Query 043813
Match_columns 110
No_of_seqs 120 out of 771
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 14:41:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043813.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043813hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ljo_A Non-specific lipid-tran 99.9 2.5E-26 8.5E-31 151.5 -3.0 77 32-110 1-92 (93)
2 1afh_A Maize nonspecific lipid 99.9 3E-25 1E-29 146.0 -2.0 77 32-110 1-93 (93)
3 1siy_A LTP 1, NS-LTP1, nonspec 99.9 5.5E-25 1.9E-29 144.2 -1.7 76 33-110 1-91 (91)
4 1bwo_A NS-LTP1, nonspecific li 99.9 4.3E-25 1.5E-29 144.6 -2.5 75 33-109 1-90 (90)
5 1t12_A LTP 1, nonspecific lipi 99.9 5.7E-25 2E-29 144.3 -2.0 76 32-110 1-91 (91)
6 2alg_A Non-specific lipid tran 99.9 3.7E-25 1.3E-29 145.3 -3.0 77 32-110 1-92 (92)
7 2rkn_A DIR1 protein, AT5G48485 99.4 1.2E-15 4.1E-20 96.7 -3.4 65 32-99 2-76 (77)
8 1n89_A Lipid transfer protein; 99.4 2E-14 6.9E-19 89.0 -2.4 55 40-97 5-65 (67)
9 1l6h_A LTP2, non-specific lipi 99.3 3E-14 1E-18 88.7 -2.2 59 34-97 2-66 (69)
10 1hyp_A Hydrophobic protein fro 71.1 0.61 2.1E-05 29.3 -0.6 61 33-107 6-78 (80)
11 1pnb_B Napin BNIB; napin IA an 34.4 13 0.00046 22.3 0.9 41 57-97 12-67 (75)
12 2lvf_A 2S albumin; allergen, c 29.9 9.6 0.00033 24.9 -0.3 55 41-95 17-101 (114)
13 3ob4_A Conglutin, maltose ABC 28.2 18 0.0006 28.4 0.9 45 57-102 429-492 (500)
14 2ds2_B Sweet protein mabinlin- 25.3 19 0.00066 21.6 0.5 15 82-96 49-63 (72)
15 1b1u_A Protein (alpha-amylase/ 20.5 44 0.0015 22.1 1.6 58 40-97 15-108 (122)
16 1hss_A 0.19 alpha-amylase inhi 20.1 19 0.00067 24.0 -0.3 58 40-97 15-104 (124)
No 1
>2ljo_A Non-specific lipid-transfer protein 2; lipid transport; NMR {Lens culinaris}
Probab=99.90 E-value=2.5e-26 Score=151.51 Aligned_cols=77 Identities=44% Similarity=1.017 Sum_probs=70.0
Q ss_pred ccCccccccCcccChHhhhcCCCCCcCCCCC---------------CccccccccccCCcccccChHHHhcccCcCCCCC
Q 043813 32 QVTCRTVVNDLTPCVSYVSYGGAVPTNCCNG---------------TVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNI 96 (110)
Q Consensus 32 ~~~C~~v~~~L~pC~~yl~~~~~Ps~~CC~~---------------~~ClClk~~~~~~~~~~in~~~a~~LP~~Cgv~~ 96 (110)
+++|+++...|.||++|++|++.|++.||++ ..|.|+|+.+..++ +||.+||.+||++|||++
T Consensus 1 AisC~~v~~~L~pCl~Yv~g~~~p~~~CC~gv~~l~~~a~t~~dr~~~C~clk~~a~~~~--~in~~~a~~LP~~CgV~~ 78 (93)
T 2ljo_A 1 AISCGAVTSDLSPCLTYLTGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSIT--KLNTNNAAALPGKCGVNI 78 (93)
T ss_dssp CCSSHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHGGGCT--TCCHHHHHHHHHHHTCCC
T ss_pred CCCHHHHHHHHHhHHHHHcCCCCCCCchhhHHHHHHHHhcCcccHHHHHHhHHhhhhccC--CcCHHHHHhhhHhcCCCC
Confidence 4789999999999999999887899999998 34777998877676 899999999999999999
Q ss_pred CCCCCCCCCCCCCC
Q 043813 97 PYQISPSTDCSRVQ 110 (110)
Q Consensus 97 p~~is~~~dC~~i~ 110 (110)
|||||+++||++|+
T Consensus 79 p~~Is~~~dC~~v~ 92 (93)
T 2ljo_A 79 PYKISTTTNCNTVK 92 (93)
T ss_dssp SSCCSTTCCGGGCC
T ss_pred CCCCCCCCCCCCCC
Confidence 99999999999996
No 2
>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A*
Probab=99.89 E-value=3e-25 Score=146.03 Aligned_cols=77 Identities=47% Similarity=1.012 Sum_probs=69.8
Q ss_pred ccCccccccCcccChHhhhcCC-CCCcCCCCC---------------CccccccccccCCcccccChHHHhcccCcCCCC
Q 043813 32 QVTCRTVVNDLTPCVSYVSYGG-AVPTNCCNG---------------TVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLN 95 (110)
Q Consensus 32 ~~~C~~v~~~L~pC~~yl~~~~-~Ps~~CC~~---------------~~ClClk~~~~~~~~~~in~~~a~~LP~~Cgv~ 95 (110)
+++|+++...|.||++|+++++ .|+++||++ ..|+|++.....++ +||.++|++||++||++
T Consensus 1 a~~C~~v~~~L~pCl~y~~~~~~~Ps~~CC~gv~~l~~~a~t~~dr~~~ClC~~~~~~~~~--~in~~~A~~LP~~C~v~ 78 (93)
T 1afh_A 1 AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVS--GLNAGNAASIPSKCGVS 78 (93)
T ss_dssp CCSSHHHHHHHGGGHHHHTTSCCSCCHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHTTST--TCCHHHHHHHHHHHHCC
T ss_pred CCChHHHHHhccCcHHHHcCCCCCChHHHHHHHHHHHHhhcCCCCCcccCEeecccccccc--CcCHHHHHHHHHHcCCC
Confidence 3689999999999999999877 688899999 26999987777776 79999999999999999
Q ss_pred CCCCCCCCCCCCCCC
Q 043813 96 IPYQISPSTDCSRVQ 110 (110)
Q Consensus 96 ~p~~is~~~dC~~i~ 110 (110)
+|||||+++||++|+
T Consensus 79 ~p~~is~~~dC~~v~ 93 (93)
T 1afh_A 79 IPYTISTSTDCSRVN 93 (93)
T ss_dssp CSSCCSTTCCSSSCC
T ss_pred CCCCCCCCCCCccCC
Confidence 999999999999986
No 3
>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var}
Probab=99.88 E-value=5.5e-25 Score=144.24 Aligned_cols=76 Identities=45% Similarity=1.020 Sum_probs=69.2
Q ss_pred cCccccccCcccChHhhhcCCCCCcCCCCC---------------CccccccccccCCcccccChHHHhcccCcCCCCCC
Q 043813 33 VTCRTVVNDLTPCVSYVSYGGAVPTNCCNG---------------TVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIP 97 (110)
Q Consensus 33 ~~C~~v~~~L~pC~~yl~~~~~Ps~~CC~~---------------~~ClClk~~~~~~~~~~in~~~a~~LP~~Cgv~~p 97 (110)
++|+++...|.||++|+++++.|+++||++ ..|+|+|+.+..++ +||.++|++||++||+++|
T Consensus 1 i~C~~v~~~L~pCl~yv~~~~~Ps~~CC~~lk~l~~~a~t~~d~~~~ClC~k~~~~~~~--~in~~~A~~LP~~Cgv~~p 78 (91)
T 1siy_A 1 MTCGQVQGNLAQCIGFLQKGGVVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVR--GINPNNAEALPGKCGVNIP 78 (91)
T ss_dssp CCTTTTHHHHHHHHHHHTSCSCCCHHHHHHHHHHHTTTCSSHHHHHHHHHHHHHTTCCS--SCCHHHHHHHHHHHTCCCS
T ss_pred CCHHHHHHhccCcHHHHhCCCCCcHHHHHHHHHHHhhhccCCCCCcCCcccCCcccccC--CcCHHHHHHHHHHcCCCCC
Confidence 479999999999999999877799999999 26999988777776 7999999999999999999
Q ss_pred CCCCCCCCCCCCC
Q 043813 98 YQISPSTDCSRVQ 110 (110)
Q Consensus 98 ~~is~~~dC~~i~ 110 (110)
|+||+++||++|+
T Consensus 79 ~~is~~~dC~~v~ 91 (91)
T 1siy_A 79 YKISTSTNCNSIN 91 (91)
T ss_dssp SCSCTTSCSSTTC
T ss_pred CCCCCCCCCccCC
Confidence 9999999999986
No 4
>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A*
Probab=99.88 E-value=4.3e-25 Score=144.56 Aligned_cols=75 Identities=43% Similarity=0.894 Sum_probs=68.7
Q ss_pred cCccccccCcccChHhhhcCCCCCcCCCCC---------------CccccccccccCCcccccChHHHhcccCcCCCCCC
Q 043813 33 VTCRTVVNDLTPCVSYVSYGGAVPTNCCNG---------------TVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIP 97 (110)
Q Consensus 33 ~~C~~v~~~L~pC~~yl~~~~~Ps~~CC~~---------------~~ClClk~~~~~~~~~~in~~~a~~LP~~Cgv~~p 97 (110)
++|+++...|.||++|+++++.|+++||++ ..|+|+|+.+..++ +||.++|++||++||+++|
T Consensus 1 i~C~~v~~~L~pCl~y~~~~~~Ps~~CC~~lk~l~~~a~t~~dr~~~ClClk~~~~~~~--~in~~~A~~LP~~C~v~~p 78 (90)
T 1bwo_A 1 IDCGHVDSLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIH--NLNEDNARSIPPKCGVNLP 78 (90)
T ss_dssp CCHHHHHHHHGGGHHHHTTCSCCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHTTCT--TCCHHHHHTHHHHHTCCCS
T ss_pred CCHHHHHHhhcccHHHHcCCCCCCHHHhHHHHHHHhhccCCCCCCccCcCccCchhccC--CcCHHHHHHHHHHcCCCCC
Confidence 479999999999999999877799999999 27999988877776 7999999999999999999
Q ss_pred CCCCCCCCCCCC
Q 043813 98 YQISPSTDCSRV 109 (110)
Q Consensus 98 ~~is~~~dC~~i 109 (110)
||||+++||++|
T Consensus 79 ~~is~~~dC~~v 90 (90)
T 1bwo_A 79 YTISLNIDCSRV 90 (90)
T ss_dssp SCCCTTCCGGGC
T ss_pred CCCCCCCCCCCC
Confidence 999999999987
No 5
>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum}
Probab=99.88 E-value=5.7e-25 Score=144.28 Aligned_cols=76 Identities=55% Similarity=1.124 Sum_probs=68.5
Q ss_pred ccCccccccCcccChHhhhcCCCCCcCCCCC---------------CccccccccccCCcccccChHHHhcccCcCCCCC
Q 043813 32 QVTCRTVVNDLTPCVSYVSYGGAVPTNCCNG---------------TVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNI 96 (110)
Q Consensus 32 ~~~C~~v~~~L~pC~~yl~~~~~Ps~~CC~~---------------~~ClClk~~~~~~~~~~in~~~a~~LP~~Cgv~~ 96 (110)
+++|+++...|.||++|+++++.|+ +||++ ..|+|+|+.+..++ +||.++|++||++||+++
T Consensus 1 a~~C~~v~~~L~pCl~y~~~~~~P~-~CC~gv~~l~~~a~t~~dr~~~ClClk~~~~~~~--~in~~~A~~LP~~C~v~~ 77 (91)
T 1t12_A 1 AITCGQVTSNLAPCLAYLRNTGPLG-RCCGGVKALVNSARTTEDRQIACTCLKSAAGAIS--GINLGKAAGLPSTCGVNI 77 (91)
T ss_dssp CCCHHHHHHHTHHHHHHHTTSSCCT-THHHHHHHHHHTTCSTHHHHHHHHHHHHHHHHCT--TCCHHHHHHHHHHTTCCC
T ss_pred CCChHHHHHhccCcHHHHcCCCChH-HHHHHHHHHHhhccCCCCCCccCCCccccccccC--CcChhHHHHHHHHcCCCC
Confidence 3689999999999999999866677 99999 38999987766776 799999999999999999
Q ss_pred CCCCCCCCCCCCCC
Q 043813 97 PYQISPSTDCSRVQ 110 (110)
Q Consensus 97 p~~is~~~dC~~i~ 110 (110)
|||||+++||++|+
T Consensus 78 p~~is~~~dC~~v~ 91 (91)
T 1t12_A 78 PYKISPSTDCSKVQ 91 (91)
T ss_dssp SSCSSSSSCCTTCC
T ss_pred CCCCCCCCCCccCC
Confidence 99999999999986
No 6
>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A*
Probab=99.88 E-value=3.7e-25 Score=145.33 Aligned_cols=77 Identities=51% Similarity=1.049 Sum_probs=69.8
Q ss_pred ccCccccccCcccChHhhhcCCCCCcCCCCC---------------CccccccccccCCcccccChHHHhcccCcCCCCC
Q 043813 32 QVTCRTVVNDLTPCVSYVSYGGAVPTNCCNG---------------TVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNI 96 (110)
Q Consensus 32 ~~~C~~v~~~L~pC~~yl~~~~~Ps~~CC~~---------------~~ClClk~~~~~~~~~~in~~~a~~LP~~Cgv~~ 96 (110)
+++|+++...|.||++|++++++|+++||++ ..|+|+++....++ +||.++|++||++||+++
T Consensus 1 ~~~C~~v~~~L~pCl~y~~~~~~p~~~CC~~lk~l~~~a~t~~d~~~~ClC~~~~~~~~~--~in~~~A~~LP~~Cgv~~ 78 (92)
T 2alg_A 1 MITCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVP--GVNPNNAAALPGKCGVSI 78 (92)
T ss_dssp CCCHHHHHHHHGGGHHHHHHCSCCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHST--TCCHHHHHHHHHHTTCCC
T ss_pred CCChHHHHHhccCcHHHHcCCCCCCHHHHHHHHHHHhhhcccCCCCcCCccccCcccccC--ccChHHHHHHHHHcCCCC
Confidence 3679999999999999999887888999999 36999887766776 799999999999999999
Q ss_pred CCCCCCCCCCCCCC
Q 043813 97 PYQISPSTDCSRVQ 110 (110)
Q Consensus 97 p~~is~~~dC~~i~ 110 (110)
||+||+++||++|+
T Consensus 79 p~~is~~~dC~~v~ 92 (92)
T 2alg_A 79 PYKISASTNCATVK 92 (92)
T ss_dssp SSCSSTTSCGGGCC
T ss_pred CCCCCCCCCCccCC
Confidence 99999999999986
No 7
>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana}
Probab=99.45 E-value=1.2e-15 Score=96.67 Aligned_cols=65 Identities=25% Similarity=0.475 Sum_probs=54.4
Q ss_pred ccCccccccCcccChHhhhcC--CCCCcCCCCC-----Ccccccccc---ccCCcccccChHHHhcccCcCCCCCCCC
Q 043813 32 QVTCRTVVNDLTPCVSYVSYG--GAVPTNCCNG-----TVCTCLKQA---VSGISYTRYQLGLAAGLPGKCGLNIPYQ 99 (110)
Q Consensus 32 ~~~C~~v~~~L~pC~~yl~~~--~~Ps~~CC~~-----~~ClClk~~---~~~~~~~~in~~~a~~LP~~Cgv~~p~~ 99 (110)
..+|+++...|.||++|++++ ..|+++||++ ..|+|.+.. +.++ +||.++|++||++||+++||.
T Consensus 2 ~~~C~~~~~~L~pC~~yv~~~~~~~Ps~~CC~~lk~~~~~ClC~~~~~~~~~~~---gin~~~A~~LP~~Cgv~~p~~ 76 (77)
T 2rkn_A 2 IDLCGMSQDELNECKPAVSKENPTSPSQPCCTALQHADFACLCGYKNSPWLGSF---GVDPELASALPKQCGLANAPT 76 (77)
T ss_dssp CCBTTBCHHHHHHHGGGGBSSSCCCCCHHHHHHHTTCCHHHHHTTTTCHHHHHH---TBCHHHHHHHHHHTTCSCCCC
T ss_pred cchHHhHHHhHhhCHHHHcCCCCCCCCHHHHHHHHhcCcCCcCcccCCcchhhc---CcCHHHHHHHHHHcCCCCCCC
Confidence 467999999999999999984 3889999999 579996544 3334 699999999999999998863
No 8
>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A*
Probab=99.35 E-value=2e-14 Score=89.03 Aligned_cols=55 Identities=27% Similarity=0.564 Sum_probs=47.2
Q ss_pred cCcccChHhhhcCCCCCcCCCCC----Ccccc--ccccccCCcccccChHHHhcccCcCCCCCC
Q 043813 40 NDLTPCVSYVSYGGAVPTNCCNG----TVCTC--LKQAVSGISYTRYQLGLAAGLPGKCGLNIP 97 (110)
Q Consensus 40 ~~L~pC~~yl~~~~~Ps~~CC~~----~~ClC--lk~~~~~~~~~~in~~~a~~LP~~Cgv~~p 97 (110)
..|.||++|++++++||++||++ ..|+| +|+.... . +||.++|++||++||+++|
T Consensus 5 ~~L~pC~~~v~~~~~Ps~~CC~~lk~~~~ClC~~~k~~~~~-~--~in~~~A~~Lp~~Cgv~~P 65 (67)
T 1n89_A 5 SQLAVCASAILSGAKPSGECCGNLRAQQGCFCQYAKDPTYG-Q--YIRSPHARDTLTSCGLAVP 65 (67)
T ss_dssp STTHHHHHHHTTCCCCCHHHHHHHHHHSSHHHHGGGCSTTH-H--HHTCHHHHHHHHHHTSCCS
T ss_pred hhcccCHHHHcCCCCCCHHHHHhhCCCCCCCCccccCcccc-c--ccCHHHHHHHHHHcCCCCC
Confidence 47899999999888999999999 89999 6665432 2 6999999999999999876
No 9
>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1
Probab=99.34 E-value=3e-14 Score=88.73 Aligned_cols=59 Identities=25% Similarity=0.566 Sum_probs=49.2
Q ss_pred CccccccCcccChHhhhcCCCCCcCCCCC----Ccccc--ccccccCCcccccChHHHhcccCcCCCCCC
Q 043813 34 TCRTVVNDLTPCVSYVSYGGAVPTNCCNG----TVCTC--LKQAVSGISYTRYQLGLAAGLPGKCGLNIP 97 (110)
Q Consensus 34 ~C~~v~~~L~pC~~yl~~~~~Ps~~CC~~----~~ClC--lk~~~~~~~~~~in~~~a~~LP~~Cgv~~p 97 (110)
+|+. ..|.||++|++++++||++||++ ..|+| +|+.... . +||.++|++||++||+++|
T Consensus 2 ~C~~--~~L~pC~~~v~~~~~Ps~~CC~~lk~~~~ClC~~~k~~~~~-~--~in~~~A~~Lp~~Cgv~~P 66 (69)
T 1l6h_A 2 GCNA--GQLTVCTGAIAGGARPTAACCSSLRAQQGCFCQFAKDPRYG-R--YVNSPNARKAVSSCGIALP 66 (69)
T ss_dssp CSTT--TTHHHHHHHHTTCCSTTHHHHHHHHHHHHHHHHHTTCSSHH-H--HTTTTTGGGCCCCCSSCSC
T ss_pred CCCh--hhcccCHHHHcCCCCCCHHHHHhhCCCCCCCCccccCcccc-c--ccCHHHHHHHHHHcCCCCC
Confidence 4655 47899999999888899999999 78999 6665332 2 6999999999999999876
No 10
>1hyp_A Hydrophobic protein from soybean; hydrophobic SEED protein; 1.80A {Glycine max} SCOP: a.52.1.1
Probab=71.09 E-value=0.61 Score=29.27 Aligned_cols=61 Identities=25% Similarity=0.643 Sum_probs=40.2
Q ss_pred cCccccccCcccChHhhhcCCCCCcCCCCC---------Ccccc--ccccccCCcccccChHHHhc-ccCcCCCCCCCCC
Q 043813 33 VTCRTVVNDLTPCVSYVSYGGAVPTNCCNG---------TVCTC--LKQAVSGISYTRYQLGLAAG-LPGKCGLNIPYQI 100 (110)
Q Consensus 33 ~~C~~v~~~L~pC~~yl~~~~~Ps~~CC~~---------~~ClC--lk~~~~~~~~~~in~~~a~~-LP~~Cgv~~p~~i 100 (110)
.+|- +|.-|.+-+.|.-.|..+||.- ..|+| +| + +. + +|.+...+ |-..||...|
T Consensus 6 ~~CP----kLgvCanvL~g~~~~~~~CC~Ll~GL~dleAAvCLCtaik--~--Lg-i-lnlpv~L~llln~Cgk~~P--- 72 (80)
T 1hyp_A 6 PSCP----DLSICLNILGGSLGTVDDCCALIGGLGDIEAIVCLCIQLR--A--LG-I-LNLNRNLQLILNSCGRSYP--- 72 (80)
T ss_dssp CCSC----CCGGGGGGGGTCCTTHHHHHHHHHTSCHHHHHHHHHHHHH--H--HT-C-SCHHHHHHHHHHHTTCSSC---
T ss_pred CCCC----chhHHHHHhCcCCCCCCccchhhhCcchhhhhhhhhhhcc--c--cc-e-eecChhHHHHHHHhCCcCc---
Confidence 3566 5788988775322456789987 78999 55 1 21 1 35554444 5578999988
Q ss_pred CCCCCCC
Q 043813 101 SPSTDCS 107 (110)
Q Consensus 101 s~~~dC~ 107 (110)
+.+.|.
T Consensus 73 -~gF~C~ 78 (80)
T 1hyp_A 73 -SNATCP 78 (80)
T ss_dssp -CCCCCS
T ss_pred -CCCCCC
Confidence 677775
No 11
>1pnb_B Napin BNIB; napin IA and IB, albumin SEED protein, SEED storage protein; NMR {Brassica napus} SCOP: a.52.1.3
Probab=34.37 E-value=13 Score=22.33 Aligned_cols=41 Identities=34% Similarity=0.673 Sum_probs=25.3
Q ss_pred cCCCCC-----Ccccc--cccccc------CCcc--cccChHHHhcccCcCCCCCC
Q 043813 57 TNCCNG-----TVCTC--LKQAVS------GISY--TRYQLGLAAGLPGKCGLNIP 97 (110)
Q Consensus 57 ~~CC~~-----~~ClC--lk~~~~------~~~~--~~in~~~a~~LP~~Cgv~~p 97 (110)
..||+- ..|.| |+.... .+.. ..-...+|..||+.||+..+
T Consensus 12 qqCC~qL~~~~~~CrC~aL~~~~~~~~~qgq~~~~q~~~~~q~a~~LP~~Cnl~~~ 67 (75)
T 1pnb_B 12 EQCCNELYQEDQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQI 67 (75)
T ss_dssp HHHHHHHHTSCGGGSHHHHHHHHHHHHSGGGCSSCCHHHHHHHCCSCSCSSCCTTT
T ss_pred HHHHHHHHhCCcccccHHHHHHHHHHHHHcccchHHHHHHHHHHHhhHHhcCCCCC
Confidence 568888 77999 443321 1210 01125678999999999744
No 12
>2lvf_A 2S albumin; allergen, copper binding, hydrophobic interaction; NMR {Bertholletia excelsa}
Probab=29.90 E-value=9.6 Score=24.89 Aligned_cols=55 Identities=25% Similarity=0.599 Sum_probs=33.3
Q ss_pred CcccChHhhhc----CC---CCC-------cCCCCC-----Ccccc--cccccc-------CCcc--cccChHHHhcccC
Q 043813 41 DLTPCVSYVSY----GG---AVP-------TNCCNG-----TVCTC--LKQAVS-------GISY--TRYQLGLAAGLPG 90 (110)
Q Consensus 41 ~L~pC~~yl~~----~~---~Ps-------~~CC~~-----~~ClC--lk~~~~-------~~~~--~~in~~~a~~LP~ 90 (110)
.|..|..||.- ++ .+. ..||+. +.|.| |+..+. .+.. +.==..+|..||+
T Consensus 17 ~L~~Cq~yv~qq~~~~~~~~~~~~~~~~~l~~CC~qL~qv~~~CrC~aL~~~v~~~~qq~~~~~~~~~~~~~q~A~~LP~ 96 (114)
T 2lvf_A 17 MLSHCRMYMRQQMEESTYQTMPRRGMEPHMSECCEQLEGMDESCRCEGLRMMMRMMQQKEMQPRGEQMRRMMRLAENIPS 96 (114)
T ss_dssp HHHHHHHHHHHHHHTTTTCSCCSSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccCCccccccchHHHHHHHHHHHHHCCcCccCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhChH
Confidence 58899999962 21 111 128888 77999 543321 1110 0001458999999
Q ss_pred cCCCC
Q 043813 91 KCGLN 95 (110)
Q Consensus 91 ~Cgv~ 95 (110)
.||+.
T Consensus 97 ~C~i~ 101 (114)
T 2lvf_A 97 RCNLS 101 (114)
T ss_dssp HHCCC
T ss_pred hcCCC
Confidence 99997
No 13
>3ob4_A Conglutin, maltose ABC transporter periplasmic protein, ARAH; alpha-amylase inhibitors (AAI), lipid transfer (LT) and SEED (SS) protein family; HET: MLR; 2.71A {Escherichia coli}
Probab=28.16 E-value=18 Score=28.35 Aligned_cols=45 Identities=29% Similarity=0.698 Sum_probs=27.4
Q ss_pred cCCCCC----C---cccc--ccccccC--------CcccccChHHHhcccCcCCCCCC--CCCCC
Q 043813 57 TNCCNG----T---VCTC--LKQAVSG--------ISYTRYQLGLAAGLPGKCGLNIP--YQISP 102 (110)
Q Consensus 57 ~~CC~~----~---~ClC--lk~~~~~--------~~~~~in~~~a~~LP~~Cgv~~p--~~is~ 102 (110)
.+||+. . .|+| |+..... ...-.+ ..+|+.||..||+..| .+|+.
T Consensus 429 ~~cc~~l~~~~~~~~c~c~~~~~~~~~~~~~~~~~~~~~~~-~~~a~~~p~~c~~~~~~~c~~~~ 492 (500)
T 3ob4_A 429 ERCCNELNEFENNQRCMCEALQQIMENQSDRLQGRQQEQQF-KRELRNLPQQCGLRAPQRCDLDV 492 (500)
T ss_dssp HHHHHHHGGGTTCHHHHHHHHHHHHHHHHTTCCSSHHHHHH-HHHHHTHHHHTTCCCCSCCCCC-
T ss_pred HHHHHHHHhCCcccccccHHHHHHHHHHHHHhhhHHHHHHH-HHHHhhCchhcCCCCCccCCccC
Confidence 569998 3 7999 5433211 000012 3459999999999866 45554
No 14
>2ds2_B Sweet protein mabinlin-2 chain B; plant protein, SEED storage protein; 1.70A {Capparis masaikai}
Probab=25.33 E-value=19 Score=21.56 Aligned_cols=15 Identities=27% Similarity=0.534 Sum_probs=12.8
Q ss_pred hHHHhcccCcCCCCC
Q 043813 82 LGLAAGLPGKCGLNI 96 (110)
Q Consensus 82 ~~~a~~LP~~Cgv~~ 96 (110)
..+|..||..||+..
T Consensus 49 ~q~a~~LP~~C~l~~ 63 (72)
T 2ds2_B 49 FDAARNLPNICNIPN 63 (72)
T ss_dssp HHHHHHHHHHTTCTT
T ss_pred HHHHHhhHHhcCCCC
Confidence 567899999999963
No 15
>1b1u_A Protein (alpha-amylase/trypsin inhibitor RATI); bifunctional, hydrolase inhibitor; 2.20A {Eleusine coracana} SCOP: a.52.1.2 PDB: 1bip_A 1tmq_B
Probab=20.52 E-value=44 Score=22.10 Aligned_cols=58 Identities=26% Similarity=0.508 Sum_probs=34.9
Q ss_pred cCcccChHhhhcC-----C-CCC----cCCCCC-----Ccccc--ccccc---------------cCCcc--cccChHHH
Q 043813 40 NDLTPCVSYVSYG-----G-AVP----TNCCNG-----TVCTC--LKQAV---------------SGISY--TRYQLGLA 85 (110)
Q Consensus 40 ~~L~pC~~yl~~~-----~-~Ps----~~CC~~-----~~ClC--lk~~~---------------~~~~~--~~in~~~a 85 (110)
..|.+|-.|+... . .|. ..||+. ..|+| |.... ..+++ -..-...|
T Consensus 15 ~~L~~Cr~Yv~~q~C~~g~~~p~~~~~~~CC~QL~~i~~~CRC~ALr~m~~~~~~~~g~~~g~~~~~~pgC~re~~~~~A 94 (122)
T 1b1u_A 15 NPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAIPAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFA 94 (122)
T ss_dssp STTTHHHHHHHHHHHCCCCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHTCEECTTSCEECCCCCCCTTCCHHHHHHHG
T ss_pred ccchHHHHHHHHhcccCCCCCchHHHHHHHHHHHHhCCccccHHHHHHHHHhhhhhhcccccccchhccCCcHHHHHHHH
Confidence 3578899999532 2 342 459999 77999 32211 11110 00112468
Q ss_pred hcc--cCcCCCCCC
Q 043813 86 AGL--PGKCGLNIP 97 (110)
Q Consensus 86 ~~L--P~~Cgv~~p 97 (110)
+.| |+.||++++
T Consensus 95 ~~Lv~P~~Cnl~~~ 108 (122)
T 1b1u_A 95 PKLVTEVECNLATI 108 (122)
T ss_dssp GGTTSTTTTCCCCT
T ss_pred HhcCCcccCCCCCC
Confidence 899 999999866
No 16
>1hss_A 0.19 alpha-amylase inhibitor; cereal inhibitor, animal amylase; 2.06A {Triticum aestivum} SCOP: a.52.1.2
Probab=20.15 E-value=19 Score=24.00 Aligned_cols=58 Identities=22% Similarity=0.453 Sum_probs=35.2
Q ss_pred cCcccChHhhhc---CC-CC---CcCCCCC-----Ccccc--ccccc----------------cCCcc--cccChHHHhc
Q 043813 40 NDLTPCVSYVSY---GG-AV---PTNCCNG-----TVCTC--LKQAV----------------SGISY--TRYQLGLAAG 87 (110)
Q Consensus 40 ~~L~pC~~yl~~---~~-~P---s~~CC~~-----~~ClC--lk~~~----------------~~~~~--~~in~~~a~~ 87 (110)
..|..|..|+.. +. .| ...||+. ..|+| |.... ..+++ =..-...|..
T Consensus 15 ~pL~~Cr~Yv~~~C~g~~~p~~~~~~CC~QL~~i~~~CRC~ALr~m~~~~~~~~g~~~g~~~~e~~pgCrre~~~~~A~~ 94 (124)
T 1hss_A 15 PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEHGAQEGQAGTGAFPRCRREVVKLTAAS 94 (124)
T ss_dssp SCCTTHHHHHHHHTTTCCCCHHHHHHHHHHHHTSCTTTHHHHHHHHHHHHHHHC---------CCSTTCCHHHHHHHHTT
T ss_pred CcchHHHHHHHHHccCCCCcHHHHHHHHHHHHhcCcccchHHHHHHHHhhhhhhhhhccccchhhccCCcHHHHHHHHHh
Confidence 357789999963 12 23 2469998 78999 32211 11110 0122236899
Q ss_pred ccCcCCCCCC
Q 043813 88 LPGKCGLNIP 97 (110)
Q Consensus 88 LP~~Cgv~~p 97 (110)
||+.||+.++
T Consensus 95 LP~~Cnl~~~ 104 (124)
T 1hss_A 95 ITAVCRLPIV 104 (124)
T ss_dssp HHHHTTCCEE
T ss_pred chhhcCCCCC
Confidence 9999999876
Done!