Query         043803
Match_columns 490
No_of_seqs    196 out of 1934
Neff          10.9
Searched_HMMs 46136
Date          Fri Mar 29 08:27:46 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043803.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043803hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 6.6E-82 1.4E-86  603.7  45.2  434   26-477    19-488 (489)
  2 KOG0158 Cytochrome P450 CYP3/C 100.0 3.3E-79 7.1E-84  575.6  38.1  425   33-477    31-499 (499)
  3 PLN02971 tryptophan N-hydroxyl 100.0 5.8E-76 1.3E-80  585.4  45.5  441   29-478    53-535 (543)
  4 PLN03234 cytochrome P450 83B1; 100.0 1.1E-75 2.4E-80  581.2  45.4  446   23-476    18-498 (499)
  5 PLN03112 cytochrome P450 famil 100.0 1.6E-74 3.5E-79  574.5  47.7  472    5-480     4-511 (514)
  6 PLN02687 flavonoid 3'-monooxyg 100.0 2.5E-74 5.3E-79  572.0  46.9  442   30-477    31-509 (517)
  7 PLN00110 flavonoid 3',5'-hydro 100.0 2.1E-74 4.5E-79  569.0  45.7  461    7-477     3-497 (504)
  8 PLN02183 ferulate 5-hydroxylas 100.0 3.1E-74 6.8E-79  571.2  45.4  443   26-477    29-512 (516)
  9 PLN00168 Cytochrome P450; Prov 100.0 3.4E-73 7.4E-78  564.1  46.1  472    3-478     2-518 (519)
 10 PLN02966 cytochrome P450 83A1  100.0 7.2E-73 1.6E-77  560.0  43.6  438   27-474    23-497 (502)
 11 PLN02394 trans-cinnamate 4-mon 100.0 7.9E-72 1.7E-76  554.2  44.9  442   26-477    23-502 (503)
 12 PTZ00404 cytochrome P450; Prov 100.0 1.3E-71 2.8E-76  549.7  42.1  425   26-476    22-482 (482)
 13 PLN03018 homomethionine N-hydr 100.0 8.5E-71 1.8E-75  544.1  47.5  473    1-479     1-526 (534)
 14 KOG0157 Cytochrome P450 CYP4/C 100.0 6.2E-72 1.3E-76  546.6  34.9  425   31-477    33-496 (497)
 15 PLN02655 ent-kaurene oxidase   100.0 2.3E-70   5E-75  537.1  40.8  423   35-478     1-465 (466)
 16 PLN02169 fatty acid (omega-1)- 100.0 3.8E-70 8.2E-75  537.6  40.7  408   47-476    81-499 (500)
 17 PLN02290 cytokinin trans-hydro 100.0   6E-70 1.3E-74  542.0  41.5  408   47-477   105-515 (516)
 18 KOG0159 Cytochrome P450 CYP11/ 100.0 7.6E-70 1.7E-74  499.7  35.2  424   32-477    49-518 (519)
 19 PLN02500 cytochrome P450 90B1  100.0 4.5E-69 9.8E-74  531.8  42.5  412   29-475    34-488 (490)
 20 PLN03195 fatty acid omega-hydr 100.0 4.8E-69   1E-73  535.1  38.7  429   34-477    31-516 (516)
 21 PF00067 p450:  Cytochrome P450 100.0 3.3E-68 7.1E-73  527.0  31.5  424   35-473     1-463 (463)
 22 PLN02774 brassinosteroid-6-oxi 100.0 1.4E-66 3.1E-71  509.9  40.9  401   29-474    27-461 (463)
 23 PLN02738 carotene beta-ring hy 100.0   1E-66 2.2E-71  520.3  40.3  416   46-480   175-598 (633)
 24 PLN02196 abscisic acid 8'-hydr 100.0 1.4E-66   3E-71  509.5  40.0  400   27-476    29-462 (463)
 25 PLN02426 cytochrome P450, fami 100.0 8.7E-66 1.9E-70  505.8  38.5  402   49-477    86-500 (502)
 26 PLN02302 ent-kaurenoic acid ox 100.0 8.7E-65 1.9E-69  503.6  42.5  411   28-478    37-489 (490)
 27 PLN03141 3-epi-6-deoxocathaste 100.0 6.9E-65 1.5E-69  496.8  39.2  409   29-478     3-451 (452)
 28 PLN02987 Cytochrome P450, fami 100.0 4.8E-64   1E-68  489.7  43.0  406   29-477    26-469 (472)
 29 PLN02936 epsilon-ring hydroxyl 100.0 1.1E-64 2.4E-69  499.0  38.5  415   46-479    60-484 (489)
 30 KOG0684 Cytochrome P450 [Secon 100.0 3.4E-60 7.4E-65  425.0  31.3  418   33-477    31-485 (486)
 31 PLN02648 allene oxide synthase 100.0 3.9E-54 8.3E-59  416.7  28.6  371   30-448    14-462 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 5.9E-53 1.3E-57  403.9  31.7  337   47-448    49-387 (411)
 33 PF12273 RCR:  Chitin synthesis  79.5     1.9   4E-05   34.1   2.8   33    4-37      2-34  (130)
 34 PF08492 SRP72:  SRP72 RNA-bind  64.1     5.1 0.00011   26.3   1.6    8  388-395    44-51  (59)
 35 PHA03049 IMV membrane protein;  59.5      29 0.00064   23.1   4.4   41   14-64     12-52  (68)
 36 PF12554 MOZART1:  Mitotic-spin  58.9      35 0.00076   21.3   4.5   43  266-308     5-47  (48)
 37 PF05952 ComX:  Bacillus compet  55.1      13 0.00028   24.1   2.3   25  289-313     4-28  (57)
 38 KOG3506 40S ribosomal protein   54.7     5.7 0.00012   25.2   0.6   10  411-420    12-21  (56)
 39 PHA02681 ORF089 virion membran  53.7      41 0.00088   23.5   4.6   35    1-36      1-35  (92)
 40 PHA02902 putative IMV membrane  48.6      46   0.001   21.9   4.0   22    7-28      6-27  (70)
 41 PRK06789 flagellar motor switc  45.2      27 0.00059   24.2   2.8   39  332-370    21-62  (74)
 42 PF12508 DUF3714:  Protein of u  42.9      23 0.00049   30.2   2.6   43  325-369    51-94  (200)
 43 PF09201 SRX:  SRX;  InterPro:   41.1      23 0.00051   27.6   2.2   23  418-440    18-40  (148)
 44 PF05961 Chordopox_A13L:  Chord  38.6      96  0.0021   20.9   4.4   22    8-30      7-28  (68)
 45 PF15206 FAM209:  FAM209 family  36.9      28  0.0006   27.2   2.0   38    8-45     41-78  (150)
 46 PF14129 DUF4296:  Domain of un  34.1 1.8E+02  0.0038   20.9   5.9   49  264-312    30-78  (87)
 47 PF11138 DUF2911:  Protein of u  28.8      81  0.0018   25.3   3.5   41  350-391    52-99  (145)
 48 COG3954 PrkB Phosphoribulokina  27.8 1.4E+02   0.003   25.2   4.8   64  277-340    15-90  (289)
 49 PF12273 RCR:  Chitin synthesis  25.5      30 0.00065   27.2   0.6   33   10-45      4-36  (130)
 50 COG3115 ZipA Cell division pro  25.5      84  0.0018   28.4   3.3   26    1-26      1-26  (324)
 51 COG0851 MinE Septum formation   24.1 1.2E+02  0.0026   21.8   3.3   42  273-314     4-52  (88)
 52 PF15183 MRAP:  Melanocortin-2   23.7 2.4E+02  0.0051   20.0   4.5   23    6-28     41-63  (90)
 53 TIGR00589 ogt O-6-methylguanin  23.2 1.3E+02  0.0028   21.3   3.4   60  299-359     2-66  (80)
 54 PF12444 Sox_N:  Sox developmen  22.7      60  0.0013   23.2   1.6   20  428-447    60-79  (84)
 55 PRK05933 type III secretion sy  22.3      95  0.0021   28.5   3.1   42  329-370   317-362 (372)
 56 PTZ00218 40S ribosomal protein  22.1      40 0.00087   21.6   0.6   10  412-421    11-20  (54)
 57 COG1759 5-formaminoimidazole-4  21.0 1.6E+02  0.0034   27.2   4.2   41  330-370   276-324 (361)
 58 COG4459 NapE Periplasmic nitra  20.9 1.4E+02   0.003   19.3   2.7   28    9-40     34-61  (62)
 59 PF14483 Cut8_M:  Cut8 dimerisa  20.7 1.6E+02  0.0034   17.4   2.8   16  291-306    19-35  (38)
 60 PF06024 DUF912:  Nucleopolyhed  20.6      65  0.0014   24.0   1.5    7   11-17     72-78  (101)
 61 PRK13467 F0F1 ATP synthase sub  20.5 1.5E+02  0.0033   20.1   3.1   25  284-308    20-44  (66)
 62 COG2101 SPT15 TATA-box binding  20.0      44 0.00094   27.5   0.5   37  385-425    35-71  (185)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=6.6e-82  Score=603.68  Aligned_cols=434  Identities=45%  Similarity=0.775  Sum_probs=381.5

Q ss_pred             ccCCCCCCCCCCCCCCCccc-------------------------------ceeEEeCCHHHHHHHHHhccccccCCCc-
Q 043803           26 GRSKITSNLPPSPLALPIIG-------------------------------LSCIVACSPETAKEILKTHETSFCDRPI-   73 (490)
Q Consensus        26 ~~~~~~~~~pPgP~~~PiiG-------------------------------~~~vvv~dp~~i~~il~~~~~~f~~~~~-   73 (490)
                      .+++++.++||||+++||||                               .+.|||+|+++++|++++++..|++|+. 
T Consensus        19 ~~~~~~~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~   98 (489)
T KOG0156|consen   19 KKYRKRRNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDP   98 (489)
T ss_pred             HhccCCCCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCc
Confidence            33444489999999999999                               6899999999999999999999999997 


Q ss_pred             cchhhhhccCCceeEeCCCChhHHHhHHHHHhhccchhhhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHH
Q 043803           74 SATVDYLTYGSADFAFAPYGPHWKFMKKICMTQLLGGQTLNQFIPIRSEEIKRFMQLMLKKAKASEAVDVGRELIRLTNN  153 (490)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~  153 (490)
                      ......+.+++.+++++.+|+.|+.+||.....+++.+.+++....-.++++.+++.+.+ ...+++||+...+..++.+
T Consensus        99 ~~~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~~~~~vdl~~~l~~~~~n  177 (489)
T KOG0156|consen   99 TATLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-SKKGEPVDLSELLDLLVGN  177 (489)
T ss_pred             hhhHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-cCCCceeeHHHHHHHHHHH
Confidence            334566777777899999999999999999999999999999888889999999999988 3333799999999999999


Q ss_pred             HHHHHHhccccCCCh-hhHHHHHHHHHHHHHhhcccccccccc-cccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 043803          154 VMPRMTMGQICSNNE-EEADEVMNLVLSIFELSGKFNLADCIW-FCKNLD-LQGFGKKMKEARKRFDTMMERIIKEHEET  230 (490)
Q Consensus       154 vi~~~~fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~l~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  230 (490)
                      +|++++||.+++..+ +...++.+.+.+.....+.+.+.+++| ++++++ ..+..++++...++++.++++.++++++.
T Consensus       178 vI~~~~fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~  257 (489)
T KOG0156|consen  178 VICRMLFGRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREK  257 (489)
T ss_pred             HHHHHHhCCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            999999999999753 455668999999999999999999999 566664 34577788888888999999999999886


Q ss_pred             hhccccCCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhccccchHHHHHHHHHHHHhChHHHHHHHHHHhH
Q 043803          231 RKTNKETGRDDAPNDLLDILLTVSEDESSEIKLTRENVKAFFMNIFSGGTDTSAITTEWALAELINHLDIMNKAKEEIDV  310 (490)
Q Consensus       231 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~l~~~~~~~l~Ag~dTt~~~l~~~l~~L~~~p~~q~~l~~Ei~~  310 (490)
                      . ..+      +..|+++.|++..+++..+. +++++|.+.+.++++||+|||++|+.|++.+|++||++|+|+++||++
T Consensus       258 ~-~~~------~~~D~vD~lL~~~~~~~~~~-~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~  329 (489)
T KOG0156|consen  258 I-GDE------EGRDFVDALLKLMKEEKAEG-LTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDE  329 (489)
T ss_pred             h-ccC------CCCcHHHHHHHhhcccccCC-CCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence            5 111      23899999999865433232 999999999999999999999999999999999999999999999999


Q ss_pred             hhCCCCccCccccCCChhHHHHHHhhccCCCCCCCcc-cccccceeecCEEeCCCCEEEeehhhccCCCCCCCCCCCCCC
Q 043803          311 VAGKNRLVEESDIANFPYLQALVKETLRLHPAGPMSV-RESTENCTINGYEIPAKTRVFINVWSIGRDPKHWEAPLEFRP  389 (490)
Q Consensus       311 ~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~-R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P  389 (490)
                      ++|.++.++.+|+.+||||+|||+|++|++|++|.+. |.+++|++++||.|||||.|+++.|++||||++|+||++|+|
T Consensus       330 vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~P  409 (489)
T KOG0156|consen  330 VVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKP  409 (489)
T ss_pred             HhCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccCh
Confidence            9998888999999999999999999999999999997 999999999999999999999999999999999999999999


Q ss_pred             CccccCCCCccccccCCccceecCCCCCCCCCchHHHHHHHHHHHHHHHhhceeeecCCCCccccCcCCCCccccCCCCc
Q 043803          390 ERFIAEDGKSQLAVRGKHYHYIPFGSGRRACPGISLALHMVHSTLAAMIQCFDWKVNGGDGATVDMEEAPGLTLPRAHPL  469 (490)
Q Consensus       390 ~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  469 (490)
                      |||++.+     +.+.....++|||.|+|+|||..+|++++.+++++||++|+|+++++   ++++.+.. ++...+.|+
T Consensus       410 ERFl~~~-----d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~---~~d~~e~~-~~~~~~~pl  480 (489)
T KOG0156|consen  410 ERFLDSN-----DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG---KVDMEEAG-LTLKKKKPL  480 (489)
T ss_pred             hhhcCCc-----cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC---CCCCcccc-cceecCCcc
Confidence            9999862     12235678999999999999999999999999999999999999865   45565553 667778898


Q ss_pred             eeeccccC
Q 043803          470 ICVPAARL  477 (490)
Q Consensus       470 ~~~~~~r~  477 (490)
                      .+...+|.
T Consensus       481 ~~~~~~r~  488 (489)
T KOG0156|consen  481 KAVPVPRL  488 (489)
T ss_pred             eeeeecCC
Confidence            88887774


No 2  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3.3e-79  Score=575.55  Aligned_cols=425  Identities=26%  Similarity=0.375  Sum_probs=337.9

Q ss_pred             CCCCCCCCCCccc--------------------------------ceeEEeCCHHHHHHHHHhccccccCCC--ccchhh
Q 043803           33 NLPPSPLALPIIG--------------------------------LSCIVACSPETAKEILKTHETSFCDRP--ISATVD   78 (490)
Q Consensus        33 ~~pPgP~~~PiiG--------------------------------~~~vvv~dp~~i~~il~~~~~~f~~~~--~~~~~~   78 (490)
                      +=+|||+++|++|                                ++.++|+|||.+++|+.++.++|.++.  ......
T Consensus        31 rGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~~d~~  110 (499)
T KOG0158|consen   31 RGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIYGDPE  110 (499)
T ss_pred             CCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCcCCCC
Confidence            4788888899999                                788999999999999999999999853  222111


Q ss_pred             hhccCCceeEeCCCChhHHHhHHHHHhhccchhhhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHHHHHH
Q 043803           79 YLTYGSADFAFAPYGPHWKFMKKICMTQLLGGQTLNQFIPIRSEEIKRFMQLMLKKAKASEAVDVGRELIRLTNNVMPRM  158 (490)
Q Consensus        79 ~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~  158 (490)
                      .  ......+|..+|++||++|..+ +|.|++.+++.+.+.+++.++++++.+.++...+..+++.+.+..+|.|||+++
T Consensus       111 ~--~l~~~~Lf~~~g~~WK~lR~~l-sP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~DVI~~~  187 (499)
T KOG0158|consen  111 D--PLSALNLFFLRGERWKRLRTKL-SPTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEIKDLCARYTTDVIGSC  187 (499)
T ss_pred             C--cccccCchhccCchHHHHHHhh-ccccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccHHHHHHHHHHHHHhHh
Confidence            1  1112447778899999999998 799999999999999999999999999987554468899999999999999999


Q ss_pred             HhccccCCChhhHHHHHHHHHHHHHh-hccccc----cccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 043803          159 TMGQICSNNEEEADEVMNLVLSIFEL-SGKFNL----ADCIWFCKNLDLQGFGKKMKEARKRFDTMMERIIKEHEETRKT  233 (490)
Q Consensus       159 ~fG~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  233 (490)
                      +||.+.++..+...++...-...+.. .....+    ...+|.+....  .......+..+.+.+++.+.++.|...   
T Consensus       188 AfG~~~~s~~d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l--~~~~~~~~~~~~~~~~v~~~v~~R~~~---  262 (499)
T KOG0158|consen  188 AFGLDANSLRDPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPL--RVKLFPEDVTDFFRKLVNSRVEQREKE---  262 (499)
T ss_pred             hcccchhhhcCchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhh--hcccChHHHHHHHHHHHHHHHHHHHhc---
Confidence            99999987765666666555554443 222111    11223322210  001112233444455555555555211   


Q ss_pred             cccCCCCCCCCcHHHHHHhhccc---ccccc-cCCHHHHHHHHHHHhhccccchHHHHHHHHHHHHhChHHHHHHHHHHh
Q 043803          234 NKETGRDDAPNDLLDILLTVSED---ESSEI-KLTRENVKAFFMNIFSGGTDTSAITTEWALAELINHLDIMNKAKEEID  309 (490)
Q Consensus       234 ~~~~~~~~~~~d~l~~ll~~~~~---~~~~~-~l~~~~l~~~~~~~l~Ag~dTt~~~l~~~l~~L~~~p~~q~~l~~Ei~  309 (490)
                       +     ..+.|+++.|++...+   +.... .+|.++|+++|+.|++||.||||++|++++|+||+||++|+|||+||+
T Consensus       263 -~-----~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~  336 (499)
T KOG0158|consen  263 -N-----IERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLREEID  336 (499)
T ss_pred             -C-----CCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHH
Confidence             1     2789999999998643   11112 499999999999999999999999999999999999999999999999


Q ss_pred             HhhCCCCccCccccCCChhHHHHHHhhccCCCCCCCcccccccceeec-CEEeCCCCEEEeehhhccCCCCCCCCCCCCC
Q 043803          310 VVAGKNRLVEESDIANFPYLQALVKETLRLHPAGPMSVRESTENCTIN-GYEIPAKTRVFINVWSIGRDPKHWEAPLEFR  388 (490)
Q Consensus       310 ~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~~~~l~-g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~  388 (490)
                      ++......++++.+.+|+||++||+||||+||++|..-|.+++|++++ |+.||||+.|.++++++||||++||||++|+
T Consensus       337 ~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~  416 (499)
T KOG0158|consen  337 EVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPFLNRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKFK  416 (499)
T ss_pred             HHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCcccccceecCceecCCCeEeCCCCEEEeecccccCCcccCCCcccCC
Confidence            997654449999999999999999999999999999669999999999 9999999999999999999999999999999


Q ss_pred             CCccccCCCCccccccCCccceecCCCCCCCCCchHHHHHHHHHHHHHHHhhceeeecCCCCccccCcCCCCccccCCCC
Q 043803          389 PERFIAEDGKSQLAVRGKHYHYIPFGSGRRACPGISLALHMVHSTLAAMIQCFDWKVNGGDGATVDMEEAPGLTLPRAHP  468 (490)
Q Consensus       389 P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  468 (490)
                      ||||.+.+.+     ..++..|+|||.|||+|+|++||.+|+|++|++||++|+++..+. ..+.......+.++.|.++
T Consensus       417 PERF~~~~~~-----~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~-t~~~~~~~~~~~~l~pk~g  490 (499)
T KOG0158|consen  417 PERFEEENNK-----SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPT-TIIPLEGDPKGFTLSPKGG  490 (499)
T ss_pred             CccCCCCccc-----ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCc-ccCcccCCccceeeecCCc
Confidence            9999976421     357789999999999999999999999999999999999999873 2222111223667788999


Q ss_pred             ceeeccccC
Q 043803          469 LICVPAARL  477 (490)
Q Consensus       469 ~~~~~~~r~  477 (490)
                      +++++++|.
T Consensus       491 i~Lkl~~r~  499 (499)
T KOG0158|consen  491 IWLKLEPRD  499 (499)
T ss_pred             eEEEEEeCC
Confidence            999999884


No 3  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=5.8e-76  Score=585.39  Aligned_cols=441  Identities=30%  Similarity=0.553  Sum_probs=349.1

Q ss_pred             CCCCCCCCCCCCCCccc---------------------------------ceeEEeCCHHHHHHHHHhccccccCCCccc
Q 043803           29 KITSNLPPSPLALPIIG---------------------------------LSCIVACSPETAKEILKTHETSFCDRPISA   75 (490)
Q Consensus        29 ~~~~~~pPgP~~~PiiG---------------------------------~~~vvv~dp~~i~~il~~~~~~f~~~~~~~   75 (490)
                      +++.++||||+++|++|                                 .++|+|+||++++++|.++...|.+++...
T Consensus        53 ~r~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~  132 (543)
T PLN02971         53 KKLHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTY  132 (543)
T ss_pred             CCCCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCccc
Confidence            44668999999999999                                 578999999999999999888898887544


Q ss_pred             hhhhhccCCceeEeCCCChhHHHhHHHHHhhccchhhhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHHH
Q 043803           76 TVDYLTYGSADFAFAPYGPHWKFMKKICMTQLLGGQTLNQFIPIRSEEIKRFMQLMLKKAKASEAVDVGRELIRLTNNVM  155 (490)
Q Consensus        76 ~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi  155 (490)
                      ....+..+..++++..+|+.|+++||.+..+++++..++.+.+.++++++.+++.+.+...+++++|+.+.+..++++++
T Consensus       133 ~~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi  212 (543)
T PLN02971        133 AQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAI  212 (543)
T ss_pred             chhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHH
Confidence            33333333234678888999999999997778887777788888888999998888765556678999999999999999


Q ss_pred             HHHHhccccCCC-----hhhHHHHHHHHHHHHHhhc---cccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 043803          156 PRMTMGQICSNN-----EEEADEVMNLVLSIFELSG---KFNLADCIWFCKNLDLQGFGKKMKEARKRFDTMMERIIKEH  227 (490)
Q Consensus       156 ~~~~fG~~~~~~-----~~~~~~~~~~~~~~~~~~~---~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~  227 (490)
                      ++++||.++...     ++...+..+.+...+....   ...+.+.+|++++++..+..+......+.+.+++.+.++++
T Consensus       213 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  292 (543)
T PLN02971        213 KRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDER  292 (543)
T ss_pred             HHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999976321     1111223333444333221   11234556666554322344556667778888899998887


Q ss_pred             HHhhhccccCCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhccccchHHHHHHHHHHHHhChHHHHHHHHH
Q 043803          228 EETRKTNKETGRDDAPNDLLDILLTVSEDESSEIKLTRENVKAFFMNIFSGGTDTSAITTEWALAELINHLDIMNKAKEE  307 (490)
Q Consensus       228 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~l~~~~~~~l~Ag~dTt~~~l~~~l~~L~~~p~~q~~l~~E  307 (490)
                      ++....+.  .  ....|+++.|++..++ +....++++++.+++.++++||+|||+++++|++++|++||++|+|+++|
T Consensus       293 ~~~~~~~~--~--~~~~d~l~~ll~~~~~-~~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~E  367 (543)
T PLN02971        293 IKMWREGK--R--TQIEDFLDIFISIKDE-AGQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEE  367 (543)
T ss_pred             HHHHhccC--C--CCCcCHHHHHHhhhcc-cCCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            66433211  0  1346999999986322 11124899999999999999999999999999999999999999999999


Q ss_pred             HhHhhCCCCccCccccCCChhHHHHHHhhccCCCCCCCcc-cccccceeecCEEeCCCCEEEeehhhccCCCCCCCCCCC
Q 043803          308 IDVVAGKNRLVEESDIANFPYLQALVKETLRLHPAGPMSV-RESTENCTINGYEIPAKTRVFINVWSIGRDPKHWEAPLE  386 (490)
Q Consensus       308 i~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~-R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~  386 (490)
                      |++++++++.++++++.+|||++|||+|+||++|++|... |.+.+|++++||.||||+.|+++.|++||||++|+||++
T Consensus       368 I~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~  447 (543)
T PLN02971        368 IDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLS  447 (543)
T ss_pred             HHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCccc
Confidence            9999987788999999999999999999999999999865 999999999999999999999999999999999999999


Q ss_pred             CCCCccccCCCCccccccCCccceecCCCCCCCCCchHHHHHHHHHHHHHHHhhceeeecCCCCccccCcCCCCccccCC
Q 043803          387 FRPERFIAEDGKSQLAVRGKHYHYIPFGSGRRACPGISLALHMVHSTLAAMIQCFDWKVNGGDGATVDMEEAPGLTLPRA  466 (490)
Q Consensus       387 F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  466 (490)
                      |+||||+++++.  ......++.|+|||.|+|+|+|++||++|+++++++||++|+|+++++ ....++.+.++ ++..+
T Consensus       448 F~PeRfl~~~~~--~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~-~~~~~~~~~~~-~~~~~  523 (543)
T PLN02971        448 FKPERHLNECSE--VTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGS-ETRVELMESSH-DMFLS  523 (543)
T ss_pred             cCcccCCCCCcc--ccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCC-CCCcchhhhcC-ccccc
Confidence            999999974311  011124568999999999999999999999999999999999998765 33456666666 44456


Q ss_pred             CCceeeccccCC
Q 043803          467 HPLICVPAARLN  478 (490)
Q Consensus       467 ~~~~~~~~~r~~  478 (490)
                      .++.+.+++|..
T Consensus       524 ~~~~~~~~~~~~  535 (543)
T PLN02971        524 KPLVMVGELRLS  535 (543)
T ss_pred             ccceeeeeecCC
Confidence            799999999843


No 4  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=1.1e-75  Score=581.20  Aligned_cols=446  Identities=34%  Similarity=0.637  Sum_probs=360.3

Q ss_pred             HHhccCCCCCCCCCCCCCCCccc-------------------------------ceeEEeCCHHHHHHHHHhccccccCC
Q 043803           23 TILGRSKITSNLPPSPLALPIIG-------------------------------LSCIVACSPETAKEILKTHETSFCDR   71 (490)
Q Consensus        23 ~~~~~~~~~~~~pPgP~~~PiiG-------------------------------~~~vvv~dp~~i~~il~~~~~~f~~~   71 (490)
                      .++++.+++.+.||||+++|++|                               .+.|+++||+++++|+.++...|..+
T Consensus        18 ~~~~~~~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r   97 (499)
T PLN03234         18 FLRSTTKKSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTAR   97 (499)
T ss_pred             HHHHhcCCCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCC
Confidence            44455666778999999999999                               57899999999999999887788877


Q ss_pred             CccchhhhhccCCceeEeCCCChhHHHhHHHHHhhccchhhhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHH
Q 043803           72 PISATVDYLTYGSADFAFAPYGPHWKFMKKICMTQLLGGQTLNQFIPIRSEEIKRFMQLMLKKAKASEAVDVGRELIRLT  151 (490)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~  151 (490)
                      +...........+....+..+++.|+++||.+..++|+++++..+.+.++++++++++.+.+.+.+++++|+.+.+..++
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t  177 (499)
T PLN03234         98 PLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFT  177 (499)
T ss_pred             CCchhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHH
Confidence            75433333232223444567789999999986578999999999999999999999999987666678999999999999


Q ss_pred             HHHHHHHHhccccCCChhhHHHHHHHHHHHHHhhcccccccccccccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 043803          152 NNVMPRMTMGQICSNNEEEADEVMNLVLSIFELSGKFNLADCIWFCKNLD-LQGFGKKMKEARKRFDTMMERIIKEHEET  230 (490)
Q Consensus       152 ~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  230 (490)
                      +|+++.++||.+++..+....++.+.+.+.+.......+...+|+++++. ..+..++..++.+.+.+++.+.++++++.
T Consensus       178 ~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~  257 (499)
T PLN03234        178 NCVVCRQAFGKRYNEYGTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDP  257 (499)
T ss_pred             HHHHHHHHhCCcccccchhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            99999999999887554444556666655554433333444455544321 12345677788899999999999887654


Q ss_pred             hhccccCCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhccccchHHHHHHHHHHHHhChHHHHHHHHHHhH
Q 043803          231 RKTNKETGRDDAPNDLLDILLTVSEDESSEIKLTRENVKAFFMNIFSGGTDTSAITTEWALAELINHLDIMNKAKEEIDV  310 (490)
Q Consensus       231 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~l~~~~~~~l~Ag~dTt~~~l~~~l~~L~~~p~~q~~l~~Ei~~  310 (490)
                      ....      ....|+++.|++...++.++..++++++++++.++++||+|||+++|+|++|+|++||++|+|+++|+++
T Consensus       258 ~~~~------~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~  331 (499)
T PLN03234        258 NRPK------QETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRN  331 (499)
T ss_pred             cccC------CCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence            2211      1457899999876433222235899999999999999999999999999999999999999999999999


Q ss_pred             hhCCCCccCccccCCChhHHHHHHhhccCCCCCCCcc-cccccceeecCEEeCCCCEEEeehhhccCCCCCC-CCCCCCC
Q 043803          311 VAGKNRLVEESDIANFPYLQALVKETLRLHPAGPMSV-RESTENCTINGYEIPAKTRVFINVWSIGRDPKHW-EAPLEFR  388 (490)
Q Consensus       311 ~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~-R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~  388 (490)
                      +.++++.++++++++|||++|||+|++|++|++|... |.+.+|++++||.|||||.|.++++++||||++| +||++||
T Consensus       332 ~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~  411 (499)
T PLN03234        332 VIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFI  411 (499)
T ss_pred             HhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcC
Confidence            9887677899999999999999999999999999875 9999999999999999999999999999999999 8999999


Q ss_pred             CCccccCCCCccccccCCccceecCCCCCCCCCchHHHHHHHHHHHHHHHhhceeeecCC-CCccccCcCCCCccccCCC
Q 043803          389 PERFIAEDGKSQLAVRGKHYHYIPFGSGRRACPGISLALHMVHSTLAAMIQCFDWKVNGG-DGATVDMEEAPGLTLPRAH  467 (490)
Q Consensus       389 P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~  467 (490)
                      ||||+++.+..  ..+..+..++|||+|+|+|+|+++|++|+++++|+|+++|+|+++++ ++..+......++...++.
T Consensus       412 PeR~l~~~~~~--~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  489 (499)
T PLN03234        412 PERFMKEHKGV--DFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKE  489 (499)
T ss_pred             chhhcCCCCCc--CcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccccccccCC
Confidence            99999753211  11234678999999999999999999999999999999999999876 2333444456677777888


Q ss_pred             Cceeecccc
Q 043803          468 PLICVPAAR  476 (490)
Q Consensus       468 ~~~~~~~~r  476 (490)
                      ++.+.+++|
T Consensus       490 ~~~~~~~~~  498 (499)
T PLN03234        490 HLVLAPTKH  498 (499)
T ss_pred             CeEEEeecC
Confidence            888888876


No 5  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=1.6e-74  Score=574.47  Aligned_cols=472  Identities=37%  Similarity=0.664  Sum_probs=372.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCccc------------------------------ceeEEeCCH
Q 043803            5 SGYIILFLIWLVSMILVRTILGRSKITSNLPPSPLALPIIG------------------------------LSCIVACSP   54 (490)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pPgP~~~PiiG------------------------------~~~vvv~dp   54 (490)
                      +.+-++++++++.++++.++..+.+++.+.||||+++|++|                              .+.|+++||
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~pl~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp   83 (514)
T PLN03112          4 FLLSLLFSVLIFNVLIWRWLNASMRKSLRLPPGPPRWPIVGNLLQLGPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDP   83 (514)
T ss_pred             hHHHHHHHHHHHHHHHHHHccccccCCCCCccCCCCCCeeeeHHhcCCchHHHHHHHHHHhCCeEEEEecCccEEEECCH
Confidence            34444455555556666666677777889999999999999                              589999999


Q ss_pred             HHHHHHHHhccccccCCCccchhhhhccCCceeEeCCCChhHHHhHHHHHhhccchhhhhhhhhHHHHHHHHHHHHHHHH
Q 043803           55 ETAKEILKTHETSFCDRPISATVDYLTYGSADFAFAPYGPHWKFMKKICMTQLLGGQTLNQFIPIRSEEIKRFMQLMLKK  134 (490)
Q Consensus        55 ~~i~~il~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~  134 (490)
                      +++++|+.++.+.|++++.........++....++..+|+.|+.+||.+..++|+.++++.+.+.+.++++.+++.+.+.
T Consensus        84 e~~~~vl~~~~~~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~  163 (514)
T PLN03112         84 ELIREILLRQDDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEA  163 (514)
T ss_pred             HHHHHHHHhCCcccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence            99999998887788877654222222223224567778999999999976789999999999999999999999988765


Q ss_pred             hcCCCceehHHHHHHHHHHHHHHHHhccccCCCh----hhHHHHHHHHHHHHHhhccccccccccccccccccchHHHHH
Q 043803          135 AKASEAVDVGRELIRLTNNVMPRMTMGQICSNNE----EEADEVMNLVLSIFELSGKFNLADCIWFCKNLDLQGFGKKMK  210 (490)
Q Consensus       135 ~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~  210 (490)
                      ..+++++|+.+++..+++++++.++||.++...+    +....+.+.+..++.......+...+|.++++......++..
T Consensus       164 ~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  243 (514)
T PLN03112        164 AQTGKPVNLREVLGAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMR  243 (514)
T ss_pred             hccCCeeeHHHHHHHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHH
Confidence            5557789999999999999999999999874321    233456666666655443334445567665543334456677


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhccccchHHHHHHH
Q 043803          211 EARKRFDTMMERIIKEHEETRKTNKETGRDDAPNDLLDILLTVSEDESSEIKLTRENVKAFFMNIFSGGTDTSAITTEWA  290 (490)
Q Consensus       211 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~l~~~~~~~l~Ag~dTt~~~l~~~  290 (490)
                      +..+.+.+++...++++++..+....   .....|+++.|+++..+ ++...++++++.++++++++||+|||+++|+|+
T Consensus       244 ~~~~~~~~~~~~~i~~~~~~~~~~~~---~~~~~d~l~~ll~~~~~-~~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~  319 (514)
T PLN03112        244 EVEKRVDEFHDKIIDEHRRARSGKLP---GGKDMDFVDVLLSLPGE-NGKEHMDDVEIKALMQDMIAAATDTSAVTNEWA  319 (514)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccccc---CCccchHHHHHHHhhcc-ccccCCCHHHHHHHHHHHhccccccHHHHHHHH
Confidence            78888888999998887664322110   01356999999986432 222358999999999999999999999999999


Q ss_pred             HHHHHhChHHHHHHHHHHhHhhCCCCccCccccCCChhHHHHHHhhccCCCCCCCcc-cccccceeecCEEeCCCCEEEe
Q 043803          291 LAELINHLDIMNKAKEEIDVVAGKNRLVEESDIANFPYLQALVKETLRLHPAGPMSV-RESTENCTINGYEIPAKTRVFI  369 (490)
Q Consensus       291 l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~-R~~~~~~~l~g~~ip~G~~v~~  369 (490)
                      +++|++||++|++|++|++++++.++.++++++++||||+|||+|++|++|++|... |.+.+|++++||.|||||.|.+
T Consensus       320 l~~L~~~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~  399 (514)
T PLN03112        320 MAEVIKNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFI  399 (514)
T ss_pred             HHHHHhChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEE
Confidence            999999999999999999999887777999999999999999999999999999865 9999999999999999999999


Q ss_pred             ehhhccCCCCCCCCCCCCCCCccccCCCCccccccCCccceecCCCCCCCCCchHHHHHHHHHHHHHHHhhceeeecCCC
Q 043803          370 NVWSIGRDPKHWEAPLEFRPERFIAEDGKSQLAVRGKHYHYIPFGSGRRACPGISLALHMVHSTLAAMIQCFDWKVNGGD  449 (490)
Q Consensus       370 ~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~  449 (490)
                      +.+++||||++|+||++|+||||..+.+............|+|||.|+|+|+|++||++|+++++++||++|+|+++++.
T Consensus       400 ~~~~~h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~  479 (514)
T PLN03112        400 NTHGLGRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGL  479 (514)
T ss_pred             ehHHhhCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCC
Confidence            99999999999999999999998754211111011234689999999999999999999999999999999999987542


Q ss_pred             -CccccCcCCCCccccCCCCceeeccccCCCc
Q 043803          450 -GATVDMEEAPGLTLPRAHPLICVPAARLNPF  480 (490)
Q Consensus       450 -~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~  480 (490)
                       ..+.......++..++.+++.+.+++|...+
T Consensus       480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~  511 (514)
T PLN03112        480 RPEDIDTQEVYGMTMPKAKPLRAVATPRLAPH  511 (514)
T ss_pred             CcccCCCccccCcccccCCCeEEEeecCCccc
Confidence             2234444455677777889999999997544


No 6  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=2.5e-74  Score=572.05  Aligned_cols=442  Identities=40%  Similarity=0.785  Sum_probs=355.3

Q ss_pred             CCCCCCCCCCCCCccc------------------------------ceeEEeCCHHHHHHHHHhccccccCCCccchhhh
Q 043803           30 ITSNLPPSPLALPIIG------------------------------LSCIVACSPETAKEILKTHETSFCDRPISATVDY   79 (490)
Q Consensus        30 ~~~~~pPgP~~~PiiG------------------------------~~~vvv~dp~~i~~il~~~~~~f~~~~~~~~~~~   79 (490)
                      ++.++||||+++|++|                              .++|+++||+++++++.++...|.+++.......
T Consensus        31 ~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~~  110 (517)
T PLN02687         31 HKRPLPPGPRGWPVLGNLPQLGPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAEH  110 (517)
T ss_pred             CCCCCCccCCCCCccccHHhcCCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchhh
Confidence            4457899999999999                              5899999999999999988778888765443333


Q ss_pred             hccCCceeEeCCCChhHHHhHHHHHhhccchhhhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHHHHHHH
Q 043803           80 LTYGSADFAFAPYGPHWKFMKKICMTQLLGGQTLNQFIPIRSEEIKRFMQLMLKKAKASEAVDVGRELIRLTNNVMPRMT  159 (490)
Q Consensus        80 ~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~  159 (490)
                      +...+.+.+++.+|+.|+++||.+..++|+.++++.+.+.++++++++++.+.+. .+++++|+.+++..+++|+++.++
T Consensus       111 ~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-~~~~~vd~~~~~~~~t~dvi~~~~  189 (517)
T PLN02687        111 MAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQ-HGTAPVNLGQLVNVCTTNALGRAM  189 (517)
T ss_pred             hccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHh-cCCCceeHHHHHHHHHHHHHHHHH
Confidence            3333336677788999999999985488999999999999999999999999764 245789999999999999999999


Q ss_pred             hccccCCCh--hhHHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhccccC
Q 043803          160 MGQICSNNE--EEADEVMNLVLSIFELSGKFNLADCIWFCKNLDLQGFGKKMKEARKRFDTMMERIIKEHEETRKTNKET  237 (490)
Q Consensus       160 fG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  237 (490)
                      ||.++...+  +....+.+.+...+...+.......+|+++++......++..+..+.+.+++.+.++++++.....+  
T Consensus       190 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~--  267 (517)
T PLN02687        190 VGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAGQTGS--  267 (517)
T ss_pred             hCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhccccC--
Confidence            999875322  2335566666666654443333345666555433333456666778888889999988876533211  


Q ss_pred             CCCCCCCcHHHHHHhhcccc---cccccCCHHHHHHHHHHHhhccccchHHHHHHHHHHHHhChHHHHHHHHHHhHhhCC
Q 043803          238 GRDDAPNDLLDILLTVSEDE---SSEIKLTRENVKAFFMNIFSGGTDTSAITTEWALAELINHLDIMNKAKEEIDVVAGK  314 (490)
Q Consensus       238 ~~~~~~~d~l~~ll~~~~~~---~~~~~l~~~~l~~~~~~~l~Ag~dTt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~  314 (490)
                         ....|+++.|++...+.   .++..++++++.+++.++++||+|||+++++|++|+|++||++|+|+++|++++.+.
T Consensus       268 ---~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~  344 (517)
T PLN02687        268 ---EEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGR  344 (517)
T ss_pred             ---cccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCC
Confidence               14579999999864321   123459999999999999999999999999999999999999999999999999887


Q ss_pred             CCccCccccCCChhHHHHHHhhccCCCCCCCcc-cccccceeecCEEeCCCCEEEeehhhccCCCCCCCCCCCCCCCccc
Q 043803          315 NRLVEESDIANFPYLQALVKETLRLHPAGPMSV-RESTENCTINGYEIPAKTRVFINVWSIGRDPKHWEAPLEFRPERFI  393 (490)
Q Consensus       315 ~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~-R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l  393 (490)
                      ++.++.+++++||||+|||+|+||++|+++... |.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||+
T Consensus       345 ~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl  424 (517)
T PLN02687        345 DRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFL  424 (517)
T ss_pred             CCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcC
Confidence            778899999999999999999999999999864 9999999999999999999999999999999999999999999999


Q ss_pred             cCCCCccccccCCccceecCCCCCCCCCchHHHHHHHHHHHHHHHhhceeeecCCC-CccccCcCCCCccccCCCCceee
Q 043803          394 AEDGKSQLAVRGKHYHYIPFGSGRRACPGISLALHMVHSTLAAMIQCFDWKVNGGD-GATVDMEEAPGLTLPRAHPLICV  472 (490)
Q Consensus       394 ~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  472 (490)
                      +.+..........+..|+|||.|+|+|+|++||.+|+++++++||++|+|++.++. ..+.......++++.+..++.++
T Consensus       425 ~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  504 (517)
T PLN02687        425 PGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLMVH  504 (517)
T ss_pred             CCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccceeeecCCCeEEe
Confidence            75321111112245689999999999999999999999999999999999987652 12233334456666667789999


Q ss_pred             ccccC
Q 043803          473 PAARL  477 (490)
Q Consensus       473 ~~~r~  477 (490)
                      +++|.
T Consensus       505 ~~~R~  509 (517)
T PLN02687        505 PRPRL  509 (517)
T ss_pred             eccCC
Confidence            99884


No 7  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=2.1e-74  Score=569.01  Aligned_cols=461  Identities=37%  Similarity=0.717  Sum_probs=363.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhccC--CCCCCCCCCCCCCCccc------------------------------ceeEEeCCH
Q 043803            7 YIILFLIWLVSMILVRTILGRS--KITSNLPPSPLALPIIG------------------------------LSCIVACSP   54 (490)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~pPgP~~~PiiG------------------------------~~~vvv~dp   54 (490)
                      +++-+++..++.++++.+.++.  ..+.++||||+++|++|                              ++.|+++||
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pPgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp   82 (504)
T PLN00110          3 LLLELAAATLLFFITRFFIRSLLPKPSRKLPPGPRGWPLLGALPLLGNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTP   82 (504)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcccCCCcccCCCCCeeechhhcCCchHHHHHHHHHHhCCeEEEEcCCccEEEECCH
Confidence            3444444444444444443332  34557899999999999                              688999999


Q ss_pred             HHHHHHHHhccccccCCCccchhhhhccCCceeEeCCCChhHHHhHHHHHhhccchhhhhhhhhHHHHHHHHHHHHHHHH
Q 043803           55 ETAKEILKTHETSFCDRPISATVDYLTYGSADFAFAPYGPHWKFMKKICMTQLLGGQTLNQFIPIRSEEIKRFMQLMLKK  134 (490)
Q Consensus        55 ~~i~~il~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~  134 (490)
                      +++++++.++...|.+++..........++.+++++.+|+.|+++||.+..+.|+++.++.+.+.+.++++.+++.+.+.
T Consensus        83 e~~~~vl~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~  162 (504)
T PLN00110         83 EAARAFLKTLDINFSNRPPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLEL  162 (504)
T ss_pred             HHHHHHHHhcchhhcCCCCccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence            99999999887788887754332222233335677888999999999986568999999999999999999999999876


Q ss_pred             hcCCCceehHHHHHHHHHHHHHHHHhcccc-CCChhhHHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHH
Q 043803          135 AKASEAVDVGRELIRLTNNVMPRMTMGQIC-SNNEEEADEVMNLVLSIFELSGKFNLADCIWFCKNLDLQGFGKKMKEAR  213 (490)
Q Consensus       135 ~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~  213 (490)
                      ..+|+++|+.+++..+++|+++.++||.++ +.......++.+.+...+.......+...+|++.++......++..+..
T Consensus       163 ~~~g~~~~~~~~~~~~~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~  242 (504)
T PLN00110        163 SQRGEPVVVPEMLTFSMANMIGQVILSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLH  242 (504)
T ss_pred             ccCCCcEeHHHHHHHHHHHHHHHHHhCCcccccCchhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHH
Confidence            556789999999999999999999999976 2222233556666666655444333445566665543333445666677


Q ss_pred             HHHHHHHHHHHHHHHHhhhccccCCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhccccchHHHHHHHHHH
Q 043803          214 KRFDTMMERIIKEHEETRKTNKETGRDDAPNDLLDILLTVSEDESSEIKLTRENVKAFFMNIFSGGTDTSAITTEWALAE  293 (490)
Q Consensus       214 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~l~~~~~~~l~Ag~dTt~~~l~~~l~~  293 (490)
                      +.+.+++.+.++++++.....      ..+.|+++.|++...+ .++..++++++.++++++++||+|||+++++|++++
T Consensus       243 ~~~~~~~~~~i~~~~~~~~~~------~~~~d~l~~ll~~~~~-~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~  315 (504)
T PLN00110        243 KKFDKLLTRMIEEHTASAHER------KGNPDFLDVVMANQEN-STGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAE  315 (504)
T ss_pred             HHHHHHHHHHHHHHHhhcccc------ccCCChhhHHhhcccc-cCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHH
Confidence            888888888887776543211      1346899999976322 223469999999999999999999999999999999


Q ss_pred             HHhChHHHHHHHHHHhHhhCCCCccCccccCCChhHHHHHHhhccCCCCCCCcc-cccccceeecCEEeCCCCEEEeehh
Q 043803          294 LINHLDIMNKAKEEIDVVAGKNRLVEESDIANFPYLQALVKETLRLHPAGPMSV-RESTENCTINGYEIPAKTRVFINVW  372 (490)
Q Consensus       294 L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~-R~~~~~~~l~g~~ip~G~~v~~~~~  372 (490)
                      |++||++|+|+++|++++++.++.++++++++||||+|||+|+||++|++|... |.+.+|++++||.|||||.|.++.+
T Consensus       316 L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~  395 (504)
T PLN00110        316 MLKNPSILKRAHEEMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIW  395 (504)
T ss_pred             HHhCHHHHHHHHHHHHHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHH
Confidence            999999999999999999887677899999999999999999999999999854 9999999999999999999999999


Q ss_pred             hccCCCCCCCCCCCCCCCccccCCCCccccccCCccceecCCCCCCCCCchHHHHHHHHHHHHHHHhhceeeecCCCCcc
Q 043803          373 SIGRDPKHWEAPLEFRPERFIAEDGKSQLAVRGKHYHYIPFGSGRRACPGISLALHMVHSTLAAMIQCFDWKVNGGDGAT  452 (490)
Q Consensus       373 ~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~  452 (490)
                      ++|+||++|+||++|+||||++.+... ...+.....++|||.|+|.|+|++||.+|+++++++|+++|++++.++  .+
T Consensus       396 ~~h~d~~~~~dP~~F~PeRfl~~~~~~-~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~--~~  472 (504)
T PLN00110        396 AIGRDPDVWENPEEFRPERFLSEKNAK-IDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDG--VE  472 (504)
T ss_pred             HhcCChhhcCCcccCCcccccCCCCcc-cccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCC--Cc
Confidence            999999999999999999999643111 011112357999999999999999999999999999999999998765  23


Q ss_pred             ccCcCCCCccccCCCCceeeccccC
Q 043803          453 VDMEEAPGLTLPRAHPLICVPAARL  477 (490)
Q Consensus       453 ~~~~~~~~~~~~~~~~~~~~~~~r~  477 (490)
                      .......++++.++.++.+++++|.
T Consensus       473 ~~~~~~~~~~~~~~~~~~~~~~~r~  497 (504)
T PLN00110        473 LNMDEAFGLALQKAVPLSAMVTPRL  497 (504)
T ss_pred             cCcccccccccccCCCceEeeccCC
Confidence            3333345677778889999999995


No 8  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=3.1e-74  Score=571.15  Aligned_cols=443  Identities=38%  Similarity=0.744  Sum_probs=348.9

Q ss_pred             ccCCCCCCCCCCCCCCCccc------------------------------ceeEEeCCHHHHHHHHHhccccccCCCccc
Q 043803           26 GRSKITSNLPPSPLALPIIG------------------------------LSCIVACSPETAKEILKTHETSFCDRPISA   75 (490)
Q Consensus        26 ~~~~~~~~~pPgP~~~PiiG------------------------------~~~vvv~dp~~i~~il~~~~~~f~~~~~~~   75 (490)
                      .+..++.++||||+++|++|                              .+.|+++||+++++|+.++...|+.++...
T Consensus        29 ~~~~~~~~~ppgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~  108 (516)
T PLN02183         29 SRLRRRLPYPPGPKGLPIIGNMLMMDQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANI  108 (516)
T ss_pred             hhccCCCCCCcCCCCCCeeccHHhcCCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCccc
Confidence            33444568999999999999                              688999999999999998877887776543


Q ss_pred             hhhhhccCCceeEeCCCChhHHHhHHHHHhhccchhhhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHHH
Q 043803           76 TVDYLTYGSADFAFAPYGPHWKFMKKICMTQLLGGQTLNQFIPIRSEEIKRFMQLMLKKAKASEAVDVGRELIRLTNNVM  155 (490)
Q Consensus        76 ~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi  155 (490)
                      .......++.++++..+|+.|+++||.+..++|+.+.++.+.+. .++++.+++.+..  ..|+++|+.+++..++++++
T Consensus       109 ~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~-~~~~~~~~~~l~~--~~~~~v~~~~~~~~~~~~vi  185 (516)
T PLN02183        109 AISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASV-RDEVDSMVRSVSS--NIGKPVNIGELIFTLTRNIT  185 (516)
T ss_pred             chhccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHHHHHHHh--cCCCcEeHHHHHHHHHHHHH
Confidence            33333222235677788999999999965789999999888886 5688999999865  34778999999999999999


Q ss_pred             HHHHhccccCCChhhHHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 043803          156 PRMTMGQICSNNEEEADEVMNLVLSIFELSGKFNLADCIWFCKNLDLQGFGKKMKEARKRFDTMMERIIKEHEETRKTNK  235 (490)
Q Consensus       156 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  235 (490)
                      ++++||..++..+   .++.+.+..+............+|+++++......++..+..+.+.+++.+.++++.++....+
T Consensus       186 ~~~~fG~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  262 (516)
T PLN02183        186 YRAAFGSSSNEGQ---DEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQN  262 (516)
T ss_pred             HhHhhcCcccchH---HHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence            9999998765422   3455555555444433344456666655422334566777788888888888887765433211


Q ss_pred             cC-CCCCCCCcHHHHHHhhccccc---------ccccCCHHHHHHHHHHHhhccccchHHHHHHHHHHHHhChHHHHHHH
Q 043803          236 ET-GRDDAPNDLLDILLTVSEDES---------SEIKLTRENVKAFFMNIFSGGTDTSAITTEWALAELINHLDIMNKAK  305 (490)
Q Consensus       236 ~~-~~~~~~~d~l~~ll~~~~~~~---------~~~~l~~~~l~~~~~~~l~Ag~dTt~~~l~~~l~~L~~~p~~q~~l~  305 (490)
                      .. .......|+++.|+++..++.         +...++++++.+++.++++||+|||+.+++|++|+|++||++|+|++
T Consensus       263 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~  342 (516)
T PLN02183        263 ADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQ  342 (516)
T ss_pred             cccccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHH
Confidence            00 001134689999998643211         12258999999999999999999999999999999999999999999


Q ss_pred             HHHhHhhCCCCccCccccCCChhHHHHHHhhccCCCCCCCcccccccceeecCEEeCCCCEEEeehhhccCCCCCCCCCC
Q 043803          306 EEIDVVAGKNRLVEESDIANFPYLQALVKETLRLHPAGPMSVRESTENCTINGYEIPAKTRVFINVWSIGRDPKHWEAPL  385 (490)
Q Consensus       306 ~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~  385 (490)
                      +|++++++.++.++++++++||||+|||+|+||++|++|+..|.+.+|++++||.|||||.|.++.+++||||++|+||+
T Consensus       343 ~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~  422 (516)
T PLN02183        343 QELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPD  422 (516)
T ss_pred             HHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccceeeeccCceeECCEEECCCCEEEEehhhhcCCccccCCcc
Confidence            99999988666789999999999999999999999999998899999999999999999999999999999999999999


Q ss_pred             CCCCCccccCCCCccccccCCccceecCCCCCCCCCchHHHHHHHHHHHHHHHhhceeeecCCCC-ccccCcCCCCcccc
Q 043803          386 EFRPERFIAEDGKSQLAVRGKHYHYIPFGSGRRACPGISLALHMVHSTLAAMIQCFDWKVNGGDG-ATVDMEEAPGLTLP  464 (490)
Q Consensus       386 ~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~  464 (490)
                      +|+||||++++.   .......+.|+|||.|+|+|+|++||++|+++++|+|+++|+++..++.. ........++.+.+
T Consensus       423 ~F~PeRfl~~~~---~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  499 (516)
T PLN02183        423 TFKPSRFLKPGV---PDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGLTAP  499 (516)
T ss_pred             ccCchhhCCCCC---ccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhccccccc
Confidence            999999997531   11112456899999999999999999999999999999999999877522 12333334455555


Q ss_pred             CCCCceeeccccC
Q 043803          465 RAHPLICVPAARL  477 (490)
Q Consensus       465 ~~~~~~~~~~~r~  477 (490)
                      +..++.+.+++|.
T Consensus       500 ~~~~~~~~~~~r~  512 (516)
T PLN02183        500 RATRLVAVPTYRL  512 (516)
T ss_pred             cCCCcEEEeecCC
Confidence            6678888888873


No 9  
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=3.4e-73  Score=564.14  Aligned_cols=472  Identities=24%  Similarity=0.419  Sum_probs=354.7

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHh---ccCCCCCCCCCCCCCCCccc---------------------------------c
Q 043803            3 DFSGYIILFLIWLVSMILVRTIL---GRSKITSNLPPSPLALPIIG---------------------------------L   46 (490)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~pPgP~~~PiiG---------------------------------~   46 (490)
                      +++.++.+.+++++.++++.++.   ...+...++||||+++|++|                                 .
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~   81 (519)
T PLN00168          2 DATQLLLLAALLLLPLLLLLLGKHGGRGGKKGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSR   81 (519)
T ss_pred             cHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCc
Confidence            44445444444444444444442   22244667999999999999                                 6


Q ss_pred             eeEEeCCHHHHHHHHHhccccccCCCccchhhhhccCCceeEeCCCChhHHHhHHHHHhhccchhhhhhhhhHHHHHHHH
Q 043803           47 SCIVACSPETAKEILKTHETSFCDRPISATVDYLTYGSADFAFAPYGPHWKFMKKICMTQLLGGQTLNQFIPIRSEEIKR  126 (490)
Q Consensus        47 ~~vvv~dp~~i~~il~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~  126 (490)
                      +.|+++||+++++++.++...|+.++.......+..++..+.+..+|+.|+++||.+.+++|+.++++.+.+.+.++++.
T Consensus        82 ~~vvv~dpe~~~~il~~~~~~f~~rp~~~~~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~  161 (519)
T PLN00168         82 LSVFVADRRLAHAALVERGAALADRPAVASSRLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRV  161 (519)
T ss_pred             cEEEECCHHHHHHHHHhcCCccccCCcccchhhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Confidence            88999999999999998888888776543333333222122223689999999986668999999999999999999999


Q ss_pred             HHHHHHHHhcCCCceehHHHHHHHHHHHHHHHHhccccCCChhhHHHHHHHHHHHHHhh-ccccccccccccccccccch
Q 043803          127 FMQLMLKKAKASEAVDVGRELIRLTNNVMPRMTMGQICSNNEEEADEVMNLVLSIFELS-GKFNLADCIWFCKNLDLQGF  205 (490)
Q Consensus       127 l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~l~~l~~~~~  205 (490)
                      +++.+.+....++++|+.+.+..+++++++.++||.+++..  ....+........... ....+...+|.+.+......
T Consensus       162 l~~~l~~~~~~~~~v~~~~~~~~~~~~ii~~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~  239 (519)
T PLN00168        162 LVDKLRREAEDAAAPRVVETFQYAMFCLLVLMCFGERLDEP--AVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGR  239 (519)
T ss_pred             HHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHcCCCcChh--hHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhH
Confidence            99999876555567999999999999999999999987632  1222323333222212 12233445565432212223


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhcc-ccC-CCC---CCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhccc
Q 043803          206 GKKMKEARKRFDTMMERIIKEHEETRKTN-KET-GRD---DAPNDLLDILLTVSEDESSEIKLTRENVKAFFMNIFSGGT  280 (490)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~-~~~---~~~~d~l~~ll~~~~~~~~~~~l~~~~l~~~~~~~l~Ag~  280 (490)
                      .++..+..+.+.+++..+++++++..... +.. ...   ....|+++.|++....+.++..+++++++++++++++||+
T Consensus       240 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~  319 (519)
T PLN00168        240 LQKALALRRRQKELFVPLIDARREYKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGT  319 (519)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcc
Confidence            45556678888999999998877643210 000 000   1246899999976432222346999999999999999999


Q ss_pred             cchHHHHHHHHHHHHhChHHHHHHHHHHhHhhCCC-CccCccccCCChhHHHHHHhhccCCCCCCCcc-cccccceeecC
Q 043803          281 DTSAITTEWALAELINHLDIMNKAKEEIDVVAGKN-RLVEESDIANFPYLQALVKETLRLHPAGPMSV-RESTENCTING  358 (490)
Q Consensus       281 dTt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~-~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~-R~~~~~~~l~g  358 (490)
                      |||+++++|++++|++||++|+|+++||+++++++ +.++++++.+||||+|||+|++|++|+++... |.+.+|++++|
T Consensus       320 dTTa~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g  399 (519)
T PLN00168        320 DTTSTALQWIMAELVKNPSIQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGG  399 (519)
T ss_pred             hHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCC
Confidence            99999999999999999999999999999998753 56899999999999999999999999999875 99999999999


Q ss_pred             EEeCCCCEEEeehhhccCCCCCCCCCCCCCCCccccCCCCcccc-ccCCccceecCCCCCCCCCchHHHHHHHHHHHHHH
Q 043803          359 YEIPAKTRVFINVWSIGRDPKHWEAPLEFRPERFIAEDGKSQLA-VRGKHYHYIPFGSGRRACPGISLALHMVHSTLAAM  437 (490)
Q Consensus       359 ~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~-~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~l  437 (490)
                      |.|||||.|.++.+++||||++||||++|+||||++.+.....+ ....++.|+|||.|+|+|+|++||.+|+++++++|
T Consensus       400 ~~IpkGt~v~~~~~~~~~d~~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~l  479 (519)
T PLN00168        400 YLIPKGATVNFMVAEMGRDEREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANM  479 (519)
T ss_pred             EEECCCCEEEEChHHHhcCccccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999742111111 11234689999999999999999999999999999


Q ss_pred             HhhceeeecCCCCccccCcCCCCccccCCCCceeeccccCC
Q 043803          438 IQCFDWKVNGGDGATVDMEEAPGLTLPRAHPLICVPAARLN  478 (490)
Q Consensus       438 l~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  478 (490)
                      |++|+|++++++  +.+.....+.+..++.++.|++++|+.
T Consensus       480 l~~f~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~R~~  518 (519)
T PLN00168        480 VREFEWKEVPGD--EVDFAEKREFTTVMAKPLRARLVPRRT  518 (519)
T ss_pred             HHHccceeCCCC--cCChhhhceeEEeecCCcEEEEEeccC
Confidence            999999997652  233333334555667789999998875


No 10 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=7.2e-73  Score=560.03  Aligned_cols=438  Identities=33%  Similarity=0.643  Sum_probs=338.4

Q ss_pred             cCCCCCCCCCCCCCCCccc-------------------------------ceeEEeCCHHHHHHHHHhccccccCCCccc
Q 043803           27 RSKITSNLPPSPLALPIIG-------------------------------LSCIVACSPETAKEILKTHETSFCDRPISA   75 (490)
Q Consensus        27 ~~~~~~~~pPgP~~~PiiG-------------------------------~~~vvv~dp~~i~~il~~~~~~f~~~~~~~   75 (490)
                      ..+...++||||+++|++|                               .+.|+++||+++++|+.++...|.+++...
T Consensus        23 ~~~~~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~  102 (502)
T PLN02966         23 PKTKRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHR  102 (502)
T ss_pred             cccCCCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCc
Confidence            3345568899999999999                               578999999999999998776776655332


Q ss_pred             hhhhhccCCceeEeCCCChhHHHhHHHHHhhccchhhhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHHH
Q 043803           76 TVDYLTYGSADFAFAPYGPHWKFMKKICMTQLLGGQTLNQFIPIRSEEIKRFMQLMLKKAKASEAVDVGRELIRLTNNVM  155 (490)
Q Consensus        76 ~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi  155 (490)
                      .......+.....+..+|+.|+.+|+.+..++|++.++..+.+.++++++++++.|.+.+..++++|+.++++.+++|++
T Consensus       103 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~dvi  182 (502)
T PLN02966        103 GHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVV  182 (502)
T ss_pred             cceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHHH
Confidence            22222233323445667999999999965799999999999999999999999999876556778999999999999999


Q ss_pred             HHHHhccccCCChhhHHHHHHHHHHHHHhhcccccccccccccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 043803          156 PRMTMGQICSNNEEEADEVMNLVLSIFELSGKFNLADCIWFCKNLD-LQGFGKKMKEARKRFDTMMERIIKEHEETRKTN  234 (490)
Q Consensus       156 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  234 (490)
                      +.++||.+++..++....+.+.+...........+...+|++.++. .....+......+.+.+++.+.+++..+.....
T Consensus       183 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  262 (502)
T PLN02966        183 CRQAFGKKYNEDGEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPKRVK  262 (502)
T ss_pred             HHHHhCCccCccchHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence            9999999887654444556665555544444333444455433221 112223334455666677777776654321111


Q ss_pred             ccCCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhccccchHHHHHHHHHHHHhChHHHHHHHHHHhHhhCC
Q 043803          235 KETGRDDAPNDLLDILLTVSEDESSEIKLTRENVKAFFMNIFSGGTDTSAITTEWALAELINHLDIMNKAKEEIDVVAGK  314 (490)
Q Consensus       235 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~l~~~~~~~l~Ag~dTt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~  314 (490)
                            .+..|+++.|++..++......++++++.++++++++||+|||+.+|+|++|+|++||++|+|+++|++++++.
T Consensus       263 ------~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~  336 (502)
T PLN02966        263 ------PETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKE  336 (502)
T ss_pred             ------cccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcc
Confidence                  13468999999765432222358999999999999999999999999999999999999999999999999874


Q ss_pred             C--CccCccccCCChhHHHHHHhhccCCCCCCCcc-cccccceeecCEEeCCCCEEEeehhhccCCCCCC-CCCCCCCCC
Q 043803          315 N--RLVEESDIANFPYLQALVKETLRLHPAGPMSV-RESTENCTINGYEIPAKTRVFINVWSIGRDPKHW-EAPLEFRPE  390 (490)
Q Consensus       315 ~--~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~-R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~  390 (490)
                      +  +.++++++++||||+|||+|+||++|++|+.. |.+.+|++++||.|||||.|.++++++||||++| |||++|+||
T Consensus       337 ~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~Pe  416 (502)
T PLN02966        337 KGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPE  416 (502)
T ss_pred             cCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCChh
Confidence            2  35799999999999999999999999999865 9999999999999999999999999999999999 999999999


Q ss_pred             ccccCCCCccccccCCccceecCCCCCCCCCchHHHHHHHHHHHHHHHhhceeeecCCC-CccccCcCCCCccccCCCCc
Q 043803          391 RFIAEDGKSQLAVRGKHYHYIPFGSGRRACPGISLALHMVHSTLAAMIQCFDWKVNGGD-GATVDMEEAPGLTLPRAHPL  469 (490)
Q Consensus       391 R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  469 (490)
                      ||++.+.  .  ....+..|+|||.|+|+|+|++||++|+++++|+||++|+|++.++. ...++.....++...++.++
T Consensus       417 Rwl~~~~--~--~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  492 (502)
T PLN02966        417 RFLEKEV--D--FKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMHKSQHL  492 (502)
T ss_pred             hhcCCCC--C--cCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCeeeccCCCe
Confidence            9996431  1  11245689999999999999999999999999999999999987762 22233334445555444466


Q ss_pred             eeecc
Q 043803          470 ICVPA  474 (490)
Q Consensus       470 ~~~~~  474 (490)
                      .++.+
T Consensus       493 ~~~~~  497 (502)
T PLN02966        493 KLVPE  497 (502)
T ss_pred             EEEEE
Confidence            54443


No 11 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=7.9e-72  Score=554.19  Aligned_cols=442  Identities=31%  Similarity=0.528  Sum_probs=335.1

Q ss_pred             ccCCCCCCCCCCCCCCCccc-------------------------------ceeEEeCCHHHHHHHHHhccccccCCCcc
Q 043803           26 GRSKITSNLPPSPLALPIIG-------------------------------LSCIVACSPETAKEILKTHETSFCDRPIS   74 (490)
Q Consensus        26 ~~~~~~~~~pPgP~~~PiiG-------------------------------~~~vvv~dp~~i~~il~~~~~~f~~~~~~   74 (490)
                      +...++.+.||||+++|++|                               ++.|+++||+++++|+.++...|.+++..
T Consensus        23 ~~~~~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~  102 (503)
T PLN02394         23 KLRGKKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRN  102 (503)
T ss_pred             HHhcCcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCc
Confidence            33456678999999999999                               57899999999999998877778776554


Q ss_pred             chhhhhccCCceeEeCCCChhHHHhHHHHHhhccchhhhhhhhhHHHHHHHHHHHHHHHHhc-CCCceehHHHHHHHHHH
Q 043803           75 ATVDYLTYGSADFAFAPYGPHWKFMKKICMTQLLGGQTLNQFIPIRSEEIKRFMQLMLKKAK-ASEAVDVGRELIRLTNN  153 (490)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~-~~~~vdl~~~~~~~~~~  153 (490)
                      .....+...+.+.++..+|+.|+++||.+..++|++++++.+.+.++++++++++.+.+... .++.+++.+.++.+++|
T Consensus       103 ~~~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~d  182 (503)
T PLN02394        103 VVFDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYN  182 (503)
T ss_pred             chHhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHH
Confidence            43343333333567778899999999998569999999999999999999999999976532 24569999999999999


Q ss_pred             HHHHHHhccccCCChh-hHHHHHHHHHHHHHhhcc--ccccccccccccccccchHHHHHHHHHHHHH-HHHHHHHHHHH
Q 043803          154 VMPRMTMGQICSNNEE-EADEVMNLVLSIFELSGK--FNLADCIWFCKNLDLQGFGKKMKEARKRFDT-MMERIIKEHEE  229 (490)
Q Consensus       154 vi~~~~fG~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~  229 (490)
                      ++++++||.+++..++ ....+.............  ..+...+|++.+. .....+...+....... +....++++++
T Consensus       183 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  261 (503)
T PLN02394        183 IMYRMMFDRRFESEDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPF-LRGYLKICQDVKERRLALFKDYFVDERKK  261 (503)
T ss_pred             HHHHHHhCCCcccccchhHHHHHHHHHHHHHHhcccccchhhhchHHHHH-hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999998875432 222222222222222211  1222334443321 11122222222222222 23334555544


Q ss_pred             hhhccccCCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhccccchHHHHHHHHHHHHhChHHHHHHHHHHh
Q 043803          230 TRKTNKETGRDDAPNDLLDILLTVSEDESSEIKLTRENVKAFFMNIFSGGTDTSAITTEWALAELINHLDIMNKAKEEID  309 (490)
Q Consensus       230 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~l~~~~~~~l~Ag~dTt~~~l~~~l~~L~~~p~~q~~l~~Ei~  309 (490)
                      ..+..+.  ......|+++.|+++..+    ..++++++..++.++++||+|||+++|+|++|+|++||++|+||++|++
T Consensus       262 ~~~~~~~--~~~~~~d~l~~ll~~~~~----~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~  335 (503)
T PLN02394        262 LMSAKGM--DKEGLKCAIDHILEAQKK----GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELD  335 (503)
T ss_pred             HhhhccC--CcchhhhHHHHHHhcccc----CCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence            3221100  001356899999987432    2489999999999999999999999999999999999999999999999


Q ss_pred             HhhCCCCccCccccCCChhHHHHHHhhccCCCCCCCcc-cccccceeecCEEeCCCCEEEeehhhccCCCCCCCCCCCCC
Q 043803          310 VVAGKNRLVEESDIANFPYLQALVKETLRLHPAGPMSV-RESTENCTINGYEIPAKTRVFINVWSIGRDPKHWEAPLEFR  388 (490)
Q Consensus       310 ~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~-R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~  388 (490)
                      ++++.++.++++++++||||+|||+|+||++|++|+.. |.+.+|++++||.|||||.|.++.+++||||++|+||++|+
T Consensus       336 ~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~  415 (503)
T PLN02394        336 TVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFR  415 (503)
T ss_pred             HHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccC
Confidence            99987667899999999999999999999999999986 88999999999999999999999999999999999999999


Q ss_pred             CCccccCCCCccccccCCccceecCCCCCCCCCchHHHHHHHHHHHHHHHhhceeeecCCCCccccCcCCCC-ccccCCC
Q 043803          389 PERFIAEDGKSQLAVRGKHYHYIPFGSGRRACPGISLALHMVHSTLAAMIQCFDWKVNGGDGATVDMEEAPG-LTLPRAH  467 (490)
Q Consensus       389 P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~-~~~~~~~  467 (490)
                      ||||+++++...  .......|+|||.|+|+|+|++||.+|+++++|+|+++|+|++.++.+ .++.....+ ..+..+.
T Consensus       416 PeRwl~~~~~~~--~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~  492 (503)
T PLN02394        416 PERFLEEEAKVE--ANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQS-KIDVSEKGGQFSLHIAK  492 (503)
T ss_pred             ccccCCCCCccc--ccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCC-cCccccccCceeeccCC
Confidence            999997532111  122456899999999999999999999999999999999999876532 244444443 4444567


Q ss_pred             CceeeccccC
Q 043803          468 PLICVPAARL  477 (490)
Q Consensus       468 ~~~~~~~~r~  477 (490)
                      +++|++.+|+
T Consensus       493 ~~~~~~~~r~  502 (503)
T PLN02394        493 HSTVVFKPRS  502 (503)
T ss_pred             CceEEeecCC
Confidence            9999999986


No 12 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=1.3e-71  Score=549.65  Aligned_cols=425  Identities=26%  Similarity=0.410  Sum_probs=331.8

Q ss_pred             ccCCCCCCCCCCCCCCCccc------------------------------ceeEEeCCHHHHHHHHHhccccccCCCccc
Q 043803           26 GRSKITSNLPPSPLALPIIG------------------------------LSCIVACSPETAKEILKTHETSFCDRPISA   75 (490)
Q Consensus        26 ~~~~~~~~~pPgP~~~PiiG------------------------------~~~vvv~dp~~i~~il~~~~~~f~~~~~~~   75 (490)
                      .+.+...+.+|||+++|++|                              .+.|+++||+++++|+.++.+.|.+++...
T Consensus        22 ~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~  101 (482)
T PTZ00404         22 KYKKIHKNELKGPIPIPILGNLHQLGNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIP  101 (482)
T ss_pred             HhhhccCCCCCCCCCCCeeccHhhhcccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcc
Confidence            33345678899999999999                              588999999999999998766777666543


Q ss_pred             hhhhhccCCceeEeCCCChhHHHhHHHHHhhccchhhhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHHH
Q 043803           76 TVDYLTYGSADFAFAPYGPHWKFMKKICMTQLLGGQTLNQFIPIRSEEIKRFMQLMLKKAKASEAVDVGRELIRLTNNVM  155 (490)
Q Consensus        76 ~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi  155 (490)
                      ....... +.+ ++..+|+.|+++||.+ ++.|+...++.+.+.+.++++.+++.+.+....++++|+..++..+++|++
T Consensus       102 ~~~~~~~-~~~-l~~~~g~~w~~~Rk~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi  178 (482)
T PTZ00404        102 SIKHGTF-YHG-IVTSSGEYWKRNREIV-GKAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAM  178 (482)
T ss_pred             eeeeecc-CCc-eeccChHHHHHHHHHH-HHHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHH
Confidence            2221112 223 5567899999999998 699999999999999999999999999875556778999999999999999


Q ss_pred             HHHHhccccCCCh----hhHHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 043803          156 PRMTMGQICSNNE----EEADEVMNLVLSIFELSGKFNLADCIWFCKNLDLQGFGKKMKEARKRFDTMMERIIKEHEETR  231 (490)
Q Consensus       156 ~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  231 (490)
                      +.++||.+++..+    +....+.+.+..++.......+...++++..+. ........+..+.+.+++.+.++++++..
T Consensus       179 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  257 (482)
T PTZ00404        179 FKYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLY-YQYLEHTDKNFKKIKKFIKEKYHEHLKTI  257 (482)
T ss_pred             HHHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence            9999999876432    122456666666665443333333333322210 01112233455566666666665544321


Q ss_pred             hccccCCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhccccchHHHHHHHHHHHHhChHHHHHHHHHHhHh
Q 043803          232 KTNKETGRDDAPNDLLDILLTVSEDESSEIKLTRENVKAFFMNIFSGGTDTSAITTEWALAELINHLDIMNKAKEEIDVV  311 (490)
Q Consensus       232 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~l~~~~~~~l~Ag~dTt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~  311 (490)
                      .  .     ....|+++.|+++..+.   .....+++++++.++++||+|||+++|+|++|+|++||++|+||++|++++
T Consensus       258 ~--~-----~~~~dll~~ll~~~~~~---~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v  327 (482)
T PTZ00404        258 D--P-----EVPRDLLDLLIKEYGTN---TDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKST  327 (482)
T ss_pred             C--C-----CCcccHHHHHHHHhccC---CcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Confidence            1  1     13569999999864221   112334588999999999999999999999999999999999999999999


Q ss_pred             hCCCCccCccccCCChhHHHHHHhhccCCCCCCCc-ccccccceee-cCEEeCCCCEEEeehhhccCCCCCCCCCCCCCC
Q 043803          312 AGKNRLVEESDIANFPYLQALVKETLRLHPAGPMS-VRESTENCTI-NGYEIPAKTRVFINVWSIGRDPKHWEAPLEFRP  389 (490)
Q Consensus       312 ~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~-~R~~~~~~~l-~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P  389 (490)
                      +++++.++++++++||||+|||+|+||++|++|.. .|.+.+|+++ +||.|||||.|.++.+++||||++||||++|+|
T Consensus       328 ~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~P  407 (482)
T PTZ00404        328 VNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDP  407 (482)
T ss_pred             hcCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCc
Confidence            98766789999999999999999999999999975 5999999999 999999999999999999999999999999999


Q ss_pred             CccccCCCCccccccCCccceecCCCCCCCCCchHHHHHHHHHHHHHHHhhceeeecCCCCccccCcCCCCccccCCCCc
Q 043803          390 ERFIAEDGKSQLAVRGKHYHYIPFGSGRRACPGISLALHMVHSTLAAMIQCFDWKVNGGDGATVDMEEAPGLTLPRAHPL  469 (490)
Q Consensus       390 ~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  469 (490)
                      |||++..         .+..|+|||+|+|+|+|++||.+|+++++++|+++|+|+.+++  .+.+.....++++. +.++
T Consensus       408 eRwl~~~---------~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~--~~~~~~~~~~~~~~-~~~~  475 (482)
T PTZ00404        408 SRFLNPD---------SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDG--KKIDETEEYGLTLK-PNKF  475 (482)
T ss_pred             cccCCCC---------CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCC--CCCCcccccceeec-CCCc
Confidence            9998641         3467999999999999999999999999999999999998754  22333334455555 5678


Q ss_pred             eeecccc
Q 043803          470 ICVPAAR  476 (490)
Q Consensus       470 ~~~~~~r  476 (490)
                      ++++++|
T Consensus       476 ~v~~~~R  482 (482)
T PTZ00404        476 KVLLEKR  482 (482)
T ss_pred             eeeeecC
Confidence            8888876


No 13 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=8.5e-71  Score=544.05  Aligned_cols=473  Identities=28%  Similarity=0.481  Sum_probs=346.8

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHH---hccC----CCCCCCCCCCCCCCccc----------------------------
Q 043803            1 MADFSGYIILFLIWLVSMILVRTI---LGRS----KITSNLPPSPLALPIIG----------------------------   45 (490)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~----~~~~~~pPgP~~~PiiG----------------------------   45 (490)
                      ||++..-.-.++++++.++.+.++   .+|.    ++..+.||||+++|++|                            
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~   80 (534)
T PLN03018          1 MMSFNTSFQILLGFIVFIASITLLGRILSRPSKTKDRSRQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIAC   80 (534)
T ss_pred             CCCcCchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEE
Confidence            777776555555554443333332   2222    33445899999999999                            


Q ss_pred             -----ceeEEeCCHHHHHHHHHhccccccCCCccchhhhhccCCceeEeCCCChhHHHhHHHHHhhccchhhhhhhhhHH
Q 043803           46 -----LSCIVACSPETAKEILKTHETSFCDRPISATVDYLTYGSADFAFAPYGPHWKFMKKICMTQLLGGQTLNQFIPIR  120 (490)
Q Consensus        46 -----~~~vvv~dp~~i~~il~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i  120 (490)
                           .++|+|+||+++++++.++...|++++.......+..++.++.+..+|+.|+++||.+...+++......+.+.+
T Consensus        81 ~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~  160 (534)
T PLN03018         81 FNFAGTHTITINSDEIAREAFRERDADLADRPQLSIMETIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAAR  160 (534)
T ss_pred             EEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhhhhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence                 578999999999999998888898887554444343333346666679999999999853344555455566666


Q ss_pred             HHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHHHHHHHhccccCCCh------hh-HHHHHHHHHHHHHh---hccccc
Q 043803          121 SEEIKRFMQLMLKKAKASEAVDVGRELIRLTNNVMPRMTMGQICSNNE------EE-ADEVMNLVLSIFEL---SGKFNL  190 (490)
Q Consensus       121 ~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~------~~-~~~~~~~~~~~~~~---~~~~~~  190 (490)
                      ..+++++++.+.+....++++|+.+++..++++++++++||.+++..+      .. ...+......+...   ......
T Consensus       161 ~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (534)
T PLN03018        161 TIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTMRMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSP  240 (534)
T ss_pred             HHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHHHHHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcH
Confidence            678899999998755556789999999999999999999999875321      11 11111122222211   111112


Q ss_pred             ccccc-ccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcHHHHHHhhcccccccccCCHHHHH
Q 043803          191 ADCIW-FCKNLDLQGFGKKMKEARKRFDTMMERIIKEHEETRKTNKETGRDDAPNDLLDILLTVSEDESSEIKLTRENVK  269 (490)
Q Consensus       191 ~~~~p-~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~l~  269 (490)
                      .+.+| +++++...+...+.....+.+.+++.++++++++......  + .....|+++.|++...++ ....+++++++
T Consensus       241 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~-~~~~~d~l~~ll~~~~~~-~~~~ls~~~i~  316 (534)
T PLN03018        241 VDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPIIDERVELWREKG--G-KAAVEDWLDTFITLKDQN-GKYLVTPDEIK  316 (534)
T ss_pred             HHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc--C-CCCcccHHHHHHHhhccc-CCCCCCHHHHH
Confidence            22333 3332212233444555667788888888888766432111  0 013468999999764221 11138999999


Q ss_pred             HHHHHHhhccccchHHHHHHHHHHHHhChHHHHHHHHHHhHhhCCCCccCccccCCChhHHHHHHhhccCCCCCCCcc-c
Q 043803          270 AFFMNIFSGGTDTSAITTEWALAELINHLDIMNKAKEEIDVVAGKNRLVEESDIANFPYLQALVKETLRLHPAGPMSV-R  348 (490)
Q Consensus       270 ~~~~~~l~Ag~dTt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~-R  348 (490)
                      +++.++++||+|||+.+++|++++|++||++|+++++||+++++.++.++.+++.+||||+|||+|+||++|++|... |
T Consensus       317 ~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r  396 (534)
T PLN03018        317 AQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPH  396 (534)
T ss_pred             HHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCc
Confidence            999999999999999999999999999999999999999999987778899999999999999999999999999886 9


Q ss_pred             ccccceeecCEEeCCCCEEEeehhhccCCCCCCCCCCCCCCCccccCCCCcc-ccccCCccceecCCCCCCCCCchHHHH
Q 043803          349 ESTENCTINGYEIPAKTRVFINVWSIGRDPKHWEAPLEFRPERFIAEDGKSQ-LAVRGKHYHYIPFGSGRRACPGISLAL  427 (490)
Q Consensus       349 ~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~-~~~~~~~~~~~~Fg~G~r~C~G~~lA~  427 (490)
                      .+.+|++++||.||||+.|.++.+++||||++|+||++|+||||++.++... ......+..++|||+|+|+|+|++||.
T Consensus       397 ~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~  476 (534)
T PLN03018        397 VARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGT  476 (534)
T ss_pred             ccCCCeeECCEEECCCCEEEEChHHhcCCcccCCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHH
Confidence            9999999999999999999999999999999999999999999996532110 001124568999999999999999999


Q ss_pred             HHHHHHHHHHHhhceeeecCCCCccccCcCCCCccccCCCCceeeccccCCC
Q 043803          428 HMVHSTLAAMIQCFDWKVNGGDGATVDMEEAPGLTLPRAHPLICVPAARLNP  479 (490)
Q Consensus       428 ~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~  479 (490)
                      +|+++++++|+++|++++.++. .+++.....+.+. .+.++.|++++|..+
T Consensus       477 ~e~~~~la~ll~~f~~~~~~~~-~~~~~~~~~~~~~-~p~~~~v~~~~R~~~  526 (534)
T PLN03018        477 IMMVMMLARFLQGFNWKLHQDF-GPLSLEEDDASLL-MAKPLLLSVEPRLAP  526 (534)
T ss_pred             HHHHHHHHHHHHhceEEeCCCC-CCCCcccccccee-cCCCeEEEEEecccc
Confidence            9999999999999999987652 2233322234333 457999999999543


No 14 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=6.2e-72  Score=546.65  Aligned_cols=425  Identities=29%  Similarity=0.469  Sum_probs=335.3

Q ss_pred             CCCCCCCCCCCCccc---------------------------------ceeEEeCCHHHHHHHHHhccccccCCCccc-h
Q 043803           31 TSNLPPSPLALPIIG---------------------------------LSCIVACSPETAKEILKTHETSFCDRPISA-T   76 (490)
Q Consensus        31 ~~~~pPgP~~~PiiG---------------------------------~~~vvv~dp~~i~~il~~~~~~f~~~~~~~-~   76 (490)
                      ....||||+++|++|                                 .+.|+++||+.+++|+.++...+.+.+.+. .
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            567899999999999                                 568999999999999976555454444333 2


Q ss_pred             hhhhccCCceeEeCCCChhHHHhHHHHHhhccchhhhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHHHH
Q 043803           77 VDYLTYGSADFAFAPYGPHWKFMKKICMTQLLGGQTLNQFIPIRSEEIKRFMQLMLKKAKASEAVDVGRELIRLTNNVMP  156 (490)
Q Consensus        77 ~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~  156 (490)
                      ...+.  |.+++++. |+.|+.+||++ .+.|+...++.+.+.+.+++..++..+.... .++.+|+.++++++++|+++
T Consensus       113 ~~~~l--G~gll~~~-g~~W~~~Rk~~-~~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~-~~~~vd~~~~~~~~tld~i~  187 (497)
T KOG0157|consen  113 LKPWL--GDGLLFSD-GEKWHKHRKLL-TPAFHFEILKSFVPVFIESSLILLLLLELAA-SGEEVDLQDLLKRLTLDIIC  187 (497)
T ss_pred             HHHHh--cCccccCC-chHHHHHHhhc-cHhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCeEcHHHHHHHHHHHHHH
Confidence            22222  22455554 99999999998 6999999999999999999988888877743 33349999999999999999


Q ss_pred             HHHhcccc-CCChhhHHHHHHHHHHHHHhhcccccccccc-ccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 043803          157 RMTMGQIC-SNNEEEADEVMNLVLSIFELSGKFNLADCIW-FCKNLDLQGFGKKMKEARKRFDTMMERIIKEHEETRKTN  234 (490)
Q Consensus       157 ~~~fG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  234 (490)
                      .++||... +.......++.+++..+......   ....| +..++...+..++..++.+.+.++++++|.++++.....
T Consensus       188 ~~~~G~~~~~~~~~~~~~~~~a~~~~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~  264 (497)
T KOG0157|consen  188 KTAMGPESLDAEGPELFEYVQAFDDLTELISK---RINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREELEKE  264 (497)
T ss_pred             HHhcCCccccccCCcccHHHHHHHHHHHHHHH---HHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999322 22222334555666554443322   22233 333333334778899999999999999999999865533


Q ss_pred             ccCCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhccccchHHHHHHHHHHHHhChHHHHHHHHHHhHhhCC
Q 043803          235 KETGRDDAPNDLLDILLTVSEDESSEIKLTRENVKAFFMNIFSGGTDTSAITTEWALAELINHLDIMNKAKEEIDVVAGK  314 (490)
Q Consensus       235 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~l~~~~~~~l~Ag~dTt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~  314 (490)
                      +..+ .....|+++.+.... +    ..++++++++++.+|++||+||||++++|++++|+.||++|+|+++|++++++.
T Consensus       265 ~~~~-~~~~~d~L~~~~~~~-~----~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~  338 (497)
T KOG0157|consen  265 GSGE-EKKRLDFLDTLLLEE-D----KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGN  338 (497)
T ss_pred             CCcc-cchhhhHHHHHHHhc-c----CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCC
Confidence            2111 124678888533221 1    469999999999999999999999999999999999999999999999999974


Q ss_pred             CCc-cCccccCCChhHHHHHHhhccCCCCCCCcccccccceee-cCEEeCCCCEEEeehhhccCCCCCCC-CCCCCCCCc
Q 043803          315 NRL-VEESDIANFPYLQALVKETLRLHPAGPMSVRESTENCTI-NGYEIPAKTRVFINVWSIGRDPKHWE-APLEFRPER  391 (490)
Q Consensus       315 ~~~-~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~~~~l-~g~~ip~G~~v~~~~~~~~~d~~~~~-~p~~F~P~R  391 (490)
                      +.. .+....++|+||++||+|||||+||+|+..|.+.+|+++ +||.||||+.|.++++++|||+.+|+ ||++|||||
T Consensus       339 ~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeR  418 (497)
T KOG0157|consen  339 RDDKWEVEKLDQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPER  418 (497)
T ss_pred             CCCCCChhhhhhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccc
Confidence            332 233333369999999999999999999999999999999 58999999999999999999999995 999999999


Q ss_pred             cccCCCCccccccCCccceecCCCCCCCCCchHHHHHHHHHHHHHHHhhceeeecCCCCccccCcCCCCccccCCCCcee
Q 043803          392 FIAEDGKSQLAVRGKHYHYIPFGSGRRACPGISLALHMVHSTLAAMIQCFDWKVNGGDGATVDMEEAPGLTLPRAHPLIC  471 (490)
Q Consensus       392 ~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  471 (490)
                      |+++....    ..+++.|+|||+|||+|+|++||++|+|+++++|+++|+|++..+..    ....+..++++..++.|
T Consensus       419 f~~~~~~~----~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~----~~~~~~~~l~~~~gl~v  490 (497)
T KOG0157|consen  419 FLDGEEKA----KRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK----PKPVPELTLRPKNGLKV  490 (497)
T ss_pred             cCCCCCcC----CCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC----ceeeeEEEEEecCCeEE
Confidence            99753211    34678999999999999999999999999999999999999886521    44567788899999999


Q ss_pred             eccccC
Q 043803          472 VPAARL  477 (490)
Q Consensus       472 ~~~~r~  477 (490)
                      ++++|.
T Consensus       491 ~~~~r~  496 (497)
T KOG0157|consen  491 KLRPRG  496 (497)
T ss_pred             EEEeCC
Confidence            999986


No 15 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=2.3e-70  Score=537.06  Aligned_cols=423  Identities=28%  Similarity=0.437  Sum_probs=337.4

Q ss_pred             CCCCCCCCccc-------------------------------ceeEEeCCHHHHHHHHHhccccccCCCccchhhhhccC
Q 043803           35 PPSPLALPIIG-------------------------------LSCIVACSPETAKEILKTHETSFCDRPISATVDYLTYG   83 (490)
Q Consensus        35 pPgP~~~PiiG-------------------------------~~~vvv~dp~~i~~il~~~~~~f~~~~~~~~~~~~~~~   83 (490)
                      ||||+++|++|                               .+.|+|+||+++++|+.++...|..++.......+..+
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~   80 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD   80 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence            78999999999                               78899999999999999888888777654333333332


Q ss_pred             CceeEeCCCChhHHHhHHHHHhhccchhhhhhhhhHHHHHHHHHHHHHHHHhc--CCCceehHHHHHHHHHHHHHHHHhc
Q 043803           84 SADFAFAPYGPHWKFMKKICMTQLLGGQTLNQFIPIRSEEIKRFMQLMLKKAK--ASEAVDVGRELIRLTNNVMPRMTMG  161 (490)
Q Consensus        84 ~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~--~~~~vdl~~~~~~~~~~vi~~~~fG  161 (490)
                      +..+.+..+|+.|+.+||.+..++|+...++.+.+.+++.++.+++.+.....  .++++|+.++++.+++|+++.++||
T Consensus        81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG  160 (466)
T PLN02655         81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQALG  160 (466)
T ss_pred             CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHhc
Confidence            22334445699999999988788899888888999999999999998876533  4678999999999999999999999


Q ss_pred             cccCCCh--hh------HHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 043803          162 QICSNNE--EE------ADEVMNLVLSIFELSGKFNLADCIWFCKNLDLQGFGKKMKEARKRFDTMMERIIKEHEETRKT  233 (490)
Q Consensus       162 ~~~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  233 (490)
                      .+++...  +.      ...+...+..++.......+.+.+|++++++.....+...+....+.+++..+++++++....
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  240 (466)
T PLN02655        161 EDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKKRIAR  240 (466)
T ss_pred             cccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            9876432  11      122333344444433333344567766665332233344444455567888888777665332


Q ss_pred             cccCCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhccccchHHHHHHHHHHHHhChHHHHHHHHHHhHhhC
Q 043803          234 NKETGRDDAPNDLLDILLTVSEDESSEIKLTRENVKAFFMNIFSGGTDTSAITTEWALAELINHLDIMNKAKEEIDVVAG  313 (490)
Q Consensus       234 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~l~~~~~~~l~Ag~dTt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~  313 (490)
                      ++      ...|+++.|++..      ..++++++.++++++++||+|||+++|+|++++|++||++|+++++|++.+++
T Consensus       241 ~~------~~~d~l~~ll~~~------~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~  308 (466)
T PLN02655        241 GE------ERDCYLDFLLSEA------THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCG  308 (466)
T ss_pred             CC------CcccHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhC
Confidence            22      3468999999763      24899999999999999999999999999999999999999999999999988


Q ss_pred             CCCccCccccCCChhHHHHHHhhccCCCCCCCcc-cccccceeecCEEeCCCCEEEeehhhccCCCCCCCCCCCCCCCcc
Q 043803          314 KNRLVEESDIANFPYLQALVKETLRLHPAGPMSV-RESTENCTINGYEIPAKTRVFINVWSIGRDPKHWEAPLEFRPERF  392 (490)
Q Consensus       314 ~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~-R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~  392 (490)
                      .+. +++++++++|||+|||+|+||++|+++... |.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||
T Consensus       309 ~~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~  387 (466)
T PLN02655        309 DER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERF  387 (466)
T ss_pred             CCC-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCcccc
Confidence            644 899999999999999999999999999986 999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCccccccCCccceecCCCCCCCCCchHHHHHHHHHHHHHHHhhceeeecCCCCccccCcCCCCccccCCCCceee
Q 043803          393 IAEDGKSQLAVRGKHYHYIPFGSGRRACPGISLALHMVHSTLAAMIQCFDWKVNGGDGATVDMEEAPGLTLPRAHPLICV  472 (490)
Q Consensus       393 l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  472 (490)
                      ++.+..     ......++|||+|+|+|+|++||.+|+++++++||++|+++++++...   .....++++.++.++.|.
T Consensus       388 ~~~~~~-----~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  459 (466)
T PLN02655        388 LGEKYE-----SADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDEE---KEDTVQLTTQKLHPLHAH  459 (466)
T ss_pred             CCCCcc-----cCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCcc---ccchhheeEeecCCcEEE
Confidence            975311     113467999999999999999999999999999999999999765321   233456667788899999


Q ss_pred             ccccCC
Q 043803          473 PAARLN  478 (490)
Q Consensus       473 ~~~r~~  478 (490)
                      +++|.+
T Consensus       460 ~~~r~~  465 (466)
T PLN02655        460 LKPRGS  465 (466)
T ss_pred             EeecCC
Confidence            998865


No 16 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=3.8e-70  Score=537.63  Aligned_cols=408  Identities=20%  Similarity=0.310  Sum_probs=311.7

Q ss_pred             eeEEeCCHHHHHHHHHhccccccCCCccchhhhhccCCceeEeCCCChhHHHhHHHHHhhccchhhhhh--hhhHHHHHH
Q 043803           47 SCIVACSPETAKEILKTHETSFCDRPISATVDYLTYGSADFAFAPYGPHWKFMKKICMTQLLGGQTLNQ--FIPIRSEEI  124 (490)
Q Consensus        47 ~~vvv~dp~~i~~il~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~--~~~~i~~~~  124 (490)
                      +.|+|+||+++++|+.++...|.+++......  ...+.+ ++..+|+.|+++||.+ .+.|+...+..  +.+.+.+++
T Consensus        81 ~~vvv~dpe~i~~il~~~~~~~~k~~~~~~~~--~~~g~g-l~~~~g~~Wr~~Rk~l-~p~F~~~~~~~~~~~~~~~~~~  156 (500)
T PLN02169         81 DMLFTADPKNIHHILSSNFGNYPKGPEFKKIF--DVLGEG-ILTVDFELWEDLRKSN-HALFHNQDFIELSLSSNKSKLK  156 (500)
T ss_pred             CeEEEcCHHHHHHHHhhCcccCCCcHHHHHHH--HhhcCc-ccccCcHHHHHHHHHH-HHHhhhHHHHHHHHHHHHHHHH
Confidence            66999999999999998777776654322111  212323 5556799999999998 69999887764  346677888


Q ss_pred             HHHHHHHHHHhcCCCceehHHHHHHHHHHHHHHHHhccccCCCh--hhHHHHHHHHHHHHHhhccccccccccccc----
Q 043803          125 KRFMQLMLKKAKASEAVDVGRELIRLTNNVMPRMTMGQICSNNE--EEADEVMNLVLSIFELSGKFNLADCIWFCK----  198 (490)
Q Consensus       125 ~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~----  198 (490)
                      +.+++.+.+.+.+++++|+.+.+..+++|++++++||.+.+..+  .....+.+.+........   .....|++.    
T Consensus       157 ~~l~~~l~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~  233 (500)
T PLN02169        157 EGLVPFLDNAAHENIIIDLQDVFMRFMFDTSSILMTGYDPMSLSIEMLEVEFGEAADIGEEAIY---YRHFKPVILWRLQ  233 (500)
T ss_pred             HHHHHHHHHHHhcCCeEeHHHHHHHHHHHHHHhheeCCCccccCCCCCCCHHHHHHHHHHHHHH---hHHhccHHHHHHH
Confidence            88998887765567789999999999999999999999875432  111234443333322111   111123211    


Q ss_pred             cccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcHHHHHHhhcccc-cccccCCHHHHHHHHHHHhh
Q 043803          199 NLDLQGFGKKMKEARKRFDTMMERIIKEHEETRKTNKETGRDDAPNDLLDILLTVSEDE-SSEIKLTRENVKAFFMNIFS  277 (490)
Q Consensus       199 ~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~-~~~~~l~~~~l~~~~~~~l~  277 (490)
                      .+...+..++..+..+.+.+++.+.|+++++......  +.+....|+++.+++..... ..+..++++++.+++.++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~~~~--~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~  311 (500)
T PLN02169        234 NWIGIGLERKMRTALATVNRMFAKIISSRRKEEISRA--ETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVL  311 (500)
T ss_pred             HHhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhccc--cccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHH
Confidence            1112345677788899999999999988876422111  00012468999999863211 11124788999999999999


Q ss_pred             ccccchHHHHHHHHHHHHhChHHHHHHHHHHhHhhCCCCccCccccCCChhHHHHHHhhccCCCCCCCcccccccceee-
Q 043803          278 GGTDTSAITTEWALAELINHLDIMNKAKEEIDVVAGKNRLVEESDIANFPYLQALVKETLRLHPAGPMSVRESTENCTI-  356 (490)
Q Consensus       278 Ag~dTt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~~~~l-  356 (490)
                      ||+|||+++|+|++|+|++||++|+|+++||++++      +++++.+||||+|||+|+||++|++|...|.+.+|.++ 
T Consensus       312 AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~  385 (500)
T PLN02169        312 AGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTKF------DNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLP  385 (500)
T ss_pred             hchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCcc
Confidence            99999999999999999999999999999998763      67899999999999999999999999999887777665 


Q ss_pred             cCEEeCCCCEEEeehhhccCCCCCC-CCCCCCCCCccccCCCCccccccCCccceecCCCCCCCCCchHHHHHHHHHHHH
Q 043803          357 NGYEIPAKTRVFINVWSIGRDPKHW-EAPLEFRPERFIAEDGKSQLAVRGKHYHYIPFGSGRRACPGISLALHMVHSTLA  435 (490)
Q Consensus       357 ~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~  435 (490)
                      +||.||||+.|.+++|++||||++| +||++|+||||+++++  .. ....++.|+|||+|+|+|+|++||++|++++++
T Consensus       386 ~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~~F~PeRfl~~~~--~~-~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la  462 (500)
T PLN02169        386 SGHKVDAESKIVICIYALGRMRSVWGEDALDFKPERWISDNG--GL-RHEPSYKFMAFNSGPRTCLGKHLALLQMKIVAL  462 (500)
T ss_pred             CCEEECCCCEEEEcHHHhhCCccccCCChhhcCccccCCCCC--Cc-cCCCCccccCCCCCCCCCcCHHHHHHHHHHHHH
Confidence            9999999999999999999999999 8999999999996532  10 112367899999999999999999999999999


Q ss_pred             HHHhhceeeecCCCCccccCcCCCCccccCCCCceeecccc
Q 043803          436 AMIQCFDWKVNGGDGATVDMEEAPGLTLPRAHPLICVPAAR  476 (490)
Q Consensus       436 ~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  476 (490)
                      +||++|+|+++++  .+.  ....+.++.++.++.+++++|
T Consensus       463 ~ll~~f~~~~~~~--~~~--~~~~~~~l~~~~gl~l~l~~~  499 (500)
T PLN02169        463 EIIKNYDFKVIEG--HKI--EAIPSILLRMKHGLKVTVTKK  499 (500)
T ss_pred             HHHHHCEEEEcCC--CCc--ccccceEEecCCCEEEEEEeC
Confidence            9999999998754  222  334556778889999999887


No 17 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=6e-70  Score=541.97  Aligned_cols=408  Identities=19%  Similarity=0.336  Sum_probs=317.5

Q ss_pred             eeEEeCCHHHHHHHHHhccccccCCCccchhhhhccCCceeEeCCCChhHHHhHHHHHhhccchhhhhhhhhHHHHHHHH
Q 043803           47 SCIVACSPETAKEILKTHETSFCDRPISATVDYLTYGSADFAFAPYGPHWKFMKKICMTQLLGGQTLNQFIPIRSEEIKR  126 (490)
Q Consensus        47 ~~vvv~dp~~i~~il~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~  126 (490)
                      +.|+++||+++++++.++. .+..++...........+.+ ++..+|+.|+++||.+ .+.|+..+++.+.+.+.++++.
T Consensus       105 ~~vvv~dp~~v~~il~~~~-~~~~r~~~~~~~~~~~~g~~-l~~~~g~~Wk~~Rk~~-~~~f~~~~l~~~~~~i~~~~~~  181 (516)
T PLN02290        105 PRLCLTETELIKELLTKYN-TVTGKSWLQQQGTKHFIGRG-LLMANGADWYHQRHIA-APAFMGDRLKGYAGHMVECTKQ  181 (516)
T ss_pred             cEEEECCHHHHHHHHhcCC-CCCCCcchhhhHHHHHhcCC-ccccCchHHHHHHhhc-ccccCHHHHHHHHHHHHHHHHH
Confidence            4589999999999998763 34444432111111111223 5566799999999998 6999999999999999999999


Q ss_pred             HHHHHHHHhcCC-CceehHHHHHHHHHHHHHHHHhccccCCChhhHHHHHHHHHHHHHhhccccccccccccccccccch
Q 043803          127 FMQLMLKKAKAS-EAVDVGRELIRLTNNVMPRMTMGQICSNNEEEADEVMNLVLSIFELSGKFNLADCIWFCKNLDLQGF  205 (490)
Q Consensus       127 l~~~l~~~~~~~-~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~  205 (490)
                      +++.+.+....+ +++|+.+++..+++|++++++||.+++..++    +.+.+..+............+|+++++ +...
T Consensus       182 l~~~l~~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~p~~~~~-p~~~  256 (516)
T PLN02290        182 MLQSLQKAVESGQTEVEIGEYMTRLTADIISRTEFDSSYEKGKQ----IFHLLTVLQRLCAQATRHLCFPGSRFF-PSKY  256 (516)
T ss_pred             HHHHHHHHHhcCCceEEhHHHHHHHHHHHHHHHHcCCccccchH----HHHHHHHHHHHHHHhhhhhcCchhhhC-CChh
Confidence            999998764433 5899999999999999999999998764322    222222222211111111223444443 2233


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcHHHHHHhhcccc-cccccCCHHHHHHHHHHHhhccccchH
Q 043803          206 GKKMKEARKRFDTMMERIIKEHEETRKTNKETGRDDAPNDLLDILLTVSEDE-SSEIKLTRENVKAFFMNIFSGGTDTSA  284 (490)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~-~~~~~l~~~~l~~~~~~~l~Ag~dTt~  284 (490)
                      .+++....+.+.+++.+.++++++..+.+..   +....|+++.++++..+. .++..++++++.++++++++||+|||+
T Consensus       257 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta  333 (516)
T PLN02290        257 NREIKSLKGEVERLLMEIIQSRRDCVEIGRS---SSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTA  333 (516)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcccC---CCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHH
Confidence            4556667788889999999888765432211   113579999999864322 122348899999999999999999999


Q ss_pred             HHHHHHHHHHHhChHHHHHHHHHHhHhhCCCCccCccccCCChhHHHHHHhhccCCCCCCCcccccccceeecCEEeCCC
Q 043803          285 ITTEWALAELINHLDIMNKAKEEIDVVAGKNRLVEESDIANFPYLQALVKETLRLHPAGPMSVRESTENCTINGYEIPAK  364 (490)
Q Consensus       285 ~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~~~~l~g~~ip~G  364 (490)
                      ++++|++++|++||++|+|+++|++++++.+ .++++++++||||+|||+||||++|++|...|.+.+|++++||.||||
T Consensus       334 ~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IP~G  412 (516)
T PLN02290        334 LLLTWTLMLLASNPTWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATLLPRMAFEDIKLGDLHIPKG  412 (516)
T ss_pred             HHHHHHHHHHhcCHHHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccccceeecCCeeECCEEECCC
Confidence            9999999999999999999999999998864 789999999999999999999999999987799999999999999999


Q ss_pred             CEEEeehhhccCCCCCC-CCCCCCCCCccccCCCCccccccCCccceecCCCCCCCCCchHHHHHHHHHHHHHHHhhcee
Q 043803          365 TRVFINVWSIGRDPKHW-EAPLEFRPERFIAEDGKSQLAVRGKHYHYIPFGSGRRACPGISLALHMVHSTLAAMIQCFDW  443 (490)
Q Consensus       365 ~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~  443 (490)
                      |.|.++.+++||||++| +||++|+||||++.+   .    .....|+|||.|+|+|+|++||++|+++++++||++|++
T Consensus       413 t~V~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~---~----~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~  485 (516)
T PLN02290        413 LSIWIPVLAIHHSEELWGKDANEFNPDRFAGRP---F----APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSF  485 (516)
T ss_pred             CEEEecHHHhcCChhhhCCChhhcCccccCCCC---C----CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceE
Confidence            99999999999999999 899999999999531   1    133579999999999999999999999999999999999


Q ss_pred             eecCCCCccccCcCCCCccccCCCCceeeccccC
Q 043803          444 KVNGGDGATVDMEEAPGLTLPRAHPLICVPAARL  477 (490)
Q Consensus       444 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  477 (490)
                      +++++..    ......++..|..++.+++++|.
T Consensus       486 ~~~~~~~----~~~~~~~~~~p~~~~~~~~~~~~  515 (516)
T PLN02290        486 TISDNYR----HAPVVVLTIKPKYGVQVCLKPLN  515 (516)
T ss_pred             eeCCCcc----cCccceeeecCCCCCeEEEEeCC
Confidence            9876521    11123466778889999999875


No 18 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=7.6e-70  Score=499.70  Aligned_cols=424  Identities=24%  Similarity=0.372  Sum_probs=355.7

Q ss_pred             CCCCCCCCCCCccc-----------------------------------ceeEEeCCHHHHHHHHHhccccccCCC-ccc
Q 043803           32 SNLPPSPLALPIIG-----------------------------------LSCIVACSPETAKEILKTHETSFCDRP-ISA   75 (490)
Q Consensus        32 ~~~pPgP~~~PiiG-----------------------------------~~~vvv~dp~~i~~il~~~~~~f~~~~-~~~   75 (490)
                      ..-+|||+++|++|                                   ...|.+.||++++.+|+.++ .+.-|+ ..+
T Consensus        49 ~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG-~~P~Rp~~~~  127 (519)
T KOG0159|consen   49 FEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEG-KYPFRPLLIE  127 (519)
T ss_pred             hhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCC-CCCCcccccc
Confidence            34579999999999                                   57899999999999999764 455554 222


Q ss_pred             hh-hh-hccCCceeEeCCCChhHHHhHHHHHhhccchhhhhhhhhHHHHHHHHHHHHHHHHhc---CCCceehHHHHHHH
Q 043803           76 TV-DY-LTYGSADFAFAPYGPHWKFMKKICMTQLLGGQTLNQFIPIRSEEIKRFMQLMLKKAK---ASEAVDVGRELIRL  150 (490)
Q Consensus        76 ~~-~~-~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~---~~~~vdl~~~~~~~  150 (490)
                      .+ .+ -.+++..+++...|+.|.+.|..+...++++++++.+.|.+++.++++++.+....+   ...+.|+.+.+.++
T Consensus       128 ~w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~w  207 (519)
T KOG0159|consen  128 PWVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELYRW  207 (519)
T ss_pred             hhhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHH
Confidence            22 11 123444567888899999999999888899999999999999999999999998765   33589999999999


Q ss_pred             HHHHHHHHHhccccCCCh----hhHHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHH
Q 043803          151 TNNVMPRMTMGQICSNNE----EEADEVMNLVLSIFELSGKFNLADCIWFCKNLDLQGFGKKMKEARKRFDTMMERIIKE  226 (490)
Q Consensus       151 ~~~vi~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~  226 (490)
                      +++.||.++||.+++...    ++...+++++..++.......+..  ++++++ .++.++++.++.+.+.++..+.|++
T Consensus       208 slEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~~~p--~l~r~~-~t~~wk~~~~~~D~i~~~~~~~Id~  284 (519)
T KOG0159|consen  208 SLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLMLMP--SLWRYF-PTKVWKDFVRAWDQIFDVGDKYIDN  284 (519)
T ss_pred             HHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHHhcc--hHHHhC-CChHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999998653    456789999999988765543332  556665 5667899999999999999999999


Q ss_pred             HHHhhhccccCCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhccccchHHHHHHHHHHHHhChHHHHHHHH
Q 043803          227 HEETRKTNKETGRDDAPNDLLDILLTVSEDESSEIKLTRENVKAFFMNIFSGGTDTSAITTEWALAELINHLDIMNKAKE  306 (490)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~l~~~~~~~l~Ag~dTt~~~l~~~l~~L~~~p~~q~~l~~  306 (490)
                      ..++.+.....+  .+..+++-.++..       +.++.+++..+++++++||.||||++++|++|+|++||++|++|++
T Consensus       285 ~l~~l~~~~~~~--~~~~~~l~~~L~~-------~~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~  355 (519)
T KOG0159|consen  285 ALEELEKQDSAG--SEYTGSLLELLLR-------KELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLRE  355 (519)
T ss_pred             HHHHHHhccccc--cchhHHHHHHHHH-------ccCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHH
Confidence            988876533211  1223333333332       2488999999999999999999999999999999999999999999


Q ss_pred             HHhHhhCC-CCccCccccCCChhHHHHHHhhccCCCCCCCcccccccceeecCEEeCCCCEEEeehhhccCCCCCCCCCC
Q 043803          307 EIDVVAGK-NRLVEESDIANFPYLQALVKETLRLHPAGPMSVRESTENCTINGYEIPAKTRVFINVWSIGRDPKHWEAPL  385 (490)
Q Consensus       307 Ei~~~~~~-~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~  385 (490)
                      |+..++.. +..++.+++.++|||+||||||+||||++|++.|...+|.+++||.|||||.|.++.+...+||++|++|+
T Consensus       356 Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~  435 (519)
T KOG0159|consen  356 EILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGNGRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPE  435 (519)
T ss_pred             HHHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccccccccchhceeccceecCCCeEEEeehhhccChhhCCCcc
Confidence            99999887 56789999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCccccCCCCccccccCCccceecCCCCCCCCCchHHHHHHHHHHHHHHHhhceeeecCCCCccccCcCCCCccccC
Q 043803          386 EFRPERFIAEDGKSQLAVRGKHYHYIPFGSGRRACPGISLALHMVHSTLAAMIQCFDWKVNGGDGATVDMEEAPGLTLPR  465 (490)
Q Consensus       386 ~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  465 (490)
                      +|+|||||.++.     ...+++.++|||.|+|+|+|+++|.+|+.++||+++++|+++..++  .  ++.....+++.|
T Consensus       436 ~F~PeRWL~~~~-----~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~--~--pv~~~~~~il~P  506 (519)
T KOG0159|consen  436 EFLPERWLKPST-----KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHE--E--PVEYVYRFILVP  506 (519)
T ss_pred             ccChhhhccccc-----CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCC--C--CccceeEEEEcC
Confidence            999999998742     2357899999999999999999999999999999999999998764  3  334455667778


Q ss_pred             CCCceeeccccC
Q 043803          466 AHPLICVPAARL  477 (490)
Q Consensus       466 ~~~~~~~~~~r~  477 (490)
                      ..++.++++.|+
T Consensus       507 ~~~l~f~f~~r~  518 (519)
T KOG0159|consen  507 NRPLRFKFRPRN  518 (519)
T ss_pred             CCCcceeeeeCC
Confidence            899999999875


No 19 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=4.5e-69  Score=531.79  Aligned_cols=412  Identities=19%  Similarity=0.267  Sum_probs=313.2

Q ss_pred             CCCCCCCCCCCCCCccc-----------------------------------ceeEEeCCHHHHHHHHHhccccccCCCc
Q 043803           29 KITSNLPPSPLALPIIG-----------------------------------LSCIVACSPETAKEILKTHETSFCDRPI   73 (490)
Q Consensus        29 ~~~~~~pPgP~~~PiiG-----------------------------------~~~vvv~dp~~i~~il~~~~~~f~~~~~   73 (490)
                      +++.++||||+++|++|                                   ++.|+++||+++++|+.+++..|+.+..
T Consensus        34 ~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~  113 (490)
T PLN02500         34 QKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYP  113 (490)
T ss_pred             cCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCc
Confidence            44557999999999999                                   6889999999999999987766754322


Q ss_pred             cchhhhhccCCceeEeCCCChhHHHhHHHHHhhccchhhhhh-hhhHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHH
Q 043803           74 SATVDYLTYGSADFAFAPYGPHWKFMKKICMTQLLGGQTLNQ-FIPIRSEEIKRFMQLMLKKAKASEAVDVGRELIRLTN  152 (490)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~-~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~  152 (490)
                      ......+  ++.+ ++..+|+.|+++||.+ .+.|++.+++. +.+.+.+.+..+++.+.    .++++|+.+.++.+++
T Consensus       114 ~~~~~~~--g~~~-~~~~~g~~wr~~Rk~~-~~~f~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~vd~~~~~~~~~~  185 (490)
T PLN02500        114 RSIGGIL--GKWS-MLVLVGDMHRDMRSIS-LNFLSHARLRTHLLKEVERHTLLVLDSWK----ENSTFSAQDEAKKFTF  185 (490)
T ss_pred             hHHHHHh--Cccc-ccccCCHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHHHhC----CCCCEEehHHHHHHHH
Confidence            2111112  2223 4455799999999998 58899998876 56777777777777653    2457999999999999


Q ss_pred             HHHHHHHhccccCCChhhHHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 043803          153 NVMPRMTMGQICSNNEEEADEVMNLVLSIFELSGKFNLADCIWFCKNLDLQGFGKKMKEARKRFDTMMERIIKEHEETRK  232 (490)
Q Consensus       153 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  232 (490)
                      +++++++||.+.+..  ....+...+.........  ....+|.       ...++..+..+.+.+++.+.++++++...
T Consensus       186 ~vi~~~~fg~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~p~-------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  254 (490)
T PLN02500        186 NLMAKHIMSMDPGEE--ETEQLKKEYVTFMKGVVS--APLNFPG-------TAYRKALKSRATILKFIERKMEERIEKLK  254 (490)
T ss_pred             HHHHHHHhCCCCCch--HHHHHHHHHHHHHhhhhc--chhcCCC-------cccHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            999999999875432  122233333332221110  0001121       11245556778888899999888776433


Q ss_pred             ccccCCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhccccchHHHHHHHHHHHHhChHHHHHHHHHHhHhh
Q 043803          233 TNKETGRDDAPNDLLDILLTVSEDESSEIKLTRENVKAFFMNIFSGGTDTSAITTEWALAELINHLDIMNKAKEEIDVVA  312 (490)
Q Consensus       233 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~l~~~~~~~l~Ag~dTt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~  312 (490)
                      .++.   .....|+++.+++.       ..++++++++++.++++||+|||+++++|++++|++||++|+|+++|++++.
T Consensus       255 ~~~~---~~~~~d~l~~ll~~-------~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~  324 (490)
T PLN02500        255 EEDE---SVEEDDLLGWVLKH-------SNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIA  324 (490)
T ss_pred             cccC---CCCcchHHHHHHhc-------cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHh
Confidence            2110   01346899999874       1388999999999999999999999999999999999999999999999876


Q ss_pred             C-----CCCccCccccCCChhHHHHHHhhccCCCCCCCcccccccceeecCEEeCCCCEEEeehhhccCCCCCCCCCCCC
Q 043803          313 G-----KNRLVEESDIANFPYLQALVKETLRLHPAGPMSVRESTENCTINGYEIPAKTRVFINVWSIGRDPKHWEAPLEF  387 (490)
Q Consensus       313 ~-----~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F  387 (490)
                      +     .++.++++++++||||+|||+|+||++|++|...|.+.+|++++||.|||||.|+++.+++||||++|+||++|
T Consensus       325 ~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F  404 (490)
T PLN02500        325 RAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFLHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLF  404 (490)
T ss_pred             hccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCeeeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCcccc
Confidence            3     23458999999999999999999999999998889999999999999999999999999999999999999999


Q ss_pred             CCCccccCCCCcccc--ccCCccceecCCCCCCCCCchHHHHHHHHHHHHHHHhhceeeecCCCCccccCcCCCCccccC
Q 043803          388 RPERFIAEDGKSQLA--VRGKHYHYIPFGSGRRACPGISLALHMVHSTLAAMIQCFDWKVNGGDGATVDMEEAPGLTLPR  465 (490)
Q Consensus       388 ~P~R~l~~~~~~~~~--~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  465 (490)
                      +||||+++++.....  ....++.|+|||.|+|+|+|++||.+|+++++++|+++|+|++++++ ...  . .. .+ .+
T Consensus       405 ~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~-~~~--~-~~-~~-~~  478 (490)
T PLN02500        405 NPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEAD-QAF--A-FP-FV-DF  478 (490)
T ss_pred             ChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCC-cce--e-cc-cc-cC
Confidence            999999753211100  01235689999999999999999999999999999999999987652 111  1 11 22 33


Q ss_pred             CCCceeeccc
Q 043803          466 AHPLICVPAA  475 (490)
Q Consensus       466 ~~~~~~~~~~  475 (490)
                      +.++.|++++
T Consensus       479 ~~~l~~~~~~  488 (490)
T PLN02500        479 PKGLPIRVRR  488 (490)
T ss_pred             CCCceEEEEe
Confidence            4688888764


No 20 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=4.8e-69  Score=535.07  Aligned_cols=429  Identities=19%  Similarity=0.323  Sum_probs=321.3

Q ss_pred             CCCCCCCCCccc--------------------------------ceeEEeCCHHHHHHHHHhccccccCCCccchhhhhc
Q 043803           34 LPPSPLALPIIG--------------------------------LSCIVACSPETAKEILKTHETSFCDRPISATVDYLT   81 (490)
Q Consensus        34 ~pPgP~~~PiiG--------------------------------~~~vvv~dp~~i~~il~~~~~~f~~~~~~~~~~~~~   81 (490)
                      .+|||+++|++|                                .+.|+++||+++++|+.++...|.+.+........ 
T Consensus        31 ~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~~-  109 (516)
T PLN03195         31 NRKGPKSWPIIGAALEQLKNYDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYMEV-  109 (516)
T ss_pred             ccCCCCCCCeecchHHHHhccchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHHHH-
Confidence            379999999999                                57899999999999998765556544322111111 


Q ss_pred             cCCceeEeCCCChhHHHhHHHHHhhccchhhhhhhhhHH-HHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHHHHHHHh
Q 043803           82 YGSADFAFAPYGPHWKFMKKICMTQLLGGQTLNQFIPIR-SEEIKRFMQLMLKKAKASEAVDVGRELIRLTNNVMPRMTM  160 (490)
Q Consensus        82 ~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i-~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~f  160 (490)
                      ..+.+ +++.+|+.|+++||.+ ++.|+.++++.+.+.+ .+.++.+++.+.+....++++|+.+++..+++|+++.++|
T Consensus       110 ~~g~~-l~~~~g~~w~~~Rr~l-~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~f  187 (516)
T PLN03195        110 LLGDG-IFNVDGELWRKQRKTA-SFEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICKVGF  187 (516)
T ss_pred             HhcCe-eeccCcHHHHHHHHhc-chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHHHHh
Confidence            11223 5667899999999998 7899999999998876 6667778877765444567899999999999999999999


Q ss_pred             ccccCCChh--hHHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCC
Q 043803          161 GQICSNNEE--EADEVMNLVLSIFELSGKFNLADCIWFCKNLDLQGFGKKMKEARKRFDTMMERIIKEHEETRKTNKETG  238 (490)
Q Consensus       161 G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  238 (490)
                      |.+++..++  ....+.+.++....... ......++.+.++......+.+.+..+.+.+++.+.++++++.....+.. 
T Consensus       188 G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-  265 (516)
T PLN03195        188 GVEIGTLSPSLPENPFAQAFDTANIIVT-LRFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDEARKS-  265 (516)
T ss_pred             CCCccccccCCCccHHHHHHHHHHHHHH-HHHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-
Confidence            998875431  11234444333322110 00111111111111112234445677788888888888776653221100 


Q ss_pred             CCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhccccchHHHHHHHHHHHHhChHHHHHHHHHHhHhhCC----
Q 043803          239 RDDAPNDLLDILLTVSEDESSEIKLTRENVKAFFMNIFSGGTDTSAITTEWALAELINHLDIMNKAKEEIDVVAGK----  314 (490)
Q Consensus       239 ~~~~~~d~l~~ll~~~~~~~~~~~l~~~~l~~~~~~~l~Ag~dTt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~----  314 (490)
                      .+....|+++.|++...++  +..+++++++++++++++||+|||+++++|++|+|++||++|+||++|+++++++    
T Consensus       266 ~~~~~~d~l~~ll~~~~~~--~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~  343 (516)
T PLN03195        266 GKKVKHDILSRFIELGEDP--DSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKE  343 (516)
T ss_pred             cccccccHHHHHHhccCCC--CCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhccccc
Confidence            0013569999999764321  2358999999999999999999999999999999999999999999999987642    


Q ss_pred             ----------------CCccCccccCCChhHHHHHHhhccCCCCCCCcccccccceee-cCEEeCCCCEEEeehhhccCC
Q 043803          315 ----------------NRLVEESDIANFPYLQALVKETLRLHPAGPMSVRESTENCTI-NGYEIPAKTRVFINVWSIGRD  377 (490)
Q Consensus       315 ----------------~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~~~~l-~g~~ip~G~~v~~~~~~~~~d  377 (490)
                                      ++.++++++.+||||+|||+|+||++|++|...|.+.+|.++ +||.|||||.|.++.+++|||
T Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~d  423 (516)
T PLN03195        344 EDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRM  423 (516)
T ss_pred             ccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchhhhhccCcCcCCCcEECCCCEEEEehHhhccC
Confidence                            245789999999999999999999999999998878777666 999999999999999999999


Q ss_pred             CCCC-CCCCCCCCCccccCCCCccccccCCccceecCCCCCCCCCchHHHHHHHHHHHHHHHhhceeeecCCCCccccCc
Q 043803          378 PKHW-EAPLEFRPERFIAEDGKSQLAVRGKHYHYIPFGSGRRACPGISLALHMVHSTLAAMIQCFDWKVNGGDGATVDME  456 (490)
Q Consensus       378 ~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~  456 (490)
                      |++| +||++|+||||++.+.   . ....++.|+|||+|+|+|+|++||++|++++++.|+++|++++.++  .+... 
T Consensus       424 p~~~g~dP~~F~PeRwl~~~~---~-~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~--~~~~~-  496 (516)
T PLN03195        424 EYNWGPDAASFKPERWIKDGV---F-QNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPG--HPVKY-  496 (516)
T ss_pred             hhhhccChhhcCCcccCCCCC---c-CCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCC--Cccee-
Confidence            9999 9999999999996321   0 1124567999999999999999999999999999999999998754  22222 


Q ss_pred             CCCCccccCCCCceeeccccC
Q 043803          457 EAPGLTLPRAHPLICVPAARL  477 (490)
Q Consensus       457 ~~~~~~~~~~~~~~~~~~~r~  477 (490)
                       ....+..+..+++|++++|+
T Consensus       497 -~~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        497 -RMMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             -eeeeEEecCCCEEEEEEeCC
Confidence             23344567889999998874


No 21 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=3.3e-68  Score=527.04  Aligned_cols=424  Identities=32%  Similarity=0.543  Sum_probs=339.3

Q ss_pred             CCCCCCCCccc--------------------------------ceeEEeCCHHHHHHHHHhccccccCCCccchhhh--h
Q 043803           35 PPSPLALPIIG--------------------------------LSCIVACSPETAKEILKTHETSFCDRPISATVDY--L   80 (490)
Q Consensus        35 pPgP~~~PiiG--------------------------------~~~vvv~dp~~i~~il~~~~~~f~~~~~~~~~~~--~   80 (490)
                      ||||+++|++|                                .++|+|+||+++++|+.++...|+.++.......  .
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~   80 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG   80 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence            89999999999                                6889999999999999988766765533322222  1


Q ss_pred             ccCCceeEeCCCChhHHHhHHHHHhhccchh-hhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHHHHHHH
Q 043803           81 TYGSADFAFAPYGPHWKFMKKICMTQLLGGQ-TLNQFIPIRSEEIKRFMQLMLKKAKASEAVDVGRELIRLTNNVMPRMT  159 (490)
Q Consensus        81 ~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~-~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~  159 (490)
                      ...+ ..++..+|+.|+.+|+.+ .+.|+.. .+ .+.+.+.++++.+++.+......++.+|+.++++.+++++++.++
T Consensus        81 ~~~~-~~l~~~~~~~~~~~R~~~-~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~  157 (463)
T PF00067_consen   81 PFGG-KGLFFSDGERWRRQRRLL-APAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVL  157 (463)
T ss_dssp             HHTT-TSSTTSSHHHHHHHHHHH-HHHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHH
T ss_pred             cccc-cccccccccccccccccc-cccccccccc-ccccccccccccccccccccccccceeeeeccccccccccccccc
Confidence            1222 235556689999999998 5777777 66 899999999999999999976665689999999999999999999


Q ss_pred             hccccCCCh-hhHHHHHHHHHHHHHhhccc--cccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 043803          160 MGQICSNNE-EEADEVMNLVLSIFELSGKF--NLADCIWFCKNLDLQGFGKKMKEARKRFDTMMERIIKEHEETRKTNKE  236 (490)
Q Consensus       160 fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  236 (490)
                      ||.+++..+ +...++.+.+..+.......  .+...+|+++++ +....+...++.+.+.+++.+.++++++...... 
T Consensus       158 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-  235 (463)
T PF00067_consen  158 FGKDFGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYL-PTPLFRRFKRARDRLRKYIKEIIEERREELDDGD-  235 (463)
T ss_dssp             HSSHHHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHSSS-
T ss_pred             ccceeeeccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccc-
Confidence            999988443 33456667676665543221  233445655544 3445677777889999999999999988766531 


Q ss_pred             CCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhccccchHHHHHHHHHHHHhChHHHHHHHHHHhHhhCCCC
Q 043803          237 TGRDDAPNDLLDILLTVSEDESSEIKLTRENVKAFFMNIFSGGTDTSAITTEWALAELINHLDIMNKAKEEIDVVAGKNR  316 (490)
Q Consensus       237 ~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~l~~~~~~~l~Ag~dTt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~  316 (490)
                          ....|+++.+++...+.+.+..++++++.++++.+++||+|||+.+++|++++|++||++|++|++|++.+.++++
T Consensus       236 ----~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~  311 (463)
T PF00067_consen  236 ----ESRRDLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDGR  311 (463)
T ss_dssp             ----SSCSSHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTSS
T ss_pred             ----cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence                2578999999998511111137999999999999999999999999999999999999999999999999997777


Q ss_pred             ccCccccCCChhHHHHHHhhccCCCCCCCc-ccccccceeecCEEeCCCCEEEeehhhccCCCCCCCCCCCCCCCccccC
Q 043803          317 LVEESDIANFPYLQALVKETLRLHPAGPMS-VRESTENCTINGYEIPAKTRVFINVWSIGRDPKHWEAPLEFRPERFIAE  395 (490)
Q Consensus       317 ~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~-~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~  395 (490)
                      .++.+++++||||+|||+|++|++|+++.. .|.+.+|++++||.|||||.|+++.+++|+||++|+||++|+||||++.
T Consensus       312 ~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~  391 (463)
T PF00067_consen  312 EITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDE  391 (463)
T ss_dssp             SHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTT
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            899999999999999999999999999954 4999999999999999999999999999999999999999999999987


Q ss_pred             CCCccccccCCccceecCCCCCCCCCchHHHHHHHHHHHHHHHhhceeeecCCCCccccCcCCCCccccCCCCceeec
Q 043803          396 DGKSQLAVRGKHYHYIPFGSGRRACPGISLALHMVHSTLAAMIQCFDWKVNGGDGATVDMEEAPGLTLPRAHPLICVP  473 (490)
Q Consensus       396 ~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  473 (490)
                      +.    ........|+|||.|+|.|+|++||++|+++++|+||++|+|++++++..+.  ......++.++.+++|++
T Consensus       392 ~~----~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  463 (463)
T PF00067_consen  392 RG----ISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEP--QEQQNGFLLPPKPLKVKF  463 (463)
T ss_dssp             TS----TBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGE--EECSCSSSEEESSSEEEE
T ss_pred             cc----ccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCC--ccccCceEeeCCCcEEeC
Confidence            42    1124677899999999999999999999999999999999999976532222  222213445566776653


No 22 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=1.4e-66  Score=509.90  Aligned_cols=401  Identities=20%  Similarity=0.352  Sum_probs=311.6

Q ss_pred             CCCCCCCCCCCCCCccc------------------------------ceeEEeCCHHHHHHHHHhccccccCCCccchhh
Q 043803           29 KITSNLPPSPLALPIIG------------------------------LSCIVACSPETAKEILKTHETSFCDRPISATVD   78 (490)
Q Consensus        29 ~~~~~~pPgP~~~PiiG------------------------------~~~vvv~dp~~i~~il~~~~~~f~~~~~~~~~~   78 (490)
                      +.++++||||+++|++|                              ++.++++||+++++|+.++...|..+.......
T Consensus        27 ~~r~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~  106 (463)
T PLN02774         27 YSKKGLPPGTMGWPLFGETTEFLKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSMLD  106 (463)
T ss_pred             cCCCCCCCCCCCCCchhhHHHHHHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHHH
Confidence            34558999999999999                              688999999999999987766664332222212


Q ss_pred             hhccCCceeEeCCCChhHHHhHHHHHhhccchhhhhh-hhhHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHHHHH
Q 043803           79 YLTYGSADFAFAPYGPHWKFMKKICMTQLLGGQTLNQ-FIPIRSEEIKRFMQLMLKKAKASEAVDVGRELIRLTNNVMPR  157 (490)
Q Consensus        79 ~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~-~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~  157 (490)
                      .  .++ +.++..+|+.|+.+|+.+ .+.|++..++. +.+.+.+.+++++++|.    .++++|+.+.+..+++++++.
T Consensus       107 ~--lg~-~~~~~~~g~~w~~~R~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~  178 (463)
T PLN02774        107 I--LGT-CNIAAVHGSTHRYMRGSL-LSLISPTMIRDHLLPKIDEFMRSHLSGWD----GLKTIDIQEKTKEMALLSALK  178 (463)
T ss_pred             H--hCc-cchhhcCCHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHhhC----CCCCEEeeHHHHHHHHHHHHH
Confidence            1  222 234556899999999998 68899999876 78888888888877764    246799999999999999999


Q ss_pred             HHhccccCCChhhHHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhccccC
Q 043803          158 MTMGQICSNNEEEADEVMNLVLSIFELSGKFNLADCIWFCKNLDLQGFGKKMKEARKRFDTMMERIIKEHEETRKTNKET  237 (490)
Q Consensus       158 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  237 (490)
                      ++||...+.   ....+.+.+.....  ....    +|.  ++ +....++..++.+.+.+++.+.++++++..   .  
T Consensus       179 ~~~g~~~~~---~~~~~~~~~~~~~~--~~~~----~~~--~l-p~~~~~~~~~~~~~~~~~~~~~i~~r~~~~---~--  241 (463)
T PLN02774        179 QIAGTLSKP---ISEEFKTEFFKLVL--GTLS----LPI--DL-PGTNYRSGVQARKNIVRMLRQLIQERRASG---E--  241 (463)
T ss_pred             HHcCCCChH---HHHHHHHHHHHHhc--cccc----CCc--CC-CChhhhHHHHHHHHHHHHHHHHHHHHHhcC---C--
Confidence            999986432   11222222222111  1111    111  11 111234556678888888888888775431   1  


Q ss_pred             CCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhccccchHHHHHHHHHHHHhChHHHHHHHHHHhHhhCC---
Q 043803          238 GRDDAPNDLLDILLTVSEDESSEIKLTRENVKAFFMNIFSGGTDTSAITTEWALAELINHLDIMNKAKEEIDVVAGK---  314 (490)
Q Consensus       238 ~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~l~~~~~~~l~Ag~dTt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~---  314 (490)
                          ..+|+++.|++...+   +..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++.+.+.   
T Consensus       242 ----~~~d~l~~ll~~~~~---~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~  314 (463)
T PLN02774        242 ----THTDMLGYLMRKEGN---RYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRP  314 (463)
T ss_pred             ----CcccHHHHHHhCccC---CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCC
Confidence                357999999974221   2258999999999999999999999999999999999999999999999998763   


Q ss_pred             CCccCccccCCChhHHHHHHhhccCCCCCCCcccccccceeecCEEeCCCCEEEeehhhccCCCCCCCCCCCCCCCcccc
Q 043803          315 NRLVEESDIANFPYLQALVKETLRLHPAGPMSVRESTENCTINGYEIPAKTRVFINVWSIGRDPKHWEAPLEFRPERFIA  394 (490)
Q Consensus       315 ~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~  394 (490)
                      ++.+++++++++|||+|||+|+||++|+++...|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||++
T Consensus       315 ~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~  394 (463)
T PLN02774        315 EDPIDWNDYKSMRFTRAVIFETSRLATIVNGVLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLD  394 (463)
T ss_pred             CCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCcccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCC
Confidence            34689999999999999999999999999977799999999999999999999999999999999999999999999996


Q ss_pred             CCCCccccccCCccceecCCCCCCCCCchHHHHHHHHHHHHHHHhhceeeecCCCCccccCcCCCCccccCCCCceeecc
Q 043803          395 EDGKSQLAVRGKHYHYIPFGSGRRACPGISLALHMVHSTLAAMIQCFDWKVNGGDGATVDMEEAPGLTLPRAHPLICVPA  474 (490)
Q Consensus       395 ~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  474 (490)
                      ++   .   . ....|+|||+|+|.|+|++||.+|++++++.||++|+|++.+++  +.  ....  ++.|++++.|+++
T Consensus       395 ~~---~---~-~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~--~~--~~~~--~~~p~~g~~~~~~  461 (463)
T PLN02774        395 KS---L---E-SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGD--KL--MKFP--RVEAPNGLHIRVS  461 (463)
T ss_pred             CC---c---C-CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCC--cc--ccCC--CCCCCCCceEEee
Confidence            42   1   1 12359999999999999999999999999999999999997652  21  1111  2235688888876


No 23 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=1e-66  Score=520.35  Aligned_cols=416  Identities=22%  Similarity=0.400  Sum_probs=318.0

Q ss_pred             ceeEEeCCHHHHHHHHHhccccccCCCccchhhhhccCCceeEeCCCChhHHHhHHHHHhhccchhhhhhhhhHHHHHHH
Q 043803           46 LSCIVACSPETAKEILKTHETSFCDRPISATVDYLTYGSADFAFAPYGPHWKFMKKICMTQLLGGQTLNQFIPIRSEEIK  125 (490)
Q Consensus        46 ~~~vvv~dp~~i~~il~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~  125 (490)
                      .++|+|+||+.+++||.++...|.+++........  .+.+ ++..+|+.|+.+|+.+ .+.|+...+..+.+.+.++++
T Consensus       175 ~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~--~g~~-l~~~dge~wr~rRr~l-~p~Fs~~~v~~l~~~i~~~v~  250 (633)
T PLN02738        175 KSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFV--MGKG-LIPADGEIWRVRRRAI-VPALHQKYVAAMISLFGQASD  250 (633)
T ss_pred             CCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhc--cCCc-eecCCcHHHHHHHHhc-cHhhhHHHHHHHHHHHHHHHH
Confidence            45799999999999999776667665332211111  2223 4567899999999998 699999999999999999999


Q ss_pred             HHHHHHHHHhcCCCceehHHHHHHHHHHHHHHHHhccccCCChhhHHHHHHHHHHHHHhhcccccc----cccccccccc
Q 043803          126 RFMQLMLKKAKASEAVDVGRELIRLTNNVMPRMTMGQICSNNEEEADEVMNLVLSIFELSGKFNLA----DCIWFCKNLD  201 (490)
Q Consensus       126 ~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~p~l~~l~  201 (490)
                      ++++++.+...+|+++|+...+..+++|+|+.++||.+++...+. ..+.+.+...+.......+.    ..+|.++.+ 
T Consensus       251 ~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l-  328 (633)
T PLN02738        251 RLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSND-TGIVEAVYTVLREAEDRSVSPIPVWEIPIWKDI-  328 (633)
T ss_pred             HHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccccc-hHHHHHHHHHHHHHHHHhhcchhhhhhhHHhhh-
Confidence            999999886667889999999999999999999999988753211 12223332222211110111    112222222 


Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc----CCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhh
Q 043803          202 LQGFGKKMKEARKRFDTMMERIIKEHEETRKTNKE----TGRDDAPNDLLDILLTVSEDESSEIKLTRENVKAFFMNIFS  277 (490)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~----~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~l~~~~~~~l~  277 (490)
                       +...++..+..+.+..++.++++.+++.......    ......+.|+++.|++..      ..++++++.++++++++
T Consensus       329 -~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~dil~~Ll~~~------~~ls~~~L~~e~~~ll~  401 (633)
T PLN02738        329 -SPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPSILHFLLASG------DDVSSKQLRDDLMTMLI  401 (633)
T ss_pred             -chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccchHHHHHHHcC------CCCCHHHHHHHHHHHHh
Confidence             1223445556666667777666654432211100    000123468999998752      24889999999999999


Q ss_pred             ccccchHHHHHHHHHHHHhChHHHHHHHHHHhHhhCCCCccCccccCCChhHHHHHHhhccCCCCCCCcccccccceeec
Q 043803          278 GGTDTSAITTEWALAELINHLDIMNKAKEEIDVVAGKNRLVEESDIANFPYLQALVKETLRLHPAGPMSVRESTENCTIN  357 (490)
Q Consensus       278 Ag~dTt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~~~~l~  357 (490)
                      ||+|||+.+|+|++|+|++||++|+|||+|++++++ ++.++++++++||||+|||+|+|||+|++|.+.|.+.+|.+++
T Consensus       402 AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~-~~~~t~edL~kLPYL~AVIkEtLRL~p~~p~~~R~a~~d~~i~  480 (633)
T PLN02738        402 AGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLG-DRFPTIEDMKKLKYTTRVINESLRLYPQPPVLIRRSLENDMLG  480 (633)
T ss_pred             cCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcC-CCCCCHHHHccCHHHHHHHHHHHhcCCCccccceeeccCceEC
Confidence            999999999999999999999999999999999987 4678999999999999999999999999999889999999999


Q ss_pred             CEEeCCCCEEEeehhhccCCCCCCCCCCCCCCCccccCCCCccccccCCccceecCCCCCCCCCchHHHHHHHHHHHHHH
Q 043803          358 GYEIPAKTRVFINVWSIGRDPKHWEAPLEFRPERFIAEDGKSQLAVRGKHYHYIPFGSGRRACPGISLALHMVHSTLAAM  437 (490)
Q Consensus       358 g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~l  437 (490)
                      ||.|||||.|+++.+.+||||++||||++|+||||+......  ......+.|+|||.|+|+|+|++||.+|+++++|+|
T Consensus       481 gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~--~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~L  558 (633)
T PLN02738        481 GYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNP--NETNQNFSYLPFGGGPRKCVGDMFASFENVVATAML  558 (633)
T ss_pred             CEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCc--cccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999998532101  112345789999999999999999999999999999


Q ss_pred             HhhceeeecCCCCccccCcCCCCccccCCCCceeeccccCCCc
Q 043803          438 IQCFDWKVNGGDGATVDMEEAPGLTLPRAHPLICVPAARLNPF  480 (490)
Q Consensus       438 l~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~  480 (490)
                      +++|+|++.++. .+.  ....+.++.++.++.|++++|.+..
T Consensus       559 lr~F~~el~~~~-~~~--~~~~~~~~~p~~~l~v~l~~R~~~~  598 (633)
T PLN02738        559 VRRFDFQLAPGA-PPV--KMTTGATIHTTEGLKMTVTRRTKPP  598 (633)
T ss_pred             HHhCeeEeCCCC-CCc--ccccceEEeeCCCcEEEEEECCCCC
Confidence            999999997652 222  2233456667889999999997654


No 24 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=1.4e-66  Score=509.52  Aligned_cols=400  Identities=20%  Similarity=0.309  Sum_probs=316.0

Q ss_pred             cCCCCCCCCCCCCCCCccc-------------------------------ceeEEeCCHHHHHHHHHhccccccCCCccc
Q 043803           27 RSKITSNLPPSPLALPIIG-------------------------------LSCIVACSPETAKEILKTHETSFCDRPISA   75 (490)
Q Consensus        27 ~~~~~~~~pPgP~~~PiiG-------------------------------~~~vvv~dp~~i~~il~~~~~~f~~~~~~~   75 (490)
                      ...++.+.||||+++|++|                               ++.|+++||+++++|+.++.+.|..  ...
T Consensus        29 ~~~~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~~--~~~  106 (463)
T PLN02196         29 SSSTKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFKP--TFP  106 (463)
T ss_pred             CCCCCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCcccc--cCc
Confidence            3345668899999999999                               6899999999999999877666632  221


Q ss_pred             hhhhhccCCceeEeCCCChhHHHhHHHHHhhccchhhhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHHH
Q 043803           76 TVDYLTYGSADFAFAPYGPHWKFMKKICMTQLLGGQTLNQFIPIRSEEIKRFMQLMLKKAKASEAVDVGRELIRLTNNVM  155 (490)
Q Consensus        76 ~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi  155 (490)
                      .......+. ..++..+|+.|+++||.+ .+.|+++.++.+.+.++++++++++.|.     ++++|+.++++.++++++
T Consensus       107 ~~~~~~~g~-~~l~~~~g~~w~~~Rk~l-~~~f~~~~l~~~~~~i~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~v~  179 (463)
T PLN02196        107 ASKERMLGK-QAIFFHQGDYHAKLRKLV-LRAFMPDAIRNMVPDIESIAQESLNSWE-----GTQINTYQEMKTYTFNVA  179 (463)
T ss_pred             hHHHHHcCc-ccccccCcHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHcCC-----CCeEEeHHHHHHHHHHHH
Confidence            111122232 345567899999999998 5889999999999999999999988763     457999999999999999


Q ss_pred             HHHHhccccCCChhhHHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 043803          156 PRMTMGQICSNNEEEADEVMNLVLSIFELSGKFNLADCIWFCKNLDLQGFGKKMKEARKRFDTMMERIIKEHEETRKTNK  235 (490)
Q Consensus       156 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  235 (490)
                      +.++||.+.....   ..+.+.....    ...  ...+|+.  + +....++..++.+.+.+++.+.++++++..    
T Consensus       180 ~~~~fG~~~~~~~---~~~~~~~~~~----~~~--~~~~~~~--~-p~~~~~~~~~a~~~~~~~~~~~i~~~~~~~----  243 (463)
T PLN02196        180 LLSIFGKDEVLYR---EDLKRCYYIL----EKG--YNSMPIN--L-PGTLFHKSMKARKELAQILAKILSKRRQNG----  243 (463)
T ss_pred             HHHHcCCCCchHH---HHHHHHHHHH----hcc--hhccccc--C-CCccchHHHHHHHHHHHHHHHHHHHHhhcC----
Confidence            9999998753211   1122211111    110  1112221  1 112234566777888888888887765431    


Q ss_pred             cCCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhccccchHHHHHHHHHHHHhChHHHHHHHHHHhHhhCC-
Q 043803          236 ETGRDDAPNDLLDILLTVSEDESSEIKLTRENVKAFFMNIFSGGTDTSAITTEWALAELINHLDIMNKAKEEIDVVAGK-  314 (490)
Q Consensus       236 ~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~l~~~~~~~l~Ag~dTt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~-  314 (490)
                           ....|+++.+++.      ...++++++.++++++++||+|||+++++|++++|++||++|+++++|++++.+. 
T Consensus       244 -----~~~~d~l~~ll~~------~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~  312 (463)
T PLN02196        244 -----SSHNDLLGSFMGD------KEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDK  312 (463)
T ss_pred             -----CCcccHHHHHHhc------CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhccc
Confidence                 1356899998863      1248999999999999999999999999999999999999999999999988764 


Q ss_pred             --CCccCccccCCChhHHHHHHhhccCCCCCCCcccccccceeecCEEeCCCCEEEeehhhccCCCCCCCCCCCCCCCcc
Q 043803          315 --NRLVEESDIANFPYLQALVKETLRLHPAGPMSVRESTENCTINGYEIPAKTRVFINVWSIGRDPKHWEAPLEFRPERF  392 (490)
Q Consensus       315 --~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~  392 (490)
                        ++.+++++++++|||+|||+|+||++|++++..|.+.+|++++||.||||+.|+++.+++|||+++|+||++|+||||
T Consensus       313 ~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRf  392 (463)
T PLN02196        313 EEGESLTWEDTKKMPLTSRVIQETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRF  392 (463)
T ss_pred             ccCCCCCHHHHhcChHHHHHHHHHHhcCCCccccceeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhh
Confidence              356889999999999999999999999999988999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCccccccCCccceecCCCCCCCCCchHHHHHHHHHHHHHHHhhceeeecCCCCccccCcCCCCccccCCCCceee
Q 043803          393 IAEDGKSQLAVRGKHYHYIPFGSGRRACPGISLALHMVHSTLAAMIQCFDWKVNGGDGATVDMEEAPGLTLPRAHPLICV  472 (490)
Q Consensus       393 l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  472 (490)
                      +...         .+..++|||.|+|.|+|+++|++|++++++.|+++|+|+++++.   .++.  ...+..|..++.|+
T Consensus       393 l~~~---------~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~---~~~~--~~~~~~p~~~~~~~  458 (463)
T PLN02196        393 EVAP---------KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTS---NGIQ--YGPFALPQNGLPIA  458 (463)
T ss_pred             cCCC---------CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCC---CceE--EcccccCCCCceEE
Confidence            8631         34679999999999999999999999999999999999987641   2222  23334577888888


Q ss_pred             cccc
Q 043803          473 PAAR  476 (490)
Q Consensus       473 ~~~r  476 (490)
                      ++++
T Consensus       459 ~~~~  462 (463)
T PLN02196        459 LSRK  462 (463)
T ss_pred             EecC
Confidence            8754


No 25 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=8.7e-66  Score=505.82  Aligned_cols=402  Identities=23%  Similarity=0.343  Sum_probs=313.4

Q ss_pred             EEeCCHHHHHHHHHhccccccCCCccc-hhhhhccCCceeEeCCCChhHHHhHHHHHhhccchhhhhhhh--hHHHHHHH
Q 043803           49 IVACSPETAKEILKTHETSFCDRPISA-TVDYLTYGSADFAFAPYGPHWKFMKKICMTQLLGGQTLNQFI--PIRSEEIK  125 (490)
Q Consensus        49 vvv~dp~~i~~il~~~~~~f~~~~~~~-~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~--~~i~~~~~  125 (490)
                      ++++||+++++|+..+...|.+..... ..... . +.+ +++.+|+.|+++||.+ ++.|+...++.+.  +.+.+.++
T Consensus        86 iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~-~-g~g-i~~~~g~~wk~~Rk~l-~~~fs~~~l~~~~~~~~~~~~~~  161 (502)
T PLN02426         86 TITANPENVEYMLKTRFDNYPKGKPFSAILGDL-L-GRG-IFNVDGDSWRFQRKMA-SLELGSVSIRSYAFEIVASEIES  161 (502)
T ss_pred             EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHh-c-CCc-eeecCcHHHHHHHHHh-HhhhhhHHHHHHHHHHHHHHHHH
Confidence            899999999999988766776543221 11111 1 223 5667899999999998 7999999988763  67777788


Q ss_pred             HHHHHHHHHhcC--CCceehHHHHHHHHHHHHHHHHhccccCCChh--hHHHHHHHHHHHHHhhccccccccccc---cc
Q 043803          126 RFMQLMLKKAKA--SEAVDVGRELIRLTNNVMPRMTMGQICSNNEE--EADEVMNLVLSIFELSGKFNLADCIWF---CK  198 (490)
Q Consensus       126 ~l~~~l~~~~~~--~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~---l~  198 (490)
                      .+++.+.+.++.  +.++|+.++++.+++|+++.++||.+++..+.  ...++.+.++.+...... ......|+   +.
T Consensus       162 ~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  240 (502)
T PLN02426        162 RLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDPGCLELSLPISEFADAFDTASKLSAE-RAMAASPLLWKIK  240 (502)
T ss_pred             HHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCCcccCCCCCccHHHHHHHHHHHHHHH-HHhcchhHHHHHH
Confidence            888888765422  46899999999999999999999998875432  223455555444322111 11111122   21


Q ss_pred             cccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhc
Q 043803          199 NLDLQGFGKKMKEARKRFDTMMERIIKEHEETRKTNKETGRDDAPNDLLDILLTVSEDESSEIKLTRENVKAFFMNIFSG  278 (490)
Q Consensus       199 ~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~l~~~~~~~l~A  278 (490)
                      .+...+..+++.++.+.+.+++.++|+++++...        ....|+++.+++..        .+++++.++++++++|
T Consensus       241 ~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~--------~~~~dll~~ll~~~--------~~~~~l~~~~~~~l~A  304 (502)
T PLN02426        241 RLLNIGSERKLKEAIKLVDELAAEVIRQRRKLGF--------SASKDLLSRFMASI--------NDDKYLRDIVVSFLLA  304 (502)
T ss_pred             HhcccchhHHHHHHHHHHHHHHHHHHHHHHhccc--------CCcchHHHHHHhcC--------CCHHHHHHHHHHHHHh
Confidence            1112234566777888899999999988765321        13579999999752        2578999999999999


Q ss_pred             cccchHHHHHHHHHHHHhChHHHHHHHHHHhHhhCCC-CccCccccCCChhHHHHHHhhccCCCCCCCcccccccceee-
Q 043803          279 GTDTSAITTEWALAELINHLDIMNKAKEEIDVVAGKN-RLVEESDIANFPYLQALVKETLRLHPAGPMSVRESTENCTI-  356 (490)
Q Consensus       279 g~dTt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~-~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~~~~l-  356 (490)
                      |+|||+++|+|++|+|++||++|+||++|++.+.+.+ ..++++++++||||+|||+|+||++||+|...|.+.+|.++ 
T Consensus       305 G~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~~~l~~LpYl~avi~EtLRl~p~v~~~~r~~~~d~~~~  384 (502)
T PLN02426        305 GRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFEEMKEMHYLHAALYESMRLFPPVQFDSKFAAEDDVLP  384 (502)
T ss_pred             ccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCHHHHhcChHHHHHHHHHHhCCCCCCCcceeeccCCCcC
Confidence            9999999999999999999999999999999988753 36899999999999999999999999999888999999888 


Q ss_pred             cCEEeCCCCEEEeehhhccCCCCCC-CCCCCCCCCccccCCCCccccccCCccceecCCCCCCCCCchHHHHHHHHHHHH
Q 043803          357 NGYEIPAKTRVFINVWSIGRDPKHW-EAPLEFRPERFIAEDGKSQLAVRGKHYHYIPFGSGRRACPGISLALHMVHSTLA  435 (490)
Q Consensus       357 ~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~  435 (490)
                      +||.|||||.|.++.+++||||++| |||++|+||||++++   .. ....++.++|||+|+|+|+|++||.+|++++++
T Consensus       385 ~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~---~~-~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la  460 (502)
T PLN02426        385 DGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNG---VF-VPENPFKYPVFQAGLRVCLGKEMALMEMKSVAV  460 (502)
T ss_pred             CCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCC---Cc-CCCCCcccCCCCCCCCCCccHHHHHHHHHHHHH
Confidence            8999999999999999999999999 999999999999732   10 112456789999999999999999999999999


Q ss_pred             HHHhhceeeecCCCCccccCcCCCCccccCCCCceeeccccC
Q 043803          436 AMIQCFDWKVNGGDGATVDMEEAPGLTLPRAHPLICVPAARL  477 (490)
Q Consensus       436 ~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  477 (490)
                      +|+++|+++++++....  .....++++.+..++.|++++|.
T Consensus       461 ~ll~~f~~~~~~~~~~~--~~~~~~~~~~~~~gl~v~~~~r~  500 (502)
T PLN02426        461 AVVRRFDIEVVGRSNRA--PRFAPGLTATVRGGLPVRVRERV  500 (502)
T ss_pred             HHHHHceEEEecCCCCC--CcccceeEEecCCCEEEEEEEcc
Confidence            99999999986542111  12234567788889999999885


No 26 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=8.7e-65  Score=503.57  Aligned_cols=411  Identities=23%  Similarity=0.331  Sum_probs=318.0

Q ss_pred             CCCCCCCCCCCCCCCccc-------------------------------------ceeEEeCCHHHHHHHHHhccccccC
Q 043803           28 SKITSNLPPSPLALPIIG-------------------------------------LSCIVACSPETAKEILKTHETSFCD   70 (490)
Q Consensus        28 ~~~~~~~pPgP~~~PiiG-------------------------------------~~~vvv~dp~~i~~il~~~~~~f~~   70 (490)
                      ..++.++||||+++|++|                                     .+.|+++||+++++|+.++ +.|.+
T Consensus        37 ~~~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~  115 (490)
T PLN02302         37 GEGQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEP  115 (490)
T ss_pred             ccCCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-Ccccc
Confidence            345568999999999999                                     4779999999999999866 45654


Q ss_pred             CCccchhhhhccCCceeEeCCCChhHHHhHHHHHhhcc-chhhhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHHHH
Q 043803           71 RPISATVDYLTYGSADFAFAPYGPHWKFMKKICMTQLL-GGQTLNQFIPIRSEEIKRFMQLMLKKAKASEAVDVGRELIR  149 (490)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f-~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~  149 (490)
                      +........  .+. +.++..+|+.|+++||.+ .+.| +++.++.+.+.+.++++++++.+..    ++.+|+.+.++.
T Consensus       116 ~~~~~~~~~--~g~-~~~~~~~g~~w~~~R~~~-~~~f~~~~~l~~~~~~i~~~v~~~~~~~~~----~~~v~~~~~~~~  187 (490)
T PLN02302        116 GWPESTVEL--IGR-KSFVGITGEEHKRLRRLT-AAPVNGPEALSTYIPYIEENVKSCLEKWSK----MGEIEFLTELRK  187 (490)
T ss_pred             CCchhHHHH--hcc-ccccccCcHHHHHHHHHH-HhccCCHHHHHHHHHHHHHHHHHHHHHhcC----CCCEehHHHHHH
Confidence            432221121  222 334556799999999998 4667 5788999999999999999998753    346999999999


Q ss_pred             HHHHHHHHHHhccccCCChhhHHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 043803          150 LTNNVMPRMTMGQICSNNEEEADEVMNLVLSIFELSGKFNLADCIWFCKNLDLQGFGKKMKEARKRFDTMMERIIKEHEE  229 (490)
Q Consensus       150 ~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  229 (490)
                      ++++++++++||.+.+...   ..+............  .+...+|.       ....+..++.+.+.+++.+.++++++
T Consensus       188 ~~~~vi~~~~~G~~~~~~~---~~~~~~~~~~~~~~~--~~~~~~p~-------~~~~~~~~~~~~l~~~~~~~i~~~~~  255 (490)
T PLN02302        188 LTFKIIMYIFLSSESELVM---EALEREYTTLNYGVR--AMAINLPG-------FAYHRALKARKKLVALFQSIVDERRN  255 (490)
T ss_pred             HHHHHHHHHHcCCCChHHH---HHHHHHHHHHHHHhh--hCCcCCCc-------hhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999998764321   222221111111110  01101111       12234445677888888888888765


Q ss_pred             hhhccccCCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhccccchHHHHHHHHHHHHhChHHHHHHHHHHh
Q 043803          230 TRKTNKETGRDDAPNDLLDILLTVSEDESSEIKLTRENVKAFFMNIFSGGTDTSAITTEWALAELINHLDIMNKAKEEID  309 (490)
Q Consensus       230 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~l~~~~~~~l~Ag~dTt~~~l~~~l~~L~~~p~~q~~l~~Ei~  309 (490)
                      ....+.    .....|+++.|++...++  +..+++++++++++++++||+|||+++++|++++|++||++|+|+++|++
T Consensus       256 ~~~~~~----~~~~~d~l~~ll~~~~~~--~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~  329 (490)
T PLN02302        256 SRKQNI----SPRKKDMLDLLLDAEDEN--GRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQE  329 (490)
T ss_pred             hhhccC----CCCcCCHHHHHHhhhccC--CCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            433211    024579999999864322  23589999999999999999999999999999999999999999999999


Q ss_pred             HhhCCC---C-ccCccccCCChhHHHHHHhhccCCCCCCCcccccccceeecCEEeCCCCEEEeehhhccCCCCCCCCCC
Q 043803          310 VVAGKN---R-LVEESDIANFPYLQALVKETLRLHPAGPMSVRESTENCTINGYEIPAKTRVFINVWSIGRDPKHWEAPL  385 (490)
Q Consensus       310 ~~~~~~---~-~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~  385 (490)
                      ++.+..   . .+++++++++|||+|||+|++|++|++|...|.+.+|++++||.||||+.|.++.+++||||++|+||+
T Consensus       330 ~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~  409 (490)
T PLN02302        330 EIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTVFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPK  409 (490)
T ss_pred             HHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccchhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCcc
Confidence            987642   1 378999999999999999999999999988899999999999999999999999999999999999999


Q ss_pred             CCCCCccccCCCCccccccCCccceecCCCCCCCCCchHHHHHHHHHHHHHHHhhceeeecCCCCccccCcCCCCccccC
Q 043803          386 EFRPERFIAEDGKSQLAVRGKHYHYIPFGSGRRACPGISLALHMVHSTLAAMIQCFDWKVNGGDGATVDMEEAPGLTLPR  465 (490)
Q Consensus       386 ~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  465 (490)
                      +|+||||++..        ..+..++|||+|+|.|+|++||.+|+++++++|+++|+|++.+++ .  ++.  ......|
T Consensus       410 ~F~PeR~~~~~--------~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~--~~~--~~~~~~p  476 (490)
T PLN02302        410 EFDPSRWDNYT--------PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPG-C--KVM--YLPHPRP  476 (490)
T ss_pred             ccChhhcCCCC--------CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCC-C--cce--eCCCCCC
Confidence            99999999642        234679999999999999999999999999999999999987541 1  222  2223567


Q ss_pred             CCCceeeccccCC
Q 043803          466 AHPLICVPAARLN  478 (490)
Q Consensus       466 ~~~~~~~~~~r~~  478 (490)
                      ..++.+++++|.+
T Consensus       477 ~~~~~~~~~~~~~  489 (490)
T PLN02302        477 KDNCLARITKVAS  489 (490)
T ss_pred             CCCceEEEEeccC
Confidence            7899999988764


No 27 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=6.9e-65  Score=496.84  Aligned_cols=409  Identities=20%  Similarity=0.274  Sum_probs=314.8

Q ss_pred             CCCCCCCCCCCCCCccc-----------------------------------ceeEEeCCHHHHHHHHHhccccccCCCc
Q 043803           29 KITSNLPPSPLALPIIG-----------------------------------LSCIVACSPETAKEILKTHETSFCDRPI   73 (490)
Q Consensus        29 ~~~~~~pPgP~~~PiiG-----------------------------------~~~vvv~dp~~i~~il~~~~~~f~~~~~   73 (490)
                      ++++++||||+++|++|                                   .+.|+++||++++++|.++...|+.+..
T Consensus         3 ~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~   82 (452)
T PLN03141          3 KKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYP   82 (452)
T ss_pred             CCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCc
Confidence            45778999999999999                                   6889999999999999988777765432


Q ss_pred             cchhhhhccCCceeEeCCCChhHHHhHHHHHhhccchhhhhh-hhhHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHH
Q 043803           74 SATVDYLTYGSADFAFAPYGPHWKFMKKICMTQLLGGQTLNQ-FIPIRSEEIKRFMQLMLKKAKASEAVDVGRELIRLTN  152 (490)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~-~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~  152 (490)
                      . ..... .|. +.++..+|+.|+++|+.+ .+.|+...+.. +.+.+.+.++++++.+.    .++++|+.+.++.+++
T Consensus        83 ~-~~~~l-~g~-~~~~~~~g~~wr~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~  154 (452)
T PLN03141         83 K-SLTEL-MGK-SSILLINGSLQRRVHGLI-GAFLKSPHLKAQITRDMERYVSESLDSWR----DDPPVLVQDETKKIAF  154 (452)
T ss_pred             h-hHHHH-hCc-ccccccCcHHHHHHHHHH-HHhcCcHHHHHHHHHHHHHHHHHHHHhcc----CCCCEEhHHHHHHHHH
Confidence            1 12222 222 345666899999999998 57787777765 34555555555555442    3568999999999999


Q ss_pred             HHHHHHHhccccCCChhhHHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 043803          153 NVMPRMTMGQICSNNEEEADEVMNLVLSIFELSGKFNLADCIWFCKNLDLQGFGKKMKEARKRFDTMMERIIKEHEETRK  232 (490)
Q Consensus       153 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  232 (490)
                      ++++.++||.+.+.   ....+.+.+..+.....      .+|..  + +.....+..++.+.+.+++.+.++++++...
T Consensus       155 ~vi~~~~~G~~~~~---~~~~~~~~~~~~~~~~~------~~~~~--~-p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~  222 (452)
T PLN03141        155 EVLVKALISLEPGE---EMEFLKKEFQEFIKGLM------SLPIK--L-PGTRLYRSLQAKKRMVKLVKKIIEEKRRAMK  222 (452)
T ss_pred             HHHHHHHcCCCchH---HHHHHHHHHHHHhhhHH------hCccC--C-CchHhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999976532   22233333333222111      11211  1 1111234456788899999999988876543


Q ss_pred             ccccCCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhccccchHHHHHHHHHHHHhChHHHHHHHHHHhHhh
Q 043803          233 TNKETGRDDAPNDLLDILLTVSEDESSEIKLTRENVKAFFMNIFSGGTDTSAITTEWALAELINHLDIMNKAKEEIDVVA  312 (490)
Q Consensus       233 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~l~~~~~~~l~Ag~dTt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~  312 (490)
                      .+.. .......|+++.++++.     +..+++++++.+++++++||+|||+.+++|++++|++||++|+++++|++++.
T Consensus       223 ~~~~-~~~~~~~d~l~~ll~~~-----~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~  296 (452)
T PLN03141        223 NKEE-DETGIPKDVVDVLLRDG-----SDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLK  296 (452)
T ss_pred             ccCc-cccCChhhHHHHHHhcC-----CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHH
Confidence            2110 00012468999998763     12489999999999999999999999999999999999999999999998875


Q ss_pred             C----CCCccCccccCCChhHHHHHHhhccCCCCCCCcccccccceeecCEEeCCCCEEEeehhhccCCCCCCCCCCCCC
Q 043803          313 G----KNRLVEESDIANFPYLQALVKETLRLHPAGPMSVRESTENCTINGYEIPAKTRVFINVWSIGRDPKHWEAPLEFR  388 (490)
Q Consensus       313 ~----~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~  388 (490)
                      +    .++.++.+++.++|||+|||+|++|++|+++...|.+.+|++++||.||||+.|+++.+++|+|+++|+||++|+
T Consensus       297 ~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~  376 (452)
T PLN03141        297 RLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGVMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFN  376 (452)
T ss_pred             hccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCcceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccC
Confidence            3    244678999999999999999999999999877799999999999999999999999999999999999999999


Q ss_pred             CCccccCCCCccccccCCccceecCCCCCCCCCchHHHHHHHHHHHHHHHhhceeeecCCCCccccCcCCCCccccCCCC
Q 043803          389 PERFIAEDGKSQLAVRGKHYHYIPFGSGRRACPGISLALHMVHSTLAAMIQCFDWKVNGGDGATVDMEEAPGLTLPRAHP  468 (490)
Q Consensus       389 P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  468 (490)
                      ||||++.+        ..+..|+|||+|+|.|+|++||.+|+++++|.|+++|+|+++++.  ..   .  ..++.+..+
T Consensus       377 PeRfl~~~--------~~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~--~~---~--~~~~~~~~~  441 (452)
T PLN03141        377 PWRWQEKD--------MNNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDT--IV---N--FPTVRMKRK  441 (452)
T ss_pred             cccccCCC--------CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCC--ee---e--cccccCCCC
Confidence            99999742        135679999999999999999999999999999999999986542  11   1  135567789


Q ss_pred             ceeeccccCC
Q 043803          469 LICVPAARLN  478 (490)
Q Consensus       469 ~~~~~~~r~~  478 (490)
                      +.|++++|++
T Consensus       442 ~~~~~~~~~~  451 (452)
T PLN03141        442 LPIWVTRIDD  451 (452)
T ss_pred             ceEEEEeCCC
Confidence            9999999854


No 28 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=4.8e-64  Score=489.67  Aligned_cols=406  Identities=20%  Similarity=0.276  Sum_probs=309.1

Q ss_pred             CCCCCCCCCCCCCCccc-----------------------------------ceeEEeCCHHHHHHHHHhccccccCCCc
Q 043803           29 KITSNLPPSPLALPIIG-----------------------------------LSCIVACSPETAKEILKTHETSFCDRPI   73 (490)
Q Consensus        29 ~~~~~~pPgP~~~PiiG-----------------------------------~~~vvv~dp~~i~~il~~~~~~f~~~~~   73 (490)
                      ..+.++||||+++|++|                                   ++.|+++||+++++++.++...|.++..
T Consensus        26 ~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~  105 (472)
T PLN02987         26 YRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSYP  105 (472)
T ss_pred             cCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecCc
Confidence            45557899999999998                                   5789999999999999988777755432


Q ss_pred             cchhhhhccCCceeEeCCCChhHHHhHHHHHhhccchhhhhhhhhHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHH
Q 043803           74 SATVDYLTYGSADFAFAPYGPHWKFMKKICMTQLLGGQTLNQFIPIRSEEIKRFMQLMLKKAKASEAVDVGRELIRLTNN  153 (490)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~  153 (490)
                      ......+  |+.+ ++..+|+.|+++|+++ .++++.+.+..+.   ..++.+++.......  ++++++.+.++.++++
T Consensus       106 ~~~~~~l--g~~~-l~~~~g~~wr~~R~~~-~~f~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~v~~~~~~~~~t~~  176 (472)
T PLN02987        106 GSISNLL--GKHS-LLLMKGNLHKKMHSLT-MSFANSSIIKDHL---LLDIDRLIRFNLDSW--SSRVLLMEEAKKITFE  176 (472)
T ss_pred             HHHHHHh--Cccc-ccccCcHHHHHHHHHH-HHhcChHHHHHHH---HHHHHHHHHHHHHhh--ccceehHHHHHHHHHH
Confidence            2222222  3223 4445799999999997 4555545544432   122333333222211  1479999999999999


Q ss_pred             HHHHHHhccccCCChhhHHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 043803          154 VMPRMTMGQICSNNEEEADEVMNLVLSIFELSGKFNLADCIWFCKNLDLQGFGKKMKEARKRFDTMMERIIKEHEETRKT  233 (490)
Q Consensus       154 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  233 (490)
                      ++++++||.+.+...   ..+.+.+.......    +...+|++     ....++..+.++.+.+++.+.++++++....
T Consensus       177 vi~~~~fg~~~~~~~---~~~~~~~~~~~~~~----~~~~~p~l-----~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~  244 (472)
T PLN02987        177 LTVKQLMSFDPGEWT---ESLRKEYVLVIEGF----FSVPLPLF-----STTYRRAIQARTKVAEALTLVVMKRRKEEEE  244 (472)
T ss_pred             HHHHHHcCCCChHHH---HHHHHHHHHHHhhh----hcCCCcCC-----CchHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence            999999997654221   22222222211111    11223432     1235667778899999999999888765332


Q ss_pred             cccCCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhccccchHHHHHHHHHHHHhChHHHHHHHHHHhHhhC
Q 043803          234 NKETGRDDAPNDLLDILLTVSEDESSEIKLTRENVKAFFMNIFSGGTDTSAITTEWALAELINHLDIMNKAKEEIDVVAG  313 (490)
Q Consensus       234 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~l~~~~~~~l~Ag~dTt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~  313 (490)
                      +.     ....|+++.|++..      .+++++++++++.++++||+|||+.+++|++++|++||++|+++++|++.+.+
T Consensus       245 ~~-----~~~~d~l~~ll~~~------~~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~  313 (472)
T PLN02987        245 GA-----EKKKDMLAALLASD------DGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRA  313 (472)
T ss_pred             cC-----cccccHHHHHHhcC------CCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHc
Confidence            11     13579999999752      14899999999999999999999999999999999999999999999998875


Q ss_pred             C---CCccCccccCCChhHHHHHHhhccCCCCCCCcccccccceeecCEEeCCCCEEEeehhhccCCCCCCCCCCCCCCC
Q 043803          314 K---NRLVEESDIANFPYLQALVKETLRLHPAGPMSVRESTENCTINGYEIPAKTRVFINVWSIGRDPKHWEAPLEFRPE  390 (490)
Q Consensus       314 ~---~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~  390 (490)
                      .   +..++++++.++||++||++|++|++|+++...|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+||
T Consensus       314 ~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~Pe  393 (472)
T PLN02987        314 MKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGIFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPW  393 (472)
T ss_pred             ccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCccccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcc
Confidence            2   3457889999999999999999999999987779999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCccccccCCccceecCCCCCCCCCchHHHHHHHHHHHHHHHhhceeeecCCCCccccCcCCCCccccCCCCce
Q 043803          391 RFIAEDGKSQLAVRGKHYHYIPFGSGRRACPGISLALHMVHSTLAAMIQCFDWKVNGGDGATVDMEEAPGLTLPRAHPLI  470 (490)
Q Consensus       391 R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  470 (490)
                      ||++.++.     ......++|||+|+|.|+|++||.+|++++++.|+++|+|++++++  +..    +..++.|..++.
T Consensus       394 Rfl~~~~~-----~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~----~~~~~~p~~~~~  462 (472)
T PLN02987        394 RWQSNSGT-----TVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQD--KLV----FFPTTRTQKRYP  462 (472)
T ss_pred             cCCCCCCC-----CCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCC--cee----ecccccCCCCce
Confidence            99975311     1234679999999999999999999999999999999999987652  221    123667888999


Q ss_pred             eeccccC
Q 043803          471 CVPAARL  477 (490)
Q Consensus       471 ~~~~~r~  477 (490)
                      +++++|.
T Consensus       463 ~~~~~r~  469 (472)
T PLN02987        463 INVKRRD  469 (472)
T ss_pred             EEEEecc
Confidence            9999884


No 29 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=1.1e-64  Score=499.03  Aligned_cols=415  Identities=22%  Similarity=0.370  Sum_probs=316.3

Q ss_pred             ceeEEeCCHHHHHHHHHhccccccCCCccchhhhhccCCceeEeCCCChhHHHhHHHHHhhccchhhhhhhhh-HHHHHH
Q 043803           46 LSCIVACSPETAKEILKTHETSFCDRPISATVDYLTYGSADFAFAPYGPHWKFMKKICMTQLLGGQTLNQFIP-IRSEEI  124 (490)
Q Consensus        46 ~~~vvv~dp~~i~~il~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~-~i~~~~  124 (490)
                      .+.|+++||+++++|+++....|.+++........ .+ .+ ++..+|+.|+++||.+ .+.|+...+..+.+ .+.+++
T Consensus        60 ~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~~~-~~-~~-i~~~~g~~wk~~Rk~l-~~~f~~~~l~~~~~~~~~~~~  135 (489)
T PLN02936         60 RNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSEFL-FG-SG-FAIAEGELWTARRRAV-VPSLHRRYLSVMVDRVFCKCA  135 (489)
T ss_pred             ccEEEEcCHHHHHHHHHhccccccCcchhhhhHHH-hc-Cc-cccCCchHHHHHHHhh-cCccCHHHHHHHHHHHHHHHH
Confidence            57899999999999998776777665432221111 22 23 4556799999999998 68999888887654 788899


Q ss_pred             HHHHHHHHHHhcCCCceehHHHHHHHHHHHHHHHHhccccCCChhhHHHHHHHHHHHHHhhcccccccccccccc--c-c
Q 043803          125 KRFMQLMLKKAKASEAVDVGRELIRLTNNVMPRMTMGQICSNNEEEADEVMNLVLSIFELSGKFNLADCIWFCKN--L-D  201 (490)
Q Consensus       125 ~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~--l-~  201 (490)
                      +.+++.+.+...+++++|+.++++.+++++++.++||.+++..+.. .++...+...+..... .....+|++..  + .
T Consensus       136 ~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~l~~  213 (489)
T PLN02936        136 ERLVEKLEPVALSGEAVNMEAKFSQLTLDVIGLSVFNYNFDSLTTD-SPVIQAVYTALKEAET-RSTDLLPYWKVDFLCK  213 (489)
T ss_pred             HHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHHcCCCccccccC-cHHHHHHHHHHHHHHH-hhhccchHHhhHHHhc
Confidence            9999999887656789999999999999999999999998754322 2233333333222211 11122332211  0 0


Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHhhhccccC---C--CCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHh
Q 043803          202 LQGFGKKMKEARKRFDTMMERIIKEHEETRKTNKET---G--RDDAPNDLLDILLTVSEDESSEIKLTRENVKAFFMNIF  276 (490)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~--~~~~~~d~l~~ll~~~~~~~~~~~l~~~~l~~~~~~~l  276 (490)
                      ..+..++..++.+.+.+++.+.++++++..+.....   .  ......|+++.|++..      ..++.+++.+++++++
T Consensus       214 ~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~------~~~~~~~i~~~~~~~~  287 (489)
T PLN02936        214 ISPRQIKAEKAVTVIRETVEDLVDKCKEIVEAEGEVIEGEEYVNDSDPSVLRFLLASR------EEVSSVQLRDDLLSML  287 (489)
T ss_pred             cChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccCchHHHHHHHhcc------ccCCHHHHHHHHHHHH
Confidence            112344566778888888888888776543211100   0  0013468999998752      1388999999999999


Q ss_pred             hccccchHHHHHHHHHHHHhChHHHHHHHHHHhHhhCCCCccCccccCCChhHHHHHHhhccCCCCCCCcc-ccccccee
Q 043803          277 SGGTDTSAITTEWALAELINHLDIMNKAKEEIDVVAGKNRLVEESDIANFPYLQALVKETLRLHPAGPMSV-RESTENCT  355 (490)
Q Consensus       277 ~Ag~dTt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~-R~~~~~~~  355 (490)
                      +||+|||+++|+|++|+|++||++|+++++|++++++. +.++++++++||||+|||+|+||++|++|.+. |.+.+|+.
T Consensus       288 ~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~  366 (489)
T PLN02936        288 VAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVL  366 (489)
T ss_pred             HHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccc
Confidence            99999999999999999999999999999999999874 45789999999999999999999999999888 55567777


Q ss_pred             ecCEEeCCCCEEEeehhhccCCCCCCCCCCCCCCCccccCCCCccccccCCccceecCCCCCCCCCchHHHHHHHHHHHH
Q 043803          356 INGYEIPAKTRVFINVWSIGRDPKHWEAPLEFRPERFIAEDGKSQLAVRGKHYHYIPFGSGRRACPGISLALHMVHSTLA  435 (490)
Q Consensus       356 l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~  435 (490)
                      ++||.||||+.|+++.+++||||++|+||++|+||||+.++....  ....+..|+|||.|+|.|+|++||++|++++++
T Consensus       367 ~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeRwl~~~~~~~--~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la  444 (489)
T PLN02936        367 PGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPERFDLDGPVPN--ETNTDFRYIPFSGGPRKCVGDQFALLEAIVALA  444 (489)
T ss_pred             cCCeEECCCCEEEecHHhccCChhhCCCccccCccccCCCCCCcc--ccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHH
Confidence            899999999999999999999999999999999999996431111  112345899999999999999999999999999


Q ss_pred             HHHhhceeeecCCCCccccCcCCCCccccCCCCceeeccccCCC
Q 043803          436 AMIQCFDWKVNGGDGATVDMEEAPGLTLPRAHPLICVPAARLNP  479 (490)
Q Consensus       436 ~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~  479 (490)
                      +|+++|+++++++  .+..  ...+.+..++.++.|++++|...
T Consensus       445 ~ll~~f~~~~~~~--~~~~--~~~~~~~~~~~~~~v~~~~R~~~  484 (489)
T PLN02936        445 VLLQRLDLELVPD--QDIV--MTTGATIHTTNGLYMTVSRRRVP  484 (489)
T ss_pred             HHHHhCeEEecCC--Cccc--eecceEEeeCCCeEEEEEeeeCC
Confidence            9999999998765  2222  22345556778999999988754


No 30 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3.4e-60  Score=425.02  Aligned_cols=418  Identities=21%  Similarity=0.358  Sum_probs=325.5

Q ss_pred             CCCCCCCC-CCccc------------------------------ceeEEeCCHHHHHHHHHhccccccCCCccchhhhhc
Q 043803           33 NLPPSPLA-LPIIG------------------------------LSCIVACSPETAKEILKTHETSFCDRPISATVDYLT   81 (490)
Q Consensus        33 ~~pPgP~~-~PiiG------------------------------~~~vvv~dp~~i~~il~~~~~~f~~~~~~~~~~~~~   81 (490)
                      +.||.-++ +|++|                              +.+.++.+|+....++......++-...........
T Consensus        31 ~~PPli~gwiP~lG~a~~fgk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~v  110 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAFGKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTPV  110 (486)
T ss_pred             CCCcccccCcchhhHHHHhccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhhh
Confidence            78999887 59999                              788999999999999976533332111111111112


Q ss_pred             cCCceeEeCCCChhHHHhHHHHHhhccchhhhhhhhhHHHHHHHHHHHH-HHHHhcCCCceehHHHHHHHHHHHHHHHHh
Q 043803           82 YGSADFAFAPYGPHWKFMKKICMTQLLGGQTLNQFIPIRSEEIKRFMQL-MLKKAKASEAVDVGRELIRLTNNVMPRMTM  160 (490)
Q Consensus        82 ~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~l~~~-l~~~~~~~~~vdl~~~~~~~~~~vi~~~~f  160 (490)
                      +| ++.+...++....++.+++ ...+....++.+.+.|.+++.+.++. +.+   +|++..+.+....+.+.+.-.+.|
T Consensus       111 Fg-~~v~~d~~~~~~~e~~~~~-k~~L~~~~lk~~~e~m~~el~~~f~~~~~~---s~~~d~l~~~~~~ii~tAs~~ll~  185 (486)
T KOG0684|consen  111 FG-KGVVYDVPNHVMMEQKKFF-KSALGGVALKSLVELMLEELHAYFETSLGE---SGETDGLYTFCRLIIFTASRLLLG  185 (486)
T ss_pred             cC-CCccccCCCchHHHHHHHH-HHHhchhhHHHHHHHHHHHHHHHHhccccc---ccchhHhhhhhHHHhhhhHHHhhh
Confidence            23 2455556677777888787 57788999999999999999998887 333   566777788888888877777777


Q ss_pred             ccccCCChhhHHHHHHHHHHHHHhhccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCC
Q 043803          161 GQICSNNEEEADEVMNLVLSIFELSGKFNLADCIWFCKNLDLQGFGKKMKEARKRFDTMMERIIKEHEETRKTNKETGRD  240 (490)
Q Consensus       161 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  240 (490)
                      |+.....++........+++-+.   .  +...+|.  ++ +....+...++++.+.+++...+.++++....       
T Consensus       186 ~e~r~~~d~~~a~l~~dLd~~F~---~--~d~~FP~--~L-P~~~~r~~~ra~~~i~k~f~~~i~~rr~s~s~-------  250 (486)
T KOG0684|consen  186 GEVRDQLDADVAKLYHDLDQGFQ---P--FDFLFPY--NL-PIPLLRRRDRARKKISKIFSKIILDRRASISK-------  250 (486)
T ss_pred             hhhhhhhcchHHHHHHHHhcccc---c--hHhhccc--CC-CcchhhhHHHHHHHHHHHHHHHHHHHHhcccc-------
Confidence            77665533232333333333221   1  2223443  22 22344555689999999999999888876532       


Q ss_pred             CCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhccccchHHHHHHHHHHHHhChHHHHHHHHHHhHhhCCCCc-cC
Q 043803          241 DAPNDLLDILLTVSEDESSEIKLTRENVKAFFMNIFSGGTDTSAITTEWALAELINHLDIMNKAKEEIDVVAGKNRL-VE  319 (490)
Q Consensus       241 ~~~~d~l~~ll~~~~~~~~~~~l~~~~l~~~~~~~l~Ag~dTt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~-~~  319 (490)
                       ...|+++.+++...+   +...+++|+....+.+++||..||+.|..|++++|++|||+++.+++|+.+++|.++. ++
T Consensus       251 -~~~dmlq~l~~~y~d---g~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~  326 (486)
T KOG0684|consen  251 -WDNDMLQSLMEKYKD---GRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLT  326 (486)
T ss_pred             -ccHHHHHHHHHHhhc---CCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCC
Confidence             566899999884322   3468899999999999999999999999999999999999999999999999987654 99


Q ss_pred             ccccCCChhHHHHHHhhccCCCCCCCcccccccceeecC----EEeCCCCEEEeehhhccCCCCCCCCCCCCCCCccccC
Q 043803          320 ESDIANFPYLQALVKETLRLHPAGPMSVRESTENCTING----YEIPAKTRVFINVWSIGRDPKHWEAPLEFRPERFIAE  395 (490)
Q Consensus       320 ~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~~~~l~g----~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~  395 (490)
                      +++++++|.|++||+|||||+||.+...|.+.+|.++.+    |.||+|..|.+++..+|+||++|+||+.|+|+||+++
T Consensus       327 ~d~L~~lplL~~~IkEtLRL~~p~~~~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~  406 (486)
T KOG0684|consen  327 YDQLKDLPLLDSCIKETLRLHPPAHSLMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKD  406 (486)
T ss_pred             HHHHhcchHHHHHHHHHHhcCCchhhHHHhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCC
Confidence            999999999999999999999999999999999999976    9999999999999999999999999999999999987


Q ss_pred             CCCccccccCCccceecCCCCCCCCCchHHHHHHHHHHHHHHHhhceeeecCCCCccccCcCCCCccccCCCCceeeccc
Q 043803          396 DGKSQLAVRGKHYHYIPFGSGRRACPGISLALHMVHSTLAAMIQCFDWKVNGGDGATVDMEEAPGLTLPRAHPLICVPAA  475 (490)
Q Consensus       396 ~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  475 (490)
                      +++.+..-..-++.+||||+|.|.|||+.||.+|+|.++..+|++||++++++   +.+-.....++..|..+++++.++
T Consensus       407 ~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~---~~P~~d~s~~v~~P~g~v~irYK~  483 (486)
T KOG0684|consen  407 NGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDG---PFPEVDYSRMVMQPEGDVRIRYKR  483 (486)
T ss_pred             CcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCC---CCCCCCHHHhhcCCCCCceEEEee
Confidence            64442222345567899999999999999999999999999999999999986   333333344578899999999998


Q ss_pred             cC
Q 043803          476 RL  477 (490)
Q Consensus       476 r~  477 (490)
                      |.
T Consensus       484 R~  485 (486)
T KOG0684|consen  484 RP  485 (486)
T ss_pred             cC
Confidence            85


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=3.9e-54  Score=416.68  Aligned_cols=371  Identities=17%  Similarity=0.239  Sum_probs=268.8

Q ss_pred             CCCCCCCCCCCCCccc------------------------------------cee-------EEeCCHHHHHHHHHh---
Q 043803           30 ITSNLPPSPLALPIIG------------------------------------LSC-------IVACSPETAKEILKT---   63 (490)
Q Consensus        30 ~~~~~pPgP~~~PiiG------------------------------------~~~-------vvv~dp~~i~~il~~---   63 (490)
                      .+.+.|||+.|+|++|                                    .+.       |+++||++++.+|.+   
T Consensus        14 ~~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~   93 (480)
T PLN02648         14 LPLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKV   93 (480)
T ss_pred             CCCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhc
Confidence            3556799999999999                                    233       899999999999975   


Q ss_pred             -ccccccCCCccchhhhhccCCc--eeEeCCCChhHHHhHHHHHhhccchhhhhhhhhHHHHHHHHHHHHHHHHhcCCCc
Q 043803           64 -HETSFCDRPISATVDYLTYGSA--DFAFAPYGPHWKFMKKICMTQLLGGQTLNQFIPIRSEEIKRFMQLMLKKAKASEA  140 (490)
Q Consensus        64 -~~~~f~~~~~~~~~~~~~~~~~--~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~  140 (490)
                       +...|..... ....  ..|+.  ..++..+|+.|+++||++ .+.|+ ..++.+.+.|.+.++++++.|.+....+.+
T Consensus        94 ~~~~~~~~~~~-~~~~--l~G~~~~~s~~~~~g~~H~r~Rrll-~~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~~~~~  168 (480)
T PLN02648         94 DKRDVFTGTYM-PSTA--FTGGYRVLSYLDPSEPKHAKLKSFL-FELLK-SRHRRFIPEFRAAFAELFDTWEAELAKKGK  168 (480)
T ss_pred             cccccceeeec-cCcc--ccCCceeeeecCCCCchHHHHHHHH-HHHHH-HhhhhhhhHHHHHHHHHHHHHHHHHhhCCC
Confidence             3333443222 2222  22322  145667899999999998 58898 577889999999999999999664344567


Q ss_pred             eehHHHHHHHHHHHHHHHHhccccCCChhhHHHHHHHHHHHHHhhccccccccccccccccccchHHH------------
Q 043803          141 VDVGRELIRLTNNVMPRMTMGQICSNNEEEADEVMNLVLSIFELSGKFNLADCIWFCKNLDLQGFGKK------------  208 (490)
Q Consensus       141 vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~------------  208 (490)
                      +|+.+.++.++++++++++||.+.+.. .....+.......+...       .+|..+.. ......+            
T Consensus       169 vdv~~~~~~lt~~vi~~~lfG~~~~~~-~l~~~~~~~~~~~~~~~-------~~p~~~~~-l~~~~~~~i~~~~~~~~~~  239 (480)
T PLN02648        169 AEFNDPLDQMAFNFLCKALTGKDPSET-ALGSDGPALIQKWLALQ-------LAPLASTG-LPHVLEELLLHTFPLPFFL  239 (480)
T ss_pred             ccccchHHHHHHHHHHHHHcCCCcchh-hhccchhHHHHHHHHHH-------hhHHHHcC-chHHHHHHhhcccCCchhh
Confidence            999999999999999999999866541 01111112222211100       00111000 0000000            


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHH-HhhccccchHHHH
Q 043803          209 MKEARKRFDTMMERIIKEHEETRKTNKETGRDDAPNDLLDILLTVSEDESSEIKLTRENVKAFFMN-IFSGGTDTSAITT  287 (490)
Q Consensus       209 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~l~~~~~~-~l~Ag~dTt~~~l  287 (490)
                      ..+..+.+.+++.                       +.+..+++...+    .++++++++++++. +.++|++||+.++
T Consensus       240 ~~~~~~~~~~~~~-----------------------~~~~~ll~~~~~----~~l~~~ei~~~~l~~~~~~t~~~~~~~l  292 (480)
T PLN02648        240 VKSDYDKLYDFFR-----------------------ASATEALDLAEK----FGISREEALHNLLFVLGFNAFGGFKIFF  292 (480)
T ss_pred             hhccHHHHHHHHH-----------------------HHHHHHHHHHHh----cCCCHHHHHHHHHHHHHHHhhHHHHHHH
Confidence            0001111111111                       112233332211    24899999999875 4577788888999


Q ss_pred             HHHHHHHHhChH-HHHHHHHHHhHhhCC-CCccCccccCCChhHHHHHHhhccCCCCCCCcccccccceeec----CEEe
Q 043803          288 EWALAELINHLD-IMNKAKEEIDVVAGK-NRLVEESDIANFPYLQALVKETLRLHPAGPMSVRESTENCTIN----GYEI  361 (490)
Q Consensus       288 ~~~l~~L~~~p~-~q~~l~~Ei~~~~~~-~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~~~~l~----g~~i  361 (490)
                      +|++|+|++||+ +|++|++|++.+.+. ++.++++++++||||++||+|+||++|++++..|.+.+|++++    ||.|
T Consensus       293 ~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d~~l~~~~~g~~I  372 (480)
T PLN02648        293 PALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDFVIESHDAAFEI  372 (480)
T ss_pred             HHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccccceecCCEEEecCCceEEE
Confidence            999999999995 999999999998863 4568999999999999999999999999999999999999996    7999


Q ss_pred             CCCCEEEeehhhccCCCCCCCCCCCCCCCccccCCCCccccccCCccceec---------CCCCCCCCCchHHHHHHHHH
Q 043803          362 PAKTRVFINVWSIGRDPKHWEAPLEFRPERFIAEDGKSQLAVRGKHYHYIP---------FGSGRRACPGISLALHMVHS  432 (490)
Q Consensus       362 p~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~---------Fg~G~r~C~G~~lA~~~~~~  432 (490)
                      |||+.|+++.+.+||||++|+||++|||+||++++..       ....+++         ||+|+|.|+|++||++|+++
T Consensus       373 pkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~-------~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~  445 (480)
T PLN02648        373 KKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGE-------KLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARL  445 (480)
T ss_pred             CCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCcc-------ccccccccCCCcccCCCCCCCccCccHHHHHHHHHH
Confidence            9999999999999999999999999999999864211       1122333         46778999999999999999


Q ss_pred             HHHHHHhhce-eeecCC
Q 043803          433 TLAAMIQCFD-WKVNGG  448 (490)
Q Consensus       433 ~l~~ll~~f~-~~~~~~  448 (490)
                      ++++|+++|+ +++.++
T Consensus       446 ~la~Ll~~f~~~~l~~~  462 (480)
T PLN02648        446 FVAELFLRYDSFEIEVD  462 (480)
T ss_pred             HHHHHHHHhCEEeecCC
Confidence            9999999998 998765


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=5.9e-53  Score=403.93  Aligned_cols=337  Identities=25%  Similarity=0.387  Sum_probs=275.2

Q ss_pred             eeEEeCCHHHHHHHHHhccccccCCCccchhh--hhccCCceeEeCCCChhHHHhHHHHHhhccchhhhhhhhhHHHHHH
Q 043803           47 SCIVACSPETAKEILKTHETSFCDRPISATVD--YLTYGSADFAFAPYGPHWKFMKKICMTQLLGGQTLNQFIPIRSEEI  124 (490)
Q Consensus        47 ~~vvv~dp~~i~~il~~~~~~f~~~~~~~~~~--~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~  124 (490)
                      ..+++++++++++++++.. .+++........  .....+.+.++..+|+.|.++||.+ ++.|+++.++.+.+.+.+.+
T Consensus        49 ~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~Rkl~-~~~F~~~~~~~~~~~i~~~~  126 (411)
T COG2124          49 GFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRLRKLL-APAFTPRALRGYRPLIREIA  126 (411)
T ss_pred             eEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHHHHHh-ccccCHHHHHHHHHHHHHHH
Confidence            4799999999999998763 222222111111  1122222336677899999999998 79999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCceehHHHHHHHHHHHHHHHHhccccCCChhhHHHHHHHHHHHHHhhccccccccccccccccccc
Q 043803          125 KRFMQLMLKKAKASEAVDVGRELIRLTNNVMPRMTMGQICSNNEEEADEVMNLVLSIFELSGKFNLADCIWFCKNLDLQG  204 (490)
Q Consensus       125 ~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~  204 (490)
                      +++++.+ .  .. +.+++.+.+..+++++|+ .+||.+.+..    ..+............        |..   ....
T Consensus       127 ~~~~~~~-~--~~-~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~----~~~~~~~~~~~~~~~--------~~~---~~~~  186 (411)
T COG2124         127 DRLLDDL-W--QG-GADLVLDFAAELTLRVIA-ELLGVPLEDR----PQLLRWSDALLLRLD--------PDL---GPEE  186 (411)
T ss_pred             HHHHHhc-c--cC-CchhHHHHhhhhhHHHHH-HHhCCCHHHH----HHHHHHHHHHHhccC--------ccc---CCcc
Confidence            9999998 3  22 788999999999999999 9999977632    223333332222100        111   1222


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcHHHHHHhhcccccccccCCHHHHHHHHHHHhhccccchH
Q 043803          205 FGKKMKEARKRFDTMMERIIKEHEETRKTNKETGRDDAPNDLLDILLTVSEDESSEIKLTRENVKAFFMNIFSGGTDTSA  284 (490)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~l~~~~~~~l~Ag~dTt~  284 (490)
                      ...+..++...+.+++..+|++++.           ...+|+++.|+.+..++.  ..+|++||+++++++++||+|||+
T Consensus       187 ~~~~~~~a~~~~~~~~~~li~~rR~-----------~~~~dlls~l~~a~~~~~--~~lsd~Ei~~~~~~ll~AGheTTa  253 (411)
T COG2124         187 PWRRARAARRELDAYLRALIAERRA-----------APRDDLLSLLLSAEDDGG--GRLSDDEIRDELITLLVAGHETTA  253 (411)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhcc-----------CCcccHHHHHHHHhhCCC--CcCCHHHHHHHHHHHHHhhhHHHH
Confidence            3567788999999999999998872           267899999998854432  259999999999999999999999


Q ss_pred             HHHHHHHHHHHhChHHHHHHHHHHhHhhCCCCccCccccCCChhHHHHHHhhccCCCCCCCcccccccceeecCEEeCCC
Q 043803          285 ITTEWALAELINHLDIMNKAKEEIDVVAGKNRLVEESDIANFPYLQALVKETLRLHPAGPMSVRESTENCTINGYEIPAK  364 (490)
Q Consensus       285 ~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~~~~l~g~~ip~G  364 (490)
                      ++|+|++|.|++||++++++++|.+.                ||++++++|+||++||++...|.+.+|++++|+.||||
T Consensus       254 ~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~E~LR~~ppv~~~~R~~~~d~~igg~~Ip~G  317 (411)
T COG2124         254 NALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVEETLRLYPPVPLARRVATEDVELGGYRIPAG  317 (411)
T ss_pred             HHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHHHHHHhCCchhccceeccCCEeeCCEEeCCC
Confidence            99999999999999999999999764                88999999999999999995599999999999999999


Q ss_pred             CEEEeehhhccCCCCCCCCCCCCCCCccccCCCCccccccCCccceecCCCCCCCCCchHHHHHHHHHHHHHHHhhceee
Q 043803          365 TRVFINVWSIGRDPKHWEAPLEFRPERFIAEDGKSQLAVRGKHYHYIPFGSGRRACPGISLALHMVHSTLAAMIQCFDWK  444 (490)
Q Consensus       365 ~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~  444 (490)
                      +.|+++.+++||||++|++|++|||+||.              ..|+|||+|+|.|+|.+||++|++++++.||++|++.
T Consensus       318 ~~V~~~~~~anrDp~~f~~P~~F~p~R~~--------------~~~l~FG~G~H~ClG~~lA~~E~~~~l~~ll~r~~~~  383 (411)
T COG2124         318 TVVLLSIGAANRDPEVFPDPDEFDPERFN--------------NAHLPFGGGPHRCLGAALARLELKVALAELLRRFPLL  383 (411)
T ss_pred             CEEEecHhhhcCChhhCCChhhcCCCCCC--------------CCCcCCCCCCccccCHHHHHHHHHHHHHHHHHhCchh
Confidence            99999999999999999999999999985              3589999999999999999999999999999999887


Q ss_pred             ecCC
Q 043803          445 VNGG  448 (490)
Q Consensus       445 ~~~~  448 (490)
                      ...+
T Consensus       384 ~~~~  387 (411)
T COG2124         384 LLAE  387 (411)
T ss_pred             hcCC
Confidence            7653


No 33 
>PF12273 RCR:  Chitin synthesis regulation, resistance to Congo red;  InterPro: IPR020999  RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 []. 
Probab=79.51  E-value=1.9  Score=34.07  Aligned_cols=33  Identities=18%  Similarity=0.269  Sum_probs=15.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCC
Q 043803            4 FSGYIILFLIWLVSMILVRTILGRSKITSNLPPS   37 (490)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pPg   37 (490)
                      |..+++++++++++++++.+..+|+++ +.+.|.
T Consensus         2 W~l~~iii~~i~l~~~~~~~~~rRR~r-~G~~P~   34 (130)
T PF12273_consen    2 WVLFAIIIVAILLFLFLFYCHNRRRRR-RGLQPI   34 (130)
T ss_pred             eeeHHHHHHHHHHHHHHHHHHHHHHhh-cCCCCc
Confidence            555555555555555554444333322 244443


No 34 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=64.08  E-value=5.1  Score=26.25  Aligned_cols=8  Identities=38%  Similarity=0.978  Sum_probs=6.8

Q ss_pred             CCCccccC
Q 043803          388 RPERFIAE  395 (490)
Q Consensus       388 ~P~R~l~~  395 (490)
                      ||||||.-
T Consensus        44 DPERWLP~   51 (59)
T PF08492_consen   44 DPERWLPK   51 (59)
T ss_pred             CccccCch
Confidence            89999974


No 35 
>PHA03049 IMV membrane protein; Provisional
Probab=59.53  E-value=29  Score=23.06  Aligned_cols=41  Identities=22%  Similarity=0.171  Sum_probs=21.9

Q ss_pred             HHHHHHHHHHHhccCCCCCCCCCCCCCCCcccceeEEeCCHHHHHHHHHhc
Q 043803           14 WLVSMILVRTILGRSKITSNLPPSPLALPIIGLSCIVACSPETAKEILKTH   64 (490)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~pPgP~~~PiiG~~~vvv~dp~~i~~il~~~   64 (490)
                      ++++.+++.-+|.|.+.....||.|--.          -.+|..+..|+++
T Consensus        12 VaIi~lIvYgiYnkk~~~q~~~p~~e~y----------e~~e~~kT~yvD~   52 (68)
T PHA03049         12 VVIIGLIVYGIYNKKTTTSQNPPSQEKY----------EKMEDLKTGYVDK   52 (68)
T ss_pred             HHHHHHHHHHHHhcccccCCCCCChhhc----------cCchhhhhhHHhh
Confidence            3334444445566665555666654322          2456666666654


No 36 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=58.89  E-value=35  Score=21.32  Aligned_cols=43  Identities=14%  Similarity=0.148  Sum_probs=35.4

Q ss_pred             HHHHHHHHHHhhccccchHHHHHHHHHHHHhChHHHHHHHHHH
Q 043803          266 ENVKAFFMNIFSGGTDTSAITTEWALAELINHLDIMNKAKEEI  308 (490)
Q Consensus       266 ~~l~~~~~~~l~Ag~dTt~~~l~~~l~~L~~~p~~q~~l~~Ei  308 (490)
                      -++..++..++-.|.|..+..++-.+....-||+....+..|+
T Consensus         5 ~d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    5 LDVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            4566777788888888888888888888888999988888776


No 37 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=55.07  E-value=13  Score=24.13  Aligned_cols=25  Identities=20%  Similarity=0.288  Sum_probs=19.4

Q ss_pred             HHHHHHHhChHHHHHHHHHHhHhhC
Q 043803          289 WALAELINHLDIMNKAKEEIDVVAG  313 (490)
Q Consensus       289 ~~l~~L~~~p~~q~~l~~Ei~~~~~  313 (490)
                      -++.||.+||++.++|.+.=...+|
T Consensus         4 ~iV~YLv~nPevl~kl~~g~asLIG   28 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKEGEASLIG   28 (57)
T ss_pred             HHHHHHHHChHHHHHHHcCCeeEec
Confidence            4678999999999999886544443


No 38 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=54.70  E-value=5.7  Score=25.16  Aligned_cols=10  Identities=50%  Similarity=1.148  Sum_probs=8.6

Q ss_pred             ecCCCCCCCC
Q 043803          411 IPFGSGRRAC  420 (490)
Q Consensus       411 ~~Fg~G~r~C  420 (490)
                      -+||-|+|+|
T Consensus        12 ~kfg~GsrsC   21 (56)
T KOG3506|consen   12 RKFGQGSRSC   21 (56)
T ss_pred             cccCCCCcce
Confidence            3699999998


No 39 
>PHA02681 ORF089 virion membrane protein; Provisional
Probab=53.66  E-value=41  Score=23.49  Aligned_cols=35  Identities=20%  Similarity=0.349  Sum_probs=17.6

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCC
Q 043803            1 MADFSGYIILFLIWLVSMILVRTILGRSKITSNLPP   36 (490)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP   36 (490)
                      |+-.-++++++++.+++++++.. |+|+..+.+-+|
T Consensus         1 Mgl~Da~~~~V~V~IVclliya~-YRR~~i~~p~~~   35 (92)
T PHA02681          1 MGLLDALLTVIVISIVCYIVIMM-YRRSCVSAPAVP   35 (92)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHH-HHhccCCCCCCC
Confidence            33344566666666555555444 555533333333


No 40 
>PHA02902 putative IMV membrane protein; Provisional
Probab=48.58  E-value=46  Score=21.94  Aligned_cols=22  Identities=23%  Similarity=0.439  Sum_probs=10.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhccC
Q 043803            7 YIILFLIWLVSMILVRTILGRS   28 (490)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~   28 (490)
                      +++++.+++++..++...|+|+
T Consensus         6 fvi~~v~v~Ivclliya~YrR~   27 (70)
T PHA02902          6 FVILAVIVIIFCLLIYAAYKRY   27 (70)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHh
Confidence            4444444444444444545655


No 41 
>PRK06789 flagellar motor switch protein; Validated
Probab=45.19  E-value=27  Score=24.21  Aligned_cols=39  Identities=10%  Similarity=0.151  Sum_probs=30.3

Q ss_pred             HHHhhccCCCCCCCcc-cccccce--eecCEEeCCCCEEEee
Q 043803          332 LVKETLRLHPAGPMSV-RESTENC--TINGYEIPAKTRVFIN  370 (490)
Q Consensus       332 ~i~E~lRl~p~~~~~~-R~~~~~~--~l~g~~ip~G~~v~~~  370 (490)
                      -++|-+.+.+-.-... |.+.+.+  .++|..|.+|..|.++
T Consensus        21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            4688888887665555 7776654  4599999999999876


No 42 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=42.88  E-value=23  Score=30.25  Aligned_cols=43  Identities=26%  Similarity=0.267  Sum_probs=30.8

Q ss_pred             CChhHHHHHHhhccCCCCCCCcccc-cccceeecCEEeCCCCEEEe
Q 043803          325 NFPYLQALVKETLRLHPAGPMSVRE-STENCTINGYEIPAKTRVFI  369 (490)
Q Consensus       325 ~l~~l~a~i~E~lRl~p~~~~~~R~-~~~~~~l~g~~ip~G~~v~~  369 (490)
                      .-....|||.|+.-+..-.  ..|. ..+|+.++|..|||||.|.-
T Consensus        51 ~~n~I~A~V~~~qtv~~Gs--~vrlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVDGS--RVRLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCCeEEEEEecceEEeCCC--EEEEEEcCceEECCEEeCCCCEEEE
Confidence            3455678999987665322  1243 46899999999999999865


No 43 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=41.11  E-value=23  Score=27.65  Aligned_cols=23  Identities=13%  Similarity=0.348  Sum_probs=17.1

Q ss_pred             CCCCchHHHHHHHHHHHHHHHhh
Q 043803          418 RACPGISLALHMVHSTLAAMIQC  440 (490)
Q Consensus       418 r~C~G~~lA~~~~~~~l~~ll~~  440 (490)
                      -+|.|+.||..++-.++.+|+..
T Consensus        18 yN~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS
T ss_pred             ecccchHHHHHHHHHHHHHHhcC
Confidence            36999999999999999999985


No 44 
>PF05961 Chordopox_A13L:  Chordopoxvirus A13L protein;  InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=38.60  E-value=96  Score=20.88  Aligned_cols=22  Identities=27%  Similarity=0.525  Sum_probs=9.4

Q ss_pred             HHHHHHHHHHHHHHHHHhccCCC
Q 043803            8 IILFLIWLVSMILVRTILGRSKI   30 (490)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~   30 (490)
                      ++++|++++.+++ ..+|.|.+.
T Consensus         7 Li~ICVaii~lIl-Y~iYnr~~~   28 (68)
T PF05961_consen    7 LIIICVAIIGLIL-YGIYNRKKT   28 (68)
T ss_pred             HHHHHHHHHHHHH-HHHHhcccc
Confidence            3444444444433 344554433


No 45 
>PF15206 FAM209:  FAM209 family
Probab=36.87  E-value=28  Score=27.19  Aligned_cols=38  Identities=13%  Similarity=0.159  Sum_probs=21.4

Q ss_pred             HHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCccc
Q 043803            8 IILFLIWLVSMILVRTILGRSKITSNLPPSPLALPIIG   45 (490)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pPgP~~~PiiG   45 (490)
                      +++++.+++.+++++......+.....|||.+|.|+-.
T Consensus        41 wlWL~Fvv~lyvilKf~g~~~K~keq~p~glrg~~frs   78 (150)
T PF15206_consen   41 WLWLLFVVVLYVILKFRGDSEKNKEQSPPGLRGCSFRS   78 (150)
T ss_pred             HHHHHHHHHHHheeEeccCcccccccCCCccCcccCCC
Confidence            44444444445554443333345567899988887654


No 46 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=34.12  E-value=1.8e+02  Score=20.90  Aligned_cols=49  Identities=2%  Similarity=-0.040  Sum_probs=40.6

Q ss_pred             CHHHHHHHHHHHhhccccchHHHHHHHHHHHHhChHHHHHHHHHHhHhh
Q 043803          264 TRENVKAFFMNIFSGGTDTSAITTEWALAELINHLDIMNKAKEEIDVVA  312 (490)
Q Consensus       264 ~~~~l~~~~~~~l~Ag~dTt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~  312 (490)
                      +...........++-=+++++......+.+-++||+..+++.+.+..-+
T Consensus        30 ~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   30 SSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             cHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            3455556667778888999999999999999999999999999886654


No 47 
>PF11138 DUF2911:  Protein of unknown function (DUF2911);  InterPro: IPR021314  This bacterial family of proteins has no known function. 
Probab=28.80  E-value=81  Score=25.35  Aligned_cols=41  Identities=22%  Similarity=0.509  Sum_probs=27.0

Q ss_pred             cccceeecCEEeCCCCEEEeehhh-------ccCCCCCCCCCCCCCCCc
Q 043803          350 STENCTINGYEIPAKTRVFINVWS-------IGRDPKHWEAPLEFRPER  391 (490)
Q Consensus       350 ~~~~~~l~g~~ip~G~~v~~~~~~-------~~~d~~~~~~p~~F~P~R  391 (490)
                      ..+|++++|..||+|+.-+..+..       ++.+.+.|.. ..++|+.
T Consensus        52 f~~dv~igGk~l~AG~Ysl~tiP~~~~WtvI~n~~~~~wG~-~~Y~~~~   99 (145)
T PF11138_consen   52 FSKDVTIGGKKLKAGTYSLFTIPGEDEWTVIFNKDTDQWGA-YNYDPSK   99 (145)
T ss_pred             ECCCeEECCEEcCCeeEEEEEecCCCeEEEEEECCCCccCc-cccCchh
Confidence            358899999999999976654432       3455555643 4445544


No 48 
>COG3954 PrkB Phosphoribulokinase [Energy production and conversion]
Probab=27.82  E-value=1.4e+02  Score=25.22  Aligned_cols=64  Identities=17%  Similarity=0.161  Sum_probs=39.1

Q ss_pred             hccccchHHHHHHHHHHHHhChHHH----------HHHHHHHhHhhCCCCccCc--cccCCChhHHHHHHhhccCC
Q 043803          277 SGGTDTSAITTEWALAELINHLDIM----------NKAKEEIDVVAGKNRLVEE--SDIANFPYLQALVKETLRLH  340 (490)
Q Consensus       277 ~Ag~dTt~~~l~~~l~~L~~~p~~q----------~~l~~Ei~~~~~~~~~~~~--~~~~~l~~l~a~i~E~lRl~  340 (490)
                      .||+.||+.+..-++..+.-++.+.          ...+.+|.++...++.+++  .+.++++.|+.+..|--|..
T Consensus        15 GAGTTTts~aFrKiF~~~~I~aa~iEGDsFHR~tRpeMd~~Irkar~~GrhisyFgpeANdf~~LE~~f~eYg~~G   90 (289)
T COG3954          15 GAGTTTTSLAFRKIFAQLNIHAAEVEGDSFHRYTRPEMDMAIRKARDAGRHISYFGPEANDFGLLEQTFIEYGQSG   90 (289)
T ss_pred             CCCcccHHHHHHHHHHhcCccHhhhccccccccCchhHHHHHHHHHHcCCcceecCccccchHHHHHHHHHhcccC
Confidence            5788888888888887776554322          1222333333333445543  44577888999988876643


No 49 
>PF12273 RCR:  Chitin synthesis regulation, resistance to Congo red;  InterPro: IPR020999  RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 []. 
Probab=25.52  E-value=30  Score=27.21  Aligned_cols=33  Identities=24%  Similarity=0.324  Sum_probs=14.6

Q ss_pred             HHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCccc
Q 043803           10 LFLIWLVSMILVRTILGRSKITSNLPPSPLALPIIG   45 (490)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~pPgP~~~PiiG   45 (490)
                      ++++++++++++.++..+..++++.- |-.  |+-|
T Consensus         4 l~~iii~~i~l~~~~~~~~~rRR~r~-G~~--P~~g   36 (130)
T PF12273_consen    4 LFAIIIVAILLFLFLFYCHNRRRRRR-GLQ--PIYG   36 (130)
T ss_pred             eHHHHHHHHHHHHHHHHHHHHHHhhc-CCC--CcCC
Confidence            34444444444444444444444444 443  4444


No 50 
>COG3115 ZipA Cell division protein [Cell division and chromosome partitioning]
Probab=25.46  E-value=84  Score=28.39  Aligned_cols=26  Identities=19%  Similarity=0.236  Sum_probs=20.0

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHhc
Q 043803            1 MADFSGYIILFLIWLVSMILVRTILG   26 (490)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~   26 (490)
                      |+++..++|++-++.++.++++-+|.
T Consensus         1 m~dLr~ILIIvG~IAIiaLLvhGlWt   26 (324)
T COG3115           1 MQDLRLILIIVGAIAIIALLVHGLWT   26 (324)
T ss_pred             CcchhhHHHHHHHHHHHHHHHhhhhh
Confidence            77888888887777777777777775


No 51 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=24.05  E-value=1.2e+02  Score=21.78  Aligned_cols=42  Identities=24%  Similarity=0.286  Sum_probs=24.9

Q ss_pred             HHHhhccccchHHHHHHHHHHHHh-------ChHHHHHHHHHHhHhhCC
Q 043803          273 MNIFSGGTDTSAITTEWALAELIN-------HLDIMNKAKEEIDVVAGK  314 (490)
Q Consensus       273 ~~~l~Ag~dTt~~~l~~~l~~L~~-------~p~~q~~l~~Ei~~~~~~  314 (490)
                      ++|++.=..+|+.+.--=|-.++.       .|++.+.+|+||-.++.+
T Consensus         4 ~dff~~r~~~Sa~~AkeRLQiilA~eR~~~~~pd~l~~Lr~eIl~VI~K   52 (88)
T COG0851           4 FDFFFSRKKNSAETAKERLQLILAHERAAGLQPDYLEQLRKEILEVISK   52 (88)
T ss_pred             HHHHHhcCCCcHHHHHHHHHHhhhhhhhcCCCcchHHHHHHHHHHHHHH
Confidence            344443333455554444433332       389999999999888754


No 52 
>PF15183 MRAP:  Melanocortin-2 receptor accessory protein family
Probab=23.74  E-value=2.4e+02  Score=20.02  Aligned_cols=23  Identities=13%  Similarity=0.310  Sum_probs=12.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhccC
Q 043803            6 GYIILFLIWLVSMILVRTILGRS   28 (490)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~   28 (490)
                      ++++.++++++.++++..+..+.
T Consensus        41 ~FWv~LA~FV~~lF~iL~~ms~s   63 (90)
T PF15183_consen   41 AFWVSLAAFVVFLFLILLYMSWS   63 (90)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcc
Confidence            45666666666655555554433


No 53 
>TIGR00589 ogt O-6-methylguanine DNA methyltransferase. All proteins in this family for which functions are known are involved alkyl-DNA transferases which remove alkyl groups from DNA as part of alkylation DNA repair. Some of the proteins in this family are also transcription regulators and have a distinct transcription regulatory domain. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=23.21  E-value=1.3e+02  Score=21.31  Aligned_cols=60  Identities=13%  Similarity=0.123  Sum_probs=38.9

Q ss_pred             HHHHHHHHHHhHhhCCCCccCccccCCC---hhHHHHHHhhccCCCCCCCcc--cccccceeecCE
Q 043803          299 DIMNKAKEEIDVVAGKNRLVEESDIANF---PYLQALVKETLRLHPAGPMSV--RESTENCTINGY  359 (490)
Q Consensus       299 ~~q~~l~~Ei~~~~~~~~~~~~~~~~~l---~~l~a~i~E~lRl~p~~~~~~--R~~~~~~~l~g~  359 (490)
                      +.|+++.+.+.+ ++.++..|+.++.++   |---..+--+++.+|......  |++..+-.++||
T Consensus         2 ~f~~~V~~~l~~-IP~G~v~TYg~iA~~~g~p~~~RaVg~al~~np~~~~iPcHRVv~s~G~l~~y   66 (80)
T TIGR00589         2 PFQQRVWQALRT-IPYGETKSYGQLAARIGNPKAVRAVGGANGRNPLAILVPCHRVIGKNGSLTGY   66 (80)
T ss_pred             hHHHHHHHHHhC-CCCCCcCCHHHHHHHhCCCChHHHHHHHHHhCCCCCCCCCceeECCCCCCCCC
Confidence            467788888766 555677788776432   222345556677776654444  888888778776


No 54 
>PF12444 Sox_N:  Sox developmental protein N terminal ;  InterPro: IPR022151  This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes. 
Probab=22.74  E-value=60  Score=23.18  Aligned_cols=20  Identities=10%  Similarity=0.511  Sum_probs=17.3

Q ss_pred             HHHHHHHHHHHhhceeeecC
Q 043803          428 HMVHSTLAAMIQCFDWKVNG  447 (490)
Q Consensus       428 ~~~~~~l~~ll~~f~~~~~~  447 (490)
                      ..|+-++..+|+-|||.+++
T Consensus        60 ~~IrdAVsqVLkGYDWtLVP   79 (84)
T PF12444_consen   60 VCIRDAVSQVLKGYDWTLVP   79 (84)
T ss_pred             HHHHHHHHHHhccCCceeee
Confidence            45788999999999999874


No 55 
>PRK05933 type III secretion system protein; Validated
Probab=22.32  E-value=95  Score=28.52  Aligned_cols=42  Identities=19%  Similarity=0.236  Sum_probs=33.0

Q ss_pred             HHHHHHhhccCCCCCCCcc-ccc-cc--ceeecCEEeCCCCEEEee
Q 043803          329 LQALVKETLRLHPAGPMSV-RES-TE--NCTINGYEIPAKTRVFIN  370 (490)
Q Consensus       329 l~a~i~E~lRl~p~~~~~~-R~~-~~--~~~l~g~~ip~G~~v~~~  370 (490)
                      .+--|+|.++|.+-...-. |.+ .+  |+.++|..|.+|..|+++
T Consensus       317 T~l~IkELL~L~~GSVIeLDk~a~GEpVDI~VNGrLIARGEVVVVd  362 (372)
T PRK05933        317 YSLSVGEFLKLGPGSILQFDGVHPTLGVDIILNGAKVGRGEIIALG  362 (372)
T ss_pred             ccccHHHHhccCCCCEEEeCCcCCCCCEEEEECCEEEeeeeEEEEC
Confidence            4557899999998776666 664 34  566699999999999886


No 56 
>PTZ00218 40S ribosomal protein S29; Provisional
Probab=22.11  E-value=40  Score=21.63  Aligned_cols=10  Identities=40%  Similarity=1.112  Sum_probs=8.4

Q ss_pred             cCCCCCCCCC
Q 043803          412 PFGSGRRACP  421 (490)
Q Consensus       412 ~Fg~G~r~C~  421 (490)
                      -||.|+|.|.
T Consensus        11 ~yGkGsr~C~   20 (54)
T PTZ00218         11 TYGKGSRQCR   20 (54)
T ss_pred             cCCCCCCeee
Confidence            3999999993


No 57 
>COG1759 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl    5'-monophosphate synthetase (purine biosynthesis) [Nucleotide transport and    metabolism]
Probab=21.01  E-value=1.6e+02  Score=27.23  Aligned_cols=41  Identities=24%  Similarity=0.417  Sum_probs=25.3

Q ss_pred             HHHHHhhccCCCCC---CCcc-cccccceee----cCEEeCCCCEEEee
Q 043803          330 QALVKETLRLHPAG---PMSV-RESTENCTI----NGYEIPAKTRVFIN  370 (490)
Q Consensus       330 ~a~i~E~lRl~p~~---~~~~-R~~~~~~~l----~g~~ip~G~~v~~~  370 (490)
                      +.+++.+..+.||.   |+++ -.++.|..+    -.-.|..||.|.++
T Consensus       276 er~V~a~kel~~PG~iGpFcLq~~~t~dl~~vVfevS~Ri~gGTNv~~~  324 (361)
T COG1759         276 ERFVEATKELVPPGIIGPFCLQTIVTDDLEFVVFEVSARIVGGTNVYMG  324 (361)
T ss_pred             HHHHHHHHHhcCCCcccceeeeeeecCCccEEEEEEeccccCCcccccC
Confidence            35778888888865   4444 445555443    13467777776554


No 58 
>COG4459 NapE Periplasmic nitrate reductase system, NapE component [Energy production and conversion]
Probab=20.94  E-value=1.4e+02  Score=19.32  Aligned_cols=28  Identities=18%  Similarity=0.202  Sum_probs=14.3

Q ss_pred             HHHHHHHHHHHHHHHHhccCCCCCCCCCCCCC
Q 043803            9 ILFLIWLVSMILVRTILGRSKITSNLPPSPLA   40 (490)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~pPgP~~   40 (490)
                      ++..+++..+-++.|.++--    --||||++
T Consensus        34 ilsV~~VG~yGFiVWM~Qii----fGPPGpp~   61 (62)
T COG4459          34 ILSVAFVGGYGFIVWMFQII----FGPPGPPG   61 (62)
T ss_pred             HHHHHHhcchhHHHHHHHHH----hCCCCCCC
Confidence            33444444555555655532    33677764


No 59 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=20.74  E-value=1.6e+02  Score=17.40  Aligned_cols=16  Identities=25%  Similarity=0.430  Sum_probs=11.0

Q ss_pred             HHHHH-hChHHHHHHHH
Q 043803          291 LAELI-NHLDIMNKAKE  306 (490)
Q Consensus       291 l~~L~-~~p~~q~~l~~  306 (490)
                      +..++ +||++++.++.
T Consensus        19 L~~l~~~HPei~~~i~~   35 (38)
T PF14483_consen   19 LQSLCERHPEIQQEIRS   35 (38)
T ss_dssp             HHHHHHHSTHHHHHHHT
T ss_pred             HHHHHHhChhHHHHHHh
Confidence            33344 89999887764


No 60 
>PF06024 DUF912:  Nucleopolyhedrovirus protein of unknown function (DUF912);  InterPro: IPR009261 This entry is represented by Autographa californica nuclear polyhedrosis virus (AcMNPV), Orf78; it is a family of uncharacterised viral proteins.
Probab=20.61  E-value=65  Score=24.02  Aligned_cols=7  Identities=14%  Similarity=0.225  Sum_probs=2.6

Q ss_pred             HHHHHHH
Q 043803           11 FLIWLVS   17 (490)
Q Consensus        11 ~~~~~~~   17 (490)
                      +|+++++
T Consensus        72 v~IlVil   78 (101)
T PF06024_consen   72 VCILVIL   78 (101)
T ss_pred             HHHHHHH
Confidence            3333333


No 61 
>PRK13467 F0F1 ATP synthase subunit C; Provisional
Probab=20.54  E-value=1.5e+02  Score=20.07  Aligned_cols=25  Identities=0%  Similarity=0.066  Sum_probs=20.6

Q ss_pred             HHHHHHHHHHHHhChHHHHHHHHHH
Q 043803          284 AITTEWALAELINHLDIMNKAKEEI  308 (490)
Q Consensus       284 ~~~l~~~l~~L~~~p~~q~~l~~Ei  308 (490)
                      +...+.++--++|+||.+.+++.-.
T Consensus        20 G~v~~~a~e~iaRqPE~~~~i~~~m   44 (66)
T PRK13467         20 GFLMANLFKSAARQPEMIGQLRSLM   44 (66)
T ss_pred             HHHHHHHHHHHHcChhHHHhHHHHH
Confidence            5667778888999999999998754


No 62 
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=20.01  E-value=44  Score=27.49  Aligned_cols=37  Identities=24%  Similarity=0.423  Sum_probs=25.6

Q ss_pred             CCCCCCccccCCCCccccccCCccceecCCCCCCCCCchHH
Q 043803          385 LEFRPERFIAEDGKSQLAVRGKHYHYIPFGSGRRACPGISL  425 (490)
Q Consensus       385 ~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~l  425 (490)
                      -+|||++|-.--    .....+....+-|..|+-.|.|..=
T Consensus        35 aeYnP~qFpGlv----~Rl~ePk~a~LIF~SGK~VcTGaKs   71 (185)
T COG2101          35 AEYNPEQFPGLV----YRLEEPKTAALIFRSGKVVCTGAKS   71 (185)
T ss_pred             CccCHhHCCeeE----EEecCCcceEEEEecCcEEEeccCc
Confidence            378999996420    0112345678999999999999753


Done!