Query 043788
Match_columns 387
No_of_seqs 138 out of 425
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 14:15:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043788.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043788hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2g5g_X Putative lipoprotein; c 100.0 3.2E-55 1.1E-59 422.8 16.5 226 115-376 16-251 (268)
2 2qgm_A Succinoglycan biosynthe 99.4 2.6E-13 8.8E-18 138.9 7.9 103 135-249 63-175 (445)
3 3b55_A Succinoglycan biosynthe 98.8 1.1E-08 3.8E-13 104.9 9.9 101 135-247 64-174 (451)
4 2ebf_X Dermonecrotic toxin; pa 96.8 0.005 1.7E-07 64.7 10.4 101 136-247 360-463 (746)
5 2xfr_A Beta-amylase; hydrolase 42.9 15 0.00051 38.3 3.4 23 222-244 65-87 (535)
6 1wdp_A Beta-amylase; (beta/alp 42.8 15 0.00052 38.0 3.4 23 222-244 67-89 (495)
7 1fa2_A Beta-amylase; TIM barre 31.5 20 0.00069 37.1 2.2 23 222-244 68-90 (498)
8 2x41_A Beta-glucosidase; hydro 18.2 1.5E+02 0.005 31.7 5.9 75 137-211 436-528 (721)
9 3mvn_A UDP-N-acetylmuramate:L- 18.2 1.7E+02 0.0058 24.6 5.3 21 336-362 140-160 (163)
10 1vli_A Spore coat polysacchari 17.9 2.9E+02 0.0098 27.5 7.5 104 147-260 28-136 (385)
No 1
>2g5g_X Putative lipoprotein; cofacial heme, tyrosine ligand, dimer, transport protein; HET: HEM; 1.90A {Campylobacter jejuni subsp} SCOP: c.150.1.1
Probab=100.00 E-value=3.2e-55 Score=422.79 Aligned_cols=226 Identities=17% Similarity=0.236 Sum_probs=193.2
Q ss_pred ceeeEEeecccCCcccccCcCHHHHHHHHhcCCEEEEccccCCCCchhHHHHHHHHHHHHhhccccCCCceEEeeccCCC
Q 043788 115 VVVSRIYDATVIGEPLAVGKDKRKVWEKLMNARVVYLGEAEQVPVRDDRELELQIVKNLRKRCVESERTITLALEAFPSD 194 (387)
Q Consensus 115 ~~~~rI~D~~~~G~~is~~~~~~~l~~~La~adVVlLGE~Hdnp~~~hH~lQl~llraL~~r~~e~g~~~aLgLEMF~~d 194 (387)
...|+|||..+ |++++ +++|+++|+++|||||||.|||| +||.+|++||++|+++|.+++++++|+||||+++
T Consensus 16 ~~~~~i~d~~~-g~~~s----~~~l~~~l~~advVllGE~Hdnp--~hh~~Q~~li~~L~~~l~~~~~~~al~lEMf~~~ 88 (268)
T 2g5g_X 16 NKDFYILDTHT-QKKIS----FEDMILELLKADVILLGEKHDEV--KHKISQVMIFNALEGNLSSQNINFDVALEMLAST 88 (268)
T ss_dssp TTTEEEEETTT-TEECC----HHHHHHHHTTCSEEEEEECTTCH--HHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEGG
T ss_pred CcceEEEECCC-CCCCC----HHHHHHHhhcCCEEEECCCCCCH--HHHHHHHHHHHHHHHHHhhcCCCCEEEEECCCcc
Confidence 35699999554 99997 99999999999999999999999 8999999999999977766889999999999999
Q ss_pred CchhhhhhhcC--CCChHHHH---HHhcCCCCCCCcccHHHHHHHHhcCCcEEecCCCHHHHHHHHHhc-----ccCCCH
Q 043788 195 LQDQLNQYTDK--RIDGETLK---SYASHWPPQRWQEYEPLLSYCRDNGVQLLACGTPLKVLRTVQAEG-----IHGLSK 264 (387)
Q Consensus 195 ~Q~~LD~ylaG--~Ide~~Ll---~w~~~W~~~~w~lYrPL~~~Ar~~gipviAlNlPre~vr~V~r~G-----l~sLs~ 264 (387)
+|+.||+|++| +||+++|. .|.++|+ |++|+|||+|||++++||||+|+||+++++|+++| +++|++
T Consensus 89 ~Q~~Ld~y~~g~~~i~e~~l~~~~~W~~~W~---~~~Y~Plv~~A~~~~ipviA~N~pr~~~r~v~~~g~p~~gl~~l~~ 165 (268)
T 2g5g_X 89 EQNHLDKAFKNKKTIKANELTNALNWDKVWK---WKDYEQFVNVVFYSKSKILGANLSRSEITSIYNGAQPLKGYVSTTN 165 (268)
T ss_dssp GHHHHHHHHHTGGGCCTTTHHHHTTCCTTSC---GGGTHHHHHHHHTSSCCEEEEECCHHHHHHHHTTCCCCCCSSSSCH
T ss_pred ccHHHHHHHcCCCCCCHHHHHHHhCCCCCCC---HHHHHHHHHHHHHCCCCEEEeCCCHHHHHHHHhcCCCcccccCCCH
Confidence 99999999998 89999996 5877886 89999999999999999999999999999999985 567889
Q ss_pred HHHhhcCCCCCCcccchhhhhcccccccccccCCCCCCCCcchHHHHhhhhhhHHHHHHHHHHHHhcCCCCeEEEEeCCC
Q 043788 265 ADRKLYAPPAGSGFISGFTSISHRSSVDMNSLTQSVPFGPSSYLSAQARVVEDYAMSQIILKAIMDGGANGMLVVVTGAS 344 (387)
Q Consensus 265 eeR~~l~pp~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~f~~aQAq~l~D~tMAe~I~~al~~~~p~~~vVvIaG~g 344 (387)
++|+++.+. +. ..||. .... .+..+++|+.+| ++||++||++|++ ++++||||+|+|
T Consensus 166 ~~r~~l~~~--------~~----~~H~~-~~~~--~~~~~~~~~~aQ--~lrD~~MA~~i~~------~~~~vv~iaG~g 222 (268)
T 2g5g_X 166 EVKKQLFDI--------IS----LSHKL-NPEE--NKELLDKLVEIQ--QFKDRRMADVLVH------HVNKVLLLAGSY 222 (268)
T ss_dssp HHHHHHHHH--------HH----HHHTC-CTTT--THHHHHHHHHHH--HHHHHHHHHHHHH------CSSEEEEEEEHH
T ss_pred HHHHHHHHH--------HH----hccCC-CCCC--ChHHHHHHHHHH--HHHHHHHHHHHHh------CCCeEEEEeCcc
Confidence 999987431 11 12331 1100 011346899888 9999999999975 346899999999
Q ss_pred ccccCCCCcchhhHHhhhcCCCceEEEEeCCC
Q 043788 345 HVTYGSRGTGLPARISKKLQKKNQVVILLDLK 376 (387)
Q Consensus 345 Hv~~g~r~~GVP~rL~r~~P~~~~~vVll~p~ 376 (387)
|+++| +|||.||+++.|+++++||++...
T Consensus 223 H~~~~---~Gvp~~l~~~~p~~~~~vi~~~~~ 251 (268)
T 2g5g_X 223 HTSKK---IGIPLHIQDFKSSKKIVVVNLSYG 251 (268)
T ss_dssp HHCTT---TSHHHHHHHTTCCSCEEEEEECCS
T ss_pred hhcCC---CcHHHHHHHhCCCCceEEEEccCC
Confidence 99976 999999999999999999988653
No 2
>2qgm_A Succinoglycan biosynthesis protein; Q817Z0, NESG, X-RAY, BCR136, structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus cereus atcc 14579} SCOP: c.150.1.3
Probab=99.40 E-value=2.6e-13 Score=138.92 Aligned_cols=103 Identities=18% Similarity=0.228 Sum_probs=86.8
Q ss_pred CHHHHHHHHhcCCEEEEcc-ccCCCCchhHHHHHHHHHHHHhhccccCCCceEEeeccCCCCchhhhhhhcCCC-ChHHH
Q 043788 135 DKRKVWEKLMNARVVYLGE-AEQVPVRDDRELELQIVKNLRKRCVESERTITLALEAFPSDLQDQLNQYTDKRI-DGETL 212 (387)
Q Consensus 135 ~~~~l~~~La~adVVlLGE-~Hdnp~~~hH~lQl~llraL~~r~~e~g~~~aLgLEMF~~d~Q~~LD~ylaG~I-de~~L 212 (387)
|++.|.+.+.+++||+||| .|++. +.|+++.+|++.|.+++ .--+|+||++- ..|..||+|+.|.. +.+.|
T Consensus 63 dl~~L~~~~~~ariV~lGEatHG~~--e~~~~r~~l~r~Lve~~----gf~~va~E~~~-~~~~~vd~yv~g~~~~~~~~ 135 (445)
T 2qgm_A 63 DLKPLKKMIGNAQYVGLGENTHGSS--EIFTMKFRLVKYLVTEM----GFTNFAMEEDW-GNGLKLNEYIQTGKGNPREF 135 (445)
T ss_dssp GGHHHHHHHTTCSEEEECCSSSCBH--HHHHHHHHHHHHHHHHH----CCCEEEEEEEH-HHHHHHHHHHHHCCSCGGGT
T ss_pred hHHHHHHhhcCCCEEEEcCCCCCch--HHHHHHHHHHHHHHHhc----CCeEEEEecCh-HHHHHHHHHHhcCCCCHHHH
Confidence 6999999999999999999 99987 89999999999999853 35699999987 68899999998764 44555
Q ss_pred HHHhcCCCCCCCcccHHHHHHHHh--------cCCcEEecCCCHH
Q 043788 213 KSYASHWPPQRWQEYEPLLSYCRD--------NGVQLLACGTPLK 249 (387)
Q Consensus 213 l~w~~~W~~~~w~lYrPL~~~Ar~--------~gipviAlNlPre 249 (387)
..| .|. ++.|+++|++.|+ .+++++|+++|.+
T Consensus 136 ~~~--~w~---~~e~~~lv~wlR~~N~~~p~~~~v~f~G~D~p~s 175 (445)
T 2qgm_A 136 LKL--LYP---TDEIIAMIEWMKDYNADPSNKKKIQFIGLDLKAL 175 (445)
T ss_dssp SCT--TSC---BHHHHHHHHHHHHHHHCTTCCSCCEEEEEECSCC
T ss_pred HHH--ccC---cHHHHHHHHHHHHHhhcCCCCCeeEEEEeCCccc
Confidence 442 355 4799999999996 6799999999543
No 3
>3b55_A Succinoglycan biosynthesis protein; Q81BN2, NESG, BCR135, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus cereus atcc 14579} SCOP: c.150.1.3 PDB: 2rad_A
Probab=98.80 E-value=1.1e-08 Score=104.90 Aligned_cols=101 Identities=21% Similarity=0.215 Sum_probs=82.2
Q ss_pred CHHHHHHHHhcCCEEEEcc-ccCCCCchhHHHHHHHHHHHHhhccccCCCceEEeeccCCCCchhhhhhhcCCCChHHHH
Q 043788 135 DKRKVWEKLMNARVVYLGE-AEQVPVRDDRELELQIVKNLRKRCVESERTITLALEAFPSDLQDQLNQYTDKRIDGETLK 213 (387)
Q Consensus 135 ~~~~l~~~La~adVVlLGE-~Hdnp~~~hH~lQl~llraL~~r~~e~g~~~aLgLEMF~~d~Q~~LD~ylaG~Ide~~Ll 213 (387)
|++.|.+.+.+++||+||| .|.+. +-++++.+|++.|.+++ .--+|+||.. ...+..+|+|+.|..++..
T Consensus 64 dl~~L~~~i~~ariV~lGEatHG~~--ef~~~r~~l~r~Lve~~----Gf~~va~E~d-~~~~~~vn~yv~~~~g~~~-- 134 (451)
T 3b55_A 64 DLKPLKNMVGSASIVGLGEATHGAH--EVFTMKHRIVKYLVSEK----GFTNLVLEEG-WDRALELDRYVLTGKGNPS-- 134 (451)
T ss_dssp GGTTHHHHHTTCSEEEEEESCTTBH--HHHHHHHHHHHHHHHHS----CCCEEEEEEE-HHHHHHHHHHHHHSCSCGG--
T ss_pred HHHHHHHhhcCCCEEEEeCCCCCch--HHHHHHHHHHHHHHHhc----CCeEEEEecC-hHHHHHHHHHHhcCCchhh--
Confidence 6889999999999999999 89977 89999999999999852 3469999995 5889999999998766544
Q ss_pred HHhc-CCCCCCCcccHHHHHHHHh--------cCCcEEecCCC
Q 043788 214 SYAS-HWPPQRWQEYEPLLSYCRD--------NGVQLLACGTP 247 (387)
Q Consensus 214 ~w~~-~W~~~~w~lYrPL~~~Ar~--------~gipviAlNlP 247 (387)
.|.. -|.+ +.|+++|++.|+ ..+.++|+.+.
T Consensus 135 ~~~~~~w~n---~e~~~lv~wlR~~N~~~~~~~~v~f~G~D~~ 174 (451)
T 3b55_A 135 QHLTPVFKT---KEMLDLLDWIRQYNANPKHKSKVRVIGMDIQ 174 (451)
T ss_dssp GTSCGGGCB---HHHHHHHHHHHHHHHCTTCSCCCEEEEEECS
T ss_pred hcccccccc---HHHHHHHHHHHHHhhcCCCCCceEEEEeccc
Confidence 2221 2553 699999999995 46789986553
No 4
>2ebf_X Dermonecrotic toxin; pasteurella multocida toxin, trojan horse-like fold; HET: TRE; 1.90A {Pasteurella multocida} SCOP: a.296.1.1 c.150.1.2 d.3.1.17 PDB: 2ec5_A 2ebh_X*
Probab=96.81 E-value=0.005 Score=64.65 Aligned_cols=101 Identities=16% Similarity=0.242 Sum_probs=71.7
Q ss_pred HHHHHHHHhcCCEEEEccccCCCCchhHHHHHHHHHHHHhhccccCCCceEEeeccCCC-CchhhhhhhcCCCChHHHHH
Q 043788 136 KRKVWEKLMNARVVYLGEAEQVPVRDDRELELQIVKNLRKRCVESERTITLALEAFPSD-LQDQLNQYTDKRIDGETLKS 214 (387)
Q Consensus 136 ~~~l~~~La~adVVlLGE~Hdnp~~~hH~lQl~llraL~~r~~e~g~~~aLgLEMF~~d-~Q~~LD~ylaG~Ide~~Ll~ 214 (387)
.+.|-+-+..++=+++||.|. .-++=.+=+..|.+ .|- -.|.||-+..| .|..||+|+.+.--.++|..
T Consensus 360 n~~Le~Lyk~s~GLVIGESHs-----SkRFIIdNM~~Lk~----~GV-tTLYMEHL~SDlhQAdLD~YLqTG~MSk~L~a 429 (746)
T 2ebf_X 360 NERIEKCMNTYRGVAFQNSSK-----SIDFFLNNLTTFID----NGL-TEIAISDLPYDIVQQEISQFLQGSNEWKTLDA 429 (746)
T ss_dssp HHHHHHHHHTTSEEEEESCHH-----HHHHHHHTHHHHHH----TTC-CEEEEEEEEHHHHHHHHHHHHTTCSCCHHHHH
T ss_pred HHHHHHHHhcCCceEEeccch-----hHHHHHHHHHHHHh----CCc-eeehHhhhhhHHHHHHHHHHHhcCCcchHHHH
Confidence 345556688999999999996 23333344455654 233 47999999999 78999999986643346653
Q ss_pred HhcC-C-CCCCCcccHHHHHHHHhcCCcEEecCCC
Q 043788 215 YASH-W-PPQRWQEYEPLLSYCRDNGVQLLACGTP 247 (387)
Q Consensus 215 w~~~-W-~~~~w~lYrPL~~~Ar~~gipviAlNlP 247 (387)
+.+. | +.++ .-++-|++.||++||+|+|+...
T Consensus 430 ~Lktld~Ghl~-~sF~~Li~~AR~nGIRIrAID~a 463 (746)
T 2ebf_X 430 MLFNLDKGDIN-GAFRKLLQSAKDNNIKFRAIGHS 463 (746)
T ss_dssp HHHHHTTTCSS-CHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHhhccccccc-HHHHHHHHHHHHcCceEEEeccc
Confidence 3222 2 2221 26999999999999999999877
No 5
>2xfr_A Beta-amylase; hydrolase, carbohydrate metabolism, glycosyl hydrolase famil starch degradation, germination; 0.97A {Hordeum vulgare} PDB: 2xff_A 2xfy_A* 2xg9_A* 2xgb_A* 2xgi_A* 1b1y_A*
Probab=42.93 E-value=15 Score=38.32 Aligned_cols=23 Identities=26% Similarity=0.619 Sum_probs=21.0
Q ss_pred CCCcccHHHHHHHHhcCCcEEec
Q 043788 222 QRWQEYEPLLSYCRDNGVQLLAC 244 (387)
Q Consensus 222 ~~w~lYrPL~~~Ar~~gipviAl 244 (387)
|+|+.|+.|++.+|+.|+++.+.
T Consensus 65 YdWsgY~~L~~mvr~~GLKlq~v 87 (535)
T 2xfr_A 65 YDWSAYKQLFELVQKAGLKLQAI 87 (535)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEE
T ss_pred cCcHHHHHHHHHHHHcCCeEEEE
Confidence 57999999999999999999764
No 6
>1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A*
Probab=42.76 E-value=15 Score=37.97 Aligned_cols=23 Identities=30% Similarity=0.653 Sum_probs=21.0
Q ss_pred CCCcccHHHHHHHHhcCCcEEec
Q 043788 222 QRWQEYEPLLSYCRDNGVQLLAC 244 (387)
Q Consensus 222 ~~w~lYrPL~~~Ar~~gipviAl 244 (387)
|+|+.|+.|++.+|+.|+++.+.
T Consensus 67 YdWsgY~~l~~mv~~~GLKlq~v 89 (495)
T 1wdp_A 67 YDWRAYRSLLQLVQECGLTLQAI 89 (495)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEE
T ss_pred cCcHHHHHHHHHHHHcCCeEEEE
Confidence 58999999999999999999764
No 7
>1fa2_A Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.30A {Ipomoea batatas} SCOP: c.1.8.1
Probab=31.52 E-value=20 Score=37.08 Aligned_cols=23 Identities=22% Similarity=0.582 Sum_probs=21.0
Q ss_pred CCCcccHHHHHHHHhcCCcEEec
Q 043788 222 QRWQEYEPLLSYCRDNGVQLLAC 244 (387)
Q Consensus 222 ~~w~lYrPL~~~Ar~~gipviAl 244 (387)
|+|+.|+.|++.+|+.|+++.+.
T Consensus 68 YdWsgY~~L~~mv~~~GLKlq~v 90 (498)
T 1fa2_A 68 YDWSAYRELFQLVKKCGLKIQAI 90 (498)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEE
T ss_pred cCcHHHHHHHHHHHHcCCeEEEE
Confidence 57999999999999999999764
No 8
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=18.18 E-value=1.5e+02 Score=31.73 Aligned_cols=75 Identities=13% Similarity=0.174 Sum_probs=43.1
Q ss_pred HHHHHHHhcCCEEEE------ccccCCC----CchhHHHHHHHHHHHHhhccccCCCceEEe------ec--cCCCCchh
Q 043788 137 RKVWEKLMNARVVYL------GEAEQVP----VRDDRELELQIVKNLRKRCVESERTITLAL------EA--FPSDLQDQ 198 (387)
Q Consensus 137 ~~l~~~La~adVVlL------GE~Hdnp----~~~hH~lQl~llraL~~r~~e~g~~~aLgL------EM--F~~d~Q~~ 198 (387)
++.++.+.++|+|++ ||-.|-+ ...-...|.++|+++.+.+.+.+++++|.+ +| +......+
T Consensus 436 ~~a~~~a~~aDvvIv~vg~~~gEg~Dr~~~~~~l~Lp~~q~~LI~~v~~~~~~~~~~vVVVl~~g~P~~l~~~~~~v~Ai 515 (721)
T 2x41_A 436 KEIHKLAKKNDVAVIVISRISGEGYDRKPVKGDFYLSDDETDLIKTVSREFHEQGKKVIVLLNIGSPVEVVSWRDLVDGI 515 (721)
T ss_dssp HHHHHHHHHCSEEEEEEECCCBTTCCCCSSBTTTBCCHHHHHHHHHHHHHHHHTTCCEEEEEECSSCCCCTTTGGGCSEE
T ss_pred HHHHHHHhcCCEEEEEEeccccccccccCCCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCCceEccchhhcCCEE
Confidence 677888889998876 4544433 212345699999999811101456766554 22 11234455
Q ss_pred hhhhhcCCCChHH
Q 043788 199 LNQYTDKRIDGET 211 (387)
Q Consensus 199 LD~ylaG~Ide~~ 211 (387)
|..|..|.-....
T Consensus 516 L~a~~pG~egg~A 528 (721)
T 2x41_A 516 LLVWQAGQETGRI 528 (721)
T ss_dssp EECCCCGGGHHHH
T ss_pred EEcCCCchhHHHH
Confidence 5566666554443
No 9
>3mvn_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl-M diaminopimelate ligase; structural genomics, MCSG, PSI-2; 1.90A {Haemophilus ducreyi}
Probab=18.16 E-value=1.7e+02 Score=24.64 Aligned_cols=21 Identities=5% Similarity=0.199 Sum_probs=16.4
Q ss_pred eEEEEeCCCccccCCCCcchhhHHhhh
Q 043788 336 MLVVVTGASHVTYGSRGTGLPARISKK 362 (387)
Q Consensus 336 ~vVvIaG~gHv~~g~r~~GVP~rL~r~ 362 (387)
-+|+|.|+|++. ++...|...
T Consensus 140 DvVLv~Gsg~~~------~~~~~l~~~ 160 (163)
T 3mvn_A 140 DHILIMSNGAFG------GIHQKLLTA 160 (163)
T ss_dssp CEEEEECSSCGG------GHHHHHHHH
T ss_pred CEEEEECCCCHH------HHHHHHHHH
Confidence 499999999966 777777554
No 10
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=17.88 E-value=2.9e+02 Score=27.50 Aligned_cols=104 Identities=16% Similarity=0.215 Sum_probs=61.9
Q ss_pred CEEEEccc---cCCCCchhHHHHHHHHHHHHhhccccCCCceEEeeccCCCC--chhhhhhhcCCCChHHHHHHhcCCCC
Q 043788 147 RVVYLGEA---EQVPVRDDRELELQIVKNLRKRCVESERTITLALEAFPSDL--QDQLNQYTDKRIDGETLKSYASHWPP 221 (387)
Q Consensus 147 dVVlLGE~---Hdnp~~~hH~lQl~llraL~~r~~e~g~~~aLgLEMF~~d~--Q~~LD~ylaG~Ide~~Ll~w~~~W~~ 221 (387)
.+.++.|. |+ ++-..-.+++++..+ .|-. +|=+-.|..+. -+.-..|....-.+..+-+..+.|..
T Consensus 28 ~~~IIAEiG~NH~----Gsle~A~~li~~Ak~----aGAd-avKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l 98 (385)
T 1vli_A 28 PVFIIAEAGINHD----GKLDQAFALIDAAAE----AGAD-AVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEM 98 (385)
T ss_dssp CCEEEEEEETTTT----TCHHHHHHHHHHHHH----HTCS-EEEECCBCGGGGTSCCC---------CCCHHHHGGGBSS
T ss_pred CcEEEEeecCccc----ccHHHHHHHHHHHHH----hCCC-EEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcCC
Confidence 45666666 65 346666677777765 4544 56665555432 11001122110001122233444444
Q ss_pred CCCcccHHHHHHHHhcCCcEEecCCCHHHHHHHHHhccc
Q 043788 222 QRWQEYEPLLSYCRDNGVQLLACGTPLKVLRTVQAEGIH 260 (387)
Q Consensus 222 ~~w~lYrPL~~~Ar~~gipviAlNlPre~vr~V~r~Gl~ 260 (387)
+|+.|+.|+++|++.||+++.-=.+.+-+..+..-|.+
T Consensus 99 -~~e~~~~L~~~~~~~Gi~~~stpfD~~svd~l~~~~vd 136 (385)
T 1vli_A 99 -PAEWILPLLDYCREKQVIFLSTVCDEGSADLLQSTSPS 136 (385)
T ss_dssp -CGGGHHHHHHHHHHTTCEEECBCCSHHHHHHHHTTCCS
T ss_pred -CHHHHHHHHHHHHHcCCcEEEccCCHHHHHHHHhcCCC
Confidence 48899999999999999999999888888887666554
Done!