BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043797
(138 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal
Sensor Domain Of Centrin
Length = 96
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 13/70 (18%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHD 84
IRE F DTD G + E+ ++ L FE P +E+ ++ S + D D
Sbjct: 32 IREAFDLFDTDGSGTIDAKELKVAMRAL-GFE--------PKKEEIKKMISEI----DKD 78
Query: 85 SNGTVDLEEF 94
+GT+D EEF
Sbjct: 79 GSGTIDFEEF 88
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 33.9 bits (76), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 12/81 (14%)
Query: 15 VEDEYAFNILIRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVY 74
++ YAF I D D+DG L+ ++ + + CL T G D + E+ ++
Sbjct: 98 IKSHYAFRIF--------DFDDDGTLNREDLSRLVNCL----TGEGEDTRLSASEMKQLI 145
Query: 75 SSLFVQFDHDSNGTVDLEEFK 95
++ + D D +GT++L EF+
Sbjct: 146 DNILEESDIDRDGTINLSEFQ 166
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 33.9 bits (76), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 12/81 (14%)
Query: 15 VEDEYAFNILIRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVY 74
++ YAF I D D+DG L+ ++ + + CL T G D + E+ ++
Sbjct: 129 IKSHYAFRIF--------DFDDDGTLNREDLSRLVNCL----TGEGEDTRLSASEMKQLI 176
Query: 75 SSLFVQFDHDSNGTVDLEEFK 95
++ + D D +GT++L EF+
Sbjct: 177 DNILEESDIDRDGTINLSEFQ 197
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 33.9 bits (76), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 13/70 (18%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHD 84
IRE F DTD G + E+ ++ L FE P +E+ ++ S + D D
Sbjct: 30 IREAFDLFDTDGSGTIDAKELKVAMRAL-GFE--------PKKEEIKKMISEI----DKD 76
Query: 85 SNGTVDLEEF 94
+GT+D EEF
Sbjct: 77 GSGTIDFEEF 86
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 33.1 bits (74), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 15/74 (20%)
Query: 22 NILIRER-FAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQ 80
+I RER F DT+ DG +S SE+ LK L PDE+ R + +
Sbjct: 9 DIADRERIFKRFDTNGDGKISSSELGDALKTLGSVT----------PDEVRR----MMAE 54
Query: 81 FDHDSNGTVDLEEF 94
D D +G + +EF
Sbjct: 55 IDTDGDGFISFDEF 68
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 33.1 bits (74), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 17/80 (21%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHD 84
IRE F DTD G + E+ ++ L FE P +E+ ++ + + D D
Sbjct: 10 IREAFDLFDTDGSGTIDAKELKVAMRAL-GFE--------PKKEEIKKMIADI----DKD 56
Query: 85 SNGTVDLEEFKAETKQMMLA 104
+GT+D EEF QMM A
Sbjct: 57 GSGTIDFEEF----LQMMTA 72
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 32.3 bits (72), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F D D DG ++ E+ ++ L D+ P +EL + S + D D
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRSL---------DQNPTEEELQDMIS----EVDADG 59
Query: 86 NGTVDLEEF 94
NGT++ +EF
Sbjct: 60 NGTIEFDEF 68
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 32.3 bits (72), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F D D DG ++ E+ ++ L D+ P +EL + S + D D
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRSL---------DQNPTEEELQDMIS----EVDADG 59
Query: 86 NGTVDLEEF 94
NGT++ +EF
Sbjct: 60 NGTIEFDEF 68
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F D D DG ++ E+ ++ L D+ P +EL + S + D D
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRSL---------DQNPTEEELQDMISEV----DADG 59
Query: 86 NGTVDLEEF 94
NGT++ +EF
Sbjct: 60 NGTIEFDEF 68
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 30.8 bits (68), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 52/121 (42%), Gaps = 26/121 (21%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGID--------------------EK 64
I+E F D DNDG +S E+ L+ L T+ ++ K
Sbjct: 7 IQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKEFDLATFKTVYRK 66
Query: 65 P--DPDELARVYSSLFVQFDHDSNGTVDLEEFKAETKQMMLAVANGLGFLPVQMVLEEDS 122
P P E ++ F D + NGT+ +AE +Q++L + + L V+ +++E S
Sbjct: 67 PIKTPTEQSKEMLDAFRALDKEGNGTIQ----EAELRQLLLNLGDALTSSEVEELMKEVS 122
Query: 123 I 123
+
Sbjct: 123 V 123
>pdb|3AKB|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 30.8 bits (68), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 69 ELARVYSSLFVQFDHDSNGTVDLEEFKAETKQMM 102
E R ++ F FD D NG +D +F K M+
Sbjct: 1 EYERRIAARFTTFDQDGNGHIDRSDFSGAAKAML 34
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 30.4 bits (67), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + S + D D
Sbjct: 13 KEAFSLFDKDGDGCITTRELGTVMRSL---------GQNPTEAELRDMMSEI----DRDG 59
Query: 86 NGTVDLEEF 94
NGTVD EF
Sbjct: 60 NGTVDFPEF 68
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 30.4 bits (67), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 13/70 (18%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHD 84
IRE F D D +G +S E+ ++ L P+ EL + L D D
Sbjct: 38 IREAFKVFDRDGNGFISKQELGTAMRSLGYM---------PNEVELEVIIQRL----DMD 84
Query: 85 SNGTVDLEEF 94
+G VD EEF
Sbjct: 85 GDGQVDFEEF 94
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 30.0 bits (66), Expect = 0.45, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 19/77 (24%)
Query: 23 ILIRER----FAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLF 78
+L RER F D+DN G +S +E+ T FG+ D + + S+
Sbjct: 414 LLSRERLERAFRXFDSDNSGKISSTEL----------ATIFGVS-----DVDSETWKSVL 458
Query: 79 VQFDHDSNGTVDLEEFK 95
+ D +++G VD +EF+
Sbjct: 459 SEVDKNNDGEVDFDEFQ 475
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 29.6 bits (65), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E FA D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 13 KEAFALFDKDGDGTITTKELGTVMRSLG---------QNPTEAEL----QDMINEVDADG 59
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 60 NGTIDFPEF 68
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 29.6 bits (65), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E FA D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 13 KEAFALFDKDGDGTITTKELGTVMRSLG---------QNPTEAEL----QDMINEVDADG 59
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 60 NGTIDFPEF 68
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 29.3 bits (64), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 20/75 (26%)
Query: 20 AFNILIRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFV 79
AF+I I++ DG +S E+ K ++ L + P P+EL + +
Sbjct: 23 AFDIFIQDA-------EDGCISTKELGKVMRMLG---------QNPTPEELQEMIDEV-- 64
Query: 80 QFDHDSNGTVDLEEF 94
D D +GTVD +EF
Sbjct: 65 --DEDGSGTVDFDEF 77
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin
C At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 29.3 bits (64), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 20/75 (26%)
Query: 20 AFNILIRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFV 79
AF+I I++ DG +S E+ K ++ L + P P+EL + +
Sbjct: 23 AFDIFIQDA-------EDGCISTKELGKVMRMLG---------QNPTPEELQEMIDEV-- 64
Query: 80 QFDHDSNGTVDLEEF 94
D D +GTVD +EF
Sbjct: 65 --DEDGSGTVDFDEF 77
>pdb|3AKA|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 29.3 bits (64), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 69 ELARVYSSLFVQFDHDSNGTVDLEEFKAETKQMM 102
E R ++ F FD D NG +D +F K ++
Sbjct: 1 EYERRIAARFTTFDQDGNGHIDRSDFSGAAKALL 34
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 29.3 bits (64), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSL---------GQNPTEAEL----QDMINEVDADG 360
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 361 NGTIDFPEF 369
Score = 25.8 bits (55), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 23/83 (27%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFG---IDEKPDPDELARVYSSLFVQF 81
IRE F D D +G +S +E LR T+ G DE + DE+ R +
Sbjct: 386 IREAFRVFDKDGNGYISAAE-------LRHVMTNLGEKLTDE--EVDEMIR-------EA 429
Query: 82 DHDSNGTVDLEEFKAETKQMMLA 104
D D +G V+ EEF QMM A
Sbjct: 430 DIDGDGQVNYEEF----VQMMTA 448
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide:
A New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide:
A New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide:
A New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide:
A New Way Of Making An Old Binding Mode
Length = 179
Score = 29.3 bits (64), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSL---------GQNPTEAEL----QDMINEVDADG 60
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 61 NGTIDFPEF 69
Score = 26.6 bits (57), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 17/80 (21%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHD 84
IRE F D D +G +S +E LR T+ G EK +E+ + + D D
Sbjct: 86 IREAFRVFDKDGNGYISAAE-------LRHVMTNLG--EKLTDEEV----DEMIREADID 132
Query: 85 SNGTVDLEEFKAETKQMMLA 104
+G V+ EEF QMM A
Sbjct: 133 GDGQVNYEEF----VQMMTA 148
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 29.3 bits (64), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 315 KEAFSLFDKDGDGTITTKELGTVMRSL---------GQNPTEAEL----QDMINEVDADG 361
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 362 NGTIDFPEF 370
Score = 25.8 bits (55), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 23/83 (27%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFG---IDEKPDPDELARVYSSLFVQF 81
IRE F D D +G +S +E LR T+ G DE + DE+ R +
Sbjct: 387 IREAFRVFDKDGNGYISAAE-------LRHVMTNLGEKLTDE--EVDEMIR-------EA 430
Query: 82 DHDSNGTVDLEEFKAETKQMMLA 104
D D +G V+ EEF QMM A
Sbjct: 431 DIDGDGQVNYEEF----VQMMTA 449
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 29.3 bits (64), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSL---------GQNPTEAEL----QDMINEVDADG 360
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 361 NGTIDFPEF 369
Score = 25.8 bits (55), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 23/83 (27%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFG---IDEKPDPDELARVYSSLFVQF 81
IRE F D D +G +S +E LR T+ G DE + DE+ R +
Sbjct: 386 IREAFRVFDKDGNGYISAAE-------LRHVMTNLGEKLTDE--EVDEMIR-------EA 429
Query: 82 DHDSNGTVDLEEFKAETKQMMLA 104
D D +G V+ EEF QMM A
Sbjct: 430 DIDGDGQVNYEEF----VQMMTA 448
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 29.3 bits (64), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSL---------GQNPTEAEL----QDMINEVDADG 360
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 361 NGTIDFPEF 369
Score = 25.8 bits (55), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 23/83 (27%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFG---IDEKPDPDELARVYSSLFVQF 81
IRE F D D +G +S +E LR T+ G DE + DE+ R +
Sbjct: 386 IREAFRVFDKDGNGYISAAE-------LRHVMTNLGEKLTDE--EVDEMIR-------EA 429
Query: 82 DHDSNGTVDLEEFKAETKQMMLA 104
D D +G V+ EEF QMM A
Sbjct: 430 DIDGDGQVNYEEF----VQMMTA 448
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 29.3 bits (64), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSL---------GQNPTEAEL----QDMINEVDADG 360
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 361 NGTIDFPEF 369
Score = 25.8 bits (55), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 23/83 (27%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFG---IDEKPDPDELARVYSSLFVQF 81
IRE F D D +G +S +E LR T+ G DE + DE+ R +
Sbjct: 386 IREAFRVFDKDGNGYISAAE-------LRHVMTNLGEKLTDE--EVDEMIR-------EA 429
Query: 82 DHDSNGTVDLEEFKAETKQMMLA 104
D D +G V+ EEF QMM A
Sbjct: 430 DIDGDGQVNYEEF----VQMMTA 448
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 29.3 bits (64), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 8/72 (11%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHD 84
+R F D D DG +S+ E+ + LK + + +L ++ + D D
Sbjct: 78 LRFAFRIYDMDKDGYISNGELFQVLKMM--------VGNNLKDTQLQQIVDKTIINADKD 129
Query: 85 SNGTVDLEEFKA 96
+G + EEF A
Sbjct: 130 GDGRISFEEFCA 141
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 27/73 (36%), Gaps = 27/73 (36%)
Query: 27 ERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQ-----F 81
+RF LD DN G LS E M L + + VQ F
Sbjct: 11 KRFKKLDLDNSGSLSVEEFM----------------------SLPELQQNPLVQRVIDIF 48
Query: 82 DHDSNGTVDLEEF 94
D D NG VD +EF
Sbjct: 49 DTDGNGEVDFKEF 61
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A
Binding Motif (Nscate) Peptide From The N-Terminal
Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium
Channel Alpha1c Subunit
Length = 77
Score = 28.9 bits (63), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSL---------GQNPTEAEL----QDMINEVDADG 59
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 60 NGTIDFPEF 68
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal
Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
N-Terminal Domain
Length = 76
Score = 28.9 bits (63), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLG---------QNPTEAEL----QDMINEVDADG 59
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 60 NGTIDFPEF 68
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 28.9 bits (63), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 8/72 (11%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHD 84
+R F D D DG +S+ E+ + LK + + +L ++ + D D
Sbjct: 77 LRFAFRIYDMDKDGYISNGELFQVLKMM--------VGNNLKDTQLQQIVDKTIINADKD 128
Query: 85 SNGTVDLEEFKA 96
+G + EEF A
Sbjct: 129 GDGRISFEEFCA 140
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 27/73 (36%), Gaps = 27/73 (36%)
Query: 27 ERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQ-----F 81
+RF LD DN G LS E M L + + VQ F
Sbjct: 10 KRFKKLDLDNSGSLSVEEFM----------------------SLPELQQNPLVQRVIDIF 47
Query: 82 DHDSNGTVDLEEF 94
D D NG VD +EF
Sbjct: 48 DTDGNGEVDFKEF 60
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 28.9 bits (63), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 29 FAHLDTDNDGLLSHSEMMKELKCL-RVFETHFGIDEKPDPDELARVYSSLFVQFDHDSNG 87
F D DN+GL+S+ EM++ + + ++ + + E D E RV + +F D + +G
Sbjct: 105 FQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPE-KRV-NKIFNMMDKNKDG 162
Query: 88 TVDLEEFKAETKQ 100
+ LEEF +K+
Sbjct: 163 QLTLEEFCEGSKR 175
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 28.9 bits (63), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLG---------QNPTEAEL----QDMINEVDADG 59
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 60 NGTIDFPEF 68
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin
Amino- Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 28.9 bits (63), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLG---------QNPTEAEL----QDMINEVDADG 60
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 61 NGTIDFPEF 69
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
Length = 79
Score = 28.9 bits (63), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLG---------QNPTEAEL----QDMINEVDADG 59
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 60 NGTIDFPEF 68
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal
Domain
Length = 76
Score = 28.9 bits (63), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLG---------QNPTEAEL----QDMINEVDADG 59
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 60 NGTIDFPEF 68
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 28.9 bits (63), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 8/72 (11%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHD 84
+R F D D DG +S+ E+ + LK + + +L ++ + D D
Sbjct: 92 LRFAFRIYDMDKDGYISNGELFQVLKMM--------VGNNLKDTQLQQIVDKTIINADKD 143
Query: 85 SNGTVDLEEFKA 96
+G + EEF A
Sbjct: 144 GDGRISFEEFCA 155
Score = 27.3 bits (59), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 27/73 (36%), Gaps = 27/73 (36%)
Query: 27 ERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQ-----F 81
+RF LD DN G LS E M L + + VQ F
Sbjct: 25 KRFKKLDLDNSGSLSVEEFM----------------------SLPELQQNPLVQRVIDIF 62
Query: 82 DHDSNGTVDLEEF 94
D D NG VD +EF
Sbjct: 63 DTDGNGEVDFKEF 75
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 28.9 bits (63), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 277 KEAFSLFDKDGDGTITTKELGTVMRSL---------GQNPTEAEL----QDMINEVDADG 323
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 324 NGTIDFPEF 332
Score = 25.4 bits (54), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 23/83 (27%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFG---IDEKPDPDELARVYSSLFVQF 81
IRE F D D +G +S +E LR T+ G DE + DE+ R +
Sbjct: 349 IREAFRVFDKDGNGYISAAE-------LRHVMTNLGEKLTDE--EVDEMIR-------EA 392
Query: 82 DHDSNGTVDLEEFKAETKQMMLA 104
D D +G V+ EEF QMM A
Sbjct: 393 DIDGDGQVNYEEF----VQMMTA 411
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 28.9 bits (63), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 13 KEAFSLYDKDGDGTITTKELGTVMRSLGL---------NPTEAEL----QDMINEVDADG 59
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 60 NGTIDFPEF 68
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 8/72 (11%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHD 84
+R F D D DG +S+ E+ + LK + + +L ++ + D D
Sbjct: 91 LRFAFRIYDMDKDGYISNGELFQVLKMM--------VGNNLKDTQLQQIVDKTIINADKD 142
Query: 85 SNGTVDLEEFKA 96
+G + EEF A
Sbjct: 143 GDGRISFEEFCA 154
Score = 27.3 bits (59), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 27/73 (36%), Gaps = 27/73 (36%)
Query: 27 ERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQ-----F 81
+RF LD DN G LS E M L + + VQ F
Sbjct: 24 KRFKKLDLDNSGSLSVEEFM----------------------SLPELQQNPLVQRVIDIF 61
Query: 82 DHDSNGTVDLEEF 94
D D NG VD +EF
Sbjct: 62 DTDGNGEVDFKEF 74
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In
The Crystal Structure
Length = 142
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 9 KEAFSLFDKDGDGTITTKELGTVMRSL---------GQNPTEAEL----QDMINEVDADG 55
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 56 NGTIDFPEF 64
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 280 KEAFSLFDKDGDGTITTKELGTVMRSL---------GQNPTEAEL----QDMINEVDADG 326
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 327 NGTIDFPEF 335
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
Length = 146
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 11 KEAFSLFDKDGDGTITTKELGTVMRSLG---------QNPTEAEL----QDMINEVDADG 57
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 58 NGTIDFPEF 66
Score = 26.2 bits (56), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 17/80 (21%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHD 84
IRE F D D +G +S +E LR T+ G EK +E+ + + D D
Sbjct: 83 IREAFRVFDKDGNGYISAAE-------LRHVMTNLG--EKLTDEEV----DEMIREADID 129
Query: 85 SNGTVDLEEFKAETKQMMLA 104
+G V+ EEF QMM A
Sbjct: 130 GDGQVNYEEF----VQMMTA 145
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 280 KEAFSLFDKDGDGTITTKELGTVMRSL---------GQNPTEAEL----QDMINEVDADG 326
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 327 NGTIDFPEF 335
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLG---------QNPTEAEL----QDMINEVDADG 60
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 61 NGTIDFPEF 69
Score = 26.2 bits (56), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 17/80 (21%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHD 84
IRE F D D +G +S +E LR T+ G EK +E+ + + D D
Sbjct: 86 IREAFRVFDKDGNGYISAAE-------LRHVMTNLG--EKLTDEEV----DQMIREADID 132
Query: 85 SNGTVDLEEFKAETKQMMLA 104
+G V+ EEF QMM A
Sbjct: 133 GDGQVNYEEF----VQMMTA 148
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSL---------GQNPTEAEL----QDMINEVDADG 59
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 60 NGTIDFPEF 68
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe
Bound With Er Alpha Peptide
Length = 80
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLG---------QNPTEAEL----QDMINEVDADG 59
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 60 NGTIDFPEF 68
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 10 KEAFSLFDKDGDGTITTKELGTVMRSLG---------QNPTEAEL----QDMINEVDADG 56
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 57 NGTIDFPEF 65
Score = 25.8 bits (55), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 17/80 (21%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHD 84
IRE F D D +G +S +E LR T+ G EK +E+ + + D D
Sbjct: 82 IREAFRVFDKDGNGYISAAE-------LRHVMTNLG--EKLTDEEV----DEMIREADID 128
Query: 85 SNGTVDLEEFKAETKQMMLA 104
+G V+ EEF QMM A
Sbjct: 129 GDGQVNYEEF----VQMMTA 144
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLG---------QNPTEAEL----QDMINEVDADG 60
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 61 NGTIDFPEF 69
Score = 26.9 bits (58), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 17/82 (20%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHD 84
IRE F D D +G +S +E LR T+ G EK +E+ + + D D
Sbjct: 86 IREAFRVFDKDGNGYISAAE-------LRHVMTNLG--EKLTDEEV----DEMIREADID 132
Query: 85 SNGTVDLEEFKAETKQMMLAVA 106
+G V+ EEF QMM A A
Sbjct: 133 GDGQVNYEEF----VQMMTAKA 150
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 11 KEAFSLFDKDGDGTITTKELGTVMRSL---------GQNPTEAEL----QDMINEVDADG 57
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 58 NGTIDFPEF 66
Score = 25.8 bits (55), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 17/80 (21%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHD 84
IRE F D D +G +S +E LR T+ G EK +E+ + + D D
Sbjct: 83 IREAFRVFDKDGNGYISAAE-------LRHVMTNLG--EKLTDEEV----DEMIREADID 129
Query: 85 SNGTVDLEEFKAETKQMMLA 104
+G V+ EEF QMM A
Sbjct: 130 GDGQVNYEEF----VQMMTA 145
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLG---------QNPTEAEL----QDMINEVDADG 59
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 60 NGTIDFPEF 68
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLG---------QNPTEAEL----QDMINEVDADG 60
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 61 NGTIDFPEF 69
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLG---------QNPTEAEL----QDMINEVDADG 59
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 60 NGTIDFPEF 68
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLG---------QNPTEAEL----QDMINEVDADG 59
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 60 NGTIDFPEF 68
Score = 25.8 bits (55), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 17/80 (21%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHD 84
IRE F D D +G +S +E LR T+ G EK +E+ + + D D
Sbjct: 85 IREAFRVFDKDGNGYISAAE-------LRHVMTNLG--EKLTDEEV----DEMIREADID 131
Query: 85 SNGTVDLEEFKAETKQMMLA 104
+G V+ EEF QMM A
Sbjct: 132 GDGQVNYEEF----VQMMTA 147
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 9 KEAFSLFDKDGDGTITTKELGTVMRSLG---------QNPTEAEL----QDMINEVDADG 55
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 56 NGTIDFPEF 64
Score = 25.8 bits (55), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 17/80 (21%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHD 84
IRE F D D +G +S +E LR T+ G EK +E+ + + D D
Sbjct: 81 IREAFRVFDKDGNGYISAAE-------LRHVMTNLG--EKLTDEEV----DEMIREADID 127
Query: 85 SNGTVDLEEFKAETKQMMLA 104
+G V+ EEF QMM A
Sbjct: 128 GDGQVNYEEF----VQMMTA 143
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 15 KEAFSLFDKDGDGTITTKELGTVMRSLG---------QNPTEAEL----QDMINEVDADG 61
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 62 NGTIDFPEF 70
Score = 25.8 bits (55), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 17/80 (21%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHD 84
IRE F D D +G +S +E LR T+ G EK +E+ + + D D
Sbjct: 87 IREAFRVFDKDGNGYISAAE-------LRHVMTNLG--EKLTDEEV----DEMIREADID 133
Query: 85 SNGTVDLEEFKAETKQMMLA 104
+G V+ EEF QMM A
Sbjct: 134 GDGQVNYEEF----VQMMTA 149
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLG---------QNPTEAEL----QDMINEVDADG 59
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 60 NGTIDFPEF 68
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLG---------QNPTEAEL----QDMINEVDADG 60
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 61 NGTIDFPEF 69
Score = 25.8 bits (55), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 17/80 (21%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHD 84
IRE F D D +G +S +E LR T+ G EK +E+ + + D D
Sbjct: 86 IREAFRVFDKDGNGYISAAE-------LRHVMTNLG--EKLTDEEV----DEMIREADID 132
Query: 85 SNGTVDLEEFKAETKQMMLA 104
+G V+ EEF QMM A
Sbjct: 133 GDGQVNYEEF----VQMMTA 148
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 19 KEAFSLFDKDGDGTITTKELGTVMRSLG---------QNPTEAEL----QDMINEVDADG 65
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 66 NGTIDFPEF 74
Score = 25.8 bits (55), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 17/80 (21%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHD 84
IRE F D D +G +S +E LR T+ G EK +E+ + + D D
Sbjct: 91 IREAFRVFDKDGNGYISAAE-------LRHVMTNLG--EKLTDEEV----DEMIREADID 137
Query: 85 SNGTVDLEEFKAETKQMMLA 104
+G V+ EEF QMM A
Sbjct: 138 GDGQVNYEEF----VQMMTA 153
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd),
1:2 Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A
Bis-Indol Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled
(Sail) Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From
Dap Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The
Basis Of Diversity In Molecular Recognition, 30
Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA
RECEPTOR NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel
(Cav2.1) Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel
(Cav2.1) Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide
From Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1
In Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE
BINDING MODE
Length = 148
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLG---------QNPTEAEL----QDMINEVDADG 59
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 60 NGTIDFPEF 68
Score = 25.8 bits (55), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 17/80 (21%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHD 84
IRE F D D +G +S +E LR T+ G EK +E+ + + D D
Sbjct: 85 IREAFRVFDKDGNGYISAAE-------LRHVMTNLG--EKLTDEEV----DEMIREADID 131
Query: 85 SNGTVDLEEFKAETKQMMLA 104
+G V+ EEF QMM A
Sbjct: 132 GDGQVNYEEF----VQMMTA 147
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 17 KEAFSLFDKDGDGTITTKELGTVMRSLG---------QNPTEAEL----QDMINEVDADG 63
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 64 NGTIDFPEF 72
Score = 25.8 bits (55), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 17/80 (21%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHD 84
IRE F D D +G +S +E LR T+ G EK +E+ + + D D
Sbjct: 89 IREAFRVFDKDGNGYISAAE-------LRHVMTNLG--EKLTDEEV----DEMIREADID 135
Query: 85 SNGTVDLEEFKAETKQMMLA 104
+G V+ EEF QMM A
Sbjct: 136 GDGQVNYEEF----VQMMTA 151
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE
KINASE Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal
Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal
Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A
Calcineurin Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A
Calcineurin Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium
Channel Splice Variant Complexed With
Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium
Channel Splice Variant Complexed With
Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel
Splice Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel
Splice Variant And Ebio-1
Length = 149
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLG---------QNPTEAEL----QDMINEVDADG 60
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 61 NGTIDFPEF 69
Score = 25.8 bits (55), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 17/80 (21%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHD 84
IRE F D D +G +S +E LR T+ G EK +E+ + + D D
Sbjct: 86 IREAFRVFDKDGNGYISAAE-------LRHVMTNLG--EKLTDEEV----DEMIREADID 132
Query: 85 SNGTVDLEEFKAETKQMMLA 104
+G V+ EEF QMM A
Sbjct: 133 GDGQVNYEEF----VQMMTA 148
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX
COMPLEX
Length = 144
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 11 KEAFSLFDKDGDGTITTKELGTVMRSLG---------QNPTEAEL----QDMINEVDADG 57
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 58 NGTIDFPEF 66
>pdb|1SL8|A Chain A, Calcium-Loaded Apo-Aequorin From Aequorea Victoria
Length = 191
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 70 LARVYS-SLFVQFDHDSNGTVDLEEFKAETK 99
L R++ +LF D D NG + L+E+KA TK
Sbjct: 106 LIRLWGDALFDIIDKDQNGAISLDEWKAYTK 136
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans :
Calmodulin
Length = 149
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLG---------QNPTEAEL----QDMINEVDADG 60
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 61 NGTIDFPEF 69
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 10 KEAFSLFDKDGDGTITTKELGTVMRSLG---------QNPTEAEL----QDMINEVDADG 56
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 57 NGTIDFPEF 65
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide
Complex By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide
Complex By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLG---------QNPTEAEL----QDMINEVDADG 59
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 60 NGTIDFPEF 68
>pdb|1EJ3|A Chain A, Crystal Structure Of Aequorin
pdb|1EJ3|B Chain B, Crystal Structure Of Aequorin
pdb|1UHI|A Chain A, Crystal Structure Of I-aequorin
pdb|1UHI|B Chain B, Crystal Structure Of I-aequorin
pdb|1UHK|A Chain A, Crystal Structure Of N-Aequorin
pdb|1UHK|B Chain B, Crystal Structure Of N-Aequorin
Length = 191
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 70 LARVYS-SLFVQFDHDSNGTVDLEEFKAETK 99
L R++ +LF D D NG + L+E+KA TK
Sbjct: 106 LIRIWGDALFDIVDKDQNGAITLDEWKAYTK 136
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20
Peptide Complex
Length = 148
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLG---------QNPTEAEL----QDMINEVDADG 59
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 60 NGTIDFPEF 68
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor
State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant
Crystal Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1)
Post-rigor State
Length = 149
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLG---------QNPTEAEL----QDMINEVDADG 60
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 61 NGTIDFPEF 69
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLG---------QNPTEAEL----QDMINEVDADG 59
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 60 NGTIDFPEF 68
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSL---------GQNPTEAEL----QDMINEVDADG 59
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 60 NGTIDFPEF 68
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor
State ( Crystal Form 2)
Length = 149
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLG---------QNPTEAEL----QDMINEVDADG 60
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 61 NGTIDFPEF 69
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional
Myosin V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional
Myosin V
Length = 145
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 12 KEAFSLFDKDGDGTITTKELGTVMRSLG---------QNPTEAEL----QDMINEVDADG 58
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 59 NGTIDFPEF 67
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 13 KEAFSLFDKDGDGCITTKELGTVMRSLG---------QNPTEAEL----QDMINEVDADG 59
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 60 NGTIDFPEF 68
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELA-RVYSSLFVQFDH 83
+R F D DNDG ++ +EM+ + +++ E P+ + + +F D
Sbjct: 101 LRWAFKLYDLDNDGYITRNEMLDIVDA--IYQMVGNTVELPEEENTPEKRVDRIFAMMDK 158
Query: 84 DSNGTVDLEEFKAETK 99
+++G + L+EF+ +K
Sbjct: 159 NADGKLTLQEFQEGSK 174
>pdb|1UHH|A Chain A, Crystal Structure Of Cp-Aequorin
pdb|1UHH|B Chain B, Crystal Structure Of Cp-Aequorin
pdb|1UHJ|A Chain A, Crystal Structure Of Br-Aequorin
pdb|1UHJ|B Chain B, Crystal Structure Of Br-Aequorin
Length = 191
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 70 LARVYS-SLFVQFDHDSNGTVDLEEFKAETK 99
L R++ +LF D D NG + L+E+KA TK
Sbjct: 106 LIRIWGDALFDIVDKDQNGAITLDEWKAYTK 136
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 14 KEAFSLFDKDGDGCITTKELGTVMRSLG---------QNPTEAEL----QDMINEVDADG 60
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 61 NGTIDFPEF 69
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 14 KEAFSLFDKDGDGCITTKELGTVMRSLG---------QNPTEAEL----QDMINEVDADG 60
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 61 NGTIDFPEF 69
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 14/66 (21%)
Query: 29 FAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDSNGT 88
F DT+ DG +S SE+ L+ L DE+ R + + D D +G
Sbjct: 8 FKRFDTNGDGKISLSELTDALRTL----------GSTSADEVQR----MMAEIDTDGDGF 53
Query: 89 VDLEEF 94
+D EF
Sbjct: 54 IDFNEF 59
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 13/58 (22%)
Query: 37 DGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDSNGTVDLEEF 94
DG +S E+ K ++ L + P P+EL + + D D +GTVD +EF
Sbjct: 33 DGCISTKELGKVMRMLG---------QNPTPEELQEMIDEV----DEDGSGTVDFDEF 77
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 14/66 (21%)
Query: 29 FAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDSNGT 88
F DT+ DG +S SE+ L+ L DE+ R + + D D +G
Sbjct: 9 FKRFDTNGDGKISLSELTDALRTL----------GSTSADEVQR----MMAEIDTDGDGF 54
Query: 89 VDLEEF 94
+D EF
Sbjct: 55 IDFNEF 60
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac
Troponin-I(147- 163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain
Of Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 13/58 (22%)
Query: 37 DGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDSNGTVDLEEF 94
DG +S E+ K ++ L + P P+EL + + D D +GTVD +EF
Sbjct: 33 DGCISTKELGKVMRMLG---------QNPTPEELQEMIDEV----DEDGSGTVDFDEF 77
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 89
Score = 27.7 bits (60), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 13/58 (22%)
Query: 37 DGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDSNGTVDLEEF 94
DG +S E+ K ++ L + P P+EL + + D D +GTVD +EF
Sbjct: 33 DGSISTKELGKVMRMLG---------QNPTPEELQEMIDEV----DEDGSGTVDFDEF 77
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 27.7 bits (60), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 13/66 (19%)
Query: 29 FAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDSNGT 88
F LD + DG +S+ E+ F ++P +E ++ +F D D NG
Sbjct: 6 FKQLDANGDGSVSYEEV-----------KAFVSSKRPIKNE--QLLQLIFKAIDIDGNGE 52
Query: 89 VDLEEF 94
+DL EF
Sbjct: 53 IDLAEF 58
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 305 KEAFSLFDKDGDGTITTKELGTVMRSL---------GQNPTEAEL----QDMINEVDADG 351
Query: 86 NGTVDLEEF 94
+GT+D EF
Sbjct: 352 DGTIDFPEF 360
Score = 26.6 bits (57), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 23/83 (27%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFG---IDEKPDPDELARVYSSLFVQF 81
IRE F D D +G +S +E LR T+ G DE + DE+ R +
Sbjct: 377 IREAFRVFDKDGNGYISAAE-------LRHVMTNLGEKLTDE--EVDEMIR-------EA 420
Query: 82 DHDSNGTVDLEEFKAETKQMMLA 104
D D +G V+ EEF QMM A
Sbjct: 421 DIDGDGQVNYEEF----VQMMTA 439
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 13/58 (22%)
Query: 37 DGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDSNGTVDLEEF 94
DG +S E+ K ++ L + P P+EL + + D D +GTVD +EF
Sbjct: 33 DGSISTKELGKVMRMLG---------QNPTPEELQEMIDEV----DEDGSGTVDFDEF 77
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 27.3 bits (59), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 13/58 (22%)
Query: 37 DGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDSNGTVDLEEF 94
DG +S E+ K ++ L + P P+EL + + D D +GTVD +EF
Sbjct: 33 DGSISTKELGKVMRMLG---------QNPTPEELQEMIDEV----DEDGSGTVDFDEF 77
>pdb|3B13|A Chain A, Crystal Structure Of The Dhr-2 Domain Of Dock2 In Complex
With Rac1 (T17n Mutant)
pdb|3B13|C Chain C, Crystal Structure Of The Dhr-2 Domain Of Dock2 In Complex
With Rac1 (T17n Mutant)
Length = 431
Score = 27.3 bits (59), Expect = 2.8, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Query: 54 VFETHFGIDEKPDPDELARVYSSLFVQFDHDS----NGTVDLE 92
V + H KP PD++ Y S +VQ H S GTVD E
Sbjct: 223 VLDEHPRFKNKPVPDQIINFYKSNYVQRFHYSRPVRRGTVDPE 265
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 13/71 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E FA D DN G +S SE+ ++ L + P E+A L + D D
Sbjct: 14 KEAFALFDKDNSGSISASELATVMRSLGL---------SPSEAEVA----DLMNEIDVDG 60
Query: 86 NGTVDLEEFKA 96
N ++ EF A
Sbjct: 61 NHAIEFSEFLA 71
>pdb|2YIN|A Chain A, Structure Of The Complex Between Dock2 And Rac1.
pdb|2YIN|B Chain B, Structure Of The Complex Between Dock2 And Rac1
Length = 436
Score = 27.3 bits (59), Expect = 3.0, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Query: 54 VFETHFGIDEKPDPDELARVYSSLFVQFDHDS----NGTVDLE 92
V + H KP PD++ Y S +VQ H S GTVD E
Sbjct: 228 VLDEHPRFKNKPVPDQIINFYKSNYVQRFHYSRPVRRGTVDPE 270
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 26.9 bits (58), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 313 KEAFSLFDKDGDGTITTKELGTVMRSL---------GQNPTEAEL----QDMINEVDADG 359
Query: 86 NGTVDLEEF 94
+GT+D EF
Sbjct: 360 DGTIDFPEF 368
Score = 25.8 bits (55), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 23/83 (27%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFG---IDEKPDPDELARVYSSLFVQF 81
IRE F D D +G +S +E LR T+ G DE + DE+ R +
Sbjct: 385 IREAFRVFDKDGNGYISAAE-------LRHVMTNLGEKLTDE--EVDEMIR-------EA 428
Query: 82 DHDSNGTVDLEEFKAETKQMMLA 104
D D +G V+ EEF QMM A
Sbjct: 429 DIDGDGQVNYEEF----VQMMTA 447
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 26.9 bits (58), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSL---------GQNPTEAEL----QDMINEVDADG 360
Query: 86 NGTVDLEEF 94
+GT+D EF
Sbjct: 361 DGTIDFPEF 369
Score = 25.8 bits (55), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 23/83 (27%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFG---IDEKPDPDELARVYSSLFVQF 81
IRE F D D +G +S +E LR T+ G DE + DE+ R +
Sbjct: 386 IREAFRVFDKDGNGYISAAE-------LRHVMTNLGEKLTDE--EVDEMIR-------EA 429
Query: 82 DHDSNGTVDLEEFKAETKQMMLA 104
D D +G V+ EEF QMM A
Sbjct: 430 DIDGDGQVNYEEF----VQMMTA 448
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 26.9 bits (58), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 313 KEAFSLFDKDGDGTITTKELGTVMRSL---------GQNPTEAEL----QDMINEVDADG 359
Query: 86 NGTVDLEEF 94
+GT+D EF
Sbjct: 360 DGTIDFPEF 368
Score = 25.8 bits (55), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 23/83 (27%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFG---IDEKPDPDELARVYSSLFVQF 81
IRE F D D +G +S +E LR T+ G DE + DE+ R +
Sbjct: 385 IREAFRVFDKDGNGYISAAE-------LRHVMTNLGEKLTDE--EVDEMIR-------EA 428
Query: 82 DHDSNGTVDLEEFKAETKQMMLA 104
D D +G V+ EEF QMM A
Sbjct: 429 DIDGDGQVNYEEF----VQMMTA 447
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 26.9 bits (58), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 313 KEAFSLFDKDGDGTITTKELGTVMRSL---------GQNPTEAEL----QDMINEVDADG 359
Query: 86 NGTVDLEEF 94
+GT+D EF
Sbjct: 360 DGTIDFPEF 368
Score = 25.8 bits (55), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 23/83 (27%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFG---IDEKPDPDELARVYSSLFVQF 81
IRE F D D +G +S +E LR T+ G DE + DE+ R +
Sbjct: 385 IREAFRVFDKDGNGYISAAE-------LRHVMTNLGEKLTDE--EVDEMIR-------EA 428
Query: 82 DHDSNGTVDLEEFKAETKQMMLA 104
D D +G V+ EEF QMM A
Sbjct: 429 DIDGDGQVNYEEF----VQMMTA 447
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 26.9 bits (58), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 13/58 (22%)
Query: 37 DGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDSNGTVDLEEF 94
DG +S E+ K ++ L + P P+EL + + D D +GTVD +EF
Sbjct: 33 DGSISTKELGKVMRMLG---------QNPTPEEL----QEMIDEVDEDGSGTVDFDEF 77
>pdb|1C17|M Chain M, A1c12 Subcomplex Of F1fo Atp Synthase
Length = 177
Score = 26.9 bits (58), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 88 TVDLEEFKAETKQMMLAVANGLGFLPVQMVLEEDSILKKVVE 129
++ ++ TK++ L N F+PV ++LE S+L K V
Sbjct: 71 SIKMKGIGGFTKELTLQPFNHWAFIPVNLILEGVSLLSKPVS 112
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 26.9 bits (58), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 13/58 (22%)
Query: 37 DGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDSNGTVDLEEF 94
DG +S E+ K ++ L + P P+EL + + D D +GTVD +EF
Sbjct: 33 DGSISTKELGKVMRMLG---------QNPTPEEL----QEMIDEVDEDGSGTVDFDEF 77
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 26.6 bits (57), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 17/80 (21%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHD 84
IRE F D D +G +S +E LR T+ G EK +E+ + + D D
Sbjct: 4 IREAFRVFDKDGNGYISAAE-------LRHVMTNLG--EKLTDEEV----DEMIREADID 50
Query: 85 SNGTVDLEEFKAETKQMMLA 104
+G V+ EEF QMM A
Sbjct: 51 GDGQVNYEEF----VQMMTA 66
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 26.6 bits (57), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMK---ELKCLRVFETHFGIDEKPDPDELARVYSSLFVQF 81
+ E F LDT+NDG+L E+++ E L+ +++ I + + + SL
Sbjct: 333 LTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLI--QNEGSTIEDQIDSLMPLL 390
Query: 82 DHDSNGTVDLEEFKA 96
D D +G+++ EF A
Sbjct: 391 DMDGSGSIEYSEFIA 405
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I
Length = 81
Score = 26.6 bits (57), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 75 SSLFVQFDHDSNGTVDLEEFK 95
S LF FD +++G +DLEE K
Sbjct: 18 SDLFRMFDKNADGYIDLEELK 38
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
N60d Calmodulin Refined With Paramagnetism Based
Strategy
Length = 79
Score = 26.6 bits (57), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLG---------QNPTEAEL----QDMINEVDADG 59
Query: 86 NGTVDLEEF 94
+GT+D EF
Sbjct: 60 DGTIDFPEF 68
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 26.6 bits (57), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 13/58 (22%)
Query: 37 DGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDSNGTVDLEEF 94
DG +S E+ K ++ L + P P+EL + + D D +GTVD +E+
Sbjct: 33 DGCISTKELGKVMRMLG---------QNPTPEEL----QEMIDEVDEDGSGTVDFDEW 77
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 26.6 bits (57), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 75 SSLFVQFDHDSNGTVDLEEFK 95
S LF FD +++G +DLEE K
Sbjct: 98 SDLFRMFDKNADGYIDLEELK 118
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 26.6 bits (57), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 13/58 (22%)
Query: 37 DGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDSNGTVDLEEF 94
DG +S E+ K ++ L + P P+EL + + D D +GTVD +E+
Sbjct: 33 DGCISTKELGKVMRMLG---------QNPTPEEL----QEMIDEVDEDGSGTVDFDEW 77
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 26.6 bits (57), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 75 SSLFVQFDHDSNGTVDLEEFK 95
S LF FD +++G +DLEE K
Sbjct: 98 SDLFRMFDKNADGYIDLEELK 118
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 26.6 bits (57), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 75 SSLFVQFDHDSNGTVDLEEFK 95
S LF FD +++G +DLEE K
Sbjct: 10 SDLFRMFDKNADGYIDLEELK 30
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 26.6 bits (57), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E FA D DN+G +S SE+ ++ L + P E+ + L + D D
Sbjct: 14 KEAFALFDKDNNGSISSSELATVMRSLGL---------SPSEAEV----NDLMNEIDVDG 60
Query: 86 NGTVDLEEFKA 96
N ++ EF A
Sbjct: 61 NHQIEFSEFLA 71
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 26.6 bits (57), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 75 SSLFVQFDHDSNGTVDLEEFK 95
S LF FD +++G +DLEE K
Sbjct: 98 SDLFRMFDKNADGYIDLEELK 118
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 26.6 bits (57), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 75 SSLFVQFDHDSNGTVDLEEFK 95
S LF FD +++G +DLEE K
Sbjct: 8 SDLFRMFDKNADGYIDLEELK 28
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 26.6 bits (57), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 17/80 (21%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHD 84
IRE F D D +G +S +E LR T+ G EK +E+ + + D D
Sbjct: 11 IREAFRVFDKDGNGYISAAE-------LRHVMTNLG--EKLTDEEV----DEMIREADID 57
Query: 85 SNGTVDLEEFKAETKQMMLA 104
+G V+ EEF QMM A
Sbjct: 58 GDGQVNYEEF----VQMMTA 73
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 26.6 bits (57), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
Query: 33 DTDNDGLLSHSEMMKELKCLRVFETHF-GIDEKPDPDELARVYSSLFVQFDHDSNGTVDL 91
D++NDG L +EM + L F F GI + ++ F +D D NG +D
Sbjct: 157 DSNNDGKLELTEMARLLPVQENFLLKFQGIKM------CGKEFNKAFELYDQDGNGYIDE 210
Query: 92 EEFKA 96
E A
Sbjct: 211 NELDA 215
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 26.2 bits (56), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 17/80 (21%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHD 84
IRE F D D +G +S +E LR T+ G EK +E+ + + D D
Sbjct: 10 IREAFRVFDKDGNGYISAAE-------LRHVMTNLG--EKLTDEEV----DEMIREADID 56
Query: 85 SNGTVDLEEFKAETKQMMLA 104
+G V+ EEF QMM A
Sbjct: 57 GDGQVNYEEF----VQMMTA 72
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 26.2 bits (56), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 17/80 (21%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHD 84
IRE F D D +G +S +E LR T+ G EK +E+ + + D D
Sbjct: 7 IREAFRVFDKDGNGYISAAE-------LRHVMTNLG--EKLTDEEV----DEMIREADID 53
Query: 85 SNGTVDLEEFKAETKQMMLA 104
+G V+ EEF QMM A
Sbjct: 54 GDGQVNYEEF----VQMMTA 69
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 26.2 bits (56), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E FA D DN+G +S SE+ ++ L + P E+ + L + D D
Sbjct: 13 KEAFALFDKDNNGSISSSELATVMRSLGL---------SPSEAEV----NDLMNEIDVDG 59
Query: 86 NGTVDLEEFKA 96
N ++ EF A
Sbjct: 60 NHQIEFSEFLA 70
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 26.2 bits (56), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ ++ L + P EL + + D D
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLG---------QNPTEAEL----QDMINEVDADG 59
Query: 86 NGTVDLEEF 94
+GT+D EF
Sbjct: 60 DGTIDFPEF 68
Score = 25.8 bits (55), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 17/80 (21%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHD 84
IRE F D D +G +S +E LR T+ G EK +E+ + + D D
Sbjct: 85 IREAFRVFDKDGNGYISAAE-------LRHVMTNLG--EKLTDEEV----DEMIREADID 131
Query: 85 SNGTVDLEEFKAETKQMMLA 104
+G V+ EEF QMM A
Sbjct: 132 GDGQVNYEEF----VQMMTA 147
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 76
Score = 26.2 bits (56), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 75 SSLFVQFDHDSNGTVDLEEFK 95
S LF FD +++G +DLEE K
Sbjct: 13 SDLFRMFDKNADGYIDLEELK 33
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal
Domain Of Yeast Calmodulin
Length = 77
Score = 26.2 bits (56), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E FA D DN+G +S SE+ ++ L + P E+ + L + D D
Sbjct: 13 KEAFALFDKDNNGSISSSELATVMRSLGL---------SPSEAEV----NDLMNEIDVDG 59
Query: 86 NGTVDLEEFKA 96
N ++ EF A
Sbjct: 60 NHQIEFSEFLA 70
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 26.2 bits (56), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 14/71 (19%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFET-HFGIDEKPDPDELARVYSSLFVQFDH 83
+R+ F DT+ DG +S SE+ + ++ L + H I+E + D
Sbjct: 90 LRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEE-------------IIRDVDL 136
Query: 84 DSNGTVDLEEF 94
+ +G VD EEF
Sbjct: 137 NGDGRVDFEEF 147
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal
Muscle Troponin-C
Length = 76
Score = 26.2 bits (56), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 13/66 (19%)
Query: 29 FAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDSNGT 88
F D D G +S E+ ++ L + P +EL ++ + D D +GT
Sbjct: 15 FDMFDADGGGDISTKELGTVMRMLG---------QNPTKEEL----DAIIEEVDEDGSGT 61
Query: 89 VDLEEF 94
+D EEF
Sbjct: 62 IDFEEF 67
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 26.2 bits (56), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 17/80 (21%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHD 84
IRE F D D +G +S +E LR T+ G EK +E+ + + D D
Sbjct: 8 IREAFRVFDKDGNGYISAAE-------LRHVMTNLG--EKLTDEEV----DEMIREADID 54
Query: 85 SNGTVDLEEFKAETKQMMLA 104
+G V+ EEF QMM A
Sbjct: 55 GDGQVNYEEF----VQMMTA 70
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 26.2 bits (56), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E FA D DN+G +S SE+ ++ L + P E+ + L + D D
Sbjct: 13 KEAFALFDKDNNGSISSSELATVMRSLGL---------SPSEAEV----NDLMNEIDVDG 59
Query: 86 NGTVDLEEFKA 96
N ++ EF A
Sbjct: 60 NHQIEFSEFLA 70
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 26.2 bits (56), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKP-DPDELARVYSSLFVQFDH 83
++ F+ D D +G +S +EM++ ++ +++ + + P D + +F Q D
Sbjct: 101 LKWAFSMYDLDGNGYISKAEMLEIVQA--IYKMVSSVMKMPEDESTPEKRTEKIFRQMDT 158
Query: 84 DSNGTVDLEEF 94
+ +G + LEEF
Sbjct: 159 NRDGKLSLEEF 169
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain
Of Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr,
40 Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle,
Nmr, Minimized Average Structure
Length = 90
Score = 26.2 bits (56), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 13/66 (19%)
Query: 29 FAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDSNGT 88
F D D G +S E+ ++ L + P +EL ++ + D D +GT
Sbjct: 26 FDMFDADGGGDISTKELGTVMRMLG---------QNPTKEEL----DAIIEEVDEDGSGT 72
Query: 89 VDLEEF 94
+D EEF
Sbjct: 73 IDFEEF 78
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 26.2 bits (56), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 13/58 (22%)
Query: 37 DGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDSNGTVDLEEF 94
DG +S E+ K + L + P P+EL + D D +GTVD +EF
Sbjct: 33 DGCISTKELGKVXRXLG---------QNPTPEELQEXIDEV----DEDGSGTVDFDEF 77
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 25.8 bits (55), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 76 SLFVQFDHDSNGTVDLEEFKAETK 99
++F FD D +GT+ L+E+KA K
Sbjct: 117 AVFDIFDKDGSGTITLDEWKAYGK 140
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 25.8 bits (55), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 76 SLFVQFDHDSNGTVDLEEFKAETK 99
++F FD D +GT+ L+E+KA K
Sbjct: 117 AVFDIFDKDGSGTITLDEWKAYGK 140
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 25.8 bits (55), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 76 SLFVQFDHDSNGTVDLEEFKAETK 99
++F FD D +GT+ L+E+KA K
Sbjct: 117 AVFDIFDKDGSGTITLDEWKAYGK 140
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal
Domain Of Akazara Scallop Troponin C In Complex With A
Troponin I Fragment
Length = 74
Score = 25.8 bits (55), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 76 SLFVQFDHDSNGTVDLEEFKA 96
++ + D D +GTVD EEFK
Sbjct: 47 NMIAETDTDGSGTVDYEEFKC 67
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 25.8 bits (55), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 76 SLFVQFDHDSNGTVDLEEFKAETK 99
++F FD D +GT+ L+E+KA K
Sbjct: 117 AVFDIFDKDGSGTITLDEWKAYGK 140
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
Length = 149
Score = 25.8 bits (55), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ + L + P EL + + D D
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVXRSLG---------QNPTEAELQDXINEV----DADG 60
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 61 NGTIDFPEF 69
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 25.8 bits (55), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 76 SLFVQFDHDSNGTVDLEEFKAETK 99
++F FD D +GT+ L+E+KA K
Sbjct: 117 AVFDIFDKDGSGTITLDEWKAYGK 140
>pdb|2QMO|A Chain A, Crystal Structure Of Dethiobiotin Synthetase (Biod) From
Helicobacter Pylori
Length = 220
Score = 25.8 bits (55), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 72 RVYSSLFVQFDHDSNGTVDLEEFKAE----TKQMMLAVANGLGFLPVQMVLEEDSI 123
+V + L Q + D N +D + TK L + G G L V + LEE+ +
Sbjct: 79 KVSAPLIAQQEEDPNAPIDTDNLTQRLHNFTKTYDLVIVEGAGGLCVPITLEENXL 134
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 25.8 bits (55), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 13/69 (18%)
Query: 26 RERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHDS 85
+E F+ D D DG ++ E+ + L + P EL + + D D
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVXRSLG---------QNPTEAELQDXINEV----DADG 59
Query: 86 NGTVDLEEF 94
NGT+D EF
Sbjct: 60 NGTIDFPEF 68
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 25.4 bits (54), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 42 HSEMMKELKCLRVFETHF-GIDEKPDPDELARVYSS-LFVQFDHDSNGTVDLEEF 94
+ +KE R+ F I K P+ + Y+ +F FD +S+GT+D +E+
Sbjct: 32 YQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEY 86
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With
Calcium Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium
Sensor In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr,
22 Structures
Length = 201
Score = 25.4 bits (54), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 42 HSEMMKELKCLRVFETHF-GIDEKPDPDELARVYSS-LFVQFDHDSNGTVDLEEF 94
+ +KE R+ F I K P+ + Y+ +F FD +S+GT+D +E+
Sbjct: 31 YQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEY 85
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 25.4 bits (54), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 42 HSEMMKELKCLRVFETHF-GIDEKPDPDELARVYSS-LFVQFDHDSNGTVDLEEF 94
+ +KE R+ F I K P+ + Y+ +F FD +S+GT+D +E+
Sbjct: 31 YQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEY 85
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 25.4 bits (54), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 13/70 (18%)
Query: 25 IRERFAHLDTDNDGLLSHSEMMKELKCLRVFETHFGIDEKPDPDELARVYSSLFVQFDHD 84
+RE F D D DG +S +E LR + G EK +E+ + + D D
Sbjct: 85 MREAFKIFDRDGDGFISPAE-------LRFVMINLG--EKVTDEEI----DEMIREADFD 131
Query: 85 SNGTVDLEEF 94
+G ++ EEF
Sbjct: 132 GDGMINYEEF 141
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,956,843
Number of Sequences: 62578
Number of extensions: 156660
Number of successful extensions: 879
Number of sequences better than 100.0: 201
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 169
Number of HSP's that attempted gapping in prelim test: 625
Number of HSP's gapped (non-prelim): 354
length of query: 138
length of database: 14,973,337
effective HSP length: 89
effective length of query: 49
effective length of database: 9,403,895
effective search space: 460790855
effective search space used: 460790855
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 46 (22.3 bits)