CeEEEEee-cHHHHHHHHHHHHCCCEEEEEECCH
Confidence 47999995 9999999999999999999998864
No 458
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=93.07 E-value=0.51 Score=40.44 Aligned_cols=61 Identities=21% Similarity=0.303 Sum_probs=45.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFI 79 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ 79 (231)
.++|.|.|- |.||+.+++.|..-|.+|.+..|..... .++... ....++.++++++|++.+
T Consensus 136 g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~----------~~~~~~----~~~~~l~e~l~~aDvvv~ 196 (312)
T PRK15469 136 DFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSW----------PGVQSF----AGREELSAFLSQTRVLIN 196 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCC----------CCceee----cccccHHHHHhcCCEEEE
Confidence 578999996 9999999999999999999988754210 111111 134578889999998765
No 459
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=93.05 E-value=0.46 Score=42.24 Aligned_cols=35 Identities=23% Similarity=0.239 Sum_probs=31.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
..++++|.|. |.+|+.++..+...|.+|+++.+++
T Consensus 194 ~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp 228 (406)
T TIGR00936 194 AGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDP 228 (406)
T ss_pred CcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCCh
Confidence 3678999997 9999999999999999999988765
No 460
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=93.03 E-value=0.16 Score=40.66 Aligned_cols=33 Identities=18% Similarity=0.223 Sum_probs=29.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRD 37 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~ 37 (231)
.++|+|.|+ |.+|+.++..|.+.|. ++++++++
T Consensus 21 ~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 21 QATVAICGL-GGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred CCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence 568999998 8899999999999997 58887776
No 461
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=93.03 E-value=0.77 Score=40.40 Aligned_cols=33 Identities=27% Similarity=0.263 Sum_probs=28.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRD 37 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~ 37 (231)
.++|+|.|+ |.+|+.++..|...|. ++++++++
T Consensus 135 ~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 135 EARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred cCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 468999987 8899999999999996 67777776
No 462
>PRK07236 hypothetical protein; Provisional
Probab=93.01 E-value=0.2 Score=43.88 Aligned_cols=34 Identities=18% Similarity=0.078 Sum_probs=31.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
.++|+|.|| |-.|..++..|.+.|++|+++-|..
T Consensus 6 ~~~ViIVGa-G~aGl~~A~~L~~~G~~v~v~E~~~ 39 (386)
T PRK07236 6 GPRAVVIGG-SLGGLFAALLLRRAGWDVDVFERSP 39 (386)
T ss_pred CCeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence 468999998 9999999999999999999999875
No 463
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=92.87 E-value=0.34 Score=43.33 Aligned_cols=69 Identities=26% Similarity=0.248 Sum_probs=47.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEccc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSE 82 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~ 82 (231)
.++|+|+|+ |.+|+.+++.|...|. +|++..|+... .......+ +. +..+.+++.+++.++|+++....
T Consensus 182 ~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~r--a~~la~~~--g~-----~~~~~~~~~~~l~~aDvVI~aT~ 251 (423)
T PRK00045 182 GKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLER--AEELAEEF--GG-----EAIPLDELPEALAEADIVISSTG 251 (423)
T ss_pred CCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHH--HHHHHHHc--CC-----cEeeHHHHHHHhccCCEEEECCC
Confidence 578999997 9999999999999996 68888886421 11122222 22 22234567778889999887644
No 464
>PLN02928 oxidoreductase family protein
Probab=92.87 E-value=0.38 Score=41.91 Aligned_cols=73 Identities=21% Similarity=0.256 Sum_probs=47.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFI 79 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~ 79 (231)
.+++.|.|- |.||+.+++.|..-|.+|.+..|.....+ .... .++ ..+..+........++.++++++|++++
T Consensus 159 gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl 232 (347)
T PLN02928 159 GKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWTSEP-EDGL-LIPNGDVDDLVDEKGGHEDIYEFAGEADIVVL 232 (347)
T ss_pred CCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCChhh-hhhh-ccccccccccccccCcccCHHHHHhhCCEEEE
Confidence 578999997 99999999999999999999887532111 0000 000 1111111111245678999999999776
No 465
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=92.80 E-value=0.19 Score=45.11 Aligned_cols=26 Identities=15% Similarity=0.174 Sum_probs=22.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHh
Q 043777 1 MAGKSNVLVIGAIGRIGYHFTRRSIE 26 (231)
Q Consensus 1 M~~~~~ilVtGatG~iG~~i~~~L~~ 26 (231)
|.+.-+|+||||+|+||.+++-.+.+
T Consensus 120 ~~~p~~V~vtgAag~i~Y~l~~~ia~ 145 (452)
T cd05295 120 KINPLQVCITNASAPLCYHLIPSLAS 145 (452)
T ss_pred CCCceEEEEecCcHHHHHHHHHHHhC
Confidence 34456899999999999999988876
No 466
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=92.76 E-value=0.19 Score=43.02 Aligned_cols=75 Identities=20% Similarity=0.017 Sum_probs=44.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCC--CEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEccc
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGH--PKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSE 82 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~--~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~ 82 (231)
|||.|+|++|.+|++++-.|..++. ++.+++++ .....+..+.+-.....+... ...+++.+.++++|++++.+.
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~-~a~g~alDL~~~~~~~~i~~~--~~~~~~y~~~~daDivvitaG 77 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV-NTPGVAADLSHINTPAKVTGY--LGPEELKKALKGADVVVIPAG 77 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC-ccceeehHhHhCCCcceEEEe--cCCCchHHhcCCCCEEEEeCC
Confidence 5899999999999999999988874 57777765 211111101111011122211 012235678899999887543
No 467
>TIGR00877 purD phosphoribosylamine--glycine ligase. This enzyme appears as a monofunctional protein in prokaryotes but as part of a larger, multidomain protein in eukaryotes.
Probab=92.74 E-value=0.43 Score=42.47 Aligned_cols=68 Identities=19% Similarity=0.173 Sum_probs=45.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc--CCEEEE
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ--VDVRFI 79 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~--~d~~f~ 79 (231)
|||+|+|+ |+.+..++.++.+.|+.+.+..-+....+ + ......++..|..|.+.+.+.++. +|.++.
T Consensus 1 ~kiliiG~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~d~~~l~~~~~~~~id~vi~ 70 (423)
T TIGR00877 1 MKVLVIGN-GGREHALAWKLAQSPLVKYVYVAPGNAGT-A-----RLAKNKNVAISITDIEALVEFAKKKKIDLAVI 70 (423)
T ss_pred CEEEEECC-ChHHHHHHHHHHhCCCccEEEEECCCHHH-h-----hhcccccccCCCCCHHHHHHHHHHhCCCEEEE
Confidence 68999998 77799999999998876665544332110 0 002223455788999998888876 555553
No 468
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.73 E-value=0.2 Score=42.28 Aligned_cols=35 Identities=9% Similarity=0.065 Sum_probs=30.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcC
Q 043777 3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRD 37 (231)
Q Consensus 3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~ 37 (231)
.+++++|.|++|.+|+.++..|++.|.+|+++.|+
T Consensus 158 ~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~ 192 (283)
T PRK14192 158 AGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR 192 (283)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 36799999998899999999999999988887764
No 469
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=92.73 E-value=0.25 Score=42.93 Aligned_cols=37 Identities=22% Similarity=0.208 Sum_probs=28.5
Q ss_pred CCC-CCeEEEEcCCChhHHHHHHHHHh-CCCC---EEEEEcC
Q 043777 1 MAG-KSNVLVIGAIGRIGYHFTRRSIE-YGHP---KFALIRD 37 (231)
Q Consensus 1 M~~-~~~ilVtGatG~iG~~i~~~L~~-~g~~---v~~~~R~ 37 (231)
|+. .++|.|.||||.+|+.+++.|.+ ...+ +..+...
T Consensus 1 ~~~~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~ 42 (347)
T PRK06728 1 MSEKGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSK 42 (347)
T ss_pred CCCCCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECc
Confidence 553 46999999999999999999985 5666 4555443
No 470
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=92.70 E-value=0.62 Score=41.53 Aligned_cols=63 Identities=19% Similarity=0.115 Sum_probs=43.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP 80 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p 80 (231)
.++|+|.|+ |.||+.++..+...|.+|++..+++.. ...... .++..+ + +.++++++|+++..
T Consensus 202 GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R---~~~A~~--~G~~~~--~------~~e~v~~aDVVI~a 264 (413)
T cd00401 202 GKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPIC---ALQAAM--EGYEVM--T------MEEAVKEGDIFVTT 264 (413)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhh---HHHHHh--cCCEEc--c------HHHHHcCCCEEEEC
Confidence 678999998 999999999999999999888776431 111111 444332 1 23566788887754
No 471
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=92.63 E-value=0.61 Score=38.74 Aligned_cols=36 Identities=31% Similarity=0.319 Sum_probs=28.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC-CCE-EEEEcCCC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYG-HPK-FALIRDSA 39 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g-~~v-~~~~R~~~ 39 (231)
++||+|.||+|-.|+.+++.+.+.. .++ -++.|..+
T Consensus 2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~ 39 (266)
T COG0289 2 MIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGS 39 (266)
T ss_pred CceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCCc
Confidence 4799999999999999999999876 454 35666653
No 472
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=92.62 E-value=0.35 Score=40.88 Aligned_cols=35 Identities=23% Similarity=0.243 Sum_probs=30.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcCCC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRDSA 39 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~~ 39 (231)
.++++|.|| |+.+++++.+|++.| .+++++.|..+
T Consensus 126 ~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ 161 (283)
T COG0169 126 GKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRE 161 (283)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHH
Confidence 478999998 889999999999999 57999999753
No 473
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=92.59 E-value=0.27 Score=42.34 Aligned_cols=38 Identities=16% Similarity=0.125 Sum_probs=31.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCC
Q 043777 1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSA 39 (231)
Q Consensus 1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~ 39 (231)
|.+.+||.|+|| |.+|+.++..+...|. ++++++++..
T Consensus 3 ~~~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~ 41 (321)
T PTZ00082 3 MIKRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKN 41 (321)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCc
Confidence 556789999996 9999999999988885 7888887654
No 474
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=92.58 E-value=0.29 Score=38.23 Aligned_cols=62 Identities=29% Similarity=0.297 Sum_probs=43.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFI 79 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ 79 (231)
.++|.|.|. |.||+.+++.|..-|.+|.+.+|.... ...... .++ ...++.++++.+|++++
T Consensus 36 g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~---~~~~~~--~~~--------~~~~l~ell~~aDiv~~ 97 (178)
T PF02826_consen 36 GKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKP---EEGADE--FGV--------EYVSLDELLAQADIVSL 97 (178)
T ss_dssp TSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHH---HHHHHH--TTE--------EESSHHHHHHH-SEEEE
T ss_pred CCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCCh---hhhccc--ccc--------eeeehhhhcchhhhhhh
Confidence 679999997 999999999999999999999997631 100011 222 12356788899999776
No 475
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=92.55 E-value=0.16 Score=45.45 Aligned_cols=34 Identities=21% Similarity=0.203 Sum_probs=30.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
+++++|+|++| +|.++++.|.+.|+.|.+.+++.
T Consensus 5 ~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~ 38 (447)
T PRK02472 5 NKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKP 38 (447)
T ss_pred CCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCC
Confidence 57899999966 99999999999999999988754
No 476
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=92.55 E-value=0.3 Score=33.26 Aligned_cols=32 Identities=25% Similarity=0.371 Sum_probs=28.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhC-CCCEEEEEc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEY-GHPKFALIR 36 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~-g~~v~~~~R 36 (231)
.++++|.|+ |.+|+.++..|.+. +.++.++.|
T Consensus 23 ~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 23 GKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence 578999998 99999999999998 567877777
No 477
>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=92.35 E-value=0.77 Score=41.31 Aligned_cols=74 Identities=19% Similarity=0.184 Sum_probs=49.6
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777 6 NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFIPS 81 (231)
Q Consensus 6 ~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~ps 81 (231)
+|+|.|+ |..|...++.|.++|+.|.+.+++..... ......+. .++.+..+.-.+.+.+...+++.|.++..+
T Consensus 2 ~v~viG~-G~sG~s~a~~l~~~G~~V~~~D~~~~~~~-~~~~~~l~~~gi~~~~g~~~~~~~~~~~~~~~d~vv~s~ 76 (459)
T PRK02705 2 IAHVIGL-GRSGIAAARLLKAQGWEVVVSDRNDSPEL-LERQQELEQEGITVKLGKPLELESFQPWLDQPDLVVVSP 76 (459)
T ss_pred eEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCCchhh-HHHHHHHHHcCCEEEECCccchhhhhHHhhcCCEEEECC
Confidence 6899997 88999999999999999999987653211 11111233 567776554334445556677788877643
No 478
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=92.35 E-value=0.24 Score=36.70 Aligned_cols=33 Identities=27% Similarity=0.392 Sum_probs=27.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRD 37 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~ 37 (231)
+++|+|.|+ |.+|+.+++.|...|. .+++++.+
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d 35 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDD 35 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESS
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCc
Confidence 468999998 8999999999999996 57777665
No 479
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.29 E-value=0.23 Score=42.28 Aligned_cols=34 Identities=12% Similarity=0.108 Sum_probs=31.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRD 37 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~ 37 (231)
+++|+|.|.+|.+|+.++..|+++|++|+++.|.
T Consensus 159 Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~ 192 (301)
T PRK14194 159 GKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSR 192 (301)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCCCEEEEECCC
Confidence 6899999999999999999999999999998665
No 480
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional
Probab=92.28 E-value=3.3 Score=37.61 Aligned_cols=68 Identities=10% Similarity=0.044 Sum_probs=44.3
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhh-hc-CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777 6 NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRV-FH-SGVFDYWGLLEDEKSLLEAVKQVDVRFI 79 (231)
Q Consensus 6 ~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~-~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~ 79 (231)
+|.|+|. |-.|+.++..|.++|++|.+..|+.+. .+.+.. .. .+..+.. ..+.+++.+.++++|++++
T Consensus 3 ~IgvIGL-G~MG~~lA~nL~~~G~~V~v~dr~~~~---~~~l~~~~~~~g~~i~~--~~s~~e~v~~l~~~d~Iil 72 (470)
T PTZ00142 3 DIGLIGL-AVMGQNLALNIASRGFKISVYNRTYEK---TEEFVKKAKEGNTRVKG--YHTLEELVNSLKKPRKVIL 72 (470)
T ss_pred EEEEEeE-hHHHHHHHHHHHHCCCeEEEEeCCHHH---HHHHHHhhhhcCCccee--cCCHHHHHhcCCCCCEEEE
Confidence 7999996 999999999999999999999997532 111111 11 1322211 2355555555556786654
No 481
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.25 E-value=0.24 Score=42.11 Aligned_cols=32 Identities=16% Similarity=0.111 Sum_probs=30.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALI 35 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~ 35 (231)
+++|+|.|.+|.+|+.++..|+++|++|+++.
T Consensus 158 Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~ 189 (296)
T PRK14188 158 GLNAVVIGRSNLVGKPMAQLLLAANATVTIAH 189 (296)
T ss_pred CCEEEEEcCCcchHHHHHHHHHhCCCEEEEEC
Confidence 68999999999999999999999999999884
No 482
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=92.14 E-value=0.29 Score=41.38 Aligned_cols=35 Identities=31% Similarity=0.420 Sum_probs=31.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
..+++|+||+|.+|..+++.+...|..|++++|+.
T Consensus 163 ~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~ 197 (332)
T cd08259 163 GDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSP 197 (332)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCH
Confidence 46899999999999999999999999998888754
No 483
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=92.07 E-value=1.1 Score=40.32 Aligned_cols=72 Identities=18% Similarity=0.227 Sum_probs=46.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEccc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSE 82 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~ 82 (231)
.++|+|+|+ |..|.++++.|.++|+.|.+.++..... ..+.++....++.+..+...+ ..+.++|.++.++.
T Consensus 5 ~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~~~-~~~~l~~~~~gi~~~~g~~~~-----~~~~~~d~vv~spg 76 (445)
T PRK04308 5 NKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELKPE-RVAQIGKMFDGLVFYTGRLKD-----ALDNGFDILALSPG 76 (445)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCch-hHHHHhhccCCcEEEeCCCCH-----HHHhCCCEEEECCC
Confidence 578999998 6899999999999999999888654321 011111111366665544321 13356788776544
No 484
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=92.05 E-value=0.26 Score=41.68 Aligned_cols=74 Identities=18% Similarity=0.130 Sum_probs=47.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQVDVRFI 79 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~~d~~f~ 79 (231)
.++++|.|+ |+.|++++..|.+.|. +|+++.|+... ...+.+.+. ....+ ... +++.+.++++|++..
T Consensus 127 ~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~k--a~~la~~l~~~~~~~~~--~~~---~~~~~~~~~aDiVIn 198 (284)
T PRK12549 127 LERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPAR--AAALADELNARFPAARA--TAG---SDLAAALAAADGLVH 198 (284)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHH--HHHHHHHHHhhCCCeEE--Eec---cchHhhhCCCCEEEE
Confidence 468999998 8899999999999996 68899887432 111222221 11222 111 234556778898876
Q ss_pred cccCCC
Q 043777 80 PSEYGA 85 (231)
Q Consensus 80 ps~~g~ 85 (231)
.+.-|.
T Consensus 199 aTp~Gm 204 (284)
T PRK12549 199 ATPTGM 204 (284)
T ss_pred CCcCCC
Confidence 655553
No 485
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=92.05 E-value=0.32 Score=41.05 Aligned_cols=35 Identities=26% Similarity=0.317 Sum_probs=30.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA 39 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~ 39 (231)
.++|+|.| .|.+|+++++.|.+.|+.+.++.++.+
T Consensus 3 ~~~v~IvG-~GliG~s~a~~l~~~g~~v~i~g~d~~ 37 (279)
T COG0287 3 SMKVGIVG-LGLMGGSLARALKEAGLVVRIIGRDRS 37 (279)
T ss_pred CcEEEEEC-CchHHHHHHHHHHHcCCeEEEEeecCc
Confidence 46777766 699999999999999999999998865
No 486
>PRK07574 formate dehydrogenase; Provisional
Probab=92.04 E-value=0.29 Score=43.25 Aligned_cols=63 Identities=25% Similarity=0.203 Sum_probs=44.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFI 79 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ 79 (231)
.|+|.|.|. |.||+.+++.|..-|.+|.+..|.... .+.... .++. -..++.++++.+|++++
T Consensus 192 gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~---~~~~~~--~g~~-------~~~~l~ell~~aDvV~l 254 (385)
T PRK07574 192 GMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLP---EEVEQE--LGLT-------YHVSFDSLVSVCDVVTI 254 (385)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCc---hhhHhh--cCce-------ecCCHHHHhhcCCEEEE
Confidence 578999997 999999999999999999998886421 100011 1221 12357788899998765
No 487
>PRK07208 hypothetical protein; Provisional
Probab=92.03 E-value=0.3 Score=44.09 Aligned_cols=37 Identities=32% Similarity=0.478 Sum_probs=33.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
|++.++|+|+|| |.-|...+..|.++|++|+++-+..
T Consensus 1 ~~~~~~vvIiGa-GisGL~aA~~L~~~g~~v~v~E~~~ 37 (479)
T PRK07208 1 MTNKKSVVIIGA-GPAGLTAAYELLKRGYPVTVLEADP 37 (479)
T ss_pred CCCCCcEEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence 777889999998 9999999999999999999987654
No 488
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=91.97 E-value=0.71 Score=39.74 Aligned_cols=62 Identities=24% Similarity=0.269 Sum_probs=43.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFI 79 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ 79 (231)
.++|.|+|- |.+|+.+++.|...|++|++..|... . .+.... .++.+ .++.++++.+|++.+
T Consensus 16 gKtVGIIG~-GsIG~amA~nL~d~G~~ViV~~r~~~-s--~~~A~~--~G~~v--------~sl~Eaak~ADVV~l 77 (335)
T PRK13403 16 GKTVAVIGY-GSQGHAQAQNLRDSGVEVVVGVRPGK-S--FEVAKA--DGFEV--------MSVSEAVRTAQVVQM 77 (335)
T ss_pred cCEEEEEeE-cHHHHHHHHHHHHCcCEEEEEECcch-h--hHHHHH--cCCEE--------CCHHHHHhcCCEEEE
Confidence 578999996 99999999999999999998877531 1 111111 33322 146778888888664
No 489
>PLN02256 arogenate dehydrogenase
Probab=91.97 E-value=0.28 Score=41.86 Aligned_cols=34 Identities=24% Similarity=0.459 Sum_probs=30.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
+++|.|.|. |.+|+.+++.|.+.|++|+++.|+.
T Consensus 36 ~~kI~IIG~-G~mG~slA~~L~~~G~~V~~~d~~~ 69 (304)
T PLN02256 36 KLKIGIVGF-GNFGQFLAKTFVKQGHTVLATSRSD 69 (304)
T ss_pred CCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECcc
Confidence 578999995 9999999999999999999988874
No 490
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=91.91 E-value=0.85 Score=39.08 Aligned_cols=70 Identities=16% Similarity=0.108 Sum_probs=48.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCE
Q 043777 2 AGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDV 76 (231)
Q Consensus 2 ~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~ 76 (231)
.+.+++.|+|+.| +|+--++.-.+-|++|+++++..++ +.+..+. -|.+.+..-..|++.+.++.+-.|.
T Consensus 180 ~pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~k--keea~~~--LGAd~fv~~~~d~d~~~~~~~~~dg 249 (360)
T KOG0023|consen 180 GPGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKK--KEEAIKS--LGADVFVDSTEDPDIMKAIMKTTDG 249 (360)
T ss_pred CCCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchh--HHHHHHh--cCcceeEEecCCHHHHHHHHHhhcC
Confidence 3578899999977 9998888888889999999997632 2333333 4555554444478777777665443
No 491
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=91.83 E-value=0.48 Score=35.13 Aligned_cols=32 Identities=22% Similarity=0.238 Sum_probs=26.9
Q ss_pred EEEEcCCChhHHHHHHHHHhCC--CCEEEEEcCC
Q 043777 7 VLVIGAIGRIGYHFTRRSIEYG--HPKFALIRDS 38 (231)
Q Consensus 7 ilVtGatG~iG~~i~~~L~~~g--~~v~~~~R~~ 38 (231)
|+|.|+||-||+..++-+.+.. ++|+.++-+.
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~ 34 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGS 34 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESS
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCC
Confidence 6799999999999999888876 7788777654
No 492
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=91.81 E-value=0.15 Score=37.77 Aligned_cols=31 Identities=29% Similarity=0.523 Sum_probs=26.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEE
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALI 35 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~ 35 (231)
.++|.|+|+ |.+|.+|.+.|.+.||.|..+.
T Consensus 10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~ 40 (127)
T PF10727_consen 10 RLKIGIIGA-GRVGTALARALARAGHEVVGVY 40 (127)
T ss_dssp --EEEEECT-SCCCCHHHHHHHHTTSEEEEES
T ss_pred ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEE
Confidence 578999998 9999999999999999988764
No 493
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.76 E-value=0.36 Score=40.78 Aligned_cols=51 Identities=22% Similarity=0.225 Sum_probs=41.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP 80 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p 80 (231)
+++++|+|+++.+|+.++..|.+.|..|+++.++. ..+.+.++++|+++..
T Consensus 158 Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t--------------------------~~l~~~~~~ADIVIsA 208 (286)
T PRK14175 158 GKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS--------------------------KDMASYLKDADVIVSA 208 (286)
T ss_pred CCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc--------------------------hhHHHHHhhCCEEEEC
Confidence 68999999999999999999999999998887542 1355677788887754
No 494
>PRK11259 solA N-methyltryptophan oxidase; Provisional
Probab=91.76 E-value=0.29 Score=42.46 Aligned_cols=33 Identities=27% Similarity=0.248 Sum_probs=30.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
-.|+|+|| |.+|..++.+|.+.|++|+++.|..
T Consensus 4 ~dv~IIGg-Gi~G~s~A~~L~~~g~~V~lie~~~ 36 (376)
T PRK11259 4 YDVIVIGL-GSMGSAAGYYLARRGLRVLGLDRFM 36 (376)
T ss_pred ccEEEECC-CHHHHHHHHHHHHCCCeEEEEeccc
Confidence 45899998 9999999999999999999998864
No 495
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=91.69 E-value=0.66 Score=40.83 Aligned_cols=34 Identities=26% Similarity=0.349 Sum_probs=30.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA 39 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~ 39 (231)
|||.|.|. |++|.....-|.+.||+|++++.+.+
T Consensus 1 MkI~viGt-GYVGLv~g~~lA~~GHeVv~vDid~~ 34 (414)
T COG1004 1 MKITVIGT-GYVGLVTGACLAELGHEVVCVDIDES 34 (414)
T ss_pred CceEEECC-chHHHHHHHHHHHcCCeEEEEeCCHH
Confidence 68999995 99999999999999999999998754
No 496
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=91.62 E-value=0.9 Score=37.66 Aligned_cols=64 Identities=27% Similarity=0.289 Sum_probs=44.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ 73 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~ 73 (231)
|+|+|.|||+ =|+.|++.|.++|+ |.+.+-.... .+..........+..+-+.+.+.+.+.+++
T Consensus 1 m~ILvlgGTt-E~r~la~~L~~~g~-v~~sv~t~~g---~~~~~~~~~~~~v~~G~lg~~~~l~~~l~~ 64 (249)
T PF02571_consen 1 MKILVLGGTT-EGRKLAERLAEAGY-VIVSVATSYG---GELLKPELPGLEVRVGRLGDEEGLAEFLRE 64 (249)
T ss_pred CEEEEEechH-HHHHHHHHHHhcCC-EEEEEEhhhh---HhhhccccCCceEEECCCCCHHHHHHHHHh
Confidence 6899999988 59999999999998 5543322211 111111114567788888899999998875
No 497
>PLN02353 probable UDP-glucose 6-dehydrogenase
Probab=91.57 E-value=0.41 Score=43.50 Aligned_cols=34 Identities=15% Similarity=-0.013 Sum_probs=29.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC--CCEEEEEcCC
Q 043777 4 KSNVLVIGAIGRIGYHFTRRSIEYG--HPKFALIRDS 38 (231)
Q Consensus 4 ~~~ilVtGatG~iG~~i~~~L~~~g--~~v~~~~R~~ 38 (231)
+|+|.|.|. |++|..++..|.+.| ++|++++++.
T Consensus 1 ~m~I~ViG~-GyvGl~~A~~lA~~g~g~~V~gvD~~~ 36 (473)
T PLN02353 1 MVKICCIGA-GYVGGPTMAVIALKCPDIEVVVVDISV 36 (473)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCeEEEEECCH
Confidence 368999986 999999999999885 7798888764
No 498
>PLN02602 lactate dehydrogenase
Probab=91.52 E-value=2.3 Score=37.10 Aligned_cols=72 Identities=13% Similarity=0.102 Sum_probs=43.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCC--CEEEEEcCCCCc-h-hhhhhhh--hcCCcEEEEEcCCCHHHHHHHHccCCEEE
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGH--PKFALIRDSASN-F-NFSLLRV--FHSGVFDYWGLLEDEKSLLEAVKQVDVRF 78 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~--~v~~~~R~~~~~-~-~~~~~~~--~~~~v~~~~~D~~d~~~l~~al~~~d~~f 78 (231)
+||.|+|+ |.+|+.++-.|+..+. ++.+++.+.... . ..++... +.....+ .+. .|. +.++++|++.
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i-~~~-~dy----~~~~daDiVV 110 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKI-LAS-TDY----AVTAGSDLCI 110 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEE-EeC-CCH----HHhCCCCEEE
Confidence 59999996 9999999999988874 577777765321 1 1111111 1112222 221 122 3478999988
Q ss_pred EcccC
Q 043777 79 IPSEY 83 (231)
Q Consensus 79 ~ps~~ 83 (231)
+.+..
T Consensus 111 itAG~ 115 (350)
T PLN02602 111 VTAGA 115 (350)
T ss_pred ECCCC
Confidence 86544
No 499
>KOG4288 consensus Predicted oxidoreductase [General function prediction only]
Probab=91.38 E-value=0.21 Score=40.73 Aligned_cols=34 Identities=18% Similarity=0.390 Sum_probs=31.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777 5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS 38 (231)
Q Consensus 5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~ 38 (231)
++..+.||+||+|+.|+..+...||++.-..|+.
T Consensus 3 ~k~~vfgg~gflg~~ic~~a~~sgy~vvsvsrsg 36 (283)
T KOG4288|consen 3 PKLIVFGGNGFLGKRICQEAVTSGYQVVSVSRSG 36 (283)
T ss_pred ccceeecccccchhhhhHHHHhcCceEEEecccc
Confidence 6788999999999999999999999998888865
No 500
>KOG2304 consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]
Probab=91.33 E-value=0.27 Score=40.06 Aligned_cols=38 Identities=24% Similarity=0.373 Sum_probs=33.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777 1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA 39 (231)
Q Consensus 1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~ 39 (231)
|.+.+.|.|.|| |..|+-|++-....|++|.+.+++.+
T Consensus 8 ~~~~~~V~ivGa-G~MGSGIAQv~a~sg~~V~l~d~~~~ 45 (298)
T KOG2304|consen 8 MAEIKNVAIVGA-GQMGSGIAQVAATSGLNVWLVDANED 45 (298)
T ss_pred cccccceEEEcc-cccchhHHHHHHhcCCceEEecCCHH
Confidence 455678999998 99999999999999999999998754
Done!