Query 043811
Match_columns 448
No_of_seqs 139 out of 1228
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 14:38:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043811.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043811hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2bgh_A Vinorine synthase; VS, 100.0 1.7E-79 5.9E-84 625.9 38.6 404 1-442 3-420 (421)
2 4g22_A Hydroxycinnamoyl-COA sh 100.0 6.1E-79 2.1E-83 625.1 37.8 396 1-429 6-434 (439)
3 2e1v_A Acyl transferase; BAHD 100.0 1E-71 3.4E-76 574.3 34.1 403 2-435 6-448 (454)
4 2xr7_A Malonyltransferase; xen 100.0 7.7E-72 2.6E-76 575.1 28.8 398 3-435 2-448 (453)
5 2rkv_A Trichothecene 3-O-acety 100.0 2.6E-65 8.8E-70 526.3 29.7 388 24-439 5-449 (451)
6 1q9j_A PAPA5, polyketide synth 98.7 4.4E-06 1.5E-10 83.5 25.0 254 22-313 6-288 (422)
7 1l5a_A Amide synthase, VIBH; n 98.2 0.00013 4.4E-09 73.3 20.1 238 61-331 34-304 (436)
8 2jgp_A Tyrocidine synthetase 3 98.1 0.00034 1.2E-08 72.1 22.8 245 22-313 95-375 (520)
9 4hvm_A Tlmii; PSI-biology, mid 98.1 0.00029 9.9E-09 72.0 20.6 220 61-313 48-300 (493)
10 2xhg_A Tyrocidine synthetase A 97.9 0.0098 3.4E-07 59.8 27.8 270 22-332 16-336 (466)
11 2vsq_A Surfactin synthetase su 97.7 0.0031 1.1E-07 72.3 23.2 224 61-313 48-302 (1304)
12 3fot_A 15-O-acetyltransferase; 97.3 0.0032 1.1E-07 64.8 14.5 151 154-313 177-361 (519)
13 3cla_A Type III chloramphenico 69.6 3 0.0001 37.2 3.4 44 140-183 164-209 (213)
14 2i9d_A Chloramphenicol acetylt 68.3 3.4 0.00011 37.0 3.4 44 139-182 171-216 (217)
15 1q23_A Chloramphenicol acetylt 67.7 3.5 0.00012 36.9 3.4 44 140-183 168-213 (219)
16 3b8k_A PDCE2;, dihydrolipoylly 63.6 4.5 0.00015 36.8 3.3 29 155-183 204-232 (239)
17 1scz_A E2, dihydrolipoamide su 63.0 4.8 0.00016 36.4 3.4 30 155-184 196-225 (233)
18 1dpb_A Dihydrolipoyl-transacet 63.0 4.8 0.00016 36.7 3.4 30 155-184 208-237 (243)
19 3rqc_A Probable lipoamide acyl 62.8 4.2 0.00014 36.6 2.9 31 155-185 187-217 (224)
20 2ii3_A Lipoamide acyltransfera 61.3 5.3 0.00018 36.8 3.4 30 155-184 224-253 (262)
21 3mae_A 2-oxoisovalerate dehydr 55.7 7.6 0.00026 35.6 3.4 31 155-185 210-240 (256)
22 3l60_A Branched-chain alpha-ke 54.1 8.4 0.00029 35.2 3.4 30 155-184 205-234 (250)
23 2xl1_A Arginine attenuator pep 39.1 17 0.0006 19.6 1.7 19 256-274 6-24 (26)
24 3dva_I Dihydrolipoyllysine-res 35.0 8.1 0.00028 38.3 0.0 30 155-184 391-420 (428)
25 1x93_A Hypothetical protein HP 32.6 82 0.0028 20.6 4.4 22 226-247 2-23 (55)
26 2k1o_A Putative; repressor, tr 23.2 1.4E+02 0.0048 20.2 4.4 43 223-278 13-55 (66)
No 1
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=1.7e-79 Score=625.92 Aligned_cols=404 Identities=33% Similarity=0.553 Sum_probs=338.4
Q ss_pred CcEEEEEeeeEeCCCCCCCCCccccCCcccccCcCccceEEEEecCCCCCCCCCCCCchhHHHHHHHHHHHhhccccccc
Q 043811 1 MQLRIISKKIIKPSSPTPLHLKTHKLSLLDQLAPDIYTSLLFFYNGPSRVYDETNTSTNNVYHRLQSSLSKTLNLYYPFA 80 (448)
Q Consensus 1 ~~v~~~~~~~V~P~~~t~~~~~~~~LS~lD~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~La 80 (448)
|+|+++++++|+|+.|||.+.+.++||+||+..++.|++.+|||+.++ ....+....+++||+||+++|++|||||
T Consensus 3 m~v~v~~~~~V~P~~ptp~~~~~~~LS~lD~~~~~~~~~~~~~y~~~~----~~~~~~~~~~~~Lk~sLs~~L~~~~plA 78 (421)
T 2bgh_A 3 PQMEKVSEELILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPL----DSNLDPAQTSQHLKQSLSKVLTHFYPLA 78 (421)
T ss_dssp -CEEEEEEEEEECSSCCCTTSCCCBCCHHHHTSCSSEEEEEEEECCCS----SCCCCHHHHHHHHHHHHHHHTTTSGGGG
T ss_pred ceEEEeeeEEEeCCCCCCCCCcccCCChHHhcccccccceEEEEeCCC----ccccchhhHHHHHHHHHHHHhhhcchhc
Confidence 689999999999999998765689999999987789999999999764 2112356789999999999999999999
Q ss_pred ceeecCCeeEecCCCCceEEEeecCCCCCccccccC-CChhhhhccCCCCCCCCCC-CCCCCceeEEEEeeecCCeEEEe
Q 043811 81 GKLLQDNYVVDCDDSGIPFVETRGPSSISMSEVLKN-PEMNTLQQLLPFNPNKKYL-SSTDDVNAAVQINHFDCGGVAIG 158 (448)
Q Consensus 81 Grv~~~~~~i~~~~~Gv~f~~a~~~~~~~l~dl~~~-p~~~~~~~l~P~~~~~~~~-~~~~~Pll~vQvt~~~cGG~~l~ 158 (448)
|| ++++++|+||++||.|++|++ +++++|+... |+...++.|+|.......+ ...+.|++.+|||+|+|||++||
T Consensus 79 GR-l~~~~~i~c~~~Gv~fv~A~~--d~~l~~~~~~~p~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvt~f~cgG~~lg 155 (421)
T 2bgh_A 79 GR-INVNSSVDCNDSGVPFVEARV--QAQLSQAIQNVVELEKLDQYLPSAAYPGGKIEVNEDVPLAVKISFFECGGTAIG 155 (421)
T ss_dssp SE-EETTTEEECCCCCEEEEEEEE--SSCHHHHHSCCSSGGGGGGGSSSCSSSSSSSCCCTTCSEEEEEEECTTSCEEEE
T ss_pred cc-cCCCcEEEEcCCceEEEEEEE--cCCHHHHhccCCChHHHHhcCCCCCCccccccccCCceEEEEEEEEcCCCEEEE
Confidence 99 567899999999999999999 9999999765 6655677888866211000 13568999999999999999999
Q ss_pred ccchhhccchhhHHHHHHHHHHHhcCCCCcccccCCCCccC-CcccCC-CCCCCccccccccccCCCCeeEEEEEecHHH
Q 043811 159 LNFRHIVADGAASVGFIQNWAKLHSSDDNSIINYKHTVVDC-TDTFPP-NQEISSYARRINEWQRAPECVTKRFVFDGGK 236 (448)
Q Consensus 159 ~~~~H~v~Dg~g~~~fl~~wA~~~rg~~~~~~~~~~P~~dr-~~l~~~-~~~~p~~~~~~~~~~~~~~~~~~~f~fs~~~ 236 (448)
+++||.++||.|+.+|+++||++|||.... + .|.+|| ..+.|+ + +.|. + .+....+++.++|+|++++
T Consensus 156 ~~~~H~v~Dg~~~~~fl~~wa~~~rg~~~~-~---~P~~dr~~~l~p~~~-~~~~----~-~~~~~~~~~~~~f~f~~~~ 225 (421)
T 2bgh_A 156 VNLSHKIADVLSLATFLNAWTATCRGETEI-V---LPNFDLAARHFPPVD-NTPS----P-ELVPDENVVMKRFVFDKEK 225 (421)
T ss_dssp EEEETTTCCHHHHHHHHHHHHHHHTTCSCC-C---CCBCSHHHHHSCCCT-TCCC----C-CCCCCSSEEEEEEEECHHH
T ss_pred EEeeEEechHHHHHHHHHHHHHHhcCCCCC-C---CCccccccccCCCcc-cCCC----C-ccCCccceEEEEEEECHHH
Confidence 999999999999999999999999997533 5 789999 777766 4 4443 1 1223467899999999999
Q ss_pred HHHHHHHhhhcccccCCCCCCCCHhHHHHHHHHHHHHhhhcCc--CCCCeeEEEEEecCccccCCCCCCCccCcceeee-
Q 043811 237 VAALRGEIIKKDASLSLNQYRPTRFEAVSGLIWDALIAMDREE--NVGSTCIASVPVNLRNRMNPPLPEDCIGNLYHAV- 313 (448)
Q Consensus 237 l~~Lk~~a~~~~~~~~~~~~~~St~dal~A~iW~~~~rar~~~--~~~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~~- 313 (448)
|++||+.+.++. . ..++|+||+|+||+|+|++|||... + ++++++.++||+|+|++||+|++|+||++..+
T Consensus 226 i~~LK~~a~~~~---~--~~~~St~d~l~A~iW~~~~~Ar~~~~~~-~~~~~l~~~vd~R~rl~pplP~~y~GN~~~~~~ 299 (421)
T 2bgh_A 226 IGALRAQASSAS---E--EKNFSRVQLVVAYIWKHVIDVTRAKYGA-KNKFVVVQAVNLRSRMNPPLPHYAMGNIATLLF 299 (421)
T ss_dssp HHHHHHHTC----------CCCCHHHHHHHHHHHHHHHHHHHHSCC-CSCEEEEEEEESGGGSSSCCCTTBCSCCEEEEE
T ss_pred HHHHHHHhhccC---C--CCCCchhHhHHHHHHHHHHHHhcccCCC-CCceEEEEEecCccccCCCCCCCccceEEEEEE
Confidence 999999987431 1 2679999999999999999998753 3 57899999999999999999999999999999
Q ss_pred e-eccCc---cc--hHHHHHHHHhhhhHHHhhhccCCchhhHHHHHHHHHHHhhcCCCcceEEEeccCCCCCcccccccc
Q 043811 314 T-CTANK---TS--ARNINQFTKMVSDDFVRKVYQDGGIVFVNQYKEAVEEIMKGDNGVRLFGFTGVIGLPFYEPDFGWG 387 (448)
Q Consensus 314 ~-~~~~~---l~--A~~IR~ai~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~y~~DFG~G 387 (448)
+ +++++ |+ |..||+++.+++++|++++.+ +.+... .....+.+++|||.++++|++|||||
T Consensus 300 ~~~~~~~~~~l~~~a~~ir~ai~~~~~~~~~~~~~---------~~~~~~----~~~~~~~~~vssw~~~~~y~~DFGwG 366 (421)
T 2bgh_A 300 AAVDAEWDKDFPDLIGPLRTSLEKTEDDHNHELLK---------GMTCLY----ELEPQELLSFTSWCRLGFYDLDFGWG 366 (421)
T ss_dssp EEECTTCCCCGGGGHHHHHHHTCCCSSCHHHHHHH---------HHHHHH----TSCGGGEEEEEEETTSCGGGCCSSSC
T ss_pred EEecccccccHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHhh----ccCCCCeEEEeccccCCCcccccCCC
Confidence 6 77754 65 999999999999888886543 322211 11224569999999999999999999
Q ss_pred cccceeccc-cCCCEEEEeecCCCCeEEEEEeCCccchhhhccCcccccccccCCC
Q 043811 388 KPVWSTTAM-SLNNIAVLLGTRDGKGVEAWVGLPINDMPKFEQDPGILTYASFIPS 442 (448)
Q Consensus 388 ~P~~~~~~~-~~~g~~~i~p~~~~~g~ev~v~L~~~~m~~l~~d~e~~~~~~~~~~ 442 (448)
||+++++.. +.+|+++++|+++++|++|+|+|++++|++|++ ||.+|++++|+
T Consensus 367 kP~~v~~~~~~~~g~~~~~p~~~~~gi~v~v~L~~~~m~~f~~--e~~~~~~~~~~ 420 (421)
T 2bgh_A 367 KPLSACTTTFPKRNAALLMDTRSGDGVEAWLPMAEDEMAMLPV--ELLSLVDSDFS 420 (421)
T ss_dssp CCSEEECCCCCSTTEEEEEECTTSSSEEEEEEEEHHHHHHSCH--HHHTTBCCCCC
T ss_pred ccCeecccccCcCCEEEEEecCCCCeEEEEEEcCHHHHHHHHH--HHHHhhcCCCC
Confidence 999999877 678999999999888999999999999999998 99999999997
No 2
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=6.1e-79 Score=625.10 Aligned_cols=396 Identities=21% Similarity=0.403 Sum_probs=324.3
Q ss_pred CcEEEEEeeeEeCCCCCCCCCccccCCcccccCcCccceEEEEecCCCCCCCCCCCCchhHHHHHHHHHHHhhccccccc
Q 043811 1 MQLRIISKKIIKPSSPTPLHLKTHKLSLLDQLAPDIYTSLLFFYNGPSRVYDETNTSTNNVYHRLQSSLSKTLNLYYPFA 80 (448)
Q Consensus 1 ~~v~~~~~~~V~P~~~t~~~~~~~~LS~lD~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~La 80 (448)
|+|+++++++|+|+.|||. +.++||+||+.+++.|++.+|||+.++ . +....+++||+||+++|++|||||
T Consensus 6 ~~V~i~~~~~V~P~~~tp~--~~~~LS~lD~~~~~~~~~~~~~y~~~~----~---~~~~~~~~Lk~sLs~~L~~f~plA 76 (439)
T 4g22_A 6 MKIEVKESTMVRPAQETPG--RNLWNSNVDLVVPNFHTPSVYFYRPTG----S---SNFFDAKVLKDALSRALVPFYPMA 76 (439)
T ss_dssp CCEEEEEEEEECCSSCCCC--CEECCCHHHHSCCTTCCCEEEEECCCS----C---TTTTCHHHHHHHHHHHTTTTGGGG
T ss_pred eEEEEeeeEEEeCCCCCCC--CeecCChhHhCccccceeeEEEEcCCC----C---ccccHHHHHHHHHHHHHhhccccc
Confidence 6899999999999999975 469999999998899999999999754 2 223468999999999999999999
Q ss_pred ceeec---CCeeEecCCCCceEEEeecCCCCCccccccCCChhhhhccCCCCCCCCCCCCCCCceeEEEEeeecCCeEEE
Q 043811 81 GKLLQ---DNYVVDCDDSGIPFVETRGPSSISMSEVLKNPEMNTLQQLLPFNPNKKYLSSTDDVNAAVQINHFDCGGVAI 157 (448)
Q Consensus 81 Grv~~---~~~~i~~~~~Gv~f~~a~~~~~~~l~dl~~~p~~~~~~~l~P~~~~~~~~~~~~~Pll~vQvt~~~cGG~~l 157 (448)
|||.. |+++|+||++||.|++|++ +.+++|+........+++|+|..+.. ....+.|++.||||+|+|||++|
T Consensus 77 GRl~~~~~g~~~i~c~~~Gv~fv~A~~--d~~l~~l~~~~p~~~~~~l~p~~~~~--~~~~~~pll~vQvT~f~cGG~~l 152 (439)
T 4g22_A 77 GRLKRDEDGRIEIECNGEGVLFVEAES--DGVVDDFGDFAPTLELRRLIPAVDYS--QGISSYALLVLQVTYFKCGGVSL 152 (439)
T ss_dssp CEEEECTTSCEEEECCCCCEEEEEEEE--SSCGGGGTTCCCCGGGGGGSCCCCTT--SCTTSSCSEEEEEEECTTSCEEE
T ss_pred eeeeeCCCCCEEEEECCCCCEEEEEEc--CCcHHHhcCCCCCHHHHhcCCCCCcc--cccccCceeEEEEEEecCCCEEE
Confidence 99654 5799999999999999999 99999997632223567888866431 22456899999999999999999
Q ss_pred eccchhhccchhhHHHHHHHHHHHhcCCCCcccccCCCCccCCcccC---CCC--CCCcccccccc--c-----cCC-CC
Q 043811 158 GLNFRHIVADGAASVGFIQNWAKLHSSDDNSIINYKHTVVDCTDTFP---PNQ--EISSYARRINE--W-----QRA-PE 224 (448)
Q Consensus 158 ~~~~~H~v~Dg~g~~~fl~~wA~~~rg~~~~~~~~~~P~~dr~~l~~---~~~--~~p~~~~~~~~--~-----~~~-~~ 224 (448)
|+++||.++||.|+.+|+++||++|||.. ... .|++||+.+.+ |.. ++++|.+.+.. . ... .+
T Consensus 153 g~~~~H~v~Dg~~~~~Fl~~wa~~~rg~~-~~~---~P~~dr~~l~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (439)
T 4g22_A 153 GVGMRHHAADGFSGLHFINSWSDMARGLD-VTL---PPFIDRTLLRARDPPQPQFQHIEYQPPPALAVSPQTAASDSVPE 228 (439)
T ss_dssp EEEECTTTCCHHHHHHHHHHHHHHHTTCC-CSS---CCBCCGGGGCCCSSCCCSSCCGGGSCCC---------------C
T ss_pred EEEeeeccCcHHHHHHHHHHHHHHhCCCC-CCC---CCccccccccCCCCCCCCcCcccccCCCCCcccccccccCCccc
Confidence 99999999999999999999999999975 345 79999986642 221 22233321111 0 112 57
Q ss_pred eeEEEEEecHHHHHHHHHHhhhcccccCCCCCCCCHhHHHHHHHHHHHHhhhcCcCCCCeeEEEEEecCccccCCCCCCC
Q 043811 225 CVTKRFVFDGGKVAALRGEIIKKDASLSLNQYRPTRFEAVSGLIWDALIAMDREENVGSTCIASVPVNLRNRMNPPLPED 304 (448)
Q Consensus 225 ~~~~~f~fs~~~l~~Lk~~a~~~~~~~~~~~~~~St~dal~A~iW~~~~rar~~~~~~~~~~l~~~vd~R~rl~pplP~~ 304 (448)
++.++|+|++++|++||+++.++. . ..++|+||+|+||+|||++|||+..+ ++.+++.++||+|+|++||+|++
T Consensus 229 ~~~~~f~fs~~~i~~LK~~a~~~~---~--~~~~St~dal~A~iWr~~~rAr~~~~-~~~~~l~~~vd~R~rl~Pplp~~ 302 (439)
T 4g22_A 229 TAVSIFKLTREQISALKAKSKEDG---N--TISYSSYEMLAGHVWRCACKARGLEV-DQGTKLYIATDGRARLRPSLPPG 302 (439)
T ss_dssp EEEEEEEECHHHHHHHHHGGGGGG---C--CCCCCHHHHHHHHHHHHHHHHTTCCT-TCEEEEEEEEECTTTSSSCCCTT
T ss_pred ceEEEEEECHHHHHHHHHHhhccC---C--CCCccHHHHHHHHHHHHHHHhcCCCC-CCcEEEEEEEcccCCCCCCCCCC
Confidence 899999999999999999997532 1 36799999999999999999998877 78999999999999999999999
Q ss_pred ccCcceeee-e-eccCc-----cc--hHHHHHHHHhhhhHHHhhhccCCchhhHHHHHHHHH---HHhh---cCCCcceE
Q 043811 305 CIGNLYHAV-T-CTANK-----TS--ARNINQFTKMVSDDFVRKVYQDGGIVFVNQYKEAVE---EIMK---GDNGVRLF 369 (448)
Q Consensus 305 Y~GN~~~~~-~-~~~~~-----l~--A~~IR~ai~~v~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~ 369 (448)
||||++..+ + ++++| |+ |..||++|+++++||+++.++ |++... .+.. .... ..+
T Consensus 303 Y~GN~v~~~~~~~~~~el~~~~L~~~A~~Ir~ai~~~~~e~~~~~~~---------~~~~~~~~~~~~~~~~~~~~-~~~ 372 (439)
T 4g22_A 303 YFGNVIFTATPIAIAGDLEFKPVWYAASKIHDALARMDNDYLRSALD---------YLELQPDLKALVRGAHTFKC-PNL 372 (439)
T ss_dssp BCSCCEEEECCEEEHHHHHHSCHHHHHHHHHHHHHTCSHHHHHHHHH---------HHHTCSCSTTCCCCHHHHCT-TCE
T ss_pred cccceeehhhcceEHHHHhhCcHHHHHHHHHHHHHhhCHHHHHHHHH---------HHHhCccchhhcccCCcCcC-CcE
Confidence 999999999 7 88876 44 999999999999999999876 222110 0000 0112 359
Q ss_pred EEeccCCCCCcccccccccccceeccc-cCCCEEEEeecCCC-CeEEEEEeCCccchhhhcc
Q 043811 370 GFTGVIGLPFYEPDFGWGKPVWSTTAM-SLNNIAVLLGTRDG-KGVEAWVGLPINDMPKFEQ 429 (448)
Q Consensus 370 ~~ssw~~~~~y~~DFG~G~P~~~~~~~-~~~g~~~i~p~~~~-~g~ev~v~L~~~~m~~l~~ 429 (448)
++|||.++++|++|||||||+++++.. +.+|.++++|++++ ||++|.|+|++++|++|++
T Consensus 373 ~vssw~r~~~y~~DFGwGkP~~~~~~~~~~~g~~~~~p~~~~~ggi~v~v~L~~~~m~~f~~ 434 (439)
T 4g22_A 373 GITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFILPSPTNDGSMSVAISLQGEHMKLFQS 434 (439)
T ss_dssp EEEECTTSCTTCCCCSSCCCSEEEESSCCSTTEEEEEECTTCSSCEEEEEEEEHHHHHHHHH
T ss_pred EEeecCcCCccccccCCCCcceeeccccCCCcEEEEeecCCCCCcEEEEEECCHHHHHHHHH
Confidence 999999999999999999999999877 77899999998754 4899999999999999986
No 3
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=1e-71 Score=574.27 Aligned_cols=403 Identities=21% Similarity=0.337 Sum_probs=315.2
Q ss_pred cEEEEEeeeEeCCCCCCCCCccccCCcccccCc-CccceEEEEecCCCCCCCCCCCC--chhHHHHHHHHHHHhhccccc
Q 043811 2 QLRIISKKIIKPSSPTPLHLKTHKLSLLDQLAP-DIYTSLLFFYNGPSRVYDETNTS--TNNVYHRLQSSLSKTLNLYYP 78 (448)
Q Consensus 2 ~v~~~~~~~V~P~~~t~~~~~~~~LS~lD~~~~-~~y~~~~~~f~~~~~~~~~~~~~--~~~~~~~L~~sL~~~L~~~p~ 78 (448)
+|+|+++++|+|+.|+++ .+.++||+||+.+. ..|++.+|||+.++ . .+ .+..+++||+||+++|++|||
T Consensus 6 ~v~v~~~~~V~P~~~~~~-~~~~~LS~lD~~~~~~~~~~~~~~y~~~~----~--~~~~~~~~~~~Lk~sLs~~L~~~~p 78 (454)
T 2e1v_A 6 ILTVLEQSQVSPPPDTLG-DKSLQLTFFDFFWLRSPPINNLFFYELPI----T--RSQFTETVVPNIKHSLSITLKHFYP 78 (454)
T ss_dssp CEEEEEEEEECCCTTSCC-CEEEECCHHHHTTTTCCCEEEEEEEECCC----C--HHHHHHTHHHHHHHHHHHHHTTCGG
T ss_pred eEEEEEEEEEeCCCCCCC-CceecCchHHhhhhccCCccEEEEEeCCC----C--cchhhHHHHHHHHHHHHHHhhhccc
Confidence 699999999999987544 36899999999854 56999999999654 2 01 345789999999999999999
Q ss_pred ccceee-c----CCeeEecC-CCCceEEEeecCCCCCccccccC-C-ChhhhhccCCCCCCCCC-CCCCCCceeEEEEee
Q 043811 79 FAGKLL-Q----DNYVVDCD-DSGIPFVETRGPSSISMSEVLKN-P-EMNTLQQLLPFNPNKKY-LSSTDDVNAAVQINH 149 (448)
Q Consensus 79 LaGrv~-~----~~~~i~~~-~~Gv~f~~a~~~~~~~l~dl~~~-p-~~~~~~~l~P~~~~~~~-~~~~~~Pll~vQvt~ 149 (448)
|||||. . |+++|+|+ ++||.|++|++ +.+++|+... + ....++.|+|..+.... ....+.|++.+|||+
T Consensus 79 lAGRl~~~~~~~g~~~i~c~~~~gv~fv~A~~--~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~ 156 (454)
T 2e1v_A 79 FVGKLVVYPAPTKKPEICYVEGDSVAVTFAEC--NLDLNELTGNHPRNCDKFYDLVPILGESTRLSDCIKIPLFSVQVTL 156 (454)
T ss_dssp GGSEEEECSSSSSCCEEEECTTCCEEEEEEEE--CSCGGGTSSSSCEEGGGGGGGSCCCCCCEECSSCEEEECEEEEEEE
T ss_pred cceeeeeccCCCCCEEEEECCCCcEEEEEEEe--CCCHHHhcCCCCCcchhhhcCCCCCCCcccccccccCceEEEEEEE
Confidence 999976 3 37999999 59999999999 8999999653 2 33456788887642110 012345999999999
Q ss_pred ecCCeEEEeccchhhccchhhHHHHHHHHHHHhc-CCC-C----cccccCCCCccCCcccCCCCCCCccccc--------
Q 043811 150 FDCGGVAIGLNFRHIVADGAASVGFIQNWAKLHS-SDD-N----SIINYKHTVVDCTDTFPPNQEISSYARR-------- 215 (448)
Q Consensus 150 ~~cGG~~l~~~~~H~v~Dg~g~~~fl~~wA~~~r-g~~-~----~~~~~~~P~~dr~~l~~~~~~~p~~~~~-------- 215 (448)
|+|||++||+++||.++||.|+.+|+++||++|| |.. . +.+ .|.+|| .+..|..+.+....+
T Consensus 157 f~cgG~~lg~~~~H~v~Dg~~~~~Fl~awa~~~r~g~~~~~~~~~~~---~P~~dr-~l~~p~~~~~~~~~~~~~~~~~~ 232 (454)
T 2e1v_A 157 FPNQGIAIGITNHHCLGDASTRFCFLKAWTSIARSGNNDESFLANGT---RPLYDR-IIKYPMLDEAYLKRAKVESFNED 232 (454)
T ss_dssp ETTTEEEEEEEECGGGCCHHHHHHHHHHHHHHHHTTSCCHHHHHHSC---CCBCCC-CCCCHHHHHHHHHHTTCTTHHHH
T ss_pred ecCCcEEEEEEeeeeecchhHHHHHHHHHHHHhccCCCccccCCCCC---CCcccc-cCCCCCcchHHHHhhhccccccc
Confidence 9999999999999999999999999999999999 763 1 134 789999 553221000000000
Q ss_pred --cccccCCCCeeEEEEEecHHHHHHHHHHhhhcccccCCCCCCCCHhHHHHHHHHHHHHhhhcCcCCCCeeEEEEEecC
Q 043811 216 --INEWQRAPECVTKRFVFDGGKVAALRGEIIKKDASLSLNQYRPTRFEAVSGLIWDALIAMDREENVGSTCIASVPVNL 293 (448)
Q Consensus 216 --~~~~~~~~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~~~~~~~St~dal~A~iW~~~~rar~~~~~~~~~~l~~~vd~ 293 (448)
+.......+.+.++|+|++++|++||+++.++.++ ..++|+||+|+||+|||++||| + ++.+++.++||+
T Consensus 233 ~~~~~~~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~~----~~~~St~d~l~A~lWr~~~~Ar---~-~~~~~l~~~vd~ 304 (454)
T 2e1v_A 233 YVTQSLAGPSDKLRATFILTRAVINQLKDRVLAQLPT----LEYVSSFTVACAYIWSCIAKSR---N-DKLQLFGFPIDR 304 (454)
T ss_dssp CCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHCTT----CSCCCHHHHHHHHHHHHHHHHH---C-CSEEEEEEEEEC
T ss_pred cCcccCCCCCCceEEEEEECHHHHHHHHHHHhhcCCC----CCcccHHHHHHHHHHHHHhhhc---C-CCceEEEEEecc
Confidence 01111235678999999999999999999754211 2579999999999999999999 4 689999999999
Q ss_pred ccccCCCCCCCccCcceeee-e-eccCc------cc--hHHHHHHHHhhhhHHHhhhccCCchhhHHHHHHHHHHHhhcC
Q 043811 294 RNRMNPPLPEDCIGNLYHAV-T-CTANK------TS--ARNINQFTKMVSDDFVRKVYQDGGIVFVNQYKEAVEEIMKGD 363 (448)
Q Consensus 294 R~rl~pplP~~Y~GN~~~~~-~-~~~~~------l~--A~~IR~ai~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (448)
|+|++||+|++|+||++..+ + ++++| |+ |..||+++.+++++|++.++... ..+|++..+.+ .
T Consensus 305 R~rl~pplP~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~~~~~~~~~----~~~~~~~~~~~---~ 377 (454)
T 2e1v_A 305 RARMKPPIPTAYFGNCVGGCAAIAKTNLLIGKEGFITAAKLIGENLHKTLTDYKDGVLKDD----MESFNDLVSEG---M 377 (454)
T ss_dssp GGGSSSCCCTTBCSCCEEEEEEEEEGGGTSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC---------CHHHHHC---C
T ss_pred hhccCCCCCcccccceeeeEEeecchhhccccccHHHHHHHHHHHHHhhhhhhhHHHHHHH----HHHHHHHHHhh---c
Confidence 99999999999999999999 6 77775 33 99999999999877766655410 22344432222 2
Q ss_pred CCcceEEEeccCCCCCcccccccccccceeccc-cCCCEEEEeecCCCC-eEEEEEeCCccchhhhccCccccc
Q 043811 364 NGVRLFGFTGVIGLPFYEPDFGWGKPVWSTTAM-SLNNIAVLLGTRDGK-GVEAWVGLPINDMPKFEQDPGILT 435 (448)
Q Consensus 364 ~~~~~~~~ssw~~~~~y~~DFG~G~P~~~~~~~-~~~g~~~i~p~~~~~-g~ev~v~L~~~~m~~l~~d~e~~~ 435 (448)
.. ..+.+|||.++++|++|||||||+++++.. +.+|.++++|+++++ |++|.|+|++++|++|++ ||.+
T Consensus 378 ~~-~~~~vssw~~~~~y~~DFG~G~P~~v~~~~~~~~g~~~l~p~~~~~ggi~v~v~L~~~~m~~f~~--~~~~ 448 (454)
T 2e1v_A 378 PT-TMTWVSGTPKLRFYDMDFGWGKPKKLETVSIDHNGAISINSCKESNEDLEIGVCISATQMEDFVH--IFDD 448 (454)
T ss_dssp CS-EEEEEECCTTSCGGGCCSSSCSCSEEEEGGGGGSSEEEEEECSSCTTSEEEEEEEEHHHHHHHHH--HHHH
T ss_pred CC-ceEEEecCCCCCcccccccCccceEEEeeeeCCCCeEEEEecCCCCCCEEEEEEECHHHHHHHHH--HHHH
Confidence 23 359999999999999999999999999877 678999999987754 899999999999999965 6654
No 4
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=7.7e-72 Score=575.07 Aligned_cols=398 Identities=19% Similarity=0.321 Sum_probs=315.4
Q ss_pred EEEEEeeeEeCCCCCCCCCccccCCcccccCc-CccceEEEEecCCCCCCCCCCCC--chhHHHHHHHHHHHhhcccccc
Q 043811 3 LRIISKKIIKPSSPTPLHLKTHKLSLLDQLAP-DIYTSLLFFYNGPSRVYDETNTS--TNNVYHRLQSSLSKTLNLYYPF 79 (448)
Q Consensus 3 v~~~~~~~V~P~~~t~~~~~~~~LS~lD~~~~-~~y~~~~~~f~~~~~~~~~~~~~--~~~~~~~L~~sL~~~L~~~p~L 79 (448)
|+|+++++|+|+.|+++ .+.++||+||+.+. ..|++.+|||+.+. . .+ .+..+++||+||+++|++||||
T Consensus 2 v~v~~~~~V~P~~~~~~-~~~~~LS~lD~~~~~~~~~~~~~~y~~~~----~--~~~~~~~~~~~Lk~sLs~~L~~~~pl 74 (453)
T 2xr7_A 2 ASVIEQCQVVPSPGSAT-ELTLPLTYFDHVWLAFHRMRRILFYKLPI----S--RPDFVQTIIPTLKDSLSLTLKYYLPL 74 (453)
T ss_dssp CEEEEESCCCCCTTCCS-EEEEECCHHHHGGGGSCCEEEEEEEECCC----C--SHHHHHTHHHHHHHHHHHHHTTSGGG
T ss_pred eEEEEEEEecCCCCCCC-CceECCCHHHhhhhhcCCccEEEEEeCCC----C--CchhHHHHHHHHHHHHHHHhhhcccc
Confidence 89999999999987544 36799999999754 56999999999764 2 12 3467899999999999999999
Q ss_pred cceeec-----CCeeEecC-CCCceEEEeecCCCCCcccccc-C-CChhhhhccCCCCCCCCCC-CCCCCceeEEEEeee
Q 043811 80 AGKLLQ-----DNYVVDCD-DSGIPFVETRGPSSISMSEVLK-N-PEMNTLQQLLPFNPNKKYL-SSTDDVNAAVQINHF 150 (448)
Q Consensus 80 aGrv~~-----~~~~i~~~-~~Gv~f~~a~~~~~~~l~dl~~-~-p~~~~~~~l~P~~~~~~~~-~~~~~Pll~vQvt~~ 150 (448)
||||.. |+++|+|+ ++||.|++|++ +.+++++.. . +....+..|+|..+..... ...+.|++.+|||+|
T Consensus 75 AGRl~~~~~~~g~~~i~c~~~~gv~fv~A~~--~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f 152 (453)
T 2xr7_A 75 AGNVACPQDWSGYPELRYVTGNSVSVIFSES--DMDFNYLIGYHPRNTKDFYHFVPQLAEPKDAPGVQLAPVLAIQVTLF 152 (453)
T ss_dssp GSCCEEESSTTCCCEEEEETTCCCEEEEEEC--CSCHHHHTCSSCCCGGGGGGGSCCCCCCEEETTEEECCCEEEEEEEE
T ss_pred CeeEEccCCCCCCEEEEecCCCceEEEEEec--CCCHHHhhccCCCChhhhhcCCCCCCCcccccccccCCeEEEEEEEc
Confidence 999643 47999998 59999999999 899999965 2 2345667888876321000 012289999999999
Q ss_pred cCCeEEEeccchhhccchhhHHHHHHHHHHHhc-CCCC----cccccCCCCccCCcccCCCCCCC--ccccc---ccc-c
Q 043811 151 DCGGVAIGLNFRHIVADGAASVGFIQNWAKLHS-SDDN----SIINYKHTVVDCTDTFPPNQEIS--SYARR---INE-W 219 (448)
Q Consensus 151 ~cGG~~l~~~~~H~v~Dg~g~~~fl~~wA~~~r-g~~~----~~~~~~~P~~dr~~l~~~~~~~p--~~~~~---~~~-~ 219 (448)
+|||++||+++||.++||.|+.+|+++||++|| |... +.+ .|.+||+.+.+|. .++ .+..+ +.. .
T Consensus 153 ~cGG~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~r~G~~~~~~~~~~---~P~~dr~~l~~p~-~~~~~~~~~~~~~~~~~~ 228 (453)
T 2xr7_A 153 PNHGISIGFTNHHVAGDGATIVKFVRAWALLNKFGGDEQFLANEF---IPFYDRSVIKDPN-GVGMSIWNEMKKYKHMMK 228 (453)
T ss_dssp TTTEEEEEEEECTTTCCSHHHHHHHHHHHHHHHTTTCGGGSCGGG---SCBCCCSSSCCSS-CHHHHTTTTGGGCTTTSC
T ss_pred cCCcEEEEEeeeeeeechhHHHHHHHHHHHHhhcCCCcccCCCCC---CCccccccccCCC-CcchHHHHhccccCCccc
Confidence 999999999999999999999999999999999 7622 234 6899998877553 221 01101 110 0
Q ss_pred ----cCCCCeeEEEEEecHHHHHHHHHHhhhcccccCCCCCCCCHhHHHHHHHHHHHHhhhcC-----cCCCCeeEEEEE
Q 043811 220 ----QRAPECVTKRFVFDGGKVAALRGEIIKKDASLSLNQYRPTRFEAVSGLIWDALIAMDRE-----ENVGSTCIASVP 290 (448)
Q Consensus 220 ----~~~~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~~~~~~~St~dal~A~iW~~~~rar~~-----~~~~~~~~l~~~ 290 (448)
....+.+.++|+|++++|++||+.+.++.+ + ..++|+||+|+||+|+|++|||.. .+ ++++++.++
T Consensus 229 ~~~~~~~~~~~~~~f~f~~~~i~~Lk~~a~~~~~--~--~~~~St~~~l~A~lW~~~~~Ar~~~~~~~~~-~~~~~l~~~ 303 (453)
T 2xr7_A 229 MSDVVTPPDKVRGTFIITRHDIGKLKNLVLTRRP--K--LTHVTSFTVTCAYVWTCIIKSEAATGEEIDE-NGMEFFGCA 303 (453)
T ss_dssp CSCCCCCCSCCCEEEEECHHHHHHHHHHHHHHSC--C--CSCCCHHHHHHHHHHHHHHHHHHHTTCCCCT-TSEEEEEEE
T ss_pred cccccCCCCceEEEEEECHHHHHHHHHHHhhcCC--C--CCcccHHHHHHHHHHHHHHHHhccccccCCC-CcceEEEEE
Confidence 123467799999999999999999975321 1 258999999999999999999976 45 689999999
Q ss_pred ecCccccCCCCCCCccCcceeee-e-eccCc------cc--hHHHHHHHHh--hhhH-HHhhhccCCchhhHHHHHHHHH
Q 043811 291 VNLRNRMNPPLPEDCIGNLYHAV-T-CTANK------TS--ARNINQFTKM--VSDD-FVRKVYQDGGIVFVNQYKEAVE 357 (448)
Q Consensus 291 vd~R~rl~pplP~~Y~GN~~~~~-~-~~~~~------l~--A~~IR~ai~~--v~~~-~~~~~~~~~~~~~~~~~~~~~~ 357 (448)
||+|+|++||+|++||||++..+ + ++++| |+ |..||+++.+ ++++ |+++ + |++..+
T Consensus 304 vd~R~rl~pplP~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~e~~~~~--~---------~~~~~~ 372 (453)
T 2xr7_A 304 ADCRAQFNPPLPPSYFGNALVGYVARTRQVDLAGKEGFTIAVELIGEAIRKRMKDEEWILSG--S---------WFKEYD 372 (453)
T ss_dssp CCTTSCSSSCCCTTBCSCCCCEEEEEEEHHHHTSSSHHHHHHHHHHHHHTTSSSCHHHHHSS--C---------TTSCCC
T ss_pred ecccccCCCCCCcccccceeeeeeeeeeHHHhcCcchHHHHHHHHHHHHHhhccCCccchhh--H---------HHHHHH
Confidence 99999999999999999999999 6 66654 44 9999999999 5777 8887 4 111111
Q ss_pred HHhhcCCCcceEEEeccCCCCCcccccccccccceeccc-cCCC--EEEEeecCCCC-eEEEEEeCCccchhhhccCccc
Q 043811 358 EIMKGDNGVRLFGFTGVIGLPFYEPDFGWGKPVWSTTAM-SLNN--IAVLLGTRDGK-GVEAWVGLPINDMPKFEQDPGI 433 (448)
Q Consensus 358 ~~~~~~~~~~~~~~ssw~~~~~y~~DFG~G~P~~~~~~~-~~~g--~~~i~p~~~~~-g~ev~v~L~~~~m~~l~~d~e~ 433 (448)
.+ . ....+++|||.++++|++|||||||+++++.. +.+| .++++|+++++ |++|.|+|++++|++|++ ||
T Consensus 373 ~~---~-~~~~~~vssw~~~~~y~~DFG~G~P~~v~~~~~~~~g~~~~~l~~~~~~~ggi~v~v~L~~~~m~~f~~--~~ 446 (453)
T 2xr7_A 373 KV---D-AKRSLSVAGSPKLDLYAADFGWGRPEKLEFVSIDNDDGISMSLSKSKDSDGDLEIGLSLSKTRMNAFAA--MF 446 (453)
T ss_dssp CS---C-GGGEEEECSCSSCCGGGCCCSSCSCSEEEEGGGSSCSSCEEEEEECSSSTTCEEEEECCCHHHHHHHHH--HH
T ss_pred hh---c-cCCcEEEeccccCCccccccCCCcceEEEeeeecCCCceEEEEeecCCCCCCEEEEEEeCHHHHHHHHH--HH
Confidence 11 1 22469999999999999999999999999877 6778 88899877654 899999999999999965 66
Q ss_pred cc
Q 043811 434 LT 435 (448)
Q Consensus 434 ~~ 435 (448)
.+
T Consensus 447 ~~ 448 (453)
T 2xr7_A 447 TH 448 (453)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00 E-value=2.6e-65 Score=526.27 Aligned_cols=388 Identities=15% Similarity=0.154 Sum_probs=296.1
Q ss_pred ccCCcccccC--cCccceEEEEecCCCCCCCCCCCCchhHHHHHHHHHHHhhcccccccceeec--------CCeeEecC
Q 043811 24 HKLSLLDQLA--PDIYTSLLFFYNGPSRVYDETNTSTNNVYHRLQSSLSKTLNLYYPFAGKLLQ--------DNYVVDCD 93 (448)
Q Consensus 24 ~~LS~lD~~~--~~~y~~~~~~f~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrv~~--------~~~~i~~~ 93 (448)
++||.|||+. ++.|++.+|||+.++ . .+....+++||+||+++|++||||||||.. |+++|+|+
T Consensus 5 ~~Ls~lD~~~~~~~~y~~~~~~y~~~~----~--~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~i~~~ 78 (451)
T 2rkv_A 5 IQLDTLGQLPGLLSIYTQISLLYPVSD----S--SQYPTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFIVPF 78 (451)
T ss_dssp EECCGGGGCTTGGGCEEEEEEEEECSC----G--GGHHHHHHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEEEECC
T ss_pred ccCChhhcCccccccceeEEEEEECCC----C--CCHHHHHHHHHHHHHHHHHhCCceeEEEEECCCCCCCCCcEEEeec
Confidence 6999999997 689999999999643 2 134578999999999999999999999654 35899987
Q ss_pred CCCceEEEeecCCCC-----Ccccccc--CCChhhhh--ccCCCCCCCCC--C-CCCCCceeEEEEeeecCCeEEEeccc
Q 043811 94 DSGIPFVETRGPSSI-----SMSEVLK--NPEMNTLQ--QLLPFNPNKKY--L-SSTDDVNAAVQINHFDCGGVAIGLNF 161 (448)
Q Consensus 94 ~~Gv~f~~a~~~~~~-----~l~dl~~--~p~~~~~~--~l~P~~~~~~~--~-~~~~~Pll~vQvt~~~cGG~~l~~~~ 161 (448)
+.++.|+++++ +. +++++.. .|. ..++ .|.|....+.. + ...+.|++.+|||+| |||++||+++
T Consensus 79 ~~~~~~~va~~--~~d~~~p~~~~l~~~~~p~-~~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT~~-~GG~~lg~~~ 154 (451)
T 2rkv_A 79 EDVPRVVVKDL--RDDPSAPTIEGMRKAGYPM-AMFDENIIAPRKTLPIGPGTGPDDPKPVILLQLNFI-KGGLILTVNG 154 (451)
T ss_dssp CSSCEEEEEEC--TTCTTSCBHHHHHHHTSCG-GGSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEEEE-BTEEEEEEEE
T ss_pred CCCCeEEEEeC--CCCCCCCCHHHHHHcCCCh-hhcCHhhcCCcccCCCCcccCCCCCCceEEEEEEEe-cCceeeeeee
Confidence 77777998887 43 6777754 232 1221 24443311100 1 134589999999965 7999999999
Q ss_pred hhhccchhhHHHHHHHHHHHhcCCCCc---ccccCCCCccCCcccCCCC--------CCCccccccc---cccCCCCeeE
Q 043811 162 RHIVADGAASVGFIQNWAKLHSSDDNS---IINYKHTVVDCTDTFPPNQ--------EISSYARRIN---EWQRAPECVT 227 (448)
Q Consensus 162 ~H~v~Dg~g~~~fl~~wA~~~rg~~~~---~~~~~~P~~dr~~l~~~~~--------~~p~~~~~~~---~~~~~~~~~~ 227 (448)
||.++||.|+.+|+++||++|||...+ .. .|++||+.+.|... +++.+...+. ......+++.
T Consensus 155 ~H~v~Dg~g~~~Fl~awa~~~rg~~~~~~~~~---~p~~dr~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (451)
T 2rkv_A 155 QHGAMDMVGQDAVIRLLSKACRNDPFTEEEMT---AMNLDRKTIVPYLENYTIGPEVDHQIVKADVAGGDAVLTPVSASW 231 (451)
T ss_dssp ETTTCCHHHHHHHHHHHHHHHHTCCCCHHHHH---HTTCCSTTSSCCCTTCCCCGGGTTCBCCTTSCC-------CCEEE
T ss_pred hhccccHHHHHHHHHHHHHHhcCCCCCccccc---cccCchhhccccccccCCCccccccccCCCCCCCCCCCCCCCceE
Confidence 999999999999999999999997522 12 57888876554310 1122221111 1122456889
Q ss_pred EEEEecHHHHHHHHHHhhhcccccCCCCCCCCHhHHHHHHHHHHHHhhh-c-CcCCCCeeEEEEEecCccccCCCCCCCc
Q 043811 228 KRFVFDGGKVAALRGEIIKKDASLSLNQYRPTRFEAVSGLIWDALIAMD-R-EENVGSTCIASVPVNLRNRMNPPLPEDC 305 (448)
Q Consensus 228 ~~f~fs~~~l~~Lk~~a~~~~~~~~~~~~~~St~dal~A~iW~~~~rar-~-~~~~~~~~~l~~~vd~R~rl~pplP~~Y 305 (448)
++|+|++++|++||+++.++.+. ...++|+||+|+||+|||++||| . ..+ ++++++.++||+|+|++ +|.+|
T Consensus 232 ~~f~f~~~~i~~LK~~a~~~~~~---~~~~~St~d~l~A~~Wr~~~~Ar~~~~~~-~~~~~l~~~vd~R~rl~--lP~~y 305 (451)
T 2rkv_A 232 AFFTFSPKAMSELKDAATKTLDA---STKFVSTDDALSAFIWKSASRVRLERIDG-SAPTEFCRAVDARPAMG--VSNNY 305 (451)
T ss_dssp EEEEECHHHHHHHHHHHHTTCCT---TCSCCCHHHHHHHHHHHHHHHHHTTTSCT-TSEEEEEEEEECHHHHT--CCTTC
T ss_pred EEEEECHHHHHHHHHHHhhhccC---CCCCccHHHHHHHHHHHHHHHHHhccCCC-CCceEEEEEecccccCC--CCCCC
Confidence 99999999999999999854211 13679999999999999999998 3 445 78999999999999998 89999
Q ss_pred cCcceeee-e-eccCc-----cc--hHHHHHHHHhhhhHH-HhhhccCCchhhHHHHHHHHH---HHhhc--CCCcceEE
Q 043811 306 IGNLYHAV-T-CTANK-----TS--ARNINQFTKMVSDDF-VRKVYQDGGIVFVNQYKEAVE---EIMKG--DNGVRLFG 370 (448)
Q Consensus 306 ~GN~~~~~-~-~~~~~-----l~--A~~IR~ai~~v~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~ 370 (448)
+||++..+ + ++++| |+ |..||+++.+++.+| ++++++ +++... .+.+. ......++
T Consensus 306 ~GN~~~~~~~~~~~~el~~~~L~~~a~~ir~ai~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~ 376 (451)
T 2rkv_A 306 PGLLQNMTYHNSTIGEIANESLGATASRLRSELDPASMRQRTRGLAT---------YLHNNPDKSNVSLTADADPSTSVM 376 (451)
T ss_dssp CSCCEEEEEEEEEHHHHHHSCHHHHHHHHHTTCCHHHHHHHHHHHHH---------HHHHCSCCTTBCTTTTCCTTTCEE
T ss_pred cccceeeecccCcHHHhccchHHHHHHHHHHHhcccCchhHHHHHHH---------HHhcCCCccccccccccCCCCCEE
Confidence 99999999 6 77776 44 999999999999888 888766 333211 11001 11123499
Q ss_pred EeccCCCCCcccccc--cccccceeccc--cCCCEEEEeecCCCCeEEEEEeCCccchhhhccCccccccccc
Q 043811 371 FTGVIGLPFYEPDFG--WGKPVWSTTAM--SLNNIAVLLGTRDGKGVEAWVGLPINDMPKFEQDPGILTYASF 439 (448)
Q Consensus 371 ~ssw~~~~~y~~DFG--~G~P~~~~~~~--~~~g~~~i~p~~~~~g~ev~v~L~~~~m~~l~~d~e~~~~~~~ 439 (448)
+|||+++++|++||| ||||++++.+. +.+|+++++|++.+||++|.|+|++++|++|++|+||++|++.
T Consensus 377 ~ssw~~~~~y~~DFG~gwG~P~~v~~~~~~~~~g~~~~~p~~~~ggi~v~v~L~~~~m~~f~~d~ef~~~~~~ 449 (451)
T 2rkv_A 377 LSSWAKVGLWDYDFGLGLGKPETVRRPIFEPVESLMYFMPKKPDGEFCAALSLRDEDMDRLKADKEWTKYAQY 449 (451)
T ss_dssp EEECTTCCGGGCCTTCSSCSCSEEECCBCSCCTTEEEECCCCTTSCEEEEEEEEHHHHHHHHHCHHHHTTCEE
T ss_pred EeccccCCccccccCCCCCCceEEEcCCccCCCCEEEEecCCCCCCEEEEEEeCHHHHHHHhcCHHHHhhhee
Confidence 999999999999998 79999998665 4689999998766678999999999999999999999999986
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=98.69 E-value=4.4e-06 Score=83.55 Aligned_cols=254 Identities=17% Similarity=0.092 Sum_probs=142.6
Q ss_pred ccccCCcccccCc--CccceEEEEecCCCCCCCCCCCCchhHHHHHHHHHHHhhcccccccceeecCCeeEecCCCCceE
Q 043811 22 KTHKLSLLDQLAP--DIYTSLLFFYNGPSRVYDETNTSTNNVYHRLQSSLSKTLNLYYPFAGKLLQDNYVVDCDDSGIPF 99 (448)
Q Consensus 22 ~~~~LS~lD~~~~--~~y~~~~~~f~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrv~~~~~~i~~~~~Gv~f 99 (448)
..+|||++.+.+. .+.+...+-++.+- ..++|++++.+++.++|.|-.++..+ ++.....
T Consensus 6 ~~~pls~~Q~~~~~~~y~~~~~~~l~g~l------------d~~~l~~A~~~lv~rh~~LRt~f~~~------~~~~~q~ 67 (422)
T 1q9j_A 6 VIRKLSHSEEVFAQYEVFTSMTIQLRGVI------------DVDALSDAFDALLETHPVLASHLEQS------SDGGWNL 67 (422)
T ss_dssp EEEECCHHHHHHHHTTCEEEEEEEEESCC------------CHHHHHHHHHHHHHHCGGGSEEEEEC------TTSSEEE
T ss_pred eeecCCHHHHHHHhcCceEEEEEEEecCC------------CHHHHHHHHHHHHHhCccceEEEEec------CCcceee
Confidence 4689999987432 23344444455443 38899999999999999999985431 0111222
Q ss_pred EEeecCCC-CCccccccCCChhhhhccCCCCCCCCCCCCCCCceeEEEEeeecCCeEEEeccchhhccchhhHHHHHHHH
Q 043811 100 VETRGPSS-ISMSEVLKNPEMNTLQQLLPFNPNKKYLSSTDDVNAAVQINHFDCGGVAIGLNFRHIVADGAASVGFIQNW 178 (448)
Q Consensus 100 ~~a~~~~~-~~l~dl~~~p~~~~~~~l~P~~~~~~~~~~~~~Pll~vQvt~~~cGG~~l~~~~~H~v~Dg~g~~~fl~~w 178 (448)
+....+.. +...|+........+.. .. . .-+ ...|++++.+.. ..++..|.+.+||.++||.|+..|++.|
T Consensus 68 v~~~~~~~~~~~~d~~~~~~~~~~~~---~~-~--~~d-~~~pl~r~~l~~-~~~~~~l~l~~hH~i~Dg~S~~~l~~~l 139 (422)
T 1q9j_A 68 VADDLLHSGICVIDGTAATNGSPSGN---AE-L--RLD-QSVSLLHLQLIL-REGGAELTLYLHHCMADGHHGAVLVDEL 139 (422)
T ss_dssp EECCSSSCCCEEEC---------------CC-C--CCC-TTTCSEEEEEEC-CSSSCEEEEEEEGGGCCHHHHHHHHHHH
T ss_pred eccCCCCCceEEEECCCCCcchhhhc---cc-C--ccC-CCCCcEEEEEEe-cCCCeEEEEEeceEEEchhhHHHHHHHH
Confidence 22221001 12222322111111111 11 0 112 458888888877 7788999999999999999999999999
Q ss_pred HHHhcC----CCCcccccCCCCcc--------CCccc--CCCC--CCCcc-----cc---cccc--ccCCCCeeEEEEEe
Q 043811 179 AKLHSS----DDNSIINYKHTVVD--------CTDTF--PPNQ--EISSY-----AR---RINE--WQRAPECVTKRFVF 232 (448)
Q Consensus 179 A~~~rg----~~~~~~~~~~P~~d--------r~~l~--~~~~--~~p~~-----~~---~~~~--~~~~~~~~~~~f~f 232 (448)
.+.+++ +.....+ ..+..+ +.... .+.. ..-.| .+ .|.. ...........+.+
T Consensus 140 ~~~Y~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~lp~~~~~~~~~~~~~~~~~l 218 (422)
T 1q9j_A 140 FSRYTDAVTTGDPGPIT-PQPTPLSMEAVLAQRGIRKQGLSGAERFMSVMYAYEIPATETPAVLAHPGLPQAVPVTRLWL 218 (422)
T ss_dssp HHHHHHHHHSSSCCCCC-CCCCCBCHHHHHHHSSCCC-----CTTSSTTTTCC-------------CCSBCCCCEEEECC
T ss_pred HHHHHHhhccCCCCCCC-CCCCCCCHHHHHHhcCCcccccchhhhhhhhhhcccCCCcccCCCCCCCCCCCCccceEEEe
Confidence 998872 2211110 011111 10000 0000 00011 00 0100 01112235678889
Q ss_pred cHHHHHHHHHHhhhcccccCCCCCCCCHhHHHHHHHHHHHHhhhcCcCCCCeeEEEEEecCccccCCCCCCCccCcceee
Q 043811 233 DGGKVAALRGEIIKKDASLSLNQYRPTRFEAVSGLIWDALIAMDREENVGSTCIASVPVNLRNRMNPPLPEDCIGNLYHA 312 (448)
Q Consensus 233 s~~~l~~Lk~~a~~~~~~~~~~~~~~St~dal~A~iW~~~~rar~~~~~~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~ 312 (448)
+.+..++||+.|.+ ..+|.+.++.|.+-..+.|-+. .. .....+.+++++|.+..|+++..=+.|.+.+
T Consensus 219 ~~~~~~~l~~~a~~---------~~~t~~~~l~aa~~~~l~r~~~-~~-~~~v~~g~~~~~R~~~~~~~~~~~~~~~vG~ 287 (422)
T 1q9j_A 219 SKQQTSDLMAFGRE---------HRLSLNAVVAAAILLTEWQLRN-TP-HVPIPYVYPVDLRFVLAPPVAPTEATNLLGA 287 (422)
T ss_dssp CHHHHHHHHHHHTT---------TTCCHHHHHHHHHHHHHHHHHT-CS-SCCEEEEEEEETTTTSSSCCCTTTBSCCEEE
T ss_pred CHHHHHHHHHHHHH---------hCCCHHHHHHHHHHHHHHhccc-CC-CceEEEeeeeecccccCCCCChhhhhhhhee
Confidence 99999999998872 3589999999987666665422 22 4678999999999987665542223444444
Q ss_pred e
Q 043811 313 V 313 (448)
Q Consensus 313 ~ 313 (448)
.
T Consensus 288 f 288 (422)
T 1q9j_A 288 A 288 (422)
T ss_dssp E
T ss_pred e
Confidence 4
No 7
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=98.16 E-value=0.00013 Score=73.26 Aligned_cols=238 Identities=11% Similarity=-0.002 Sum_probs=135.6
Q ss_pred HHHHHHHHHHHhhcccccccceeecCCeeEecCCCCceEEEeecCCCCCccccccCCCh-hhhhccC---CCCCCCCCCC
Q 043811 61 VYHRLQSSLSKTLNLYYPFAGKLLQDNYVVDCDDSGIPFVETRGPSSISMSEVLKNPEM-NTLQQLL---PFNPNKKYLS 136 (448)
Q Consensus 61 ~~~~L~~sL~~~L~~~p~LaGrv~~~~~~i~~~~~Gv~f~~a~~~~~~~l~dl~~~p~~-~~~~~l~---P~~~~~~~~~ 136 (448)
..++|++++.+++.+++.|--++..+ .| .+....+-...+.|+...++. ..+..++ -..++ +
T Consensus 34 d~~~L~~A~~~lv~rh~~LRt~f~~~--------~~--~v~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~f---d- 99 (436)
T 1l5a_A 34 DTTLLLRALHLTVSEIDLFRARFSAQ--------GE--LYWHPFSPPIDYQDLSIHLEAEPLAWRQIEQDLQRSS---T- 99 (436)
T ss_dssp CHHHHHHHHHHHHHTCGGGGEEECTT--------CC--EEECSSCCCCEEEECTTCTTHHHHHHHHHHHHHTSCC---C-
T ss_pred CHHHHHHHHHHHHHHhheeEEEEEec--------CC--eECCCcCCCccEEeCCCCCCHHHHHHHHHHHHhcCCC---C-
Confidence 38899999999999999998884431 12 111111001222233322221 1111111 01111 1
Q ss_pred CCCCceeEEEEeeecCCeEEEeccchhhccchhhHHHHHHHHHHHhc----CCCCcccccCCCCcc-----CCcccCCCC
Q 043811 137 STDDVNAAVQINHFDCGGVAIGLNFRHIVADGAASVGFIQNWAKLHS----SDDNSIINYKHTVVD-----CTDTFPPNQ 207 (448)
Q Consensus 137 ~~~~Pll~vQvt~~~cGG~~l~~~~~H~v~Dg~g~~~fl~~wA~~~r----g~~~~~~~~~~P~~d-----r~~l~~~~~ 207 (448)
....|++++.+.....+...|.+.+||.++||.|+..|++.+.+.++ |...... ..+..| +..+.....
T Consensus 100 l~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~ 177 (436)
T 1l5a_A 100 LIDAPITSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLSGQTPTAA--FKPYQSYLEEEAAYLTSHRY 177 (436)
T ss_dssp CBTSCSCEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHHTCCCCCC--CCCHHHHHHHHHHHHTSHHH
T ss_pred cCCCCCeEEEEEEEcCCEEEEEEeehhheecHhHHHHHHHHHHHHHHHHhcCCCCCCC--ccCHHHHHHHHHHhhccHhH
Confidence 34568888888777557899999999999999999999999999887 3321111 011110 000000000
Q ss_pred ------------CCCcccccccc-ccCCCCeeEEEEEecHHHHHHHHHHhhhcccccCCCCCCCCHhHHHHHHHHHHHHh
Q 043811 208 ------------EISSYARRINE-WQRAPECVTKRFVFDGGKVAALRGEIIKKDASLSLNQYRPTRFEAVSGLIWDALIA 274 (448)
Q Consensus 208 ------------~~p~~~~~~~~-~~~~~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~~~~~~~St~dal~A~iW~~~~r 274 (448)
+.|.....|.. ...........+.++.+..++|++.|.+ ..+|.+.++.|.+-..+.+
T Consensus 178 ~~~~~~W~~~l~~~~~~~~lp~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~---------~~~t~~~~l~aa~~~~L~~ 248 (436)
T 1l5a_A 178 WQDKQFWQGYLREAPDLTLTSATYDPQLSHAVSLSYTLNSQLNHLLLKLANA---------NQIGWPDALVALCALYLES 248 (436)
T ss_dssp HHHHHHHHHHHHTSCCCCBCCTTCCGGGCCEEEEEEECCHHHHHHHHHHHHH---------TTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCcccCCCCCCCCcccceeeEEecCHHHHHHHHHHHHH---------hCCCHHHHHHHHHHHHHHH
Confidence 00100000100 0112234567889999999999998873 3489999999986655555
Q ss_pred hhcCcCCCCeeEEEEEecCccccCCCCCCCccCcceeee-e-eccCc---cc--hHHHHHHHHh
Q 043811 275 MDREENVGSTCIASVPVNLRNRMNPPLPEDCIGNLYHAV-T-CTANK---TS--ARNINQFTKM 331 (448)
Q Consensus 275 ar~~~~~~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~~-~-~~~~~---l~--A~~IR~ai~~ 331 (448)
-.+ ....+.+++++|.. +--.+-+|+++... . ..... +. +..+++.+.+
T Consensus 249 ~~g-----~dv~ig~~~~~R~~---~~~~~~vG~f~n~lplr~~~~~~~t~~~~l~~v~~~~~~ 304 (436)
T 1l5a_A 249 AEP-----DAPWLWLPFMNRWG---SVAANVPGLMVNSLPLLRLSAQQTSLGNYLKQSGQAIRS 304 (436)
T ss_dssp HST-----TCCEEEEEECCCTT---SGGGGSCSCCCEEEEEECCCCTTCBHHHHHHHHHHHHHH
T ss_pred hhC-----CceEEeeecccCCC---hHHhcCcceEEEEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 543 24789999999965 12356777776666 4 44332 22 5555554443
No 8
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=98.12 E-value=0.00034 Score=72.06 Aligned_cols=245 Identities=13% Similarity=0.072 Sum_probs=141.8
Q ss_pred ccccCCccccc-------Cc--Ccc-ceEEEEecCCCCCCCCCCCCchhHHHHHHHHHHHhhcccccccceeec-C-Cee
Q 043811 22 KTHKLSLLDQL-------AP--DIY-TSLLFFYNGPSRVYDETNTSTNNVYHRLQSSLSKTLNLYYPFAGKLLQ-D-NYV 89 (448)
Q Consensus 22 ~~~~LS~lD~~-------~~--~~y-~~~~~~f~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrv~~-~-~~~ 89 (448)
..+|||+.-+. .+ ..| +...+-++..- ..++|++++.+++.+++.|--++.. + ++.
T Consensus 95 ~~~pls~~Q~~~~~~~~~~~~~~~y~~~~~~~l~g~l------------d~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~ 162 (520)
T 2jgp_A 95 AYYPVSSAQKRMYILDQFEGVGISYNMPSTMLIEGKL------------ERTRVEAAFQRLIARHESLRTSFAVVNGEPV 162 (520)
T ss_dssp SSEECCHHHHHHHHHHHHTCCTTTTBCCEEEEEEECC------------CHHHHHHHHHHHHHHCGGGGEEEEEETTEEE
T ss_pred CCCCCCHHHHHHHHHHhcCCCCCcccceEEEEECCCC------------CHHHHHHHHHHHHHHhHhheeEEEeeCCEEE
Confidence 46899986542 12 123 45555555443 3899999999999999999888443 1 110
Q ss_pred -EecCCCCceEEEeecCCCCCccccccCCChhhhhccCCCCCCCCCCCCCCCceeEEEEeeecCCeEEEeccchhhccch
Q 043811 90 -VDCDDSGIPFVETRGPSSISMSEVLKNPEMNTLQQLLPFNPNKKYLSSTDDVNAAVQINHFDCGGVAIGLNFRHIVADG 168 (448)
Q Consensus 90 -i~~~~~Gv~f~~a~~~~~~~l~dl~~~p~~~~~~~l~P~~~~~~~~~~~~~Pll~vQvt~~~cGG~~l~~~~~H~v~Dg 168 (448)
+......+ .+.+.++... ....+.... ..++ + ....|++++.+.....+...|.+.+||.++||
T Consensus 163 q~v~~~~~~---------~~~~~~~~~~-~~~~~~~~~-~~~f---d-l~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg 227 (520)
T 2jgp_A 163 QNIHEDVPF---------ALAYSEVTEE-EARELVSSL-VQPF---D-LEVAPLIRVSLLKIGEDRYVLFTDMHHSISDG 227 (520)
T ss_dssp EEECSCCCC---------CCEEEECCHH-HHHHHHHHT-CCCC---C-TTSSCCEEEEEEEEETTEEEEEEEEBGGGCCH
T ss_pred EEECCCCCC---------ceEEEeCCHH-HHHHHHHHh-cCCC---C-CCCCcceeEEEEEEcCCcEEEEEEccceeecH
Confidence 00011111 1111122100 000111111 1111 1 34578888887777657799999999999999
Q ss_pred hhHHHHHHHHHHHhcCCCCcccccCCCCcc-----CCcccC------------------CCCCCCccccccccccCCCCe
Q 043811 169 AASVGFIQNWAKLHSSDDNSIINYKHTVVD-----CTDTFP------------------PNQEISSYARRINEWQRAPEC 225 (448)
Q Consensus 169 ~g~~~fl~~wA~~~rg~~~~~~~~~~P~~d-----r~~l~~------------------~~~~~p~~~~~~~~~~~~~~~ 225 (448)
.|+..|++.+.+.+++...+.. ..+..| +..... +...+|.-. +.........
T Consensus 228 ~S~~~l~~el~~~Y~~~~l~~~--~~~~~d~~~~~~~~~~~~~~~~~~~yW~~~l~~~~~~~~lp~~~--~~~~~~~~~~ 303 (520)
T 2jgp_A 228 VSSGILLAEWVQLYQGDVLPEL--RIQYKDFAVWQQEFSQSAAFHKQEAYWLQTFADDIPVLNLPTDF--TRPSTQSFAG 303 (520)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCC--SCCHHHHHHHHHHHTTSHHHHHHHHHHHHHTSSCCCCCCCCCSS--CCCSSCCCBE
T ss_pred hHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHHHHHhhcChhhHHHHHHHHHHhCCCCCcCCCCCCC--CCCCCCCCCc
Confidence 9999999999999998631111 011111 100000 000111100 0001112234
Q ss_pred eEEEEEecHHHHHHHHHHhhhcccccCCCCCCCCHhHHHHHHHHHHHHhhhcCcCCCCeeEEEEEecCccccCCCCCCCc
Q 043811 226 VTKRFVFDGGKVAALRGEIIKKDASLSLNQYRPTRFEAVSGLIWDALIAMDREENVGSTCIASVPVNLRNRMNPPLPEDC 305 (448)
Q Consensus 226 ~~~~f~fs~~~l~~Lk~~a~~~~~~~~~~~~~~St~dal~A~iW~~~~rar~~~~~~~~~~l~~~vd~R~rl~pplP~~Y 305 (448)
....+.++.+..++|++.|.+ ..+|.+.++.|.+-..+.+-.+ .....+.+++++|..- --.+-
T Consensus 304 ~~~~~~l~~~~~~~l~~~a~~---------~~~T~~~~l~aa~a~~L~~~~~----~~dv~~g~~~~gR~~~---~~~~~ 367 (520)
T 2jgp_A 304 DQCTIGAGKALTEGLHQLAQA---------TGTTLYMVLLAAYNVLLAKYAG----QEDIIVGTPITGRSHA---DLEPI 367 (520)
T ss_dssp EEEEEECCHHHHHHHHHHHHH---------HTCCHHHHHHHHHHHHHHHHHT----CSCEEEEEEECCCCSG---GGTTC
T ss_pred cEEEEeCCHHHHHHHHHHHHH---------cCCCHHHHHHHHHHHHHHHhcC----CCCeEEEeccCCCCch---hhhcc
Confidence 567789999999999998873 2478999998876555554432 3568999999999752 23467
Q ss_pred cCcceeee
Q 043811 306 IGNLYHAV 313 (448)
Q Consensus 306 ~GN~~~~~ 313 (448)
+|+++...
T Consensus 368 vG~f~n~l 375 (520)
T 2jgp_A 368 VGMFVNTL 375 (520)
T ss_dssp CSCCCEEE
T ss_pred EEeeeeee
Confidence 78777666
No 9
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=98.06 E-value=0.00029 Score=72.04 Aligned_cols=220 Identities=11% Similarity=0.044 Sum_probs=124.4
Q ss_pred HHHHHHHHHHHhhcccccccceeec--CCeeEecCCCCceEEEeecCCCCCccccccCCCh-hhhh----ccC--CCCCC
Q 043811 61 VYHRLQSSLSKTLNLYYPFAGKLLQ--DNYVVDCDDSGIPFVETRGPSSISMSEVLKNPEM-NTLQ----QLL--PFNPN 131 (448)
Q Consensus 61 ~~~~L~~sL~~~L~~~p~LaGrv~~--~~~~i~~~~~Gv~f~~a~~~~~~~l~dl~~~p~~-~~~~----~l~--P~~~~ 131 (448)
..++|++++.+++.+++.|--++.. |+..+..... +.+.+. |+...+.. ..+. ... |..
T Consensus 48 d~~~L~~A~~~lv~rh~~LRt~f~~~~~~~~~v~~~~-~~~~~~---------d~~~~~~~~~~~~~~~~~~~~~~fd-- 115 (493)
T 4hvm_A 48 DDDRLAAAADEVLDAFPLLRVNFVDDDGLWMRTRENA-DALVRS---------DLRGHPDPQARCVELLRADRDRPTD-- 115 (493)
T ss_dssp CHHHHHHHHHHHHHHCGGGGEEEEESSSEEEEECSCC-CCEEEE---------ECTTSSSHHHHHHHHHHHHHSSCCC--
T ss_pred CHHHHHHHHHHHHHhchhceeEEEccCCEEEEecCCC-CCceEE---------ECCCCCchHHHHHHHHHHHhcCCCC--
Confidence 4899999999999999999888543 2221111111 222222 22221111 1121 111 222
Q ss_pred CCCCCCCCCceeEEEEeeecCCeEEEeccchhhccchhhHHHHHHHHHHHhcCCCCcccccCCCC---ccCC--cccCCC
Q 043811 132 KKYLSSTDDVNAAVQINHFDCGGVAIGLNFRHIVADGAASVGFIQNWAKLHSSDDNSIINYKHTV---VDCT--DTFPPN 206 (448)
Q Consensus 132 ~~~~~~~~~Pll~vQvt~~~cGG~~l~~~~~H~v~Dg~g~~~fl~~wA~~~rg~~~~~~~~~~P~---~dr~--~l~~~~ 206 (448)
....|++++.+.....+...|.+.+||.++||.|+..|++.+.+.+.|...+ .. ... +.+. .+....
T Consensus 116 -----l~~~pl~r~~l~~~~~~~~~l~l~~HH~i~Dg~S~~~l~~~l~~~Y~g~~~~-~~--~~~~~~~~~~~~~~~~~~ 187 (493)
T 4hvm_A 116 -----PERDPLVRLHLVRLSETDVVLGVVAHQMLLDARSRYMVLGAVWQAYYGRFRP-AQ--YRDFAEVADFHPLDRETV 187 (493)
T ss_dssp -----TTTSCSEEEEEEECSSSEEEEEEEEETTTCCHHHHHHHHHHHHHHHTTCCCG-GG--SBCGGGTTTCCTTCSHHH
T ss_pred -----CCCCCeEEEEEEEECCCcEEEEEecchhhccHHHHHHHHHHHHHHhCCCCCC-cC--HHHHHHHHhhhhcccChh
Confidence 3456888888877775678999999999999999999999999999776422 10 000 1111 010000
Q ss_pred C-CCCcc-----ccccc---cccCCCCeeEEEEEecHHHHHHHHHHhhhcccccCCCCCCCC--HhHHHHHHHHHHHHhh
Q 043811 207 Q-EISSY-----ARRIN---EWQRAPECVTKRFVFDGGKVAALRGEIIKKDASLSLNQYRPT--RFEAVSGLIWDALIAM 275 (448)
Q Consensus 207 ~-~~p~~-----~~~~~---~~~~~~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~~~~~~~S--t~dal~A~iW~~~~ra 275 (448)
. ..-.| ...+. ............+.++.+..++|++.|.+ ..+| .+.++.|.+-..+.+-
T Consensus 188 ~~~~~~~W~~~l~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~---------~~vt~~~~~~l~aa~a~~L~~~ 258 (493)
T 4hvm_A 188 RVARHRWWSRRLPALPVRGGDGGPVGPPETSRLRVPGSRWQALTEPGGP---------LGGNGSLAMAALTAWWLWTQGA 258 (493)
T ss_dssp HHHHHHHHHHHGGGSCCCC-------CCEEEEEEEEHHHHHHHHCC---------------CHHHHHHHHHHHHHHHC--
T ss_pred hHHHHHHHHHhccCCCCCCCCCCCCCCCeeEEEEcCHHHHHHHHHHHHH---------cCCCchHHHHHHHHHHHHHHHh
Confidence 0 00000 00000 00011125677889999999999987762 3478 9999999765555444
Q ss_pred hcC--------cCCCCeeEEEEEecCccccCCCCCCCccCcceeee
Q 043811 276 DRE--------ENVGSTCIASVPVNLRNRMNPPLPEDCIGNLYHAV 313 (448)
Q Consensus 276 r~~--------~~~~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~~ 313 (448)
+.. .. .....+.+++++|.. +--.+.+|+++...
T Consensus 259 ~~~~~~~~~~~~g-~~dv~~g~~~~gR~~---~~~~~~vG~f~n~l 300 (493)
T 4hvm_A 259 GTGTDTGAGTGTG-KDSLYLSTEVDLRDH---LQLGSVVGPLTDRV 300 (493)
T ss_dssp ---------------CEEEEEEEEEHHHH---TTCCSBCSCCEEEE
T ss_pred hhcccccccCcCC-CCCEEEEeeccCCCC---cchhcCeEeeecee
Confidence 110 12 367899999999966 23457788877766
No 10
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=97.87 E-value=0.0098 Score=59.85 Aligned_cols=270 Identities=10% Similarity=0.024 Sum_probs=148.5
Q ss_pred ccccCCccccc-----Cc-CccceEEEEecCCCCCCCCCCCCchhHHHHHHHHHHHhhcccccccceeec--CCee-Eec
Q 043811 22 KTHKLSLLDQL-----AP-DIYTSLLFFYNGPSRVYDETNTSTNNVYHRLQSSLSKTLNLYYPFAGKLLQ--DNYV-VDC 92 (448)
Q Consensus 22 ~~~~LS~lD~~-----~~-~~y~~~~~~f~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrv~~--~~~~-i~~ 92 (448)
..+|||+..+. .+ .......+.|+... . ...++|+++|.+++.+++.|--++.. |++. +..
T Consensus 16 ~~~pls~~Q~~~~~~~~~~~~~y~~~~~~~l~g----~------ld~~~L~~Al~~lv~rh~~LRt~f~~~~~~~~q~v~ 85 (466)
T 2xhg_A 16 GNVPLTPIQKWFFGKNFTNTGHWNQSSVLYRPE----G------FDPKVIQSVMDKIIEHHDALRMVYQHENGNVVQHNR 85 (466)
T ss_dssp EECCCCHHHHHHHHTTCTTTTCBEEEEEEEETT----C------CCHHHHHHHHHHHHHHSGGGGEEEECGGGCCEEEEC
T ss_pred CCCCCCHHHHHHHhCCCCCcCcceeEEEEEcCC----C------CCHHHHHHHHHHHHHhChHhheEEecCCCceeeecc
Confidence 46899987652 22 11223333444333 1 24899999999999999999888554 2211 111
Q ss_pred C--CCCceEEEeecCCCCCccccccCCCh-hhhh----cc-CCCCCCCCCCCCCCCceeEEEEeeecCCeEEEeccchhh
Q 043811 93 D--DSGIPFVETRGPSSISMSEVLKNPEM-NTLQ----QL-LPFNPNKKYLSSTDDVNAAVQINHFDCGGVAIGLNFRHI 164 (448)
Q Consensus 93 ~--~~Gv~f~~a~~~~~~~l~dl~~~p~~-~~~~----~l-~P~~~~~~~~~~~~~Pll~vQvt~~~cGG~~l~~~~~H~ 164 (448)
. ...+.+.+. |+....+. ..+. .+ -|.. ....|++++.+.... ++-.|-+.+||.
T Consensus 86 ~~~~~~~~~~~~---------d~~~~~~~~~~~~~~~~~~~~~fd-------l~~~pl~r~~l~~~~-~~~~l~l~~HH~ 148 (466)
T 2xhg_A 86 GLGGQLYDFFSY---------NLTAQPDVQQAIEAETQRLHSSMN-------LQEGPLVKVALFQTL-HGDHLFLAIHHL 148 (466)
T ss_dssp CSSSCCCEEEEE---------ECTTCSCHHHHHHHHHHHHHTTCC-------TTTCCCEEEEEEEET-TEEEEEEEEEGG
T ss_pred ccccccceeEEE---------ecCCcccHHHHHHHHHHHHHhccC-------CCCCCeEEEEEEEcC-CCCEEEEEeeee
Confidence 1 111222111 22111111 1111 11 1222 345788888887777 444577999999
Q ss_pred ccchhhHHHHHHHHHHHhcC----CCCcccccCCCCcc-----CCcccCC---C--------------CCCCcccccccc
Q 043811 165 VADGAASVGFIQNWAKLHSS----DDNSIINYKHTVVD-----CTDTFPP---N--------------QEISSYARRINE 218 (448)
Q Consensus 165 v~Dg~g~~~fl~~wA~~~rg----~~~~~~~~~~P~~d-----r~~l~~~---~--------------~~~p~~~~~~~~ 218 (448)
++||.|+..|++.+.+.+++ ......+...+..| +..+... . ..+|.-. +..
T Consensus 149 i~Dg~S~~~l~~el~~~Y~~~~~g~~~~l~~~~~~y~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~~~lp~~~--~~~ 226 (466)
T 2xhg_A 149 VVDGISWRILFEDLATGYAQALAGQAISLPEKTDSFQSWSQWLQEYANEADLLSEIPYWESLESQAKNVSLPKDY--EVT 226 (466)
T ss_dssp GCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCSCHHHHHHHHHHHTTSHHHHTTHHHHHHHHHHCCCCCCCCSS--CCS
T ss_pred eechhhHHHHHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHHHhcCccchhhhHHHHHhhccCCcccCCccc--ccc
Confidence 99999999999999998763 32111100011100 0000000 0 0111000 000
Q ss_pred ccCCCCeeEEEEEecHHHHHHHHHHhhhcccccCCCCCCCCHhHHHHHHHHHHHHhhhcCcCCCCeeEEEEEecCccccC
Q 043811 219 WQRAPECVTKRFVFDGGKVAALRGEIIKKDASLSLNQYRPTRFEAVSGLIWDALIAMDREENVGSTCIASVPVNLRNRMN 298 (448)
Q Consensus 219 ~~~~~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~~~~~~~St~dal~A~iW~~~~rar~~~~~~~~~~l~~~vd~R~rl~ 298 (448)
...........+.++.+..++|++.+.+ ...+|.++++.|.+-..+.+-.+ .....+.+++++|....
T Consensus 227 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~--------~~~~t~~~~llaa~~~~l~~~~~----~~dv~ig~~~~gR~~~~ 294 (466)
T 2xhg_A 227 DCKQKSVRNMRIRLHPEETEQLLKHANQ--------AYQTEINDLLLAALGLAFAEWSK----LAQIVIHLEGHGREDII 294 (466)
T ss_dssp SCBGGGEEEEEEECCHHHHHHHHHTGGG--------TTTCCHHHHHHHHHHHHHHHHHC----CSEEEEEEEECCCCSCS
T ss_pred ccccccceEEEEEcCHHHHHHHHHHhHH--------hhCCCHHHHHHHHHHHHHHHHhC----CCceEEEecCCCCCccc
Confidence 0111234567789999999999987752 13478999999886655555432 35689999999997642
Q ss_pred C-CCCCCccCcceeee-e-eccCc---cc--hHHHHHHHHhh
Q 043811 299 P-PLPEDCIGNLYHAV-T-CTANK---TS--ARNINQFTKMV 332 (448)
Q Consensus 299 p-plP~~Y~GN~~~~~-~-~~~~~---l~--A~~IR~ai~~v 332 (448)
+ +--.+-+|+++... . ..... +. +..|++.+..+
T Consensus 295 ~~~~~~~~vG~f~n~lplr~~~~~~~~~~~~l~~v~~~~~~~ 336 (466)
T 2xhg_A 295 EQANVARTVGWFTSQYPVLLDLKQTAPLSDYIKLTKENMRKI 336 (466)
T ss_dssp TTCCCTTCCSCCCEEEEEEEECSCCCSHHHHHHHHHHHHHHS
T ss_pred cCCCccccccceeeeccEEEecCCCCCHHHHHHHHHHHHHhC
Confidence 1 12346777777666 4 43322 32 66666666554
No 11
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=97.70 E-value=0.0031 Score=72.35 Aligned_cols=224 Identities=12% Similarity=0.078 Sum_probs=128.9
Q ss_pred HHHHHHHHHHHhhcccccccceeecCCeeEecCCC-CceEEEeecCCCCCc--cccccCCCh---hhhhcc------CCC
Q 043811 61 VYHRLQSSLSKTLNLYYPFAGKLLQDNYVVDCDDS-GIPFVETRGPSSISM--SEVLKNPEM---NTLQQL------LPF 128 (448)
Q Consensus 61 ~~~~L~~sL~~~L~~~p~LaGrv~~~~~~i~~~~~-Gv~f~~a~~~~~~~l--~dl~~~p~~---~~~~~l------~P~ 128 (448)
..++|++++.+++.+++.|--++... .+. .+..+.... ...+ .|+...+.. ..+..+ -|.
T Consensus 48 d~~~l~~A~~~lv~rH~~LRt~f~~~------~~~~p~Q~v~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~f 119 (1304)
T 2vsq_A 48 NIKCLEESMNVIMDRYDVFRTVFIHE------KVKRPVQVVLKKR--QFHIEEIDLTHLTGSEQTAKINEYKEQDKIRGF 119 (1304)
T ss_dssp CHHHHHHHHHHHHHHCGGGGEEEECS------SCSSCEEEEESCC--CCCEEEEECTTSCHHHHHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHhhhhceEEEEEc------CCCeEEEEECCCC--CCceEEEECCCCCchhHHHHHHHHHHHHhcCCC
Confidence 38999999999999999998884431 011 122222222 2222 233322211 112111 132
Q ss_pred CCCCCCCCCCCCceeEEEEeeecCCeEEEeccchhhccchhhHHHHHHHHHHHhcCC---CCcccccCCCCccCCc-ccC
Q 043811 129 NPNKKYLSSTDDVNAAVQINHFDCGGVAIGLNFRHIVADGAASVGFIQNWAKLHSSD---DNSIINYKHTVVDCTD-TFP 204 (448)
Q Consensus 129 ~~~~~~~~~~~~Pll~vQvt~~~cGG~~l~~~~~H~v~Dg~g~~~fl~~wA~~~rg~---~~~~~~~~~P~~dr~~-l~~ 204 (448)
+ ....|++++.+.....+...|.+.+||.++||.|+..|++.+++++++. .....+...+.-|-.. +..
T Consensus 120 d-------l~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~~~~g~~~~l~~~~~y~d~~~~~~~ 192 (1304)
T 2vsq_A 120 D-------LTRDIPMRAAIFKKAEESFEWVWSYHHIILDGWCFGIVVQDLFKVYNALREQKPYSLPPVKPYKDYIKWLEK 192 (1304)
T ss_dssp C-------TTTSCSEEEEEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCTHHHHHHHHT
T ss_pred C-------CCCCCcEEEEEEEECCCcEEEEEecCceeechhhHHHHHHHHHHHHHHhhcCCCCCCCCcccHHHHHHHHhc
Confidence 2 3457899888888776789999999999999999999999999987641 1111100011111000 000
Q ss_pred CCC------------CCCc---cccccccccCCCCeeEEEEEecHHHHHHHHHHhhhcccccCCCCCCCCHhHHHHHHHH
Q 043811 205 PNQ------------EISS---YARRINEWQRAPECVTKRFVFDGGKVAALRGEIIKKDASLSLNQYRPTRFEAVSGLIW 269 (448)
Q Consensus 205 ~~~------------~~p~---~~~~~~~~~~~~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~~~~~~~St~dal~A~iW 269 (448)
... +.|. +...+.............+.++++..++||+.|.+ ..+|.+.+|.|.+-
T Consensus 193 ~~~~~~~~yW~~~L~~~~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~a~~---------~~~T~~~vllaa~a 263 (1304)
T 2vsq_A 193 QDKQASLRYWREYLEGFEGQTTFAEQRKKQKDGYEPKELLFSPSEAETKAFTELAKS---------QHTTLSTALQAVWS 263 (1304)
T ss_dssp SCHHHHHHHHHHHHTTCCCCCTTTTTCCCSSCCCCEEEEEECCCHHHHHHHHHHHHH---------TTCCHHHHHHHHHH
T ss_pred chhhHHHHHHHHHhCCCCccccCCCCCCccccccCcceEEEecCHHHHHHHHHHHHH---------cCCCHHHHHHHHHH
Confidence 000 0100 00000000112234567788999999999999883 34789999988754
Q ss_pred HHHHhhhcCcCCCCeeEEEEEecCccccCCCCCCCccCcceeee
Q 043811 270 DALIAMDREENVGSTCIASVPVNLRNRMNPPLPEDCIGNLYHAV 313 (448)
Q Consensus 270 ~~~~rar~~~~~~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~~ 313 (448)
..+.|-.+ .+...+..++.+|.+-.|.+ .+-+|+.+-..
T Consensus 264 ~~L~r~tg----~~dvv~G~pvsgR~~~~~~~-~~~vG~fvntl 302 (1304)
T 2vsq_A 264 VLISRYQQ----SGDLAFGTVVSGRPAEIKGV-EHMVGLFINVV 302 (1304)
T ss_dssp HHHHHHHT----CSEEEEEEEECCCCTTSTTG-GGCCSSCCEEE
T ss_pred HHHHHhcC----CCCEEEEEEeCCCCccchhh-hcccccceeEE
Confidence 44444332 35789999999997532222 46677766665
No 12
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=97.29 E-value=0.0032 Score=64.82 Aligned_cols=151 Identities=13% Similarity=0.037 Sum_probs=95.0
Q ss_pred eEEEeccchhhccchhhHHHHHHHHHHHhcCCC---CcccccCCCCcc----CCcccCCCC---CCCc------ccc---
Q 043811 154 GVAIGLNFRHIVADGAASVGFIQNWAKLHSSDD---NSIINYKHTVVD----CTDTFPPNQ---EISS------YAR--- 214 (448)
Q Consensus 154 G~~l~~~~~H~v~Dg~g~~~fl~~wA~~~rg~~---~~~~~~~~P~~d----r~~l~~~~~---~~p~------~~~--- 214 (448)
-.-|.+.+||.++||.|...|++.+=+...... .... .|.++ ...|.||-. .+|. ...
T Consensus 177 ~~~lv~~~~H~~~DG~g~~~f~~~ll~~L~~~~~~~~~~~---~~~~~~g~E~~~L~P~~e~~~~~p~~~~~~e~~~~~~ 253 (519)
T 3fot_A 177 TVEILFHSNHLFWDGIGCRKFVGDLFRLVGSYIGRSDSRE---MKKIQWGQEIKNLSPPVVDSLKLDINTLGSEFDDKCT 253 (519)
T ss_dssp EEEEEEEECGGGCCHHHHHHHHHHHHHHHTTSTTC-CGGG---SCCCCTTTTGGGSCCCTGGGBSSCGGGCCHHHHHHHH
T ss_pred eEEEEEEeCceeEchHhHHHHHHHHHHHHHhhhccCCccC---CCcCCCCcccccCCcCHHHHhCCCCCCCCHHHHHHHH
Confidence 467788899999999999999999887765321 0111 23332 112333211 1121 000
Q ss_pred ---------ccc----cccCCCCeeEEEEEecHHHHHHHHHHhhhcccccCCCCCCCCHhHHHHHHHHHHHHhhhcC--c
Q 043811 215 ---------RIN----EWQRAPECVTKRFVFDGGKVAALRGEIIKKDASLSLNQYRPTRFEAVSGLIWDALIAMDRE--E 279 (448)
Q Consensus 215 ---------~~~----~~~~~~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~~~~~~~St~dal~A~iW~~~~rar~~--~ 279 (448)
.+. .......-....+.|++++.++|++.|.+.. +..+|-+.+|.|.+-.++.+.... .
T Consensus 254 ~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~ls~~~t~~L~~~ck~~~------~~g~Tvt~~l~Aa~~~al~~~~~~~~~ 327 (519)
T 3fot_A 254 EYTSALVANYKSRGMKFQPGLALPRCVIHKLSADESIDIVKAVKTRL------GPGFTISHLTQAAIVLALLDHLKPNDL 327 (519)
T ss_dssp HHHHHHHHHHHSCCSBCCCCCCCEEEEEEECCHHHHHHHHHHHHHHT------CTTCCHHHHHHHHHHHHHHHHC----C
T ss_pred HHHHHhhcCCCcccCCCCCCCCCcceEEEEcCHHHHHHHHHHHHhcC------CCCeeHHHHHHHHHHHHHHhhcCCccc
Confidence 000 0011123445778999999999999998532 346899999988777666653221 1
Q ss_pred CCCCeeEEEEEecCccccCCCCCCCccCcceeee
Q 043811 280 NVGSTCIASVPVNLRNRMNPPLPEDCIGNLYHAV 313 (448)
Q Consensus 280 ~~~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~~ 313 (448)
.........++||+|+++.++.-.+|||.+....
T Consensus 328 ~~~~~~~~~~pvnlR~~l~~~~~~n~~~~~~~~~ 361 (519)
T 3fot_A 328 SDDEVFISPTSVDGRRWLREDIASNFYAMCQTAA 361 (519)
T ss_dssp CTTCCEEEEEEEECGGGBCHHHHTSCCSCCEEEE
T ss_pred CCCccEEEEeeeeccccCCCcccccccceeeeee
Confidence 1024688999999999997655568888887766
No 13
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=69.59 E-value=3 Score=37.17 Aligned_cols=44 Identities=16% Similarity=0.237 Sum_probs=32.6
Q ss_pred CceeEEEEeeecCCe--EEEeccchhhccchhhHHHHHHHHHHHhc
Q 043811 140 DVNAAVQINHFDCGG--VAIGLNFRHIVADGAASVGFIQNWAKLHS 183 (448)
Q Consensus 140 ~Pll~vQvt~~~cGG--~~l~~~~~H~v~Dg~g~~~fl~~wA~~~r 183 (448)
.|++.+=-..-+.|. +-|++++||.++||.-...|++.+.+...
T Consensus 164 ~PIi~~G~~~~~~~~~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 209 (213)
T 3cla_A 164 APIITMAKYQQEGDRLLLPLSVQVHHAVCDGFHVARFINRLQELCN 209 (213)
T ss_dssp SCEEEEECCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred ccEEEeeEEEEECCeEEEEEEEEEcccccChHHHHHHHHHHHHHHH
Confidence 587754211112233 68899999999999999999999998764
No 14
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=68.28 E-value=3.4 Score=37.01 Aligned_cols=44 Identities=14% Similarity=0.092 Sum_probs=31.4
Q ss_pred CCceeEEEEeeecCCe--EEEeccchhhccchhhHHHHHHHHHHHh
Q 043811 139 DDVNAAVQINHFDCGG--VAIGLNFRHIVADGAASVGFIQNWAKLH 182 (448)
Q Consensus 139 ~~Pll~vQvt~~~cGG--~~l~~~~~H~v~Dg~g~~~fl~~wA~~~ 182 (448)
..|++.+=-..-+.|. +-|++++||.++||.-...|++.+.+..
T Consensus 171 ~~PIi~~Gk~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~l 216 (217)
T 2i9d_A 171 NYPLLNAGKAIIREGRLVMPIAMTIHHGFIDGHHLSLFYKKVEDFL 216 (217)
T ss_dssp SSCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred eEEEEecceEEEECCcEEEEEEEEecchhhChHHHHHHHHHHHHHh
Confidence 3687754111112133 6789999999999999999999998754
No 15
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=67.70 E-value=3.5 Score=36.94 Aligned_cols=44 Identities=9% Similarity=0.092 Sum_probs=32.5
Q ss_pred CceeEEEEeeecCCe--EEEeccchhhccchhhHHHHHHHHHHHhc
Q 043811 140 DVNAAVQINHFDCGG--VAIGLNFRHIVADGAASVGFIQNWAKLHS 183 (448)
Q Consensus 140 ~Pll~vQvt~~~cGG--~~l~~~~~H~v~Dg~g~~~fl~~wA~~~r 183 (448)
.|++.+--..-+.|. +-|++++||.+.||.-...|++.+.+.+.
T Consensus 168 ~pIi~~G~~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 213 (219)
T 1q23_A 168 APVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCD 213 (219)
T ss_dssp SCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEecccEEEECCcEEEEEEEEEEchhhChHHHHHHHHHHHHHHh
Confidence 577755222222233 78899999999999999999999988754
No 16
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=63.57 E-value=4.5 Score=36.75 Aligned_cols=29 Identities=24% Similarity=0.466 Sum_probs=27.1
Q ss_pred EEEeccchhhccchhhHHHHHHHHHHHhc
Q 043811 155 VAIGLNFRHIVADGAASVGFIQNWAKLHS 183 (448)
Q Consensus 155 ~~l~~~~~H~v~Dg~g~~~fl~~wA~~~r 183 (448)
+-|++++||.++||.-...|++.+.+.+.
T Consensus 204 m~lsls~DHRviDGa~aa~Fl~~lk~~le 232 (239)
T 3b8k_A 204 MSVTLSCDHRVVDGAVGAQWLAEFRKYLE 232 (239)
T ss_dssp EEEEECCCCCSSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHh
Confidence 78999999999999999999999998765
No 17
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=63.05 E-value=4.8 Score=36.39 Aligned_cols=30 Identities=30% Similarity=0.562 Sum_probs=27.4
Q ss_pred EEEeccchhhccchhhHHHHHHHHHHHhcC
Q 043811 155 VAIGLNFRHIVADGAASVGFIQNWAKLHSS 184 (448)
Q Consensus 155 ~~l~~~~~H~v~Dg~g~~~fl~~wA~~~rg 184 (448)
+-|+++++|.+.||.-...|++.+.+.+..
T Consensus 196 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 225 (233)
T 1scz_A 196 MYLALSYDHRLIDGRESVGFLVTIKELLED 225 (233)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHhC
Confidence 669999999999999999999999988764
No 18
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=62.97 E-value=4.8 Score=36.66 Aligned_cols=30 Identities=23% Similarity=0.444 Sum_probs=27.3
Q ss_pred EEEeccchhhccchhhHHHHHHHHHHHhcC
Q 043811 155 VAIGLNFRHIVADGAASVGFIQNWAKLHSS 184 (448)
Q Consensus 155 ~~l~~~~~H~v~Dg~g~~~fl~~wA~~~rg 184 (448)
+-|+++++|.+.||.-...|++.+.+.+..
T Consensus 208 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 237 (243)
T 1dpb_A 208 LPLSLSYDCRVINGAAAARFTKRLGDLLAD 237 (243)
T ss_dssp EEEEEEEETTTSCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEECcccccHHHHHHHHHHHHHHHhC
Confidence 679999999999999999999999987753
No 19
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=62.84 E-value=4.2 Score=36.57 Aligned_cols=31 Identities=26% Similarity=0.413 Sum_probs=28.0
Q ss_pred EEEeccchhhccchhhHHHHHHHHHHHhcCC
Q 043811 155 VAIGLNFRHIVADGAASVGFIQNWAKLHSSD 185 (448)
Q Consensus 155 ~~l~~~~~H~v~Dg~g~~~fl~~wA~~~rg~ 185 (448)
+-|+++++|.+.||.-...|++.+.+.....
T Consensus 187 m~lsls~DHRviDGa~aa~Fl~~l~~~le~p 217 (224)
T 3rqc_A 187 MYLSLSCDHRLIDGAVATRFIVDLKKVIEDP 217 (224)
T ss_dssp CCEEEEEETTTSCHHHHHHHHHHHHHHHTCT
T ss_pred EEEEEEeccceecHHHHHHHHHHHHHHHhCH
Confidence 5589999999999999999999999988753
No 20
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=61.34 E-value=5.3 Score=36.82 Aligned_cols=30 Identities=20% Similarity=0.397 Sum_probs=27.1
Q ss_pred EEEeccchhhccchhhHHHHHHHHHHHhcC
Q 043811 155 VAIGLNFRHIVADGAASVGFIQNWAKLHSS 184 (448)
Q Consensus 155 ~~l~~~~~H~v~Dg~g~~~fl~~wA~~~rg 184 (448)
+-|+++++|.+.||.-...|++.+.+.+..
T Consensus 224 m~lsls~DHRviDGa~aa~Fl~~lk~~Le~ 253 (262)
T 2ii3_A 224 MNVSWSADHRIIDGATVSRFSNLWKSYLEN 253 (262)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEECcceecHHHHHHHHHHHHHHHhC
Confidence 569999999999999999999999987753
No 21
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=55.71 E-value=7.6 Score=35.62 Aligned_cols=31 Identities=23% Similarity=0.235 Sum_probs=28.0
Q ss_pred EEEeccchhhccchhhHHHHHHHHHHHhcCC
Q 043811 155 VAIGLNFRHIVADGAASVGFIQNWAKLHSSD 185 (448)
Q Consensus 155 ~~l~~~~~H~v~Dg~g~~~fl~~wA~~~rg~ 185 (448)
+-|+++++|.+.||.-...|++.+.+.....
T Consensus 210 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~P 240 (256)
T 3mae_A 210 VNLCLSIDHRILDGLLAGKFLQAIKANVEKI 240 (256)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEEccccccHHHHHHHHHHHHHHHhCh
Confidence 4599999999999999999999999988754
No 22
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=54.13 E-value=8.4 Score=35.20 Aligned_cols=30 Identities=30% Similarity=0.412 Sum_probs=27.4
Q ss_pred EEEeccchhhccchhhHHHHHHHHHHHhcC
Q 043811 155 VAIGLNFRHIVADGAASVGFIQNWAKLHSS 184 (448)
Q Consensus 155 ~~l~~~~~H~v~Dg~g~~~fl~~wA~~~rg 184 (448)
+-|+++++|.+.||.-...|++.+.+....
T Consensus 205 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 234 (250)
T 3l60_A 205 MTLTCVFDHRVVDGAQVAQFMCELRDLIES 234 (250)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEecccccCHHHHHHHHHHHHHHHhC
Confidence 468999999999999999999999998774
No 23
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=39.14 E-value=17 Score=19.63 Aligned_cols=19 Identities=32% Similarity=0.307 Sum_probs=15.6
Q ss_pred CCCCHhHHHHHHHHHHHHh
Q 043811 256 YRPTRFEAVSGLIWDALIA 274 (448)
Q Consensus 256 ~~~St~dal~A~iW~~~~r 274 (448)
+-+++.|-|+-++|+++..
T Consensus 6 svftsqdylsdhlwralna 24 (26)
T 2xl1_A 6 SVFTSQDYLSDHLWRALNA 24 (26)
T ss_pred ceeecHHHHHHHHHHHHhc
Confidence 4578899999999998753
No 24
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=34.97 E-value=8.1 Score=38.31 Aligned_cols=30 Identities=30% Similarity=0.489 Sum_probs=0.0
Q ss_pred EEEeccchhhccchhhHHHHHHHHHHHhcC
Q 043811 155 VAIGLNFRHIVADGAASVGFIQNWAKLHSS 184 (448)
Q Consensus 155 ~~l~~~~~H~v~Dg~g~~~fl~~wA~~~rg 184 (448)
+-|++++||.+.||.-...|++.+.+.+..
T Consensus 391 m~lsls~DHRviDG~~aa~Fl~~lk~~Le~ 420 (428)
T 3dva_I 391 LALSLSFDHRMIDGATAQKALNHIKRLLSD 420 (428)
T ss_dssp ------------------------------
T ss_pred EEEEEEecccccchHHHHHHHHHHHHHHhC
Confidence 359999999999999999999999987664
No 25
>1x93_A Hypothetical protein HP0222; JHP0208, transcription, regula METJ, MNT, PArg, COPG, REPA; NMR {Helicobacter pylori} SCOP: a.43.1.3
Probab=32.59 E-value=82 Score=20.56 Aligned_cols=22 Identities=9% Similarity=0.067 Sum_probs=19.1
Q ss_pred eEEEEEecHHHHHHHHHHhhhc
Q 043811 226 VTKRFVFDGGKVAALRGEIIKK 247 (448)
Q Consensus 226 ~~~~f~fs~~~l~~Lk~~a~~~ 247 (448)
+...|+||.++-+.|++.|.++
T Consensus 2 ~~Vs~Y~SkEey~~L~klA~eE 23 (55)
T 1x93_A 2 RAVSLYFSDEQYQKLEKMANEE 23 (55)
T ss_dssp EEEEEEECHHHHHHHHHHHHHT
T ss_pred ceEEEEecHHHHHHHHHHHHHH
Confidence 3567999999999999999865
No 26
>2k1o_A Putative; repressor, transcriptional regulator, D binding, ribbon-helix-helix, HP0564, JHP0511, unknown funct regulation; NMR {Helicobacter pylori}
Probab=23.17 E-value=1.4e+02 Score=20.19 Aligned_cols=43 Identities=12% Similarity=0.069 Sum_probs=31.4
Q ss_pred CCeeEEEEEecHHHHHHHHHHhhhcccccCCCCCCCCHhHHHHHHHHHHHHhhhcC
Q 043811 223 PECVTKRFVFDGGKVAALRGEIIKKDASLSLNQYRPTRFEAVSGLIWDALIAMDRE 278 (448)
Q Consensus 223 ~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~~~~~~~St~dal~A~iW~~~~rar~~ 278 (448)
++.....|+||.++-+.|++.|.++. |.+..+|=|.+.++...
T Consensus 13 k~~~~Vs~Y~SkEey~~L~klA~eE~-------------eSV~sfIKR~IlK~l~y 55 (66)
T 2k1o_A 13 KRNFSVTFYLSKEEHDVLRRLADEEV-------------ESVNSFVKRHILKTIIY 55 (66)
T ss_dssp CCCEEEEEEEEHHHHHHHHHHHHTTC-------------SCHHHHHHHHHHHHHCS
T ss_pred ccceEEEEEecHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHH
Confidence 45566789999999999999998642 23456677777776544
Done!