BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>043785
MLQLFFTVAFSAVPLTLYIPPLRSLNLFVETMEDFLRESRIYTNRLYPRARFVWSRVLDC
ILCNLRLD

High Scoring Gene Products

Symbol, full name Information P value
AT3G52105 protein from Arabidopsis thaliana 1.9e-19

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  043785
        (68 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:1006230209 - symbol:AT3G52105 "AT3G52105" spec...   232  1.9e-19   1


>TAIR|locus:1006230209 [details] [associations]
            symbol:AT3G52105 "AT3G52105" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0006661 "phosphatidylinositol
            biosynthetic process" evidence=RCA] EMBL:CP002686
            GenomeReviews:BA000014_GR EMBL:AY128305 EMBL:BT000023
            IPI:IPI00535853 RefSeq:NP_974415.1 UniGene:At.48761
            UniGene:At.66551 UniGene:At.70198 EnsemblPlants:AT3G52105.1
            GeneID:2745960 KEGG:ath:AT3G52105 TAIR:At3g52105 eggNOG:NOG329386
            HOGENOM:HOG000029126 InParanoid:Q8L7R6 OMA:LYIPPVR PhylomeDB:Q8L7R6
            ProtClustDB:CLSN2681314 ArrayExpress:Q8L7R6 Genevestigator:Q8L7R6
            Uniprot:Q8L7R6
        Length = 70

 Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
 Identities = 43/66 (65%), Positives = 52/66 (78%)

Query:     1 MLQLFFTVAFSAVPLTLYIPPLRSLNLFVETMEDFLRESRIYTNRLYPRARFVWSRVLDC 60
             MLQLFFT+AFSA PLTLYIPP+R L +FVETME+   E R+Y+ RL+PRAR  WSR+LDC
Sbjct:     1 MLQLFFTIAFSAAPLTLYIPPIRCLTVFVETMEEMGMEGRVYSWRLFPRARIAWSRLLDC 60

Query:    61 ILCNLR 66
                + R
Sbjct:    61 FFSSSR 66


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.336   0.146   0.461    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       68        68   0.00091  102 3  11 21  0.46    27
                                                     29  0.38    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  453 (48 KB)
  Total size of DFA:  86 KB (2067 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.40u 0.10s 8.50t   Elapsed:  00:00:01
  Total cpu time:  8.40u 0.10s 8.50t   Elapsed:  00:00:01
  Start:  Tue May 21 00:36:45 2013   End:  Tue May 21 00:36:46 2013

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