BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043786
(164 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84W65|SUFE_ARATH SufE-like protein, chloroplastic OS=Arabidopsis thaliana GN=EMB1374
PE=1 SV=2
Length = 371
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 79/103 (76%), Positives = 91/103 (88%), Gaps = 3/103 (2%)
Query: 65 GDNGSNSGGLGSRGMRIRDKLEKELRPVVLEVEDISYQHAGHAGVRGS---DGETHFNVK 121
++GSN LGSRGMRIR+KLEKEL PV LEVED+SYQHAGHA VRGS DGETHFN++
Sbjct: 269 SESGSNVVALGSRGMRIREKLEKELDPVELEVEDVSYQHAGHAAVRGSAGDDGETHFNLR 328
Query: 122 IVSKEFEGKSLVKRHRLIYDLLQEELQNGLHALSIVARTPSEV 164
IVS F+GKSLVKRHRLIYDLLQ+EL++GLHALSIVA+TP+EV
Sbjct: 329 IVSDAFQGKSLVKRHRLIYDLLQDELKSGLHALSIVAKTPAEV 371
>sp|Q5RCE5|BOLA1_PONAB BolA-like protein 1 OS=Pongo abelii GN=BOLA1 PE=2 SV=1
Length = 137
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
Query: 56 LEMEGDSGAGDNGSNSGGLGSRGMRIRDKLEKELRPVVLEVEDISYQHAGHAGVRGSDGE 115
+ M G + SG +G IR KLE+ L P VLE+ + + GHA GS E
Sbjct: 11 VSMAGRVCLCQGSAGSGAVGPVEAAIRTKLEQALSPEVLELRN---ESGGHAVPPGS--E 65
Query: 116 THFNVKIVSKEFEGKSLVKRHRLIYDLLQEELQNGLHALSIVARTPSE 163
THF V +VS FEG S ++RHRLI+ L EEL +HAL+I ARTP++
Sbjct: 66 THFRVAVVSSRFEGLSPLQRHRLIHAALAEELAGPVHALAIQARTPAQ 113
>sp|Q9Y3E2|BOLA1_HUMAN BolA-like protein 1 OS=Homo sapiens GN=BOLA1 PE=1 SV=1
Length = 137
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
Query: 56 LEMEGDSGAGDNGSNSGGLGSRGMRIRDKLEKELRPVVLEVEDISYQHAGHAGVRGSDGE 115
+ M G + SG +G IR KLE+ L P VLE+ + + GHA GS E
Sbjct: 11 VSMAGRVCLCQGSAGSGAIGPVEAAIRTKLEEALSPEVLELRN---ESGGHAVPPGS--E 65
Query: 116 THFNVKIVSKEFEGKSLVKRHRLIYDLLQEELQNGLHALSIVARTPSE 163
THF V +VS FEG S ++RHRL++ L EEL +HAL+I ARTP++
Sbjct: 66 THFRVAVVSSRFEGLSPLQRHRLVHAALAEELGGPVHALAIQARTPAQ 113
>sp|Q9D8S9|BOLA1_MOUSE BolA-like protein 1 OS=Mus musculus GN=Bola1 PE=1 SV=1
Length = 137
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 53 NLTLEMEGDSGAGDNGSNSGGLGSRGMRIRDKLEKELRPVVLEVEDISYQHAGHAGVRGS 112
+ M S + S G IR KLE+ L P VLE+ + S HA AG
Sbjct: 8 QCMVSMATRSCVSRGSAGSAAAGPVEAAIRAKLEQALSPEVLELRNESGGHAVPAG---- 63
Query: 113 DGETHFNVKIVSKEFEGKSLVKRHRLIYDLLQEELQNGLHALSIVARTPSE 163
ETHF V +VS FEG S ++RHRL+++ L EEL +HAL+I A+TP++
Sbjct: 64 -SETHFRVAVVSSRFEGMSPLQRHRLVHEALSEELAGPVHALAIQAKTPAQ 113
>sp|Q3T138|BOLA1_BOVIN BolA-like protein 1 OS=Bos taurus GN=BOLA1 PE=2 SV=1
Length = 135
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 59/93 (63%), Gaps = 5/93 (5%)
Query: 71 SGGLGSRGMRIRDKLEKELRPVVLEVEDISYQHAGHAGVRGSDGETHFNVKIVSKEFEGK 130
SG +G IR KLE+ L P VLE+ + + GHA GS ETHF V +VS FEG
Sbjct: 26 SGVIGPVEAAIRTKLEQALNPEVLELRN---ESGGHAVPPGS--ETHFRVAVVSSRFEGL 80
Query: 131 SLVKRHRLIYDLLQEELQNGLHALSIVARTPSE 163
S ++RHRL++ L EEL +HAL+I ARTP++
Sbjct: 81 SPLQRHRLVHAALSEELAGPVHALAIQARTPAQ 113
>sp|Q3E793|YA044_YEAST Uncharacterized bolA-like protein YAL044W-A OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YAL044W-A
PE=1 SV=1
Length = 110
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 51/68 (75%), Gaps = 3/68 (4%)
Query: 100 SYQHAGHAGVRGS-DGETHFNVKIVSKEFEGKSLVKRHRLIYDLLQEEL--QNGLHALSI 156
S++H GHAGV+G+ ETHF +++VSK+FEG L +RHR++Y LLQ+E+ NG+HAL +
Sbjct: 38 SHKHKGHAGVQGNVSAETHFRIEMVSKKFEGLKLPQRHRMVYSLLQDEMAQANGIHALQL 97
Query: 157 VARTPSEV 164
+TP E
Sbjct: 98 SLKTPQEY 105
>sp|Q86KD0|Y7416_DICDI BolA-like protein DDB_G0274169 OS=Dictyostelium discoideum
GN=DDB_G0274169 PE=3 SV=1
Length = 114
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 58/84 (69%), Gaps = 6/84 (7%)
Query: 81 IRDKLEKELRPVVLEVEDISYQHAGHAGVRGSDGETHFNVKIVSKEFEGKSLVKRHRLIY 140
I++ L KEL P+ LE+ + SY H G E+HF VKIVS++FE S++++HRL+
Sbjct: 11 IKELLTKELNPINLEIINESYMHNVPKG-----SESHFKVKIVSEKFETLSMIEQHRLVN 65
Query: 141 DLLQEELQNG-LHALSIVARTPSE 163
++L+ + NG +HALSI +RTP++
Sbjct: 66 EILKNFIGNGKIHALSITSRTPTQ 89
>sp|Q12238|UVI31_SCHPO UV-induced protein uvi31 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=uvi31 PE=2 SV=1
Length = 102
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Query: 77 RGMRIRDKLEKELRPVVLEVEDISYQHAGHAGVRG--SDGETHFNVKIVSKEFEGKSLVK 134
R RI L + L+ + + + SY+H+ H ++G ETHF ++IVS EF G S V
Sbjct: 11 RQDRIYKTLSEALKTDKITLYNDSYKHSHHIAMKGVPDTNETHFRLEIVSPEFSGMSRVA 70
Query: 135 RHRLIYDLLQEELQNGLHALSIV-ARTPSEV 164
RHRL+Y LL++E GLHAL I ++TP EV
Sbjct: 71 RHRLVYGLLKDEFDGGLHALQITSSKTPDEV 101
>sp|P0ABE4|BOLA_SHIFL Protein BolA OS=Shigella flexneri GN=bolA PE=3 SV=1
Length = 105
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 9/89 (10%)
Query: 79 MRIRDKLEKELR----PVVLEVEDISYQHAGHAGVRGSDGETHFNVKIVSKEFEGKSLVK 134
M IR+++E++LR PV LEV D SY+H AG E+HF V +VS F G+ +
Sbjct: 1 MMIRERIEEKLRAAFQPVFLEVVDESYRHNVPAG-----SESHFKVVLVSDRFTGERFLN 55
Query: 135 RHRLIYDLLQEELQNGLHALSIVARTPSE 163
RHR+IY L EEL +HAL++ T E
Sbjct: 56 RHRMIYSTLAEELSTTVHALALHTYTIKE 84
>sp|P0ABE2|BOLA_ECOLI Protein BolA OS=Escherichia coli (strain K12) GN=bolA PE=1 SV=1
Length = 105
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 9/89 (10%)
Query: 79 MRIRDKLEKELR----PVVLEVEDISYQHAGHAGVRGSDGETHFNVKIVSKEFEGKSLVK 134
M IR+++E++LR PV LEV D SY+H AG E+HF V +VS F G+ +
Sbjct: 1 MMIRERIEEKLRAAFQPVFLEVVDESYRHNVPAG-----SESHFKVVLVSDRFTGERFLN 55
Query: 135 RHRLIYDLLQEELQNGLHALSIVARTPSE 163
RHR+IY L EEL +HAL++ T E
Sbjct: 56 RHRMIYSTLAEELSTTVHALALHTYTIKE 84
>sp|P0ABE3|BOLA_ECOL6 Protein BolA OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928
/ UPEC) GN=bolA PE=3 SV=1
Length = 105
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 9/89 (10%)
Query: 79 MRIRDKLEKELR----PVVLEVEDISYQHAGHAGVRGSDGETHFNVKIVSKEFEGKSLVK 134
M IR+++E++LR PV LEV D SY+H AG E+HF V +VS F G+ +
Sbjct: 1 MMIRERIEEKLRAAFQPVFLEVVDESYRHNVPAG-----SESHFKVVLVSDRFTGERFLN 55
Query: 135 RHRLIYDLLQEELQNGLHALSIVARTPSE 163
RHR+IY L EEL +HAL++ T E
Sbjct: 56 RHRMIYSTLAEELSTTVHALALHTYTIKE 84
>sp|P29943|YCB1_PSEDE Uncharacterized protein in cobS 5'region OS=Pseudomonas
denitrificans PE=3 SV=1
Length = 93
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 47/83 (56%)
Query: 81 IRDKLEKELRPVVLEVEDISYQHAGHAGVRGSDGETHFNVKIVSKEFEGKSLVKRHRLIY 140
I KL + P LEV + S+QH GH GE+H V+IVS F G S V RHR I
Sbjct: 7 IEKKLIEAFHPERLEVINESHQHTGHQPGFDGTGESHMRVRIVSSAFAGMSRVARHRAIN 66
Query: 141 DLLQEELQNGLHALSIVARTPSE 163
DLL+ EL GLHAL++ P E
Sbjct: 67 DLLKPELDAGLHALAVEPAAPGE 89
>sp|Q56585|BOLA_VIBAL Protein BolA homolog OS=Vibrio alginolyticus GN=bolA PE=3 SV=1
Length = 102
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 81 IRDKLEKELRPVVLEVEDISYQHAGHAGVRGSDGETHFNVKIVSKEFEGKSLVKRHRLIY 140
I KL EL+P L+V + SY H G E+HF V +VS F G+ L+ RHR ++
Sbjct: 6 IEKKLHSELQPSYLKVINESYMHNVPPG-----SESHFKVIVVSDSFAGQRLIGRHRQVH 60
Query: 141 DLLQEELQNGLHALSIVARTPSE 163
+L +EL N +HAL+I T E
Sbjct: 61 QILADELDNHIHALAIHTYTDEE 83
>sp|P91375|YN1I_CAEEL Putative bolA-like protein K11H12.1 OS=Caenorhabditis elegans
GN=K11H12.1 PE=3 SV=1
Length = 108
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 46/78 (58%), Gaps = 5/78 (6%)
Query: 81 IRDKLEKELRPVVLEVEDISYQHAGHAGVRGSDGETHFNVKIVSKEFEGKSLVKRHRLIY 140
+++KL +P LEVE S+ H G E HF V++VS EFEGK +++RHRL+
Sbjct: 13 LKEKLFAAFQPKHLEVECESHLHNVPKG-----AEKHFRVQVVSDEFEGKRVIERHRLVN 67
Query: 141 DLLQEELQNGLHALSIVA 158
L +EL +HAL I A
Sbjct: 68 TCLAKELATTVHALRIDA 85
>sp|P43780|BOLA_HAEIN Protein BolA homolog OS=Haemophilus influenzae (strain ATCC 51907 /
DSM 11121 / KW20 / Rd) GN=bolA PE=3 SV=1
Length = 103
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 5/75 (6%)
Query: 89 LRPVVLEVEDISYQHAGHAGVRGSDGETHFNVKIVSKEFEGKSLVKRHRLIYDLLQEELQ 148
+P L +E+ S+ H H+ RGS E+HF IVS +F+ V+RH+ IY LL EEL
Sbjct: 15 FQPHFLAIENESHLH--HSN-RGS--ESHFKCVIVSADFKNIRKVQRHQRIYQLLNEELN 69
Query: 149 NGLHALSIVARTPSE 163
+ +HAL++ TP E
Sbjct: 70 HSIHALALHLFTPEE 84
>sp|Q9KPS0|BOLA_VIBCH Protein BolA OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El
Tor Inaba N16961) GN=bolA PE=3 SV=1
Length = 106
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 81 IRDKLEKELRPVVLEVEDISYQHAGHAGVRGSDGETHFNVKIVSKEFEGKSLVKRHRLIY 140
I KL E +P L+V + S H RGS E+HF V +VS+ F G V RHRL+
Sbjct: 6 IEKKLSDEFQPEFLKVINES---DMHNVPRGS--ESHFKVTVVSERFAGLRPVARHRLVN 60
Query: 141 DLLQEELQNGLHALSIVARTPSE 163
L +EL N +HAL+I T E
Sbjct: 61 QTLADELANHIHALAIHTYTTQE 83
>sp|Q8BGS2|BOLA2_MOUSE BolA-like protein 2 OS=Mus musculus GN=Bola2 PE=1 SV=1
Length = 86
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 11/83 (13%)
Query: 81 IRDKLEKELRPVVLEVEDISYQHAGHAGVRGSDGETHFNVKIVSKEFEGKSLVKRHRLIY 140
+R+KL ++L +EVED + T F V +VS +FEGK L++RHRL+
Sbjct: 8 LREKLRQDLEAEHVEVEDTTLNRCA----------TSFRVLVVSAKFEGKPLLQRHRLVN 57
Query: 141 DLLQEELQNGLHALSIVARTPSE 163
+ L EEL + +HA TP +
Sbjct: 58 ECLAEELPH-IHAFEQKTLTPEQ 79
>sp|P39724|AIM1_YEAST Altered inheritance of mitochondria protein 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=AIM1 PE=1
SV=1
Length = 118
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 12/79 (15%)
Query: 81 IRDKLEKELRPVVLEVEDISYQHAGHAGVRGSDGETHFNVKIVSKEFEGKSLVKRHRLIY 140
I DKL++EL P V +V+D+S G G + F + I SK+F G SL+K+H+L+
Sbjct: 42 ITDKLQQELEPEVCKVQDVS----GGCG-------SMFAINITSKKFNGLSLIKQHQLVN 90
Query: 141 DLLQEELQNGLHALSIVAR 159
+L++++ H L + +
Sbjct: 91 RILRDDISRW-HGLQLTTK 108
>sp|Q9H3K6|BOLA2_HUMAN BolA-like protein 2 OS=Homo sapiens GN=BOLA2 PE=1 SV=1
Length = 86
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 11/83 (13%)
Query: 81 IRDKLEKELRPVVLEVEDISYQHAGHAGVRGSDGETHFNVKIVSKEFEGKSLVKRHRLIY 140
+R+KL+++L +EVED + F V +VS +FEGK L++RHRL+
Sbjct: 8 LREKLQRDLEAEHVEVEDTTLNRCS----------CSFRVLVVSAKFEGKPLLQRHRLVN 57
Query: 141 DLLQEELQNGLHALSIVARTPSE 163
L EEL + +HA TP +
Sbjct: 58 ACLAEELPH-IHAFEQKTLTPDQ 79
>sp|Q9USK1|YJ2B_SCHPO Uncharacterized bolA-like protein C4B3.11c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPCC4B3.11c PE=3 SV=1
Length = 116
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 12/77 (15%)
Query: 80 RIRDKLEKELRPVVLEVEDISYQHAGHAGVRGSDGETHFNVKIVSKEFEGKSLVKRHRLI 139
RI+D L ++L P L V D+S G G + + V I SK F+GK+ + +HRL+
Sbjct: 35 RIKDILTEKLSPSSLRVIDVS----GGCG-------SMYQVAIKSKAFQGKNTLAQHRLV 83
Query: 140 YDLLQEELQNGLHALSI 156
+L+EE++N +H L++
Sbjct: 84 NSILKEEIRN-MHGLNL 99
>sp|O14280|YETB_SCHPO Uncharacterized bolA-like protein C8C9.11 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC8C9.11 PE=3 SV=2
Length = 84
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 12/79 (15%)
Query: 85 LEKELRPVVLEVEDISYQHAGHAGVRGSDGETHFNVKIVSKEFEGKSLVKRHRLIYDLLQ 144
++ L P +E++D+S G G+ F V IVS FEGKS + RHRL+ LQ
Sbjct: 11 IQNTLEPTHIEIQDMS----------GGCGQN-FEVIIVSPLFEGKSTLARHRLVNHKLQ 59
Query: 145 EELQNGLHALSIVARTPSE 163
E +++ +HA + +P++
Sbjct: 60 EVIKD-IHAFTQKCYSPAQ 77
>sp|P57545|Y473_BUCAI Uncharacterized protein BU473 OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain APS) GN=BU473 PE=3 SV=1
Length = 104
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 33/50 (66%)
Query: 114 GETHFNVKIVSKEFEGKSLVKRHRLIYDLLQEELQNGLHALSIVARTPSE 163
G TH + I+S +F ++L+ RHR+I+ +L + ++ +++L++ T +E
Sbjct: 34 GLTHLRIIIISDDFINQTLINRHRIIFSMLSKMIEKKIYSLTLNTYTLNE 83
>sp|P0A9W8|YRBA_SHIFL Uncharacterized protein YrbA OS=Shigella flexneri GN=yrbA PE=3 SV=1
Length = 84
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 116 THFNVKIVSKEFEGKSLVKRHRLIYDLLQEEL-QNGLHALSIVARTPSE 163
+HF V V + F+G S VK+ + +Y L E + N +HA+SI A TP+E
Sbjct: 26 SHFQVIAVGELFDGMSRVKKQQTVYGPLMEYIADNRIHAVSIKAYTPAE 74
>sp|P0A9W6|YRBA_ECOLI Uncharacterized protein YrbA OS=Escherichia coli (strain K12)
GN=yrbA PE=1 SV=1
Length = 84
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 116 THFNVKIVSKEFEGKSLVKRHRLIYDLLQEEL-QNGLHALSIVARTPSE 163
+HF V V + F+G S VK+ + +Y L E + N +HA+SI A TP+E
Sbjct: 26 SHFQVIAVGELFDGMSRVKKQQTVYGPLMEYIADNRIHAVSIKAYTPAE 74
>sp|P0A9W7|YRBA_ECOL6 Uncharacterized protein YrbA OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=yrbA PE=3 SV=1
Length = 84
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 116 THFNVKIVSKEFEGKSLVKRHRLIYDLLQEEL-QNGLHALSIVARTPSE 163
+HF V V + F+G S VK+ + +Y L E + N +HA+SI A TP+E
Sbjct: 26 SHFQVIAVGELFDGMSRVKKQQTVYGPLMEYIADNRIHAVSIKAYTPAE 74
>sp|Q8K992|Y457_BUCAP Uncharacterized protein BUsg_457 OS=Buchnera aphidicola subsp.
Schizaphis graminum (strain Sg) GN=BUsg_457 PE=3 SV=1
Length = 111
Score = 38.9 bits (89), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 80 RIRDKLEKELRPVVLEVEDISYQHAGHAGVRGSDGETHFNVKIVSKEFEGKSLVKRHRLI 139
+I+ LE ++ +++ D + H ++ +H V IVS +F K+L+ RHR+I
Sbjct: 5 KIKKYLEFKINIAFIKIYD---ESKLHNYSTNTNTISHLKVIIVSDDFINKNLIIRHRII 61
Query: 140 YDLLQEELQNGLHALSIVARTPSE 163
+ L+E + ++++++ T +E
Sbjct: 62 FKALKEIEKESIYSITLYTYTLNE 85
>sp|P73055|Y3122_SYNY3 Uncharacterized protein ssr3122 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=ssr3122 PE=3 SV=1
Length = 85
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 117 HFNVKIVSKEFEGKSLVKRHRLIYDLLQEELQN-GLHALSIVARTP 161
H +VS F G+S VK+H+++Y L++ L + +HAL++ TP
Sbjct: 30 HLEAVVVSSAFTGQSRVKQHQMVYGALKDALASEAIHALALKTFTP 75
>sp|Q86HT3|Y4439_DICDI BolA-like protein DDB_G0274439 OS=Dictyostelium discoideum
GN=DDB_G0274439 PE=3 SV=1
Length = 52
Score = 37.0 bits (84), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Query: 118 FNVKIVSKEFEGKSLVKRHRLIYDLLQEELQNGLHALSIVART 160
+ ++IVS EF+GKS++ +HR + +L+ + + LH L++V ++
Sbjct: 9 YKIEIVSPEFKGKSMINQHRKVNQILKSVIPS-LHGLTLVTKS 50
>sp|Q8CEI1|BOLA3_MOUSE BolA-like protein 3 OS=Mus musculus GN=Bola3 PE=2 SV=1
Length = 110
Score = 36.2 bits (82), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 12/76 (15%)
Query: 86 EKELRPVVLEVEDISYQHAGHAGVRGSDGETHFNVKIVSKEFEGKSLVKRHRLIYDLLQE 145
EK R ++V DIS G G + +KI S+EF+ K V++H+++ L+E
Sbjct: 45 EKFPRATAIQVTDIS----GGCG-------AMYEIKIESEEFKEKRTVQQHQMVNQALKE 93
Query: 146 ELQNGLHALSIVARTP 161
E++ G+H L I P
Sbjct: 94 EIK-GMHGLRIFTSVP 108
>sp|Q3SZ84|BOLA3_BOVIN BolA-like protein 3 OS=Bos taurus GN=BOLA3 PE=3 SV=1
Length = 110
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 12/76 (15%)
Query: 86 EKELRPVVLEVEDISYQHAGHAGVRGSDGETHFNVKIVSKEFEGKSLVKRHRLIYDLLQE 145
EK R ++V DIS G G + +KI S+EF+ K V++H+++ L+E
Sbjct: 45 EKFPRATAIKVTDIS----------GGCGAM-YEIKIESEEFKEKRTVQQHQMVNQALKE 93
Query: 146 ELQNGLHALSIVARTP 161
E++ G+H L I P
Sbjct: 94 EIK-GMHGLRIFTSVP 108
>sp|Q9ZCE4|Y812_RICPR Uncharacterized protein RP812 OS=Rickettsia prowazekii (strain
Madrid E) GN=RP812 PE=4 SV=1
Length = 77
Score = 34.7 bits (78), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 95 EVEDISYQHAGHAGVRGSD---GETHFNVKIVSKEFEGKSLVKRHRLIYDLLQEELQNGL 151
E+E I + + ++ +D + H+ ++I +F G SL+ +H+L+ + L E L L
Sbjct: 7 ELEKILKKSFPSSVIKITDLVGDQDHYALEISDAQFNGLSLINQHKLVKNALSEILNKKL 66
Query: 152 HALSI 156
H++SI
Sbjct: 67 HSISI 71
>sp|P53082|FRA2_YEAST Fe repressor of activation 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=FRA2 PE=1 SV=1
Length = 120
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 118 FNVKIVSKEFEGKSLVKRHRLIYDLLQEELQNGLHALSIVARTPSE 163
F++ +VS F+GKS + R R + ++EELQ +HA S T E
Sbjct: 70 FDIVVVSDFFQGKSKLMRSRAVNKAVKEELQE-IHAFSCKCYTEEE 114
>sp|Q53S33|BOLA3_HUMAN BolA-like protein 3 OS=Homo sapiens GN=BOLA3 PE=1 SV=1
Length = 107
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 12/76 (15%)
Query: 86 EKELRPVVLEVEDISYQHAGHAGVRGSDGETHFNVKIVSKEFEGKSLVKRHRLIYDLLQE 145
EK R ++V DIS G G + +KI S+EF+ K V++H+++ L+E
Sbjct: 42 EKFPRATAIKVTDIS----------GGCGAM-YEIKIESEEFKEKRTVQQHQMVNQALKE 90
Query: 146 ELQNGLHALSIVARTP 161
E++ +H L I P
Sbjct: 91 EIKE-MHGLRIFTSVP 105
>sp|B7IUP6|CARB_BACC2 Carbamoyl-phosphate synthase large chain OS=Bacillus cereus (strain
G9842) GN=carB PE=3 SV=1
Length = 1072
Score = 30.4 bits (67), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%)
Query: 51 GKNLTLEMEGDSGAGDNGSNSGGLGSRGMRIRDKLEKELRPVVLEVEDISYQHAGHAGVR 110
GK+LTLE G +G N GS + + DK ++E + +I Y AG
Sbjct: 912 GKDLTLEKALYKGLVASGINIPTHGSVIITVADKDKEEAMEIAKRFHEIGYNLLATAGTA 971
Query: 111 GSDGETHFNVKIVSK 125
S E + V++V+K
Sbjct: 972 QSLAEQNIPVQVVNK 986
>sp|Q636E0|CARB_BACCZ Carbamoyl-phosphate synthase large chain OS=Bacillus cereus (strain
ZK / E33L) GN=carB PE=3 SV=1
Length = 1072
Score = 30.4 bits (67), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%)
Query: 51 GKNLTLEMEGDSGAGDNGSNSGGLGSRGMRIRDKLEKELRPVVLEVEDISYQHAGHAGVR 110
GK+LTLE G +G N GS + + DK ++E + +I Y AG
Sbjct: 912 GKDLTLEKALYKGLVASGINIPTHGSVIITVADKDKEEAMEIAKRFHEIGYNLLATAGTA 971
Query: 111 GSDGETHFNVKIVSK 125
S E + V++V+K
Sbjct: 972 QSLAEQNIPVQVVNK 986
>sp|B9IVW3|CARB_BACCQ Carbamoyl-phosphate synthase large chain OS=Bacillus cereus (strain
Q1) GN=carB PE=3 SV=1
Length = 1072
Score = 30.4 bits (67), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%)
Query: 51 GKNLTLEMEGDSGAGDNGSNSGGLGSRGMRIRDKLEKELRPVVLEVEDISYQHAGHAGVR 110
GK+LTLE G +G N GS + + DK ++E + +I Y AG
Sbjct: 912 GKDLTLEKALYKGLVASGINIPTHGSVIITVADKDKEEAMEIAKRFHEIGYNLLATAGTA 971
Query: 111 GSDGETHFNVKIVSK 125
S E + V++V+K
Sbjct: 972 QSLAEQNIPVQVVNK 986
>sp|B7HLM0|CARB_BACC7 Carbamoyl-phosphate synthase large chain OS=Bacillus cereus (strain
AH187) GN=carB PE=3 SV=1
Length = 1072
Score = 30.4 bits (67), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%)
Query: 51 GKNLTLEMEGDSGAGDNGSNSGGLGSRGMRIRDKLEKELRPVVLEVEDISYQHAGHAGVR 110
GK+LTLE G +G N GS + + DK ++E + +I Y AG
Sbjct: 912 GKDLTLEKALYKGLVASGINIPTHGSVIITVADKDKEEAMEIAKRFHEIGYNLLATAGTA 971
Query: 111 GSDGETHFNVKIVSK 125
S E + V++V+K
Sbjct: 972 QSLAEQNIPVQVVNK 986
>sp|C1EPQ0|CARB_BACC3 Carbamoyl-phosphate synthase large chain OS=Bacillus cereus (strain
03BB102) GN=carB PE=3 SV=1
Length = 1072
Score = 30.4 bits (67), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%)
Query: 51 GKNLTLEMEGDSGAGDNGSNSGGLGSRGMRIRDKLEKELRPVVLEVEDISYQHAGHAGVR 110
GK+LTLE G +G N GS + + DK ++E + +I Y AG
Sbjct: 912 GKDLTLEKALYKGLVASGINIPTHGSVIITVADKDKEEAMEIAKRFHEIGYNLLATAGTA 971
Query: 111 GSDGETHFNVKIVSK 125
S E + V++V+K
Sbjct: 972 QSLAEQNIPVQVVNK 986
>sp|A0RHQ8|CARB_BACAH Carbamoyl-phosphate synthase large chain OS=Bacillus thuringiensis
(strain Al Hakam) GN=carB PE=3 SV=1
Length = 1072
Score = 30.4 bits (67), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%)
Query: 51 GKNLTLEMEGDSGAGDNGSNSGGLGSRGMRIRDKLEKELRPVVLEVEDISYQHAGHAGVR 110
GK+LTLE G +G N GS + + DK ++E + +I Y AG
Sbjct: 912 GKDLTLEKALYKGLVASGINIPTHGSVIITVADKDKEEAMEIAKRFHEIGYNLLATAGTA 971
Query: 111 GSDGETHFNVKIVSK 125
S E + V++V+K
Sbjct: 972 QSLAEQNIPVQVVNK 986
>sp|P45026|Y1082_HAEIN Uncharacterized protein HI_1082 OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_1082 PE=1 SV=1
Length = 85
Score = 30.4 bits (67), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 107 AGVRGSDGETHFNVKIVSKEFEGKSLVKRHRLIYDLLQEELQNG-LHALSIVART 160
A V HF V +VS E S VK+ + IY L G +HAL+I T
Sbjct: 17 AEVYAQGENAHFGVIVVSDEIAALSRVKQQQTIYAPLMPYFSTGEIHALTIKTYT 71
>sp|A5H447|ZYX_XENLA Zyxin OS=Xenopus laevis GN=zyx PE=1 SV=1
Length = 663
Score = 30.0 bits (66), Expect = 7.7, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 52/120 (43%), Gaps = 4/120 (3%)
Query: 9 AGGSVEGSNLGSKNSKNLTLERKGDGVGGLESKVESSSQVGSGKNLTLEMEGDSGAGDNG 68
+GG G + + + LE+ + G E + E + +V + +L + +SG
Sbjct: 330 SGGRAPGFSFAQQRERPRVLEKPRANLQGSEPEHEPTVEVQVERTRSLGPQTESGRSPGA 389
Query: 69 SNSGGLGSRGMRIRDKLEKELRPVVLEVEDISYQHAGHAGVRGSDGETHFNVKIVSKEFE 128
++GG + M+ + + +P+ + QH+GH V G +T + + KE E
Sbjct: 390 QSTGG---KDMKPLPEGLRSQKPMSDGIHRTGGQHSGHK-VTGQQDQTLGSQGLNMKEVE 445
>sp|Q09FY8|YCF1_PLAOC Putative membrane protein ycf1 OS=Platanus occidentalis GN=ycf1 PE=3
SV=1
Length = 1915
Score = 29.6 bits (65), Expect = 8.4, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 27/69 (39%), Gaps = 10/69 (14%)
Query: 14 EGSNLGSKNSKNLTLERKGDGVGGLE------SKVESSSQVGSGKNLTLEMEGDSGAGDN 67
E N+ K KNL L + LE + ESSSQ G N + G N
Sbjct: 1565 ENKNINRKQKKNLPLSSNKNKKKSLELENRNQEEKESSSQGDLGSN----AQNQGNLGPN 1620
Query: 68 GSNSGGLGS 76
N G LGS
Sbjct: 1621 AQNQGNLGS 1629
>sp|B7JJX3|CARB_BACC0 Carbamoyl-phosphate synthase large chain OS=Bacillus cereus (strain
AH820) GN=carB PE=3 SV=1
Length = 1072
Score = 29.6 bits (65), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%)
Query: 51 GKNLTLEMEGDSGAGDNGSNSGGLGSRGMRIRDKLEKELRPVVLEVEDISYQHAGHAGVR 110
GK+LTLE G +G N GS + + DK ++E + +I Y AG
Sbjct: 912 GKDLTLEKALYKGLVASGINIPTHGSVIITVADKDKEEAMEIAKRFHEIGYNLLATAGTA 971
Query: 111 GSDGETHFNVKIVSK 125
S E + V++V+K
Sbjct: 972 QSLTEQNIPVQVVNK 986
>sp|Q6HES8|CARB_BACHK Carbamoyl-phosphate synthase large chain OS=Bacillus thuringiensis
subsp. konkukian (strain 97-27) GN=carB PE=3 SV=1
Length = 1072
Score = 29.6 bits (65), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%)
Query: 51 GKNLTLEMEGDSGAGDNGSNSGGLGSRGMRIRDKLEKELRPVVLEVEDISYQHAGHAGVR 110
GK+LTLE G +G N GS + + DK ++E + +I Y AG
Sbjct: 912 GKDLTLEKALYKGLVASGINIPTHGSVIITVADKDKEEAMEIAKRFHEIGYNLLATAGTA 971
Query: 111 GSDGETHFNVKIVSK 125
S E + V++V+K
Sbjct: 972 QSLTEQNIPVQVVNK 986
>sp|Q126C9|Y3713_POLSJ UPF0246 protein Bpro_3713 OS=Polaromonas sp. (strain JS666 / ATCC
BAA-500) GN=Bpro_3713 PE=3 SV=1
Length = 258
Score = 29.6 bits (65), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 16 SNLGSKNSKNLTLERKGDGVGGLESKVESSSQVGSGK 52
+KNSK L GD GGL++K S Q+G +
Sbjct: 69 PKFTAKNSKQAVLAFNGDVYGGLDAKTLSEQQLGWAQ 105
>sp|Q732I3|CARB_BACC1 Carbamoyl-phosphate synthase large chain OS=Bacillus cereus (strain
ATCC 10987) GN=carB PE=3 SV=1
Length = 1072
Score = 29.6 bits (65), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%)
Query: 51 GKNLTLEMEGDSGAGDNGSNSGGLGSRGMRIRDKLEKELRPVVLEVEDISYQHAGHAGVR 110
GK+LTLE G +G N GS + + DK ++E + +I Y AG
Sbjct: 912 GKDLTLEKALYKGLVASGINIPTHGSVIITVADKDKEEAMEIAKRFHEIGYNLLATAGTA 971
Query: 111 GSDGETHFNVKIVSK 125
S E + V++V+K
Sbjct: 972 QSLTEQNIPVQVVNK 986
>sp|Q81WF2|CARB_BACAN Carbamoyl-phosphate synthase large chain OS=Bacillus anthracis
GN=carB PE=3 SV=1
Length = 1072
Score = 29.6 bits (65), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%)
Query: 51 GKNLTLEMEGDSGAGDNGSNSGGLGSRGMRIRDKLEKELRPVVLEVEDISYQHAGHAGVR 110
GK+LTLE G +G N GS + + DK ++E + +I Y AG
Sbjct: 912 GKDLTLEKALYKGLVASGINIPTHGSVIITVADKDKEEAMEIAKRFHEIGYNLLATAGTA 971
Query: 111 GSDGETHFNVKIVSK 125
S E + V++V+K
Sbjct: 972 QSLTEQNIPVQVVNK 986
>sp|C3L740|CARB_BACAC Carbamoyl-phosphate synthase large chain OS=Bacillus anthracis
(strain CDC 684 / NRRL 3495) GN=carB PE=3 SV=1
Length = 1072
Score = 29.6 bits (65), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%)
Query: 51 GKNLTLEMEGDSGAGDNGSNSGGLGSRGMRIRDKLEKELRPVVLEVEDISYQHAGHAGVR 110
GK+LTLE G +G N GS + + DK ++E + +I Y AG
Sbjct: 912 GKDLTLEKALYKGLVASGINIPTHGSVIITVADKDKEEAMEIAKRFHEIGYNLLATAGTA 971
Query: 111 GSDGETHFNVKIVSK 125
S E + V++V+K
Sbjct: 972 QSLTEQNIPVQVVNK 986
>sp|C3P656|CARB_BACAA Carbamoyl-phosphate synthase large chain OS=Bacillus anthracis
(strain A0248) GN=carB PE=3 SV=1
Length = 1072
Score = 29.6 bits (65), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%)
Query: 51 GKNLTLEMEGDSGAGDNGSNSGGLGSRGMRIRDKLEKELRPVVLEVEDISYQHAGHAGVR 110
GK+LTLE G +G N GS + + DK ++E + +I Y AG
Sbjct: 912 GKDLTLEKALYKGLVASGINIPTHGSVIITVADKDKEEAMEIAKRFHEIGYNLLATAGTA 971
Query: 111 GSDGETHFNVKIVSK 125
S E + V++V+K
Sbjct: 972 QSLTEQNIPVQVVNK 986
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.307 0.130 0.349
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,989,027
Number of Sequences: 539616
Number of extensions: 2816598
Number of successful extensions: 7661
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 101
Number of HSP's that attempted gapping in prelim test: 7182
Number of HSP's gapped (non-prelim): 541
length of query: 164
length of database: 191,569,459
effective HSP length: 108
effective length of query: 56
effective length of database: 133,290,931
effective search space: 7464292136
effective search space used: 7464292136
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 56 (26.2 bits)