BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043780
(386 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54NQ0|PSD13_DICDI 26S proteasome non-ATPase regulatory subunit 13 OS=Dictyostelium
discoideum GN=psmD13 PE=2 SV=1
Length = 385
Score = 285 bits (729), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 151/385 (39%), Positives = 236/385 (61%), Gaps = 9/385 (2%)
Query: 4 LQYLESLRNDHPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFI 63
L+YLE L+ P+L + N + D Y+ KLWHQLT ++E + L Y NFI
Sbjct: 7 LEYLEHLKKIVPDLSDQINNIKDTYENKLWHQLTKQIEMIIISPQLLEKKELFNFYTNFI 66
Query: 64 TDFETKINLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIA 123
DFE K+ L L + V+RQ+ ++ ++E + +K++ + K IL + IA
Sbjct: 67 RDFENKLRPLSLVEICIAVARQFDTDESR-KFIETISQKVK----KDKSAYILTLSY-IA 120
Query: 124 MFKLEQG---DRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKC 180
L G ++CKK LE K L +T +D VY+++Y VS+ YH + +EFYK
Sbjct: 121 NMNLRSGVAEQLQDCKKTLELAKEELQGVTGLDTIVYSSFYRVSTDYHMAKSQASEFYKN 180
Query: 181 ALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIINSLTGTKVEWLYY 240
AL+YL+Y +E++S + LA++L ++AL+G+N+Y FG+L+A+PI+ +L G++ WL
Sbjct: 181 ALMYLSYCKLETISQEEQASLAYNLCIAALVGENVYGFGDLIANPILKALEGSQHNWLIA 240
Query: 241 ILQAFNSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTI 300
L+AFN GD+ +++ L H + Q A+ N +KL +KI+IL L+E+ F PS+ R+I
Sbjct: 241 FLKAFNIGDIQQFEGLMSQHRDIISTQTAITNNMQKLRQKISILSLLELAFRTPSDKRSI 300
Query: 301 PLSIIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRD 360
S IA+ TKL + ++EHLLMKSLS++LI+G IDQ +H++WV PR+L + QI S+ +
Sbjct: 301 SFSKIAQATKLPLGEIEHLLMKSLSLNLIKGSIDQTVEIIHITWVTPRILDLNQINSMNN 360
Query: 361 RLDSWLGKVHTALLSIEAETPDLVA 385
R+ W K T+L +E +T DLVA
Sbjct: 361 RIAEWTEKAKTSLRLVEDDTVDLVA 385
>sp|B0BN93|PSD13_RAT 26S proteasome non-ATPase regulatory subunit 13 OS=Rattus
norvegicus GN=Psmd13 PE=1 SV=1
Length = 376
Score = 265 bits (678), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 149/380 (39%), Positives = 232/380 (61%), Gaps = 10/380 (2%)
Query: 6 YLESLRNDHPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITD 65
+L+ ++ P ++ L +LY KKLWHQLTL++ FV F GD LI+LY NFI++
Sbjct: 7 FLQQSQSSGPGQAAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISE 66
Query: 66 FETKINLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIAMF 125
FE ++N L L + V RQ + A+++LE EK+++++E ++ K I
Sbjct: 67 FEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSSDE-----AVILCKTAIGAL 121
Query: 126 KLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLYL 185
KL GD + K+ +ED + L+++ + SV++ +Y +SS+Y++ A +YK AL +L
Sbjct: 122 KLNIGDLQATKETIEDVEEMLNNLPGV-TSVHSRFYDLSSKYYQTIGNHASYYKDALRFL 180
Query: 186 AYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAF 245
++ L S + + AF L L+ LLG+ ++NFGELL HP++ SL T +WL L AF
Sbjct: 181 GCVDIKDLPVSEQQERAFTLGLAGLLGEGVFNFGELLMHPVLESLRNTDRQWLIDTLYAF 240
Query: 246 NSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSII 305
NSGD+ R+Q L +A QP L NE +LL KI +LCLME+ F+RP+ R + I
Sbjct: 241 NSGDVDRFQTL----KSAWGQQPDLAANEAQLLRKIQLLCLMEMTFTRPANHRQLTFEEI 296
Query: 306 AERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSW 365
A+ K+++ VE L+MK+LSV L+ G ID+V+ VH++WVQPRVL + QIK ++DRL+ W
Sbjct: 297 AKSAKITVNKVELLVMKALSVGLVRGSIDEVDKRVHMTWVQPRVLDLQQIKGMKDRLELW 356
Query: 366 LGKVHTALLSIEAETPDLVA 385
V + L +E + D++
Sbjct: 357 CTDVKSMELLVEHQAQDILT 376
>sp|Q9UNM6|PSD13_HUMAN 26S proteasome non-ATPase regulatory subunit 13 OS=Homo sapiens
GN=PSMD13 PE=1 SV=2
Length = 376
Score = 264 bits (675), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 148/380 (38%), Positives = 233/380 (61%), Gaps = 10/380 (2%)
Query: 6 YLESLRNDHPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITD 65
+L+ +N P ++ L +LY KKLWHQLTL++ FV F GD LI+LY NFI++
Sbjct: 7 FLQQSQNSGPGQPAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISE 66
Query: 66 FETKINLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIAMF 125
FE ++N L L + V RQ + A+++LE EK+++++E ++ K I
Sbjct: 67 FEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSSDE-----AVILCKTAIGAL 121
Query: 126 KLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLYL 185
KL GD + K+ +ED + L+++ + SV++ +Y +SS+Y++ A +YK AL +L
Sbjct: 122 KLNIGDLQVTKETIEDVEEMLNNLPGV-TSVHSRFYDLSSKYYQTIGNHASYYKDALRFL 180
Query: 186 AYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAF 245
++ L S + + AF L L+ LLG+ ++NFGELL HP++ SL T +WL L AF
Sbjct: 181 GCVDIKDLPVSEQQERAFTLGLAGLLGEGVFNFGELLMHPVLESLRNTDRQWLIDTLYAF 240
Query: 246 NSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSII 305
NSG++ R+Q L A QP L NE +LL KI +LCLME+ F+RP+ R + I
Sbjct: 241 NSGNVERFQTL----KTAWGQQPDLAANEAQLLRKIQLLCLMEMTFTRPANHRQLTFEEI 296
Query: 306 AERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSW 365
A+ K+++ +VE L+MK+LSV L++G ID+V+ VH++WVQPRVL + QIK ++DRL+ W
Sbjct: 297 AKSAKITVNEVELLVMKALSVGLVKGSIDEVDKRVHMTWVQPRVLDLQQIKGMKDRLEFW 356
Query: 366 LGKVHTALLSIEAETPDLVA 385
V + + +E + D++
Sbjct: 357 CTDVKSMEMLVEHQAHDILT 376
>sp|Q5E964|PSD13_BOVIN 26S proteasome non-ATPase regulatory subunit 13 OS=Bos taurus
GN=PSMD13 PE=2 SV=1
Length = 376
Score = 262 bits (670), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 149/380 (39%), Positives = 231/380 (60%), Gaps = 10/380 (2%)
Query: 6 YLESLRNDHPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITD 65
+L+ ++ P ++ L +LY KKLWHQLTL++ FV F GD LI+LY NFI++
Sbjct: 7 FLQQSQSSGPGQAAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISE 66
Query: 66 FETKINLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIAMF 125
FE ++N L L + V RQ + A+S+LE EK+++++E ++ K I
Sbjct: 67 FEHRVNPLSLVEIILHVVRQMTDPNVALSFLEKTREKVKSSDE-----AVILCKTAIGAL 121
Query: 126 KLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLYL 185
KL GD + K+ +ED + L ++ + SV++ +Y +SS+Y++ A +YK AL +L
Sbjct: 122 KLNIGDLQVTKETIEDVEEMLSNLPGV-TSVHSRFYDLSSKYYQTIGNHASYYKDALRFL 180
Query: 186 AYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAF 245
++ L S + + AF L L+ LLGD ++NFGELL HP++ SL T +WL L AF
Sbjct: 181 GCVDIKDLPVSEQQERAFTLGLAGLLGDGVFNFGELLMHPVLESLRDTDRQWLIDTLYAF 240
Query: 246 NSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSII 305
NSG++ R+Q L A QP L NE +LL KI +LCLME+ F+RP+ R + I
Sbjct: 241 NSGNVERFQTL----KTAWGQQPDLAANEAQLLRKIQLLCLMEMTFTRPANHRQLTFEEI 296
Query: 306 AERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSW 365
A K+++ +VE L+MK+LSV L++G ID+V+ VH++WVQPRVL + QIK ++DRL+ W
Sbjct: 297 ARSAKITVNEVELLVMKALSVGLVKGSIDEVDKRVHMTWVQPRVLDLQQIKGMKDRLEFW 356
Query: 366 LGKVHTALLSIEAETPDLVA 385
V + + +E + D++
Sbjct: 357 CTDVKSMEMLVEHQAHDILT 376
>sp|Q9WVJ2|PSD13_MOUSE 26S proteasome non-ATPase regulatory subunit 13 OS=Mus musculus
GN=Psmd13 PE=1 SV=1
Length = 376
Score = 261 bits (667), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 147/380 (38%), Positives = 230/380 (60%), Gaps = 10/380 (2%)
Query: 6 YLESLRNDHPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITD 65
+L+ ++ P ++ L +LY KKLWHQLTL++ FV F GD LI+LY NFI++
Sbjct: 7 FLQQSQSSGPGQAAVWHRLEELYTKKLWHQLTLEVLDFVQDPCFAQGDGLIKLYENFISE 66
Query: 66 FETKINLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIAMF 125
FE ++N L L + V RQ + A+++LE EK+++++E ++ K I
Sbjct: 67 FEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSSDE-----AVILCKTAIGAL 121
Query: 126 KLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLYL 185
KL GD + K+ +ED + L+++ + SV++ +Y +SS+Y++ A +YK AL +L
Sbjct: 122 KLNIGDLQATKETIEDVEEMLNNLPGV-TSVHSRFYDLSSKYYQTIGNHASYYKDALRFL 180
Query: 186 AYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAF 245
++ L S + + AF L L+ LLG+ ++NFGELL HP++ SL T +WL L AF
Sbjct: 181 GCVDIKDLPVSEQQERAFTLGLAGLLGEGVFNFGELLMHPVLESLRDTDRQWLIDTLYAF 240
Query: 246 NSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSII 305
NSG + R+Q L A QP L NE +LL KI +LCLME+ F+RP+ R + I
Sbjct: 241 NSGAVDRFQTL----KCAWGQQPDLAANEAQLLRKIQLLCLMEMTFTRPANHRQLTFEEI 296
Query: 306 AERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSW 365
A+ K+++ VE L+MK+LSV L+ G ID+V+ VH++WVQPRVL + QIK ++DRL+ W
Sbjct: 297 AKSAKITVNKVELLVMKALSVGLVRGSIDEVDKRVHMTWVQPRVLDLQQIKGMKDRLELW 356
Query: 366 LGKVHTALLSIEAETPDLVA 385
V + + +E + D++
Sbjct: 357 CTDVKSMEMLVEHQAQDILT 376
>sp|P84169|PSD13_CHICK 26S proteasome non-ATPase regulatory subunit 13 OS=Gallus gallus
GN=PSMD13 PE=1 SV=1
Length = 376
Score = 259 bits (661), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 147/380 (38%), Positives = 233/380 (61%), Gaps = 10/380 (2%)
Query: 6 YLESLRNDHPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITD 65
+L+ ++ P ++ L +LY KKLWHQLTL++ FV F GD LI+LY NFI++
Sbjct: 7 FLQQSQSAGPGQAAVWHRLEELYNKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISE 66
Query: 66 FETKINLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIAMF 125
FE ++N L L + V RQ + A+++LE EK+++++E ++ K I
Sbjct: 67 FEHRVNPLSLVEIILHVVRQMTDPTVALTFLEKTREKVKSSDE-----AVILCKTAIGAL 121
Query: 126 KLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLYL 185
KL GD + K+ +E+ + L+++ + SV++ +Y +SS+Y++ A +YK AL +L
Sbjct: 122 KLNIGDLQVTKETIEEVEEMLNNLPGV-TSVHSRFYDLSSKYYQTIGNHASYYKDALRFL 180
Query: 186 AYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAF 245
V+ L S + + AF L L+ LLG+ +YNFGELL HP++ SL T +WL L AF
Sbjct: 181 GCIDVKDLPVSEQQERAFTLGLAGLLGEGVYNFGELLMHPVLESLRSTDRQWLIDTLYAF 240
Query: 246 NSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSII 305
NSG++ +Q L +A QP L NE LL+KI +LCLME+ F+RP+ R + I
Sbjct: 241 NSGNVETFQAL----KSAWGQQPDLAANEALLLQKIQLLCLMEMTFTRPANHRQLTFEEI 296
Query: 306 AERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSW 365
A+ K+++ +VE L+MK+LSV L++G ID+V+ VH++WVQPRVL + QIK ++DRL+ W
Sbjct: 297 AKSAKVTVNEVELLVMKALSVGLVKGSIDEVDKRVHMTWVQPRVLDLQQIKGMKDRLEFW 356
Query: 366 LGKVHTALLSIEAETPDLVA 385
V + + +E + D++
Sbjct: 357 CTDVRSMEMLVEHQAHDILT 376
>sp|Q04062|RPN9_YEAST 26S proteasome regulatory subunit RPN9 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RPN9 PE=1 SV=1
Length = 393
Score = 196 bits (499), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 123/374 (32%), Positives = 204/374 (54%), Gaps = 17/374 (4%)
Query: 15 PELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITDFETKINLLK 74
P L + Y++KLW QL+ L +F A ++ ++LY NF++ F KIN L
Sbjct: 20 PSLHPLFEQFEKFYEEKLWFQLSESLTKFFDDA--KSTPLRLRLYDNFVSKFYDKINQLS 77
Query: 75 LAHFAVIVSRQYPEKQAAISYLEGV--------IEKLRATNEQRKEEPILYIKMQIAMFK 126
+ + + + + ++ YL+ + +K R + + IL I +IA
Sbjct: 78 VVKYLLASLKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTY 137
Query: 127 LEQGDRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLYLA 186
L + D + + LL+D + TLD I + ++Y +SQY KF +F FY +LLYL+
Sbjct: 138 LLKNDLVKARDLLDDLEKTLDKKDSIPLRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLS 197
Query: 187 -YTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIINSLTG-TKVEWLYYILQA 244
S++ + + LA+DLS+SALLGD IYNFGELL HPI+ ++ + +WL+ +L A
Sbjct: 198 TLEPSTSITLAERQQLAYDLSISALLGDKIYNFGELLHHPIMETIVNDSNYDWLFQLLNA 257
Query: 245 FNSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSI 304
GD ++ L +V + + P L ++E L +KI ++ L+E +F + R +
Sbjct: 258 LTVGDFDKFDSLIKVQISKI---PILAQHESFLRQKICLMTLIETVFVKNI--RMLSFED 312
Query: 305 IAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDS 364
I++ T L ++VEHL+M+++S+ L++G IDQV V +SWVQPR++ QI ++DRL
Sbjct: 313 ISKATHLPKDNVEHLVMRAISLGLLKGSIDQVNELVTISWVQPRIISGDQITKMKDRLVE 372
Query: 365 WLGKVHTALLSIEA 378
W +V +EA
Sbjct: 373 WNDQVEKLGKKMEA 386
>sp|Q9US13|RPN9_SCHPO Probable 26S proteasome regulatory subunit rpn9
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=rpn9 PE=3 SV=1
Length = 381
Score = 192 bits (487), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 121/355 (34%), Positives = 197/355 (55%), Gaps = 18/355 (5%)
Query: 15 PE-LGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDAL---IQLYHNFITDFETKI 70
PE L + Y + DLY++KLW QLT L F F + + + LY NF+ F I
Sbjct: 21 PESLQQSYILMEDLYERKLWKQLTDALIVF-----FDTPETVPLRLPLYTNFVNSFRPNI 75
Query: 71 NLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIAMFKLEQG 130
N LK + + + + A+ L ++ +L +E++ ++ +Y + IA KL G
Sbjct: 76 NQLKAVYMG-LKAFESCSNDEALRNLNQIVNEL---DEEKYKDAYVYSIVAIARIKLISG 131
Query: 131 DRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLYLAYTSV 190
E ++LL +D + ++ ++++YY VS+ Y+K ++A++Y+ LLYL+ +
Sbjct: 132 KLDEARELLVKASKIIDHIDYVESLIHSSYYSVSADYYKAKADYAQYYRHCLLYLSCIDL 191
Query: 191 ESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDL 250
+ S + ++ A DLS++A+LGD IYNFGELL HP+ L GT+ EWL+ ++ A N GDL
Sbjct: 192 DKCSHTELVERAVDLSVAAILGD-IYNFGELLLHPVFELLVGTQHEWLHDLVIAMNVGDL 250
Query: 251 VRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTK 310
++ L + P L + L +KI ++ L+E++F P RT+ IA T+
Sbjct: 251 PLFERLM----GQINKMPLLQSSVALLGQKIRLMALIELVFQLPPNQRTLTFDTIARATR 306
Query: 311 LSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSW 365
+ +VE L+M++LSV LI G+ID+V V +S VQ R+L QI S+ RL W
Sbjct: 307 IPSNEVELLIMRALSVGLITGVIDEVTQIVTISSVQSRILNHSQIASMESRLREW 361
>sp|A1CD85|EIF3M_ASPCL Eukaryotic translation initiation factor 3 subunit M OS=Aspergillus
clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC
3887 / NRRL 1) GN=ACLA_005680 PE=3 SV=1
Length = 471
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 81/180 (45%), Gaps = 3/180 (1%)
Query: 200 DLAFDLSLSALLGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRYQELCRV 259
DLA SAL +++F L A I +L T L+ +L+ F + L Y++
Sbjct: 233 DLAVRALASALKSPAVFDFTSLTAADAIQALR-TSDSSLFELLEIFTADTLDAYEDFVAA 291
Query: 260 HNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLSIEDVEHL 319
A + L + + L K+ +L L I S PS R++P + IA ++ EDVE
Sbjct: 292 TPLASISGGVLADAGEALQNKLRLLTLASIAASAPS--RSLPYATIASALRVPTEDVEKW 349
Query: 320 LMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSWLGKVHTALLSIEAE 379
++ ++ L+EG + Q+ V RV G Q ++ RL W + L + AE
Sbjct: 350 VIDTIRAGLVEGKLSQLRSEFLVHRATYRVFGEKQWAEVQGRLMVWRRSLENVLGVVRAE 409
>sp|Q4WG69|EIF3M_ASPFU Eukaryotic translation initiation factor 3 subunit M OS=Neosartorya
fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 /
FGSC A1100) GN=AFUA_7G03980 PE=3 SV=1
Length = 468
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 3/174 (1%)
Query: 200 DLAFDLSLSALLGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRYQELCRV 259
DLA SAL +++F L A I +L + L+ +L+ F + L Y++
Sbjct: 233 DLAVRALTSALKSPAVFDFTSLTAADAIQALRSSD-STLFELLEIFTADTLDAYEDFIAA 291
Query: 260 HNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLSIEDVEHL 319
+ LV+ + L K+ +L L + S PS R++P + IA ++ +EDVE
Sbjct: 292 TPLETISGGVLVDGAEALQTKMRLLTLASLAASTPS--RSLPYTTIASALRVPVEDVEKW 349
Query: 320 LMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSWLGKVHTAL 373
++ ++ L+EG + Q+ V RV G Q ++ RL W + + L
Sbjct: 350 VIDTIRAGLVEGKLSQLRSEFLVHRATYRVFGEKQWAEVQGRLMVWRRSLESVL 403
>sp|B0YCA6|EIF3M_ASPFC Eukaryotic translation initiation factor 3 subunit M OS=Neosartorya
fumigata (strain CEA10 / CBS 144.89 / FGSC A1163)
GN=AFUB_089510 PE=3 SV=1
Length = 468
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 3/174 (1%)
Query: 200 DLAFDLSLSALLGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRYQELCRV 259
DLA SAL +++F L A I +L + L+ +L+ F + L Y++
Sbjct: 233 DLAVRALTSALKSPAVFDFTSLTAADAIQALRSSD-STLFELLEIFTADTLDAYEDFIAA 291
Query: 260 HNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLSIEDVEHL 319
+ LV+ + L K+ +L L + S PS R++P + IA ++ +EDVE
Sbjct: 292 TPLETISGGVLVDGAEALQTKMRLLTLASLAASTPS--RSLPYTTIASALRVPVEDVEKW 349
Query: 320 LMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSWLGKVHTAL 373
++ ++ L+EG + Q+ V RV G Q ++ RL W + + L
Sbjct: 350 VIDTIRAGLVEGKLSQLRSEFLVHRATYRVFGEKQWAEVQGRLMVWRRSLESVL 403
>sp|A1DC62|EIF3M_NEOFI Eukaryotic translation initiation factor 3 subunit M OS=Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 /
NRRL 181) GN=NFIA_024940 PE=3 SV=1
Length = 468
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 3/174 (1%)
Query: 200 DLAFDLSLSALLGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRYQELCRV 259
DLA SAL +++F L A I +L + L+ +L+ F + L Y++
Sbjct: 233 DLAVRALTSALKSPGVFDFTSLTAADAIQALRSSD-STLFELLEIFTADTLDAYEDFIAA 291
Query: 260 HNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLSIEDVEHL 319
+ L + + L K+ +L L + S PS R++P + IA ++ +EDVE
Sbjct: 292 TPLETISGGVLADGAEALQTKMRLLTLASLAASTPS--RSLPYATIASALRVPVEDVEKW 349
Query: 320 LMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSWLGKVHTAL 373
++ ++ L+EG + Q+ V RV G Q ++ RL W + + L
Sbjct: 350 VIDTIRAGLVEGKLSQLRSEFLVHRATYRVFGEKQWAEVQGRLMVWRRSLESVL 403
>sp|Q1DQB2|EIF3M_COCIM Eukaryotic translation initiation factor 3 subunit M
OS=Coccidioides immitis (strain RS) GN=CIMG_07501 PE=3
SV=1
Length = 465
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 5/207 (2%)
Query: 178 YKCALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIINSLTGTKVEW 237
Y +L L S + +LA +SAL +++F L + I +L +
Sbjct: 219 YNHVILALQAIPPSEASSNEARELAVRALISALTYPFVFDFTPLTSSDAIQNLRSAEPS- 277
Query: 238 LYYILQAFNSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSED 297
L+ +L+ F S L Y+E + + L + L E+ + L K+ +L L + S PS
Sbjct: 278 LFELLEIFASDTLDAYEEFIK--STPLSSMHNLAESAEILQNKMRVLTLASLAASTPS-- 333
Query: 298 RTIPLSIIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKS 357
R++P I+ ++ EDVE ++ ++ L+EG + Q++G V RV G Q
Sbjct: 334 RSLPYDSISNALRIPREDVEKWVIDTIRAGLVEGKLSQLKGEFLVHRATYRVFGERQWAE 393
Query: 358 LRDRLDSWLGKVHTALLSIEAETPDLV 384
++ RL W + L I +E V
Sbjct: 394 VQGRLMVWRRSLENVLGVIHSEKEKFV 420
>sp|B4P6M6|EIF3M_DROYA Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
yakuba GN=Tango7 PE=2 SV=1
Length = 387
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 114/266 (42%), Gaps = 29/266 (10%)
Query: 133 KECKKLLEDGKSTLDSMTDID--PSVYANYYWVSSQYHKFHQEFAEFYKCALLYLAYTSV 190
K+C+++LE T +D S +AN S Q K ++ + K L L+ +
Sbjct: 134 KQCEQVLE-------VFTGVDQLKSQFANCPPSSEQMQKLYRLLHDVTKDTNLELSSKVM 186
Query: 191 ESLSDSFKLDLA-------FDLSLSALLGDNIYNFGELLAHPIINSLTGTKVEWLYYILQ 243
L ++ D A ++AL N + LLA + L G + ++ +L
Sbjct: 187 IELLGTYTADNACVAREDAMKCIVTALADPNTFLLDPLLALKPVRFLEG---DLIHDLLS 243
Query: 244 AFNSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLS 303
F S L Y + H + +Q N ++ ++K+ +L M++ S P +
Sbjct: 244 IFVSEKLPAYVQFYEDHREFVNSQGL---NHEQNMKKMRLLTFMQLAESSPE----MTFE 296
Query: 304 IIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLD 363
+ + +++ ++VE +++ L L+ +DQ VH++ R G PQ + LRD L
Sbjct: 297 TLTKELQINEDEVEPFVIEVLKTKLVRARLDQANHKVHITSTMHRTFGAPQWEQLRDLLQ 356
Query: 364 SW---LGKVHTALLSIEAETPDLVAS 386
+W L V L S+ + DL S
Sbjct: 357 AWKENLSTVREGLTSVSSAQVDLARS 382
>sp|B4QFD2|EIF3M_DROSI Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
simulans GN=Tango7 PE=3 SV=1
Length = 387
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 114/264 (43%), Gaps = 25/264 (9%)
Query: 133 KECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLYLAYTSVES 192
K+C+++LE + S D S +AN S Q K ++ + K L L+ +
Sbjct: 134 KQCEQVLE-----VFSGVDQLKSQFANCPPSSEQMQKLYRLLHDVTKDTNLELSSKVMIE 188
Query: 193 LSDSFKLDLA-------FDLSLSALLGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAF 245
L ++ D A ++AL N + LL+ + L G + ++ +L F
Sbjct: 189 LLGTYTADNACVAREDAMKCIVTALADPNTFLLDPLLSLKPVRFLEG---DLIHDLLSIF 245
Query: 246 NSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSII 305
S L Y + H + +Q N ++ ++K+ +L M++ S P + +
Sbjct: 246 VSEKLPAYVQFYEDHREFVNSQGL---NHEQNMKKMRLLTFMQLAESSPE----MTFETL 298
Query: 306 AERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSW 365
+ +++ ++VE +++ L L+ +DQ VH+S R G PQ + LRD L +W
Sbjct: 299 TKELQINEDEVEPFVIEVLKTKLVRARLDQANQKVHISSTMHRTFGAPQWEQLRDLLQAW 358
Query: 366 ---LGKVHTALLSIEAETPDLVAS 386
L V L S+ + DL S
Sbjct: 359 KENLSTVREGLTSVSSAQLDLARS 382
>sp|B4HR14|EIF3M_DROSE Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
sechellia GN=Tango7 PE=3 SV=1
Length = 387
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 114/264 (43%), Gaps = 25/264 (9%)
Query: 133 KECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLYLAYTSVES 192
K+C+++LE + S D S +AN S Q K ++ + K L L+ +
Sbjct: 134 KQCEQVLE-----VFSGVDQLKSQFANCPPSSEQMQKLYRLLHDVTKDTNLELSSKVMIE 188
Query: 193 LSDSFKLDLA-------FDLSLSALLGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAF 245
L ++ D A ++AL N + LL+ + L G + ++ +L F
Sbjct: 189 LLGTYTADNACVAREDAMKCIVTALADPNTFLLDPLLSLKPVRFLEG---DLIHDLLSIF 245
Query: 246 NSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSII 305
S L Y + H + +Q N ++ ++K+ +L M++ S P + +
Sbjct: 246 VSEKLPAYVQFYEDHREFVNSQGL---NHEQNMKKMRLLTFMQLAESSPE----MTFETL 298
Query: 306 AERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSW 365
+ +++ ++VE +++ L L+ +DQ VH+S R G PQ + LRD L +W
Sbjct: 299 TKELQINEDEVEPFVIEVLKTKLVRARLDQANQKVHISSTMHRTFGAPQWEQLRDLLQAW 358
Query: 366 ---LGKVHTALLSIEAETPDLVAS 386
L V L S+ + DL S
Sbjct: 359 KENLSTVREGLTSVSSAQLDLARS 382
>sp|Q7JVI3|EIF3M_DROME Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
melanogaster GN=Tango7 PE=2 SV=1
Length = 387
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 114/264 (43%), Gaps = 25/264 (9%)
Query: 133 KECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLYLAYTSVES 192
K+C+++LE + S D S +AN S Q K ++ + K L L+ +
Sbjct: 134 KQCEQVLE-----VFSGVDQLKSQFANCPPSSEQMQKLYRLLHDVTKDTNLELSSKVMIE 188
Query: 193 LSDSFKLDLA-------FDLSLSALLGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAF 245
L ++ D A ++AL N + LL+ + L G + ++ +L F
Sbjct: 189 LLGTYTADNACVAREDAMKCIVTALADPNTFLLDPLLSLKPVRFLEG---DLIHDLLSIF 245
Query: 246 NSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSII 305
S L Y + H + +Q N ++ ++K+ +L M++ S P + +
Sbjct: 246 VSEKLPAYVQFYEDHREFVNSQGL---NHEQNMKKMRLLTFMQLAESSPE----MTFETL 298
Query: 306 AERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSW 365
+ +++ ++VE +++ L L+ +DQ VH+S R G PQ + LRD L +W
Sbjct: 299 TKELQINEDEVEPFVIEVLKTKLVRARLDQANQKVHISSTMHRTFGAPQWEQLRDLLQAW 358
Query: 366 ---LGKVHTALLSIEAETPDLVAS 386
L V L S+ + DL S
Sbjct: 359 KENLSTVREGLTSVSSAQLDLARS 382
>sp|B3NRC6|EIF3M_DROER Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
erecta GN=Tango7 PE=3 SV=1
Length = 387
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 114/266 (42%), Gaps = 29/266 (10%)
Query: 133 KECKKLLEDGKSTLDSMTDID--PSVYANYYWVSSQYHKFHQEFAEFYKCALLYLAYTSV 190
K+C+++LE T +D S +AN S Q K ++ + K L L+ +
Sbjct: 134 KQCEQVLE-------VFTGVDQLKSQFANCPPSSEQMQKLYRLLHDVTKDTNLELSSKVM 186
Query: 191 ESLSDSFKLDLA-------FDLSLSALLGDNIYNFGELLAHPIINSLTGTKVEWLYYILQ 243
L ++ D A ++AL N + LLA + L G + ++ +L
Sbjct: 187 IELLGTYTADNACVAREDAMKCIVTALADPNTFLLDPLLALKPVRFLEG---DLIHDLLS 243
Query: 244 AFNSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLS 303
F S L Y + H + +Q N ++ ++K+ +L M++ S P +
Sbjct: 244 IFVSEKLPAYVQFYEDHREFVNSQGL---NHEQNMKKMRLLTFMQLAESSPE----MTFE 296
Query: 304 IIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLD 363
+ + +++ ++VE +++ L L+ +DQ VH++ R G PQ + LRD L
Sbjct: 297 TLTKELQINEDEVEPFVIEVLKTKLVRARLDQANHKVHITSTMHRTFGAPQWEQLRDLLQ 356
Query: 364 SW---LGKVHTALLSIEAETPDLVAS 386
+W L V L S+ + DL S
Sbjct: 357 AWKENLSTVREGLTSVSSAQLDLARS 382
>sp|B3MCZ5|EIF3M_DROAN Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
ananassae GN=Tango7 PE=3 SV=1
Length = 387
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 112/263 (42%), Gaps = 29/263 (11%)
Query: 133 KECKKLLEDGKSTLDSMTDID--PSVYANYYWVSSQYHKFHQEFAEFYKCALLYLAYTSV 190
K+C ++LE T +D S +AN S Q K ++ + K L L+ +
Sbjct: 134 KQCDQVLE-------VFTGVDQLKSQFANCPPSSEQMQKLYRLLHDVTKDTNLELSSKVM 186
Query: 191 ESLSDSFKLDLA-------FDLSLSALLGDNIYNFGELLAHPIINSLTGTKVEWLYYILQ 243
L ++ D A ++AL N + LL+ + L G + ++ +L
Sbjct: 187 IELLGTYTADNACVAREDAMKCIVTALADPNTFLLDPLLSLKPVRFLEG---DLIHDLLS 243
Query: 244 AFNSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLS 303
F S L Y + H + +Q N ++ ++K+ +L M++ S P +
Sbjct: 244 IFVSDKLPSYVQFYEDHKEFVNSQGL---NHEQNMKKMRLLTFMQLAESSPE----MTFD 296
Query: 304 IIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLD 363
+ + +++ ++VE +++ L L+ +DQ VH+S R G PQ + LRD L
Sbjct: 297 TLTKELQITEDEVEPFVIEVLKTKLVRARLDQANRKVHISSTMHRTFGAPQWEQLRDLLQ 356
Query: 364 SW---LGKVHTALLSIEAETPDL 383
+W L V L ++ A DL
Sbjct: 357 AWKENLSSVREGLTNVSAAQLDL 379
>sp|B4GDM5|EIF3M_DROPE Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
persimilis GN=Tango7 PE=3 SV=1
Length = 387
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 114/266 (42%), Gaps = 29/266 (10%)
Query: 133 KECKKLLEDGKSTLDSMTDID--PSVYANYYWVSSQYHKFHQEFAEFYKCALLYLAYTSV 190
K+C+++LE T +D + +AN S Q K ++ + K + L+ +
Sbjct: 134 KQCEQVLE-------VFTGVDQLKTQFANCPPSSEQMQKLYRLLHDVTKDTNMELSSKVM 186
Query: 191 ESLSDSFKLDLA-------FDLSLSALLGDNIYNFGELLAHPIINSLTGTKVEWLYYILQ 243
L ++ D A ++AL N + LLA + L G + ++ +L
Sbjct: 187 IELLGTYTADNACVAREDAMKCIVTALADPNTFLLDPLLALKPVRFLEG---DLIHDLLS 243
Query: 244 AFNSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLS 303
F S L Y + H + +Q N ++ ++K+ +L M++ S P +
Sbjct: 244 IFVSDKLPSYVQFYEDHKEFVNSQGL---NHEQNMKKMRLLTFMQLAESNPE----MTFD 296
Query: 304 IIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLD 363
+ + +++ ++VE +++ L L+ +DQ VH+S R G PQ + LRD L
Sbjct: 297 TLTKELQITEDEVEPFVIQVLKTKLVRARLDQANRKVHISSTMHRTFGAPQWEQLRDLLQ 356
Query: 364 SW---LGKVHTALLSIEAETPDLVAS 386
+W L V L ++ + DL +
Sbjct: 357 AWKENLSSVRDGLTNVSSAQLDLART 382
>sp|Q2UDZ9|EIF3M_ASPOR Eukaryotic translation initiation factor 3 subunit M OS=Aspergillus
oryzae (strain ATCC 42149 / RIB 40) GN=AO090026000816
PE=3 SV=1
Length = 466
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 3/166 (1%)
Query: 200 DLAFDLSLSALLGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRYQELCRV 259
DLA SAL +++F L A + +L + L+ +L+ F + L Y+
Sbjct: 234 DLAIRALTSALTHPAVFDFTPLTASDAVQALRSSD-STLFELLEIFTADTLDAYEAFVTA 292
Query: 260 HNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLSIEDVEHL 319
A + L + + L K+ +L L + S PS R++P + IA ++ EDVE
Sbjct: 293 TPLAGISGGVLADAGEALQNKMRLLTLASLAASTPS--RSLPYATIAASLRVPAEDVEKW 350
Query: 320 LMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSW 365
++ ++ L+EG + Q+ V RV G Q ++ RL W
Sbjct: 351 VIDTIRAGLVEGKLSQLRSEFLVHRATYRVFGEKQWAEVQGRLMVW 396
>sp|B4KT65|EIF3M_DROMO Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
mojavensis GN=Tango7 PE=3 SV=1
Length = 387
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 113/266 (42%), Gaps = 29/266 (10%)
Query: 133 KECKKLLEDGKSTLDSMTDID--PSVYANYYWVSSQYHKFHQEFAEFYKCALLYLAYTSV 190
K+C ++LE T +D S +AN S Q K ++ + K L L+ +
Sbjct: 134 KQCDQVLE-------VFTGVDQLKSQFANCPPSSEQMQKLYRLLHDVTKDTNLELSSKVM 186
Query: 191 ESLSDSFKLDLA-------FDLSLSALLGDNIYNFGELLAHPIINSLTGTKVEWLYYILQ 243
L ++ D A ++AL N + LL+ + L G + ++ +L
Sbjct: 187 IELLGTYTADNACVAREDAMKCIVTALADPNTFLLDPLLSLKPVRFLEG---DLIHDLLS 243
Query: 244 AFNSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLS 303
F S L Y + H + +Q N ++ ++K+ +L M++ S P +
Sbjct: 244 IFVSDKLPSYVQFYEDHKEFVNSQGL---NHEQNMKKMRLLTFMQLAESYPE----MTFD 296
Query: 304 IIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLD 363
+ + +++ ++VE +++ L L+ +DQ VH+S R G PQ + LRD L
Sbjct: 297 TLTKELQINEDEVEPFVIEVLKTKLVRARLDQANRKVHISSTMHRTFGAPQWEQLRDLLQ 356
Query: 364 SW---LGKVHTALLSIEAETPDLVAS 386
+W L V L ++ + DL S
Sbjct: 357 AWKENLSSVREGLTNVSSAQLDLARS 382
>sp|Q0CPV5|EIF3M_ASPTN Eukaryotic translation initiation factor 3 subunit M OS=Aspergillus
terreus (strain NIH 2624 / FGSC A1156) GN=ATEG_04279
PE=3 SV=1
Length = 461
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 3/180 (1%)
Query: 200 DLAFDLSLSALLGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRYQELCRV 259
DLA SAL +++F L A + +L T L+ +L+ F + L Y+
Sbjct: 232 DLAVRALTSALSHPAVFDFTPLTASDAVQALR-TSDSTLFELLEIFTADTLDAYEAFVAA 290
Query: 260 HNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLSIEDVEHL 319
A + L L K+ +L L + S PS R++P + IA ++ EDVE
Sbjct: 291 TPLASISGGVLAPAADALQNKMRLLTLASLAASTPS--RSLPYATIASALRVPAEDVEKW 348
Query: 320 LMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSWLGKVHTALLSIEAE 379
++ ++ L+EG + Q+ V RV G Q ++ RL W + L + +E
Sbjct: 349 VIDTIRAGLVEGKLSQLRSEFLVHRATYRVFGEKQWAEVQGRLMVWRRSLENVLGVVRSE 408
>sp|Q292F0|EIF3M_DROPS Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
pseudoobscura pseudoobscura GN=Tango7 PE=3 SV=1
Length = 387
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 111/258 (43%), Gaps = 29/258 (11%)
Query: 133 KECKKLLEDGKSTLDSMTDID--PSVYANYYWVSSQYHKFHQEFAEFYKCALLYLAYTSV 190
K+C+++LE T +D + +AN S Q K ++ + K + L+ +
Sbjct: 134 KQCEQVLE-------VFTGVDQLKTQFANCPPSSEQMQKLYRLLHDVTKDTNMELSSKVM 186
Query: 191 ESLSDSFKLDLA-------FDLSLSALLGDNIYNFGELLAHPIINSLTGTKVEWLYYILQ 243
L ++ D A ++AL N + LLA + L G + ++ +L
Sbjct: 187 IELLGTYTADNACVAREDAMKCIVTALADPNTFLLDPLLALKPVRFLEG---DLIHDLLS 243
Query: 244 AFNSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLS 303
F S L Y + H + +Q N ++ ++K+ +L M++ S P +
Sbjct: 244 IFVSDKLPSYVQFYEDHKEFVNSQGL---NHEQNMKKMRLLTFMQLAESNPE----MTFD 296
Query: 304 IIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLD 363
+ + +++ ++VE +++ L L+ +DQ VH+S R G PQ + LRD L
Sbjct: 297 TLTKELQITEDEVEPFVIQVLKTKLVRARLDQANRKVHISSTMHRTFGAPQWEQLRDLLQ 356
Query: 364 SW---LGKVHTALLSIEA 378
+W L V L ++ +
Sbjct: 357 AWKENLSSVRDGLTNVSS 374
>sp|B4JW83|EIF3M_DROGR Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
grimshawi GN=Tango7 PE=3 SV=1
Length = 387
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 112/266 (42%), Gaps = 29/266 (10%)
Query: 133 KECKKLLEDGKSTLDSMTDID--PSVYANYYWVSSQYHKFHQEFAEFYKCALLYLAYTSV 190
K+C ++LE T +D S +AN S Q K ++ + K L L+ +
Sbjct: 134 KQCDQVLE-------VFTGVDQLKSQFANCPPSSEQMQKLYRLLHDVTKDTNLELSSKVM 186
Query: 191 ESLSDSFKLDLA-------FDLSLSALLGDNIYNFGELLAHPIINSLTGTKVEWLYYILQ 243
L ++ D A ++AL N + LL+ + L G + ++ +L
Sbjct: 187 IELLGTYTADNACVAREDAMKCIVTALADPNTFLLDPLLSLKPVRFLEG---DLIHDLLS 243
Query: 244 AFNSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLS 303
F S L Y + H + +Q N + ++K+ +L M++ S P +
Sbjct: 244 IFVSDKLPSYVQFYEDHKEFVNSQGL---NHDQNMKKMRLLTFMQLAESYPE----MSFD 296
Query: 304 IIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLD 363
+ + +++ ++VE +++ L L+ +DQ VH+S R G PQ + LRD L
Sbjct: 297 TLTKELQINDDEVEPFVIEVLKTKLVRARLDQANRKVHISSTMHRTFGAPQWEQLRDLLQ 356
Query: 364 SW---LGKVHTALLSIEAETPDLVAS 386
+W L V L ++ + DL +
Sbjct: 357 AWKENLSSVREGLTNVSSAQLDLART 382
>sp|B4LJT9|EIF3M_DROVI Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
virilis GN=Tango7 PE=3 SV=1
Length = 387
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 112/266 (42%), Gaps = 29/266 (10%)
Query: 133 KECKKLLEDGKSTLDSMTDID--PSVYANYYWVSSQYHKFHQEFAEFYKCALLYLAYTSV 190
K+C ++LE T +D S +AN S Q K ++ + K L L+ +
Sbjct: 134 KQCDQVLE-------VFTGVDQLKSQFANCPPSSEQMQKLYRLLHDVTKDTNLELSSKVM 186
Query: 191 ESLSDSFKLDLA-------FDLSLSALLGDNIYNFGELLAHPIINSLTGTKVEWLYYILQ 243
L ++ D A ++AL N + LL+ + L G + ++ +L
Sbjct: 187 IELLGTYTADNACVAREDAMKCIVTALADPNTFLLDPLLSLKPVRFLEG---DLIHDLLS 243
Query: 244 AFNSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLS 303
F S L Y + H + +Q N ++ ++K+ +L M++ S P +
Sbjct: 244 IFVSDKLPSYVQFYEDHKEFVNSQGL---NHEQNMKKMRLLTFMQLAESYPE----MTFD 296
Query: 304 IIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLD 363
+ + ++ ++VE +++ L L+ +DQ VH+S R G PQ + LRD L
Sbjct: 297 TLTKELQIGEDEVEPFVIEVLKTKLVRARLDQANRKVHISSTMHRTFGAPQWEQLRDLLQ 356
Query: 364 SW---LGKVHTALLSIEAETPDLVAS 386
+W L V L ++ + DL +
Sbjct: 357 AWKENLSSVREGLTNVSSAQLDLART 382
>sp|B0WTN3|EIF3M_CULQU Eukaryotic translation initiation factor 3 subunit M OS=Culex
quinquefasciatus GN=CPIJ010525 PE=3 SV=1
Length = 386
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 10/170 (5%)
Query: 196 SFKLDLAFDLSLSALLGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRYQE 255
S+ + A ++AL N + LL+ + L G E ++ +L F S L Y +
Sbjct: 202 SYAREDAMKCIVTALADPNTFLLDPLLSLKPVRFLEG---ELIHDLLSVFVSEKLPAYLQ 258
Query: 256 LCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLSIED 315
+ H + +Q N ++ ++K+ +L M++ S P + + + + ++ D
Sbjct: 259 FYQNHKEFVNSQGL---NHEQNIKKMRLLSFMQLAESNPE----MTFAQLQDELQIGEND 311
Query: 316 VEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSW 365
VE +++ L L+ +DQ VH+S R G PQ + LRD L +W
Sbjct: 312 VEPFIIEVLKTKLVRARMDQKARKVHISSTMHRTFGRPQWQQLRDLLHAW 361
>sp|Q7SEK1|EIF3M_NEUCR Eukaryotic translation initiation factor 3 subunit M OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=NCU02813 PE=3 SV=1
Length = 434
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 94/223 (42%), Gaps = 28/223 (12%)
Query: 172 QEFAEFYKCALLYLAYTSVESLSDSFKLDLAFDLSLSALL----GDNIYNFGELLAHPII 227
QE + FY LL T D D A LSL AL ++F +L + P +
Sbjct: 180 QEESYFY---LLKALATFDRDNQDEVASDEAQKLSLRALRMAISSPTRFDFNDLRSLPSV 236
Query: 228 NSLTGTKVEWLYYILQAFNSGDLVRYQELCRVHNAALRAQPALVENEK----KLLEKINI 283
++L+ + + +L F DL Y + H +ENEK KL K+ +
Sbjct: 237 HALSDSHPVY-SQLLDIFTEQDLEDYNDFRDEHQG-------WIENEKLDHEKLQRKMRL 288
Query: 284 LCLMEIIFSRPSEDRTIPLSIIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVS 343
L + S P+ R IP + IA+ ++ EDVE + + L+EG + Q + V
Sbjct: 289 LTFASLAASTPN--REIPYASIAKALQIPDEDVEMWTIDVIRSKLVEGRLSQKQKVFLVH 346
Query: 344 WVQPRVLGIPQIKSLRDRLDSW-------LGKVHTALLSIEAE 379
RV G Q + L R+D + +G V A +EA+
Sbjct: 347 RTTYRVFGEKQWRELGTRVDQFKTVVDRLVGVVRKAQTDVEAQ 389
>sp|Q17D30|EIF3M_AEDAE Eukaryotic translation initiation factor 3 subunit M OS=Aedes
aegypti GN=AAEL004347 PE=3 SV=1
Length = 386
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 10/170 (5%)
Query: 196 SFKLDLAFDLSLSALLGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRYQE 255
S+ + A ++AL N + LL+ + L G E ++ +L F S L Y +
Sbjct: 202 SYAREDAMKCIVTALADPNTFLLDPLLSLKPVRFLEG---ELIHDLLSVFVSEKLPSYLQ 258
Query: 256 LCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLSIED 315
+ H + +Q N ++ ++K+ +L M++ S P + + + ++ +
Sbjct: 259 FYKNHKEFVNSQGL---NHEQNIKKMRLLSFMQLAESNPE----MTFQQLQDELQIGENE 311
Query: 316 VEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSW 365
VE +++ L L+ +DQ VH+S R G PQ + LRD L +W
Sbjct: 312 VEPFIIEVLKTKLVRARMDQKARKVHISSTMHRTFGRPQWQQLRDLLHAW 361
>sp|Q7Q068|EIF3M_ANOGA Eukaryotic translation initiation factor 3 subunit M OS=Anopheles
gambiae GN=AGAP012281 PE=3 SV=2
Length = 385
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 10/170 (5%)
Query: 196 SFKLDLAFDLSLSALLGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRYQE 255
S+ + A ++AL N + LL+ + L G E ++ +L F S L Y E
Sbjct: 201 SYAREDAMKCIVTALADPNTFLLDPLLSLKPVRFLEG---ELIHDLLSVFVSEKLPSYLE 257
Query: 256 LCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLSIED 315
+ H + +Q N ++ ++K+ +L M++ S + + + + ++ E+
Sbjct: 258 FYKNHKEFVNSQGL---NHEQNIKKMRLLSFMQLAES----NSEMTFQQLQDELQIKEEE 310
Query: 316 VEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSW 365
VE +++ L L+ +DQ VH+S R G PQ + LRD L SW
Sbjct: 311 VEPFIIEVLKTKLVRARMDQRARKVHISSTMHRTFGRPQWQQLRDLLLSW 360
>sp|B4MY75|EIF3M_DROWI Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
willistoni GN=Tango7 PE=3 SV=1
Length = 387
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 111/266 (41%), Gaps = 29/266 (10%)
Query: 133 KECKKLLEDGKSTLDSMTDID--PSVYANYYWVSSQYHKFHQEFAEFYKCALLYLAYTSV 190
K+C ++LE T +D S +AN S Q K ++ + K L + +
Sbjct: 134 KQCDQVLE-------VFTGVDQLKSQFANCPPSSEQMQKLYRLLHDVTKDTNLERSSKVM 186
Query: 191 ESLSDSFKLDLA-------FDLSLSALLGDNIYNFGELLAHPIINSLTGTKVEWLYYILQ 243
L ++ D A ++AL N + LL+ + L G + ++ +L
Sbjct: 187 IELLGTYTADNACVAREDAMKCIVTALADPNTFLLDPLLSLKPVRFLEG---DLIHDLLS 243
Query: 244 AFNSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLS 303
F S L Y E H + +Q N ++ ++K+ +L M++ S + +
Sbjct: 244 IFVSEKLPAYVEFYEEHKEFVNSQGL---NHEQNMKKMRLLTFMQLAES----NAEMSFE 296
Query: 304 IIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLD 363
+ + +++ +VE +++ L L+ +DQ VH+S R G PQ + LRD L
Sbjct: 297 ALTKELQITENEVEPFVIEVLKTKLVRARLDQANRKVHISSTMHRTFGAPQWEQLRDLLQ 356
Query: 364 SW---LGKVHTALLSIEAETPDLVAS 386
+W L V L ++ + DL S
Sbjct: 357 AWKENLSSVREGLTNVASAQLDLARS 382
>sp|Q6CB51|EIF3M_YARLI Eukaryotic translation initiation factor 3 subunit M OS=Yarrowia
lipolytica (strain CLIB 122 / E 150) GN=YALI0C21890g
PE=3 SV=1
Length = 400
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 14/169 (8%)
Query: 209 ALLGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRYQELCRVHNAALRAQP 268
AL D++Y+FG +LA + L T+ + L+ +L SG++ + Q L AA A+
Sbjct: 223 ALKSDHVYDFGSILALEPVEDLKTTE-QRLFELLTTVASGEVAKMQSL-----AAGDAKS 276
Query: 269 ALVENE---KKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLSIEDVEHLLMKSLS 325
+ EN+ + LL K ++ L + P I SIIA+ +S++ VE ++ ++
Sbjct: 277 LIEENDFDAESLLAKTRVIALANLAAESPE----IEYSIIAKNLDVSLDTVELWVIDTIR 332
Query: 326 VHLIEGIIDQVEGTVHVSWVQPR-VLGIPQIKSLRDRLDSWLGKVHTAL 373
L+EG + Q + + V Q + + + +LD W ++ L
Sbjct: 333 AGLVEGRLSQTKQSFAVHRAQKSGPIAKADWEVISQKLDVWKKSINDVL 381
>sp|A7SPX9|EIF3M_NEMVE Eukaryotic translation initiation factor 3 subunit M
OS=Nematostella vectensis GN=v1g192238 PE=3 SV=1
Length = 379
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 77/159 (48%), Gaps = 10/159 (6%)
Query: 207 LSALLGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRYQELCRVHNAALRA 266
+S L N+ +L+ + L G + Y +LQ F SGD+ Y+ + +++
Sbjct: 211 VSCLTKPNVLIMDNILSLKPVAVLQGDPI---YQLLQIFVSGDVQDYK---KFYDSNTDF 264
Query: 267 QPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLSIEDVEHLLMKSLSV 326
++ + + L+K+ +L LM I E I +A + +S +++E L++++
Sbjct: 265 INSIGLSHEMNLKKMRVLTLMSI----GKETDEISYEDLATKLGISSDEIEQFLIEAIQT 320
Query: 327 HLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSW 365
L++ +DQV V +S V R GI Q ++L RL W
Sbjct: 321 GLVKARLDQVHRKVIISSVAQRTFGINQWQNLHSRLVKW 359
>sp|Q0UXJ7|EIF3M_PHANO Eukaryotic translation initiation factor 3 subunit M
OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 /
FGSC 10173) GN=SNOG_03517 PE=3 SV=2
Length = 441
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 79/172 (45%), Gaps = 5/172 (2%)
Query: 208 SALLGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRYQELCRVHNAALRAQ 267
SAL ++F +L I +L + + +L+ FNS L Y + H+ + +
Sbjct: 231 SALTHPTHFDFQDLTDLDSIQALRNSD-PIFFQLLEIFNSDLLDDYNDFKDEHDGWVE-E 288
Query: 268 PALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLSIEDVEHLLMKSLSVH 327
L + L K+ +L L + S + R++P IA+ ++S E+VE ++ +
Sbjct: 289 SGL--DGAALNRKMRLLTLASMAAS-AGQTRSLPYDKIAKALQISSEEVEMWVIDVIRAG 345
Query: 328 LIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSWLGKVHTALLSIEAE 379
L+EG + Q+ T + RV G Q + + RLD W + L I+AE
Sbjct: 346 LVEGKLSQLNQTFLIHRSTYRVFGDNQWREVSSRLDMWRNSLTGVLQVIQAE 397
>sp|Q5ZJ64|EIF3M_CHICK Eukaryotic translation initiation factor 3 subunit M OS=Gallus
gallus GN=EIF3M PE=2 SV=1
Length = 374
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 13/173 (7%)
Query: 207 LSALLGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRYQELCRVHNAALRA 266
+ AL N + F LLA + L G E ++ +L F S LV Y + + + + +
Sbjct: 209 VRALKDPNTFLFDHLLALKPVKFLEG---ELIHDLLTIFVSAKLVSYVKFYQNNKDFIDS 265
Query: 267 QPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLSIEDVEHLLMKSLSV 326
L E + K+ +L M + E++ I + + ++ +DVE ++ ++
Sbjct: 266 LGLLHEQN---MAKMRLLTFMGMAV----ENKEISFDTMQQELQIGADDVEAFVIDAVKT 318
Query: 327 HLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSW---LGKVHTALLSI 376
++ IDQ + V VS R G Q + L D L++W L +V +LLS+
Sbjct: 319 KMVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNTWKQNLNQVKNSLLSL 371
>sp|Q7T3B0|EIF3M_DANRE Eukaryotic translation initiation factor 3 subunit M OS=Danio rerio
GN=eif3m PE=2 SV=2
Length = 375
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 10/173 (5%)
Query: 209 ALLGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRYQELCRVHNAALRAQP 268
AL N Y F LLA + L G E ++ +L F S L+ Y + + + + +
Sbjct: 211 ALKDPNTYLFDHLLALKPVRFLEG---ELIHDLLTIFVSAKLISYVKFYQSNKDFIES-- 265
Query: 269 ALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLSIEDVEHLLMKSLSVHL 328
L + ++ + K+ +L M + E + I + + ++ EDVE ++ ++ +
Sbjct: 266 -LGLSHEQNMSKMRLLTFMGMAV----EMKEISFETMQQELQIGAEDVEAFVIDAVRTKM 320
Query: 329 IEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSWLGKVHTALLSIEAETP 381
+ IDQ + V VS R G Q + L D L SW + T S++ +P
Sbjct: 321 VYSKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLCSWKQNLSTVKSSLQTLSP 373
>sp|Q55BD5|CSN7_DICDI COP9 signalosome complex subunit 7 OS=Dictyostelium discoideum
GN=csn7 PE=1 SV=1
Length = 259
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 78/158 (49%), Gaps = 15/158 (9%)
Query: 209 ALLGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRYQELCRVHNAALRAQP 268
AL +++ FGELL P + L T+ + Y +L F G + Y+ ++ + P
Sbjct: 36 ALNHPSVFVFGELLDMPNVQQLKETEFKNYYDLLLIFAYGSFIDYK---NKKDSLPQLTP 92
Query: 269 ALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLS-IEDVEHLLMKSLSVH 327
++ K+L I+F S IP S++ E+ +++ + ++E L++ S+ +
Sbjct: 93 QMITKLKQLT----------IVF-LSSTSNVIPYSVLQEQIEITNVRELEDLIIDSIYQN 141
Query: 328 LIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSW 365
+I+G +DQ + + + R + Q+ S+ + L++W
Sbjct: 142 IIKGKLDQKNKHLEIDFSIGRDVQPEQLDSMINCLNNW 179
>sp|Q99JX4|EIF3M_MOUSE Eukaryotic translation initiation factor 3 subunit M OS=Mus
musculus GN=Eif3m PE=2 SV=1
Length = 374
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 13/173 (7%)
Query: 207 LSALLGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRYQELCRVHNAALRA 266
+ AL N + F LL + L G E ++ +L F S L Y + + + + +
Sbjct: 209 VRALKDPNAFLFDHLLTLKPVKFLEG---ELIHDLLTIFVSAKLASYVKFYQNNKDFIDS 265
Query: 267 QPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLSIEDVEHLLMKSLSV 326
L E + K+ +L M + E++ I + + ++ +DVE ++ ++
Sbjct: 266 LGLLHEQN---MAKMRLLTFMGMAV----ENKEISFDTMQQELQIGADDVEAFVIDAVRT 318
Query: 327 HLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSW---LGKVHTALLSI 376
++ IDQ + V VS R G Q + L D L++W L KV +LLS+
Sbjct: 319 KMVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNLNKVKNSLLSL 371
>sp|Q7L2H7|EIF3M_HUMAN Eukaryotic translation initiation factor 3 subunit M OS=Homo
sapiens GN=EIF3M PE=1 SV=1
Length = 374
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 13/173 (7%)
Query: 207 LSALLGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRYQELCRVHNAALRA 266
+ AL N + F LL + L G E ++ +L F S L Y + + + + +
Sbjct: 209 VRALKDPNAFLFDHLLTLKPVKFLEG---ELIHDLLTIFVSAKLASYVKFYQNNKDFIDS 265
Query: 267 QPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLSIEDVEHLLMKSLSV 326
L E + K+ +L M + E++ I + + ++ +DVE ++ ++
Sbjct: 266 LGLLHEQN---MAKMRLLTFMGMAV----ENKEISFDTMQQELQIGADDVEAFVIDAVRT 318
Query: 327 HLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSW---LGKVHTALLSI 376
++ IDQ + V VS R G Q + L D L++W L KV +LLS+
Sbjct: 319 KMVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNLNKVKNSLLSL 371
>sp|Q5R8C4|EIF3M_PONAB Eukaryotic translation initiation factor 3 subunit M OS=Pongo
abelii GN=EIF3M PE=2 SV=1
Length = 374
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 13/173 (7%)
Query: 207 LSALLGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRYQELCRVHNAALRA 266
+ AL N + F LL + L G E ++ +L F S L Y + + + + +
Sbjct: 209 VRALKDPNAFLFDHLLTLKPVKFLEG---ELIHDLLTIFVSAKLASYVKFYQNNKDFIDS 265
Query: 267 QPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLSIEDVEHLLMKSLSV 326
L E + K+ +L M + E++ I + + ++ +DVE ++ ++
Sbjct: 266 LGLLHEQN---MAKMRLLTFMGMAV----ENKEISFDTMQQELQIGADDVEAFVIDAVRT 318
Query: 327 HLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSW---LGKVHTALLSI 376
++ IDQ + V VS R G Q + L D L++W L KV +LLS+
Sbjct: 319 KMVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNLNKVKNSLLSL 371
>sp|Q5DHT6|EIF3M_SCHJA Eukaryotic translation initiation factor 3 subunit M OS=Schistosoma
japonicum GN=SJCHGC06559 PE=2 SV=1
Length = 384
Score = 41.2 bits (95), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 16/197 (8%)
Query: 181 ALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIINSLTGTKVEWLYY 240
A++YL T E + + + + A +S L + + +L A + L G V +
Sbjct: 191 AMIYLLSTYNEVTAVNARQN-AIKCIISVLQDPCLLSHDQLYALKPVQYLEGEPVHDFFK 249
Query: 241 ILQAFNSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINILCLMEIIFSRPSED-RT 299
I F SGDL ++ H L +E+ + K+ +L LM++ SE+
Sbjct: 250 I---FVSGDLNTFKNFLAKHPNFLSHNNL---SEEACVHKLRLLTLMQL-----SENVNE 298
Query: 300 IPLSIIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLR 359
+ A + L IE++E +++++ + +DQV+ + ++ PR G PQ +L
Sbjct: 299 LSYHEAATQLGLKIEELEPFIIEAVRQRAVACKLDQVQKKILITGAFPRTFGRPQWINLH 358
Query: 360 DRLDSW---LGKVHTAL 373
D L W LG V ++L
Sbjct: 359 DTLVQWRSHLGTVQSSL 375
>sp|O01422|CSN2_CAEEL COP9 signalosome complex subunit 2 OS=Caenorhabditis elegans
GN=csn-2 PE=1 SV=2
Length = 495
Score = 41.2 bits (95), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 73/141 (51%), Gaps = 7/141 (4%)
Query: 210 LLGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRYQELCRVHNAALRAQPA 269
L+ +I F A P N ++ + ++QA+ D+ ++++ H ++ A P
Sbjct: 286 LIKSDINPFDSQEAKPFKNE---PEIVAMTQMVQAYQDNDIQAFEQIMAAHQDSIMADPF 342
Query: 270 LVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLSIEDVEHLLMKSLSVHLI 329
+ E+ ++L+ I L+ +I RP + + +S ++++ K+S ++V HLL+ ++ +
Sbjct: 343 IREHTEELMNNIRTQVLLRLI--RPYTN--VRISYLSQKLKVSQKEVIHLLVDAILDDGL 398
Query: 330 EGIIDQVEGTVHVSWVQPRVL 350
E I++ G + + + +++
Sbjct: 399 EAKINEESGMIEMPKNKKKMM 419
>sp|Q2HE94|EIF3M_CHAGB Eukaryotic translation initiation factor 3 subunit M OS=Chaetomium
globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 /
NBRC 6347 / NRRL 1970) GN=CHGG_01460 PE=3 SV=2
Length = 426
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 6/150 (4%)
Query: 216 YNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRYQELCRVHNAALRAQPALVENEK 275
++F +L P + +L G +L F DL Y + H + + ++NEK
Sbjct: 225 FDFQDLRILPSVQAL-GDSHPVYSQLLDIFIEQDLEDYNDFKDEHEGWVEKEK--LDNEK 281
Query: 276 KLLEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQ 335
L K+ +L + S P +R IP + IA+ ++ E+VE + + L+EG + Q
Sbjct: 282 -LQRKMRLLTFASLAASTP--NREIPYANIAKALQIPSEEVEMWTIDVVRAKLVEGRLSQ 338
Query: 336 VEGTVHVSWVQPRVLGIPQIKSLRDRLDSW 365
+ V RV G Q + L R+D +
Sbjct: 339 QQKVFLVHRTTYRVFGEKQWRELATRVDQY 368
>sp|Q3T148|EIF3M_BOVIN Eukaryotic translation initiation factor 3 subunit M OS=Bos taurus
GN=EIF3M PE=2 SV=2
Length = 373
Score = 40.4 bits (93), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 296 EDRTIPLSIIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQI 355
E++ I + + ++ +DVE ++ ++ ++ IDQ + V VS R G Q
Sbjct: 287 ENKEISFDTMQQELQIGADDVEAFVIDAVRTKMVYCKIDQTQRKVVVSHSTHRTFGKQQW 346
Query: 356 KSLRDRLDSW---LGKVHTALLSI 376
+ L D L++W L KV +LLS+
Sbjct: 347 QQLYDTLNAWKQNLNKVKNSLLSL 370
>sp|Q6IQT4|CSN2_DANRE COP9 signalosome complex subunit 2 OS=Danio rerio GN=cops2 PE=2
SV=1
Length = 443
Score = 39.7 bits (91), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 80/172 (46%), Gaps = 15/172 (8%)
Query: 165 SQYHKFHQEFAEFYKCALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAH 224
++ K H +F E +K ES S L + + + L+ I F A
Sbjct: 249 GEFEKAHTDFFEAFK--------NYDESGSPRRTTCLKYLVLANMLMKSGINPFDSQEAK 300
Query: 225 PIINSLTGTKVEWLYYILQAFNSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINIL 284
P N ++ + ++ A+ + D+ ++++ + +++ + P + E+ ++LL I
Sbjct: 301 PYKND---PEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDDPFIREHIEELLRNIRTQ 357
Query: 285 CLMEIIFSRPSEDRTIPLSIIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQV 336
L+++I +P IP I++ + + DVE LL++ + + I G IDQV
Sbjct: 358 VLIKLI--KPYTRIHIPF--ISKELNIDVADVESLLVQCILDNTINGRIDQV 405
>sp|Q9UUJ7|CSN7_SCHPO COP9 signalosome complex subunit 7 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=csn71 PE=1 SV=1
Length = 205
Score = 39.7 bits (91), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 316 VEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDSWLGKVHTALLS 375
VE+ +M+++ ++ G I+ T+HVSW R L +I ++ LD ++ + L
Sbjct: 104 VEYYIMQAMMNQILVGKINAKTQTLHVSWALERFLDSKRIDEMKYSLDRFIERCSNILFQ 163
Query: 376 IEAETPDLVAS 386
++A TP + S
Sbjct: 164 LDAGTPSVSKS 174
>sp|Q6IR75|CSN2_XENLA COP9 signalosome complex subunit 2 (Fragment) OS=Xenopus laevis
GN=csn2 PE=2 SV=1
Length = 441
Score = 39.7 bits (91), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 80/172 (46%), Gaps = 15/172 (8%)
Query: 165 SQYHKFHQEFAEFYKCALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAH 224
++ K H +F E +K ES S L + + + L+ I F A
Sbjct: 247 GEFEKAHTDFFEAFK--------NYDESGSPRRTTCLKYLVLANMLMKSGINPFDSQEAK 298
Query: 225 PIINSLTGTKVEWLYYILQAFNSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINIL 284
P N ++ + ++ A+ + D+ ++++ + +++ + P + E+ ++LL I
Sbjct: 299 PYKND---PEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDDPFIREHIEELLRNIRTQ 355
Query: 285 CLMEIIFSRPSEDRTIPLSIIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQV 336
L+++I +P IP I++ + + DVE LL++ + + I G IDQV
Sbjct: 356 VLIKLI--KPYTRIHIPF--ISKELNIDVADVESLLVQCILDNTIHGRIDQV 403
>sp|Q6DK91|EIF3M_XENTR Eukaryotic translation initiation factor 3 subunit M OS=Xenopus
tropicalis GN=eif3m PE=2 SV=1
Length = 374
Score = 39.7 bits (91), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
Query: 278 LEKINILCLMEIIFSRPSEDRTIPLSIIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVE 337
+EK+ +L M + +++ I I + ++ ++VE ++ ++ ++ IDQ +
Sbjct: 274 MEKMRLLTFMGMAV----DNKEISFDTIQQELQIGADEVEAFIIDAVKTKMVYCKIDQTQ 329
Query: 338 GTVHVSWVQPRVLGIPQIKSLRDRLDSW---LGKVHTALLSI 376
V VS R G Q + L D L++W L KV +L SI
Sbjct: 330 KRVVVSHSTHRTFGKQQWQQLYDTLNTWKQNLNKVKNSLYSI 371
>sp|P61203|CSN2_RAT COP9 signalosome complex subunit 2 OS=Rattus norvegicus GN=Cops2
PE=2 SV=1
Length = 443
Score = 39.7 bits (91), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 80/172 (46%), Gaps = 15/172 (8%)
Query: 165 SQYHKFHQEFAEFYKCALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAH 224
++ K H +F E +K ES S L + + + L+ I F A
Sbjct: 249 GEFEKAHTDFFEAFK--------NYDESGSPRRTTCLKYLVLANMLMKSGINPFDSQEAK 300
Query: 225 PIINSLTGTKVEWLYYILQAFNSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINIL 284
P N ++ + ++ A+ + D+ ++++ + +++ + P + E+ ++LL I
Sbjct: 301 PYKND---PEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDDPFIREHIEELLRNIRTQ 357
Query: 285 CLMEIIFSRPSEDRTIPLSIIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQV 336
L+++I +P IP I++ + + DVE LL++ + + I G IDQV
Sbjct: 358 VLIKLI--KPYTRIHIPF--ISKELNIDVADVESLLVQCILDNTIHGRIDQV 405
>sp|P61202|CSN2_MOUSE COP9 signalosome complex subunit 2 OS=Mus musculus GN=Cops2 PE=1
SV=1
Length = 443
Score = 39.7 bits (91), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 80/172 (46%), Gaps = 15/172 (8%)
Query: 165 SQYHKFHQEFAEFYKCALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAH 224
++ K H +F E +K ES S L + + + L+ I F A
Sbjct: 249 GEFEKAHTDFFEAFK--------NYDESGSPRRTTCLKYLVLANMLMKSGINPFDSQEAK 300
Query: 225 PIINSLTGTKVEWLYYILQAFNSGDLVRYQELCRVHNAALRAQPALVENEKKLLEKINIL 284
P N ++ + ++ A+ + D+ ++++ + +++ + P + E+ ++LL I
Sbjct: 301 PYKND---PEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDDPFIREHIEELLRNIRTQ 357
Query: 285 CLMEIIFSRPSEDRTIPLSIIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQV 336
L+++I +P IP I++ + + DVE LL++ + + I G IDQV
Sbjct: 358 VLIKLI--KPYTRIHIPF--ISKELNIDVADVESLLVQCILDNTIHGRIDQV 405
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 138,515,372
Number of Sequences: 539616
Number of extensions: 5520234
Number of successful extensions: 15345
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 15261
Number of HSP's gapped (non-prelim): 92
length of query: 386
length of database: 191,569,459
effective HSP length: 119
effective length of query: 267
effective length of database: 127,355,155
effective search space: 34003826385
effective search space used: 34003826385
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)