Query 043814
Match_columns 524
No_of_seqs 263 out of 2166
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 14:42:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043814.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043814hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vte_A Tetrahydrocannabinolic 100.0 1.2E-88 4.1E-93 726.8 51.3 501 13-517 3-515 (518)
2 3fw9_A Reticuline oxidase; BI- 100.0 3E-86 1E-90 706.7 50.3 487 16-515 1-494 (495)
3 3tsh_A Pollen allergen PHL P 4 100.0 5E-81 1.7E-85 672.1 46.8 491 12-518 6-499 (500)
4 3rja_A Carbohydrate oxidase; p 100.0 2.7E-75 9.2E-80 621.1 42.3 456 16-516 2-473 (473)
5 3pop_A GILR oxidase; FAD bindi 100.0 8.7E-72 3E-76 596.6 40.2 449 32-514 10-501 (501)
6 2wdx_A Putative hexose oxidase 100.0 4.4E-69 1.5E-73 580.0 40.9 458 17-514 23-523 (523)
7 2ipi_A Aclacinomycin oxidoredu 100.0 1.7E-67 5.8E-72 567.8 44.2 463 12-515 16-520 (521)
8 1zr6_A Glucooligosaccharide ox 100.0 1.6E-67 5.4E-72 566.2 42.8 459 11-516 3-480 (503)
9 2y3s_A TAML; oxidoreductase; H 100.0 1.9E-67 6.7E-72 567.6 42.8 451 31-515 33-528 (530)
10 2bvf_A 6-hydroxy-D-nicotine ox 100.0 5.2E-65 1.8E-69 542.0 38.0 432 32-514 14-456 (459)
11 1w1o_A Cytokinin dehydrogenase 100.0 2.6E-40 9E-45 357.9 31.7 222 13-252 30-262 (534)
12 2exr_A Cytokinin dehydrogenase 100.0 3.9E-34 1.3E-38 308.2 35.9 199 53-258 52-261 (524)
13 3pm9_A Putative oxidoreductase 100.0 2.4E-34 8.1E-39 305.8 29.8 205 53-261 42-253 (476)
14 4bby_A Alkyldihydroxyacetoneph 100.0 8.6E-35 2.9E-39 321.4 21.6 239 14-259 161-408 (658)
15 4feh_A Oxidoreductase DPRE1; a 100.0 1.9E-32 6.5E-37 291.3 35.6 179 54-239 35-218 (481)
16 2uuu_A Alkyldihydroxyacetoneph 100.0 1.7E-32 5.7E-37 298.0 19.2 201 59-260 134-339 (584)
17 2vfr_A Xylitol oxidase, aldito 100.0 1.7E-31 5.9E-36 281.0 25.0 175 54-241 12-189 (422)
18 1wvf_A 4-cresol dehydrogenase 100.0 7.8E-31 2.7E-35 282.9 22.4 199 59-263 53-268 (520)
19 2i0k_A Oxidoreductase; MIX alp 100.0 9.1E-30 3.1E-34 276.1 17.6 200 32-241 10-227 (561)
20 1e8g_A Vanillyl-alcohol oxidas 100.0 6.3E-29 2.1E-33 269.9 23.8 200 59-263 67-300 (560)
21 3js8_A Cholesterol oxidase; ch 100.0 2.6E-29 8.9E-34 267.3 16.6 193 36-239 9-221 (540)
22 1f0x_A DLDH, D-lactate dehydro 100.0 8.7E-29 3E-33 267.1 14.3 197 59-260 42-297 (571)
23 3tx1_A UDP-N-acetylenolpyruvoy 99.9 5.7E-26 2E-30 228.7 12.6 165 59-237 51-217 (322)
24 3i99_A UDP-N-acetylenolpyruvoy 99.9 1.6E-24 5.3E-29 220.5 13.9 165 59-237 27-199 (357)
25 1hsk_A UDP-N-acetylenolpyruvoy 99.9 7E-25 2.4E-29 222.1 11.0 160 59-235 45-209 (326)
26 1uxy_A MURB, uridine diphospho 99.9 7.3E-23 2.5E-27 207.6 16.9 164 60-237 12-183 (340)
27 2gqt_A UDP-N-acetylenolpyruvyl 99.9 7.3E-22 2.5E-26 193.5 9.6 152 61-236 21-173 (268)
28 2yvs_A Glycolate oxidase subun 99.8 2.5E-19 8.6E-24 170.5 10.1 118 122-245 1-124 (219)
29 1ffv_C CUTM, flavoprotein of c 98.2 2.2E-06 7.4E-11 84.8 8.2 154 62-235 4-177 (287)
30 1n62_C Carbon monoxide dehydro 97.5 0.00014 4.6E-09 71.9 7.3 154 62-234 4-176 (288)
31 2w3s_A Xanthine dehydrogenase; 97.2 0.0003 1E-08 73.8 6.3 153 65-234 179-345 (462)
32 3nvz_B Xanthine dehydrogenase/ 96.1 0.0071 2.4E-07 59.9 6.4 157 62-233 9-189 (305)
33 1t3q_C Quinoline 2-oxidoreduct 93.6 0.085 2.9E-06 51.6 6.0 154 61-233 3-174 (288)
34 3hrd_C Nicotinate dehydrogenas 92.1 0.2 6.9E-06 49.1 6.3 76 63-144 3-82 (296)
35 1wvf_A 4-cresol dehydrogenase 88.0 0.63 2.2E-05 49.4 6.3 29 481-509 481-510 (520)
36 1rm6_B 4-hydroxybenzoyl-COA re 87.1 0.67 2.3E-05 46.0 5.5 77 62-145 5-84 (324)
37 4bby_A Alkyldihydroxyacetoneph 80.7 2.8 9.6E-05 45.7 7.5 28 480-507 625-653 (658)
38 3unc_A Xanthine dehydrogenase/ 71.9 3.9 0.00013 48.2 5.9 79 62-147 232-313 (1332)
39 1e8g_A Vanillyl-alcohol oxidas 59.0 11 0.00038 40.1 5.9 21 489-509 524-544 (560)
40 2i0k_A Oxidoreductase; MIX alp 51.9 6.4 0.00022 42.0 2.5 22 488-509 533-554 (561)
41 3js8_A Cholesterol oxidase; ch 49.5 17 0.00057 38.5 5.2 23 487-509 511-533 (540)
42 1rzw_A Protein AF2095(GR4); be 47.5 24 0.00083 29.4 4.9 37 61-97 47-84 (123)
43 3zyv_A AOH1; oxidoreductase, m 44.9 19 0.00066 42.5 5.3 80 64-148 241-321 (1335)
44 1wn2_A Peptidyl-tRNA hydrolase 44.7 35 0.0012 28.3 5.4 37 60-96 53-90 (121)
45 1xty_A PTH, peptidyl-tRNA hydr 44.5 35 0.0012 28.2 5.5 41 54-96 48-89 (120)
46 1f0x_A DLDH, D-lactate dehydro 43.0 9.6 0.00033 40.7 2.2 26 487-513 536-561 (571)
47 2zv3_A PTH, peptidyl-tRNA hydr 42.6 34 0.0012 28.1 5.0 37 60-96 47-84 (115)
48 1rlk_A Hypothetical protein TA 41.4 36 0.0012 28.0 5.0 38 60-97 49-87 (117)
49 2uuu_A Alkyldihydroxyacetoneph 37.7 42 0.0014 35.8 6.1 27 481-507 552-579 (584)
50 1q7s_A BIT1, protein CGI-147; 35.2 64 0.0022 26.4 5.6 37 60-96 49-86 (117)
51 2lnd_A De novo designed protei 32.7 49 0.0017 25.1 3.9 34 64-97 29-62 (112)
52 1yht_A DSPB; beta barrel, hydr 26.8 39 0.0013 33.7 3.4 28 70-97 92-121 (367)
53 2b0t_A NADP isocitrate dehydro 24.8 69 0.0023 33.7 4.7 130 72-214 308-455 (738)
54 2g2c_A Putative molybdenum cof 24.4 1.2E+02 0.0041 26.2 5.8 40 64-103 47-86 (167)
55 2crl_A Copper chaperone for su 23.9 2.1E+02 0.0073 21.8 6.8 34 122-155 49-82 (98)
56 2yl5_A Beta-N-acetylhexosamini 21.9 54 0.0018 33.6 3.4 28 70-97 92-121 (442)
57 1mkz_A Molybdenum cofactor bio 21.6 1.5E+02 0.0052 25.8 6.0 39 64-102 46-85 (172)
58 2kxh_B Peptide of FAR upstream 21.0 51 0.0017 20.1 1.7 19 486-504 10-28 (31)
59 2pjk_A 178AA long hypothetical 20.7 1.6E+02 0.0055 25.8 6.0 39 64-102 58-97 (178)
60 2yl6_A Beta-N-acetylhexosamini 20.4 52 0.0018 33.6 2.9 29 70-98 89-119 (434)
61 3rfq_A Pterin-4-alpha-carbinol 20.2 1.6E+02 0.0056 26.0 5.9 39 64-102 67-105 (185)
No 1
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=100.00 E-value=1.2e-88 Score=726.75 Aligned_cols=501 Identities=48% Similarity=0.931 Sum_probs=428.4
Q ss_pred ccccHHHHhhhcCCCCCCCc-eeecCCCCCchhHHhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHhCCCeEEE
Q 043814 13 VLDNFIKCLTINSEVYIPFS-NFYTPNNSSFLSVLESSAQNLRYLVPSMPKPEFIFTPLNESHVRAAVICSRDLRIHLRI 91 (524)
Q Consensus 13 ~~~~~~~~l~~~~~~~~~~~-~~~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~p~s~edv~~~v~~a~~~~~~v~~ 91 (524)
..++|.+||.+.+..+.+++ .|++|+|+.|++++.++.+|.||+......|.+|++|++++||+++|++|+++++||.+
T Consensus 3 ~~~~f~~c~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~v 82 (518)
T 3vte_A 3 PRENFLKCFSKHIPNNVANPKLVYTQHDQLYMSILNSTIQNLRFISDTTPKPLVIVTPSNNSHIQATILCSKKVGLQIRT 82 (518)
T ss_dssp HHHHHHHHHHHHCCC----CCCEECTTSTTHHHHHHHTCCBGGGCSSSSCCCSEEECCCSHHHHHHHHHHHHHHTCEEEE
T ss_pred hhHHHHHHHHhcCCccCCCCceEECCCCcchHHHHhhhhcccccccccCCCCCEEEEeCCHHHHHHHHHHHHHcCCcEEE
Confidence 45789999999876555554 56899999999998888999999998899999999999999999999999999999999
Q ss_pred EeCCcCCCCCccccCCCCCeEEEEcCCCCceEEeCCCCeEEEeCCCCHHHHHHHHHHhCCCceEecCCCCCccccccccC
Q 043814 92 RSGGHDYEGLSYVSQIETPFFLLDLAKLRSIEVDINDNTAWVQAGATIGELYYRIAEKSNTQGFTAGLCPSVGSGGHITG 171 (524)
Q Consensus 92 ~ggGh~~~g~~~~~~~~~~~vvIdl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~g 171 (524)
||||||+.+.+.... .++++|||++||+|++|+++++|+||+|+++++|+++|.++|+++.++.|.|++|||||+++|
T Consensus 83 rggGh~~~g~~~~~~--~~gvvIdl~~l~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgvgG~~~g 160 (518)
T 3vte_A 83 RSGGHDAEGMSYISQ--VPFVVVDLRNMHSIKIDVHSQTAWVEAGATLGEVYYWINEKNENLSFPGGYCPTVGVGGHFSG 160 (518)
T ss_dssp ESSCCCTTCTTTCCS--SSEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCTTEECCCCSCTTCBHHHHHHT
T ss_pred ECCCcCCCCCccCCC--CCeEEEECCCCceeEEeCCCCEEEEeCCccHHHHHHHHHHhCCCceecCCCCCCeeeeeeeCC
Confidence 999999988774322 248999999999999999999999999999999999999998788999999999999999999
Q ss_pred CCCCCCccccCCcccceeEEEEEccCCcEEeccCCCchhhhhhhccCCCcceEEEEEEEEEEecCceEEEEEEEecch-h
Q 043814 172 GGYGTMMRKYGLGADNVVDARIVDASGRILDREAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKTLE-Q 250 (524)
Q Consensus 172 gg~G~~~~~~G~~~d~v~~~~vv~~~G~v~~~~~~~~dlf~a~rg~~~g~~GIvt~~tlk~~p~~~~~~~~~~~~~~~-~ 250 (524)
||+|+++++||+++|+|++++||++||++++.+.+|+|||||+|||++|+|||||+++||++|+|+.+..|.+.+.++ +
T Consensus 161 Gg~G~~s~~~G~~~D~V~~~evV~adG~iv~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~p~p~~~~~~~~~~~~~~~ 240 (518)
T 3vte_A 161 GGYGALMRNYGLAADNIIDAHLVNVDGKVLDRKSMGEDLFWAIRGGGGENFGIIAAWKIKLVAVPSKSTIFSVKKNMEIH 240 (518)
T ss_dssp CCCCTTHHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCGGGTCEEEEEEEECEECCSCEEEEEEEECCCHH
T ss_pred CCCccccCCCCchhheEEEEEEEccCCeEEEeeccccchhhheecccCCCceEEEEEEEEEEeCCCeEEEEEEEecCCHH
Confidence 999999999999999999999999999999754568999999999855999999999999999999888888887654 6
Q ss_pred hHHHHHHHHHHHHhhccccceEEEEEEeecCC---CCCCceEEEEEEEEecCChHHHHHHHHhhCCcCCCCcCcccccCh
Q 043814 251 GATKILYKWQQVADKLDEDLFIRVIIQLANAG---PKGKKTVTTSYNALFLGDSERLLQVIHKRFPELGLTRNDCIETSW 327 (524)
Q Consensus 251 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~---~~g~~~~~v~~~~~~~G~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 327 (524)
++.+++.+||++++++|+++++.+.+...++. ..+...+.+.+.++|+|+.+++.+.|.+.++.+++...++.+++|
T Consensus 241 ~~~~~l~~~~~~~~~~p~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~w 320 (518)
T 3vte_A 241 GLVKLFNKWQNIAYKYDKDLVLMTHFITKNITDNHGKNKTTVHGYFSSIFHGGVDSLVDLMNKSFPELGIKKTDCKEFSW 320 (518)
T ss_dssp HHHHHHHHHHHHGGGSCTTEEEEEEEEEESCC-------CEEEEEEEEEEESCHHHHHHHHHHHCGGGCCCGGGEEEECH
T ss_pred HHHHHHHHHHHHHHcCCHhHeEEEEEcccCCCCCCCcCCCceEEEEEEEEeCCHHHHhhhhhhhhhhcCCCccceeecch
Confidence 67889999999999999999998887753211 111123467888999999999999998888888776677889999
Q ss_pred HHHHHHhhCCCCC-CC---chhhccccccCcccceeecccccCCCCHHHHHHHHHHHHcC--CccEEEEeecCCCCCCCC
Q 043814 328 IRSVLYFAGYPNN-TE---PEILLDVQSLGKNYFKAKLDFVQEPVPETVLEGLWKMVLEE--DIPIILWNPYGGIMSKIS 401 (524)
Q Consensus 328 ~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~f~~~s~~~~~~~~~~~i~~~~~~~~~~--~~~~i~~~~~GG~i~~v~ 401 (524)
+++..++.+++.+ .+ ++.+.++......|||.|++|+.+++++++|+.+++.+.+. +.+.++++++||++++++
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~v~~~~~GGa~~~v~ 400 (518)
T 3vte_A 321 IDTTIFYSGVVNFNTANFKKEILLDRSAGKKTAFSIKLDYVKKPIPETAMVKILEKLYEEDVGAGMYVLYPYGGIMEEIS 400 (518)
T ss_dssp HHHHHHTSSSCCC-----CGGGGGCTTCSCCBEEEEEEEEESSCCCHHHHHHHHHGGGGSCTTTEEEEEEECCGGGGTSC
T ss_pred hhhhhhhhcCCccCCccchhhhhccCCcCcccceeeechhcccCCCHHHHHHHHHHHHhCCCCCeEEEEeecCccccCCC
Confidence 9988887765543 33 45555554445567899999999899999999999988763 357899999999999999
Q ss_pred CCCCCcccccCceEEEEEEeEeCCCCcccchhHHHHHHHHHHhccccccCCCCcccccCCCcccC-CCCCCCcchhhhch
Q 043814 402 ESEIAFPHRKGNIFTIQYMNAWKDGDEKNGTKHIGWIRRLYDYMAPYVSMFPRAAYVNYRDLDLG-INKKFNTSYTEASA 480 (524)
Q Consensus 402 ~~~tAf~~R~~~~~~~~~~~~w~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~g~Y~Ny~d~~~~-~~~~~~~~~~~~~~ 480 (524)
.++|||+||+..+|.+++.+.|.++ +.++++.+|++++++.|.|+.+..+.|+|+||.|.+++ .+...+++++..+.
T Consensus 401 ~~~TAf~hR~~~~~~~~~~~~w~~~--~~~~~~~~w~~~~~~~~~p~~~~~~~g~YvNy~D~dl~~~~~~~~~~~~~~~~ 478 (518)
T 3vte_A 401 ESAIPFPHRAGIMYELWYTASWEKQ--EDNEKHINWVRSVYNFTTPYVSQNPRLAYLNYRDLDLGKTNHASPNNYTQARI 478 (518)
T ss_dssp TTSSSCCCCTTCCEEEEEEEEECCT--TTHHHHHHHHHHHHHHTGGGSCCTTCCCCTTSCCGGGCCCCTTSCCCHHHHHH
T ss_pred CCCCcccccCcceEEEEEEEecCCc--chhHHHHHHHHHHHHHhccccCCCCccccccCCCccccccccccccchhhhhh
Confidence 9999999998558999999999765 45678899999999999999765567999999999876 32223455666778
Q ss_pred hhhhhhcccHHHHHHHHhhcCCCCCCccCCCCCCCCC
Q 043814 481 WGTKYFKDNFNRLVRVKIKVDPDNIFRHEQSIPPVPL 517 (524)
Q Consensus 481 ~~~~y~g~n~~RL~~IK~kyDP~nvF~~~~~I~~~~~ 517 (524)
|++.|||+||+||++||+||||+|||+++|||||.+.
T Consensus 479 w~~~Yyg~N~~RL~~vK~~yDP~n~F~~~QsI~p~~~ 515 (518)
T 3vte_A 479 WGEKYFGKNFNRLVKVKTKVDPNNFFRNEQSIPPLPP 515 (518)
T ss_dssp HHHHHSSTHHHHHHHHHHHHCTTCCSCCTTCCCCCCT
T ss_pred HHHHHhHhHHHHHHHHHhhcCchhcccCCCCCCCCCC
Confidence 9999999999999999999999999999999998765
No 2
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=100.00 E-value=3e-86 Score=706.69 Aligned_cols=487 Identities=44% Similarity=0.797 Sum_probs=420.0
Q ss_pred cHHHHhhhcCCCCCCCceeecCCCCCchhHHhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 043814 16 NFIKCLTINSEVYIPFSNFYTPNNSSFLSVLESSAQNLRYLVPSMPKPEFIFTPLNESHVRAAVICSRDLRIHLRIRSGG 95 (524)
Q Consensus 16 ~~~~~l~~~~~~~~~~~~~~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~p~s~edv~~~v~~a~~~~~~v~~~ggG 95 (524)
+|.+||.+....+ ...|++|+|+.|++++.++.+|.||+....+.|.+|++|+|++||+++|++|+++++||++||||
T Consensus 1 ~~~~cl~~~~~~~--~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrGgG 78 (495)
T 3fw9_A 1 DLLSCLTFNGVRN--HTVFSADSDSDFNRFLHLSIQNPLFQNSLISKPSAIILPGSKEELSNTIRCIRKGSWTIRLRSGG 78 (495)
T ss_dssp CHHHHHHHTTCCC--EEECCCCTTCHHHHHHHHTCCCGGGCSTTSCCCSEEECCCSHHHHHHHHHHHHTSSCEEEEESSC
T ss_pred ChhHHHhhcCCCC--CCeEECCCCCchHHHHhhhhhhcccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEECCC
Confidence 4889999986422 36779999999999987789999999999999999999999999999999999999999999999
Q ss_pred cCCCCCccccCCCCCeEEEEcCCCCceEEeCCCCeEEEeCCCCHHHHHHHHHHhCCCceEecCCCCCccccccccCCCCC
Q 043814 96 HDYEGLSYVSQIETPFFLLDLAKLRSIEVDINDNTAWVQAGATIGELYYRIAEKSNTQGFTAGLCPSVGSGGHITGGGYG 175 (524)
Q Consensus 96 h~~~g~~~~~~~~~~~vvIdl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~ggg~G 175 (524)
||+.|.+...+ +++++|||++|++|++|+++++|+||+|+++++|+++|.++|+++.++.|.|+++||||+++|||+|
T Consensus 79 h~~~g~~~~~~--~ggvvIdl~~m~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgigG~~~gGg~G 156 (495)
T 3fw9_A 79 HSYEGLSYTSD--TPFILIDLMNLNRVSIDLESETAWVESGSTLGELYYAITESSSKLGFTAGWCPTVGTGGHISGGGFG 156 (495)
T ss_dssp CCTTCTTSCCS--SCEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCSSEECCCCSCTTCBHHHHHHTCCCC
T ss_pred cCCCCccccCC--CCeEEEECCCCCcEEEeCCCCEEEEcCCCCHHHHHHHHHHhcCCceeccCCCCCCeEeeeccCCCCc
Confidence 99988876543 3589999999999999999999999999999999999999976688999999999999999999999
Q ss_pred CCccccCCcccceeEEEEEccCCcEEeccCCCchhhhhhhccCCCcceEEEEEEEEEEecCceEEEEEEEecch-hhHHH
Q 043814 176 TMMRKYGLGADNVVDARIVDASGRILDREAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKTLE-QGATK 254 (524)
Q Consensus 176 ~~~~~~G~~~d~v~~~~vv~~~G~v~~~~~~~~dlf~a~rg~~~g~~GIvt~~tlk~~p~~~~~~~~~~~~~~~-~~~~~ 254 (524)
+++++||+++|+|++++||++||++++++.+++||||++|||++|+|||||+++||++|+|+.+..|.+.+..+ +++.+
T Consensus 157 ~~~~~~G~~~D~v~~~~vV~adG~i~~~~~~~~DLf~a~rGg~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~a~~ 236 (495)
T 3fw9_A 157 MMSRKYGLAADNVVDAILIDANGAILDRQAMGEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEATS 236 (495)
T ss_dssp TTHHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCTTSSCEEEEEEEECEECCSSEEEEEEEEEECHHHHHH
T ss_pred ccccCCCchhheEEEEEEEcCCCCEEEcCCCChhhhhhhhcccCCCcEEEEEEEEEEEeCCCeEEEEEEeecCcHHHHHH
Confidence 99999999999999999999999999855578999999999555999999999999999999888888887654 66788
Q ss_pred HHHHHHHHHhhccccceEEEEEEeecCCCCCCceEEEEEEEEecCChHHHHHHHHhhCCcCCCCcCcccccChHHHHHHh
Q 043814 255 ILYKWQQVADKLDEDLFIRVIIQLANAGPKGKKTVTTSYNALFLGDSERLLQVIHKRFPELGLTRNDCIETSWIRSVLYF 334 (524)
Q Consensus 255 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~G~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (524)
++..|+++++++|+++++.+..... .....+.+.++|+|+.+++.+.|.+.++.+++...++.+++|++...++
T Consensus 237 ~l~~~~~~~~~~~~~l~~~~~~~~~------~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~~~~~~~~~ 310 (495)
T 3fw9_A 237 LLHKWQFVAEELEEDFTLSVLGGAD------EKQVWLTMLGFHFGLKTVAKSTFDLLFPELGLVEEDYLEMSWGESFAYL 310 (495)
T ss_dssp HHHHHHHHHHHSCTTEEEEEEEEEE------TTEEEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHHHHH
T ss_pred HHHHHHHHHhcCChhHeEEEEEcCC------CCceEEEEEEEEeCCHHHHHHHHHHhhhhcCCCccceEEcCHHHHHHHH
Confidence 9999999999999999887764321 1234577889999999999999888788887766788999999988777
Q ss_pred hCCCCCCCchhhcccccc-CcccceeecccccCCCCHHHHHHHHHHHHcCCccEEEEeecCCCCCCCCCCCCCcccccCc
Q 043814 335 AGYPNNTEPEILLDVQSL-GKNYFKAKLDFVQEPVPETVLEGLWKMVLEEDIPIILWNPYGGIMSKISESEIAFPHRKGN 413 (524)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~-~~~~f~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~GG~i~~v~~~~tAf~~R~~~ 413 (524)
.+++. ++.+.++... .+.+||.|+.|+.+++++++++.+++.+.+.+.+.++++++||++++++.++|||+||++.
T Consensus 311 ~~~~~---~~~l~~~~~~~~~~~~~~ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~~~~~GGa~~~v~~~~TAf~hR~~~ 387 (495)
T 3fw9_A 311 AGLET---VSQLNNRFLKFDERAFKTKVDLTKEPLPSKAFYGLLERLSKEPNGFIALNGFGGQMSKISSDFTPFPHRSGT 387 (495)
T ss_dssp TTCSC---GGGGGCTTSCSCCCEEEEEEEECSSCCCHHHHHHHHHHHHHCTTEEEEEEECCGGGGTSCTTTSSCCCCTTC
T ss_pred hcccc---hhhhcCCCCCccCcceeEeehhhcCCCCHHHHHHHHHHHhhCCCcEEEecccCCccccCCCCCCCccccCcc
Confidence 54432 3334444322 3467899999999999999999999998877777899999999999999999999999855
Q ss_pred eEEEEEEeEeCCCCcccchhHHHHHHHHHHhccccccCCCCcccccCCCcccCCCCC-----CCcchhhhchhhhhhhcc
Q 043814 414 IFTIQYMNAWKDGDEKNGTKHIGWIRRLYDYMAPYVSMFPRAAYVNYRDLDLGINKK-----FNTSYTEASAWGTKYFKD 488 (524)
Q Consensus 414 ~~~~~~~~~w~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~g~Y~Ny~d~~~~~~~~-----~~~~~~~~~~~~~~y~g~ 488 (524)
+|.+++.+.|.++.++.++++.+|++++++.+.|+.+..++++|+||.|.+++.++. .++++...+.|++.|||+
T Consensus 388 ~~~~~~~~~w~~~~~~~~~~~~~w~~~~~~~~~p~~~~~~~~~Y~Ny~d~dl~~~~~~~~~~~~~~~~~~~~w~~~Yyg~ 467 (495)
T 3fw9_A 388 RLMVEYIVAWNQSEQKKKTEFLDWLEKVYEFMKPFVSKNPRLGYVNHIDLDLGGIDWGNKTVVNNAIEISRSWGESYFLS 467 (495)
T ss_dssp CEEEEEEEEECGGGGGGHHHHHHHHHHHHHHHGGGSCCSSCCCCGGGCCGGGCCCCTTCHHHHHTHHHHHHHHHHHHHGG
T ss_pred ceEEEEEEecCCCCcchhHHHHHHHHHHHHHHhhhccCCCcccccCccCccccccccccccccccccchhhhhHHHHhHh
Confidence 899999999975433456788999999999999997655678999999998763110 023445566899999999
Q ss_pred cHHHHHHHHhhcCCCCCCccCCCCCCC
Q 043814 489 NFNRLVRVKIKVDPDNIFRHEQSIPPV 515 (524)
Q Consensus 489 n~~RL~~IK~kyDP~nvF~~~~~I~~~ 515 (524)
||+||++||+||||+|||+++|+|||.
T Consensus 468 n~~RL~~vK~~yDP~n~F~~~qsI~p~ 494 (495)
T 3fw9_A 468 NYERLIRAKTLIDPNNVFNHPQSIPPM 494 (495)
T ss_dssp GHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred HHHHHHHHHHhhCcHhhCCCCCCCCCC
Confidence 999999999999999999999999984
No 3
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=100.00 E-value=5e-81 Score=672.11 Aligned_cols=491 Identities=44% Similarity=0.842 Sum_probs=410.4
Q ss_pred cccccHHHHhhhcCCCCCCCceeecCCCCCchhHHhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHhCCCeEEE
Q 043814 12 SVLDNFIKCLTINSEVYIPFSNFYTPNNSSFLSVLESSAQNLRYLVPSMPKPEFIFTPLNESHVRAAVICSRDLRIHLRI 91 (524)
Q Consensus 12 ~~~~~~~~~l~~~~~~~~~~~~~~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~p~s~edv~~~v~~a~~~~~~v~~ 91 (524)
+..++|.+||.+.+. ...|++|+++.|.+.+.++.+|.||+.....+|.+||+|++++||+++|++|+++++||++
T Consensus 6 ~~~~~f~~~L~~~~~----~~~v~~~~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~p~~~~~v~~~v~~a~~~~~~~~~ 81 (500)
T 3tsh_A 6 AAKEDFLGCLVKEIP----PRLLYAKSSPAYPSVLGQTIRNSRWSSPDNVKPLYIITPTQVSHIQSAVVCGRRHSVRIRV 81 (500)
T ss_dssp ---CHHHHHHHHHSC----GGGEEETTSTTHHHHHHTTCCCTTTTSTTSCCCSEEECCSSHHHHHHHHHHHHHTTCEEEE
T ss_pred ccHHHHHHHHHhhCC----CCEEECCCCCccHHHHHhhhccccccCCCCCCceEEEEcCCHHHHHHHHHHHHHCCCcEEE
Confidence 456789999999874 3567899999999999899999999999999999999999999999999999999999999
Q ss_pred EeCCcCCCCCccccCCCCCeEEEEcCCCCceEEeCCCCeEEEeCCCCHHHHHHHHHHhCCCceEecCCCCCccccccccC
Q 043814 92 RSGGHDYEGLSYVSQIETPFFLLDLAKLRSIEVDINDNTAWVQAGATIGELYYRIAEKSNTQGFTAGLCPSVGSGGHITG 171 (524)
Q Consensus 92 ~ggGh~~~g~~~~~~~~~~~vvIdl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~g 171 (524)
|||||++.|.+.+....+++++|||++||+|++|+++++|+||+|+++++|+++|.++|+.+.+++|.|++||+||+++|
T Consensus 82 r~gGh~~~g~s~~~~~~~~~~~idl~~~~~v~~d~~~~~~~v~~G~~~~~~~~~l~~~g~~~~~~~g~~~~vgvgG~~~~ 161 (500)
T 3tsh_A 82 RSGGHDYEGLSYRSLQPETFAVVDLNKMRAVWVDGKARTAWVDSGAQLGELYYAIYKASPTLAFPAGVCPTIGVGGNFAG 161 (500)
T ss_dssp ESSCCCTTCTTTCCSSSCCEEEEECTTCCCEEEETTTTEEEEETTSBHHHHHHHHHHHCTTEECCCCSSTTSBHHHHHHT
T ss_pred EcCCcCCCCCcCCCCCcCCeEEEECcCCCCEEECCCCCEEEEccCcCHHHHHHHHHHhCCCcccCCCCCCCceecCcccc
Confidence 99999998877543222469999999999999999999999999999999999999999888889999999999999999
Q ss_pred CCCCCCccccCCcccceeEEEEEccCCcEEeccCCCchhhhhhhccCCCcceEEEEEEEEEEecCceEEEEEEEecchhh
Q 043814 172 GGYGTMMRKYGLGADNVVDARIVDASGRILDREAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKTLEQG 251 (524)
Q Consensus 172 gg~G~~~~~~G~~~d~v~~~~vv~~~G~v~~~~~~~~dlf~a~rg~~~g~~GIvt~~tlk~~p~~~~~~~~~~~~~~~~~ 251 (524)
||+|.++++||+++|+|+++|||++||++++++.+++||||++|||++|+|||||++|||++|+|+.+..+...+...+.
T Consensus 162 gg~g~~~~~~G~~~d~v~~~~vV~a~G~i~~~~~~~~dl~~a~~gg~gg~fGvvt~~~~~~~p~p~~~~~~~~~~~~~~~ 241 (500)
T 3tsh_A 162 GGFGMLLRKYGIAAENVIDVKLVDANGKLHDKKSMGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTVSEG 241 (500)
T ss_dssp CCCCTTHHHHCCGGGGEEEEEEECTTSCEECHHHHCHHHHHHHTTSCSSTTCEEEEEEEECEECCSCEEEEEEEEETTTT
T ss_pred ccCCccccccCChhhheeeEEEECCCceEEECCCCChHHHHHHHhhcccceEEEEEEEEEEEeCCCeEEEEEEecCcHHH
Confidence 99999999999999999999999999999986677899999999888789999999999999999988888887776677
Q ss_pred HHHHHHHHHHHHhhccccceEEEEEEeecCCCCCCceEEEEEEEEecCChHHHHHHHHhhCCcCCCCcCcccccChHHHH
Q 043814 252 ATKILYKWQQVADKLDEDLFIRVIIQLANAGPKGKKTVTTSYNALFLGDSERLLQVIHKRFPELGLTRNDCIETSWIRSV 331 (524)
Q Consensus 252 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~G~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 331 (524)
+.+++..|+.+++.+|+++...+.... ....+..+|+|+.+++.+.+...++.++.....+..++|.+..
T Consensus 242 ~~~~~~~~~~~~~~~~~~l~~~~~~~~----------~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 311 (500)
T 3tsh_A 242 AVDIINKWQVVAPQLPADLMIRIIAQG----------PKATFEAMYLGTCKTLTPLMSSKFPELGMNPSHCNEMSWIQSI 311 (500)
T ss_dssp HHHHHHHHHHHGGGSCTTEEEEEEESS----------SEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHH
T ss_pred HHHHHHHHHHhhhccChhhEEEEEecC----------CCcEEEEEEecchhhhhhhhhhcchhccCCccccchhhhhccc
Confidence 788999999999999999877665431 1345678899999988888877777777766677778888866
Q ss_pred HHhhCCCCCCCchhhccccccCcccceeecccccCCCCHHHHHHHHHHHHcCC-ccEEEEeecCCCCCCCCCCCCCcccc
Q 043814 332 LYFAGYPNNTEPEILLDVQSLGKNYFKAKLDFVQEPVPETVLEGLWKMVLEED-IPIILWNPYGGIMSKISESEIAFPHR 410 (524)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~s~~~~~~~~~~~i~~~~~~~~~~~-~~~i~~~~~GG~i~~v~~~~tAf~~R 410 (524)
.+..........+...++......+.+.++.++.++++++.++.+++.+...+ ...+.++++||+++++++++|+|+||
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gga~~~~~~~ata~~~R 391 (500)
T 3tsh_A 312 PFVHLGHRDALEDDLLNRQNSFKPFAEYKSDYVYQPFPKTVWEQILNTWLVKPGAGIMIFDPYGATISATPESATPFPHR 391 (500)
T ss_dssp HHHHHCCSSCHHHHHHCCCCCCCCEEEEEEEEECSCCCHHHHHHHHHTGGGSTTCCEEEEEECCHHHHHSCTTSSSCCCC
T ss_pred hhhhhccccccccccccccccccchhhhhhhhhcccCcHHHHHHHHHHhhcCCCceEEEEcccCccccCCCCccCcCccc
Confidence 55432222211222333333334455667777877888888888877665544 46778899999999999999999999
Q ss_pred cCceEEEEEEeEeCCCCcccchhHHHHHHHHHHhccccccCCCCcccccCCCcccCCCCCC--Ccchhhhchhhhhhhcc
Q 043814 411 KGNIFTIQYMNAWKDGDEKNGTKHIGWIRRLYDYMAPYVSMFPRAAYVNYRDLDLGINKKF--NTSYTEASAWGTKYFKD 488 (524)
Q Consensus 411 ~~~~~~~~~~~~w~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~g~Y~Ny~d~~~~~~~~~--~~~~~~~~~~~~~y~g~ 488 (524)
+..++.+++...|.++. .+++..+|++++++.+.++.+..+.++|+||+|.+++.++.. ...+.....|++.|||+
T Consensus 392 ~~~l~~i~~~~~w~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~aY~Ny~D~dlg~~~~~~~~~~~~~~~~w~~~Y~g~ 469 (500)
T 3tsh_A 392 KGVLFNIQYVNYWFAPG--AAAAPLSWSKDIYNYMEPYVSKNPRQAYANYRDIDLGRNEVVNDVSTYASGKVWGQKYFKG 469 (500)
T ss_dssp TTCCEEEEEEEEECSTT--CCHHHHHHHHHHHHHHGGGSCCSSCCCCTTSCCGGGCCCCEETTEECHHHHHHHHHHHHGG
T ss_pred CCcEEEEEEEEecCCcc--hhHHHHHHHHHHHHHHHHHhcCCCCeEEeccccccccccccccccccccccchHHHHhhhH
Confidence 97778999999998774 457888999999999999876667799999999987642210 12334456899999999
Q ss_pred cHHHHHHHHhhcCCCCCCccCCCCCCCCCC
Q 043814 489 NFNRLVRVKIKVDPDNIFRHEQSIPPVPLK 518 (524)
Q Consensus 489 n~~RL~~IK~kyDP~nvF~~~~~I~~~~~~ 518 (524)
||+||++||+||||+|||+++|+|||..-|
T Consensus 470 Ny~RL~~IK~kyDP~nvF~~~qsI~Pl~~~ 499 (500)
T 3tsh_A 470 NFERLAITKGKVDPTDYFRNEQSIPPLIKK 499 (500)
T ss_dssp GHHHHHHHHHHHCTTCCSCCTTSCCCCCC-
T ss_pred HHHHHHHHHHHhCcccccCCCCCCCCCCCC
Confidence 999999999999999999999999997543
No 4
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=2.7e-75 Score=621.12 Aligned_cols=456 Identities=23% Similarity=0.437 Sum_probs=372.3
Q ss_pred cHHHHhhhcCCCCCCCceeecCCCCCchhHHhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHhCCCeEEEEeCC
Q 043814 16 NFIKCLTINSEVYIPFSNFYTPNNSSFLSVLESSAQNLRYLVPSMPKPEFIFTPLNESHVRAAVICSRDLRIHLRIRSGG 95 (524)
Q Consensus 16 ~~~~~l~~~~~~~~~~~~~~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~p~s~edv~~~v~~a~~~~~~v~~~ggG 95 (524)
+|.+||.++. ..+++|+|+.|+++++ +|+..+...|.+|++|+|++||+++|++|+++++||.+||||
T Consensus 2 ~l~~cl~~~~------~~v~~p~~~~y~~~~~------~~n~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggG 69 (473)
T 3rja_A 2 AIEACLSAAG------VPIDIPGTADYERDVE------PFNIRLPYIPTAIAQTQTTAHIQSAVQCAKKLNLKVSAKSGG 69 (473)
T ss_dssp HHHHHHHHTT------CCBCCTTSHHHHHHTC------CSBTTSCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSC
T ss_pred hHHHHHHhCC------CcEECCCCCchHHHHH------HhhcccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEcCC
Confidence 5899999973 3579999999998743 455555679999999999999999999999999999999999
Q ss_pred cCCCCCccccCCCCCeEEEEcCCCCceE-EeCCCCeEEEeCCCCHHHHHHHHHHhCCCceEecCCCCCccccccccCCCC
Q 043814 96 HDYEGLSYVSQIETPFFLLDLAKLRSIE-VDINDNTAWVQAGATIGELYYRIAEKSNTQGFTAGLCPSVGSGGHITGGGY 174 (524)
Q Consensus 96 h~~~g~~~~~~~~~~~vvIdl~~~~~i~-~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~ggg~ 174 (524)
||+.+.+.... +++++|||++||+|. +|+++.+|+||+|+++++|+++|.++| .+.++.|.|+++||||++++||+
T Consensus 70 h~~~g~~~~~~--~~~vvIdl~~~~~i~~vd~~~~~v~v~aG~~~~~l~~~l~~~G-~~~~p~G~~~~vgvgG~~~ggg~ 146 (473)
T 3rja_A 70 HSYASFGFGGE--NGHLMVQLDRMIDVISYNDKTGIAHVEPGARLGHLATVLNDKY-GRAISHGTCPGVGISGHFAHGGF 146 (473)
T ss_dssp CCTTCGGGTSS--SSCEEEECTTCCCEEEEETTTTEEEECTTCBHHHHHHHHHHHH-SEECCCCSCTTCBHHHHHHTCCC
T ss_pred CCCCCCcccCC--CCeEEEECCCCCceEEEcCCCCEEEECCCCCHHHHHHHHHHcC-CEEeccCCCCCcEeeeeccCCCC
Confidence 99986554322 358999999999997 999999999999999999999999998 36778899999999999999999
Q ss_pred CCCccccCCcccceeEEEEEccCCcEEe-ccCCCchhhhhhhccCCCcceEEEEEEEEEEecCceEEEEEEEecch--hh
Q 043814 175 GTMMRKYGLGADNVVDARIVDASGRILD-REAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKTLE--QG 251 (524)
Q Consensus 175 G~~~~~~G~~~d~v~~~~vv~~~G~v~~-~~~~~~dlf~a~rg~~~g~~GIvt~~tlk~~p~~~~~~~~~~~~~~~--~~ 251 (524)
|+.+++||+++|+|++++||++||++++ +..+++||||++|||+ |+|||||+++||++|+|+....|.+.+.+. ++
T Consensus 147 G~~~~~~G~~~D~v~~~~vV~a~G~v~~~~~~~~~dLf~a~rG~~-g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~ 225 (473)
T 3rja_A 147 GFSSHMHGLAVDSVVGVTVVLADGRIVEASATENADLFWGIKGAG-SNFGIVAVWKLATFPAPKVLTRFGVTLNWKNKTS 225 (473)
T ss_dssp CTTHHHHCCGGGGEEEEEEECTTSCEEEEETTBSHHHHHHHHHHG-GGTCEEEEEEEECEECCSCEEEEEEECCCCSHHH
T ss_pred CcccccccchHhheeeEEEEecCCeEEEeCCCCCcchhhcccCCC-CceEEEEEEEEEEEeCCCceEEEEEEecCccHHH
Confidence 9999999999999999999999999997 5667899999999997 999999999999999998888888877664 34
Q ss_pred HHHHHHHHHHHHh-hccccceEEEEEEeecCCCCCCceEEEEEEEEecCChHHHHHHHHhhCCcCC-CCcCccc-ccChH
Q 043814 252 ATKILYKWQQVAD-KLDEDLFIRVIIQLANAGPKGKKTVTTSYNALFLGDSERLLQVIHKRFPELG-LTRNDCI-ETSWI 328 (524)
Q Consensus 252 ~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~G~~~~~~~~l~~~~~~~~-~~~~~~~-~~~~~ 328 (524)
+.+++++|+++.. ++|+++++.+.+. . + + .+.+.++|+|+++++.+.+.+++...+ +...++. +++|.
T Consensus 226 ~~~~~~~~~~~~~~~~p~~l~~~~~~~-~-~---~----~~~~~~~~~G~~~~~~~~l~pl~~~~p~~~~~~~~~~~~~~ 296 (473)
T 3rja_A 226 ALKGIEAVEDYARWVAPREVNFRIGDY-G-A---G----NPGIEGLYYGTPEQWRAAFQPLLDTLPAGYVVNPTTSLNWI 296 (473)
T ss_dssp HHHHHHHHHHHHHHTCCTTEEEEEEES-S-S---S----CCEEEEEEESCHHHHHHHHHHHHTTSCTTCEECCCEEECHH
T ss_pred HHHHHHHHHHHhhhCCChhHEEEEEEc-C-C---C----cEEEEEEecCCHHHHHHHHHHHHHhCCCCcceeeecccCHH
Confidence 7889999999988 8999998887765 1 1 1 156778999999999888887544333 3446677 89999
Q ss_pred HHHHHhhCCCCCCCchhhccccccCcccceeecccccCCCCHHHHHHHHHHHHcCC------ccEEEEeecCC---CCCC
Q 043814 329 RSVLYFAGYPNNTEPEILLDVQSLGKNYFKAKLDFVQEPVPETVLEGLWKMVLEED------IPIILWNPYGG---IMSK 399 (524)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~s~~~~~~~~~~~i~~~~~~~~~~~------~~~i~~~~~GG---~i~~ 399 (524)
+...++.... ..+.... .....|+.|+.+.. ++++++++.+++.+.+.. .+.++++++|| ++++
T Consensus 297 ~~~~~~~~~~---~~~~~~~---~~~~~~~~ks~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~ai~~ 369 (473)
T 3rja_A 297 ESVLSYSNFD---HVDFITP---QPVENFYAKSLTLK-SIKGDAVKNFVDYYFDVSNKVKDRFWFYQLDVHGGKNSQVTK 369 (473)
T ss_dssp HHHHHTSSSS---CCCCSSC---CCCBEEEEEEEEES-CCTTHHHHHHHHHHHHTGGGCCSSEEEEEEEECCSTTCGGGG
T ss_pred HHHHhhhcCC---CcccccC---CCCCcceEeccccC-CCCHHHHHHHHHHHHhcCCCCCCcceEEEEEecCCcchhhcC
Confidence 9876654321 1111100 00244667887754 699999999998885421 23678999998 6778
Q ss_pred CCCCCCCcccccCceEEEEEEeEeCCCCcccchhHHHHHHHHHHhccccccCCCCcccccCCCcccCCCCCCCcchhhhc
Q 043814 400 ISESEIAFPHRKGNIFTIQYMNAWKDGDEKNGTKHIGWIRRLYDYMAPYVSMFPRAAYVNYRDLDLGINKKFNTSYTEAS 479 (524)
Q Consensus 400 v~~~~tAf~~R~~~~~~~~~~~~w~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~g~Y~Ny~d~~~~~~~~~~~~~~~~~ 479 (524)
+++++|||+||+ ..|.+++.+.|.+.. +.+++..+|++++++.+.+.......|+|+||+|.+++ ..
T Consensus 370 v~~~~TAf~hR~-~~~~~~~~~~w~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~YvNy~d~~~~-----------~~ 436 (473)
T 3rja_A 370 VTNAETAYPHRD-KLWLIQFYDRYDNNQ-TYPETSFKFLDGWVNSVTKALPKSDWGMYINYADPRMD-----------RD 436 (473)
T ss_dssp SCTTTSSCCCTT-CSEEEEEEEEECTTS-CCCTTTHHHHHHHHHHHHTTSCGGGEECCGGGCCCSSC-----------HH
T ss_pred CCCCCCccccCC-ccEEEEEEEEeCCCC-ccchHHHHHHHHHHHHHHhhCCCCCCceEecCCCcccc-----------ch
Confidence 899999999999 689999999996411 23456678888777776544322345899999999864 13
Q ss_pred hhhhhhhcccHHHHHHHHhhcCCCCCCccCCCCCCCC
Q 043814 480 AWGTKYFKDNFNRLVRVKIKVDPDNIFRHEQSIPPVP 516 (524)
Q Consensus 480 ~~~~~y~g~n~~RL~~IK~kyDP~nvF~~~~~I~~~~ 516 (524)
.|++.|||+||+||++||+||||+|+|+++|+|+|.+
T Consensus 437 ~~~~~yyg~n~~RL~~vK~kyDP~n~F~~~qsI~p~~ 473 (473)
T 3rja_A 437 YATKVYYGENLARLQKLKAKFDPTDRFYYPQAVRPVK 473 (473)
T ss_dssp HHHHHHHGGGHHHHHHHHHHHCTTCTTCCTTSCCCCC
T ss_pred hHHHHHHHHHHHHHHHHhhccCchhhCCCCcCCCCCC
Confidence 6999999999999999999999999999999999864
No 5
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=100.00 E-value=8.7e-72 Score=596.62 Aligned_cols=449 Identities=22% Similarity=0.387 Sum_probs=350.7
Q ss_pred ceeecCCCCCchhHHhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHhCCCeEEEEeCCcCCCCCccccCCCCCe
Q 043814 32 SNFYTPNNSSFLSVLESSAQNLRYLVPSMPKPEFIFTPLNESHVRAAVICSRDLRIHLRIRSGGHDYEGLSYVSQIETPF 111 (524)
Q Consensus 32 ~~~~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~p~s~edv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~~~~~ 111 (524)
..+++|+|+.|+++++ .||.|| ...|.+|++|++++||+++|++|+++++||++||||||+.+.+...+ ++
T Consensus 10 ~~~~~p~~~~y~~~~~--~~n~~~----~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~~~~~---~g 80 (501)
T 3pop_A 10 PFTVGREDPRYIELSH--SDNHRF----VVEPEEFFLPATPDDVVASLQKAVTEGRGVACRSGGHCGQDFVGTPR---RD 80 (501)
T ss_dssp CEEEETTSTTHHHHTC--CSCTTS----CCCCSEEEECSSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTSSC---CS
T ss_pred CceECCCCcchHHHHH--HHhhcc----CCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEeCCccCCCccccCC---CE
Confidence 3578999999999863 556665 46999999999999999999999999999999999999998776543 48
Q ss_pred EEEEcCCCCceEEeCCCCeEEEeCCCCHHHHHHHHHH-hCCCceEecCCCCCccccccccCCCCCCCccccCCcccceeE
Q 043814 112 FLLDLAKLRSIEVDINDNTAWVQAGATIGELYYRIAE-KSNTQGFTAGLCPSVGSGGHITGGGYGTMMRKYGLGADNVVD 190 (524)
Q Consensus 112 vvIdl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~-~g~~l~~~~g~~~~vgvgG~~~ggg~G~~~~~~G~~~d~v~~ 190 (524)
++|||++||+|++|+++++|+||+|+++.+|+++|.+ +| +.++.|.|++|||||+++|||+|+++++||+++|+|++
T Consensus 81 vvIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~~ 158 (501)
T 3pop_A 81 LVLDLHNLHAIGPAADGAGVRVGSGATVDQVQKALFRRWN--AALPLGACSAVGMGGLVAGGGYGPLSRQLGLVVDHLHA 158 (501)
T ss_dssp EEEECTTCCCEEECTTSSSEEEETTCBHHHHHHHHHHHHS--BCCCCCSBTTCBHHHHHHHCCCCTTHHHHCCGGGGEEE
T ss_pred EEEEecccCCeEEcCCCCEEEEECCcCHHHHHHHHHhhcC--eEeCCCCCCCceEeeccccCCCcccccccccHHHhEEE
Confidence 9999999999999999999999999999999999974 56 67889999999999999999999999999999999999
Q ss_pred EEEEc--cCCc--EEe----ccCCCchhhhhhhccCCCcceEEEEEEEEE----------EecC-ceEEEEEEEecch--
Q 043814 191 ARIVD--ASGR--ILD----REAMGEDLFWAIRGGGGGSFGIILAWKVKL----------VPVP-ATVTVFTVSKTLE-- 249 (524)
Q Consensus 191 ~~vv~--~~G~--v~~----~~~~~~dlf~a~rg~~~g~~GIvt~~tlk~----------~p~~-~~~~~~~~~~~~~-- 249 (524)
+|||+ +||+ +++ ++.+|+|||||+||||+|+|||||+++||+ +|.+ ..+..+.+.|...
T Consensus 159 ~evV~~da~G~~~~v~~~~~~~~~~~DLf~a~rG~G~g~fGIVt~~~lk~~~~~~~~~~~~p~~~~~v~~~~~~~~~~~~ 238 (501)
T 3pop_A 159 VEVAVVDESRTVRLVTARADDTGDLGELFWAHTGGGGGNFGVVTAYEFRSPEHLATEPVGLPRAAGRLHVQKVVFPWAMI 238 (501)
T ss_dssp EEEEEECTTSCEEEEEEETTCCHHHHHHHHHTTTSCTTSSCEEEEEEECCCTTTCBTTTTBCBCCSEEEEEEEEEEGGGC
T ss_pred EEEEEecCCCCEEEEEeccCCCCCCccHHHHhhccCCCCcEEEEEEEEEeccccCCChhhcCCCCceEEEEEEEEchhhc
Confidence 99999 8999 443 235789999999998559999999999999 6654 4566667776542
Q ss_pred --hhHHHHHHHHHHHHh--hccccc--eEEEEEEeecCCCCCCceEEEEEEEEecCChHHHHHHHHhhCCc------CCC
Q 043814 250 --QGATKILYKWQQVAD--KLDEDL--FIRVIIQLANAGPKGKKTVTTSYNALFLGDSERLLQVIHKRFPE------LGL 317 (524)
Q Consensus 250 --~~~~~~~~~~~~~~~--~~p~~~--~~~~~~~~~~~~~~g~~~~~v~~~~~~~G~~~~~~~~l~~~~~~------~~~ 317 (524)
+.+.++++.|++|.. ..|++. .+...+...+. ..+ .+.+..+|.|+.+++.+.+.+++.. +.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~g~~~~~~~~l~~~~~~~~~~~g~~p 313 (501)
T 3pop_A 239 DETSFVTVMRRFFEWHERHSEPGSPESSLFATFFVNHV-SSG----VLQLMVQQDADVDPEGEILARFVASLTEGTGVVG 313 (501)
T ss_dssp CHHHHHHHHHHHHHHHHHSCCTTCGGGGEEEEEEEECG-GGC----EEEEEEEEETTTCTTCHHHHHHHHHHHTTSSCCC
T ss_pred CHHHHHHHHHHHHHHHhhccCCCccccceEEEEEecCC-CCC----eEEEEEEEeCChHHHHHHHHHHHHhhhhccCCCc
Confidence 234577888888875 345442 22222222210 011 2455667788876655555443321 222
Q ss_pred CcCcccccChHHHHHHhhCCCCCCCchhhccccccCcccceeecccccCCCCHHHHHHHHHHHHcC---CccEEEEeecC
Q 043814 318 TRNDCIETSWIRSVLYFAGYPNNTEPEILLDVQSLGKNYFKAKLDFVQEPVPETVLEGLWKMVLEE---DIPIILWNPYG 394 (524)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~s~~~~~~~~~~~i~~~~~~~~~~---~~~~i~~~~~G 394 (524)
... +.+++|.+...+.. .+.+. .....+++.|+.++.++++++.++.+++.+... +.+.++++++|
T Consensus 314 ~~~-~~~~~~~~~~~~~~-~~~~~---------~~~~~~~~~ks~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~G 382 (501)
T 3pop_A 314 IPR-GGVMSWLTGTRYMS-QADCG---------DVMGARSASKSAYHRAAPTDEQLSVLHRHLHADHPGQASYVMFNSYG 382 (501)
T ss_dssp EEE-EEEEEHHHHHHHTC-BCSCG---------GGTTCEEEEEEEEESSCCCHHHHHHHHHHHTSSSCCTTEEEEEEECC
T ss_pred cce-eEEeCHHHHHhhhc-CCCCC---------cccccccceecccccCCCCHHHHHHHHHHHHhcCCCCceEEEEEecC
Confidence 223 77899998665432 11110 001235678899988889999999999988753 24678999999
Q ss_pred CCCCCCCCCCCCcccccCceEEEEEEeEeCCCCcccchhHHHHHHHHHHhcccccc------CCCCcccccCCCcccCCC
Q 043814 395 GIMSKISESEIAFPHRKGNIFTIQYMNAWKDGDEKNGTKHIGWIRRLYDYMAPYVS------MFPRAAYVNYRDLDLGIN 468 (524)
Q Consensus 395 G~i~~v~~~~tAf~~R~~~~~~~~~~~~w~~~~~~~~~~~~~w~~~~~~~~~~~~~------~~~~g~Y~Ny~d~~~~~~ 468 (524)
|+++++++++|||+||+ ..|.+++.+.|.++ +.++++.+|++++++.+.++.+ ....|+|+||+|.+++.+
T Consensus 383 Gav~~v~~~~TAf~hR~-~~~~~~~~~~w~~~--~~~~~~~~w~~~~~~~~~~~~~g~p~~~~~~~gaYvNy~d~dl~~~ 459 (501)
T 3pop_A 383 GEINRRGPSDAAVPQRD-SVVKSSWFSAWQDA--ELDELHLGWLRGLYEEFFAGTGGVPVTGGRTDGCYINYPDADLLDP 459 (501)
T ss_dssp GGGGGSCTTTSSCCCCS-CSEEEEEEEEESCG--GGHHHHHHHHHHHHHHHTGGGTTSCCTTSSBCCCCTTSCCGGGGCT
T ss_pred cccccCCCCCCCccCcC-ccEEEEEEEEeCCc--chHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCceeccCCCcccccc
Confidence 99999999999999998 68999999999865 4567889999999999876531 224699999999997632
Q ss_pred CCCCcchhhhchhhhhhhcccHHHHHHHHhhcCCCCCCccCCCCCC
Q 043814 469 KKFNTSYTEASAWGTKYFKDNFNRLVRVKIKVDPDNIFRHEQSIPP 514 (524)
Q Consensus 469 ~~~~~~~~~~~~~~~~y~g~n~~RL~~IK~kyDP~nvF~~~~~I~~ 514 (524)
+. ++ ....|++.|||+||+||++||+||||+|||+++|||+|
T Consensus 460 ~~-~~---~~~~w~~~Yyg~N~~RL~~vK~kyDP~n~F~~~qsI~p 501 (501)
T 3pop_A 460 AR-NR---SGEPWHHLYYKDNYARLRSAKRAWDPLNTFHHSMSIGL 501 (501)
T ss_dssp TT-CC---SSCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred cc-cc---ccchHHHHHhHhHHHHHHHHHHHhCcccccCCCCCCCC
Confidence 11 11 13359999999999999999999999999999999987
No 6
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=100.00 E-value=4.4e-69 Score=580.00 Aligned_cols=458 Identities=25% Similarity=0.433 Sum_probs=345.7
Q ss_pred HHHHhhhcCCCCCCCceeecCCCCCchhHHhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 043814 17 FIKCLTINSEVYIPFSNFYTPNNSSFLSVLESSAQNLRYLVPSMPKPEFIFTPLNESHVRAAVICSRDLRIHLRIRSGGH 96 (524)
Q Consensus 17 ~~~~l~~~~~~~~~~~~~~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~p~s~edv~~~v~~a~~~~~~v~~~ggGh 96 (524)
-.+||... ...+++|+|+.|++++ +..||.||. ..|.+|++|++++||+++|++|+++++||.+|||||
T Consensus 23 ~~~~l~~~------~~~v~~p~d~~Y~~~~-~~~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh 91 (523)
T 2wdx_A 23 GERCLPPA------GPVKVTPDDPRYLNLK-LRGANSRFN----GEPDYIHLVGSTQQVADAVEETVRTGKRVAVRSGGH 91 (523)
T ss_dssp ---CCCCC------CCEEECTTSTTHHHHH-TCSSCTTCC----CCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCC
T ss_pred chhhcccC------CCeEECCCCcchHHHH-hhhhhhccc----CCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEEcCCC
Confidence 34898875 2578999999999986 246788885 489999999999999999999999999999999999
Q ss_pred CCCCCccccCCCCCeEEEEcCCCCceEEeCCCCeEEEeCCCCHHHHHHHHHH-hCCCceEecCCCCCccccccccCCCCC
Q 043814 97 DYEGLSYVSQIETPFFLLDLAKLRSIEVDINDNTAWVQAGATIGELYYRIAE-KSNTQGFTAGLCPSVGSGGHITGGGYG 175 (524)
Q Consensus 97 ~~~g~~~~~~~~~~~vvIdl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~-~g~~l~~~~g~~~~vgvgG~~~ggg~G 175 (524)
|+.+.+...+ ++++|||++||+|++|+++.+|+||+|+++.+|+++|.+ +| +.++.|.|++||+||+++|||+|
T Consensus 92 ~~~g~~~~~~---~gvvIdl~~m~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g 166 (523)
T 2wdx_A 92 CFEDFVDNPD---VKVIIDMSLLTEIAYDPSMNAFLIEPGNTLSEVYEKLYLGWN--VTIPGGVCGGVGVGGHICGGGYG 166 (523)
T ss_dssp CSSSSSSSTT---CCEEEECTTCCCEEEETTTTEEEECTTCBHHHHHHHHHHHHS--CCCCCCCCTTCBHHHHHHHTCCC
T ss_pred CCCCCccCCC---CeEEEEcccCCCEEEcCCCCEEEEcCCCCHHHHHHHHHHhcC--eEEccCCCCCCeeCccccCCCCC
Confidence 9998776532 489999999999999999999999999999999999984 87 57788999999999999999999
Q ss_pred CCccccCCcccceeEEEEEccC--CcEEe---ccC-CCch--hhhhhhccCCCcceEEEEEEEEE-----------EecC
Q 043814 176 TMMRKYGLGADNVVDARIVDAS--GRILD---REA-MGED--LFWAIRGGGGGSFGIILAWKVKL-----------VPVP 236 (524)
Q Consensus 176 ~~~~~~G~~~d~v~~~~vv~~~--G~v~~---~~~-~~~d--lf~a~rg~~~g~~GIvt~~tlk~-----------~p~~ 236 (524)
+++++||+++|+|+++|||++| |+++. +.. +++| ||||+|||++|+|||||+++||+ +|.|
T Consensus 167 ~~s~~~G~~~D~v~~~evV~~d~~G~v~~~~~~~~~~~~~~DLf~a~rGgg~g~~GIVt~~~l~l~~~~~~~~~~~~p~~ 246 (523)
T 2wdx_A 167 PLSRQFGSVVDYLYAVEVVVVNKQGKARVIVATRERDDPHHDLWWAHTGGGGGNFGVVTKYWMRVPEDVGRNPERLLPKP 246 (523)
T ss_dssp TTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCSSSSSEEEEEEECCSSCCCSCGGGSSCCC
T ss_pred cccccccChhheEEEEEEEEecCCccEEEEecccccCCCChHHHHHhhccCCCCcEEEEEEEEEeecccCCCcccccCCC
Confidence 9999999999999999999955 99753 322 4555 99999987668999999999999 9987
Q ss_pred c-eEEEEEEEecch----hhHHHHHHHHHHHHhh--ccccc--eEEEEEEeecCCCCCCceEEEEEEEEecCChHHHHHH
Q 043814 237 A-TVTVFTVSKTLE----QGATKILYKWQQVADK--LDEDL--FIRVIIQLANAGPKGKKTVTTSYNALFLGDSERLLQV 307 (524)
Q Consensus 237 ~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~p~~~--~~~~~~~~~~~~~~g~~~~~v~~~~~~~G~~~~~~~~ 307 (524)
+ .+..+.+.|+.. +...++++.|++|... .|++. .+...+...+. ..+.....+.+..+|.|+.++..+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~g~~~~~~~~ 325 (523)
T 2wdx_A 247 PATLLTSTVTFDWAGMTEAAFSRLLRNHGEWYERNSGPDSPYTGLWSQLMIGNE-VPGMGESGFMMPIQVDATRPDARRL 325 (523)
T ss_dssp CSEEEEEEEECCGGGCCHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEECC-CTTCTTCSEEEEEEEETTSTTHHHH
T ss_pred cccEEEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCccccceEEEEEeccC-CCCCcceeEEEEEEEeCCHHHHHHH
Confidence 6 456667777542 2346788888888764 46552 22222222211 1121112345567788887666555
Q ss_pred HHhhCC---c-CC-CCcCcccccChHHHHHHhhCCCCCCCchhhccccccCcccceeecccccCCCCHHHHHHHHHHHHc
Q 043814 308 IHKRFP---E-LG-LTRNDCIETSWIRSVLYFAGYPNNTEPEILLDVQSLGKNYFKAKLDFVQEPVPETVLEGLWKMVLE 382 (524)
Q Consensus 308 l~~~~~---~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~s~~~~~~~~~~~i~~~~~~~~~ 382 (524)
+.+++. . ++ +...++..++|.+....+ .. . ..+++.++.++.++++.+.+..+++.+..
T Consensus 326 l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-------------~~-~--~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 389 (523)
T 2wdx_A 326 LDAHIEAVIDGVPPAEVPEPIEQRWLASTPGR-------------GG-R--GPASKTKAGYLRKRLTDRQIQAVYENMTH 389 (523)
T ss_dssp HHHHHHHHHTTCTTCBCCCCEEEETTSSCCCC-------------CS-S--CCEEEEEEEEESSCCCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhhcCCCccccceeccHHHHHHhh-------------cC-C--CCceeeecccccCCCCHHHHHHHHHHHHh
Confidence 544222 1 22 223344456665411000 00 0 11345577777667888889889888865
Q ss_pred C---CccEEEEeecCCCCCCCCCCCCCcccccCceEEEEEEeEeCCCCcccchhHHHHHHHHHHhcc------ccccCCC
Q 043814 383 E---DIPIILWNPYGGIMSKISESEIAFPHRKGNIFTIQYMNAWKDGDEKNGTKHIGWIRRLYDYMA------PYVSMFP 453 (524)
Q Consensus 383 ~---~~~~i~~~~~GG~i~~v~~~~tAf~~R~~~~~~~~~~~~w~~~~~~~~~~~~~w~~~~~~~~~------~~~~~~~ 453 (524)
. +.+.++++.+||++++++.++|+|+||+ ..|++++.+.|.++ +.++.+.+|++++++.+. |+.+...
T Consensus 390 ~~~~~~~~~~~~~~GG~v~~~~~~~ta~~~R~-~~~~~~~~~~w~~~--~~~~~~~~~~~~~~~~l~~~~~g~p~~~~~~ 466 (523)
T 2wdx_A 390 MDGIDYGAVWLIGYGGKVNTVDPAATALPQRD-AILKVNYITGWANP--GNEAKHLTWVRKLYADVYAETGGVPVPNDVS 466 (523)
T ss_dssp CTTCSEEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESSG--GGHHHHHHHHHHHHHHHTGGGTTSCCSCSSB
T ss_pred cCCCCceEEEEEecCCccccCCCccccccccC-ceEEEEEEEEcCCC--ccHHHHHHHHHHHHHHHHhhhcCCCccCCCC
Confidence 3 2367788999999999999999999999 68999999999865 356778999999998887 3211113
Q ss_pred CcccccCCCcccCCCCCCCcchhhhchhhhhhhcccHHHHHHHHhhcCCCCCCccCCCCCC
Q 043814 454 RAAYVNYRDLDLGINKKFNTSYTEASAWGTKYFKDNFNRLVRVKIKVDPDNIFRHEQSIPP 514 (524)
Q Consensus 454 ~g~Y~Ny~d~~~~~~~~~~~~~~~~~~~~~~y~g~n~~RL~~IK~kyDP~nvF~~~~~I~~ 514 (524)
.|+|+||+|.+++.++ +++++ ..|++.|||+||+||++||+||||+|||+++|+|+|
T Consensus 467 ~g~Y~Ny~d~~~~~~~-~~~s~---~~~~~~yyg~n~~RL~~iK~kyDP~~vF~~~qsI~p 523 (523)
T 2wdx_A 467 DGAYINYPDSDLADPG-LNTSG---VPWHDLYYKGNHPRLRKVKAAYDPRNHFHHALSIRP 523 (523)
T ss_dssp CCCCTTSCCGGGGCTT-TCCSS---CCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred CcceecCCcccccccc-cccch---hHHHHHHHHHHHHHHHHHHHHhCcHhhcCCCCCCCC
Confidence 5899999999876211 11111 149999999999999999999999999999999987
No 7
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=100.00 E-value=1.7e-67 Score=567.81 Aligned_cols=463 Identities=24% Similarity=0.400 Sum_probs=342.4
Q ss_pred cccccHHHHhhhcCCCCCCCceeecCCCCCchhHHhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHhCCCeEEE
Q 043814 12 SVLDNFIKCLTINSEVYIPFSNFYTPNNSSFLSVLESSAQNLRYLVPSMPKPEFIFTPLNESHVRAAVICSRDLRIHLRI 91 (524)
Q Consensus 12 ~~~~~~~~~l~~~~~~~~~~~~~~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~p~s~edv~~~v~~a~~~~~~v~~ 91 (524)
....+-..|+... ...+++|+|+.|++++ +..||.||. ..|.+|++|++++||+++|++|+++++||.+
T Consensus 16 ~~~~~~~~~~~~~------~~~v~~p~d~~Y~~~~-~~~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v 84 (521)
T 2ipi_A 16 IWEFDGGACGART------ALVKVDRVDRRYQDLV-TRGFNGRFR----GRPDVVYVVHTADQVVDAVNQAMAAGQRIAV 84 (521)
T ss_dssp -------------------CCCEEESSSTTHHHHH-TCCSCTTCC----CCCSEEEECSSHHHHHHHHHHHHHHTCCEEE
T ss_pred hhhccccccccCC------CCeEECCCCcchHHHH-hcccccccc----CCCCEEEEcCCHHHHHHHHHHHHHcCCeEEE
Confidence 3445566787775 2568999999999986 246677775 4899999999999999999999999999999
Q ss_pred EeCCcCCCCCccccCCCCCeEEEEcCCCCceEEeCCCCeEEEeCCCCHHHHHHHHH-HhCCCceEecCCCCCcccccccc
Q 043814 92 RSGGHDYEGLSYVSQIETPFFLLDLAKLRSIEVDINDNTAWVQAGATIGELYYRIA-EKSNTQGFTAGLCPSVGSGGHIT 170 (524)
Q Consensus 92 ~ggGh~~~g~~~~~~~~~~~vvIdl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~-~~g~~l~~~~g~~~~vgvgG~~~ 170 (524)
||||||+.+.+.... ++++|||++||+|++|+++.+|+||+|+++.+|+++|. ++| +.++.|.|++|||||+++
T Consensus 85 rggGh~~~g~~~~~~---~gvvIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~ 159 (521)
T 2ipi_A 85 RSGGHCFEGFVDDPA---VRAVIDMSQMRQVFYDSGKRAFAVEPGATLGETYRALYLDWG--VTIPAGVCPQVGVGGHVL 159 (521)
T ss_dssp ESSCCCTTCGGGCTT---CCEEEECTTCCCEEEETTTTEEEECTTSBHHHHHHHHHHHHS--BCCCCCSCTTCBHHHHTT
T ss_pred ECCCcCCCCCcccCC---CeEEEecccCCCeEEeCCCCEEEEeCCcCHHHHHHHHHHhcC--ceeCCCCCCCcccCCccc
Confidence 999999988765432 48999999999999999999999999999999999997 677 667889999999999999
Q ss_pred CCCCCCCccccCCcccceeEEEEEccC--CcEEe---ccC-CCc--hhhhhhhccCCCcceEEEEEEEEE----------
Q 043814 171 GGGYGTMMRKYGLGADNVVDARIVDAS--GRILD---REA-MGE--DLFWAIRGGGGGSFGIILAWKVKL---------- 232 (524)
Q Consensus 171 ggg~G~~~~~~G~~~d~v~~~~vv~~~--G~v~~---~~~-~~~--dlf~a~rg~~~g~~GIvt~~tlk~---------- 232 (524)
|||+|+++++||+++|+|+++|||++| |+++. +.. +++ |||||+|||++|+|||||+++||+
T Consensus 160 gGg~g~~s~~~G~~~D~v~~~evV~~d~~G~i~~~~~~~~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~~~~~~~~~~ 239 (521)
T 2ipi_A 160 GGGYGPLSRRDGVVADHLYAVEVVVVDASGRARKVVATSAADDPNRELWWAHTGGGGGNFGIVTRYWFRTPGATGTDPSQ 239 (521)
T ss_dssp TTCCCTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEECCTTCTTHHHHHHTTTSCSSSSCEEEEEEECCSSCCSSCGGG
T ss_pred CCCCCccccccccHhhcEEEEEEEEecCCccEEEEecccccCCCCHHHHHHHhcCCCCceEEEEEEEEEeecccCCCccc
Confidence 999999999999999999999999977 99742 222 444 599999997658999999999999
Q ss_pred -EecCc-eEEEEEEEecch----hhHHHHHHHHHHHHhh--ccccc--eEEEEEEeecCCCCCCceEEEEEEEEecCChH
Q 043814 233 -VPVPA-TVTVFTVSKTLE----QGATKILYKWQQVADK--LDEDL--FIRVIIQLANAGPKGKKTVTTSYNALFLGDSE 302 (524)
Q Consensus 233 -~p~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~p~~~--~~~~~~~~~~~~~~g~~~~~v~~~~~~~G~~~ 302 (524)
+|.|+ .+..+.+.|+.+ +...++++.|++|... .|++. .+...+...+. ..+ .+.+...|.|+.+
T Consensus 240 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~l~~~~~~~~~-~~~----~~~~~~~~~g~~~ 314 (521)
T 2ipi_A 240 LLPKAPTSTLRHIVTWDWSALTEEAFTRIIDNHGAWHQSNSAAGTPYASMHSVFYLNSR-AAG----QILLDIQIDGGLD 314 (521)
T ss_dssp SSCBCCSCEEEEEEEEESTTCCHHHHHHHHHHHHHHHHHSCSSSSGGGGCEEEEEEECT-TSC----EEEEEEEEETTST
T ss_pred ccCCCCceEEEEEEEecccccCHHHHHHHHHHHHHHHHhccCCCccccceEEEEEeccC-CCC----ceEEEEEeccCHH
Confidence 99876 355556666432 2345788888888754 45541 22222222211 112 2344566888776
Q ss_pred HHHHHHHhhCC---c-CC-CCcCcccccChHHHHHHhhCCCCCCCchhhccccccCcccceeecccccCCCCHHHHHHHH
Q 043814 303 RLLQVIHKRFP---E-LG-LTRNDCIETSWIRSVLYFAGYPNNTEPEILLDVQSLGKNYFKAKLDFVQEPVPETVLEGLW 377 (524)
Q Consensus 303 ~~~~~l~~~~~---~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~s~~~~~~~~~~~i~~~~ 377 (524)
+..+.+.+++. . ++ +...++..++|.+....+.... .. ..+++.++.++.++++.+.+..++
T Consensus 315 ~~~~~l~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~------------~~-~~~~~~~s~~~~~~~~~~~i~~~~ 381 (521)
T 2ipi_A 315 GAEALLNDFVAAVNEGTGVEPAVQRSTEPWLRATLANKFDT------------GG-FDRTKSKGAYLRKPWTAAQAATLY 381 (521)
T ss_dssp THHHHHHHHHHHHTTTCSSCCEEEEEEECHHHHHTCCCCCC------------TT-CCEEEEEEEEESSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCCCccceeeecCHHHHHHhhcCCC------------CC-CccceeeccccccCCCHHHHHHHH
Confidence 65555544221 1 22 2334556678887543221110 00 013455677776678888899999
Q ss_pred HHHHcCC--ccEEEEeecCCCCCCCCCCCCCcccccCceEEEEEEeEeCCCCcccchhHHHHHHHHHHhcccccc-----
Q 043814 378 KMVLEED--IPIILWNPYGGIMSKISESEIAFPHRKGNIFTIQYMNAWKDGDEKNGTKHIGWIRRLYDYMAPYVS----- 450 (524)
Q Consensus 378 ~~~~~~~--~~~i~~~~~GG~i~~v~~~~tAf~~R~~~~~~~~~~~~w~~~~~~~~~~~~~w~~~~~~~~~~~~~----- 450 (524)
+.+...+ .+.+.++++||++++++.++|||+||+ ..+.+++.+.|.++ +.++...+|++++++.+.....
T Consensus 382 ~~~~~~~~~~~~~~~~~~GG~v~~~~~~~ta~~~R~-~~~~~~~~~~w~~~--~~~~~~~~~~~~~~~~~~~~~~g~p~~ 458 (521)
T 2ipi_A 382 RHLSADSQVWGEVSLYSYGGKVNSVPETATATAQRD-SIIKVWMSATWMDP--AHDDANLAWIREIYREIFATTGGVPVP 458 (521)
T ss_dssp HHHHSCCSSEEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESCG--GGHHHHHHHHHHHHHHHTTTTTSSCCS
T ss_pred HHHHhCCCCceEEEEEecCCcccCCCCccccccccc-hhhhcceeEecCCC--CchHHHHHHHHHHHHHHHhhhcCCCcc
Confidence 9887643 367889999999999999999999998 68999999999865 3457789999999998873211
Q ss_pred -CCCCcccccCCCcccCCCCCCCcchhhhchhhhhhhcccHHHHHHHHhhcCCCCCCccCCCCCCC
Q 043814 451 -MFPRAAYVNYRDLDLGINKKFNTSYTEASAWGTKYFKDNFNRLVRVKIKVDPDNIFRHEQSIPPV 515 (524)
Q Consensus 451 -~~~~g~Y~Ny~d~~~~~~~~~~~~~~~~~~~~~~y~g~n~~RL~~IK~kyDP~nvF~~~~~I~~~ 515 (524)
....|+|+||+|.+++.++- +++ ...|++.|||+||+||++||+||||+|||+++|+|+|+
T Consensus 459 ~~~~~g~Y~Ny~d~~~~~~~~-~~~---~~~~~~~y~g~n~~RL~~iK~kyDP~~vF~~~qsI~p~ 520 (521)
T 2ipi_A 459 DDRTEGTFINYPDVDLVDERW-NTS---GVPWYTLYYKGNYPRLQKVKARWDPRDVFRHALSVRPP 520 (521)
T ss_dssp SSSBCCCCTTSCCGGGGCTTT-SCC---SCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred cCCCCceEeCCCCcccccccc-ccc---hhhHHHhhhhhHHHHHHHHHHHhCCcCEecCCCCCCCC
Confidence 11358999999998752110 011 12499999999999999999999999999999999985
No 8
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=100.00 E-value=1.6e-67 Score=566.21 Aligned_cols=459 Identities=23% Similarity=0.446 Sum_probs=357.7
Q ss_pred ccccccHHHHhhhcCCCCCCCceeecCCCCCchhHHhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHhCCCeEE
Q 043814 11 ISVLDNFIKCLTINSEVYIPFSNFYTPNNSSFLSVLESSAQNLRYLVPSMPKPEFIFTPLNESHVRAAVICSRDLRIHLR 90 (524)
Q Consensus 11 ~~~~~~~~~~l~~~~~~~~~~~~~~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~p~s~edv~~~v~~a~~~~~~v~ 90 (524)
....+.|++||+... ..++.|+++.|.... .+|+......|.+|++|++++||+++|++|+++++|+.
T Consensus 3 ~~~~~~l~~~l~~~~------~~~~~~~~~~y~~~~------~~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~ 70 (503)
T 1zr6_A 3 EAEFNSINACLAAAD------VEFHEEDSEGWDMDG------TAFNLRVDYDPAAIAIPRSTEDIAAAVQCGLDAGVQIS 70 (503)
T ss_dssp CCTTCHHHHHHHHTT------CEECCTTSHHHHHHT------SCSBGGGCCCCSEEEECCSHHHHHHHHHHHHHHTCCEE
T ss_pred hHHHHHHHHhhCcCC------ceecCCCccchHHHh------hhhhhcccCCCCEEEEeCCHHHHHHHHHHHHHcCCeEE
Confidence 345678999998752 246889999998763 24655556799999999999999999999999999999
Q ss_pred EEeCCcCCCCCccccCCCCCeEEEEcCCCCceEEeCCCCeEEEeCCCCHHHHHHHHHHhCCCceEecCCCCCcccccccc
Q 043814 91 IRSGGHDYEGLSYVSQIETPFFLLDLAKLRSIEVDINDNTAWVQAGATIGELYYRIAEKSNTQGFTAGLCPSVGSGGHIT 170 (524)
Q Consensus 91 ~~ggGh~~~g~~~~~~~~~~~vvIdl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~ 170 (524)
+||||||+.+.+.+.. +++++|||++||+|++| ++++|+||||+++.+|+++|.+++ ++.++.|.|++||+||+++
T Consensus 71 v~ggGh~~~~~~~~~~--~~gvvIdl~~l~~i~~d-~~~~v~v~aG~~~~~l~~~l~~~~-gl~~~~G~~~~vgvgG~~~ 146 (503)
T 1zr6_A 71 AKGGGHSYGSYGFGGE--DGHLMLELDRMYRVSVD-DNNVATIQGGARLGYTALELLDQG-NRALSHGTCPAVGVGGHVL 146 (503)
T ss_dssp EESSCCCTTCTTTTSS--SSCEEEECTTCCCEEEC-TTSCEEEETTCBHHHHHHHHHHTT-SEECCCCSCTTSBHHHHHH
T ss_pred EECCCcCCCCCcccCC--CCcEEEECccCCCEEEC-CCCeEEEecCCCHHHHHHHHHHcC-CEEeCCCCCCcCchhhhhc
Confidence 9999999987665411 24899999999999999 888999999999999999997775 4778899999999999999
Q ss_pred CCCCCCCccccCCcccceeEEEEEccCCcEEe-ccCCCchhhhhhhccCCCcceEEEEEEEEEEecCceEEEEEEEecc-
Q 043814 171 GGGYGTMMRKYGLGADNVVDARIVDASGRILD-REAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKTL- 248 (524)
Q Consensus 171 ggg~G~~~~~~G~~~d~v~~~~vv~~~G~v~~-~~~~~~dlf~a~rg~~~g~~GIvt~~tlk~~p~~~~~~~~~~~~~~- 248 (524)
|||+|+++++||+++|+|++++||++||++++ +..+|+||||++|||+ |+|||||+++||++|.|+....+.+.+.+
T Consensus 147 gGg~g~~s~~~G~~~D~v~~~~vV~a~G~i~~~~~~~~~dL~~a~rG~~-g~~GIVt~~~l~l~p~~~~~~~~~~~~~~~ 225 (503)
T 1zr6_A 147 GGGYGFATHTHGLTLDWLIGATVVLADASIVHVSETENADLFWALRGGG-GGFAIVSEFEFNTFEAPEIITTYQVTTTWN 225 (503)
T ss_dssp HCCCSTTHHHHCCGGGGEEEEEEECTTSCEEEEBTTBSHHHHHHHTTCC-SSSCEEEEEEECCEECCSCEEEEEEEECCC
T ss_pred CCCCCcccccccChhheEEEEEEEecCCCEEEeCCCCCccHHHHHhccC-CCcEEEEEEEEEEEecCceeEEEEEEEeCC
Confidence 99999999999999999999999999999997 5667899999999999 79999999999999999877777776654
Q ss_pred hhhHHHHHHHHHHHHhh-ccccceEEEEEEeecCCCCCCceEEEEEEEEecCChHHHHHHHHhhCCcCCC--CcCccccc
Q 043814 249 EQGATKILYKWQQVADK-LDEDLFIRVIIQLANAGPKGKKTVTTSYNALFLGDSERLLQVIHKRFPELGL--TRNDCIET 325 (524)
Q Consensus 249 ~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~G~~~~~~~~l~~~~~~~~~--~~~~~~~~ 325 (524)
.+++.++++.|+++... +|++++..+.+.. + .+.+..+|+|+.+++.+.+.+++..++. ...++..+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~------~----~~~~~~~~~g~~~~~~~~l~pl~~~~~~~~~~~~~~~~ 295 (503)
T 1zr6_A 226 RKQHVAGLKALQDWAQNTMPRELSMRLEINA------N----ALNWEGNFFGNAKDLKKILQPIMKKAGGKSTISKLVET 295 (503)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTBCCEEEEET------T----EEEEEEEESSCHHHHHHHHHHHHHHTTSCEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHhhcCChhHEEEEEEeC------C----eEEEEEEEECCHHHHHHHHHHHHHhcCcCCCcCceeeC
Confidence 34567789999999876 8888877766542 1 3556788999998887777765333333 12345667
Q ss_pred ChHHHHHHhhCCCCCCCchhhccccccCcccceeecccccCCCCHHHHHHHHHHHH-cCC----c-cEEEEeecCC---C
Q 043814 326 SWIRSVLYFAGYPNNTEPEILLDVQSLGKNYFKAKLDFVQEPVPETVLEGLWKMVL-EED----I-PIILWNPYGG---I 396 (524)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~s~~~~~~~~~~~i~~~~~~~~-~~~----~-~~i~~~~~GG---~ 396 (524)
+|.+....+.. +..... ......+..|+.++.++.+ ++++.++.+++.+. ... . +.+.++++|| +
T Consensus 296 ~~~~~~~~~~~---~~~~~~--~~p~g~~~~~~~~s~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~a 369 (503)
T 1zr6_A 296 DWYGQINTYLY---GADLNI--TYNYDVHEYFYANSLTAPR-LSDEAIQAFVDYKFDNSSVRPGRGWWIQWDFHGGKNSA 369 (503)
T ss_dssp CHHHHHTTSCT---TCCSSC--SSCCCCCBCEEEEEEEESS-CCHHHHHHHHHHHHHSCCCCTTEEEEEEEEECCSTTCS
T ss_pred CHHHHHHHHcC---CCcccc--cCCCCccccceecccchhh-CCHHHHHHHHHHHHhhCCCCCCcceEEEEEEcCCchhh
Confidence 88764432211 000000 0011112345667777766 88888999988887 532 1 4578899999 8
Q ss_pred CCCCCCCCCCcccccCceEEEEEEeEe-----CCCCcccchhHHHHHHHHHHhccccccCCCCcccccCCCcccCCCCCC
Q 043814 397 MSKISESEIAFPHRKGNIFTIQYMNAW-----KDGDEKNGTKHIGWIRRLYDYMAPYVSMFPRAAYVNYRDLDLGINKKF 471 (524)
Q Consensus 397 i~~v~~~~tAf~~R~~~~~~~~~~~~w-----~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~g~Y~Ny~d~~~~~~~~~ 471 (524)
+++++.++++|+||+ ..|.+++...| .++ +.++...+|++++++.+.........|+|+||+|.+++
T Consensus 370 v~~~~~~~ta~~~R~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~g~Y~Nyad~~~~----- 441 (503)
T 1zr6_A 370 LAAVSNDETAYAHRD-QLWLWQFYDSIYDYENNTS--PYPESGFEFMQGFVATIEDTLPEDRKGKYFNYADTTLT----- 441 (503)
T ss_dssp GGGSCTTTSSCCCTT-CSEEEEEEEEETTTTTCCT--TTTTSCHHHHHHHHHHHHTTSCGGGCBCCGGGCCTTCC-----
T ss_pred hcCCCcccCCccccc-ceeEEEEEeeeccccCCCc--cchHHHHHHHHHHHHHHHhhCCCCCCceeccCCCcccc-----
Confidence 888888999999998 57888886776 222 22345567777776665543211124799999999865
Q ss_pred CcchhhhchhhhhhhcccHHHHHHHHhhcCCCCCCccCCCCCCCC
Q 043814 472 NTSYTEASAWGTKYFKDNFNRLVRVKIKVDPDNIFRHEQSIPPVP 516 (524)
Q Consensus 472 ~~~~~~~~~~~~~y~g~n~~RL~~IK~kyDP~nvF~~~~~I~~~~ 516 (524)
...|++.|||+||+||++||+||||+|||+++|+|+|..
T Consensus 442 ------~~~~~~~~yG~n~~RL~~iK~kyDP~~vF~~~~~i~~~~ 480 (503)
T 1zr6_A 442 ------KEEAQKLYWRGNLEKLQAIKAKYDPEDVFGNVVSVEPIA 480 (503)
T ss_dssp ------HHHHHHHHHGGGHHHHHHHHHHHCTTCTTCCTTSCCCCC
T ss_pred ------cchHHHHHHHhHHHHHHHHHHHhCchhhcCCCCCCCchh
Confidence 126999999999999999999999999999999998854
No 9
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=100.00 E-value=1.9e-67 Score=567.60 Aligned_cols=451 Identities=25% Similarity=0.460 Sum_probs=343.1
Q ss_pred CceeecCCCCCchhHHhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHhCCCeEEEEeCCcCCCCCccccCCCCC
Q 043814 31 FSNFYTPNNSSFLSVLESSAQNLRYLVPSMPKPEFIFTPLNESHVRAAVICSRDLRIHLRIRSGGHDYEGLSYVSQIETP 110 (524)
Q Consensus 31 ~~~~~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~p~s~edv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~~~~ 110 (524)
...|++|+|+.|+++++ .||.||. ..|.+|++|++++||+++|++|+++++||.+||||||+.+.+.... +
T Consensus 33 ~~~v~~p~~~~Y~~~~~--~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~---~ 103 (530)
T 2y3s_A 33 HIDSVAPGDIRYEDLRR--GENLRFV----GDPEEIHLVGSAAEIEQVLSRAVRSGKRVAVRSGGHCYEDFVANSD---V 103 (530)
T ss_dssp -CCEECTTSTTHHHHTC--CSCTTCC----CCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTCTT---C
T ss_pred CceEECCCCccHHHHHh--Hhhhhcc----CCCCEEEecCCHHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccCC---C
Confidence 45689999999999864 5677774 5899999999999999999999999999999999999988665432 4
Q ss_pred eEEEEcCCCCceEEeCCCCeEEEeCCCCHHHHHHHHHH-hCCCceEecCCCCCccccccccCCCCCCCccccCCccccee
Q 043814 111 FFLLDLAKLRSIEVDINDNTAWVQAGATIGELYYRIAE-KSNTQGFTAGLCPSVGSGGHITGGGYGTMMRKYGLGADNVV 189 (524)
Q Consensus 111 ~vvIdl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~-~g~~l~~~~g~~~~vgvgG~~~ggg~G~~~~~~G~~~d~v~ 189 (524)
+++|||++||+|++|+++++|+||+|+++.+|+++|.+ +| +.++.|.|++||+||+++|||+|+++++||+++|+|+
T Consensus 104 gvvIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~ 181 (530)
T 2y3s_A 104 RVVMDMSRLSAVGFDEERGAFAVEAGATLGAVYKTLFRVWG--VTLPGGACPDVGAGGHILGGGYGPLSRMHGSIVDYLH 181 (530)
T ss_dssp CEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHHS--CCCCCCSCTTCBHHHHHHTTCCCTTHHHHCCGGGGEE
T ss_pred eEEEEcccCCCEEEcCCCCEEEEeCCCCHHHHHHHHHhhcC--eEEeCCCCCCCCcCCCcCCCCCCcccccccchhhhee
Confidence 89999999999999999999999999999999999985 77 6778899999999999999999999999999999999
Q ss_pred EEEEEc--cCCcEEe---ccC-CCc--hhhhhhhccCCCcceEEEEEEEEE------------EecCc-eEEEEEEEecc
Q 043814 190 DARIVD--ASGRILD---REA-MGE--DLFWAIRGGGGGSFGIILAWKVKL------------VPVPA-TVTVFTVSKTL 248 (524)
Q Consensus 190 ~~~vv~--~~G~v~~---~~~-~~~--dlf~a~rg~~~g~~GIvt~~tlk~------------~p~~~-~~~~~~~~~~~ 248 (524)
++|||+ ++|+++. +.. +++ |||||+|||++|+|||||+++||+ +|.|+ .+..+.+.|+.
T Consensus 182 ~~evV~~d~~G~i~~v~~~~~~~~~d~DLf~a~rG~g~g~fGIVt~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 261 (530)
T 2y3s_A 182 AVEVVVVDASGDARTVIATREPSDPNHDLWWAHTGGGGGNFGVVVRYWLRTAEADVPPEPGRLLPRPPAEVLLNTTVWPW 261 (530)
T ss_dssp EEEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCTTSSCEEEEEEECCCCSSCCSCGGGSSCCCCSEEEEEEEEEES
T ss_pred eEEEEEecCCCcEEEEeccccccCCChHHHHHHhcCCCCCcEEEEEEEEEeecccCccccccccCCCCceEEEEEEEecc
Confidence 999999 5599742 332 455 599999998668999999999999 88875 45566666643
Q ss_pred h----hhHHHHHHHHHHHHhh--ccccc--eEEEEEEeecCCCCCCceEEEEEEEEecCChHHHHHHHHhhCC---c-CC
Q 043814 249 E----QGATKILYKWQQVADK--LDEDL--FIRVIIQLANAGPKGKKTVTTSYNALFLGDSERLLQVIHKRFP---E-LG 316 (524)
Q Consensus 249 ~----~~~~~~~~~~~~~~~~--~p~~~--~~~~~~~~~~~~~~g~~~~~v~~~~~~~G~~~~~~~~l~~~~~---~-~~ 316 (524)
+ +...++++.|++|... .|++. .+...+...+ .... .+.+...|.|+.++..+.+.+++. . ++
T Consensus 262 ~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~g~~~~~~~~l~p~~~~l~~~~g 336 (530)
T 2y3s_A 262 EGLDEAAFARLVRNHGRWFEQNSGPDSPWCDLYSVLALTR---SQSG--ALAMTTQLDATGPDAEKRLETYLAAVSEGVG 336 (530)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEEC---GGGS--EEEEEEEEECCSTTHHHHHHHHHHHHHTTCS
T ss_pred cccCHHHHHHHHHHHHHHhhhcCCCCcccceeEEEEEecc---CCCC--cEEEEEEEeCCHHHHHHHHHHHHHHHHhhcC
Confidence 2 2345788888888754 45442 1222222221 1111 234556688887666555544221 1 23
Q ss_pred -CCcCcccccChHHHHHHhhCCCCCCCchhhccccccCcccceeecccccCCCCHHHHHHHHHHHHcCC----ccEEEEe
Q 043814 317 -LTRNDCIETSWIRSVLYFAGYPNNTEPEILLDVQSLGKNYFKAKLDFVQEPVPETVLEGLWKMVLEED----IPIILWN 391 (524)
Q Consensus 317 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~s~~~~~~~~~~~i~~~~~~~~~~~----~~~i~~~ 391 (524)
+....+..++|.+....+...+.+ . .. ..++.++.++.++++++.+..+++.+...+ .+.+.++
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~--~~-~r~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 405 (530)
T 2y3s_A 337 VQPHSDTRRLPWLHSTRWPGIAGDG--------D--MT-GRAKIKAAYARRSFDDRQIGTLYTRLTSTDYDNPAGVVALI 405 (530)
T ss_dssp SCCEEEEEEEEHHHHTTCHHHHCCC--------C--CC-SEEEEEEEEESSCCCHHHHHHHHHHHHCSSSCCTTCEEEEE
T ss_pred CCccceeeeccHHHHHHhhcCCCCC--------c--cc-ccceeeccccccCCCHHHHHHHHHHHHhcCCCCCceEEEEE
Confidence 233455677887743322110100 0 01 234567777776788888999998887532 3678899
Q ss_pred ecCCCCCCCCCCCCCcccccCceEEEEEEeEeCCCCcccchhHHHHHHHHHHhcc------ccccCCCCcccccCCCccc
Q 043814 392 PYGGIMSKISESEIAFPHRKGNIFTIQYMNAWKDGDEKNGTKHIGWIRRLYDYMA------PYVSMFPRAAYVNYRDLDL 465 (524)
Q Consensus 392 ~~GG~i~~v~~~~tAf~~R~~~~~~~~~~~~w~~~~~~~~~~~~~w~~~~~~~~~------~~~~~~~~g~Y~Ny~d~~~ 465 (524)
++||++++++.++|||+||+ ..|.+++.+.|.++. .++.+.+|++++++.+. |+.+....|+|+||+|.++
T Consensus 406 ~~GGav~~~~~~~ta~~~R~-~~~~~~~~~~w~~~~--~~~~~~~w~~~~~~~l~~~~~g~p~~~~~~~g~Y~Ny~d~~~ 482 (530)
T 2y3s_A 406 AYGGKVNAVPADRTAVAQRD-SILKIVYVTTWEDPA--QDPVHVRWIRELYRDVYADTGGVPVPGGAADGAYVNYPDVDL 482 (530)
T ss_dssp ECCGGGGGSCTTSSSCCCCS-CSEEEEEEEEECCTT--CHHHHHHHHHHHHHHHTGGGTTSCCTTTTBCCCCTTSCCGGG
T ss_pred ecCCccccCCCCcCcccccc-cceeEEEEEecCCCc--chHHHHHHHHHHHHHHHhhhcCCCcccCCCCceEeCCcCccc
Confidence 99999999999999999998 689999999998763 45778999999999887 3211113589999999987
Q ss_pred CCCCCCCcchhhhchhhhhhhcccHHHHHHHHhhcCCCCCCccCCCCCCC
Q 043814 466 GINKKFNTSYTEASAWGTKYFKDNFNRLVRVKIKVDPDNIFRHEQSIPPV 515 (524)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~y~g~n~~RL~~IK~kyDP~nvF~~~~~I~~~ 515 (524)
+.++ .+++ ...|++.|||+||+||++||+||||+|||+++|+|+|+
T Consensus 483 ~~~~-~~~s---~~~~~~~yyg~n~~RL~~iK~kyDP~nvF~~~q~I~p~ 528 (530)
T 2y3s_A 483 ADEE-WNTS---GVPWSELYYKDAYPRLQAVKARWDPRNVFRHALSVRVP 528 (530)
T ss_dssp GCTT-TCCS---SCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred cccc-cccc---hhHHHHHHHHHHHHHHHHHHHHhCchhhcCCCCCCCCC
Confidence 6211 1111 12499999999999999999999999999999999986
No 10
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=100.00 E-value=5.2e-65 Score=541.95 Aligned_cols=432 Identities=21% Similarity=0.294 Sum_probs=335.4
Q ss_pred ceeecCCCCCchhHHhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHhCCCeEEEEeCCcCCCCCccccCCCCCe
Q 043814 32 SNFYTPNNSSFLSVLESSAQNLRYLVPSMPKPEFIFTPLNESHVRAAVICSRDLRIHLRIRSGGHDYEGLSYVSQIETPF 111 (524)
Q Consensus 32 ~~~~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~p~s~edv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~~~~~ 111 (524)
..|++|+++.|+.++. +|+......|.+|++|++++||+++|++|+++++|+.+||||||+.+.+...+ +
T Consensus 14 ~~v~~p~~~~y~~~~~------~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~~~~~~----g 83 (459)
T 2bvf_A 14 GEVIYPDDSGFDAIAN------IWDGRHLQRPSLIARCLSAGDVAKSVRYACDNGLEISVRSGGHNPNGYATNDG----G 83 (459)
T ss_dssp SEEECTTSTTHHHHHC------CSCTTCCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCTTCCSS----S
T ss_pred ceEECCCCccHHHHHH------HhhhhccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEEcCCcCCCCccccCC----e
Confidence 5689999999998643 46666667999999999999999999999999999999999999988765444 8
Q ss_pred EEEEcCCCCceEEeCCCCeEEEeCCCCHHHHHHHHHHhCCCceEecCCCCCccccccccCCCCCCCccccCCcccceeEE
Q 043814 112 FLLDLAKLRSIEVDINDNTAWVQAGATIGELYYRIAEKSNTQGFTAGLCPSVGSGGHITGGGYGTMMRKYGLGADNVVDA 191 (524)
Q Consensus 112 vvIdl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~ggg~G~~~~~~G~~~d~v~~~ 191 (524)
++|||++||+|++|+++.+|+||||+++.+|+++|.++| +.++.|.|+++||||+++|||+|+++++||+++|+|+++
T Consensus 84 vvi~l~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~G--l~~~~g~~~~~gi~G~~~gGg~g~~~~~~G~~~d~v~~~ 161 (459)
T 2bvf_A 84 IVLDLRLMNSIHIDTAGSRARIGGGVISGDLVKEAAKFG--LAAVTGMHPKVGFCGLALNGGVGFLTPKYGLASDNILGA 161 (459)
T ss_dssp EEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHTTT--EEECCCSCTTSBHHHHHTTCCCCTTHHHHCCGGGGEEEE
T ss_pred EEEECCCCCCEEECCCCCEEEECCCCCHHHHHHHHHHcC--CEecCCCCCCcccceeecCCCCccccccccCHhHhEEEE
Confidence 999999999999999999999999999999999999987 778889999999999999999999999999999999999
Q ss_pred EEEccCCcEEe-ccCCCchhhhhhhccCCCcceEEEEEEEEEEecCceEEEEEEEecchhhHH--HHHHHHHHHHhhccc
Q 043814 192 RIVDASGRILD-REAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKTLEQGAT--KILYKWQQVADKLDE 268 (524)
Q Consensus 192 ~vv~~~G~v~~-~~~~~~dlf~a~rg~~~g~~GIvt~~tlk~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~p~ 268 (524)
|||++||++++ +..+|+||||++|||+ |+|||||+++||++|.|+.+..+.+.|... .+. ++++.|+++....|+
T Consensus 162 ~vV~~~G~i~~~~~~~~~dLf~a~rg~~-g~~GiVt~~~l~l~p~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 239 (459)
T 2bvf_A 162 TLVTATGDVIYCSDDERPELFWAVRGAG-PNFGVVTEVEVQLYELPRKMLAGFITWAPS-VSELAGLLTSLLDALNEMAD 239 (459)
T ss_dssp EEECTTSCEEEEESSSSHHHHHHHHHHG-GGTCEEEEEEEEEEECCCCEEEEEEEECCC-HHHHHHHHHHHHHHHHHTTT
T ss_pred EEEcCCCeEEEeCCCCChhhHhHhhccC-CccEEEEEEEEEEEECCCcEEEEEEEechH-HhhHHHHHHHHHHHHHhCcH
Confidence 99999999997 5667899999999988 999999999999999976666666666542 244 788889998877787
Q ss_pred cceEEEEEEeecCCCCCCceEEEEEEEEecCChHHHHHHHHhhCCcCC-CCcCcccccChHHHHHHhh---CCCCCCCch
Q 043814 269 DLFIRVIIQLANAGPKGKKTVTTSYNALFLGDSERLLQVIHKRFPELG-LTRNDCIETSWIRSVLYFA---GYPNNTEPE 344 (524)
Q Consensus 269 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~G~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 344 (524)
.+...+ .... ...+. ..+.+...|.|+.++..+.+.+. ..++ +...++..++|.+...... .++
T Consensus 240 ~~~~~~-~~~~--~~~~~--~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 307 (459)
T 2bvf_A 240 HIYPSV-FVGV--DENRA--PSVTVCVGHLGGLDIAERDIARL-RGLGRTVSDSIAVRSYDEVVALNAEVGSFE------ 307 (459)
T ss_dssp TCCCEE-EEEE--CTTCC--EEEEEEEECCSCHHHHHHHHHHH-HTTSCCSEECCEEECHHHHHHHHHHHSCCC------
T ss_pred hhcccc-ccCc--ccCCC--ceEEEEEEEeCCHHHHHHHHHHH-HHhCcchhcceeecCHHHHHhcccccccCC------
Confidence 774433 2211 11122 24556678999987776666653 2332 2334556778876432211 001
Q ss_pred hhccccccCccccee-ecccccCCCCHHHHHHHHHHHHcCC-cc-EEEEeecCCCCCCCCCCCCCcccccCceEEEEEEe
Q 043814 345 ILLDVQSLGKNYFKA-KLDFVQEPVPETVLEGLWKMVLEED-IP-IILWNPYGGIMSKISESEIAFPHRKGNIFTIQYMN 421 (524)
Q Consensus 345 ~~~~~~~~~~~~f~~-~s~~~~~~~~~~~i~~~~~~~~~~~-~~-~i~~~~~GG~i~~v~~~~tAf~~R~~~~~~~~~~~ 421 (524)
...+ .+.. ++.++.+.++.+.++.+++.+...+ .. .+.++.+||++.+ .+.|||+||+. .| +.+..
T Consensus 308 ------~~~~-~~~~~~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~--~~~ta~~~R~~-~~-~~~~~ 376 (459)
T 2bvf_A 308 ------DGMS-NLWIDREIAMPNARFAEAIAGNLDKFVSEPASGGSVKLEIEGMPFGN--PKRTPARHRDA-MG-VLALA 376 (459)
T ss_dssp ------CSCE-EEEEEEEECSCHHHHHHHHHTTGGGCEEETTTTEEEEEEEECCCCCC--TTCCSSCCCSS-CE-EEEEE
T ss_pred ------CCCc-ceEeccccccCCCCCHHHHHHHHHHHhhCCCCCceeEEEEeCCccCC--CCCCCcccCCc-ce-EEEEE
Confidence 0111 2222 4566653345566666666655433 22 3344455887766 66789999994 67 88889
Q ss_pred EeCCCCcccchhHHHHHHHHHHhccccccCCCCcccccCCCcccCCCCCCCcchhhhchhhhhhhccc-HHHHHHHHhhc
Q 043814 422 AWKDGDEKNGTKHIGWIRRLYDYMAPYVSMFPRAAYVNYRDLDLGINKKFNTSYTEASAWGTKYFKDN-FNRLVRVKIKV 500 (524)
Q Consensus 422 ~w~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~g~Y~Ny~d~~~~~~~~~~~~~~~~~~~~~~y~g~n-~~RL~~IK~ky 500 (524)
.|.++. ..++.+.+|++++++.+.++......|+|+||+|.+.+ .|.+.|||+| |+||++||+||
T Consensus 377 ~w~~~~-~~~~~~~~~~~~~~~~l~~~~~~p~~g~Y~N~~d~~~~-------------~~~~~~yG~~n~~rL~~iK~ky 442 (459)
T 2bvf_A 377 EWSGAA-PGSEKYPELARELDAALLRAGVTTSGFGLLNNNSEVTA-------------EMVAEVYKPEVYSRLAAVKREY 442 (459)
T ss_dssp EECTTS-TTTTHHHHHHHHHHHHHHHTTCEEEEECCGGGCSSCCH-------------HHHHHHHCHHHHHHHHHHHHHH
T ss_pred EeCCCc-cchHHHHHHHHHHHHHhcccccCCCCCeeeCCCCCcch-------------HHHHHHhCcchHHHHHHHHHHh
Confidence 998663 13466789999999999987421235899999998732 6999999987 99999999999
Q ss_pred CCCCCCccCCCCCC
Q 043814 501 DPDNIFRHEQSIPP 514 (524)
Q Consensus 501 DP~nvF~~~~~I~~ 514 (524)
||+|+|+++|+|+|
T Consensus 443 DP~~vF~~~~~I~p 456 (459)
T 2bvf_A 443 DPENRFRHNYNIDP 456 (459)
T ss_dssp CTTCCCCSSSCCCC
T ss_pred CcccccCCCCCCCC
Confidence 99999999999997
No 11
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=100.00 E-value=2.6e-40 Score=357.93 Aligned_cols=222 Identities=15% Similarity=0.195 Sum_probs=176.3
Q ss_pred ccccHHHHhhhcCCCCCCCceeecCCCCCchhHHhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHh--C-CCeE
Q 043814 13 VLDNFIKCLTINSEVYIPFSNFYTPNNSSFLSVLESSAQNLRYLVPSMPKPEFIFTPLNESHVRAAVICSRD--L-RIHL 89 (524)
Q Consensus 13 ~~~~~~~~l~~~~~~~~~~~~~~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~p~s~edv~~~v~~a~~--~-~~~v 89 (524)
..++|.+||++.... ..+.+ +...+.. +...|+......|.+|++|+|++||+++|++|++ + ++|+
T Consensus 30 ~~~~~~~~l~~~~~~----~~v~~-~~~~~~~------~~~d~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~~~v 98 (534)
T 1w1o_A 30 RGRPWPASLAALALD----GKLRT-DSNATAA------ASTDFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPYTI 98 (534)
T ss_dssp ----------CTTTT----TCEEC-SHHHHHH------TSCCTTCSCCCCCSEEECCSSHHHHHHHHHHHHHCTTCCCCE
T ss_pred chHHHHHHHHhcCCC----ceEec-CHHHHHH------HhccccccccCCCCEEEecCCHHHHHHHHHHHHhcCCCCceE
Confidence 456788999884321 23433 3223332 2335766667799999999999999999999998 6 9999
Q ss_pred EEEeCCcCCCCCccccCCCCCeEEEEcCCCCce------EEeCCCCeEEEeCCCCHHHHHHHHHHhCCCceEec-CCCCC
Q 043814 90 RIRSGGHDYEGLSYVSQIETPFFLLDLAKLRSI------EVDINDNTAWVQAGATIGELYYRIAEKSNTQGFTA-GLCPS 162 (524)
Q Consensus 90 ~~~ggGh~~~g~~~~~~~~~~~vvIdl~~~~~i------~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~-g~~~~ 162 (524)
+++|||||+.|.+.+.+ +++|||++||+| ++|+++.+|+||||+++.+|.+++.++| +..+. +.+..
T Consensus 99 ~~~G~G~~~~g~~~~~~----gvvi~l~~m~~i~~~~~~~~d~~~~~v~v~aGv~~~~l~~~~~~~G--l~~~~~~~~~~ 172 (534)
T 1w1o_A 99 AFRGRGHSLMGQAFAPG----GVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARG--VAPRSWTDYLY 172 (534)
T ss_dssp EEESSCCCSSSTTCCTT----SEEEEGGGGGCSSSSCSEEECTTSSEEEEETTCBHHHHHHHHHTTT--EEESCCCSSCC
T ss_pred EEECCCCCCCCCcCCCC----eEEEECccccccccCccEEEcCCCCEEEECCCcCHHHHHHHHHHCC--CcccCCCCCCC
Confidence 99999999998877655 899999999985 7888889999999999999999999998 43333 44467
Q ss_pred ccccccccCCCCCCCccccCCcccceeEEEEEccCCcEEe-ccCCCchhhhhhhccCCCcceEEEEEEEEEEecCceEEE
Q 043814 163 VGSGGHITGGGYGTMMRKYGLGADNVVDARIVDASGRILD-REAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTV 241 (524)
Q Consensus 163 vgvgG~~~ggg~G~~~~~~G~~~d~v~~~~vv~~~G~v~~-~~~~~~dlf~a~rg~~~g~~GIvt~~tlk~~p~~~~~~~ 241 (524)
++|||++++||.|.++++||.++|+|++++||++||++++ +..+|+||||++|||+ |+|||||+++||++|.|+...+
T Consensus 173 ~tvGG~v~~~g~g~~~~~yG~~~d~v~~~evV~~dG~v~~~~~~~~~dL~~~~rGs~-G~~GIVt~~~l~l~p~~~~~~~ 251 (534)
T 1w1o_A 173 LTVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGGL-GQFGVITRARIAVEPAPARARW 251 (534)
T ss_dssp SBHHHHHTTCCCSTTHHHHCCGGGSEEEEEEEETTSCEEEEESSSSHHHHHHHTTCT-TCSEEEEEEEEEEEECCSEEEE
T ss_pred EEeceeccCCCccccccccccHhhhEEEEEEEeCCccEEEECCCCChhhHhhhcCCC-CCcEEEEEEEEEEEECCcceEE
Confidence 8999999999999999999999999999999999999997 5567899999999998 8999999999999999987777
Q ss_pred EEEEecchhhH
Q 043814 242 FTVSKTLEQGA 252 (524)
Q Consensus 242 ~~~~~~~~~~~ 252 (524)
+.+.|...+.+
T Consensus 252 ~~~~~~~~~~~ 262 (534)
T 1w1o_A 252 VRFVYTDFAAF 262 (534)
T ss_dssp EEEEESCHHHH
T ss_pred EEEEeCCHHHH
Confidence 66766543333
No 12
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=100.00 E-value=3.9e-34 Score=308.19 Aligned_cols=199 Identities=22% Similarity=0.286 Sum_probs=168.8
Q ss_pred cccCCCCCCCceEEEecCCHHHHHHHHHHHHh-CCCeEEEEeCCcCCCCCccccCCCCCeEEEEcCCCCceEEeC-----
Q 043814 53 LRYLVPSMPKPEFIFTPLNESHVRAAVICSRD-LRIHLRIRSGGHDYEGLSYVSQIETPFFLLDLAKLRSIEVDI----- 126 (524)
Q Consensus 53 ~r~~~~~~~~P~~vv~p~s~edv~~~v~~a~~-~~~~v~~~ggGh~~~g~~~~~~~~~~~vvIdl~~~~~i~~d~----- 126 (524)
..|+......|.+|++|+|++||+++|++|++ +++||++||||||+.|.+.+.+ +++|||++||+|++|.
T Consensus 52 ~d~~~~~~~~P~~vv~P~s~eeV~~iv~~a~~~~~~~v~~~GgGts~~g~~~~~~----gvvidl~~m~~i~i~~~~~~~ 127 (524)
T 2exr_A 52 RDFGGMNCVKPLAVVRPVGPEDIAGAVKAALRSDKLTVAARGNGHSINGQAMAEG----GLVVDMSTTAENHFEVGYLSG 127 (524)
T ss_dssp CCTTCCCCCCCSEEEECSSHHHHHHHHHHHHHSSSCCEEEESSSCCSSSTTCCTT----SEEEEGGGGTTSCEEEEECCS
T ss_pred ccccccccCCCCEEEecCCHHHHHHHHHHHHhhcCceEEEECCCcCCCCcccCCC----EEEEECcCCCCcEEeecccCC
Confidence 35766667799999999999999999999996 9999999999999998776554 8999999999987776
Q ss_pred CC--CeEEEeCCCCHHHHHHHHH-HhCCCceEe-cCCCCCccccccccCCCCCCCccccCCcccceeEEEEEccCCcEEe
Q 043814 127 ND--NTAWVQAGATIGELYYRIA-EKSNTQGFT-AGLCPSVGSGGHITGGGYGTMMRKYGLGADNVVDARIVDASGRILD 202 (524)
Q Consensus 127 ~~--~~v~v~~G~~~~~l~~~l~-~~g~~l~~~-~g~~~~vgvgG~~~ggg~G~~~~~~G~~~d~v~~~~vv~~~G~v~~ 202 (524)
+. .+|+||||+++.++++.+. ++|+ ..+ .+.++.++|||+++++|.|..+.+||.++|+|++++||++||++++
T Consensus 128 ~~~~~~v~v~aGv~~~~l~~~~l~~~Gl--~~~~~~s~~~~tiGG~va~ng~G~~~~~yG~~~d~V~~l~vV~~dG~v~~ 205 (524)
T 2exr_A 128 GDATAFVDVSGGALWEDVLKRCVSEYGL--APRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSNVTELDVVTGNGDVVT 205 (524)
T ss_dssp SSSSEEEEEETTCBHHHHHHHHHHHHSE--ECSCCCSCCSSBHHHHHTTCCCCTTHHHHCCGGGSEEEEEEEETTSCEEE
T ss_pred CCCceEEEEeCCcCHHHHHHHHHHHcCC--CCCCCCcCCceeecccCCCCCCcccccccCcHhhhEEEEEEEecCCeEEE
Confidence 55 7999999999999866554 8884 322 2445678999999999999999999999999999999999999997
Q ss_pred -ccCCCchhhhhhhccCCCcceEEEEEEEEEEecCceEEEEEEEecchhhHHHHHHH
Q 043814 203 -REAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKTLEQGATKILYK 258 (524)
Q Consensus 203 -~~~~~~dlf~a~rg~~~g~~GIvt~~tlk~~p~~~~~~~~~~~~~~~~~~~~~~~~ 258 (524)
...+|+||||+++||. |+|||||+++||++|.|+...++.+.|...+++.+.+..
T Consensus 206 ~~~~~~~dL~~~~~Gs~-GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~~~~~~~~ 261 (524)
T 2exr_A 206 CSEIENSELFFSVLGGL-GQFGIITRARVLLQPAPDMVRWIRVVYTEFDEFTQDAEW 261 (524)
T ss_dssp EESSSSHHHHHHHTTCT-TSSEEEEEEEEEEEECCSEEEEEEEEESCHHHHHHHHHH
T ss_pred ECCCCChhHHhHhhcCC-CccEEEEEEEEEEEEcCCeeEEEEEEeCCHHHHHHHHHH
Confidence 4457899999999998 999999999999999999777777777644444444433
No 13
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=100.00 E-value=2.4e-34 Score=305.80 Aligned_cols=205 Identities=25% Similarity=0.302 Sum_probs=179.0
Q ss_pred cccCCCCCCCceEEEecCCHHHHHHHHHHHHhCCCeEEEEeCCcCCCCCccccCCCCCeEEEEcCCCCce-EEeCCCCeE
Q 043814 53 LRYLVPSMPKPEFIFTPLNESHVRAAVICSRDLRIHLRIRSGGHDYEGLSYVSQIETPFFLLDLAKLRSI-EVDINDNTA 131 (524)
Q Consensus 53 ~r~~~~~~~~P~~vv~p~s~edv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~~~~~vvIdl~~~~~i-~~d~~~~~v 131 (524)
..|+..+...|.+|++|+|++||+++|++|+++++|++++|||||+.|.+.+.. ++++|||++||+| ++|+++.++
T Consensus 42 ~d~~~~~~~~p~~vv~P~s~eeV~~~v~~a~~~~~pv~~~GgGt~~~g~~~~~~---ggvvIdl~~m~~i~~id~~~~~v 118 (476)
T 3pm9_A 42 TEERNLYRGHSPLVLRPGSTEEVVAICKLANEARVALVPQGGNTGLVGGQTPHN---GEVVISLKRMDKIREIDTSSNTI 118 (476)
T ss_dssp BCTTCCCBCCCSCEECCCSHHHHHHHHHHHHHHTCCEEEESSSCCSSSTTCCCS---SCEEEECTTCCCEEEEETTTTEE
T ss_pred cccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCccCCC---CcEEEEeeCCCceEEEcCCCCeE
Confidence 357665677999999999999999999999999999999999999998877643 5899999999998 899999999
Q ss_pred EEeCCCCHHHHHHHHHHhCCCceEecCCCCCccccccccCCCCCCCccccCCcccceeEEEEEccCCcEEe------ccC
Q 043814 132 WVQAGATIGELYYRIAEKSNTQGFTAGLCPSVGSGGHITGGGYGTMMRKYGLGADNVVDARIVDASGRILD------REA 205 (524)
Q Consensus 132 ~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~ggg~G~~~~~~G~~~d~v~~~~vv~~~G~v~~------~~~ 205 (524)
+||||+++.+|.++|.++|+.+.+..+++..++|||++.+++.|..+.+||.++|+|++++||++||++++ ++.
T Consensus 119 ~V~aGv~~~~l~~~l~~~Gl~~~~~~~s~~~~tvGG~ia~nagG~~~~~yG~~~d~V~~levV~~dG~v~~~~~~~~k~~ 198 (476)
T 3pm9_A 119 TVEAGAILQRVQEKAAEVDRLFPLSLGAQGSCTIGGNLSTNAGGTAALAYGLARDMALGVEVVLADGRVMNLLSKLKKDN 198 (476)
T ss_dssp EEETTCBHHHHHHHHHHTTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEECTTSCEEECCCCCSCCC
T ss_pred EECCCcCHHHHHHHHHHhCCccCCCCCCCCcEEEccccCCCCCCCcccccCcHHHheeEEEEEccCCeEEEcCCcccCCC
Confidence 99999999999999999985434445777789999999999999999999999999999999999999996 133
Q ss_pred CCchhhhhhhccCCCcceEEEEEEEEEEecCceEEEEEEEecchhhHHHHHHHHHH
Q 043814 206 MGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKTLEQGATKILYKWQQ 261 (524)
Q Consensus 206 ~~~dlf~a~rg~~~g~~GIvt~~tlk~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (524)
.++||+|+++|+. |+|||||+++||++|.|+....+.+.|...+++.+++..+++
T Consensus 199 ~g~dl~~l~~Gs~-GtlGIIt~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~~ 253 (476)
T 3pm9_A 199 TGYDLRDLFIGAE-GTLGIITAATLKLFPKPRAVETAFVGLQSPDDALKLLGIAQG 253 (476)
T ss_dssp SSCCCHHHHTTST-TSSCEEEEEEEECEECCSEEEEEEEEESCHHHHHHHHHHHHH
T ss_pred CCcCHHHHhccCC-CCcEEEEEEEEEEeecCceeEEEEEEcCCHHHHHHHHHHHHH
Confidence 5789999999998 999999999999999998777777777655566666666654
No 14
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=100.00 E-value=8.6e-35 Score=321.35 Aligned_cols=239 Identities=21% Similarity=0.203 Sum_probs=192.4
Q ss_pred cccHHHHhhhcCCC--CCCCceeecCCCCCchhHHhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHhCCCeEEE
Q 043814 14 LDNFIKCLTINSEV--YIPFSNFYTPNNSSFLSVLESSAQNLRYLVPSMPKPEFIFTPLNESHVRAAVICSRDLRIHLRI 91 (524)
Q Consensus 14 ~~~~~~~l~~~~~~--~~~~~~~~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~p~s~edv~~~v~~a~~~~~~v~~ 91 (524)
.+++...|++.... .++..++.-.-...|.+..+ .|...+...|.+||+|+|+|||+++|++|+++++||++
T Consensus 161 ~~~~~~~l~~~~~~~~~~~~~r~~h~~g~s~~d~~~------~~~g~~~~~P~aVV~P~s~eeV~~iv~~A~~~~ipVvp 234 (658)
T 4bby_A 161 NEDFLHELKKTNISYSQEADDRVFRAHGHCLHEIFL------LREGMFERIPDIVLWPTCHDDVVKIVNLACKYNLCIIP 234 (658)
T ss_dssp CHHHHHHHHHHTCEEECCHHHHHHTSCCSCHHHHHH------HHSSCCSCCCSEEEECCSHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHhcccccCchHHHhhhcCCCCHHHHHH------HhCCcccCCcCEEEeeCCHHHHHHHHHHHHHCCCeEEE
Confidence 34455555554321 11222333333445555532 36666778999999999999999999999999999999
Q ss_pred EeCCcCCCCCcccc-CCCCCeEEEEcCCCCce-EEeCCCCeEEEeCCCCHHHHHHHHHHhCCCceEecCCCCCccccccc
Q 043814 92 RSGGHDYEGLSYVS-QIETPFFLLDLAKLRSI-EVDINDNTAWVQAGATIGELYYRIAEKSNTQGFTAGLCPSVGSGGHI 169 (524)
Q Consensus 92 ~ggGh~~~g~~~~~-~~~~~~vvIdl~~~~~i-~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~ 169 (524)
||||||+.|...+. +...++|+|||++||+| +||+++++++||||+++.+|.++|.++|+.+++.+++...++|||++
T Consensus 235 rGgGTsl~GG~~~~~~~~~ggVvLDlsrMnrIleiD~~~~~atVeaGv~~~~L~~~L~~~Gl~lp~dP~S~~~aTIGG~i 314 (658)
T 4bby_A 235 IGGGTSVSYGLMCPADETRTIISLDTSQMNRILWVDENNLTAHVEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWI 314 (658)
T ss_dssp ESSCCCSSSTTCCCTTCCSCEEEEECTTCCCEEEEETTTTEEEEETTCBHHHHHHHHHHHTEECCCCCTTTTTCBHHHHH
T ss_pred ECCCcCCCCCCCCCCCCCCcEEEEECccCCCcEEEcCCCCEEEEecCchHHHHHHHHHHcCCccCCCCCCccccEEeehh
Confidence 99999987655432 11135799999999997 89999999999999999999999999996655667888889999999
Q ss_pred cCCCCCCCccccCCcccceeEEEEEccCCcEEe-----ccCCCchhhhhhhccCCCcceEEEEEEEEEEecCceEEEEEE
Q 043814 170 TGGGYGTMMRKYGLGADNVVDARIVDASGRILD-----REAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTV 244 (524)
Q Consensus 170 ~ggg~G~~~~~~G~~~d~v~~~~vv~~~G~v~~-----~~~~~~dlf~a~rg~~~g~~GIvt~~tlk~~p~~~~~~~~~~ 244 (524)
++|+.|+.+.+||.+.|+|+++|||++||++++ ....++||+|+++||. |+|||||+++||++|.|+....+.+
T Consensus 315 Atna~G~~s~rYG~~~d~VlgleVVlpdG~i~~~~~~~k~~aGyDL~~L~iGSE-GTLGIITeatLrL~P~P~~~~~~~~ 393 (658)
T 4bby_A 315 STRASGMKKNIYGNIEDLVVHMKVVTPRGVIEKSCQGPRMSTGPDIHHFIMGSE-GTLGVITEATIKIRPTPEYQKYGSV 393 (658)
T ss_dssp HHTCCCTTHHHHCCHHHHEEEEEEEETTEEEECSCCCSSCCSSSCTHHHHTTCT-TSSCEEEEEEEECEECCSEEEEEEE
T ss_pred hcCCCCCCccCcCCHHHheeeEEEEeCCCcccccccccccCCCcCHHHHhccCC-CcCcceeeeeeeeccCCcccccccc
Confidence 999999999999999999999999999999985 2346789999999998 9999999999999999998877777
Q ss_pred EecchhhHHHHHHHH
Q 043814 245 SKTLEQGATKILYKW 259 (524)
Q Consensus 245 ~~~~~~~~~~~~~~~ 259 (524)
.|...+++.+++..+
T Consensus 394 ~f~d~~~a~~av~~i 408 (658)
T 4bby_A 394 AFPNFEQGVACLREI 408 (658)
T ss_dssp EESSHHHHHHHHHHH
T ss_pred ccCCchhhhhhHHHH
Confidence 776555555555444
No 15
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=100.00 E-value=1.9e-32 Score=291.26 Aligned_cols=179 Identities=20% Similarity=0.261 Sum_probs=160.0
Q ss_pred ccCCCCCCCceEEEecCCHHHHHHHHHHHHhC--CCeEEEEeCCcCCCCCccccCCCCCeEEEEcCCCCce-EEeCCCCe
Q 043814 54 RYLVPSMPKPEFIFTPLNESHVRAAVICSRDL--RIHLRIRSGGHDYEGLSYVSQIETPFFLLDLAKLRSI-EVDINDNT 130 (524)
Q Consensus 54 r~~~~~~~~P~~vv~p~s~edv~~~v~~a~~~--~~~v~~~ggGh~~~g~~~~~~~~~~~vvIdl~~~~~i-~~d~~~~~ 130 (524)
+|.. ....|.+|++|+|+|||+++|++|+++ ++|++++|+|||+.+.+...+ +++|||++||+| ++|+++++
T Consensus 35 ~W~~-~~~~p~~vv~P~s~eev~~~v~~a~~~~~~~~v~~~G~G~s~~~~~~~~~----gvvIdl~~l~~i~~~d~~~~~ 109 (481)
T 4feh_A 35 GWGR-TAPSVANVLRTPDAEMIVKAVARVAESGGGRGAIARGLGRSYGDNAQNGG----GLVIDMTPLNTIHSIDADTKL 109 (481)
T ss_dssp CTTC-CSCEEEEEEECSCHHHHHHHHHHHHTTTCTTCEEEECSSCSSSSTTCCTT----SEEEECTTCCCEEEEETTTTE
T ss_pred cccC-CCCCCCEEEeCCCHHHHHHHHHHHHHcCCCceEEEEeCCcCCCCCCCCcC----eEEEECccCCCceEEcCCCCE
Confidence 5854 578999999999999999999999999 799999999999976654333 899999999998 99999999
Q ss_pred EEEeCCCCHHHHHHHHHHhCCCceEecCCCCCccccccccCCCCCCCccccCCcccceeEEEEEccCCcEEe-ccC-CCc
Q 043814 131 AWVQAGATIGELYYRIAEKSNTQGFTAGLCPSVGSGGHITGGGYGTMMRKYGLGADNVVDARIVDASGRILD-REA-MGE 208 (524)
Q Consensus 131 v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~ggg~G~~~~~~G~~~d~v~~~~vv~~~G~v~~-~~~-~~~ 208 (524)
|+||||+++.+|.++|.++|+.+...+|. +.++|||.+.+|++|.+++.||.++|+|++++||++||++++ +.. +|+
T Consensus 110 v~v~aGv~l~~L~~~l~~~Gl~l~~~~g~-~~~tvGGaia~~a~G~~~~~~G~~~d~V~~~evV~~dG~v~~~s~~~~~~ 188 (481)
T 4feh_A 110 VDIDAGVNLDQLMKAALPFGLWVPVLPGT-RQVTVGGAIACDIHGKNHHSAGSFGNHVRSMDLLTADGEIRHLTPTGEDA 188 (481)
T ss_dssp EEEETTCBHHHHHHHHGGGTEECSCCCSC-SCCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEECTTSCEEEECSSSTTH
T ss_pred EEEcCCccHHHHHHHHHHcCCEEEEeCCc-CccccCCccccccCCCCcccCCCccceEeEEEEEeCCCCEEEeCCCCCCh
Confidence 99999999999999999998543333444 467899999999999999999999999999999999999997 555 789
Q ss_pred hhhhhhhccCCCcceEEEEEEEEEEecCceE
Q 043814 209 DLFWAIRGGGGGSFGIILAWKVKLVPVPATV 239 (524)
Q Consensus 209 dlf~a~rg~~~g~~GIvt~~tlk~~p~~~~~ 239 (524)
||||++|||. |+|||||+++||++|.|+..
T Consensus 189 dLf~a~rgs~-G~~GIIt~~tl~l~p~~~~~ 218 (481)
T 4feh_A 189 ELFWATVGGN-GLTGIIMRATIEMTPTSTAY 218 (481)
T ss_dssp HHHHHHTTCT-TTTCEEEEEEEECEECSCSE
T ss_pred HHHHHhhccC-CCceEEEEEEEEEEeCCccE
Confidence 9999999998 99999999999999998644
No 16
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=100.00 E-value=1.7e-32 Score=297.96 Aligned_cols=201 Identities=22% Similarity=0.243 Sum_probs=168.0
Q ss_pred CCCCceEEEecCCHHHHHHHHHHHHhCCCeEEEEeCCcCCCCCccccCCCCCeEEEEcCCCCce-EEeCCCCeEEEeCCC
Q 043814 59 SMPKPEFIFTPLNESHVRAAVICSRDLRIHLRIRSGGHDYEGLSYVSQIETPFFLLDLAKLRSI-EVDINDNTAWVQAGA 137 (524)
Q Consensus 59 ~~~~P~~vv~p~s~edv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~~~~~vvIdl~~~~~i-~~d~~~~~v~v~~G~ 137 (524)
....|.+|++|+|++||+++|++|+++++||+++|||||+.|.+.+....+++++|||++||+| ++|+++.+|+||||+
T Consensus 134 ~~~~p~~vv~P~s~eeV~~iv~~a~~~~~pv~~~GgGts~~gg~~~~~~~~g~vvidl~~mn~I~~id~~~~~v~v~aGv 213 (584)
T 2uuu_A 134 VKNAPDLIVLPHSHEEVERLVQLAHKYNVVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGI 213 (584)
T ss_dssp CCCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEESSCCCSSCTTSCCCCSSCEEEEECTTCCCEEEEETTTTEEEEETTC
T ss_pred cCCCCCEEEeCCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccCCCCCEEEEECCCCCccEEEcCCCCEEEECCCC
Confidence 4568999999999999999999999999999999999999877665311125899999999998 899999999999999
Q ss_pred CHHHHHHHHHHhCCCceEecCCCCCccccccccCCCCCCCccccCCcccceeEEEEEccCCcEEe----ccCCCchhhhh
Q 043814 138 TIGELYYRIAEKSNTQGFTAGLCPSVGSGGHITGGGYGTMMRKYGLGADNVVDARIVDASGRILD----REAMGEDLFWA 213 (524)
Q Consensus 138 ~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~ggg~G~~~~~~G~~~d~v~~~~vv~~~G~v~~----~~~~~~dlf~a 213 (524)
++.+|.++|.++|+.+...+++...++|||++++|+.|+.+.+||.++|+|++++||++||++++ +...++||+|+
T Consensus 214 ~~~~l~~~l~~~Gl~~~~~p~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~levVl~dG~i~~~~~~~~~~g~dl~~~ 293 (584)
T 2uuu_A 214 MGPELEKQLHKQGVSLGHDPDSFEFSTLGGWLATCSSGHQSDKYGDIEDMAVSFRTVTPTGTLELRNGARSGAGINYKHI 293 (584)
T ss_dssp BHHHHHHHHHHTTEECCCCCTTGGGCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEECCC-------CCCTHHH
T ss_pred cHHHHHHHHHHcCCeeCcCCCccCCeeEeeeccCCCCcccccCcCcHHHheeeEEEEeCCCCEEECCccccCCCcchhhh
Confidence 99999999999985332223334557999999999999999999999999999999999999886 34468999999
Q ss_pred hhccCCCcceEEEEEEEEEEecCceEEEEEEEecchhhHHHHHHHHH
Q 043814 214 IRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKTLEQGATKILYKWQ 260 (524)
Q Consensus 214 ~rg~~~g~~GIvt~~tlk~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (524)
++|+. |+|||||+++||++|.|+....+.+.|...+++.+++..+.
T Consensus 294 ~~Gse-GtlGIIT~~tlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~ 339 (584)
T 2uuu_A 294 ILGSE-GTLGIITEAVMKVHAVPQAVEYYGFLFPTFAHAVSALQQIR 339 (584)
T ss_dssp HTTCT-TSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHHH
T ss_pred hccCC-CCcEEEEEEEEEEEecccceEEEEEEcCCHHHHHHHHHHHH
Confidence 99998 99999999999999999977777777764444444444443
No 17
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=100.00 E-value=1.7e-31 Score=281.01 Aligned_cols=175 Identities=21% Similarity=0.257 Sum_probs=155.9
Q ss_pred ccCCCCCCCceEEEecCCHHHHHHHHHHHHhCCCeEEEEeCCcCCCCCccccCCCCCeEEEEcCCCCce-EEeCCCCeEE
Q 043814 54 RYLVPSMPKPEFIFTPLNESHVRAAVICSRDLRIHLRIRSGGHDYEGLSYVSQIETPFFLLDLAKLRSI-EVDINDNTAW 132 (524)
Q Consensus 54 r~~~~~~~~P~~vv~p~s~edv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~~~~~vvIdl~~~~~i-~~d~~~~~v~ 132 (524)
+|+..+...|.+|++|+|++||+++|++| +|++++|||||+.+.+... .++++|||++||+| ++|+++++|+
T Consensus 12 ~w~~~~~~~p~~v~~P~s~~ev~~~v~~a----~~v~~~G~G~s~~~~~~~~---~~g~vi~l~~l~~i~~~d~~~~~v~ 84 (422)
T 2vfr_A 12 NWAGNITYTAKELLRPHSLDALRALVADS----ARVRVLGSGHSFNEIAEPG---DGGVLLSLAGLPSVVDVDTAARTVR 84 (422)
T ss_dssp CSSSSCBCSCSSCBCCSSHHHHHHHHHHC----SSEEECSSCCCCSSTTCCC---TTCEEECSTTSCCCEEEETTTTEEE
T ss_pred cCCCCccCCCCEEEeCCCHHHHHHHHHhC----CCEEEEECCCCCCCCccCC---CCcEEEEhhhCCCcEEEcCCCCEEE
Confidence 58887888999999999999999999999 8999999999998877632 24899999999997 8999999999
Q ss_pred EeCCCCHHHHHHHHHHhCCCceEe-cCCCCCccccccccCCCCCCCccccCCcccceeEEEEEccCCcEEe-ccCCCchh
Q 043814 133 VQAGATIGELYYRIAEKSNTQGFT-AGLCPSVGSGGHITGGGYGTMMRKYGLGADNVVDARIVDASGRILD-REAMGEDL 210 (524)
Q Consensus 133 v~~G~~~~~l~~~l~~~g~~l~~~-~g~~~~vgvgG~~~ggg~G~~~~~~G~~~d~v~~~~vv~~~G~v~~-~~~~~~dl 210 (524)
||||+++.+|.++|.++|+. ++ .+.++.++|||++++|++|.. .+||.++|+|++++||++||++++ +..+|+
T Consensus 85 v~aG~~l~~l~~~l~~~Gl~--l~~~~~~~~~tvGG~i~~~~~G~~-~~~G~~~d~v~~~~vv~~~G~~~~~~~~~~~-- 159 (422)
T 2vfr_A 85 VGGGVRYAELARVVHARGLA--LPNMASLPHISVAGSVATGTHGSG-VGNGSLASVVREVELVTADGSTVVIARGDER-- 159 (422)
T ss_dssp EETTCBHHHHHHHHHHTTEE--CSCCCSSSCSBHHHHHHHTCCCCC-TTCCCGGGGEEEEEEECTTSCEEEEETTSTT--
T ss_pred EcCCCCHHHHHHHHHHcCCc--ccCCCCCCCeeHHHHHhcCCCCCC-cccCcHHHheEEEEEEeCCCCEEEeCCCCCC--
Confidence 99999999999999999854 44 477888999999999999976 699999999999999999999997 444555
Q ss_pred hhhhhccCCCcceEEEEEEEEEEecCceEEE
Q 043814 211 FWAIRGGGGGSFGIILAWKVKLVPVPATVTV 241 (524)
Q Consensus 211 f~a~rg~~~g~~GIvt~~tlk~~p~~~~~~~ 241 (524)
||+++|+. |+|||||+++||++|.|+....
T Consensus 160 f~~~~g~~-G~lGvit~~~l~l~p~~~~~~~ 189 (422)
T 2vfr_A 160 FGGAVTSL-GALGVVTSLTLDLEPAYEMEQH 189 (422)
T ss_dssp GGGTSSCT-TTTCEEEEEEEECEECCEEEEE
T ss_pred cceEEecC-CCCEEEEEEEEEEEecCceEEE
Confidence 99999998 8999999999999999875543
No 18
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=99.97 E-value=7.8e-31 Score=282.89 Aligned_cols=199 Identities=22% Similarity=0.290 Sum_probs=166.5
Q ss_pred CCCCceEEEecCCHHHHHHHHHHHHhCCCeEEEEeCCcCCC-CCccccCCCCCeEEEEcCCCCce-EEeCCCCeEEEeCC
Q 043814 59 SMPKPEFIFTPLNESHVRAAVICSRDLRIHLRIRSGGHDYE-GLSYVSQIETPFFLLDLAKLRSI-EVDINDNTAWVQAG 136 (524)
Q Consensus 59 ~~~~P~~vv~p~s~edv~~~v~~a~~~~~~v~~~ggGh~~~-g~~~~~~~~~~~vvIdl~~~~~i-~~d~~~~~v~v~~G 136 (524)
....|.+|++|+|++||+++|++|+++++||+++|+|||+. |.+.+.. .++++|||++||+| ++|+++.+|+||||
T Consensus 53 ~~~~p~~vv~P~s~~ev~~~v~~a~~~~~pv~~~g~G~~~~~g~~~~~~--~~gvvidl~~m~~i~~id~~~~~v~v~aG 130 (520)
T 1wvf_A 53 AAHAPSAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGYGSAAPVQ--RGQVILDLKKMNKIIKIDPEMCYALVEPG 130 (520)
T ss_dssp GGGCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTSCSS--TTCEEEECTTCCCEEEEETTTTEEEECTT
T ss_pred cCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCCCCCC--CCeEEEECCCCCceEEECCCCCEEEECCC
Confidence 34589999999999999999999999999999999999986 6544311 24899999999998 99999999999999
Q ss_pred CCHHHHHHHHHHhCCCceEecC---CCCCccccccccCCCCCCCccccCCcccceeEEEEEccCCcEEec---cCCCchh
Q 043814 137 ATIGELYYRIAEKSNTQGFTAG---LCPSVGSGGHITGGGYGTMMRKYGLGADNVVDARIVDASGRILDR---EAMGEDL 210 (524)
Q Consensus 137 ~~~~~l~~~l~~~g~~l~~~~g---~~~~vgvgG~~~ggg~G~~~~~~G~~~d~v~~~~vv~~~G~v~~~---~~~~~dl 210 (524)
+++.+|.++|.++|+. ++.+ ....+||||++++||.|.. +||.++|+|++++||++||++++. ..+++|+
T Consensus 131 v~~~~l~~~l~~~Gl~--~~~~~~p~~~~~~igG~~~~~g~g~~--~yG~~~d~v~~~evV~~dG~v~~~~~~~~~~~~l 206 (520)
T 1wvf_A 131 VTFGQMYDYIQENNLP--VMLSFSAPSAIAGPVGNTMDRGVGYT--PYGEHFMMQCGMEVVLANGDVYRTGMGGVPGSNT 206 (520)
T ss_dssp CCHHHHHHHHHHTTCS--EECCCCSSCTTCCHHHHHHTTCBCSS--TTCBGGGGEEEEEEECTTSCEEECGGGGSTTCSC
T ss_pred CCHHHHHHHHHHcCCc--ccCCCCCCCCeeeeeecccCCCcCCc--cccchhhcEeeeEEEcCCCcEEEeCCCcCCCchh
Confidence 9999999999999854 4433 3347889999988888875 899999999999999999999973 2357898
Q ss_pred hhhhhccCC---------CcceEEEEEEEEEEecCceEEEEEEEecchhhHHHHHHHHHHHH
Q 043814 211 FWAIRGGGG---------GSFGIILAWKVKLVPVPATVTVFTVSKTLEQGATKILYKWQQVA 263 (524)
Q Consensus 211 f~a~rg~~~---------g~~GIvt~~tlk~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (524)
|++.+|+.+ ++|||||+++||++|.|+....+.+.|+..+++.++++.++++.
T Consensus 207 ~~~~~~~~Gy~l~~l~~g~~lGiVt~~~l~l~p~p~~~~~~~~~f~~~~~~~~~~~~~~~~~ 268 (520)
T 1wvf_A 207 WQIFKWGYGPTLDGMFTQANYGICTKMGFWLMPKPPVFKPFEVIFEDEADIVEIVDALRPLR 268 (520)
T ss_dssp TTTCSCCSSCCCHHHHTTSSSCEEEEEEEECEECCSEEEEEEEEECCGGGHHHHHHHHHHHH
T ss_pred HhhhcCCCCcchhhhccCCceEEEEEEEEEEEecCCeEEEEEEEeCCHHHHHHHHHHHHHHH
Confidence 877777652 48999999999999999987777777765556666666666554
No 19
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=99.96 E-value=9.1e-30 Score=276.14 Aligned_cols=200 Identities=14% Similarity=0.115 Sum_probs=165.3
Q ss_pred ceeecC-CCCCchhHHhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHhCCCeEEEEeCCcCCCCCccccCC-CC
Q 043814 32 SNFYTP-NNSSFLSVLESSAQNLRYLVPSMPKPEFIFTPLNESHVRAAVICSRDLRIHLRIRSGGHDYEGLSYVSQI-ET 109 (524)
Q Consensus 32 ~~~~~p-~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~p~s~edv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~-~~ 109 (524)
..+++| +++.|+... .+|+..+...|.+|+.|+|++||+++|++|+++++|++++|+|||+.+.+...+. ..
T Consensus 10 ~~~~~p~~~~~y~~~~------~~w~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~v~~~G~G~s~~~~~l~~~~~~~ 83 (561)
T 2i0k_A 10 TPPNFPNDIALFQQAY------QNWSKEIMLDATWVCSPKTPQDVVRLANWAHEHDYKIRPRGAMAGWTPLTVEKGANVE 83 (561)
T ss_dssp CCTTCCTTSCCEEEEE------ECTTSSSEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECCCCCCCTTSSCTTCCCT
T ss_pred CceecCCCCHhHHHHH------hhhhhccCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEECCCCCcccccccCCCcCC
Confidence 456777 999999752 3588777889999999999999999999999999999999999999764432210 12
Q ss_pred CeEEEEc-CCCCceEEeC--CCCeEEEeCCCCHHHHHHHHHHhCCCceEecCCCCCccccccccCCCCCCC---------
Q 043814 110 PFFLLDL-AKLRSIEVDI--NDNTAWVQAGATIGELYYRIAEKSNTQGFTAGLCPSVGSGGHITGGGYGTM--------- 177 (524)
Q Consensus 110 ~~vvIdl-~~~~~i~~d~--~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~ggg~G~~--------- 177 (524)
++++||| ++||+|++|+ +.++|+||||+++.+|.++|.++|+.++..++. +.++|||.+.+|++|.+
T Consensus 84 ~gvvIdl~~~l~~i~vd~~~~~~~v~v~aGv~l~~L~~~l~~~Gl~l~~~~~~-~~~TvGG~i~~~~~G~~l~~gG~~~~ 162 (561)
T 2i0k_A 84 KVILADTMTHLNGITVNTGGPVATVTAGAGASIEAIVTELQKHDLGWANLPAP-GVLSIGGALAVNAHGAALPAVGQTTL 162 (561)
T ss_dssp TEEEEECTTTSCCEEEECCSSSCEEEEETTSBHHHHHHHHHHTTEECSSCCSC-TTCBHHHHHHTTCCCSCCCCTTCCCC
T ss_pred CeEEEechhhCCceEecCcCCccEEEEcCCCCHHHHHHHHHHcCCcccccCCC-CCcccCCCcccCCcccccccCCcccc
Confidence 4899999 8999999998 789999999999999999999999544333333 66889999988777765
Q ss_pred -ccccCCcccceeEEEEEccCCc---EEeccCCCchhhhhhhccCCCcceEEEEEEEEEEecCceEEE
Q 043814 178 -MRKYGLGADNVVDARIVDASGR---ILDREAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTV 241 (524)
Q Consensus 178 -~~~~G~~~d~v~~~~vv~~~G~---v~~~~~~~~dlf~a~rg~~~g~~GIvt~~tlk~~p~~~~~~~ 241 (524)
+++||.++|+|++++||++||+ +++...+++||+|+++|.| . ||||++|||++|.++....
T Consensus 163 s~~~~G~~~d~V~~~evV~~dG~~~~~~~~~~~~~dl~~a~~g~G--~-giIt~~tl~l~p~~~~~~~ 227 (561)
T 2i0k_A 163 PGHTYGSLSNLVTELTAVVWNGTTYALETYQRNDPRITPLLTNLG--R-CFLTSVTMQAGPNFRQRCQ 227 (561)
T ss_dssp TTCCSSCGGGGEEEEEEEEECSSSEEEEEEETTSGGGHHHHSCTT--S-SCEEEEEEECEECCEEEEE
T ss_pred cccccccHhheEEEEEEEeCCCCEEEeeeccCCCccHHHHHhcCC--C-EEEEEEEEEEEECCceEEE
Confidence 7789999999999999999999 6653334789999998654 3 8999999999999875443
No 20
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=99.96 E-value=6.3e-29 Score=269.88 Aligned_cols=200 Identities=16% Similarity=0.128 Sum_probs=165.0
Q ss_pred CCCCceEEEecCCHHHHHHHHHHHHhCCCeEEEEeCCcCCC-CCccc-cCCCCCeEEEEc-CCCCce-EEeCCCCeEEEe
Q 043814 59 SMPKPEFIFTPLNESHVRAAVICSRDLRIHLRIRSGGHDYE-GLSYV-SQIETPFFLLDL-AKLRSI-EVDINDNTAWVQ 134 (524)
Q Consensus 59 ~~~~P~~vv~p~s~edv~~~v~~a~~~~~~v~~~ggGh~~~-g~~~~-~~~~~~~vvIdl-~~~~~i-~~d~~~~~v~v~ 134 (524)
....|.+|++|+|++||+++|++|+++++||++||+|||+. |...+ .. ++++||| ++||+| ++|+++.+|+||
T Consensus 67 ~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~pv~~~g~Gt~~~~gg~~p~~~---~gvvidl~~~mn~il~id~~~~~v~v~ 143 (560)
T 1e8g_A 67 DYFLASAIVAPRNVADVQSIVGLANKFSFPLWPISIGRNSGYGGAAPRVS---GSVVLDMGKNMNRVLEVNVEGAYCVVE 143 (560)
T ss_dssp TSSCCSEEECCSSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTCCSST---TCEEEECTTTCCCEEEEETTTTEEEEC
T ss_pred cccCCcEEEeCCCHHHHHHHHHHHHHcCCcEEEecCCCcCCcCCCCCCcC---CEEEEEchHhcCCeEEEcCCCCEEEEe
Confidence 45689999999999999999999999999999999999986 55443 22 4899999 999998 999999999999
Q ss_pred CCCCHHHHHHHHHHhCCC--ceEecCCCCCccccccccCCCCCCCccccCCcccceeEEEEEccCCcEEec-c--CCCc-
Q 043814 135 AGATIGELYYRIAEKSNT--QGFTAGLCPSVGSGGHITGGGYGTMMRKYGLGADNVVDARIVDASGRILDR-E--AMGE- 208 (524)
Q Consensus 135 ~G~~~~~l~~~l~~~g~~--l~~~~g~~~~vgvgG~~~ggg~G~~~~~~G~~~d~v~~~~vv~~~G~v~~~-~--~~~~- 208 (524)
||+++.+|.++|.++|+. +.+.++..+..|+||+++++|.|+. +||.++|+|++++||++||++++. . ..++
T Consensus 144 aGv~~~~l~~~l~~~Gl~~~~~~~p~~~~~~tigG~~~~~g~g~~--~yG~~~d~v~~l~vVl~dG~v~~~~~~~~~~~~ 221 (560)
T 1e8g_A 144 PGVTYHDLHNYLEANNLRDKLWLDVPDLGGGSVLGNAVERGVGYT--PYGDHWMMHSGMEVVLANGELLRTGMGALPDPK 221 (560)
T ss_dssp TTCBHHHHHHHHHHTTCTTTEECCCCSSTTSBHHHHHHTTCBCSS--TTCBTGGGEEEEEEEETTSCEEECGGGGSCCCC
T ss_pred CCCCHHHHHHHHHHcCCccccCCCCCCCCccchhhhccCCCCCcc--cceeHHHheeeeEEEeCCCCEEEecCcccCccc
Confidence 999999999999999965 4433455556789999988888864 999999999999999999999972 2 1221
Q ss_pred --------------hhhhhhhcc----------CCCcceEEEEEEEEEEecCceEEEEEEEecchhhHHHHHHHHHHHH
Q 043814 209 --------------DLFWAIRGG----------GGGSFGIILAWKVKLVPVPATVTVFTVSKTLEQGATKILYKWQQVA 263 (524)
Q Consensus 209 --------------dlf~a~rg~----------~~g~~GIvt~~tlk~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (524)
+++|+++++ .+|+|||||++|||++|.|+....+.+.|+..+++.+++..++++.
T Consensus 222 ~~~~~~~~l~~~~~~~~~~~~~~g~Gy~l~~L~~~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~a~~~~~~~~~~~ 300 (560)
T 1e8g_A 222 RPETMGLKPEDQPWSKIAHLFPYGFGPYIDGLFSQSNMGIVTKIGIWLMPNPGGYQSYLITLPKDGDLKQAVDIIRPLR 300 (560)
T ss_dssp CGGGTTCCGGGSCCCTTTTTCSCCSSCCCGGGGSSSSSEEEEEEEEECEECCSCEEEEEEEECSTTHHHHHHHHHHHHH
T ss_pred ccccccchhhhhhhhcccccccccCCcchhcccccCcEEEEEEEEEEEEeCCCceEEEEEEcCCHHHHHHHHHHHHHHH
Confidence 566666543 2379999999999999999987777788875566666676666664
No 21
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=99.96 E-value=2.6e-29 Score=267.28 Aligned_cols=193 Identities=17% Similarity=0.165 Sum_probs=156.3
Q ss_pred cCCCCCchhHHhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHhCCCeEEEEeCCcCCCCCccccC-CCCCeEEE
Q 043814 36 TPNNSSFLSVLESSAQNLRYLVPSMPKPEFIFTPLNESHVRAAVICSRDLRIHLRIRSGGHDYEGLSYVSQ-IETPFFLL 114 (524)
Q Consensus 36 ~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~p~s~edv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~-~~~~~vvI 114 (524)
..+-+.|.... .+|+..+...|.+|++|+|+|||+++|++|+++++||+++|+|||+.+.....+ ..+++++|
T Consensus 9 p~~i~~y~~~~------~nWs~~~~~~P~~vv~P~s~eEV~~~Vk~A~~~~~pv~v~GgGhs~~~l~~~gG~~~~~GVvI 82 (540)
T 3js8_A 9 PAEIPLYKQSF------KNWAGDIKVDDVWTCAPRSADEVVKVANWAKDNGYKVRARGMMHNWSPLTLAAGVSCPAVVLL 82 (540)
T ss_dssp CTTSCCEEEEE------ECTTSCCEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECSCCCSSCSSCCTTCSSCSEEEE
T ss_pred Ccccchhccee------eccccccCCCccEEEEcCCHHHHHHHHHHHHHcCCeEEEEeCCCCcccccccCCCCCCCeEEE
Confidence 33456666542 258888888999999999999999999999999999999999999863222111 01258999
Q ss_pred EcC-CCCceEEeCC--CCeEEEeCCCCHHHHHHHHHHhCCCceEec-CCCCCccccccccCCCCCCC----------ccc
Q 043814 115 DLA-KLRSIEVDIN--DNTAWVQAGATIGELYYRIAEKSNTQGFTA-GLCPSVGSGGHITGGGYGTM----------MRK 180 (524)
Q Consensus 115 dl~-~~~~i~~d~~--~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~-g~~~~vgvgG~~~ggg~G~~----------~~~ 180 (524)
||+ +||+|++|++ .++|+||+|+++.+|.++|.++|+ .++. +..+.++|||++++|++|.. +++
T Consensus 83 dls~~Ln~I~vD~~~~~~tVtV~AGv~l~~L~~~L~~~GL--~l~~~~gi~~~TVGGaia~gagG~~~~~~G~~~~~g~~ 160 (540)
T 3js8_A 83 DTTRYLTAMSIDASGPVAKVTAQAGITMEALLTGLEKAGL--GVTAAPAPGDLTLGGVLAINGHGTAIPAKGERRLAGAS 160 (540)
T ss_dssp ETTTTCCCEEEECSSSSEEEEEETTSBHHHHHHHHHHTTE--ECSCCCSCSCSBHHHHHHTTCCCCBCCCTTCCCCTTCC
T ss_pred ECcCcCCCEEECCCCCccEEEEccCCCHHHHHHHHHHcCC--EEEecCCCCCeEEcccccCCCCcccccccccccccccc
Confidence 995 7999999985 579999999999999999999984 4442 33467899999999999986 689
Q ss_pred cCCcccceeEEEEEccCCc-----EEeccCCCchhhhhhhccCCCcceEEEEEEEEEEecCceE
Q 043814 181 YGLGADNVVDARIVDASGR-----ILDREAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATV 239 (524)
Q Consensus 181 ~G~~~d~v~~~~vv~~~G~-----v~~~~~~~~dlf~a~rg~~~g~~GIvt~~tlk~~p~~~~~ 239 (524)
||.++|+|++++||++||+ +++.+.+++||+ ++|+|. |. ||||++|||++|.+...
T Consensus 161 ~G~~~D~V~~levV~adG~~~~~~i~~~s~~~~DL~-a~r~G~-G~-gIVTevtlrl~P~~~l~ 221 (540)
T 3js8_A 161 YGSISNLVLSLTAVVYDKASGAYALRKFARNDPQIA-PLLAHV-GR-SLIVEATLQAAPNQRLR 221 (540)
T ss_dssp SSCGGGGEEEEEEEEEETTTTEEEEEEEETTSGGGH-HHHTCT-TS-SCEEEEEEEEEECCEEE
T ss_pred cccHHHhEEEEEEEcCCCCCceeeEEEeCCCChhHH-HHHhcC-CC-eEEEEEEEEEEECCceE
Confidence 9999999999999999998 665334689985 556665 55 69999999999988644
No 22
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=99.96 E-value=8.7e-29 Score=267.07 Aligned_cols=197 Identities=11% Similarity=0.090 Sum_probs=163.9
Q ss_pred CCCCceEEEecCCHHHHHHHHHHHHhCCCeEEEEeCCcCCCCCccccCC--CCCeEEEEcCCCCce-EEeCCCCeEEEeC
Q 043814 59 SMPKPEFIFTPLNESHVRAAVICSRDLRIHLRIRSGGHDYEGLSYVSQI--ETPFFLLDLAKLRSI-EVDINDNTAWVQA 135 (524)
Q Consensus 59 ~~~~P~~vv~p~s~edv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~--~~~~vvIdl~~~~~i-~~d~~~~~v~v~~ 135 (524)
....|.+|++|+|++||+++|++|+++++||+++|||||+.|.+.+.+. .+++++|||++||+| ++|+ +++|+|||
T Consensus 42 ~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~~v~~~GgGt~~~G~~~~~~~~~~r~gvvIdl~rmn~I~~id~-~~~v~v~a 120 (571)
T 1f0x_A 42 GQGDALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDVVIISTLRLDKLHVLGK-GEQVLAYP 120 (571)
T ss_dssp CBBCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTSCCBSCCSSCEEEEECTTCCCEEEETT-TTEEEECT
T ss_pred cCCCccEEEeeCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCccCCCcCCcCceEEEECcccCCceeECC-CCeEEEcC
Confidence 4568999999999999999999999999999999999999887766530 013899999999998 7984 57999999
Q ss_pred CCCHHHHHHHHHHhCCCceEec---CCCCCccccccccCCCCCCCccccCCccc----------------ceeEEEEEcc
Q 043814 136 GATIGELYYRIAEKSNTQGFTA---GLCPSVGSGGHITGGGYGTMMRKYGLGAD----------------NVVDARIVDA 196 (524)
Q Consensus 136 G~~~~~l~~~l~~~g~~l~~~~---g~~~~vgvgG~~~ggg~G~~~~~~G~~~d----------------~v~~~~vv~~ 196 (524)
|+++.+|.++|.++|+ .++. +.|..++|||.+++++.|..+.+||.++| +|++++||++
T Consensus 121 Gv~l~~L~~~l~~~Gl--~~p~~~g~s~~~~tvGG~ia~nagG~~~~~yG~~~d~~~~~~~~~~~~l~~~~vl~levVl~ 198 (571)
T 1f0x_A 121 GTTLYSLEKALKPLGR--EPHSVIGSSCIGASVIGGICNNSGGSLVQRGPAYTEMSLFARINEDGKLTLVNHLGIDLGET 198 (571)
T ss_dssp TCBHHHHHHHHGGGTE--ECSCCCGGGGGTCBHHHHHHTTCCCSCTTSCSSCCSCEEEEEECTTSCEEEEECSSBCCCSS
T ss_pred CcCHHHHHHHHHhcCc--cCCcCCCccCCCceecccccCCCCcccccCCCchhhhhhhheeccCCceEEEEeeeEEEEcC
Confidence 9999999999999984 3432 34445689999999999999999999999 9999999999
Q ss_pred CCcEEe-c-----------------cCCCc-----------------hhhhhh--hccCCCcceEEEEEEEEEEecCceE
Q 043814 197 SGRILD-R-----------------EAMGE-----------------DLFWAI--RGGGGGSFGIILAWKVKLVPVPATV 239 (524)
Q Consensus 197 ~G~v~~-~-----------------~~~~~-----------------dlf~a~--rg~~~g~~GIvt~~tlk~~p~~~~~ 239 (524)
||++++ . ...++ ||+|++ +||. |+||| |+++||++|.|+..
T Consensus 199 dG~i~~~~~~~~~~~~~~~~~~~~k~~~Gy~~~~~~~d~~~p~~~~~Dl~~l~~a~Gse-GtlGV-t~~tl~l~p~p~~~ 276 (571)
T 1f0x_A 199 PEQILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGCA-GKLAV-FAVRLDTFEAEKNQ 276 (571)
T ss_dssp HHHHHHHHHTTCCCGGGBCCCSCCSSCTTHHHHHHCTTCSSCSCCTTCGGGCCSSTTCT-TSSEE-EEEEEECEECCSSC
T ss_pred CCcEEEecCccccccchhhhcccccccCCcccccccccccccccccccHHHHHHhcCCC-CceeE-EEEEEEEEecCCeE
Confidence 999985 2 11223 998888 9988 99999 99999999999877
Q ss_pred EEEEEEecchhhHHHHHHHHH
Q 043814 240 TVFTVSKTLEQGATKILYKWQ 260 (524)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~ 260 (524)
..+.+.++..+++.+++..+.
T Consensus 277 ~~~~~~~~~~~~a~~~~~~~~ 297 (571)
T 1f0x_A 277 QVFYIGTNQPEVLTEIRRHIL 297 (571)
T ss_dssp EEEEEEESCHHHHHHHHHHHH
T ss_pred EEEEEEeCCHHHHHHHHHHHH
Confidence 777777765455555555544
No 23
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.93 E-value=5.7e-26 Score=228.73 Aligned_cols=165 Identities=19% Similarity=0.185 Sum_probs=137.3
Q ss_pred CCCCceEEEecCCHHHHHHHHHHHHhCCCeEEEEeCCcCCCCCccccCCCCCeEEEEcCCCCceEEeCCCCeEEEeCCCC
Q 043814 59 SMPKPEFIFTPLNESHVRAAVICSRDLRIHLRIRSGGHDYEGLSYVSQIETPFFLLDLAKLRSIEVDINDNTAWVQAGAT 138 (524)
Q Consensus 59 ~~~~P~~vv~p~s~edv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~~~~~vvIdl~~~~~i~~d~~~~~v~v~~G~~ 138 (524)
+...|.++++|+|++||+++|++|+++++|+.++|+|||+.+.+.+.+ +++|||++|++|++| +.+++|+||++
T Consensus 51 igg~p~~vv~P~s~eev~~~v~~a~~~~~pv~v~GgGsnl~~~~~~~~----gvvI~l~~~~~I~~d--~~~v~v~aG~~ 124 (322)
T 3tx1_A 51 TGGAADVFVMPKTIEEAQEVVAYCHQNKIPLTILGNGSNLIIKDGGIR----GVILHLDLLQTIERN--NTQIVAMSGAK 124 (322)
T ss_dssp CCCEEEEEEECSSHHHHHHHHHHHHHTTCCEEEESCCTTEEECTTCEE----EEEEECTTCCCEEEE--TTEEEEETTSB
T ss_pred cCceeeEEEEeCCHHHHHHHHHHHHHcCCcEEEECCccCCCcCCCCCC----eEEEECCCCCcEEEC--CCEEEEecCcC
Confidence 456899999999999999999999999999999999999876554334 899999999999886 45999999999
Q ss_pred HHHHHHHHHHhCC-CceEecCCCCCccccccccCCCCCCCccccCCcccceeEEEEEccCCcEEeccCCCchhhhhhhcc
Q 043814 139 IGELYYRIAEKSN-TQGFTAGLCPSVGSGGHITGGGYGTMMRKYGLGADNVVDARIVDASGRILDREAMGEDLFWAIRGG 217 (524)
Q Consensus 139 ~~~l~~~l~~~g~-~l~~~~g~~~~vgvgG~~~ggg~G~~~~~~G~~~d~v~~~~vv~~~G~v~~~~~~~~dlf~a~rg~ 217 (524)
|.+|.+++.++|+ ++++..|.+++||....+.+||+| |.++|+|++++||++||++++.. ++|++|+||++
T Consensus 125 ~~~l~~~l~~~Gl~Gle~~~giPgTVGGav~~NaGgyG------g~~~d~v~~vevV~~~G~i~~~~--~~~~~~~yR~s 196 (322)
T 3tx1_A 125 LIDTAKFALNESLSGLEFACGIPGSIGGALHMNAGAYG------GEISDVLEAATVLTQTGELKKLK--RSELKAAYRFS 196 (322)
T ss_dssp HHHHHHHHHHTTEESCGGGTTCCSBHHHHHHHTCEETT------EEHHHHEEEEEEECTTSCEEEEE--GGGCC--CC-C
T ss_pred HHHHHHHHHHcCCcccccCCCCcchhHHHHHhCccCcc------cchHhhEEEEEEEcCCCCEEEec--hHHcCcchhhc
Confidence 9999999999997 566788888776544444455554 78999999999999999999733 36999999987
Q ss_pred CCC-cceEEEEEEEEEEecCc
Q 043814 218 GGG-SFGIILAWKVKLVPVPA 237 (524)
Q Consensus 218 ~~g-~~GIvt~~tlk~~p~~~ 237 (524)
..+ .+||||+++||++|.|+
T Consensus 197 ~~g~~~~IIt~~tl~L~p~~~ 217 (322)
T 3tx1_A 197 TIAEKNYIVLDATFSLALEEK 217 (322)
T ss_dssp TTTGGGCEEEEEEEECEECCH
T ss_pred ccCCCCEEEEEEEEEEEeCCH
Confidence 543 57899999999999874
No 24
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.91 E-value=1.6e-24 Score=220.46 Aligned_cols=165 Identities=13% Similarity=0.008 Sum_probs=140.4
Q ss_pred CCCCceEEEecCCHHHHHHHHHHHHhCCCeEEEEeCCcCCCCCccccCCCCCeEEEEcCCCCceEEeC--CCCeEEEeCC
Q 043814 59 SMPKPEFIFTPLNESHVRAAVICSRDLRIHLRIRSGGHDYEGLSYVSQIETPFFLLDLAKLRSIEVDI--NDNTAWVQAG 136 (524)
Q Consensus 59 ~~~~P~~vv~p~s~edv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~~~~~vvIdl~~~~~i~~d~--~~~~v~v~~G 136 (524)
+...|.++++|+|++||+++|++|+++++|+.++|+|||..+.+. .+ ++||+++ |++|+++. +..+++|+||
T Consensus 27 igg~a~~vv~p~s~eel~~~v~~a~~~~ipv~vlGgGSNll~~d~-~~----GvVI~l~-~~~i~v~~~~~~~~v~v~AG 100 (357)
T 3i99_A 27 IEQLAAQLVVAESIDDLKALYCSAEWASLPKLIIGKGSNMLFTCH-YT----GMIVVNR-LNGIEHQQDDDYHRLHVAGG 100 (357)
T ss_dssp CSCEEEEEEEECSHHHHHHHHSSSTTTTSCEEEESSCTTEEECSC-EE----EEEEEEC-CCCEEEEECSSEEEEEEETT
T ss_pred CCccceEEEEECCHHHHHHHHHHHHHcCCCEEEECCCcCcccCCC-CC----eEEEEcC-CCceEEeccCCceEEEEeCC
Confidence 445889999999999999999999999999999999999876655 44 8999998 99998754 4568999999
Q ss_pred CCHHHHHHHHHHhCCCceEecCCCCCccccccccCCCCCCCccccCC-cccceeEEEEEcc-CCcEEeccCCCchhhhhh
Q 043814 137 ATIGELYYRIAEKSNTQGFTAGLCPSVGSGGHITGGGYGTMMRKYGL-GADNVVDARIVDA-SGRILDREAMGEDLFWAI 214 (524)
Q Consensus 137 ~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~ggg~G~~~~~~G~-~~d~v~~~~vv~~-~G~v~~~~~~~~dlf~a~ 214 (524)
++|.+|.+++.++|+ .|.+..+|+.| ..||+.+++.+.||. ++|+|+++++|++ ||++++.. +.|++|+|
T Consensus 101 ~~~~~l~~~a~~~Gl-----~GlE~l~gIPG-tVGGav~~NaGaYG~e~~d~v~~vevv~~~~G~i~~~~--~~dl~f~Y 172 (357)
T 3i99_A 101 EDWPSLVSWCVEQGI-----GGLENLALIPG-CAGSAPIQNIGAYGVEFKDVCDYVEYLCLETGTVKRLT--MEECQFGY 172 (357)
T ss_dssp SBHHHHHHHHHHTTC-----TTCGGGTTCCS-BGGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEE--TGGGCCBT
T ss_pred CcHHHHHHHHHHcCC-----cCccccCCCCc-hhHHHHHhchhhhhhhHHhhEeEEEEEECCCCcEEEEe--HHHcCccc
Confidence 999999999999996 24444444544 457788899999997 8999999999999 99999743 36999999
Q ss_pred hccCC----CcceEEEEEEEEEEecCc
Q 043814 215 RGGGG----GSFGIILAWKVKLVPVPA 237 (524)
Q Consensus 215 rg~~~----g~~GIvt~~tlk~~p~~~ 237 (524)
|++.. +++||||+++||++|.+.
T Consensus 173 R~s~~~~~~g~~gIIt~v~f~L~p~~~ 199 (357)
T 3i99_A 173 RDSIFKHQLYQKAVVTAVGLKFAKAWQ 199 (357)
T ss_dssp TBCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred ccccCCCccCCCEEEEEEEEEEEeCCc
Confidence 98853 379999999999999764
No 25
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.91 E-value=7e-25 Score=222.13 Aligned_cols=160 Identities=20% Similarity=0.206 Sum_probs=134.6
Q ss_pred CCCCceEEEecCCHHHHHHHHHHHHhCCCeEEEEeCCcCCCCCccccCCCCCeEEEEcCCCCceEEeCCCCeEEEeCCCC
Q 043814 59 SMPKPEFIFTPLNESHVRAAVICSRDLRIHLRIRSGGHDYEGLSYVSQIETPFFLLDLAKLRSIEVDINDNTAWVQAGAT 138 (524)
Q Consensus 59 ~~~~P~~vv~p~s~edv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~~~~~vvIdl~~~~~i~~d~~~~~v~v~~G~~ 138 (524)
+...|.++++|+|++||+++|++|+++++|++++|||||+.+.+.+.+ +++|||++||+|++| ..+++||||++
T Consensus 45 ~~~~p~~vv~P~s~eev~~~l~~a~~~~~pv~~~GgGtnl~~~~~~~~----gvvI~l~~m~~i~id--~~~v~v~aGv~ 118 (326)
T 1hsk_A 45 TGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREGGIR----GIVISLLSLDHIEVS--DDAIIAGSGAA 118 (326)
T ss_dssp CCCEEEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCSSEEECTTCEE----EEEEECTTCCCEEEE--TTEEEEETTSB
T ss_pred cCCcceEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCccccCCCCCC----eEEEEeCCCCceEEc--CCEEEEeCCCc
Confidence 456899999999999999999999999999999999999876654444 899999999999887 36999999999
Q ss_pred HHHHHHHHHHhCC-CceEecCCCCCccccccccCCCCCCCccccC-CcccceeEEEEEccCCcEEeccCCCchhhhhhhc
Q 043814 139 IGELYYRIAEKSN-TQGFTAGLCPSVGSGGHITGGGYGTMMRKYG-LGADNVVDARIVDASGRILDREAMGEDLFWAIRG 216 (524)
Q Consensus 139 ~~~l~~~l~~~g~-~l~~~~g~~~~vgvgG~~~ggg~G~~~~~~G-~~~d~v~~~~vv~~~G~v~~~~~~~~dlf~a~rg 216 (524)
+.+|.+++.++|+ ++++..+.++ +|||.+..++.| || .++|+|++++||++||++++... .|++|++|.
T Consensus 119 ~~~l~~~l~~~Gl~gLe~~~~~Pg--tvGG~i~~nagg-----yG~~~~d~v~~v~vv~~~G~i~~~~~--~~~~~gyr~ 189 (326)
T 1hsk_A 119 IIDVSRVARDYALTGLEFACGIPG--SIGGAVYMNAGA-----YGGEVKDCIDYALCVNEQGSLIKLTT--KELELDYRN 189 (326)
T ss_dssp HHHHHHHHHHTTEESCGGGTTCCS--BHHHHHHHTCEE-----TTEEHHHHEEEEEEECTTSCEEEEET--TTTTCBTTB
T ss_pred HHHHHHHHHHCCCccccccCCCcc--hhhHHHhccccc-----CchhhhhhEEEEEEEeCCCCEEEECh--HHcCCCccc
Confidence 9999999999986 4445566655 466766654433 78 99999999999999999997332 388999997
Q ss_pred cC---CCcceEEEEEEEEEEec
Q 043814 217 GG---GGSFGIILAWKVKLVPV 235 (524)
Q Consensus 217 ~~---~g~~GIvt~~tlk~~p~ 235 (524)
+. .| ||||+++||++|.
T Consensus 190 ~~l~s~g--gIIt~~~l~l~p~ 209 (326)
T 1hsk_A 190 SIIQKEH--LVVLEAAFTLAPG 209 (326)
T ss_dssp CHHHHTT--CEEEEEEEECEEC
T ss_pred cccCCCC--EEEEEEEEEEEcC
Confidence 42 14 9999999999997
No 26
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.89 E-value=7.3e-23 Score=207.59 Aligned_cols=164 Identities=16% Similarity=0.037 Sum_probs=138.1
Q ss_pred CCCceEEEecCCHHHHHHHHHHHHhCCCeEEEEeCCcCCCCCccccCCCCCeEEEEcCCCCceE-EeCCC-CeEEEeCCC
Q 043814 60 MPKPEFIFTPLNESHVRAAVICSRDLRIHLRIRSGGHDYEGLSYVSQIETPFFLLDLAKLRSIE-VDIND-NTAWVQAGA 137 (524)
Q Consensus 60 ~~~P~~vv~p~s~edv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~~~~~vvIdl~~~~~i~-~d~~~-~~v~v~~G~ 137 (524)
...|.++++|+|++||+++|++|+++++|+.++|||||+.+.+. .+ ++||+|+ |++|. ++.++ .+++|+||+
T Consensus 12 gg~a~~~v~p~s~eel~~~l~~a~~~~~pv~vlGgGSnll~~d~-~~----GvVI~l~-~~~i~~i~~~~~~~v~vgAG~ 85 (340)
T 1uxy_A 12 DHNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLED-YR----GTVIINR-IKGIEIHDEPDAWYLHVGAGE 85 (340)
T ss_dssp CCBEEEEEEESSHHHHHHHHHHHHHTTCCEEEESSCTTEEECSC-EE----EEEEEEC-CCCEEEEECSSEEEEEEETTS
T ss_pred CccccEEEEeCCHHHHHHHHHHHHHcCCCEEEECCCcCCcccCC-CC----eEEEEcc-CCCcEEEecCCCeEEEEecCC
Confidence 35799999999999999999999999999999999999876653 44 8999996 99985 56665 689999999
Q ss_pred CHHHHHHHHHHhCCCceEecCCCCCccccccccCCCCCCCccccCC-cccceeEEEEEcc-CCcEEeccCCCchhhhhhh
Q 043814 138 TIGELYYRIAEKSNTQGFTAGLCPSVGSGGHITGGGYGTMMRKYGL-GADNVVDARIVDA-SGRILDREAMGEDLFWAIR 215 (524)
Q Consensus 138 ~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~ggg~G~~~~~~G~-~~d~v~~~~vv~~-~G~v~~~~~~~~dlf~a~r 215 (524)
+|.+|.+++.++|+ .|.+..+|+.| ..||+..++.+.||. ++|+|++++||++ +|++++.. +.|++|+||
T Consensus 86 ~~~~l~~~~~~~Gl-----~Gle~~~gIPG-tVGGa~~~NaGayG~ei~d~v~~v~vv~~~~G~v~~~~--~~d~~~gYR 157 (340)
T 1uxy_A 86 NWHRLVKYTLQEGM-----PGLENLALIPG-CVGSSPIQNIGAYGVELQRVCAYVDSVELATGKQVRLT--AKECRFGYR 157 (340)
T ss_dssp BHHHHHHHHHHTTC-----CSCGGGTTCCS-BGGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEE--TGGGTCBTT
T ss_pred CHHHHHHHHHHCCC-----CccccccCCcc-chhHHHHhccccchhhHHhheeEEEEEECCCCcEEEEe--HHHhccccC
Confidence 99999999999996 34444455554 457888888999995 8999999999996 99998733 369999999
Q ss_pred ccCC----CcceEEEEEEEEEEecCc
Q 043814 216 GGGG----GSFGIILAWKVKLVPVPA 237 (524)
Q Consensus 216 g~~~----g~~GIvt~~tlk~~p~~~ 237 (524)
++.. +++||||+++||+.|.+.
T Consensus 158 ~s~~~~~~~~~gIVt~v~~~L~~~~~ 183 (340)
T 1uxy_A 158 DSIFKHEYQDRFAIVAVGLRLPKEWQ 183 (340)
T ss_dssp BCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred cCccCCcCCCCEEEEEEEEEEEcCCC
Confidence 8742 369999999999999763
No 27
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.85 E-value=7.3e-22 Score=193.45 Aligned_cols=152 Identities=18% Similarity=0.163 Sum_probs=126.8
Q ss_pred CCceEEEecCCHHHHHHHHHHHHhCCCeEEEEeCCcCCCCCccccCCCCCeEEEEcCCCCceEEeCCCCeEEEeCCCCHH
Q 043814 61 PKPEFIFTPLNESHVRAAVICSRDLRIHLRIRSGGHDYEGLSYVSQIETPFFLLDLAKLRSIEVDINDNTAWVQAGATIG 140 (524)
Q Consensus 61 ~~P~~vv~p~s~edv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~~~~~vvIdl~~~~~i~~d~~~~~v~v~~G~~~~ 140 (524)
..|. +++|+|++||+++| ++|+.++|+|||+.+.+.+.+ +++||++++|++|++|. +|+||+++.
T Consensus 21 g~a~-vv~p~s~edv~~~v------~ipv~v~GgGsnll~~d~~~~---~GvVI~l~~~~~I~vd~-----~v~aG~~~~ 85 (268)
T 2gqt_A 21 GPAE-LWTVETREELKRAT------EAPYRVLGNGSNLLVLDEGVP---ERVIRLAGEFQTYDLKG-----WVGAGTLLP 85 (268)
T ss_dssp CEEE-EEEECSHHHHHHHT------TSCEEECSSSSSEEECTTCCS---SEEEEECGGGGCBCTTS-----EEETTSBHH
T ss_pred cceE-EEEeCCHHHHHHHh------CCCeEEcCCCcCceecCCCcC---CeEEEEcCCCCCcEEcC-----EEECCCCHH
Confidence 4566 99999999999999 899999999999887665443 48999999999998652 999999999
Q ss_pred HHHHHHHHhCCCceEecCCCCCccccccccCCCCCCCccccC-CcccceeEEEEEccCCcEEeccCCCchhhhhhhccCC
Q 043814 141 ELYYRIAEKSNTQGFTAGLCPSVGSGGHITGGGYGTMMRKYG-LGADNVVDARIVDASGRILDREAMGEDLFWAIRGGGG 219 (524)
Q Consensus 141 ~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~ggg~G~~~~~~G-~~~d~v~~~~vv~~~G~v~~~~~~~~dlf~a~rg~~~ 219 (524)
+|.+++.++|+ .|.+..+++.| ..||+..++.+.|| .++|+|++++|| +||++++.. +.|++|+||++..
T Consensus 86 ~l~~~~~~~Gl-----~Gle~~~giPG-tvGGav~~NaGayG~e~~d~v~~v~vv-~~G~v~~~~--~~~l~~~YR~s~~ 156 (268)
T 2gqt_A 86 LLVQEAARAGL-----SGLEGLLGIPA-QVGGAVKMNAGTRFGEMADALEAVEVF-HDGAFHVYC--PEELGFGYRKSHL 156 (268)
T ss_dssp HHHHHHHHTTE-----ESCGGGTTCCC-BHHHHHHTTCEETTEEGGGGEEEEEEE-ETTEEEEEC--GGGSCCBTTBCCC
T ss_pred HHHHHHHHcCC-----cCCccccCccc-hhHHHHHhccccCchhHHhheeEEEEE-CCCcEEEEc--hHHcccccCCCCc
Confidence 99999999984 25555566665 56778888888999 689999999999 999999743 3699999998863
Q ss_pred CcceEEEEEEEEEEecC
Q 043814 220 GSFGIILAWKVKLVPVP 236 (524)
Q Consensus 220 g~~GIvt~~tlk~~p~~ 236 (524)
..-||||+++||++|.+
T Consensus 157 ~~~gIVt~~~~~L~~~~ 173 (268)
T 2gqt_A 157 PPGGIVTRVRLKLKERP 173 (268)
T ss_dssp STTCEEEEEEECCEECC
T ss_pred CCCceEEEEEEEEEeCC
Confidence 22259999999999974
No 28
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.78 E-value=2.5e-19 Score=170.54 Aligned_cols=118 Identities=22% Similarity=0.255 Sum_probs=99.6
Q ss_pred eEEeCCCCeEEEeCCCCHHHHHHHHHHhCCCceEecCCCCCccccccccCCCCCCCccccCCcccceeEEEEEccCCcEE
Q 043814 122 IEVDINDNTAWVQAGATIGELYYRIAEKSNTQGFTAGLCPSVGSGGHITGGGYGTMMRKYGLGADNVVDARIVDASGRIL 201 (524)
Q Consensus 122 i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~ggg~G~~~~~~G~~~d~v~~~~vv~~~G~v~ 201 (524)
|++|+++.+|+|++|+++.+|+++|.++|+.+...+|+++. +|||++.+|++| .+||.. |+|++++||++||+++
T Consensus 1 l~vd~~~~~v~V~aGv~l~~L~~~l~~~Gl~~~~~Pg~~~~-tVGG~v~~nagG---~~yG~~-D~V~~vevV~~dG~i~ 75 (219)
T 2yvs_A 1 MEVHAADQYLVAPGEADLLEVHARLAGTGLFPPFPPVELPG-GVGGLVARGGFA---QTFFFP-AEVLGLTFRTPKGRRV 75 (219)
T ss_dssp CEEETTTTEEEEETTCCHHHHHHHHTTTTEECSSCSEECTT-HHHHHHHTTCSS---BSSCGG-GGEEEEEEECTTSCEE
T ss_pred CeEcCCCCEEEEcCCCcHHHHHHHHHHcCCEEeccCCCCCC-chhheeccCccc---ccCCCc-cEEEEEEEEeCCCCEE
Confidence 47899999999999999999999999998533222355565 999999999988 899999 9999999999999998
Q ss_pred e-cc-----CCCchhhhhhhccCCCcceEEEEEEEEEEecCceEEEEEEE
Q 043814 202 D-RE-----AMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVS 245 (524)
Q Consensus 202 ~-~~-----~~~~dlf~a~rg~~~g~~GIvt~~tlk~~p~~~~~~~~~~~ 245 (524)
+ +. ..++||||+++|++ |+|||||+++||++|.++....+.+.
T Consensus 76 ~~~~~~~kn~~gydl~~~~~Gs~-G~lGIVt~~tlrl~p~~~~~~~~~~~ 124 (219)
T 2yvs_A 76 RAGGVVVKNVQGYDLVRLFVGSF-GLLGRAEEVVLRLRPGRAQAFLRRPF 124 (219)
T ss_dssp EEECSSCSSSSCSCHHHHHTTCT-TTTCEEEEEEEECEECSEEEEEEEEC
T ss_pred EECCccccCCCCcchHHHhccCC-CceEEEEEEEEEEEECCcccEEEEEe
Confidence 6 22 24589999999987 89999999999999998866554443
No 29
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=98.22 E-value=2.2e-06 Score=84.77 Aligned_cols=154 Identities=16% Similarity=0.133 Sum_probs=101.4
Q ss_pred CceEEEecCCHHHHHHHHHHHHhCCCeEEEEeCCcCCCCC--ccccCCCCCeEEEEcCC---CCceEEeCCCCeEEEeCC
Q 043814 62 KPEFIFTPLNESHVRAAVICSRDLRIHLRIRSGGHDYEGL--SYVSQIETPFFLLDLAK---LRSIEVDINDNTAWVQAG 136 (524)
Q Consensus 62 ~P~~vv~p~s~edv~~~v~~a~~~~~~v~~~ggGh~~~g~--~~~~~~~~~~vvIdl~~---~~~i~~d~~~~~v~v~~G 136 (524)
.|..++.|+|.+|+.++++.. +.+..+.|||++.... .... ..+++||+++ |+.|+.+ ++.+++|+|
T Consensus 4 ~~~~~~~P~s~~ea~~ll~~~---~~~~~ilaGGT~ll~~~~~~~~---~~~~lIdl~~i~eL~~i~~~--~~~l~iGA~ 75 (287)
T 1ffv_C 4 PRFEYHAPKSVGEAVALLGQL---GSDAKLLAGGHSLLPMMKLRFA---QPEHLIDINRIPELRGIREE--GSTVVIGAM 75 (287)
T ss_dssp CCCEEECCSSHHHHHHHHHHH---GGGEEEESSCTTHHHHHHTTSC---CCSEEEECTTCGGGCCEEEE--TTEEEEETT
T ss_pred CcceEECCCCHHHHHHHHHhc---CCCCEEEECchHHHHHHhcCCC---CCCEEEECCCChhhcceEec--CCEEEEccC
Confidence 456789999999999999763 3579999999996431 1111 1369999984 6777764 457999999
Q ss_pred CCHHHHHHH-HHHhCC-CceE--e-cCCC---CCccccccccCCCCCCCccccCCccccee-------EEEEEccCCcEE
Q 043814 137 ATIGELYYR-IAEKSN-TQGF--T-AGLC---PSVGSGGHITGGGYGTMMRKYGLGADNVV-------DARIVDASGRIL 201 (524)
Q Consensus 137 ~~~~~l~~~-l~~~g~-~l~~--~-~g~~---~~vgvgG~~~ggg~G~~~~~~G~~~d~v~-------~~~vv~~~G~v~ 201 (524)
+++.+|.+. +.++++ +|.. . .+.. +..++||.+..+.. .+|.+. .+++..++|. .
T Consensus 76 ~tl~~l~~~~~~~~~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~~---------~~D~~~~l~Al~A~v~~~~~~G~-r 145 (287)
T 1ffv_C 76 TVENDLISSPIVQARLPLLAEAAKLIADPQVRNRGTIGGDIAHGDP---------GNDHPALSIAVEAHFVLEGPNGR-R 145 (287)
T ss_dssp CBHHHHHHCHHHHHHCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCT---------TCSHHHHHHHTTCEEEEEETTEE-E
T ss_pred CcHHHHhhChHHHHHhHHHHHHHHHhCCHHHhcceechhhhccCCC---------cHHHHHHHHHcCcEEEEEcCCce-E
Confidence 999999963 334333 2221 0 1222 13578888877632 345543 6888999993 3
Q ss_pred eccCCCchhhhhhhccCCCcceEEEEEEEEEEec
Q 043814 202 DREAMGEDLFWAIRGGGGGSFGIILAWKVKLVPV 235 (524)
Q Consensus 202 ~~~~~~~dlf~a~rg~~~g~~GIvt~~tlk~~p~ 235 (524)
+-+ -.|+|+++|-.....=.|||+++|.+.+.
T Consensus 146 ~i~--~~df~~g~~~t~l~~~eii~~i~ip~~~~ 177 (287)
T 1ffv_C 146 TVP--ADGFFLGTYMTLLEENEVMVEIRVPAFAQ 177 (287)
T ss_dssp EEE--STTTEEETTEESCCTTCEEEEEEEECCCT
T ss_pred EEE--HHHHhcCcccccCCCCCEEEEEEecCCCC
Confidence 322 24888888733212225999999987653
No 30
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=97.52 E-value=0.00014 Score=71.86 Aligned_cols=154 Identities=19% Similarity=0.117 Sum_probs=95.7
Q ss_pred CceEEEecCCHHHHHHHHHHHHhCCCeEEEEeCCcCCCCC-ccccCCCCCeEEEEcCC---CCceEEeCCCCeEEEeCCC
Q 043814 62 KPEFIFTPLNESHVRAAVICSRDLRIHLRIRSGGHDYEGL-SYVSQIETPFFLLDLAK---LRSIEVDINDNTAWVQAGA 137 (524)
Q Consensus 62 ~P~~vv~p~s~edv~~~v~~a~~~~~~v~~~ggGh~~~g~-~~~~~~~~~~vvIdl~~---~~~i~~d~~~~~v~v~~G~ 137 (524)
.|..++.|+|.+|+.++++.. +-+..+.+|||+.... -.... ...++||+++ |+.|+.+ ++.+++|+++
T Consensus 4 ~~~~~~~P~sl~ea~~ll~~~---~~~a~~laGGT~l~~~~k~~~~--~~~~lIdl~~i~eL~~I~~~--~~~l~IGA~~ 76 (288)
T 1n62_C 4 GSFDYHRPKSIADAVALLTKL---GEDARPLAGGHSLIPIMKTRLA--TPEHLVDLRDIGDLVGIREE--GTDVVIGAMT 76 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHHH---GGGEEEESSCTTHHHHHHTTSC--CCSEEEECTTCGGGSCEEEE--TTEEEEETTC
T ss_pred CceEEECcCCHHHHHHHHHhc---CCCCEEEECchHHHHHHhcCCC--CCCEEEECCCChhhcceEec--CCEEEEccCC
Confidence 456689999999999988643 3468999999995321 11101 2369999986 5667654 5579999999
Q ss_pred CHHHHHH--HHHHhCCCceEecCCCC------CccccccccCCCCCCCccccCCccccee-------EEEEEccCCcEEe
Q 043814 138 TIGELYY--RIAEKSNTQGFTAGLCP------SVGSGGHITGGGYGTMMRKYGLGADNVV-------DARIVDASGRILD 202 (524)
Q Consensus 138 ~~~~l~~--~l~~~g~~l~~~~g~~~------~vgvgG~~~ggg~G~~~~~~G~~~d~v~-------~~~vv~~~G~v~~ 202 (524)
++.+|.+ .+.+.--.|.-...... ..++||.+..+. ..+|.+. .+++..++|+...
T Consensus 77 t~~~l~~~~~~~~~~p~L~~a~~~ia~~qiRN~gTiGGnl~~a~---------p~sD~~~~L~Al~A~v~l~~~~G~r~v 147 (288)
T 1n62_C 77 TQHALIGSDFLAAKLPIIRETSLLIADPQIRYMGTIGGNAANGD---------PGNDMPALMQCLGAAYELTGPEGARIV 147 (288)
T ss_dssp BHHHHHHCHHHHHHCHHHHHHHTTSSCHHHHHHCBHHHHHHSCC---------TTCSHHHHHHHHTCEEEEEETTEEEEE
T ss_pred cHHHHhcChHHHHHHHHHHHHHHHhCCHHHHccccccchhccCC---------CchHHHHHHHHhCcEEEEEeCCccEEE
Confidence 9999995 44442101211111112 237889887762 2456554 6677788884222
Q ss_pred ccCCCchhhhhhhccCCCcceEEEEEEEEEEe
Q 043814 203 REAMGEDLFWAIRGGGGGSFGIILAWKVKLVP 234 (524)
Q Consensus 203 ~~~~~~dlf~a~rg~~~g~~GIvt~~tlk~~p 234 (524)
+ -.|+|.+++-..-..=-|||++.|...+
T Consensus 148 -~--~~df~~g~~~t~l~~~eil~~i~ip~~~ 176 (288)
T 1n62_C 148 -A--ARDYYQGAYFTAIEPGELLTAIRIPVPP 176 (288)
T ss_dssp -E--HHHHEEETTEESCCTTCEEEEEEEECCC
T ss_pred -E--HHHHhcCcccccCCCCCEEEEEEeCCCC
Confidence 1 1377766642111223599999987654
No 31
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=97.24 E-value=0.0003 Score=73.76 Aligned_cols=153 Identities=17% Similarity=0.115 Sum_probs=99.0
Q ss_pred EEEecCCHHHHHHHHHHHHhCCCeEEEEeCCcCCCCCccccCCCCCeEEEEcCC---CCceEEeCCCCeEEEeCCCCHHH
Q 043814 65 FIFTPLNESHVRAAVICSRDLRIHLRIRSGGHDYEGLSYVSQIETPFFLLDLAK---LRSIEVDINDNTAWVQAGATIGE 141 (524)
Q Consensus 65 ~vv~p~s~edv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~~~~~vvIdl~~---~~~i~~d~~~~~v~v~~G~~~~~ 141 (524)
.++.|+|.+|+.++++... +..+.+||++....- ..+.....++||+++ |+.|+.+ ++.+++|+|+++.+
T Consensus 179 ~y~~P~sl~ea~~ll~~~~----~a~ilaGGT~L~~~~-k~~~~~~~~lIdl~~i~eL~~I~~~--~~~l~IGA~vtl~~ 251 (462)
T 2w3s_A 179 PAFLPETSDALADWYLAHP----EATLIAGGTDVSLWV-TKALRDLPEVAFLSHCKDLAQIRET--PDGYGIGAGVTIAA 251 (462)
T ss_dssp CCBCCSSHHHHHHHHHHCT----TCEEESSCTTTTHHH-HTSCCCCCSEEECTTCGGGSCEEEE--TTEEEEETTCBHHH
T ss_pred EEEecCCHHHHHHHHhhCC----CCEEEeCCchhhhhh-hccCCCCCEEEEcCCChhhCcEEEc--CCEEEEccCCcHHH
Confidence 4678999999999887632 578899999975320 010001368999988 6778765 44699999999999
Q ss_pred HHHHHHHhCCC-c----eEecCC--CCCccccccccCCCCCCCccccCCccccee----EEEEEccCCcEEeccCCCchh
Q 043814 142 LYYRIAEKSNT-Q----GFTAGL--CPSVGSGGHITGGGYGTMMRKYGLGADNVV----DARIVDASGRILDREAMGEDL 210 (524)
Q Consensus 142 l~~~l~~~g~~-l----~~~~g~--~~~vgvgG~~~ggg~G~~~~~~G~~~d~v~----~~~vv~~~G~v~~~~~~~~dl 210 (524)
|.+.+ ++.+. | ....+. -+..+|||.+..+.++ +....-++ .+++..++|+ .+-+ -.|+
T Consensus 252 l~~~l-~~~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~sp~------sD~~~~L~ALdA~v~l~~~~G~-R~vp--~~dF 321 (462)
T 2w3s_A 252 LRAFA-EGPHPALAGLLRRFASEQVRQVATIGGNIANGSPI------GDGPPALIAMGASLTLRRGQER-RRMP--LEDF 321 (462)
T ss_dssp HHHHH-TTTCHHHHHHHTTSSCHHHHTTCBHHHHHHHTCTT------CSHHHHHHHTTCEEEEEBTTBC-CCCB--GGGG
T ss_pred HHHHH-HHHhHHHHHHHHHhCChhheeeEEcccccccCCCc------chHHHHHHHcCCEEEEEeCCce-EEEE--HHHh
Confidence 99874 33321 1 111111 1335788998876633 55556666 7888888884 2222 2588
Q ss_pred hhhhhccCCCcceEEEEEEEEEEe
Q 043814 211 FWAIRGGGGGSFGIILAWKVKLVP 234 (524)
Q Consensus 211 f~a~rg~~~g~~GIvt~~tlk~~p 234 (524)
|.++|-.....=-||+++.|...+
T Consensus 322 ~~g~~~t~L~~~Eii~~i~iP~~~ 345 (462)
T 2w3s_A 322 FLEYRKQDRRPGEFVESVTLPKSA 345 (462)
T ss_dssp EEETTEESCCTTCEEEEEEEESCC
T ss_pred hcccccccCCCCcEEEEEEEecCC
Confidence 887763221122599999987654
No 32
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=96.11 E-value=0.0071 Score=59.93 Aligned_cols=157 Identities=10% Similarity=-0.035 Sum_probs=90.9
Q ss_pred CceEEEecCCHHHHHHHHHHHHhCCCeEEEEeCCcCCCCCccccCCCCCeEEEEcCCC---CceEEeCCCCeEEEeCCCC
Q 043814 62 KPEFIFTPLNESHVRAAVICSRDLRIHLRIRSGGHDYEGLSYVSQIETPFFLLDLAKL---RSIEVDINDNTAWVQAGAT 138 (524)
Q Consensus 62 ~P~~vv~p~s~edv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~~~~~vvIdl~~~---~~i~~d~~~~~v~v~~G~~ 138 (524)
.+...+.|+|.+|+.++++.. . ...+.+||++....-.. +......+||++++ +.|+. +++.+++|++++
T Consensus 9 ~~~~y~~P~sl~ea~~ll~~~---~-~a~~laGGT~l~~~~k~-~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~vt 81 (305)
T 3nvz_B 9 ERVTWIQASTLKELLDLKAQH---P-EAKLVVGNTEIGIEMKF-KNQLFPMIICPAWIPELNAVEH--GPEGISFGAACA 81 (305)
T ss_dssp SSCEEEECCSHHHHHHHHHHC---T-TCEECSSCTTHHHHHHH-SCCCCSEEEECTTCGGGGCEEE--CSSEEEEETTCB
T ss_pred CCeEEEccCCHHHHHHHHHhC---C-CCEEEECccHHHHHHhc-CCCCCCEEEECCCChhhcceEE--CCCeEEEccCCc
Confidence 567789999999999887543 1 25888999996421100 00013689999875 55665 456899999999
Q ss_pred HHHHHHHHHHh----C------C-CceEecCC------CCCccccccccCCCCCCCccccCCccccee----EEEEEccC
Q 043814 139 IGELYYRIAEK----S------N-TQGFTAGL------CPSVGSGGHITGGGYGTMMRKYGLGADNVV----DARIVDAS 197 (524)
Q Consensus 139 ~~~l~~~l~~~----g------~-~l~~~~g~------~~~vgvgG~~~ggg~G~~~~~~G~~~d~v~----~~~vv~~~ 197 (524)
+.++.+.+.+. . . .|.-.... -+..++||.+..+... +...--++ .+++..++
T Consensus 82 ~~~l~~~~~~~~~~~p~~~~~~~p~L~~a~~~ia~~qiRN~aTiGGNl~~a~p~------sD~~~~L~AldA~v~l~~~~ 155 (305)
T 3nvz_B 82 LSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASPI------SDLNPVFMASGTKLTIVSRG 155 (305)
T ss_dssp HHHHHHHHHHHHHHSCGGGCHHHHHHHHHHTTSSCHHHHTTCBHHHHHHHCCTT------CSSHHHHHHHTCEEEEEETT
T ss_pred HHHHHHHHHhhhcccchhhhhhhHHHHHHHHHhCCHHHhCeeechheeCCCCCc------hHHHHHHHHcCCEEEEEcCC
Confidence 99999876532 0 0 01000111 1345788888766431 22222222 56777788
Q ss_pred CcEEeccCCCchhhhhhhccCCCcceEEEEEEEEEE
Q 043814 198 GRILDREAMGEDLFWAIRGGGGGSFGIILAWKVKLV 233 (524)
Q Consensus 198 G~v~~~~~~~~dlf~a~rg~~~g~~GIvt~~tlk~~ 233 (524)
|+.... - ..|+|-+++--....=-|||++.+...
T Consensus 156 G~R~vp-~-~~df~~g~~~t~l~~~Eil~~I~iP~~ 189 (305)
T 3nvz_B 156 TRRTVP-M-DHTFFPSYRKTLLGPEEILLSIEIPYS 189 (305)
T ss_dssp EEEEEE-C-CGGGCCSTTCCSCCTTCEEEEEEEECC
T ss_pred CcEEEE-e-ehHhhcCcccccCCCCcEEEEEEecCC
Confidence 853221 1 125665544111011149999988643
No 33
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=93.62 E-value=0.085 Score=51.63 Aligned_cols=154 Identities=16% Similarity=0.032 Sum_probs=91.2
Q ss_pred CCceEEEecCCHHHHHHHHHHHHhCCCeEEEEeCCcCCCCCccccCCCCCeEEEEcCCC---CceEEeCCCCeEEEeCCC
Q 043814 61 PKPEFIFTPLNESHVRAAVICSRDLRIHLRIRSGGHDYEGLSYVSQIETPFFLLDLAKL---RSIEVDINDNTAWVQAGA 137 (524)
Q Consensus 61 ~~P~~vv~p~s~edv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~~~~~vvIdl~~~---~~i~~d~~~~~v~v~~G~ 137 (524)
+.|--++.|+|.+|+.++++. +-...+.+|||+....-. .+......+||++++ +.|+. +++.+++|+++
T Consensus 3 ~~~f~y~~P~sl~ea~~ll~~----~~~a~~laGGT~l~~~~k-~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~v 75 (288)
T 1t3q_C 3 FPAFSYRAPASLQEVIQVLAD----DPDARIIAGGQSLLPLLA-FRLVYPSCLVDLRNVSELFEISQ--SAGILSVGAMV 75 (288)
T ss_dssp CCCCEEECCSSHHHHHHHHHH----CTTCEEESSCTTHHHHHH-TTCCCCSEEEECTTCGGGGCEEE--ETTEEEEETTC
T ss_pred CCCceEECCCCHHHHHHHHhh----CCCCEEEeCchhHHHHHh-cCCCCCCEEEECCCChhhcCeEE--cCCEEEEcCCC
Confidence 345678999999999998864 223678899999531110 000013589999885 55665 45689999999
Q ss_pred CHHHHHH--HHHHhCCCceEec---C---CCCCccccccccCCCCCCCccccCCccccee-------EEEEEccCCcEEe
Q 043814 138 TIGELYY--RIAEKSNTQGFTA---G---LCPSVGSGGHITGGGYGTMMRKYGLGADNVV-------DARIVDASGRILD 202 (524)
Q Consensus 138 ~~~~l~~--~l~~~g~~l~~~~---g---~~~~vgvgG~~~ggg~G~~~~~~G~~~d~v~-------~~~vv~~~G~v~~ 202 (524)
++.+|.+ .+.++--.|.-.. + .-+..++||.+..+- ..+|... .+++..++|+...
T Consensus 76 t~~~l~~~~~~~~~~p~L~~a~~~ias~qiRN~aTiGGNi~~a~---------p~sD~~~~L~Al~A~v~l~~~~g~R~v 146 (288)
T 1t3q_C 76 THFRNKTDPTVAKCVPILPKVLAHVAHQAVRNRGTLGGSLAHAD---------AGAEMPFLMATLGATMYIASSAGVRSV 146 (288)
T ss_dssp BHHHHHHCHHHHHHCTHHHHHHTTSSCHHHHTTCBHHHHHHHTC---------TTCHHHHHHHHTTCEEEEEETTEEEEE
T ss_pred cHHHHhcCHHHHHHHHHHHHHHHHhCCHHHHcceechhhcccCC---------CcHHHHHHHHHcCcEEEEEcCCceEEE
Confidence 9999986 3433211111001 1 113346888886442 2356665 6777788885332
Q ss_pred ccCCCchhhhhhhccCCCcceEEEEEEEEEE
Q 043814 203 REAMGEDLFWAIRGGGGGSFGIILAWKVKLV 233 (524)
Q Consensus 203 ~~~~~~dlf~a~rg~~~g~~GIvt~~tlk~~ 233 (524)
+- .|+|.+.+--....=-|||++.+...
T Consensus 147 -p~--~dF~~g~~~t~L~~~Eil~~I~iP~~ 174 (288)
T 1t3q_C 147 -SA--TDFMKGHYFTDLEAGEVLVRVEIPIP 174 (288)
T ss_dssp -EH--HHHEEETTEESCCTTCEEEEEEEECC
T ss_pred -EH--HHHhcCcccccCCCCCEEEEEEecCC
Confidence 11 36665443111012258999988643
No 34
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=92.11 E-value=0.2 Score=49.12 Aligned_cols=76 Identities=22% Similarity=0.230 Sum_probs=52.6
Q ss_pred ceEEEecCCHHHHHHHHHHHHhCCC-eEEEEeCCcCCCCCccccCCCCCeEEEEcCCCC---ceEEeCCCCeEEEeCCCC
Q 043814 63 PEFIFTPLNESHVRAAVICSRDLRI-HLRIRSGGHDYEGLSYVSQIETPFFLLDLAKLR---SIEVDINDNTAWVQAGAT 138 (524)
Q Consensus 63 P~~vv~p~s~edv~~~v~~a~~~~~-~v~~~ggGh~~~g~~~~~~~~~~~vvIdl~~~~---~i~~d~~~~~v~v~~G~~ 138 (524)
|-..+.|+|.+|..++++. ++- ...+.+||++....- ..+......+||++++. .|+. +++.+++|++++
T Consensus 3 ~f~y~~P~sl~ea~~ll~~---~~~~~a~~laGGT~l~~~~-k~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~vt 76 (296)
T 3hrd_C 3 DFEFFAPKTLEEAKGLLHQ---YKDVPPAIIAGGTDLVIEI-NDRWEKPDVVIDIKKLKELEYIRV--EENTIHIGALST 76 (296)
T ss_dssp CCEEECCSSHHHHHHHHHH---TTTSCCEEESSCTTHHHHH-HTTSCCCSEEEECTTCGGGCCEEE--CSSEEEEETTCB
T ss_pred ceeEeCCCCHHHHHHHHHh---CCCCCeEEEECCcHHHHHh-hcCCCCCCeEEEcccChhhcceEE--cCCeEEEccCCc
Confidence 4567899999999887754 332 467889999964210 00000136899999864 4554 466899999999
Q ss_pred HHHHHH
Q 043814 139 IGELYY 144 (524)
Q Consensus 139 ~~~l~~ 144 (524)
+.++.+
T Consensus 77 ~~~l~~ 82 (296)
T 3hrd_C 77 FTQIEN 82 (296)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999974
No 35
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=87.98 E-value=0.63 Score=49.36 Aligned_cols=29 Identities=21% Similarity=0.174 Sum_probs=22.8
Q ss_pred hhhhhhcccH-HHHHHHHhhcCCCCCCccC
Q 043814 481 WGTKYFKDNF-NRLVRVKIKVDPDNIFRHE 509 (524)
Q Consensus 481 ~~~~y~g~n~-~RL~~IK~kyDP~nvF~~~ 509 (524)
|...+||++. +=+++||+.+||+|+|+--
T Consensus 481 ~~~~~~g~~~~~lmr~IK~a~DP~~IlNPG 510 (520)
T 1wvf_A 481 RVAQSYGPVKRKLEHAIKRAVDPNNILAPG 510 (520)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCTTCCBCTT
T ss_pred hhhhhcCHHHHHHHHHHHHHcCCCCCCCCC
Confidence 4477888765 4459999999999999643
No 36
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=87.11 E-value=0.67 Score=45.96 Aligned_cols=77 Identities=18% Similarity=0.124 Sum_probs=52.9
Q ss_pred CceEEEecCCHHHHHHHHHHHHhCCCeEEEEeCCcCCCCCccccCCCCCeEEEEcCCC---CceEEeCCCCeEEEeCCCC
Q 043814 62 KPEFIFTPLNESHVRAAVICSRDLRIHLRIRSGGHDYEGLSYVSQIETPFFLLDLAKL---RSIEVDINDNTAWVQAGAT 138 (524)
Q Consensus 62 ~P~~vv~p~s~edv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~~~~~vvIdl~~~---~~i~~d~~~~~v~v~~G~~ 138 (524)
.|-..+.|+|.+|..++++. -.-.+.+||+++...- ..+......+||++++ +.|+.++ ++.+++|++++
T Consensus 5 ~~f~y~~P~sl~ea~~ll~~-----~~a~~lAGGT~l~~~~-k~~~~~p~~lIdi~~i~eL~~I~~~~-~~~l~IGA~vt 77 (324)
T 1rm6_B 5 TDFRTHRPATLADAVNALAA-----EATLPLGAGTDLLPNL-RRGLGHPAALVDLTGIDGLATISTLA-DGSLRIGAGAT 77 (324)
T ss_dssp CCCEEECCSSHHHHHHHTTS-----TTEEEESSCTTHHHHH-HTTSCCCSEEEECTTSTTTTCEEECT-TSCEEEETTCB
T ss_pred CceEEEccCCHHHHHHHHhC-----CCCEEEECchhHHHHH-hccCCCCCEEEECCCChhhcceEECC-CCeEEEccCCc
Confidence 45568899999999888762 2478889999963210 0000023689999876 5566543 34699999999
Q ss_pred HHHHHHH
Q 043814 139 IGELYYR 145 (524)
Q Consensus 139 ~~~l~~~ 145 (524)
+.+|.+.
T Consensus 78 ~~~l~~~ 84 (324)
T 1rm6_B 78 LEAIAEH 84 (324)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 9999764
No 37
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=80.71 E-value=2.8 Score=45.70 Aligned_cols=28 Identities=43% Similarity=0.634 Sum_probs=23.6
Q ss_pred hhhhhhhcc-cHHHHHHHHhhcCCCCCCc
Q 043814 480 AWGTKYFKD-NFNRLVRVKIKVDPDNIFR 507 (524)
Q Consensus 480 ~~~~~y~g~-n~~RL~~IK~kyDP~nvF~ 507 (524)
.|-..+||+ .++.|++||+.|||+|+|+
T Consensus 625 ~~l~~~~g~~~l~lmr~IK~a~DP~gILN 653 (658)
T 4bby_A 625 QWLKESISDVGFGMLKSVKDYVDPTNIFG 653 (658)
T ss_dssp GGHHHHHCHHHHHHHHHHHHHHSTTCSSC
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCcccCCC
Confidence 466666775 7999999999999999995
No 38
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=71.93 E-value=3.9 Score=48.20 Aligned_cols=79 Identities=5% Similarity=-0.078 Sum_probs=54.4
Q ss_pred CceEEEecCCHHHHHHHHHHHHhCCCeEEEEeCCcCCCCCccccCCCCCeEEEEcCCC---CceEEeCCCCeEEEeCCCC
Q 043814 62 KPEFIFTPLNESHVRAAVICSRDLRIHLRIRSGGHDYEGLSYVSQIETPFFLLDLAKL---RSIEVDINDNTAWVQAGAT 138 (524)
Q Consensus 62 ~P~~vv~p~s~edv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~~~~~vvIdl~~~---~~i~~d~~~~~v~v~~G~~ 138 (524)
.+...++|.|.+|+.++++... .-.+.+||++..-.-. ........+||++++ +.|+.+ ++.+++|++++
T Consensus 232 ~~~~~~~P~sl~ea~~ll~~~~----~a~lvaGgT~l~~~~k-~~~~~~~~lIdl~~i~EL~~I~~~--~~~l~IGA~vt 304 (1332)
T 3unc_A 232 ERVTWIQASTLKELLDLKAQHP----EAKLVVGNTEIGIEMK-FKNQLFPMIICPAWIPELNAVEHG--PEGISFGAACA 304 (1332)
T ss_dssp SSCEEEECCSHHHHHHHHHHCT----TCEECSSCTTHHHHHH-HSCCCCSEEEECTTCGGGGCEEEC--SSEEEEETTCB
T ss_pred CceEEEccCCHHHHHHHHhhCC----CCEEEEeCcHHHHHhh-cCCCCCCeEEEcCCCHHhCceEEe--CCEEEEEecCh
Confidence 4566899999999988775421 2477899998531110 000012589999885 456554 56799999999
Q ss_pred HHHHHHHHH
Q 043814 139 IGELYYRIA 147 (524)
Q Consensus 139 ~~~l~~~l~ 147 (524)
+.+|.+.+.
T Consensus 305 l~~l~~~l~ 313 (1332)
T 3unc_A 305 LSSVEKTLL 313 (1332)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999988764
No 39
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=58.97 E-value=11 Score=40.06 Aligned_cols=21 Identities=24% Similarity=0.188 Sum_probs=18.1
Q ss_pred cHHHHHHHHhhcCCCCCCccC
Q 043814 489 NFNRLVRVKIKVDPDNIFRHE 509 (524)
Q Consensus 489 n~~RL~~IK~kyDP~nvF~~~ 509 (524)
.++-+++||+.+||+|+|+--
T Consensus 524 ~~~lm~~iK~~~DP~gILNPG 544 (560)
T 1e8g_A 524 FLRFNEVLKNAVDPNGIIAPG 544 (560)
T ss_dssp HHHHHHHHHHHHCTTCCBCTT
T ss_pred HHHHHHHHHHHcCccCCCCCC
Confidence 578889999999999999643
No 40
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=51.87 E-value=6.4 Score=41.96 Aligned_cols=22 Identities=18% Similarity=0.445 Sum_probs=20.5
Q ss_pred ccHHHHHHHHhhcCCCCCCccC
Q 043814 488 DNFNRLVRVKIKVDPDNIFRHE 509 (524)
Q Consensus 488 ~n~~RL~~IK~kyDP~nvF~~~ 509 (524)
+++++.+++|+++||+++|...
T Consensus 533 p~~~~f~~~r~~~DP~g~F~n~ 554 (561)
T 2i0k_A 533 ENWDTARARYNQIDPHRVFTNG 554 (561)
T ss_dssp SSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCHHHHHHHHHhcCCCCccCCH
Confidence 8999999999999999999764
No 41
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=49.51 E-value=17 Score=38.45 Aligned_cols=23 Identities=17% Similarity=0.280 Sum_probs=21.0
Q ss_pred cccHHHHHHHHhhcCCCCCCccC
Q 043814 487 KDNFNRLVRVKIKVDPDNIFRHE 509 (524)
Q Consensus 487 g~n~~RL~~IK~kyDP~nvF~~~ 509 (524)
|+|++.-+++++++||+++|.++
T Consensus 511 ~~~~~~~~~~~~~~DP~~~F~n~ 533 (540)
T 3js8_A 511 AANWDAAKAALAAYDPYRLFSSP 533 (540)
T ss_dssp GGSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCCHHHHHHHHHhcCCCcccCCH
Confidence 58999999999999999999764
No 42
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=47.49 E-value=24 Score=29.39 Aligned_cols=37 Identities=5% Similarity=0.055 Sum_probs=32.2
Q ss_pred CCceEEEecCCHHHHHHHHHHHHhCCCeE-EEEeCCcC
Q 043814 61 PKPEFIFTPLNESHVRAAVICSRDLRIHL-RIRSGGHD 97 (524)
Q Consensus 61 ~~P~~vv~p~s~edv~~~v~~a~~~~~~v-~~~ggGh~ 97 (524)
..+..|+++.+++++.++.+.|++.|+|. .|+-.|+.
T Consensus 47 G~~Kvvlk~~~e~el~~L~~~a~~~gl~~~~I~DAG~T 84 (123)
T 1rzw_A 47 GQKKVVLKVKSLEELLGIKHKAESLGLVTGLVQDAGLT 84 (123)
T ss_dssp CSSEEEEECSCHHHHHHHHHHHHHTTCCEEEECCTTCC
T ss_pred CCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEECCCCc
Confidence 48999999999999999999999999986 55666764
No 43
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=44.86 E-value=19 Score=42.47 Aligned_cols=80 Identities=6% Similarity=-0.009 Sum_probs=50.5
Q ss_pred eEEEecCCHHHHHHHHHHHHhCCCeEEEEeCCcCCCCCccccCCCCCeEEEEcCCCCce-EEeCCCCeEEEeCCCCHHHH
Q 043814 64 EFIFTPLNESHVRAAVICSRDLRIHLRIRSGGHDYEGLSYVSQIETPFFLLDLAKLRSI-EVDINDNTAWVQAGATIGEL 142 (524)
Q Consensus 64 ~~vv~p~s~edv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~~~~~vvIdl~~~~~i-~~d~~~~~v~v~~G~~~~~l 142 (524)
...+.|.|.+|+.++...-- +-+ +..|++...- -.......-.++||+.+...+ .+..++..+++|++|++.++
T Consensus 241 ~~w~~P~tl~el~~l~~~~p--~a~--lvaGnT~~gl-~~~~~~~~~~~~I~~~~v~EL~~i~~~~~~l~IGA~vtls~~ 315 (1335)
T 3zyv_A 241 TTWIAPGTLNDLLELKMKHP--SAP--LVIGNTYLGL-HMKFTDVSYPIIISPARILELFVVTNTKQGLTLGTGLSLTQV 315 (1335)
T ss_dssp CEEEECSSHHHHHHHHHHCT--TSC--BCSSCTTHHH-HHC--CCCCSEEECCTTCGGGSCEECCTTEEEEETTCBHHHH
T ss_pred ceEecCCCHHHHHHHHHHCC--CCe--EEEeccccee-eEeecCCCCCeEEEcCcchhHheEEecCCEEEEcccCcHHHH
Confidence 34789999999988754322 233 4556665321 000100012588998775543 34455668999999999999
Q ss_pred HHHHHH
Q 043814 143 YYRIAE 148 (524)
Q Consensus 143 ~~~l~~ 148 (524)
.+.|.+
T Consensus 316 ~~~l~~ 321 (1335)
T 3zyv_A 316 KNVLSD 321 (1335)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888764
No 44
>1wn2_A Peptidyl-tRNA hydrolase; riken structural genomics/proteomics initiative, structural genomics; 1.20A {Pyrococcus horikoshii} PDB: 2d3k_A
Probab=44.68 E-value=35 Score=28.30 Aligned_cols=37 Identities=14% Similarity=0.091 Sum_probs=32.3
Q ss_pred CCCceEEEecCCHHHHHHHHHHHHhCCCeE-EEEeCCc
Q 043814 60 MPKPEFIFTPLNESHVRAAVICSRDLRIHL-RIRSGGH 96 (524)
Q Consensus 60 ~~~P~~vv~p~s~edv~~~v~~a~~~~~~v-~~~ggGh 96 (524)
...|..|+++.+++++.++.+.|++.|+|. .++-.|+
T Consensus 53 ~g~~Kvvlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~ 90 (121)
T 1wn2_A 53 EGQKKVVVKVESEEELFKLKAEAEKLGLPNALIRDAGL 90 (121)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECTTC
T ss_pred CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCc
Confidence 468999999999999999999999999986 4566666
No 45
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=44.46 E-value=35 Score=28.16 Aligned_cols=41 Identities=12% Similarity=0.233 Sum_probs=34.2
Q ss_pred ccCCCCCCCceEEEecCCHHHHHHHHHHHHhCCCeE-EEEeCCc
Q 043814 54 RYLVPSMPKPEFIFTPLNESHVRAAVICSRDLRIHL-RIRSGGH 96 (524)
Q Consensus 54 r~~~~~~~~P~~vv~p~s~edv~~~v~~a~~~~~~v-~~~ggGh 96 (524)
+|.. ...|..|+++.+++++.++.+.|++.|++. .++=.|+
T Consensus 48 ~W~~--~g~~KiVlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~ 89 (120)
T 1xty_A 48 EWLH--QGQPKIIVKVNSLDEIISRAKKAETMNLPFSIIEDAGK 89 (120)
T ss_dssp HHHH--TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred HHHH--CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCc
Confidence 4642 468999999999999999999999999986 4566666
No 46
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=42.97 E-value=9.6 Score=40.68 Aligned_cols=26 Identities=19% Similarity=0.120 Sum_probs=19.3
Q ss_pred cccHHHHHHHHhhcCCCCCCccCCCCC
Q 043814 487 KDNFNRLVRVKIKVDPDNIFRHEQSIP 513 (524)
Q Consensus 487 g~n~~RL~~IK~kyDP~nvF~~~~~I~ 513 (524)
++... |++||+.+||.|+|+--.-+.
T Consensus 536 ~~~~~-m~~iK~~~DP~~ilNPGk~~t 561 (571)
T 1f0x_A 536 KAPET-LQKFYRENDPTNSMNPGIGKT 561 (571)
T ss_dssp CCCHH-HHHHHHHHCTTCCBSTTTTTC
T ss_pred CCHHH-HHHHHHHhCCCCCCCCCcCcC
Confidence 44444 999999999999996543333
No 47
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=42.60 E-value=34 Score=28.05 Aligned_cols=37 Identities=16% Similarity=0.149 Sum_probs=31.0
Q ss_pred CCCceEEEecCCHHHHHHHHHHHHhCCCeE-EEEeCCc
Q 043814 60 MPKPEFIFTPLNESHVRAAVICSRDLRIHL-RIRSGGH 96 (524)
Q Consensus 60 ~~~P~~vv~p~s~edv~~~v~~a~~~~~~v-~~~ggGh 96 (524)
...|..|+++.+++++.++.+.|++.|+|. .++-.|+
T Consensus 47 ~g~~kivlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~ 84 (115)
T 2zv3_A 47 EGQKKVVVKVNSEKELIDIYNKARSEGLPCSIIRDAGH 84 (115)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEEECC-
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 468999999999999999999999999986 4455554
No 48
>1rlk_A Hypothetical protein TA0108; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; HET: SO4; 1.95A {Thermoplasma acidophilum} SCOP: c.131.1.1
Probab=41.43 E-value=36 Score=28.01 Aligned_cols=38 Identities=5% Similarity=0.018 Sum_probs=32.3
Q ss_pred CCCceEEEecCCHHHHHHHHHHHHhCCCeE-EEEeCCcC
Q 043814 60 MPKPEFIFTPLNESHVRAAVICSRDLRIHL-RIRSGGHD 97 (524)
Q Consensus 60 ~~~P~~vv~p~s~edv~~~v~~a~~~~~~v-~~~ggGh~ 97 (524)
...|..|+++.+++++.++.+.|++.|+|. .++-.|+.
T Consensus 49 ~g~~kiVlk~~~e~~l~~l~~~a~~~gl~~~~v~DAG~T 87 (117)
T 1rlk_A 49 EGQRKIVVKVNDLDEIMEIKRMADSMGIVNEIVQDRGYT 87 (117)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEECCCSS
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence 468999999999999999999999999986 45556653
No 49
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=37.69 E-value=42 Score=35.80 Aligned_cols=27 Identities=30% Similarity=0.522 Sum_probs=18.1
Q ss_pred hhhhhhcc-cHHHHHHHHhhcCCCCCCc
Q 043814 481 WGTKYFKD-NFNRLVRVKIKVDPDNIFR 507 (524)
Q Consensus 481 ~~~~y~g~-n~~RL~~IK~kyDP~nvF~ 507 (524)
|....+|+ .++=+++||+.+||+|+|+
T Consensus 552 ~l~~~~g~~~~~lmr~iK~a~DP~gIlN 579 (584)
T 2uuu_A 552 WMTRYATRGWINVYRSLKETIDPKDICN 579 (584)
T ss_dssp -------CTHHHHHHHHHHHHCTTCCBS
T ss_pred HHHHhcCHHHHHHHHHHHHHcCCCcCCC
Confidence 44445554 6899999999999999995
No 50
>1q7s_A BIT1, protein CGI-147; apoptosis; 2.00A {Homo sapiens} SCOP: c.131.1.1
Probab=35.21 E-value=64 Score=26.43 Aligned_cols=37 Identities=16% Similarity=0.315 Sum_probs=31.5
Q ss_pred CCCceEEEecCCHHHHHHHHHHHHhCCCeE-EEEeCCc
Q 043814 60 MPKPEFIFTPLNESHVRAAVICSRDLRIHL-RIRSGGH 96 (524)
Q Consensus 60 ~~~P~~vv~p~s~edv~~~v~~a~~~~~~v-~~~ggGh 96 (524)
...|..+++..+++++.++.+.|.+.|+|. .++=.|+
T Consensus 49 ~g~~KVvlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~ 86 (117)
T 1q7s_A 49 CGQPKVVVKAPDEETLIALLAHAKMLGLTVSLIQDAGR 86 (117)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred CCCeeEEEEcCCHHHHHHHHHHHHHCCCCEEEEEECCC
Confidence 357999999999999999999999999985 4555665
No 51
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=32.67 E-value=49 Score=25.10 Aligned_cols=34 Identities=18% Similarity=0.234 Sum_probs=29.5
Q ss_pred eEEEecCCHHHHHHHHHHHHhCCCeEEEEeCCcC
Q 043814 64 EFIFTPLNESHVRAAVICSRDLRIHLRIRSGGHD 97 (524)
Q Consensus 64 ~~vv~p~s~edv~~~v~~a~~~~~~v~~~ggGh~ 97 (524)
.+|-..++.+||..+|+-.+.+|.|+.+.-.|.+
T Consensus 29 ryirtatssqdirdiiksmkdngkplvvfvngas 62 (112)
T 2lnd_A 29 RYIRTATSSQDIRDIIKSMKDNGKPLVVFVNGAS 62 (112)
T ss_dssp TTEEEECSHHHHHHHHHHHTTCCSCEEEEECSCC
T ss_pred ceeeeccchhhHHHHHHHHHhcCCeEEEEecCcc
Confidence 3466788999999999999999999999877765
No 52
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=26.80 E-value=39 Score=33.72 Aligned_cols=28 Identities=18% Similarity=0.107 Sum_probs=23.6
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEE--eCCcC
Q 043814 70 LNESHVRAAVICSRDLRIHLRIR--SGGHD 97 (524)
Q Consensus 70 ~s~edv~~~v~~a~~~~~~v~~~--ggGh~ 97 (524)
=|.+|++++|++|+++++.|++- .=||.
T Consensus 92 YT~~di~eiv~YA~~rgI~VIPEID~PGH~ 121 (367)
T 1yht_A 92 LSYRQLDDIKAYAKAKGIELIPELDSPNHM 121 (367)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEEEEESSSC
T ss_pred cCHHHHHHHHHHHHHcCCEEEEeccchHHH
Confidence 48999999999999999999873 34665
No 53
>2b0t_A NADP isocitrate dehydrogenase; monomeric, IDH, oxidoreductase; 1.75A {Corynebacterium glutamicum} PDB: 3mbc_A*
Probab=24.83 E-value=69 Score=33.67 Aligned_cols=130 Identities=17% Similarity=0.273 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHhCCCeEEEEeCCcCCCCCccccCCCCCeEEEEcC--CCC---ceEEeCCCC---eEEEeCCC----CH
Q 043814 72 ESHVRAAVICSRDLRIHLRIRSGGHDYEGLSYVSQIETPFFLLDLA--KLR---SIEVDINDN---TAWVQAGA----TI 139 (524)
Q Consensus 72 ~edv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~~~~~vvIdl~--~~~---~i~~d~~~~---~v~v~~G~----~~ 139 (524)
.++|.+.+..+.+++-++..+.+-.+++....+.+ |+||-+ .|= +--.++++. +..|=|-- ..
T Consensus 308 ~~eI~a~i~a~~~~~P~laMVdSdkGITNLHvPsD-----VIiDASMPAmIR~~GkmW~~dG~~~Dt~aviPD~~YA~iY 382 (738)
T 2b0t_A 308 GEEIKAAFEKGLEDGPDLAMVNSARGITNLHVPSD-----VIVDASMPAMIRTSGHMWNKDDQEQDTLAIIPDSSYAGVY 382 (738)
T ss_dssp HHHHHHHHHHHHHHSCCBCEEEGGGTEETTTCTTT-----SBHHHHHHHHHHTTTEEECTTSCEEEEEEECSSHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCeEEecccCCccccCCCCC-----eEEeCCcHHHHhccCcccCCCCCcccceEeCCCcchHHHH
Confidence 59999999999999988999988877777777776 777743 221 112344433 34443422 24
Q ss_pred HHHHHHHHHhCCCceEec---CCCCCccccccccCCC--CCCCccccCCcccceeEEEEEccCCcEEe-ccCCCchhhhh
Q 043814 140 GELYYRIAEKSNTQGFTA---GLCPSVGSGGHITGGG--YGTMMRKYGLGADNVVDARIVDASGRILD-REAMGEDLFWA 213 (524)
Q Consensus 140 ~~l~~~l~~~g~~l~~~~---g~~~~vgvgG~~~ggg--~G~~~~~~G~~~d~v~~~~vv~~~G~v~~-~~~~~~dlf~a 213 (524)
.++++.+.++|- +.+ |+.+.| |+++--+ +|..-..|-...|- .++||+.+|+++. -..+..|+|.+
T Consensus 383 q~~I~~ck~nGa---fDP~TmGsVpNV---GLMAqKAEEYGSHdKTFei~~~G--~v~vvd~~G~vl~eh~Ve~GDIwRm 454 (738)
T 2b0t_A 383 QTVIEDCRKNGA---FDPTTMGTVPNV---GLMAQKAEEYGSHDKTFRIEADG--VVQVVSSNGDVLIEHDVEANDIWRA 454 (738)
T ss_dssp HHHHHHHHHHCS---CCTTTCCCCCEE---ECCTTTCGGGGCGGGEEECCSSE--EEEEECTTSCEEEEEEECTTCEEEE
T ss_pred HHHHHHHHhcCC---CCcccccCCccH---HHHHHHHHHhCCCCcceECCCCc--eEEEEeCCCCEEEeccccCCcchhh
Confidence 667789999983 344 555555 4444332 22222222222233 4577888999884 22234566654
Q ss_pred h
Q 043814 214 I 214 (524)
Q Consensus 214 ~ 214 (524)
+
T Consensus 455 c 455 (738)
T 2b0t_A 455 C 455 (738)
T ss_dssp E
T ss_pred h
Confidence 4
No 54
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=24.38 E-value=1.2e+02 Score=26.23 Aligned_cols=40 Identities=15% Similarity=0.162 Sum_probs=33.4
Q ss_pred eEEEecCCHHHHHHHHHHHHhCCCeEEEEeCCcCCCCCcc
Q 043814 64 EFIFTPLNESHVRAAVICSRDLRIHLRIRSGGHDYEGLSY 103 (524)
Q Consensus 64 ~~vv~p~s~edv~~~v~~a~~~~~~v~~~ggGh~~~g~~~ 103 (524)
...+.|.+.++|+++++.+.+.+.-+++..||.+....+.
T Consensus 47 ~~~iv~Dd~~~I~~~l~~a~~~~~DlVittGG~g~~~~D~ 86 (167)
T 2g2c_A 47 SEVVVPEGYDTVVEAIATALKQGARFIITAGGTGIRAKNQ 86 (167)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTTCSEEEEESCCSSSTTCC
T ss_pred EEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcC
Confidence 4578899999999999998876688999999998765443
No 55
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.89 E-value=2.1e+02 Score=21.82 Aligned_cols=34 Identities=15% Similarity=0.190 Sum_probs=25.2
Q ss_pred eEEeCCCCeEEEeCCCCHHHHHHHHHHhCCCceE
Q 043814 122 IEVDINDNTAWVQAGATIGELYYRIAEKSNTQGF 155 (524)
Q Consensus 122 i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~ 155 (524)
+.+|...+.++|..-+...+|.+.+.+.|+...+
T Consensus 49 v~vdl~~~~~~V~~~~~~~~i~~~i~~~Gy~~~~ 82 (98)
T 2crl_A 49 VEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVL 82 (98)
T ss_dssp EEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEE
T ss_pred EEEECCCCEEEEEEeCCHHHHHHHHHHhCCceEE
Confidence 4566677777777667888999999988865333
No 56
>2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A*
Probab=21.93 E-value=54 Score=33.61 Aligned_cols=28 Identities=25% Similarity=0.272 Sum_probs=24.4
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEE--eCCcC
Q 043814 70 LNESHVRAAVICSRDLRIHLRIR--SGGHD 97 (524)
Q Consensus 70 ~s~edv~~~v~~a~~~~~~v~~~--ggGh~ 97 (524)
=|.+|++++|++|++++|.|++- .=||.
T Consensus 92 YT~~di~eIv~YA~~rgI~VIPEID~PGH~ 121 (442)
T 2yl5_A 92 LTQAEVTELIEYAKSKDIGLIPAINSPGHM 121 (442)
T ss_dssp BCHHHHHHHHHHHHTTTCEEEEEEEESSSC
T ss_pred cCHHHHHHHHHHHHHcCCeeeeecccchhH
Confidence 38999999999999999999873 45886
No 57
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=21.65 E-value=1.5e+02 Score=25.75 Aligned_cols=39 Identities=15% Similarity=0.135 Sum_probs=32.5
Q ss_pred eEEEecCCHHHHHHHHHHHHhC-CCeEEEEeCCcCCCCCc
Q 043814 64 EFIFTPLNESHVRAAVICSRDL-RIHLRIRSGGHDYEGLS 102 (524)
Q Consensus 64 ~~vv~p~s~edv~~~v~~a~~~-~~~v~~~ggGh~~~g~~ 102 (524)
...+.|.+.++|+++|+.+.+. +.-+++..||.+....+
T Consensus 46 ~~~iv~Dd~~~i~~~l~~a~~~~~~DlVittGG~g~~~~D 85 (172)
T 1mkz_A 46 DKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLTEGD 85 (172)
T ss_dssp EEEEECSCHHHHHHHHHHHHHSSSCCEEEEESCCSSSTTC
T ss_pred EEEEeCCCHHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCC
Confidence 4578899999999999998876 68899999999876443
No 58
>2kxh_B Peptide of FAR upstream element-binding protein 1; RRM, FIR, FBP, protein-protein complex, protein binding; NMR {Homo sapiens}
Probab=21.01 E-value=51 Score=20.09 Aligned_cols=19 Identities=32% Similarity=0.552 Sum_probs=16.1
Q ss_pred hcccHHHHHHHHhhcCCCC
Q 043814 486 FKDNFNRLVRVKIKVDPDN 504 (524)
Q Consensus 486 ~g~n~~RL~~IK~kyDP~n 504 (524)
|.+-++|-+||..|.+++.
T Consensus 10 FadA~~RaRQIaAKig~~~ 28 (31)
T 2kxh_B 10 FKDALQRARQIAAKIGGDA 28 (31)
T ss_dssp HHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHhcCCC
Confidence 4578999999999998764
No 59
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=20.74 E-value=1.6e+02 Score=25.79 Aligned_cols=39 Identities=15% Similarity=0.334 Sum_probs=31.9
Q ss_pred eEEEecCCHHHHHHHHHHHHhC-CCeEEEEeCCcCCCCCc
Q 043814 64 EFIFTPLNESHVRAAVICSRDL-RIHLRIRSGGHDYEGLS 102 (524)
Q Consensus 64 ~~vv~p~s~edv~~~v~~a~~~-~~~v~~~ggGh~~~g~~ 102 (524)
...+.|.+.++|+++++.+.+. +.-+++..||.+....+
T Consensus 58 ~~~iv~Dd~~~I~~al~~a~~~~~~DlVittGG~s~g~~D 97 (178)
T 2pjk_A 58 GYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYSPTD 97 (178)
T ss_dssp EEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSSTTC
T ss_pred EEEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCc
Confidence 4557899999999999888765 58899999999876443
No 60
>2yl6_A Beta-N-acetylhexosaminidase; peptidoglycan-anchor, hydrolase; HET: ETE; 1.60A {Streptococcus pneumoniae} PDB: 2yll_A* 2yl8_A* 3rpm_A*
Probab=20.40 E-value=52 Score=33.63 Aligned_cols=29 Identities=31% Similarity=0.293 Sum_probs=24.7
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEE--eCCcCC
Q 043814 70 LNESHVRAAVICSRDLRIHLRIR--SGGHDY 98 (524)
Q Consensus 70 ~s~edv~~~v~~a~~~~~~v~~~--ggGh~~ 98 (524)
=|.+|++++|++|++++|.|+|- .=||.-
T Consensus 89 YT~~di~eIv~YA~~rgI~VIPEID~PGH~~ 119 (434)
T 2yl6_A 89 LTESQMTDLINYAKDKGIGLIPTVNSPGHMD 119 (434)
T ss_dssp EEHHHHHHHHHHHHHTTCEEEEEEEESSSCH
T ss_pred cCHHHHHHHHHHHHHcCCEEEEeccccchHH
Confidence 38899999999999999999873 458873
No 61
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=20.18 E-value=1.6e+02 Score=26.02 Aligned_cols=39 Identities=15% Similarity=0.154 Sum_probs=31.9
Q ss_pred eEEEecCCHHHHHHHHHHHHhCCCeEEEEeCCcCCCCCc
Q 043814 64 EFIFTPLNESHVRAAVICSRDLRIHLRIRSGGHDYEGLS 102 (524)
Q Consensus 64 ~~vv~p~s~edv~~~v~~a~~~~~~v~~~ggGh~~~g~~ 102 (524)
...+.|.+.++|++.|+.+.+.+.-+++..||.+....+
T Consensus 67 ~~~iv~Dd~~~I~~al~~a~~~~~DlVIttGGts~g~~D 105 (185)
T 3rfq_A 67 GVVAVEADEVDIRNALNTAVIGGVDLVVSVGGTGVTPRD 105 (185)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCSEEEEESCCSSSTTC
T ss_pred EEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCcc
Confidence 456789999999999988865677899999999976443
Done!