Your job contains 1 sequence.
>043780
MAALQYLESLRNDHPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYH
NFITDFETKINLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKM
QIAMFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKC
ALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIINSLTGTKVEWLYY
ILQAFNSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTI
PLSIIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRD
RLDSWLGKVHTALLSIEAETPDLVAS
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 043780
(386 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2171998 - symbol:AT5G45620 "AT5G45620" species... 1629 1.8e-167 1
TAIR|locus:504955552 - symbol:AT4G19006 "AT4G19006" speci... 1626 3.7e-167 1
DICTYBASE|DDB_G0285105 - symbol:psmD13 "26S proteasome no... 695 1.7e-68 1
ZFIN|ZDB-GENE-040426-1004 - symbol:psmd13 "proteasome (pr... 695 1.7e-68 1
RGD|1305236 - symbol:Psmd13 "proteasome (prosome, macropa... 663 4.1e-65 1
UNIPROTKB|Q5E964 - symbol:PSMD13 "26S proteasome non-ATPa... 662 5.2e-65 1
UNIPROTKB|Q9UNM6 - symbol:PSMD13 "26S proteasome non-ATPa... 661 6.7e-65 1
UNIPROTKB|E2R5N5 - symbol:PSMD13 "Uncharacterized protein... 659 1.1e-64 1
UNIPROTKB|F1RGC9 - symbol:PSMD13 "Uncharacterized protein... 656 2.3e-64 1
MGI|MGI:1345192 - symbol:Psmd13 "proteasome (prosome, mac... 651 7.6e-64 1
UNIPROTKB|P84169 - symbol:PSMD13 "26S proteasome non-ATPa... 650 9.7e-64 1
UNIPROTKB|G8JKV6 - symbol:PSMD13 "26S proteasome non-ATPa... 631 1.0e-61 1
FB|FBgn0028691 - symbol:Rpn9 "Regulatory particle non-ATP... 616 3.9e-60 1
UNIPROTKB|G4N7S1 - symbol:MGG_03524 "26S proteasome regul... 533 2.4e-51 1
ASPGD|ASPL0000013342 - symbol:AN3716 species:162425 "Emer... 524 2.2e-50 1
WB|WBGene00004465 - symbol:rpn-9 species:6239 "Caenorhabd... 477 2.1e-45 1
UNIPROTKB|Q22253 - symbol:rpn-9 "Protein RPN-9" species:6... 477 2.1e-45 1
UNIPROTKB|E1C2R6 - symbol:E1C2R6 "Uncharacterized protein... 280 2.6e-45 2
POMBASE|SPAC607.05 - symbol:rpn9 "19S proteasome regulato... 469 1.5e-44 1
SGD|S000002835 - symbol:RPN9 "Non-ATPase regulatory subun... 460 1.3e-43 1
GENEDB_PFALCIPARUM|PF10_0298 - symbol:PF10_0298 "26S prot... 357 1.1e-32 1
UNIPROTKB|Q8IJA0 - symbol:PF10_0298 "26S proteasome subun... 357 1.1e-32 1
CGD|CAL0002740 - symbol:orf19.1993 species:5476 "Candida ... 332 4.9e-30 1
FB|FBgn0033902 - symbol:Tango7 "Transport and Golgi organ... 136 3.1e-06 1
UNIPROTKB|Q292F0 - symbol:Tango7 "Eukaryotic translation ... 132 8.9e-06 1
TAIR|locus:2076517 - symbol:AT3G02200 "AT3G02200" species... 127 3.6e-05 1
UNIPROTKB|F1NGK0 - symbol:COPS7A "Uncharacterized protein... 119 0.00013 1
>TAIR|locus:2171998 [details] [associations]
symbol:AT5G45620 "AT5G45620" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006096 "glycolysis" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
[GO:0010498 "proteasomal protein catabolic process" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0046686 "response to cadmium ion" evidence=RCA]
[GO:0051604 "protein maturation" evidence=RCA] [GO:0051788
"response to misfolded protein" evidence=RCA] [GO:0080129
"proteasome core complex assembly" evidence=RCA] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 GO:GO:0005829 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000502 eggNOG:NOG272621
HOGENOM:HOG000216633 KO:K03039 OMA:INQVEQV ProtClustDB:CLSN2690225
EMBL:AY093136 EMBL:BT003384 EMBL:AY230841 IPI:IPI00516535
RefSeq:NP_199375.2 UniGene:At.23294 UniGene:At.74818
ProteinModelPortal:Q8RWF0 IntAct:Q8RWF0 STRING:Q8RWF0 PaxDb:Q8RWF0
PRIDE:Q8RWF0 EnsemblPlants:AT5G45620.1 GeneID:834602
KEGG:ath:AT5G45620 TAIR:At5g45620 InParanoid:Q8RWF0
PhylomeDB:Q8RWF0 ArrayExpress:Q8RWF0 Genevestigator:Q8RWF0
Uniprot:Q8RWF0
Length = 386
Score = 1629 (578.5 bits), Expect = 1.8e-167, P = 1.8e-167
Identities = 313/386 (81%), Positives = 343/386 (88%)
Query: 1 MAALQYLESLRNDHPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYH 60
MAALQYLESL+N HPELGEWYN+LADLYQKKLWHQLTLKLEQF+A AVFQAGDALIQ YH
Sbjct: 1 MAALQYLESLKNTHPELGEWYNSLADLYQKKLWHQLTLKLEQFIALAVFQAGDALIQFYH 60
Query: 61 NFITDFETKINLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKM 120
NFITDFETKINLLKLAHFAV+VSRQY EK+AA+SYLE VIEKLRAT E R EPI+YI+
Sbjct: 61 NFITDFETKINLLKLAHFAVVVSRQYSEKEAAVSYLESVIEKLRATKEPRITEPIIYIET 120
Query: 121 QIAMFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKC 180
Q A+FKLEQGD+KECKK+L+DGKS+LDSMTDIDPSVYAN+YWVSSQYHK QEF++FYK
Sbjct: 121 QKALFKLEQGDQKECKKILDDGKSSLDSMTDIDPSVYANFYWVSSQYHKCRQEFSDFYKS 180
Query: 181 ALLYLAYTSVEXXXXXXXXXXXXXXXXXXXXGDNIYNFGELLAHPIINSLTGTKVEWLYY 240
ALLYLAYTSVE G+NIYNFGELLAHPI+ SL GT VEWLY+
Sbjct: 181 ALLYLAYTSVEDLSESFKLDLAFDLSLSALLGENIYNFGELLAHPILKSLLGTNVEWLYH 240
Query: 241 ILQAFNSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTI 300
ILQAFN GDLV+YQELCRVHNA+L AQPALVENEKKLLEKINILCL+EIIFSRP+EDRTI
Sbjct: 241 ILQAFNHGDLVQYQELCRVHNASLIAQPALVENEKKLLEKINILCLIEIIFSRPAEDRTI 300
Query: 301 PLSIIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRD 360
PLSIIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQV GT++VSW QPRVLGIPQIK+LRD
Sbjct: 301 PLSIIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVNGTIYVSWAQPRVLGIPQIKALRD 360
Query: 361 RLDSWLGKVHTALLSIEAETPDLVAS 386
+LDSW+ KVHT LLS+EAETPDLVA+
Sbjct: 361 QLDSWVDKVHTTLLSVEAETPDLVAA 386
>TAIR|locus:504955552 [details] [associations]
symbol:AT4G19006 "AT4G19006" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=ISS] [GO:0005634 "nucleus"
evidence=TAS] [GO:0030163 "protein catabolic process" evidence=TAS]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0005829 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0030163 GO:GO:0000502
eggNOG:NOG272621 HOGENOM:HOG000216633 KO:K03039 OMA:LAHPILE
EMBL:AY230842 EMBL:AK117761 IPI:IPI00529601 RefSeq:NP_680721.2
UniGene:At.21756 ProteinModelPortal:Q8GYA6 IntAct:Q8GYA6
STRING:Q8GYA6 PaxDb:Q8GYA6 PRIDE:Q8GYA6 EnsemblPlants:AT4G19006.1
GeneID:827638 KEGG:ath:AT4G19006 TAIR:At4g19006 InParanoid:Q8GYA6
PhylomeDB:Q8GYA6 ProtClustDB:CLSN2690225 Genevestigator:Q8GYA6
Uniprot:Q8GYA6
Length = 386
Score = 1626 (577.4 bits), Expect = 3.7e-167, P = 3.7e-167
Identities = 311/386 (80%), Positives = 344/386 (89%)
Query: 1 MAALQYLESLRNDHPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYH 60
MAALQYLES +N HPELGEWYN+LADLYQKKLWHQLTLKLEQF+A +VFQAGDALIQLY+
Sbjct: 1 MAALQYLESQKNAHPELGEWYNSLADLYQKKLWHQLTLKLEQFIALSVFQAGDALIQLYN 60
Query: 61 NFITDFETKINLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKM 120
NFITDFET+INLLKLAHFAV+VSRQYPEK+AA+SYLEGVIEKL+AT E R EPI YI+
Sbjct: 61 NFITDFETRINLLKLAHFAVVVSRQYPEKEAAVSYLEGVIEKLKATKESRINEPISYIET 120
Query: 121 QIAMFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKC 180
QIA+FKLEQGD+KECKK+L+DGKS LDSMTDIDPSVYAN++WVSSQYHK QEF+EFYK
Sbjct: 121 QIALFKLEQGDQKECKKILDDGKSLLDSMTDIDPSVYANFFWVSSQYHKVRQEFSEFYKN 180
Query: 181 ALLYLAYTSVEXXXXXXXXXXXXXXXXXXXXGDNIYNFGELLAHPIINSLTGTKVEWLYY 240
ALLYLAYTSV+ G+NIYNFGELLAHPI+ SL GT VEWLY+
Sbjct: 181 ALLYLAYTSVDSLSESFKLDLAFDLSLSALLGENIYNFGELLAHPILKSLLGTNVEWLYH 240
Query: 241 ILQAFNSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTI 300
ILQAFN GDLV+YQELCRVHNA+L AQPALVENEKKLLEKINILCL+EIIFSRP+EDRTI
Sbjct: 241 ILQAFNHGDLVQYQELCRVHNASLSAQPALVENEKKLLEKINILCLIEIIFSRPAEDRTI 300
Query: 301 PLSIIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRD 360
PLS+IAERTKLSIEDVEHLLMKSLSVHLIEGI+DQV GTV+VSW QPRVLGIPQIKSLRD
Sbjct: 301 PLSVIAERTKLSIEDVEHLLMKSLSVHLIEGILDQVNGTVYVSWAQPRVLGIPQIKSLRD 360
Query: 361 RLDSWLGKVHTALLSIEAETPDLVAS 386
+LDSW+ KVHT LLS+EAETPDLVA+
Sbjct: 361 QLDSWVDKVHTTLLSVEAETPDLVAA 386
>DICTYBASE|DDB_G0285105 [details] [associations]
symbol:psmD13 "26S proteasome non-ATPase regulatory
subunit 13" species:44689 "Dictyostelium discoideum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
dictyBase:DDB_G0285105 GenomeReviews:CM000153_GR GO:GO:0004175
GO:GO:0006511 EMBL:AAFI02000074 GO:GO:0005838 eggNOG:NOG272621
KO:K03039 RefSeq:XP_639866.1 STRING:Q54NQ0
EnsemblProtists:DDB0233004 GeneID:8624937 KEGG:ddi:DDB_G0285105
OMA:LAHPILE ProtClustDB:CLSZ2430421 Uniprot:Q54NQ0
Length = 385
Score = 695 (249.7 bits), Expect = 1.7e-68, P = 1.7e-68
Identities = 145/385 (37%), Positives = 222/385 (57%)
Query: 4 LQYLESLRNDHPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFI 63
L+YLE L+ P+L + N + D Y+ KLWHQLT ++E + L Y NFI
Sbjct: 7 LEYLEHLKKIVPDLSDQINNIKDTYENKLWHQLTKQIEMIIISPQLLEKKELFNFYTNFI 66
Query: 64 TDFETKINLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIA 123
DFE K+ L L + V+RQ+ ++ ++E + +K++ + K IL + IA
Sbjct: 67 RDFENKLRPLSLVEICIAVARQFDTDESR-KFIETISQKVK----KDKSAYILTLSY-IA 120
Query: 124 MFKLEQG---DRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKC 180
L G ++CKK LE K L +T +D VY+++Y VS+ YH + +EFYK
Sbjct: 121 NMNLRSGVAEQLQDCKKTLELAKEELQGVTGLDTIVYSSFYRVSTDYHMAKSQASEFYKN 180
Query: 181 ALLYLAYTSVEXXXXXXXXXXXXXXXXXXXXGDNIYNFGELLAHPIINSLTGTKVEWLYY 240
AL+YL+Y +E G+N+Y FG+L+A+PI+ +L G++ WL
Sbjct: 181 ALMYLSYCKLETISQEEQASLAYNLCIAALVGENVYGFGDLIANPILKALEGSQHNWLIA 240
Query: 241 ILQAFNSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTI 300
L+AFN GD+ +++ L H + Q A+ N +KL +KI+IL L+E+ F PS+ R+I
Sbjct: 241 FLKAFNIGDIQQFEGLMSQHRDIISTQTAITNNMQKLRQKISILSLLELAFRTPSDKRSI 300
Query: 301 PLSIIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRD 360
S IA+ TKL + ++EHLLMKSLS++LI+G IDQ +H++WV PR+L + QI S+ +
Sbjct: 301 SFSKIAQATKLPLGEIEHLLMKSLSLNLIKGSIDQTVEIIHITWVTPRILDLNQINSMNN 360
Query: 361 RLDSWLGKVHTALLSIEAETPDLVA 385
R+ W K T+L +E +T DLVA
Sbjct: 361 RIAEWTEKAKTSLRLVEDDTVDLVA 385
>ZFIN|ZDB-GENE-040426-1004 [details] [associations]
symbol:psmd13 "proteasome (prosome, macropain) 26S
subunit, non-ATPase, 13" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
ZFIN:ZDB-GENE-040426-1004 GO:GO:0000502 HOGENOM:HOG000216633
HOVERGEN:HBG053740 EMBL:AY398402 IPI:IPI00497953 UniGene:Dr.25959
STRING:Q6TGV4 PRIDE:Q6TGV4 ArrayExpress:Q6TGV4 Bgee:Q6TGV4
Uniprot:Q6TGV4
Length = 413
Score = 695 (249.7 bits), Expect = 1.7e-68, P = 1.7e-68
Identities = 148/371 (39%), Positives = 217/371 (58%)
Query: 15 PELG-EWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITDFETKINLL 73
PE+ EW++ L D Y +KLWHQLTLKL FV F GD LIQLY NF+ DFE +IN L
Sbjct: 53 PEIAAEWHS-LEDFYNRKLWHQLTLKLTVFVQDPYFAKGDGLIQLYENFLCDFEHRINPL 111
Query: 74 KLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIAMFKLEQGDRK 133
L + V+RQ + AI++LE EK++A+ +E ++ K I KL+ D
Sbjct: 112 SLVEIILHVARQMQDPNTAITFLEKTKEKVKAS-----DEAVILCKTSIGSLKLDISDLP 166
Query: 134 ECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLYLAYTSVEXX 193
KKL+E+ + L+++ + SV+ +Y +SS+Y++ A +YK AL YL +
Sbjct: 167 ATKKLIEEVEEMLNNLPGVT-SVHGRFYDLSSKYYRIIGNHALYYKDALRYLGCVEAKDL 225
Query: 194 XXXXXXXXXXXXXXXXXXGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRY 253
G+ +YNFGELL HP++ SL T +WL L AFN+G++ ++
Sbjct: 226 PEAEQQERAFTLGLAGLLGEGVYNFGELLMHPVLESLRNTDKQWLIDTLFAFNAGNVEKF 285
Query: 254 QELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLSI 313
Q L A QP L E KL++KI +LC+ME+ F+RP+ +R + IA+ K+ +
Sbjct: 286 QAL----KTAWGQQPDLAAQEAKLMQKIQLLCVMEMTFTRPANNRQLSFQEIAQSAKIQV 341
Query: 314 EDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSWLGKVHTAL 373
+VE L+MK+LSV LI+G ID+VE VH++WVQPRVL + QIK ++DRLD W G V
Sbjct: 342 NEVELLVMKALSVGLIKGSIDEVEKKVHMTWVQPRVLDVQQIKGMKDRLDFWCGDVKNMA 401
Query: 374 LSIEAETPDLV 384
+ +E D++
Sbjct: 402 VLVEQRAQDIL 412
>RGD|1305236 [details] [associations]
symbol:Psmd13 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 13" species:10116 "Rattus norvegicus" [GO:0005838
"proteasome regulatory particle" evidence=IEA;ISO] [GO:0007127
"meiosis I" evidence=IEA;ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 RGD:1305236 GO:GO:0007127 EMBL:CH473953 GO:GO:0022624
GO:GO:0005838 CTD:5719 eggNOG:NOG272621 HOGENOM:HOG000216633
KO:K03039 OrthoDB:EOG42JNRJ OMA:LAHPILE
GeneTree:ENSGT00390000001802 EMBL:BC158732 IPI:IPI00202283
RefSeq:NP_001102395.1 UniGene:Rn.16918 IntAct:B0BN93 STRING:B0BN93
PhosphoSite:B0BN93 World-2DPAGE:0004:B0BN93 PRIDE:B0BN93
Ensembl:ENSRNOT00000019642 GeneID:365388 KEGG:rno:365388
UCSC:RGD:1305236 NextBio:687344 Genevestigator:B0BN93
Uniprot:B0BN93
Length = 376
Score = 663 (238.4 bits), Expect = 4.1e-65, P = 4.1e-65
Identities = 141/379 (37%), Positives = 221/379 (58%)
Query: 6 YLESLRNDHPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITD 65
+L+ ++ P ++ L +LY KKLWHQLTL++ FV F GD LI+LY NFI++
Sbjct: 7 FLQQSQSSGPGQAAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISE 66
Query: 66 FETKINLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIAMF 125
FE ++N L L + V RQ + A+++LE EK++++ +E ++ K I
Sbjct: 67 FEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSS-----DEAVILCKTAIGAL 121
Query: 126 KLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLYL 185
KL GD + K+ +ED + L+++ + SV++ +Y +SS+Y++ A +YK AL +L
Sbjct: 122 KLNIGDLQATKETIEDVEEMLNNLPGVT-SVHSRFYDLSSKYYQTIGNHASYYKDALRFL 180
Query: 186 AYTSVEXXXXXXXXXXXXXXXXXXXXGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAF 245
++ G+ ++NFGELL HP++ SL T +WL L AF
Sbjct: 181 GCVDIKDLPVSEQQERAFTLGLAGLLGEGVFNFGELLMHPVLESLRNTDRQWLIDTLYAF 240
Query: 246 NSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSII 305
NSGD+ R+Q L +A QP L NE +LL KI +LCLME+ F+RP+ R + I
Sbjct: 241 NSGDVDRFQTL----KSAWGQQPDLAANEAQLLRKIQLLCLMEMTFTRPANHRQLTFEEI 296
Query: 306 AERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSW 365
A+ K+++ VE L+MK+LSV L+ G ID+V+ VH++WVQPRVL + QIK ++DRL+ W
Sbjct: 297 AKSAKITVNKVELLVMKALSVGLVRGSIDEVDKRVHMTWVQPRVLDLQQIKGMKDRLELW 356
Query: 366 LGKVHTALLSIEAETPDLV 384
V + L +E + D++
Sbjct: 357 CTDVKSMELLVEHQAQDIL 375
>UNIPROTKB|Q5E964 [details] [associations]
symbol:PSMD13 "26S proteasome non-ATPase regulatory subunit
13" species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0022624 EMBL:BT021056 EMBL:BC102200
IPI:IPI00718435 RefSeq:NP_001019703.1 UniGene:Bt.21635
STRING:Q5E964 PRIDE:Q5E964 GeneID:513525 KEGG:bta:513525 CTD:5719
eggNOG:NOG272621 HOGENOM:HOG000216633 HOVERGEN:HBG053740
InParanoid:Q5E964 KO:K03039 OrthoDB:EOG42JNRJ NextBio:20870894
Uniprot:Q5E964
Length = 376
Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
Identities = 141/379 (37%), Positives = 220/379 (58%)
Query: 6 YLESLRNDHPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITD 65
+L+ ++ P ++ L +LY KKLWHQLTL++ FV F GD LI+LY NFI++
Sbjct: 7 FLQQSQSSGPGQAAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISE 66
Query: 66 FETKINLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIAMF 125
FE ++N L L + V RQ + A+S+LE EK++++ +E ++ K I
Sbjct: 67 FEHRVNPLSLVEIILHVVRQMTDPNVALSFLEKTREKVKSS-----DEAVILCKTAIGAL 121
Query: 126 KLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLYL 185
KL GD + K+ +ED + L ++ + SV++ +Y +SS+Y++ A +YK AL +L
Sbjct: 122 KLNIGDLQVTKETIEDVEEMLSNLPGVT-SVHSRFYDLSSKYYQTIGNHASYYKDALRFL 180
Query: 186 AYTSVEXXXXXXXXXXXXXXXXXXXXGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAF 245
++ GD ++NFGELL HP++ SL T +WL L AF
Sbjct: 181 GCVDIKDLPVSEQQERAFTLGLAGLLGDGVFNFGELLMHPVLESLRDTDRQWLIDTLYAF 240
Query: 246 NSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSII 305
NSG++ R+Q L A QP L NE +LL KI +LCLME+ F+RP+ R + I
Sbjct: 241 NSGNVERFQTL----KTAWGQQPDLAANEAQLLRKIQLLCLMEMTFTRPANHRQLTFEEI 296
Query: 306 AERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSW 365
A K+++ +VE L+MK+LSV L++G ID+V+ VH++WVQPRVL + QIK ++DRL+ W
Sbjct: 297 ARSAKITVNEVELLVMKALSVGLVKGSIDEVDKRVHMTWVQPRVLDLQQIKGMKDRLEFW 356
Query: 366 LGKVHTALLSIEAETPDLV 384
V + + +E + D++
Sbjct: 357 CTDVKSMEMLVEHQAHDIL 375
>UNIPROTKB|Q9UNM6 [details] [associations]
symbol:PSMD13 "26S proteasome non-ATPase regulatory subunit
13" species:9606 "Homo sapiens" [GO:0005838 "proteasome regulatory
particle" evidence=IEA] [GO:0007127 "meiosis I" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=TAS] [GO:0000075 "cell
cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=TAS] [GO:0000084 "S phase of mitotic
cell cycle" evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005829 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0044281
GO:GO:0000082 GO:GO:0051436 GO:GO:0000216 GO:GO:0007127
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:AC136475 GO:GO:0006521 Reactome:REACT_383 EMBL:CH471278
GO:GO:0005838 CTD:5719 eggNOG:NOG272621 HOGENOM:HOG000216633
HOVERGEN:HBG053740 KO:K03039 OrthoDB:EOG42JNRJ EMBL:AB009398
EMBL:AF107837 EMBL:AF086708 EMBL:BT007307 EMBL:AK094775
EMBL:BC001100 EMBL:BC001747 IPI:IPI00375380 IPI:IPI00549672
RefSeq:NP_002808.3 RefSeq:NP_787128.2 UniGene:Hs.134688
ProteinModelPortal:Q9UNM6 DIP:DIP-27576N IntAct:Q9UNM6
MINT:MINT-1161305 STRING:Q9UNM6 PhosphoSite:Q9UNM6 DMDM:20978558
PaxDb:Q9UNM6 PRIDE:Q9UNM6 DNASU:5719 Ensembl:ENST00000431206
Ensembl:ENST00000532097 GeneID:5719 KEGG:hsa:5719 UCSC:uc001lol.2
UCSC:uc001loo.2 GeneCards:GC11P000226 H-InvDB:HIX0009340
HGNC:HGNC:9558 HPA:HPA038692 MIM:603481 neXtProt:NX_Q9UNM6
PharmGKB:PA33904 InParanoid:Q9UNM6 OMA:INQVEQV PhylomeDB:Q9UNM6
ChiTaRS:PSMD13 GenomeRNAi:5719 NextBio:22226 ArrayExpress:Q9UNM6
Bgee:Q9UNM6 CleanEx:HS_PSMD13 Genevestigator:Q9UNM6
GermOnline:ENSG00000185627 Uniprot:Q9UNM6
Length = 376
Score = 661 (237.7 bits), Expect = 6.7e-65, P = 6.7e-65
Identities = 140/379 (36%), Positives = 222/379 (58%)
Query: 6 YLESLRNDHPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITD 65
+L+ +N P ++ L +LY KKLWHQLTL++ FV F GD LI+LY NFI++
Sbjct: 7 FLQQSQNSGPGQPAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISE 66
Query: 66 FETKINLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIAMF 125
FE ++N L L + V RQ + A+++LE EK++++ +E ++ K I
Sbjct: 67 FEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSS-----DEAVILCKTAIGAL 121
Query: 126 KLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLYL 185
KL GD + K+ +ED + L+++ + SV++ +Y +SS+Y++ A +YK AL +L
Sbjct: 122 KLNIGDLQVTKETIEDVEEMLNNLPGVT-SVHSRFYDLSSKYYQTIGNHASYYKDALRFL 180
Query: 186 AYTSVEXXXXXXXXXXXXXXXXXXXXGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAF 245
++ G+ ++NFGELL HP++ SL T +WL L AF
Sbjct: 181 GCVDIKDLPVSEQQERAFTLGLAGLLGEGVFNFGELLMHPVLESLRNTDRQWLIDTLYAF 240
Query: 246 NSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSII 305
NSG++ R+Q L A QP L NE +LL KI +LCLME+ F+RP+ R + I
Sbjct: 241 NSGNVERFQTL----KTAWGQQPDLAANEAQLLRKIQLLCLMEMTFTRPANHRQLTFEEI 296
Query: 306 AERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSW 365
A+ K+++ +VE L+MK+LSV L++G ID+V+ VH++WVQPRVL + QIK ++DRL+ W
Sbjct: 297 AKSAKITVNEVELLVMKALSVGLVKGSIDEVDKRVHMTWVQPRVLDLQQIKGMKDRLEFW 356
Query: 366 LGKVHTALLSIEAETPDLV 384
V + + +E + D++
Sbjct: 357 CTDVKSMEMLVEHQAHDIL 375
>UNIPROTKB|E2R5N5 [details] [associations]
symbol:PSMD13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007127 "meiosis I" evidence=IEA] [GO:0005838
"proteasome regulatory particle" evidence=IEA] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 GO:GO:0007127 GO:GO:0005838 CTD:5719
KO:K03039 OMA:LAHPILE GeneTree:ENSGT00390000001802
EMBL:AAEX03011305 RefSeq:XP_848457.1 ProteinModelPortal:E2R5N5
Ensembl:ENSCAFT00000039828 GeneID:475934 KEGG:cfa:475934
NextBio:20851679 Uniprot:E2R5N5
Length = 376
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 139/379 (36%), Positives = 222/379 (58%)
Query: 6 YLESLRNDHPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITD 65
+L+ ++ P ++ L +LY KKLWHQLTL++ FV F GD LI+LY NFI++
Sbjct: 7 FLQQSQSSGPGQAAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISE 66
Query: 66 FETKINLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIAMF 125
FE ++N L L + V RQ + A+++LE EK++++ +E ++ K I
Sbjct: 67 FEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSS-----DEAVILCKTAIGAL 121
Query: 126 KLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLYL 185
KL GD + K+ +ED + L+++ + SV++ +Y +SS+Y++ A +YK AL +L
Sbjct: 122 KLNIGDLQVTKETIEDVEEMLNNLPGVT-SVHSRFYDLSSKYYQTIGNHASYYKDALRFL 180
Query: 186 AYTSVEXXXXXXXXXXXXXXXXXXXXGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAF 245
++ G+ ++NFGELL HP++ SL T +WL L AF
Sbjct: 181 GCVDIKDLPVSEQQERAFTLGLAGLLGEGVFNFGELLMHPVLESLRSTDRQWLIDTLYAF 240
Query: 246 NSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSII 305
NSG++ R+Q L A QP L NE +LL KI +LCLME+ F+RP+ R + I
Sbjct: 241 NSGNVERFQTL----KTAWGQQPDLAANEAQLLRKIQLLCLMEMTFTRPANHRQLTFEEI 296
Query: 306 AERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSW 365
A+ K+++ +VE L+MK+LSV L++G ID+V+ VH++WVQPRVL + QIK ++DRL+ W
Sbjct: 297 AKSAKITVNEVELLVMKALSVGLVKGSIDEVDKRVHMTWVQPRVLDLQQIKGMKDRLEFW 356
Query: 366 LGKVHTALLSIEAETPDLV 384
V + + +E + D++
Sbjct: 357 CTDVRSMEMLVEHQAHDIL 375
>UNIPROTKB|F1RGC9 [details] [associations]
symbol:PSMD13 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007127 "meiosis I" evidence=IEA] [GO:0005838
"proteasome regulatory particle" evidence=IEA] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 GO:GO:0007127 GO:GO:0005838 KO:K03039
OMA:LAHPILE GeneTree:ENSGT00390000001802 EMBL:CU928488
RefSeq:XP_003124275.1 UniGene:Ssc.55246 Ensembl:ENSSSCT00000015909
GeneID:100517815 KEGG:ssc:100517815 Uniprot:F1RGC9
Length = 376
Score = 656 (236.0 bits), Expect = 2.3e-64, P = 2.3e-64
Identities = 139/379 (36%), Positives = 221/379 (58%)
Query: 6 YLESLRNDHPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITD 65
+L+ ++ P ++ L +LY KKLWHQLTL++ FV F GD LI+LY NFI++
Sbjct: 7 FLQQSQSSGPGQAAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISE 66
Query: 66 FETKINLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIAMF 125
FE ++N L L + V RQ + A+++LE EK++++ +E ++ K I
Sbjct: 67 FEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSS-----DEAVILCKTAIGAL 121
Query: 126 KLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLYL 185
KL GD + K+ +ED + L S+ + SV++ +Y +SS+Y++ A +YK AL +L
Sbjct: 122 KLNIGDLQVTKETIEDVEEMLSSLPGVT-SVHSRFYDLSSKYYQTIGNHASYYKDALRFL 180
Query: 186 AYTSVEXXXXXXXXXXXXXXXXXXXXGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAF 245
++ G+ ++NFGELL HP++ SL T +WL L AF
Sbjct: 181 GCVDIKDLPVSEQQERAFTLGLAGLLGEGVFNFGELLMHPVLESLRDTDRQWLIDTLYAF 240
Query: 246 NSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSII 305
NSG++ R+Q L A QP L NE +LL KI +LCLME+ F+RP+ R + I
Sbjct: 241 NSGNVERFQTL----KTAWGQQPDLAANEAQLLRKIQLLCLMEMTFTRPANHRQLTFEEI 296
Query: 306 AERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSW 365
A+ K+++ +VE L+MK+LSV L++G ID+V+ VH++WVQPRVL + QI+ ++DRL+ W
Sbjct: 297 AKSAKITVNEVELLVMKALSVGLVKGSIDEVDKRVHMTWVQPRVLDLQQIRGMKDRLEFW 356
Query: 366 LGKVHTALLSIEAETPDLV 384
V + + +E + D++
Sbjct: 357 CTDVKSMEMLVEHQAHDIL 375
>MGI|MGI:1345192 [details] [associations]
symbol:Psmd13 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 13" species:10090 "Mus musculus" [GO:0000502
"proteasome complex" evidence=IEA] [GO:0004175 "endopeptidase
activity" evidence=ISA] [GO:0005838 "proteasome regulatory
particle" evidence=IDA] [GO:0007127 "meiosis I" evidence=IMP]
[GO:0008152 "metabolic process" evidence=ISA] [GO:0022624
"proteasome accessory complex" evidence=IDA] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 MGI:MGI:1345192 GO:GO:0004175
GO:GO:0007127 GO:GO:0005838 CTD:5719 eggNOG:NOG272621
HOGENOM:HOG000216633 HOVERGEN:HBG053740 KO:K03039 OrthoDB:EOG42JNRJ
OMA:LAHPILE ChiTaRS:PSMD13 EMBL:AF107838 EMBL:AK051078
EMBL:AK075936 EMBL:AK081160 EMBL:AK145654 EMBL:AK163017
EMBL:AK167169 EMBL:AK171504 IPI:IPI00126048 RefSeq:NP_036005.1
UniGene:Mm.29760 ProteinModelPortal:Q9WVJ2 IntAct:Q9WVJ2
STRING:Q9WVJ2 PhosphoSite:Q9WVJ2 PaxDb:Q9WVJ2 PRIDE:Q9WVJ2
Ensembl:ENSMUST00000026560 GeneID:23997 KEGG:mmu:23997
GeneTree:ENSGT00390000001802 InParanoid:Q9WVJ2 NextBio:303913
Bgee:Q9WVJ2 Genevestigator:Q9WVJ2 GermOnline:ENSMUSG00000025487
Uniprot:Q9WVJ2
Length = 376
Score = 651 (234.2 bits), Expect = 7.6e-64, P = 7.6e-64
Identities = 139/379 (36%), Positives = 219/379 (57%)
Query: 6 YLESLRNDHPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITD 65
+L+ ++ P ++ L +LY KKLWHQLTL++ FV F GD LI+LY NFI++
Sbjct: 7 FLQQSQSSGPGQAAVWHRLEELYTKKLWHQLTLEVLDFVQDPCFAQGDGLIKLYENFISE 66
Query: 66 FETKINLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIAMF 125
FE ++N L L + V RQ + A+++LE EK++++ +E ++ K I
Sbjct: 67 FEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSS-----DEAVILCKTAIGAL 121
Query: 126 KLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLYL 185
KL GD + K+ +ED + L+++ + SV++ +Y +SS+Y++ A +YK AL +L
Sbjct: 122 KLNIGDLQATKETIEDVEEMLNNLPGVT-SVHSRFYDLSSKYYQTIGNHASYYKDALRFL 180
Query: 186 AYTSVEXXXXXXXXXXXXXXXXXXXXGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAF 245
++ G+ ++NFGELL HP++ SL T +WL L AF
Sbjct: 181 GCVDIKDLPVSEQQERAFTLGLAGLLGEGVFNFGELLMHPVLESLRDTDRQWLIDTLYAF 240
Query: 246 NSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSII 305
NSG + R+Q L A QP L NE +LL KI +LCLME+ F+RP+ R + I
Sbjct: 241 NSGAVDRFQTL----KCAWGQQPDLAANEAQLLRKIQLLCLMEMTFTRPANHRQLTFEEI 296
Query: 306 AERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSW 365
A+ K+++ VE L+MK+LSV L+ G ID+V+ VH++WVQPRVL + QIK ++DRL+ W
Sbjct: 297 AKSAKITVNKVELLVMKALSVGLVRGSIDEVDKRVHMTWVQPRVLDLQQIKGMKDRLELW 356
Query: 366 LGKVHTALLSIEAETPDLV 384
V + + +E + D++
Sbjct: 357 CTDVKSMEMLVEHQAQDIL 375
>UNIPROTKB|P84169 [details] [associations]
symbol:PSMD13 "26S proteasome non-ATPase regulatory subunit
13" species:9031 "Gallus gallus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0022624 HOVERGEN:HBG053740 EMBL:CB017092
EMBL:CN218176 EMBL:BU427099 IPI:IPI00601716 Uniprot:P84169
Length = 376
Score = 650 (233.9 bits), Expect = 9.7e-64, P = 9.7e-64
Identities = 139/379 (36%), Positives = 222/379 (58%)
Query: 6 YLESLRNDHPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITD 65
+L+ ++ P ++ L +LY KKLWHQLTL++ FV F GD LI+LY NFI++
Sbjct: 7 FLQQSQSAGPGQAAVWHRLEELYNKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISE 66
Query: 66 FETKINLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIAMF 125
FE ++N L L + V RQ + A+++LE EK++++ +E ++ K I
Sbjct: 67 FEHRVNPLSLVEIILHVVRQMTDPTVALTFLEKTREKVKSS-----DEAVILCKTAIGAL 121
Query: 126 KLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLYL 185
KL GD + K+ +E+ + L+++ + SV++ +Y +SS+Y++ A +YK AL +L
Sbjct: 122 KLNIGDLQVTKETIEEVEEMLNNLPGVT-SVHSRFYDLSSKYYQTIGNHASYYKDALRFL 180
Query: 186 AYTSVEXXXXXXXXXXXXXXXXXXXXGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAF 245
V+ G+ +YNFGELL HP++ SL T +WL L AF
Sbjct: 181 GCIDVKDLPVSEQQERAFTLGLAGLLGEGVYNFGELLMHPVLESLRSTDRQWLIDTLYAF 240
Query: 246 NSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSII 305
NSG++ +Q L +A QP L NE LL+KI +LCLME+ F+RP+ R + I
Sbjct: 241 NSGNVETFQAL----KSAWGQQPDLAANEALLLQKIQLLCLMEMTFTRPANHRQLTFEEI 296
Query: 306 AERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSW 365
A+ K+++ +VE L+MK+LSV L++G ID+V+ VH++WVQPRVL + QIK ++DRL+ W
Sbjct: 297 AKSAKVTVNEVELLVMKALSVGLVKGSIDEVDKRVHMTWVQPRVLDLQQIKGMKDRLEFW 356
Query: 366 LGKVHTALLSIEAETPDLV 384
V + + +E + D++
Sbjct: 357 CTDVRSMEMLVEHQAHDIL 375
>UNIPROTKB|G8JKV6 [details] [associations]
symbol:PSMD13 "26S proteasome non-ATPase regulatory subunit
13" species:9913 "Bos taurus" [GO:0007127 "meiosis I" evidence=IEA]
[GO:0005838 "proteasome regulatory particle" evidence=IEA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 GO:GO:0007127
GO:GO:0005838 OMA:LAHPILE GeneTree:ENSGT00390000001802
EMBL:DAAA02032478 EMBL:DAAA02032479 Ensembl:ENSBTAT00000002650
Uniprot:G8JKV6
Length = 345
Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
Identities = 134/354 (37%), Positives = 207/354 (58%)
Query: 31 KLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITDFETKINLLKLAHFAVIVSRQYPEKQ 90
+LWHQLTL++ FV F GD LI+LY NFI++FE ++N L L + V RQ +
Sbjct: 1 RLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISEFEHRVNPLSLVEIILHVVRQMTDPN 60
Query: 91 AAISYLEGVIEKLRATNEQRKEEPILYIKMQIAMFKLEQGDRKECKKLLEDGKSTLDSMT 150
A+S+LE EK++++ +E ++ K I KL GD + K+ +ED + L ++
Sbjct: 61 VALSFLEKTREKVKSS-----DEAVILCKTAIGALKLNIGDLQVTKETIEDVEEMLSNLP 115
Query: 151 DIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLYLAYTSVEXXXXXXXXXXXXXXXXXXX 210
+ SV++ +Y +SS+Y++ A +YK AL +L ++
Sbjct: 116 GVT-SVHSRFYDLSSKYYQTIGNHASYYKDALRFLGCVDIKDLPVSEQQERAFTLGLAGL 174
Query: 211 XGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRYQELCRVHNAALRAQPAL 270
GD ++NFGELL HP++ SL T +WL L AFNSG++ R+Q L A QP L
Sbjct: 175 LGDGVFNFGELLMHPVLESLRDTDRQWLIDTLYAFNSGNVERFQTL----KTAWGQQPDL 230
Query: 271 VENEKKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLSIEDVEHLLMKSLSVHLIE 330
NE +LL KI +LCLME+ F+RP+ R + IA K+++ +VE L+MK+LSV L++
Sbjct: 231 AANEAQLLRKIQLLCLMEMTFTRPANHRQLTFEEIARSAKITVNEVELLVMKALSVGLVK 290
Query: 331 GIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSWLGKVHTALLSIEAETPDLV 384
G ID+V+ VH++WVQPRVL + QIK ++DRL+ W V + + +E + D++
Sbjct: 291 GSIDEVDKRVHMTWVQPRVLDLQQIKGMKDRLEFWCTDVKSMEMLVEHQAHDIL 344
>FB|FBgn0028691 [details] [associations]
symbol:Rpn9 "Regulatory particle non-ATPase 9" species:7227
"Drosophila melanogaster" [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0004175 "endopeptidase activity"
evidence=IDA] [GO:0007096 "regulation of exit from mitosis"
evidence=IMP] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
EMBL:AE014297 GO:GO:0006508 GO:GO:0004175 GO:GO:0008541
eggNOG:NOG272621 KO:K03039 OMA:LAHPILE GeneTree:ENSGT00390000001802
EMBL:AF145311 EMBL:AY061232 RefSeq:NP_651177.1 RefSeq:NP_732899.1
UniGene:Dm.3423 IntAct:Q7KMP8 STRING:Q7KMP8
EnsemblMetazoa:FBtr0084469 EnsemblMetazoa:FBtr0084470 GeneID:42802
KEGG:dme:Dmel_CG10230 UCSC:CG10230-RA CTD:42802 FlyBase:FBgn0028691
InParanoid:Q7KMP8 OrthoDB:EOG4K0P3Z GenomeRNAi:42802 NextBio:830641
Uniprot:Q7KMP8
Length = 382
Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
Identities = 131/360 (36%), Positives = 212/360 (58%)
Query: 11 RNDHPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITDFETKI 70
+ + EL + + +LY +KLW++LT+KL FV H Q AL+QLY NF++ FETKI
Sbjct: 17 KTTNKELAAEWTLIEELYNEKLWNELTIKLVTFVRHESLQDETALLQLYQNFLSTFETKI 76
Query: 71 NLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIK-MQIAMFKLEQ 129
N L +V +K+ AI +LE + +K++ +E + Y++ MQ ++
Sbjct: 77 NPYGLIQILEVVVDNIGDKKEAIEFLEKMKDKVKIC-----DEAVWYLQVMQGNLYLSNL 131
Query: 130 GDRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLYLAYTS 189
D KK++E+ + L+ ++ P V+ YY ++SQY++ + +++Y+C L +L S
Sbjct: 132 NDLNATKKIIEELRDVLEEAGNVTP-VHGKYYMLASQYYRRVGKHSDYYRCGLQFLG-CS 189
Query: 190 VEXXXXXXXXXXXXXXXXXXXXGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGD 249
++ GD +YN GELLAHPI+ SL GT+ EWL +L+AFN+GD
Sbjct: 190 MDEYPRDQWAQQAFFLGLAALLGDGVYNIGELLAHPILESLKGTENEWLMELLKAFNTGD 249
Query: 250 LVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERT 309
+ ++ ++ ++ + P L E KL +KI++LCLME+ F R + +R I + IA+ T
Sbjct: 250 INKFNDMKKIWSKI----PDLAAQEVKLRQKISLLCLMEMTFKRSAIERAISFTDIAQET 305
Query: 310 KLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSWLGKV 369
KL ++VE L+MK+L++ L+ G IDQV G V++SWVQPRVL QI + LD+W+G +
Sbjct: 306 KLPAKEVELLIMKALALDLVRGEIDQVAGVVNMSWVQPRVLNRSQIVGMASTLDTWMGAI 365
>UNIPROTKB|G4N7S1 [details] [associations]
symbol:MGG_03524 "26S proteasome regulatory subunit RPN9"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 GO:GO:0000502
GO:GO:0043581 EMBL:CM001234 KO:K03039 RefSeq:XP_003716395.1
EnsemblFungi:MGG_03524T0 GeneID:2676989 KEGG:mgr:MGG_03524
Uniprot:G4N7S1
Length = 382
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 122/367 (33%), Positives = 194/367 (52%)
Query: 6 YLESLRNDHPE-LGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFIT 64
+L R+D PE L D +++KLWHQLT +F H + + A + Y F+
Sbjct: 9 FLADQRDDAPEELQPLILKFEDYWERKLWHQLTEASLEFFDHPISRP--ARLHFYKVFVA 66
Query: 65 DFETKINLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIAM 124
F KIN LKL A+ + + + + +LE V +K+ +++ ++ ++ + +A
Sbjct: 67 KFADKINQLKLVDIALKAATAAKDPKERLQFLETVAKKV---DDEDSQDAYVFALIAVAR 123
Query: 125 FKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLY 184
KL+ D + +K L+ + LDS ++ V A +Y + Y++ +FA +Y+ ALLY
Sbjct: 124 VKLDLKDPEGTRKDLDKAERILDSFDSVETVVSAAFYSAQADYYQAQADFASYYRNALLY 183
Query: 185 LAYTSVEXXXXXXXXXXXXXXXXXXXXGDNIYNFGELLAHPIINSLT-GTKVEWLYYILQ 243
LA V +IYNFGELL HPI+++LT K WL +L
Sbjct: 184 LACIDVSALTPEERRSRAYDLAIAALASTSIYNFGELLLHPILDALTLSDKDSWLRELLF 243
Query: 244 AFNSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLS 303
AFN GDL Y L + + + P L ++ +L +KI + L E +F RP DR +
Sbjct: 244 AFNRGDLAAYDVL----SGHIGSNPLLAKHRGQLRQKIYLAALTEAVFRRPPHDRAMTFQ 299
Query: 304 IIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLD 363
IA TK+ +++EHL+MK+LS+ L+ G IDQV+ H++WVQP+VL + QI ++R RL
Sbjct: 300 TIARETKVQPDEIEHLVMKALSLGLLRGNIDQVDEVAHINWVQPKVLDMKQIDNMRLRLK 359
Query: 364 SWLGKVH 370
W V+
Sbjct: 360 DWDSSVN 366
>ASPGD|ASPL0000013342 [details] [associations]
symbol:AN3716 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
EMBL:BN001302 EMBL:AACD01000061 eggNOG:NOG272621
HOGENOM:HOG000216633 KO:K03039 OrthoDB:EOG4XSPZG RefSeq:XP_661320.1
STRING:Q5B6W4 EnsemblFungi:CADANIAT00005009 GeneID:2873142
KEGG:ani:AN3716.2 OMA:ASTECAD Uniprot:Q5B6W4
Length = 381
Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 117/340 (34%), Positives = 183/340 (53%)
Query: 26 DLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITDFETKINLLKLAHFAVIVSRQ 85
+ +++KLWHQLT L F + ++ + L+ F+ F KIN L ++ S +
Sbjct: 30 EYWERKLWHQLTNALIDFFR--LPESAPQRLPLFKTFVLSFADKINQLNFVSLGLMASTE 87
Query: 86 YPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIAMFKLEQGDRKECKKLLEDGKST 145
+ Q +S+L + +K+ N+ ++ +Y ++A K + +K LE +
Sbjct: 88 CADDQERLSFLTSLADKV---NKPDSQDAYIYALAEVANVKQRLHNLDGAQKDLETCQKV 144
Query: 146 LDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLYLAYTSVEXXXXXXXXXXXXXX 205
LDS ++ V+A++Y V++ Y+ QEFA FYK ALLYLA +E
Sbjct: 145 LDSFDAVENVVHASFYKVNADYYHAKQEFASFYKNALLYLACIDLEDLSESERVSRAYNL 204
Query: 206 XXXXXXGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRYQELCRVHNAALR 265
D+IYNFGELL HPI++SLT T WL +L AFN GDL Y L +
Sbjct: 205 SVAALVSDSIYNFGELLLHPILDSLTETPHSWLRDLLFAFNRGDLTAYDVLA----GNIS 260
Query: 266 AQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLSIEDVEHLLMKSLS 325
L + L +KI++ L E++F RP DR + + I+ TK+ E++EHL+MK+LS
Sbjct: 261 KNQLLQAHRFFLYQKISLSALTEMVFRRPPHDRNLTFASISAETKVKPEEIEHLVMKALS 320
Query: 326 VHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSW 365
+ L++G IDQV ++WVQP+VL + QI+ +R+RL W
Sbjct: 321 LGLLKGAIDQVGQIAQINWVQPKVLDMKQIEGMRNRLKDW 360
>WB|WBGene00004465 [details] [associations]
symbol:rpn-9 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0008340 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0010171 GO:GO:0040011
GO:GO:0000003 EMBL:Z49130 GO:GO:0005838 eggNOG:NOG272621
HOGENOM:HOG000216633 KO:K03039 OMA:INQVEQV
GeneTree:ENSGT00390000001802 PIR:T24581 RefSeq:NP_496405.1
ProteinModelPortal:Q22253 IntAct:Q22253 MINT:MINT-210985
STRING:Q22253 PaxDb:Q22253 EnsemblMetazoa:T06D8.8.1
EnsemblMetazoa:T06D8.8.2 GeneID:174715 KEGG:cel:CELE_T06D8.8
UCSC:T06D8.8.1 CTD:174715 WormBase:T06D8.8 InParanoid:Q22253
NextBio:885188 Uniprot:Q22253
Length = 387
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 122/387 (31%), Positives = 198/387 (51%)
Query: 1 MAALQYLES--LRNDHPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQL 58
M A YL + P +W N L +L++KKLWHQLT+ V F A + +
Sbjct: 1 MTAQDYLNGKLAAANGPLADDWKN-LKELWEKKLWHQLTVLTRSLVKKPQFVASTDMHEF 59
Query: 59 YHNFITDFETKINLLKLAHFAVIVSRQYP--EKQAAISYLE---GVIEKLRATNEQRKEE 113
Y F+ ++E ++N L+L + +++ +KQ ++ +L VI K + R
Sbjct: 60 YRLFVAEWELRVNPLQLVEICISIAQNIATKDKQKSMEFLSKIGNVINKDKIA-VARLHT 118
Query: 114 PILYIKMQIAMFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQE 173
+ +++ + D K + ++ + +DS+ + V+A +Y VSS Y + +
Sbjct: 119 GEIEARLENKDKNGQIIDLKSIRTQIDSTQHEVDSLVGVT-EVHAPFYRVSSLYLREVGD 177
Query: 174 FAEFYKCALLYLAYTSVEXXXXXXXXXXXXXXXXXXXXGDNIYNFGELLAHPIINSLTGT 233
FA +Y+ AL YL G+N++NFGELLAHPI+ SL GT
Sbjct: 178 FAGYYREALRYLGVEDANNLTTEQKQVHAVLLGFAALLGENVHNFGELLAHPILKSLEGT 237
Query: 234 KVEWLYYILQAFNSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSR 293
+ W+ +L AFNSGDL R+ L L + + L KI ++ +ME+ SR
Sbjct: 238 RERWIVDVLLAFNSGDLTRFFSL----EGDWGGWDDLKKQKDFLTAKIRLMAVMELAVSR 293
Query: 294 PSEDRTIPLSIIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIP 353
P++ R++ IA + ++ ++VE L+MK+LS LI G I+QVE V+V+WVQPRVL P
Sbjct: 294 PTKARSVSFKEIATKCQIPFDEVEFLVMKALSKDLIRGDINQVEQVVYVTWVQPRVLDNP 353
Query: 354 QIKSLRDRLDSWLGKVHT--ALLSIEA 378
QI + R+ +W V++ ++S EA
Sbjct: 354 QIMQMATRISAWRNDVNSMEGIVSKEA 380
>UNIPROTKB|Q22253 [details] [associations]
symbol:rpn-9 "Protein RPN-9" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 GO:GO:0008340
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 EMBL:Z49130 GO:GO:0005838
eggNOG:NOG272621 HOGENOM:HOG000216633 KO:K03039 OMA:INQVEQV
GeneTree:ENSGT00390000001802 PIR:T24581 RefSeq:NP_496405.1
ProteinModelPortal:Q22253 IntAct:Q22253 MINT:MINT-210985
STRING:Q22253 PaxDb:Q22253 EnsemblMetazoa:T06D8.8.1
EnsemblMetazoa:T06D8.8.2 GeneID:174715 KEGG:cel:CELE_T06D8.8
UCSC:T06D8.8.1 CTD:174715 WormBase:T06D8.8 InParanoid:Q22253
NextBio:885188 Uniprot:Q22253
Length = 387
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 122/387 (31%), Positives = 198/387 (51%)
Query: 1 MAALQYLES--LRNDHPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQL 58
M A YL + P +W N L +L++KKLWHQLT+ V F A + +
Sbjct: 1 MTAQDYLNGKLAAANGPLADDWKN-LKELWEKKLWHQLTVLTRSLVKKPQFVASTDMHEF 59
Query: 59 YHNFITDFETKINLLKLAHFAVIVSRQYP--EKQAAISYLE---GVIEKLRATNEQRKEE 113
Y F+ ++E ++N L+L + +++ +KQ ++ +L VI K + R
Sbjct: 60 YRLFVAEWELRVNPLQLVEICISIAQNIATKDKQKSMEFLSKIGNVINKDKIA-VARLHT 118
Query: 114 PILYIKMQIAMFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQE 173
+ +++ + D K + ++ + +DS+ + V+A +Y VSS Y + +
Sbjct: 119 GEIEARLENKDKNGQIIDLKSIRTQIDSTQHEVDSLVGVT-EVHAPFYRVSSLYLREVGD 177
Query: 174 FAEFYKCALLYLAYTSVEXXXXXXXXXXXXXXXXXXXXGDNIYNFGELLAHPIINSLTGT 233
FA +Y+ AL YL G+N++NFGELLAHPI+ SL GT
Sbjct: 178 FAGYYREALRYLGVEDANNLTTEQKQVHAVLLGFAALLGENVHNFGELLAHPILKSLEGT 237
Query: 234 KVEWLYYILQAFNSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSR 293
+ W+ +L AFNSGDL R+ L L + + L KI ++ +ME+ SR
Sbjct: 238 RERWIVDVLLAFNSGDLTRFFSL----EGDWGGWDDLKKQKDFLTAKIRLMAVMELAVSR 293
Query: 294 PSEDRTIPLSIIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIP 353
P++ R++ IA + ++ ++VE L+MK+LS LI G I+QVE V+V+WVQPRVL P
Sbjct: 294 PTKARSVSFKEIATKCQIPFDEVEFLVMKALSKDLIRGDINQVEQVVYVTWVQPRVLDNP 353
Query: 354 QIKSLRDRLDSWLGKVHT--ALLSIEA 378
QI + R+ +W V++ ++S EA
Sbjct: 354 QIMQMATRISAWRNDVNSMEGIVSKEA 380
>UNIPROTKB|E1C2R6 [details] [associations]
symbol:E1C2R6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005838 "proteasome regulatory particle"
evidence=IEA] [GO:0007127 "meiosis I" evidence=IEA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 GO:GO:0007127
GO:GO:0005838 GeneTree:ENSGT00390000001802 EMBL:AADN02040062
EMBL:AADN02040063 EMBL:AADN02040064 IPI:IPI00821969
Ensembl:ENSGALT00000040352 OMA:RGTPPCP ArrayExpress:E1C2R6
Uniprot:E1C2R6
Length = 381
Score = 280 (103.6 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 54/121 (44%), Positives = 83/121 (68%)
Query: 264 LRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLSIEDVEHLLMKS 323
L QP L NE LL+KI +LCLME+ F+RP+ R + IA+ K+++ +VE L+MK+
Sbjct: 260 LPQQPDLAANEALLLQKIQLLCLMEMTFTRPANHRQLTFEEIAKSAKVTVNEVELLVMKA 319
Query: 324 LSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSWLGKVHTALLSIEAETPDL 383
LSV L++G ID+V+ VH++WVQPRVL + QIK ++DRL+ W V + + +E + D+
Sbjct: 320 LSVGLVKGSIDEVDKRVHMTWVQPRVLDLQQIKGMKDRLEFWCTDVRSMEMLVEHQAHDI 379
Query: 384 V 384
+
Sbjct: 380 L 380
Score = 213 (80.0 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 52/174 (29%), Positives = 93/174 (53%)
Query: 6 YLESLRNDHPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITD 65
+L+ ++ P ++ L +LY KKLWHQLTL++ FV F GD LI+LY NFI++
Sbjct: 7 FLQQSQSAGPGQAAVWHRLEELYNKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISE 66
Query: 66 FETKINLLKLAHFAVIVSRQYP-EKQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIAM 124
FE ++N L L + V RQ + A+++LE EK++++ +E ++ K I
Sbjct: 67 FEHRVNPLSLVEIILHVVRQMTADPTVALTFLEKTREKVKSS-----DEAVILCKTAIGA 121
Query: 125 FKLEQGDRKECK--KLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAE 176
KL GD + K + L++ + L+++ + ++ A +S + ++ E
Sbjct: 122 LKLNIGDLQVTKVRRPLKEVEEMLNNLPGVTSTLIARLLMISPSQVTYQEQMWE 175
>POMBASE|SPAC607.05 [details] [associations]
symbol:rpn9 "19S proteasome regulatory subunit Rpn9"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=TAS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008541 "proteasome regulatory particle, lid
subcomplex" evidence=ISO] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 PomBase:SPAC607.05
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GO:GO:0043161
GenomeReviews:CU329670_GR GO:GO:0008541 eggNOG:NOG272621
HOGENOM:HOG000216633 KO:K03039 OMA:INQVEQV PIR:T50225
RefSeq:NP_593594.1 ProteinModelPortal:Q9US13 STRING:Q9US13
EnsemblFungi:SPAC607.05.1 GeneID:2543114 KEGG:spo:SPAC607.05
OrthoDB:EOG4XSPZG NextBio:20804141 Uniprot:Q9US13
Length = 381
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 113/352 (32%), Positives = 181/352 (51%)
Query: 15 PE-LGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITDFETKINLL 73
PE L + Y + DLY++KLW QLT L F + + LY NF+ F IN L
Sbjct: 21 PESLQQSYILMEDLYERKLWKQLTDALIVFFDTP--ETVPLRLPLYTNFVNSFRPNINQL 78
Query: 74 KLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIAMFKLEQGDRK 133
K + + +A + L ++ +L +E++ ++ +Y + IA KL G
Sbjct: 79 KAVYMGLKAFESCSNDEA-LRNLNQIVNEL---DEEKYKDAYVYSIVAIARIKLISGKLD 134
Query: 134 ECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLYLAYTSVEXX 193
E ++LL +D + ++ ++++YY VS+ Y+K ++A++Y+ LLYL+ ++
Sbjct: 135 EARELLVKASKIIDHIDYVESLIHSSYYSVSADYYKAKADYAQYYRHCLLYLSCIDLDKC 194
Query: 194 XXXXXXXXXXXXXXXXXXGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRY 253
GD IYNFGELL HP+ L GT+ EWL+ ++ A N GDL +
Sbjct: 195 SHTELVERAVDLSVAAILGD-IYNFGELLLHPVFELLVGTQHEWLHDLVIAMNVGDLPLF 253
Query: 254 QELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLSI 313
+ L + P L + L +KI ++ L+E++F P RT+ IA T++
Sbjct: 254 ERLM----GQINKMPLLQSSVALLGQKIRLMALIELVFQLPPNQRTLTFDTIARATRIPS 309
Query: 314 EDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSW 365
+VE L+M++LSV LI G+ID+V V +S VQ R+L QI S+ RL W
Sbjct: 310 NEVELLIMRALSVGLITGVIDEVTQIVTISSVQSRILNHSQIASMESRLREW 361
>SGD|S000002835 [details] [associations]
symbol:RPN9 "Non-ATPase regulatory subunit of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=IDA]
[GO:0005198 "structural molecule activity" evidence=IMP]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0034515 "proteasome storage granule"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0043248 "proteasome assembly" evidence=IMP] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 SGD:S000002835 EMBL:U33007 GO:GO:0005198
EMBL:BK006938 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0043248
GO:GO:0008541 GO:GO:0006511 RefSeq:NP_010720.3 GeneID:852042
KEGG:sce:YDR432W GO:GO:0034515 PDB:4B4T PDBsum:4B4T
eggNOG:NOG272621 HOGENOM:HOG000216633 KO:K03039 OMA:LAHPILE
GeneTree:ENSGT00390000001802 OrthoDB:EOG4XSPZG PIR:S69708
RefSeq:NP_010715.3 ProteinModelPortal:Q04062 DIP:DIP-5261N
IntAct:Q04062 MINT:MINT-529103 STRING:Q04062 PaxDb:Q04062
PeptideAtlas:Q04062 EnsemblFungi:YDR427W GeneID:852037
KEGG:sce:YDR427W CYGD:YDR427w NextBio:970278 Genevestigator:Q04062
GermOnline:YDR427W Uniprot:Q04062
Length = 393
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 116/383 (30%), Positives = 195/383 (50%)
Query: 7 LESLRND-HPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITD 65
L +LR + P L + Y++KLW QL+ L +F A ++ ++LY NF++
Sbjct: 11 LSTLRMEADPSLHPLFEQFEKFYEEKLWFQLSESLTKFFDDA--KSTPLRLRLYDNFVSK 68
Query: 66 FETKINLLKLAHFAVIVSRQYPEKQAAISYLEGV------IEKLRATNEQRKE--EPILY 117
F KIN L + + + + + ++ YL+ + ++ + N K+ + IL
Sbjct: 69 FYDKINQLSVVKYLLASLKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILL 128
Query: 118 IKMQIAMFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEF 177
I +IA L + D + + LL+D + TLD I + ++Y +SQY KF +F F
Sbjct: 129 IDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSIPLRITNSFYSTNSQYFKFKNDFNSF 188
Query: 178 YKCALLYLAYTSVEXXXXXXXXXXXXXXXXXXXX-GDNIYNFGELLAHPIINSLTG-TKV 235
Y +LLYL+ GD IYNFGELL HPI+ ++ +
Sbjct: 189 YYTSLLYLSTLEPSTSITLAERQQLAYDLSISALLGDKIYNFGELLHHPIMETIVNDSNY 248
Query: 236 EWLYYILQAFNSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPS 295
+WL+ +L A GD ++ L +V + + P L ++E L +KI ++ L+E +F +
Sbjct: 249 DWLFQLLNALTVGDFDKFDSLIKVQISKI---PILAQHESFLRQKICLMTLIETVFVK-- 303
Query: 296 EDRTIPLSIIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQI 355
R + I++ T L ++VEHL+M+++S+ L++G IDQV V +SWVQPR++ QI
Sbjct: 304 NIRMLSFEDISKATHLPKDNVEHLVMRAISLGLLKGSIDQVNELVTISWVQPRIISGDQI 363
Query: 356 KSLRDRLDSWLGKVHTALLSIEA 378
++DRL W +V +EA
Sbjct: 364 TKMKDRLVEWNDQVEKLGKKMEA 386
>GENEDB_PFALCIPARUM|PF10_0298 [details] [associations]
symbol:PF10_0298 "26S proteasome subunit,
putative" species:5833 "Plasmodium falciparum" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 GO:GO:0004175
GO:GO:0000502 GO:GO:0006511 EMBL:AE014185 KO:K03039 OMA:INQVEQV
RefSeq:XP_001347582.1 ProteinModelPortal:Q8IJA0 PRIDE:Q8IJA0
EnsemblProtists:PF10_0298:mRNA GeneID:810455 KEGG:pfa:PF10_0298
EuPathDB:PlasmoDB:PF3D7_1030500 HOGENOM:HOG000284566
ProtClustDB:CLSZ2434533 Uniprot:Q8IJA0
Length = 393
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 93/362 (25%), Positives = 184/362 (50%)
Query: 29 QKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITDFETKINLLKLAHFAVIVSRQYPE 88
+KKL H+LTL++++FV + + D +L++ +++ TK+ A IV+ + +
Sbjct: 42 EKKLHHELTLEVQKFVNNKDVELIDKF-RLFYTYLSPLITKLKKTIYAELLYIVTVDF-D 99
Query: 89 KQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIAMF-KLEQGDRKECKKLLEDGKSTLD 147
I Y++ + L E K+ I+Y + I + KLE D K C+ +E+ K+ L
Sbjct: 100 TNWTIEYVKESEKNL----ENDKDAIIIYRCILILKYIKLE--DYKNCEAEIENAKNMLQ 153
Query: 148 SMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLYLAYTSVEXXXXXXXXXXXXXXXX 207
+ ++ + Y + Y+K ++ + K ALLYLAYT +
Sbjct: 154 GVIGLNVVAHKFYNYALMCYYKALKKSDLYVKYALLYLAYTPLNDLNDYDRIDIGTYICI 213
Query: 208 XXXXGDNIYNFGELLAHPIINSLTGTKVE--WLYYILQAFNSGDLVRYQELCRVHNAALR 265
+N+YN GE++ P+IN E WLY ++ +N G++ + E + + +
Sbjct: 214 HSIISENVYNIGEIIQLPLINVCIKNNEETNWLYELIYIYNEGNIDSFNETIGKYQSNI- 272
Query: 266 AQPALVEN-EKKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLSIEDVEHLLMKSL 324
+ +++N + +L+K+ +L LM++ F + + I IA+ K+ I +VE +L+ +
Sbjct: 273 -ENCILKNYQHNMLKKMTLLALMDLAFKKKKQREDISFHEIAQHCKIDINEVEKMLITAK 331
Query: 325 SVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSWLGKVHTALLSIEAETPDLV 384
S ++I ID+++ TV ++WV+PRVL +I +++ +D W+ + +E + +L+
Sbjct: 332 SKNIITCKIDEIQKTVKITWVKPRVLNNEKIYFMKESIDKWINNSKNLITYMEDLSVELL 391
Query: 385 AS 386
S
Sbjct: 392 IS 393
>UNIPROTKB|Q8IJA0 [details] [associations]
symbol:PF10_0298 "26S proteasome subunit, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 GO:GO:0004175
GO:GO:0000502 GO:GO:0006511 EMBL:AE014185 KO:K03039 OMA:INQVEQV
RefSeq:XP_001347582.1 ProteinModelPortal:Q8IJA0 PRIDE:Q8IJA0
EnsemblProtists:PF10_0298:mRNA GeneID:810455 KEGG:pfa:PF10_0298
EuPathDB:PlasmoDB:PF3D7_1030500 HOGENOM:HOG000284566
ProtClustDB:CLSZ2434533 Uniprot:Q8IJA0
Length = 393
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 93/362 (25%), Positives = 184/362 (50%)
Query: 29 QKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITDFETKINLLKLAHFAVIVSRQYPE 88
+KKL H+LTL++++FV + + D +L++ +++ TK+ A IV+ + +
Sbjct: 42 EKKLHHELTLEVQKFVNNKDVELIDKF-RLFYTYLSPLITKLKKTIYAELLYIVTVDF-D 99
Query: 89 KQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIAMF-KLEQGDRKECKKLLEDGKSTLD 147
I Y++ + L E K+ I+Y + I + KLE D K C+ +E+ K+ L
Sbjct: 100 TNWTIEYVKESEKNL----ENDKDAIIIYRCILILKYIKLE--DYKNCEAEIENAKNMLQ 153
Query: 148 SMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLYLAYTSVEXXXXXXXXXXXXXXXX 207
+ ++ + Y + Y+K ++ + K ALLYLAYT +
Sbjct: 154 GVIGLNVVAHKFYNYALMCYYKALKKSDLYVKYALLYLAYTPLNDLNDYDRIDIGTYICI 213
Query: 208 XXXXGDNIYNFGELLAHPIINSLTGTKVE--WLYYILQAFNSGDLVRYQELCRVHNAALR 265
+N+YN GE++ P+IN E WLY ++ +N G++ + E + + +
Sbjct: 214 HSIISENVYNIGEIIQLPLINVCIKNNEETNWLYELIYIYNEGNIDSFNETIGKYQSNI- 272
Query: 266 AQPALVEN-EKKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLSIEDVEHLLMKSL 324
+ +++N + +L+K+ +L LM++ F + + I IA+ K+ I +VE +L+ +
Sbjct: 273 -ENCILKNYQHNMLKKMTLLALMDLAFKKKKQREDISFHEIAQHCKIDINEVEKMLITAK 331
Query: 325 SVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSWLGKVHTALLSIEAETPDLV 384
S ++I ID+++ TV ++WV+PRVL +I +++ +D W+ + +E + +L+
Sbjct: 332 SKNIITCKIDEIQKTVKITWVKPRVLNNEKIYFMKESIDKWINNSKNLITYMEDLSVELL 391
Query: 385 AS 386
S
Sbjct: 392 IS 393
>CGD|CAL0002740 [details] [associations]
symbol:orf19.1993 species:5476 "Candida albicans" [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=IEA]
[GO:0034515 "proteasome storage granule" evidence=IEA] [GO:0043248
"proteasome assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 CGD:CAL0002740
EMBL:AACQ01000031 EMBL:AACQ01000030 eggNOG:NOG272621 KO:K03039
RefSeq:XP_719443.1 RefSeq:XP_719572.1 STRING:Q5AD74 GeneID:3638686
GeneID:3638846 KEGG:cal:CaO19.1993 KEGG:cal:CaO19.9545
Uniprot:Q5AD74
Length = 416
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 76/255 (29%), Positives = 139/255 (54%)
Query: 112 EEPILYIKMQIAMFKLEQGDRKECKKLLEDGKSTLDSMTD-IDPSVYANYYWVSSQYHKF 170
+E ++Y+K+QIA + L+ + + +L D +S+ + ++ + + YY +++ K
Sbjct: 153 DEAVIYVKLQIARYYLKLHQLNKAEDILIDVAPKFESLNNNLNSKINSAYYLEKTEHAKI 212
Query: 171 HQEFAEFYKCALLYLAYTSVEXXXXXXXXXXXXXXXXXXXXGDNIYNFGELLAHPII--- 227
+ ++Y LLYL+ SV GD IYNFGEL+ H I
Sbjct: 213 LNNYNDYYSNGLLYLS--SVTNLTDEEKNKLRYELCIAALLGDKIYNFGELILHDIFQEI 270
Query: 228 ----NSLTGTKVEWLYYILQAFNSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINI 283
+S T ++ WLY ++ N+G++ + + A++ P L +++ L EK+ I
Sbjct: 271 SQPSSSTTSSQYNWLYQLIINLNAGNVDNFNHWLSI---AIKKAPILEQHQIFLKEKLTI 327
Query: 284 LCLMEIIFSRPSEDRTIPLSIIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVS 343
+ L+E++ S D+ + II+E+T I+ VE +++K++S+HLIEG I+Q + V VS
Sbjct: 328 MALLELV----SADKKLSFDIISEKTNTPIDQVELIIIKTMSLHLIEGYINQDQQYVVVS 383
Query: 344 WVQPRVLGIPQIKSL 358
W+QPR+L + Q+K+L
Sbjct: 384 WIQPRILNLDQVKNL 398
Score = 115 (45.5 bits), Expect = 0.00079, P = 0.00079
Identities = 38/163 (23%), Positives = 76/163 (46%)
Query: 11 RNDHPELGEWYNALADLYQKKLWHQLTLKLEQ--FVAHAVFQAGDALIQLYHNFITDFET 68
++D+ EL L D Y++KLWHQLT L+Q + + + +LY+ FI F+
Sbjct: 20 KSDNSELNNIIYQLEDFYERKLWHQLTQVLDQIYYTLDSTIITSNLKNRLYNLFIKQFQL 79
Query: 69 KINLLKLAHFAVIVSRQYPEKQAA--ISYLEGVIEKLRATNEQRKEEPILYIKMQIAMFK 126
K+N +K+ + + P++ + ++ + I L+ ++ R + + +
Sbjct: 80 KLNPIKVVDYLLESFENDPKETLSTLLTLKKDFINDLKRSHNYRVTDDV--DDNDDNEEE 137
Query: 127 LEQGDRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHK 169
E+ +E K+L++D ++ + I A YY Q +K
Sbjct: 138 EEENQDEELKQLIQDDEAVIYVKLQI-----ARYYLKLHQLNK 175
>FB|FBgn0033902 [details] [associations]
symbol:Tango7 "Transport and Golgi organization 7"
species:7227 "Drosophila melanogaster" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0007030 "Golgi organization" evidence=IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0048812 "neuron projection morphogenesis"
evidence=IMP] InterPro:IPR000717 InterPro:IPR003607 Pfam:PF01399
SMART:SM00088 SMART:SM00471 EMBL:AE013599 GO:GO:0005829
GO:GO:0005794 GO:GO:0005875 GO:GO:0003824 GO:GO:0009306
GO:GO:0003743 GO:GO:0007030 eggNOG:NOG253821 KO:K15030
HAMAP:MF_03012 GeneTree:ENSGT00390000004456 OMA:PNTFLLD
EMBL:AY118924 RefSeq:NP_610932.1 UniGene:Dm.3068
ProteinModelPortal:Q7JVI3 SMR:Q7JVI3 IntAct:Q7JVI3 STRING:Q7JVI3
PaxDb:Q7JVI3 PRIDE:Q7JVI3 EnsemblMetazoa:FBtr0087579 GeneID:36565
KEGG:dme:Dmel_CG8309 CTD:36565 FlyBase:FBgn0033902
InParanoid:Q7JVI3 OrthoDB:EOG4TTF0C PhylomeDB:Q7JVI3
GenomeRNAi:36565 NextBio:799232 Bgee:Q7JVI3 Uniprot:Q7JVI3
Length = 387
Score = 136 (52.9 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 43/176 (24%), Positives = 79/176 (44%)
Query: 214 NIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRYQELCRVHNAALRAQPALVEN 273
N + LL+ + L G + ++ +L F S L Y + H + +Q N
Sbjct: 217 NTFLLDPLLSLKPVRFLEG---DLIHDLLSIFVSEKLPAYVQFYEDHREFVNSQGL---N 270
Query: 274 EKKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLSIEDVEHLLMKSLSVHLIEGII 333
++ ++K+ +L M++ S P + + + +++ ++VE +++ L L+ +
Sbjct: 271 HEQNMKKMRLLTFMQLAESSPE----MTFETLTKELQINEDEVEPFVIEVLKTKLVRARL 326
Query: 334 DQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSW---LGKVHTALLSIEAETPDLVAS 386
DQ VH+S R G PQ + LRD L +W L V L S+ + DL S
Sbjct: 327 DQANQKVHISSTMHRTFGAPQWEQLRDLLQAWKENLSTVREGLTSVSSAQLDLARS 382
>UNIPROTKB|Q292F0 [details] [associations]
symbol:Tango7 "Eukaryotic translation initiation factor 3
subunit M" species:46245 "Drosophila pseudoobscura pseudoobscura"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005794 "Golgi
apparatus" evidence=ISS] [GO:0009306 "protein secretion"
evidence=ISS] InterPro:IPR000717 InterPro:IPR003607 Pfam:PF01399
SMART:SM00088 SMART:SM00471 GO:GO:0005794 GO:GO:0003824
GO:GO:0009306 GO:GO:0003743 EMBL:CM000071 GenomeReviews:CM000071_GR
eggNOG:NOG253821 KO:K15030 HAMAP:MF_03012 OMA:PNTFLLD
OrthoDB:EOG4TTF0C RefSeq:XP_001360337.1 GeneID:4803654
KEGG:dpo:Dpse_GA20974 FlyBase:FBgn0080963 InParanoid:Q292F0
Uniprot:Q292F0
Length = 387
Score = 132 (51.5 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 41/173 (23%), Positives = 78/173 (45%)
Query: 214 NIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRYQELCRVHNAALRAQPALVEN 273
N + LLA + L G + ++ +L F S L Y + H + +Q N
Sbjct: 217 NTFLLDPLLALKPVRFLEG---DLIHDLLSIFVSDKLPSYVQFYEDHKEFVNSQGL---N 270
Query: 274 EKKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLSIEDVEHLLMKSLSVHLIEGII 333
++ ++K+ +L M++ S P + + + +++ ++VE +++ L L+ +
Sbjct: 271 HEQNMKKMRLLTFMQLAESNPE----MTFDTLTKELQITEDEVEPFVIQVLKTKLVRARL 326
Query: 334 DQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSW---LGKVHTALLSIEAETPDL 383
DQ VH+S R G PQ + LRD L +W L V L ++ + +L
Sbjct: 327 DQANRKVHISSTMHRTFGAPQWEQLRDLLQAWKENLSSVRDGLTNVSSAQLEL 379
>TAIR|locus:2076517 [details] [associations]
symbol:AT3G02200 "AT3G02200" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0000502 UniGene:At.41171 eggNOG:NOG253821 KO:K15030
OMA:IQANKVT EMBL:AY062722 EMBL:AY093343 IPI:IPI00518990
RefSeq:NP_186869.2 UniGene:At.21256 UniGene:At.67677
UniGene:At.73005 ProteinModelPortal:Q8W4A0 STRING:Q8W4A0
PaxDb:Q8W4A0 PRIDE:Q8W4A0 DNASU:821267 EnsemblPlants:AT3G02200.2
GeneID:821267 KEGG:ath:AT3G02200 TAIR:At3g02200
HOGENOM:HOG000005880 InParanoid:Q8W4A0 PhylomeDB:Q8W4A0
ProtClustDB:CLSN2687479 Genevestigator:Q8W4A0 Uniprot:Q8W4A0
Length = 417
Score = 127 (49.8 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 42/160 (26%), Positives = 81/160 (50%)
Query: 220 ELLAHPIINSLT-GTKVEWLYYILQAFNSGDLVRYQELCRVHNAALRAQPALVENEKKLL 278
+LL P + L K +Y +L+ F + L Y E ++ L++ + NE +
Sbjct: 240 DLLDLPAVAQLEKDAKYAPVYQLLKIFLTQRLNAYTEFQNANSGFLQSYG--LSNED-CV 296
Query: 279 EKINILCLMEIIFSRPSEDRTIPLSIIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEG 338
K+ +L L+++ E IP + I + +++ +DVE ++K+++ LIE +DQ+
Sbjct: 297 TKMRLLSLVDLA---SDESGKIPYTSIKDTLQVNEQDVELWIVKAITAKLIECKMDQMNQ 353
Query: 339 TVHVSWVQPRVLGIPQIKSLRDRLDSWLGKVHTALLSIEA 378
+ VS R G Q +SLR +L +W + + + +IE+
Sbjct: 354 VLIVSRSSEREFGTKQWQSLRTKLATWKDNISSIITTIES 393
>UNIPROTKB|F1NGK0 [details] [associations]
symbol:COPS7A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008180
"signalosome" evidence=IEA] [GO:0010388 "cullin deneddylation"
evidence=IEA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005737 GO:GO:0008180 GO:GO:0010388 OMA:HNVRQLE
GeneTree:ENSGT00390000013069 EMBL:AADN02061125 IPI:IPI00598529
Ensembl:ENSGALT00000023360 Uniprot:F1NGK0
Length = 275
Score = 119 (46.9 bits), Expect = 0.00013, P = 0.00013
Identities = 39/166 (23%), Positives = 75/166 (45%)
Query: 215 IYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRYQELCRVHNAALRAQPALVENE 274
IY FGELL P + L ++ ++++L F G Y L N P L E +
Sbjct: 40 IYVFGELLDMPAVRELADSEFSPVFHLLTIFACGTYADY--LAEAANL-----PPLTEAQ 92
Query: 275 KKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKL-SIEDVEHLLMKSLSVHLIEGII 333
K L ++++ L I + IP S++ E+ +L ++ +E L+++++ ++ G +
Sbjct: 93 KNKLRHLSVVTLAAKI-------KCIPYSVLLEQLQLKNVRQLEDLVIEAVYADVLRGSL 145
Query: 334 DQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSWLGKVHTALLSIEAE 379
DQ + V + R + ++ ++ L W L IE +
Sbjct: 146 DQRNQRLEVDYSIGRDIRREELSTITRTLQEWCQGCEVVLSGIEEQ 191
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.397 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 386 366 0.00084 117 3 11 22 0.37 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 27
No. of states in DFA: 613 (65 KB)
Total size of DFA: 252 KB (2135 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.44u 0.14s 30.58t Elapsed: 00:00:01
Total cpu time: 30.44u 0.15s 30.59t Elapsed: 00:00:01
Start: Fri May 10 17:47:43 2013 End: Fri May 10 17:47:44 2013