Citrus Sinensis ID: 043820

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280--
Protein Sequence
MKLPDATPSRVSKSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGELIDMRDFPDGGQDLYIRMSASEIGTRGLVFVTPLWELTKYTDQGAKGKPTTKIVVIVVPTAALLAALILSNISEKTENNRETDQVQNMDLELPLFELATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPAQGFAIPSVNS
Secondary Structure (PSIPRED)
cccccccccEEcccccHHHHHHHHHccccEEEEEccccccccccEEEEcccccEEEEcccccEEEEEEEccccccccccEEEEcccccccccccccccccEEEEEEEHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccEEcccccEEEEEEccccccccHHHHHHHHHHHHHcccccccccccccccccEEEEEEEEEccccccccccccccccccccccccccEEEEccccc
Secondary Structure Prediction (SSPRO)
ccccccccEEEcccccHHHHHHHHHHcccEEEEEEEcccccccEEEEEEcccHHHHHcccccccEEEEEccHHHccccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEcHHHHHHHHccccccccccccccccEEEccccccEHcHHcccccccccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEcccccccEEEEccccccccccHHHHccEEEEEccc
Coil and Loop (DISEMBL)
mklpdatpsrvsksinlnecrekclensscmvytnldirgggsgcamwfgelidmrdfpdggqdLYIRMSaseigtrglvFVTPlweltkytdqgakgkpttkIVVIVVPTAALLAALILSNIsektennretdqvqnmdlelpLFELATIAnatdnfsinnklgeggfgpvYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIFFARSVTEVAKIYArsrprsypsvvirpgykvGLILelkpdpdpnpdrlhssrvrslqypdpaqgfaipsvns
Flexible Loop (DISEMBL)
mklpdatpsrvsksinlnecrekclENSSCMVYTNLDIRGGGSGCAMWFGELIDMRDFPDGGQDLYIRMSASEIGTRGLVFVTPLWELTKytdqgakgkpttKIVVIVVPTAALLAALILsnisektennreTDQVQNMDLELPLFELATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIFFARSVTEVAKIyarsrprsypsvvirpGYKVGLILELKPDPDPNPDRLHSSrvrslqypdpaqgfaipsvns
Low Complexity Region (SEG)
MKLPDATPSRVSKSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGELIDMRDFPDGGQDLYIRMSASEIGTRGLVFVTPLWELTKYTDQGAKGkpttkivvivvptaallaalilsniSEKTENNRETDQVQNMDLELPLFELATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGaridarvvaarivfaGSVTGIFFARSVTEVAKIYARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPAQGFAIPSVNS
Disordered region (IsUnstruct)
****************LNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGELIDMRDFPDGGQDLYIRMSASEIGTRGLVFVTPLWELTKYTDQGAKGKPTTKIVVIVVPTAALLAALILSNI***************MDLELPLFELATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRPRSYPSVVIRPGYKVGLILEL***********************************
Disordered Region (DISOPRED)
MKLPDATPSRVSKSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGELIDMRDFPDGGQDLYIRMSASEIGTRGLVFVTPLWELTKYTDQGAKGKPTTKIVVIVVPTAALLAALILSNIS*******************PLFELATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPAQGFAIP****
Disordered Region (DISEMBL)
************KSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGELIDMRDFPDGGQDLYIRMSASEIGTRGLVFVTPLWELTKYTDQGAKGKPTTKIVVIVVPTAALLAALILSNISEK********QVQNMDLELPLFELATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPAQGFAIPSVNS
Disordered Region (DISPRO)
*KL*DATPSRVSKSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGELIDMRDFPDGGQDLYIRMSASEIGTRGLVFVTPLWELTKYTDQGAKGKPTTKIVVIVVPTAALLAALILSNISEKTEN*********MDLELPLFELATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPAQGFAIPSVN*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKLPDATPSRVSKSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGELIDMRDFPDGGQDLYIRMSASEIGTRGLVFVTPLWELTKYTDQGAKGKPTTKIVVIVVPTAALLAALILSNISEKTENNRETDQVQNMDLELPLFELATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPAQGFAIPSVNS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	282	2.2.26 [Sep-21-2011]
O81905	850	Receptor-like serine/thre	yes	no	0.726	0.241	0.357	2e-29
Q9S972	847	Receptor-like serine/thre	no	no	0.595	0.198	0.402	2e-29
O81832	783	G-type lectin S-receptor-	no	no	0.716	0.257	0.312	1e-28
Q9ZT07	833	G-type lectin S-receptor-	no	no	0.567	0.192	0.35	6e-26
Q9LPZ3	845	G-type lectin S-receptor-	no	no	0.567	0.189	0.331	3e-25
O81833	815	G-type lectin S-receptor-	no	no	0.776	0.268	0.320	3e-25
Q09092	857	Putative serine/threonine	N/A	no	0.666	0.219	0.305	4e-25
Q39086	843	Receptor-like serine/thre	no	no	0.617	0.206	0.382	8e-24
P0DH86	853	G-type lectin S-receptor-	no	no	0.595	0.196	0.345	2e-21
P0DH87	546	Putative inactive G-type	no	no	0.595	0.307	0.345	4e-21

>sp|O81905|SD18_ARATH Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana GN=SD18 PE=1 SV=1

 Score =  129 bits (325), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/235 (35%), Positives = 120/235 (51%), Gaps = 30/235 (12%)

Query: 1   MKLPDATPSRVSKSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGELIDMRDFPD 60
           MKLPD T + V + I + EC +KCL + +C  + N DIRG GSGC  W GEL D+R++  
Sbjct: 359 MKLPDTTTASVDRGIGVKECEQKCLRDCNCTAFANTDIRGSGSGCVTWTGELFDIRNYAK 418

Query: 61  GGQDLYIRMSASE-----------IGTRGLVFVTPLWELTKYTDQGAKGKPTTKIVVIVV 109
           GGQDLY+R++A++           IG+   V V  L     +     K K +  I   +V
Sbjct: 419 GGQDLYVRLAATDLEDKRNRSAKIIGSSIGVSVLLLLSFIIFFLWKRKQKRSILIETPIV 478

Query: 110 PTAALLAALILSN--ISEKTENNRETDQVQNMDLELPLFELATIANATDNFSINNKLGEG 167
                   L+++   IS +   +RE +     DLELPL E   +A AT+NFS  NKLG+G
Sbjct: 479 DHQLRSRDLLMNEVVISSRRHISRENN---TDDLELPLMEFEEVAMATNNFSNANKLGQG 535

Query: 168 GFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGI-FFARSVTEVAKI 221
           GFG VYK             G  +D + +A + +   SV G   F   V  +A++
Sbjct: 536 GFGIVYK-------------GKLLDGQEMAVKRLSKTSVQGTDEFKNEVKLIARL 577

Involved in the regulation of cellular expansion and differentiation.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q9S972|SD16_ARATH Receptor-like serine/threonine-protein kinase SD1-6 OS=Arabidopsis thaliana GN=SD16 PE=1 SV=2

 Score =  129 bits (324), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 76/189 (40%), Positives = 107/189 (56%), Gaps = 21/189 (11%)

Query: 1   MKLPDATPSRVSKSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGELIDMRDFPD 60
           M+LPD T + V K I L EC E+CL+  +C  + N DIR GGSGC +W G L D+R++  
Sbjct: 357 MRLPDTTETSVDKGIGLKECEERCLKGCNCTAFANTDIRNGGSGCVIWSGGLFDIRNYAK 416

Query: 61  GGQDLYIRMSASE-----------IGTRGLVFVTPLWELTKYTDQGAKGKPT----TKIV 105
           GGQDLY+R++A +           IG+   V +  L     +     K K +    T IV
Sbjct: 417 GGQDLYVRVAAGDLEDKRIKSKKIIGSSIGVSILLLLSFIIFHFWKRKQKRSITIQTPIV 476

Query: 106 VIVVPTAALLAALILSNISEKTENNRETDQVQNMDLELPLFELATIANATDNFSINNKLG 165
            +V    +L+  L+ ++ S  ++ N+ TD      LELPL E   +A AT+NFS +NKLG
Sbjct: 477 DLVRSQDSLMNELVKASRSYTSKENK-TDY-----LELPLMEWKALAMATNNFSTDNKLG 530

Query: 166 EGGFGPVYK 174
           +GGFG VYK
Sbjct: 531 QGGFGIVYK 539

Involved in the regulation of cellular expansion and differentiation.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=3 SV=4

 Score =  126 bits (317), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 128/275 (46%), Gaps = 73/275 (26%)

Query: 1   MKLPDATPSRVSKSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGELIDMRDFPD 60
           +KLPD   S   K+++LNEC++ CL N +C  Y+  DIR GG GC +WFG+LID+R++ +
Sbjct: 355 LKLPDTRTSWYDKNMDLNECKKVCLRNCTCSAYSPFDIRDGGKGCILWFGDLIDIREYNE 414

Query: 61  GGQDLYIRMSASEIGTRGLVFVTPLWELTKYTDQGAKGKPTTKIVVIVVPTAALLAALIL 120
            GQDLY+R+++SEI T                                           L
Sbjct: 415 NGQDLYVRLASSEIET-------------------------------------------L 431

Query: 121 SNISEKTENNRETDQVQNMDLELPLFELATIANATDNFSINNKLGEGGFGPVYKVVAAGI 180
              S +  + ++ ++    DLELP  +L T++ AT  FS  NKLG+GGFGPVYK      
Sbjct: 432 QRESSRVSSRKQEEE----DLELPFLDLDTVSEATSGFSAGNKLGQGGFGPVYK------ 481

Query: 181 CFAGTITGARIDARVVAARIVFAGSVTGI-FFARSVTEVAKIYARSRPRSYPSVVIRPGY 239
              GT+       + VA + +   S  G+  F   +  +AK+  R       ++V   GY
Sbjct: 482 ---GTLAC----GQEVAVKRLSRTSRQGVEEFKNEIKLIAKLQHR-------NLVKILGY 527

Query: 240 KVG-----LILELKPDPDPNPDRLHSSRVRSLQYP 269
            V      LI E +P+   +       R R L +P
Sbjct: 528 CVDEEERMLIYEYQPNKSLDSFIFDKERRRELDWP 562

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9ZT07|RKS1_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 OS=Arabidopsis thaliana GN=RKS1 PE=2 SV=3

 Score =  118 bits (295), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 103/200 (51%), Gaps = 40/200 (20%)

Query: 1   MKLPDATPSRVSKSINLNECREKCLENSSCMVYTNL--DIRGGGSGCAMWFGELIDMRDF 58
           MK+PD + + V  +I L EC+++CL+N SC+ Y +   + + G  GC  W G ++D R +
Sbjct: 350 MKIPDTSDASVDMNITLKECKQRCLKNCSCVAYASAYHESKRGAIGCLKWHGGMLDARTY 409

Query: 59  PDGGQDLYIRMSASEIGTRGLVFVTPLWELTKYTDQGAKGKPTTKIVVIVVPTAALLAAL 118
            + GQD YIR+   E              L ++   G  GK    +++I +  A +L  +
Sbjct: 410 LNSGQDFYIRVDKEE--------------LARWNRNGLSGKRRVLLILISLIAAVMLLTV 455

Query: 119 IL-SNISEKTENNR---------------------ETDQVQNMDLELPLFELATIANATD 156
           IL   + E+ ++NR                     E D+ +N   ELPLF+L TI  AT+
Sbjct: 456 ILFCVVRERRKSNRHRSSSANFAPVPFDFDESFRFEQDKARNR--ELPLFDLNTIVAATN 513

Query: 157 NFSINNKLGEGGFGPVYKVV 176
           NFS  NKLG GGFGPVYK V
Sbjct: 514 NFSSQNKLGAGGFGPVYKGV 533

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LPZ3|Y1141_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410 OS=Arabidopsis thaliana GN=At1g11410 PE=3 SV=3

 Score =  115 bits (288), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 106/205 (51%), Gaps = 45/205 (21%)

Query: 1   MKLPDATPSRVSKSINLNECREKCLENSSCMVYTNL--DIRGGGSGCAMWFGELIDMRDF 58
           +K+P+ +   V  +I L EC ++CL+N SC+ Y +   + + G  GC  W G ++D R +
Sbjct: 353 VKIPNTSAVNVDMNITLKECEQRCLKNCSCVAYASAYHESQDGAKGCLTWHGNMLDTRTY 412

Query: 59  PDGGQDLYIRMSASEIGTRGLVFVTPLWELTKYTDQGAKGKPTTKIVVIVVPTAALLAAL 118
              GQD Y+R+  SE              L ++   GA GK   ++V+I++   A++  L
Sbjct: 413 LSSGQDFYLRVDKSE--------------LARWNGNGASGKK--RLVLILISLIAVVMLL 456

Query: 119 ILS------NISEKTENNR---------------------ETDQVQNMDLELPLFELATI 151
           ++S         ++T++NR                     E  + ++   ELPLFEL+TI
Sbjct: 457 LISFHCYLRKRRQRTQSNRLRKAPSSFAPSSFDLEDSFILEELEDKSRSRELPLFELSTI 516

Query: 152 ANATDNFSINNKLGEGGFGPVYKVV 176
           A AT+NF+  NKLG GGFGPVYK V
Sbjct: 517 ATATNNFAFQNKLGAGGFGPVYKGV 541

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O81833|SD11_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1 OS=Arabidopsis thaliana GN=SD11 PE=1 SV=1

 Score =  115 bits (288), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 118/253 (46%), Gaps = 34/253 (13%)

Query: 1   MKLPDATPSR--VSKSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGELIDMRDF 58
           +KLPD + S       + L +C+ KC  N SC  Y N DIR GG GC +WFG+L+DMR++
Sbjct: 357 LKLPDTSWSWYDAKNEMTLEDCKIKCSSNCSCTAYANTDIREGGKGCLLWFGDLVDMREY 416

Query: 59  PDGGQDLYIRMSASEIGTRGLVFVTPLWELTKYTDQGAKGKPTTKIVVIVVPTAALLAAL 118
              GQD+YIRM  ++I  +G                          VV +     ++ A 
Sbjct: 417 SSFGQDVYIRMGFAKIEFKGR----------------EVVGMVVGSVVAIAVVLVVVFAC 460

Query: 119 ILSNISEKTENNRETDQVQNMDLELPLFELATIANATDNFSINNKLGEGGFGPVYKVVAA 178
               I ++         ++  DL+LP+F+  TI+ ATD+FS  N LG GGFGPVYK    
Sbjct: 461 FRKKIMKRYRGENFRKGIEEEDLDLPIFDRKTISIATDDFSYVNFLGRGGFGPVYK---- 516

Query: 179 GICFAGTITGARIDARVVAARIVFAGSVTGI-FFARSVTEVAKIYARSRPRSYPSVVIRP 237
                    G   D + +A + + A S  G+  F   V  +AK+  R+  R     +   
Sbjct: 517 ---------GKLEDGQEIAVKRLSANSGQGVEEFKNEVKLIAKLQHRNLVRLLGCCI--Q 565

Query: 238 GYKVGLILELKPD 250
           G +  LI E  P+
Sbjct: 566 GEECMLIYEYMPN 578

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q09092|SRK6_BRAOE Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=2

 Score =  115 bits (287), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 121/252 (48%), Gaps = 64/252 (25%)

Query: 1   MKLPDATPSRVSKSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGELIDMRDFPD 60
           MKLP+ T + V +SI + EC+++C+ + +C  + N DIR GGSGC +W   L D+R++  
Sbjct: 361 MKLPETTMATVDRSIGVKECKKRCISDCNCTAFANADIRNGGSGCVIWTERLEDIRNYAT 420

Query: 61  ---GGQDLYIRMSASEIGTRGLVFVTPLWELTKYTDQGAKGKPTTKIVVIVVPTAALLAA 117
               GQDLY+R++A++I  +                + A G    KI+ + V  + LL  
Sbjct: 421 DAIDGQDLYVRLAAADIAKK----------------RNASG----KIISLTVGVSVLLLL 460

Query: 118 LILSNISEKTENNR-------ETDQVQNM--------------------DLELPLFELAT 150
           ++      K +  +        T + QN+                    +LELPL E+ T
Sbjct: 461 IMFCLWKRKQKRAKASAISIANTQRNQNLPMNEMVLSSKREFSGEYKFEELELPLIEMET 520

Query: 151 IANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGI- 209
           +  AT+NFS  NKLG+GGFG VYK             G  +D + +A + +   SV G  
Sbjct: 521 VVKATENFSSCNKLGQGGFGIVYK-------------GRLLDGKEIAVKRLSKTSVQGTD 567

Query: 210 FFARSVTEVAKI 221
            F   VT +A++
Sbjct: 568 EFMNEVTLIARL 579

Involved in sporophytic self-incompatibility system (the inability of flowering plants to achieve self-fertilization), probably acting in combination with S-locus-specific glycoproteins. Interaction with a ligand in the extracellular domain triggers the protein kinase activity of the cytoplasmic domain.

Brassica oleracea var. acephala (taxid: 3713)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q39086|SD17_ARATH Receptor-like serine/threonine-protein kinase SD1-7 OS=Arabidopsis thaliana GN=SD17 PE=1 SV=1

 Score =  110 bits (276), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 70/183 (38%), Positives = 104/183 (56%), Gaps = 9/183 (4%)

Query: 1   MKLPDATPSRVSKSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGELIDMRDFPD 60
           MKLPD T + V + I L  C+E+CLE+ +C  + N DIR GGSGC +W  E++DMR++  
Sbjct: 353 MKLPDTTATIVDREIGLKVCKERCLEDCNCTAFANADIRNGGSGCVIWTREILDMRNYAK 412

Query: 61  GGQDLYIRMSASEIGTRGL---------VFVTPLWELTKYTDQGAKGKPTTKIVVIVVPT 111
           GGQDLY+R++A+E+  + +         + V+ L  L+       K K    I +     
Sbjct: 413 GGQDLYVRLAAAELEDKRIKNEKIIGSSIGVSILLLLSFVIFHFWKRKQKRSITIQTPNV 472

Query: 112 AALLAALILSNISEKTENNRETDQVQNMDLELPLFELATIANATDNFSINNKLGEGGFGP 171
             + +   L N    +     + + ++  LELPL EL  +A AT+NFS +NKLG+GGFG 
Sbjct: 473 DQVRSQDSLINDVVVSRRGYTSKEKKSEYLELPLLELEALATATNNFSNDNKLGQGGFGI 532

Query: 172 VYK 174
           VYK
Sbjct: 533 VYK 535

Involved in the regulation of cellular expansion and differentiation. Mediates subcellular relocalization of PUB9 from nucleus to plasma membrane in a protein-phosphorylation-dependent manner. May be involved in the abscisic acid-mediated signaling pathway, at least during germination.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P0DH86|SRK_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SRK OS=Arabidopsis thaliana GN=SRK PE=2 SV=1

 Score =  102 bits (255), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/188 (34%), Positives = 96/188 (51%), Gaps = 20/188 (10%)

Query: 1   MKLPDATPSRVSKSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGELIDMRDFPD 60
           MK+P  T + V K I L EC EKC  + +C  Y N DIR GGSGC +W GE  D+R++  
Sbjct: 359 MKIPATTAAIVDKRIGLKECEEKCKTHCNCTAYANSDIRNGGSGCIIWIGEFRDIRNYAA 418

Query: 61  GGQDLYIRMSASEIGTR--------------GLVFVTPLWELTKYTDQGAKGKPTTKIVV 106
            GQDL++R++A+E G R               L+ V        +  +  + + T     
Sbjct: 419 DGQDLFVRLAAAEFGERRTIRGKIIGLIIGISLMLVLSFIIYCFWKKKQKRARATAA--- 475

Query: 107 IVVPTAALLAALILSNISEKTENNRETDQVQNMDLELPLFELATIANATDNFSINNKLGE 166
             +     +  LI++N    +   R   + ++++L L  FE  T+  AT+NFS +N LG 
Sbjct: 476 -PIGYRDRIQELIITNGVVMSSGRRLLGEEEDLELPLTEFE--TVVMATENFSDSNILGR 532

Query: 167 GGFGPVYK 174
           GGFG VYK
Sbjct: 533 GGFGIVYK 540

Female specificity determinant of self-incompatibility.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P0DH87|PSRK_ARATH Putative inactive G-type lectin S-receptor-like serine/threonine-protein kinase SRK OS=Arabidopsis thaliana GN=PSEUDOSRKA PE=5 SV=1

 Score =  102 bits (254), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 65/188 (34%), Positives = 96/188 (51%), Gaps = 20/188 (10%)

Query: 1   MKLPDATPSRVSKSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGELIDMRDFPD 60
           MK+P  T + V K I L EC EKC  + +C  Y N DIR GGSGC +W GE  D+R++  
Sbjct: 359 MKIPATTAAIVDKRIGLKECEEKCKTHCNCTAYANSDIRNGGSGCIIWIGEFRDIRNYAA 418

Query: 61  GGQDLYIRMSASEIGTR--------------GLVFVTPLWELTKYTDQGAKGKPTTKIVV 106
            GQDL++R++A+E G R               L+ V        +  +  + + T     
Sbjct: 419 DGQDLFVRLAAAEFGERRTIRGKIIGLIIGISLMLVLSFIIYCFWKKKQKRARATAA--- 475

Query: 107 IVVPTAALLAALILSNISEKTENNRETDQVQNMDLELPLFELATIANATDNFSINNKLGE 166
             +     +  LI++N    +   R   + ++++L L  FE  T+  AT+NFS +N LG 
Sbjct: 476 -PIGYRDRIQELIITNGVVMSSGRRLLGEEEDLELPLTEFE--TVVMATENFSDSNILGR 532

Query: 167 GGFGPVYK 174
           GGFG VYK
Sbjct: 533 GGFGIVYK 540

Truncated and inactivated form of SRK, the female specificity determinant of self-incompatibility when active. Most A.thaliana cultivars contain such an inactive form and thus, are self-fertiles.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	282
224115136	843	predicted protein [Populus trichocarpa]	0.549	0.183	0.497	6e-41
224115138	500	predicted protein [Populus trichocarpa]	0.450	0.254	0.5	6e-38
302143165	657	unnamed protein product [Vitis vinifera]	0.716	0.307	0.420	7e-38
356533039	859	PREDICTED: G-type lectin S-receptor-like	0.826	0.271	0.373	1e-37
224126243	836	predicted protein [Populus trichocarpa]	0.719	0.242	0.420	2e-37
224122810	810	predicted protein [Populus trichocarpa]	0.687	0.239	0.398	9e-37
356514897	821	PREDICTED: G-type lectin S-receptor-like	0.556	0.191	0.450	3e-36
224113157	786	predicted protein [Populus trichocarpa]	0.443	0.159	0.471	4e-36
224122858	831	predicted protein [Populus trichocarpa]	0.684	0.232	0.387	7e-36
224113153	785	predicted protein [Populus trichocarpa]	0.439	0.157	0.465	1e-35

>gi|224115136|ref|XP_002316951.1| predicted protein [Populus trichocarpa] gi|222860016|gb|EEE97563.1| predicted protein [Populus trichocarpa]

 Score =  174 bits (440), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 95/191 (49%), Positives = 115/191 (60%), Gaps = 36/191 (18%)

Query: 1   MKLPDATPSRVSKSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGELIDMRDFPD 60
           +KLPDAT S V+K +NL EC+ KCL N SCM Y+NLDIRGGGSGCA WFG+L+D+R  P 
Sbjct: 352 LKLPDATHSWVNKDMNLKECKAKCLGNCSCMAYSNLDIRGGGSGCANWFGDLMDIRLVPG 411

Query: 61  GGQDLYIRMSASEIGTRGLVFVTPLWELTKYTDQGAKGKPTTKIVVIVVPTAAL-LAALI 119
           GGQ+LYIRM ASEIG R                   + K   KI  I      L L  L 
Sbjct: 412 GGQELYIRMHASEIGDR-------------------EAKANMKIAAIATAVVGLILGTLT 452

Query: 120 LS-------------NISEKTENNRETDQV---QNMDLELPLFELATIANATDNFSINNK 163
           +S               SE+TEN+ + D     Q  D+ELPLF  + IA+AT+NFS+NNK
Sbjct: 453 ISYHVSKEKAKSAENTSSERTENDWKNDTNNGGQKEDMELPLFAFSAIADATNNFSVNNK 512

Query: 164 LGEGGFGPVYK 174
           LGEGGFGPVY+
Sbjct: 513 LGEGGFGPVYR 523

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224115138|ref|XP_002316952.1| predicted protein [Populus trichocarpa] gi|222860017|gb|EEE97564.1| predicted protein [Populus trichocarpa]

 Score =  163 bits (413), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 87/174 (50%), Positives = 102/174 (58%), Gaps = 47/174 (27%)

Query: 1   MKLPDATPSRVSKSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGELIDMRDFPD 60
           +K+PDAT S V+K++NL ECR KCL+N SCM YTNLDIRG GSGCA+WFG+LID+R  P 
Sbjct: 80  LKVPDATDSWVNKTMNLKECRAKCLQNCSCMAYTNLDIRGRGSGCAIWFGDLIDIRQVPI 139

Query: 61  GGQDLYIRMSASEIGTRGLVFVTPLWELTKYTDQGAKGKPTTKIVVIVVPTAALLAALIL 120
           GGQ LY+R+ ASEI                     AK KP  +I                
Sbjct: 140 GGQTLYVRLHASEI--------------------EAKAKPKIRIA--------------- 164

Query: 121 SNISEKTENNRETDQVQNMDLELPLFELATIANATDNFSINNKLGEGGFGPVYK 174
                        D+ +  DLELPLFE   IANAT NFSINNKLGEGG+GPVYK
Sbjct: 165 ------------KDKGKKEDLELPLFEFTAIANATSNFSINNKLGEGGYGPVYK 206

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143165|emb|CBI20460.3| unnamed protein product [Vitis vinifera]

 Score =  163 bits (413), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 95/226 (42%), Positives = 128/226 (56%), Gaps = 24/226 (10%)

Query: 1   MKLPDATPSRVSKSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGELIDMRDFPD 60
           +KLPD   S  ++S+NL EC   CL N SC  YTN DIRGGGSGC +WFG+LID+R++ +
Sbjct: 193 VKLPDTRNSWFNESMNLKECASLCLGNCSCTAYTNSDIRGGGSGCLLWFGDLIDIREYTE 252

Query: 61  GGQDLYIRMSASEIGTRGLVFVTPLWELTKYTDQGAKGKPTTKIVVIVVPTAALLAALIL 120
            GQD YIRM+ SE+           + +T    +GAK K      V +V    L   L L
Sbjct: 253 NGQDFYIRMAKSELDA---------FAMTNSGSKGAKRKWVIVSTVSIVGIILLSLVLTL 303

Query: 121 SNISEKTENNRETDQVQNMDLELPLFELATIANATDNFSINNKLGEGGFGPVYKVVAAGI 180
             + +K    +E ++ +  DLELPLF+L TI NATDNFS +NKLGEGGFGPVYK      
Sbjct: 304 YVLRKKRLRRKEINEREE-DLELPLFDLDTILNATDNFSNDNKLGEGGFGPVYK------ 356

Query: 181 CFAGTITGARIDARVVAARIVFAGSVTGI-FFARSVTEVAKIYARS 225
                  G   D + +A + +   S  G+  F   VT ++K+  R+
Sbjct: 357 -------GMLQDGKEIAVKRLSKESRQGLDEFKNEVTHISKLQHRN 395

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356533039|ref|XP_003535076.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max]

 Score =  162 bits (411), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/281 (37%), Positives = 146/281 (51%), Gaps = 48/281 (17%)

Query: 1   MKLPDATPSRVSKSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGELIDMRDFPD 60
           MKLP+ T S V++SI L ECR KCLEN SC  Y+NLD RGGGSGC++W GEL+DMRD   
Sbjct: 396 MKLPNTTFSWVNESITLEECRAKCLENCSCTAYSNLDTRGGGSGCSIWVGELVDMRDVK- 454

Query: 61  GGQDLYIRMSASEIGTRGLVFVTPLWELTKYTDQGAKGKPTTKIVVIVVPTAALLAALIL 120
            GQDLY+R++ S                    D   K +   K++++V  T +L+  ++L
Sbjct: 455 SGQDLYVRIATS--------------------DPDGKHERQKKVILVVAITVSLVLVMLL 494

Query: 121 S----NISEKTENNRE-------TDQVQNMDLELPLFELATIANATDNFSINNKLGEGGF 169
           +     I +K +   E        DQ    DLELP F+LATI  AT+NFSINNKLGEGGF
Sbjct: 495 AFCVYMIKKKYKGKTEIRMSIEQKDQGGQEDLELPFFDLATIITATNNFSINNKLGEGGF 554

Query: 170 GPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPR 228
           GPVYK             G  +D + +A + +   S  G+  F   V   AK+  R+  +
Sbjct: 555 GPVYK-------------GLLVDEQEIAIKRLSRSSGQGLKEFRNEVILCAKLQHRNLVK 601

Query: 229 SYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYP 269
                +   G +  L+ E  P+   +    +S   + L +P
Sbjct: 602 VLGYCI--EGEEKMLVYEYMPNKSLDLILFNSVESKFLDWP 640

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224126243|ref|XP_002319790.1| predicted protein [Populus trichocarpa] gi|222858166|gb|EEE95713.1| predicted protein [Populus trichocarpa]

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/245 (42%), Positives = 137/245 (55%), Gaps = 42/245 (17%)

Query: 1   MKLPDATPSRVSKSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGELIDMRDFPD 60
           +KLPDAT S V+K++NL ECR KCL+N SCM YT  DI+   SGCA+WFG+LID+R FPD
Sbjct: 351 LKLPDATNSWVNKTMNLKECRSKCLQNCSCMAYTATDIKER-SGCAIWFGDLIDIRQFPD 409

Query: 61  GGQDLYIRMSASE-----------IGTRGLVFVTPLWELTKYT----DQGAKGKPTTKIV 105
           GGQ++YIRM+ASE           +G    +FV     L  Y      +  K   +  +V
Sbjct: 410 GGQEIYIRMNASESSECLSLIKMEMGIALSIFVACGMLLVAYYIFKRTEKLKAHYSFLLV 469

Query: 106 VIVVPTAALLAALILSNISEKTENNRE-TDQVQN---MDLELPLFELATIANATDNFSIN 161
             V  + +LL        SEKT  NRE  DQ+ +    D+ELPLF+  TIA AT+ FS+N
Sbjct: 470 YHVCDSHSLL--------SEKTGGNREENDQIDSGPMEDMELPLFQFTTIAKATNGFSLN 521

Query: 162 NKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF-FARSVTEVAK 220
           NK+GEGGFGPVYK             G   D + +A + +   S  G+  F   V  + K
Sbjct: 522 NKIGEGGFGPVYK-------------GTLEDGQEIAVKTLSRSSGQGLNEFKNEVILITK 568

Query: 221 IYARS 225
           +  R+
Sbjct: 569 LQHRN 573

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224122810|ref|XP_002330369.1| predicted protein [Populus trichocarpa] gi|222871754|gb|EEF08885.1| predicted protein [Populus trichocarpa]

 Score =  159 bits (403), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 92/231 (39%), Positives = 127/231 (54%), Gaps = 37/231 (16%)

Query: 2   KLPDATPSRVSKSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGELIDMRDFPDG 61
           KLPD + S   KSI+L EC   CL+N SC  YTNLD R GGSGC +WFG+LIDMR     
Sbjct: 348 KLPDTSTSSFDKSIDLKECERLCLKNCSCTAYTNLDFRAGGSGCLIWFGDLIDMRRSTGD 407

Query: 62  GQDLYIRMSASEIGTRGLVFVTPLWELTKYTDQGAKGKPTTKIVVIVVPTAA------LL 115
           GQD+Y+R++ASE+G                     K   +TK+   ++ +AA      LL
Sbjct: 408 GQDVYVRVAASELGA-----------------NAKKRNLSTKLKAGIIASAAALGMGMLL 450

Query: 116 AALILSNISEKTENNRETDQVQNMDLELPLFELATIANATDNFSINNKLGEGGFGPVYKV 175
           A ++          N   ++V+  D+ELP+ +L+TIA+ATDNFS +NKLGEGGFGPVYK 
Sbjct: 451 AGMMFCRRRRNLGKNDRLEEVRKEDIELPIVDLSTIAHATDNFSSSNKLGEGGFGPVYK- 509

Query: 176 VAAGICFAGTITGARIDARVVAARIVFAGSVTGI-FFARSVTEVAKIYARS 225
                       G  I+ + +A + +   SV G+  F   V  +AK+  R+
Sbjct: 510 ------------GILIEGQEIAVKSLSKSSVQGMDEFKNEVKFIAKLQHRN 548

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356514897|ref|XP_003526138.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max]

 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 82/182 (45%), Positives = 111/182 (60%), Gaps = 25/182 (13%)

Query: 1   MKLPDATPSRVSKSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGELIDMRDFPD 60
           +K PD   S V+ S+ L EC+ KC EN SCM Y N DIRG GSGCA+WFG+L+D+R   +
Sbjct: 356 VKAPDTERSWVNASMTLEECKHKCTENCSCMAYANSDIRGEGSGCAIWFGDLLDIRLMSN 415

Query: 61  GGQDLYIRMSASEIGTRGLVFVTPLWELTKYTDQGAKGKPTTKIVVIVVPTAALLAALIL 120
            GQDLYIR++ SE               T + DQ  K     K+VVI    ++++A L++
Sbjct: 416 AGQDLYIRLAMSE---------------TAHQDQDEKDSSKKKVVVIASSISSVIAMLLI 460

Query: 121 --------SNISEKTENNRETDQVQNMDLELPLFELATIANATDNFSINNKLGEGGFGPV 172
                   +N + + E  +  +Q Q  D ELPLF+LA++A+AT NFS + KLGEGGFGPV
Sbjct: 461 FIFIYWRYTNKNNEIEGTK--NQSQQEDFELPLFDLASVAHATSNFSNDKKLGEGGFGPV 518

Query: 173 YK 174
           YK
Sbjct: 519 YK 520

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224113157|ref|XP_002332644.1| predicted protein [Populus trichocarpa] gi|222832839|gb|EEE71316.1| predicted protein [Populus trichocarpa]

 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 82/174 (47%), Positives = 100/174 (57%), Gaps = 49/174 (28%)

Query: 1   MKLPDATPSRVSKSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGELIDMRDFPD 60
           +K PDAT S ++KS+NLNECR KCL+N SCM Y+N D+RGGGSGC +W+G+LID+R FP 
Sbjct: 361 LKWPDATHSWLNKSMNLNECRAKCLQNCSCMAYSNSDVRGGGSGCIIWYGDLIDIRQFPA 420

Query: 61  GGQDLYIRMSASEIGTRGLVFVTPLWELTKYTDQGAKGKPTTKIVVIVVPTAALLAALIL 120
           GGQ+LYIRM+ SE             E+ +  DQ   G                      
Sbjct: 421 GGQELYIRMNPSESA-----------EMDQQNDQITDG---------------------- 447

Query: 121 SNISEKTENNRETDQVQNMDLELPLFELATIANATDNFSINNKLGEGGFGPVYK 174
                           +N DLELP FE A I NAT+NFSI NKLG+GGFGPVYK
Sbjct: 448 ----------------ENEDLELPQFEFAKIVNATNNFSIKNKLGQGGFGPVYK 485

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224122858|ref|XP_002330381.1| predicted protein [Populus trichocarpa] gi|222871766|gb|EEF08897.1| predicted protein [Populus trichocarpa]

 Score =  157 bits (396), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 95/245 (38%), Positives = 133/245 (54%), Gaps = 52/245 (21%)

Query: 1   MKLPDATPSRVSKSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGELIDMRDFPD 60
           +K+PD   S  +K+INL EC E CL+N SC  Y NLD+R GGSGC +WFG+LID+R + +
Sbjct: 357 IKVPDTRKSWYNKTINLEECEEVCLKNCSCTAYANLDVRDGGSGCVLWFGDLIDIRQYNE 416

Query: 61  GGQDLYIRMSASEIGTRGLVFVTPLWELTKYTDQGAKGKPTTKIVVIVVPTAAL---LAA 117
            GQD+YIR++AS I                  D+  K +   ++ +IV+P + +   L A
Sbjct: 417 NGQDIYIRIAASVI------------------DKPVKSRGKKRVRIIVIPVSLVAFSLLA 458

Query: 118 LIL----------------SNISEKTENNRETDQVQNMDLELPLFELATIANATDNFSIN 161
           L L                 N+    E +R T + +N DLELPLF+LAT+ +AT+ FSIN
Sbjct: 459 LCLFLRFLRKNKQQQLTREGNVVTNPEQDR-TKESRNEDLELPLFDLATLTDATNCFSIN 517

Query: 162 NKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF-FARSVTEVAK 220
           NKLG+GGFGPVYK             G   D + +A + +   S  GI  F   V  +AK
Sbjct: 518 NKLGQGGFGPVYK-------------GILQDGQEIAVKRLSKRSRQGINEFRNEVVCIAK 564

Query: 221 IYARS 225
           +  R+
Sbjct: 565 LQHRN 569

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224113153|ref|XP_002332643.1| predicted protein [Populus trichocarpa] gi|222832838|gb|EEE71315.1| predicted protein [Populus trichocarpa]

 Score =  156 bits (394), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 81/174 (46%), Positives = 98/174 (56%), Gaps = 50/174 (28%)

Query: 1   MKLPDATPSRVSKSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGELIDMRDFPD 60
           +K PDAT S ++KS+NLNECR KCL+N SCM Y+N D+RGGGSGC +W+G LID+R FP 
Sbjct: 361 LKWPDATHSWLNKSMNLNECRAKCLQNCSCMAYSNSDVRGGGSGCIIWYGGLIDIRQFPA 420

Query: 61  GGQDLYIRMSASEIGTRGLVFVTPLWELTKYTDQGAKGKPTTKIVVIVVPTAALLAALIL 120
           GGQ+LYIRM+ SE                                               
Sbjct: 421 GGQELYIRMNPSE----------------------------------------------- 433

Query: 121 SNISEKTENNRETDQVQNMDLELPLFELATIANATDNFSINNKLGEGGFGPVYK 174
              SE  + N +    +N DLELP FE A I NAT+NFSI NKLG+GGFGPVYK
Sbjct: 434 ---SEMDQQNDQITDGENEDLELPQFEFAKIVNATNNFSIENKLGQGGFGPVYK 484

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	282
TAIR|locus:2131684	783	AT4G27290 [Arabidopsis thalian	0.269	0.097	0.513	4.8e-30
TAIR|locus:2018546	843	RK1 "receptor kinase 1" [Arabi	0.262	0.087	0.513	2.3e-28
TAIR|locus:2141181	850	RK3 "receptor kinase 3" [Arabi	0.262	0.087	0.5	8e-28
TAIR|locus:2018506	847	RK2 "receptor kinase 2" [Arabi	0.262	0.087	0.5	4.4e-27
TAIR|locus:2131694	815	AT4G27300 [Arabidopsis thalian	0.276	0.095	0.462	1.3e-25
TAIR|locus:2197744	807	AT1G61420 [Arabidopsis thalian	0.202	0.070	0.409	8.5e-15
TAIR|locus:2141176	849	B120 [Arabidopsis thaliana (ta	0.244	0.081	0.394	8.7e-15
TAIR|locus:2197709	809	AT1G61480 [Arabidopsis thalian	0.524	0.182	0.314	2e-14
TAIR|locus:2200151	830	SD1-13 "S-domain-1 13" [Arabid	0.248	0.084	0.402	2.1e-14
TAIR|locus:2197664	804	AT1G61490 [Arabidopsis thalian	0.244	0.085	0.36	1.8e-12

TAIR|locus:2131684 AT4G27290 [Arabidopsis thaliana (taxid:3702)]

 Score = 236 (88.1 bits), Expect = 4.8e-30, Sum P(2) = 4.8e-30
 Identities = 39/76 (51%), Positives = 57/76 (75%)

Query:     1 MKLPDATPSRVSKSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGELIDMRDFPD 60
             +KLPD   S   K+++LNEC++ CL N +C  Y+  DIR GG GC +WFG+LID+R++ +
Sbjct:   355 LKLPDTRTSWYDKNMDLNECKKVCLRNCTCSAYSPFDIRDGGKGCILWFGDLIDIREYNE 414

Query:    61 GGQDLYIRMSASEIGT 76
              GQDLY+R+++SEI T
Sbjct:   415 NGQDLYVRLASSEIET 430

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0048765 "root hair cell differentiation" evidence=RCA

TAIR|locus:2018546 RK1 "receptor kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 232 (86.7 bits), Expect = 2.3e-28, Sum P(2) = 2.3e-28
 Identities = 38/74 (51%), Positives = 55/74 (74%)

Query:     1 MKLPDATPSRVSKSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGELIDMRDFPD 60
             MKLPD T + V + I L  C+E+CLE+ +C  + N DIR GGSGC +W  E++DMR++  
Sbjct:   353 MKLPDTTATIVDREIGLKVCKERCLEDCNCTAFANADIRNGGSGCVIWTREILDMRNYAK 412

Query:    61 GGQDLYIRMSASEI 74
             GGQDLY+R++A+E+
Sbjct:   413 GGQDLYVRLAAAEL 426

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0009875 "pollen-pistil interaction" evidence=TAS

GO:0016020 "membrane" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0019199 "transmembrane receptor protein kinase activity" evidence=ISS

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

TAIR|locus:2141181 RK3 "receptor kinase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 230 (86.0 bits), Expect = 8.0e-28, Sum P(2) = 8.0e-28
 Identities = 37/74 (50%), Positives = 53/74 (71%)

Query:     1 MKLPDATPSRVSKSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGELIDMRDFPD 60
             MKLPD T + V + I + EC +KCL + +C  + N DIRG GSGC  W GEL D+R++  
Sbjct:   359 MKLPDTTTASVDRGIGVKECEQKCLRDCNCTAFANTDIRGSGSGCVTWTGELFDIRNYAK 418

Query:    61 GGQDLYIRMSASEI 74
             GGQDLY+R++A+++
Sbjct:   419 GGQDLYVRLAATDL 432

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

GO:0005773 "vacuole" evidence=IDA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=RCA

TAIR|locus:2018506 RK2 "receptor kinase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 226 (84.6 bits), Expect = 4.4e-27, Sum P(2) = 4.4e-27
 Identities = 37/74 (50%), Positives = 52/74 (70%)

Query:     1 MKLPDATPSRVSKSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGELIDMRDFPD 60
             M+LPD T + V K I L EC E+CL+  +C  + N DIR GGSGC +W G L D+R++  
Sbjct:   357 MRLPDTTETSVDKGIGLKECEERCLKGCNCTAFANTDIRNGGSGCVIWSGGLFDIRNYAK 416

Query:    61 GGQDLYIRMSASEI 74
             GGQDLY+R++A ++
Sbjct:   417 GGQDLYVRVAAGDL 430

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0034613 "cellular protein localization" evidence=IGI

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

TAIR|locus:2131694 AT4G27300 [Arabidopsis thaliana (taxid:3702)]

 Score = 205 (77.2 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
 Identities = 37/80 (46%), Positives = 51/80 (63%)

Query:     1 MKLPDATPS--RVSKSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGELIDMRDF 58
             +KLPD + S       + L +C+ KC  N SC  Y N DIR GG GC +WFG+L+DMR++
Sbjct:   357 LKLPDTSWSWYDAKNEMTLEDCKIKCSSNCSCTAYANTDIREGGKGCLLWFGDLVDMREY 416

Query:    59 PDGGQDLYIRMSASEIGTRG 78
                GQD+YIRM  ++I  +G
Sbjct:   417 SSFGQDVYIRMGFAKIEFKG 436

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=RCA

TAIR|locus:2197744 AT1G61420 [Arabidopsis thaliana (taxid:3702)]

 Score = 138 (53.6 bits), Expect = 8.5e-15, Sum P(2) = 8.5e-15
 Identities = 25/61 (40%), Positives = 39/61 (63%)

Query:    15 INLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGELIDMRDFPDGGQDLYIRMSASEI 74
             +N+ EC++ CL N SC+ +  +D    G GC MW  +L+D   F +GG+ L IR++ SE+
Sbjct:   363 VNVEECQKSCLHNCSCLAFAYID----GIGCLMWNQDLMDAVQFSEGGELLSIRLARSEL 418

Query:    75 G 75
             G
Sbjct:   419 G 419

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

TAIR|locus:2141176 B120 [Arabidopsis thaliana (taxid:3702)]

 Score = 148 (57.2 bits), Expect = 8.7e-15, Sum P(2) = 8.7e-15
 Identities = 30/76 (39%), Positives = 46/76 (60%)

Query:     1 MKLPD-ATPSRVSKSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGELIDMRDFP 59
             +KLPD   P      ++  +CRE+CL N SC  Y+ +    GG GC +W  +L+D++ F 
Sbjct:   363 VKLPDFEIPEH--NLVDPEDCRERCLRNCSCNAYSLV----GGIGCMIWNQDLVDLQQFE 416

Query:    60 DGGQDLYIRMSASEIG 75
              GG  L+IR++ SE+G
Sbjct:   417 AGGSSLHIRLADSEVG 432

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0006979 "response to oxidative stress" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2197709 AT1G61480 [Arabidopsis thaliana (taxid:3702)]

 Score = 196 (74.1 bits), Expect = 2.0e-14, P = 2.0e-14
 Identities = 51/162 (31%), Positives = 74/162 (45%)

Query:    15 INLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGELIDMRDFPDGGQDLYIRMSASEI 74
             ++   C + CL N SC+ +  ++    G GC MW  +L+D   F  GG+ L IR+++SE+
Sbjct:   363 VDAEGCYQICLHNCSCLAFAYIN----GIGCLMWNQDLMDAVQFSAGGEILSIRLASSEL 418

Query:    75 G--TRGLVFVTPLWELTKYTDQGAKGXXXXXXXXXXXXXXXXXXXXXXXXXSEKTENNRE 132
             G   R  + V  +  L+ +                                 E   N+ E
Sbjct:   419 GGNKRNKIIVASIVSLSLFVILA----FAAFCFLRYKVKHTVSAKISKIASKEAWNNDLE 474

Query:   133 TDQVQNMDLELPLFELATIANATDNFSINNKLGEGGFGPVYK 174
                V      L  FE+ TI  ATDNFS++NKLG+GGFG VYK
Sbjct:   475 PQDVSG----LKFFEMNTIQTATDNFSLSNKLGQGGFGSVYK 512

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

TAIR|locus:2200151 SD1-13 "S-domain-1 13" [Arabidopsis thaliana (taxid:3702)]

 Score = 131 (51.2 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
 Identities = 31/77 (40%), Positives = 41/77 (53%)

Query:     1 MKLPDATPSRVSKSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGELIDMRDFPD 60
             MK+P   P R     N  +C E CL+N SC  Y+  D    G GC +W G L+DM++F  
Sbjct:   361 MKVPH-NPQR--SGANEQDCPESCLKNCSCTAYS-FD---RGIGCLLWSGNLMDMQEFSG 413

Query:    61 GGQDLYIRMSASEIGTR 77
              G   YIR++ SE   R
Sbjct:   414 TGVVFYIRLADSEFKKR 430

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=RCA;IDA

GO:0009637 "response to blue light" evidence=RCA

GO:0010155 "regulation of proton transport" evidence=RCA

GO:0016556 "mRNA modification" evidence=RCA

TAIR|locus:2197664 AT1G61490 [Arabidopsis thaliana (taxid:3702)]

 Score = 125 (49.1 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
 Identities = 27/75 (36%), Positives = 40/75 (53%)

Query:     1 MKLPDATPSRVSKSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGELIDMRDFPD 60
             +KLPD        S++  EC + CL N SC+ +  +     G GC +W   L+D   F  
Sbjct:   351 VKLPDFY--EYESSVDAEECHQSCLHNCSCLAFAYIH----GIGCLIWNQNLMDAVQFSA 404

Query:    61 GGQDLYIRMSASEIG 75
             GG+ L IR++ SE+G
Sbjct:   405 GGEILSIRLAHSELG 419

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.254.15.1 annotation not avaliable (816 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	282
pfam08276	66	pfam08276, PAN_2, PAN-like domain	8e-22
cd01098	84	cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain	8e-20
smart00473	78	smart00473, PAN_AP, divergent subfamily of APPLE d	5e-11

>gnl|CDD|219774 pfam08276, PAN_2, PAN-like domain

 Score = 85.8 bits (213), Expect = 8e-22
 Identities = 32/55 (58%), Positives = 38/55 (69%), Gaps = 1/55 (1%)

Query: 1  MKLPDATPSRVSKSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGELIDM 55
          MKLPD T + V +SI L EC ++CL N SC  Y   DIR GGSGC +W GEL+DM
Sbjct: 13 MKLPDTTAAIVDRSIGLKECEQRCLSNCSCTAYAYADIR-GGSGCLIWTGELVDM 66

Length = 66

>gnl|CDD|238531 cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins

 Score = 81.3 bits (201), Expect = 8e-20
 Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 5/68 (7%)

Query: 1  MKLPDATPSRVSKSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGELIDMRDFPD 60
          +KLPD   +    +I+L ECRE CL N SC  Y       G  GC +W G L ++R    
Sbjct: 20 VKLPDN--ASAITAISLEECREACLSNCSCTAYAY---NNGSGGCLLWNGLLNNLRSLSS 74

Query: 61 GGQDLYIR 68
          GG  LY+R
Sbjct: 75 GGGTLYLR 82

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization. Length = 84

>gnl|CDD|214680 smart00473, PAN_AP, divergent subfamily of APPLE domains

 Score = 57.6 bits (139), Expect = 5e-11
 Identities = 28/70 (40%), Positives = 33/70 (47%), Gaps = 6/70 (8%)

Query: 1  MKLPDATPSRVSKSINLNECREKCLE-NSSCMVYTNLDIRGGGSGCAMW-FGELIDMRDF 58
           KLP  +   V    +L EC  KCL  N SC  +T      G  GC +W    L D R F
Sbjct: 12 TKLPGFSRI-VISVASLEECASKCLNSNCSCRSFTY---NNGTKGCLLWSESSLGDARLF 67

Query: 59 PDGGQDLYIR 68
          P GG DLY +
Sbjct: 68 PSGGVDLYEK 77

Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions. Length = 78

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	282
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.91
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.7
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.67
PF08276	66	PAN_2: PAN-like domain; InterPro: IPR013227 PAN do	99.57
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.56
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.56
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.55
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.53
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.51
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.47
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.47
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.4
cd00129	80	PAN_APPLE PAN/APPLE-like domain; present in N-term	99.4
cd01098	84	PAN_AP_plant Plant PAN/APPLE-like domain; present	99.36
KOG3653	534	consensus Transforming growth factor beta/activin	99.35
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.33
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.31
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.3
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.28
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.28
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.28
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.24
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.23
PHA02988	283	hypothetical protein; Provisional	99.22
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.21
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.21
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.2
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.2
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.19
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.18
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.18
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.17
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.17
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.16
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.16
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.14
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.14
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.14
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.14
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.13
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.13
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.13
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.12
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.11
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.11
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.11
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.1
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.1
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.09
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.09
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.09
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.08
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.08
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.08
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.08
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.08
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.08
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.07
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.07
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.07
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.06
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.06
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.06
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.06
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.06
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.06
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.06
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.06
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.06
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.05
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.05
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.05
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.05
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.05
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.04
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.04
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.04
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.04
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.04
KOG0605	550	consensus NDR and related serine/threonine kinases	99.04
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.03
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.03
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.03
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.03
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.03
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.03
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.03
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.02
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.02
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.02
KOG0586	596	consensus Serine/threonine protein kinase [General	99.01
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.01
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.01
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.01
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.01
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.01
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.01
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.01
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.01
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.01
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.01
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.0
KOG0198	313	consensus MEKK and related serine/threonine protei	98.99
KOG0598	357	consensus Ribosomal protein S6 kinase and related	98.99
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	98.99
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	98.99
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	98.99
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	98.98
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	98.98
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	98.98
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	98.98
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	98.98
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	98.98
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	98.98
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	98.97
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	98.97
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	98.97
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	98.97
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	98.97
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	98.97
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	98.97
PTZ00267	478	NIMA-related protein kinase; Provisional	98.97
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	98.97
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	98.96
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	98.96
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	98.96
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	98.96
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	98.96
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	98.96
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	98.96
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	98.96
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	98.96
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	98.96
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	98.96
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	98.96
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	98.96
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	98.95
KOG0583	370	consensus Serine/threonine protein kinase [Signal	98.95
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	98.95
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	98.95
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	98.95
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	98.95
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	98.95
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	98.95
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	98.95
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	98.95
KOG0578	550	consensus p21-activated serine/threonine protein k	98.94
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	98.94
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	98.94
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	98.94
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	98.94
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	98.94
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	98.94
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	98.94
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	98.94
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	98.93
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	98.93
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	98.93
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	98.93
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	98.93
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	98.93
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	98.93
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	98.93
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	98.93
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	98.92
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	98.92
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	98.92
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	98.92
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	98.91
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	98.91
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	98.91
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	98.91
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	98.91
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	98.91
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	98.91
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	98.91
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	98.91
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	98.91
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	98.91
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	98.9
KOG4721	904	consensus Serine/threonine protein kinase, contain	98.9
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	98.9
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	98.9
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	98.9
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	98.9
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	98.9
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	98.89
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	98.89
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	98.89
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	98.89
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	98.89
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	98.89
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	98.89
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	98.89
KOG0610	459	consensus Putative serine/threonine protein kinase	98.89
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	98.88
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	98.88
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	98.88
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	98.88
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	98.88
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	98.88
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	98.88
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	98.88
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	98.87
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	98.87
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	98.87
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	98.87
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	98.87
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	98.87
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	98.86
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	98.86
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	98.86
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	98.86
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	98.86
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	98.86
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	98.86
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	98.86
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	98.85
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	98.85
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	98.85
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	98.85
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	98.84
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	98.84
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	98.84
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	98.84
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	98.84
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	98.84
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	98.83
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	98.83
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	98.83
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	98.83
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	98.83
KOG0582	516	consensus Ste20-like serine/threonine protein kina	98.83
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	98.83
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	98.82
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	98.82
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	98.82
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	98.82
PTZ00266	1021	NIMA-related protein kinase; Provisional	98.82
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	98.82
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	98.81
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	98.81
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	98.81
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	98.81
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	98.81
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	98.81
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	98.81
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	98.81
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	98.81
PLN03224	507	probable serine/threonine protein kinase; Provisio	98.81
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	98.81
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	98.8
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	98.8
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	98.8
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	98.79
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	98.79
PTZ00283	496	serine/threonine protein kinase; Provisional	98.79
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	98.79
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	98.78
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	98.78
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	98.78
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	98.78
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	98.78
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	98.77
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	98.77
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	98.77
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	98.77
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	98.77
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	98.77
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	98.76
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	98.76
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	98.76
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	98.76
KOG0607	463	consensus MAP kinase-interacting kinase and relate	98.75
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	98.75
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	98.75
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	98.74
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	98.74
KOG1989	738	consensus ARK protein kinase family [Signal transd	98.74
PLN00009	294	cyclin-dependent kinase A; Provisional	98.73
PHA03212	391	serine/threonine kinase US3; Provisional	98.73
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	98.73
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	98.73
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	98.72
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	98.72
PRK09188	365	serine/threonine protein kinase; Provisional	98.72
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	98.72
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	98.71
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	98.71
KOG0589	426	consensus Serine/threonine protein kinase [General	98.71
KOG0694	694	consensus Serine/threonine protein kinase [Signal	98.71
PHA03211	461	serine/threonine kinase US3; Provisional	98.71
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	98.71
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	98.71
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	98.71
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	98.7
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	98.7
KOG4717	864	consensus Serine/threonine protein kinase [Signal	98.7
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	98.7
PHA03209	357	serine/threonine kinase US3; Provisional	98.69
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	98.69
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	98.68
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	98.67
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	98.67
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	98.67
KOG0201	467	consensus Serine/threonine protein kinase [Signal	98.65
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	98.65
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	98.65
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	98.64
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	98.63
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	98.63
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	98.63
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	98.63
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	98.63
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	98.63
KOG0577	948	consensus Serine/threonine protein kinase [Signal	98.63
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	98.63
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	98.62
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	98.61
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	98.6
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	98.59
smart00473	78	PAN_AP divergent subfamily of APPLE domains. Apple	98.59
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	98.58
PTZ00036	440	glycogen synthase kinase; Provisional	98.58
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	98.58
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	98.58
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	98.57
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	98.57
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	98.55
PTZ00024	335	cyclin-dependent protein kinase; Provisional	98.55
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	98.54
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	98.53
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	98.53
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	98.53
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	98.52
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	98.52
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	98.52
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	98.52
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	98.52
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	98.51
PHA03207	392	serine/threonine kinase US3; Provisional	98.51
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	98.51
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	98.51
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	98.5
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	98.5
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	98.49
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	98.49
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	98.49
PRK10345	210	hypothetical protein; Provisional	98.49
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	98.48
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	98.48
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	98.47
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	98.47
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	98.46
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	98.46
PTZ00284	467	protein kinase; Provisional	98.45
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	98.44
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	98.44
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	98.44
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	98.42
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	98.42
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	98.4
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	98.4
PHA03210	501	serine/threonine kinase US3; Provisional	98.37
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	98.37
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	98.36
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	98.34
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	98.3
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.29
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	98.29
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	98.29
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	98.24
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	98.22
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	98.21
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	98.21
PRK14879	211	serine/threonine protein kinase; Provisional	98.21
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	98.2
KOG0584	632	consensus Serine/threonine protein kinase [General	98.19
KOG0690	516	consensus Serine/threonine protein kinase [Signal	98.14
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.13
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	98.11
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	98.09
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	98.08
KOG0576	829	consensus Mitogen-activated protein kinase kinase	98.07
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.06
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	98.04
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	97.98
KOG1152	772	consensus Signal transduction serine/threonine kin	97.97
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	97.95
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	97.93
KOG0596	677	consensus Dual specificity; serine/threonine and t	97.92
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	97.92
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	97.85
cd01100	73	APPLE_Factor_XI_like Subfamily of PAN/APPLE-like d	97.83
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	97.82
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	97.73
KOG0695	593	consensus Serine/threonine protein kinase [Signal	97.73
KOG0696	683	consensus Serine/threonine protein kinase [Signal	97.72
smart00090	237	RIO RIO-like kinase.	97.65
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	97.64
KOG1167	418	consensus Serine/threonine protein kinase of the C	97.55
PRK12274	218	serine/threonine protein kinase; Provisional	97.33
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	97.32
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	97.28
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	97.25
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	97.24
PHA02882	294	putative serine/threonine kinase; Provisional	97.15
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	97.15
KOG1027	903	consensus Serine/threonine protein kinase and endo	97.09
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	97.08
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	96.94
COG0515	384	SPS1 Serine/threonine protein kinase [General func	96.94
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	96.6
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	96.59
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	96.52
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	96.34
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	96.33
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	96.33
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	96.31
smart00223	79	APPLE APPLE domain. Four-fold repeat in plasma kal	96.25
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	96.19
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	96.15
KOG1290	590	consensus Serine/threonine protein kinase [Signal	95.76
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	95.55
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	95.16
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	95.02
PF14295	51	PAN_4: PAN domain; PDB: 2YIL_E 2YIP_C 2YIO_A.	94.81
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	94.69
PF08693	40	SKG6: Transmembrane alpha-helix domain; InterPro:	93.54
PF00024	79	PAN_1: PAN domain This Prosite entry concerns appl	92.91
COG0661	517	AarF Predicted unusual protein kinase [General fun	92.9
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	92.55
KOG1235	538	consensus Predicted unusual protein kinase [Genera	92.4
KOG4258	1025	consensus Insulin/growth factor receptor (contains	91.33
PF12273	130	RCR: Chitin synthesis regulation, resistance to Co	90.67
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	89.8
PRK10593	297	hypothetical protein; Provisional	89.66
cd01099	80	PAN_AP_HGF Subfamily of PAN/APPLE-like domains; pr	89.52
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	89.3
PF01102	122	Glycophorin_A: Glycophorin A; InterPro: IPR001195	88.98
PLN02876	822	acyl-CoA dehydrogenase	88.84
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	87.25
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	86.42
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	86.04
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	84.91
PF08277	71	PAN_3: PAN-like domain; InterPro: IPR006583 PAN do	82.85
COG0478	304	RIO-like serine/threonine protein kinase fused to	82.42
PHA03265	402	envelope glycoprotein D; Provisional	82.05
KOG1243	690	consensus Protein kinase [General function predict	82.04
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	80.39
PF01034	64	Syndecan: Syndecan domain; InterPro: IPR001050 The	80.29

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=7.7e-25  Score=200.23  Aligned_cols=116  Identities=27%  Similarity=0.395  Sum_probs=105.7

Q ss_pred             CCCccCHHHHHHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH-HHHHHHHhhh
Q 043820          142 ELPLFELATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF-FARSVTEVAK  220 (282)
Q Consensus       142 ~~~~~~~~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~  220 (282)
                      ..+.|+|.+|..||++|+..+.||+|+||.||+             |.++++..||||++.....+..+ |.+|+.++++
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYk-------------G~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~  127 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYK-------------GVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSR  127 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEE-------------EEECCCCEEEEEEecCCCCcchhHHHHHHHHHhc
Confidence            567899999999999999999999999999999             99999999999998765554233 9999999999


Q ss_pred             CCCCccceeccceEeeCCe-EEEEEEecCCCCCccccccCCCCCcCCCCCcccc
Q 043820          221 IYARSRPRSYPSVVIRPGY-KVGLILELKPDPDPNPDRLHSSRVRSLQYPDPAQ  273 (282)
Q Consensus       221 l~H~nlv~l~~g~~~~~~~-~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~~  273 (282)
                      ++|||||+|+ |+|.+.++ .+ ||||||+||+|.++|+..... .|+|.+|++
T Consensus       128 l~H~Nlv~Ll-GyC~e~~~~~~-LVYEym~nGsL~d~L~~~~~~-~L~W~~R~k  178 (361)
T KOG1187|consen  128 LRHPNLVKLL-GYCLEGGEHRL-LVYEYMPNGSLEDHLHGKKGE-PLDWETRLK  178 (361)
T ss_pred             CCCcCcccEE-EEEecCCceEE-EEEEccCCCCHHHHhCCCCCC-CCCHHHHHH
Confidence            9999999999 99999984 88 999999999999999987654 899999995

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.70  E-value=7.8e-18  Score=160.55  Aligned_cols=109  Identities=17%  Similarity=0.163  Sum_probs=89.3

Q ss_pred             ccCHHHHHHhccCc---------cccceecccCccceeccccccccccccceeecC----CCcEEEEEEccCCCCchhH-
Q 043820          145 LFELATIANATDNF---------SINNKLGEGGFGPVYKVVAAGICFAGTITGARI----DARVVAARIVFAGSVTGIF-  210 (282)
Q Consensus       145 ~~~~~el~~at~~f---------~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~----~~~~vAvK~l~~~~~~~~~-  210 (282)
                      .++|++--.|...|         .+.++||.|.||.|++             |.++    ....||||.|+.......+ 
T Consensus       609 P~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~-------------GrLk~pgkre~~VAIKTLK~Gytekqrr  675 (996)
T KOG0196|consen  609 PHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCS-------------GRLKLPGKREITVAIKTLKAGYTEKQRR  675 (996)
T ss_pred             CccccCccHHHHHhhhhcChhheEEEEEEecccccceec-------------ccccCCCCcceeEEEeeeccCccHHHHh
Confidence            46777665555444         3568999999999999             8765    2468999999987655544 


Q ss_pred             -HHHHHHHhhhCCCCccceeccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCc
Q 043820          211 -FARSVTEVAKIYARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPD  270 (282)
Q Consensus       211 -f~~e~~~l~~l~H~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~  270 (282)
                       |+.|+.+|++++||||++|. |+.....+.| +|.|||+||+|+.||+....  .+.|.+
T Consensus       676 dFL~EAsIMGQFdHPNIIrLE-GVVTks~PvM-IiTEyMENGsLDsFLR~~DG--qftviQ  732 (996)
T KOG0196|consen  676 DFLSEASIMGQFDHPNIIRLE-GVVTKSKPVM-IITEYMENGSLDSFLRQNDG--QFTVIQ  732 (996)
T ss_pred             hhhhhhhhcccCCCCcEEEEE-EEEecCceeE-EEhhhhhCCcHHHHHhhcCC--ceEeeh
Confidence             99999999999999999999 9999999999 99999999999999987653  355543

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.67  E-value=8.7e-17  Score=155.06  Aligned_cols=100  Identities=20%  Similarity=0.218  Sum_probs=82.3

Q ss_pred             HhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCccceec
Q 043820          153 NATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       153 ~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ..+.+....++||+|+||.||++..-++       ....+.+.||||.++..... ... |.+|+++|..|+|+|||+|+
T Consensus       483 i~r~~i~~~~eLGegaFGkVf~a~~~~l-------~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLl  555 (774)
T KOG1026|consen  483 IPRSDIVFKEELGEGAFGKVFLAEAYGL-------LPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLL  555 (774)
T ss_pred             echhheeehhhhcCchhhhhhhhhccCC-------CCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEE
Confidence            3445555668999999999999554433       22335688999999876665 334 99999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCCC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                       |+|.++++.+ +|+|||..|||.+||....
T Consensus       556 -GVC~~~~P~~-MvFEYm~~GDL~eFLra~s  584 (774)
T KOG1026|consen  556 -GVCREGDPLC-MVFEYMDHGDLHEFLRARS  584 (774)
T ss_pred             -EEEccCCeeE-EEEEecccccHHHHHHhhC
Confidence             9999999999 9999999999999998543

>PF08276 PAN_2: PAN-like domain; InterPro: IPR013227 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions []

Probab=99.57  E-value=2.1e-15  Score=104.23  Aligned_cols=54  Identities=44%  Similarity=1.046  Sum_probs=48.8

Q ss_pred             CCCCCCCCceeecCCCHHHHHHHhhcCCCceeEeeccccCCCceeEEeccccccc
Q 043820            1 MKLPDATPSRVSKSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGELIDM   55 (282)
Q Consensus         1 ~~lpd~~~~~~~~~~~~~~C~~~Cl~nCsC~a~~~~~~~~~~~~C~~~~~~l~~~   55 (282)
                      |++||++...++.+.++++|+..||+||||+||+|.+.+ ++++|++|.++|+|+
T Consensus        13 ~~~p~~~~~~~~~~~s~~~C~~~Cl~nCsC~Ayay~~~~-~~~~C~lW~~~L~d~   66 (66)
T PF08276_consen   13 MKLPDFDNAIVDSSVSLEECEKACLSNCSCTAYAYSNLS-GGGGCLLWYGDLVDL   66 (66)
T ss_pred             eeCCCCcceeeecCCCHHHHHhhcCCCCCEeeEEeeccC-CCCEEEEEcCEeecC
Confidence            689999888887889999999999999999999998655 679999999999874

These domains contain a hair-pin loop like structure, similar to knottins, but the pattern of disulphide bonds differs

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.56  E-value=2.3e-15  Score=140.07  Aligned_cols=90  Identities=18%  Similarity=0.201  Sum_probs=78.9

Q ss_pred             cCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchh-H-HHHHHHHhhhCCCCccceeccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGI-F-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~-~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      ..+...++||+|.||.|..             +....+..||||+++....... + |.+|+++|.+++|||||+|+ |+
T Consensus       538 s~L~~~ekiGeGqFGEVhL-------------Ceveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLv-GV  603 (807)
T KOG1094|consen  538 SRLRFKEKIGEGQFGEVHL-------------CEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELL-GV  603 (807)
T ss_pred             hheehhhhhcCcccceeEE-------------EEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEE-ee
Confidence            3345668999999999999             7776679999999987655444 4 99999999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccCC
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      |..+++.. +|+|||++|+|.+||...
T Consensus       604 C~~DePic-mI~EYmEnGDLnqFl~ah  629 (807)
T KOG1094|consen  604 CVQDDPLC-MITEYMENGDLNQFLSAH  629 (807)
T ss_pred             eecCCchH-HHHHHHhcCcHHHHHHhc
Confidence            99999988 999999999999999754

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.56  E-value=4.4e-15  Score=133.12  Aligned_cols=92  Identities=14%  Similarity=0.221  Sum_probs=79.3

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC--CchhH-HHHHHHHhhhCCCCccceec
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS--VTGIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~--~~~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ..+|...+.||+|+|+.||+             |... ++.+||||.+....  ....+ ...|+.+|+.++|+|||+|+
T Consensus         9 ~~~y~~~~~iG~GsfavVyk-------------g~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~   75 (429)
T KOG0595|consen    9 VGDYELSREIGSGSFAVVYK-------------GRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLL   75 (429)
T ss_pred             cccceehhhccCcceEEEEE-------------eEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEE
Confidence            34677778899999999999             8765 58999999997653  33344 89999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCCC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                       .++..++..+ ||||||.+|||.+||+...
T Consensus        76 -d~~~~~~~i~-lVMEyC~gGDLs~yi~~~~  104 (429)
T KOG0595|consen   76 -DCIEDDDFIY-LVMEYCNGGDLSDYIRRRG  104 (429)
T ss_pred             -EEEecCCeEE-EEEEeCCCCCHHHHHHHcC
Confidence             9999999888 9999999999999998653

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.55  E-value=2e-15  Score=140.71  Aligned_cols=119  Identities=21%  Similarity=0.268  Sum_probs=93.0

Q ss_pred             cCHHHHHHhccCccccceecccCccceeccccccccccccceeecCC--C--cE-EEEEEccCCC-C--chhH-HHHHHH
Q 043820          146 FELATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARID--A--RV-VAARIVFAGS-V--TGIF-FARSVT  216 (282)
Q Consensus       146 ~~~~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~--~--~~-vAvK~l~~~~-~--~~~~-f~~e~~  216 (282)
                      +.-+.|+...++....++||+|+||.||+             |.+..  +  .. ||+|+..... .  ...+ |++|++
T Consensus       147 I~r~~Wel~H~~v~l~kkLGeGaFGeV~~-------------G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EAr  213 (474)
T KOG0194|consen  147 IPRQKWELSHSDIELGKKLGEGAFGEVFK-------------GKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEAR  213 (474)
T ss_pred             ccccccEEeccCccccceeecccccEEEE-------------EEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHH
Confidence            33445566666767779999999999999             87653  2  23 8999987522 2  2233 999999


Q ss_pred             HhhhCCCCccceeccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcccc-------ceeccCCC
Q 043820          217 EVAKIYARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPAQ-------GFAIPSVN  281 (282)
Q Consensus       217 ~l~~l~H~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~~-------~~~~~~~~  281 (282)
                      +|++++|+|||+++ |++....+.+ ||||+|.||+|.+||.....  .+++.+|++       |+++.|++
T Consensus       214 vMr~l~H~NVVr~y-GVa~~~~Pl~-ivmEl~~gGsL~~~L~k~~~--~v~~~ek~~~~~~AA~Gl~YLh~k  281 (474)
T KOG0194|consen  214 VMRQLNHPNVVRFY-GVAVLEEPLM-LVMELCNGGSLDDYLKKNKK--SLPTLEKLRFCYDAARGLEYLHSK  281 (474)
T ss_pred             HHHhCCCCCEEEEE-EEEcCCCccE-EEEEecCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHhHHHHHHHC
Confidence            99999999999999 9999999999 99999999999999976552  577777764       66665543

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.53  E-value=8.8e-15  Score=133.65  Aligned_cols=97  Identities=23%  Similarity=0.305  Sum_probs=80.5

Q ss_pred             cceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCch--hH-HHHHHHHhhhCCCCccceeccceEeeC
Q 043820          161 NNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTG--IF-FARSVTEVAKIYARSRPRSYPSVVIRP  237 (282)
Q Consensus       161 ~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l~H~nlv~l~~g~~~~~  237 (282)
                      ...+|+|+||+||+             |.+.....||+|.+.......  .+ |.+|+.+|.+++|||||+++ |.|.++
T Consensus        46 ~~~iG~G~~g~V~~-------------~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~-G~~~~~  111 (362)
T KOG0192|consen   46 EEVLGSGSFGTVYK-------------GKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFY-GACTSP  111 (362)
T ss_pred             hhhcccCCceeEEE-------------EEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEE-EEEcCC
Confidence            36699999999999             887543449999997643322  34 99999999999999999999 999988


Q ss_pred             C-eEEEEEEecCCCCCccccccCCCCCcCCCCCcccc
Q 043820          238 G-YKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPAQ  273 (282)
Q Consensus       238 ~-~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~~  273 (282)
                      . ... +|||||++|+|.++|+.. +...|+|..|++
T Consensus       112 ~~~~~-iVtEy~~~GsL~~~l~~~-~~~~l~~~~~l~  146 (362)
T KOG0192|consen  112 PGSLC-IVTEYMPGGSLSVLLHKK-RKRKLPLKVRLR  146 (362)
T ss_pred             CCceE-EEEEeCCCCcHHHHHhhc-ccCCCCHHHHHH
Confidence            8 566 999999999999999885 234789988874

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.51  E-value=7.6e-15  Score=135.36  Aligned_cols=95  Identities=19%  Similarity=0.241  Sum_probs=80.7

Q ss_pred             HHHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhHHHHHHHHhhhCCCCccceec
Q 043820          151 IANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       151 l~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ++.....+...+.||+|.||.||.             |.+.....||+|.+.........|.+|+.+|.+|+|+|||+|+
T Consensus       201 wei~r~~l~l~~~LG~G~FG~V~~-------------g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~  267 (468)
T KOG0197|consen  201 WEIPREELKLIRELGSGQFGEVWL-------------GKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLY  267 (468)
T ss_pred             eeecHHHHHHHHHhcCCccceEEE-------------EEEcCCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEE
Confidence            333334445558999999999999             9987777999999987644444499999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                       |+|..+++.+ ||||||++|+|.+||...
T Consensus       268 -gV~~~~~piy-IVtE~m~~GsLl~yLr~~  295 (468)
T KOG0197|consen  268 -GVCTKQEPIY-IVTEYMPKGSLLDYLRTR  295 (468)
T ss_pred             -EEEecCCceE-EEEEecccCcHHHHhhhc
Confidence             9999988888 999999999999999873

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.47  E-value=1.8e-13  Score=140.35  Aligned_cols=101  Identities=12%  Similarity=0.126  Sum_probs=80.9

Q ss_pred             cCHHHHHHhccCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCchhHHHHHHHHhhhCCCC
Q 043820          146 FELATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVTGIFFARSVTEVAKIYAR  224 (282)
Q Consensus       146 ~~~~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~  224 (282)
                      ++++++.   ..+...+.||+|+||.||+             |.. .++..||+|.+......   ...|+..|.+++||
T Consensus       683 ~~~~~~~---~~~~~~~~ig~G~~g~Vy~-------------~~~~~~~~~vavK~~~~~~~~---~~~~~~~l~~l~Hp  743 (968)
T PLN00113        683 ITINDIL---SSLKEENVISRGKKGASYK-------------GKSIKNGMQFVVKEINDVNSI---PSSEIADMGKLQHP  743 (968)
T ss_pred             hhHHHHH---hhCCcccEEccCCCeeEEE-------------EEECCCCcEEEEEEccCCccc---cHHHHHHHhhCCCC
Confidence            4444444   3466778999999999999             875 46899999998643221   34568889999999


Q ss_pred             ccceeccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcccc
Q 043820          225 SRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPAQ  273 (282)
Q Consensus       225 nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~~  273 (282)
                      |||+++ |+|.+.+..+ +|||||++|+|.++++      .++|.+|.+
T Consensus       744 nIv~~~-~~~~~~~~~~-lv~Ey~~~g~L~~~l~------~l~~~~~~~  784 (968)
T PLN00113        744 NIVKLI-GLCRSEKGAY-LIHEYIEGKNLSEVLR------NLSWERRRK  784 (968)
T ss_pred             CcceEE-EEEEcCCCCE-EEEeCCCCCcHHHHHh------cCCHHHHHH
Confidence            999999 9999888888 9999999999999995      278887754

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.47  E-value=2.2e-14  Score=143.01  Aligned_cols=112  Identities=21%  Similarity=0.198  Sum_probs=86.5

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecCC------CcEEEEEEccCCCCchhH--HHHHHHHhhhCCCCcc
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARID------ARVVAARIVFAGSVTGIF--FARSVTEVAKIYARSR  226 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~------~~~vAvK~l~~~~~~~~~--f~~e~~~l~~l~H~nl  226 (282)
                      ..+.+..+.||+|.||.||+             |.+.+      ...||+|.+.......+.  |++|+.+|++++||||
T Consensus       691 ~~~v~l~~~lG~G~FG~VY~-------------g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNi  757 (1025)
T KOG1095|consen  691 RKNVTLLRVLGKGAFGEVYE-------------GTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNI  757 (1025)
T ss_pred             hhheEeeeeeccccccceEE-------------EEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcce
Confidence            34455668999999999999             65432      345999999877665555  9999999999999999


Q ss_pred             ceeccceEeeCCeEEEEEEecCCCCCccccccCCCCC---cCCCCCccccceeccCCC
Q 043820          227 PRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRV---RSLQYPDPAQGFAIPSVN  281 (282)
Q Consensus       227 v~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~---~~l~W~~R~~~~~~~~~~  281 (282)
                      |+++ |+|.+....+ +++|||++|||..||++.+..   ...-=++.|=+||+++++
T Consensus       758 v~li-Gv~l~~~~~~-i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~  813 (1025)
T KOG1095|consen  758 VSLI-GVCLDSGPPL-ILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAK  813 (1025)
T ss_pred             eeEE-EeecCCCCcE-EEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhh
Confidence            9999 9999988888 999999999999999976431   111112334466666553

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.40  E-value=9.6e-14  Score=130.24  Aligned_cols=99  Identities=15%  Similarity=0.140  Sum_probs=85.6

Q ss_pred             HHHHHHhccCccccceecccCccceeccccccccccccceeecCC-CcEEEEEEccCCCCchhHHHHHHHHhhhCCCCcc
Q 043820          148 LATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARID-ARVVAARIVFAGSVTGIFFARSVTEVAKIYARSR  226 (282)
Q Consensus       148 ~~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~-~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~nl  226 (282)
                      +++|+-...++...++||-|.+|.||.             |.+.. ...||||.++.....-++|+.|+.+|..++||||
T Consensus       259 ~DkWEmeRtdItMkhKLGGGQYGeVYe-------------GvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNL  325 (1157)
T KOG4278|consen  259 ADKWEMERTDITMKHKLGGGQYGEVYE-------------GVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNL  325 (1157)
T ss_pred             cchhhccchheeeeeccCCCcccceee-------------eeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccH
Confidence            356665666677779999999999999             88765 6899999998765554459999999999999999


Q ss_pred             ceeccceEeeCCeEEEEEEecCCCCCccccccCCC
Q 043820          227 PRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       227 v~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      |+|+ |+|....+.| ||.|||.+|+|.+||+.-+
T Consensus       326 VqLL-GVCT~EpPFY-IiTEfM~yGNLLdYLRecn  358 (1157)
T KOG4278|consen  326 VQLL-GVCTHEPPFY-IITEFMCYGNLLDYLRECN  358 (1157)
T ss_pred             HHHh-hhhccCCCeE-EEEecccCccHHHHHHHhc
Confidence            9999 9999998888 9999999999999998644

>cd00129 PAN_APPLE PAN/APPLE-like domain; present in N-terminal (N) domains of plasminogen/ hepatocyte growth factor proteins, plasma prekallikrein/coagulation factor XI and microneme antigen proteins, plant receptor-like protein kinases, and various nematode and leech anti-platelet proteins

Probab=99.40  E-value=3.6e-13  Score=96.24  Aligned_cols=59  Identities=20%  Similarity=0.343  Sum_probs=51.7

Q ss_pred             CCCCCCCCceeecCCCHHHHHHHhhc---CCCceeEeeccccCCCceeEEecccc-ccceecCCCCceEEEE
Q 043820            1 MKLPDATPSRVSKSINLNECREKCLE---NSSCMVYTNLDIRGGGSGCAMWFGEL-IDMRDFPDGGQDLYIR   68 (282)
Q Consensus         1 ~~lpd~~~~~~~~~~~~~~C~~~Cl~---nCsC~a~~~~~~~~~~~~C~~~~~~l-~~~~~~~~~~~~~~~~   68 (282)
                      ||+||+..      .+++||++.|++   ||||+||+|.+.   +.+|.+|.+++ .|.+.+.+.+.++|+|
T Consensus        17 ~klpd~~~------~s~~eC~~~Cl~~~~nCsC~Aya~~~~---~~gC~~W~~~l~~d~~~~~~~g~~Ly~r   79 (80)
T cd00129          17 LKIKTTKA------NTADECANRCEKNGLPFSCKAFVFAKA---RKQCLWFPFNSMSGVRKEFSHGFDLYEN   79 (80)
T ss_pred             ccCCcccc------cCHHHHHHHHhcCCCCCCceeeeccCC---CCCeEEecCcchhhHHhccCCCceeEeE
Confidence            57787766      689999999999   999999999752   46899999999 9999888789999998

Common structural features include two disulfide bonds that link the alpha-helix to the central region of the protein. PAN domains have significant functional versatility, fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.

>cd01098 PAN_AP_plant Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins

Probab=99.36  E-value=1.5e-12  Score=94.14  Aligned_cols=64  Identities=44%  Similarity=0.956  Sum_probs=51.6

Q ss_pred             CCCCCCCceeecCCCHHHHHHHhhcCCCceeEeeccccCCCceeEEeccccccceecCCCCceEEEEee
Q 043820            2 KLPDATPSRVSKSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGELIDMRDFPDGGQDLYIRMS   70 (282)
Q Consensus         2 ~lpd~~~~~~~~~~~~~~C~~~Cl~nCsC~a~~~~~~~~~~~~C~~~~~~l~~~~~~~~~~~~~~~~~~   70 (282)
                      ++|+..+..  ..+++++|++.||+||+|+||+|.+   ++++|++|..++.+.+.....+.++|||++
T Consensus        21 ~~~~~~~~~--~~~s~~~C~~~Cl~nCsC~a~~~~~---~~~~C~~~~~~~~~~~~~~~~~~~~yiKv~   84 (84)
T cd01098          21 KLPDNASAI--TAISLEECREACLSNCSCTAYAYNN---GSGGCLLWNGLLNNLRSLSSGGGTLYLRLA   84 (84)
T ss_pred             eCCCchhhh--ccCCHHHHHHHHhcCCCcceeeecC---CCCeEEEEeceecceEeecCCCcEEEEEeC
Confidence            445444332  6789999999999999999999985   468999999999998775555689999985

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization.

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.35  E-value=2.3e-12  Score=117.63  Aligned_cols=91  Identities=16%  Similarity=0.157  Sum_probs=71.3

Q ss_pred             CccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH-HHHHHHHhh--hCCCCccceeccce
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF-FARSVTEVA--KIYARSRPRSYPSV  233 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~--~l~H~nlv~l~~g~  233 (282)
                      ...+...+|+|+||.|||             |.+. ++.||||+++..   ... |.+|-.+..  .++|+||++++ |.
T Consensus       211 pl~l~eli~~Grfg~V~K-------------aqL~-~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi-~~  272 (534)
T KOG3653|consen  211 PLQLLELIGRGRFGCVWK-------------AQLD-NRLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFI-GA  272 (534)
T ss_pred             chhhHHHhhcCccceeeh-------------hhcc-CceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhh-ch
Confidence            445558899999999999             8884 489999999643   233 888877754  56999999999 76


Q ss_pred             EeeCC----eEEEEEEecCCCCCccccccCCCCCcCCCCCc
Q 043820          234 VIRPG----YKVGLILELKPDPDPNPDRLHSSRVRSLQYPD  270 (282)
Q Consensus       234 ~~~~~----~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~  270 (282)
                      -..+.    +.+ ||+||.++|||.+||...    .++|..
T Consensus       273 ekr~t~~~~eyw-LVt~fh~kGsL~dyL~~n----tisw~~  308 (534)
T KOG3653|consen  273 EKRGTADRMEYW-LVTEFHPKGSLCDYLKAN----TISWNS  308 (534)
T ss_pred             hccCCcccccee-EEeeeccCCcHHHHHHhc----cccHHH
Confidence            54444    555 999999999999999754    378864

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.33  E-value=1.9e-12  Score=116.47  Aligned_cols=89  Identities=19%  Similarity=0.226  Sum_probs=74.6

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch-----hH---HHHHHHHhhhCCCCccce
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG-----IF---FARSVTEVAKIYARSRPR  228 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~-----~~---f~~e~~~l~~l~H~nlv~  228 (282)
                      |-..+.||+|+||.|-+             +.-. .|+.||||++++....+     .+   ..+|+++|.+++|||||+
T Consensus       174 yii~~~LGsGafg~Vkl-------------a~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~  240 (475)
T KOG0615|consen  174 YIISKTLGSGAFGLVKL-------------AYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVR  240 (475)
T ss_pred             eEeeeeecCCceeEEEE-------------EEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEE
Confidence            45668999999999999             6644 68999999997642211     12   579999999999999999


Q ss_pred             eccceEeeCCeEEEEEEecCCCCCccccccCCC
Q 043820          229 SYPSVVIRPGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       229 l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      ++ ++...++..| +|||||++|+|.+++...+
T Consensus       241 ~~-d~f~~~ds~Y-mVlE~v~GGeLfd~vv~nk  271 (475)
T KOG0615|consen  241 IK-DFFEVPDSSY-MVLEYVEGGELFDKVVANK  271 (475)
T ss_pred             Ee-eeeecCCceE-EEEEEecCccHHHHHHhcc
Confidence            99 9999999988 9999999999999987644

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.31  E-value=1.7e-13  Score=131.91  Aligned_cols=95  Identities=19%  Similarity=0.180  Sum_probs=75.9

Q ss_pred             cccceecccCccceeccccccccccccceee-cCCC----cEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCccceecc
Q 043820          159 SINNKLGEGGFGPVYKVVAAGICFAGTITGA-RIDA----RVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       159 ~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~-~~~~----~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      ....+||+|+||+||+             |. .++|    .+||+|.+....... .. |++|+..|.+++|+||+||+ 
T Consensus       699 kk~kvLGsgAfGtV~k-------------Giw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLL-  764 (1177)
T KOG1025|consen  699 KKDKVLGSGAFGTVYK-------------GIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLL-  764 (1177)
T ss_pred             hhhceeccccceeEEe-------------eeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHh-
Confidence            3448999999999999             54 3443    578999987654443 33 99999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccCCCC----CcCCCCC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLHSSR----VRSLQYP  269 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~----~~~l~W~  269 (282)
                      |+|.... .. ||++|||.|.|.+|++..+.    ...|+|-
T Consensus       765 gvc~~s~-~q-lvtq~mP~G~LlDyvr~hr~~igsq~lLnw~  804 (1177)
T KOG1025|consen  765 GVCMLST-LQ-LVTQLMPLGCLLDYVREHRDNIGSQDLLNWC  804 (1177)
T ss_pred             hhcccch-HH-HHHHhcccchHHHHHHHhhccccHHHHHHHH
Confidence            9998766 56 99999999999999986543    2346774

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.30  E-value=3e-12  Score=119.18  Aligned_cols=101  Identities=15%  Similarity=0.106  Sum_probs=77.7

Q ss_pred             HHHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCch-hH-HHHHHHHhhhCC-CCccc
Q 043820          151 IANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTG-IF-FARSVTEVAKIY-ARSRP  227 (282)
Q Consensus       151 l~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~-H~nlv  227 (282)
                      +....+.|...+.||+|+||.||++...+.       +....+..||+|++....... .+ |.+|+.++.++. |||||
T Consensus        32 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~-------~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv  104 (400)
T cd05105          32 WEFPRDGLVLGRILGSGAFGKVVEGTAYGL-------SRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIV  104 (400)
T ss_pred             eeccccceehhheecCCCCceEEEEEEccc-------CCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCee
Confidence            344566788889999999999999221111       111124579999997543333 33 999999999995 99999


Q ss_pred             eeccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          228 RSYPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       228 ~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +++ |++...+..+ |||||+++|+|.++|+..
T Consensus       105 ~l~-~~~~~~~~~~-lv~Ey~~~g~L~~~l~~~  135 (400)
T cd05105         105 NLL-GACTKSGPIY-IITEYCFYGDLVNYLHKN  135 (400)
T ss_pred             eEE-EEEccCCceE-EEEEecCCCcHHHHHHHh
Confidence            999 9998888888 999999999999998753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.28  E-value=2.2e-12  Score=116.77  Aligned_cols=99  Identities=17%  Similarity=0.211  Sum_probs=74.9

Q ss_pred             HhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCch-hH-HHHHHHHhhhC-CCCcccee
Q 043820          153 NATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTG-IF-FARSVTEVAKI-YARSRPRS  229 (282)
Q Consensus       153 ~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l-~H~nlv~l  229 (282)
                      .+.++|...+.||+|+||.||++...+.       .....+..||+|.+....... .. +.+|+.++..+ +|+||+++
T Consensus         4 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~-------~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~   76 (338)
T cd05102           4 FPRDRLRLGKVLGHGAFGKVVEASAFGI-------DKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNL   76 (338)
T ss_pred             cchhHceeeeEeccCCcceEEEEEEecc-------CCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeE
Confidence            3456788889999999999999321111       011235689999997543333 23 99999999999 89999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      + |.+...+..++++|||+++|+|.++|..
T Consensus        77 ~-~~~~~~~~~~~lv~ey~~~g~L~~~l~~  105 (338)
T cd05102          77 L-GACTKPNGPLMVIVEFCKYGNLSNFLRA  105 (338)
T ss_pred             E-eEecCCCCceEEEEecCCCCcHHHHHHh
Confidence            9 9887755444499999999999999874

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.28  E-value=4.9e-12  Score=110.60  Aligned_cols=100  Identities=17%  Similarity=0.160  Sum_probs=80.8

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC----CCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCcccee
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI----DARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~----~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      ++|...+.||+|+||.||+             |...    .+..||+|.++...... .. |.+|+..+.+++|+||+++
T Consensus         5 ~~~~~~~~ig~G~fg~V~~-------------~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~   71 (266)
T cd05064           5 KSIKIERILGTGRFGELCR-------------GCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRL   71 (266)
T ss_pred             HHeEEeeeecccCCCeEEE-------------EEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeE
Confidence            4577779999999999999             6542    35789999997643333 33 9999999999999999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      . |++..++..+ +||||+++|+|.+++....  ..++|...+
T Consensus        72 ~-~~~~~~~~~~-lv~e~~~~~~L~~~l~~~~--~~l~~~~~~  110 (266)
T cd05064          72 E-GVITRGNTMM-IVTEYMSNGALDSFLRKHE--GQLVAGQLM  110 (266)
T ss_pred             E-EEEecCCCcE-EEEEeCCCCcHHHHHHhCC--CCCCHHHHH
Confidence            9 9998888888 9999999999999987543  246666554

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.28  E-value=3.1e-12  Score=117.99  Aligned_cols=99  Identities=16%  Similarity=0.092  Sum_probs=77.0

Q ss_pred             HhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCc-hhH-HHHHHHHhhhC-CCCcccee
Q 043820          153 NATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVT-GIF-FARSVTEVAKI-YARSRPRS  229 (282)
Q Consensus       153 ~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l-~H~nlv~l  229 (282)
                      ...++|...+.||+|+||.||++...+.       .....+..||+|.+...... ..+ +.+|+.++..+ +|||||++
T Consensus        32 ~~~~~~~~~~~LG~G~fG~V~~~~~~~~-------~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l  104 (375)
T cd05104          32 FPRNRLSFGKTLGAGAFGKVVEATAYGL-------FKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNL  104 (375)
T ss_pred             cchHHeehhheecCCccceEEEEEEecc-------ccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeee
Confidence            3445677889999999999999321100       01123568999999754333 334 99999999999 89999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      + |.+..++..+ +||||+++|+|.++|...
T Consensus       105 ~-~~~~~~~~~~-lv~E~~~~g~L~~~l~~~  133 (375)
T cd05104         105 L-GACTVGGPTL-VITEYCCYGDLLNFLRRK  133 (375)
T ss_pred             e-eeeccCCcce-eeehhccCCcHHHHHHhc
Confidence            9 9999999888 999999999999999753

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.24  E-value=7e-12  Score=116.74  Aligned_cols=101  Identities=16%  Similarity=0.155  Sum_probs=78.1

Q ss_pred             HHHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCch-hH-HHHHHHHhhhCC-CCccc
Q 043820          151 IANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTG-IF-FARSVTEVAKIY-ARSRP  227 (282)
Q Consensus       151 l~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~-H~nlv  227 (282)
                      +..+.+++...+.||+|+||.||++...+.       +....+..||+|.+....... .. +.+|+.+|..+. |+|||
T Consensus        32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~-------~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv  104 (401)
T cd05107          32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGL-------SHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIV  104 (401)
T ss_pred             ceecHHHeehhhhccCCCceeEEEEEEcCC-------CCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeE
Confidence            334445677779999999999999322211       111235689999997543333 23 999999999997 99999


Q ss_pred             eeccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          228 RSYPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       228 ~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +++ |.+...+..+ +|+||+++|+|.++|+..
T Consensus       105 ~~~-~~~~~~~~~~-iv~E~~~~g~L~~~l~~~  135 (401)
T cd05107         105 NLL-GACTKGGPIY-IITEYCRYGDLVDYLHRN  135 (401)
T ss_pred             EEE-EEEccCCCcE-EEEeccCCCcHHHHHHhc
Confidence            999 9999888888 999999999999999754

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.23  E-value=5.1e-12  Score=110.27  Aligned_cols=98  Identities=19%  Similarity=0.255  Sum_probs=76.6

Q ss_pred             ccceecccCccceeccccccccccccceeecC-----CCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCccceeccc
Q 043820          160 INNKLGEGGFGPVYKVVAAGICFAGTITGARI-----DARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       160 ~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-----~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      ..+.||.|.||.||+             |.+.     .+..|+||.+....... .+ |.+|+..+.+++|+||++++ |
T Consensus         3 ~~~~ig~G~fg~v~~-------------~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~-g   68 (259)
T PF07714_consen    3 LIKQIGEGSFGKVYR-------------AEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLY-G   68 (259)
T ss_dssp             EEEEEEEESSEEEEE-------------EEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EE-E
T ss_pred             EeeEEccCCCcEEEE-------------EEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccc-c
Confidence            347899999999999             6654     25789999996543332 34 99999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcccc
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPAQ  273 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~~  273 (282)
                      +|...+..+ +|+||+++|+|.++|.... ...++|..+++
T Consensus        69 ~~~~~~~~~-lv~e~~~~g~L~~~L~~~~-~~~~~~~~~~~  107 (259)
T PF07714_consen   69 FCIENEPLF-LVMEYCPGGSLDDYLKSKN-KEPLSEQQRLS  107 (259)
T ss_dssp             EEESSSSEE-EEEE--TTEBHHHHHHHTC-TTTSBHHHHHH
T ss_pred             ccccccccc-ccccccccccccccccccc-ccccccccccc
Confidence            999777777 9999999999999998762 23577776653

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>PHA02988 hypothetical protein; Provisional

Probab=99.22  E-value=2.8e-11  Score=107.21  Aligned_cols=108  Identities=16%  Similarity=0.107  Sum_probs=83.1

Q ss_pred             CCCCccCHHHHHHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCch---hH-HHHHHH
Q 043820          141 LELPLFELATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTG---IF-FARSVT  216 (282)
Q Consensus       141 ~~~~~~~~~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~---~~-f~~e~~  216 (282)
                      ...+.++++++..     .....+|+|++|.||+             |.. +|..||+|.+.......   .+ |.+|+.
T Consensus        10 ~~~~~i~~~~i~~-----~~~~~i~~g~~~~v~~-------------~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~   70 (283)
T PHA02988         10 NDIKCIESDDIDK-----YTSVLIKENDQNSIYK-------------GIF-NNKEVIIRTFKKFHKGHKVLIDITENEIK   70 (283)
T ss_pred             CcceecCHHHcCC-----CCCeEEeeCCceEEEE-------------EEE-CCEEEEEEeccccccccHHHHHHHHHHHH
Confidence            3445566666632     2236899999999999             877 67899999997543332   24 889999


Q ss_pred             HhhhCCCCccceeccceEee----CCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          217 EVAKIYARSRPRSYPSVVIR----PGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       217 ~l~~l~H~nlv~l~~g~~~~----~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      +|.+++|||||+++ |++.+    ....+ +||||+++|+|.++|....   .++|..++
T Consensus        71 ~l~~l~h~nIv~~~-g~~~~~~~~~~~~~-lv~Ey~~~g~L~~~l~~~~---~~~~~~~~  125 (283)
T PHA02988         71 NLRRIDSNNILKIY-GFIIDIVDDLPRLS-LILEYCTRGYLREVLDKEK---DLSFKTKL  125 (283)
T ss_pred             HHHhcCCCCEEEEe-eeEEecccCCCceE-EEEEeCCCCcHHHHHhhCC---CCChhHHH
Confidence            99999999999999 99876    33456 9999999999999997543   46776654

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.21  E-value=9.1e-12  Score=114.84  Aligned_cols=99  Identities=19%  Similarity=0.186  Sum_probs=78.4

Q ss_pred             HHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchh-H-HHHHHHHhhhC-CCCccce
Q 043820          152 ANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGI-F-FARSVTEVAKI-YARSRPR  228 (282)
Q Consensus       152 ~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~-~-f~~e~~~l~~l-~H~nlv~  228 (282)
                      ....++|...+.||+|+||.||++...+.       |...++..||+|.+........ . +.+|+.++..+ +|+|||+
T Consensus        34 ~~~~~~~~~~~~LG~G~fg~V~~~~~~~~-------~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~  106 (374)
T cd05106          34 EFPRDNLQFGKTLGAGAFGKVVEATAFGL-------GKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVN  106 (374)
T ss_pred             cccHHHceehheecCCCcccEEEEEEecC-------CcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceee
Confidence            34445678889999999999999433222       2233456899999975433332 3 89999999999 8999999


Q ss_pred             eccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          229 SYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       229 l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ++ |.+..++..+ +||||+++|+|.++|+.
T Consensus       107 ~~-~~~~~~~~~~-lv~ey~~~g~L~~~l~~  135 (374)
T cd05106         107 LL-GACTHGGPVL-VITEYCCYGDLLNFLRK  135 (374)
T ss_pred             Ee-eEecCCCCeE-EeHhhccCCcHHHHHHh
Confidence            99 9999888888 99999999999999864

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.21  E-value=2.2e-11  Score=105.56  Aligned_cols=99  Identities=16%  Similarity=0.124  Sum_probs=80.3

Q ss_pred             CccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhHHHHHHHHhhhCCCCccceeccceEee
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRPRSYPSVVIR  236 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~nlv~l~~g~~~~  236 (282)
                      +|...+.||+|+||.||+             +...++..+|+|.+.........|.+|+.++.+++|+||++++ +++..
T Consensus         5 ~~~~~~~lg~G~~~~vy~-------------~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~-~~~~~   70 (256)
T cd05114           5 ELTFMKELGSGQFGVVHL-------------GKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLY-GVCTQ   70 (256)
T ss_pred             HcEEeeEecCCcCceEEE-------------EEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEE-EEEcc
Confidence            466678999999999999             8777777899998864433222389999999999999999999 99988


Q ss_pred             CCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          237 PGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       237 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      .+..+ ++|||+++|+|.+++....  ..++|..+.
T Consensus        71 ~~~~~-iv~e~~~~~~L~~~~~~~~--~~~~~~~~~  103 (256)
T cd05114          71 QKPLY-IVTEFMENGCLLNYLRQRQ--GKLSKDMLL  103 (256)
T ss_pred             CCCEE-EEEEcCCCCcHHHHHHhCc--cCCCHHHHH
Confidence            88888 9999999999999987543  235665443

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.20  E-value=1.3e-11  Score=112.04  Aligned_cols=86  Identities=13%  Similarity=0.143  Sum_probs=67.2

Q ss_pred             CccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH-HHHHHHHhhh--CCCCccceeccce
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF-FARSVTEVAK--IYARSRPRSYPSV  233 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~--l~H~nlv~l~~g~  233 (282)
                      ...+.+.||+|.||.||+             |.+ .|..||||++..   .++. |.+|.++.+.  |+|+||..++ +.
T Consensus       212 qI~L~e~IGkGRyGEVwr-------------G~w-rGe~VAVKiF~s---rdE~SWfrEtEIYqTvmLRHENILgFI-aa  273 (513)
T KOG2052|consen  212 QIVLQEIIGKGRFGEVWR-------------GRW-RGEDVAVKIFSS---RDERSWFRETEIYQTVMLRHENILGFI-AA  273 (513)
T ss_pred             eeEEEEEecCccccceee-------------ccc-cCCceEEEEecc---cchhhhhhHHHHHHHHHhccchhhhhh-hc
Confidence            456678999999999999             877 578999999953   3444 8888887664  5999999999 55


Q ss_pred             EeeCC---eEEEEEEecCCCCCccccccCC
Q 043820          234 VIRPG---YKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       234 ~~~~~---~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      -..+.   ..++||.+|.++|||.+||...
T Consensus       274 D~~~~gs~TQLwLvTdYHe~GSL~DyL~r~  303 (513)
T KOG2052|consen  274 DNKDNGSWTQLWLVTDYHEHGSLYDYLNRN  303 (513)
T ss_pred             cccCCCceEEEEEeeecccCCcHHHHHhhc
Confidence            33322   2344999999999999999753

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.20  E-value=2.9e-11  Score=113.50  Aligned_cols=88  Identities=16%  Similarity=0.135  Sum_probs=76.8

Q ss_pred             cCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCC----CCchhHHHHHHHHhhhCCCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAG----SVTGIFFARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~----~~~~~~f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ..|...+.||+|||..+|+             +.. ..|..||+|++++.    ..+.++..+|+++.++|+|||||+++
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe-------------~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~   84 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYE-------------ARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFY   84 (592)
T ss_pred             ceeeeeeeeccCcceEEEE-------------EEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeee
Confidence            3477789999999999999             765 57999999999863    23333399999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCcccccc
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~  258 (282)
                       ++..+.++.| ||.|++++|+|.+++.
T Consensus        85 -~~FEDs~nVY-ivLELC~~~sL~el~K  110 (592)
T KOG0575|consen   85 -HFFEDSNNVY-IVLELCHRGSLMELLK  110 (592)
T ss_pred             -eEeecCCceE-EEEEecCCccHHHHHH
Confidence             9999999999 9999999999999886

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.19  E-value=1.2e-11  Score=107.28  Aligned_cols=103  Identities=18%  Similarity=0.225  Sum_probs=85.7

Q ss_pred             HhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceecc
Q 043820          153 NATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       153 ~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      ++..+|+..+.||.|+||.||+             +...++..+|+|.+......... +.+|+.++..++|+||++++ 
T Consensus         3 ~~~~~y~~~~~ig~g~~~~vy~-------------~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~-   68 (261)
T cd05148           3 RPREEFTLERKLGSGYFGEVWE-------------GLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLF-   68 (261)
T ss_pred             CcHHHHHHhhhhccCCCccEEE-------------eEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhhee-
Confidence            4556678889999999999999             88777889999998765443444 99999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      +.+......+ ++|||+++|+|.+++.+... ..++|.+.
T Consensus        69 ~~~~~~~~~~-lv~e~~~~~~L~~~~~~~~~-~~~~~~~~  106 (261)
T cd05148          69 AVCSVGEPVY-IITELMEKGSLLAFLRSPEG-QVLPVASL  106 (261)
T ss_pred             eeEecCCCeE-EEEeecccCCHHHHHhcCCC-CCCCHHHH
Confidence            9998888888 99999999999999976442 34566544

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.18  E-value=2.1e-11  Score=110.98  Aligned_cols=98  Identities=19%  Similarity=0.249  Sum_probs=74.8

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCch-hH-HHHHHHHhhhC-CCCccceec
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTG-IF-FARSVTEVAKI-YARSRPRSY  230 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l-~H~nlv~l~  230 (282)
                      +.++|...+.||+|+||.||++...+.       .....+..||+|.++...... .. +.+|+.++.++ +|+||++++
T Consensus         5 ~~~~~~~~~~lG~G~fg~V~~~~~~~~-------~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~   77 (343)
T cd05103           5 PRDRLKLGKPLGRGAFGQVIEADAFGI-------DKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL   77 (343)
T ss_pred             chhHhcccccccCCccceEEEEeeccC-------CccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhc
Confidence            345677789999999999999332211       123356789999997543333 33 88999999999 789999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                       |++...+..++++|||+++|+|.++|..
T Consensus        78 -~~~~~~~~~~~lv~ey~~~g~L~~~i~~  105 (343)
T cd05103          78 -GACTKPGGPLMVIVEFCKFGNLSNYLRS  105 (343)
T ss_pred             -ceeecCCCceEEEEeccCCCcHHHHHHh
Confidence             9887655444499999999999999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.18  E-value=4.8e-11  Score=104.18  Aligned_cols=96  Identities=13%  Similarity=0.114  Sum_probs=82.7

Q ss_pred             HHHHhccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccc
Q 043820          150 TIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRP  227 (282)
Q Consensus       150 el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv  227 (282)
                      |++.+++++.....||+|+||.||+             +... ++..||+|.+........+ +.+|+.++..++|+||+
T Consensus         2 ~~~~~~~~~~~~~~lg~g~~g~v~~-------------~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv   68 (268)
T cd06624           2 EYEYEYDENGERVVLGKGTYGIVYA-------------ARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIV   68 (268)
T ss_pred             CcccccccCCceEEEecCCceEEEE-------------eEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCee
Confidence            3556788888889999999999999             7754 5778999998765555555 99999999999999999


Q ss_pred             eeccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          228 RSYPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       228 ~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +++ |++..++..+ +++||+++++|.+++...
T Consensus        69 ~~~-~~~~~~~~~~-lv~e~~~~~~L~~~l~~~   99 (268)
T cd06624          69 QYL-GSDSENGFFK-IFMEQVPGGSLSALLRSK   99 (268)
T ss_pred             eee-eeeccCCEEE-EEEecCCCCCHHHHHHHh
Confidence            999 9999888888 999999999999998754

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.17  E-value=5.9e-11  Score=105.77  Aligned_cols=102  Identities=20%  Similarity=0.174  Sum_probs=73.1

Q ss_pred             cCccccceecccCccceeccccccccccccce---e-ecCCCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCcccee
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTIT---G-ARIDARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~---g-~~~~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      +.|...++||+|+||.||++....-.......   . ....+..||+|.+....... .. |.+|+.++.+++|+||+++
T Consensus         5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~   84 (304)
T cd05096           5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL   84 (304)
T ss_pred             hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence            35666789999999999993211000000000   0 00123479999987543332 33 9999999999999999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      + |++...+..+ +||||+++|+|.++|..
T Consensus        85 ~-~~~~~~~~~~-lv~e~~~~~~L~~~l~~  112 (304)
T cd05096          85 L-GVCVDEDPLC-MITEYMENGDLNQFLSS  112 (304)
T ss_pred             E-EEEecCCceE-EEEecCCCCcHHHHHHh
Confidence            9 9998888877 99999999999998854

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.17  E-value=3.3e-11  Score=104.69  Aligned_cols=99  Identities=19%  Similarity=0.246  Sum_probs=81.3

Q ss_pred             cCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccceE
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSVV  234 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~~  234 (282)
                      ++|...++||+|+||.||+             +...++..||+|.+..... ..+ |.+|+.++..++|+||++++ +.+
T Consensus         6 ~~~~~~~~lg~g~~g~v~~-------------~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~-~~~   70 (261)
T cd05072           6 ESIKLVKKLGAGQFGEVWM-------------GYYNNSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLY-AVV   70 (261)
T ss_pred             HHeEEeeecCCcCCceEEE-------------EEecCCceEEEEEccCCch-hHHHHHHHHHHHHhCCCCCeeeEE-EEE
Confidence            4677789999999999999             8877778899999865333 334 99999999999999999999 998


Q ss_pred             eeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          235 IRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       235 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      ...+..+ ++|||+++|+|.+++.... ...++|.++
T Consensus        71 ~~~~~~~-lv~e~~~~~~L~~~l~~~~-~~~~~~~~~  105 (261)
T cd05072          71 TKEEPIY-IITEYMAKGSLLDFLKSDE-GGKVLLPKL  105 (261)
T ss_pred             cCCCCcE-EEEecCCCCcHHHHHHHhc-CCCCCHHHH
Confidence            8888888 9999999999999987543 224555544

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.16  E-value=3.7e-11  Score=104.49  Aligned_cols=102  Identities=20%  Similarity=0.217  Sum_probs=83.4

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccc
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      +.++|...+.||+|++|.||+             +...++..||+|.+..... ..+ |.+|+.++.+++|+|++++. +
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~-------------~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~-~   68 (261)
T cd05068           4 DRTSIQLLRKLGAGQFGEVWE-------------GLWNNTTPVAVKTLKPGTM-DPKDFLAEAQIMKKLRHPKLIQLY-A   68 (261)
T ss_pred             chhheeeEEEecccCCccEEE-------------EEecCCeEEEEEeeCCCcc-cHHHHHHHHHHHHHCCCCCcccee-E
Confidence            345677789999999999999             8776678899999875433 334 99999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      ++...+..+ ++|||+++++|.+++.... ...++|....
T Consensus        69 ~~~~~~~~~-lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~  106 (261)
T cd05068          69 VCTLEEPIY-IVTELMKYGSLLEYLQGGA-GRALKLPQLI  106 (261)
T ss_pred             EEecCCCee-eeeecccCCcHHHHHhccC-CCCCCHHHHH
Confidence            988888888 9999999999999997543 2346665543

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.16  E-value=2.4e-11  Score=106.93  Aligned_cols=106  Identities=8%  Similarity=-0.020  Sum_probs=73.8

Q ss_pred             eecccCccceecccccccccccccee------------ecCCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCcccee
Q 043820          163 KLGEGGFGPVYKVVAAGICFAGTITG------------ARIDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       163 ~lG~G~fG~Vy~~~~~~~~~~~~~~g------------~~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      .||+|+||.||++....-.......+            .......|++|.+......... |.+|+.+++.++|+||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            58999999999943211000000000            0011246899998754433344 8999999999999999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      + |++......+ +||||+++|+|..++....+  .++|..++
T Consensus        82 ~-~~~~~~~~~~-lv~ey~~~g~L~~~l~~~~~--~~~~~~~~  120 (274)
T cd05076          82 H-GVCVRGSENI-MVEEFVEHGPLDVCLRKEKG--RVPVAWKI  120 (274)
T ss_pred             E-EEEEeCCceE-EEEecCCCCcHHHHHHhcCC--CCCHHHHH
Confidence            9 9999998888 99999999999999865432  34555443

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.14  E-value=5.4e-11  Score=104.46  Aligned_cols=97  Identities=22%  Similarity=0.286  Sum_probs=76.2

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCccceecc
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      ++++|+..+.||+|+||.||++...+.       .....+..||+|.+....... .. |.+|+.++..++|+||++++ 
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~-------~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~-   75 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGV-------VKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL-   75 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccC-------CCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEE-
Confidence            566788889999999999999322211       011235679999986543322 23 99999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +++..+...+ +||||+++|+|.+++..
T Consensus        76 ~~~~~~~~~~-lv~e~~~~~~L~~~~~~  102 (277)
T cd05062          76 GVVSQGQPTL-VIMELMTRGDLKSYLRS  102 (277)
T ss_pred             EEEcCCCCeE-EEEecCCCCCHHHHHHH
Confidence            9998888888 99999999999999865

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.14  E-value=4.6e-11  Score=110.01  Aligned_cols=88  Identities=22%  Similarity=0.255  Sum_probs=70.8

Q ss_pred             cCccccceecccCccceeccccccccccccceee-cCCCcEEEEEEccCCCCch--hH-HHHHHHHhhhCCCCccceecc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGA-RIDARVVAARIVFAGSVTG--IF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~-~~~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      +.|...++||+|.||.||+             +. ...|..||+|++.-.....  .. ..+|+.+|++|.||||++|. 
T Consensus       117 ~~feki~kIGeGTyg~VYk-------------Ar~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~-  182 (560)
T KOG0600|consen  117 DSFEKIEKIGEGTYGQVYK-------------ARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLE-  182 (560)
T ss_pred             HHHHHHHHhcCcchhheeE-------------eeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCccccee-
Confidence            4466668999999999999             65 4468999999997544322  33 78999999999999999999 


Q ss_pred             ceEeeC--CeEEEEEEecCCCCCccccccC
Q 043820          232 SVVIRP--GYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       232 g~~~~~--~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      |...+.  ...| ||+|||+. ||.-++..
T Consensus       183 eivt~~~~~siY-lVFeYMdh-DL~GLl~~  210 (560)
T KOG0600|consen  183 EIVTSKLSGSIY-LVFEYMDH-DLSGLLSS  210 (560)
T ss_pred             eEEEecCCceEE-EEEecccc-hhhhhhcC
Confidence            988876  4566 99999997 67766654

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.14  E-value=8e-11  Score=102.65  Aligned_cols=100  Identities=18%  Similarity=0.179  Sum_probs=80.2

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC----CCcEEEEEEccCCCCchh-H-HHHHHHHhhhCCCCcccee
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI----DARVVAARIVFAGSVTGI-F-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~----~~~~vAvK~l~~~~~~~~-~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      ++|+..+.||+|+||.||+             |...    +...||+|.+........ . |.+|+.++..++|+||+++
T Consensus         4 ~~~~~~~~lg~g~~g~vy~-------------~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~   70 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCR-------------GRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRL   70 (266)
T ss_pred             HHceeeeEecCCccceEEE-------------EEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceE
Confidence            4677889999999999999             7653    245799999875443333 3 9999999999999999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      . +.+...+..+ ++|||+++|+|.+++....  ..++|...+
T Consensus        71 ~-~~~~~~~~~~-iv~e~~~~~~L~~~~~~~~--~~~~~~~~~  109 (266)
T cd05033          71 E-GVVTKSRPVM-IITEYMENGSLDKFLREND--GKFTVGQLV  109 (266)
T ss_pred             e-EEEecCCceE-EEEEcCCCCCHHHHHHhcc--CCCCHHHHH
Confidence            9 9988888888 9999999999999986543  245665543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.14  E-value=1.2e-11  Score=104.25  Aligned_cols=91  Identities=24%  Similarity=0.337  Sum_probs=77.8

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhCCCCcccee
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      .++|..++.||+|.||.||.             +... ++-.||+|++.+..   .+-.. +.+|+++-+.|+||||.++
T Consensus        21 l~dfeigr~LgkgkFG~vYl-------------arekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrl   87 (281)
T KOG0580|consen   21 LDDFEIGRPLGKGKFGNVYL-------------AREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRL   87 (281)
T ss_pred             hhhccccccccCCccccEeE-------------eeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhh
Confidence            35688889999999999999             7765 46789999997542   22233 9999999999999999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      + |+..+....+ |++||.++|+|...|.+.
T Consensus        88 Y-~~fhd~~riy-LilEya~~gel~k~L~~~  116 (281)
T KOG0580|consen   88 Y-GYFHDSKRIY-LILEYAPRGELYKDLQEG  116 (281)
T ss_pred             h-hheeccceeE-EEEEecCCchHHHHHHhc
Confidence            9 9999999999 999999999999999843

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.13  E-value=9e-11  Score=101.18  Aligned_cols=94  Identities=19%  Similarity=0.192  Sum_probs=77.5

Q ss_pred             ceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH--HHHHHHHhhhCCCCccceeccceEeeCCe
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF--FARSVTEVAKIYARSRPRSYPSVVIRPGY  239 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~--f~~e~~~l~~l~H~nlv~l~~g~~~~~~~  239 (282)
                      +.||+|+||.||+             +...++..+|+|.+........+  |.+|+.++..++|+||+++. +.+.....
T Consensus         1 ~~ig~g~~g~vy~-------------~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~-~~~~~~~~   66 (250)
T cd05085           1 ELLGKGNFGEVFK-------------GTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLI-GVCTQRQP   66 (250)
T ss_pred             CccCCCCCceEEE-------------EEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEE-EEEecCCc
Confidence            3689999999999             88777889999998765444333  99999999999999999999 99988888


Q ss_pred             EEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          240 KVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       240 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      .+ +||||+++|+|.+++....  ..++|...+
T Consensus        67 ~~-lv~e~~~~~~L~~~~~~~~--~~~~~~~~~   96 (250)
T cd05085          67 IY-IVMELVPGGDFLSFLRKKK--DELKTKQLV   96 (250)
T ss_pred             cE-EEEECCCCCcHHHHHHhcC--CCCCHHHHH
Confidence            88 9999999999999986533  235665544

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.13  E-value=1.4e-10  Score=105.09  Aligned_cols=91  Identities=14%  Similarity=0.148  Sum_probs=77.0

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCccceecc
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      .++|+..++||+|+||.||+             +... .+..+|+|.+....... .. +.+|+.++..++|+||++++ 
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~-------------~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~-   69 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFK-------------VSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFY-   69 (333)
T ss_pred             hhhhheeccccCCCCEEEEE-------------EEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCccccee-
Confidence            35688889999999999999             7654 57889999886543322 23 99999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +++...+..+ +||||+++|+|.+++...
T Consensus        70 ~~~~~~~~~~-lv~e~~~~~~L~~~l~~~   97 (333)
T cd06650          70 GAFYSDGEIS-ICMEHMDGGSLDQVLKKA   97 (333)
T ss_pred             EEEEECCEEE-EEEecCCCCcHHHHHHHc
Confidence            9999988888 999999999999998643

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.13  E-value=9.6e-11  Score=108.17  Aligned_cols=89  Identities=15%  Similarity=0.146  Sum_probs=74.7

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC---chhH-HHHHHHHhhhCCCCccceecc
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV---TGIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~---~~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      .|...+.||+|+||.||+             +... .+..||+|.+.....   .... +.+|+.++..++|+|||+++ 
T Consensus         2 ~f~~~~~LG~G~~g~Vy~-------------~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~-   67 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCL-------------ACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLY-   67 (381)
T ss_pred             CceEEEEEeecCCEEEEE-------------EEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeE-
Confidence            467778999999999999             7644 578999999965321   2233 89999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +.+.+.+..+ +||||+++|+|.+++...
T Consensus        68 ~~~~~~~~~~-lv~E~~~gg~L~~~l~~~   95 (381)
T cd05626          68 YSFQDKDNLY-FVMDYIPGGDMMSLLIRM   95 (381)
T ss_pred             EEEecCCEEE-EEEecCCCCcHHHHHHhc
Confidence            9998888888 999999999999998653

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.12  E-value=9.1e-11  Score=101.82  Aligned_cols=103  Identities=17%  Similarity=0.238  Sum_probs=83.3

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhHHHHHHHHhhhCCCCccceeccce
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      ..++|...+.||+|+||.||+             +...++..+|+|.+.........+.+|+.++.+++|+|+++++ +.
T Consensus         4 ~~~~~~i~~~ig~g~~~~v~~-------------~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~-~~   69 (261)
T cd05034           4 PRESLKLERKLGAGQFGEVWM-------------GTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLY-AV   69 (261)
T ss_pred             chhheeeeeeeccCcceEEEE-------------EEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeee-ee
Confidence            456788889999999999999             8776778899999875433332399999999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      +......+ ++|||+++++|.+++.... ...++|.+..
T Consensus        70 ~~~~~~~~-~v~e~~~~~~L~~~i~~~~-~~~~~~~~~~  106 (261)
T cd05034          70 CSEEEPIY-IVTEYMSKGSLLDFLKSGE-GKKLRLPQLV  106 (261)
T ss_pred             eecCCceE-EEEeccCCCCHHHHHhccc-cCCCCHHHHH
Confidence            88777777 9999999999999997643 2245665443

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.11  E-value=1e-10  Score=101.63  Aligned_cols=101  Identities=20%  Similarity=0.175  Sum_probs=80.3

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhHHHHHHHHhhhCCCCccceeccceE
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRPRSYPSVV  234 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~nlv~l~~g~~  234 (282)
                      .++|...++||+|+||.||+             +...++..||+|.+.........|.+|+.++..++|+|++++. +..
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~-------------~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~-~~~   70 (260)
T cd05067           5 RETLKLVKKLGAGQFGEVWM-------------GYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLY-AVV   70 (260)
T ss_pred             hHHceeeeeeccCccceEEe-------------eecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEE-EEE
Confidence            34577779999999999999             8877889999999875444333399999999999999999999 875


Q ss_pred             eeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          235 IRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       235 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                       ..+..+ ++|||+++|+|.+++.... ...++|.+++
T Consensus        71 -~~~~~~-~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~  105 (260)
T cd05067          71 -TQEPIY-IITEYMENGSLVDFLKTPE-GIKLTINKLI  105 (260)
T ss_pred             -ccCCcE-EEEEcCCCCCHHHHHHhcC-CCCCCHHHHH
Confidence             445566 9999999999999986544 2345665543

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.11  E-value=2e-10  Score=103.94  Aligned_cols=91  Identities=14%  Similarity=0.116  Sum_probs=76.8

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCccceecc
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      .++|+..+.||+|+||.||+             +... .+..+|+|.+....... .+ +.+|+.+|.+++|+||++++ 
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~-   69 (331)
T cd06649           4 DDDFERISELGAGNGGVVTK-------------VQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFY-   69 (331)
T ss_pred             cccceEEEeecCCCCEEEEE-------------EEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEE-
Confidence            35678889999999999999             6654 57889999987543322 33 99999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +++...+..+ +||||+++|+|.+++...
T Consensus        70 ~~~~~~~~~~-lv~e~~~~~~L~~~l~~~   97 (331)
T cd06649          70 GAFYSDGEIS-ICMEHMDGGSLDQVLKEA   97 (331)
T ss_pred             EEEEECCEEE-EEeecCCCCcHHHHHHHc
Confidence            9998888888 999999999999998653

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.11  E-value=1.1e-10  Score=103.29  Aligned_cols=92  Identities=20%  Similarity=0.266  Sum_probs=75.9

Q ss_pred             HhccCccccceecccCccceeccccccccccccceeecC------CCcEEEEEEccCCCCchh-H-HHHHHHHhhhCCCC
Q 043820          153 NATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI------DARVVAARIVFAGSVTGI-F-FARSVTEVAKIYAR  224 (282)
Q Consensus       153 ~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~------~~~~vAvK~l~~~~~~~~-~-f~~e~~~l~~l~H~  224 (282)
                      ..+++|+..+.||+|+||.||+             |...      .+..||+|.+........ . +.+|+.++..++|+
T Consensus         3 ~~~~~~~i~~~lg~G~~g~Vy~-------------~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~   69 (288)
T cd05061           3 VSREKITLLRELGQGSFGMVYE-------------GNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH   69 (288)
T ss_pred             ccHHHceeeeeecCCCCcEEEE-------------EEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCC
Confidence            3456788889999999999999             5432      245899999875433333 3 89999999999999


Q ss_pred             ccceeccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          225 SRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       225 nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      |+++++ +.+..+...+ +||||+++|+|.+++..
T Consensus        70 ~i~~~~-~~~~~~~~~~-lv~e~~~~g~L~~~l~~  102 (288)
T cd05061          70 HVVRLL-GVVSKGQPTL-VVMELMAHGDLKSYLRS  102 (288)
T ss_pred             CeeeEE-EEEcCCCCcE-EEEeCCCCCCHHHHHHH
Confidence            999999 9998888888 99999999999999964

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.10  E-value=9.9e-11  Score=107.10  Aligned_cols=90  Identities=18%  Similarity=0.184  Sum_probs=75.7

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhCCCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ++|+..+.||+|+||.||+             +... .+..||+|.+....   ..... +.+|+.++..++|+||++++
T Consensus         1 ~~y~~~~~lG~G~~g~V~~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~   67 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRL-------------VQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLY   67 (364)
T ss_pred             CCceEEEEEEecCCEEEEE-------------EEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceE
Confidence            3677889999999999999             7654 57899999986432   12233 88999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                       +.+..++..+ +||||+++|+|.+++...
T Consensus        68 -~~~~~~~~~~-lv~E~~~~g~L~~~l~~~   95 (364)
T cd05599          68 -YSFQDENYLY-LIMEYLPGGDMMTLLMKK   95 (364)
T ss_pred             -EEEEcCCeEE-EEECCCCCcHHHHHHHHc
Confidence             9998888888 999999999999998653

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.10  E-value=1.1e-10  Score=101.53  Aligned_cols=99  Identities=17%  Similarity=0.166  Sum_probs=79.4

Q ss_pred             CccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhHHHHHHHHhhhCCCCccceeccceEee
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRPRSYPSVVIR  236 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~nlv~l~~g~~~~  236 (282)
                      +|.....||+|+||.||.             +...++..+|+|.+.........|.+|+.++.+++||||++++ |++..
T Consensus         5 ~~~~~~~lg~G~~~~vy~-------------~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~-~~~~~   70 (256)
T cd05113           5 DLTFLKELGTGQFGVVKY-------------GKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLY-GVCTK   70 (256)
T ss_pred             HeEEeeEecCcccceEEE-------------EEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEE-EEEcc
Confidence            455668999999999999             7766666799999875433222299999999999999999999 99988


Q ss_pred             CCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          237 PGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       237 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      ....+ ++|||+++|+|.+++....  ..++|...+
T Consensus        71 ~~~~~-lv~e~~~~~~l~~~i~~~~--~~~~~~~~~  103 (256)
T cd05113          71 QRPIY-IVTEYMSNGCLLNYLREHG--KRFQPSQLL  103 (256)
T ss_pred             CCCcE-EEEEcCCCCcHHHHHHhcC--CCCCHHHHH
Confidence            88777 9999999999999986533  245665544

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.09  E-value=1.7e-10  Score=106.23  Aligned_cols=88  Identities=17%  Similarity=0.214  Sum_probs=74.0

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhCCCCccceecc
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      +|...+.||+|+||.||+             +... ++..||+|.+....   ..... +.+|+.++..++|+|||+++ 
T Consensus         2 ~y~~~~~lG~G~~g~Vy~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~-   67 (377)
T cd05629           2 DFHTVKVIGKGAFGEVRL-------------VQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLY-   67 (377)
T ss_pred             CceEeEEEeecCCEEEEE-------------EEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEE-
Confidence            577779999999999999             6543 57899999886422   12223 88999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +.+.++...+ +||||+++|+|.+++..
T Consensus        68 ~~~~~~~~~~-lv~E~~~gg~L~~~l~~   94 (377)
T cd05629          68 YSFQDAQYLY-LIMEFLPGGDLMTMLIK   94 (377)
T ss_pred             EEEEcCCeeE-EEEeCCCCCcHHHHHHh
Confidence            9998888888 99999999999998864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.09  E-value=2.3e-10  Score=101.96  Aligned_cols=93  Identities=14%  Similarity=0.143  Sum_probs=76.7

Q ss_pred             ccCHHHHHHhccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchh-H-HHHHHHHhhhC
Q 043820          145 LFELATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGI-F-FARSVTEVAKI  221 (282)
Q Consensus       145 ~~~~~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~-~-f~~e~~~l~~l  221 (282)
                      .+++++|+.-       +.||+|..|+||+             +... .+..+|+|.+........ + ..+|++++.+.
T Consensus        75 ~i~~~dle~~-------~~lG~G~gG~V~k-------------v~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~  134 (364)
T KOG0581|consen   75 GISLSDLERL-------GVLGSGNGGTVYK-------------VRHKPTGKIYALKVILLNIDPALQKQILRELEILRSC  134 (364)
T ss_pred             ccCHHHhhhh-------hhcccCCCcEEEE-------------EEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhC
Confidence            3556666544       8999999999999             6654 578899999954433333 3 99999999999


Q ss_pred             CCCccceeccceEeeCCe-EEEEEEecCCCCCccccccC
Q 043820          222 YARSRPRSYPSVVIRPGY-KVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       222 ~H~nlv~l~~g~~~~~~~-~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +||+||+++ |.+..+.. .. ++||||.+|||++++..
T Consensus       135 ~spyIV~~y-gaF~~~~~~is-I~mEYMDgGSLd~~~k~  171 (364)
T KOG0581|consen  135 QSPYIVGFY-GAFYSNGEEIS-ICMEYMDGGSLDDILKR  171 (364)
T ss_pred             CCCCeeeEe-EEEEeCCceEE-eehhhcCCCCHHHHHhh
Confidence            999999999 99988884 77 99999999999999864

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.09  E-value=1.1e-10  Score=103.51  Aligned_cols=89  Identities=12%  Similarity=0.079  Sum_probs=74.7

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC---chhH-HHHHHHHhhhCCCCccceecc
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV---TGIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~---~~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      +|...+.||+|+||.||+             +... ++..||+|.+.....   ...+ +.+|+.++..++||||++++ 
T Consensus         2 ~y~~~~~lg~G~~g~Vy~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~-   67 (291)
T cd05612           2 DLERIKTVGTGTFGRVHL-------------VRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLF-   67 (291)
T ss_pred             CceeeeeeecCCCeEEEE-------------EEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhH-
Confidence            567779999999999999             7654 578999999864321   2233 88999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +.+.+....+ +||||+++|+|.+++...
T Consensus        68 ~~~~~~~~~~-lv~e~~~~~~L~~~~~~~   95 (291)
T cd05612          68 WTEHDQRFLY-MLMEYVPGGELFSYLRNS   95 (291)
T ss_pred             hhhccCCeEE-EEEeCCCCCCHHHHHHHc
Confidence            9988888888 999999999999998653

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.08  E-value=1.8e-10  Score=104.17  Aligned_cols=89  Identities=16%  Similarity=0.204  Sum_probs=75.4

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC---chhH-HHHHHHHhhhCCCCccceecc
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV---TGIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~---~~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      +|...+.||+|+||.||+             +... .+..||+|.+.....   .... +.+|+.++..++|+||++++ 
T Consensus         2 ~y~~~~~ig~G~~g~Vy~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~-   67 (333)
T cd05600           2 DFQILTQVGQGGYGQVFL-------------AKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLL-   67 (333)
T ss_pred             CcEEEEEEeecCCeEEEE-------------EEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEE-
Confidence            577789999999999999             7765 478999999864321   2233 88999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +.+..++..+ +||||+++|+|.+++...
T Consensus        68 ~~~~~~~~~~-lv~e~~~g~~L~~~l~~~   95 (333)
T cd05600          68 YAFQDDEYLY-LAMEYVPGGDFRTLLNNL   95 (333)
T ss_pred             EEEEcCCEEE-EEEeCCCCCCHHHHHHHc
Confidence            9998888888 999999999999998643

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.08  E-value=7.1e-11  Score=111.29  Aligned_cols=89  Identities=19%  Similarity=0.260  Sum_probs=72.0

Q ss_pred             CccccceecccCccceeccccccccccccceeecCC-----CcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCcccee
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARID-----ARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~-----~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      .....+.||+|.||.||+             |.+.+     ...||||+-+.....+ .+ |+.|+.+|++++|||||+|
T Consensus       390 ~Itl~r~iG~GqFGdVy~-------------gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikL  456 (974)
T KOG4257|consen  390 LITLKRLIGEGQFGDVYK-------------GVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKL  456 (974)
T ss_pred             hccHHHhhcCCcccceee-------------eEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhhe
Confidence            345568899999999999             65432     3568999987644433 34 9999999999999999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccCCC
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      + |+|.+.+ .+ +|||+++.|.|..||..++
T Consensus       457 I-Gv~~e~P-~W-ivmEL~~~GELr~yLq~nk  485 (974)
T KOG4257|consen  457 I-GVCVEQP-MW-IVMELAPLGELREYLQQNK  485 (974)
T ss_pred             e-eeeeccc-ee-EEEecccchhHHHHHHhcc
Confidence            9 9997554 45 9999999999999997654

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.08  E-value=1.8e-10  Score=100.63  Aligned_cols=100  Identities=15%  Similarity=0.122  Sum_probs=78.6

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC----CCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCcccee
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI----DARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~----~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      .+|...+.||+|+||.||+             +...    ....+|+|.+....... .+ |.+|+.++..++||||+++
T Consensus         4 ~~~~~~~~lg~g~~g~v~~-------------~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~   70 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCS-------------GRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHL   70 (267)
T ss_pred             HHeEeeeeecccCCCceEE-------------EEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence            3566779999999999999             7642    23479999987543333 23 9999999999999999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      . +++..++..+ ++|||+++|+|.+++....  ..++|.+.+
T Consensus        71 ~-~~~~~~~~~~-lv~e~~~~~~L~~~~~~~~--~~~~~~~~~  109 (267)
T cd05066          71 E-GVVTKSKPVM-IVTEYMENGSLDAFLRKHD--GQFTVIQLV  109 (267)
T ss_pred             E-EEEecCCccE-EEEEcCCCCCHHHHHHhcC--CCCCHHHHH
Confidence            9 9998888888 9999999999999996543  235555443

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.08  E-value=2e-10  Score=105.93  Aligned_cols=89  Identities=16%  Similarity=0.151  Sum_probs=74.4

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC---chhH-HHHHHHHhhhCCCCccceecc
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV---TGIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~---~~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      .|...+.||+|+||.||+             +... .+..+|+|.+.....   .... +.+|+.++..++|+|||+++ 
T Consensus         2 ~f~~~~~LG~G~~g~Vy~-------------a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~-   67 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCL-------------ARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLY-   67 (382)
T ss_pred             CcEEEEEEEeCCCEEEEE-------------EEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEE-
Confidence            467779999999999999             7643 578999999864321   1223 88999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +.+.+++..+ +||||+++|+|.+++...
T Consensus        68 ~~~~~~~~~~-lv~E~~~gg~L~~~l~~~   95 (382)
T cd05625          68 YSFQDKDNLY-FVMDYIPGGDMMSLLIRM   95 (382)
T ss_pred             EEEEeCCEEE-EEEeCCCCCcHHHHHHhc
Confidence            9998888888 999999999999988653

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.08  E-value=1.5e-10  Score=104.69  Aligned_cols=90  Identities=12%  Similarity=0.127  Sum_probs=75.8

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhCCCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ++|...+.||+|+||.||+             +... ++..||+|.+....   ....+ +.+|+.++.+++|+||++++
T Consensus        18 ~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~   84 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRI-------------AKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMM   84 (329)
T ss_pred             hheEEEEEEEecCCeEEEE-------------EEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEE
Confidence            4577779999999999999             7654 57899999986432   12233 89999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                       +.+...+..+ +||||+++|+|.+++...
T Consensus        85 -~~~~~~~~~~-lv~e~~~~~~L~~~l~~~  112 (329)
T PTZ00263         85 -CSFQDENRVY-FLLEFVVGGELFTHLRKA  112 (329)
T ss_pred             -EEEEcCCEEE-EEEcCCCCChHHHHHHHc
Confidence             9998888888 999999999999998654

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.08  E-value=2.1e-10  Score=105.61  Aligned_cols=89  Identities=13%  Similarity=0.114  Sum_probs=74.6

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC---chhH-HHHHHHHhhhCCCCccceecc
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV---TGIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~---~~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      +|...+.||+|+||.||+             +... .+..||+|.+.....   .... +.+|+.+|..++|+||++++ 
T Consensus         2 ~y~~~~~lG~G~~g~V~~-------------a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~-   67 (376)
T cd05598           2 MFVKIKTIGIGAFGEVCL-------------VRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLY-   67 (376)
T ss_pred             CceEEEEEEeCCCeEEEE-------------EEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEE-
Confidence            577789999999999999             6644 578999999864321   2233 88999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +.+.+++..+ +||||+++|+|.++|...
T Consensus        68 ~~~~~~~~~~-lv~E~~~~g~L~~~i~~~   95 (376)
T cd05598          68 YSFQDKDNLY-FVMDYIPGGDMMSLLIRL   95 (376)
T ss_pred             EEEEcCCEEE-EEEeCCCCCcHHHHHHhc
Confidence            9988888888 999999999999998653

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.07  E-value=3.5e-10  Score=101.15  Aligned_cols=90  Identities=14%  Similarity=0.112  Sum_probs=75.4

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCccceeccc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      ++|...+.||+|+||.||+             +... .+..+|+|.+....... .. +.+|+.++.+++|+||++++ +
T Consensus         1 ~~~~~~~~lg~G~~g~v~~-------------~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~-~   66 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTK-------------VLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFY-G   66 (308)
T ss_pred             CCceEEeeccCCCCeEEEE-------------EEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEE-E
Confidence            3577789999999999999             6644 57789999886433222 23 88999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ++..++..+ ++|||+++|+|.+++...
T Consensus        67 ~~~~~~~~~-lv~ey~~~~~L~~~l~~~   93 (308)
T cd06615          67 AFYSDGEIS-ICMEHMDGGSLDQVLKKA   93 (308)
T ss_pred             EEeeCCEEE-EEeeccCCCcHHHHHHhc
Confidence            999988888 999999999999998653

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.07  E-value=2.2e-10  Score=100.82  Aligned_cols=100  Identities=16%  Similarity=0.161  Sum_probs=78.0

Q ss_pred             cCccccceecccCccceeccccccccccccceeec-----CCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCcccee
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-----IDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-----~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      .+|...+.||+|+||.||+             +..     ..+..||+|.+........+ |.+|+.++..++|+|++++
T Consensus         4 ~~~~~~~~lg~g~~g~v~~-------------~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~   70 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVEL-------------CRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKY   70 (284)
T ss_pred             ccceeeeeccCCCCceEEE-------------EEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEE
Confidence            3566678999999999999             542     24788999998765444455 9999999999999999999


Q ss_pred             ccceEeeC--CeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          230 YPSVVIRP--GYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       230 ~~g~~~~~--~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      . +++...  ...+ +|+||+++|+|.+++....  ..++|..+.
T Consensus        71 ~-~~~~~~~~~~~~-lv~e~~~~~~L~~~l~~~~--~~l~~~~~~  111 (284)
T cd05081          71 K-GVCYSAGRRNLR-LVMEYLPYGSLRDYLQKHR--ERLDHRKLL  111 (284)
T ss_pred             E-EEEccCCCCceE-EEEEecCCCCHHHHHHhcC--cCCCHHHHH
Confidence            9 987543  3455 9999999999999986432  246666543

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.07  E-value=6.6e-11  Score=112.83  Aligned_cols=90  Identities=19%  Similarity=0.303  Sum_probs=73.6

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCccceeccceE
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPRSYPSVV  234 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~l~~g~~  234 (282)
                      +...+.||+|+||.||+             |... .|..||||..+..... ..+ +.+|+++|++++|+|||++. +.-
T Consensus        15 W~~~e~LG~Ga~g~V~r-------------grnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f-~ie   80 (732)
T KOG4250|consen   15 WEMDERLGKGAFGNVYR-------------GRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLF-DIE   80 (732)
T ss_pred             eeehhhhcCCccceeee-------------ecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhc-ccC
Confidence            34447899999999999             8744 5899999999764433 334 99999999999999999998 764


Q ss_pred             ee------CCeEEEEEEecCCCCCccccccCCCC
Q 043820          235 IR------PGYKVGLILELKPDPDPNPDRLHSSR  262 (282)
Q Consensus       235 ~~------~~~~~~lv~Ey~~~GsL~~~l~~~~~  262 (282)
                      .+      ...++ +||||+.+|||...|.+..+
T Consensus        81 e~~~~~~~~~~~v-lvmEyC~gGsL~~~L~~PEN  113 (732)
T KOG4250|consen   81 ETKFLGLVTRLPV-LVMEYCSGGSLRKVLNSPEN  113 (732)
T ss_pred             CccccCcccccce-EEEeecCCCcHHHHhcCccc
Confidence            43      33567 99999999999999987665

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.06  E-value=2.3e-10  Score=104.84  Aligned_cols=90  Identities=16%  Similarity=0.145  Sum_probs=75.0

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC---chhH-HHHHHHHhhhCCCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV---TGIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~---~~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ++|+..+.||+|+||.||+             +... .+..||+|.+.....   .... +.+|+.++..++|+||++++
T Consensus         1 ~~y~~~~~LG~G~~g~V~~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~   67 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRL-------------VQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMF   67 (363)
T ss_pred             CCceEeEEEEeCCCEEEEE-------------EEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEE
Confidence            3677789999999999999             7544 578999999864321   1223 88899999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                       +.+.+....+ +||||+++|+|.+++...
T Consensus        68 -~~~~~~~~~~-lv~E~~~gg~L~~~l~~~   95 (363)
T cd05628          68 -YSFQDKLNLY-LIMEFLPGGDMMTLLMKK   95 (363)
T ss_pred             -EEEecCCeEE-EEEcCCCCCcHHHHHHhc
Confidence             9988888888 999999999999998653

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.06  E-value=1.5e-10  Score=105.21  Aligned_cols=99  Identities=19%  Similarity=0.242  Sum_probs=74.4

Q ss_pred             HhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCch-hH-HHHHHHHhhhC-CCCcccee
Q 043820          153 NATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTG-IF-FARSVTEVAKI-YARSRPRS  229 (282)
Q Consensus       153 ~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l-~H~nlv~l  229 (282)
                      .+.+.|...+.||+|+||.||++...+.       +....+..||+|++....... .+ +..|+.++.++ +|+||+++
T Consensus         4 ~~~~~~~i~~~lG~G~fg~Vy~a~~~~~-------~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~   76 (337)
T cd05054           4 FPRDRLKLGKPLGRGAFGKVIQASAFGI-------EKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNL   76 (337)
T ss_pred             cCHHHhhhhcccccCcCceEEecccccc-------ccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhhe
Confidence            3445677889999999999999322211       112235789999987543333 23 88999999999 89999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      + +.|...+..+++++||+++|+|.++|..
T Consensus        77 ~-~~~~~~~~~~~~v~ey~~~~~L~~~i~~  105 (337)
T cd05054          77 L-GACTKPGGPLMVIVEYCKFGNLSNYLRS  105 (337)
T ss_pred             e-eeEecCCCCEEEEEecCCCCCHHHHHHh
Confidence            9 9887655444499999999999999864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.06  E-value=3.3e-10  Score=99.05  Aligned_cols=84  Identities=14%  Similarity=0.133  Sum_probs=69.7

Q ss_pred             ceecccCccceeccccccccccccceeecC---CCcEEEEEEccCCCCchh-H-HHHHHHHhhhCCCCccceeccceEee
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARI---DARVVAARIVFAGSVTGI-F-FARSVTEVAKIYARSRPRSYPSVVIR  236 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~---~~~~vAvK~l~~~~~~~~-~-f~~e~~~l~~l~H~nlv~l~~g~~~~  236 (282)
                      +.||+|+||.||+             |...   .+..+|+|.+........ . |.+|+.++..++|+|+++++ |.+.+
T Consensus         1 ~~lg~G~~g~Vy~-------------~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~-~~~~~   66 (269)
T cd05087           1 KEIGNGWFGKVIL-------------GEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCL-GQCTE   66 (269)
T ss_pred             CcccccCCceEEE-------------EEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEE-EEEcC
Confidence            3689999999999             7543   245799998875443333 3 99999999999999999999 99988


Q ss_pred             CCeEEEEEEecCCCCCccccccCC
Q 043820          237 PGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       237 ~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ....+ +||||+++|+|.++|...
T Consensus        67 ~~~~~-lv~e~~~~g~L~~~l~~~   89 (269)
T cd05087          67 VTPYL-LVMEFCPLGDLKGYLRSC   89 (269)
T ss_pred             CCCcE-EEEECCCCCcHHHHHHHh
Confidence            88888 999999999999999753

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.06  E-value=2.1e-10  Score=99.57  Aligned_cols=98  Identities=16%  Similarity=0.124  Sum_probs=78.7

Q ss_pred             CccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhHHHHHHHHhhhCCCCccceeccceEee
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRPRSYPSVVIR  236 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~nlv~l~~g~~~~  236 (282)
                      +|...+.||+|+||.||+             +....+..+|+|.+.........|.+|+.++..++|+||+++. +.+..
T Consensus         5 ~~~~~~~lg~G~~~~v~~-------------~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~-~~~~~   70 (256)
T cd05059           5 ELTFLKELGSGQFGVVHL-------------GKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLY-GVCTK   70 (256)
T ss_pred             HcchhhhhccCCCceEEE-------------eEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEE-EEEcC
Confidence            356668999999999999             7766667899999865433333389999999999999999999 99888


Q ss_pred             CCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          237 PGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       237 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      .+..+ +||||+++++|.+++.....  .++|...
T Consensus        71 ~~~~~-lv~e~~~~~~L~~~l~~~~~--~~~~~~~  102 (256)
T cd05059          71 QRPIF-IVTEYMANGCLLNYLRERKG--KLGTEWL  102 (256)
T ss_pred             CCceE-EEEecCCCCCHHHHHHhccc--CCCHHHH
Confidence            88888 99999999999999865332  3555443

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.06  E-value=1.6e-10  Score=108.53  Aligned_cols=97  Identities=16%  Similarity=0.215  Sum_probs=82.0

Q ss_pred             CHHHHHHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH---HHHHHHHhhhCCC
Q 043820          147 ELATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF---FARSVTEVAKIYA  223 (282)
Q Consensus       147 ~~~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~---f~~e~~~l~~l~H  223 (282)
                      +.++|+..-+.+.+...||+|+||+||+             |.+-  ..||||.++......+.   |.+|+..+++-+|
T Consensus       383 s~~~WeIp~~ev~l~~rIGsGsFGtV~R-------------g~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH  447 (678)
T KOG0193|consen  383 SLEEWEIPPEEVLLGERIGSGSFGTVYR-------------GRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRH  447 (678)
T ss_pred             cccccccCHHHhhccceeccccccceee-------------cccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcch
Confidence            3356666666677779999999999999             7653  46999999876555544   9999999999999


Q ss_pred             CccceeccceEeeCCeEEEEEEecCCCCCccccccCCC
Q 043820          224 RSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       224 ~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      .||+-+. |+|..++. + +|..++++-+|+.+||..+
T Consensus       448 ~NIlLFM-G~~~~p~~-A-IiTqwCeGsSLY~hlHv~e  482 (678)
T KOG0193|consen  448 ENILLFM-GACMNPPL-A-IITQWCEGSSLYTHLHVQE  482 (678)
T ss_pred             hhheeee-hhhcCCce-e-eeehhccCchhhhhccchh
Confidence            9999999 99988777 7 9999999999999999754

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.06  E-value=8.1e-12  Score=107.69  Aligned_cols=90  Identities=22%  Similarity=0.376  Sum_probs=71.3

Q ss_pred             CccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchh--H-HHHHHHHhhhCCCCccceeccc-
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGI--F-FARSVTEVAKIYARSRPRSYPS-  232 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~--~-f~~e~~~l~~l~H~nlv~l~~g-  232 (282)
                      +|...++||+|+||.||++            ..+.+|..||.|.+.-......  . ...|+.+|++|+|||||+.+ + 
T Consensus        20 ~y~Il~~IG~GsFg~vykv------------~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy-~~   86 (375)
T KOG0591|consen   20 DYQILKKIGRGSFGEVYKV------------QCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYY-AH   86 (375)
T ss_pred             HHHHHHHHcCCcchheEEe------------eeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHH-HH
Confidence            3556689999999999993            3466899999999874433322  2 99999999999999999999 7 


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ...+..+.+.|||||+..|||.+.|..
T Consensus        87 ~f~~~~evlnivmE~c~~GDLsqmIk~  113 (375)
T KOG0591|consen   87 SFIEDNEVLNIVMELCDAGDLSQMIKH  113 (375)
T ss_pred             hhhccchhhHHHHHhhcccCHHHHHHH
Confidence            444455533499999999999998853

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.06  E-value=2.1e-10  Score=99.81  Aligned_cols=100  Identities=17%  Similarity=0.192  Sum_probs=79.5

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccce
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      .+.|...+.||+|+||.||+             +...++..+|+|.+..... ... |.+|+.++..++|+|++++. +.
T Consensus         5 ~~~~~~~~~lg~g~~~~vy~-------------~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~-~~   69 (260)
T cd05073           5 RESLKLEKKLGAGQFGEVWM-------------ATYNKHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLH-AV   69 (260)
T ss_pred             ccceeEEeEecCccceEEEE-------------EEecCCccEEEEecCCChh-HHHHHHHHHHHHHhcCCCCcceEE-EE
Confidence            34577779999999999999             8766777899998865332 234 99999999999999999999 88


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      ... ...+ ++|||+++|+|.+++.... ...++|.+++
T Consensus        70 ~~~-~~~~-~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~  105 (260)
T cd05073          70 VTK-EPIY-IITEFMAKGSLLDFLKSDE-GSKQPLPKLI  105 (260)
T ss_pred             EcC-CCeE-EEEEeCCCCcHHHHHHhCC-ccccCHHHHH
Confidence            776 5666 9999999999999997543 2346665543

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.06  E-value=3e-10  Score=100.47  Aligned_cols=98  Identities=16%  Similarity=0.124  Sum_probs=77.1

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC---chhH-HHHHHHHhhhCCCCccceecc
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV---TGIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~---~~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      +|+..+.||+|+||.||+             +... ++..||+|.+.....   .... +.+|+.++..++|+||+++. 
T Consensus         1 ~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~-   66 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCA-------------CQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLA-   66 (285)
T ss_pred             CceEEEEEecCCCeEEEE-------------EEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeee-
Confidence            356668999999999999             6643 578999999864322   2233 88999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCc
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPD  270 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~  270 (282)
                      +.+..++..+ +||||+++|+|.+++..... ..+++..
T Consensus        67 ~~~~~~~~~~-lv~e~~~~~~L~~~~~~~~~-~~~~~~~  103 (285)
T cd05605          67 YAYETKDALC-LVLTLMNGGDLKFHIYNMGN-PGFDEER  103 (285)
T ss_pred             eeecCCCeEE-EEEeccCCCcHHHHHHhcCc-CCCCHHH
Confidence            9988888888 99999999999988865331 2355543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.06  E-value=4.8e-10  Score=97.69  Aligned_cols=90  Identities=11%  Similarity=0.141  Sum_probs=76.6

Q ss_pred             cCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      ++|...+.||+|+||.||+             +.. .++..||+|.+......... +.+|+.++.+++|+||+++. +.
T Consensus         9 ~~y~~~~~lg~g~~g~vy~-------------~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~-~~   74 (267)
T cd06646           9 HDYELIQRVGSGTYGDVYK-------------ARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYF-GS   74 (267)
T ss_pred             hhcchhheeecCCCeEEEE-------------EEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeee-EE
Confidence            4577779999999999999             775 46789999998754444445 88999999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccCC
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +...+..+ +|+||+++|+|.+++...
T Consensus        75 ~~~~~~~~-iv~e~~~~~~L~~~~~~~  100 (267)
T cd06646          75 YLSREKLW-ICMEYCGGGSLQDIYHVT  100 (267)
T ss_pred             EEeCCEEE-EEEeCCCCCcHHHHHHhc
Confidence            98888888 999999999999988643

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.05  E-value=2.8e-10  Score=98.30  Aligned_cols=93  Identities=17%  Similarity=0.145  Sum_probs=75.0

Q ss_pred             ceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCccceeccceEeeCC
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPRSYPSVVIRPG  238 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~l~~g~~~~~~  238 (282)
                      +.||+|+||.||+             +... ++..+|+|.+...... ... |.+|+.++..++|+||++++ +++....
T Consensus         1 ~~lg~g~~g~vy~-------------~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~-~~~~~~~   66 (252)
T cd05084           1 ERIGRGNFGEVFS-------------GRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI-GVCTQKQ   66 (252)
T ss_pred             CccCcccCccEEE-------------EEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEE-EEEcCCC
Confidence            3689999999999             7764 5889999987643332 234 99999999999999999999 9998888


Q ss_pred             eEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          239 YKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       239 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      ..+ +||||+++++|.+++....  ..++|...
T Consensus        67 ~~~-lv~e~~~~~~L~~~~~~~~--~~~~~~~~   96 (252)
T cd05084          67 PIY-IVMELVQGGDFLTFLRTEG--PRLKVKEL   96 (252)
T ss_pred             CeE-EEEeeccCCcHHHHHHhCC--CCCCHHHH
Confidence            888 9999999999999986432  23555543

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.05  E-value=2.8e-10  Score=99.19  Aligned_cols=100  Identities=15%  Similarity=0.148  Sum_probs=80.0

Q ss_pred             cCccccceecccCccceeccccccccccccceeecCC-C---cEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCcccee
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARID-A---RVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~-~---~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      ++|+..+.||+|+||.||+             +.... +   ..+|+|.+....... .. |..|+.++..++|+|++++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~-------------~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~   71 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFR-------------GILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRL   71 (268)
T ss_pred             HHceEeeEecCCCCccEEE-------------EEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEE
Confidence            4677779999999999999             76542 2   479999987543332 33 9999999999999999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      . +++...+..+ +||||+++|+|.+++....  ..++|.+++
T Consensus        72 ~-~~~~~~~~~~-lv~e~~~~~~L~~~~~~~~--~~~~~~~~~  110 (268)
T cd05063          72 E-GVVTKFKPAM-IITEYMENGALDKYLRDHD--GEFSSYQLV  110 (268)
T ss_pred             E-EEEccCCCcE-EEEEcCCCCCHHHHHHhcC--CCCCHHHHH
Confidence            9 9998888888 9999999999999986533  246666554

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.05  E-value=5e-11  Score=113.50  Aligned_cols=87  Identities=24%  Similarity=0.326  Sum_probs=72.8

Q ss_pred             cccceecccCccceeccccccccccccceeecC--CC--cEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCccceeccc
Q 043820          159 SINNKLGEGGFGPVYKVVAAGICFAGTITGARI--DA--RVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       159 ~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~--~~--~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      .+.++||+|+||.|++             |.+.  .|  ..||||.+....... .. |++|+.+|-+|+|+|++||+ |
T Consensus       113 ~l~e~LG~GsFgvV~r-------------g~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLy-G  178 (1039)
T KOG0199|consen  113 KLYELLGEGSFGVVKR-------------GTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLY-G  178 (1039)
T ss_pred             HHHHHhcCcceeeEee-------------ccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEe-e
Confidence            3448899999999999             6654  34  468999998765553 33 99999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCCC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      +..+ ...+ +|+|+++.|||.+.|++..
T Consensus       179 vVl~-qp~m-MV~ELaplGSLldrLrka~  205 (1039)
T KOG0199|consen  179 VVLD-QPAM-MVFELAPLGSLLDRLRKAK  205 (1039)
T ss_pred             eecc-chhh-HHhhhcccchHHHHHhhcc
Confidence            9987 5666 9999999999999998743

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.05  E-value=2.4e-10  Score=104.09  Aligned_cols=90  Identities=17%  Similarity=0.106  Sum_probs=74.3

Q ss_pred             cCccccceecccCccceeccccccccccccceeecCC--CcEEEEEEccCCC---CchhH-HHHHHHHhhhCCCCcccee
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARID--ARVVAARIVFAGS---VTGIF-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~--~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      ++|...+.||+|+||.||+             +....  +..||+|.+....   ....+ +.+|+.++..++||||+++
T Consensus        30 ~~y~~~~~ig~G~~g~Vy~-------------a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~   96 (340)
T PTZ00426         30 EDFNFIRTLGTGSFGRVIL-------------ATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNL   96 (340)
T ss_pred             hhcEEEEEEeecCCeEEEE-------------EEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcce
Confidence            4577779999999999999             76432  3689999886432   12233 8899999999999999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      + +++...+..+ +||||+++|+|.+++...
T Consensus        97 ~-~~~~~~~~~~-lv~Ey~~~g~L~~~i~~~  125 (340)
T PTZ00426         97 Y-GSFKDESYLY-LVLEFVIGGEFFTFLRRN  125 (340)
T ss_pred             E-EEEEeCCEEE-EEEeCCCCCcHHHHHHHc
Confidence            9 9998888888 999999999999998654

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.05  E-value=1.9e-10  Score=101.00  Aligned_cols=103  Identities=14%  Similarity=0.094  Sum_probs=79.9

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecCC-----CcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCccc
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARID-----ARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRP  227 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~-----~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv  227 (282)
                      .++|...+.||+|+||.||+             |...+     +..|++|.+....... .+ +.+|+.++..++|+|++
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~-------------~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~   71 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFY-------------GILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNIL   71 (280)
T ss_pred             hhheEEeeeecccCCceEEE-------------EEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCC
Confidence            45677789999999999999             76544     6889999987543333 33 99999999999999999


Q ss_pred             eeccceEeeC-CeEEEEEEecCCCCCccccccCCCCC-----cCCCCCccc
Q 043820          228 RSYPSVVIRP-GYKVGLILELKPDPDPNPDRLHSSRV-----RSLQYPDPA  272 (282)
Q Consensus       228 ~l~~g~~~~~-~~~~~lv~Ey~~~GsL~~~l~~~~~~-----~~l~W~~R~  272 (282)
                      +++ |++... ...+ +++||+++|+|.++|......     ..++|.++.
T Consensus        72 ~~~-~~~~~~~~~~~-~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~  120 (280)
T cd05043          72 PIL-HVCIEDGEPPF-VLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLV  120 (280)
T ss_pred             eEE-EEEecCCCCCE-EEEEcCCCCcHHHHHHhccccccccccCCCHHHHH
Confidence            999 988774 4556 999999999999998654321     345665543

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.04  E-value=2.4e-10  Score=101.98  Aligned_cols=108  Identities=17%  Similarity=0.128  Sum_probs=79.9

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCch-hH-HHHHHHHhhhC-CCCccceecc
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTG-IF-FARSVTEVAKI-YARSRPRSYP  231 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l-~H~nlv~l~~  231 (282)
                      .++|...+.||+|+||.||++...+.       .....+..||+|.+....... .+ +.+|+.++.++ +|+||++++ 
T Consensus        34 ~~~~~~~~~ig~G~~g~V~~~~~~~~-------~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~-  105 (302)
T cd05055          34 RNNLSFGKTLGAGAFGKVVEATAYGL-------SKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLL-  105 (302)
T ss_pred             HHHeEEcceeeccCCeeEEEEEEecC-------CCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEE-
Confidence            35678889999999999999211100       011235689999987543322 33 99999999999 899999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      +.+...+..+ ++|||+++|+|.+++..... ..++|.+..
T Consensus       106 ~~~~~~~~~~-lv~e~~~~~~L~~~i~~~~~-~~l~~~~~~  144 (302)
T cd05055         106 GACTIGGPIL-VITEYCCYGDLLNFLRRKRE-SFLTLEDLL  144 (302)
T ss_pred             EEEecCCceE-EEEEcCCCCcHHHHHHhCCC-CCCCHHHHH
Confidence            9998888888 99999999999999975432 235665443

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.04  E-value=4.6e-10  Score=98.85  Aligned_cols=89  Identities=19%  Similarity=0.186  Sum_probs=73.8

Q ss_pred             cCccccceecccCccceeccccccccccccceeec-----CCCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-----IDARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPR  228 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-----~~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~  228 (282)
                      ++|+..+.||+|+||.||+             |..     ..+..+|+|.+....... .. |.+|+.++..++|+||++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~-------------~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~   71 (283)
T cd05090           5 SAVRFMEELGECAFGKIYK-------------GHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVC   71 (283)
T ss_pred             hhceeeeeccccCCcceEE-------------EEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeee
Confidence            3466678999999999999             653     245789999997533322 24 999999999999999999


Q ss_pred             eccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          229 SYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       229 l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ++ |++..+...+ ++|||+++|+|.+++..
T Consensus        72 ~~-~~~~~~~~~~-lv~e~~~~~~L~~~l~~  100 (283)
T cd05090          72 LL-GVVTQEQPVC-MLFEYLNQGDLHEFLIM  100 (283)
T ss_pred             EE-EEEecCCceE-EEEEcCCCCcHHHHHHh
Confidence            99 9988888888 99999999999999853

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.04  E-value=3.9e-10  Score=99.69  Aligned_cols=98  Identities=15%  Similarity=0.108  Sum_probs=77.3

Q ss_pred             ccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCC---CchhH-HHHHHHHhhhCCCCccceeccc
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGS---VTGIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      |...+.||+|+||.||+             +.. .++..||+|.+....   ..... +.+|+.++..++|+|++++. +
T Consensus         2 f~~~~~lg~G~~g~V~~-------------~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~-~   67 (285)
T cd05631           2 FRHYRVLGKGGFGEVCA-------------CQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLA-Y   67 (285)
T ss_pred             ceEEEEEecCCCEEEEE-------------EEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEE-E
Confidence            56668999999999999             765 468999999986432   22334 88999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      .+...+..+ +||||+++|+|.+++..... ..+++...
T Consensus        68 ~~~~~~~~~-lv~e~~~~g~L~~~~~~~~~-~~~~~~~~  104 (285)
T cd05631          68 AYETKDALC-LVLTIMNGGDLKFHIYNMGN-PGFDEQRA  104 (285)
T ss_pred             EEccCCeEE-EEEEecCCCcHHHHHHhhCC-CCCCHHHH
Confidence            988888888 99999999999988864321 23455443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.04  E-value=1.8e-10  Score=106.05  Aligned_cols=91  Identities=15%  Similarity=0.140  Sum_probs=76.2

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCC---CCchhH-HHHHHHHhhhCCCCccce
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAG---SVTGIF-FARSVTEVAKIYARSRPR  228 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~---~~~~~~-f~~e~~~l~~l~H~nlv~  228 (282)
                      ..++|...+.||+|+||.||+             +... .+..+|+|.+...   ...... +.+|+.++..++|+||++
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~  107 (370)
T cd05596          41 KAEDFDVIKVIGRGAFGEVQL-------------VRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQ  107 (370)
T ss_pred             CHHHcEEEEEEeeCCCEEEEE-------------EEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcce
Confidence            456788889999999999999             7654 5789999998642   122334 889999999999999999


Q ss_pred             eccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          229 SYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       229 l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ++ +++..++..+ +||||+++|+|.+++..
T Consensus       108 ~~-~~~~~~~~~~-lv~Ey~~gg~L~~~l~~  136 (370)
T cd05596         108 LH-YAFQDDKYLY-MVMEYMPGGDLVNLMSN  136 (370)
T ss_pred             EE-EEEecCCEEE-EEEcCCCCCcHHHHHHh
Confidence            99 9888888888 99999999999998864

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.04  E-value=4.9e-10  Score=102.29  Aligned_cols=85  Identities=15%  Similarity=0.226  Sum_probs=70.8

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCccceeccceE
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRSYPSVV  234 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l~~g~~  234 (282)
                      |...++||+|+||.||+             +... ++..||+|.+....... .+ +.+|+.++..++|+||++++ +++
T Consensus        76 ~~~~~~lg~G~~g~V~~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~-~~~  141 (353)
T PLN00034         76 LERVNRIGSGAGGTVYK-------------VIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCH-DMF  141 (353)
T ss_pred             HhhhhhccCCCCeEEEE-------------EEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceee-eEe
Confidence            34458899999999999             7654 58899999986543332 23 99999999999999999999 999


Q ss_pred             eeCCeEEEEEEecCCCCCccccc
Q 043820          235 IRPGYKVGLILELKPDPDPNPDR  257 (282)
Q Consensus       235 ~~~~~~~~lv~Ey~~~GsL~~~l  257 (282)
                      ...+..+ +||||+++|+|....
T Consensus       142 ~~~~~~~-lv~e~~~~~~L~~~~  163 (353)
T PLN00034        142 DHNGEIQ-VLLEFMDGGSLEGTH  163 (353)
T ss_pred             ccCCeEE-EEEecCCCCcccccc
Confidence            8888888 999999999997653

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.04  E-value=2.8e-10  Score=105.60  Aligned_cols=100  Identities=17%  Similarity=0.235  Sum_probs=79.1

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch---hH-HHHHHHHhhhCCCCccce
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG---IF-FARSVTEVAKIYARSRPR  228 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~---~~-f~~e~~~l~~l~H~nlv~  228 (282)
                      ..++|.....||+|+||.||.             +.-. .|..+|+|+|++.....   .+ ...|-.+|....+++||+
T Consensus       139 ~~~DFe~Lk~IgkGAfGeVrL-------------arKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVK  205 (550)
T KOG0605|consen  139 SLDDFELLKVIGKGAFGEVRL-------------ARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVK  205 (550)
T ss_pred             CcccchhheeeccccceeEEE-------------EEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEE
Confidence            457799999999999999999             7655 48899999998754332   23 899999999999999999


Q ss_pred             eccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCC
Q 043820          229 SYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYP  269 (282)
Q Consensus       229 l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~  269 (282)
                      |+ =...+.+..| |||||+||||+..+|.... .-..+|.
T Consensus       206 Ly-YsFQD~~~LY-LiMEylPGGD~mTLL~~~~-~L~e~~a  243 (550)
T KOG0605|consen  206 LY-YSFQDKEYLY-LIMEYLPGGDMMTLLMRKD-TLTEDWA  243 (550)
T ss_pred             EE-EEecCCCeeE-EEEEecCCccHHHHHHhcC-cCchHHH
Confidence            99 4555566666 9999999999999886543 2234554

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.03  E-value=3.6e-10  Score=98.56  Aligned_cols=100  Identities=19%  Similarity=0.232  Sum_probs=77.8

Q ss_pred             cCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhHHHHHHHHhhhCCCCccceeccceEe
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRPRSYPSVVI  235 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~nlv~l~~g~~~  235 (282)
                      ..|...++||+|+||.||+             +...+...||+|.+.........|.+|+.++..++|+||+++. +...
T Consensus         6 ~~~~~~~~lg~g~~~~v~~-------------~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~-~~~~   71 (262)
T cd05071           6 ESLRLEVKLGQGCFGEVWM-------------GTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY-AVVS   71 (262)
T ss_pred             HHeeEeeecCCCCCCcEEE-------------EEecCCceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEE-EEEC
Confidence            4577779999999999999             8766667899999975333222399999999999999999999 8764


Q ss_pred             eCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          236 RPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       236 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                       ....+ ++|||+++|+|.+++.... ...++|..+.
T Consensus        72 -~~~~~-lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~  105 (262)
T cd05071          72 -EEPIY-IVTEYMSKGSLLDFLKGEM-GKYLRLPQLV  105 (262)
T ss_pred             -CCCcE-EEEEcCCCCcHHHHHhhcc-ccCCCHHHHH
Confidence             44556 9999999999999997532 2245665543

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.03  E-value=2.6e-10  Score=99.35  Aligned_cols=100  Identities=16%  Similarity=0.164  Sum_probs=80.6

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      .+|...+.||+|+||.||+             +... .+..||+|.+.... .... +.+|+.++..++|+||++++ +.
T Consensus         6 ~~~~~~~~ig~g~~~~v~~-------------~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~-~~   70 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYE-------------GVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLL-GV   70 (263)
T ss_pred             HHeEEeeecCCcccceEEE-------------EEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheE-EE
Confidence            3466778999999999999             7654 47899999986432 2334 99999999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      +...+..+ ++|||+++|+|.+++.... ...++|..++
T Consensus        71 ~~~~~~~~-lv~e~~~~~~L~~~~~~~~-~~~l~~~~~~  107 (263)
T cd05052          71 CTREPPFY-IITEFMTYGNLLDYLRECN-RQEVNAVVLL  107 (263)
T ss_pred             EcCCCCcE-EEEEeCCCCcHHHHHHhCC-CCCCCHHHHH
Confidence            98888888 9999999999999986543 2346666543

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.03  E-value=3e-10  Score=99.40  Aligned_cols=108  Identities=19%  Similarity=0.159  Sum_probs=80.3

Q ss_pred             cCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCccceeccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      .+|+....||+|+||.||++.....       ........+++|.+...... ... |.+|+.++.+++|+||++++ +.
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~-------~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~-~~   76 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGI-------EEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLL-GL   76 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccC-------CcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeE-EE
Confidence            4677778999999999999322111       01113467999988654433 234 99999999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccCCCCC------cCCCCCccc
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLHSSRV------RSLQYPDPA  272 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~------~~l~W~~R~  272 (282)
                      +......+ +||||+++|+|.+++......      ..++|..+.
T Consensus        77 ~~~~~~~~-lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~  120 (275)
T cd05046          77 CREAEPHY-MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKV  120 (275)
T ss_pred             ECCCCcce-EEEEecCCCcHHHHHHhcccccccccccCCCHHHHH
Confidence            88877778 999999999999999754321      146676654

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.03  E-value=4e-10  Score=99.45  Aligned_cols=97  Identities=20%  Similarity=0.208  Sum_probs=75.9

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCccceecc
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      ..++|+..+.||+|+||.||++...+.       ....++..||+|.+...... ... |.+|+.++..++|+|++++. 
T Consensus         3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~-------~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~-   74 (288)
T cd05050           3 PRNNIEYVRDIGQGAFGRVFQARAPGL-------LPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLL-   74 (288)
T ss_pred             ChHhceecccccccccccEEEEEEccc-------CCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEE-
Confidence            345688889999999999999322110       00114678999998754332 234 99999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +++..+...+ +++||+++|+|.+++..
T Consensus        75 ~~~~~~~~~~-lv~e~~~~~~L~~~l~~  101 (288)
T cd05050          75 GVCAVGKPMC-LLFEYMAYGDLNEFLRH  101 (288)
T ss_pred             EEEcCCCccE-EEEecCCCCCHHHHHHH
Confidence            9998888888 99999999999999974

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.03  E-value=5e-10  Score=97.75  Aligned_cols=84  Identities=19%  Similarity=0.202  Sum_probs=69.1

Q ss_pred             eecccCccceeccccccccccccceeecCC---CcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCccceeccceEeeC
Q 043820          163 KLGEGGFGPVYKVVAAGICFAGTITGARID---ARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRSYPSVVIRP  237 (282)
Q Consensus       163 ~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~---~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l~~g~~~~~  237 (282)
                      +||+|+||.||+             |...+   ...+++|.+....... .. |.+|+..+..++|+||++++ |.+...
T Consensus         2 ~lg~G~fg~v~~-------------~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~-~~~~~~   67 (269)
T cd05042           2 EIGNGWFGKVLL-------------GEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCL-GQCIES   67 (269)
T ss_pred             cCCccCCceEEE-------------EEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEE-EEECCC
Confidence            589999999999             65432   4578899876543333 33 89999999999999999999 999888


Q ss_pred             CeEEEEEEecCCCCCccccccCCC
Q 043820          238 GYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       238 ~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      ...+ +||||+++|+|.++|....
T Consensus        68 ~~~~-lv~e~~~~g~L~~~l~~~~   90 (269)
T cd05042          68 IPYL-LVLEFCPLGDLKNYLRSNR   90 (269)
T ss_pred             CceE-EEEEeCCCCcHHHHHHhcc
Confidence            8888 9999999999999987543

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.03  E-value=2.9e-10  Score=104.77  Aligned_cols=93  Identities=14%  Similarity=0.146  Sum_probs=76.9

Q ss_pred             HHhccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhCCCCcc
Q 043820          152 ANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKIYARSR  226 (282)
Q Consensus       152 ~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~H~nl  226 (282)
                      ....++|...+.||+|+||.||+             +... .+..+|+|.+....   ..... +.+|+.++..++||||
T Consensus        39 ~~~~~~y~~~~~lG~G~fg~Vy~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~i  105 (370)
T cd05621          39 QMKAEDYDVVKVIGRGAFGEVQL-------------VRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWV  105 (370)
T ss_pred             CCCHHHCeEEEEEEecCCeEEEE-------------EEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCE
Confidence            34456788889999999999999             7654 47899999986421   22234 8899999999999999


Q ss_pred             ceeccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          227 PRSYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       227 v~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ++++ +.+..+...+ +||||+++|+|.+++..
T Consensus       106 v~~~-~~~~~~~~~~-lv~Ey~~gg~L~~~l~~  136 (370)
T cd05621         106 VQLF-CAFQDDKYLY-MVMEYMPGGDLVNLMSN  136 (370)
T ss_pred             eeEE-EEEEcCCEEE-EEEcCCCCCcHHHHHHh
Confidence            9999 9988888888 99999999999998854

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.03  E-value=1.3e-10  Score=104.86  Aligned_cols=88  Identities=16%  Similarity=0.209  Sum_probs=74.4

Q ss_pred             ccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCchhH----HHHHHHHhhhCCCCccceeccc
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVTGIF----FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~~~~----f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      |.+.+.||.|.||+|-+             +.- ..|..||||.+++..-.++.    ..+|+++|+.|+||||+.++ .
T Consensus        55 yE~~etLGkGTYGKVk~-------------A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~Iy-E  120 (668)
T KOG0611|consen   55 YEITETLGKGTYGKVKL-------------AYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIY-E  120 (668)
T ss_pred             HHHHHHhcCCcccceee-------------hhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehh-h
Confidence            55558999999999998             654 46899999999875444333    88999999999999999999 8


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ++...+... |||||..+|+|.+||...
T Consensus       121 VFENkdKIv-ivMEYaS~GeLYDYiSer  147 (668)
T KOG0611|consen  121 VFENKDKIV-IVMEYASGGELYDYISER  147 (668)
T ss_pred             hhcCCceEE-EEEEecCCccHHHHHHHh
Confidence            887777777 999999999999999653

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.02  E-value=3.7e-10  Score=98.60  Aligned_cols=98  Identities=15%  Similarity=0.138  Sum_probs=77.3

Q ss_pred             ccccceecccCccceeccccccccccccceeecCC----CcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCccceecc
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARID----ARVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~----~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      +...+.||+|+||.||+             |....    +..||+|.+...... ... |..|+.++..++|+||+++. 
T Consensus         6 ~~~~~~lg~g~~g~vy~-------------~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~-   71 (269)
T cd05065           6 VKIEEVIGAGEFGEVCR-------------GRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLE-   71 (269)
T ss_pred             eEEEeEecCCCCCeEEE-------------EEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEE-
Confidence            55668999999999999             76542    246999998754322 233 99999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      +.+..+...+ ++|||+++|+|.+++....  ..++|.+++
T Consensus        72 ~~~~~~~~~~-lv~e~~~~~~L~~~l~~~~--~~~~~~~~~  109 (269)
T cd05065          72 GVVTKSRPVM-IITEFMENGALDSFLRQND--GQFTVIQLV  109 (269)
T ss_pred             EEECCCCceE-EEEecCCCCcHHHHHhhCC--CCCCHHHHH
Confidence            9988888888 9999999999999986543  245665443

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.02  E-value=3.4e-10  Score=101.53  Aligned_cols=90  Identities=21%  Similarity=0.182  Sum_probs=72.2

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CC----cEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DA----RVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPR  228 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~----~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~  228 (282)
                      .+|+..+.||+|+||.||+             |... ++    ..||+|.+...... ..+ |.+|+.++..++|+||++
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~-------------~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~   73 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYK-------------GLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR   73 (316)
T ss_pred             hhceeeeeeecCCCceEEE-------------EEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCe
Confidence            3577789999999999999             7643 23    34899998754332 334 999999999999999999


Q ss_pred             eccceEeeCCeEEEEEEecCCCCCccccccCCC
Q 043820          229 SYPSVVIRPGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       229 l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      ++ |+|... ... +++||+++|+|.+++....
T Consensus        74 ~~-g~~~~~-~~~-~v~e~~~~g~l~~~l~~~~  103 (316)
T cd05108          74 LL-GICLTS-TVQ-LITQLMPFGCLLDYVREHK  103 (316)
T ss_pred             EE-EEEcCC-Cce-eeeecCCCCCHHHHHHhcc
Confidence            99 998764 456 8999999999999987543

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.02  E-value=3e-10  Score=97.30  Aligned_cols=88  Identities=23%  Similarity=0.291  Sum_probs=73.9

Q ss_pred             ccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCC-chhH--HHHHHHHhhhCCCCccceeccce
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSV-TGIF--FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~-~~~~--f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      |...+++|+|.||.||+             +.- ..|+.||+|++..... .+..  -++|++.|+.++|+||+.|+ .+
T Consensus         4 Y~~~~~lGEG~~gvVyk-------------a~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~Li-D~   69 (318)
T KOG0659|consen    4 YEKLEKLGEGTYGVVYK-------------ARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELI-DV   69 (318)
T ss_pred             hhhhhhhcCcceEEEEE-------------EEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhh-hh
Confidence            44458899999999999             763 3689999999976533 3333  89999999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccCCC
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      .......- ||+|||+. +|+..|.++.
T Consensus        70 F~~~~~l~-lVfEfm~t-dLe~vIkd~~   95 (318)
T KOG0659|consen   70 FPHKSNLS-LVFEFMPT-DLEVVIKDKN   95 (318)
T ss_pred             ccCCCceE-EEEEeccc-cHHHHhcccc
Confidence            88888888 99999996 8999988765

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.01  E-value=5.4e-10  Score=105.12  Aligned_cols=92  Identities=17%  Similarity=0.213  Sum_probs=79.4

Q ss_pred             HhccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchh--H-HHHHHHHhhhCCCCccce
Q 043820          153 NATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGI--F-FARSVTEVAKIYARSRPR  228 (282)
Q Consensus       153 ~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~--~-f~~e~~~l~~l~H~nlv~  228 (282)
                      ....+|.+...||+|.|+.|..             +... .+..||+|.+++......  . +.+|+.+|..+.|||||+
T Consensus        53 ~~vg~y~i~~tig~g~f~~V~L-------------a~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvk  119 (596)
T KOG0586|consen   53 NSVGLYVIIKTIGKGNFAKVKL-------------ARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVK  119 (596)
T ss_pred             ccccceeeeeeeccceeEEEEe-------------eEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceee
Confidence            4456778889999999999999             6644 589999999987554433  3 899999999999999999


Q ss_pred             eccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          229 SYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       229 l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      |+ ++.......+ +||||..+|.+.+||..
T Consensus       120 l~-~v~~t~~~ly-lV~eya~~ge~~~yl~~  148 (596)
T KOG0586|consen  120 LF-SVIETEATLY-LVMEYASGGELFDYLVK  148 (596)
T ss_pred             ee-eeeeecceeE-EEEEeccCchhHHHHHh
Confidence            99 9988889988 99999999999999964

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.01  E-value=1.6e-10  Score=107.92  Aligned_cols=90  Identities=18%  Similarity=0.213  Sum_probs=76.2

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchh--H-HHHHHHHhhhCCCCccceecc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGI--F-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~--~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      ++|...+.||+|+||.|||             |..+ +.+.||+|.+.+......  + ..+|++++++++|||||.++ 
T Consensus         2 e~yhv~e~iG~Gsfg~VYK-------------grrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~-   67 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYK-------------GRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEML-   67 (808)
T ss_pred             cchhHHHHhcCCccceeee-------------cccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHH-
Confidence            4566678999999999999             7755 468999999976544433  3 99999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccCCC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      ..+....+.+ +|.||+.+ +|..+|.+..
T Consensus        68 esfEt~~~~~-vVte~a~g-~L~~il~~d~   95 (808)
T KOG0597|consen   68 ESFETSAHLW-VVTEYAVG-DLFTILEQDG   95 (808)
T ss_pred             HhhcccceEE-EEehhhhh-hHHHHHHhcc
Confidence            8888888888 99999998 9999997644

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.01  E-value=6.4e-10  Score=98.33  Aligned_cols=93  Identities=18%  Similarity=0.233  Sum_probs=71.7

Q ss_pred             ccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCccceeccceEe
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRSYPSVVI  235 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l~~g~~~  235 (282)
                      |...+.||+|+||.||++.....       ........+++|.+....... .. +.+|+.++..++|+||++++ +.+.
T Consensus         2 ~~~~~~lg~g~~g~vy~~~~~~~-------~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~-~~~~   73 (290)
T cd05045           2 LVLGKTLGEGEFGKVVKATAFRL-------KGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLY-GACS   73 (290)
T ss_pred             ccccccccCcCCcceEEEEEecC-------CCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEE-EEEe
Confidence            56668999999999999321111       001123578999886544332 23 99999999999999999999 9998


Q ss_pred             eCCeEEEEEEecCCCCCccccccC
Q 043820          236 RPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       236 ~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ..+..+ +++||+++|+|.++|..
T Consensus        74 ~~~~~~-lv~e~~~~~~L~~~l~~   96 (290)
T cd05045          74 QDGPLL-LIVEYAKYGSLRSFLRE   96 (290)
T ss_pred             cCCCcE-EEEEecCCCCHHHHHHh
Confidence            888888 99999999999999864

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.01  E-value=3.5e-10  Score=99.66  Aligned_cols=99  Identities=12%  Similarity=0.097  Sum_probs=78.5

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCccceeccce
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      +|+..+.||+|+||.||+             +... .+..+|+|.+....... .. +.+|+.++.+++|+||++++ +.
T Consensus         2 ~~~~~~~ig~g~~g~v~~-------------~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~-~~   67 (286)
T cd06622           2 EIEVLDELGKGNYGSVYK-------------VLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFY-GA   67 (286)
T ss_pred             hhhhhhhhcccCCeEEEE-------------EEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhh-hh
Confidence            456668999999999999             7654 58899999886432222 23 99999999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCc
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPD  270 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~  270 (282)
                      +...+..+ +||||+++++|.+++........++|..
T Consensus        68 ~~~~~~~~-lv~e~~~~~~l~~~~~~~~~~~~~~~~~  103 (286)
T cd06622          68 FFIEGAVY-MCMEYMDAGSLDKLYAGGVATEGIPEDV  103 (286)
T ss_pred             eecCCeEE-EEEeecCCCCHHHHHHhccccCCCCHHH
Confidence            88888888 9999999999999886542222355543

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.01  E-value=4.7e-10  Score=98.74  Aligned_cols=99  Identities=14%  Similarity=0.145  Sum_probs=79.2

Q ss_pred             ccCHHHHHHhccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhHHHHHHHHhhhC-C
Q 043820          145 LFELATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIFFARSVTEVAKI-Y  222 (282)
Q Consensus       145 ~~~~~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l-~  222 (282)
                      .+.++.+..++++|+....||+|+||.||+             +... .+..+|+|.+.........+.+|+.++..+ +
T Consensus         7 ~~~~~~~~~~~~~~~~~~~lg~g~~~~vy~-------------~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~   73 (286)
T cd06638           7 TIIFDSFPDPSDTWEIIETIGKGTYGKVFK-------------VLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSD   73 (286)
T ss_pred             eEEeecCCCcccceeeeeeeccCCCcEEEE-------------EEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhc
Confidence            355677778899999999999999999999             7654 578999998764322222288999999999 7


Q ss_pred             CCccceeccceEee-----CCeEEEEEEecCCCCCcccccc
Q 043820          223 ARSRPRSYPSVVIR-----PGYKVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       223 H~nlv~l~~g~~~~-----~~~~~~lv~Ey~~~GsL~~~l~  258 (282)
                      |+|+++++ +++..     ++..+ +||||+++|+|.+++.
T Consensus        74 h~~i~~~~-~~~~~~~~~~~~~~~-lv~e~~~~~~L~~~l~  112 (286)
T cd06638          74 HPNVVKFY-GMYYKKDVKNGDQLW-LVLELCNGGSVTDLVK  112 (286)
T ss_pred             CCCeeeee-eeeeecccCCCCeEE-EEEeecCCCCHHHHHH
Confidence            99999999 98742     33456 9999999999998875

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.01  E-value=5.3e-10  Score=101.23  Aligned_cols=89  Identities=17%  Similarity=0.083  Sum_probs=74.3

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhCCCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ++|...+.||+|+||.||+             +... ++..||+|.+....   ....+ |.+|..++..++|+||+++.
T Consensus         1 ~~y~~~~~lG~G~~g~V~~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~   67 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAV-------------VKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLH   67 (331)
T ss_pred             CCceEEEEEEecCCeEEEE-------------EEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceE
Confidence            3577779999999999999             7654 57899999986421   12233 88999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                       +++.+++..+ +||||+++|+|.+++..
T Consensus        68 -~~~~~~~~~~-lv~e~~~g~~L~~~l~~   94 (331)
T cd05597          68 -YAFQDENNLY-LVMDYYVGGDLLTLLSK   94 (331)
T ss_pred             -EEEecCCeEE-EEEecCCCCcHHHHHHH
Confidence             9988888888 99999999999999854

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.01  E-value=5.3e-10  Score=99.18  Aligned_cols=102  Identities=21%  Similarity=0.231  Sum_probs=74.3

Q ss_pred             cCccccceecccCccceeccccccccc-cccceee-cCCCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCccceecc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICF-AGTITGA-RIDARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~-~~~~~g~-~~~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      +.|...+.||+|+||.||.+...+... .+...-. ......||+|.+....... .. |.+|+.++.+++|+|+++++ 
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~-   83 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL-   83 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE-
Confidence            456777999999999999844332200 0000000 0112458999987543332 33 99999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +++...+..+ +||||+++++|.+++..
T Consensus        84 ~~~~~~~~~~-lv~e~~~~~~L~~~l~~  110 (295)
T cd05097          84 GVCVSDDPLC-MITEYMENGDLNQFLSQ  110 (295)
T ss_pred             EEEcCCCccE-EEEecCCCCcHHHHHHh
Confidence            9998888888 99999999999999864

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.01  E-value=5e-10  Score=98.19  Aligned_cols=90  Identities=21%  Similarity=0.312  Sum_probs=75.2

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC------CCcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCccc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI------DARVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRP  227 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~------~~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv  227 (282)
                      ++|...+.||+|+||.||+             +...      .+..||+|.+...... ..+ |.+|+.++..++|+|++
T Consensus         5 ~~~~~~~~lg~g~~~~v~~-------------~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~   71 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFL-------------GECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIV   71 (280)
T ss_pred             HHhhHHhhccccCCceEee-------------eeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCch
Confidence            3466668999999999999             6542      2478999998765444 334 99999999999999999


Q ss_pred             eeccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          228 RSYPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       228 ~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ++. +.+......+ ++|||+++|+|.++|...
T Consensus        72 ~~~-~~~~~~~~~~-lv~e~~~~~~L~~~i~~~  102 (280)
T cd05049          72 KFY-GVCTEGDPPI-MVFEYMEHGDLNKFLRSH  102 (280)
T ss_pred             hee-eEEecCCCeE-EEEecCCCCCHHHHHHhc
Confidence            999 9999888888 999999999999999653

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.01  E-value=3.9e-10  Score=99.08  Aligned_cols=91  Identities=20%  Similarity=0.251  Sum_probs=77.7

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceecc
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      +.++|...+.||+|+||.||+             +... ++..+|+|.+........+ |.+|+.++.+++|+|+++++ 
T Consensus         3 ~~~~~~i~~~l~~g~~~~v~~-------------~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~-   68 (280)
T cd06611           3 PNDIWEIIGELGDGAFGKVYK-------------AQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLY-   68 (280)
T ss_pred             chhHHHHHHHhcCCCCceEEE-------------EEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEE-
Confidence            345677779999999999999             7654 5789999998755444445 99999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +.+..+...+ +||||+++|+|.+++..
T Consensus        69 ~~~~~~~~~~-lv~e~~~~~~L~~~~~~   95 (280)
T cd06611          69 EAYFYENKLW-ILIEFCDGGALDSIMLE   95 (280)
T ss_pred             EEEecCCeEE-EEeeccCCCcHHHHHHH
Confidence            9998888888 99999999999998864

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.01  E-value=5.6e-10  Score=101.05  Aligned_cols=89  Identities=17%  Similarity=0.120  Sum_probs=74.4

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhCCCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ++|...+.||+|+||.||+             +... .+..||+|.+....   ..... +.+|..++..++|+||+++.
T Consensus         1 d~y~i~~~lG~G~fg~V~~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~   67 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAV-------------VKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLH   67 (331)
T ss_pred             CCceEEEEEeeCCCeEEEE-------------EEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEE
Confidence            3577789999999999999             7654 57889999986421   11223 88999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                       +++...+..+ +||||+++|+|.+++..
T Consensus        68 -~~~~~~~~~~-lv~Ey~~gg~L~~~l~~   94 (331)
T cd05624          68 -YAFQDENYLY-LVMDYYVGGDLLTLLSK   94 (331)
T ss_pred             -EEEEcCCEEE-EEEeCCCCCcHHHHHHH
Confidence             9988888888 99999999999999965

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.01  E-value=5.9e-10  Score=97.93  Aligned_cols=104  Identities=21%  Similarity=0.203  Sum_probs=81.6

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecC------CCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCc
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI------DARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARS  225 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~------~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~n  225 (282)
                      ++++|...+.||+|+||.||+             +...      .+..||+|.+....... .. |..|+.++..++|+|
T Consensus         4 ~~~~~~~~~~lg~g~~g~vy~-------------~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~   70 (277)
T cd05036           4 PRDSITLLRALGHGAFGEVYE-------------GLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQN   70 (277)
T ss_pred             CHHHcEeeeECCCCCCCcEEE-------------EEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCC
Confidence            456788889999999999999             6543      35688999887544333 33 999999999999999


Q ss_pred             cceeccceEeeCCeEEEEEEecCCCCCccccccCCCC----CcCCCCCccc
Q 043820          226 RPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSR----VRSLQYPDPA  272 (282)
Q Consensus       226 lv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~----~~~l~W~~R~  272 (282)
                      |++++ +++.+....+ ++|||+++|+|.+++.....    ...++|...+
T Consensus        71 i~~~~-~~~~~~~~~~-lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~  119 (277)
T cd05036          71 IVRLI-GVSFERLPRF-ILLELMAGGDLKSFLRENRPRPERPSSLTMKDLL  119 (277)
T ss_pred             EeeEE-EEEccCCCcE-EEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHH
Confidence            99999 9998888888 99999999999999865431    1245665543

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.00  E-value=5.9e-10  Score=98.25  Aligned_cols=89  Identities=16%  Similarity=0.158  Sum_probs=74.5

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCccceeccc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      ++|+..+.||+|+||.||+             +... ++..+|+|.+...... ..+ +.+|+.++..++|+||++++ +
T Consensus         5 ~~~~~~~~ig~g~~g~v~~-------------~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~-~   70 (284)
T cd06620           5 EDLETISDLGAGNGGSVSK-------------VKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFY-G   70 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEE-------------EEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEe-e
Confidence            3456668999999999999             6644 5789999987654332 234 99999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      .+...+..+ +||||+++|+|.+++..
T Consensus        71 ~~~~~~~~~-lv~e~~~~~~L~~~~~~   96 (284)
T cd06620          71 AFLNENNIC-MCMEFMDCGSLDRIYKK   96 (284)
T ss_pred             eEecCCEEE-EEEecCCCCCHHHHHHh
Confidence            999888888 99999999999988754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.00  E-value=4.3e-10  Score=103.63  Aligned_cols=97  Identities=13%  Similarity=0.145  Sum_probs=79.9

Q ss_pred             HHHHHHhccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhCC
Q 043820          148 LATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKIY  222 (282)
Q Consensus       148 ~~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~  222 (282)
                      +.++....++|...+.||+|+||.||+             +... .+..+|+|.+....   ..... +.+|+.++..++
T Consensus        35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~-------------~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~  101 (371)
T cd05622          35 IRDLRMKAEDYEVVKVIGRGAFGEVQL-------------VRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN  101 (371)
T ss_pred             HhhcCcchhhcEEEEEEeecCCeEEEE-------------EEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCC
Confidence            445556668899999999999999999             6654 57899999986421   22234 889999999999


Q ss_pred             CCccceeccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          223 ARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       223 H~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ||||++++ +.+..++..+ +||||+++|+|.+++..
T Consensus       102 hp~iv~~~-~~~~~~~~~~-lv~Ey~~gg~L~~~~~~  136 (371)
T cd05622         102 SPWVVQLF-YAFQDDRYLY-MVMEYMPGGDLVNLMSN  136 (371)
T ss_pred             CCCCCeEE-EEEEcCCEEE-EEEcCCCCCcHHHHHHh
Confidence            99999999 9988888888 99999999999998854

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.00  E-value=4e-10  Score=97.92  Aligned_cols=100  Identities=20%  Similarity=0.255  Sum_probs=78.4

Q ss_pred             cCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhHHHHHHHHhhhCCCCccceeccceEe
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRPRSYPSVVI  235 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~nlv~l~~g~~~  235 (282)
                      ++|...+.||+|+||.||+             +...++..+|+|.+.........|.+|+.++.+++|+|+++++ +++.
T Consensus         6 ~~~~~~~~ig~g~~~~v~~-------------~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~-~~~~   71 (260)
T cd05070           6 ESLQLIKKLGNGQFGEVWM-------------GTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLY-AVVS   71 (260)
T ss_pred             HHhhhhheeccccCceEEE-------------EEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEE-eEEC
Confidence            3566678999999999999             8777778899999875433322399999999999999999999 8874


Q ss_pred             eCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          236 RPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       236 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                       ....+ ++|||+++|+|.+++.... ...++|.++.
T Consensus        72 -~~~~~-lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~  105 (260)
T cd05070          72 -EEPIY-IVTEYMSKGSLLDFLKDGE-GRALKLPNLV  105 (260)
T ss_pred             -CCCcE-EEEEecCCCcHHHHHHhcC-CCCCCHHHHH
Confidence             45566 9999999999999997543 2235665443

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.00  E-value=1.2e-11  Score=113.09  Aligned_cols=110  Identities=18%  Similarity=0.155  Sum_probs=85.7

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH--HHHHHHHhhhCC-CCccceecc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF--FARSVTEVAKIY-ARSRPRSYP  231 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~--f~~e~~~l~~l~-H~nlv~l~~  231 (282)
                      +.|...++||.|.||.||+             +... .+..||||+++.....-++  =++|+..|.+++ |+||++|. 
T Consensus        10 ~RY~~i~klGDGTfGsV~l-------------a~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~-   75 (538)
T KOG0661|consen   10 DRYTVIRKLGDGTFGSVYL-------------AKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLK-   75 (538)
T ss_pred             HHHHHHHHhcCCcceeEEE-------------eeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhH-
Confidence            3456668999999999999             6643 5888999999865544444  789999999998 99999999 


Q ss_pred             ceEeeCC-eEEEEEEecCCCCCccccccCCCC----CcCCCCC-ccccceeccCCC
Q 043820          232 SVVIRPG-YKVGLILELKPDPDPNPDRLHSSR----VRSLQYP-DPAQGFAIPSVN  281 (282)
Q Consensus       232 g~~~~~~-~~~~lv~Ey~~~GsL~~~l~~~~~----~~~l~W~-~R~~~~~~~~~~  281 (282)
                      .+..+.+ ..+ +|||||.. +|.+.+.+..+    ...-+|. +=++||+-+|.|
T Consensus        76 Evi~d~~~~L~-fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~  129 (538)
T KOG0661|consen   76 EVIRDNDRILY-FVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKH  129 (538)
T ss_pred             HHhhccCceEe-eeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhc
Confidence            9999988 556 99999985 89998877642    1112343 456788888765

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.00  E-value=7.2e-10  Score=95.87  Aligned_cols=89  Identities=18%  Similarity=0.254  Sum_probs=75.2

Q ss_pred             CccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhHHHHHHHHhhhCCCCccceeccceEee
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRPRSYPSVVIR  236 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~nlv~l~~g~~~~  236 (282)
                      +|+..+.||+|+||.||+             +...++..+|+|.+.........|.+|+.++..++|+|+++++ +.+..
T Consensus         5 ~~~~~~~ig~g~~g~v~~-------------~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~-~~~~~   70 (256)
T cd05112           5 ELTLVQEIGSGQFGLVWL-------------GYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLY-GVCTE   70 (256)
T ss_pred             HeEEEeeecCcccceEEE-------------EEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEE-EEEcc
Confidence            456668999999999999             8766678899999875433333399999999999999999999 99888


Q ss_pred             CCeEEEEEEecCCCCCccccccCC
Q 043820          237 PGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       237 ~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ....+ ++|||+++|+|.+++...
T Consensus        71 ~~~~~-~v~e~~~~~~L~~~~~~~   93 (256)
T cd05112          71 RSPIC-LVFEFMEHGCLSDYLRAQ   93 (256)
T ss_pred             CCceE-EEEEcCCCCcHHHHHHhC
Confidence            88877 999999999999998654

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.00  E-value=6.3e-10  Score=101.86  Aligned_cols=90  Identities=16%  Similarity=0.166  Sum_probs=74.8

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhCCCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ++|...+.||+|+||.||+             +... .+..||+|.+....   ..... +.+|+.++..++|+||++++
T Consensus         1 ~~f~~~~~lG~G~~g~V~~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~   67 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRL-------------VQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMF   67 (360)
T ss_pred             CCceEEEEEeeCCCEEEEE-------------EEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEE
Confidence            3577779999999999999             7654 57899999986422   12223 88999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                       +.+...+..+ +||||+++|+|.+++...
T Consensus        68 -~~~~~~~~~~-lv~E~~~gg~L~~~l~~~   95 (360)
T cd05627          68 -YSFQDKRNLY-LIMEFLPGGDMMTLLMKK   95 (360)
T ss_pred             -EEEEcCCEEE-EEEeCCCCccHHHHHHhc
Confidence             9888888888 999999999999998653

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.99  E-value=6.3e-10  Score=99.45  Aligned_cols=91  Identities=16%  Similarity=0.224  Sum_probs=73.3

Q ss_pred             CccccceecccCccceeccccccccccccceeecCC-CcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccceE
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARID-ARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSVV  234 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~-~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~~  234 (282)
                      ++...+.||+|+||.||.             +...+ |...|||.+........+ +.+|+.+|.+++|||||+.+ |..
T Consensus        18 ~~~~~~~lG~Gs~G~V~l-------------~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~-G~~   83 (313)
T KOG0198|consen   18 NWSKGKLLGRGSFGSVYL-------------ATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYY-GSS   83 (313)
T ss_pred             hhhhhccccCccceEEEE-------------EEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeC-Ccc
Confidence            455668999999999999             77654 889999998754333345 89999999999999999999 974


Q ss_pred             eeCCe-EEEEEEecCCCCCccccccCCC
Q 043820          235 IRPGY-KVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       235 ~~~~~-~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      ..... .++++|||+++|+|.+++....
T Consensus        84 ~~~~~~~~~i~mEy~~~GsL~~~~~~~g  111 (313)
T KOG0198|consen   84 SSRENDEYNIFMEYAPGGSLSDLIKRYG  111 (313)
T ss_pred             ccccCeeeEeeeeccCCCcHHHHHHHcC
Confidence            44443 4449999999999999997644

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=98.99  E-value=3.5e-10  Score=100.67  Aligned_cols=92  Identities=15%  Similarity=0.201  Sum_probs=73.5

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc---hhH-HHHHHHHhhhCCCCcccee
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT---GIF-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~---~~~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      .++|...+.||+|+||+||.             ..-. .++.+|+|.+++..--   ..+ ..+|..+|.+++||.||+|
T Consensus        24 ~~dF~~lkviGkG~fGkV~~-------------Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l   90 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQ-------------VRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKL   90 (357)
T ss_pred             hhheeeeeeeeccCCceEEE-------------EEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeee
Confidence            46788889999999999999             5544 4789999999764322   233 8999999999999999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccCCC
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      .  +.....+.+|||+||+.||+|..+|..+.
T Consensus        91 ~--ysFQt~~kLylVld~~~GGeLf~hL~~eg  120 (357)
T KOG0598|consen   91 I--YSFQTEEKLYLVLDYLNGGELFYHLQREG  120 (357)
T ss_pred             E--EecccCCeEEEEEeccCCccHHHHHHhcC
Confidence            8  44444444449999999999999997543

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=98.99  E-value=6.8e-10  Score=97.88  Aligned_cols=99  Identities=16%  Similarity=0.159  Sum_probs=77.0

Q ss_pred             CccccceecccCccceeccccccccccccceeec-----CCCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCcccee
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-----IDARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-----~~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      .|...+.||+|+||.||.             +..     ..+..||+|.+....... .. |.+|+.++..++|+|++++
T Consensus         5 ~~~~~~~lg~g~~g~v~~-------------~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~   71 (284)
T cd05079           5 FLKRIRDLGEGHFGKVEL-------------CRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY   71 (284)
T ss_pred             hhhhceecCCCCceeEEE-------------EEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeee
Confidence            356668999999999998             542     246789999987543332 33 9999999999999999999


Q ss_pred             ccceEeeC--CeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          230 YPSVVIRP--GYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       230 ~~g~~~~~--~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      . +++...  ...+ ++|||+++|+|.+++....  ..++|..++
T Consensus        72 ~-~~~~~~~~~~~~-lv~e~~~g~~L~~~l~~~~--~~~~~~~~~  112 (284)
T cd05079          72 K-GICTEDGGNGIK-LIMEFLPSGSLKEYLPRNK--NKINLKQQL  112 (284)
T ss_pred             e-eEEecCCCCceE-EEEEccCCCCHHHHHHhcc--CCCCHHHHH
Confidence            9 988765  4456 9999999999999986432  246776554

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=98.99  E-value=7.8e-10  Score=97.78  Aligned_cols=89  Identities=21%  Similarity=0.282  Sum_probs=74.8

Q ss_pred             cCccccceecccCccceeccccccccccccceeec------CCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR------IDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPR  228 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~------~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~  228 (282)
                      ++|...+.||+|+||.||+             +..      .++..+|+|.+......... +.+|+.++.+++|+||++
T Consensus         5 ~~~~~~~~lg~G~~~~v~~-------------~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   71 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFL-------------AECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVK   71 (288)
T ss_pred             HHeeeccccCCcCCeeEEe-------------eEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            4577779999999999999             542      23467899998765444455 999999999999999999


Q ss_pred             eccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          229 SYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       229 l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +. +++...+..+ ++|||+++|+|.++|..
T Consensus        72 ~~-~~~~~~~~~~-lv~e~~~~~~L~~~i~~  100 (288)
T cd05093          72 FY-GVCVEGDPLI-MVFEYMKHGDLNKFLRA  100 (288)
T ss_pred             EE-EEEecCCccE-EEEEcCCCCCHHHHHHH
Confidence            99 9998888888 99999999999999864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=98.99  E-value=1.5e-09  Score=94.40  Aligned_cols=87  Identities=14%  Similarity=0.205  Sum_probs=73.5

Q ss_pred             ccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCc------hhH-HHHHHHHhhhCCCCccceec
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVT------GIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~------~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      |...+.||+|+||.||+             +...++..+|+|.+......      ... +.+|+.++..++|+||+++.
T Consensus         2 ~~~~~~ig~g~~~~v~~-------------~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~   68 (265)
T cd06631           2 WTKGEVLGKGAYGTVYC-------------GLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYL   68 (265)
T ss_pred             ccccceEeccCCeEEEE-------------EEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEe
Confidence            45568999999999999             87667889999988643211      113 88999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                       +++.+.+..+ +++||+++|+|.+++..
T Consensus        69 -~~~~~~~~~~-lv~e~~~~~~L~~~l~~   95 (265)
T cd06631          69 -GTCLDDNTIS-IFMEFVPGGSISSILNR   95 (265)
T ss_pred             -eEeecCCeEE-EEEecCCCCcHHHHHHh
Confidence             9999888888 99999999999999864

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=98.98  E-value=7.5e-10  Score=99.96  Aligned_cols=90  Identities=14%  Similarity=0.165  Sum_probs=75.3

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC---chhH-HHHHHHHhhhCCCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV---TGIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~---~~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ++|...+.||+|+||.||+             +... ++..||+|.++....   ...+ +.+|+.++..++|+||+++.
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~   67 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQV-------------VREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQ   67 (330)
T ss_pred             CCceEEEEEEeccCEEEEE-------------EEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCccee
Confidence            3577789999999999999             6654 588999999875322   2233 88999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                       +.+...+..+ +||||+++|+|.+++...
T Consensus        68 -~~~~~~~~~~-lv~e~~~~~~L~~~l~~~   95 (330)
T cd05601          68 -YAFQDKDNLY-LVMEYQPGGDLLSLLNRY   95 (330)
T ss_pred             -eEEecCCeEE-EEECCCCCCCHHHHHHHh
Confidence             8888888888 999999999999998654

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=98.98  E-value=1.3e-09  Score=94.68  Aligned_cols=89  Identities=25%  Similarity=0.292  Sum_probs=75.5

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhCCCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ++|+..+.||+|+||.||+             +... ++..||+|.++...   ....+ +.+|+.++.+++|+|+++++
T Consensus         2 ~~y~~~~~lg~g~~~~v~~-------------~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~   68 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYK-------------AICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYL   68 (267)
T ss_pred             CceeeeeeeccCCceEEEE-------------EEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeee
Confidence            5677889999999999999             7765 68899999886321   22234 99999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                       +.+...+..+ ++|||+++|+|.+++..
T Consensus        69 -~~~~~~~~~~-lv~e~~~~~~L~~~l~~   95 (267)
T cd08224          69 -ASFIENNELN-IVLELADAGDLSRMIKH   95 (267)
T ss_pred             -eeeecCCeEE-EEEecCCCCCHHHHHHH
Confidence             9998888888 99999999999998854

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=98.98  E-value=5.3e-10  Score=98.85  Aligned_cols=100  Identities=17%  Similarity=0.230  Sum_probs=76.0

Q ss_pred             HHHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCch-hH-HHHHHHHhhhC-CCCccc
Q 043820          151 IANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTG-IF-FARSVTEVAKI-YARSRP  227 (282)
Q Consensus       151 l~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l-~H~nlv  227 (282)
                      +....++|+..+.||+|+||.||++...+.       ........+|+|.+....... .. +.+|+.++..+ +|+||+
T Consensus         7 ~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~-------~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~   79 (293)
T cd05053           7 WELPRDRLTLGKPLGEGAFGQVVKAEAVGL-------DNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNII   79 (293)
T ss_pred             cccCHhHeEEeeEecccccccEEEEEEecC-------CCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCee
Confidence            344556677789999999999999221111       001234689999987543322 23 89999999999 899999


Q ss_pred             eeccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          228 RSYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       228 ~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +++ +.+...+..+ ++|||+++|+|.+++..
T Consensus        80 ~~~-~~~~~~~~~~-li~e~~~~~~L~~~l~~  109 (293)
T cd05053          80 NLL-GVCTQEGPLY-VVVEYAAHGNLRDFLRA  109 (293)
T ss_pred             eEE-EEEcCCCCeE-EEEEeCCCCcHHHHHHh
Confidence            999 9998888888 99999999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=98.98  E-value=7.9e-10  Score=101.95  Aligned_cols=91  Identities=16%  Similarity=0.243  Sum_probs=77.4

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecCC-CcEEEEEEccCCCCc---hhH-HHHHHHHhhhCC-CCccce
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARID-ARVVAARIVFAGSVT---GIF-FARSVTEVAKIY-ARSRPR  228 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~-~~~vAvK~l~~~~~~---~~~-f~~e~~~l~~l~-H~nlv~  228 (282)
                      ...|...+.||+|.||.||+             +..+. |..+|+|.+......   ..+ +.+|+.+|.++. |||+|.
T Consensus        34 ~~~Y~l~~~lG~G~Fg~v~~-------------~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~  100 (382)
T KOG0032|consen   34 KEKYELGRELGRGQFGVVYL-------------CREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQ  100 (382)
T ss_pred             cccEEehhhhCCCCceEEEE-------------EEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEE
Confidence            34567779999999999999             76554 899999999764432   234 999999999998 999999


Q ss_pred             eccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          229 SYPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       229 l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +. +...+....+ +|||++.+|+|.+.|...
T Consensus       101 l~-~~~e~~~~~~-lvmEL~~GGeLfd~i~~~  130 (382)
T KOG0032|consen  101 LK-DAFEDPDSVY-LVMELCEGGELFDRIVKK  130 (382)
T ss_pred             EE-EEEEcCCeEE-EEEEecCCchHHHHHHHc
Confidence            99 9999888888 999999999999988653

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=98.98  E-value=8e-10  Score=99.71  Aligned_cols=84  Identities=12%  Similarity=0.037  Sum_probs=69.6

Q ss_pred             ceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC---chhH-HHHHHHHhhhCCCCccceeccceEee
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV---TGIF-FARSVTEVAKIYARSRPRSYPSVVIR  236 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~---~~~~-f~~e~~~l~~l~H~nlv~l~~g~~~~  236 (282)
                      +.||+|+||.||+             +... ++..||+|.+.....   .... +.+|+.++..++||||+++. +.+..
T Consensus         1 ~~lG~G~~g~Vy~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~-~~~~~   66 (323)
T cd05595           1 KLLGKGTFGKVIL-------------VREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK-YAFQT   66 (323)
T ss_pred             CeeeeCCCEEEEE-------------EEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCccee-eEEec
Confidence            3689999999999             6643 588999999865321   2223 88999999999999999999 99888


Q ss_pred             CCeEEEEEEecCCCCCccccccCC
Q 043820          237 PGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       237 ~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      .+..+ +||||+++|+|..++...
T Consensus        67 ~~~~~-lv~E~~~~~~L~~~l~~~   89 (323)
T cd05595          67 HDRLC-FVMEYANGGELFFHLSRE   89 (323)
T ss_pred             CCEEE-EEEeCCCCCcHHHHHHHc
Confidence            88888 999999999998888643

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=98.98  E-value=6.3e-10  Score=96.10  Aligned_cols=100  Identities=15%  Similarity=0.144  Sum_probs=79.7

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC--chhH-HHHHHHHhhhCCCCccceeccc
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV--TGIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~--~~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      +|+..+.||+|+||.||+             +... ++..+|+|.+.....  ...+ +.+|+.+++.++|+|+++++ +
T Consensus         1 ~~~~~~~l~~g~~~~v~~-------------~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~-~   66 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYL-------------AKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFF-A   66 (257)
T ss_pred             CceEEEEecCCCcceEEE-------------EEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhh-h
Confidence            366678999999999999             7765 478899999864321  2334 88999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      .+......+ +++||+++++|.+++..... ..++|..+.
T Consensus        67 ~~~~~~~~~-lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~  104 (257)
T cd08225          67 SFQENGRLF-IVMEYCDGGDLMKRINRQRG-VLFSEDQIL  104 (257)
T ss_pred             eeccCCeEE-EEEecCCCCcHHHHHHhccC-CCCCHHHHH
Confidence            998888888 99999999999999865432 245665443

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=98.98  E-value=1.5e-09  Score=94.39  Aligned_cols=88  Identities=20%  Similarity=0.257  Sum_probs=73.9

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhCCCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ++|...+.||+|+||.||+             +... ++..||+|.+....   ..... |.+|+.++..++|+|+++++
T Consensus         2 ~~~~i~~~l~~g~~~~v~~-------------~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~   68 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYR-------------ATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYL   68 (267)
T ss_pred             cceeeeeeeccCCCeeEEE-------------EEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeee
Confidence            4677889999999999999             7654 57899999875422   12223 89999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCcccccc
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~  258 (282)
                       +++...+..+ +++||+++|+|.+++.
T Consensus        69 -~~~~~~~~~~-~v~e~~~~~~L~~~~~   94 (267)
T cd08228          69 -DSFIEDNELN-IVLELADAGDLSQMIK   94 (267)
T ss_pred             -eeEEECCeEE-EEEEecCCCcHHHHHH
Confidence             9998888888 9999999999998875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=98.97  E-value=1.3e-09  Score=109.43  Aligned_cols=89  Identities=17%  Similarity=0.118  Sum_probs=75.6

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc---hhH-HHHHHHHhhhCCCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT---GIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~---~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ++|...++||+|+||.||+             +... .+..||+|.+......   ..+ |.+|+.++..++||||++++
T Consensus         2 grYeIi~~LGkGgfG~VYl-------------A~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~   68 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYL-------------AYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVY   68 (932)
T ss_pred             CCeEEEEEEecCCCEEEEE-------------EEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEE
Confidence            4577789999999999999             7654 4789999998753222   223 99999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                       +++.+++..+ ++|||+++|+|.++|..
T Consensus        69 -~v~~d~~~ly-LVMEY~eGGSL~~lL~s   95 (932)
T PRK13184         69 -SICSDGDPVY-YTMPYIEGYTLKSLLKS   95 (932)
T ss_pred             -EEEeeCCEEE-EEEEcCCCCCHHHHHHH
Confidence             9999888888 99999999999998864

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=98.97  E-value=9.7e-10  Score=94.88  Aligned_cols=88  Identities=18%  Similarity=0.244  Sum_probs=73.7

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC-----chhH-HHHHHHHhhhCCCCccceec
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV-----TGIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~-----~~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      |...+.||+|+||.||+             +... ++..|++|.+.....     ...+ +.+|+.++..++|+|++++.
T Consensus         2 ~~~~~~ig~g~~~~vy~-------------~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~   68 (258)
T cd06632           2 WRKGELLGSGSFGSVYE-------------GLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYL   68 (258)
T ss_pred             ccccceeeecCCceEEE-------------EEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchhee
Confidence            45568899999999999             8765 688999998864321     1234 99999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                       +.+......+ +++||+++++|.+++...
T Consensus        69 -~~~~~~~~~~-lv~e~~~~~~L~~~~~~~   96 (258)
T cd06632          69 -GTEREEDNLY-IFLELVPGGSLAKLLKKY   96 (258)
T ss_pred             -eeEecCCeEE-EEEEecCCCcHHHHHHhc
Confidence             9998888888 999999999999998643

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=98.97  E-value=2.2e-09  Score=94.51  Aligned_cols=85  Identities=14%  Similarity=0.121  Sum_probs=71.4

Q ss_pred             CccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCccceeccce
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      +|+..+.||+|+||.||+             +.. ..+..||+|.+...... ... |.+|+.++.+++|+|+++++ +.
T Consensus         2 ~~~~~~~lg~g~~~~v~~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~-~~   67 (279)
T cd06619           2 DIQYQEILGHGNGGTVYK-------------AYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFY-GA   67 (279)
T ss_pred             cchheeeeccCCCeEEEE-------------EEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEE-EE
Confidence            456668999999999999             764 45789999998654322 234 99999999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCcccc
Q 043820          234 VIRPGYKVGLILELKPDPDPNPD  256 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~  256 (282)
                      +...+..+ ++|||+++|+|..+
T Consensus        68 ~~~~~~~~-lv~e~~~~~~l~~~   89 (279)
T cd06619          68 FFVENRIS-ICTEFMDGGSLDVY   89 (279)
T ss_pred             EEECCEEE-EEEecCCCCChHHh
Confidence            99888888 99999999999755

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=98.97  E-value=1.1e-09  Score=97.31  Aligned_cols=104  Identities=19%  Similarity=0.202  Sum_probs=76.2

Q ss_pred             ccCccccceecccCccceeccccccccc---cccceee-cCCCcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCccce
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICF---AGTITGA-RIDARVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPR  228 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~---~~~~~g~-~~~~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~  228 (282)
                      .++|+..+.||+|+||.||++...+...   +.+.... ..+...+|+|.+...... ... |.+|+.++..++|+||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~   83 (296)
T cd05095           4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR   83 (296)
T ss_pred             hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            3467788999999999999843222110   0000000 112457899998754333 334 999999999999999999


Q ss_pred             eccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          229 SYPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       229 l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ++ +++...+..+ ++|||+++|+|.+++...
T Consensus        84 ~~-~~~~~~~~~~-lv~e~~~~~~L~~~l~~~  113 (296)
T cd05095          84 LL-AVCITSDPLC-MITEYMENGDLNQFLSRH  113 (296)
T ss_pred             EE-EEEecCCccE-EEEEeCCCCcHHHHHHhc
Confidence            99 9998888888 999999999999998754

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=98.97  E-value=1.2e-09  Score=94.51  Aligned_cols=98  Identities=14%  Similarity=0.187  Sum_probs=79.3

Q ss_pred             cCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccceE
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSVV  234 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~~  234 (282)
                      ++|+..+.||+|+||.||+             +.. .+..||+|.+..... ..+ +.+|+.++..++|+|+++++ +.+
T Consensus         6 ~~~~~~~~ig~g~~g~v~~-------------~~~-~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~-~~~   69 (256)
T cd05039           6 KELKLGATIGKGEFGDVML-------------GDY-RGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLL-GVV   69 (256)
T ss_pred             hhccceeeeecCCCceEEE-------------EEe-cCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeE-EEE
Confidence            4567779999999999999             765 378899999976544 344 99999999999999999999 999


Q ss_pred             eeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          235 IRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       235 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      ......+ +||||+++++|.+++..... ..++|...
T Consensus        70 ~~~~~~~-~v~e~~~~~~L~~~~~~~~~-~~~~~~~~  104 (256)
T cd05039          70 LQGNPLY-IVTEYMAKGSLVDYLRSRGR-AVITLAQQ  104 (256)
T ss_pred             cCCCCeE-EEEEecCCCcHHHHHHhcCC-CCCCHHHH
Confidence            8877777 99999999999999865431 23455433

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=98.97  E-value=1.8e-09  Score=94.90  Aligned_cols=87  Identities=21%  Similarity=0.266  Sum_probs=72.9

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCccceeccceE
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRSYPSVV  234 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l~~g~~  234 (282)
                      |...+.||+|+||.||+             +... ++..+|+|.+....... .. |.+|+.++.+++|+||++++ +.+
T Consensus         6 ~~~~~~ig~G~~~~vy~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~-~~~   71 (277)
T cd06641           6 FTKLEKIGKGSFGEVFK-------------GIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY-GSY   71 (277)
T ss_pred             hhhheeEeecCCeEEEE-------------EEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEE-EEE
Confidence            45558899999999999             7643 57899999876433222 33 99999999999999999999 999


Q ss_pred             eeCCeEEEEEEecCCCCCccccccC
Q 043820          235 IRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       235 ~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ..++..+ +||||+++|+|.+++..
T Consensus        72 ~~~~~~~-lv~e~~~~~~l~~~i~~   95 (277)
T cd06641          72 LKDTKLW-IIMEYLGGGSALDLLEP   95 (277)
T ss_pred             EeCCeEE-EEEEeCCCCcHHHHHhc
Confidence            9888888 99999999999998853

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=98.97  E-value=1.5e-09  Score=93.76  Aligned_cols=89  Identities=25%  Similarity=0.292  Sum_probs=74.9

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC--chhH-HHHHHHHhhhCCCCccceeccc
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV--TGIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~--~~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      +|+..+.||+|+||.||+             +... ++..|++|.+.....  .... +.+|+.+++.++|+|+++++ +
T Consensus         1 ~~~~~~~l~~g~~~~v~~-------------~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~-~   66 (256)
T cd08529           1 DFEILNKIGKGSFGVVFK-------------VVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYY-E   66 (256)
T ss_pred             CceEeEEecCCCCeEEEE-------------EEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehhe-e
Confidence            356678999999999999             7654 578999998864322  2233 99999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      .+...+..+ +||||+++++|.+++...
T Consensus        67 ~~~~~~~~~-lv~e~~~~~~L~~~l~~~   93 (256)
T cd08529          67 SFLDKGKLN-IVMEYAENGDLHKLLKMQ   93 (256)
T ss_pred             eeccCCEEE-EEEEeCCCCcHHHHHHHh
Confidence            999888888 999999999999998754

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=98.97  E-value=1.3e-09  Score=103.71  Aligned_cols=87  Identities=14%  Similarity=0.115  Sum_probs=72.7

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-C-CcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccceE
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-D-ARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSVV  234 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~-~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~~  234 (282)
                      |...+.||+|+||.||+             +... + +..||+|.+......... +.+|+.++..++|||||+++ +.+
T Consensus        69 y~~~~~lg~G~~g~vy~-------------a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~-~~~  134 (478)
T PTZ00267         69 YVLTTLVGRNPTTAAFV-------------ATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHF-DDF  134 (478)
T ss_pred             EEEEEEEEeCCCcEEEE-------------EEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEE-EEE
Confidence            67779999999999999             6533 3 577888877544333334 88999999999999999999 999


Q ss_pred             eeCCeEEEEEEecCCCCCccccccC
Q 043820          235 IRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       235 ~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ...+..+ |||||+++|+|.++|.+
T Consensus       135 ~~~~~~~-lv~E~~~gg~L~~~l~~  158 (478)
T PTZ00267        135 KSDDKLL-LIMEYGSGGDLNKQIKQ  158 (478)
T ss_pred             EECCEEE-EEEECCCCCCHHHHHHH
Confidence            9888888 99999999999998864

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=98.97  E-value=1e-09  Score=99.00  Aligned_cols=84  Identities=11%  Similarity=0.000  Sum_probs=69.8

Q ss_pred             ceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhCCCCccceeccceEee
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKIYARSRPRSYPSVVIR  236 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~H~nlv~l~~g~~~~  236 (282)
                      +.||+|+||.||+             +... ++..||+|.+....   ..... +.+|+.++..++|+||+++. +.+..
T Consensus         1 ~~lG~G~~g~Vy~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~-~~~~~   66 (323)
T cd05571           1 KLLGKGTFGKVIL-------------VREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALK-YSFQT   66 (323)
T ss_pred             CeeeeCCCeEEEE-------------EEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEE-EEEEc
Confidence            3689999999999             6644 58899999987432   12223 88999999999999999999 98888


Q ss_pred             CCeEEEEEEecCCCCCccccccCC
Q 043820          237 PGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       237 ~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      .+..+ +||||+++|+|.+++...
T Consensus        67 ~~~~~-lv~e~~~~~~L~~~l~~~   89 (323)
T cd05571          67 HDRLC-FVMEYANGGELFFHLSRE   89 (323)
T ss_pred             CCEEE-EEEeCCCCCcHHHHHHHc
Confidence            88888 999999999999888653

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=98.96  E-value=1.1e-09  Score=95.33  Aligned_cols=98  Identities=19%  Similarity=0.216  Sum_probs=77.1

Q ss_pred             CccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccceEe
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSVVI  235 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~~~  235 (282)
                      .|.....||+|+||.||+             +....+..+|+|.+..... ..+ |.+|+.++..++|+|++++. +++.
T Consensus         7 ~~~~~~~ig~g~~~~v~~-------------~~~~~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~-~~~~   71 (260)
T cd05069           7 SLRLDVKLGQGCFGEVWM-------------GTWNGTTKVAIKTLKPGTM-MPEAFLQEAQIMKKLRHDKLVPLY-AVVS   71 (260)
T ss_pred             HeeeeeeecCcCCCeEEE-------------EEEcCCceEEEEEcccCCc-cHHHHHHHHHHHHhCCCCCeeeEE-EEEc
Confidence            466678999999999999             8776667899998865433 334 99999999999999999999 8764


Q ss_pred             eCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          236 RPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       236 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                       .+..+ ++|||+++|+|.+++.... ...++|..+.
T Consensus        72 -~~~~~-~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~  105 (260)
T cd05069          72 -EEPIY-IVTEFMGKGSLLDFLKEGD-GKYLKLPQLV  105 (260)
T ss_pred             -CCCcE-EEEEcCCCCCHHHHHhhCC-CCCCCHHHHH
Confidence             45566 9999999999999997543 2245665443

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=98.96  E-value=7.8e-10  Score=97.53  Aligned_cols=92  Identities=16%  Similarity=0.130  Sum_probs=71.4

Q ss_pred             ecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc---hhH-HHHHHHHhhhCCCCccceeccceEeeCC
Q 043820          164 LGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT---GIF-FARSVTEVAKIYARSRPRSYPSVVIRPG  238 (282)
Q Consensus       164 lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~---~~~-f~~e~~~l~~l~H~nlv~l~~g~~~~~~  238 (282)
                      ||+|+||.||+             +... ++..+|+|.+......   ..+ +..|+.++..++|+||+++. +.+....
T Consensus         1 lg~G~~g~Vy~-------------~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~-~~~~~~~   66 (280)
T cd05608           1 LGKGGFGEVSA-------------CQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLA-YAFQTKT   66 (280)
T ss_pred             CCCCCceeEEE-------------EEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeee-EEEcCCC
Confidence            69999999999             7654 5789999998643222   223 78899999999999999999 8888888


Q ss_pred             eEEEEEEecCCCCCccccccCCCC-CcCCCCCc
Q 043820          239 YKVGLILELKPDPDPNPDRLHSSR-VRSLQYPD  270 (282)
Q Consensus       239 ~~~~lv~Ey~~~GsL~~~l~~~~~-~~~l~W~~  270 (282)
                      ..+ +||||+++|+|..++..... ...+++..
T Consensus        67 ~~~-lv~e~~~~g~L~~~~~~~~~~~~~l~~~~   98 (280)
T cd05608          67 DLC-LVMTIMNGGDLRYHIYNVDEENPGFPEPR   98 (280)
T ss_pred             eEE-EEEeCCCCCCHHHHHHhccccCCCCCHHH
Confidence            877 99999999999988754221 22455544

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=98.96  E-value=5.7e-10  Score=96.50  Aligned_cols=92  Identities=14%  Similarity=0.191  Sum_probs=71.6

Q ss_pred             ceecccCccceeccccccccccccceeecCC-C----------cEEEEEEccCCCCchhH-HHHHHHHhhhCCCCcccee
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARID-A----------RVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~-~----------~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      +.||+|+||.||+             +...+ +          ..+++|.+...... .. |.+|+.++..++|+|++++
T Consensus         1 ~~lg~G~~~~v~~-------------~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~   66 (259)
T cd05037           1 EHLGQGTFTNIYK-------------GVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKL   66 (259)
T ss_pred             CcccccccceEEE-------------EEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhhe
Confidence            3689999999999             66543 2          35788877644333 44 9999999999999999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      + |.+.. +..+ +||||+++|+|.+++.....  .++|..++
T Consensus        67 ~-~~~~~-~~~~-lv~e~~~~~~L~~~l~~~~~--~~~~~~~~  104 (259)
T cd05037          67 Y-GVCVR-DENI-MVEEYVKFGPLDVFLHREKN--NVSLHWKL  104 (259)
T ss_pred             e-eEEec-CCcE-EEEEcCCCCcHHHHHHhhcc--CCCHHHHH
Confidence            9 99887 6667 99999999999999976442  45555443

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=98.96  E-value=1.1e-09  Score=96.13  Aligned_cols=99  Identities=21%  Similarity=0.238  Sum_probs=78.2

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCccceeccce
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      +|+..+.||+|++|.||+             +... ++..||+|.+....... .. +.+|+.++..++|+|+++++ +.
T Consensus         1 ~y~~~~~l~~g~~~~v~~-------------~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~-~~   66 (284)
T cd07836           1 NFKQLEKLGEGTYATVYK-------------GRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLH-DV   66 (284)
T ss_pred             CceEeeeeccCCceEEEE-------------EEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeee-ee
Confidence            466779999999999999             7765 57899999987543332 23 88999999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      +...+..+ +||||+++ +|.+++........++|...
T Consensus        67 ~~~~~~~~-lv~e~~~~-~l~~~~~~~~~~~~~~~~~~  102 (284)
T cd07836          67 IHTENKLM-LVFEYMDK-DLKKYMDTHGVRGALDPNTV  102 (284)
T ss_pred             EeeCCcEE-EEEecCCc-cHHHHHHhcCCCCCcCHHHH
Confidence            99888888 99999995 88888765432234555543

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=98.96  E-value=1.7e-09  Score=96.38  Aligned_cols=89  Identities=20%  Similarity=0.271  Sum_probs=73.4

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCccceecc
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      .++|...+.||+|+||.||+             +... ++..||+|.+....... .. +.+|+.++..++|+||+++. 
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~-   69 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYK-------------GKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLH-   69 (303)
T ss_pred             cccceEeeeEEecCCEEEEE-------------EEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEE-
Confidence            35678889999999999999             7755 57899999987543322 23 88999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +++......+ +||||++ ++|.+++..
T Consensus        70 ~~~~~~~~~~-lv~e~~~-~~l~~~~~~   95 (303)
T cd07869          70 DIIHTKETLT-LVFEYVH-TDLCQYMDK   95 (303)
T ss_pred             EEEecCCeEE-EEEECCC-cCHHHHHHh
Confidence            9988888877 9999996 678777754

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=98.96  E-value=1e-09  Score=99.30  Aligned_cols=88  Identities=15%  Similarity=0.057  Sum_probs=73.6

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhCCCCccceecc
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      +|...+.||+|+||.||+             +... .+..+|+|.+....   ..... |..|+.++..++|+||+++. 
T Consensus         2 ~y~~~~~lG~G~fg~V~~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~-   67 (332)
T cd05623           2 DFEILKVIGRGAFGEVAV-------------VKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLH-   67 (332)
T ss_pred             CceEEEEEEeCCCeEEEE-------------EEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEE-
Confidence            577779999999999999             7655 46789999986421   11223 88999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +.+...+..+ +||||+++|+|.+++..
T Consensus        68 ~~~~~~~~~~-lv~ey~~~g~L~~~l~~   94 (332)
T cd05623          68 YAFQDENNLY-LVMDYYVGGDLLTLLSK   94 (332)
T ss_pred             EEEecCCEEE-EEEeccCCCcHHHHHHH
Confidence            9888888888 99999999999999965

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=98.96  E-value=7.5e-10  Score=100.53  Aligned_cols=89  Identities=17%  Similarity=0.181  Sum_probs=75.6

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhCCCCccceecc
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      +|...+.||+|+||.||+             +... ++..||+|.+....   ..... +.+|+.++..++|+||++++ 
T Consensus         2 ~y~~~~~lg~G~~g~Vy~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~-   67 (350)
T cd05573           2 DFEVIKVIGRGAFGEVWL-------------VRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLY-   67 (350)
T ss_pred             CceEEEEEEeCCcEEEEE-------------EEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchh-
Confidence            577789999999999999             7654 58899999986432   12234 89999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +.+.+++..+ +||||+++|+|.+++...
T Consensus        68 ~~~~~~~~~~-lv~e~~~~~~L~~~l~~~   95 (350)
T cd05573          68 YSFQDEEHLY-LVMEYMPGGDLMNLLIRK   95 (350)
T ss_pred             hheecCCeEE-EEEcCCCCCCHHHHHHHc
Confidence            9988888888 999999999999998754

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=98.96  E-value=1.1e-09  Score=96.88  Aligned_cols=98  Identities=14%  Similarity=0.111  Sum_probs=77.4

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC---chhH-HHHHHHHhhhCCCCccceeccc
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV---TGIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~---~~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      |...+.||+|+||.||+             +... ++..+|+|.+.....   .... +.+|+.+|..++|+|++++. +
T Consensus         2 ~~~~~~lg~G~~g~vy~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~-~   67 (285)
T cd05632           2 FRQYRVLGKGGFGEVCA-------------CQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLA-Y   67 (285)
T ss_pred             ceEEEEEecCCCeEEEE-------------EEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEE-E
Confidence            45568899999999999             7654 588999999865322   2233 78899999999999999999 8


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      .+..++..+ ++|||+++|+|.+++..... ..++|...
T Consensus        68 ~~~~~~~~~-lv~e~~~~~~L~~~~~~~~~-~~~~~~~~  104 (285)
T cd05632          68 AYETKDALC-LVLTIMNGGDLKFHIYNMGN-PGFEEERA  104 (285)
T ss_pred             EEecCCEEE-EEEEeccCccHHHHHHHhcC-CCCCHHHH
Confidence            888888887 99999999999998865432 24566544

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=98.96  E-value=7.3e-10  Score=96.77  Aligned_cols=106  Identities=12%  Similarity=0.017  Sum_probs=73.1

Q ss_pred             ceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccceEeeCCeE
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSVVIRPGYK  240 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~~~~~~~~  240 (282)
                      +.||+|+||.||++....-.......+.......|++|.+......... |.+|+.++..++||||++++ |++......
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~-~~~~~~~~~   79 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLY-GVCVRDVEN   79 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEE-EEEecCCCC
Confidence            3689999999999321110000000000112346899988654443444 89999999999999999999 999988888


Q ss_pred             EEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          241 VGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       241 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      + ++|||+++|+|+.++....  ..++|..+
T Consensus        80 ~-lv~e~~~~~~l~~~~~~~~--~~~~~~~~  107 (262)
T cd05077          80 I-MVEEFVEFGPLDLFMHRKS--DVLTTPWK  107 (262)
T ss_pred             E-EEEecccCCCHHHHHHhcC--CCCCHHHH
Confidence            8 9999999999999886543  23555544

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=98.96  E-value=1e-09  Score=98.67  Aligned_cols=84  Identities=15%  Similarity=0.142  Sum_probs=69.2

Q ss_pred             ceecccCccceeccccccccccccceeec----CCCcEEEEEEccCCCCc--hhH-HHHHHHHhhhCCCCccceeccceE
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGAR----IDARVVAARIVFAGSVT--GIF-FARSVTEVAKIYARSRPRSYPSVV  234 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~----~~~~~vAvK~l~~~~~~--~~~-f~~e~~~l~~l~H~nlv~l~~g~~  234 (282)
                      +.||+|+||.||+             +..    ..+..+|+|.+......  ... +..|+.++.+++|+||++++ +.+
T Consensus         2 ~~lg~G~~g~Vy~-------------~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~-~~~   67 (318)
T cd05582           2 KVLGQGSFGKVFL-------------VRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLH-YAF   67 (318)
T ss_pred             ceeeeCCCEEEEE-------------EEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEE-EEE
Confidence            6799999999998             442    25789999998753222  223 78899999999999999999 998


Q ss_pred             eeCCeEEEEEEecCCCCCccccccCC
Q 043820          235 IRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       235 ~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ..++..+ +||||+++|+|.+++...
T Consensus        68 ~~~~~~~-lv~e~~~~~~L~~~l~~~   92 (318)
T cd05582          68 QTEGKLY-LILDFLRGGDLFTRLSKE   92 (318)
T ss_pred             EcCCEEE-EEEcCCCCCcHHHHHHHc
Confidence            8888888 999999999999988643

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=98.96  E-value=1.8e-09  Score=96.03  Aligned_cols=89  Identities=10%  Similarity=0.057  Sum_probs=77.0

Q ss_pred             cCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      .+|...+.||+|+||.||+             +.. .++..||+|.+........+ +.+|+.+++.++|+|+++++ +.
T Consensus        19 ~~y~~~~~lg~g~~g~v~~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~-~~   84 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYT-------------AIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYL-DS   84 (297)
T ss_pred             hhceeeeeeccCCCeEEEE-------------EEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEE-EE
Confidence            4577779999999999999             764 46889999998755444455 99999999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccC
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +..++..+ +||||+++++|.+++..
T Consensus        85 ~~~~~~~~-lv~e~~~~~~L~~~~~~  109 (297)
T cd06656          85 YLVGDELW-VVMEYLAGGSLTDVVTE  109 (297)
T ss_pred             EecCCEEE-EeecccCCCCHHHHHHh
Confidence            99888888 99999999999998854

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=98.96  E-value=9.3e-10  Score=98.70  Aligned_cols=82  Identities=15%  Similarity=0.118  Sum_probs=68.7

Q ss_pred             ecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhCCCCccceeccceEeeCC
Q 043820          164 LGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKIYARSRPRSYPSVVIRPG  238 (282)
Q Consensus       164 lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~H~nlv~l~~g~~~~~~  238 (282)
                      ||+|+||.||+             +... .+..||+|.+....   ..... +.+|+.++.+++|+||+++. +.+...+
T Consensus         1 lg~G~~g~Vy~-------------~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~-~~~~~~~   66 (312)
T cd05585           1 IGKGSFGKVMQ-------------VRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLK-FSFQSPE   66 (312)
T ss_pred             CCcCCCeEEEE-------------EEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEecee-eEEecCC
Confidence            69999999999             7654 47899999986432   22233 88999999999999999999 9988888


Q ss_pred             eEEEEEEecCCCCCccccccCC
Q 043820          239 YKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       239 ~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ..+ +||||+++|+|.+++...
T Consensus        67 ~~~-lv~e~~~~g~L~~~l~~~   87 (312)
T cd05585          67 KLY-LVLAFINGGELFHHLQRE   87 (312)
T ss_pred             eEE-EEEcCCCCCcHHHHHHhc
Confidence            888 999999999999998653

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=98.96  E-value=1.4e-09  Score=95.92  Aligned_cols=86  Identities=16%  Similarity=0.127  Sum_probs=71.4

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC--chhH-HHHHHHHhhhCCCCccceeccc
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV--TGIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~--~~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      +|...+.||+|+||.||+             +... ++..||+|++.....  ...+ +.+|+.++..++|+||+++. +
T Consensus         2 ~y~~~~~lg~g~~~~v~~-------------~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~-~   67 (287)
T cd07848           2 KFEVLGVVGEGAYGVVLK-------------CRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELK-E   67 (287)
T ss_pred             CceEEEEecccCCEEEEE-------------EEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchh-h
Confidence            577779999999999999             7765 478899999865322  2234 89999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccc
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDR  257 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l  257 (282)
                      ++...+..+ +||||++++.|..+.
T Consensus        68 ~~~~~~~~~-lv~e~~~~~~l~~~~   91 (287)
T cd07848          68 AFRRRGKLY-LVFEYVEKNMLELLE   91 (287)
T ss_pred             hEecCCEEE-EEEecCCCCHHHHHH
Confidence            998888888 999999998776554

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=98.95  E-value=1.2e-09  Score=94.99  Aligned_cols=91  Identities=18%  Similarity=0.143  Sum_probs=70.6

Q ss_pred             eecccCccceeccccccccccccceeecC---CCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCccceeccceEeeC
Q 043820          163 KLGEGGFGPVYKVVAAGICFAGTITGARI---DARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRSYPSVVIRP  237 (282)
Q Consensus       163 ~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~---~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l~~g~~~~~  237 (282)
                      .||+|+||.||+             |...   .+..||+|.+....... .+ |.+|+.++.+++|+||++++ |.+. .
T Consensus         2 ~ig~G~~g~v~~-------------~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~-~~~~-~   66 (257)
T cd05115           2 ELGSGNFGCVKK-------------GVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMI-GVCE-A   66 (257)
T ss_pred             ccCCCCcccEEE-------------EEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEE-EEEc-C
Confidence            489999999999             7543   35679999987543332 34 99999999999999999999 9874 4


Q ss_pred             CeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          238 GYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       238 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      +..+ +||||+++|+|.+++....  ..+++...
T Consensus        67 ~~~~-lv~e~~~~~~L~~~l~~~~--~~~~~~~~   97 (257)
T cd05115          67 EALM-LVMEMASGGPLNKFLSGKK--DEITVSNV   97 (257)
T ss_pred             CCeE-EEEEeCCCCCHHHHHHhCC--CCCCHHHH
Confidence            5566 9999999999999986533  24555544

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.95  E-value=1.5e-09  Score=99.88  Aligned_cols=91  Identities=16%  Similarity=0.190  Sum_probs=75.7

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCC----CC-chhH-HHHHHHHhhhCC-CCc
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAG----SV-TGIF-FARSVTEVAKIY-ARS  225 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~----~~-~~~~-f~~e~~~l~~l~-H~n  225 (282)
                      ..+.|...+.||+|+||+|+.             +... .+..||+|.+...    .. ...+ ..+|+.+++.++ |||
T Consensus        15 ~~g~y~~~~~lG~GsfgkV~~-------------a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~Hpn   81 (370)
T KOG0583|consen   15 SIGKYELGRTLGSGSFGKVKL-------------AKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPN   81 (370)
T ss_pred             ccCceeeeeeecCCCCeeEEE-------------eeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCC
Confidence            455778889999999999999             7543 5799999977653    11 1233 778999999998 999


Q ss_pred             cceeccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          226 RPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       226 lv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      |++++ .+.......+ +||||+.+|+|.++|.+
T Consensus        82 I~~l~-ev~~t~~~~~-ivmEy~~gGdL~~~i~~  113 (370)
T KOG0583|consen   82 IIRLL-EVFATPTKIY-IVMEYCSGGDLFDYIVN  113 (370)
T ss_pred             EeEEE-EEEecCCeEE-EEEEecCCccHHHHHHH
Confidence            99999 8888888877 99999999999999987

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=98.95  E-value=1.5e-09  Score=95.65  Aligned_cols=89  Identities=21%  Similarity=0.254  Sum_probs=74.4

Q ss_pred             CccccceecccCccceeccccccccccccceeec------CCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCcccee
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR------IDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~------~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      ++....+||+|+||.||+             +..      .++..+|+|.+......... |.+|+.++..++|+||+++
T Consensus         6 ~~~~~~~lg~g~~g~v~~-------------~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~   72 (280)
T cd05092           6 DIVLKWELGEGAFGKVFL-------------AECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRF   72 (280)
T ss_pred             hceeccccCCccCCeEEE-------------eEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceE
Confidence            456668999999999999             532      23568999988765544455 9999999999999999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      + +.+......+ +++||+++|+|.+++...
T Consensus        73 ~-~~~~~~~~~~-lv~e~~~~~~L~~~i~~~  101 (280)
T cd05092          73 Y-GVCTEGRPLL-MVFEYMRHGDLNRFLRSH  101 (280)
T ss_pred             E-EEEecCCceE-EEEecCCCCCHHHHHHhc
Confidence            9 9998888888 999999999999998753

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=98.95  E-value=1.9e-09  Score=95.46  Aligned_cols=89  Identities=17%  Similarity=0.194  Sum_probs=72.9

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCccceeccc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      ++|...+.||+|+||.||+             +... ++..||+|.+...... ... +.+|+.++..++|+||++++ +
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~-~   70 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFK-------------GRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLH-D   70 (288)
T ss_pred             ccceEeeEEecCCCEEEEE-------------EEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEE-E
Confidence            3577779999999999999             7654 5789999998643322 233 88999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +.......+ +||||+++ +|.+++...
T Consensus        71 ~~~~~~~~~-lv~e~~~~-~l~~~l~~~   96 (288)
T cd07871          71 IIHTERCLT-LVFEYLDS-DLKQYLDNC   96 (288)
T ss_pred             EEcCCCeEE-EEEeCCCc-CHHHHHHhc
Confidence            988887777 99999984 898887543

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=98.95  E-value=1.7e-09  Score=97.61  Aligned_cols=84  Identities=8%  Similarity=-0.026  Sum_probs=70.5

Q ss_pred             cceeccc--CccceeccccccccccccceeecC-CCcEEEEEEccCCCCch--hH-HHHHHHHhhhCCCCccceeccceE
Q 043820          161 NNKLGEG--GFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG--IF-FARSVTEVAKIYARSRPRSYPSVV  234 (282)
Q Consensus       161 ~~~lG~G--~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l~H~nlv~l~~g~~  234 (282)
                      ..+||+|  +|++||+             +... ++..||+|.+.......  .+ +.+|+.+++.++||||++++ +++
T Consensus         3 ~~~ig~G~~~~~~v~~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~-~~~   68 (327)
T cd08227           3 LTVIGRGFEDLMTVNL-------------ARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYR-ATF   68 (327)
T ss_pred             hhhccccccceEEEEE-------------EeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEE-EEE
Confidence            3789999  7889999             7654 68899999997543222  23 78899999999999999999 999


Q ss_pred             eeCCeEEEEEEecCCCCCccccccC
Q 043820          235 IRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       235 ~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ..++..+ +||||+++|+|.+++..
T Consensus        69 ~~~~~~~-lv~e~~~~~~l~~~~~~   92 (327)
T cd08227          69 IADNELW-VVTSFMAYGSAKDLICT   92 (327)
T ss_pred             EECCEEE-EEEeccCCCcHHHHHHh
Confidence            9988888 99999999999999854

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=98.95  E-value=1.5e-09  Score=98.13  Aligned_cols=84  Identities=11%  Similarity=-0.000  Sum_probs=69.7

Q ss_pred             ceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhCCCCccceeccceEee
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKIYARSRPRSYPSVVIR  236 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~H~nlv~l~~g~~~~  236 (282)
                      +.||+|+||.||+             +... ++..||+|.+....   ..... +.+|+.++..++|+||+++. +.+..
T Consensus         1 ~~lG~G~~g~Vy~-------------~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~-~~~~~   66 (328)
T cd05593           1 KLLGKGTFGKVIL-------------VREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLK-YSFQT   66 (328)
T ss_pred             CeeeeCCCEEEEE-------------EEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceE-EEEEc
Confidence            3689999999999             6643 58899999987532   12223 88999999999999999999 88888


Q ss_pred             CCeEEEEEEecCCCCCccccccCC
Q 043820          237 PGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       237 ~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      .+..+ +||||+++|+|..++...
T Consensus        67 ~~~~~-lv~Ey~~~g~L~~~l~~~   89 (328)
T cd05593          67 KDRLC-FVMEYVNGGELFFHLSRE   89 (328)
T ss_pred             CCEEE-EEEeCCCCCCHHHHHHhc
Confidence            88888 999999999999888643

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=98.95  E-value=3.1e-10  Score=98.70  Aligned_cols=100  Identities=11%  Similarity=0.149  Sum_probs=74.1

Q ss_pred             ceecccCccceeccccccccccccceee--cCCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccceEeeCC
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGA--RIDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSVVIRPG  238 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~--~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~~~~~~  238 (282)
                      +.||+|+||.||++.....       +.  ......+|+|.+........+ |.+|+.++..++|+|+++++ |.+..++
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~-------~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~-~~~~~~~   72 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREV-------GDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNY-GVCVCGD   72 (258)
T ss_pred             CCCCcccchhheeeeeccc-------ccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhhee-eEEEeCC
Confidence            3689999999999322111       00  012345888888654444444 89999999999999999999 9999888


Q ss_pred             eEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          239 YKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       239 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      ..+ +||||+++|+|.+++.....  .++|..++
T Consensus        73 ~~~-lv~e~~~~g~L~~~l~~~~~--~~~~~~~~  103 (258)
T cd05078          73 ESI-MVQEYVKFGSLDTYLKKNKN--LINISWKL  103 (258)
T ss_pred             CcE-EEEecCCCCcHHHHHhcCCC--CCCHHHHH
Confidence            888 99999999999999976442  45555543

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=98.95  E-value=1.6e-09  Score=95.27  Aligned_cols=89  Identities=19%  Similarity=0.238  Sum_probs=73.1

Q ss_pred             CccccceecccCccceeccccccccccccceeecC------CCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCccce
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI------DARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPR  228 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~------~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~  228 (282)
                      +|+..+.||+|+||.||+             +...      ....||+|.+....... .. |.+|+.++..++|+||++
T Consensus         6 ~~~~~~~lg~G~~g~Vy~-------------~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~   72 (283)
T cd05048           6 AVRFLEELGEGAFGKVYK-------------GELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVC   72 (283)
T ss_pred             HcchhhcccCccCCcEEE-------------EEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccce
Confidence            466678999999999999             5432      23679999987543333 23 999999999999999999


Q ss_pred             eccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          229 SYPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       229 l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ++ +++......+ ++|||+++|+|.++|...
T Consensus        73 ~~-~~~~~~~~~~-~~~e~~~~~~L~~~l~~~  102 (283)
T cd05048          73 LL-GVCTKEQPTC-MLFEYLAHGDLHEFLVRN  102 (283)
T ss_pred             EE-EEEcCCCceE-EEEecCCCCcHHHHHHhc
Confidence            99 9998888888 999999999999998653

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=98.95  E-value=1.4e-09  Score=96.81  Aligned_cols=99  Identities=9%  Similarity=0.094  Sum_probs=81.4

Q ss_pred             cCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      .+|+..+.||.|+||.||+             +.. .++..|++|.+........+ +.+|+.+++.++|+|+++++ +.
T Consensus        19 ~~y~~~~~lg~g~~g~vy~-------------~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~-~~   84 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFT-------------AIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFL-DS   84 (296)
T ss_pred             ceEEEEEEEecCCCeEEEE-------------EEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeee-ee
Confidence            3577778999999999999             764 46889999998755444445 99999999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcccc
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPAQ  273 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~~  273 (282)
                      +...+..+ +|+||+++|+|.+++.+.    .++|.++.+
T Consensus        85 ~~~~~~~~-lv~e~~~~~~L~~~~~~~----~l~~~~~~~  119 (296)
T cd06655          85 FLVGDELF-VVMEYLAGGSLTDVVTET----CMDEAQIAA  119 (296)
T ss_pred             EecCceEE-EEEEecCCCcHHHHHHhc----CCCHHHHHH
Confidence            98888888 999999999999988542    356665543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=98.95  E-value=1.3e-09  Score=95.36  Aligned_cols=83  Identities=13%  Similarity=0.073  Sum_probs=67.5

Q ss_pred             eecccCccceeccccccccccccceeecCC---CcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCccceeccceEeeC
Q 043820          163 KLGEGGFGPVYKVVAAGICFAGTITGARID---ARVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPRSYPSVVIRP  237 (282)
Q Consensus       163 ~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~---~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~l~~g~~~~~  237 (282)
                      +||+|+||.||+             +...+   ...+++|.+...... ..+ |.+|+.++..++||||++++ |.+...
T Consensus         2 ~lg~G~~g~v~~-------------~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~-~~~~~~   67 (268)
T cd05086           2 EIGNGWFGKVLL-------------SEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCL-GQCVEA   67 (268)
T ss_pred             cCCCCcCceEEE-------------EEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheE-EEecCC
Confidence            589999999999             65332   245677777654333 334 99999999999999999999 999988


Q ss_pred             CeEEEEEEecCCCCCccccccCC
Q 043820          238 GYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       238 ~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ...+ +||||+++|+|.+++...
T Consensus        68 ~~~~-lv~e~~~~~~L~~~l~~~   89 (268)
T cd05086          68 IPYL-LVFEYCELGDLKSYLSQE   89 (268)
T ss_pred             CccE-EEEecCCCCcHHHHHHhh
Confidence            8888 999999999999999753

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.94  E-value=6.7e-10  Score=103.63  Aligned_cols=87  Identities=10%  Similarity=0.031  Sum_probs=74.6

Q ss_pred             CccccceecccCccceeccccccccccccceee-cCCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccceE
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGA-RIDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSVV  234 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~-~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~~  234 (282)
                      .|..-.+||+|+.|.||.             +. ...++.||+|++....-...+ .++|+.+|...+|+|||+++ ...
T Consensus       274 ~y~~~~kigqgaSG~vy~-------------A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl-~Sy  339 (550)
T KOG0578|consen  274 KYTDFKKIGQGATGGVYV-------------ARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFL-DSY  339 (550)
T ss_pred             hhcchhhhccccccceee-------------eeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHH-HHh
Confidence            355557899999999999             54 346789999999865555556 99999999999999999999 888


Q ss_pred             eeCCeEEEEEEecCCCCCcccccc
Q 043820          235 IRPGYKVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       235 ~~~~~~~~lv~Ey~~~GsL~~~l~  258 (282)
                      ...++.+ +|||||++|+|.+.+-
T Consensus       340 lv~deLW-VVMEym~ggsLTDvVt  362 (550)
T KOG0578|consen  340 LVGDELW-VVMEYMEGGSLTDVVT  362 (550)
T ss_pred             cccceeE-EEEeecCCCchhhhhh
Confidence            8888888 9999999999988874

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=98.94  E-value=2.2e-09  Score=94.33  Aligned_cols=87  Identities=20%  Similarity=0.256  Sum_probs=73.5

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCccceeccceE
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPRSYPSVV  234 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~l~~g~~  234 (282)
                      |+..+.||.|+||.||+             +... .+..||+|.+...... ... +.+|+.++..++|+|++++. +.+
T Consensus         6 y~~~~~lg~g~~~~vy~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~-~~~   71 (277)
T cd06640           6 FTKLERIGKGSFGEVFK-------------GIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY-GSY   71 (277)
T ss_pred             hhhhhhcccCCCeEEEE-------------EEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEE-EEE
Confidence            45558899999999999             7754 4789999988654322 234 99999999999999999999 999


Q ss_pred             eeCCeEEEEEEecCCCCCccccccC
Q 043820          235 IRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       235 ~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ..+...+ +||||+++|+|.+++..
T Consensus        72 ~~~~~~~-lv~e~~~~~~L~~~i~~   95 (277)
T cd06640          72 LKGTKLW-IIMEYLGGGSALDLLRA   95 (277)
T ss_pred             EECCEEE-EEEecCCCCcHHHHHhc
Confidence            9888888 99999999999998864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=98.94  E-value=1.2e-09  Score=95.65  Aligned_cols=91  Identities=20%  Similarity=0.269  Sum_probs=75.2

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC------CCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCcc
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI------DARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSR  226 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~------~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nl  226 (282)
                      .++|...+.||+|+||.||+             +...      .+..||+|.+....... .. |.+|+.++..++|+||
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~-------------~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i   71 (277)
T cd05032           5 REKITLIRELGQGSFGMVYE-------------GLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHV   71 (277)
T ss_pred             hHHeeEEeEecCCCCceEEE-------------EEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCce
Confidence            34677779999999999999             5432      34689999987544333 23 9999999999999999


Q ss_pred             ceeccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          227 PRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       227 v~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ++++ |++..+...+ ++|||+++|+|.+++...
T Consensus        72 ~~~~-~~~~~~~~~~-~v~e~~~~~~L~~~l~~~  103 (277)
T cd05032          72 VRLL-GVVSTGQPTL-VVMELMAKGDLKSYLRSR  103 (277)
T ss_pred             eEEE-EEEcCCCCcE-EEEecCCCCCHHHHHHhc
Confidence            9999 9998888888 999999999999998653

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=98.94  E-value=1.1e-09  Score=96.22  Aligned_cols=87  Identities=22%  Similarity=0.271  Sum_probs=72.6

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCccceeccceE
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRSYPSVV  234 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l~~g~~  234 (282)
                      |+..+.||+|+||.||+             |... .+..||+|.+....... .+ +.+|+.++.+++|+||+++. +.+
T Consensus         6 y~~~~~l~~g~~~~vy~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~-~~~   71 (277)
T cd06642           6 FTKLERIGKGSFGEVYK-------------GIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYY-GSY   71 (277)
T ss_pred             HHHHHHhcCCCCeeEEE-------------EEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhh-ccc
Confidence            44557899999999999             7654 47889999886443323 33 99999999999999999999 999


Q ss_pred             eeCCeEEEEEEecCCCCCccccccC
Q 043820          235 IRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       235 ~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ..++..+ +||||+++|+|.+++..
T Consensus        72 ~~~~~~~-lv~e~~~~~~L~~~~~~   95 (277)
T cd06642          72 LKGTKLW-IIMEYLGGGSALDLLKP   95 (277)
T ss_pred             ccCCceE-EEEEccCCCcHHHHhhc
Confidence            8888888 99999999999998854

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=98.94  E-value=1.4e-09  Score=96.29  Aligned_cols=94  Identities=18%  Similarity=0.247  Sum_probs=74.3

Q ss_pred             CccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccceEe
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSVVI  235 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~~~  235 (282)
                      +|...+.||+|+||.||.+...+.       ....++..+++|.+........+ |.+|+..+.+++|+||++++ +.+.
T Consensus         6 ~~~~~~~lg~g~~g~vy~~~~~~~-------~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~-~~~~   77 (291)
T cd05094           6 DIVLKRELGEGAFGKVFLAECYNL-------SPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFY-GVCG   77 (291)
T ss_pred             HeEEeeeecccCCCeEEEeEeecc-------CCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEE-EEEc
Confidence            466678999999999999211100       01123567899998765544455 99999999999999999999 9998


Q ss_pred             eCCeEEEEEEecCCCCCccccccC
Q 043820          236 RPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       236 ~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ..+..+ +||||+++|+|.+++..
T Consensus        78 ~~~~~~-lv~e~~~~~~L~~~i~~  100 (291)
T cd05094          78 DGDPLI-MVFEYMKHGDLNKFLRA  100 (291)
T ss_pred             cCCceE-EEEecCCCCcHHHHHHh
Confidence            888888 99999999999999864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=98.94  E-value=2.7e-09  Score=94.90  Aligned_cols=89  Identities=11%  Similarity=0.065  Sum_probs=76.2

Q ss_pred             cCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      ..|...+.||+|+||.||+             +.. .++..||+|.+........+ +.+|+.++..+.|+|+++++ +.
T Consensus        20 ~~y~~~~~lg~g~~~~v~~-------------~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~-~~   85 (296)
T cd06654          20 KKYTRFEKIGQGASGTVYT-------------AMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYL-DS   85 (296)
T ss_pred             cceeeEEEecCCCCeEEEE-------------EEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEE-EE
Confidence            4567778999999999999             764 35789999998765444455 99999999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccC
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +..+...+ +||||+++|+|.+++.+
T Consensus        86 ~~~~~~~~-lv~e~~~~~~L~~~~~~  110 (296)
T cd06654          86 YLVGDELW-VVMEYLAGGSLTDVVTE  110 (296)
T ss_pred             EEeCCEEE-EeecccCCCCHHHHHHh
Confidence            98888888 99999999999999854

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=98.94  E-value=3e-09  Score=92.25  Aligned_cols=90  Identities=12%  Similarity=0.137  Sum_probs=76.1

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCccceeccc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      ++|+..+.||.|+||.||+             +... ++..+|+|.+...... ... +.+|+..++.++|+|++++. +
T Consensus         1 ~~y~~~~~lg~g~~~~v~~-------------~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~-~   66 (267)
T cd06610           1 DDYELIEVIGVGATAVVYA-------------AICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYY-T   66 (267)
T ss_pred             CcceeeeeecCCCCeEEEE-------------EEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEE-E
Confidence            3677789999999999999             7644 5789999998654322 334 99999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      .+...+..+ +++||+++++|.+++...
T Consensus        67 ~~~~~~~~~-iv~e~~~~~~l~~~~~~~   93 (267)
T cd06610          67 SFVVGDELW-LVMPYLSGGSLLDIMKSS   93 (267)
T ss_pred             EEeeCCEEE-EEEeccCCCcHHHHHHHh
Confidence            998888888 999999999999998653

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=98.94  E-value=1.6e-09  Score=96.67  Aligned_cols=90  Identities=20%  Similarity=0.208  Sum_probs=73.0

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCc--EEEEEEccCCCCc-hhH-HHHHHHHhhhC-CCCcccee
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DAR--VVAARIVFAGSVT-GIF-FARSVTEVAKI-YARSRPRS  229 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~--~vAvK~l~~~~~~-~~~-f~~e~~~l~~l-~H~nlv~l  229 (282)
                      ++|+..+.||+|+||.||+             +... ++.  .+|+|.+...... ... |.+|+.++.++ +|+||+++
T Consensus         7 ~~~~~~~~lg~G~~g~V~~-------------a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~   73 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLK-------------ARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL   73 (303)
T ss_pred             hhceeeeeecCCCCceEEE-------------EEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceE
Confidence            4567779999999999999             7653 343  4688877643332 334 89999999999 89999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      + +++...+..+ +++||+++|+|.+++...
T Consensus        74 ~-~~~~~~~~~~-lv~e~~~~~~L~~~l~~~  102 (303)
T cd05088          74 L-GACEHRGYLY-LAIEYAPHGNLLDFLRKS  102 (303)
T ss_pred             E-EEECCCCCce-EEEEeCCCCcHHHHHHhc
Confidence            9 9998888888 999999999999999753

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=98.94  E-value=8.5e-10  Score=95.87  Aligned_cols=90  Identities=14%  Similarity=0.120  Sum_probs=76.0

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch---hH-HHHHHHHhhhCCCCccceecc
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG---IF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~---~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      +|.....||.|+||.|..             .... .|..+|+|+++....-.   .+ ..+|..+|..+.||.+++|. 
T Consensus        45 dfe~~~tlGtGSFGrV~L-------------Vr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~-  110 (355)
T KOG0616|consen   45 DFERLKTLGTGSFGRVHL-------------VREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLY-  110 (355)
T ss_pred             hhhheeeeccCccceEEE-------------EEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEE-
Confidence            455568999999999999             6544 57899999997643222   23 88999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccCCC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      +.+.+....+ |||||+++|.|..+|+...
T Consensus       111 ~t~~d~~~ly-mvmeyv~GGElFS~Lrk~~  139 (355)
T KOG0616|consen  111 GTFKDNSNLY-MVMEYVPGGELFSYLRKSG  139 (355)
T ss_pred             EeeccCCeEE-EEEeccCCccHHHHHHhcC
Confidence            9999999999 9999999999999998644

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=98.93  E-value=1.7e-09  Score=95.58  Aligned_cols=100  Identities=19%  Similarity=0.243  Sum_probs=81.3

Q ss_pred             ccCHHHHHHhccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhHHHHHHHHhhhC-C
Q 043820          145 LFELATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIFFARSVTEVAKI-Y  222 (282)
Q Consensus       145 ~~~~~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l-~  222 (282)
                      .+++.++..++++|...+.||+|+||.||+             +... ++..+|+|.+.........+.+|+.++.++ +
T Consensus        11 ~~~~~~~~~~~~~y~~~~~l~~g~~~~vy~-------------~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~   77 (291)
T cd06639          11 MLGLESLGDPTDTWEIIETIGKGTYGKVYK-------------VTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPN   77 (291)
T ss_pred             hhhcccCCCCCCCeEEEEEeecCCCeEEEE-------------EEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcC
Confidence            466678888899999999999999999999             7654 578999999865322222288899999998 8


Q ss_pred             CCccceeccceEeeCC-----eEEEEEEecCCCCCccccccC
Q 043820          223 ARSRPRSYPSVVIRPG-----YKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       223 H~nlv~l~~g~~~~~~-----~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      |+|+++++ +++...+     ..+ +|+||+++|+|.+++..
T Consensus        78 h~ni~~~~-~~~~~~~~~~~~~~~-lv~ey~~~~sL~~~~~~  117 (291)
T cd06639          78 HPNVVKFY-GMFYKADKLVGGQLW-LVLELCNGGSVTELVKG  117 (291)
T ss_pred             CCCeEEEE-EEEEeccccCCCeeE-EEEEECCCCcHHHHHHH
Confidence            99999999 9887543     356 99999999999998853

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=98.93  E-value=1.3e-09  Score=95.92  Aligned_cols=97  Identities=19%  Similarity=0.234  Sum_probs=78.1

Q ss_pred             cccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccceEee
Q 043820          159 SINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSVVIR  236 (282)
Q Consensus       159 ~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~~~~  236 (282)
                      +....||+|+||.||+             +... .+..+++|.+........+ |.+|+.++..++|+|++++. +.+..
T Consensus         8 ~i~~~lg~g~~g~v~~-------------~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~-~~~~~   73 (282)
T cd06643           8 EIIGELGDGAFGKVYK-------------AQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL-DAFYY   73 (282)
T ss_pred             HHHhhcccCCCeEEEE-------------EEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEE-EEEee
Confidence            4457899999999999             7655 4678899988654444445 99999999999999999999 99998


Q ss_pred             CCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          237 PGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       237 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      .+..+ +|+||+++|+|..++....  ..++|..+.
T Consensus        74 ~~~~~-~v~e~~~~~~l~~~~~~~~--~~l~~~~~~  106 (282)
T cd06643          74 ENNLW-ILIEFCAGGAVDAVMLELE--RPLTEPQIR  106 (282)
T ss_pred             CCEEE-EEEEecCCCcHHHHHHhcC--CCCCHHHHH
Confidence            88888 9999999999999876532  246665443

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=98.93  E-value=1.4e-09  Score=95.48  Aligned_cols=98  Identities=18%  Similarity=0.145  Sum_probs=75.5

Q ss_pred             cCccccceecccCccceeccccccccccccceeecCC-C----cEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARID-A----RVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPR  228 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~-~----~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~  228 (282)
                      .+|...+.||+|+||.||+             +...+ +    ..+|+|.+....... .. +.+|+..+..++|+|+++
T Consensus         7 ~~~~~~~~ig~g~~g~v~~-------------~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   73 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYK-------------GVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVR   73 (279)
T ss_pred             HHcEEcceecCCCCccEEE-------------EEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            3456668999999999999             66432 2    368999887554333 33 999999999999999999


Q ss_pred             eccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          229 SYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       229 l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      ++ |++.. ...+ +++||+++|+|.+++.....  .++|...
T Consensus        74 ~~-~~~~~-~~~~-~v~e~~~~g~L~~~l~~~~~--~~~~~~~  111 (279)
T cd05057          74 LL-GICLS-SQVQ-LITQLMPLGCLLDYVRNHKD--NIGSQYL  111 (279)
T ss_pred             EE-EEEec-CceE-EEEecCCCCcHHHHHHhccC--CCCHHHH
Confidence            99 99876 5666 99999999999999975432  3445433

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=98.93  E-value=2.2e-09  Score=93.55  Aligned_cols=88  Identities=22%  Similarity=0.219  Sum_probs=70.6

Q ss_pred             ccccceecccCccceeccccccccccccceeecCC----CcEEEEEEccCCCCc--hhH-HHHHHHHhhhCCCCccceec
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARID----ARVVAARIVFAGSVT--GIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~----~~~vAvK~l~~~~~~--~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      |.+.+.||+|+||.||+             +....    +..||+|.+......  ... +.+|+..+..++|+|+++++
T Consensus         1 ~~~~~~lg~G~~g~v~~-------------~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~   67 (273)
T cd05035           1 LKLGKILGEGEFGSVME-------------GQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLI   67 (273)
T ss_pred             CccccccCcCCCceEEE-------------EEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEE
Confidence            34568999999999999             76532    367999998754322  223 99999999999999999999


Q ss_pred             cceEeeCCe------EEEEEEecCCCCCccccccCC
Q 043820          231 PSVVIRPGY------KVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       231 ~g~~~~~~~------~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                       |.+...+.      .+ +++||+++|+|..++...
T Consensus        68 -~~~~~~~~~~~~~~~~-~v~e~~~~~~l~~~l~~~  101 (273)
T cd05035          68 -GVCFEASSLQKIPKPM-VILPFMKHGDLHSFLLYS  101 (273)
T ss_pred             -eeeccCCccccCcccE-EEEeccCCCCHHHHHHHh
Confidence             98876554      56 999999999999998653

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=98.93  E-value=2.5e-09  Score=94.97  Aligned_cols=89  Identities=10%  Similarity=0.056  Sum_probs=75.9

Q ss_pred             cCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      ++|...+.||+|+||.||+             +.. .++..||+|.+........+ +.+|+.++..++|+|++++. +.
T Consensus        19 ~~~~~~~~lg~g~~g~v~~-------------~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~-~~   84 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYT-------------AIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYL-DS   84 (293)
T ss_pred             hhceeeeEecCCCCeEEEE-------------EEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehh-he
Confidence            4567778999999999999             764 35788999998654444445 99999999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccC
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +..++..+ +|+||+++|+|.+++..
T Consensus        85 ~~~~~~~~-lv~e~~~~~~L~~~~~~  109 (293)
T cd06647          85 YLVGDELW-VVMEYLAGGSLTDVVTE  109 (293)
T ss_pred             eeeCCcEE-EEEecCCCCcHHHHHhh
Confidence            98888888 99999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=98.93  E-value=2.5e-09  Score=94.55  Aligned_cols=87  Identities=20%  Similarity=0.162  Sum_probs=72.4

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc---hhH-HHHHHHHhhhCCCCccceeccc
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT---GIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~---~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      |+..+.||+|+||.||+             +... .+..+|+|.+......   ... +..|+.++..++|+|++++. +
T Consensus         2 f~~~~~ig~G~~g~v~~-------------~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~-~   67 (285)
T cd05630           2 FRQYRVLGKGGFGEVCA-------------CQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLA-Y   67 (285)
T ss_pred             ceeeEEeecCCCeEEEE-------------EEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeee-E
Confidence            55568899999999999             6654 5789999988643221   223 78899999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      .+...+..+ +||||+++|+|.+++..
T Consensus        68 ~~~~~~~~~-lv~e~~~g~~L~~~l~~   93 (285)
T cd05630          68 AYETKDALC-LVLTLMNGGDLKFHIYH   93 (285)
T ss_pred             EEecCCEEE-EEEEecCCCcHHHHHHH
Confidence            998888888 99999999999998854

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=98.93  E-value=1.8e-09  Score=94.65  Aligned_cols=99  Identities=16%  Similarity=0.123  Sum_probs=77.6

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-----CCcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCcccee
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-----DARVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-----~~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      .|...+.||+|+||.||+             +...     .+..+|+|.+...... ..+ |.+|+.++..++|+||+++
T Consensus         5 ~~~~~~~ig~g~~~~v~~-------------~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~   71 (284)
T cd05038           5 HLKFIKQLGEGHFGKVEL-------------CRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKY   71 (284)
T ss_pred             hchhheeeccCCCeeEEE-------------eeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheE
Confidence            355558999999999999             6542     3678999998754443 344 9999999999999999999


Q ss_pred             ccceEee--CCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          230 YPSVVIR--PGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       230 ~~g~~~~--~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      . +++..  +...+ ++|||+++|+|.+++....  ..++|..++
T Consensus        72 ~-~~~~~~~~~~~~-lv~e~~~~~~l~~~l~~~~--~~~~~~~~~  112 (284)
T cd05038          72 K-GVCEKPGGRSLR-LIMEYLPSGSLRDYLQRHR--DQINLKRLL  112 (284)
T ss_pred             E-eeeecCCCCceE-EEEecCCCCCHHHHHHhCc--cccCHHHHH
Confidence            9 98876  44566 9999999999999997543  246666544

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=98.93  E-value=1e-09  Score=96.50  Aligned_cols=97  Identities=14%  Similarity=0.121  Sum_probs=77.8

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc--hhH-HHHHHHHhhhCCCCccceeccc
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT--GIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~--~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      +|+..+.||+|+||.||+             +... .+..+|+|.+......  ..+ +.+|+.++..++|+||++++ +
T Consensus         2 ~y~~~~~lg~g~~~~vy~-------------~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~-~   67 (286)
T cd07846           2 KYENLGLVGEGSYGMVMK-------------CKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLI-E   67 (286)
T ss_pred             ceeEeeeeccCCCeEEEE-------------EEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHH-H
Confidence            566779999999999999             7765 4789999988643222  234 89999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      ++..++..+ +|+||+++++|.+++....   .++|...
T Consensus        68 ~~~~~~~~~-lv~e~~~~~~l~~~~~~~~---~~~~~~~  102 (286)
T cd07846          68 VFRRKKRLY-LVFEFVDHTVLDDLEKYPN---GLDESRV  102 (286)
T ss_pred             hcccCCeEE-EEEecCCccHHHHHHhccC---CCCHHHH
Confidence            998888888 9999999999988765432   3555544

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=98.93  E-value=1e-09  Score=107.33  Aligned_cols=105  Identities=16%  Similarity=0.145  Sum_probs=83.5

Q ss_pred             HHHHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH--HHHHHHHhhhC-CCCcc
Q 043820          150 TIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF--FARSVTEVAKI-YARSR  226 (282)
Q Consensus       150 el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~--f~~e~~~l~~l-~H~nl  226 (282)
                      .++...+++...+.||+|.||.|+++...++...     .......||||+++......+.  +..|+.+|..+ .|+|+
T Consensus       290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~-----~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~ni  364 (609)
T KOG0200|consen  290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKA-----LLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNI  364 (609)
T ss_pred             ceeechhhccccceeecccccceEeEEEeecccc-----cccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcch
Confidence            4566666667778999999999999655544210     0112578999999876555443  99999999999 79999


Q ss_pred             ceeccceEeeCCeEEEEEEecCCCCCccccccCCC
Q 043820          227 PRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       227 v~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      +.++ |+|...+..+ +|+||++.|+|.+||+...
T Consensus       365 v~ll-G~~t~~~~~~-~v~Ey~~~G~L~~~Lr~~r  397 (609)
T KOG0200|consen  365 VNLL-GACTQDGPLY-VIVEYAEHGDLLEFLRKKR  397 (609)
T ss_pred             hhhe-eeeccCCceE-EEEEeccCCcHHHHHHhcc
Confidence            9999 9999988888 9999999999999998654

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=98.92  E-value=1.6e-09  Score=95.89  Aligned_cols=98  Identities=20%  Similarity=0.298  Sum_probs=79.2

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      +.|...++||+|+||.||+             +... .+..+++|.+........+ +.+|+.++..++|+|++++. +.
T Consensus        12 ~~y~i~~~lg~g~~g~vy~-------------~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~-~~   77 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYK-------------AKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLL-GA   77 (292)
T ss_pred             hhhhhhheecCCCCeEEEE-------------EEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeE-EE
Confidence            4567778999999999999             7654 4789999998765444445 99999999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCc
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPD  270 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~  270 (282)
                      +......+ +||||+++++|..++....  ..++|..
T Consensus        78 ~~~~~~~~-lv~e~~~~~~l~~~~~~~~--~~l~~~~  111 (292)
T cd06644          78 FYWDGKLW-IMIEFCPGGAVDAIMLELD--RGLTEPQ  111 (292)
T ss_pred             EEeCCeEE-EEEecCCCCcHHHHHHhhc--CCCCHHH
Confidence            88888777 9999999999988875433  2345543

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=98.92  E-value=5.9e-10  Score=97.21  Aligned_cols=84  Identities=18%  Similarity=0.176  Sum_probs=68.2

Q ss_pred             ccccceecccCccceeccccccccccccceeecCC-CcEEEEEEccCCCC-chh-H-HHHHHHHhhhCCCCccceeccce
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARID-ARVVAARIVFAGSV-TGI-F-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~-~~~vAvK~l~~~~~-~~~-~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      |+..-++|+|++|.|||             +...+ |+.||||++-.... ... + -++|+++|.++.|+|||.|+ .+
T Consensus         4 YE~LgkvGEGSYGvV~K-------------Crnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLi-EV   69 (396)
T KOG0593|consen    4 YEKLGKVGEGSYGVVMK-------------CRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLI-EV   69 (396)
T ss_pred             HhhhhccccCcceEEEE-------------eccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHH-HH
Confidence            44457899999999999             77654 89999999965433 222 3 89999999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCcccc
Q 043820          234 VIRPGYKVGLILELKPDPDPNPD  256 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~  256 (282)
                      +......+ ||+||+..--|++.
T Consensus        70 Frrkrklh-LVFE~~dhTvL~eL   91 (396)
T KOG0593|consen   70 FRRKRKLH-LVFEYCDHTVLHEL   91 (396)
T ss_pred             HHhcceeE-EEeeecchHHHHHH
Confidence            98888877 99999987555544

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=98.92  E-value=2.5e-09  Score=93.01  Aligned_cols=88  Identities=13%  Similarity=0.115  Sum_probs=73.6

Q ss_pred             CccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCC----c--hhH-HHHHHHHhhhCCCCccce
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSV----T--GIF-FARSVTEVAKIYARSRPR  228 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~----~--~~~-f~~e~~~l~~l~H~nlv~  228 (282)
                      +|+..+.||+|+||.||+             +.. .++..+|+|.+.....    +  ..+ +.+|+..++.++|+||++
T Consensus         1 ~~~~~~~lg~g~~~~v~~-------------~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~   67 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQ-------------ARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIR   67 (268)
T ss_pred             CccccceecCcCceEEEE-------------EEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceeh
Confidence            366678999999999999             664 4578999998864321    1  123 899999999999999999


Q ss_pred             eccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          229 SYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       229 l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ++ +.+.+++..+ +|+||+++++|.+++..
T Consensus        68 ~~-~~~~~~~~~~-~v~e~~~~~~L~~~l~~   96 (268)
T cd06630          68 ML-GATCEDSHFN-LFVEWMAGGSVSHLLSK   96 (268)
T ss_pred             hh-ceeccCCeEE-EEEeccCCCcHHHHHHH
Confidence            99 9998888888 99999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=98.92  E-value=1.9e-09  Score=94.65  Aligned_cols=98  Identities=15%  Similarity=0.112  Sum_probs=78.2

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC--chhH-HHHHHHHhhhCCCCccceeccc
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV--TGIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~--~~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      +|+....||+|+||.||+             +... ++..||+|.+.....  ...+ +.+|+.++..++|+|+++++ +
T Consensus         2 ~y~~~~~l~~g~~~~v~~-------------~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~-~   67 (286)
T cd07847           2 KYEKLSKIGEGSYGVVFK-------------CRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLI-E   67 (286)
T ss_pred             ceeeeeeecccCCeEEEE-------------EEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeee-e
Confidence            566678999999999999             7765 588999998864322  2234 89999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      .+..+...+ +||||++++.|..++....   .++|..+.
T Consensus        68 ~~~~~~~~~-~v~e~~~~~~l~~~~~~~~---~~~~~~~~  103 (286)
T cd07847          68 VFRRKRKLH-LVFEYCDHTVLNELEKNPR---GVPEHLIK  103 (286)
T ss_pred             EEeeCCEEE-EEEeccCccHHHHHHhCCC---CCCHHHHH
Confidence            998888888 9999999999988765432   35555443

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=98.91  E-value=3.7e-09  Score=91.41  Aligned_cols=88  Identities=13%  Similarity=0.059  Sum_probs=73.3

Q ss_pred             ccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCC--CchhH-HHHHHHHhhhCCCCccceeccce
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGS--VTGIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~--~~~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      |+..+.||+|+||.||.             ... .++..+++|.+....  ..... +.+|+.++++++|+||++++ ++
T Consensus         2 y~~~~~ig~g~~g~v~~-------------~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~-~~   67 (256)
T cd08221           2 YIPIRVLGKGAFGEATL-------------YRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYY-NH   67 (256)
T ss_pred             ceEeeEecccCCceEEE-------------EEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEE-eE
Confidence            56678999999999988             543 357899999876432  22233 99999999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccCC
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +.+.+..+ ++|||+++|+|.+++...
T Consensus        68 ~~~~~~~~-~~~e~~~~~~L~~~~~~~   93 (256)
T cd08221          68 FMDDNTLL-IEMEYANGGTLYDKIVRQ   93 (256)
T ss_pred             EecCCeEE-EEEEecCCCcHHHHHHhc
Confidence            99888888 999999999999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=98.91  E-value=2.5e-09  Score=94.65  Aligned_cols=89  Identities=17%  Similarity=0.179  Sum_probs=74.8

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC---chhH-HHHHHHHhhhCCCCccceecc
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV---TGIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~---~~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      +|+..+.||+|+||.||+             +... .+..+|+|.+.....   ...+ +.+|+.++.+++|+||++++ 
T Consensus         2 ~y~~~~~ig~g~~~~vy~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~-   67 (290)
T cd05580           2 DFEFIKTLGTGSFGRVML-------------VRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLY-   67 (290)
T ss_pred             ceEEEEEeecCCCeEEEE-------------EEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCcccee-
Confidence            567779999999999999             7654 578999999864321   1233 89999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +.+..++..+ +||||+++|+|.+++...
T Consensus        68 ~~~~~~~~~~-~v~e~~~~~~L~~~~~~~   95 (290)
T cd05580          68 GSFQDDSNLY-LVMEYVPGGELFSHLRKS   95 (290)
T ss_pred             eEEEcCCeEE-EEEecCCCCCHHHHHHHc
Confidence            9998888888 999999999999998654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=98.91  E-value=2.3e-09  Score=96.69  Aligned_cols=84  Identities=14%  Similarity=0.132  Sum_probs=69.2

Q ss_pred             ceecccCccceeccccccccccccceeec----CCCcEEEEEEccCCC----CchhH-HHHHHHHhhhCCCCccceeccc
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGAR----IDARVVAARIVFAGS----VTGIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~----~~~~~vAvK~l~~~~----~~~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      +.||+|+||.||+             +..    ..+..||+|.+....    ..... +.+|+.+|..++||||++++ +
T Consensus         2 ~~lg~G~~g~V~~-------------~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~-~   67 (323)
T cd05584           2 KVLGKGGYGKVFQ-------------VRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLI-Y   67 (323)
T ss_pred             ceeeecCCeEEEE-------------EEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhcee-e
Confidence            6799999999999             543    247899999986421    12223 78999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      .+..++..+ +||||+++|+|.+++...
T Consensus        68 ~~~~~~~~~-lv~e~~~~~~L~~~~~~~   94 (323)
T cd05584          68 AFQTGGKLY-LILEYLSGGELFMHLERE   94 (323)
T ss_pred             EEecCCeEE-EEEeCCCCchHHHHHHHc
Confidence            998888888 999999999999988643

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=98.91  E-value=2e-09  Score=93.89  Aligned_cols=101  Identities=16%  Similarity=0.239  Sum_probs=77.6

Q ss_pred             HhccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhHHHHHHHHhhhC-CCCccceec
Q 043820          153 NATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIFFARSVTEVAKI-YARSRPRSY  230 (282)
Q Consensus       153 ~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l-~H~nlv~l~  230 (282)
                      .+++.|+..+.||+|+||.||+             +... .+..||+|.+.........+..|+.++..+ +|+|++++.
T Consensus         3 ~~~~~y~~~~~lg~g~~g~vy~-------------~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~   69 (272)
T cd06637           3 DPAGIFELVELVGNGTYGQVYK-------------GRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYY   69 (272)
T ss_pred             ChhhhhhHHHheeecCCeEEEE-------------EEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEe
Confidence            4566788889999999999999             7654 578899999865432222288999999998 799999999


Q ss_pred             cceEeeC------CeEEEEEEecCCCCCccccccCCCCCcCCCCC
Q 043820          231 PSVVIRP------GYKVGLILELKPDPDPNPDRLHSSRVRSLQYP  269 (282)
Q Consensus       231 ~g~~~~~------~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~  269 (282)
                       |.+...      ...+ ++|||+++|+|.+++.... ...++|.
T Consensus        70 -~~~~~~~~~~~~~~~~-iv~e~~~~~~L~~~l~~~~-~~~l~~~  111 (272)
T cd06637          70 -GAFIKKNPPGMDDQLW-LVMEFCGAGSVTDLIKNTK-GNTLKEE  111 (272)
T ss_pred             -eEEeecCCCCCCcEEE-EEEEcCCCCcHHHHHHhcc-CCCCCHH
Confidence             988753      2345 9999999999999987533 1235544

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=98.91  E-value=2.5e-09  Score=94.57  Aligned_cols=105  Identities=19%  Similarity=0.179  Sum_probs=76.4

Q ss_pred             ccCccccceecccCccceeccccccccccc----cceeecCCCcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCccce
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAG----TITGARIDARVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPR  228 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~----~~~g~~~~~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~  228 (282)
                      ..+|...+.||+|+||.||++.........    ........+..||+|.+...... ..+ |.+|+.++.+++|+|+++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   83 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR   83 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence            345777799999999999994333221000    00000112457899998754333 334 999999999999999999


Q ss_pred             eccceEeeCCeEEEEEEecCCCCCccccccCCC
Q 043820          229 SYPSVVIRPGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       229 l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      ++ +++...+..+ +++||+++++|.++|....
T Consensus        84 ~~-~~~~~~~~~~-lv~e~~~~~~L~~~l~~~~  114 (296)
T cd05051          84 LL-GVCTVDPPLC-MIMEYMENGDLNQFLQKHV  114 (296)
T ss_pred             EE-EEEecCCCcE-EEEecCCCCCHHHHHHhcc
Confidence            99 9998888888 9999999999999987543

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=98.91  E-value=3.2e-09  Score=94.85  Aligned_cols=89  Identities=19%  Similarity=0.202  Sum_probs=73.2

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCccceeccc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      ++|...+.||+|+||.||+             +... .+..||+|.+....... .. +.+|+.++.+++|+||++++ +
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~-~   71 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFK-------------GRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLH-D   71 (309)
T ss_pred             CceEEEEEecccCCEEEEE-------------EEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEE-E
Confidence            4577779999999999999             7654 57889999987543322 33 88999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ++...+..+ +||||+++ +|.+++...
T Consensus        72 ~~~~~~~~~-lv~e~~~~-~l~~~~~~~   97 (309)
T cd07872          72 IVHTDKSLT-LVFEYLDK-DLKQYMDDC   97 (309)
T ss_pred             EEeeCCeEE-EEEeCCCC-CHHHHHHhc
Confidence            998888888 99999985 888887543

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=98.91  E-value=2.2e-09  Score=93.43  Aligned_cols=101  Identities=21%  Similarity=0.255  Sum_probs=79.0

Q ss_pred             cCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCC---chhH-HHHHHHHhhhCCCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSV---TGIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~---~~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ++|+..+.||+|+||.||+             +.. .++..+|+|.+.....   .... |.+|+.++..++|+||++++
T Consensus         2 ~~y~~~~~ig~g~~g~v~~-------------~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~   68 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYR-------------ATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYY   68 (267)
T ss_pred             chhhhhhhhcccCCeEEEE-------------EeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhh
Confidence            3566778999999999999             764 4688999998764322   1223 89999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCCCC-CcCCCCCcc
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHSSR-VRSLQYPDP  271 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-~~~l~W~~R  271 (282)
                       +++..++..+ ++|||+++++|.+++..... ...++|.+.
T Consensus        69 -~~~~~~~~~~-~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~  108 (267)
T cd08229          69 -ASFIEDNELN-IVLELADAGDLSRMIKHFKKQKRLIPEKTV  108 (267)
T ss_pred             -heeEeCCeEE-EEEEecCCCCHHHHHHHhhccCCCCCHHHH
Confidence             9999888888 99999999999998863221 234555543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=98.91  E-value=2.4e-09  Score=96.82  Aligned_cols=84  Identities=12%  Similarity=0.037  Sum_probs=69.0

Q ss_pred             ceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC---chhH-HHHHHHHhhhC-CCCccceeccceEe
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV---TGIF-FARSVTEVAKI-YARSRPRSYPSVVI  235 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~---~~~~-f~~e~~~l~~l-~H~nlv~l~~g~~~  235 (282)
                      +.||+|+||.||+             +... ++..||+|.++....   .... +.+|..++..+ +||||+++. +++.
T Consensus         1 ~~lG~G~~g~V~~-------------~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~-~~~~   66 (329)
T cd05588           1 RVIGRGSYAKVLL-------------VELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLH-SCFQ   66 (329)
T ss_pred             CeEeeCCCeEEEE-------------EEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceE-EEEE
Confidence            4689999999999             7654 578999999975322   2223 88999999888 799999999 9988


Q ss_pred             eCCeEEEEEEecCCCCCccccccCC
Q 043820          236 RPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       236 ~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ..+..+ +||||+++|+|.+++...
T Consensus        67 ~~~~~~-lv~e~~~~g~L~~~~~~~   90 (329)
T cd05588          67 TESRLF-FVIEFVSGGDLMFHMQRQ   90 (329)
T ss_pred             cCCEEE-EEEeCCCCCCHHHHHHHc
Confidence            888888 999999999999887543

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=98.91  E-value=3.8e-09  Score=93.34  Aligned_cols=87  Identities=13%  Similarity=0.034  Sum_probs=71.2

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCccceeccce
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      +|...+.||.|++|.||+             +... .+..+|+|.+...... ... +.+|+.+++.++|+||++++ |+
T Consensus         2 ~~~~~~~lg~g~~~~v~~-------------~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~-~~   67 (287)
T cd06621           2 KIVELSRLGEGAGGSVTK-------------CRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYY-GA   67 (287)
T ss_pred             ceEEEEEeccCCceEEEE-------------EEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeee-eE
Confidence            567778999999999999             7764 5789999998754332 334 99999999999999999999 98


Q ss_pred             EeeCC--eEEEEEEecCCCCCcccccc
Q 043820          234 VIRPG--YKVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       234 ~~~~~--~~~~lv~Ey~~~GsL~~~l~  258 (282)
                      +....  ..+ +||||+++++|.+++.
T Consensus        68 ~~~~~~~~~~-lv~e~~~~~~L~~~l~   93 (287)
T cd06621          68 FLDESSSSIG-IAMEYCEGGSLDSIYK   93 (287)
T ss_pred             EEccCCCeEE-EEEEecCCCCHHHHHH
Confidence            86533  455 9999999999988764

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=98.91  E-value=2.2e-09  Score=92.76  Aligned_cols=88  Identities=11%  Similarity=0.085  Sum_probs=73.4

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC--CchhH-HHHHHHHhhhCCCCccceeccce
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS--VTGIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~--~~~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      |+..+.||+|+||.+|+             +... ++..+|+|.+....  ....+ +.+|+.++++++|+||+++. ++
T Consensus         2 y~~~~~lg~g~~g~~~~-------------~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~-~~   67 (256)
T cd08218           2 YVKVKKIGEGSFGKAIL-------------VKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQ-ES   67 (256)
T ss_pred             ceEEEEeccCCceEEEE-------------EEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeE-ee
Confidence            56679999999999999             6543 57899999986432  22233 99999999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccCC
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +...+..+ +|+||+++++|.+++...
T Consensus        68 ~~~~~~~~-lv~e~~~~~~l~~~~~~~   93 (256)
T cd08218          68 FEENGNLY-IVMDYCEGGDLYKKINAQ   93 (256)
T ss_pred             ecCCCeEE-EEEecCCCCcHHHHHHhc
Confidence            88888888 999999999999988653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=98.91  E-value=2e-09  Score=93.76  Aligned_cols=89  Identities=11%  Similarity=0.201  Sum_probs=75.1

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      ++|...+.||+|+||.||+             +... ++..||+|.++........ +.+|+.++..++|+||++++ +.
T Consensus         9 ~~~~~~~~lg~g~~~~v~~-------------~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~-~~   74 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYK-------------ARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYF-GS   74 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEE-------------EEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEE-EE
Confidence            4566678999999999999             7644 5789999998654433444 88999999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccC
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +...+..+ +++||+++|+|.+++..
T Consensus        75 ~~~~~~~~-lv~e~~~~~~L~~~~~~   99 (267)
T cd06645          75 YLRRDKLW-ICMEFCGGGSLQDIYHV   99 (267)
T ss_pred             EEeCCEEE-EEEeccCCCcHHHHHHh
Confidence            98888888 99999999999998754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=98.90  E-value=1.7e-09  Score=95.24  Aligned_cols=92  Identities=16%  Similarity=0.111  Sum_probs=72.2

Q ss_pred             ecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC---chhH-HHHHHHHhhhCCCCccceeccceEeeCC
Q 043820          164 LGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV---TGIF-FARSVTEVAKIYARSRPRSYPSVVIRPG  238 (282)
Q Consensus       164 lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~---~~~~-f~~e~~~l~~l~H~nlv~l~~g~~~~~~  238 (282)
                      ||+|+||.||+             +... ++..+|+|.+.....   .... +..|+.++.+++|+||+++. +.+..+.
T Consensus         1 lg~G~~g~Vy~-------------~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~-~~~~~~~   66 (277)
T cd05607           1 LGKGGFGEVCA-------------VQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLA-YAFESKT   66 (277)
T ss_pred             CCCCCceEEEE-------------EEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEE-EEEecCC
Confidence            69999999999             7654 588999999864221   2233 67799999999999999999 8888888


Q ss_pred             eEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          239 YKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       239 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      ..+ +||||+++|+|.+++.... ...++|...
T Consensus        67 ~~~-lv~e~~~g~~L~~~~~~~~-~~~~~~~~~   97 (277)
T cd05607          67 HLC-LVMSLMNGGDLKYHIYNVG-ERGLEMERV   97 (277)
T ss_pred             eEE-EEEecCCCCCHHHHHHhcc-ccCCCHHHH
Confidence            877 9999999999998886433 223566544

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=98.90  E-value=1.6e-10  Score=108.06  Aligned_cols=103  Identities=16%  Similarity=0.082  Sum_probs=81.0

Q ss_pred             CCCCccCHHHHHHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhHHHHHHHHhhh
Q 043820          141 LELPLFELATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIFFARSVTEVAK  220 (282)
Q Consensus       141 ~~~~~~~~~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~f~~e~~~l~~  220 (282)
                      .+...+.|++|.       ..+-||.|+-|.||.             |.+. +..||||+++..      -..+++.|++
T Consensus       116 ~e~WeiPFe~Is-------ELeWlGSGaQGAVF~-------------Grl~-netVAVKKV~el------kETdIKHLRk  168 (904)
T KOG4721|consen  116 EELWEIPFEEIS-------ELEWLGSGAQGAVFL-------------GRLH-NETVAVKKVREL------KETDIKHLRK  168 (904)
T ss_pred             hhhccCCHHHhh-------hhhhhccCcccceee-------------eecc-CceehhHHHhhh------hhhhHHHHHh
Confidence            344555566553       337899999999999             8884 589999988643      3457788999


Q ss_pred             CCCCccceeccceEeeCCeEEEEEEecCCCCCccccccCCCC---CcCCCCCccc
Q 043820          221 IYARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSR---VRSLQYPDPA  272 (282)
Q Consensus       221 l~H~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~---~~~l~W~~R~  272 (282)
                      |+|+||+.+. |+|...+... |||||++.|-|..+|...+.   ....+|.+-+
T Consensus       169 LkH~NII~Fk-GVCtqsPcyC-IiMEfCa~GqL~~VLka~~~itp~llv~Wsk~I  221 (904)
T KOG4721|consen  169 LKHPNIITFK-GVCTQSPCYC-IIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGI  221 (904)
T ss_pred             ccCcceeeEe-eeecCCceeE-EeeeccccccHHHHHhccCccCHHHHHHHHHHh
Confidence            9999999999 9998877777 99999999999999987553   2345887643

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=98.90  E-value=2.5e-09  Score=92.61  Aligned_cols=98  Identities=12%  Similarity=0.105  Sum_probs=76.1

Q ss_pred             cCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccceE
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSVV  234 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~~  234 (282)
                      ++|...+.||+|+||.||+             +.. .+..+|+|.+...  ...+ |.+|+.++..++|+|++++. |++
T Consensus         6 ~~~~~~~~lg~g~~~~v~~-------------~~~-~~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~-~~~   68 (256)
T cd05082           6 KELKLLQTIGKGEFGDVML-------------GDY-RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLL-GVI   68 (256)
T ss_pred             HhCeeeeeecccCCCeEEE-------------EEE-cCCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEE-EEE
Confidence            3566779999999999999             765 3678999988543  2234 99999999999999999999 987


Q ss_pred             eeCC-eEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          235 IRPG-YKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       235 ~~~~-~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      ...+ ..+ +++||+++|+|.+++.... ...++|...+
T Consensus        69 ~~~~~~~~-lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~  105 (256)
T cd05082          69 VEEKGGLY-IVTEYMAKGSLVDYLRSRG-RSVLGGDCLL  105 (256)
T ss_pred             EcCCCceE-EEEECCCCCcHHHHHHhcC-CCCCCHHHHH
Confidence            6554 455 9999999999999987543 2235665443

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=98.90  E-value=2.6e-09  Score=94.05  Aligned_cols=100  Identities=16%  Similarity=0.126  Sum_probs=73.5

Q ss_pred             cccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCccceeccceEee
Q 043820          159 SINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPRSYPSVVIR  236 (282)
Q Consensus       159 ~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~l~~g~~~~  236 (282)
                      ...+.||+|+||.||.+....        ....++..||+|.+...... ... |.+|+.++.+++|+||+++. +++..
T Consensus         7 ~~~~~lg~g~~g~v~~~~~~~--------~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~-~~~~~   77 (283)
T cd05080           7 KKIRVLGEGHFGKVSLYCYDP--------ANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYK-GCCSE   77 (283)
T ss_pred             eeceecccCCCcEEEEeeEcc--------ccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEE-EEEec
Confidence            556899999999997721110        11235788999998754332 334 99999999999999999999 98765


Q ss_pred             CC--eEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          237 PG--YKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       237 ~~--~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      .+  ..+ ++|||+++|+|.+++...    .++|..+.
T Consensus        78 ~~~~~~~-lv~e~~~~~~l~~~~~~~----~l~~~~~~  110 (283)
T cd05080          78 QGGKGLQ-LIMEYVPLGSLRDYLPKH----KLNLAQLL  110 (283)
T ss_pred             CCCceEE-EEecCCCCCCHHHHHHHc----CCCHHHHH
Confidence            43  355 999999999999998643    25665543

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=98.90  E-value=3.6e-09  Score=94.36  Aligned_cols=90  Identities=10%  Similarity=0.046  Sum_probs=74.9

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC---chhH-HHHHHHHhhhCCCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV---TGIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~---~~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ++|...+.||+|+||.||+             +... .+..|++|.+.....   .... +.+|+.++..++|+||++++
T Consensus         1 ~~y~~~~~l~~g~~~~v~~-------------~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~   67 (305)
T cd05609           1 EDFETIKLISNGAYGAVYL-------------VRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMF   67 (305)
T ss_pred             CCceEeeEeecCCCeeEEE-------------EEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeE
Confidence            3577779999999999999             6654 478999999875432   1223 88999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                       +.+..++..+ +||||+++|+|.+++...
T Consensus        68 -~~~~~~~~~~-lv~e~~~g~~L~~~l~~~   95 (305)
T cd05609          68 -CSFETKRHLC-MVMEYVEGGDCATLLKNI   95 (305)
T ss_pred             -EEEecCCEEE-EEEecCCCCcHHHHHHHc
Confidence             9988888888 999999999999998643

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=98.90  E-value=2.6e-09  Score=96.34  Aligned_cols=84  Identities=12%  Similarity=0.004  Sum_probs=69.2

Q ss_pred             ceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCC---CchhH-HHHHHHHhhhCCCCccceeccceEee
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGS---VTGIF-FARSVTEVAKIYARSRPRSYPSVVIR  236 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~H~nlv~l~~g~~~~  236 (282)
                      +.||+|+||.||+             +.. ..+..||+|.+....   ..... +..|+.++..++|+||+++. +.+..
T Consensus         1 ~~lG~G~~g~V~~-------------~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~-~~~~~   66 (325)
T cd05594           1 KLLGKGTFGKVIL-------------VKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK-YSFQT   66 (325)
T ss_pred             CeeeeCCCEEEEE-------------EEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceE-EEEEc
Confidence            3689999999999             654 358899999987532   12223 88999999999999999999 88888


Q ss_pred             CCeEEEEEEecCCCCCccccccCC
Q 043820          237 PGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       237 ~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      .+..+ +||||+++|+|..++...
T Consensus        67 ~~~~~-lv~E~~~~~~L~~~l~~~   89 (325)
T cd05594          67 HDRLC-FVMEYANGGELFFHLSRE   89 (325)
T ss_pred             CCEEE-EEEeCCCCCcHHHHHHhc
Confidence            88888 999999999999888643

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.90  E-value=4.6e-09  Score=91.09  Aligned_cols=89  Identities=16%  Similarity=0.213  Sum_probs=74.4

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc-----hhH-HHHHHHHhhhCCCCccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT-----GIF-FARSVTEVAKIYARSRPR  228 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~-----~~~-f~~e~~~l~~l~H~nlv~  228 (282)
                      ++|...+.||+|+||.||.             +... .+..+|+|.+......     ... +.+|+.++.+++|+||++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~-------------~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   68 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYL-------------CYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQ   68 (263)
T ss_pred             CcccccceecCCCceEEEE-------------EEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeee
Confidence            4688889999999999999             7654 5789999988643211     123 889999999999999999


Q ss_pred             eccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          229 SYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       229 l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +. |++...+..+ +++||+++++|.+++..
T Consensus        69 ~~-~~~~~~~~~~-~v~e~~~~~~l~~~~~~   97 (263)
T cd06625          69 YY-GCLRDDETLS-IFMEYMPGGSVKDQLKA   97 (263)
T ss_pred             eE-EEEccCCeEE-EEEEECCCCcHHHHHHH
Confidence            99 9998888777 99999999999988754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=98.89  E-value=5.3e-09  Score=90.44  Aligned_cols=87  Identities=13%  Similarity=0.096  Sum_probs=72.6

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCccceeccceE
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPRSYPSVV  234 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~l~~g~~  234 (282)
                      |...+.||+|+||.||+             +... .+..+|+|.++..... ..+ +.+|+.++..++|+|++++. +.+
T Consensus         2 y~~~~~lg~g~~g~v~~-------------~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~-~~~   67 (255)
T cd08219           2 YNVLRVVGEGSFGRALL-------------VQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFK-ESF   67 (255)
T ss_pred             ceEEEEeeccCCeEEEE-------------EEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEE-EEE
Confidence            55668999999999999             6544 5789999988643322 234 88999999999999999999 998


Q ss_pred             eeCCeEEEEEEecCCCCCccccccC
Q 043820          235 IRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       235 ~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ...+..+ ++|||+++|+|.+++..
T Consensus        68 ~~~~~~~-lv~e~~~~~~l~~~~~~   91 (255)
T cd08219          68 EADGHLY-IVMEYCDGGDLMQKIKL   91 (255)
T ss_pred             EECCEEE-EEEeeCCCCcHHHHHHh
Confidence            8888888 99999999999998864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=98.89  E-value=3.3e-09  Score=94.69  Aligned_cols=99  Identities=16%  Similarity=0.173  Sum_probs=74.7

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCc-hhH-HHHHHHHhhhC-CCCccceecc
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVT-GIF-FARSVTEVAKI-YARSRPRSYP  231 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l-~H~nlv~l~~  231 (282)
                      .++|...+.||+|+||.||++...+...     ........+|+|.+...... ... +..|+.++..+ +|+||+++. 
T Consensus        17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~-----~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~-   90 (307)
T cd05098          17 RDRLVLGKPLGEGCFGQVVMAEAIGLDK-----EKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLL-   90 (307)
T ss_pred             hHHeEEeeeeccCCCeeEEEeEEeccCC-----cccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEE-
Confidence            3567888999999999999932211100     00112357999999754322 233 88899999999 899999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +++...+..+ +||||+++|+|.++|...
T Consensus        91 ~~~~~~~~~~-lv~e~~~~~~L~~~i~~~  118 (307)
T cd05098          91 GACTQDGPLY-VIVEYASKGNLREYLRAR  118 (307)
T ss_pred             EEEecCCceE-EEEecCCCCcHHHHHHhc
Confidence            9998888888 999999999999999753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=98.89  E-value=2.8e-09  Score=95.59  Aligned_cols=99  Identities=18%  Similarity=0.187  Sum_probs=73.8

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCch-hH-HHHHHHHhhhC-CCCccceecc
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTG-IF-FARSVTEVAKI-YARSRPRSYP  231 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l-~H~nlv~l~~  231 (282)
                      .++|...+.||+|+||.||++...+...     ........+|+|.+....... .. +..|+.++..+ +|+||++++ 
T Consensus        11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~-----~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~-   84 (314)
T cd05099          11 RDRLVLGKPLGEGCFGQVVRAEAYGIDK-----SRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLL-   84 (314)
T ss_pred             HHHeeeeeeecCCCcccEEEeeecccCC-----ccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEE-
Confidence            3456777999999999999932111100     001124678999987543322 23 88999999999 699999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +++......+ ++|||+++|+|.++|...
T Consensus        85 ~~~~~~~~~~-lv~e~~~~g~L~~~i~~~  112 (314)
T cd05099          85 GVCTQEGPLY-VIVEYAAKGNLREFLRAR  112 (314)
T ss_pred             EEEccCCceE-EEEecCCCCcHHHHHHhc
Confidence            9998888777 999999999999999653

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=98.89  E-value=2.6e-09  Score=94.14  Aligned_cols=102  Identities=14%  Similarity=0.105  Sum_probs=84.6

Q ss_pred             HhccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceec
Q 043820          153 NATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       153 ~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ..+++|...+.||+|+||.||+             +... ++..+++|.+..... ..+ +.+|+..+..++|+|+++++
T Consensus        16 ~~~~~~~~~~~l~~g~~~~v~~-------------~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~   81 (286)
T cd06614          16 DPRELYKNLEKIGEGASGEVYK-------------ATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYY   81 (286)
T ss_pred             CccccchHhHhccCCCCeEEEE-------------EEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEE
Confidence            4566777779999999999999             7765 578999999875443 344 99999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                       +.+...+..+ +++||+++++|.+++....  ..++|..+.
T Consensus        82 -~~~~~~~~~~-lv~e~~~~~~L~~~l~~~~--~~l~~~~~~  119 (286)
T cd06614          82 -DSYLVGDELW-VVMEYMDGGSLTDIITQNF--VRMNEPQIA  119 (286)
T ss_pred             -EEEEECCEEE-EEEeccCCCcHHHHHHHhc--cCCCHHHHH
Confidence             9999888888 9999999999999997643  246666554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=98.89  E-value=4.5e-09  Score=91.09  Aligned_cols=88  Identities=17%  Similarity=0.236  Sum_probs=74.9

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc--hhH-HHHHHHHhhhCCCCccceeccce
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT--GIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~--~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      |...+.||+|+||.||+             +... ++..+++|.+......  ..+ +.+|+.++..++|+||++++ |.
T Consensus         2 y~~~~~lg~G~~~~v~~-------------~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~-~~   67 (264)
T cd06626           2 WQRGNKIGGGTFGKVYT-------------AVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYY-GV   67 (264)
T ss_pred             ceeeeEeecCCCcEEEE-------------EEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhhee-ee
Confidence            55668999999999999             7654 5789999998755443  334 99999999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccCC
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +...+..+ +|+||+++++|.+++...
T Consensus        68 ~~~~~~~~-lv~e~~~~~~L~~~~~~~   93 (264)
T cd06626          68 EVHREKVY-IFMEYCSGGTLEELLEHG   93 (264)
T ss_pred             EecCCEEE-EEEecCCCCcHHHHHhhc
Confidence            88888888 999999999999998754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=98.89  E-value=5.5e-09  Score=90.45  Aligned_cols=90  Identities=14%  Similarity=0.142  Sum_probs=76.8

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC-chhH-HHHHHHHhhhCCCCccceeccc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV-TGIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~-~~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      ++|...+.||+|++|.||+             +... .+..+++|.+..... .... +.+|+..+.+++|+|++++. +
T Consensus         1 ~~~~~~~~i~~g~~~~v~~-------------~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~-~   66 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYK-------------VRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCY-G   66 (264)
T ss_pred             CcceeeeeeeecCCeEEEE-------------EEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEE-E
Confidence            3577779999999999999             7665 488999999876543 2334 99999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      .+..++..+ +++||+++++|.+++...
T Consensus        67 ~~~~~~~~~-lv~e~~~~~~L~~~l~~~   93 (264)
T cd06623          67 AFYKEGEIS-IVLEYMDGGSLADLLKKV   93 (264)
T ss_pred             EEccCCeEE-EEEEecCCCcHHHHHHHc
Confidence            998888888 999999999999998653

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=98.89  E-value=3.3e-09  Score=94.25  Aligned_cols=90  Identities=17%  Similarity=0.193  Sum_probs=73.1

Q ss_pred             cCccccceecccCccceeccccccccccccceeecCC-C--cEEEEEEccCCCC-chhH-HHHHHHHhhhC-CCCcccee
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARID-A--RVVAARIVFAGSV-TGIF-FARSVTEVAKI-YARSRPRS  229 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~-~--~~vAvK~l~~~~~-~~~~-f~~e~~~l~~l-~H~nlv~l  229 (282)
                      ++|+..+.||+|+||.||+             +...+ +  ..+++|.++.... ...+ |.+|+.++.++ +||||+++
T Consensus         2 ~~~~~~~~lg~g~~g~v~~-------------~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~   68 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIR-------------AMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINL   68 (297)
T ss_pred             ccceeeeeecCCCcceEEE-------------EEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhhe
Confidence            4577779999999999999             76543 3  3578888874332 2334 99999999999 79999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      . +++...+..+ +++||+++|+|.+++...
T Consensus        69 ~-~~~~~~~~~~-lv~e~~~~~~L~~~l~~~   97 (297)
T cd05089          69 L-GACENRGYLY-IAIEYAPYGNLLDFLRKS   97 (297)
T ss_pred             E-EEEccCCcce-EEEEecCCCcHHHHHHhc
Confidence            9 9988888778 999999999999999653

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=98.89  E-value=3.1e-09  Score=94.14  Aligned_cols=96  Identities=22%  Similarity=0.226  Sum_probs=77.3

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc-----hhH-HHHHHHHhhhCCCCccceec
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT-----GIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~-----~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      |...+.||+|+||.||+             |... ++..||+|.+......     ... +..|+.++..++|+||++++
T Consensus         2 y~~~~~lg~g~~~~vy~-------------~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~   68 (298)
T cd07841           2 YEKGKKLGEGTYAVVYK-------------ARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLL   68 (298)
T ss_pred             ceeeeeeeeccccEEEE-------------EEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhh
Confidence            55668999999999999             8754 5889999998754332     223 78899999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                       +++.+.+..+ +||||+ +|+|.+++....  ..++|...
T Consensus        69 -~~~~~~~~~~-lv~e~~-~~~L~~~i~~~~--~~~~~~~~  104 (298)
T cd07841          69 -DVFGHKSNIN-LVFEFM-ETDLEKVIKDKS--IVLTPADI  104 (298)
T ss_pred             -heeecCCEEE-EEEccc-CCCHHHHHhccC--CCCCHHHH
Confidence             9999888888 999999 999999996543  24566544

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=98.89  E-value=1.3e-09  Score=98.39  Aligned_cols=91  Identities=19%  Similarity=0.222  Sum_probs=75.1

Q ss_pred             CccccceecccCccceeccccccccccccceeecCC-CcEEEEEEccCCCCchhH----HHHHHHHhhhCCCCccceecc
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARID-ARVVAARIVFAGSVTGIF----FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~-~~~vAvK~l~~~~~~~~~----f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      .|...+.||.|.-|+||.             +.+.+ +...|+|.+.+......+    ...|-++|+.++||-|+.|+ 
T Consensus        78 ~f~llk~LG~GdiG~VyL-------------~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLY-  143 (459)
T KOG0610|consen   78 HFRLLKRLGCGDIGTVYL-------------VELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLY-  143 (459)
T ss_pred             HHHHHHHcCCCCceeEEE-------------EEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhh-
Confidence            345558999999999999             77764 589999999875443322    77899999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccCCCC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLHSSR  262 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~  262 (282)
                      +........+ |+||||+||+|...++.+..
T Consensus       144 a~fet~~~~c-l~meyCpGGdL~~LrqkQp~  173 (459)
T KOG0610|consen  144 ASFETDKYSC-LVMEYCPGGDLHSLRQKQPG  173 (459)
T ss_pred             heeeccceeE-EEEecCCCccHHHHHhhCCC
Confidence            8887777777 99999999999998876553

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=98.88  E-value=4.5e-09  Score=92.00  Aligned_cols=89  Identities=17%  Similarity=0.204  Sum_probs=74.7

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCccceeccce
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      +|+..+.||.|+||.||+             +... ++..||+|.+...... ... +.+|+.+++.++|+|++++. +.
T Consensus         2 ~y~~~~~lg~g~~~~v~~-------------~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~-~~   67 (274)
T cd06609           2 LFTLLECIGKGSFGEVYK-------------AIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYY-GS   67 (274)
T ss_pred             hhhhhhhhcCCCCeEEEE-------------EEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeee-EE
Confidence            456668999999999999             7654 5789999998654322 233 89999999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccCC
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +.++...+ +|+||+++++|.+++...
T Consensus        68 ~~~~~~~~-~v~e~~~~~~L~~~~~~~   93 (274)
T cd06609          68 FLKGSKLW-IIMEYCGGGSCLDLLKPG   93 (274)
T ss_pred             EEECCeEE-EEEEeeCCCcHHHHHhhc
Confidence            98888888 999999999999998653

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=98.88  E-value=3.2e-09  Score=94.61  Aligned_cols=99  Identities=18%  Similarity=0.207  Sum_probs=74.6

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCc-hhH-HHHHHHHhhhC-CCCccceecc
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVT-GIF-FARSVTEVAKI-YARSRPRSYP  231 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l-~H~nlv~l~~  231 (282)
                      .++|...+.||+|+||.||++...+...     ....++..||+|.+...... ... +.+|+.++..+ +|+||++++ 
T Consensus        14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~-----~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~-   87 (304)
T cd05101          14 RDKLTLGKPLGEGCFGQVVMAEALGIDK-----DKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLL-   87 (304)
T ss_pred             HHHeeecceeeccCCceEEEEEEeccCC-----CCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchhee-
Confidence            4456777999999999999832111100     00123468999998654322 233 99999999999 899999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +.+......+ ++|||+++|+|.++|...
T Consensus        88 ~~~~~~~~~~-lv~e~~~~~~L~~~l~~~  115 (304)
T cd05101          88 GACTQDGPLY-VIVEYASKGNLREYLRAR  115 (304)
T ss_pred             EEEecCCceE-EEEecCCCCcHHHHHHhc
Confidence            9998888888 999999999999999754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=98.88  E-value=2.3e-09  Score=93.67  Aligned_cols=99  Identities=17%  Similarity=0.217  Sum_probs=76.2

Q ss_pred             cCccccceecccCccceeccccccccccccceeecCC----CcEEEEEEccCCCC-chhH-HHHHHHHhhhCCCCcccee
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARID----ARVVAARIVFAGSV-TGIF-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~----~~~vAvK~l~~~~~-~~~~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      ++|...+.||+|+||.||+             |...+    ...||+|....... ...+ |.+|+.++..++|+|++++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~-------------~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~   72 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQ-------------GVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKL   72 (270)
T ss_pred             hhceeeeeeCCccceeEEE-------------EEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhce
Confidence            3466779999999999999             65432    35789998865442 2334 9999999999999999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      + +++.. +..+ +||||+++|+|.+++....  ..++|..++
T Consensus        73 ~-~~~~~-~~~~-lv~e~~~~~~L~~~l~~~~--~~~~~~~~~  110 (270)
T cd05056          73 I-GVITE-NPVW-IVMELAPLGELRSYLQVNK--YSLDLASLI  110 (270)
T ss_pred             e-EEEcC-CCcE-EEEEcCCCCcHHHHHHhCC--CCCCHHHHH
Confidence            9 98764 4566 9999999999999996533  246666554

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=98.88  E-value=5.3e-09  Score=90.23  Aligned_cols=89  Identities=12%  Similarity=0.147  Sum_probs=73.8

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC--chhH-HHHHHHHhhhCCCCccceeccc
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV--TGIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~--~~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      +|...+.||+|+||.||+             +... .+..+|+|.+.....  ...+ +.+|+.+++.++|+|+++++ +
T Consensus         1 ~y~~~~~lg~g~~~~v~~-------------~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~-~   66 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHL-------------CRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYY-E   66 (256)
T ss_pred             CceEEEEecccCceEEEE-------------EEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhhee-e
Confidence            356678999999999999             6543 578999999865322  2233 99999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      .....+..+ +||||+++++|.+++...
T Consensus        67 ~~~~~~~~~-lv~e~~~~~~L~~~~~~~   93 (256)
T cd08220          67 NFLEDKALM-IVMEYAPGGTLAEYIQKR   93 (256)
T ss_pred             eEecCCEEE-EEEecCCCCCHHHHHHHh
Confidence            888787777 999999999999999753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=98.88  E-value=2.4e-09  Score=92.73  Aligned_cols=89  Identities=11%  Similarity=0.108  Sum_probs=74.8

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC---chhH-HHHHHHHhhhCCCCccceecc
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV---TGIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~---~~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      +|...+.||+|+||.||+             +... .+..+|+|.+.....   ...+ +.+|+..+.+++||||+++. 
T Consensus         1 ~y~~~~~i~~g~~~~v~~-------------~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~-   66 (258)
T cd05578           1 HFELLRVIGKGAFGKVCI-------------VQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLW-   66 (258)
T ss_pred             CceEEEEeccCCCceEEE-------------EEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHH-
Confidence            466779999999999999             7665 478999999865322   2234 99999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +.+..+...+ +|+||+++++|.+++...
T Consensus        67 ~~~~~~~~~~-lv~e~~~~~~L~~~l~~~   94 (258)
T cd05578          67 YSFQDEENMY-LVVDLLLGGDLRYHLSQK   94 (258)
T ss_pred             HhhcCCCeEE-EEEeCCCCCCHHHHHHhc
Confidence            9888888888 999999999999998643

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=98.88  E-value=2.6e-09  Score=92.46  Aligned_cols=93  Identities=19%  Similarity=0.220  Sum_probs=73.8

Q ss_pred             ceecccCccceeccccccccccccceeecCC----CcEEEEEEccCCCC-chhH-HHHHHHHhhhCCCCccceeccceEe
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARID----ARVVAARIVFAGSV-TGIF-FARSVTEVAKIYARSRPRSYPSVVI  235 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~----~~~vAvK~l~~~~~-~~~~-f~~e~~~l~~l~H~nlv~l~~g~~~  235 (282)
                      +.||+|++|.||+             +...+    ...||+|.+..... ...+ |.+|+.++.+++|+||+++. +.+.
T Consensus         1 ~~ig~g~~~~v~~-------------~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~-~~~~   66 (257)
T cd05040           1 KKLGDGSFGVVRR-------------GEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLY-GVVL   66 (257)
T ss_pred             CcCCccCcccEEe-------------eeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCcccee-EEEc
Confidence            3689999999999             76432    23699999976555 3344 99999999999999999999 9988


Q ss_pred             eCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          236 RPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       236 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      . ...+ +++||+++|+|.+++.+... ..++|...
T Consensus        67 ~-~~~~-~v~e~~~~~~L~~~l~~~~~-~~~~~~~~   99 (257)
T cd05040          67 T-HPLM-MVTELAPLGSLLDRLRKDAL-GHFLISTL   99 (257)
T ss_pred             C-CeEE-EEEEecCCCcHHHHHHhccc-ccCcHHHH
Confidence            7 6666 99999999999999976432 34566544

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=98.88  E-value=2.1e-09  Score=92.71  Aligned_cols=97  Identities=19%  Similarity=0.263  Sum_probs=79.7

Q ss_pred             cCccccceecccCccceeccccccccccccceeecCC-CcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARID-ARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~-~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      ++|+..+.||+|+||.||+             +...+ +..+++|.+.....  .. +.+|+..++.++|+|++++. |.
T Consensus         3 ~~y~~~~~i~~g~~~~v~~-------------~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~-~~   66 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYK-------------AIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYY-GS   66 (256)
T ss_pred             ccchhhhhhcCCCCeEEEE-------------EEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeee-ee
Confidence            5677789999999999999             77654 78999999864322  44 99999999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      +......+ +++||+++++|.+++....  ..++|...
T Consensus        67 ~~~~~~~~-l~~e~~~~~~L~~~l~~~~--~~l~~~~~  101 (256)
T cd06612          67 YFKNTDLW-IVMEYCGAGSVSDIMKITN--KTLTEEEI  101 (256)
T ss_pred             eecCCcEE-EEEecCCCCcHHHHHHhCc--cCCCHHHH
Confidence            98888888 9999999999999986433  24555443

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=98.88  E-value=2.8e-09  Score=96.44  Aligned_cols=97  Identities=15%  Similarity=0.175  Sum_probs=73.0

Q ss_pred             cCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCc-hhH-HHHHHHHhhhC-CCCccceeccc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVT-GIF-FARSVTEVAKI-YARSRPRSYPS  232 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l-~H~nlv~l~~g  232 (282)
                      ..|...+.||+|+||.||++...+...     ........||+|.+...... ..+ +.+|+.++.++ +|+||+++. +
T Consensus        12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~-----~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~-~   85 (334)
T cd05100          12 TRLTLGKPLGEGCFGQVVMAEAIGIDK-----DKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLL-G   85 (334)
T ss_pred             hHeeecceeccccCCcEEEEEEeccCC-----ccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeee-E
Confidence            346777999999999999932221100     00112347899988754322 234 99999999999 899999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      .+...+..+ +++||+++|+|.++|..
T Consensus        86 ~~~~~~~~~-lv~e~~~~g~L~~~l~~  111 (334)
T cd05100          86 ACTQDGPLY-VLVEYASKGNLREYLRA  111 (334)
T ss_pred             EEccCCceE-EEEecCCCCcHHHHHHh
Confidence            998888888 99999999999999865

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=98.87  E-value=5.1e-09  Score=91.99  Aligned_cols=97  Identities=19%  Similarity=0.206  Sum_probs=75.6

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc--hhH-HHHHHHHhhhCCCCccceeccc
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT--GIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~--~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      +|...+.||+|+||.||+             +... ++..||+|.+......  ..+ +.+|+.++..++|+|+++++ +
T Consensus         1 ~y~~~~~l~~g~~~~v~~-------------~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~-~   66 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYK-------------GRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQ-D   66 (285)
T ss_pred             CceEeeEecccCceEEEE-------------EEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeE-E
Confidence            356668999999999999             7754 5889999988643222  224 88999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYP  269 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~  269 (282)
                      .+..++..+ +||||++ |+|.+++........+++.
T Consensus        67 ~~~~~~~~~-~v~e~~~-~~l~~~~~~~~~~~~~~~~  101 (285)
T cd07861          67 VLMQESRLY-LIFEFLS-MDLKKYLDSLPKGQYMDAE  101 (285)
T ss_pred             EEeeCCeEE-EEEecCC-CCHHHHHhcCCCCCcCCHH
Confidence            998888888 9999998 6888887543322345544

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=98.87  E-value=4.5e-09  Score=95.13  Aligned_cols=84  Identities=13%  Similarity=0.030  Sum_probs=68.3

Q ss_pred             ceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC---chhH-HHHHHHHhhhC-CCCccceeccceEe
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV---TGIF-FARSVTEVAKI-YARSRPRSYPSVVI  235 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~---~~~~-f~~e~~~l~~l-~H~nlv~l~~g~~~  235 (282)
                      +.||+|+||.||+             +... .+..+|+|.+.....   .... +.+|+.++.++ +|+||++++ +++.
T Consensus         1 ~~lG~G~~g~V~~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~-~~~~   66 (329)
T cd05618           1 RVIGRGSYAKVLL-------------VRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH-SCFQ   66 (329)
T ss_pred             CeeeeCCCeEEEE-------------EEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCcee-eEEE
Confidence            4699999999999             7654 578999999875321   2223 78888888776 899999999 9988


Q ss_pred             eCCeEEEEEEecCCCCCccccccCC
Q 043820          236 RPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       236 ~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ..+..+ +||||+++|+|..++...
T Consensus        67 ~~~~~~-lv~E~~~~~~L~~~~~~~   90 (329)
T cd05618          67 TESRLF-FVIEYVNGGDLMFHMQRQ   90 (329)
T ss_pred             eCCEEE-EEEeCCCCCCHHHHHHHc
Confidence            888888 999999999998887543

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=98.87  E-value=5.2e-09  Score=93.07  Aligned_cols=89  Identities=19%  Similarity=0.209  Sum_probs=73.2

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCccceeccc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      +.|...+.||+|+||.||+             +... .+..||+|.+....... .. +.+|+.++..++|+||++++ +
T Consensus         6 ~~y~~~~~lg~g~~g~vy~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~-~   71 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYK-------------GRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLH-D   71 (301)
T ss_pred             cceEEeeEeccCcCEEEEE-------------EEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEE-E
Confidence            3567778999999999999             7654 57899999986433222 33 88999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ++...+..+ +||||++ ++|.+++...
T Consensus        72 ~~~~~~~~~-lv~e~~~-~~l~~~l~~~   97 (301)
T cd07873          72 IIHTEKSLT-LVFEYLD-KDLKQYLDDC   97 (301)
T ss_pred             EEecCCeEE-EEEeccc-cCHHHHHHhc
Confidence            998888888 9999998 5898888653

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=98.87  E-value=3.6e-09  Score=95.38  Aligned_cols=87  Identities=13%  Similarity=0.070  Sum_probs=68.5

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHH---hhhCCCCcccee
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTE---VAKIYARSRPRS  229 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~---l~~l~H~nlv~l  229 (282)
                      |...+.||+|+||.||+             +... .+..||+|.+....   ....+ +.+|+.+   +..++|+||+++
T Consensus         1 y~i~~~lg~G~~g~Vy~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~   67 (324)
T cd05589           1 FRCLAVLGRGHFGKVLL-------------AEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNL   67 (324)
T ss_pred             CeEEEEEeecCCEEEEE-------------EEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhce
Confidence            34568999999999999             7654 57899999986432   12223 6666655   457789999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      + +++..++..+ +||||+++|+|..++..
T Consensus        68 ~-~~~~~~~~~~-lv~E~~~~~~L~~~~~~   95 (324)
T cd05589          68 F-ACFQTEDHVC-FVMEYAAGGDLMMHIHT   95 (324)
T ss_pred             e-eEEEcCCEEE-EEEcCCCCCcHHHHhhc
Confidence            9 9998888888 99999999999988754

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=98.87  E-value=2.7e-09  Score=93.98  Aligned_cols=97  Identities=19%  Similarity=0.131  Sum_probs=72.6

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCc----EEEEEEccCCCCchh-H-HHHHHHHhhhCCCCcccee
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DAR----VVAARIVFAGSVTGI-F-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~----~vAvK~l~~~~~~~~-~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      +|...+.||+|+||.||+             +... ++.    .+++|.+........ . +..|+..+.++.|+||+++
T Consensus         8 ~~~~~~~lg~G~~~~vy~-------------~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~   74 (279)
T cd05111           8 ELRKLKLLGSGVFGTVHK-------------GIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRL   74 (279)
T ss_pred             hceeccccCccCCcceEE-------------EEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceE
Confidence            456668999999999999             7643 333    578888864333222 3 8888889999999999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      + |++. +...+ +++||+++|+|.+++....  ..++|...
T Consensus        75 ~-~~~~-~~~~~-~i~e~~~~gsL~~~l~~~~--~~~~~~~~  111 (279)
T cd05111          75 L-GICP-GASLQ-LVTQLSPLGSLLDHVRQHR--DSLDPQRL  111 (279)
T ss_pred             E-EEEC-CCccE-EEEEeCCCCcHHHHHHhcc--cCCCHHHH
Confidence            9 9875 44556 8999999999999997543  24555543

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=98.87  E-value=5.9e-09  Score=90.93  Aligned_cols=85  Identities=22%  Similarity=0.250  Sum_probs=66.8

Q ss_pred             cccceecccCccceeccccccccccccceeecCC-C--cEEEEEEccCCCCc--hhH-HHHHHHHhhhCCCCccceeccc
Q 043820          159 SINNKLGEGGFGPVYKVVAAGICFAGTITGARID-A--RVVAARIVFAGSVT--GIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       159 ~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~-~--~~vAvK~l~~~~~~--~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      ...+.||+|+||.||+             |.... +  ..+|+|.++.....  ..+ |.+|+.++..++|+||++++ |
T Consensus         2 ~i~~~ig~G~~g~V~~-------------~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~-~   67 (272)
T cd05075           2 ALGKTLGEGEFGSVME-------------GQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLI-G   67 (272)
T ss_pred             ccccccCcccCceEEE-------------eEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEE-E
Confidence            3458899999999999             77653 2  26899988654222  233 99999999999999999999 9


Q ss_pred             eEeeC------CeEEEEEEecCCCCCcccccc
Q 043820          233 VVIRP------GYKVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       233 ~~~~~------~~~~~lv~Ey~~~GsL~~~l~  258 (282)
                      .+...      ...+ +++||+++|+|.+++.
T Consensus        68 ~~~~~~~~~~~~~~~-~v~e~~~~~~l~~~~~   98 (272)
T cd05075          68 VCLQTVESEGYPSPV-VILPFMKHGDLHSFLL   98 (272)
T ss_pred             EEccCCcccCCCCcE-EEEEeCCCCcHHHHHH
Confidence            87542      2346 9999999999999874

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=98.86  E-value=5.4e-09  Score=92.29  Aligned_cols=89  Identities=19%  Similarity=0.250  Sum_probs=73.9

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCccceeccc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      ++|...+.||+|++|.||+             +... ++..||+|.+....... .. +.+|+.++..++|+||++++ +
T Consensus         5 ~~y~~~~~lg~g~~~~vy~-------------~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~-~   70 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYK-------------GRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLH-D   70 (291)
T ss_pred             cceeEEEEEeecCCeEEEE-------------EEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEE-E
Confidence            4577779999999999999             7755 57899999986543322 23 88999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ++.+.+..+ +||||+++ +|.+++...
T Consensus        71 ~~~~~~~~~-lv~e~~~~-~L~~~~~~~   96 (291)
T cd07844          71 IIHTKKTLT-LVFEYLDT-DLKQYMDDC   96 (291)
T ss_pred             EEecCCeEE-EEEecCCC-CHHHHHHhC
Confidence            998888888 99999985 898887643

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=98.86  E-value=5.3e-09  Score=90.13  Aligned_cols=84  Identities=19%  Similarity=0.192  Sum_probs=72.4

Q ss_pred             ceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCccceeccceEeeCCe
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPRSYPSVVIRPGY  239 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~l~~g~~~~~~~  239 (282)
                      ++||+|+||.||+             +...++..||+|.+...... ... |.+|+.++.+++|+||++++ +++.....
T Consensus         1 ~~lg~g~~g~v~~-------------~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~-~~~~~~~~   66 (251)
T cd05041           1 EKIGKGNFGDVYK-------------GVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLI-GVCVQKQP   66 (251)
T ss_pred             CccccCCCceEEE-------------EEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEE-EEEecCCC
Confidence            3689999999999             87766899999988754433 334 99999999999999999999 99988888


Q ss_pred             EEEEEEecCCCCCccccccCC
Q 043820          240 KVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       240 ~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      .+ ++|||+++++|.+++...
T Consensus        67 ~~-~v~e~~~~~~l~~~l~~~   86 (251)
T cd05041          67 IY-IVMELVPGGSLLTFLRKK   86 (251)
T ss_pred             eE-EEEEcCCCCcHHHHHHhc
Confidence            88 999999999999998653

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=98.86  E-value=6.1e-09  Score=90.70  Aligned_cols=89  Identities=17%  Similarity=0.250  Sum_probs=71.3

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---C--chhH-HHHHHHHhhhCCCCccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---V--TGIF-FARSVTEVAKIYARSRPR  228 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~--~~~~-f~~e~~~l~~l~H~nlv~  228 (282)
                      .+|...+.||+|+||.||.             +... ++..||+|.+....   .  ...+ +.+|+.++.+++|+||++
T Consensus         2 ~~~~~~~~l~~g~~g~v~~-------------~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~   68 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYL-------------CYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQ   68 (265)
T ss_pred             CcceEeeEEecCCceEEEE-------------EEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeee
Confidence            4677889999999999999             7754 47899999875321   1  1123 889999999999999999


Q ss_pred             eccceEeeC--CeEEEEEEecCCCCCccccccC
Q 043820          229 SYPSVVIRP--GYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       229 l~~g~~~~~--~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +. |++.+.  ...+ ++|||+++|+|.+++..
T Consensus        69 ~~-~~~~~~~~~~~~-~v~e~~~~~~L~~~l~~   99 (265)
T cd06652          69 YY-GCLRDPMERTLS-IFMEHMPGGSIKDQLKS   99 (265)
T ss_pred             EE-eEeccCCCceEE-EEEEecCCCcHHHHHHH
Confidence            99 987654  3345 99999999999998854

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=98.86  E-value=5.6e-09  Score=92.26  Aligned_cols=90  Identities=19%  Similarity=0.297  Sum_probs=74.2

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchh-H-HHHHHHHhhhCCCCccceec
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGI-F-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~-~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ++++|...+.||+|+||.||+             +... ++..||+|.+........ . +.+|+.++..++|+||+++.
T Consensus         3 ~~~~y~~~~~ig~g~~~~v~~-------------~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~   69 (291)
T cd07870           3 AATSYLNLEKLGEGSYATVYK-------------GISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLH   69 (291)
T ss_pred             ccceeEEEEEEEecCCEEEEE-------------EEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEE
Confidence            456788889999999999999             7654 578999999865433332 3 88999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                       +++..+...+ +|+||+. ++|.+++..
T Consensus        70 -~~~~~~~~~~-lv~e~~~-~~l~~~~~~   95 (291)
T cd07870          70 -DIIHTKETLT-FVFEYMH-TDLAQYMIQ   95 (291)
T ss_pred             -EEEecCCeEE-EEEeccc-CCHHHHHHh
Confidence             9988888888 9999996 677777654

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=98.86  E-value=4.6e-09  Score=91.75  Aligned_cols=88  Identities=13%  Similarity=0.173  Sum_probs=71.8

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC---c-------hhH-HHHHHHHhhhCCCCc
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV---T-------GIF-FARSVTEVAKIYARS  225 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~---~-------~~~-f~~e~~~l~~l~H~n  225 (282)
                      |...+.||+|+||.||+             |... ++..+|+|.+.....   .       ..+ +.+|+.++..++|+|
T Consensus         3 ~~~~~~lg~g~~~~vy~-------------~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~   69 (272)
T cd06629           3 WVKGELIGKGTYGRVYL-------------ALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLN   69 (272)
T ss_pred             eeecceecccCceEEEE-------------EeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCC
Confidence            44558999999999999             7643 588999998753211   0       123 788999999999999


Q ss_pred             cceeccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          226 RPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       226 lv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +++++ |++..++..+ +||||+++|+|.+++...
T Consensus        70 i~~~~-~~~~~~~~~~-lv~e~~~~~~L~~~l~~~  102 (272)
T cd06629          70 IVQYL-GFETTEEYLS-IFLEYVPGGSIGSCLRTY  102 (272)
T ss_pred             cceEE-EEeccCCceE-EEEecCCCCcHHHHHhhc
Confidence            99999 9998888888 999999999999998654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=98.86  E-value=4.8e-09  Score=91.02  Aligned_cols=84  Identities=14%  Similarity=0.130  Sum_probs=66.7

Q ss_pred             ceecccCccceeccccccccccccceeecC----CCcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCccceeccceEe
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARI----DARVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPRSYPSVVI  235 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~----~~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~l~~g~~~  235 (282)
                      +.||+|+||.||+             |...    ....+|+|.+...... ..+ |.+|+.+++.++|+|+++++ |.+.
T Consensus         1 ~~lg~g~~g~v~~-------------~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~-~~~~   66 (262)
T cd05058           1 RVIGKGHFGCVYH-------------GTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLL-GICL   66 (262)
T ss_pred             CcccccCCceEEE-------------EEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEE-EEee
Confidence            4689999999999             6542    2467999998643322 234 99999999999999999999 9876


Q ss_pred             eCC-eEEEEEEecCCCCCccccccCC
Q 043820          236 RPG-YKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       236 ~~~-~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ..+ ..+ +++||+++|+|.+++...
T Consensus        67 ~~~~~~~-lv~e~~~~~~L~~~~~~~   91 (262)
T cd05058          67 PSEGSPL-VVLPYMKHGDLRNFIRSE   91 (262)
T ss_pred             cCCCCcE-EEEecCCCCCHHHHHHhc
Confidence            544 456 999999999999998653

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=98.86  E-value=7.2e-09  Score=89.70  Aligned_cols=91  Identities=12%  Similarity=0.225  Sum_probs=77.2

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccc
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      .++|...+.||+|+||.||+             +... ++..+++|.+........+ +.+|+.++..++|+|++++. |
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~-------------~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~-~   67 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYK-------------ARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYF-G   67 (262)
T ss_pred             ccceEEEEEecCCCceEEEE-------------eEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceE-E
Confidence            35677789999999999999             7654 4678999998755444445 99999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ........+ ++|||+++++|.+++...
T Consensus        68 ~~~~~~~~~-l~~e~~~~~~l~~~~~~~   94 (262)
T cd06613          68 SYLRRDKLW-IVMEYCGGGSLQDIYQVT   94 (262)
T ss_pred             EEEeCCEEE-EEEeCCCCCcHHHHHHhh
Confidence            988888888 999999999999988654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=98.86  E-value=7.6e-09  Score=89.13  Aligned_cols=97  Identities=23%  Similarity=0.268  Sum_probs=77.1

Q ss_pred             cccceecccCccceeccccccccccccceeecCC-----CcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCccceecc
Q 043820          159 SINNKLGEGGFGPVYKVVAAGICFAGTITGARID-----ARVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       159 ~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~-----~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      ...+.||+|+||.||+             +...+     +..||+|.+...... ..+ +..|+..+..++|+|+++++ 
T Consensus         2 ~~~~~lg~g~~g~v~~-------------~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~-   67 (258)
T smart00219        2 TLGKKLGEGAFGEVYK-------------GTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLL-   67 (258)
T ss_pred             cccceeccCCCcceEE-------------EEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEE-
Confidence            3458899999999999             66543     378999999765443 344 99999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      +.+...+..+ ++|||+++++|.+++..... ..++|.+.
T Consensus        68 ~~~~~~~~~~-~i~e~~~~~~l~~~~~~~~~-~~~~~~~~  105 (258)
T smart00219       68 GVCTEEEPLM-IVMEYMEGGDLLDYLRKNRP-KELSLSDL  105 (258)
T ss_pred             EEEcCCCeeE-EEEeccCCCCHHHHHHhhhh-ccCCHHHH
Confidence            9998888888 99999999999999875431 11555443

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=98.85  E-value=2.4e-09  Score=93.30  Aligned_cols=96  Identities=20%  Similarity=0.215  Sum_probs=74.0

Q ss_pred             ceecccCccceeccccccccccccceeecC-------CCcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCccceeccc
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARI-------DARVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-------~~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      +.||+|+||.||+             +...       .+..+|+|.+...... ... |.+|+.+++.++|+||++++ |
T Consensus         1 ~~lg~g~~g~vy~-------------~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~-~   66 (269)
T cd05044           1 NFLGSGAFGEVYE-------------GTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLL-G   66 (269)
T ss_pred             CccccccceeEEe-------------eeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEe-e
Confidence            4689999999999             5532       2357899988654322 233 99999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCCCC----CcCCCCCccc
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHSSR----VRSLQYPDPA  272 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~----~~~l~W~~R~  272 (282)
                      ++...+..+ ++|||+++|+|.++|.+...    ...++|.+.+
T Consensus        67 ~~~~~~~~~-~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~  109 (269)
T cd05044          67 VCLLNEPQY-IIMELMEGGDLLSYLRDARVERFGPPLLTLKELL  109 (269)
T ss_pred             eecCCCCeE-EEEeccCCCcHHHHHHHhhhcccCCccccHHHHH
Confidence            998888888 99999999999999975321    2235665544

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=98.85  E-value=6.1e-09  Score=91.11  Aligned_cols=84  Identities=20%  Similarity=0.179  Sum_probs=68.8

Q ss_pred             ceecccCccceeccccccccccccceeecCC-C--cEEEEEEccCCCC-chhH-HHHHHHHhhhC-CCCccceeccceEe
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARID-A--RVVAARIVFAGSV-TGIF-FARSVTEVAKI-YARSRPRSYPSVVI  235 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~-~--~~vAvK~l~~~~~-~~~~-f~~e~~~l~~l-~H~nlv~l~~g~~~  235 (282)
                      +.||+|+||.||+             +...+ +  ..+++|.+..... ...+ +.+|+.++.++ +|+|+++++ +++.
T Consensus         1 ~~lg~g~~g~v~~-------------~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~-~~~~   66 (270)
T cd05047           1 DVIGEGNFGQVLK-------------ARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL-GACE   66 (270)
T ss_pred             CcCCCCCCceEEE-------------EEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEE-EEEe
Confidence            3689999999999             77643 3  3578888875332 2334 99999999999 899999999 9998


Q ss_pred             eCCeEEEEEEecCCCCCccccccCC
Q 043820          236 RPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       236 ~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ..+..+ ++|||+++|+|.++|...
T Consensus        67 ~~~~~~-lv~e~~~~~~L~~~i~~~   90 (270)
T cd05047          67 HRGYLY-LAIEYAPHGNLLDFLRKS   90 (270)
T ss_pred             cCCCce-EEEEeCCCCcHHHHHHhc
Confidence            888888 999999999999998653

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=98.85  E-value=3.8e-09  Score=92.88  Aligned_cols=87  Identities=18%  Similarity=0.186  Sum_probs=72.2

Q ss_pred             ccccceecccCccceeccccccccccccceeecC------CCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCcccee
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI------DARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~------~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      |...++||+|+||.||+             |...      .+..||+|.+....... .+ |.+|+.++..++|+||+++
T Consensus         7 ~~~~~~lg~G~~g~V~~-------------~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~   73 (283)
T cd05091           7 VRFMEELGEDRFGKVYK-------------GHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCL   73 (283)
T ss_pred             HHHHHHhCCCCCCeEEE-------------EEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeE
Confidence            44558899999999999             6532      25789999997544333 23 8999999999999999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      + |.+...+..+ +++||+++++|.+++..
T Consensus        74 ~-~~~~~~~~~~-~~~e~~~~~~l~~~l~~  101 (283)
T cd05091          74 L-GVVTKEQPLS-MIFSYCSHSDLHEFLVM  101 (283)
T ss_pred             E-EEEcCCCceE-EEEEcCCCCcHHHHHHh
Confidence            9 9998888888 99999999999999853

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=98.85  E-value=3.6e-09  Score=92.99  Aligned_cols=97  Identities=22%  Similarity=0.227  Sum_probs=76.3

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc--hhH-HHHHHHHhhhCCCCccceeccc
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT--GIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~--~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      +|+..+.||.|+||.||+             +... ++..||+|.+......  ... +.+|+.++.+++|+||+++. +
T Consensus         1 ~y~~~~~l~~g~~~~v~~-------------~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~-~   66 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYK-------------ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL-D   66 (284)
T ss_pred             CceeeeeecCCCceEEEE-------------EEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchh-h
Confidence            467778999999999999             7654 5789999988643322  223 89999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCc
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPD  270 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~  270 (282)
                      ++...+..+ ++|||++ ++|.+++..... ..++|..
T Consensus        67 ~~~~~~~~~-~v~e~~~-~~l~~~~~~~~~-~~l~~~~  101 (284)
T cd07860          67 VIHTENKLY-LVFEFLH-QDLKKFMDASPL-SGIPLPL  101 (284)
T ss_pred             hcccCCcEE-EEeeccc-cCHHHHHHhCCC-CCCCHHH
Confidence            998888888 9999996 689888865432 2355543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=98.84  E-value=5.2e-09  Score=90.78  Aligned_cols=82  Identities=21%  Similarity=0.183  Sum_probs=66.4

Q ss_pred             eecccCccceeccccccccccccceeec---CCCcEEEEEEccCCCCc--hhH-HHHHHHHhhhCCCCccceeccceEee
Q 043820          163 KLGEGGFGPVYKVVAAGICFAGTITGAR---IDARVVAARIVFAGSVT--GIF-FARSVTEVAKIYARSRPRSYPSVVIR  236 (282)
Q Consensus       163 ~lG~G~fG~Vy~~~~~~~~~~~~~~g~~---~~~~~vAvK~l~~~~~~--~~~-f~~e~~~l~~l~H~nlv~l~~g~~~~  236 (282)
                      +||+|+||.||+             |..   .++..+|+|.+......  ..+ |.+|+.++..++|+||++++ |.+. 
T Consensus         2 ~lg~G~~g~v~~-------------~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~-~~~~-   66 (257)
T cd05116           2 ELGSGNFGTVKK-------------GMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMI-GICE-   66 (257)
T ss_pred             cCCCcCCcceEE-------------eEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEE-EEEc-
Confidence            589999999999             653   24688999998644322  234 99999999999999999999 9874 


Q ss_pred             CCeEEEEEEecCCCCCccccccCC
Q 043820          237 PGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       237 ~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      .+..+ +||||+++|+|.+++...
T Consensus        67 ~~~~~-lv~e~~~~~~L~~~l~~~   89 (257)
T cd05116          67 AESWM-LVMELAELGPLNKFLQKN   89 (257)
T ss_pred             CCCcE-EEEecCCCCcHHHHHHhc
Confidence            45556 999999999999998643

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=98.84  E-value=9.6e-09  Score=89.35  Aligned_cols=87  Identities=18%  Similarity=0.249  Sum_probs=71.7

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch---------hH-HHHHHHHhhhCCCCcc
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG---------IF-FARSVTEVAKIYARSR  226 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~---------~~-f~~e~~~l~~l~H~nl  226 (282)
                      |.....||+|+||.||+             +... ++..+|+|.+.......         .+ +.+|+.++.+++|+||
T Consensus         2 ~~~~~~ig~g~~~~v~~-------------a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i   68 (267)
T cd06628           2 WIKGALIGSGSFGSVYL-------------GMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENI   68 (267)
T ss_pred             ccccceeecCCCeEEEE-------------EEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCe
Confidence            44558999999999999             7643 57899999886432211         13 8899999999999999


Q ss_pred             ceeccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          227 PRSYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       227 v~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +++. +++......+ +++||+++++|.+++..
T Consensus        69 ~~~~-~~~~~~~~~~-lv~e~~~~~~L~~~l~~   99 (267)
T cd06628          69 VQYL-GSSLDADHLN-IFLEYVPGGSVAALLNN   99 (267)
T ss_pred             eeEE-EEEEeCCccE-EEEEecCCCCHHHHHHh
Confidence            9999 9998888888 99999999999999854

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=98.84  E-value=5.1e-09  Score=90.23  Aligned_cols=84  Identities=26%  Similarity=0.251  Sum_probs=71.5

Q ss_pred             ceecccCccceeccccccccccccceeecCC----CcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCccceeccceEe
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARID----ARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRSYPSVVI  235 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~----~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l~~g~~~  235 (282)
                      +.||+|+||.||+             +....    +..+++|.+....... .+ +.+|+..+..++|+|+++++ +++.
T Consensus         1 ~~ig~g~~g~v~~-------------~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~-~~~~   66 (262)
T cd00192           1 KKLGEGAFGEVYK-------------GKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLL-GVCT   66 (262)
T ss_pred             CccccCCceEEEE-------------EEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheee-eeec
Confidence            4689999999999             66542    7889999997654433 34 99999999999999999999 9998


Q ss_pred             eCCeEEEEEEecCCCCCccccccCC
Q 043820          236 RPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       236 ~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      .....+ ++|||+++|+|.+++...
T Consensus        67 ~~~~~~-lv~e~~~~~~L~~~l~~~   90 (262)
T cd00192          67 EEEPLY-LVLEYMEGGDLLDYLRKS   90 (262)
T ss_pred             CCCceE-EEEEeccCCcHHHHHhhc
Confidence            877777 999999999999999765

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=98.84  E-value=7.1e-09  Score=88.98  Aligned_cols=97  Identities=16%  Similarity=0.166  Sum_probs=79.0

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC--chhH-HHHHHHHhhhCCCCccceeccce
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV--TGIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~--~~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      |+..+.||+|++|.||+             +... ++..|++|.+.....  ...+ +.+|+..+++++|+||+++. +.
T Consensus         2 ~~~~~~i~~g~~~~v~~-------------~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~-~~   67 (260)
T cd06606           2 WTRGELLGRGSFGSVYL-------------ALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYY-GS   67 (260)
T ss_pred             ceeeeEeeecCceEEEE-------------EEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEE-EE
Confidence            56668999999999999             8765 588999999865443  2234 99999999999999999999 99


Q ss_pred             EeeC--CeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          234 VIRP--GYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       234 ~~~~--~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      +...  ...+ +++||+++++|.+++....   .++|..+.
T Consensus        68 ~~~~~~~~~~-lv~e~~~~~~L~~~~~~~~---~~~~~~~~  104 (260)
T cd06606          68 ERDEEKNTLN-IFLEYVSGGSLSSLLKKFG---KLPEPVIR  104 (260)
T ss_pred             EecCCCCeEE-EEEEecCCCcHHHHHHHcC---CCCHHHHH
Confidence            8887  6777 9999999999999986543   45665543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=98.84  E-value=8.7e-09  Score=90.20  Aligned_cols=88  Identities=18%  Similarity=0.289  Sum_probs=72.8

Q ss_pred             CccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCc-hhH-HHHHHHHhhhCC---CCccceec
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVT-GIF-FARSVTEVAKIY---ARSRPRSY  230 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~---H~nlv~l~  230 (282)
                      .|+..+.||+|+||.||+             +.. .++..+|+|.+...... ... +.+|+.+++.++   |+|++++.
T Consensus         2 ~y~~~~~l~~g~~g~v~~-------------~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~   68 (277)
T cd06917           2 LYQRLELIGRGAYGAVYR-------------GKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYY   68 (277)
T ss_pred             hhhhhhheeccCCceEEE-------------EEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEe
Confidence            355668999999999999             775 35889999998654322 233 889999999886   99999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                       |++..+...+ ++|||+++++|.+++..
T Consensus        69 -~~~~~~~~~~-lv~e~~~~~~L~~~~~~   95 (277)
T cd06917          69 -GSYLKGPRLW-IIMEYAEGGSVRTLMKA   95 (277)
T ss_pred             -eeeeeCCEEE-EEEecCCCCcHHHHHHc
Confidence             9998888888 99999999999998854

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=98.84  E-value=5.8e-09  Score=90.53  Aligned_cols=89  Identities=13%  Similarity=0.063  Sum_probs=75.3

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCccceeccce
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      +|+..+.||+|+||.||+             +... ++..+|+|.+...... ..+ +.+|+.++..++|+||+++. +.
T Consensus         2 ~~~~~~~ig~g~~~~v~~-------------~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~-~~   67 (265)
T cd06605           2 DLEYLGELGAGNSGVVSK-------------VLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFY-GA   67 (265)
T ss_pred             cchHHHHhcCCCCeEEEE-------------EEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhh-ee
Confidence            456668999999999999             7655 5789999998765433 333 99999999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccCC
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +......+ +++||+++++|.+++...
T Consensus        68 ~~~~~~~~-lv~e~~~~~~L~~~~~~~   93 (265)
T cd06605          68 FYNNGDIS-ICMEYMDGGSLDKILKEV   93 (265)
T ss_pred             eecCCEEE-EEEEecCCCcHHHHHHHc
Confidence            98888888 999999999999998654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=98.83  E-value=3.9e-09  Score=94.93  Aligned_cols=84  Identities=14%  Similarity=0.054  Sum_probs=68.6

Q ss_pred             ceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhC-CCCccceeccceEe
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKI-YARSRPRSYPSVVI  235 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l-~H~nlv~l~~g~~~  235 (282)
                      +.||+|+||.||+             +... .+..||+|.+....   ..... +..|..++..+ +|+||++++ +++.
T Consensus         1 ~~lG~G~~g~V~~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~-~~~~   66 (318)
T cd05570           1 KVLGKGSFGKVLL-------------AELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLH-SCFQ   66 (318)
T ss_pred             CeeeeCCCeEEEE-------------EEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCcccee-eEEE
Confidence            4689999999999             7654 47899999987532   12233 78888888877 799999999 9988


Q ss_pred             eCCeEEEEEEecCCCCCccccccCC
Q 043820          236 RPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       236 ~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ..+..+ +||||+++|+|..++...
T Consensus        67 ~~~~~~-lv~e~~~~~~L~~~~~~~   90 (318)
T cd05570          67 TKDRLF-FVMEYVNGGDLMFHIQRS   90 (318)
T ss_pred             cCCEEE-EEEcCCCCCCHHHHHHHc
Confidence            888877 999999999999888654

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=98.83  E-value=5e-09  Score=94.30  Aligned_cols=84  Identities=14%  Similarity=0.036  Sum_probs=68.2

Q ss_pred             ceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhC-CCCccceeccceEe
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKI-YARSRPRSYPSVVI  235 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l-~H~nlv~l~~g~~~  235 (282)
                      +.||+|+||.||+             +... .+..||+|.+....   ....+ +..|..++..+ +|+||++++ +++.
T Consensus         1 ~~lG~G~~g~Vy~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~-~~~~   66 (321)
T cd05591           1 KVLGKGSFGKVML-------------AELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALH-CCFQ   66 (321)
T ss_pred             CccccCCCeEEEE-------------EEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCcccee-eEEE
Confidence            3689999999999             7654 47899999986532   12223 78888888866 899999999 9988


Q ss_pred             eCCeEEEEEEecCCCCCccccccCC
Q 043820          236 RPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       236 ~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ..+..+ +||||+++|+|..++...
T Consensus        67 ~~~~~~-lv~E~~~~~~L~~~l~~~   90 (321)
T cd05591          67 TKDRLF-FVMEYVNGGDLMFQIQRS   90 (321)
T ss_pred             cCCeEE-EEEeCCCCCcHHHHHHHc
Confidence            888888 999999999999888643

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=98.83  E-value=5.9e-09  Score=91.62  Aligned_cols=99  Identities=16%  Similarity=0.264  Sum_probs=78.9

Q ss_pred             cCHHHHHHhccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhHHHHHHHHhhhC-CC
Q 043820          146 FELATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIFFARSVTEVAKI-YA  223 (282)
Q Consensus       146 ~~~~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l-~H  223 (282)
                      .++.++..+.+.|+..+.||+|+||.||+             +... .+..+|+|.+.........+..|+.++.++ +|
T Consensus         6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~-------------~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h   72 (282)
T cd06636           6 IDLSALRDPAGIFELVEVVGNGTYGQVYK-------------GRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHH   72 (282)
T ss_pred             hhhhhhcChhhhhhhheeeccCCCeEEEE-------------EEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCC
Confidence            46667777888899889999999999999             7654 578999998854322222288899999988 79


Q ss_pred             CccceeccceEee------CCeEEEEEEecCCCCCccccccC
Q 043820          224 RSRPRSYPSVVIR------PGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       224 ~nlv~l~~g~~~~------~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +|++++. +++..      ....+ ++|||+++|+|.+++..
T Consensus        73 ~~i~~~~-~~~~~~~~~~~~~~~~-iv~e~~~~~~L~~~~~~  112 (282)
T cd06636          73 RNIATYY-GAFIKKSPPGHDDQLW-LVMEFCGAGSVTDLVKN  112 (282)
T ss_pred             CcEEEEe-eehhcccccCCCCEEE-EEEEeCCCCcHHHHHHH
Confidence            9999999 88753      33456 99999999999998864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=98.83  E-value=7.5e-09  Score=93.11  Aligned_cols=84  Identities=12%  Similarity=0.053  Sum_probs=67.8

Q ss_pred             ceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhh-CCCCccceeccceEe
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAK-IYARSRPRSYPSVVI  235 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~-l~H~nlv~l~~g~~~  235 (282)
                      +.||+|+||.||+             +... .+..||+|.+....   ..... +..|..++.. ++||||++++ +.+.
T Consensus         1 ~~lG~G~~g~Vy~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~-~~~~   66 (316)
T cd05619           1 KMLGKGSFGKVFL-------------AELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLY-CTFQ   66 (316)
T ss_pred             CeeeeCCCEEEEE-------------EEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceE-EEEE
Confidence            3689999999999             7755 47899999987532   12233 6777777775 4999999999 9998


Q ss_pred             eCCeEEEEEEecCCCCCccccccCC
Q 043820          236 RPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       236 ~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +.+..+ +||||+++|+|.+++...
T Consensus        67 ~~~~~~-lv~ey~~~g~L~~~l~~~   90 (316)
T cd05619          67 TKENLF-FVMEYLNGGDLMFHIQSC   90 (316)
T ss_pred             eCCEEE-EEEeCCCCCcHHHHHHHc
Confidence            888888 999999999999988643

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=98.83  E-value=8.8e-09  Score=94.68  Aligned_cols=87  Identities=15%  Similarity=0.135  Sum_probs=70.2

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC--chhH-HHHHHHHhhhCCCCccceeccc
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV--TGIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~--~~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      +|+..+.||+|+||.||+             +... ++..||+|.+.....  ...+ +.+|+.++..++|+||++++ +
T Consensus         1 ~~~~~~~lg~G~~g~V~~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~-~   66 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWS-------------VTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSAL-D   66 (372)
T ss_pred             CCcccceeeeCCCEEEEE-------------EEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHh-h
Confidence            467779999999999999             7653 688999999864322  2234 88999999999999999999 9


Q ss_pred             eEeeCC-----eEEEEEEecCCCCCccccccC
Q 043820          233 VVIRPG-----YKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       233 ~~~~~~-----~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ++...+     ..+ +|+||+. ++|.+++..
T Consensus        67 ~~~~~~~~~~~~~~-lv~e~~~-~~l~~~~~~   96 (372)
T cd07853          67 ILQPPHIDPFEEIY-VVTELMQ-SDLHKIIVS   96 (372)
T ss_pred             eecCCCccccceEE-EEeeccc-cCHHHHHhc
Confidence            887765     566 9999997 578777754

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.83  E-value=5.6e-09  Score=95.24  Aligned_cols=90  Identities=11%  Similarity=0.065  Sum_probs=76.4

Q ss_pred             ccCccccceecccCccceeccccccccccccceee-cCCCcEEEEEEccCCCCchh-H-HHHHHHHhhhCCCCccceecc
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGA-RIDARVVAARIVFAGSVTGI-F-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~-~~~~~~vAvK~l~~~~~~~~-~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      .+.|.+..+||.|.-++||+             +. .+.+..||||+++-...... . ..+|+..|+.++||||++.+ 
T Consensus        25 ~~~YeL~e~IG~G~sa~V~~-------------A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~-   90 (516)
T KOG0582|consen   25 AKDYELQEVIGVGASAVVYL-------------ARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYH-   90 (516)
T ss_pred             ccceeEEEEEeccceeEeee-------------eeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEE-
Confidence            35677779999999999999             54 55679999999986544444 4 99999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      -.+..+.+.+ +||.||.+||+.+.+..
T Consensus        91 ~sFvv~~~LW-vVmpfMa~GS~ldIik~  117 (516)
T KOG0582|consen   91 CSFVVDSELW-VVMPFMAGGSLLDIIKT  117 (516)
T ss_pred             EEEEecceeE-EeehhhcCCcHHHHHHH
Confidence            7777788888 99999999999998864

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=98.83  E-value=6.6e-09  Score=90.38  Aligned_cols=92  Identities=20%  Similarity=0.186  Sum_probs=75.3

Q ss_pred             HhccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhHHHHHHHHhhhC-CCCccceec
Q 043820          153 NATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIFFARSVTEVAKI-YARSRPRSY  230 (282)
Q Consensus       153 ~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l-~H~nlv~l~  230 (282)
                      .++++|...+.||+|+||.||+             +... .+..+++|.+.........|.+|+.++.++ .|+|+++++
T Consensus         3 ~~~~~y~~~~~l~~g~~~~v~~-------------~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~   69 (275)
T cd06608           3 DPTGIFELVEVIGEGTYGKVYK-------------ARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFY   69 (275)
T ss_pred             CchhheeheeeecCCCCeEEEE-------------EEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEE
Confidence            4678899999999999999999             7754 467899999865433222299999999999 799999999


Q ss_pred             cceEeeCCe------EEEEEEecCCCCCccccccC
Q 043820          231 PSVVIRPGY------KVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       231 ~g~~~~~~~------~~~lv~Ey~~~GsL~~~l~~  259 (282)
                       +++.....      .+ ++|||+++++|.+++..
T Consensus        70 -~~~~~~~~~~~~~~~~-lv~e~~~~~~L~~~~~~  102 (275)
T cd06608          70 -GAFIKKNPPGNDDQLW-LVMELCGGGSVTDLVKG  102 (275)
T ss_pred             -EEEEecCCCCcceEEE-EEEEcCCCCcHHHHHHH
Confidence             99876443      56 99999999999988764

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=98.82  E-value=5.7e-09  Score=92.92  Aligned_cols=84  Identities=14%  Similarity=0.060  Sum_probs=71.8

Q ss_pred             cceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccceEeeCC
Q 043820          161 NNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSVVIRPG  238 (282)
Q Consensus       161 ~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~~~~~~  238 (282)
                      ...||+|+||.||+             +... ++..||+|.+........+ +.+|+.++..++|+|+++++ +.+..++
T Consensus        26 ~~~ig~g~~g~v~~-------------~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~-~~~~~~~   91 (297)
T cd06659          26 YIKIGEGSTGIVCI-------------AREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMY-KSYLVGE   91 (297)
T ss_pred             hhhcCCCCceeEEE-------------EEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhh-hheeeCC
Confidence            36899999999999             7643 5889999998654444445 99999999999999999999 9998888


Q ss_pred             eEEEEEEecCCCCCccccccC
Q 043820          239 YKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       239 ~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ..+ +++||+++++|.+++..
T Consensus        92 ~~~-iv~e~~~~~~L~~~~~~  111 (297)
T cd06659          92 ELW-VLMEFLQGGALTDIVSQ  111 (297)
T ss_pred             eEE-EEEecCCCCCHHHHHhh
Confidence            888 99999999999987743

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=98.82  E-value=4.9e-09  Score=90.53  Aligned_cols=85  Identities=21%  Similarity=0.310  Sum_probs=72.2

Q ss_pred             cccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH---HHHHHHHhhhCCCCccceeccceE
Q 043820          159 SINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF---FARSVTEVAKIYARSRPRSYPSVV  234 (282)
Q Consensus       159 ~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~---f~~e~~~l~~l~H~nlv~l~~g~~  234 (282)
                      ...+.||+|+||.||+             +... ++..+|+|.+.........   ..+|+..+.+++|+||+++. +..
T Consensus         2 ~~~~~lg~G~~g~v~~-------------~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~-~~~   67 (260)
T PF00069_consen    2 RLVKKLGSGGFGTVYK-------------AKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQIL-DVF   67 (260)
T ss_dssp             EEEEEEEEESSEEEEE-------------EEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEE-EEE
T ss_pred             EEeEEEEeCCCEEEEE-------------EEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccc-ccc
Confidence            4568999999999999             7765 4678999999765433332   45699999999999999999 999


Q ss_pred             eeCCeEEEEEEecCCCCCcccccc
Q 043820          235 IRPGYKVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       235 ~~~~~~~~lv~Ey~~~GsL~~~l~  258 (282)
                      ......+ ++|||+++++|.++|.
T Consensus        68 ~~~~~~~-~v~~~~~~~~L~~~l~   90 (260)
T PF00069_consen   68 QDDNYLY-IVMEYCPGGSLQDYLQ   90 (260)
T ss_dssp             EESSEEE-EEEEEETTEBHHHHHH
T ss_pred             ccccccc-cccccccccccccccc
Confidence            9988888 9999999999999987

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=98.82  E-value=6.4e-09  Score=90.14  Aligned_cols=92  Identities=23%  Similarity=0.260  Sum_probs=71.5

Q ss_pred             ceecccCccceeccccccccccccceeecC--C--CcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCccceeccceEe
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARI--D--ARVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPRSYPSVVI  235 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~--~--~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~l~~g~~~  235 (282)
                      ++||+|+||.||+             |...  +  +..+|+|.+...... ..+ +.+|+.++..+.|+|+|+++ +++.
T Consensus         1 ~~ig~G~~g~v~~-------------~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~-~~~~   66 (257)
T cd05060           1 KELGHGNFGSVVK-------------GVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLI-GVCK   66 (257)
T ss_pred             CccCccCceeEEE-------------eEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEE-EEEc
Confidence            4689999999999             6532  2  368999999765443 333 99999999999999999999 9765


Q ss_pred             eCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          236 RPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       236 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                       .+..+ ++|||+++|+|.++|....   .++|..++
T Consensus        67 -~~~~~-~v~e~~~~~~L~~~l~~~~---~~~~~~~~   98 (257)
T cd05060          67 -GEPLM-LVMELAPLGPLLKYLKKRR---EIPVSDLK   98 (257)
T ss_pred             -CCceE-EEEEeCCCCcHHHHHHhCC---CCCHHHHH
Confidence             45566 9999999999999997543   34555443

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=98.82  E-value=8.3e-09  Score=89.97  Aligned_cols=90  Identities=17%  Similarity=0.204  Sum_probs=72.0

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC-----chhH-HHHHHHHhhhCCCCccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV-----TGIF-FARSVTEVAKIYARSRPR  228 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~-----~~~~-f~~e~~~l~~l~H~nlv~  228 (282)
                      .+|...+.||+|+||.||+             +... .+..||+|.+.....     .... +.+|+.++..++|+||++
T Consensus         2 ~~~~~~~~lg~g~~g~vy~-------------~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   68 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYL-------------CYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQ   68 (266)
T ss_pred             CCccccceecCCCCEEEEE-------------EEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeee
Confidence            4677889999999999999             7654 578999998853221     1223 889999999999999999


Q ss_pred             eccceEeeC--CeEEEEEEecCCCCCccccccCC
Q 043820          229 SYPSVVIRP--GYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       229 l~~g~~~~~--~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +. +++...  ...+ +++||+++++|.+++...
T Consensus        69 ~~-~~~~~~~~~~~~-l~~e~~~~~~L~~~l~~~  100 (266)
T cd06651          69 YY-GCLRDRAEKTLT-IFMEYMPGGSVKDQLKAY  100 (266)
T ss_pred             EE-EEEEcCCCCEEE-EEEeCCCCCcHHHHHHHc
Confidence            99 987653  3445 999999999999998653

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=98.82  E-value=7.3e-09  Score=104.76  Aligned_cols=93  Identities=11%  Similarity=0.163  Sum_probs=74.1

Q ss_pred             HHhccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc--hhH-HHHHHHHhhhCCCCccc
Q 043820          152 ANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT--GIF-FARSVTEVAKIYARSRP  227 (282)
Q Consensus       152 ~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~--~~~-f~~e~~~l~~l~H~nlv  227 (282)
                      ....++|.+...||+|+||.||+             +... .+..+|+|.+......  ... |..|+.++..++|||||
T Consensus         9 e~~l~~YeIl~kLG~GgFGtVYL-------------Akdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIV   75 (1021)
T PTZ00266          9 ESRLNEYEVIKKIGNGRFGEVFL-------------VKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIV   75 (1021)
T ss_pred             ccccCCEEEEEEEecCCCeEEEE-------------EEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcC
Confidence            34456788889999999999999             6644 4678999988643222  223 99999999999999999


Q ss_pred             eeccceEeeC--CeEEEEEEecCCCCCccccccC
Q 043820          228 RSYPSVVIRP--GYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       228 ~l~~g~~~~~--~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +++ +.+...  ...+ |||||+++|+|.++|..
T Consensus        76 rl~-d~f~de~~~~ly-IVMEY~~gGSL~~lL~k  107 (1021)
T PTZ00266         76 RYI-DRFLNKANQKLY-ILMEFCDAGDLSRNIQK  107 (1021)
T ss_pred             eEE-EEEEecCCCEEE-EEEeCCCCCcHHHHHHH
Confidence            999 977543  3455 99999999999998864

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=98.82  E-value=6.6e-09  Score=89.78  Aligned_cols=100  Identities=7%  Similarity=-0.014  Sum_probs=75.3

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC--chhH-HHHHHHHhhhCCCCccceeccc
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV--TGIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~--~~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      +|...+.||+|++|.||.             +... ++..+|+|.+.....  ...+ +.+|+.++.+++|+|++++. +
T Consensus         1 ~y~~~~~lg~g~~~~v~~-------------~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~-~   66 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSL-------------VRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYR-E   66 (257)
T ss_pred             CceEEEEecCCCCeEEEE-------------EEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeee-e
Confidence            356678999999999999             6644 478899999864332  2233 89999999999999999999 8


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      .+...+..++++|||+++++|.+++.... ...+++.+.
T Consensus        67 ~~~~~~~~~~lv~e~~~~~~l~~~l~~~~-~~~l~~~~~  104 (257)
T cd08223          67 SWEGEDGLLYIVMGFCEGGDLYHKLKEQK-GKLLPENQV  104 (257)
T ss_pred             eecCCCCEEEEEecccCCCcHHHHHHHhc-CCCCCHHHH
Confidence            76544433339999999999999987533 223555544

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=98.81  E-value=5.1e-09  Score=93.00  Aligned_cols=83  Identities=14%  Similarity=0.063  Sum_probs=71.3

Q ss_pred             ceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccceEeeCCe
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSVVIRPGY  239 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~~~~~~~  239 (282)
                      ..||+|+||.||+             +... ++..||+|.+........+ +.+|+..+..++|+|+++++ +.+..++.
T Consensus        28 ~~lg~g~~g~v~~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~-~~~~~~~~   93 (292)
T cd06658          28 IKIGEGSTGIVCI-------------ATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMY-NSYLVGDE   93 (292)
T ss_pred             hcccCCCCeEEEE-------------EEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHH-HheecCCe
Confidence            6799999999999             6643 5789999998654444445 99999999999999999999 99988888


Q ss_pred             EEEEEEecCCCCCccccccC
Q 043820          240 KVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       240 ~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      .+ +||||+++++|.+++..
T Consensus        94 ~~-lv~e~~~~~~L~~~~~~  112 (292)
T cd06658          94 LW-VVMEFLEGGALTDIVTH  112 (292)
T ss_pred             EE-EEEeCCCCCcHHHHHhc
Confidence            88 99999999999998743

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=98.81  E-value=5.3e-09  Score=94.21  Aligned_cols=84  Identities=15%  Similarity=0.137  Sum_probs=68.2

Q ss_pred             ceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhC-CCCccceeccceEe
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKI-YARSRPRSYPSVVI  235 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l-~H~nlv~l~~g~~~  235 (282)
                      +.||+|+||.||+             +... ++..||+|.+....   ....+ +..|..++..+ +|+||++++ +++.
T Consensus         1 ~~lg~G~~g~V~~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~-~~~~   66 (320)
T cd05590           1 RVLGKGSFGKVML-------------ARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLY-CCFQ   66 (320)
T ss_pred             CeeeeCCCeEEEE-------------EEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhcee-eEEE
Confidence            3689999999999             7654 57899999986432   12233 78888888776 799999999 9888


Q ss_pred             eCCeEEEEEEecCCCCCccccccCC
Q 043820          236 RPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       236 ~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ..+..+ +||||+++|+|.+++...
T Consensus        67 ~~~~~~-iv~Ey~~~g~L~~~i~~~   90 (320)
T cd05590          67 TPDRLF-FVMEFVNGGDLMFHIQKS   90 (320)
T ss_pred             cCCEEE-EEEcCCCCchHHHHHHHc
Confidence            888888 999999999999888653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=98.81  E-value=5.8e-09  Score=91.59  Aligned_cols=89  Identities=19%  Similarity=0.174  Sum_probs=71.3

Q ss_pred             cCccccceecccCccceeccccccccccccceeec-CCCc----EEEEEEccCCCCch-hH-HHHHHHHhhhCCCCccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDAR----VVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPR  228 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~----~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~  228 (282)
                      ++|...+.||+|+||.||+             +.. +++.    .||+|.+....... .+ +.+|+.++..++|+|+++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~-------------~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~   73 (279)
T cd05109           7 TELKKVKVLGSGAFGTVYK-------------GIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCR   73 (279)
T ss_pred             hheeeeeecCCCCCceEEE-------------EEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCce
Confidence            4567779999999999999             763 2333    58999987543333 33 999999999999999999


Q ss_pred             eccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          229 SYPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       229 l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ++ |.+.. .... +++||+++|+|.+++...
T Consensus        74 ~~-~~~~~-~~~~-l~~~~~~~g~l~~~l~~~  102 (279)
T cd05109          74 LL-GICLT-STVQ-LVTQLMPYGCLLDYVREN  102 (279)
T ss_pred             EE-EEEcC-CCcE-EEEEcCCCCCHHHHHhhc
Confidence            99 98875 4456 999999999999999754

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=98.81  E-value=6.7e-09  Score=93.42  Aligned_cols=84  Identities=11%  Similarity=0.061  Sum_probs=66.2

Q ss_pred             ceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC---chhH-HHHHH-HHhhhCCCCccceeccceEe
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV---TGIF-FARSV-TEVAKIYARSRPRSYPSVVI  235 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~---~~~~-f~~e~-~~l~~l~H~nlv~l~~g~~~  235 (282)
                      +.||+|+||.||+             +... ++..||+|.+.....   .... +..|. .++..++|+||+++. +.+.
T Consensus         1 ~~lg~G~~g~Vy~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~-~~~~   66 (321)
T cd05603           1 KVIGKGSFGKVLL-------------AKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLH-YSFQ   66 (321)
T ss_pred             CeeeeCCCEEEEE-------------EEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCcccee-eEEE
Confidence            3689999999999             7654 578999999864321   1222 55555 467889999999999 9988


Q ss_pred             eCCeEEEEEEecCCCCCccccccCC
Q 043820          236 RPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       236 ~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ..+..+ +||||+++|+|..++...
T Consensus        67 ~~~~~~-lv~e~~~~~~L~~~l~~~   90 (321)
T cd05603          67 TAEKLY-FVLDYVNGGELFFHLQRE   90 (321)
T ss_pred             cCCEEE-EEEcCCCCCCHHHHHHHc
Confidence            888888 999999999998887543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=98.81  E-value=7.5e-09  Score=93.24  Aligned_cols=84  Identities=10%  Similarity=0.041  Sum_probs=66.2

Q ss_pred             ceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHH-HhhhCCCCccceeccceEe
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVT-EVAKIYARSRPRSYPSVVI  235 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~-~l~~l~H~nlv~l~~g~~~  235 (282)
                      +.||+|+||.||+             +... ++..||+|.+....   ..... +..|.. ++..++|+||+++. +.+.
T Consensus         1 ~~lg~G~~g~V~~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~-~~~~   66 (323)
T cd05575           1 KVIGKGSFGKVLL-------------AKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLH-YSFQ   66 (323)
T ss_pred             CeeeeCCCeEEEE-------------EEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCee-EEEE
Confidence            3689999999999             7654 58899999986432   11222 555544 56789999999999 9888


Q ss_pred             eCCeEEEEEEecCCCCCccccccCC
Q 043820          236 RPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       236 ~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ..+..+ +||||+++|+|..++...
T Consensus        67 ~~~~~~-lv~e~~~~g~L~~~l~~~   90 (323)
T cd05575          67 TADKLY-FVLDYVNGGELFFHLQRE   90 (323)
T ss_pred             eCCEEE-EEEcCCCCCCHHHHHHhc
Confidence            888888 999999999999888653

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=98.81  E-value=9.6e-09  Score=90.13  Aligned_cols=88  Identities=15%  Similarity=0.198  Sum_probs=69.5

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc-hhH-HHHHHHH-hhhCCCCccceecc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT-GIF-FARSVTE-VAKIYARSRPRSYP  231 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~-~~~-f~~e~~~-l~~l~H~nlv~l~~  231 (282)
                      ++|+..+.||+|+||.||+             +... +|..||+|.++..... ... +..|+.. ++.++|+|+++++ 
T Consensus         1 ~~~~~~~~ig~g~~g~v~~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~-   66 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDK-------------MRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFY-   66 (283)
T ss_pred             CCceEEEEecccCCeEEEE-------------EEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeee-
Confidence            3677789999999999999             7654 5899999998754332 223 5566654 6667999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +.+...+..+ ++|||++ |+|.+++..
T Consensus        67 ~~~~~~~~~~-lv~e~~~-~~l~~~l~~   92 (283)
T cd06617          67 GALFREGDVW-ICMEVMD-TSLDKFYKK   92 (283)
T ss_pred             EEEecCCcEE-EEhhhhc-ccHHHHHHH
Confidence            9998888888 9999997 688877754

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.81  E-value=5.1e-09  Score=99.56  Aligned_cols=89  Identities=19%  Similarity=0.183  Sum_probs=75.7

Q ss_pred             ccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCchh---H-HHHHHHHhhhCCCCccceeccc
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVTGI---F-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~~~---~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      |.+++.||.|+-|.|-.             +.. ..|+.+|||.+........   . ..+|+.+|+-+.|||+++|+ .
T Consensus        14 wkLgkTLG~Gstg~vrl-------------akh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~Ly-d   79 (786)
T KOG0588|consen   14 WKLGKTLGKGSTGCVRL-------------AKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLY-D   79 (786)
T ss_pred             eeccccccCCCCceehh-------------hhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeee-e
Confidence            56779999999999999             654 3699999999987633222   2 89999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCCC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      ++.+..+.| ||.||+++|.|.++|....
T Consensus        80 Vwe~~~~ly-lvlEyv~gGELFdylv~kG  107 (786)
T KOG0588|consen   80 VWENKQHLY-LVLEYVPGGELFDYLVRKG  107 (786)
T ss_pred             eeccCceEE-EEEEecCCchhHHHHHhhC
Confidence            998888888 9999999999999997544

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=98.81  E-value=8.1e-09  Score=93.09  Aligned_cols=89  Identities=16%  Similarity=0.058  Sum_probs=70.5

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhCCCC-ccceec
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKIYAR-SRPRSY  230 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~H~-nlv~l~  230 (282)
                      +|...+.||+|+||.||+             +... .+..||+|.+....   ....+ +..|..++..+.|+ +|+++.
T Consensus         1 ~y~~~~~lg~G~~g~Vy~-------------~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~   67 (324)
T cd05587           1 DFNFLMVLGKGSFGKVML-------------AERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLH   67 (324)
T ss_pred             CceEEEEEeeccCeEEEE-------------EEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeE
Confidence            366678999999999999             7654 46789999986432   12233 88899999999765 588888


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                       +++...+..+ +||||+++|+|.+++...
T Consensus        68 -~~~~~~~~~~-lv~E~~~~g~L~~~~~~~   95 (324)
T cd05587          68 -SCFQTMDRLY-FVMEYVNGGDLMYHIQQV   95 (324)
T ss_pred             -EEEEcCCEEE-EEEcCCCCCcHHHHHHHc
Confidence             8877777777 999999999999888643

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=98.81  E-value=1.3e-08  Score=91.16  Aligned_cols=89  Identities=15%  Similarity=0.171  Sum_probs=75.5

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc---hhH-HHHHHHHhhhCCCCccceecc
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT---GIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~---~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      +|...+.||+|+||.||+             +... .+..+|+|.+......   ..+ +..|+.++..++|+||++++ 
T Consensus         2 ~y~~~~~ig~g~~g~vy~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~-   67 (316)
T cd05574           2 HFKKIKLLGKGDVGRVFL-------------VRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLY-   67 (316)
T ss_pred             ceEEeeeecCCccEEEEE-------------EEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhhe-
Confidence            577778999999999999             7655 4889999998754333   233 89999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +.+..+...+ +||||+++++|.+++...
T Consensus        68 ~~~~~~~~~~-lv~e~~~~~~L~~~~~~~   95 (316)
T cd05574          68 ASFQTETYLC-LVMDYCPGGELFRLLQRQ   95 (316)
T ss_pred             eeeecCCEEE-EEEEecCCCCHHHHHHhC
Confidence            9998888888 999999999999998643

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=98.81  E-value=6e-09  Score=99.43  Aligned_cols=105  Identities=18%  Similarity=0.149  Sum_probs=68.8

Q ss_pred             hccCccccceecccCccceeccccccccccccce----eecCCCcEEEEEEccCCCCch--------------hH-HHHH
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTIT----GARIDARVVAARIVFAGSVTG--------------IF-FARS  214 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~----g~~~~~~~vAvK~l~~~~~~~--------------~~-f~~e  214 (282)
                      .+++|...++||+|+||.||++.......++...    ....++..||||++.......              .+ +..|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            4678999999999999999994221110000000    001235689999986432211              12 4557


Q ss_pred             HHHhhhCCCCcc-----ceeccceEee--------CCeEEEEEEecCCCCCccccccCC
Q 043820          215 VTEVAKIYARSR-----PRSYPSVVIR--------PGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       215 ~~~l~~l~H~nl-----v~l~~g~~~~--------~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +..+.+++|.++     ++++ |+|..        .+..+ |||||+++|+|.++|+..
T Consensus       223 ~~~l~~l~~~~l~~~~~~~~l-g~~~~~~~~g~~~~~~~~-LV~Ey~~~gsL~~~L~~~  279 (507)
T PLN03224        223 AYMCAKIKRNPIAAASCAEYL-GYFTSNTADGAFTKGSQW-LVWKFESDATLGDALDGK  279 (507)
T ss_pred             HHHHHHhhcccchhhhhhhhh-hhcccccccccccCCceE-EEEEcCCCCcHHHHHhhc
Confidence            777778877665     6777 77653        34567 999999999999999753

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=98.81  E-value=1.1e-08  Score=101.22  Aligned_cols=89  Identities=17%  Similarity=0.215  Sum_probs=75.2

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc---hhH-HHHHHHHhhhCCCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT---GIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~---~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ++|...++||+|+||.||+             +... .+..||+|.+......   ... +..|+.++..++|+||++++
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~-------------a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~   70 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYL-------------GRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLY   70 (669)
T ss_pred             CCEEEEEEEecCCCeEEEE-------------EEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEE
Confidence            5677889999999999999             7655 5789999998653222   123 88999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                       +.+......+ |||||+++|+|.++|..
T Consensus        71 -~~~~~~~~~~-lVmEy~~g~~L~~li~~   97 (669)
T cd05610          71 -YSLQSANNVY-LVMEYLIGGDVKSLLHI   97 (669)
T ss_pred             -EEEEECCEEE-EEEeCCCCCCHHHHHHh
Confidence             9988888888 99999999999999864

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=98.80  E-value=1.1e-08  Score=92.34  Aligned_cols=89  Identities=12%  Similarity=0.133  Sum_probs=71.5

Q ss_pred             CccccceecccCccceeccccccccccccceeec----CCCcEEEEEEccCCC----CchhH-HHHHHHHhhhC-CCCcc
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR----IDARVVAARIVFAGS----VTGIF-FARSVTEVAKI-YARSR  226 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~----~~~~~vAvK~l~~~~----~~~~~-f~~e~~~l~~l-~H~nl  226 (282)
                      +|...+.||+|+||.||+             +..    ..+..||+|.+....    ....+ +..|+.++..+ +|+||
T Consensus         1 ~y~~~~~lg~G~~g~Vy~-------------~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i   67 (332)
T cd05614           1 NFELLKVLGTGAYGKVFL-------------VRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFL   67 (332)
T ss_pred             CceEEEEEeecCCEEEEE-------------EEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCc
Confidence            366779999999999998             442    357899999986421    12223 88899999999 58999


Q ss_pred             ceeccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          227 PRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       227 v~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +++. +.....+..+ +||||+++|+|.+++...
T Consensus        68 ~~~~-~~~~~~~~~~-lv~e~~~~g~L~~~l~~~   99 (332)
T cd05614          68 VTLH-YAFQTEAKLH-LILDYVSGGEMFTHLYQR   99 (332)
T ss_pred             ccEE-EEEecCCEEE-EEEeCCCCCcHHHHHHHc
Confidence            9999 8888777777 999999999999998653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=98.80  E-value=1e-08  Score=92.65  Aligned_cols=84  Identities=13%  Similarity=0.035  Sum_probs=68.7

Q ss_pred             ceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc---hhH-HHHHHHHhhhC-CCCccceeccceEe
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT---GIF-FARSVTEVAKI-YARSRPRSYPSVVI  235 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~---~~~-f~~e~~~l~~l-~H~nlv~l~~g~~~  235 (282)
                      +.||+|+||.||+             +... .+..+|+|.+......   ..+ +..|+.++.++ +|+||+++. +++.
T Consensus         1 ~~lG~G~~g~V~~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~-~~~~   66 (327)
T cd05617           1 RVIGRGSYAKVLL-------------VRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLH-SCFQ   66 (327)
T ss_pred             CeeeeCCCeEEEE-------------EEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEE-EEEE
Confidence            4699999999999             7654 4789999999754222   223 88999998888 699999999 9888


Q ss_pred             eCCeEEEEEEecCCCCCccccccCC
Q 043820          236 RPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       236 ~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ..+..+ +||||+++|+|..++...
T Consensus        67 ~~~~~~-lv~e~~~~~~L~~~~~~~   90 (327)
T cd05617          67 TTSRLF-LVIEYVNGGDLMFHMQRQ   90 (327)
T ss_pred             eCCEEE-EEEeCCCCCcHHHHHHHc
Confidence            888877 999999999999887543

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=98.80  E-value=1e-08  Score=92.37  Aligned_cols=89  Identities=17%  Similarity=0.096  Sum_probs=70.5

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC---chhH-HHHHHHHhhhC-CCCccceec
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV---TGIF-FARSVTEVAKI-YARSRPRSY  230 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~---~~~~-f~~e~~~l~~l-~H~nlv~l~  230 (282)
                      +|...+.||+|+||.||+             +... .+..||+|.+.....   ...+ +..|..++..+ +|++|+++.
T Consensus         1 df~~~~~lg~G~~g~Vy~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~   67 (323)
T cd05616           1 DFNFLMVLGKGSFGKVML-------------AERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLH   67 (323)
T ss_pred             CceEEEEEeeCCCeEEEE-------------EEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEE
Confidence            466678999999999999             7654 478999999875321   2223 67788888777 688999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                       +++...+..+ +||||+++|+|.+++...
T Consensus        68 -~~~~~~~~~~-lv~E~~~~g~L~~~~~~~   95 (323)
T cd05616          68 -SCFQTMDRLY-FVMEYVNGGDLMYQIQQV   95 (323)
T ss_pred             -EEEecCCEEE-EEEcCCCCCCHHHHHHHc
Confidence             8888888777 999999999999888643

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=98.79  E-value=1.3e-08  Score=91.89  Aligned_cols=86  Identities=14%  Similarity=0.182  Sum_probs=68.1

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC--chhH-HHHHHHHhhhCCCCccceeccce
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV--TGIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~--~~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      |...+.||+|+||.||+             +... ++..||+|.+.....  .... +.+|+.++..++|+||+++. ++
T Consensus         2 y~i~~~lg~G~~g~V~~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~-~~   67 (338)
T cd07859           2 YKIQEVIGKGSYGVVCS-------------AIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIK-HI   67 (338)
T ss_pred             eEEEEEEeecCCeEEEE-------------EEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeec-ce
Confidence            55678999999999999             7644 588999999864322  2233 89999999999999999999 98


Q ss_pred             EeeCC-----eEEEEEEecCCCCCccccccC
Q 043820          234 VIRPG-----YKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       234 ~~~~~-----~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +....     ..+ +||||++ ++|.+++..
T Consensus        68 ~~~~~~~~~~~~~-lv~e~~~-~~L~~~l~~   96 (338)
T cd07859          68 MLPPSRREFKDIY-VVFELME-SDLHQVIKA   96 (338)
T ss_pred             EeccCCCCCceEE-EEEecCC-CCHHHHHHh
Confidence            76433     345 9999996 689888754

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=98.79  E-value=8.7e-09  Score=92.94  Aligned_cols=88  Identities=16%  Similarity=0.063  Sum_probs=69.2

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhCC-CCccceecc
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKIY-ARSRPRSYP  231 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~-H~nlv~l~~  231 (282)
                      |...+.||+|+||.||+             +... ++..||+|.+....   ....+ +..|..++..+. |++|+++. 
T Consensus         2 f~~~~~lg~G~~g~Vy~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~-   67 (323)
T cd05615           2 FNFLMVLGKGSFGKVML-------------AERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLH-   67 (323)
T ss_pred             ceEEEEEEecCCeEEEE-------------EEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhhee-
Confidence            55668999999999999             7654 57899999987432   22234 888988888885 56777888 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +++...+..+ +||||+++|+|.+++...
T Consensus        68 ~~~~~~~~~~-lv~Ey~~~g~L~~~i~~~   95 (323)
T cd05615          68 SCFQTVDRLY-FVMEYVNGGDLMYHIQQV   95 (323)
T ss_pred             eEEecCCEEE-EEEcCCCCCcHHHHHHHc
Confidence            7777777777 999999999999988643

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=98.79  E-value=1e-08  Score=98.17  Aligned_cols=95  Identities=17%  Similarity=0.137  Sum_probs=74.7

Q ss_pred             HHHHhccCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCc--hhH-HHHHHHHhhhCCCCc
Q 043820          150 TIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVT--GIF-FARSVTEVAKIYARS  225 (282)
Q Consensus       150 el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~--~~~-f~~e~~~l~~l~H~n  225 (282)
                      +.....++|...+.||+|+||.||+             +.. .++..||+|.+......  ... +.+|+..+..++|+|
T Consensus        26 ~~~~~~~rY~i~~~LG~G~fG~Vy~-------------a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~   92 (496)
T PTZ00283         26 TAKEQAKKYWISRVLGSGATGTVLC-------------AKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFS   92 (496)
T ss_pred             cccccCCCEEEEEEEecCCCEEEEE-------------EEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCc
Confidence            4445567888889999999999999             654 46899999998654322  223 899999999999999


Q ss_pred             cceeccceEeeCC--------eEEEEEEecCCCCCccccccC
Q 043820          226 RPRSYPSVVIRPG--------YKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       226 lv~l~~g~~~~~~--------~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ++++. .......        ..+ +||||+++|+|.++|..
T Consensus        93 iv~~~-~~~~~~~~~~~~~~~~i~-lV~Ey~~~gsL~~~l~~  132 (496)
T PTZ00283         93 IVKCH-EDFAKKDPRNPENVLMIA-LVLDYANAGDLRQEIKS  132 (496)
T ss_pred             EEEee-cceecccccCcccceEEE-EEEeCCCCCcHHHHHHH
Confidence            99988 6654322        234 99999999999998864

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=98.79  E-value=5.2e-09  Score=91.42  Aligned_cols=96  Identities=15%  Similarity=0.149  Sum_probs=77.8

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC---chhH-HHHHHHHhhhCC-CCccceec
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV---TGIF-FARSVTEVAKIY-ARSRPRSY  230 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~---~~~~-f~~e~~~l~~l~-H~nlv~l~  230 (282)
                      +|...+.||+|+||.||+             +... ++..||+|.+.....   .... +.+|+.++.+++ |+||++++
T Consensus         2 ~y~~~~~lg~g~~~~vy~-------------~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~   68 (280)
T cd05581           2 DFKFGKIIGEGSFSTVVL-------------AKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLY   68 (280)
T ss_pred             CceEeeeecCCCceEEEE-------------EEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHH
Confidence            567778999999999999             7755 588999999865321   2233 889999999998 99999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCc
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPD  270 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~  270 (282)
                       +.+..++..+ ++|||+++++|.+++....   .++|..
T Consensus        69 -~~~~~~~~~~-lv~e~~~~~~L~~~l~~~~---~l~~~~  103 (280)
T cd05581          69 -YTFQDEENLY-FVLEYAPNGELLQYIRKYG---SLDEKC  103 (280)
T ss_pred             -HHhcCCceEE-EEEcCCCCCcHHHHHHHcC---CCCHHH
Confidence             9988888888 9999999999999986543   355543

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=98.78  E-value=1e-08  Score=92.12  Aligned_cols=97  Identities=19%  Similarity=0.174  Sum_probs=75.3

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc---hhH-HHHHHHHhhhCCCCccceeccc
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT---GIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~---~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      |...+.||+|+||.||+             +... ++..+|+|.+......   ... +.+|+.++..++|+|+++++ +
T Consensus        27 f~~~~~lg~G~~~~v~~-------------~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~-~   92 (317)
T cd06635          27 FTDLREIGHGSFGAVYF-------------ARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYK-G   92 (317)
T ss_pred             hhhhheeccCCCeEEEE-------------EEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEE-E
Confidence            55568999999999999             7654 5789999998643222   223 88999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      ++......+ +||||++ |+|.+.+....  ..++|.++.
T Consensus        93 ~~~~~~~~~-lv~e~~~-g~l~~~~~~~~--~~l~~~~~~  128 (317)
T cd06635          93 CYLREHTAW-LVMEYCL-GSASDLLEVHK--KPLQEVEIA  128 (317)
T ss_pred             EEeeCCeEE-EEEeCCC-CCHHHHHHHhc--CCCCHHHHH
Confidence            999888888 9999997 57777765332  246666553

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=98.78  E-value=1.1e-08  Score=89.75  Aligned_cols=83  Identities=17%  Similarity=0.116  Sum_probs=68.7

Q ss_pred             ecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhCCCCccceeccceEeeCC
Q 043820          164 LGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKIYARSRPRSYPSVVIRPG  238 (282)
Q Consensus       164 lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~H~nlv~l~~g~~~~~~  238 (282)
                      ||+|+||.||+             +... ++..+|+|.+....   ..... +.+|+.++..++|+|++++. +.+...+
T Consensus         1 lg~g~~g~vy~-------------~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~-~~~~~~~   66 (277)
T cd05577           1 LGKGGFGEVCA-------------CQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLA-YAFETKD   66 (277)
T ss_pred             CCCCCceeEEE-------------EEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeee-eEEecCC
Confidence            68999999999             6543 58899999986432   12233 88999999999999999999 9888888


Q ss_pred             eEEEEEEecCCCCCccccccCCC
Q 043820          239 YKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       239 ~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      ..+ +||||+++++|.+++....
T Consensus        67 ~~~-lv~e~~~~~~L~~~l~~~~   88 (277)
T cd05577          67 DLC-LVMTLMNGGDLKYHIYNVG   88 (277)
T ss_pred             eEE-EEEecCCCCcHHHHHHHcC
Confidence            777 9999999999999987543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=98.78  E-value=1.5e-08  Score=87.04  Aligned_cols=96  Identities=14%  Similarity=0.208  Sum_probs=78.0

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC--chhH-HHHHHHHhhhCCCCccceeccce
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV--TGIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~--~~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      |+..+.||+|++|.+|+             +... .+..+++|.+.....  .... +.+|+.++.+++|+|++++. ++
T Consensus         2 y~~~~~l~~g~~~~v~~-------------~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~-~~   67 (254)
T cd06627           2 YQLGDLIGRGAFGVVYK-------------GLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYI-GS   67 (254)
T ss_pred             ceeeeEEcccCCeEEEE-------------EEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEE-EE
Confidence            55668999999999999             7654 578999999876543  2233 99999999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      +...+..+ +++||+++++|.+++....   .++|..+
T Consensus        68 ~~~~~~~~-~v~e~~~~~~L~~~~~~~~---~l~~~~~  101 (254)
T cd06627          68 IETSDSLY-IILEYAENGSLRQIIKKFG---PFPESLV  101 (254)
T ss_pred             EEeCCEEE-EEEecCCCCcHHHHHHhcc---CCCHHHH
Confidence            88888777 9999999999999886432   3555544

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=98.78  E-value=1.6e-08  Score=89.89  Aligned_cols=83  Identities=14%  Similarity=0.073  Sum_probs=71.6

Q ss_pred             ceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccceEeeCCe
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSVVIRPGY  239 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~~~~~~~  239 (282)
                      .+||+|+||.||+             +... ++..||+|.+......... +.+|+.++..++|+|+++++ +.+..++.
T Consensus        26 ~~lg~g~~g~v~~-------------~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~-~~~~~~~~   91 (292)
T cd06657          26 IKIGEGSTGIVCI-------------ATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMY-NSYLVGDE   91 (292)
T ss_pred             HHcCCCCCeEEEE-------------EEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhhee-eEEEeCCE
Confidence            6799999999999             7654 6889999998654444445 99999999999999999999 99998888


Q ss_pred             EEEEEEecCCCCCccccccC
Q 043820          240 KVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       240 ~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      .+ ++|||+++++|.+++..
T Consensus        92 ~~-lv~e~~~~~~L~~~~~~  110 (292)
T cd06657          92 LW-VVMEFLEGGALTDIVTH  110 (292)
T ss_pred             EE-EEEecCCCCcHHHHHhc
Confidence            88 99999999999988743

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=98.78  E-value=1.3e-08  Score=89.40  Aligned_cols=88  Identities=16%  Similarity=0.123  Sum_probs=72.8

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc--hhH-HHHHHHHhhhCCCCccceeccc
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT--GIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~--~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      +|+..+.||+|+||.||+             +... ++..||+|.+......  ..+ +.+|+.++..++|+|+++++ +
T Consensus         2 ~y~~~~~i~~g~~~~v~~-------------~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~-~   67 (288)
T cd07833           2 KYEVLGVVGEGAYGVVLK-------------CRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLK-E   67 (288)
T ss_pred             ceeEEEEecccCCeeEEE-------------EEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehh-h
Confidence            567779999999999999             7765 4789999988653222  224 99999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ++..++..+ ++|||++++.|..++..
T Consensus        68 ~~~~~~~~~-iv~e~~~~~~l~~~~~~   93 (288)
T cd07833          68 AFRRKGRLY-LVFEYVERTLLELLEAS   93 (288)
T ss_pred             eEEECCEEE-EEEecCCCCHHHHHHhc
Confidence            999888888 99999999877766543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=98.77  E-value=8.5e-09  Score=89.21  Aligned_cols=95  Identities=17%  Similarity=0.231  Sum_probs=74.5

Q ss_pred             CccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccceEe
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSVVI  235 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~~~  235 (282)
                      +|...+.||+|+||.||+             +.. .+..+|+|.+....  ... |.+|+.++..++|+|+++++ +.+.
T Consensus         7 ~~~~~~~lg~g~~g~v~~-------------~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~-~~~~   69 (254)
T cd05083           7 KLTLGEIIGEGEFGAVLQ-------------GEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLL-GVIL   69 (254)
T ss_pred             HceeeeeeccCCCCceEe-------------ccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEE-EEEc
Confidence            466779999999999999             764 56789999886422  234 99999999999999999999 9876


Q ss_pred             eCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          236 RPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       236 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      .. ..+ ++|||+++|+|.+++..... ..+++..+
T Consensus        70 ~~-~~~-~v~e~~~~~~L~~~l~~~~~-~~~~~~~~  102 (254)
T cd05083          70 HN-GLY-IVMELMSKGNLVNFLRTRGR-ALVSVIQL  102 (254)
T ss_pred             CC-CcE-EEEECCCCCCHHHHHHhcCc-CCCCHHHH
Confidence            54 456 99999999999999875432 23555544

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=98.77  E-value=7.1e-09  Score=92.44  Aligned_cols=89  Identities=22%  Similarity=0.255  Sum_probs=70.0

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CC----cEEEEEEccCCCCchh-H-HHHHHHHhhhCCCCccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DA----RVVAARIVFAGSVTGI-F-FARSVTEVAKIYARSRPR  228 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~----~~vAvK~l~~~~~~~~-~-f~~e~~~l~~l~H~nlv~  228 (282)
                      .+|...+.||+|+||.||+             +... ++    ..||+|.+........ . +.+|+.++..++|+||++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~-------------~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~   73 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYK-------------GIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR   73 (303)
T ss_pred             hhceeccccccCCCccEEE-------------EEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCccc
Confidence            3456668999999999999             7643 23    2579998875433332 3 899999999999999999


Q ss_pred             eccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          229 SYPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       229 l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ++ |.+... ..+ +++||+++|+|.+++...
T Consensus        74 ~~-~~~~~~-~~~-~v~e~~~~g~l~~~~~~~  102 (303)
T cd05110          74 LL-GVCLSP-TIQ-LVTQLMPHGCLLDYVHEH  102 (303)
T ss_pred             EE-EEEcCC-Cce-eeehhcCCCCHHHHHHhc
Confidence            99 988654 456 899999999999998654

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=98.77  E-value=1.1e-08  Score=92.03  Aligned_cols=84  Identities=13%  Similarity=0.025  Sum_probs=65.8

Q ss_pred             ceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhh-CCCCccceeccceEe
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAK-IYARSRPRSYPSVVI  235 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~-l~H~nlv~l~~g~~~  235 (282)
                      +.||+|+||.||+             +... .+..||+|.+....   ....+ +..|..++.. .+|+||++++ +.+.
T Consensus         1 ~~lG~G~~g~Vy~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~-~~~~   66 (316)
T cd05592           1 KVLGKGSFGKVML-------------AELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLF-CTFQ   66 (316)
T ss_pred             CeeeeCCCeEEEE-------------EEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCcccee-eEEE
Confidence            3689999999999             7654 47889999986432   12223 5666666664 4899999999 9988


Q ss_pred             eCCeEEEEEEecCCCCCccccccCC
Q 043820          236 RPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       236 ~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      .++..+ +||||+++|+|..++...
T Consensus        67 ~~~~~~-lv~e~~~gg~L~~~~~~~   90 (316)
T cd05592          67 TKEHLF-FVMEYLNGGDLMFHIQSS   90 (316)
T ss_pred             cCCEEE-EEEcCCCCCcHHHHHHHc
Confidence            888888 999999999999888643

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=98.77  E-value=1.5e-08  Score=88.01  Aligned_cols=82  Identities=16%  Similarity=0.067  Sum_probs=69.5

Q ss_pred             ecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC---chhH-HHHHHHHhhhCCCCccceeccceEeeCC
Q 043820          164 LGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV---TGIF-FARSVTEVAKIYARSRPRSYPSVVIRPG  238 (282)
Q Consensus       164 lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~---~~~~-f~~e~~~l~~l~H~nlv~l~~g~~~~~~  238 (282)
                      ||.|+||.||+             +... .+..+|+|.+.....   ...+ +.+|+.++..++|+||++++ +.+..+.
T Consensus         1 lg~g~~~~v~~-------------~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~-~~~~~~~   66 (262)
T cd05572           1 LGVGGFGRVEL-------------VKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLY-RTFKDKK   66 (262)
T ss_pred             CCCCCceEEEE-------------EEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeee-eeEEcCC
Confidence            68999999999             7765 478999999865332   2234 99999999999999999999 9988888


Q ss_pred             eEEEEEEecCCCCCccccccCC
Q 043820          239 YKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       239 ~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ..+ +++||+++|+|.++|...
T Consensus        67 ~~~-lv~e~~~~~~L~~~l~~~   87 (262)
T cd05572          67 YIY-MLMEYCLGGELWTILRDR   87 (262)
T ss_pred             ccE-EEEecCCCCcHHHHHhhc
Confidence            888 999999999999999754

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=98.77  E-value=1.7e-08  Score=88.67  Aligned_cols=96  Identities=19%  Similarity=0.157  Sum_probs=76.8

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC--chhH-HHHHHHHhhhCCCCccceeccce
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV--TGIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~--~~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      |...+.||+|+||.||+             +... ++..||+|.+.....  .... +.+|+.++.+++|+|+++++ +.
T Consensus         2 y~~~~~l~~g~~~~v~~-------------~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~-~~   67 (286)
T cd07832           2 YKILGRIGEGAHGIVFK-------------AKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLL-DV   67 (286)
T ss_pred             ceEEeecccCCCcEEEE-------------EEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCccee-eE
Confidence            56668999999999999             7654 588999999875432  2234 99999999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      +..+...+ +||||+ +++|.+++....  ..+++.+.
T Consensus        68 ~~~~~~~~-~v~e~~-~~~L~~~~~~~~--~~~~~~~~  101 (286)
T cd07832          68 FPHGSGFV-LVMEYM-PSDLSEVLRDEE--RPLPEAQV  101 (286)
T ss_pred             EecCCeeE-EEeccc-CCCHHHHHHhcC--CCCCHHHH
Confidence            88888888 999999 999999886543  23444433

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=98.77  E-value=1.2e-08  Score=91.94  Aligned_cols=84  Identities=11%  Similarity=0.048  Sum_probs=66.2

Q ss_pred             ceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHH-HhhhCCCCccceeccceEe
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVT-EVAKIYARSRPRSYPSVVI  235 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~-~l~~l~H~nlv~l~~g~~~  235 (282)
                      +.||+|+||.||+             +... ++..+|+|.+....   ..... +..|.. ++..++|+||++++ +.+.
T Consensus         1 ~~lG~G~~g~V~~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~-~~~~   66 (325)
T cd05604           1 KVIGKGSFGKVLL-------------AKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLH-YSFQ   66 (325)
T ss_pred             CceeeCCCeEEEE-------------EEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEE-EEEe
Confidence            3689999999999             6643 58899999986432   12223 556654 56779999999999 9988


Q ss_pred             eCCeEEEEEEecCCCCCccccccCC
Q 043820          236 RPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       236 ~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ..+..+ +||||+++|+|..++...
T Consensus        67 ~~~~~~-lv~e~~~~~~L~~~l~~~   90 (325)
T cd05604          67 TTEKLY-FVLDFVNGGELFFHLQRE   90 (325)
T ss_pred             cCCEEE-EEEcCCCCCCHHHHHHHc
Confidence            888888 999999999998888643

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=98.76  E-value=1.8e-08  Score=87.81  Aligned_cols=88  Identities=17%  Similarity=0.258  Sum_probs=69.8

Q ss_pred             CccccceecccCccceeccccccccccccceeecCC--CcEEEEEEccCCC----------CchhH-HHHHHHHhhh-CC
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARID--ARVVAARIVFAGS----------VTGIF-FARSVTEVAK-IY  222 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~--~~~vAvK~l~~~~----------~~~~~-f~~e~~~l~~-l~  222 (282)
                      +|+..+.||+|+||.||+             +....  +..+|+|.+....          ..... +..|+.++.+ ++
T Consensus         1 ~y~~~~~ig~G~~~~v~~-------------~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~   67 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYK-------------VRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLR   67 (269)
T ss_pred             CchhhhhhcCCCCceEEE-------------EEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCC
Confidence            356668999999999999             76544  6789999875321          11122 7788888765 79


Q ss_pred             CCccceeccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          223 ARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       223 H~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      |+||++++ +.+...+..+ ++|||+++++|.+++..
T Consensus        68 h~~i~~~~-~~~~~~~~~~-lv~e~~~~~~l~~~l~~  102 (269)
T cd08528          68 HPNIVRYY-KTFLENDRLY-IVMDLIEGAPLGEHFNS  102 (269)
T ss_pred             CCCeeeEE-eeEccCCeEE-EEEecCCCCcHHHHHHH
Confidence            99999999 9999888888 99999999999988743

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=98.76  E-value=3.8e-09  Score=93.32  Aligned_cols=91  Identities=16%  Similarity=0.176  Sum_probs=69.5

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchh--H-HHHHHHHhhhCCCCccceec
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGI--F-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~--~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      .++|...+.|++|.||.||+             +... .+..||+|+++-.....-  - -++|+.+|.+++|||||.+.
T Consensus        75 v~efe~lnrI~EGtyGiVYR-------------akdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vk  141 (419)
T KOG0663|consen   75 VEEFEKLNRIEEGTYGVVYR-------------AKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVK  141 (419)
T ss_pred             HHHHHHHhhcccCcceeEEE-------------eccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeE
Confidence            34567779999999999999             7654 468899999975332111  1 68999999999999999998


Q ss_pred             cceEeeC--CeEEEEEEecCCCCCccccccCCC
Q 043820          231 PSVVIRP--GYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       231 ~g~~~~~--~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                       .+....  +..+ +|||||+. ||...|....
T Consensus       142 -EVVvG~~~d~iy-~VMe~~Eh-DLksl~d~m~  171 (419)
T KOG0663|consen  142 -EVVVGSNMDKIY-IVMEYVEH-DLKSLMETMK  171 (419)
T ss_pred             -EEEeccccceee-eeHHHHHh-hHHHHHHhcc
Confidence             766542  3456 99999996 7887776544

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.76  E-value=1.6e-08  Score=92.94  Aligned_cols=87  Identities=17%  Similarity=0.250  Sum_probs=68.4

Q ss_pred             ccCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCc-----------h---hH-HHHHHHHh
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVT-----------G---IF-FARSVTEV  218 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~-----------~---~~-f~~e~~~l  218 (282)
                      .++|.+...||+|.||.|-+             +.. .++..||+|++++....           .   .+ ..+|+.+|
T Consensus        96 lNqy~l~~eiG~G~yGkVkL-------------ar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIail  162 (576)
T KOG0585|consen   96 LNQYELIKEIGSGQYGKVKL-------------ARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAIL  162 (576)
T ss_pred             hhheehhhhhcCCccceEEE-------------EeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHH
Confidence            35688889999999999999             654 36899999999753211           1   13 78999999


Q ss_pred             hhCCCCccceeccceEeeCC--eEEEEEEecCCCCCcccc
Q 043820          219 AKIYARSRPRSYPSVVIRPG--YKVGLILELKPDPDPNPD  256 (282)
Q Consensus       219 ~~l~H~nlv~l~~g~~~~~~--~~~~lv~Ey~~~GsL~~~  256 (282)
                      ++++|+|||+|+ .+-.++.  ..| ||+|||..|.+...
T Consensus       163 Kkl~H~nVV~Li-EvLDDP~s~~~Y-lVley~s~G~v~w~  200 (576)
T KOG0585|consen  163 KKLHHPNVVKLI-EVLDDPESDKLY-LVLEYCSKGEVKWC  200 (576)
T ss_pred             HhcCCcCeeEEE-EeecCcccCceE-EEEEeccCCccccC
Confidence            999999999999 7765533  345 99999999987654

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=98.76  E-value=2.3e-08  Score=86.41  Aligned_cols=98  Identities=16%  Similarity=0.219  Sum_probs=73.9

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc--hhH-HHHHHHHhhhCCCCccceeccce
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT--GIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~--~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      |+..+.||.|+||.||+             +... ++..+|+|.+......  ..+ +..|+.+++.++|+|+++++ +.
T Consensus         2 y~~~~~lg~g~~~~v~~-------------~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~-~~   67 (265)
T cd08217           2 YEVLETIGKGSFGTVRK-------------VRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYY-DR   67 (265)
T ss_pred             ceeeeeeccCCCeEEEE-------------eeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceee-ee
Confidence            55668999999999999             6543 5789999998643322  233 89999999999999999999 87


Q ss_pred             Eee--CCeEEEEEEecCCCCCccccccCCCC-CcCCCCCc
Q 043820          234 VIR--PGYKVGLILELKPDPDPNPDRLHSSR-VRSLQYPD  270 (282)
Q Consensus       234 ~~~--~~~~~~lv~Ey~~~GsL~~~l~~~~~-~~~l~W~~  270 (282)
                      +..  +...+ ++|||+++++|.+++....+ ...++|..
T Consensus        68 ~~~~~~~~~~-~~~e~~~~~~L~~~l~~~~~~~~~l~~~~  106 (265)
T cd08217          68 IIDRSNQTLY-IVMEYCEGGDLAQLIQKCKKERKYIEEEF  106 (265)
T ss_pred             eecCCCCEEE-EEehhccCCCHHHHHHHHhhcccCCCHHH
Confidence            654  23345 99999999999999864321 23455543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.75  E-value=4.3e-09  Score=92.51  Aligned_cols=95  Identities=13%  Similarity=0.039  Sum_probs=78.3

Q ss_pred             CHHHHHHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH-HHHHHHHhhhC-CCC
Q 043820          147 ELATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF-FARSVTEVAKI-YAR  224 (282)
Q Consensus       147 ~~~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l-~H~  224 (282)
                      ++.++-.-|+     +.||+|+++.|-.+            ..+..|.++|||++.+.....+. ..+|+.++.+. .|+
T Consensus        74 ~F~d~YkLt~-----e~LGeGAyasVqtc------------v~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~  136 (463)
T KOG0607|consen   74 KFEDMYKLTS-----ELLGEGAYASVQTC------------VSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHK  136 (463)
T ss_pred             hHHHHHHhHH-----HHhcCccceeeeee------------eeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCc
Confidence            3455555554     78999999999872            23567899999999887776666 99999999888 699


Q ss_pred             ccceeccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          225 SRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       225 nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ||+.|+ .+..+....| ||||-|.+|.|..+|...
T Consensus       137 nilqLi-efFEdd~~FY-LVfEKm~GGplLshI~~~  170 (463)
T KOG0607|consen  137 NILQLI-EFFEDDTRFY-LVFEKMRGGPLLSHIQKR  170 (463)
T ss_pred             cHHHHH-HHhcccceEE-EEEecccCchHHHHHHHh
Confidence            999999 8887777777 999999999999999753

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=98.75  E-value=2.2e-08  Score=88.39  Aligned_cols=89  Identities=13%  Similarity=0.112  Sum_probs=71.8

Q ss_pred             CccccceecccCccceeccccccccccccceeec----CCCcEEEEEEccCCCC----chhH-HHHHHHHhhhC-CCCcc
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR----IDARVVAARIVFAGSV----TGIF-FARSVTEVAKI-YARSR  226 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~----~~~~~vAvK~l~~~~~----~~~~-f~~e~~~l~~l-~H~nl  226 (282)
                      +|+..+.||+|+||.||.             +..    .+|..||+|.+.....    ...+ +.+|+.++..+ +|+||
T Consensus         1 ~y~~~~~lg~G~~g~v~~-------------~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i   67 (290)
T cd05613           1 NFELLKVLGTGAYGKVFL-------------VRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL   67 (290)
T ss_pred             CceeeeeeccCCcceEEE-------------EEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCCh
Confidence            356668999999999999             543    3678999999864321    2223 88999999999 69999


Q ss_pred             ceeccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          227 PRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       227 v~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +++. +++..+...+ +|+||+++|+|.++|...
T Consensus        68 ~~~~-~~~~~~~~~~-lv~e~~~~~~L~~~l~~~   99 (290)
T cd05613          68 VTLH-YAFQTDTKLH-LILDYINGGELFTHLSQR   99 (290)
T ss_pred             hcee-eEeecCCeEE-EEEecCCCCcHHHHHHHc
Confidence            9999 8887777777 999999999999998643

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=98.75  E-value=1.5e-08  Score=91.30  Aligned_cols=84  Identities=8%  Similarity=0.025  Sum_probs=65.7

Q ss_pred             ceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHH-HHhhhCCCCccceeccceEe
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSV-TEVAKIYARSRPRSYPSVVI  235 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~-~~l~~l~H~nlv~l~~g~~~  235 (282)
                      +.||+|+||.||+             +... ++..+|+|.+....   ..... +..|. .++..++|+||++++ +.+.
T Consensus         1 ~~lg~G~fg~V~~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~-~~~~   66 (325)
T cd05602           1 KVIGKGSFGKVLL-------------ARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLH-FSFQ   66 (325)
T ss_pred             CeeeeCCCeEEEE-------------EEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCcee-EEEE
Confidence            3689999999999             7654 57889999986432   12222 44444 456788999999999 9988


Q ss_pred             eCCeEEEEEEecCCCCCccccccCC
Q 043820          236 RPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       236 ~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ..+..+ +||||+++|+|.+++...
T Consensus        67 ~~~~~~-lv~e~~~~~~L~~~~~~~   90 (325)
T cd05602          67 TADKLY-FVLDYINGGELFYHLQRE   90 (325)
T ss_pred             cCCeEE-EEEeCCCCCcHHHHHHhc
Confidence            888888 999999999999988653

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=98.74  E-value=1.5e-08  Score=89.01  Aligned_cols=98  Identities=20%  Similarity=0.184  Sum_probs=76.4

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC--chhH-HHHHHHHhhhCCCCccceeccce
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV--TGIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~--~~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      |+..+.||.|++|.||+             +... ++..||+|.+.....  ...+ +.+|+..+..++|+|+++++ +.
T Consensus         1 y~~~~~l~~g~~~~vy~-------------~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~-~~   66 (283)
T cd07835           1 YQKVEKIGEGTYGVVYK-------------ARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLL-DV   66 (283)
T ss_pred             CchheEecCCCCeEEEE-------------EEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHh-he
Confidence            34458899999999999             7654 689999999864332  2224 88999999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      +..++..+ ++|||++ ++|.+++..... ..++|..++
T Consensus        67 ~~~~~~~~-iv~e~~~-~~l~~~~~~~~~-~~~~~~~~~  102 (283)
T cd07835          67 VHSENKLY-LVFEFLD-LDLKKYMDSSPL-TGLDPPLIK  102 (283)
T ss_pred             eccCCeEE-EEEeccC-cCHHHHHhhCCC-CCCCHHHHH
Confidence            99888888 9999995 689998865431 235555443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=98.74  E-value=3.7e-08  Score=84.16  Aligned_cols=96  Identities=19%  Similarity=0.263  Sum_probs=79.0

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccceEe
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSVVI  235 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~~~  235 (282)
                      |...+.||+|++|.||+             +... ++..+++|.+......... +.+|+..+..++|+|++++. +.+.
T Consensus         2 y~~~~~l~~g~~~~v~~-------------~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~-~~~~   67 (253)
T cd05122           2 FEILEKIGKGGFGEVYK-------------ARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYY-GSYL   67 (253)
T ss_pred             ceeeeeeccCCceEEEE-------------EEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEE-EEEe
Confidence            55668999999999999             7765 5789999999765443444 99999999999999999999 9988


Q ss_pred             eCCeEEEEEEecCCCCCccccccCCCCCcCCCCCc
Q 043820          236 RPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPD  270 (282)
Q Consensus       236 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~  270 (282)
                      .....+ +++||+++++|.+++....  ..++|..
T Consensus        68 ~~~~~~-l~~e~~~~~~L~~~~~~~~--~~~~~~~   99 (253)
T cd05122          68 KKDELW-IVMEFCSGGSLKDLLKSTN--QTLTESQ   99 (253)
T ss_pred             cCCeEE-EEEecCCCCcHHHHHhhcC--CCCCHHH
Confidence            888888 9999999999999986542  2355544

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=98.74  E-value=8.5e-09  Score=100.52  Aligned_cols=91  Identities=13%  Similarity=0.173  Sum_probs=73.0

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecCCC-cEEEEEEccCCCCchhH-HHHHHHHhhhCC-CCccceec
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDA-RVVAARIVFAGSVTGIF-FARSVTEVAKIY-ARSRPRSY  230 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~-~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~-H~nlv~l~  230 (282)
                      ...+....+.|.+|||+.||.             +....+ ..+|+|++-.....+.+ ..+|+.+|+.|+ |+|||.++
T Consensus        35 g~~~v~V~~vLAEGGFa~VYl-------------a~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yi  101 (738)
T KOG1989|consen   35 GSHRVTVEKVLAEGGFAQVYL-------------AQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYI  101 (738)
T ss_pred             CCEEEEEEEEEccCCcEEEEE-------------EEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEe
Confidence            344456668999999999999             766554 99999999766666667 999999999995 99999999


Q ss_pred             cceE-ee----C--CeEEEEEEecCCCCCccccccC
Q 043820          231 PSVV-IR----P--GYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       231 ~g~~-~~----~--~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                       +.. ..    +  -+.+ |.||||++|+|-+++..
T Consensus       102 -dss~~~~~~~~~~~Evl-lLmEyC~gg~Lvd~mn~  135 (738)
T KOG1989|consen  102 -DSSAINRSSNNGVWEVL-LLMEYCKGGSLVDFMNT  135 (738)
T ss_pred             -ccccccccCCCceeEEE-eehhhccCCcHHHHHHH
Confidence             832 11    1  2445 99999999999999864

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=98.73  E-value=2.5e-08  Score=88.19  Aligned_cols=88  Identities=19%  Similarity=0.183  Sum_probs=72.1

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC--chhH-HHHHHHHhhhCCCCccceecc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV--TGIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~--~~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      ++|+..+.||+|++|.||+             +... ++..||+|.+.....  ...+ +.+|+.++..++|+|+++++ 
T Consensus         2 ~~y~~~~~l~~g~~~~v~~-------------~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~-   67 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYK-------------ARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ-   67 (294)
T ss_pred             CceEEEEEecCCCCEEEEE-------------EEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEE-
Confidence            4577779999999999999             7754 578999998864322  2223 88999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +++..++..+ +||||++ ++|.+++..
T Consensus        68 ~~~~~~~~~~-lv~e~~~-~~l~~~~~~   93 (294)
T PLN00009         68 DVVHSEKRLY-LVFEYLD-LDLKKHMDS   93 (294)
T ss_pred             EEEecCCeEE-EEEeccc-ccHHHHHHh
Confidence            9998888888 9999996 578777643

>PHA03212 serine/threonine kinase US3; Provisional

Probab=98.73  E-value=1.1e-08  Score=94.92  Aligned_cols=84  Identities=15%  Similarity=-0.012  Sum_probs=70.1

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhHHHHHHHHhhhCCCCccceeccceE
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRPRSYPSVV  234 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~nlv~l~~g~~  234 (282)
                      .+|+..+.||+|+||.||+             +... .+..||+|....     ..+.+|+.++.+++|||||+++ +++
T Consensus        92 ~~y~~~~~lg~G~~g~V~~-------------~~d~~~~~~vaiK~~~~-----~~~~~E~~il~~l~HpnIv~~~-~~~  152 (391)
T PHA03212         92 AGFSILETFTPGAEGFAFA-------------CIDNKTCEHVVIKAGQR-----GGTATEAHILRAINHPSIIQLK-GTF  152 (391)
T ss_pred             CCcEEEEEEcCCCCeEEEE-------------EEECCCCCEEEEechhh-----hhhHHHHHHHHhCCCCCCCCEe-EEE
Confidence            5688889999999999999             6643 578999996531     1288999999999999999999 999


Q ss_pred             eeCCeEEEEEEecCCCCCccccccCC
Q 043820          235 IRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       235 ~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ......+ +++|++. ++|..++...
T Consensus       153 ~~~~~~~-lv~e~~~-~~L~~~l~~~  176 (391)
T PHA03212        153 TYNKFTC-LILPRYK-TDLYCYLAAK  176 (391)
T ss_pred             EECCeeE-EEEecCC-CCHHHHHHhc
Confidence            8888888 9999986 7888887543

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=98.73  E-value=2e-08  Score=90.84  Aligned_cols=94  Identities=16%  Similarity=0.113  Sum_probs=73.9

Q ss_pred             HHHHhccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC--CchhH-HHHHHHHhhhCCCCc
Q 043820          150 TIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS--VTGIF-FARSVTEVAKIYARS  225 (282)
Q Consensus       150 el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~--~~~~~-f~~e~~~l~~l~H~n  225 (282)
                      ++...+++|+..+.||+|+||.||+             +... ++..||+|.+....  ....+ +.+|+.++..++|||
T Consensus         4 ~~~~~~~~y~~~~~ig~g~~g~v~~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpn   70 (328)
T cd07856           4 TVFEITNRYVDLQPVGMGAFGLVCS-------------ARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHEN   70 (328)
T ss_pred             ceeccccceEEEEeecccCCeEEEE-------------EEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCC
Confidence            3445678899999999999999999             7644 68899999875422  22234 889999999999999


Q ss_pred             cceeccceEeeC-CeEEEEEEecCCCCCccccccC
Q 043820          226 RPRSYPSVVIRP-GYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       226 lv~l~~g~~~~~-~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ++++. +++... ...+ +++||+. ++|.+++..
T Consensus        71 iv~~~-~~~~~~~~~~~-lv~e~~~-~~L~~~~~~  102 (328)
T cd07856          71 IISLS-DIFISPLEDIY-FVTELLG-TDLHRLLTS  102 (328)
T ss_pred             eeeEe-eeEecCCCcEE-EEeehhc-cCHHHHHhc
Confidence            99999 988664 4556 9999984 688877753

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=98.73  E-value=2.9e-08  Score=87.70  Aligned_cols=87  Identities=16%  Similarity=0.059  Sum_probs=73.5

Q ss_pred             ccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccceEe
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSVVI  235 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~~~  235 (282)
                      |...+.||+|++|.||+             +.. .++..+++|.+........+ +.+|+.++..++|+|+++++ +.+.
T Consensus        21 ~~~~~~lg~g~~g~v~~-------------~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~-~~~~   86 (285)
T cd06648          21 LDNFVKIGEGSTGIVCI-------------ATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMY-SSYL   86 (285)
T ss_pred             hhcceEeccCCCeEEEE-------------EEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEE-EEEE
Confidence            33447999999999999             764 35789999988654444445 89999999999999999999 9988


Q ss_pred             eCCeEEEEEEecCCCCCccccccC
Q 043820          236 RPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       236 ~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      .++..+ +++||+++++|.+++..
T Consensus        87 ~~~~~~-~v~e~~~~~~L~~~~~~  109 (285)
T cd06648          87 VGDELW-VVMEFLEGGALTDIVTH  109 (285)
T ss_pred             cCCeEE-EEEeccCCCCHHHHHHh
Confidence            888888 99999999999998865

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.72  E-value=3.8e-08  Score=85.72  Aligned_cols=89  Identities=17%  Similarity=0.225  Sum_probs=71.5

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC-----CchhH-HHHHHHHhhhCCCCccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS-----VTGIF-FARSVTEVAKIYARSRPR  228 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~-----~~~~~-f~~e~~~l~~l~H~nlv~  228 (282)
                      .+|...+.||+|+||.||+             +... ++..+|+|.+....     ..... +.+|+.++.+++|+||++
T Consensus         2 ~~~~~~~~lg~g~~g~v~~-------------~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~   68 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYL-------------CYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQ   68 (264)
T ss_pred             CceeeeeeEccCCCeEEEE-------------EEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcce
Confidence            4677889999999999999             7654 58899999874321     12223 899999999999999999


Q ss_pred             eccceEeeC--CeEEEEEEecCCCCCccccccC
Q 043820          229 SYPSVVIRP--GYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       229 l~~g~~~~~--~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +. +++...  ...+ +++||+++++|.+++..
T Consensus        69 ~~-~~~~~~~~~~~~-~v~e~~~~~~L~~~~~~   99 (264)
T cd06653          69 YY-GCLRDPEEKKLS-IFVEYMPGGSIKDQLKA   99 (264)
T ss_pred             EE-EEEEcCCCCEEE-EEEEeCCCCcHHHHHHH
Confidence            99 987654  3355 99999999999998864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=98.72  E-value=2.2e-08  Score=89.36  Aligned_cols=87  Identities=16%  Similarity=0.154  Sum_probs=70.7

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc---hhH-HHHHHHHhhhCCCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT---GIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~---~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ..|...+.||+|+||.||+             +... ++..||+|.+......   ... +.+|+.++..++|+|++++.
T Consensus        15 ~~y~~~~~lg~g~~g~vy~-------------~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~   81 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYF-------------ARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYK   81 (307)
T ss_pred             hhhhhheeecCCCCeEEEE-------------EEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence            3466778999999999999             7654 5889999988643222   223 88999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCcccccc
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~  258 (282)
                       |++...+..+ +|+||++ |+|.+++.
T Consensus        82 -~~~~~~~~~~-lv~e~~~-g~l~~~~~  106 (307)
T cd06607          82 -GCYLREHTAW-LVMEYCL-GSASDILE  106 (307)
T ss_pred             -EEEEeCCeEE-EEHHhhC-CCHHHHHH
Confidence             9999888888 9999998 56766664

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>PRK09188 serine/threonine protein kinase; Provisional

Probab=98.72  E-value=3.2e-08  Score=90.68  Aligned_cols=83  Identities=13%  Similarity=0.060  Sum_probs=64.1

Q ss_pred             HhccCccccceecccCccceeccccccccccccceeecC--CCcEEEEEEccCCC----Cc-hhH-HHHHHHHhhhCCCC
Q 043820          153 NATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI--DARVVAARIVFAGS----VT-GIF-FARSVTEVAKIYAR  224 (282)
Q Consensus       153 ~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~--~~~~vAvK~l~~~~----~~-~~~-f~~e~~~l~~l~H~  224 (282)
                      ...++|...+.||+|+||.||+             +...  ++..+|+|.+....    .. ..+ |.+|+.+|.+++|+
T Consensus        15 ~~~~~Y~~~~~IG~G~fg~Vy~-------------a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~   81 (365)
T PRK09188         15 ALSARFVETAVLKRDVFSTVER-------------GYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGI   81 (365)
T ss_pred             cccCCceEccEEeecCcEEEEE-------------EEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCC
Confidence            3456788889999999999999             7654  46778999875321    11 234 99999999999999


Q ss_pred             ccce-eccceEeeCCeEEEEEEecCCCCCcc
Q 043820          225 SRPR-SYPSVVIRPGYKVGLILELKPDPDPN  254 (282)
Q Consensus       225 nlv~-l~~g~~~~~~~~~~lv~Ey~~~GsL~  254 (282)
                      |++. +. .    .+..+ |||||+++++|.
T Consensus        82 ~iv~~l~-~----~~~~~-LVmE~~~G~~L~  106 (365)
T PRK09188         82 GVVPQLL-A----TGKDG-LVRGWTEGVPLH  106 (365)
T ss_pred             CCCcEEE-E----cCCcE-EEEEccCCCCHH
Confidence            9985 44 3    24456 999999999996

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=98.72  E-value=3e-08  Score=86.54  Aligned_cols=87  Identities=22%  Similarity=0.279  Sum_probs=68.1

Q ss_pred             ccccceecccCccceeccccccccccccceeecC----CCcEEEEEEccCCCCc--hhH-HHHHHHHhhhCCCCccceec
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI----DARVVAARIVFAGSVT--GIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~----~~~~vAvK~l~~~~~~--~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      |...+.||+|+||.||+             +...    .+..||+|.+......  ..+ +.+|+.++..++|+|+++++
T Consensus         1 ~~~~~~ig~g~~g~v~~-------------~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~   67 (273)
T cd05074           1 FTLGRMLGKGEFGSVRE-------------AQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLI   67 (273)
T ss_pred             CcchhcccCCCCCCEEe-------------eEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEE
Confidence            34458899999999999             7542    3678999998654322  233 89999999999999999999


Q ss_pred             cceEeeCC------eEEEEEEecCCCCCccccccC
Q 043820          231 PSVVIRPG------YKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       231 ~g~~~~~~------~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                       +.+....      ..+ +++||+++|+|.+++..
T Consensus        68 -~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~  100 (273)
T cd05074          68 -GVSLRSRAKGRLPIPM-VILPFMKHGDLHTFLLM  100 (273)
T ss_pred             -EEEccCCCCCcccceE-EEEecCCCCcHHHHHHH
Confidence             9876532      235 89999999999988754

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=98.71  E-value=2.5e-08  Score=89.73  Aligned_cols=84  Identities=13%  Similarity=0.046  Sum_probs=67.5

Q ss_pred             ceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhh-CCCCccceeccceEe
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAK-IYARSRPRSYPSVVI  235 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~-l~H~nlv~l~~g~~~  235 (282)
                      +.||+|+||.||+             +... .+..||+|.+....   ..... +..|..++.. ++|+||++++ +.+.
T Consensus         1 ~~lg~G~~g~V~~-------------~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~-~~~~   66 (316)
T cd05620           1 KVLGKGSFGKVLL-------------AELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLY-CTFQ   66 (316)
T ss_pred             CeeeeCCCeEEEE-------------EEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCee-EEEE
Confidence            4689999999999             7654 57899999986532   12233 7777777765 4899999999 9988


Q ss_pred             eCCeEEEEEEecCCCCCccccccCC
Q 043820          236 RPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       236 ~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ..+..+ +||||+++|+|..++...
T Consensus        67 ~~~~~~-lv~E~~~~g~L~~~i~~~   90 (316)
T cd05620          67 TKEHLF-FVMEFLNGGDLMFHIQDK   90 (316)
T ss_pred             eCCEEE-EEECCCCCCcHHHHHHHc
Confidence            888888 999999999999888653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=98.71  E-value=2.4e-08  Score=88.57  Aligned_cols=91  Identities=21%  Similarity=0.214  Sum_probs=72.1

Q ss_pred             HhccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC--chhH-HHHHHHHhhhCCCCccce
Q 043820          153 NATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV--TGIF-FARSVTEVAKIYARSRPR  228 (282)
Q Consensus       153 ~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~--~~~~-f~~e~~~l~~l~H~nlv~  228 (282)
                      ...++|+..+.||+|+||.||+             |... ++..||+|.++....  .... +.+|+.++..++|||+++
T Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~-------------~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~   70 (302)
T cd07864           4 RCVDKFDIIGQIGEGTYGQVYK-------------ARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVN   70 (302)
T ss_pred             hhhhhhheeeeecccCCEEEEE-------------EEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeee
Confidence            3556788889999999999999             7765 578999999864332  2223 889999999999999999


Q ss_pred             eccceEeeCC----------eEEEEEEecCCCCCccccccC
Q 043820          229 SYPSVVIRPG----------YKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       229 l~~g~~~~~~----------~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ++ +.+.+..          ..+ +++||+++ +|..++..
T Consensus        71 ~~-~~~~~~~~~~~~~~~~~~~~-lv~e~~~~-~l~~~l~~  108 (302)
T cd07864          71 LK-EIVTDKQDALDFKKDKGAFY-LVFEYMDH-DLMGLLES  108 (302)
T ss_pred             ee-heecCcchhhhccccCCcEE-EEEcccCc-cHHHHHhc
Confidence            99 9887654          556 99999986 66666654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.71  E-value=1.5e-08  Score=93.49  Aligned_cols=92  Identities=12%  Similarity=0.138  Sum_probs=73.4

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC--chhH-HHHHHHHhhhCCCCccceecc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV--TGIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~--~~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      ++|...+.+|+|+||.++.             .... +...+++|.+.-...  ...+ -..|+.++++++|||||... 
T Consensus         4 ~~Ye~~~~iG~GafG~a~l-------------vrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~-   69 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALL-------------VRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYK-   69 (426)
T ss_pred             chhhhhhhcCccccchhhh-------------hhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeec-
Confidence            3456668999999999988             4332 467899998864332  2233 89999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccCCC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      ..+.+++..++|||||++||+|.+.|..++
T Consensus        70 ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k   99 (426)
T KOG0589|consen   70 DSFEEDGQLLCIVMEYCEGGDLAQLIKEQK   99 (426)
T ss_pred             cchhcCCceEEEEEeecCCCCHHHHHHHHh
Confidence            999888884449999999999999987654

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.71  E-value=2.8e-08  Score=94.83  Aligned_cols=92  Identities=14%  Similarity=0.097  Sum_probs=73.6

Q ss_pred             HhccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhC-CCCcc
Q 043820          153 NATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKI-YARSR  226 (282)
Q Consensus       153 ~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l-~H~nl  226 (282)
                      ..-++|....+||+|+||+|+.             +.+. ++..+|||.+++..   ....+ .+.|.+++... +||-|
T Consensus       365 ~~l~~F~~l~vLGkGsFGkV~l-------------ae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL  431 (694)
T KOG0694|consen  365 LTLDDFRLLAVLGRGSFGKVLL-------------AELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFL  431 (694)
T ss_pred             ccccceEEEEEeccCcCceEEE-------------EEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeE
Confidence            3456788889999999999999             7655 47799999998753   22334 88888887776 69999


Q ss_pred             ceeccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          227 PRSYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       227 v~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ++|+ ++..+..+.+ .||||..+|++..+++.
T Consensus       432 ~~L~-~~fQT~~~l~-fvmey~~Ggdm~~~~~~  462 (694)
T KOG0694|consen  432 VNLF-SCFQTKEHLF-FVMEYVAGGDLMHHIHT  462 (694)
T ss_pred             eecc-cccccCCeEE-EEEEecCCCcEEEEEec
Confidence            9999 7777777777 99999999997766653

>PHA03211 serine/threonine kinase US3; Provisional

Probab=98.71  E-value=2.4e-08  Score=94.66  Aligned_cols=93  Identities=15%  Similarity=0.116  Sum_probs=74.8

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhHHHHHHHHhhhCCCCccceeccceEe
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRPRSYPSVVI  235 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~nlv~l~~g~~~  235 (282)
                      +|...+.||+|+||.||+             +... .+..||+|....     ..+.+|+.+|.+++|+|||+++ +++.
T Consensus       170 gy~i~~~Lg~G~~G~Vy~-------------a~~~~~~~~vavK~~~~-----~~~~~E~~iL~~L~HpnIv~l~-~~~~  230 (461)
T PHA03211        170 GFAIHRALTPGSEGCVFE-------------SSHPDYPQRVVVKAGWY-----ASSVHEARLLRRLSHPAVLALL-DVRV  230 (461)
T ss_pred             CeEEEEEEccCCCeEEEE-------------EEECCCCCEEEEecccc-----cCHHHHHHHHHHCCCCCCCcEE-EEEE
Confidence            577888999999999999             7765 478899995321     1178999999999999999999 9999


Q ss_pred             eCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          236 RPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       236 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      .++..+ +|||++. |+|.+++....  ..++|.+++
T Consensus       231 ~~~~~~-lv~e~~~-~~L~~~l~~~~--~~l~~~~~~  263 (461)
T PHA03211        231 VGGLTC-LVLPKYR-SDLYTYLGARL--RPLGLAQVT  263 (461)
T ss_pred             ECCEEE-EEEEccC-CCHHHHHHhcC--CCCCHHHHH
Confidence            888888 9999995 78888885432  246776554

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=98.71  E-value=2.3e-08  Score=87.59  Aligned_cols=96  Identities=19%  Similarity=0.145  Sum_probs=73.0

Q ss_pred             cccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchh-H-HHHHHHHhhhCC-CCccceeccceE
Q 043820          159 SINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGI-F-FARSVTEVAKIY-ARSRPRSYPSVV  234 (282)
Q Consensus       159 ~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~-~-f~~e~~~l~~l~-H~nlv~l~~g~~  234 (282)
                      ...++||+|+||.||+             +... ++..+|+|.+........ . ..+|+..+.++. |+|+++++ +.+
T Consensus         2 ~~~~~lg~g~~~~v~~-------------~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~-~~~   67 (282)
T cd07831           2 KILGKIGEGTFSEVLK-------------AQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLI-EVL   67 (282)
T ss_pred             ceEeeccccccceEEE-------------EEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceE-EEE
Confidence            4458899999999999             7654 578999999875432222 2 668888899885 99999999 998


Q ss_pred             eeC--CeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          235 IRP--GYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       235 ~~~--~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      .++  +..+ +|+||++ |+|.+++....  ..++|.+..
T Consensus        68 ~~~~~~~~~-lv~e~~~-~~l~~~l~~~~--~~~~~~~~~  103 (282)
T cd07831          68 FDRKTGRLA-LVFELMD-MNLYELIKGRK--RPLPEKRVK  103 (282)
T ss_pred             ecCCCCcEE-EEEecCC-ccHHHHHHhcc--CCCCHHHHH
Confidence            877  6777 9999997 58888876533  246665543

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=98.71  E-value=2.2e-08  Score=86.44  Aligned_cols=82  Identities=11%  Similarity=0.154  Sum_probs=69.2

Q ss_pred             ecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC---chhH-HHHHHHHhhhCCCCccceeccceEeeCC
Q 043820          164 LGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV---TGIF-FARSVTEVAKIYARSRPRSYPSVVIRPG  238 (282)
Q Consensus       164 lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~---~~~~-f~~e~~~l~~l~H~nlv~l~~g~~~~~~  238 (282)
                      ||+|+||.||+             +... .+..+++|.+.....   ...+ +.+|+.++.+++|+|++++. +.+..+.
T Consensus         1 lg~g~~~~vy~-------------~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~-~~~~~~~   66 (265)
T cd05579           1 ISKGAYGRVFL-------------AKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLY-YSFQGKK   66 (265)
T ss_pred             CCCCCceEEEE-------------EEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHH-HheecCc
Confidence            68999999999             7765 488999999865433   2333 89999999999999999999 9988888


Q ss_pred             eEEEEEEecCCCCCccccccCC
Q 043820          239 YKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       239 ~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ..+ ++|||+++++|.+++...
T Consensus        67 ~~~-lv~e~~~~~~L~~~l~~~   87 (265)
T cd05579          67 NLY-LVMEYLPGGDLASLLENV   87 (265)
T ss_pred             EEE-EEEecCCCCcHHHHHHHc
Confidence            888 999999999999988653

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=98.71  E-value=2.3e-08  Score=86.10  Aligned_cols=88  Identities=22%  Similarity=0.284  Sum_probs=72.9

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc-h-hH-HHHHHHHhhhCCCCccceeccc
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT-G-IF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~-~-~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      +|+..+.||+|+||.||+             +... ++..+++|.+...... . .. +.+|+.+++.++|+||+++. +
T Consensus         1 ~y~~~~~i~~g~~~~v~~-------------~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~-~   66 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYK-------------VKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYK-E   66 (256)
T ss_pred             CceEeeeecCCCceeEEE-------------EEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhh-h
Confidence            356678999999999999             6543 5789999998653322 2 23 88999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      .+......+ +|+||+++++|.+++..
T Consensus        67 ~~~~~~~~~-~v~e~~~~~~L~~~~~~   92 (256)
T cd08530          67 AFLDGNKLC-IVMEYAPFGDLSKAISK   92 (256)
T ss_pred             hhccCCEEE-EEehhcCCCCHHHHHHH
Confidence            988888878 99999999999999865

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=98.70  E-value=3.1e-08  Score=87.47  Aligned_cols=89  Identities=19%  Similarity=0.127  Sum_probs=70.4

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc--hhH-HHHHHHHhhhC-CCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT--GIF-FARSVTEVAKI-YARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~--~~~-f~~e~~~l~~l-~H~nlv~l~  230 (282)
                      ++|+..+.||+|+||.||+             +... ++..||+|.+......  ... +.+|+.++..+ +|+|+++++
T Consensus         1 ~~y~~~~~lg~g~~g~vy~-------------~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~   67 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYK-------------ARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLL   67 (295)
T ss_pred             CCceEeeEecccCCeEEEE-------------EEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCcccee
Confidence            3577779999999999999             7754 5889999987653322  223 88899999999 569999999


Q ss_pred             cceEeeCCe-----EEEEEEecCCCCCccccccCC
Q 043820          231 PSVVIRPGY-----KVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       231 ~g~~~~~~~-----~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                       +++...+.     .+ ++|||+++ +|.+++...
T Consensus        68 -~~~~~~~~~~~~~~~-lv~e~~~~-~l~~~~~~~   99 (295)
T cd07837          68 -DVEHVEEKNGKPSLY-LVFEYLDS-DLKKFMDSN   99 (295)
T ss_pred             -eeEeecCCCCCceEE-EEeeccCc-CHHHHHHHh
Confidence             98876555     56 99999995 898887643

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=98.70  E-value=4.4e-09  Score=91.79  Aligned_cols=87  Identities=18%  Similarity=0.234  Sum_probs=74.8

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccceEe
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSVVI  235 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~~~  235 (282)
                      |....+||+|++|.||+             +..+ .|+.||+|.++..  .+.. ...|+.+|++...+.+|+.+ |.+.
T Consensus        35 FDi~~KLGEGSYGSV~K-------------AIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYY-GSYF   98 (502)
T KOG0574|consen   35 FDIVGKLGEGSYGSVHK-------------AIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYY-GSYF   98 (502)
T ss_pred             HHHHHHhcCCcchHHHH-------------HHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhh-hhhc
Confidence            66668999999999999             6544 5899999998743  3344 89999999999999999999 9999


Q ss_pred             eCCeEEEEEEecCCCCCccccccCCC
Q 043820          236 RPGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       236 ~~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      .....+ +||||+.-||..+.++-.+
T Consensus        99 K~sDLW-IVMEYCGAGSiSDI~R~R~  123 (502)
T KOG0574|consen   99 KHSDLW-IVMEYCGAGSISDIMRARR  123 (502)
T ss_pred             cCCceE-eehhhcCCCcHHHHHHHhc
Confidence            888888 9999999999999987543

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.70  E-value=7.4e-09  Score=96.08  Aligned_cols=90  Identities=19%  Similarity=0.227  Sum_probs=71.6

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH---HHHHHHHhhhCCCCccceeccce
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF---FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~---f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      |.+.+.||+|-|..|-.             +..- .|..||||.+.+.......   +..|++.|.-++|||||+|+ .+
T Consensus        20 YDLekTlG~GHFAVVKL-------------ArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLY-EV   85 (864)
T KOG4717|consen   20 YDLEKTLGRGHFAVVKL-------------ARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLY-EV   85 (864)
T ss_pred             ehhhhhhcCCceehhhh-------------hhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeee-eh
Confidence            44558899999998876             3322 5789999999865443322   88999999999999999999 77


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccCCCC
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLHSSR  262 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~  262 (282)
                      ....-..| ||+|+-.+|+|.+||.....
T Consensus        86 iDTQTKly-LiLELGD~GDl~DyImKHe~  113 (864)
T KOG4717|consen   86 IDTQTKLY-LILELGDGGDLFDYIMKHEE  113 (864)
T ss_pred             hcccceEE-EEEEecCCchHHHHHHhhhc
Confidence            66666666 99999999999999976543

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=98.70  E-value=5.3e-09  Score=93.17  Aligned_cols=84  Identities=21%  Similarity=0.247  Sum_probs=63.8

Q ss_pred             ccccceecccCccceeccccccccccccceeecCC-CcEEEEEEccCCCCchhHHHHHHHHhhhCCCCccceeccceEee
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARID-ARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRPRSYPSVVIR  236 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~-~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~nlv~l~~g~~~~  236 (282)
                      +...+.+|.|+||.||+             |.+.. +..||||+......-   -.+|+.+|+.+.|||||+|. =+...
T Consensus        26 ~~~~~liG~GsFg~Vyq-------------~~~~e~~~~vAIKKv~~d~r~---knrEl~im~~l~HpNIV~L~-~~f~~   88 (364)
T KOG0658|consen   26 YEAVRLIGSGSFGVVYQ-------------AKLRETEEEVAIKKVLQDKRY---KNRELQIMRKLDHPNIVRLL-YFFSS   88 (364)
T ss_pred             EEeeEEEeecccceEEE-------------EEEcCCCceeEEEEecCCCCc---CcHHHHHHHhcCCcCeeeEE-EEEEe
Confidence            44558999999999999             87654 689999987543221   45799999999999999998 55443


Q ss_pred             CCeE--E--EEEEecCCCCCccccccC
Q 043820          237 PGYK--V--GLILELKPDPDPNPDRLH  259 (282)
Q Consensus       237 ~~~~--~--~lv~Ey~~~GsL~~~l~~  259 (282)
                      ..+.  +  .|||||||. +|.++++.
T Consensus        89 ~~~~d~~~lnlVleymP~-tL~~~~r~  114 (364)
T KOG0658|consen   89 STESDEVYLNLVLEYMPE-TLYRVIRH  114 (364)
T ss_pred             cCCCchhHHHHHHHhchH-HHHHHHHH
Confidence            2221  1  289999997 88888874

>PHA03209 serine/threonine kinase US3; Provisional

Probab=98.69  E-value=2.6e-08  Score=91.24  Aligned_cols=96  Identities=16%  Similarity=0.142  Sum_probs=75.9

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhHHHHHHHHhhhCCCCccceeccc
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      ...+|...+.||+|+||.||+             +... .+..||+|.....     ....|+.++.+++|+||++++ +
T Consensus        64 ~~~~y~~~~~lg~G~~g~Vy~-------------~~~~~~~~~valK~~~~~-----~~~~E~~~l~~l~h~~iv~~~-~  124 (357)
T PHA03209         64 ASLGYTVIKTLTPGSEGRVFV-------------ATKPGQPDPVVLKIGQKG-----TTLIEAMLLQNVNHPSVIRMK-D  124 (357)
T ss_pred             hhcCcEEEEEecCCCCeEEEE-------------EEECCCCceEEEEeCCcc-----ccHHHHHHHHhCCCCCCcChh-h
Confidence            445788899999999999999             7654 4678999975321     156799999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      ++...+..+ +|+||+. |+|.+++....  ..++|..+.
T Consensus       125 ~~~~~~~~~-lv~e~~~-~~l~~~l~~~~--~~~~~~~~~  160 (357)
T PHA03209        125 TLVSGAITC-MVLPHYS-SDLYTYLTKRS--RPLPIDQAL  160 (357)
T ss_pred             eEEeCCeeE-EEEEccC-CcHHHHHHhcc--CCCCHHHHH
Confidence            999988888 9999995 68888886433  246665543

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=98.69  E-value=2.3e-08  Score=87.70  Aligned_cols=97  Identities=14%  Similarity=0.129  Sum_probs=76.0

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch-hH-HHHHHHHhhhCC-CCccceeccce
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG-IF-FARSVTEVAKIY-ARSRPRSYPSV  233 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~-H~nlv~l~~g~  233 (282)
                      |+..+.||+|+||.||+             |... .+..|++|.+....... .. ..+|+..+.+++ |+|++++. +.
T Consensus         1 y~~~~~ig~g~~g~v~~-------------~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~-~~   66 (283)
T cd07830           1 YKVIKQLGDGTFGSVYL-------------ARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLK-EV   66 (283)
T ss_pred             CeeheeeccCCceEEEE-------------EEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHH-HH
Confidence            34568999999999999             8765 47889999986543322 23 678999999998 99999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      +..++..+ +||||+ +|+|.+++.... ...++|...
T Consensus        67 ~~~~~~~~-lv~e~~-~~~l~~~~~~~~-~~~~~~~~~  101 (283)
T cd07830          67 FRENDELY-FVFEYM-EGNLYQLMKDRK-GKPFSESVI  101 (283)
T ss_pred             hhcCCcEE-EEEecC-CCCHHHHHHhcc-cccCCHHHH
Confidence            99888888 999999 889998886543 124555544

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=98.68  E-value=1e-09  Score=93.22  Aligned_cols=87  Identities=18%  Similarity=0.292  Sum_probs=70.9

Q ss_pred             cCccccceecccCccceeccccccccccccceee-cCCCcEEEEEEccCCC--CchhH-HHHHHHHhhhCCCCccceecc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGA-RIDARVVAARIVFAGS--VTGIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~-~~~~~~vAvK~l~~~~--~~~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      ++|+.-+.||+|.|+.||+             .. .+.|+.+|+|.++...  ..+-+ ..+|+++-..|+|||||+|+ 
T Consensus        11 d~y~l~e~igkG~FSvVrR-------------c~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~-   76 (355)
T KOG0033|consen   11 DNYDVKEELGKGAFSVVRR-------------CVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH-   76 (355)
T ss_pred             hhhhHHHHHccCchHHHHH-------------HHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehh-
Confidence            4566668999999999999             44 3468888888886432  22334 89999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccc
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDR  257 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l  257 (282)
                      ....+....+ ||+|+|.+|+|..-|
T Consensus        77 ~ti~~~~~~y-lvFe~m~G~dl~~eI  101 (355)
T KOG0033|consen   77 DSIQEESFHY-LVFDLVTGGELFEDI  101 (355)
T ss_pred             hhhcccceeE-EEEecccchHHHHHH
Confidence            8888888888 999999999997655

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=98.67  E-value=7e-08  Score=82.87  Aligned_cols=89  Identities=17%  Similarity=0.241  Sum_probs=74.4

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC--chhH-HHHHHHHhhhCCCCccceeccc
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV--TGIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~--~~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      +|...+.||+|+||.||+             +... ++..+++|.+.....  .... +.+|++++..++|+|++++. +
T Consensus         1 ~y~~~~~l~~g~~~~v~~-------------~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~-~   66 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYL-------------VRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYY-E   66 (258)
T ss_pred             CceEEeeeccCCCeEEEE-------------EEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheE-E
Confidence            356668999999999999             7654 578999999875433  2333 99999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ....+...+ +++||+++++|.+++...
T Consensus        67 ~~~~~~~~~-lv~e~~~~~~L~~~l~~~   93 (258)
T cd08215          67 SFEEKGKLC-IVMEYADGGDLSQKIKKQ   93 (258)
T ss_pred             EEecCCEEE-EEEEecCCCcHHHHHHHh
Confidence            888887777 999999999999988653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=98.67  E-value=2.1e-08  Score=93.29  Aligned_cols=86  Identities=16%  Similarity=0.143  Sum_probs=67.8

Q ss_pred             cceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC--CchhH-HHHHHHHhhhCCCCccceeccceEee
Q 043820          161 NNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS--VTGIF-FARSVTEVAKIYARSRPRSYPSVVIR  236 (282)
Q Consensus       161 ~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~--~~~~~-f~~e~~~l~~l~H~nlv~l~~g~~~~  236 (282)
                      .+.||+|.||+||-             |..+ .|+.||||.+.+..  ...+. +.+|+.+|.+++||.||.|. -.+.+
T Consensus       569 devLGSGQFG~VYg-------------g~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le-~M~ET  634 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYG-------------GKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLE-CMFET  634 (888)
T ss_pred             HhhccCCcceeeec-------------ceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEE-EeecC
Confidence            37899999999999             7654 69999999998653  33344 99999999999999999998 44544


Q ss_pred             CCeEEEEEEecCCCCCccccccCCC
Q 043820          237 PGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       237 ~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      ++..+ +|||-+.+--|+-.|.++.
T Consensus       635 ~ervF-VVMEKl~GDMLEMILSsEk  658 (888)
T KOG4236|consen  635 PERVF-VVMEKLHGDMLEMILSSEK  658 (888)
T ss_pred             CceEE-EEehhhcchHHHHHHHhhc
Confidence            55555 9999998766666665554

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=98.67  E-value=4.9e-08  Score=88.07  Aligned_cols=84  Identities=15%  Similarity=0.124  Sum_probs=68.9

Q ss_pred             ceeccc--CccceeccccccccccccceeecC-CCcEEEEEEccCCCCch--hH-HHHHHHHhhhCCCCccceeccceEe
Q 043820          162 NKLGEG--GFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG--IF-FARSVTEVAKIYARSRPRSYPSVVI  235 (282)
Q Consensus       162 ~~lG~G--~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l~H~nlv~l~~g~~~  235 (282)
                      ..||+|  +||+||.             +... .+..||+|.+.......  .+ +.+|+.++..++|+||++++ +++.
T Consensus         4 ~~ig~g~~~~~~v~~-------------a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~-~~~~   69 (328)
T cd08226           4 VEIGRGFCNLTSVYL-------------ARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSW-TVFT   69 (328)
T ss_pred             HHhCCcccCceeEEE-------------EEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEe-eeEe
Confidence            456666  8999999             7643 68999999986543222  24 89999999999999999999 9999


Q ss_pred             eCCeEEEEEEecCCCCCccccccCC
Q 043820          236 RPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       236 ~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      .++..+ +++||+++|+|.+++...
T Consensus        70 ~~~~~~-~v~e~~~~~~l~~~l~~~   93 (328)
T cd08226          70 TGSWLW-VISPFMAYGSANSLLKTY   93 (328)
T ss_pred             cCCceE-EEEecccCCCHHHHHHhh
Confidence            888888 999999999999988653

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.65  E-value=7.3e-09  Score=94.23  Aligned_cols=89  Identities=16%  Similarity=0.171  Sum_probs=75.5

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchh-H-HHHHHHHhhhCCCCccceeccce
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGI-F-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~-~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      .|+..+.||+|+||.||+             |... .+..||+|.+.-.....+ + ...|+.++.+++++||.+.+ |.
T Consensus        14 ~~~~~~~IgrGsfG~Vyk-------------~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yy-gs   79 (467)
T KOG0201|consen   14 LYTKLELIGRGSFGEVYK-------------AIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYY-GS   79 (467)
T ss_pred             ccccchhccccccceeee-------------eeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhh-hh
Confidence            355558999999999999             7654 478999999986544443 4 99999999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccCC
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ...+.... ++||||.+|++.+.|...
T Consensus        80 yl~g~~Lw-iiMey~~gGsv~~lL~~~  105 (467)
T KOG0201|consen   80 YLKGTKLW-IIMEYCGGGSVLDLLKSG  105 (467)
T ss_pred             eeecccHH-HHHHHhcCcchhhhhccC
Confidence            99888888 999999999999988643

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=98.65  E-value=4e-08  Score=86.66  Aligned_cols=88  Identities=11%  Similarity=0.082  Sum_probs=70.7

Q ss_pred             ccccceecccCccceeccccccccccccceeec----CCCcEEEEEEccCCC----CchhH-HHHHHHHhhhC-CCCccc
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGAR----IDARVVAARIVFAGS----VTGIF-FARSVTEVAKI-YARSRP  227 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~----~~~~~vAvK~l~~~~----~~~~~-f~~e~~~l~~l-~H~nlv  227 (282)
                      |+..+.||+|+||.||+             +..    .++..+|+|.+....    ..... +.+|+.++.++ +|+|++
T Consensus         2 ~~~~~~ig~G~~~~vy~-------------~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~   68 (288)
T cd05583           2 FELLRVLGTGAYGKVFL-------------VRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLV   68 (288)
T ss_pred             ceEEEEeccCCCceEEE-------------EEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchh
Confidence            55668999999999999             542    356889999886422    11223 88999999999 699999


Q ss_pred             eeccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          228 RSYPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       228 ~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ++. +....+...+ +||||+++|+|.+++...
T Consensus        69 ~~~-~~~~~~~~~~-lv~e~~~~~~L~~~~~~~   99 (288)
T cd05583          69 TLH-YAFQTDTKLH-LILDYVNGGELFTHLYQR   99 (288)
T ss_pred             hhh-eeeecCCEEE-EEEecCCCCcHHHHHhhc
Confidence            999 8887777777 999999999999988643

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=98.65  E-value=1.7e-08  Score=94.13  Aligned_cols=94  Identities=14%  Similarity=0.173  Sum_probs=74.5

Q ss_pred             HHhccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc---hhH-HHHHHHHhhhC-CCCc
Q 043820          152 ANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT---GIF-FARSVTEVAKI-YARS  225 (282)
Q Consensus       152 ~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~---~~~-f~~e~~~l~~l-~H~n  225 (282)
                      ....++|..++.||+|+|.+|++             +... .+.++|||++.+.--.   ..+ ...|-..|..| .||.
T Consensus        69 kk~~~DF~Fg~~lGeGSYStV~~-------------A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPg  135 (604)
T KOG0592|consen   69 KKTPNDFKFGKILGEGSYSTVVL-------------AREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPG  135 (604)
T ss_pred             cCChhhcchhheeccccceeEEE-------------eeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCC
Confidence            34456788889999999999999             6644 5789999999764322   223 77888999999 9999


Q ss_pred             cceeccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          226 RPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       226 lv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      |++|+ -...+....| +|+||++||+|.++|..-
T Consensus       136 ivkLy-~TFQD~~sLY-FvLe~A~nGdll~~i~K~  168 (604)
T KOG0592|consen  136 IVKLY-FTFQDEESLY-FVLEYAPNGDLLDLIKKY  168 (604)
T ss_pred             eEEEE-EEeecccceE-EEEEecCCCcHHHHHHHh
Confidence            99999 5555555555 999999999999999754

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=98.64  E-value=6.2e-08  Score=86.87  Aligned_cols=97  Identities=16%  Similarity=0.143  Sum_probs=74.2

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc---hhH-HHHHHHHhhhCCCCccceeccc
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT---GIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~---~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      |...++||+|+||.||+             +... .+..|++|.+......   ... +.+|+.++..++|+|++++. +
T Consensus        23 ~~~~~~lg~g~~g~v~~-------------~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~-~   88 (313)
T cd06633          23 FVGLHEIGHGSFGAVYF-------------ATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYK-G   88 (313)
T ss_pred             hhcceeeccCCCeEEEE-------------EEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEE-E
Confidence            44447899999999999             7754 5789999998643222   223 88999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      ++.+....+ +||||+. |+|.+++....  ..++|....
T Consensus        89 ~~~~~~~~~-lv~e~~~-~~l~~~l~~~~--~~l~~~~~~  124 (313)
T cd06633          89 CYLKEHTAW-LVMEYCL-GSASDLLEVHK--KPLQEVEIA  124 (313)
T ss_pred             EEEeCCEEE-EEEecCC-CCHHHHHHhcC--CCCCHHHHH
Confidence            999988888 9999996 57777765332  245665443

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=98.63  E-value=4.4e-08  Score=86.05  Aligned_cols=86  Identities=20%  Similarity=0.204  Sum_probs=69.9

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc--hhH-HHHHHHHhhhCCCCccceeccce
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT--GIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~--~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      |...+.||+|+||.||+             +... .|..+|+|.+......  ... +.+|+.++..++|+|+++++ +.
T Consensus         2 y~~~~~l~~g~~~~vy~-------------~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~-~~   67 (284)
T cd07839           2 YEKLEKIGEGTYGTVFK-------------AKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLY-DV   67 (284)
T ss_pred             ceeEEEecccCCeEEEE-------------EEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHH-HH
Confidence            55568899999999999             7654 5889999998643222  123 88999999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccC
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      .......+ +++||++ ++|.+++..
T Consensus        68 ~~~~~~~~-lv~e~~~-~~l~~~~~~   91 (284)
T cd07839          68 LHSDKKLT-LVFEYCD-QDLKKYFDS   91 (284)
T ss_pred             hccCCceE-EEEecCC-CCHHHHHHh
Confidence            88888877 9999998 578777754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=98.63  E-value=7.4e-08  Score=84.38  Aligned_cols=87  Identities=18%  Similarity=0.204  Sum_probs=71.0

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC--CchhH-HHHHHHHhhhCCCCccceeccce
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS--VTGIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~--~~~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      |+..+.||+|+||.||+             +... .+..+|+|.+....  ..... +.+|+.++..++|+|++++. +.
T Consensus         1 y~~~~~l~~g~~~~vy~-------------~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~-~~   66 (287)
T cd07840           1 YEKIAQIGEGTYGQVYK-------------ARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLK-EI   66 (287)
T ss_pred             CeeeEEeccCCCeEEEE-------------EEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeehe-ee
Confidence            34558899999999999             7655 47899999997643  22233 88999999999999999999 99


Q ss_pred             EeeC--CeEEEEEEecCCCCCccccccCC
Q 043820          234 VIRP--GYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       234 ~~~~--~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +...  +..+ +|+||+++ +|.+++...
T Consensus        67 ~~~~~~~~~~-lv~e~~~~-~l~~~~~~~   93 (287)
T cd07840          67 VTSKGKGSIY-MVFEYMDH-DLTGLLDSP   93 (287)
T ss_pred             EecCCCCcEE-EEeccccc-cHHHHHhcc
Confidence            9877  6777 99999985 888888654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=98.63  E-value=4.5e-08  Score=86.55  Aligned_cols=88  Identities=17%  Similarity=0.204  Sum_probs=71.1

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch--hH-HHHHHHHhhhCCCCccceecc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG--IF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      ++|...+.||+|+||.||+             +... ++..+|+|.++......  .. +.+|+.++.+++|+||+++. 
T Consensus         5 ~~y~~~~~lg~g~~~~v~~-------------~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~-   70 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYR-------------ARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVK-   70 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEE-------------EEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEE-
Confidence            4577779999999999999             7765 47899999986433221  22 78899999999999999999 


Q ss_pred             ceEeeC--CeEEEEEEecCCCCCccccccC
Q 043820          232 SVVIRP--GYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       232 g~~~~~--~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +++...  ...+ +||||++ ++|.+++..
T Consensus        71 ~~~~~~~~~~~~-lv~e~~~-~~L~~~~~~   98 (293)
T cd07843          71 EVVVGSNLDKIY-MVMEYVE-HDLKSLMET   98 (293)
T ss_pred             EEEEecCCCcEE-EEehhcC-cCHHHHHHh
Confidence            988776  6677 9999998 488887754

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=98.63  E-value=8.6e-08  Score=85.43  Aligned_cols=85  Identities=16%  Similarity=0.187  Sum_probs=67.9

Q ss_pred             ccccceecccCccceeccccccccccccceeecC---CCcEEEEEEccCCC---CchhH-HHHHHHHhhhCCCCccceec
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI---DARVVAARIVFAGS---VTGIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~---~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      |.....||+|+||.||+             +...   .+..||+|.+....   ..... +.+|+.++..++|+||++++
T Consensus         2 y~~~~~ig~g~~g~v~~-------------~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~   68 (316)
T cd07842           2 YEIEGCIGRGTYGRVYK-------------AKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLV   68 (316)
T ss_pred             ceEEEEeccCCcEEEEE-------------EEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceE
Confidence            55668899999999999             7653   47899999987632   22234 88999999999999999999


Q ss_pred             cceEeeC--CeEEEEEEecCCCCCcccccc
Q 043820          231 PSVVIRP--GYKVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       231 ~g~~~~~--~~~~~lv~Ey~~~GsL~~~l~  258 (282)
                       +.+...  ...+ +||||+++ +|.+++.
T Consensus        69 -~~~~~~~~~~~~-lv~e~~~~-~l~~~~~   95 (316)
T cd07842          69 -EVFLEHADKSVY-LLFDYAEH-DLWQIIK   95 (316)
T ss_pred             -EEEeCCCCceEE-EEEeCCCc-CHHHHHH
Confidence             999877  6666 99999985 5666553

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.63  E-value=2.2e-08  Score=95.90  Aligned_cols=83  Identities=16%  Similarity=0.226  Sum_probs=74.1

Q ss_pred             ceecccCccceeccccccccccccceeecCC-CcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccceEeeCCe
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARID-ARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSVVIRPGY  239 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~-~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~~~~~~~  239 (282)
                      -+||+|.+|+||.             |...+ ...+|||.++........ +..|+.+-+.++|.|||+.+ |++.+++.
T Consensus       581 vVLGKGTYG~VYA-------------~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYL-Gs~senGf  646 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYA-------------ARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYL-GSVSENGF  646 (1226)
T ss_pred             EEeecCceeEEEe-------------eccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHh-hccCCCCe
Confidence            4799999999999             76544 467899999877666667 99999999999999999999 99999998


Q ss_pred             EEEEEEecCCCCCccccccC
Q 043820          240 KVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       240 ~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      .. +.||-+|||||.+.|.+
T Consensus       647 ~k-IFMEqVPGGSLSsLLrs  665 (1226)
T KOG4279|consen  647 FK-IFMEQVPGGSLSSLLRS  665 (1226)
T ss_pred             EE-EEeecCCCCcHHHHHHh
Confidence            88 99999999999999975

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=98.63  E-value=8.3e-08  Score=84.65  Aligned_cols=88  Identities=19%  Similarity=0.206  Sum_probs=64.9

Q ss_pred             CccccceecccCccceeccccccccccccceeec-C-CCcEEEEEEccCCCCc--hhH-HHHHHHHhhhC---CCCccce
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-I-DARVVAARIVFAGSVT--GIF-FARSVTEVAKI---YARSRPR  228 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~-~~~~vAvK~l~~~~~~--~~~-f~~e~~~l~~l---~H~nlv~  228 (282)
                      +|...+.||+|+||.||+             +.. . .+..||+|.+......  ... +.+|+.++..+   +||||++
T Consensus         2 ~Y~~~~~lg~G~~g~Vy~-------------~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~   68 (290)
T cd07862           2 QYECVAEIGEGAYGKVFK-------------ARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR   68 (290)
T ss_pred             CcceeeEeccCCCeEEEE-------------EEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcce
Confidence            466778999999999999             764 2 3678999988643222  122 67777776655   6999999


Q ss_pred             eccceEee-----CCeEEEEEEecCCCCCccccccCC
Q 043820          229 SYPSVVIR-----PGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       229 l~~g~~~~-----~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ++ +++..     ....+ +||||++ |+|.+++...
T Consensus        69 ~~-~~~~~~~~~~~~~~~-lv~e~~~-~~l~~~~~~~  102 (290)
T cd07862          69 LF-DVCTVSRTDRETKLT-LVFEHVD-QDLTTYLDKV  102 (290)
T ss_pred             EE-EEEecccCCCCCcEE-EEEccCC-CCHHHHHHhC
Confidence            99 98853     23455 9999997 6898888643

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.63  E-value=8.2e-09  Score=97.15  Aligned_cols=78  Identities=19%  Similarity=0.234  Sum_probs=66.2

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH----HHHHHHHhhhCCCCccceeccc
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF----FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~----f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      |+..+.||.|+||.||-             +... +...||||.+.-...+..+    .+.|+..|.++.|||.+... |
T Consensus        28 f~dLrEIGHGSFGAVYf-------------Ard~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYk-g   93 (948)
T KOG0577|consen   28 FSDLREIGHGSFGAVYF-------------ARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYK-G   93 (948)
T ss_pred             HHHHHHhcCCccceeEE-------------eeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCccccc-c
Confidence            66668999999999999             6543 5688999999866555543    89999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCC
Q 043820          233 VVIRPGYKVGLILELKPD  250 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~  250 (282)
                      |+......+ ||||||-|
T Consensus        94 CyLre~TaW-LVMEYClG  110 (948)
T KOG0577|consen   94 CYLREHTAW-LVMEYCLG  110 (948)
T ss_pred             eeeccchHH-HHHHHHhc
Confidence            998887788 99999975

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=98.63  E-value=9.4e-08  Score=86.93  Aligned_cols=94  Identities=14%  Similarity=0.090  Sum_probs=72.1

Q ss_pred             HHHhccCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCC--chhH-HHHHHHHhhhCCCCcc
Q 043820          151 IANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSV--TGIF-FARSVTEVAKIYARSR  226 (282)
Q Consensus       151 l~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~--~~~~-f~~e~~~l~~l~H~nl  226 (282)
                      +....++|+..+.||+|+||.||+             +.. .++..||+|.+.....  .... +.+|+.+|..++|+||
T Consensus        10 ~~~~~~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i   76 (343)
T cd07880          10 IWEVPDRYRDLKQVGSGAYGTVCS-------------ALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENV   76 (343)
T ss_pred             hhccccceEEEEEeeecCCeEEEE-------------EEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCc
Confidence            334566788889999999999999             764 3688999999854322  1233 8899999999999999


Q ss_pred             ceeccceEeeCCe-----EEEEEEecCCCCCccccccC
Q 043820          227 PRSYPSVVIRPGY-----KVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       227 v~l~~g~~~~~~~-----~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +++. +++.....     .+++||||+ +++|.+++.+
T Consensus        77 v~~~-~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~  112 (343)
T cd07880          77 IGLL-DVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMKH  112 (343)
T ss_pred             ccee-eeecCCccccccceEEEEEecC-CCCHHHHHhc
Confidence            9999 88765432     223999999 6788888753

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=98.62  E-value=1.2e-07  Score=79.73  Aligned_cols=88  Identities=23%  Similarity=0.303  Sum_probs=74.7

Q ss_pred             ccccceecccCccceeccccccccccccceeecCC-CcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCccceeccceE
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARID-ARVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPRSYPSVV  234 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~-~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~l~~g~~  234 (282)
                      |...+.||+|++|.||+             +...+ +..+|+|.+...... ..+ +.+|+..+..++|+|+++++ +.+
T Consensus         1 ~~~~~~i~~g~~~~v~~-------------~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~-~~~   66 (225)
T smart00221        1 YELGKKLGEGAFGKVYL-------------ARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLY-GVF   66 (225)
T ss_pred             CceeeEeecCCCeEEEE-------------EEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhhe-eee
Confidence            34558899999999999             77664 789999999765444 445 99999999999999999999 998


Q ss_pred             eeCCeEEEEEEecCCCCCccccccCC
Q 043820          235 IRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       235 ~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ......+ +++||+++++|.+++...
T Consensus        67 ~~~~~~~-~v~e~~~~~~L~~~~~~~   91 (225)
T smart00221       67 EDPEPLY-LVMEYCEGGDLFDYLRKK   91 (225)
T ss_pred             ecCCceE-EEEeccCCCCHHHHHHhc
Confidence            8887788 999999999999998653

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=98.61  E-value=2.5e-08  Score=86.52  Aligned_cols=99  Identities=12%  Similarity=0.106  Sum_probs=71.1

Q ss_pred             ccccceecccCccceeccccccccccccceeecCC-CcEEEEEEccCC---C--CchhH-HHHHHHHhhhCCCCccceec
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARID-ARVVAARIVFAG---S--VTGIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~-~~~vAvK~l~~~---~--~~~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      |...+.||+|+||.||+             +.... +..+++|.+...   .  ..... +..|+.++..++|||++++.
T Consensus         2 y~i~~~ig~g~~g~v~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~   68 (260)
T cd08222           2 YILQQRLGKGSFGTVYL-------------VKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFH   68 (260)
T ss_pred             ceeeeeecCCCCceEEE-------------EEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHH
Confidence            45668999999999999             55432 334445544321   1  12223 77899999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCCC-CCcCCCCCcc
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHSS-RVRSLQYPDP  271 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~W~~R  271 (282)
                       +.+......+ ++|||+++++|..++.... ....++|...
T Consensus        69 -~~~~~~~~~~-lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~  108 (260)
T cd08222          69 -ASFLERDAFC-IITEYCEGRDLDCKLEELKHTGKTLSENQV  108 (260)
T ss_pred             -HHHhcCCceE-EEEEeCCCCCHHHHHHHHhhcccccCHHHH
Confidence             9988888877 9999999999998886422 1234666543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=98.60  E-value=9.3e-08  Score=85.32  Aligned_cols=100  Identities=18%  Similarity=0.210  Sum_probs=74.6

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch--hH-HHHHHHHhhhCCCCcccee
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG--IF-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      ..++|...+.||+|+||.||+             +... .+..||+|.+.......  .. +.+|+.++.+++|+|++++
T Consensus         5 ~~~~y~~~~~ig~g~~~~v~~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~   71 (309)
T cd07845           5 SVTEFEKLNRIGEGTYGIVYR-------------ARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVEL   71 (309)
T ss_pred             cccceeEeeeeeecCCEEEEE-------------EEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcce
Confidence            346788889999999999999             7754 58899999986433222  22 7789999999999999999


Q ss_pred             ccceEeeC--CeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          230 YPSVVIRP--GYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       230 ~~g~~~~~--~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      . +++...  +..+ +||||+++ +|.+++....  ..++|...
T Consensus        72 ~-~~~~~~~~~~~~-lv~e~~~~-~l~~~l~~~~--~~l~~~~~  110 (309)
T cd07845          72 K-EVVVGKHLDSIF-LVMEYCEQ-DLASLLDNMP--TPFSESQV  110 (309)
T ss_pred             E-EEEecCCCCeEE-EEEecCCC-CHHHHHHhcc--cCCCHHHH
Confidence            9 887654  3455 99999974 7877775432  23555443

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=98.59  E-value=1.4e-07  Score=86.22  Aligned_cols=87  Identities=14%  Similarity=0.021  Sum_probs=67.7

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC--chhH-HHHHHHHhhhCCCCccceec
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV--TGIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~--~~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      .++|...+.||+|+||.||+             +... .+..||+|.+.....  .... +.+|+.++..++|+||++++
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~   86 (359)
T cd07876          20 LKRYQQLKPIGSGAQGIVCA-------------AFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLL   86 (359)
T ss_pred             hhceEEEEEeecCCCEEEEE-------------EEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeee
Confidence            46788889999999999999             7644 578999999864322  2233 88999999999999999999


Q ss_pred             cceEeeCC------eEEEEEEecCCCCCccccc
Q 043820          231 PSVVIRPG------YKVGLILELKPDPDPNPDR  257 (282)
Q Consensus       231 ~g~~~~~~------~~~~lv~Ey~~~GsL~~~l  257 (282)
                       +++....      ..+ +||||+++ +|.+.+
T Consensus        87 -~~~~~~~~~~~~~~~~-lv~e~~~~-~l~~~~  116 (359)
T cd07876          87 -NVFTPQKSLEEFQDVY-LVMELMDA-NLCQVI  116 (359)
T ss_pred             -eeeccCCCccccceeE-EEEeCCCc-CHHHHH
Confidence             8876443      345 99999986 455544

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>smart00473 PAN_AP divergent subfamily of APPLE domains

Probab=98.59  E-value=1.7e-07  Score=66.18  Aligned_cols=53  Identities=45%  Similarity=0.902  Sum_probs=43.1

Q ss_pred             cCCCHHHHHHHhhc-CCCceeEeeccccCCCceeEEec-cccccceecCCCCceEEEE
Q 043820           13 KSINLNECREKCLE-NSSCMVYTNLDIRGGGSGCAMWF-GELIDMRDFPDGGQDLYIR   68 (282)
Q Consensus        13 ~~~~~~~C~~~Cl~-nCsC~a~~~~~~~~~~~~C~~~~-~~l~~~~~~~~~~~~~~~~   68 (282)
                      ...++++|++.|++ +|+|.||.|.+   ++++|.+|. +.+.+....+..+.++|.+
T Consensus        23 ~~~s~~~C~~~C~~~~~~C~s~~y~~---~~~~C~l~~~~~~~~~~~~~~~~~~~y~~   77 (78)
T smart00473       23 SVASLEECASKCLNSNCSCRSFTYNN---GTKGCLLWSESSLGDARLFPSGGVDLYEK   77 (78)
T ss_pred             cCCCHHHHHHHhCCCCCceEEEEEcC---CCCEEEEeeCCccccceecccCCceeEEe
Confidence            56799999999999 99999999974   568999999 7777776555556666654

Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions.

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=98.58  E-value=7e-08  Score=87.14  Aligned_cols=82  Identities=11%  Similarity=0.076  Sum_probs=63.8

Q ss_pred             ecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc---hhH-HHHHHHHhhhC---CCCccceeccceEe
Q 043820          164 LGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT---GIF-FARSVTEVAKI---YARSRPRSYPSVVI  235 (282)
Q Consensus       164 lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~---~~~-f~~e~~~l~~l---~H~nlv~l~~g~~~  235 (282)
                      ||+|+||.||+             +... .+..||+|.+......   ... +..|..++...   .||||+++. +.+.
T Consensus         1 lG~G~~g~Vy~-------------~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~-~~~~   66 (330)
T cd05586           1 IGKGTFGQVYQ-------------VRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLK-FSFQ   66 (330)
T ss_pred             CCCCCceEEEE-------------EEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceE-EEEe
Confidence            69999999999             7654 5889999998643211   112 55666666554   699999999 8888


Q ss_pred             eCCeEEEEEEecCCCCCccccccCC
Q 043820          236 RPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       236 ~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      .....+ +||||+++|+|.+++...
T Consensus        67 ~~~~~~-lv~e~~~~g~L~~~l~~~   90 (330)
T cd05586          67 TDSDLY-LVTDYMSGGELFWHLQKE   90 (330)
T ss_pred             cCCeEE-EEEcCCCCChHHHHHHhc
Confidence            888888 999999999999888643

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>PTZ00036 glycogen synthase kinase; Provisional

Probab=98.58  E-value=1e-07  Score=89.92  Aligned_cols=85  Identities=16%  Similarity=0.212  Sum_probs=65.4

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceecc
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      ...+|...+.||+|+||.||+             +... .+..||+|.+...    .. ..+|+.+|..++|+|||++. 
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~-------------~~~~~~~~~vAiK~i~~~----~~~~~~Ei~il~~l~h~niv~l~-  125 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYE-------------AICIDTSEKVAIKKVLQD----PQYKNRELLIMKNLNHINIIFLK-  125 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEE-------------EEECCCCCEEEEEEEecC----cchHHHHHHHHHhcCCCCCccee-
Confidence            445788889999999999999             7654 5789999988532    22 66899999999999999998 


Q ss_pred             ceEeeC--------CeEEEEEEecCCCCCcccccc
Q 043820          232 SVVIRP--------GYKVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       232 g~~~~~--------~~~~~lv~Ey~~~GsL~~~l~  258 (282)
                      ++....        ...+ +||||+++ +|.+++.
T Consensus       126 ~~~~~~~~~~~~~~~~l~-lvmE~~~~-~l~~~~~  158 (440)
T PTZ00036        126 DYYYTECFKKNEKNIFLN-VVMEFIPQ-TVHKYMK  158 (440)
T ss_pred             eeEeecccccCCCceEEE-EEEecCCc-cHHHHHH
Confidence            765321        1234 89999995 6666654

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=98.58  E-value=1.3e-07  Score=85.65  Aligned_cols=88  Identities=14%  Similarity=0.080  Sum_probs=69.6

Q ss_pred             ccCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCccceecc
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      +++|...+.||+|+||.||+             +.. .++..||+|.+...... ... +.+|+.++.+++|+||++++ 
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~-   69 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCS-------------ATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGIL-   69 (336)
T ss_pred             ccceEEEEEEEecCCeEEEE-------------EEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchh-
Confidence            46788889999999999999             764 35889999998643222 233 88999999999999999999 


Q ss_pred             ceEeeCC-----eEEEEEEecCCCCCcccccc
Q 043820          232 SVVIRPG-----YKVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       232 g~~~~~~-----~~~~lv~Ey~~~GsL~~~l~  258 (282)
                      +.+....     ..+ +++||+++ +|.+++.
T Consensus        70 ~~~~~~~~~~~~~~~-lv~e~~~~-~l~~~~~   99 (336)
T cd07849          70 DIIRPPSFESFNDVY-IVQELMET-DLYKLIK   99 (336)
T ss_pred             heeecccccccceEE-EEehhccc-CHHHHHh
Confidence            8876543     356 99999985 7776664

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=98.58  E-value=1e-07  Score=84.58  Aligned_cols=88  Identities=16%  Similarity=0.175  Sum_probs=68.9

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc--hhH-HHHHHHHhhhCCCCccceecc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT--GIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~--~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      ++|....+||+|+||.||+             +... ++..||+|.+......  ... +.+|+.++.+++|+||++++ 
T Consensus        12 ~~y~~~~~lg~g~~~~v~~-------------~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~-   77 (310)
T cd07865          12 SKYEKLAKIGQGTFGEVFK-------------ARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI-   77 (310)
T ss_pred             hheEEEEEeecCCCEEEEE-------------EEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceE-
Confidence            4577889999999999999             7654 5889999988643222  223 77899999999999999999 


Q ss_pred             ceEeeCCe--------EEEEEEecCCCCCccccccC
Q 043820          232 SVVIRPGY--------KVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       232 g~~~~~~~--------~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +++...+.        .+ +||||+++ +|.+++..
T Consensus        78 ~~~~~~~~~~~~~~~~~~-lv~e~~~~-~l~~~l~~  111 (310)
T cd07865          78 EICRTKATPYNRYKGSFY-LVFEFCEH-DLAGLLSN  111 (310)
T ss_pred             EEEecccccccCCCceEE-EEEcCCCc-CHHHHHHh
Confidence            98876543        26 99999975 78777654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=98.57  E-value=7e-08  Score=87.34  Aligned_cols=97  Identities=20%  Similarity=0.218  Sum_probs=74.1

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC--CchhH-HHHHHHHhhhC-CCCcccee
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS--VTGIF-FARSVTEVAKI-YARSRPRS  229 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~--~~~~~-f~~e~~~l~~l-~H~nlv~l  229 (282)
                      .++|...+.||+|+||.||+             |... .+..+|+|.+....  ..... +.+|+.++.++ +|+||+++
T Consensus         6 ~~~y~~~~~lg~g~~~~v~~-------------~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~   72 (337)
T cd07852           6 LRKYEILQKLGKGAYGIVWK-------------AIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKL   72 (337)
T ss_pred             hhHHHHhHhhcCCCCeeEEE-------------EEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccce
Confidence            35677779999999999999             7754 57889999885422  22233 78899999999 99999999


Q ss_pred             ccceEeeCC--eEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          230 YPSVVIRPG--YKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       230 ~~g~~~~~~--~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      + |++...+  ..+ +||||++ ++|.+++...    .++|..+
T Consensus        73 ~-~~~~~~~~~~~~-lv~e~~~-~~L~~~~~~~----~~~~~~~  109 (337)
T cd07852          73 L-NVIKAENDKDIY-LVFEYME-TDLHAVIRAN----ILEDVHK  109 (337)
T ss_pred             e-eeeccCCCceEE-EEecccc-cCHHHHHhcC----CCCHHHH
Confidence            9 9876533  456 9999998 5898887542    4566544

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=98.57  E-value=1.5e-07  Score=85.62  Aligned_cols=98  Identities=14%  Similarity=0.030  Sum_probs=75.8

Q ss_pred             cCHHHHHHhccCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCC--chhH-HHHHHHHhhhC
Q 043820          146 FELATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSV--TGIF-FARSVTEVAKI  221 (282)
Q Consensus       146 ~~~~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~--~~~~-f~~e~~~l~~l  221 (282)
                      ....++...+++|...+.||+|+||.||+             +.. .++..||+|.+.....  ...+ +.+|+.++.++
T Consensus         7 ~~~~~~~~~~~~y~~~~~lg~G~~g~v~~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l   73 (345)
T cd07877           7 ELNKTIWEVPERYQNLSPVGSGAYGSVCA-------------AFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM   73 (345)
T ss_pred             hHHHHHhhccCceEEEEEeeecCCeEEEE-------------EEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHc
Confidence            44567778889999999999999999999             764 4688999999865322  2234 88999999999


Q ss_pred             CCCccceeccceEeeCC------eEEEEEEecCCCCCccccccC
Q 043820          222 YARSRPRSYPSVVIRPG------YKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       222 ~H~nlv~l~~g~~~~~~------~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +|+||+++. +++....      ..+ +++|++ +++|.+++..
T Consensus        74 ~h~~iv~~~-~~~~~~~~~~~~~~~~-lv~~~~-~~~L~~~~~~  114 (345)
T cd07877          74 KHENVIGLL-DVFTPARSLEEFNDVY-LVTHLM-GADLNNIVKC  114 (345)
T ss_pred             CCCccccee-eeeeecccccccccEE-EEehhc-ccCHHHHHhc
Confidence            999999999 8875432      244 777776 7888877643

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=98.55  E-value=1e-07  Score=81.80  Aligned_cols=82  Identities=15%  Similarity=0.141  Sum_probs=69.1

Q ss_pred             ecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc---hhH-HHHHHHHhhhCCCCccceeccceEeeCC
Q 043820          164 LGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT---GIF-FARSVTEVAKIYARSRPRSYPSVVIRPG  238 (282)
Q Consensus       164 lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~---~~~-f~~e~~~l~~l~H~nlv~l~~g~~~~~~  238 (282)
                      ||+|+||.||+             +... ++..+|+|.+......   ... +..|+.++..++|+||++++ +.+..++
T Consensus         1 lg~G~~~~v~~-------------~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~-~~~~~~~   66 (250)
T cd05123           1 LGKGSFGKVLL-------------VRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLH-YAFQTEE   66 (250)
T ss_pred             CCCCCceEEEE-------------EEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHH-HHeecCC
Confidence            68999999999             7654 4789999998754322   233 99999999999999999999 9988888


Q ss_pred             eEEEEEEecCCCCCccccccCC
Q 043820          239 YKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       239 ~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ..+ ++|||+++++|.+++...
T Consensus        67 ~~~-~v~e~~~~~~L~~~l~~~   87 (250)
T cd05123          67 KLY-LVLEYAPGGELFSHLSKE   87 (250)
T ss_pred             eeE-EEEecCCCCcHHHHHHhc
Confidence            888 999999999999998654

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=98.55  E-value=1.5e-07  Score=85.03  Aligned_cols=83  Identities=19%  Similarity=0.245  Sum_probs=67.7

Q ss_pred             cceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch--------------hH-HHHHHHHhhhCCCC
Q 043820          161 NNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG--------------IF-FARSVTEVAKIYAR  224 (282)
Q Consensus       161 ~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~--------------~~-f~~e~~~l~~l~H~  224 (282)
                      .+.||+|+||.||+             +... .+..||+|.+.......              .. +.+|+.++..++|+
T Consensus        14 ~~~ig~G~~g~vy~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~   80 (335)
T PTZ00024         14 GAHLGEGTYGKVEK-------------AYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHE   80 (335)
T ss_pred             hhcccCCCceeEEE-------------EEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCc
Confidence            47799999999999             7644 58899999886432211              12 67899999999999


Q ss_pred             ccceeccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          225 SRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       225 nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ||++++ +++...+..+ ++|||++ |+|.+++..
T Consensus        81 ~iv~~~-~~~~~~~~~~-lv~e~~~-~~l~~~l~~  112 (335)
T PTZ00024         81 NIMGLV-DVYVEGDFIN-LVMDIMA-SDLKKVVDR  112 (335)
T ss_pred             ceeeee-EEEecCCcEE-EEEeccc-cCHHHHHHh
Confidence            999999 9998888888 9999997 689888754

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=98.54  E-value=1.8e-07  Score=82.40  Aligned_cols=90  Identities=17%  Similarity=0.145  Sum_probs=66.0

Q ss_pred             eecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC---chhH-HHHHHHH---hhhCCCCccceeccceE
Q 043820          163 KLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV---TGIF-FARSVTE---VAKIYARSRPRSYPSVV  234 (282)
Q Consensus       163 ~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~---~~~~-f~~e~~~---l~~l~H~nlv~l~~g~~  234 (282)
                      .||+|+||.||+             +... ++..+|+|.+.....   .... +.+|..+   +...+|+|++++. +.+
T Consensus         1 ~lg~G~~g~Vy~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~   66 (279)
T cd05633           1 IIGRGGFGEVYG-------------CRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMT-YAF   66 (279)
T ss_pred             CcccCCCeEEEE-------------EEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEE-EEE
Confidence            479999999999             7654 578999998865322   1223 4555433   3345799999999 888


Q ss_pred             eeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCc
Q 043820          235 IRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPD  270 (282)
Q Consensus       235 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~  270 (282)
                      ...+..+ +||||+++|+|.+++....   .++|..
T Consensus        67 ~~~~~~~-lv~e~~~~~~L~~~i~~~~---~l~~~~   98 (279)
T cd05633          67 HTPDKLC-FILDLMNGGDLHYHLSQHG---VFSEKE   98 (279)
T ss_pred             ecCCeEE-EEEecCCCCCHHHHHHhcC---CCCHHH
Confidence            8888888 9999999999999886433   355543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=98.53  E-value=1.2e-07  Score=85.64  Aligned_cols=89  Identities=11%  Similarity=0.065  Sum_probs=70.4

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC--chhH-HHHHHHHhhhCCCCccceecc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV--TGIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~--~~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      ++|+..+.||+|+||.||+             +... .+..||+|.+.....  .... +.+|+.++..++|+||+++. 
T Consensus         5 ~~y~~~~~lg~g~~g~v~~-------------~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~-   70 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCS-------------AIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIR-   70 (334)
T ss_pred             hceeeeeeeecCCCeEEEE-------------EEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHH-
Confidence            5788889999999999999             7654 588999999875322  2234 88899999999999999999 


Q ss_pred             ceEee----CCeEEEEEEecCCCCCccccccCC
Q 043820          232 SVVIR----PGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       232 g~~~~----~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +++..    ....+ +|+||+. |+|.+++...
T Consensus        71 ~~~~~~~~~~~~~~-lv~e~~~-~~l~~~~~~~  101 (334)
T cd07855          71 DILRPPGADFKDVY-VVMDLME-SDLHHIIHSD  101 (334)
T ss_pred             HhccccCCCCceEE-EEEehhh-hhHHHHhccC
Confidence            87653    33456 9999996 6898888643

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=98.53  E-value=1.6e-07  Score=85.20  Aligned_cols=89  Identities=13%  Similarity=0.071  Sum_probs=68.8

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC--chhH-HHHHHHHhhhCCCCcccee
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV--TGIF-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~--~~~~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      ..+.|...+.||+|+||.||+             +... .+..||+|.+.....  ...+ +.+|+.++..++|+||+++
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   79 (343)
T cd07878          13 VPERYQNLTPVGSGAYGSVCS-------------AYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGL   79 (343)
T ss_pred             hhhhhhhheecccCCCeEEEE-------------EEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhh
Confidence            346688889999999999999             7643 578999999865322  2223 7899999999999999999


Q ss_pred             ccceEeeC------CeEEEEEEecCCCCCcccccc
Q 043820          230 YPSVVIRP------GYKVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       230 ~~g~~~~~------~~~~~lv~Ey~~~GsL~~~l~  258 (282)
                      + +++...      ...+ +++|++ +++|.+++.
T Consensus        80 ~-~~~~~~~~~~~~~~~~-~~~~~~-~~~l~~~~~  111 (343)
T cd07878          80 L-DVFTPATSIENFNEVY-LVTNLM-GADLNNIVK  111 (343)
T ss_pred             h-hhhcccccccccCcEE-EEeecC-CCCHHHHHh
Confidence            9 876533      2345 999987 778887764

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=98.53  E-value=1.9e-07  Score=84.79  Aligned_cols=86  Identities=13%  Similarity=0.070  Sum_probs=67.1

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC--CchhH-HHHHHHHhhhCCCCccceecc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS--VTGIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~--~~~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      ++|...+.||+|+||.||+             +... ++..||+|.+....  ..... +.+|+.++..++|+||+++. 
T Consensus        15 ~~y~~~~~ig~g~~g~v~~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~-   80 (342)
T cd07879          15 ERYTSLKQVGSGAYGSVCS-------------AIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLL-   80 (342)
T ss_pred             cceEEEEEeeecCCeEEEE-------------EEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchh-
Confidence            6788889999999999999             7643 58899999986432  11223 88999999999999999999 


Q ss_pred             ceEeeCC------eEEEEEEecCCCCCccccc
Q 043820          232 SVVIRPG------YKVGLILELKPDPDPNPDR  257 (282)
Q Consensus       232 g~~~~~~------~~~~lv~Ey~~~GsL~~~l  257 (282)
                      +++....      ..+ +++||+.. +|..++
T Consensus        81 ~~~~~~~~~~~~~~~~-lv~e~~~~-~l~~~~  110 (342)
T cd07879          81 DVFTSAVSGDEFQDFY-LVMPYMQT-DLQKIM  110 (342)
T ss_pred             heecccccCCCCceEE-EEeccccc-CHHHHH
Confidence            9876543      345 99999974 666544

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=98.52  E-value=2.3e-07  Score=80.35  Aligned_cols=84  Identities=13%  Similarity=0.145  Sum_probs=65.0

Q ss_pred             ceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc---hhH-HHHHHHH-hhhCCCCccceeccceEe
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT---GIF-FARSVTE-VAKIYARSRPRSYPSVVI  235 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~---~~~-f~~e~~~-l~~l~H~nlv~l~~g~~~  235 (282)
                      +.||+|+||.||+             +... ++..||+|.+......   ... +..|..+ ....+|+|++++. +.+.
T Consensus         2 ~~l~~g~~~~v~~-------------a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~-~~~~   67 (260)
T cd05611           2 KPISKGAFGSVYL-------------AKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLY-YSFQ   67 (260)
T ss_pred             ccCCcCCCeeEEE-------------EEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeee-eeEE
Confidence            5689999999999             7654 5789999998653221   122 4555544 4455899999999 9998


Q ss_pred             eCCeEEEEEEecCCCCCccccccCC
Q 043820          236 RPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       236 ~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      .++..+ +|+||+++|+|.+++...
T Consensus        68 ~~~~~~-lv~e~~~~~~L~~~l~~~   91 (260)
T cd05611          68 SKDYLY-LVMEYLNGGDCASLIKTL   91 (260)
T ss_pred             cCCeEE-EEEeccCCCCHHHHHHHc
Confidence            888888 999999999999998643

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=98.52  E-value=1.6e-07  Score=83.93  Aligned_cols=86  Identities=19%  Similarity=0.185  Sum_probs=69.2

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC---chhH-HHHHHHHhhhCCCCccceeccc
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV---TGIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~---~~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      |+..+.||+|+||.||+             +... ++..+|+|.+.....   .... +.+|+.++..++|+|++++. +
T Consensus        17 ~~~~~~lg~g~~g~v~~-------------~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~-~   82 (308)
T cd06634          17 FSDLREIGHGSFGAVYF-------------ARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR-G   82 (308)
T ss_pred             HHHHHheeeCCCEEEEE-------------EEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEE-E
Confidence            55558899999999999             7654 578899998864221   1223 88999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ++......+ +||||+. |+|.+++..
T Consensus        83 ~~~~~~~~~-lv~e~~~-~~l~~~~~~  107 (308)
T cd06634          83 CYLREHTAW-LVMEYCL-GSASDLLEV  107 (308)
T ss_pred             EEEcCCeeE-EEEEccC-CCHHHHHHH
Confidence            998888888 9999997 688777653

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=98.52  E-value=1.1e-08  Score=102.32  Aligned_cols=107  Identities=14%  Similarity=0.095  Sum_probs=82.8

Q ss_pred             HHHHHHhccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhCC
Q 043820          148 LATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKIY  222 (282)
Q Consensus       148 ~~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~  222 (282)
                      ..++.-..++|.+...||+|+||.|..             ..+. .+..+|.|++++..   ..... |..|-.+|..-+
T Consensus        67 v~~lrl~~~DfeilKvIGrGaFGEV~l-------------Vr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~n  133 (1317)
T KOG0612|consen   67 VKELRLKAEDFEILKVIGRGAFGEVAL-------------VRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGN  133 (1317)
T ss_pred             HHHHhCCHHhhHHHHHhcccccceeEE-------------EEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCC
Confidence            345566677899999999999999999             6654 47889999998632   22333 999999999999


Q ss_pred             CCccceeccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCc
Q 043820          223 ARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPD  270 (282)
Q Consensus       223 H~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~  270 (282)
                      .+.||+|+ =.+.+..+.| +|||||+||||-..+..-. ..+-+|.+
T Consensus       134 s~Wiv~Lh-yAFQD~~~LY-lVMdY~pGGDlltLlSk~~-~~pE~~Ar  178 (1317)
T KOG0612|consen  134 SEWIVQLH-YAFQDERYLY-LVMDYMPGGDLLTLLSKFD-RLPEDWAR  178 (1317)
T ss_pred             cHHHHHHH-HHhcCccceE-EEEecccCchHHHHHhhcC-CChHHHHH
Confidence            99999998 4555566666 9999999999999886543 34456753

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=98.52  E-value=2.7e-07  Score=82.40  Aligned_cols=80  Identities=18%  Similarity=0.186  Sum_probs=61.9

Q ss_pred             ceecccCccceeccccccccccccceeecC---CCcEEEEEEccCCCCchhHHHHHHHHhhhCCCCccceeccceEee--
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARI---DARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRPRSYPSVVIR--  236 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~---~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~nlv~l~~g~~~~--  236 (282)
                      .+||+|+||.||+             +...   .+..||+|.+.... ....+.+|+.++..++|+||+++. +++..  
T Consensus         7 ~~lG~G~~g~Vy~-------------~~~~~~~~~~~~a~k~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~-~~~~~~~   71 (317)
T cd07867           7 CKVGRGTYGHVYK-------------AKRKDGKDEKEYALKQIEGTG-ISMSACREIALLRELKHPNVIALQ-KVFLSHS   71 (317)
T ss_pred             eEeccCCCeeEEE-------------EEecCCCccceEEEEEecCCC-CcHHHHHHHHHHHhCCCCCeeeEE-EEEeccC
Confidence            6899999999999             7643   35789999886432 112288999999999999999999 88754  


Q ss_pred             CCeEEEEEEecCCCCCcccccc
Q 043820          237 PGYKVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       237 ~~~~~~lv~Ey~~~GsL~~~l~  258 (282)
                      ....+ +++||+++ +|.+++.
T Consensus        72 ~~~~~-lv~e~~~~-~l~~~~~   91 (317)
T cd07867          72 DRKVW-LLFDYAEH-DLWHIIK   91 (317)
T ss_pred             CCeEE-EEEeeeCC-cHHHHHH
Confidence            34445 99999885 6766664

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=98.52  E-value=1.5e-07  Score=82.75  Aligned_cols=92  Identities=16%  Similarity=0.127  Sum_probs=67.4

Q ss_pred             eecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC---chhH-HHHHHH---HhhhCCCCccceeccceE
Q 043820          163 KLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV---TGIF-FARSVT---EVAKIYARSRPRSYPSVV  234 (282)
Q Consensus       163 ~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~---~~~~-f~~e~~---~l~~l~H~nlv~l~~g~~  234 (282)
                      .||+|+||.||+             +... .+..||+|.+.....   .... +..|..   .+....|+|++++. +.+
T Consensus         1 ~ig~g~~g~Vy~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~   66 (278)
T cd05606           1 IIGRGGFGEVYG-------------CRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMS-YAF   66 (278)
T ss_pred             CcccCCCeEEEE-------------EEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeee-eee
Confidence            479999999999             6643 578999998865322   2222 445543   44556899999999 888


Q ss_pred             eeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          235 IRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       235 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      ...+..+ +||||+++|+|.+++....   .++|..+.
T Consensus        67 ~~~~~~~-~v~e~~~g~~L~~~l~~~~---~l~~~~~~  100 (278)
T cd05606          67 HTPDKLS-FILDLMNGGDLHYHLSQHG---VFSEAEMR  100 (278)
T ss_pred             ecCCEEE-EEEecCCCCcHHHHHHhcC---CCCHHHHH
Confidence            8888777 9999999999998885432   46665543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=98.51  E-value=1.9e-07  Score=81.68  Aligned_cols=100  Identities=19%  Similarity=0.119  Sum_probs=69.6

Q ss_pred             HHHHhccCcccccee--cccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhHHHHHHHHhhh-CCCCc
Q 043820          150 TIANATDNFSINNKL--GEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIFFARSVTEVAK-IYARS  225 (282)
Q Consensus       150 el~~at~~f~~~~~l--G~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~f~~e~~~l~~-l~H~n  225 (282)
                      ++..-.++|...+.+  |+|+||.||+             +... .+..+|+|.+........    |+..... .+|+|
T Consensus         8 ~~~~~~~~~~~~~~~~lg~g~~g~v~~-------------~~~~~~~~~~~~k~~~~~~~~~~----e~~~~~~~~~h~~   70 (267)
T PHA03390          8 ELVQFLKNCEIVKKLKLIDGKFGKVSV-------------LKHKPTQKLFVQKIIKAKNFNAI----EPMVHQLMKDNPN   70 (267)
T ss_pred             HHHHHHHhhccccceeecCCCceEEEE-------------EEEcCCCcEEEEEEEehhhcchh----hHHHHHHhhcCCC
Confidence            344444555555555  9999999999             6643 578899998864322211    2211111 27999


Q ss_pred             cceeccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          226 RPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       226 lv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      +++++ +.+...+..+ +||||+++|+|.+++....   .++|...
T Consensus        71 iv~~~-~~~~~~~~~~-iv~e~~~~~~L~~~l~~~~---~l~~~~~  111 (267)
T PHA03390         71 FIKLY-YSVTTLKGHV-LIMDYIKDGDLFDLLKKEG---KLSEAEV  111 (267)
T ss_pred             EEEEE-EEEecCCeeE-EEEEcCCCCcHHHHHHhcC---CCCHHHH
Confidence            99999 9998888888 9999999999999986543   4566543

>PHA03207 serine/threonine kinase US3; Provisional

Probab=98.51  E-value=1.6e-07  Score=87.08  Aligned_cols=92  Identities=15%  Similarity=0.096  Sum_probs=72.4

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC---CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceecc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI---DARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~---~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      ..|.....||+|+||.||+             +...   .+..||+|.+...     + +.+|+.++..++|+|||+++ 
T Consensus        92 ~~y~i~~~Lg~G~~g~Vy~-------------~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~-  152 (392)
T PHA03207         92 MQYNILSSLTPGSEGEVFV-------------CTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLI-  152 (392)
T ss_pred             CceEEEEeecCCCCeEEEE-------------EEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCcccee-
Confidence            4688889999999999999             5432   3578999987532     3 77899999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      +.+......+ ++||++. ++|.+++...   ..++|..+
T Consensus       153 ~~~~~~~~~~-lv~e~~~-~~l~~~l~~~---~~l~~~~~  187 (392)
T PHA03207        153 HAYRWKSTVC-MVMPKYK-CDLFTYVDRS---GPLPLEQA  187 (392)
T ss_pred             eeEeeCCEEE-EEehhcC-CCHHHHHHhc---CCCCHHHH
Confidence            9888888877 9999986 6888888322   24555544

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=98.51  E-value=1.8e-07  Score=83.53  Aligned_cols=83  Identities=7%  Similarity=-0.074  Sum_probs=65.4

Q ss_pred             ceecccCccceeccccccccccccceeecCCCcEEEEEEccCCC--CchhH-HHHHHHHhhhCCCCccceeccceEeeCC
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGS--VTGIF-FARSVTEVAKIYARSRPRSYPSVVIRPG  238 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~--~~~~~-f~~e~~~l~~l~H~nlv~l~~g~~~~~~  238 (282)
                      +.+|.|+++.+|+             +.. ++..||+|.+....  ....+ +.+|+.++..++|+||++++ +++...+
T Consensus         8 ~~~~~~~~v~~~~-------------~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~-~~~~~~~   72 (314)
T cd08216           8 KCFEDLMIVHLAK-------------HKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYV-TSFIVDS   72 (314)
T ss_pred             HhhcCCceEEEEE-------------ecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhh-heeecCC
Confidence            4445555655665             444 68899999986542  22334 99999999999999999999 9988888


Q ss_pred             eEEEEEEecCCCCCccccccCC
Q 043820          239 YKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       239 ~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ..+ ++|||+++|+|.+++...
T Consensus        73 ~~~-~~~e~~~~~~l~~~l~~~   93 (314)
T cd08216          73 ELY-VVSPLMAYGSCEDLLKTH   93 (314)
T ss_pred             eEE-EEEeccCCCCHHHHHHHh
Confidence            888 999999999999998753

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=98.51  E-value=3.4e-07  Score=83.86  Aligned_cols=87  Identities=14%  Similarity=0.030  Sum_probs=67.6

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC--chhH-HHHHHHHhhhCCCCccceec
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV--TGIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~--~~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      .++|...+.||+|+||.||+             +... .+..||+|.+.....  .... +.+|+.++..++|+||++++
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~   89 (364)
T cd07875          23 LKRYQNLKPIGSGAQGIVCA-------------AYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL   89 (364)
T ss_pred             hcceeEEEEeecCCCeEEEE-------------EEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccc
Confidence            46788889999999999999             6643 478899999865322  2233 88999999999999999999


Q ss_pred             cceEeeCC------eEEEEEEecCCCCCccccc
Q 043820          231 PSVVIRPG------YKVGLILELKPDPDPNPDR  257 (282)
Q Consensus       231 ~g~~~~~~------~~~~lv~Ey~~~GsL~~~l  257 (282)
                       +.+....      ..+ +||||+++ +|.+++
T Consensus        90 -~~~~~~~~~~~~~~~~-lv~e~~~~-~l~~~~  119 (364)
T cd07875          90 -NVFTPQKSLEEFQDVY-IVMELMDA-NLCQVI  119 (364)
T ss_pred             -eeecccccccccCeEE-EEEeCCCC-CHHHHH
Confidence             8765432      346 99999975 566655

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=98.50  E-value=1.2e-07  Score=85.46  Aligned_cols=95  Identities=14%  Similarity=0.154  Sum_probs=74.6

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC--CchhH-HHHHHHHhhhCCCCccceeccce
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS--VTGIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~--~~~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      |...+.||+|+||.||+             +... .+..+|+|.+....  ....+ +.+|+..+..++|+||+++. +.
T Consensus         2 y~i~~~ig~g~~~~v~~-------------~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~-~~   67 (330)
T cd07834           2 YELLKPIGSGAYGVVCS-------------AVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLL-DI   67 (330)
T ss_pred             ceeeeeecCCCCeEEEE-------------EEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhh-hh
Confidence            55668999999999999             7755 48899999987543  22334 99999999999999999999 99


Q ss_pred             EeeCC-----eEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          234 VIRPG-----YKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       234 ~~~~~-----~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      +....     ..+ ++|||++ ++|.+++....   .++|...
T Consensus        68 ~~~~~~~~~~~~~-lv~e~~~-~~l~~~l~~~~---~l~~~~~  105 (330)
T cd07834          68 LRPPSPEDFNDVY-IVTELME-TDLHKVIKSPQ---PLTDDHI  105 (330)
T ss_pred             hcccCcccccceE-EEecchh-hhHHHHHhCCC---CCCHHHH
Confidence            87765     566 9999999 48888886432   4555543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=98.50  E-value=2e-07  Score=84.64  Aligned_cols=87  Identities=15%  Similarity=0.146  Sum_probs=70.2

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      ..|...+.||+|+||.||+             +... .+..||+|.+........+ +.+|+.++..++|+||++++ +.
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~-------------~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~-~~   70 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFS-------------AVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVY-EV   70 (342)
T ss_pred             cceEEEEEecCCCCEEEEE-------------EEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhH-hh
Confidence            4677789999999999999             7654 5789999998765555555 99999999999999999999 87


Q ss_pred             EeeCC--------------eEEEEEEecCCCCCcccccc
Q 043820          234 VIRPG--------------YKVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       234 ~~~~~--------------~~~~lv~Ey~~~GsL~~~l~  258 (282)
                      .....              ..+ +++||++ ++|.+++.
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~-lv~e~~~-~~L~~~~~  107 (342)
T cd07854          71 LGPSGSDLTEDVGSLTELNSVY-IVQEYME-TDLANVLE  107 (342)
T ss_pred             hcccccccccccccccccceEE-EEeeccc-ccHHHHHH
Confidence            65432              345 9999998 58877764

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=98.49  E-value=2.6e-07  Score=84.29  Aligned_cols=88  Identities=14%  Similarity=0.029  Sum_probs=67.8

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc--hhH-HHHHHHHhhhCCCCcccee
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT--GIF-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~--~~~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      ..++|...+.||+|+||.||+             +... .+..||+|.+......  ... +.+|+.++..++|+||+++
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~   81 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCA-------------AYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL   81 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEE-------------EEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhce
Confidence            346788889999999999999             6543 4789999998653222  223 8899999999999999999


Q ss_pred             ccceEeeCC------eEEEEEEecCCCCCccccc
Q 043820          230 YPSVVIRPG------YKVGLILELKPDPDPNPDR  257 (282)
Q Consensus       230 ~~g~~~~~~------~~~~lv~Ey~~~GsL~~~l  257 (282)
                      + +++....      ..+ ++|||+++ +|.+++
T Consensus        82 ~-~~~~~~~~~~~~~~~~-lv~e~~~~-~l~~~~  112 (355)
T cd07874          82 L-NVFTPQKSLEEFQDVY-LVMELMDA-NLCQVI  112 (355)
T ss_pred             e-eeeeccccccccceeE-EEhhhhcc-cHHHHH
Confidence            9 8875432      346 99999975 565554

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=98.49  E-value=3.1e-07  Score=82.22  Aligned_cols=80  Identities=19%  Similarity=0.174  Sum_probs=62.2

Q ss_pred             cceecccCccceeccccccccccccceeecC---CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccceEee
Q 043820          161 NNKLGEGGFGPVYKVVAAGICFAGTITGARI---DARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSVVIR  236 (282)
Q Consensus       161 ~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~---~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~~~~  236 (282)
                      ..+||+|+||.||+             +...   .+..+|+|.+....  ... +.+|+.++.+++|+||++++ +.+..
T Consensus         6 ~~~lG~G~~g~Vy~-------------~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~-~~~~~   69 (317)
T cd07868           6 GCKVGRGTYGHVYK-------------AKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQ-KVFLS   69 (317)
T ss_pred             ccccccCCCeEEEE-------------EEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCccee-eeEec
Confidence            36899999999999             7643   45789999986432  223 88999999999999999999 87754


Q ss_pred             --CCeEEEEEEecCCCCCcccccc
Q 043820          237 --PGYKVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       237 --~~~~~~lv~Ey~~~GsL~~~l~  258 (282)
                        ....+ +++||+++ +|.+++.
T Consensus        70 ~~~~~~~-lv~e~~~~-~l~~~~~   91 (317)
T cd07868          70 HADRKVW-LLFDYAEH-DLWHIIK   91 (317)
T ss_pred             CCCcEEE-EEEeccCC-CHHHHHH
Confidence              33445 99999875 7777664

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=98.49  E-value=1.3e-07  Score=84.00  Aligned_cols=88  Identities=20%  Similarity=0.249  Sum_probs=70.1

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc-hh-H-HHHHHHHhhhCCCCc-cceecc
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT-GI-F-FARSVTEVAKIYARS-RPRSYP  231 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~-~~-~-f~~e~~~l~~l~H~n-lv~l~~  231 (282)
                      .|...++||+|.||.||+             |... +|..||+|.+.-.... +. . -.+|+.++.+++|+| ||+|. 
T Consensus        12 ~~~~~eklGeGtyg~Vyk-------------ar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~-   77 (323)
T KOG0594|consen   12 DYEKVEKLGEGTYGVVYK-------------ARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLH-   77 (323)
T ss_pred             HHHHHHHhCCCCceEEEE-------------EEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEE-
Confidence            344457899999999999             7644 6889999999754432 22 2 789999999999999 99999 


Q ss_pred             ceEeeCC------eEEEEEEecCCCCCccccccCC
Q 043820          232 SVVIRPG------YKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       232 g~~~~~~------~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +++...+      ..+ ||+||+.. +|.+++..-
T Consensus        78 dv~~~~~~~~~~~~l~-lvfe~~d~-DL~~ymd~~  110 (323)
T KOG0594|consen   78 DVIHTSNNHRGIGKLY-LVFEFLDR-DLKKYMDSL  110 (323)
T ss_pred             eeeeecccccccceEE-EEEEeecc-cHHHHHHhc
Confidence            9988877      455 99999986 788887653

>PRK10345 hypothetical protein; Provisional

Probab=98.49  E-value=3.4e-07  Score=77.77  Aligned_cols=85  Identities=24%  Similarity=0.269  Sum_probs=64.4

Q ss_pred             cccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH-HHHHHHHhhhC-----CCCccceeccc
Q 043820          159 SINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF-FARSVTEVAKI-----YARSRPRSYPS  232 (282)
Q Consensus       159 ~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l-----~H~nlv~l~~g  232 (282)
                      +....||+|+||.||.             ... ++.. +||.+........+ +.+|+.++..+     .||||++++ |
T Consensus         5 ~~~~~LG~G~~~~Vy~-------------hp~-~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~y-g   68 (210)
T PRK10345          5 SEQSPLGTGRHRKCYA-------------HPE-DAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYY-G   68 (210)
T ss_pred             CCcceecCCCceEEEE-------------CCC-CcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceee-E
Confidence            4458999999999997             321 2333 68887654444455 99999999999     579999999 9


Q ss_pred             eEeeCC---eEEEEEEec--CCCCCccccccC
Q 043820          233 VVIRPG---YKVGLILEL--KPDPDPNPDRLH  259 (282)
Q Consensus       233 ~~~~~~---~~~~lv~Ey--~~~GsL~~~l~~  259 (282)
                      +..++.   ..+.+|+||  +++|+|.+++.+
T Consensus        69 ~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~  100 (210)
T PRK10345         69 TVETDCGTGYVYDVIADFDGKPSITLTEFAEQ  100 (210)
T ss_pred             EEEeCCCCeEEEEEEecCCCCcchhHHHHHHc
Confidence            988764   323378999  668999999954

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=98.48  E-value=3e-07  Score=81.57  Aligned_cols=98  Identities=14%  Similarity=0.065  Sum_probs=72.6

Q ss_pred             cCccccceecccCccceeccccccccccccceeecCC-CcEEEEEEccCCCCc-hhH-HHHHHHHhhhC-CCCccceecc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARID-ARVVAARIVFAGSVT-GIF-FARSVTEVAKI-YARSRPRSYP  231 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~-~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l-~H~nlv~l~~  231 (282)
                      ++|...+.||+|+||.||+             +...+ +..||+|.+...... ... +..|+..+... .|+||++++ 
T Consensus        15 ~~~~~~~~lg~g~~~~v~~-------------~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~-   80 (296)
T cd06618          15 NDLENLGEIGSGTCGQVYK-------------MRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCY-   80 (296)
T ss_pred             chheeeeEeeccCCeEEEE-------------EEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhh-
Confidence            4566679999999999999             77654 889999998754332 223 77788777777 499999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      |++......+ ++|||+++ +|..++....  ..++|..+
T Consensus        81 ~~~~~~~~~~-~v~e~~~~-~l~~l~~~~~--~~l~~~~~  116 (296)
T cd06618          81 GYFITDSDVF-ICMELMST-CLDKLLKRIQ--GPIPEDIL  116 (296)
T ss_pred             eeeecCCeEE-EEeeccCc-CHHHHHHHhc--CCCCHHHH
Confidence            9999988888 99999864 6665543322  14555544

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=98.48  E-value=2.9e-07  Score=81.11  Aligned_cols=82  Identities=16%  Similarity=0.159  Sum_probs=65.2

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch-hH-HHHHHHHhhhCC-CCccceeccce
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG-IF-FARSVTEVAKIY-ARSRPRSYPSV  233 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~-H~nlv~l~~g~  233 (282)
                      |.....||+|+||.||+             +... .+..+|+|.+....... .. +.+|+.++.++. |+||++++ |.
T Consensus         6 ~~~~~~lg~G~~g~vy~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~-~~   71 (288)
T cd06616           6 LKDLGEIGRGAFGTVNK-------------MLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFY-GA   71 (288)
T ss_pred             hHHHHHhCCCCceEEEE-------------EEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeee-eE
Confidence            44457899999999999             6654 57899999987543333 33 999999999996 99999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCccc
Q 043820          234 VIRPGYKVGLILELKPDPDPNP  255 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~  255 (282)
                      +...+..+ ++|||++. +|.+
T Consensus        72 ~~~~~~~~-~~~e~~~~-~l~~   91 (288)
T cd06616          72 LFREGDCW-ICMELMDI-SLDK   91 (288)
T ss_pred             EecCCcEE-EEEecccC-CHHH
Confidence            88888888 99999874 4433

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=98.47  E-value=3.2e-07  Score=80.73  Aligned_cols=86  Identities=19%  Similarity=0.203  Sum_probs=63.9

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch--hH-HHHHHHHhhhC---CCCccceec
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG--IF-FARSVTEVAKI---YARSRPRSY  230 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l---~H~nlv~l~  230 (282)
                      |...+.||+|+||.||+             +... ++..||+|.+.......  .. +.+|+.++..+   +|+||++++
T Consensus         2 y~~~~~lg~g~~g~v~~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~   68 (288)
T cd07863           2 YEPVAEIGVGAYGTVYK-------------ARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLM   68 (288)
T ss_pred             ceEeeEEeecCCeEEEE-------------EEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeee
Confidence            55668999999999999             7654 58899999886532221  22 66777766654   799999999


Q ss_pred             cceEeeC-----CeEEEEEEecCCCCCccccccC
Q 043820          231 PSVVIRP-----GYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       231 ~g~~~~~-----~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                       +++...     ...+ ++|||+++ +|.+++..
T Consensus        69 -~~~~~~~~~~~~~~~-lv~e~~~~-~l~~~~~~   99 (288)
T cd07863          69 -DVCATSRTDRETKVT-LVFEHVDQ-DLRTYLDK   99 (288)
T ss_pred             -eeeccccCCCCceEE-EEEccccc-CHHHHHHh
Confidence             887542     2345 99999984 88888764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=98.47  E-value=9.3e-08  Score=77.99  Aligned_cols=74  Identities=22%  Similarity=0.306  Sum_probs=59.9

Q ss_pred             cceecccCccceeccccccccccccceeecCC-CcEEEEEEccCCC-Cchh-H-HHHHHHHhhhCCCCccceeccceEee
Q 043820          161 NNKLGEGGFGPVYKVVAAGICFAGTITGARID-ARVVAARIVFAGS-VTGI-F-FARSVTEVAKIYARSRPRSYPSVVIR  236 (282)
Q Consensus       161 ~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~-~~~vAvK~l~~~~-~~~~-~-f~~e~~~l~~l~H~nlv~l~~g~~~~  236 (282)
                      -++||+|.+|+||+             +...+ +..||+|++.-.. ..+. . -++|+.++..+.|+|||+|+ .....
T Consensus         7 mekigegtygtvfk-------------arn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~-dvlhs   72 (292)
T KOG0662|consen    7 MEKIGEGTYGTVFK-------------ARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH-DVLHS   72 (292)
T ss_pred             HHhhcCCcceeeEe-------------cccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehh-hhhcc
Confidence            37899999999999             76554 6789999886432 1222 2 88999999999999999999 88877


Q ss_pred             CCeEEEEEEecCC
Q 043820          237 PGYKVGLILELKP  249 (282)
Q Consensus       237 ~~~~~~lv~Ey~~  249 (282)
                      ....- ||+||+.
T Consensus        73 dkklt-lvfe~cd   84 (292)
T KOG0662|consen   73 DKKLT-LVFEFCD   84 (292)
T ss_pred             CceeE-EeHHHhh
Confidence            77777 9999986

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=98.46  E-value=3.5e-07  Score=82.91  Aligned_cols=88  Identities=13%  Similarity=0.103  Sum_probs=69.2

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC--CchhH-HHHHHHHhhhCCCCccceecc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS--VTGIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~--~~~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      +.|.....||+|+||.||+             +... ++..||+|.+....  ..... +.+|+.++..++|+||+++. 
T Consensus         5 ~~y~~~~~lg~G~~~~vy~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~-   70 (337)
T cd07858           5 TKYVPIKPIGRGAYGIVCS-------------AKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIK-   70 (337)
T ss_pred             cceeEEEEeccCCCeEEEE-------------EEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchH-
Confidence            4577778999999999999             6643 58899999986532  22233 88899999999999999999 


Q ss_pred             ceEeeCC-----eEEEEEEecCCCCCccccccC
Q 043820          232 SVVIRPG-----YKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       232 g~~~~~~-----~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +++....     ..+ +++||+. ++|.+++..
T Consensus        71 ~~~~~~~~~~~~~~~-lv~e~~~-~~L~~~~~~  101 (337)
T cd07858          71 DIMPPPHREAFNDVY-IVYELMD-TDLHQIIRS  101 (337)
T ss_pred             HheecccccccCcEE-EEEeCCC-CCHHHHHhc
Confidence            9876543     356 9999997 688887754

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=98.46  E-value=1.9e-07  Score=81.66  Aligned_cols=86  Identities=19%  Similarity=0.151  Sum_probs=71.2

Q ss_pred             cccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc--hhH-HHHHHHHhhhCCCCccceeccceE
Q 043820          159 SINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT--GIF-FARSVTEVAKIYARSRPRSYPSVV  234 (282)
Q Consensus       159 ~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~--~~~-f~~e~~~l~~l~H~nlv~l~~g~~  234 (282)
                      +....||+|+||.||+             +... ++..+|+|.+......  ..+ +..|+.++..++|+|+++++ +++
T Consensus         2 ~~~~~ig~g~~~~vy~-------------~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~-~~~   67 (282)
T cd07829           2 EKLEKLGEGTYGVVYK-------------ARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLL-DVI   67 (282)
T ss_pred             eeehcccccCcceEEE-------------eeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHH-hhh
Confidence            3457899999999999             7765 4889999998754322  223 88999999999999999999 999


Q ss_pred             eeCCeEEEEEEecCCCCCccccccCC
Q 043820          235 IRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       235 ~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ...+..+ +|+||++ ++|.+++...
T Consensus        68 ~~~~~~~-~v~e~~~-~~l~~~i~~~   91 (282)
T cd07829          68 HTERKLY-LVFEYCD-MDLKKYLDKR   91 (282)
T ss_pred             hcCCceE-EEecCcC-cCHHHHHHhh
Confidence            8888888 9999998 5899988654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>PTZ00284 protein kinase; Provisional

Probab=98.45  E-value=3e-07  Score=87.29  Aligned_cols=97  Identities=16%  Similarity=0.052  Sum_probs=68.8

Q ss_pred             HHHHHHhccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhHHHHHHHHhhhCCC---
Q 043820          148 LATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIFFARSVTEVAKIYA---  223 (282)
Q Consensus       148 ~~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H---  223 (282)
                      .+++...+++|...++||+|+||.||+             +... .+..||||+++........+..|+.++..++|   
T Consensus       121 ~~~~~~~~~~y~i~~~lG~G~fg~V~~-------------a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~  187 (467)
T PTZ00284        121 GEDIDVSTQRFKILSLLGEGTFGKVVE-------------AWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADP  187 (467)
T ss_pred             CCccccCCCcEEEEEEEEeccCEEEEE-------------EEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCc
Confidence            345556678899999999999999999             7654 47889999986432211115566666666554   


Q ss_pred             ---CccceeccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          224 ---RSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       224 ---~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                         .+++++. +++......+++|||++ +++|.+++..
T Consensus       188 ~~~~~i~~i~-~~~~~~~~~~~iv~~~~-g~~l~~~l~~  224 (467)
T PTZ00284        188 ADRFPLMKIQ-RYFQNETGHMCIVMPKY-GPCLLDWIMK  224 (467)
T ss_pred             ccCcceeeeE-EEEEcCCceEEEEEecc-CCCHHHHHHH
Confidence               4588888 77766544444999987 6788888764

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=98.44  E-value=4e-07  Score=89.22  Aligned_cols=109  Identities=17%  Similarity=0.209  Sum_probs=83.6

Q ss_pred             ccCHHHHHHhccCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCchhHHHHHHHHhhhC-C
Q 043820          145 LFELATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVTGIFFARSVTEVAKI-Y  222 (282)
Q Consensus       145 ~~~~~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l-~  222 (282)
                      ...++.+...++-|.+.+.+|.|.+|.||+             +.- .+++.+|+|++......+++...|..++... +
T Consensus         8 ~~~~~~lpdp~d~~ei~evig~Gtygkv~k-------------~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~   74 (953)
T KOG0587|consen    8 DIDLSSLPDPADIFEIIEVIGNGTYGKVYK-------------GRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSH   74 (953)
T ss_pred             ccchhhCCCCCCccEEEEEEeeccceeEEE-------------EeeeecCceeeeEeecCCccccHHHHHHHHHHHhccC
Confidence            345566667788888899999999999999             654 3588899999876555555577788887776 8


Q ss_pred             CCccceeccceEee-----CCeEEEEEEecCCCCCccccccCCCCCcCCCCC
Q 043820          223 ARSRPRSYPSVVIR-----PGYKVGLILELKPDPDPNPDRLHSSRVRSLQYP  269 (282)
Q Consensus       223 H~nlv~l~~g~~~~-----~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~  269 (282)
                      |||++.++ |+...     ++..+ ||||||.+||.-+.+..-. ...|+|.
T Consensus        75 hpnv~~fy-g~~~k~~~~~~DqLW-LVMEfC~gGSVTDLVKn~~-g~rl~E~  123 (953)
T KOG0587|consen   75 HPNVATFY-GAFIKKDPGNGDQLW-LVMEFCGGGSVTDLVKNTK-GNRLKEE  123 (953)
T ss_pred             CCCcceEE-EEEEEecCCCCCeEE-EEeeccCCccHHHHHhhhc-ccchhhH
Confidence            99999999 98754     34555 9999999999999886543 3344443

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=98.44  E-value=2.8e-07  Score=80.76  Aligned_cols=97  Identities=20%  Similarity=0.227  Sum_probs=70.9

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch--hH-HHHHHHHhhhC---CCCccceec
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG--IF-FARSVTEVAKI---YARSRPRSY  230 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l---~H~nlv~l~  230 (282)
                      |+..+.||+|+||.||+             +... ++..+|+|.+.......  .. +.+|+.++.++   .|+|++++.
T Consensus         1 y~~~~~l~~g~~~~v~~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~   67 (287)
T cd07838           1 YEELAEIGEGAYGTVYK-------------ARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLL   67 (287)
T ss_pred             CeEEEEecccCceEEEE-------------EEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEE
Confidence            34568999999999999             7765 48899999986432221  22 77787766555   699999999


Q ss_pred             cceEeeCCe-----EEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          231 PSVVIRPGY-----KVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       231 ~g~~~~~~~-----~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                       +++...+.     .+ ++|||+++ +|.+++..... ..++|...
T Consensus        68 -~~~~~~~~~~~~~~~-l~~e~~~~-~l~~~l~~~~~-~~l~~~~~  109 (287)
T cd07838          68 -DVCHGPRTDRELKLT-LVFEHVDQ-DLATYLSKCPK-PGLPPETI  109 (287)
T ss_pred             -EEEeeccCCCCceeE-EEehhccc-CHHHHHHHccC-CCCCHHHH
Confidence             99887766     66 99999984 88888754332 23566544

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=98.44  E-value=3.5e-07  Score=81.21  Aligned_cols=89  Identities=21%  Similarity=0.265  Sum_probs=69.2

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch--hH-HHHHHHHhhhCCCCccceec
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG--IF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      .++|+..+.||+|+||.||+             +... ++..+|+|.+.......  .. +.+|+.++..++|+||++++
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~-------------~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~   73 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYK-------------ARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLI   73 (311)
T ss_pred             cccEEEEEEeccCCCEEEEE-------------EEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchh
Confidence            46788889999999999999             7654 57899999886433222  23 88999999999999999999


Q ss_pred             cceEeeCCe--------EEEEEEecCCCCCccccccC
Q 043820          231 PSVVIRPGY--------KVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       231 ~g~~~~~~~--------~~~lv~Ey~~~GsL~~~l~~  259 (282)
                       +.+.....        .+ +++||+.. +|...+..
T Consensus        74 -~~~~~~~~~~~~~~~~~~-lv~~~~~~-~l~~~~~~  107 (311)
T cd07866          74 -DMAVERPDKSKRKRGSVY-MVTPYMDH-DLSGLLEN  107 (311)
T ss_pred             -hheecccccccccCceEE-EEEecCCc-CHHHHHhc
Confidence             87755433        35 99999985 66666654

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=98.42  E-value=4.9e-07  Score=79.08  Aligned_cols=95  Identities=19%  Similarity=0.143  Sum_probs=74.8

Q ss_pred             cccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc--hhH-HHHHHHHhhhCCCCccceeccceE
Q 043820          159 SINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT--GIF-FARSVTEVAKIYARSRPRSYPSVV  234 (282)
Q Consensus       159 ~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~--~~~-f~~e~~~l~~l~H~nlv~l~~g~~  234 (282)
                      ...+.||+|++|.||+             +... ++..+++|.+......  ... +..|+..+..++|+||+++. +.+
T Consensus         2 ~~~~~i~~g~~~~v~~-------------~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~-~~~   67 (283)
T cd05118           2 QKLGKIGEGTYGVVYK-------------ARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLL-DVF   67 (283)
T ss_pred             ccceeeecCCCceEEE-------------EEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHH-Hhh
Confidence            3457899999999999             7765 5789999998754332  234 88999999999999999999 999


Q ss_pred             eeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          235 IRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       235 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      ..+...+ +++||+++ +|.+++....  ..+++..+
T Consensus        68 ~~~~~~~-~v~e~~~~-~l~~~l~~~~--~~~~~~~~  100 (283)
T cd05118          68 RHKGDLY-LVFEFMDT-DLYKLIKDRQ--RGLPESLI  100 (283)
T ss_pred             ccCCCEE-EEEeccCC-CHHHHHHhhc--ccCCHHHH
Confidence            8888888 99999985 8888876533  23555443

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=98.42  E-value=6.7e-07  Score=81.56  Aligned_cols=88  Identities=15%  Similarity=0.055  Sum_probs=68.3

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC--CchhH-HHHHHHHhhhCCCCccceec
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS--VTGIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~--~~~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      .+.|+..+.||+|+||.||+             +... ++..||+|.+....  ..... +.+|+.++..++|+||++++
T Consensus        15 ~~~y~~~~~lg~g~~g~V~~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~   81 (353)
T cd07850          15 LKRYQNLKPIGSGAQGIVCA-------------AYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLL   81 (353)
T ss_pred             hcceEEEEEeccCCCEEEEE-------------EEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCccee
Confidence            45688889999999999999             7644 68899999986432  22233 88899999999999999999


Q ss_pred             cceEeeCC------eEEEEEEecCCCCCcccccc
Q 043820          231 PSVVIRPG------YKVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       231 ~g~~~~~~------~~~~lv~Ey~~~GsL~~~l~  258 (282)
                       +++....      ..+ +||||+.+ +|.+.+.
T Consensus        82 -~~~~~~~~~~~~~~~~-lv~e~~~~-~l~~~~~  112 (353)
T cd07850          82 -NVFTPQKSLEEFQDVY-LVMELMDA-NLCQVIQ  112 (353)
T ss_pred             -eeeccCCCccccCcEE-EEEeccCC-CHHHHHh
Confidence             8875432      346 99999974 7777653

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=98.40  E-value=7.9e-08  Score=96.88  Aligned_cols=79  Identities=25%  Similarity=0.328  Sum_probs=61.1

Q ss_pred             HhccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchh--HHHHHHHHhhhCCCCcccee
Q 043820          153 NATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGI--FFARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       153 ~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~--~f~~e~~~l~~l~H~nlv~l  229 (282)
                      +-..+|.....||+||||.||+             .... ||+.+|||+|+-......  +..+|+.++++|+|||+|+.
T Consensus       476 RY~~DFEEL~lLGkGGFG~Vvk-------------VRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRY  542 (1351)
T KOG1035|consen  476 RYLNDFEELELLGKGGFGSVVK-------------VRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRY  542 (1351)
T ss_pred             hHhhhhHHHHHhcCCCCceEEE-------------EeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeee
Confidence            3446688889999999999999             6544 899999999976542221  28899999999999999999


Q ss_pred             ccceEeeCCeEEEEEEe
Q 043820          230 YPSVVIRPGYKVGLILE  246 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~E  246 (282)
                      + ..+.+..... -++|
T Consensus       543 y-sAWVEs~~~~-~~~e  557 (1351)
T KOG1035|consen  543 Y-SAWVESTAEL-TVLE  557 (1351)
T ss_pred             e-hhhhccCCcc-cccc
Confidence            9 7777655544 4443

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.40  E-value=3.2e-08  Score=93.88  Aligned_cols=89  Identities=19%  Similarity=0.242  Sum_probs=72.0

Q ss_pred             cCccccceecccCccceeccccccccccccceeecCC-CcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARID-ARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~-~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      +.+.+.-.||.|+||.||+             +...+ +...|.|.+...+....+ |+-|+.+|....||+||+|+ +.
T Consensus        32 d~WeIiGELGDGAFGKVyK-------------A~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl-~a   97 (1187)
T KOG0579|consen   32 DHWEIIGELGDGAFGKVYK-------------AVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLL-SA   97 (1187)
T ss_pred             HHHHHHhhhcCccchhhhh-------------hhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHH-HH
Confidence            3345557899999999999             66554 445678888766555556 99999999999999999999 88


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccC
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +...+..+ ++.|||.||-.+..+..
T Consensus        98 yy~enkLw-iliEFC~GGAVDaimlE  122 (1187)
T KOG0579|consen   98 YYFENKLW-ILIEFCGGGAVDAIMLE  122 (1187)
T ss_pred             HhccCceE-EEEeecCCchHhHHHHH
Confidence            87777788 99999999998877653

>PHA03210 serine/threonine kinase US3; Provisional

Probab=98.37  E-value=2.6e-07  Score=88.59  Aligned_cols=102  Identities=11%  Similarity=0.131  Sum_probs=63.6

Q ss_pred             ccCccccceecccCccceecccccccccccc-ceee--cCCCcE----EEEEEccCCCCchhH-HHHHHHHhhhCCCCcc
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGT-ITGA--RIDARV----VAARIVFAGSVTGIF-FARSVTEVAKIYARSR  226 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~-~~g~--~~~~~~----vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nl  226 (282)
                      .++|...+.||+|+||.||++.......... ..+.  ...+..    +++|.+.. ...... +.+|+.+|..++|+||
T Consensus       147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~-~~~~~~~~~~Ei~il~~l~HpnI  225 (501)
T PHA03210        147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKA-GSRAAIQLENEILALGRLNHENI  225 (501)
T ss_pred             hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhc-chHHHHHHHHHHHHHHhCCCCCc
Confidence            4678888999999999999832110000000 0000  000111    11122211 111223 8899999999999999


Q ss_pred             ceeccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          227 PRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       227 v~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      |+++ +++...+..+ +++|++. ++|.+++...
T Consensus       226 v~l~-~~~~~~~~~~-lv~e~~~-~~l~~~l~~~  256 (501)
T PHA03210        226 LKIE-EILRSEANTY-MITQKYD-FDLYSFMYDE  256 (501)
T ss_pred             CcEe-EEEEECCeeE-EEEeccc-cCHHHHHhhc
Confidence            9999 9999888888 9999985 5777777543

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.37  E-value=1.4e-08  Score=102.67  Aligned_cols=111  Identities=14%  Similarity=0.127  Sum_probs=84.2

Q ss_pred             cCccccceecccCccceeccccccccccccceee-cCCCcEEEEEEccCCCCc--hhH-HHHHHHHhhhCCCCccceecc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGA-RIDARVVAARIVFAGSVT--GIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~-~~~~~~vAvK~l~~~~~~--~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      -+++..++||.|.||.||.             +. +..|...|+|.+.-....  ... ..+|+.++..+.|||+|+.+ 
T Consensus      1235 ~rWqrg~~Ig~G~fG~VYt-------------avN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~Yy- 1300 (1509)
T KOG4645|consen 1235 FRWQRGNFIGGGTFGKVYT-------------AVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYY- 1300 (1509)
T ss_pred             eeeccccccCCcceeeeEE-------------eecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccC-
Confidence            3455668999999999999             55 445888899987643222  223 88999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccCCCC--CcCCCC--CccccceeccCCC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLHSSR--VRSLQY--PDPAQGFAIPSVN  281 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~--~~~l~W--~~R~~~~~~~~~~  281 (282)
                      |+-...+..+ |.|||+++|+|.+.+...+.  .....|  .+++.|+|+-|..
T Consensus      1301 GVEvHRekv~-IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~ 1353 (1509)
T KOG4645|consen 1301 GVEVHREKVY-IFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEH 1353 (1509)
T ss_pred             ceeecHHHHH-HHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhc
Confidence            9998888888 99999999999999865431  111233  3666777776543

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=98.36  E-value=5.7e-07  Score=81.76  Aligned_cols=90  Identities=16%  Similarity=0.103  Sum_probs=70.9

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC--CchhH-HHHHHHHhhhCCCCcccee
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS--VTGIF-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~--~~~~~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      ..++|.....||+|+||.||+             +... ++..||+|.+....  ....+ +.+|+.+++.++|+|++++
T Consensus        13 ~~~~y~~~~~ig~g~~g~vy~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   79 (343)
T cd07851          13 VPDRYQNLSPVGSGAYGQVCS-------------AFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGL   79 (343)
T ss_pred             ccCceEEEEEeccCCceEEEE-------------EEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHH
Confidence            356788889999999999999             7764 57899999986432  12223 7889999999999999999


Q ss_pred             ccceEeeCCe------EEEEEEecCCCCCccccccC
Q 043820          230 YPSVVIRPGY------KVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       230 ~~g~~~~~~~------~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      . +.....+.      .+ +|+||+ +++|.+++..
T Consensus        80 ~-~~~~~~~~~~~~~~~~-lv~e~~-~~~L~~~~~~  112 (343)
T cd07851          80 L-DVFTPASSLEDFQDVY-LVTHLM-GADLNNIVKC  112 (343)
T ss_pred             H-HHhhccccccccccEE-EEEecC-CCCHHHHHhc
Confidence            9 87665544      56 999998 5689888754

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=98.34  E-value=1.7e-06  Score=71.15  Aligned_cols=82  Identities=22%  Similarity=0.271  Sum_probs=69.9

Q ss_pred             ecccCccceeccccccccccccceeecCC-CcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCccceeccceEeeCCeE
Q 043820          164 LGEGGFGPVYKVVAAGICFAGTITGARID-ARVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPRSYPSVVIRPGYK  240 (282)
Q Consensus       164 lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~-~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~l~~g~~~~~~~~  240 (282)
                      ||+|++|.||+             +.... +..+++|........ ... +.+|+..+..++|+++++++ +........
T Consensus         1 l~~g~~~~v~~-------------~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~-~~~~~~~~~   66 (215)
T cd00180           1 LGEGGFGTVYL-------------ARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLY-GVFEDENHL   66 (215)
T ss_pred             CCcCCceEEEE-------------EEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEe-eeeecCCeE
Confidence            68999999999             77654 889999998765433 234 99999999999999999999 998888788


Q ss_pred             EEEEEecCCCCCccccccCC
Q 043820          241 VGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       241 ~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      + +++||+++++|.+++...
T Consensus        67 ~-~~~e~~~~~~l~~~~~~~   85 (215)
T cd00180          67 Y-LVMEYCEGGSLKDLLKEN   85 (215)
T ss_pred             E-EEEecCCCCcHHHHHHhc
Confidence            8 999999999999998653

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=98.30  E-value=1.5e-06  Score=73.48  Aligned_cols=79  Identities=18%  Similarity=0.181  Sum_probs=67.2

Q ss_pred             CccceeccccccccccccceeecC-CCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCccceeccceEeeCCeEEEEE
Q 043820          168 GFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRSYPSVVIRPGYKVGLI  244 (282)
Q Consensus       168 ~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l~~g~~~~~~~~~~lv  244 (282)
                      +||.||+             +... ++..+++|.+....... .+ +.+|+..+.+++|+|++++. |.+......+ ++
T Consensus         1 ~~g~v~~-------------~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~-~~~~~~~~~~-l~   65 (244)
T smart00220        1 SFGKVYL-------------ARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLY-DVFEDEDKLY-LV   65 (244)
T ss_pred             CceEEEE-------------EEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHH-hheeeCCEEE-EE
Confidence            5789999             7765 48899999997654443 45 99999999999999999999 9999888888 99


Q ss_pred             EecCCCCCccccccCCC
Q 043820          245 LELKPDPDPNPDRLHSS  261 (282)
Q Consensus       245 ~Ey~~~GsL~~~l~~~~  261 (282)
                      +||+++++|.+++....
T Consensus        66 ~e~~~~~~L~~~~~~~~   82 (244)
T smart00220       66 MEYCDGGDLFDLLKKRG   82 (244)
T ss_pred             EeCCCCCCHHHHHHhcc
Confidence            99999999999986543

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.29  E-value=3.2e-06  Score=81.80  Aligned_cols=88  Identities=14%  Similarity=0.078  Sum_probs=63.8

Q ss_pred             cCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCC-------chhH-HHHHHHHhhhCCCCccc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSV-------TGIF-FARSVTEVAKIYARSRP  227 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~-------~~~~-f~~e~~~l~~l~H~nlv  227 (282)
                      ..+...+.||+|+||.||+             |.......++.+.+.....       ...+ +.+|+.++..++|++++
T Consensus       333 ~~~~~~~~iG~G~~g~Vy~-------------~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~  399 (535)
T PRK09605        333 RRKIPDHLIGKGAEADIKK-------------GEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVP  399 (535)
T ss_pred             cccCccceeccCCcEEEEE-------------EeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCC
Confidence            3345568999999999999             7765433332222221111       1123 88999999999999999


Q ss_pred             eeccceEeeCCeEEEEEEecCCCCCcccccc
Q 043820          228 RSYPSVVIRPGYKVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       228 ~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~  258 (282)
                      ... .++......+ +||||+++++|.+++.
T Consensus       400 ~p~-~~~~~~~~~~-lv~E~~~g~~L~~~l~  428 (535)
T PRK09605        400 TPV-IYDVDPEEKT-IVMEYIGGKDLKDVLE  428 (535)
T ss_pred             eeE-EEEEeCCCCE-EEEEecCCCcHHHHHH
Confidence            887 7777777777 9999999999998773

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=98.29  E-value=4.1e-07  Score=82.19  Aligned_cols=94  Identities=13%  Similarity=0.067  Sum_probs=73.7

Q ss_pred             HHHHhccCccccceecccCccceeccccccccccccceeecC------CCcEEEEEEccCCCCch-hH-HHHHHHHhhhC
Q 043820          150 TIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI------DARVVAARIVFAGSVTG-IF-FARSVTEVAKI  221 (282)
Q Consensus       150 el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~------~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l  221 (282)
                      +|......+.....+-+|.||.||.             |.+.      +.+.|-+|+++....+- .. |+.|.-.+..+
T Consensus       278 ~l~v~r~Rv~l~~llqEGtFGri~~-------------gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~  344 (563)
T KOG1024|consen  278 ELTVQRCRVRLSCLLQEGTFGRIYR-------------GIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGA  344 (563)
T ss_pred             hhhhhhhheechhhhhcCchhheee-------------eeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcC
Confidence            4444445567777899999999999             7443      34567788887654443 33 99999999999


Q ss_pred             CCCccceeccceEeeCC-eEEEEEEecCCCCCcccccc
Q 043820          222 YARSRPRSYPSVVIRPG-YKVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       222 ~H~nlv~l~~g~~~~~~-~~~~lv~Ey~~~GsL~~~l~  258 (282)
                      .|||+..+. |++++.. .++ ++|.++.-|+|..||.
T Consensus       345 sH~nll~V~-~V~ie~~~~P~-V~y~~~~~gNLK~FL~  380 (563)
T KOG1024|consen  345 SHPNLLSVL-GVSIEDYATPF-VLYPATGVGNLKSFLQ  380 (563)
T ss_pred             cCCCcccee-EEEeeccCcce-EEEeccCcchHHHHHH
Confidence            999999999 9998754 456 9999999999999997

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=98.29  E-value=2.5e-07  Score=78.87  Aligned_cols=91  Identities=19%  Similarity=0.147  Sum_probs=73.8

Q ss_pred             ccCccccceecccCccceeccccccccccccceee-cCCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccc
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGA-RIDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~-~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      .+.|.+.+.||+|||..||.             +. +.++..+|+|++.-.+..+.+ -++|+..-++++|||+++++ .
T Consensus        20 ~~Ryri~~~LgeGGfsfv~L-------------V~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~-d   85 (302)
T KOG2345|consen   20 NKRYRIQRLLGEGGFSFVDL-------------VKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLV-D   85 (302)
T ss_pred             CceEEEeeeecCCCceeeee-------------ecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHH-H
Confidence            34577889999999999999             44 446789999999766655666 99999999999999999998 7


Q ss_pred             eEeeC----CeEEEEEEecCCCCCccccccC
Q 043820          233 VVIRP----GYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       233 ~~~~~----~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      .+..+    .+..||++.|...|+|.+.|..
T Consensus        86 h~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~  116 (302)
T KOG2345|consen   86 HQLREEKDGKHEAYLLLPYYKRGSLLDEIER  116 (302)
T ss_pred             HHHHhhccCceeEEEEeehhccccHHHHHHH
Confidence            66432    2333499999999999998864

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=98.24  E-value=4.7e-07  Score=83.01  Aligned_cols=89  Identities=19%  Similarity=0.127  Sum_probs=69.4

Q ss_pred             ccccceecccCccceeccccccccccccceee-cCCCcEEEEEEccCCCCch-------hH-HHHHHHHhhhCCCCccce
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGA-RIDARVVAARIVFAGSVTG-------IF-FARSVTEVAKIYARSRPR  228 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~-~~~~~~vAvK~l~~~~~~~-------~~-f~~e~~~l~~l~H~nlv~  228 (282)
                      |-..+.||+|+|+.||+             +. +.....||||+-.......       .+ -.+|-.+-..|.||-||+
T Consensus       465 YLlLhLLGrGGFSEVyK-------------AFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVK  531 (775)
T KOG1151|consen  465 YLLLHLLGRGGFSEVYK-------------AFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVK  531 (775)
T ss_pred             HHHHHHhccccHHHHHH-------------hcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeee
Confidence            44557899999999999             65 4456789999765322111       12 578889999999999999


Q ss_pred             eccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          229 SYPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       229 l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ++ .+..-+...++-|+||+++-+|+.||...
T Consensus       532 lY-DyfslDtdsFCTVLEYceGNDLDFYLKQh  562 (775)
T KOG1151|consen  532 LY-DYFSLDTDSFCTVLEYCEGNDLDFYLKQH  562 (775)
T ss_pred             ee-eeeeeccccceeeeeecCCCchhHHHHhh
Confidence            99 98876666666999999999999999753

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=98.22  E-value=3.2e-06  Score=76.34  Aligned_cols=86  Identities=16%  Similarity=0.102  Sum_probs=64.9

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-C--CcEEEEEEccCCCCc--hhH-HHHHHHHhhhC-CCCccceec
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-D--ARVVAARIVFAGSVT--GIF-FARSVTEVAKI-YARSRPRSY  230 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~--~~~vAvK~l~~~~~~--~~~-f~~e~~~l~~l-~H~nlv~l~  230 (282)
                      |...+.||+|+||.||+             +... .  +..+|+|.+......  ..+ +.+|+.++.++ +|+||++++
T Consensus         2 y~~~~~lg~G~~g~vy~-------------~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~   68 (332)
T cd07857           2 YELIKELGQGAYGIVCS-------------ARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLY   68 (332)
T ss_pred             ceEEEEccccCCeEEEE-------------EEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheee
Confidence            56668999999999999             6643 3  678999998643222  234 88999999999 599999999


Q ss_pred             cceEeeC----CeEEEEEEecCCCCCccccccC
Q 043820          231 PSVVIRP----GYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       231 ~g~~~~~----~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                       +.+...    ...+ +++||+. ++|.+++..
T Consensus        69 -~~~~~~~~~~~~~~-~~~e~~~-~~L~~~l~~   98 (332)
T cd07857          69 -DMDIVFPGNFNELY-LYEELME-ADLHQIIRS   98 (332)
T ss_pred             -eeeeeccccCCcEE-EEEeccc-CCHHHHHhc
Confidence             875433    2345 8888887 689888754

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=98.21  E-value=8.9e-07  Score=79.01  Aligned_cols=89  Identities=12%  Similarity=0.120  Sum_probs=68.5

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccC--CCCchhH-HHHHHHHhhhCCCCccceeccc
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFA--GSVTGIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~--~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      .|...+.||+|++|.|..             +... +|..||+|.+..  ......+ -.+|+++++.++|+||+.+. .
T Consensus        23 ~y~~~~~iG~GAyGvVcs-------------A~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~-d   88 (359)
T KOG0660|consen   23 YYVLIEPIGRGAYGVVCS-------------AKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLL-D   88 (359)
T ss_pred             eecccccccCcceeeEEE-------------EEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEE-e
Confidence            344458899999999999             6544 589999999973  2333344 88999999999999999998 7


Q ss_pred             eEee-----CCeEEEEEEecCCCCCccccccCCC
Q 043820          233 VVIR-----PGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       233 ~~~~-----~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      ....     -+..| +|+|+|+ -+|.+.|..+.
T Consensus        89 i~~p~~~~~f~DvY-iV~elMe-tDL~~iik~~~  120 (359)
T KOG0660|consen   89 IFRPPSRDKFNDVY-LVFELME-TDLHQIIKSQQ  120 (359)
T ss_pred             ecccccccccceeE-EehhHHh-hHHHHHHHcCc
Confidence            6654     23456 9999994 58888887654

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=98.21  E-value=2e-07  Score=81.97  Aligned_cols=88  Identities=22%  Similarity=0.237  Sum_probs=67.4

Q ss_pred             CccccceecccCccceeccccccccccccceeecC---C--CcEEEEEEccCCCC-chhH--HHHHHHHhhhCCCCccce
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI---D--ARVVAARIVFAGSV-TGIF--FARSVTEVAKIYARSRPR  228 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~---~--~~~vAvK~l~~~~~-~~~~--f~~e~~~l~~l~H~nlv~  228 (282)
                      .|.....||+|.+|.||+             +...   +  ...+|+|.++.... .+..  -.+|+.+++.++|+|++.
T Consensus        25 ~ye~ig~Ig~GTYG~Vyk-------------A~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~   91 (438)
T KOG0666|consen   25 EYEGIGKIGRGTYGKVYK-------------AVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVIS   91 (438)
T ss_pred             HhhccceecccccceeeE-------------eeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchh
Confidence            456668899999999999             5322   2  34789999975432 2222  789999999999999999


Q ss_pred             eccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          229 SYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       229 l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      |. .+....+...+|++||.+. +|...|+.
T Consensus        92 Lv-~Vfl~~d~~v~l~fdYAEh-DL~~II~f  120 (438)
T KOG0666|consen   92 LV-KVFLSHDKKVWLLFDYAEH-DLWHIIKF  120 (438)
T ss_pred             HH-HHHhccCceEEEEehhhhh-hHHHHHHH
Confidence            99 8887744444499999997 78888864

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.21  E-value=2.2e-06  Score=72.27  Aligned_cols=82  Identities=7%  Similarity=-0.015  Sum_probs=64.2

Q ss_pred             ceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCc--------hhH-HHHHHHHhhhCCCCccceeccc
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVT--------GIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~--------~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      +.||+|++|.||+             |.. .+..+++|........        ... +.+|+.++..+.|+++.... .
T Consensus         2 ~~l~~G~~~~vy~-------------~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~-~   66 (211)
T PRK14879          2 KLIKRGAEAEIYL-------------GDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPA-V   66 (211)
T ss_pred             cccccCceEEEEE-------------Eee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCe-E
Confidence            5789999999999             765 5678889976532211        112 78899999999999988777 6


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ++......+ ++|||+++++|.+++..
T Consensus        67 ~~~~~~~~~-lv~e~~~G~~L~~~~~~   92 (211)
T PRK14879         67 YFVDPENFI-IVMEYIEGEPLKDLINS   92 (211)
T ss_pred             EEEeCCCCE-EEEEEeCCcCHHHHHHh
Confidence            666667777 99999999999988753

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=98.20  E-value=2.4e-06  Score=71.50  Aligned_cols=79  Identities=16%  Similarity=0.239  Sum_probs=56.3

Q ss_pred             ceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCc--h-------hH-H-----------------HHH
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVT--G-------IF-F-----------------ARS  214 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~--~-------~~-f-----------------~~e  214 (282)
                      ..||+|+||.||+             +..++|..||+|.++.....  .       .. |                 ..|
T Consensus         3 ~~ig~G~~~~Vy~-------------a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   69 (190)
T cd05147           3 GCISTGKEANVYH-------------ATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKE   69 (190)
T ss_pred             CccccccceEEEE-------------EECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHH
Confidence            6799999999999             88778999999998653210  1       11 2                 349


Q ss_pred             HHHhhhCCCCccceeccceEeeCCeEEEEEEecCCCCCccccc
Q 043820          215 VTEVAKIYARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDR  257 (282)
Q Consensus       215 ~~~l~~l~H~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l  257 (282)
                      ...|.++.|+++.... ..  .....+ |||||+++++|...+
T Consensus        70 ~~~l~~l~~~~v~~p~-~~--~~~~~~-iVmE~i~g~~l~~~~  108 (190)
T cd05147          70 MRNLKRLVTAGIPCPE-PI--LLKSHV-LVMEFIGDDGWAAPR  108 (190)
T ss_pred             HHHHHHHHHCCCCCCc-EE--EecCCE-EEEEEeCCCCCcchh
Confidence            9999999888774433 22  222336 999999998876553

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.19  E-value=6.2e-07  Score=85.06  Aligned_cols=104  Identities=19%  Similarity=0.122  Sum_probs=74.9

Q ss_pred             cceecccCccceeccccccccccccceeecC-CCcEEEEEEccC--C--CCchhH-HHHHHHHhhhCCCCccceeccceE
Q 043820          161 NNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFA--G--SVTGIF-FARSVTEVAKIYARSRPRSYPSVV  234 (282)
Q Consensus       161 ~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~--~--~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~~  234 (282)
                      ..+||+|+|-+||+             |... .|.+||--.++-  -  +....+ |..|+.+|+.|+|+||++++ ..+
T Consensus        45 ~evLGrGafKtVYk-------------a~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy-~SW  110 (632)
T KOG0584|consen   45 DEVLGRGAFKTVYK-------------AFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFY-DSW  110 (632)
T ss_pred             hhhcccccceeeee-------------ccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeee-ehe
Confidence            37899999999999             7654 477777443321  1  122224 99999999999999999999 888


Q ss_pred             eeCCe--EEEEEEecCCCCCccccccCCCC---CcCCCCCc-cccceeccC
Q 043820          235 IRPGY--KVGLILELKPDPDPNPDRLHSSR---VRSLQYPD-PAQGFAIPS  279 (282)
Q Consensus       235 ~~~~~--~~~lv~Ey~~~GsL~~~l~~~~~---~~~l~W~~-R~~~~~~~~  279 (282)
                      .+...  .- +|+|+|..|+|..|+..-.+   +..-.|.+ =++|+.+-|
T Consensus       111 ~d~~n~~in-~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLH  160 (632)
T KOG0584|consen  111 VDTDNKTIN-FITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLH  160 (632)
T ss_pred             ecCCCceee-eeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhh
Confidence            77555  45 99999999999999875432   22346753 345665533

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.14  E-value=6.9e-07  Score=79.06  Aligned_cols=90  Identities=11%  Similarity=0.067  Sum_probs=71.0

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc-hhH---HHHHHHHhhhCCCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT-GIF---FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~-~~~---f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ++|...+.||+|.||+|..             +.-. .+..+|+|++++..-- ..+   -+.|-++|...+||-+..|.
T Consensus       168 ~dFdfLKvLGkGTFGKVIL-------------~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LK  234 (516)
T KOG0690|consen  168 EDFDFLKVLGKGTFGKVIL-------------CREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLK  234 (516)
T ss_pred             chhhHHHHhcCCccceEEE-------------EeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhh
Confidence            5677789999999999998             5544 5789999999765322 222   77899999999999998886


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                        +......+++.||||..+|.|..+|..+
T Consensus       235 --YsFQt~drlCFVMeyanGGeLf~HLsre  262 (516)
T KOG0690|consen  235 --YSFQTQDRLCFVMEYANGGELFFHLSRE  262 (516)
T ss_pred             --hhhccCceEEEEEEEccCceEeeehhhh
Confidence              5555555555999999999999998654

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.13  E-value=3.4e-06  Score=70.45  Aligned_cols=81  Identities=9%  Similarity=-0.007  Sum_probs=60.2

Q ss_pred             eecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCc--------hhH-HHHHHHHhhhCCCCccceeccce
Q 043820          163 KLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVT--------GIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       163 ~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~--------~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      .||+|+||.||+             +.. ++..+++|........        ... +.+|+.++..++|+++.... ..
T Consensus         1 ~ig~G~~~~vy~-------------~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~-~~   65 (199)
T TIGR03724         1 LIAKGAEAIIYL-------------GDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPV-VY   65 (199)
T ss_pred             CCCCCceEEEEE-------------eec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCE-EE
Confidence            479999999999             774 5678999986432211        113 77899999999988765544 45


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccC
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ....+..+ ++|||+++++|.+++..
T Consensus        66 ~~~~~~~~-lv~e~~~g~~l~~~~~~   90 (199)
T TIGR03724        66 DVDPDNKT-IVMEYIEGKPLKDVIEE   90 (199)
T ss_pred             EEECCCCE-EEEEEECCccHHHHHhh
Confidence            55566667 99999999999887644

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=98.11  E-value=2.6e-06  Score=81.15  Aligned_cols=89  Identities=15%  Similarity=0.113  Sum_probs=71.5

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhHHHHHHHHhhhCC-C-----Ccccee
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIFFARSVTEVAKIY-A-----RSRPRS  229 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~-H-----~nlv~l  229 (282)
                      .|...+.||+|.||.|.+             +... .++.||||+++....--..-..|+.+|..++ |     -|+|++
T Consensus       187 rY~V~e~LGkGtFGQVvk-------------~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm  253 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVK-------------AYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRM  253 (586)
T ss_pred             EEEEEEEecccccceeEE-------------EEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEe
Confidence            456679999999999999             6543 5899999999754322222677889988886 4     389999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccCCC
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      + ++....++.+ ||+|++.. +|.++|...+
T Consensus       254 ~-d~F~fr~Hlc-iVfELL~~-NLYellK~n~  282 (586)
T KOG0667|consen  254 L-DYFYFRNHLC-IVFELLST-NLYELLKNNK  282 (586)
T ss_pred             e-ecccccccee-eeehhhhh-hHHHHHHhcC
Confidence            9 9999999999 99999986 8999997654

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=98.09  E-value=2e-06  Score=74.32  Aligned_cols=81  Identities=14%  Similarity=0.203  Sum_probs=63.1

Q ss_pred             ccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH--HHHHHHH-hhhCCCCccceeccceEee
Q 043820          160 INNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF--FARSVTE-VAKIYARSRPRSYPSVVIR  236 (282)
Q Consensus       160 ~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~--f~~e~~~-l~~l~H~nlv~l~~g~~~~  236 (282)
                      ....||.|+||+|+|+.            .-+.|...|||+++...-..+.  ++.|... |..-..||||+++ |.+..
T Consensus        68 dlg~iG~G~fG~V~KM~------------hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfy-Ga~F~  134 (361)
T KOG1006|consen   68 DLGEIGNGAFGTVNKML------------HKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFY-GALFS  134 (361)
T ss_pred             HHHHhcCCcchhhhhhh------------cCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHh-hhhhc
Confidence            33789999999999952            2356889999999865553333  8888866 5555889999999 99998


Q ss_pred             CCeEEEEEEecCCCCCccc
Q 043820          237 PGYKVGLILELKPDPDPNP  255 (282)
Q Consensus       237 ~~~~~~lv~Ey~~~GsL~~  255 (282)
                      .+..+ +-||+|.- ||+.
T Consensus       135 EGdcW-iCMELMd~-SlDk  151 (361)
T KOG1006|consen  135 EGDCW-ICMELMDI-SLDK  151 (361)
T ss_pred             CCcee-eeHHHHhh-hHHH
Confidence            88888 99999964 4443

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=98.08  E-value=1.1e-05  Score=67.29  Aligned_cols=79  Identities=16%  Similarity=0.301  Sum_probs=56.9

Q ss_pred             cceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCc----------------------h----hH-HHH
Q 043820          161 NNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVT----------------------G----IF-FAR  213 (282)
Q Consensus       161 ~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~----------------------~----~~-f~~  213 (282)
                      ...||+|+||.||+             +...+|..||+|.++.....                      .    .. +..
T Consensus         2 ~~~ig~G~~~~Vy~-------------a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (190)
T cd05145           2 NGCISTGKEANVYH-------------ARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEK   68 (190)
T ss_pred             CceeecCCCcEEEE-------------EEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHH
Confidence            36899999999999             87768999999998754211                      0    11 457


Q ss_pred             HHHHhhhCCCCccceeccceEeeCCeEEEEEEecCCCCCcccc
Q 043820          214 SVTEVAKIYARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPD  256 (282)
Q Consensus       214 e~~~l~~l~H~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~  256 (282)
                      |...+.++.|+++.... .....  ..+ |||||++++++...
T Consensus        69 E~~~l~~l~~~~i~~p~-~~~~~--~~~-lVmE~~~g~~~~~~  107 (190)
T cd05145          69 EFRNLKRLYEAGVPVPE-PILLK--KNV-LVMEFIGDDGSPAP  107 (190)
T ss_pred             HHHHHHHHHhCCCCCce-EEEec--CCE-EEEEEecCCCchhh
Confidence            88999999999875444 33222  346 99999999865443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=98.07  E-value=8.2e-07  Score=84.88  Aligned_cols=90  Identities=12%  Similarity=0.179  Sum_probs=76.1

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceecc
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      +.++|.....+|.|.+|.|||             +... .+...|+|.++-.....-. ...|+-++...+|+|||.++ 
T Consensus        13 P~ddyellqrvgsgTygdvyK-------------aRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~-   78 (829)
T KOG0576|consen   13 PQDDYELLQRVGSGTYGDVYK-------------ARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYF-   78 (829)
T ss_pred             CccchhheeeecCCcccchhh-------------hcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHH-
Confidence            455677778999999999999             6543 4788899998766555555 88999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCcccccc
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~  258 (282)
                      |.....+..+ +.|||+.+|+|.+.-|
T Consensus        79 gsylr~dklw-icMEycgggslQdiy~  104 (829)
T KOG0576|consen   79 GSYLRRDKLW-ICMEYCGGGSLQDIYH  104 (829)
T ss_pred             hhhhhhcCcE-EEEEecCCCcccceee
Confidence            9998888888 9999999999988755

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.06  E-value=7.9e-06  Score=70.22  Aligned_cols=87  Identities=6%  Similarity=-0.043  Sum_probs=67.0

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH----------HHHHHHHhhhCCCC
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF----------FARSVTEVAKIYAR  224 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~----------f~~e~~~l~~l~H~  224 (282)
                      .++|...+.+|.|+||.||.             ... ++..+|+|.+.........          |.+|+..+.++.|+
T Consensus        30 ~~~y~~~~~l~~~~f~~v~l-------------~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~   95 (232)
T PRK10359         30 SYNIKTIKVFRNIDDTKVSL-------------IDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSE   95 (232)
T ss_pred             hCceEEEEEecCCCceEEEE-------------Eec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHC
Confidence            56788889999999999998             544 4668999999754322221          47899999999999


Q ss_pred             ccceeccceEeeC--------CeEEEEEEecCCCCCccccc
Q 043820          225 SRPRSYPSVVIRP--------GYKVGLILELKPDPDPNPDR  257 (282)
Q Consensus       225 nlv~l~~g~~~~~--------~~~~~lv~Ey~~~GsL~~~l  257 (282)
                      +|..+. .+....        ...+ |+|||+++.+|.++.
T Consensus        96 GI~~~~-d~~~~~~~~~~~~~~~~~-lvmEyi~G~tL~~~~  134 (232)
T PRK10359         96 GLASLN-DFYLLAERKTLRYAHTYI-MLIEYIEGVELNDMP  134 (232)
T ss_pred             CCCcce-EeeeecccccccccCCeE-EEEEEECCccHHHhh
Confidence            999887 664432        2456 999999999997763

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=98.04  E-value=8e-06  Score=70.06  Aligned_cols=74  Identities=8%  Similarity=-0.031  Sum_probs=59.4

Q ss_pred             cCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhHHHHHHHHhhhCCCCccceeccceEeeCCeEEEEEE
Q 043820          167 GGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRPRSYPSVVIRPGYKVGLIL  245 (282)
Q Consensus       167 G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~nlv~l~~g~~~~~~~~~~lv~  245 (282)
                      |.||.||+             +... +++.+|+|.+....    .+..|...+....|||+++++ +.+...+..+ ++|
T Consensus         4 g~~~~v~~-------------~~~~~~~~~~~~K~i~~~~----~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~-lv~   64 (237)
T cd05576           4 GVIDKVLL-------------VMDTRTQQTFILKGLRKSS----EYSRERLTIIPHCVPNMVCLH-KYIVSEDSVF-LVL   64 (237)
T ss_pred             cccceEEE-------------EEEccCCcEEEEEeecchh----hhhhHHHHHHhcCCCceeehh-hheecCCeEE-EEE
Confidence            78999999             6544 57899999986432    244555556667899999999 9988888888 999


Q ss_pred             ecCCCCCccccccC
Q 043820          246 ELKPDPDPNPDRLH  259 (282)
Q Consensus       246 Ey~~~GsL~~~l~~  259 (282)
                      ||+++|+|.+++..
T Consensus        65 e~~~~~~L~~~l~~   78 (237)
T cd05576          65 QHAEGGKLWSHISK   78 (237)
T ss_pred             ecCCCCCHHHHHHH
Confidence            99999999998854

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=97.98  E-value=1.6e-05  Score=66.61  Aligned_cols=89  Identities=17%  Similarity=0.215  Sum_probs=62.7

Q ss_pred             HHHHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCc----------------------
Q 043820          150 TIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVT----------------------  207 (282)
Q Consensus       150 el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~----------------------  207 (282)
                      ++......+...+.||+|+||.||+             +...+|..||||.++.....                      
T Consensus         9 ~~~~~~~~~~~~~~i~~G~~g~Vy~-------------~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (198)
T cd05144           9 TLVKRGVVESLGNQIGVGKESDVYL-------------ALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYL   75 (198)
T ss_pred             HHHHcCchhhcCCccccCcceEEEE-------------EEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHH
Confidence            4444444466678999999999999             87778999999986532200                      


Q ss_pred             hhH-HHHHHHHhhhCCCCc--cceeccceEeeCCeEEEEEEecCCCCCccccc
Q 043820          208 GIF-FARSVTEVAKIYARS--RPRSYPSVVIRPGYKVGLILELKPDPDPNPDR  257 (282)
Q Consensus       208 ~~~-f~~e~~~l~~l~H~n--lv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l  257 (282)
                      ... +..|...+..+.|++  +++.+ +    ....+ ++|||+++++|.+.+
T Consensus        76 ~~~~~~~E~~~l~~l~~~~i~v~~~~-~----~~~~~-lv~e~~~g~~L~~~~  122 (198)
T cd05144          76 SRLAAQKEFAALKALYEEGFPVPKPI-D----WNRHA-VVMEYIDGVELYRVR  122 (198)
T ss_pred             hHHHHHHHHHHHHHHHHcCCCCCcee-e----cCCce-EEEEEeCCcchhhcc
Confidence            011 567888888888874  33444 3    23446 999999999987764

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=97.97  E-value=7.7e-06  Score=77.33  Aligned_cols=87  Identities=15%  Similarity=0.172  Sum_probs=68.2

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC------chhH---HHHHHHHhhhCC---C
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV------TGIF---FARSVTEVAKIY---A  223 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~------~~~~---f~~e~~~l~~l~---H  223 (282)
                      +|+....+|+|+||.|+.             +..+ +..+|.+|++.+..-      .+.+   .-.|+.+|..++   |
T Consensus       562 ~yttlq~lG~GAyGkV~l-------------ai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH  628 (772)
T KOG1152|consen  562 DYTTLQPLGEGAYGKVNL-------------AIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSH  628 (772)
T ss_pred             cceeeeeccccccceEEE-------------eeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCc
Confidence            466778999999999999             6655 367899999975421      1112   678999999997   9


Q ss_pred             CccceeccceEeeCCeEEEEEEecC-CCCCcccccc
Q 043820          224 RSRPRSYPSVVIRPGYKVGLILELK-PDPDPNPDRL  258 (282)
Q Consensus       224 ~nlv~l~~g~~~~~~~~~~lv~Ey~-~~GsL~~~l~  258 (282)
                      +||++++ .+..+++..+ |++|-. ++-+|.++|-
T Consensus       629 ~NIlKlL-dfFEddd~yy-l~te~hg~gIDLFd~IE  662 (772)
T KOG1152|consen  629 ENILKLL-DFFEDDDYYY-LETEVHGEGIDLFDFIE  662 (772)
T ss_pred             cchhhhh-heeecCCeeE-EEecCCCCCcchhhhhh
Confidence            9999999 9988888877 999964 5567777774

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=97.95  E-value=3e-06  Score=77.92  Aligned_cols=91  Identities=16%  Similarity=0.149  Sum_probs=72.5

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCC---CCchhH-HHHHHHHhhhCCCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAG---SVTGIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~---~~~~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      +.|+.-++||+|+||.||-             +... .|.-+|.|.+.+.   ..+++. -++|-.++.+++.+-||.|-
T Consensus       185 n~F~~~RvlGkGGFGEV~a-------------cqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVsla  251 (591)
T KOG0986|consen  185 NTFRVYRVLGKGGFGEVCA-------------CQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLA  251 (591)
T ss_pred             cceeeeEEEecccccceeE-------------EEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEe
Confidence            4477779999999999998             5544 4778888888653   234445 88999999999999999985


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCCC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                        +..+....++||+..|.+|||..+|++..
T Consensus       252 --YAfeTkd~LClVLtlMNGGDLkfHiyn~g  280 (591)
T KOG0986|consen  252 --YAFETKDALCLVLTLMNGGDLKFHIYNHG  280 (591)
T ss_pred             --eeecCCCceEEEEEeecCCceeEEeeccC
Confidence              65565555569999999999999998754

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=97.93  E-value=2e-05  Score=76.74  Aligned_cols=90  Identities=17%  Similarity=0.171  Sum_probs=57.1

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecC-C----CcEEEEEEccCCCCchhHHHHHHHHhhhCCCCccce
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-D----ARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRPR  228 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~----~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~nlv~  228 (282)
                      ..++|...+.||+|+||.||+             |... +    +..||+|++..... .+.+..|.  +....+.+++.
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYk-------------a~~~~~~~~~~~~vAvK~~~~~~~-~e~~~~e~--l~~~~~~~~~~  193 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYK-------------ASLVNKQSKKEGKYVLKKATEYGA-VEIWMNER--VRRACPNSCAD  193 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEE-------------EEEcCCccccCcEEEEEEecccch-hHHHHHHH--HHhhchhhHHH
Confidence            567899999999999999999             7654 3    68999998764221 11132221  12222222222


Q ss_pred             eccce-----EeeCCeEEEEEEecCCCCCccccccCC
Q 043820          229 SYPSV-----VIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       229 l~~g~-----~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +..++     +......+ |||||+++|+|.+++...
T Consensus       194 ~~~~~~~~~~~~~~~~~~-LV~ey~~~gsL~~~l~~~  229 (566)
T PLN03225        194 FVYGFLEPVSSKKEDEYW-LVWRYEGESTLADLMQSK  229 (566)
T ss_pred             HHHhhhcccccccCCceE-EEEEecCCCcHHHHHHhc
Confidence            22011     13445566 999999999999988653

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=97.92  E-value=4.7e-06  Score=78.30  Aligned_cols=98  Identities=16%  Similarity=0.198  Sum_probs=75.6

Q ss_pred             CccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCc--hhH-HHHHHHHhhhC-CCCccceeccc
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVT--GIF-FARSVTEVAKI-YARSRPRSYPS  232 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~--~~~-f~~e~~~l~~l-~H~nlv~l~~g  232 (282)
                      .|+..+.||.||...||+             ....+.+.+|+|++......  ... |.+|+.+|.+| .|.+||+|+ .
T Consensus       362 ~Yeilk~iG~GGSSkV~k-------------V~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~-D  427 (677)
T KOG0596|consen  362 EYEILKQIGSGGSSKVFK-------------VLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLY-D  427 (677)
T ss_pred             hhhHHHhhcCCCcceeee-------------eecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEe-e
Confidence            366778999999999999             76667778888877543332  233 99999999999 799999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      +-...+..| |||||=+ -||.++|.... ....+|..|
T Consensus       428 YEv~d~~lY-mvmE~Gd-~DL~kiL~k~~-~~~~~~~lk  463 (677)
T KOG0596|consen  428 YEVTDGYLY-MVMECGD-IDLNKILKKKK-SIDPDWFLK  463 (677)
T ss_pred             eeccCceEE-EEeeccc-ccHHHHHHhcc-CCCchHHHH
Confidence            988888888 9999754 58998887654 334556443

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=97.92  E-value=1.6e-06  Score=75.09  Aligned_cols=85  Identities=14%  Similarity=0.092  Sum_probs=68.9

Q ss_pred             ceecccCccceeccccccccccccceeecCCCcEEEEEEccCCC--CchhH-HHHHHHHhhhCCCCccceeccceEeeCC
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGS--VTGIF-FARSVTEVAKIYARSRPRSYPSVVIRPG  238 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~--~~~~~-f~~e~~~l~~l~H~nlv~l~~g~~~~~~  238 (282)
                      .+|.+.-.|..|+             |.+. |..+.+|++....  ....+ |..|...++-+.||||+.++ |.|..++
T Consensus       196 tkl~e~hsgelwr-------------grwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvl-gacnspp  260 (448)
T KOG0195|consen  196 TKLAESHSGELWR-------------GRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVL-GACNSPP  260 (448)
T ss_pred             hhhccCCCccccc-------------cccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhh-hhccCCC
Confidence            4677777888888             7774 4556667765432  22334 99999999999999999999 9999999


Q ss_pred             eEEEEEEecCCCCCccccccCCCC
Q 043820          239 YKVGLILELKPDPDPNPDRLHSSR  262 (282)
Q Consensus       239 ~~~~lv~Ey~~~GsL~~~l~~~~~  262 (282)
                      +.. +|..|||.|||...||..++
T Consensus       261 nlv-~isq~mp~gslynvlhe~t~  283 (448)
T KOG0195|consen  261 NLV-IISQYMPFGSLYNVLHEQTS  283 (448)
T ss_pred             Cce-EeeeeccchHHHHHHhcCcc
Confidence            999 99999999999999998763

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=97.85  E-value=6.2e-06  Score=71.58  Aligned_cols=88  Identities=13%  Similarity=0.113  Sum_probs=69.7

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC--ch---h---H-HHHHHHHhhhC-CCCc
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV--TG---I---F-FARSVTEVAKI-YARS  225 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~--~~---~---~-f~~e~~~l~~l-~H~n  225 (282)
                      +|...+.||.|..+.|.+             .... .|.+.|+|++.....  .+   .   + -..|+.+|+++ .||+
T Consensus        18 ~y~pkeilgrgvss~vrR-------------ci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~   84 (411)
T KOG0599|consen   18 KYEPKEILGRGVSSVVRR-------------CIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPY   84 (411)
T ss_pred             hcChHHHhcccchhhhhh-------------hhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCc
Confidence            455668899999999888             5443 578999998864321  11   1   2 56889999998 8999


Q ss_pred             cceeccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          226 RPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       226 lv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      |+.|. .....+...+ +|+|+|+.|.|.++|-+
T Consensus        85 II~l~-D~yes~sF~F-lVFdl~prGELFDyLts  116 (411)
T KOG0599|consen   85 IIDLQ-DVYESDAFVF-LVFDLMPRGELFDYLTS  116 (411)
T ss_pred             EEEee-eeccCcchhh-hhhhhcccchHHHHhhh
Confidence            99999 8888777777 99999999999999964

>cd01100 APPLE_Factor_XI_like Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins

Probab=97.83  E-value=2.4e-05  Score=54.87  Aligned_cols=45  Identities=13%  Similarity=0.332  Sum_probs=34.9

Q ss_pred             CCCCCceee----cCCCHHHHHHHhhcCCCceeEeeccccCCCceeEEeccc
Q 043820            4 PDATPSRVS----KSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGE   51 (282)
Q Consensus         4 pd~~~~~~~----~~~~~~~C~~~Cl~nCsC~a~~~~~~~~~~~~C~~~~~~   51 (282)
                      +++++.+++    ...+.++|++.|+.+++|.||.|..   +.+.|+++...
T Consensus        10 ~~~~~~g~d~~~~~~~s~~~Cq~~C~~~~~C~afT~~~---~~~~C~lk~~~   58 (73)
T cd01100          10 SNVDFRGGDLSTVFASSAEQCQAACTADPGCLAFTYNT---KSKKCFLKSSE   58 (73)
T ss_pred             CCCccccCCcceeecCCHHHHHHHcCCCCCceEEEEEC---CCCeEEcccCC
Confidence            455555433    4568999999999999999999974   45789997654

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=97.82  E-value=1e-05  Score=77.34  Aligned_cols=99  Identities=15%  Similarity=0.153  Sum_probs=74.3

Q ss_pred             cCHHHHHHhccC---ccccceecccCccceeccccccccccccceeecCC-CcEEEEEEccCCCCc---hhH-HHHHHHH
Q 043820          146 FELATIANATDN---FSINNKLGEGGFGPVYKVVAAGICFAGTITGARID-ARVVAARIVFAGSVT---GIF-FARSVTE  217 (282)
Q Consensus       146 ~~~~el~~at~~---f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~-~~~vAvK~l~~~~~~---~~~-f~~e~~~  217 (282)
                      -.|--|++|.-+   |...+.||-|+||.|..             ..-.| ...+|.|.|.+....   ... ...|-.+
T Consensus       616 SnYiRLkRaKMdKSmFvkik~iGvGAFGeV~L-------------v~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDI  682 (1034)
T KOG0608|consen  616 SNYIRLKRAKMDKSMFVKIKTIGVGAFGEVCL-------------VRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDI  682 (1034)
T ss_pred             hhHHHHHHhhccccceEEEeeecccccceeEE-------------EeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhh
Confidence            455566666533   77778999999999998             44333 467899988754322   222 7889999


Q ss_pred             hhhCCCCccceeccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          218 VAKIYARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       218 l~~l~H~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      |.......+|+|+ =.+.+.+.+| +||||+++|++..+|..
T Consensus       683 LAEADn~WVVrLy-ySFQDkdnLY-FVMdYIPGGDmMSLLIr  722 (1034)
T KOG0608|consen  683 LAEADNEWVVRLY-YSFQDKDNLY-FVMDYIPGGDMMSLLIR  722 (1034)
T ss_pred             HhhcCCcceEEEE-EEeccCCceE-EEEeccCCccHHHHHHH
Confidence            9999999999999 4555566667 99999999999887753

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=97.73  E-value=8.1e-05  Score=58.10  Aligned_cols=78  Identities=15%  Similarity=0.044  Sum_probs=61.9

Q ss_pred             cceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCC--CccceeccceEeeC
Q 043820          161 NNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF-FARSVTEVAKIYA--RSRPRSYPSVVIRP  237 (282)
Q Consensus       161 ~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H--~nlv~l~~g~~~~~  237 (282)
                      .+.+|+|.++.||+             +...+ ..+++|.......  .. +..|+..+..++|  .++++++ +.....
T Consensus         3 ~~~i~~g~~~~v~~-------------~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~-~~~~~~   65 (155)
T cd05120           3 IKLLKGGLTNRVYL-------------LGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVL-ASGESD   65 (155)
T ss_pred             ceecccccccceEE-------------EEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEE-EEcCCC
Confidence            47899999999999             76543 7899998865433  34 9999999999976  4888888 776666


Q ss_pred             CeEEEEEEecCCCCCcccc
Q 043820          238 GYKVGLILELKPDPDPNPD  256 (282)
Q Consensus       238 ~~~~~lv~Ey~~~GsL~~~  256 (282)
                      +..+ +++||++++.+..+
T Consensus        66 ~~~~-~v~e~~~g~~~~~~   83 (155)
T cd05120          66 GWSY-LLMEWIEGETLDEV   83 (155)
T ss_pred             CccE-EEEEecCCeecccC
Confidence            6677 99999999988653

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.73  E-value=2.2e-05  Score=70.00  Aligned_cols=91  Identities=11%  Similarity=0.030  Sum_probs=69.4

Q ss_pred             cCccccceecccCccceeccccccccccccceeecCC-CcEEEEEEccCCCCchh---H-HHHHHHHhhhC-CCCcccee
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARID-ARVVAARIVFAGSVTGI---F-FARSVTEVAKI-YARSRPRS  229 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~-~~~vAvK~l~~~~~~~~---~-f~~e~~~l~~l-~H~nlv~l  229 (282)
                      .+|.+.++||+|++.+|..             ..+.. .+.+|+|.+++......   . ...|-.+..+. +||-+|.|
T Consensus       250 ~df~ll~vigrgsyakvl~-------------~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvgl  316 (593)
T KOG0695|consen  250 QDFDLLRVIGRGSYAKVLL-------------VRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGL  316 (593)
T ss_pred             ccceeeeeecCcchhhhhh-------------eehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEeh
Confidence            4578889999999999998             66653 57889999876543332   2 67777776665 89999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccCCC
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      + .+..+....+ .|.||+++|+|..++..++
T Consensus       317 h-scfqtesrlf-fvieyv~ggdlmfhmqrqr  346 (593)
T KOG0695|consen  317 H-SCFQTESRLF-FVIEYVNGGDLMFHMQRQR  346 (593)
T ss_pred             h-hhhcccceEE-EEEEEecCcceeeehhhhh
Confidence            9 6655555555 9999999999988876543

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.72  E-value=6.4e-06  Score=75.12  Aligned_cols=95  Identities=17%  Similarity=0.089  Sum_probs=70.2

Q ss_pred             HHHHHhccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC---chhH-HHHHHHHhhhC-C
Q 043820          149 ATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV---TGIF-FARSVTEVAKI-Y  222 (282)
Q Consensus       149 ~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~---~~~~-f~~e~~~l~~l-~  222 (282)
                      .+..+++ +|....+||.|+||+|..             +... ....+|||++++..-   .+.+ -+.|-++|.-. +
T Consensus       343 ~d~i~~t-DFnFl~VlGKGSFGKVlL-------------aerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~k  408 (683)
T KOG0696|consen  343 RDRIKAT-DFNFLMVLGKGSFGKVLL-------------AERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGK  408 (683)
T ss_pred             ccceeec-ccceEEEeccCccceeee-------------ecccCcchhhhhhhhccceeeecCcccceehhhhheecCCC
Confidence            3433343 577779999999999999             6543 346789999976532   2233 66777777766 4


Q ss_pred             CCccceeccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          223 ARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       223 H~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      -|-||+|+ .+..+-+..+ .||||+.+|+|..+|.+
T Consensus       409 ppFL~qlH-ScFQTmDRLy-FVMEyvnGGDLMyhiQQ  443 (683)
T KOG0696|consen  409 PPFLVQLH-SCFQTMDRLY-FVMEYVNGGDLMYHIQQ  443 (683)
T ss_pred             CchHHHHH-HHhhhhhhee-eEEEEecCchhhhHHHH
Confidence            57789998 7777777777 99999999999988864

>smart00090 RIO RIO-like kinase

Probab=97.65  E-value=0.0001  Score=63.82  Aligned_cols=83  Identities=17%  Similarity=0.270  Sum_probs=59.5

Q ss_pred             CccccceecccCccceeccccccccccccceee--cCCCcEEEEEEccCCCCc--------------------h---h-H
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGA--RIDARVVAARIVFAGSVT--------------------G---I-F  210 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~--~~~~~~vAvK~l~~~~~~--------------------~---~-~  210 (282)
                      .|...+.||+|+||.||+             +.  ..+|..||+|.+......                    .   . .
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~-------------a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (237)
T smart00090       29 LSAIGGCISTGKEANVYH-------------ALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRL   95 (237)
T ss_pred             hHHhCCeeccCcceeEEE-------------EEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHH
Confidence            466778999999999999             87  567899999988643210                    0   1 2


Q ss_pred             -HHHHHHHhhhCCCCc--cceeccceEeeCCeEEEEEEecCCCCCcccccc
Q 043820          211 -FARSVTEVAKIYARS--RPRSYPSVVIRPGYKVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       211 -f~~e~~~l~~l~H~n--lv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~  258 (282)
                       +..|...+.++.+..  +.+++ +.    ...+ +||||+++++|...+.
T Consensus        96 ~~~~E~~~L~~L~~~~i~~p~~~-~~----~~~~-lV~E~~~g~~L~~~~~  140 (237)
T smart00090       96 WAEKEFRNLQRLYEAGVPVPKPI-AW----RRNV-LVMEFIGGDGLPAPRL  140 (237)
T ss_pred             HHHHHHHHHHHHHhcCCCCCeee-Ee----cCce-EEEEEecCCccccccc
Confidence             568999999997633  33444 32    2346 9999999999877653

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=97.64  E-value=1.1e-05  Score=68.31  Aligned_cols=82  Identities=18%  Similarity=0.299  Sum_probs=65.6

Q ss_pred             ccCccccceecccCccceeccccccccccccceee-cCCCcEEEEEEccCCCCchhH-HHHHHHHhhhCC-CCccceecc
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGA-RIDARVVAARIVFAGSVTGIF-FARSVTEVAKIY-ARSRPRSYP  231 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~-~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~-H~nlv~l~~  231 (282)
                      .++|++.+++|+|.++.||.             |. ..+...+.||.++.-   ..+ ..+|+.+|..|. |+||++|+ 
T Consensus        37 ~ddYeivrk~GRGKYSEVFe-------------g~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~-   99 (338)
T KOG0668|consen   37 QDDYEIVRKVGRGKYSEVFE-------------GINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLL-   99 (338)
T ss_pred             cchHHHHHHHcCccHhhHhc-------------ccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehh-
Confidence            35677889999999999999             65 446788899998642   223 899999999995 99999999 


Q ss_pred             ceEeeCC--eEEEEEEecCCCCCcc
Q 043820          232 SVVIRPG--YKVGLILELKPDPDPN  254 (282)
Q Consensus       232 g~~~~~~--~~~~lv~Ey~~~GsL~  254 (282)
                      ....++.  ... ||+||+.|-+..
T Consensus       100 DiV~Dp~Sktpa-LiFE~v~n~Dfk  123 (338)
T KOG0668|consen  100 DIVKDPESKTPS-LIFEYVNNTDFK  123 (338)
T ss_pred             hhhcCccccCch-hHhhhhccccHH
Confidence            8877644  446 999999987654

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=97.55  E-value=7.6e-05  Score=68.03  Aligned_cols=90  Identities=17%  Similarity=0.222  Sum_probs=72.2

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecC----CCcEEEEEEccCCCCchhHHHHHHHHhhhC-CCCccce
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI----DARVVAARIVFAGSVTGIFFARSVTEVAKI-YARSRPR  228 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~----~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l-~H~nlv~  228 (282)
                      ..+.|...++||+|.|++||+             +.+.    ....||+|.+...+.. ....+|+++|..+ .+.|+++
T Consensus        34 ~~~~~~~v~kigeGsFssv~~-------------a~~~~~~~~~~~valk~i~~ts~p-~ri~~El~~L~~~gG~~ni~~   99 (418)
T KOG1167|consen   34 ISNAYKVVNKIGEGSFSSVYK-------------ATDIEQDTKRRYVALKAIYRTSSP-SRILNELEMLYRLGGSDNIIK   99 (418)
T ss_pred             hhhhhhhhccccccchhhhhh-------------hhHhhhccccceEeeeecccccCc-hHHHHHHHHHHHhccchhhhc
Confidence            345577789999999999999             5532    3578999998653322 2288999999998 7899999


Q ss_pred             eccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          229 SYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       229 l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +. ++...++... +|+||++.-+-.++.++
T Consensus       100 ~~-~~~rnnd~v~-ivlp~~~H~~f~~l~~~  128 (418)
T KOG1167|consen  100 LN-GCFRNNDQVA-IVLPYFEHDRFRDLYRS  128 (418)
T ss_pred             ch-hhhccCCeeE-EEecccCccCHHHHHhc
Confidence            99 9888888888 99999998887777654

>PRK12274 serine/threonine protein kinase; Provisional

Probab=97.33  E-value=0.00064  Score=57.69  Aligned_cols=78  Identities=14%  Similarity=0.074  Sum_probs=58.4

Q ss_pred             ccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCc----hhH-HHHHHHHhhhCC-CCccceeccce
Q 043820          160 INNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVT----GIF-FARSVTEVAKIY-ARSRPRSYPSV  233 (282)
Q Consensus       160 ~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~----~~~-f~~e~~~l~~l~-H~nlv~l~~g~  233 (282)
                      ....|++|+||+||.             ..- .+..++.+.+......    ... |.+|+.+|.+++ |+++++++ ++
T Consensus         6 ~~~~l~~~~f~~v~~-------------~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll-~~   70 (218)
T PRK12274          6 VNEPLKSDTFGRILL-------------VRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLL-HW   70 (218)
T ss_pred             cceeecCCCcceEEE-------------eec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEE-EE
Confidence            347899999999998             544 5677777777654331    123 889999999995 57899998 65


Q ss_pred             EeeCCeEEEEEEecCCCCCccccc
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDR  257 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l  257 (282)
                          +..+ ++|||+++.+|.+.+
T Consensus        71 ----~~~~-lvmeyI~G~~L~~~~   89 (218)
T PRK12274         71 ----DGRH-LDRSYLAGAAMYQRP   89 (218)
T ss_pred             ----cCEE-EEEeeecCccHHhhh
Confidence                3456 999999999987654

>cd05119 RIO RIO kinase family, catalytic domain

Probab=97.32  E-value=0.00049  Score=56.64  Aligned_cols=74  Identities=19%  Similarity=0.308  Sum_probs=47.5

Q ss_pred             ceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH---H----------------------HHHHH
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF---F----------------------ARSVT  216 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~---f----------------------~~e~~  216 (282)
                      +.||+|+||.||+             +...++..||||.+.........   +                      ..|..
T Consensus         3 ~~lg~G~~g~Vy~-------------a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~   69 (187)
T cd05119           3 GPIGTGKEADVYL-------------ALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFR   69 (187)
T ss_pred             cccccccceeEEE-------------EECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHH
Confidence            6799999999999             87777899999987643221111   1                      34555


Q ss_pred             HhhhCCCCc--cceeccceEeeCCeEEEEEEecCCCCCcc
Q 043820          217 EVAKIYARS--RPRSYPSVVIRPGYKVGLILELKPDPDPN  254 (282)
Q Consensus       217 ~l~~l~H~n--lv~l~~g~~~~~~~~~~lv~Ey~~~GsL~  254 (282)
                      .+..+.+..  +.+.+ +.    ...+ ++|||+++|.+.
T Consensus        70 ~l~~l~~~~~~~~~~~-~~----~~~~-lv~e~~~g~~~~  103 (187)
T cd05119          70 NLKRLYEAGVPVPKPI-DL----NRHV-LVMEFIGGDGIP  103 (187)
T ss_pred             HHHHHHHcCCCCCceE-ec----CCCE-EEEEEeCCCCcc
Confidence            555554432  23333 22    2346 999999996543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=97.28  E-value=0.00013  Score=63.53  Aligned_cols=89  Identities=19%  Similarity=0.236  Sum_probs=66.5

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhHHHHHHHHhhhC-CCCccceeccceE
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIFFARSVTEVAKI-YARSRPRSYPSVV  234 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l-~H~nlv~l~~g~~  234 (282)
                      .|.+...||+|.||.+..             +..+ ..+.+++|.++........|.+|-.---.| .|.||+.-+ .+.
T Consensus        25 ~y~I~k~lgeG~FgkIlL-------------~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY-~va   90 (378)
T KOG1345|consen   25 VYTINKQLGEGRFGKILL-------------AEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTY-EVA   90 (378)
T ss_pred             hhhHHHHhcccceeeEEe-------------eeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHH-HHH
Confidence            466678999999999998             5543 568899998876444333399988764455 689999877 665


Q ss_pred             eeCCeEEEEEEecCCCCCccccccC
Q 043820          235 IRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       235 ~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ......|..++||+|.|||.+-+-.
T Consensus        91 Fqt~d~YvF~qE~aP~gdL~snv~~  115 (378)
T KOG1345|consen   91 FQTSDAYVFVQEFAPRGDLRSNVEA  115 (378)
T ss_pred             hhcCceEEEeeccCccchhhhhcCc
Confidence            5544455599999999999887654

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=97.25  E-value=4.7e-05  Score=66.97  Aligned_cols=88  Identities=15%  Similarity=0.101  Sum_probs=64.1

Q ss_pred             ccCcccc-ceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhHHHHHHHH-hhhCCCCccceecc
Q 043820          155 TDNFSIN-NKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIFFARSVTE-VAKIYARSRPRSYP  231 (282)
Q Consensus       155 t~~f~~~-~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~f~~e~~~-l~~l~H~nlv~l~~  231 (282)
                      |++|++. .+||-|--|.|..             +..+ .+..+|+|.+.....    -.+|+++ +..-.|+|||+++ 
T Consensus        60 tedY~is~qvLG~GinGkV~~-------------C~~k~T~ekfALKvL~Ds~K----ARrEVeLHw~~s~h~~iV~Ii-  121 (400)
T KOG0604|consen   60 TEDYSISWQVLGAGINGKVVQ-------------CVHKRTQEKFALKVLLDSPK----ARREVELHWMASGHPHIVSII-  121 (400)
T ss_pred             hhhheehhhhhccccCCceEE-------------EEeccchhhhHHHHHhcCHH----HHhHhhhhhhhcCCCceEEee-
Confidence            4555543 5799999999998             6544 478899998864322    5677766 3344899999998 


Q ss_pred             ceEee----CCeEEEEEEecCCCCCccccccCCC
Q 043820          232 SVVIR----PGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       232 g~~~~----~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      .+...    ....+ +|||+|++|+|...|.+..
T Consensus       122 dVyeNs~~~rkcLL-iVmE~meGGeLfsriq~~g  154 (400)
T KOG0604|consen  122 DVYENSYQGRKCLL-IVMECMEGGELFSRIQDRG  154 (400)
T ss_pred             hhhhhhccCceeeE-eeeecccchHHHHHHHHcc
Confidence            77543    33456 9999999999999886544

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=97.24  E-value=0.00058  Score=64.47  Aligned_cols=82  Identities=13%  Similarity=0.106  Sum_probs=56.7

Q ss_pred             ceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCch---------------------------------
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTG---------------------------------  208 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~---------------------------------  208 (282)
                      +.||.|++|+||+             +.+.+|..||||.........                                 
T Consensus       123 ~plasaSigQVh~-------------A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e  189 (437)
T TIGR01982       123 KPLAAASIAQVHR-------------ARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKE  189 (437)
T ss_pred             cceeeeehhheEE-------------EEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHH
Confidence            6799999999999             999999999999986542110                                 


Q ss_pred             ------hH--HHHHHHHhhhC----CCCccceeccceEee-CCeEEEEEEecCCCCCcccccc
Q 043820          209 ------IF--FARSVTEVAKI----YARSRPRSYPSVVIR-PGYKVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       209 ------~~--f~~e~~~l~~l----~H~nlv~l~~g~~~~-~~~~~~lv~Ey~~~GsL~~~l~  258 (282)
                            .+  |.+|+..+.++    +|.+-+.+. ..+.+ ....+ |||||+++++|.+++.
T Consensus       190 ~~~~l~~Eldf~~Ea~n~~~~~~~~~~~~~v~vP-~v~~~~~~~~v-LvmE~i~G~~L~~~~~  250 (437)
T TIGR01982       190 FEKTLRRELDLRREAANASELGENFKNDPGVYVP-EVYWDRTSERV-LTMEWIDGIPLSDIAA  250 (437)
T ss_pred             HHHHHHHHHCHHHHHHHHHHHHHhcCCCCCEEeC-CEehhhcCCce-EEEEeECCcccccHHH
Confidence                  01  44555544444    344445554 44433 34456 9999999999988764

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>PHA02882 putative serine/threonine kinase; Provisional

Probab=97.15  E-value=0.0013  Score=58.24  Aligned_cols=79  Identities=22%  Similarity=0.256  Sum_probs=50.2

Q ss_pred             cCccccceecccCccceeccccccccccccceeecCC----CcEEEEEEccCCCCch--h---------H-HHHHHHHhh
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARID----ARVVAARIVFAGSVTG--I---------F-FARSVTEVA  219 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~----~~~vAvK~l~~~~~~~--~---------~-f~~e~~~l~  219 (282)
                      +.|...+.||+|+||.||+             +...+    +..+|+|.........  +         . ...+...+.
T Consensus        12 ~~y~i~~~LG~G~fG~Vy~-------------~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~   78 (294)
T PHA02882         12 KEWKIDKLIGCGGFGCVYE-------------TQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIH   78 (294)
T ss_pred             CceEEeeEEecCCCceEEE-------------EEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhc
Confidence            4678889999999999999             66443    3456666543221110  1         0 223334456


Q ss_pred             hCCCCccceeccceEeeCC----eEEEEEEecCC
Q 043820          220 KIYARSRPRSYPSVVIRPG----YKVGLILELKP  249 (282)
Q Consensus       220 ~l~H~nlv~l~~g~~~~~~----~~~~lv~Ey~~  249 (282)
                      .++|+|+++++ +++....    ..+ +++|++.
T Consensus        79 ~~~h~~i~~~~-~~~~~~~~~~~~~~-~~~~~~~  110 (294)
T PHA02882         79 NIDHLGIPKYY-GCGSFKRCRMYYRF-ILLEKLV  110 (294)
T ss_pred             cCCCCCCCcEE-EeeeEecCCceEEE-EEEehhc
Confidence            78999999999 8765543    234 7777654

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.15  E-value=1.5e-05  Score=68.46  Aligned_cols=87  Identities=16%  Similarity=0.185  Sum_probs=62.4

Q ss_pred             ccceecccCccceeccccccccccccceeecC-CCcEEEEEEccC-CCCch-hH-HHHHHHHhhhCCCCccceeccceEe
Q 043820          160 INNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFA-GSVTG-IF-FARSVTEVAKIYARSRPRSYPSVVI  235 (282)
Q Consensus       160 ~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~-~~~~~-~~-f~~e~~~l~~l~H~nlv~l~~g~~~  235 (282)
                      ...++|+|.||.||+             +... .|..||+|.+-- ....+ .. -++|+.++..+.|+|++.++ ..|.
T Consensus        21 k~~kigqGtfgeVFk-------------Ar~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nli-Eic~   86 (376)
T KOG0669|consen   21 KLAKIGQGTFGEVFK-------------ARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI-EICR   86 (376)
T ss_pred             HHHhcCCchHHHHHH-------------HhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHH-HHHh
Confidence            337899999999999             6544 467788886532 11111 22 78999999999999999999 8886


Q ss_pred             eCC---e----EEEEEEecCCCCCccccccCCC
Q 043820          236 RPG---Y----KVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       236 ~~~---~----~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      ...   .    .++||+.+++. +|.-.|.+..
T Consensus        87 tk~Tp~~r~r~t~ylVf~~ceh-DLaGlLsn~~  118 (376)
T KOG0669|consen   87 TKATPTNRDRATFYLVFDFCEH-DLAGLLSNRK  118 (376)
T ss_pred             hccCCcccccceeeeeHHHhhh-hHHHHhcCcc
Confidence            421   1    13499999986 6777775543

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=97.09  E-value=0.00022  Score=70.12  Aligned_cols=82  Identities=21%  Similarity=0.186  Sum_probs=63.3

Q ss_pred             ccccceecccCccc-eeccccccccccccceeecCCCcEEEEEEccCCCCchhH-HHHHHHHhhhC-CCCccceeccceE
Q 043820          158 FSINNKLGEGGFGP-VYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF-FARSVTEVAKI-YARSRPRSYPSVV  234 (282)
Q Consensus       158 f~~~~~lG~G~fG~-Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l-~H~nlv~l~~g~~  234 (282)
                      |...+.+|.|+-|+ ||+             |.. +|+.||||++-..   ... -.+|+..++.- .|+||||.+ |.-
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~-------------G~y-e~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyy-c~E  572 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFR-------------GVY-EGREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYY-CSE  572 (903)
T ss_pred             eccHHHcccCCCCcEEEE-------------Eee-CCceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEE-eec
Confidence            45557788998877 577             776 5789999988432   222 57899998887 799999999 665


Q ss_pred             eeCCeEEEEEEecCCCCCccccccC
Q 043820          235 IRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       235 ~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      .+....| +..|.+.- +|.+++..
T Consensus       573 ~d~qF~Y-IalELC~~-sL~dlie~  595 (903)
T KOG1027|consen  573 QDRQFLY-IALELCAC-SLQDLIES  595 (903)
T ss_pred             cCCceEE-EEehHhhh-hHHHHHhc
Confidence            6666777 99999874 88888865

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=97.08  E-value=0.00073  Score=65.16  Aligned_cols=84  Identities=13%  Similarity=0.065  Sum_probs=57.4

Q ss_pred             CccccceecccCccceeccccccccccccceeecCC-CcEEEEEEccCCCCc----------------------------
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARID-ARVVAARIVFAGSVT----------------------------  207 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~-~~~vAvK~l~~~~~~----------------------------  207 (282)
                      .|+. +.||+|++|+||+             +.+.+ |..||||.++.....                            
T Consensus       121 ~fd~-~PlasaSiaQVh~-------------A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~  186 (537)
T PRK04750        121 DFDI-KPLASASIAQVHF-------------ARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKP  186 (537)
T ss_pred             hcCh-hhhcCCCccEEEE-------------EEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCH
Confidence            4555 6899999999999             98887 999999998754110                            


Q ss_pred             ------h-----hH--HHHHHHHhhhCC----CCccceeccceEee-CCeEEEEEEecCCCCCcccc
Q 043820          208 ------G-----IF--FARSVTEVAKIY----ARSRPRSYPSVVIR-PGYKVGLILELKPDPDPNPD  256 (282)
Q Consensus       208 ------~-----~~--f~~e~~~l~~l~----H~nlv~l~~g~~~~-~~~~~~lv~Ey~~~GsL~~~  256 (282)
                            -     .+  |.+|+.-+.++.    +.+.+.+. .+..+ ....+ |||||++|+.|.++
T Consensus       187 ~~~v~e~~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP-~v~~d~st~~V-LvmE~i~G~~l~d~  251 (537)
T PRK04750        187 REVVAEFEKTLHDELDLMREAANASQLRRNFEDSDMLYVP-EVYWDYCSETV-MVMERMYGIPVSDV  251 (537)
T ss_pred             HHHHHHHHHHHHHhhCHHHHHHHHHHHHHHccCCCCeecc-eeecccCCCce-EEEeeecCccHHhH
Confidence                  0     11  555655544442    44555544 44433 44567 99999999999764

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=96.94  E-value=0.0017  Score=55.87  Aligned_cols=92  Identities=17%  Similarity=0.254  Sum_probs=65.6

Q ss_pred             HHHHHHhccCccccceecccCccceeccccccccccccceee-cCCCcEEEEEEccCCCCchhHHHHHHHHhhhCCC-Cc
Q 043820          148 LATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGA-RIDARVVAARIVFAGSVTGIFFARSVTEVAKIYA-RS  225 (282)
Q Consensus       148 ~~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~-~~~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H-~n  225 (282)
                      ..++..+ +.|...++||.|+||.+|.             |. +.+|.+||+|.=+..... ..+.-|..+...++| ..
T Consensus         8 ~~~~iv~-gky~lvrkiGsGSFGdIy~-------------~~~i~~ge~VAiK~Es~~a~h-pqL~yEskvY~iL~~g~G   72 (341)
T KOG1163|consen    8 LEELIVG-GKYKLVRKIGSGSFGDIYL-------------GISITSGEEVAIKLESSKAKH-PQLLYESKVYRILQGGVG   72 (341)
T ss_pred             hhhheec-cceEEEEeecCCchhheee-------------eeeccCCceEEEEeecccCCC-cchhHHHHHHHHhccCCC
Confidence            3444433 4578889999999999999             65 457999999975432211 117888888888876 56


Q ss_pred             cceeccceEeeCCeEEEEEEecCCCCCccccc
Q 043820          226 RPRSYPSVVIRPGYKVGLILELKPDPDPNPDR  257 (282)
Q Consensus       226 lv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l  257 (282)
                      |..+. -+..+..... ||||++ +.||++..
T Consensus        73 iP~i~-~y~~e~~ynv-lVMdLL-GPsLEdLf  101 (341)
T KOG1163|consen   73 IPHIR-HYGTEKDYNV-LVMDLL-GPSLEDLF  101 (341)
T ss_pred             Cchhh-hhccccccce-eeeecc-CccHHHHH
Confidence            66666 6667777888 999976 45776654

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=96.94  E-value=0.0029  Score=54.76  Aligned_cols=85  Identities=22%  Similarity=0.309  Sum_probs=67.6

Q ss_pred             ccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCch---hH-HHHHHHHhhhCCCC-ccceeccc
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTG---IF-FARSVTEVAKIYAR-SRPRSYPS  232 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~---~~-f~~e~~~l~~l~H~-nlv~l~~g  232 (282)
                      |.....||.|+||.||+             +...  ..+++|.+.......   .. |.+|+.++..+.|+ +++++. .
T Consensus         2 ~~~~~~l~~g~~~~v~~-------------~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~-~   65 (384)
T COG0515           2 YRILRKLGEGSFGEVYL-------------ARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLY-D   65 (384)
T ss_pred             ceeEEeecCCCCeEEEE-------------EEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEE-E
Confidence            34557899999999999             6654  788999887644333   34 99999999999988 799999 8


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ........+ +++||+.+++|.+++..
T Consensus        66 ~~~~~~~~~-~~~~~~~~~~l~~~~~~   91 (384)
T COG0515          66 FFQDEGSLY-LVMEYVDGGSLEDLLKK   91 (384)
T ss_pred             EEecCCEEE-EEEecCCCCcHHHHHHh
Confidence            875555557 99999999999966643

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=96.60  E-value=0.0011  Score=63.66  Aligned_cols=89  Identities=16%  Similarity=0.111  Sum_probs=69.0

Q ss_pred             ccCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCchhHHHHHHHHhhhC-CCCccceeccc
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVTGIFFARSVTEVAKI-YARSRPRSYPS  232 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l-~H~nlv~l~~g  232 (282)
                      +..+.....+|.|+|+.|-.             +.. +.++..++|++.....+   -.+|+.++... +|+|++++. +
T Consensus       321 ~~~y~~~~~~~~gs~s~~~~-------------~~~~~t~~~~~vkii~~~~~~---~~~e~~~~~~~~~h~niv~~~-~  383 (612)
T KOG0603|consen  321 TESYEFREELGEGSFSAVKY-------------CESSPTDQEPAVKIISKRADD---NQDEIPISLLVRDHPNIVKSH-D  383 (612)
T ss_pred             chhhccccccCCCCccceee-------------eeccccccchhheeccccccc---cccccchhhhhcCCCcceeec-c
Confidence            45566667899999999988             554 35788999999754211   44566554444 899999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCCC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      .+.++.+.+ +|||++.+|.|.+.|+...
T Consensus       384 v~~~~~~~~-~v~e~l~g~ell~ri~~~~  411 (612)
T KOG0603|consen  384 VYEDGKEIY-LVMELLDGGELLRRIRSKP  411 (612)
T ss_pred             eecCCceee-eeehhccccHHHHHHHhcc
Confidence            999999999 9999999999988776543

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=96.59  E-value=0.0049  Score=51.72  Aligned_cols=81  Identities=14%  Similarity=0.113  Sum_probs=59.9

Q ss_pred             ceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCC--ccceeccceEeeC
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVT-GIF-FARSVTEVAKIYAR--SRPRSYPSVVIRP  237 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~--nlv~l~~g~~~~~  237 (282)
                      +.++.|..+.+|+             ....+|..+++|........ ... +..|+.++..+.+.  ++.+++ ......
T Consensus         4 ~~l~~G~~n~~~~-------------v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~-~~~~~~   69 (223)
T cd05154           4 RQLSGGQSNLTYL-------------LTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVL-ALCEDP   69 (223)
T ss_pred             eecCCCccceEEE-------------EEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEE-EECCCC
Confidence            5689999999999             76656678999987643321 233 89999999998763  456677 665443


Q ss_pred             C---eEEEEEEecCCCCCccccc
Q 043820          238 G---YKVGLILELKPDPDPNPDR  257 (282)
Q Consensus       238 ~---~~~~lv~Ey~~~GsL~~~l  257 (282)
                      .   ..+ +||||++++++.+.+
T Consensus        70 ~~~~~~~-~v~e~i~G~~l~~~~   91 (223)
T cd05154          70 SVLGTPF-YVMERVDGRVLRDRL   91 (223)
T ss_pred             CccCCce-EEEEEeCCEecCCCC
Confidence            2   446 999999999998765

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=96.52  E-value=0.0015  Score=66.51  Aligned_cols=100  Identities=17%  Similarity=0.193  Sum_probs=65.0

Q ss_pred             HHHHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhHHHHHHHHhhhCC---CCcc
Q 043820          150 TIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIFFARSVTEVAKIY---ARSR  226 (282)
Q Consensus       150 el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~---H~nl  226 (282)
                      +++.....|.+...+|+|+||+||+             |.-.+|..||+|.-....  ..+|---.+++.+|.   -+-+
T Consensus       692 ~~~~~~~~~~I~~e~G~g~y~~vy~-------------a~~~~~~~~alK~e~P~~--~WEfYI~~q~~~RLk~~~~~~~  756 (974)
T KOG1166|consen  692 EFEVGGEKFCISKEIGEGSYGSVYV-------------ATHSNGKLVALKVEKPPN--PWEFYICLQVMERLKPQMLPSI  756 (974)
T ss_pred             eeeecceeEEEEeeeccccceEEEE-------------eecCCCcEEEEEeecCCC--ceeeeehHHHHHhhchhhhcch
Confidence            3344445678889999999999999             887779999999865432  222222223334444   1122


Q ss_pred             ceeccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCC
Q 043820          227 PRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYP  269 (282)
Q Consensus       227 v~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~  269 (282)
                      ..+. ....-.+.-+ ||+||.+.|+|.+++...+   .++|.
T Consensus       757 ~~~~-~a~~~~~~S~-lv~ey~~~Gtlld~~N~~~---~m~e~  794 (974)
T KOG1166|consen  757 MHIS-SAHVFQNASV-LVSEYSPYGTLLDLINTNK---VMDEY  794 (974)
T ss_pred             HHHH-HHHccCCcce-eeeeccccccHHHhhccCC---CCCch
Confidence            3333 3334456667 9999999999999997433   45664

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=96.34  E-value=0.0073  Score=54.55  Aligned_cols=85  Identities=18%  Similarity=0.291  Sum_probs=59.9

Q ss_pred             CccccceecccCccceeccccccccccccceeecCC--CcEEEEEEccCCCCchhH-HHHHHHHhhhCCC----Ccccee
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARID--ARVVAARIVFAGSVTGIF-FARSVTEVAKIYA----RSRPRS  229 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~--~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H----~nlv~l  229 (282)
                      .|....+||+|+||.||.             +....  ...+|+|........... +..|..++..+.+    +++.++
T Consensus        19 ~~~i~~~iG~G~fG~V~~-------------v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~   85 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYL-------------VSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKL   85 (322)
T ss_pred             ceEEeeeccccCCceEEE-------------EEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEE
Confidence            688889999999999999             76443  247888877654333333 7788888887763    466677


Q ss_pred             ccceE-eeCCeEEEEEEecCCCCCccccc
Q 043820          230 YPSVV-IRPGYKVGLILELKPDPDPNPDR  257 (282)
Q Consensus       230 ~~g~~-~~~~~~~~lv~Ey~~~GsL~~~l  257 (282)
                      + ..- ......+ +||+.+ +.+|.++.
T Consensus        86 ~-~~G~~~~~~~~-iVM~l~-G~sL~dl~  111 (322)
T KOG1164|consen   86 L-DHGRSTEDFNF-IVMSLL-GPSLEDLR  111 (322)
T ss_pred             E-EeccCCCceeE-EEEecc-CccHHHHH
Confidence            6 555 3555667 998865 45787765

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=96.33  E-value=0.0025  Score=53.56  Aligned_cols=90  Identities=16%  Similarity=0.179  Sum_probs=66.0

Q ss_pred             HHHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchh-H-HHHHHHH-hhhCCCCccc
Q 043820          151 IANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGI-F-FARSVTE-VAKIYARSRP  227 (282)
Q Consensus       151 l~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~-~-f~~e~~~-l~~l~H~nlv  227 (282)
                      ++.+.+++.....||+|++|.|-+.            -...+|+..|+|++...-...+ + .++|+.+ ++....|.+|
T Consensus        41 ~eV~ad~L~~i~elGrGayG~vekm------------rh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V  108 (282)
T KOG0984|consen   41 FEVPADDLVGIEELGRGAYGVVEKM------------RHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTV  108 (282)
T ss_pred             cccchhhhhhhhhhcCCccchhhhe------------eeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEE
Confidence            3444445555678999999998872            2235789999999976543333 3 8888876 5556899999


Q ss_pred             eeccceEeeCCeEEEEEEecCCCCCccc
Q 043820          228 RSYPSVVIRPGYKVGLILELKPDPDPNP  255 (282)
Q Consensus       228 ~l~~g~~~~~~~~~~lv~Ey~~~GsL~~  255 (282)
                      +++ |........+ +.||.|.- ||+.
T Consensus       109 ~Fy-Ga~~regdvw-IcME~M~t-Sldk  133 (282)
T KOG0984|consen  109 HFY-GALFREGDVW-ICMELMDT-SLDK  133 (282)
T ss_pred             Eee-hhhhccccEE-EeHHHhhh-hHHH
Confidence            999 9888888888 99998863 4443

>cd05151 ChoK Choline Kinase (ChoK)

Probab=96.33  E-value=0.0094  Score=47.95  Aligned_cols=75  Identities=16%  Similarity=0.083  Sum_probs=53.4

Q ss_pred             ceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccc-eeccceEeeCCe
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRP-RSYPSVVIRPGY  239 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv-~l~~g~~~~~~~  239 (282)
                      +.++.|.++.||+             .... +..+++|....... ... +..|+..+..+.+.+++ +++ +..  ...
T Consensus         4 ~~l~~G~~~~vy~-------------~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~-~~~--~~~   65 (170)
T cd05151           4 SPLKGGMTNKNYR-------------VEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLY-YFD--PET   65 (170)
T ss_pred             eecCCcccCceEE-------------EEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceE-EEe--CCC
Confidence            5688899999999             6653 67899998754322 123 78899888888665544 455 432  333


Q ss_pred             EEEEEEecCCCCCccc
Q 043820          240 KVGLILELKPDPDPNP  255 (282)
Q Consensus       240 ~~~lv~Ey~~~GsL~~  255 (282)
                      .+ +||||+++.++..
T Consensus        66 ~~-lv~e~i~G~~l~~   80 (170)
T cd05151          66 GV-LITEFIEGSELLT   80 (170)
T ss_pred             Ce-EEEEecCCCcccc
Confidence            46 9999999998875

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=96.31  E-value=0.0092  Score=51.67  Aligned_cols=82  Identities=13%  Similarity=0.026  Sum_probs=57.2

Q ss_pred             ceec-ccCccceeccccccccccccceeecCCCcEEEEEEccCCC-------------CchhH-HHHHHHHhhhCCCCcc
Q 043820          162 NKLG-EGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGS-------------VTGIF-FARSVTEVAKIYARSR  226 (282)
Q Consensus       162 ~~lG-~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~-------------~~~~~-f~~e~~~l~~l~H~nl  226 (282)
                      ..|| .|+.|+||.             .... +..+++|......             ..... +.+|+.++..++|+++
T Consensus        37 ~~lg~~~g~gtv~~-------------v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi  102 (239)
T PRK01723         37 RVVGSAKGRGTTWF-------------VQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGL  102 (239)
T ss_pred             ceeecCCCCccEEE-------------EEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCC
Confidence            6788 899999998             6553 5678888764311             01123 8889999999998875


Q ss_pred             --ceeccceEeeCCe----EEEEEEecCCC-CCccccccC
Q 043820          227 --PRSYPSVVIRPGY----KVGLILELKPD-PDPNPDRLH  259 (282)
Q Consensus       227 --v~l~~g~~~~~~~----~~~lv~Ey~~~-GsL~~~l~~  259 (282)
                        ++.+ +.......    .+ +|+||+++ .+|.+++..
T Consensus       103 ~vP~pl-~~~~~~~~~~~~~~-lV~e~l~G~~~L~~~l~~  140 (239)
T PRK01723        103 PVPRPI-AARVVRHGLFYRAD-ILIERIEGARDLVALLQE  140 (239)
T ss_pred             CCceeE-eeeeeecCcceeee-EEEEecCCCCCHHHHHhc
Confidence              6666 65443222    24 99999997 688888754

>smart00223 APPLE APPLE domain

Probab=96.25  E-value=0.008  Score=42.75  Aligned_cols=47  Identities=11%  Similarity=0.234  Sum_probs=35.4

Q ss_pred             CCCCCceee----cCCCHHHHHHHhhcCCCceeEeeccccCCCceeEEecc
Q 043820            4 PDATPSRVS----KSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFG   50 (282)
Q Consensus         4 pd~~~~~~~----~~~~~~~C~~~Cl~nCsC~a~~~~~~~~~~~~C~~~~~   50 (282)
                      +|+++.+.|    ...+.++|+++|..+=.|.+|.|.....+...|+++.+
T Consensus         7 ~~~df~G~Dl~~~~~~~~~~Cq~~Ct~~~~C~~FTf~~~~~~~~~C~LK~s   57 (79)
T smart00223        7 KNVDFRGSDINTVYVPSAQVCQKRCTSHPRCLFFTFSTNEPPEEKCLLKDS   57 (79)
T ss_pred             cCccccCceeeeeecCCHHHHHHhhcCCCCccEEEeeCCCCCCCEeEeCcC
Confidence            455665444    67899999999999999999999753333338998754

Four-fold repeat in plasma kallikrein and coagulation factor XI. Factor XI apple 3 mediates binding to platelets. Factor XI apple 1 binds high-molecular-mass kininogen. Apple 4 in factor XI mediates dimer formation and binds to factor XIIa. Mutations in apple 4 cause factor XI deficiency, an inherited bleeding disorder.

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=96.19  E-value=0.0017  Score=56.77  Aligned_cols=87  Identities=13%  Similarity=0.129  Sum_probs=65.2

Q ss_pred             cccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCC--CCchhH-HHHHHHHhhhCCCCccceeccceE
Q 043820          159 SINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAG--SVTGIF-FARSVTEVAKIYARSRPRSYPSVV  234 (282)
Q Consensus       159 ~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~--~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~~  234 (282)
                      +..+.||-|+||.||.             .+.+ +|..||.|++..-  +....+ +.+|++++.-++|.|+...+ ..-
T Consensus        56 ~PDRPIGYGAFGVVWs-------------VTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaL-DIL  121 (449)
T KOG0664|consen   56 QPDRPIGYGAFGVVWS-------------VTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLL-DIL  121 (449)
T ss_pred             CCCCcccccceeEEEe-------------ccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHH-Hhc
Confidence            3448999999999998             6655 6899999988642  223344 89999999999999999988 654


Q ss_pred             eeCC-----eEEEEEEecCCCCCccccccCCC
Q 043820          235 IRPG-----YKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       235 ~~~~-----~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      ....     +.| ++.|+|.. +|++.|-+..
T Consensus       122 QPph~dfFqEiY-V~TELmQS-DLHKIIVSPQ  151 (449)
T KOG0664|consen  122 QPANPSFFQELY-VLTELMQS-DLHKIIVSPQ  151 (449)
T ss_pred             CCCCchHHHHHH-HHHHHHHh-hhhheeccCC
Confidence            4332     345 78888864 7888876543

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=96.15  E-value=0.0018  Score=56.59  Aligned_cols=74  Identities=16%  Similarity=0.126  Sum_probs=58.7

Q ss_pred             cceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchh-H-HHHHHHHhhhCC-CCccceeccceEee
Q 043820          161 NNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGI-F-FARSVTEVAKIY-ARSRPRSYPSVVIR  236 (282)
Q Consensus       161 ~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~-~-f~~e~~~l~~l~-H~nlv~l~~g~~~~  236 (282)
                      ...||.|.-|.|++             .... .|...|||.+.......+ + .+..+.++..-+ .|.||+.+ |+...
T Consensus        97 l~dlGsGtcG~V~k-------------~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~-GyFi~  162 (391)
T KOG0983|consen   97 LGDLGSGTCGQVWK-------------MRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCF-GYFIT  162 (391)
T ss_pred             HHhhcCCCccceEE-------------EEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeee-eEEee
Confidence            36799999999999             6544 578999999976543333 3 888888877664 79999999 99998


Q ss_pred             CCeEEEEEEecCC
Q 043820          237 PGYKVGLILELKP  249 (282)
Q Consensus       237 ~~~~~~lv~Ey~~  249 (282)
                      +.... +-||.|.
T Consensus       163 n~dV~-IcMelMs  174 (391)
T KOG0983|consen  163 NTDVF-ICMELMS  174 (391)
T ss_pred             CchHH-HHHHHHH
Confidence            88887 8888774

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=95.76  E-value=0.016  Score=54.45  Aligned_cols=86  Identities=14%  Similarity=0.115  Sum_probs=62.4

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCC-----CC---c
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIY-----AR---S  225 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~-----H~---n  225 (282)
                      ..|...++||-|-|++||.             +... ..+.||+|+.+. .....+ -+.|+++|++++     |+   .
T Consensus        78 gRY~v~rKLGWGHFSTVWL-------------awDtq~~r~VAlKVvKS-AqhYtEaAlDEIklL~~v~~~Dp~~~~~~~  143 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWL-------------AWDTQNKRYVALKVVKS-AQHYTEAALDEIKLLQQVREGDPNDPGKKC  143 (590)
T ss_pred             ceEEEEEeccccccceeEE-------------EeeccCCeEEEEEEEeh-hhHHHHHHHHHHHHHHHHHhcCCCCCCCce
Confidence            4566779999999999999             6533 467899999863 233344 889999998873     22   5


Q ss_pred             cceeccceEee----CCeEEEEEEecCCCCCcccccc
Q 043820          226 RPRSYPSVVIR----PGYKVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       226 lv~l~~g~~~~----~~~~~~lv~Ey~~~GsL~~~l~  258 (282)
                      ||+|+ ..+..    +.+.. +|+|++.. +|..+|.
T Consensus       144 VV~Ll-D~FkhsGpNG~HVC-MVfEvLGd-nLLklI~  177 (590)
T KOG1290|consen  144 VVQLL-DHFKHSGPNGQHVC-MVFEVLGD-NLLKLIK  177 (590)
T ss_pred             eeeee-ccceecCCCCcEEE-EEehhhhh-HHHHHHH
Confidence            89999 77654    34556 99999865 5666664

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=95.55  E-value=0.00082  Score=63.16  Aligned_cols=89  Identities=15%  Similarity=0.044  Sum_probs=68.7

Q ss_pred             ccccceecccCccceeccccccccccccceeecCC-CcEEEEEEccCCC---CchhH-HHHHHHHhhhCCCCccceeccc
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARID-ARVVAARIVFAGS---VTGIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~-~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      +.....||-|+||.|=.             ..... ...+|+|.+++..   ....+ ...|-.+|...+.+-||+|+ -
T Consensus       422 l~~iaTLGvGgFGRVEL-------------V~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLY-r  487 (732)
T KOG0614|consen  422 LKRIATLGVGGFGRVEL-------------VKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLY-R  487 (732)
T ss_pred             hhhhhhcccCccceEEE-------------EEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHH-H
Confidence            33446799999999987             44332 2347888886532   22233 88899999999999999999 7


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCCC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      ...+....| ++||-+-+|.|...|++..
T Consensus       488 Tfrd~kyvY-mLmEaClGGElWTiLrdRg  515 (732)
T KOG0614|consen  488 TFRDSKYVY-MLMEACLGGELWTILRDRG  515 (732)
T ss_pred             Hhccchhhh-hhHHhhcCchhhhhhhhcC
Confidence            778888888 9999999999999998754

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=95.16  E-value=0.021  Score=51.39  Aligned_cols=83  Identities=19%  Similarity=0.322  Sum_probs=56.9

Q ss_pred             CccccceecccCccceeccccccccccccceee-cCCCcEEEEEEccCCCCchhHHHHHHHHhhhC-CCCccceeccceE
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGA-RIDARVVAARIVFAGSVTGIFFARSVTEVAKI-YARSRPRSYPSVV  234 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~-~~~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l-~H~nlv~l~~g~~  234 (282)
                      +|..+++||+|+||..+.             |. +-++..||||.=+..+. .-.+..|-+....| .-++|..++ =+-
T Consensus        29 hyrVGkKIGeGsFG~lf~-------------G~Nl~nne~VAIKfEPrkS~-APQLrdEYr~YKlL~g~~GIP~vY-YFG   93 (449)
T KOG1165|consen   29 HYRVGKKIGEGSFGVLFL-------------GKNLYNNEPVAIKFEPRKSE-APQLRDEYRTYKLLGGTEGIPQVY-YFG   93 (449)
T ss_pred             cceeccccccCcceeeec-------------ccccccCceEEEEeccccCC-cchHHHHHHHHHHHcCCCCCCcee-eec
Confidence            577889999999999999             75 45789999997543211 11166677666666 446777765 333


Q ss_pred             eeCCeEEEEEEecCCCCCcccc
Q 043820          235 IRPGYKVGLILELKPDPDPNPD  256 (282)
Q Consensus       235 ~~~~~~~~lv~Ey~~~GsL~~~  256 (282)
                      .++.... ||+|++ +.||++.
T Consensus        94 qeG~~Ni-LVidLL-GPSLEDL  113 (449)
T KOG1165|consen   94 QEGKYNI-LVIDLL-GPSLEDL  113 (449)
T ss_pred             cccchhh-hhhhhh-CcCHHHH
Confidence            4466667 899876 4577664

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=95.02  E-value=0.011  Score=53.71  Aligned_cols=90  Identities=19%  Similarity=0.105  Sum_probs=63.0

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhHHHHHHHHhhhCC-CC-c----cc
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIFFARSVTEVAKIY-AR-S----RP  227 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~-H~-n----lv  227 (282)
                      ++.|.....+|+|.||.|.+             .... .+..||+|+++.-..-.+.-+-|+.++.++. +. +    .|
T Consensus        88 ~~Ry~i~~~lGeGtFGkV~e-------------c~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv  154 (415)
T KOG0671|consen   88 TNRYEIVDLLGEGTFGKVVE-------------CWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCV  154 (415)
T ss_pred             ccceehhhhhcCCcccceEE-------------EeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEE
Confidence            55677779999999999999             5433 3689999999753332222778899999983 32 2    45


Q ss_pred             eeccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          228 RSYPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       228 ~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      .+. ++..-.+... +|+|.|. -|+.++|...
T Consensus       155 ~m~-~wFdyrghiC-ivfellG-~S~~dFlk~N  184 (415)
T KOG0671|consen  155 QMR-DWFDYRGHIC-IVFELLG-LSTFDFLKEN  184 (415)
T ss_pred             eee-hhhhccCceE-EEEeccC-hhHHHHhccC
Confidence            555 5555566666 9999774 3788888653

>PF14295 PAN_4: PAN domain; PDB: 2YIL_E 2YIP_C 2YIO_A

Probab=94.81  E-value=0.026  Score=35.97  Aligned_cols=46  Identities=15%  Similarity=0.364  Sum_probs=18.0

Q ss_pred             CCCCCCcee-ecCCCHHHHHHHhhcCCCceeEeeccc--cCCCceeEEe
Q 043820            3 LPDATPSRV-SKSINLNECREKCLENSSCMVYTNLDI--RGGGSGCAMW   48 (282)
Q Consensus         3 lpd~~~~~~-~~~~~~~~C~~~Cl~nCsC~a~~~~~~--~~~~~~C~~~   48 (282)
                      +|..++..+ -...+.++|.+.|..+=.|.+|.|...  ..+...|+++
T Consensus         3 ~~G~dl~~~~~~~~s~~~C~~~C~~~~~C~~~~~~~~~~~~~~~~C~LK   51 (51)
T PF14295_consen    3 YPGGDLRSFPVTASSPEECQAACAADPGCQAFTFNPPGCPSSSGRCYLK   51 (51)
T ss_dssp             ---------------HHHHHHHHHTSTT--EEEEETTEE----------
T ss_pred             ccccccccccccCCCHHHHHHHccCCCCCCEEEEECCCcccccccccCC
Confidence            344454443 256789999999999999999999641  1234567653

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=94.69  E-value=0.012  Score=55.97  Aligned_cols=51  Identities=8%  Similarity=-0.078  Sum_probs=44.2

Q ss_pred             hhhCCCCccceeccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          218 VAKIYARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       218 l~~l~H~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      |..+.|.|+.++. |.+..++..+ +|.+|++.|+|.+.|....  ..+||..++
T Consensus         1 l~~l~h~n~~~f~-g~~~~~~~~~-~i~~~c~rGsl~D~i~~~~--~~~d~~F~~   51 (484)
T KOG1023|consen    1 LRQLDHDNLNKFI-GASVDGPEMI-VIWEYCSRGSLLDILSNED--IKLDYFFIL   51 (484)
T ss_pred             Ccccchhhhhhhe-eeEecCCceE-EEEeeecCccHHhHHhccc--cCccHHHHH
Confidence            4578999999999 9999998888 9999999999999998744  468888664

>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]

Probab=93.54  E-value=0.061  Score=32.71  Aligned_cols=29  Identities=17%  Similarity=0.291  Sum_probs=15.3

Q ss_pred             CCCceEEEEehhHHHHHHHH---HHHHHHhhc
Q 043820           98 GKPTTKIVVIVVPTAALLAA---LILSNISEK  126 (282)
Q Consensus        98 ~~~~~iii~i~~~~~~~~~l---~~~~~rr~~  126 (282)
                      .+...+.+++++++++++++   ++++|+||+
T Consensus         8 ~~~vaIa~~VvVPV~vI~~vl~~~l~~~~rR~   39 (40)
T PF08693_consen    8 SNTVAIAVGVVVPVGVIIIVLGAFLFFWYRRK   39 (40)
T ss_pred             CceEEEEEEEEechHHHHHHHHHHhheEEecc
Confidence            33455666666666555443   334455554

This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].

>PF00024 PAN_1: PAN domain This Prosite entry concerns apple domains, a subset of PAN domains; InterPro: IPR003014 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions []

Probab=92.91  E-value=0.16  Score=35.17  Aligned_cols=38  Identities=18%  Similarity=0.423  Sum_probs=31.1

Q ss_pred             cCCCHHHHHHHhhcCCC-ceeEeeccccCCCceeEEeccccc
Q 043820           13 KSINLNECREKCLENSS-CMVYTNLDIRGGGSGCAMWFGELI   53 (282)
Q Consensus        13 ~~~~~~~C~~~Cl~nCs-C~a~~~~~~~~~~~~C~~~~~~l~   53 (282)
                      ...++++|.+.|+.+-. |.+|.|..   ....|.+....-.
T Consensus        21 ~v~s~~~C~~~C~~~~~~C~s~~y~~---~~~~C~L~~~~~~   59 (79)
T PF00024_consen   21 NVPSLEECAQLCLNEPRRCKSFNYDP---SSKTCYLSSSDRS   59 (79)
T ss_dssp             EESSHHHHHHHHHHSTT-ESEEEEET---TTTEEEEECSSSS
T ss_pred             cCCCHHHHHhhcCcCcccCCeEEEEC---CCCEEEEcCCCCC
Confidence            45599999999999999 99999975   3578999765433

These domains contain a hair-pin loop like structure, similar to knottins, but the pattern of disulphide bonds differs It has been shown that, the N-terminal N domains of members of the plasminogen/hepatocyte growth factor family, the apple domains of the plasma prekallikrein/coagulation factor XI family, and domains of various nematode proteins belong to the same module superfamily, the PAN module []. PAN contains a conserved core of three disulphide bridges. In some members of the family there is an additional fourth disulphide bridge that links the N and C termini of the domain.; PDB: 1GP9_C 2QJ2_B 1GMO_H 1NK1_B 3MKP_B 1BHT_B 3HN4_A 1GMN_A 3HMS_A 3HMT_B ....

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=92.90  E-value=0.21  Score=48.17  Aligned_cols=81  Identities=11%  Similarity=0.062  Sum_probs=57.9

Q ss_pred             ceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCch---------------------------------
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTG---------------------------------  208 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~---------------------------------  208 (282)
                      +.++.++-|+||+             +.+.+|+.||||....+-...                                 
T Consensus       131 ~PiAsASIaQVH~-------------A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e  197 (517)
T COG0661         131 EPIASASIAQVHR-------------AVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDE  197 (517)
T ss_pred             CchhhhhHhhhee-------------EEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHH
Confidence            6789999999999             999999999999987652111                                 


Q ss_pred             ------hH--HHHHHHHhhhC----CCCccceeccceEee-CCeEEEEEEecCCCCCccccc
Q 043820          209 ------IF--FARSVTEVAKI----YARSRPRSYPSVVIR-PGYKVGLILELKPDPDPNPDR  257 (282)
Q Consensus       209 ------~~--f~~e~~~l~~l----~H~nlv~l~~g~~~~-~~~~~~lv~Ey~~~GsL~~~l  257 (282)
                            .+  |.+|+.-+.++    ++..-+++. .++++ ..... |+|||++|-.+.+..
T Consensus       198 ~~~~l~~ElDy~~EA~n~~~~~~nf~~~~~v~VP-~V~we~t~~~V-LtmE~i~Gi~i~d~~  257 (517)
T COG0661         198 FEKRLREELDYRREAANAERFRENFKDDPDVYVP-KVYWEYTTRRV-LTMEWIDGIKISDIA  257 (517)
T ss_pred             HHHHHHHHhCHHHHHHHHHHHHHHcCCCCCeEec-eeehhccCCcE-EEEEeeCCEecccHH
Confidence                  11  44555444433    344455665 66654 56667 999999999888874

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=92.55  E-value=0.085  Score=50.20  Aligned_cols=85  Identities=14%  Similarity=0.105  Sum_probs=60.7

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhHHHHHHHHhhhCCC------Cccceec
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIFFARSVTEVAKIYA------RSRPRSY  230 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H------~nlv~l~  230 (282)
                      |...-..|+|-|++|..             +.-. .|++||||+|.........=+.|+++|.+|+.      .+.++|+
T Consensus       434 Y~V~~~~GkGvFs~Vvr-------------a~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~  500 (752)
T KOG0670|consen  434 YEVQGYTGKGVFSTVVR-------------ARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLF  500 (752)
T ss_pred             eEEEeccccceeeeeee-------------ccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHH
Confidence            44445678999999999             6543 47899999997543222225688999998853      3678888


Q ss_pred             cceEeeCCeEEEEEEecCCCCCcccccc
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~  258 (282)
                       -.+...+++. ||+|-+.- +|.++|.
T Consensus       501 -r~F~hknHLC-lVFE~Lsl-NLRevLK  525 (752)
T KOG0670|consen  501 -RHFKHKNHLC-LVFEPLSL-NLREVLK  525 (752)
T ss_pred             -HHhhhcceeE-EEehhhhc-hHHHHHH
Confidence             7777788888 99997653 5666654

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=92.40  E-value=0.27  Score=47.49  Aligned_cols=101  Identities=14%  Similarity=0.084  Sum_probs=64.0

Q ss_pred             CCCCccCHHHHHHhc------------cCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCch
Q 043820          141 LELPLFELATIANAT------------DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTG  208 (282)
Q Consensus       141 ~~~~~~~~~el~~at------------~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~  208 (282)
                      ...|.++++|+..--            ..|+ ...||.-+.|+||+             +.+++|..||||.-+.+-...
T Consensus       135 D~~Pp~~~ee~~~i~e~ElG~~ie~if~~f~-~~piaaASlaQVhr-------------A~L~~G~~VaVKVQ~P~l~~~  200 (538)
T KOG1235|consen  135 DQAPPFPWEEAFKIFEEELGAPIEDIFSEFD-EEPIAAASLAQVHR-------------ARLKNGEDVAVKVQHPGLEKL  200 (538)
T ss_pred             ccCCCCCHHHHHHHHHHHhCCCHHHHHHhcC-cchhhhcchhheEE-------------EEecCCCEEEEEecCcChHHH
Confidence            446677777664322            2233 26789999999999             999999999999887542211


Q ss_pred             ------------------------------------hH--HHHHHHH----hhhCCCCc---cceeccceEee-CCeEEE
Q 043820          209 ------------------------------------IF--FARSVTE----VAKIYARS---RPRSYPSVVIR-PGYKVG  242 (282)
Q Consensus       209 ------------------------------------~~--f~~e~~~----l~~l~H~n---lv~l~~g~~~~-~~~~~~  242 (282)
                                                          .+  |..|++=    -..+.|-+   =|++. .+.++ ...+. 
T Consensus       201 ~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~Nae~~~~~f~~~~~~~~V~VP-~Vy~~~st~RV-  278 (538)
T KOG1235|consen  201 IMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAKNAERFRENFKDFSLLTYVLVP-KVYWDLSTKRV-  278 (538)
T ss_pred             HHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHHhHHHHHHHHHhcccccceeCC-eehhhcCcceE-
Confidence                                                11  4445532    23345555   12233 33333 45677 


Q ss_pred             EEEecCCCCCccccc
Q 043820          243 LILELKPDPDPNPDR  257 (282)
Q Consensus       243 lv~Ey~~~GsL~~~l  257 (282)
                      |+||||+|.-+.+.-
T Consensus       279 LtME~~~G~~i~Dl~  293 (538)
T KOG1235|consen  279 LTMEYVDGIKINDLD  293 (538)
T ss_pred             EEEEecCCccCCCHH
Confidence            999999999888763

>KOG4258 consensus Insulin/growth factor receptor (contains protein kinase domain) [Signal transduction mechanisms]

Probab=91.33  E-value=0.095  Score=52.23  Aligned_cols=28  Identities=25%  Similarity=0.598  Sum_probs=25.0

Q ss_pred             cCHHHHHHhccCccccceecccCccceec
Q 043820          146 FELATIANATDNFSINNKLGEGGFGPVYK  174 (282)
Q Consensus       146 ~~~~el~~at~~f~~~~~lG~G~fG~Vy~  174 (282)
                      +--+||+.+.+ ....+.+|+|+||+||.
T Consensus       985 yv~deWe~~r~-it~~relg~gsfg~Vy~ 1012 (1025)
T KOG4258|consen  985 YVPDEWEVSRE-ITLGRELGQGSFGMVYE 1012 (1025)
T ss_pred             CChhHHHHHHH-HhhhhhhccCccceEEE
Confidence            66688988887 88889999999999999

>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls

Probab=90.67  E-value=0.15  Score=39.77  Aligned_cols=16  Identities=13%  Similarity=0.154  Sum_probs=7.2

Q ss_pred             eEEEEehhHHHHHHHH
Q 043820          102 TKIVVIVVPTAALLAA  117 (282)
Q Consensus       102 ~iii~i~~~~~~~~~l  117 (282)
                      |++++++|++++++++
T Consensus         2 W~l~~iii~~i~l~~~   17 (130)
T PF12273_consen    2 WVLFAIIIVAILLFLF   17 (130)
T ss_pred             eeeHHHHHHHHHHHHH
Confidence            4444444444444444

Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=89.80  E-value=0.55  Score=38.93  Aligned_cols=76  Identities=14%  Similarity=0.139  Sum_probs=51.9

Q ss_pred             cceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccce-eccceEeeCC
Q 043820          161 NNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPR-SYPSVVIRPG  238 (282)
Q Consensus       161 ~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~-l~~g~~~~~~  238 (282)
                      ...|++|.+|.||.             |.+ .|..+|+|.-...+  ... +..|++++..+.--++-. ++    . -+
T Consensus        27 ~~~L~KG~~s~Vyl-------------~~~-~~~~~a~Kvrr~ds--~r~~l~kEakiLeil~g~~~~p~vy----~-yg   85 (201)
T COG2112          27 EKELAKGTTSVVYL-------------GEW-RGGEVALKVRRRDS--PRRNLEKEAKILEILAGEGVTPEVY----F-YG   85 (201)
T ss_pred             hhhhhcccccEEEE-------------eec-cCceEEEEEecCCc--chhhHHHHHHHHHHhhhcCCCceEE----E-ec
Confidence            37899999999999             776 45688888764322  233 999999988876544432 22    1 22


Q ss_pred             eEEEEEEecCCCCCcccccc
Q 043820          239 YKVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       239 ~~~~lv~Ey~~~GsL~~~l~  258 (282)
                      +.. +.|||+.+-.|.+.-.
T Consensus        86 ~~~-i~me~i~G~~L~~~~~  104 (201)
T COG2112          86 EDF-IRMEYIDGRPLGKLEI  104 (201)
T ss_pred             hhh-hhhhhhcCcchhhhhh
Confidence            333 6799999988776543

>PRK10593 hypothetical protein; Provisional

Probab=89.66  E-value=1.1  Score=40.06  Aligned_cols=78  Identities=12%  Similarity=0.075  Sum_probs=54.1

Q ss_pred             ccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCC---CccceeccceEe
Q 043820          160 INNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF-FARSVTEVAKIYA---RSRPRSYPSVVI  235 (282)
Q Consensus       160 ~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H---~nlv~l~~g~~~  235 (282)
                      ....||.|..+.||.             -...++ .+.+|..+.  ..... |..|...|..+.-   ..+.+++ +.|.
T Consensus        18 ~~~~i~~G~~~~vy~-------------~~~~~~-~~~~k~~~~--~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~-~~~~   80 (297)
T PRK10593         18 RVECISEQPYAALWA-------------LYDSQG-NPMPLMARS--FSTPGVAQQEAWKLSMLARSGTVRMPTVY-GVMT   80 (297)
T ss_pred             eeeecCCccceeEEE-------------EEcCCC-CEEEEEecc--cccchHHHHHHHHHHHHccCCCCCcCcEE-EEec
Confidence            336799999999999             554444 455666322  11223 9999999988843   3577888 7775


Q ss_pred             eC---CeEEEEEEecCCCCCccc
Q 043820          236 RP---GYKVGLILELKPDPDPNP  255 (282)
Q Consensus       236 ~~---~~~~~lv~Ey~~~GsL~~  255 (282)
                      .+   +..+ ||||+++++++.+
T Consensus        81 ~~~~~g~~~-LVmE~i~G~~~~~  102 (297)
T PRK10593         81 HEQSPGPDV-LLLERLRGVSVEA  102 (297)
T ss_pred             cCCcCCCeE-EEEeccCCEecCC
Confidence            43   4567 9999999987754

>cd01099 PAN_AP_HGF Subfamily of PAN/APPLE-like domains; present in N-terminal (N) domains of plasminogen/hepatocyte growth factor proteins, and various proteins found in Bilateria, such as leech anti-platelet proteins

Probab=89.52  E-value=0.88  Score=32.15  Aligned_cols=36  Identities=25%  Similarity=0.468  Sum_probs=29.1

Q ss_pred             CCCHHHHHHHhhc--CCCceeEeeccccCCCceeEEecccc
Q 043820           14 SINLNECREKCLE--NSSCMVYTNLDIRGGGSGCAMWFGEL   52 (282)
Q Consensus        14 ~~~~~~C~~~Cl~--nCsC~a~~~~~~~~~~~~C~~~~~~l   52 (282)
                      ..++++|...|+.  +=.|.+|.|..   ....|.+...+.
T Consensus        24 ~~s~~~C~~~C~~~~~f~CrSf~y~~---~~~~C~L~~~~~   61 (80)
T cd01099          24 VASLEECLRKCLEETEFTCRSFNYNY---KSKECILSDEDR   61 (80)
T ss_pred             cCCHHHHHHHhCCCCCceEeEEEEEc---CCCEEEEeCCCc
Confidence            5799999999999  88899999974   257898855443

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=89.30  E-value=0.12  Score=39.68  Aligned_cols=30  Identities=20%  Similarity=0.272  Sum_probs=27.4

Q ss_pred             ceecccCccceeccccccccccccceeecCCCcEEEEEEccCC
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAG  204 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~  204 (282)
                      +.||.|+.|+||+             |.+.+|..||||.....
T Consensus        17 ~PlasASiaQVh~-------------a~l~~g~~VaVKV~rP~   46 (119)
T PF03109_consen   17 EPLASASIAQVHR-------------ARLKDGEEVAVKVQRPG   46 (119)
T ss_pred             chhhheehhhhee-------------eeecccchhhhhhcchH
Confidence            7899999999999             99999999999998654

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane

Probab=88.98  E-value=0.093  Score=40.40  Aligned_cols=25  Identities=4%  Similarity=0.053  Sum_probs=9.7

Q ss_pred             EEEehhHHHHHHHHHHHHHHhhccc
Q 043820          104 IVVIVVPTAALLAALILSNISEKTE  128 (282)
Q Consensus       104 ii~i~~~~~~~~~l~~~~~rr~~~~  128 (282)
                      |+|++.++++++++++|+.||++++
T Consensus        70 i~gv~aGvIg~Illi~y~irR~~Kk   94 (122)
T PF01102_consen   70 IFGVMAGVIGIILLISYCIRRLRKK   94 (122)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            3344444444444444444444443

Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.

>PLN02876 acyl-CoA dehydrogenase

Probab=88.84  E-value=1.3  Score=45.40  Aligned_cols=78  Identities=14%  Similarity=0.173  Sum_probs=53.7

Q ss_pred             ceecccCccceeccccccccccccceeecCCC---cEEEEEEccCCCC-chhH-HHHHHHHhhhCC-CCcc--ceeccce
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARIDA---RVVAARIVFAGSV-TGIF-FARSVTEVAKIY-ARSR--PRSYPSV  233 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~---~~vAvK~l~~~~~-~~~~-f~~e~~~l~~l~-H~nl--v~l~~g~  233 (282)
                      ..++.|.+..+|.             -....+   ..+++|+.+.... .... +.+|..+|..+. |.++  .+++ +.
T Consensus        44 ~~l~gG~sn~ty~-------------l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~-~~  109 (822)
T PLN02876         44 SQFGHGQSNPTFL-------------LEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVY-CL  109 (822)
T ss_pred             EEeCCCCcCceEE-------------EEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEE-EE
Confidence            6678888999998             444332   3567777654332 2334 899999999995 6654  7777 77


Q ss_pred             EeeC---CeEEEEEEecCCCCCcc
Q 043820          234 VIRP---GYKVGLILELKPDPDPN  254 (282)
Q Consensus       234 ~~~~---~~~~~lv~Ey~~~GsL~  254 (282)
                      |.+.   +..+ +||||+++..+.
T Consensus       110 ~~d~~v~G~~f-lVME~v~G~~~~  132 (822)
T PLN02876        110 CTDASVIGTAF-YIMEYLEGRIFV  132 (822)
T ss_pred             ecCCCcCCCce-EEEEecCCcccC
Confidence            7654   3466 999999986543

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=87.25  E-value=0.15  Score=48.29  Aligned_cols=69  Identities=20%  Similarity=0.295  Sum_probs=52.6

Q ss_pred             HhccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH--HHHHHHHhhhCCCCcccee
Q 043820          153 NATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF--FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       153 ~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~--f~~e~~~l~~l~H~nlv~l  229 (282)
                      +--++|.....+|.|+||+|+.             .... ++...|||+|.........  .++|+..+.++.|++++++
T Consensus        46 r~a~~~e~~~~~~~~g~~~~~~-------------~~n~~d~~~~avkritlkn~e~s~~rvl~~~~s~a~feh~g~~~~  112 (516)
T KOG1033|consen   46 REANDFEPGQCLGRGGFGVVFS-------------AQNKADENKYAVKRITLKNREESRSRVLREVSSLAEFEHPGIKRY  112 (516)
T ss_pred             hhhccccccccccccCccccCC-------------ccccccchhhHHHHhcccchhhhhhhhhccccchhhhcccchhhh
Confidence            3446788889999999999999             5443 5668899998754444333  8899999999999999987


Q ss_pred             ccceEe
Q 043820          230 YPSVVI  235 (282)
Q Consensus       230 ~~g~~~  235 (282)
                      . -.+.
T Consensus       113 ~-ha~~  117 (516)
T KOG1033|consen  113 F-HAWY  117 (516)
T ss_pred             e-ecee
Confidence            6 4433

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=86.42  E-value=1.3  Score=42.64  Aligned_cols=67  Identities=12%  Similarity=0.042  Sum_probs=49.1

Q ss_pred             CCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccceEee----CCeEEEEEEecCCC-CCccccccC
Q 043820          191 IDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSVVIR----PGYKVGLILELKPD-PDPNPDRLH  259 (282)
Q Consensus       191 ~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~~~~----~~~~~~lv~Ey~~~-GsL~~~l~~  259 (282)
                      .+|..+.+|+++....+... -..-++.+.++.|.|+|++. .+...    ..... +||+|.|+ ++|.++-+.
T Consensus       299 ~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~fr-evf~t~tF~D~Slv-lvYDYyP~s~TL~d~~F~  371 (655)
T KOG3741|consen  299 VDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFR-EVFLTYTFGDLSLV-LVYDYYPSSPTLYDLYFA  371 (655)
T ss_pred             cCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehh-hhhhhhccCcceEE-EEEecCCCCchHHHHHcc
Confidence            37889999999554433333 55667788999999999998 76552    33445 99999986 788776654

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=86.04  E-value=0.2  Score=48.46  Aligned_cols=88  Identities=17%  Similarity=0.127  Sum_probs=59.3

Q ss_pred             eecccCccceeccccccccccccceeecCCCcEEEEEEccCCC-CchhH--HHHHHHHhhhCC-CCccceeccceEeeCC
Q 043820          163 KLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGS-VTGIF--FARSVTEVAKIY-ARSRPRSYPSVVIRPG  238 (282)
Q Consensus       163 ~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~-~~~~~--f~~e~~~l~~l~-H~nlv~l~~g~~~~~~  238 (282)
                      .+|+|.||.|+.+.-.         +....+..+|.|.+.... ..+.+  ...|..++...+ |+.+|++.  ++...+
T Consensus         1 vlg~g~~gkvfLvrk~---------~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lh--yafqt~   69 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKA---------GGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLH--YAFQTD   69 (612)
T ss_pred             CCCcCCCcchHHHHHh---------ccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeee--eeeccc
Confidence            3689999999873211         112235667777765432 22222  666777788886 99999997  555555


Q ss_pred             eEEEEEEecCCCCCccccccCCC
Q 043820          239 YKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       239 ~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      ..++++++|..+|+|...+..+.
T Consensus        70 ~kl~l~ld~~rgg~lft~l~~~~   92 (612)
T KOG0603|consen   70 GKLYLILDFLRGGDLFTRLSKEV   92 (612)
T ss_pred             cchhHhhhhcccchhhhccccCC
Confidence            54449999999999988876543

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=84.91  E-value=3.5  Score=34.65  Aligned_cols=74  Identities=18%  Similarity=0.167  Sum_probs=53.0

Q ss_pred             ccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCC----------------CchhH-HHHHHHHhhhCC
Q 043820          160 INNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGS----------------VTGIF-FARSVTEVAKIY  222 (282)
Q Consensus       160 ~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~----------------~~~~~-f~~e~~~l~~l~  222 (282)
                      ....||+|+.-.||.               .|+.....||.+....                ....+ +.+|+.-...+.
T Consensus         5 ~~~~i~~G~~R~cy~---------------HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~   69 (199)
T PF10707_consen    5 ESDLIAQGGERDCYQ---------------HPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLS   69 (199)
T ss_pred             CCcccccCCCceEEE---------------CCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHh
Confidence            347899999999998               3445566788776544                11223 677776555554


Q ss_pred             ------CCccceeccceEeeCCeEEEEEEecCCC
Q 043820          223 ------ARSRPRSYPSVVIRPGYKVGLILELKPD  250 (282)
Q Consensus       223 ------H~nlv~l~~g~~~~~~~~~~lv~Ey~~~  250 (282)
                            +.+|.+++ |...++...- +|+|.+.+
T Consensus        70 ~~~~~~~~~i~r~~-G~veT~~G~G-lv~e~I~d  101 (199)
T PF10707_consen   70 LRRGVDWSHIPRFY-GFVETNLGLG-LVVELIRD  101 (199)
T ss_pred             hccCCcccccccEe-EEEecCCceE-EEEEEEEC
Confidence                  78899999 9998888887 99998753

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PF08277 PAN_3: PAN-like domain; InterPro: IPR006583 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions []

Probab=82.85  E-value=3.9  Score=27.77  Aligned_cols=33  Identities=15%  Similarity=0.543  Sum_probs=27.6

Q ss_pred             ecCCCHHHHHHHhhcCCCceeEeeccccCCCceeEEec
Q 043820           12 SKSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWF   49 (282)
Q Consensus        12 ~~~~~~~~C~~~Cl~nCsC~a~~~~~~~~~~~~C~~~~   49 (282)
                      ....+.++|-+.|.++-.|..+.+.+     ..|.++.
T Consensus        17 ~~~~sw~~Cv~~C~~~~~C~la~~~~-----~~C~~y~   49 (71)
T PF08277_consen   17 TTNTSWDDCVQKCYNDENCVLAYFDS-----GKCYLYN   49 (71)
T ss_pred             ccCCCHHHHhHHhCCCCEEEEEEeCC-----CCEEEEE
Confidence            36678999999999999999988763     6898854

These domains contain a hair-pin loop like structure, similar to knottins, but the pattern of disulphide bonds differs The PAN-3 or CW is a domain associated with a number of Caenorhabditis elegans hypothetical proteins.

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=82.42  E-value=4.1  Score=36.13  Aligned_cols=79  Identities=18%  Similarity=0.233  Sum_probs=53.8

Q ss_pred             cccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCch----------------------hH-HHHHH
Q 043820          159 SINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTG----------------------IF-FARSV  215 (282)
Q Consensus       159 ~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~----------------------~~-f~~e~  215 (282)
                      .+++.||.|.=+.||.             +..++|.++|+|.-+.+...-                      .. -.+|.
T Consensus        94 ~iG~~IGvGKEsdVY~-------------~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf  160 (304)
T COG0478          94 AIGTKIGVGKESDVYV-------------AIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREF  160 (304)
T ss_pred             hhccccccCccceEEE-------------EECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHH
Confidence            3458999999999999             998899999999654331110                      11 45788


Q ss_pred             HHhhhCCCC--ccceeccceEeeCCeEEEEEEecCCCCCcccc
Q 043820          216 TEVAKIYAR--SRPRSYPSVVIRPGYKVGLILELKPDPDPNPD  256 (282)
Q Consensus       216 ~~l~~l~H~--nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~  256 (282)
                      ..|..|...  .+.+.+     +-+.-. +||||+++-.|...
T Consensus       161 ~~L~~L~~~G~~VP~P~-----~~nRHa-VvMe~ieG~eL~~~  197 (304)
T COG0478         161 EALQRLYPEGVKVPKPI-----AWNRHA-VVMEYIEGVELYRL  197 (304)
T ss_pred             HHHHHhhhcCCCCCCcc-----ccccce-eeeehcccceeecc
Confidence            888888644  444444     223345 89999987666544

>PHA03265 envelope glycoprotein D; Provisional

Probab=82.05  E-value=1.3  Score=40.07  Aligned_cols=30  Identities=13%  Similarity=0.042  Sum_probs=16.5

Q ss_pred             ceEEEEehhHHHHHH-HHHHHHHHhhccccc
Q 043820          101 TTKIVVIVVPTAALL-AALILSNISEKTENN  130 (282)
Q Consensus       101 ~~iii~i~~~~~~~~-~l~~~~~rr~~~~~~  130 (282)
                      ..+++|..++.++++ +++++.||||+..++
T Consensus       350 ~g~~ig~~i~glv~vg~il~~~~rr~k~~~k  380 (402)
T PHA03265        350 VGISVGLGIAGLVLVGVILYVCLRRKKELKK  380 (402)
T ss_pred             cceEEccchhhhhhhhHHHHHHhhhhhhhhh
Confidence            445555544433333 347777887766543

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=82.04  E-value=2  Score=42.31  Aligned_cols=55  Identities=13%  Similarity=-0.006  Sum_probs=42.8

Q ss_pred             CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccceEeeCCeEEEEEEecC
Q 043820          192 DARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSVVIRPGYKVGLILELK  248 (282)
Q Consensus       192 ~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~~~~~~~~~~lv~Ey~  248 (282)
                      ++.+|.|...+.....-.. ..+.++.|..++||||++++ ......+..| ||+|-+
T Consensus        36 ~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL-~t~e~~~~~y-lvTErV   91 (690)
T KOG1243|consen   36 DGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYL-DTTEEEGTLY-LVTERV   91 (690)
T ss_pred             cCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhh-hhhcccCceE-EEeecc
Confidence            5788888877654442223 67788899999999999999 7777777778 999954

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=80.39  E-value=5.2  Score=34.11  Aligned_cols=63  Identities=11%  Similarity=0.049  Sum_probs=42.2

Q ss_pred             eecCCCcEEEEEEccCCCCchhH-HHHHHHHhhhCC-CCccceeccceEeeCCeEEEEEEecCCCCCcccc
Q 043820          188 GARIDARVVAARIVFAGSVTGIF-FARSVTEVAKIY-ARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPD  256 (282)
Q Consensus       188 g~~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~-H~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~  256 (282)
                      .... +..+.+|......   .. ..+|+.++..+. +-.+.+++ +....++..+ +|||++++.+|...
T Consensus        18 ~~~~-~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~-~~~~~~~~~~-lv~e~i~G~~l~~~   82 (244)
T cd05150          18 LDGK-NPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVI-DYGSDDGRAW-LLTSAVPGVPAAAL   82 (244)
T ss_pred             EcCC-CCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEE-EEEecCCccE-EEEEeeCCccHhHh
Confidence            5433 3567788775432   23 778888887773 44456777 6665555567 99999999888754

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PF01034 Syndecan: Syndecan domain; InterPro: IPR001050 The syndecans are transmembrane proteoglycans which are involved in the organisation of cytoskeleton and/or actin microfilaments, and have important roles as cell surface receptors during cell-cell and/or cell-matrix interactions [, ]

Probab=80.29  E-value=0.6  Score=31.42  Aligned_cols=27  Identities=22%  Similarity=0.016  Sum_probs=0.4

Q ss_pred             ceEEEEehhHHHHHHHH-HHHHHHhhcc
Q 043820          101 TTKIVVIVVPTAALLAA-LILSNISEKT  127 (282)
Q Consensus       101 ~~iii~i~~~~~~~~~l-~~~~~rr~~~  127 (282)
                      ..+|.|.++++++++++ +++++|.|++
T Consensus        12 aavIaG~Vvgll~ailLIlf~iyR~rkk   39 (64)
T PF01034_consen   12 AAVIAGGVVGLLFAILLILFLIYRMRKK   39 (64)
T ss_dssp             -------------------------S--
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            44566666665555554 4445554443

Structurally, these proteins consist of four separate domains: A signal sequence; An extracellular domain (ectodomain) of variable length whose sequence is not evolutionary conserved in the various forms of syndecans. The ectodomain contains the sites of attachment of the heparan sulphate glycosaminoglycan side chains; A transmembrane region; A highly conserved cytoplasmic domain of about 30 to 35 residues, which could interact with cytoskeletal proteins. The proteins known to belong to this family are: Syndecan 1. Syndecan 2 or fibroglycan. Syndecan 3 or neuroglycan or N-syndecan. Syndecan 4 or amphiglycan or ryudocan. Drosophila syndecan. Caenorhabditis elegans probable syndecan (F57C7.3). Syndecan-4, a transmembrane heparan sulphate proteoglycan, is a coreceptor with integrins in cell adhesion. It has been suggested to form a ternary signalling complex with protein kinase Calpha and phosphatidylinositol 4,5-bisphosphate (PIP2). Structural studies have demonstrated that the cytoplasmic domain undergoes a conformational transition and forms a symmetric dimer in the presence of phospholipid activator PIP2, and whose overall structure in solution exhibits a twisted clamp shape having a cavity in the centre of dimeric interface. In addition, it has been observed that the syndecan-4 variable domain interacts, strongly, not only with fatty acyl groups but also the anionic head group of PIP2. These findings indicate that PIP2 promotes oligomerisation of the syndecan-4 cytoplasmic domain for transmembrane signalling and cell-matrix adhesion [, ].; GO: 0008092 cytoskeletal protein binding, 0016020 membrane; PDB: 1EJQ_B 1EJP_B 1YBO_C 1OBY_Q.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	282
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	1e-09
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	3e-09
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	3e-08

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 57.2 bits (139), Expect = 1e-09
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 6/49 (12%)

Query: 132 ETDQVQNMDLELPLFELATIANATDNFS------INNKLGEGGFGPVYK 174
           E   ++  D     F    + N T+NF         NK+GEGGFG VYK
Sbjct: 1   ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYK 49

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 56.1 bits (136), Expect = 3e-09
 Identities = 17/29 (58%), Positives = 19/29 (65%)

Query: 146 FELATIANATDNFSINNKLGEGGFGPVYK 174
           F L  +  A+DNFS  N LG GGFG VYK
Sbjct: 20  FSLRELQVASDNFSNKNILGRGGFGKVYK 48

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 53.0 bits (128), Expect = 3e-08
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 146 FELATIANATDNFSINNKLGEGGFGPVYK 174
             L  +  AT+NF     +G G FG VYK
Sbjct: 29  VPLVDLEEATNNFDHKFLIGHGVFGKVYK 57

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	282
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.74
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.73
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.72
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.65
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.64
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.63
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.58
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.57
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.56
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.53
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.52
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.51
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.51
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.5
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.47
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.46
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.46
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.44
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.44
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.42
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.38
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.35
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.34
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.33
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.33
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.33
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.32
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.31
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.31
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.3
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.3
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.3
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.29
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.29
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.29
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.28
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.27
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.27
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.27
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.26
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.26
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.26
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.26
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.25
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.25
3uqc_A	286	Probable conserved transmembrane protein; structur	99.25
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.24
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.24
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.24
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.24
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.23
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.23
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.23
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.23
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.23
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.22
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.22
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.22
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.22
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.22
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.22
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.21
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.21
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.21
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.21
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.2
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.19
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.19
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.19
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.19
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.18
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.18
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.18
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.18
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.18
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.18
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.18
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.18
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.17
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.17
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.17
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.17
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.16
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.16
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.16
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.16
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.16
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.16
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.16
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.15
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.15
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.15
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.15
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.15
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.14
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.14
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.14
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.14
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.14
3niz_A	311	Rhodanese family protein; structural genomics, str	99.14
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.14
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.13
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.13
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.13
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.13
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.13
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.13
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.13
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.13
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.13
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.12
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.12
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.12
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.12
3bhy_A	283	Death-associated protein kinase 3; death associate	99.12
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.12
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.12
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.12
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.12
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.12
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.12
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.12
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.11
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.11
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.11
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.11
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.11
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.11
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.11
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.1
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.1
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.1
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.1
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.1
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.09
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.09
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.09
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.09
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.09
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.09
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.08
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.08
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.08
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.08
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.07
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.07
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.07
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.07
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.06
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.06
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.06
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.06
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.06
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.06
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.06
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.06
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.06
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.06
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.06
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.05
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.05
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.05
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.05
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.04
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.04
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.04
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.04
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.04
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.04
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.04
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.03
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.03
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.03
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.03
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.02
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.02
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.02
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.02
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.02
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.02
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.02
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.02
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.02
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.02
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.02
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.01
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.01
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	98.99
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	98.98
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	98.98
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	98.97
3an0_A	340	Dual specificity mitogen-activated protein kinase;	98.96
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	98.96
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	98.96
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	98.95
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	98.95
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	98.95
3fme_A	290	Dual specificity mitogen-activated protein kinase;	98.95
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	98.95
3rp9_A	458	Mitogen-activated protein kinase; structural genom	98.94
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	98.93
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	98.92
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	98.92
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	98.92
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	98.91
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	98.91
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	98.91
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	98.91
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	98.9
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	98.9
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	98.9
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	98.9
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	98.9
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	98.89
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	98.89
3aln_A	327	Dual specificity mitogen-activated protein kinase;	98.89
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	98.89
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	98.87
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	98.87
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	98.87
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	98.86
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	98.85
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	98.85
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	98.85
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	98.85
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	98.85
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	98.84
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	98.84
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	98.84
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	98.81
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	98.81
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	98.78
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	98.76
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	98.75
2dyl_A	318	Dual specificity mitogen-activated protein kinase	98.75
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	98.74
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	98.73
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	98.72
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	98.7
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	98.68
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	98.67
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	98.66
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	98.65
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	98.65
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	98.64
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	98.64
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	98.56
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	98.55
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	98.18
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	97.93
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	97.85
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	97.81
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	97.16
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.14
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	96.57
2ll3_A	82	Micronemal protein 4; cell adhesion; NMR {Toxoplas	95.66
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	94.77
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	94.31
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	89.79
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	89.46
2ks1_B	44	Epidermal growth factor receptor; ERBB1, ERBB2, tr	88.98
2yil_A	138	Microneme antigen L2; sugar binding protein, apple	88.65
2l2t_A	44	Receptor tyrosine-protein kinase ERBB-4; transmemb	88.42
2jwa_A	44	Receptor tyrosine-protein kinase ERBB-2; transmemb	88.35
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	86.65
3oja_A	487	Leucine-rich immune molecule 1; coiled-coil, helix	86.58
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	84.77
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	84.7
4a5v_A	161	MIC4, micronemal protein 4; adhesion; NMR {Toxopla	83.28
3ats_A	357	Putative uncharacterized protein; hypothetical pro	80.88
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	80.08

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.74  E-value=8.6e-19  Score=155.59  Aligned_cols=103  Identities=19%  Similarity=0.243  Sum_probs=83.6

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC------CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI------DARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPR  228 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~------~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~  228 (282)
                      ++|.+.++||+|+||.||+             |.+.      ++..||||+++.......+ |.+|+.+|++++|||||+
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~-------------a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~   79 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFL-------------AECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVK   79 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEE-------------EEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             HHeEEeeEEeeCCCcEEEE-------------EEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCcc
Confidence            4677779999999999999             6532      4788999999865555555 999999999999999999


Q ss_pred             eccceEeeCCeEEEEEEecCCCCCccccccCCC----------CCcCCCCCcccc
Q 043820          229 SYPSVVIRPGYKVGLILELKPDPDPNPDRLHSS----------RVRSLQYPDPAQ  273 (282)
Q Consensus       229 l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~----------~~~~l~W~~R~~  273 (282)
                      ++ |+|.+++..+ ||||||++|||.++|+...          ....|+|.++++
T Consensus        80 l~-g~~~~~~~~~-lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~  132 (299)
T 4asz_A           80 FY-GVCVEGDPLI-MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLH  132 (299)
T ss_dssp             EE-EEECSSSSEE-EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHH
T ss_pred             EE-EEEeeCCEEE-EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHH
Confidence            99 9999998888 9999999999999997532          234688887764

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.73  E-value=9.9e-19  Score=155.84  Aligned_cols=88  Identities=19%  Similarity=0.163  Sum_probs=73.5

Q ss_pred             ccccceecccCccceeccccccccccccceeec------CCCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCcccee
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGAR------IDARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~------~~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      +...++||+|+||.||+             |.+      .++..||||+++...... .+ |.+|+.+|++++|||||++
T Consensus        28 ~~~~~~lG~G~fG~Vyk-------------g~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l   94 (308)
T 4gt4_A           28 VRFMEELGEDRFGKVYK-------------GHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCL   94 (308)
T ss_dssp             EEEEEEEEECSSCEEEE-------------EEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CeEeeEeccCCCcEEEE-------------EEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCc
Confidence            44558999999999999             654      246789999997654333 34 9999999999999999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      + |+|.+++..+ ||||||++|||.++|+..
T Consensus        95 ~-g~~~~~~~~~-lV~Ey~~~G~L~~~L~~~  123 (308)
T 4gt4_A           95 L-GVVTKDQPLS-MIFSYCSHGDLHEFLVMR  123 (308)
T ss_dssp             E-EEECSSSSCE-EEEECCSSCBHHHHHHTT
T ss_pred             c-eEEEECCEEE-EEEEcCCCCcHHHHHHhh
Confidence            9 9999988888 999999999999999753

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.72  E-value=2.6e-18  Score=154.50  Aligned_cols=103  Identities=18%  Similarity=0.196  Sum_probs=85.0

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC------CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI------DARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPR  228 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~------~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~  228 (282)
                      ++|...++||+|+||.||+             |.+.      ++..||||+++.......+ |.+|+.+|++++|||||+
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~-------------a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~  107 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFL-------------AECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR  107 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEE-------------EEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             HHeEEEEEEccCCCcEEEE-------------EEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCc
Confidence            4566779999999999999             6542      4788999999865555555 999999999999999999


Q ss_pred             eccceEeeCCeEEEEEEecCCCCCccccccCCCC------------CcCCCCCcccc
Q 043820          229 SYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSR------------VRSLQYPDPAQ  273 (282)
Q Consensus       229 l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~------------~~~l~W~~R~~  273 (282)
                      ++ |+|.+++..+ ||||||++|+|.++|+....            ...|+|.++++
T Consensus       108 l~-g~~~~~~~~~-lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~  162 (329)
T 4aoj_A          108 FF-GVCTEGRPLL-MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLA  162 (329)
T ss_dssp             EE-EEECSSSSEE-EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHH
T ss_pred             EE-EEEEECCEEE-EEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHH
Confidence            99 9999998888 99999999999999975431            23578877764

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.65  E-value=1.8e-17  Score=150.40  Aligned_cols=106  Identities=18%  Similarity=0.244  Sum_probs=83.6

Q ss_pred             cCHHHHHHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchh-H-HHHHHHHhhhCCC
Q 043820          146 FELATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGI-F-FARSVTEVAKIYA  223 (282)
Q Consensus       146 ~~~~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~-~-f~~e~~~l~~l~H  223 (282)
                      ++.++|+...++|...+.||+|+||.||++...+.       +....+..||||++........ + |.+|+.+|.++.|
T Consensus        54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~-------~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~h  126 (353)
T 4ase_A           54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGI-------DKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH  126 (353)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETS-------SSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCC
T ss_pred             CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCC-------CcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCC
Confidence            55667888889999999999999999999332222       1122346899999976554443 3 9999999999965


Q ss_pred             -CccceeccceEeeCC-eEEEEEEecCCCCCccccccCC
Q 043820          224 -RSRPRSYPSVVIRPG-YKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       224 -~nlv~l~~g~~~~~~-~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                       ||||+++ |+|.+.+ ..+ ||||||++|+|.++|+..
T Consensus       127 hpnIV~l~-g~~~~~~~~~~-iV~Ey~~~G~L~~~L~~~  163 (353)
T 4ase_A          127 HLNVVNLL-GACTKPGGPLM-VIVEFCKFGNLSTYLRSK  163 (353)
T ss_dssp             CTTBCCEE-EEECCTTSCCE-EEEECCTTEEHHHHHHHT
T ss_pred             CCcEEEEE-EEEEecCCEEE-EEEEcCCCCCHHHHHHhc
Confidence             8999999 9997754 456 999999999999999753

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.64  E-value=8.1e-17  Score=143.28  Aligned_cols=101  Identities=16%  Similarity=0.153  Sum_probs=81.4

Q ss_pred             HhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCch--hH-HHHHHHHhhhCCCCcccee
Q 043820          153 NATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTG--IF-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       153 ~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      ...+++...++||+|+||.||+             |.+.  ..||||.++......  .+ |.+|+.+|++++|||||++
T Consensus        33 i~~~~l~l~~~iG~G~fG~Vy~-------------~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l   97 (307)
T 3omv_A           33 IEASEVMLSTRIGSGSFGTVYK-------------GKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLF   97 (307)
T ss_dssp             CCTTSCCEEEECCCCSSSEEEE-------------EESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             EcHHHeEEeeEEeeCCCcEEEE-------------EEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeE
Confidence            3445677789999999999999             8764  369999997543332  34 9999999999999999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcccc
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPAQ  273 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~~  273 (282)
                      + |+|.+ +..+ ||||||++|+|.++|+...  ..++|.++++
T Consensus        98 ~-g~~~~-~~~~-iVmEy~~gGsL~~~l~~~~--~~l~~~~~~~  136 (307)
T 3omv_A           98 M-GYMTK-DNLA-IVTQWCEGSSLYKHLHVQE--TKFQMFQLID  136 (307)
T ss_dssp             E-EEECS-SSCE-EEEECCSSCBHHHHHHTSC--CCCCHHHHHH
T ss_pred             E-EEEEC-CeEE-EEEEcCCCCCHHHHHhhcC--CCCCHHHHHH
Confidence            9 98865 4567 9999999999999997654  3588887753

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.63  E-value=5.9e-17  Score=143.96  Aligned_cols=96  Identities=10%  Similarity=0.114  Sum_probs=76.0

Q ss_pred             CccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccceEe
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSVVI  235 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~~~  235 (282)
                      ++.+.++||+|+||.||+             |.+ +|..||||+++... .... +..|+..+.+++|||||+++ |+|.
T Consensus         4 ~i~L~~~iG~G~fG~Vy~-------------~~~-~g~~VAvK~l~~~~-~~~~~~e~Ei~~~~~l~HpNIv~l~-g~~~   67 (303)
T 3hmm_A            4 TIVLQESIGKGRFGEVWR-------------GKW-RGEEVAVKIFSSRE-ERSWFREAEIYQTVMLRHENILGFI-AADN   67 (303)
T ss_dssp             GEEEEEEEEECSSSEEEE-------------EEE-TTEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEE-EEEE
T ss_pred             EEEEEEEEeeCCCeEEEE-------------EEE-CCEEEEEEEECccc-hhhHHHHHHHHHHhcCCCCCCCcEE-EEEE
Confidence            356678999999999999             877 57899999996432 1122 55677777889999999999 9998


Q ss_pred             eCC----eEEEEEEecCCCCCccccccCCCCCcCCCCCcccc
Q 043820          236 RPG----YKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPAQ  273 (282)
Q Consensus       236 ~~~----~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~~  273 (282)
                      ..+    ..+ ||||||++|+|.++|+..    .++|..+++
T Consensus        68 ~~~~~~~~~~-lV~Ey~~~gsL~~~l~~~----~l~~~~~~~  104 (303)
T 3hmm_A           68 KDNGTWTQLW-LVSDYHEHGSLFDYLNRY----TVTVEGMIK  104 (303)
T ss_dssp             EECSSSEEEE-EEEECCTTCBHHHHHHHC----CBCHHHHHH
T ss_pred             ecCCCceEEE-EEecCCCCCcHHHHHHhC----CCCHHHHHH
Confidence            754    345 999999999999999753    478887764

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.58  E-value=2.1e-15  Score=136.40  Aligned_cols=90  Identities=14%  Similarity=0.126  Sum_probs=72.1

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch--hH-HHHHHHHhhhCCCCccceecc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG--IF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      ++|...+.||+|+||.||+             +... +|..||||.+.......  .+ |.+|+.+|.+++|||||+++ 
T Consensus        24 e~Y~~~~~lG~G~fg~V~~-------------a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~-   89 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAIL-------------VKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYR-   89 (350)
T ss_dssp             CCEEEEEEC------CEEE-------------EEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEE-
T ss_pred             cceEEeEEEecCCCeEEEE-------------EEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEE-
Confidence            5788889999999999999             7644 58999999997543332  23 99999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +++.+.+..+ |||||+++|+|.++|...
T Consensus        90 ~~~~~~~~~y-iVmEy~~gg~L~~~i~~~  117 (350)
T 4b9d_A           90 ESFEENGSLY-IVMDYCEGGDLFKRINAQ  117 (350)
T ss_dssp             EEEEETTEEE-EEEECCTTCBHHHHHHHT
T ss_pred             EEEEECCEEE-EEEeCCCCCcHHHHHHHc
Confidence            9999988888 999999999999999644

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.57  E-value=2.1e-15  Score=136.18  Aligned_cols=89  Identities=13%  Similarity=0.051  Sum_probs=78.2

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      ..|...++||+|+||.||+             +... +|..||||.+........+ +.+|+.+|..++|||||+++ ++
T Consensus        74 ~~y~~~~~iG~G~fG~V~~-------------a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~-~~  139 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCI-------------ATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMY-NS  139 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEE-------------EEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEE-EE
T ss_pred             HhcEEeEEeecCcCeEEEE-------------EEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEE-EE
Confidence            4577778999999999999             7754 5899999999765444555 99999999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccC
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +.+.+..+ ||||||++|+|.+++..
T Consensus       140 ~~~~~~~~-ivmEy~~gg~L~~~l~~  164 (346)
T 4fih_A          140 YLVGDELW-VVMEFLEGGALTDIVTH  164 (346)
T ss_dssp             EEETTEEE-EEECCCTTEEHHHHHHH
T ss_pred             EEECCEEE-EEEeCCCCCcHHHHHHc
Confidence            99999888 99999999999998864

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.56  E-value=4e-15  Score=137.60  Aligned_cols=90  Identities=13%  Similarity=0.050  Sum_probs=79.2

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccc
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      ...|...++||+|+||.||+             +... .|..||||.+........+ +.+|+.+|..++|||||+++ +
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~-------------a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~-~  215 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCI-------------ATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMY-N  215 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEE-------------EEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEE-E
T ss_pred             hHhcEeeeEeccCcCcEEEE-------------EEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceE-E
Confidence            35588889999999999999             7654 5899999999765555556 99999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ++.+.+..+ ||||||++|+|.++|..
T Consensus       216 ~~~~~~~~~-iVmEy~~gG~L~~~i~~  241 (423)
T 4fie_A          216 SYLVGDELW-VVMEFLEGGALTDIVTH  241 (423)
T ss_dssp             EEEETTEEE-EEEECCTTEEHHHHHHH
T ss_pred             EEEECCEEE-EEEeCCCCCcHHHHHhc
Confidence            999999888 99999999999998853

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.53  E-value=7.4e-15  Score=130.21  Aligned_cols=90  Identities=18%  Similarity=0.157  Sum_probs=72.6

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchh-H-HHHHHHHhhhCCCCccceeccce
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGI-F-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~-~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      +|...+.||+|+||.||+             +... ++..||||.++....... + +.+|+.+|.+++|||||+++ ++
T Consensus         6 dy~~~~~lG~G~fg~V~~-------------a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~-~~   71 (299)
T 4g31_A            6 DFEPIQCLGRGGFGVVFE-------------AKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYF-NA   71 (299)
T ss_dssp             HEEEEEEEEECC--EEEE-------------EEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEE-EE
T ss_pred             hCEEeeEEecCCCeEEEE-------------EEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEE-EE
Confidence            578889999999999999             7644 689999999975443333 3 99999999999999999999 98


Q ss_pred             EeeCCe------------EEEEEEecCCCCCccccccCCC
Q 043820          234 VIRPGY------------KVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       234 ~~~~~~------------~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      +.+.+.            .+ +||||+++|+|.++|....
T Consensus        72 ~~~~~~~~~~~~~~~~~~l~-ivmE~~~gg~L~~~l~~~~  110 (299)
T 4g31_A           72 WLEKNTTEKLQPSSPKVYLY-IQMQLCRKENLKDWMNGRC  110 (299)
T ss_dssp             EEEEC----------CEEEE-EEEECCCSCCHHHHHHTCC
T ss_pred             EEecCccccccccCCCcEEE-EEEecCCCCcHHHHHHhcC
Confidence            865442            35 9999999999999997654

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.52  E-value=1.1e-14  Score=128.64  Aligned_cols=87  Identities=18%  Similarity=0.133  Sum_probs=70.3

Q ss_pred             cccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch--hH-HHHHHHHhhhCCCCccceeccceE
Q 043820          159 SINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG--IF-FARSVTEVAKIYARSRPRSYPSVV  234 (282)
Q Consensus       159 ~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l~H~nlv~l~~g~~  234 (282)
                      ...++||+|+||.||+             |... .+..||+|.+.......  .+ |.+|+.+|++++|||||+++ +++
T Consensus        29 ~~~~~iG~G~fg~Vy~-------------a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~-~~~   94 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYK-------------GLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFY-DSW   94 (290)
T ss_dssp             EEEEEEEECSSEEEEE-------------EEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEE-EEE
T ss_pred             EeeeEEecCcCcEEEE-------------EEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEE-EEE
Confidence            4457899999999999             7754 58899999996543222  33 99999999999999999999 987


Q ss_pred             ee---CCeEEEEEEecCCCCCccccccC
Q 043820          235 IR---PGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       235 ~~---~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ..   ++..++||||||++|+|.++|..
T Consensus        95 ~~~~~~~~~~~lvmEy~~gg~L~~~l~~  122 (290)
T 3fpq_A           95 ESTVKGKKCIVLVTELMTSGTLKTYLKR  122 (290)
T ss_dssp             EEEETTEEEEEEEEECCCSCBHHHHHHH
T ss_pred             eeccCCCcEEEEEEeCCCCCCHHHHHHh
Confidence            54   22333499999999999999964

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.51  E-value=5e-15  Score=131.81  Aligned_cols=89  Identities=15%  Similarity=0.129  Sum_probs=76.4

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhCCCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ++|...+.||+|+||.||+             +... ++..||+|.++...   ....+ +.+|+.+|.+++|||||+++
T Consensus        32 ~dy~i~~~lG~G~fg~V~~-------------a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~   98 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVL-------------ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY   98 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEE-------------EEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred             cccEEEEEEecccCeEEEE-------------EEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence            4688889999999999999             7644 68999999996432   22234 99999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                       ++..+.+..+ |||||+++|+|.++|..
T Consensus        99 -~~~~~~~~~y-ivmEy~~gG~L~~~i~~  125 (311)
T 4aw0_A           99 -FTFQDDEKLY-FGLSYAKNGELLKYIRK  125 (311)
T ss_dssp             -EEEECSSEEE-EEECCCTTEEHHHHHHH
T ss_pred             -EEEEeCCEEE-EEEecCCCCCHHHHHHH
Confidence             9998888888 99999999999999864

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.51  E-value=1e-14  Score=129.59  Aligned_cols=117  Identities=26%  Similarity=0.364  Sum_probs=97.6

Q ss_pred             CCCCccCHHHHHHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH--HHHHHHHh
Q 043820          141 LELPLFELATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF--FARSVTEV  218 (282)
Q Consensus       141 ~~~~~~~~~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~--f~~e~~~l  218 (282)
                      ...+.|++.++..++++|...+.||+|+||.||+             +...++..||+|.+.........  |.+|+.++
T Consensus        15 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l   81 (326)
T 3uim_A           15 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYK-------------GRLADGTLVAVKRLKEERTQGGELQFQTEVEMI   81 (326)
T ss_dssp             CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEE-------------ECCSSSCCEEEEECCC-----CCCHHHHHHHGG
T ss_pred             CccceecHHHHHHHhhccccceeEecCCCcEEEE-------------EEecCCCEEEEEEeccccCchHHHHHHHHHHHH
Confidence            3456799999999999999999999999999999             87777899999999765433333  99999999


Q ss_pred             hhCCCCccceeccceEeeCCeEEEEEEecCCCCCccccccCCCC-CcCCCCCccc
Q 043820          219 AKIYARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSR-VRSLQYPDPA  272 (282)
Q Consensus       219 ~~l~H~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-~~~l~W~~R~  272 (282)
                      ..++|+||++++ +++......+ +||||+++|+|.+++..... ...++|..+.
T Consensus        82 ~~l~h~~iv~~~-~~~~~~~~~~-lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  134 (326)
T 3uim_A           82 SMAVHRNLLRLR-GFCMTPTERL-LVYPYMANGSVASCLRERPESQPPLDWPKRQ  134 (326)
T ss_dssp             GTCCCTTBCCCC-EEECCSSCCE-EEEECCTTCBHHHHHHCCSTTCCCCCHHHHH
T ss_pred             HhccCCCccceE-EEEecCCceE-EEEEeccCCCHHHHHHhccccCCCCCHHHHH
Confidence            999999999999 9999888888 99999999999999986543 3347776554

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.50  E-value=1.5e-14  Score=128.55  Aligned_cols=114  Identities=21%  Similarity=0.211  Sum_probs=95.1

Q ss_pred             CccCHHHHHHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH-HHHHHHHhhhCC
Q 043820          144 PLFELATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF-FARSVTEVAKIY  222 (282)
Q Consensus       144 ~~~~~~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~  222 (282)
                      ..+++.++..++++|...+.||+|+||.||+             +...++..||+|.+........+ |.+|+.++..++
T Consensus        27 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~-------------~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~   93 (321)
T 2qkw_B           27 YRVPLVDLEEATNNFDHKFLIGHGVFGKVYK-------------GVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCR   93 (321)
T ss_dssp             ---CCSCCCCCCCCCSCCCCSCBCSSSEEEE-------------EECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCC
T ss_pred             eeecHHHHHHHHhccCccceeecCCCeeEEE-------------EEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCC
Confidence            3455667778899999999999999999999             88777899999998766555556 999999999999


Q ss_pred             CCccceeccceEeeCCeEEEEEEecCCCCCccccccCCCC-CcCCCCCccc
Q 043820          223 ARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSR-VRSLQYPDPA  272 (282)
Q Consensus       223 H~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-~~~l~W~~R~  272 (282)
                      ||||++++ +++...+..+ +||||+++|+|.+++..... ...++|..++
T Consensus        94 h~~iv~~~-~~~~~~~~~~-lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  142 (321)
T 2qkw_B           94 HPHLVSLI-GFCDERNEMI-LIYKYMENGNLKRHLYGSDLPTMSMSWEQRL  142 (321)
T ss_dssp             CTTBCCEE-EECCCTTCCE-EEEECCTTCBTGGGSSSSCCCSCCCCHHHHH
T ss_pred             CCCEeeEE-EEEcCCCeEE-EEEEcCCCCcHHHHHhccCCCccccCHHHHH
Confidence            99999999 9999888888 99999999999999976542 2346776554

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.47  E-value=2.4e-14  Score=128.78  Aligned_cols=86  Identities=14%  Similarity=0.099  Sum_probs=74.2

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhHHHHHHHHhhhCCCCccceeccce
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      .+.|...++||+|+||.||+             +... .|..||||.++....    +.+|+.+|..++|||||+++ ++
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~-------------a~~~~~g~~vAiK~i~~~~~----~~~E~~il~~l~HpnIV~l~-~~  118 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHR-------------MKDKQTGFQCAVKKVRLEVF----RVEELVACAGLSSPRIVPLY-GA  118 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEE-------------EEETTTCCEEEEEEEETTTC----CTHHHHTTTTCCCTTBCCEE-EE
T ss_pred             hhheEeCcEeccCCCeEEEE-------------EEECCCCCEEEEEEECHHHh----HHHHHHHHHhCCCCCCCcEE-EE
Confidence            34577778999999999999             7654 589999999964211    56899999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccC
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +.+++..+ ||||||++|+|.++|..
T Consensus       119 ~~~~~~~~-ivmEy~~gg~L~~~l~~  143 (336)
T 4g3f_A          119 VREGPWVN-IFMELLEGGSLGQLIKQ  143 (336)
T ss_dssp             EEETTEEE-EEECCCTTCBHHHHHHH
T ss_pred             EEECCEEE-EEEeccCCCcHHHHHHH
Confidence            99988888 99999999999999964

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.46  E-value=5.5e-14  Score=123.11  Aligned_cols=89  Identities=18%  Similarity=0.233  Sum_probs=71.2

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc---hhH-HHHHHHHhhhCCCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT---GIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~---~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ++|...+.||+|+||.||+             +... +++.||+|.++.....   ..+ +.+|+.+|+.++|||||+++
T Consensus        13 g~Y~i~~~lG~G~fg~V~~-------------~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~   79 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKL-------------AYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLY   79 (275)
T ss_dssp             -CCEEEEEEEC---CCEEE-------------EECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             eCeEEEEEEecCcCeEEEE-------------EEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEE
Confidence            5788889999999999999             7654 5899999999754322   233 99999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                       ++..+.+..+ +||||+ +|+|.++|...
T Consensus        80 -~~~~~~~~~~-ivmEy~-~g~L~~~l~~~  106 (275)
T 3hyh_A           80 -DVIKSKDEII-MVIEYA-GNELFDYIVQR  106 (275)
T ss_dssp             -EEEECSSEEE-EEEECC-CEEHHHHHHHS
T ss_pred             -EEEEECCEEE-EEEeCC-CCCHHHHHHHc
Confidence             9998888888 999999 68999998653

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.46  E-value=1e-14  Score=129.47  Aligned_cols=89  Identities=15%  Similarity=0.152  Sum_probs=70.6

Q ss_pred             cCccccceecccCccceeccccccccccccceeec----CCCcEEEEEEccCCCCc--hhH-HHHHHHHhhhCCCCccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR----IDARVVAARIVFAGSVT--GIF-FARSVTEVAKIYARSRPR  228 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~----~~~~~vAvK~l~~~~~~--~~~-f~~e~~~l~~l~H~nlv~  228 (282)
                      ++|...+.||+|+||.||+             +..    ..++.||+|.++.....  ... +.+|+.+|.+++|||||+
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~-------------a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~   90 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFL-------------VKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK   90 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEE-------------EEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEEC
T ss_pred             cccEEEEEEecCCCeEEEE-------------EEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCe
Confidence            4688889999999999999             643    24689999999754322  222 899999999999999999


Q ss_pred             eccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          229 SYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       229 l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ++ +++.+.+..+ |||||+++|+|.++|..
T Consensus        91 l~-~~~~~~~~~~-ivmEy~~gg~L~~~l~~  119 (304)
T 3ubd_A           91 LH-YAFQTEGKLY-LILDFLRGGDLFTRLSK  119 (304)
T ss_dssp             EE-EEEEETTEEE-EEECCCTTCEEHHHHHH
T ss_pred             EE-EEEEECCEEE-EEEEcCCCCCHHHHHHh
Confidence            99 9999988888 99999999999999864

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.44  E-value=1.1e-13  Score=121.73  Aligned_cols=115  Identities=23%  Similarity=0.244  Sum_probs=95.4

Q ss_pred             CCCccCHHHHHHhccCcccc------ceecccCccceeccccccccccccceeecCCCcEEEEEEccCCC----CchhH-
Q 043820          142 ELPLFELATIANATDNFSIN------NKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGS----VTGIF-  210 (282)
Q Consensus       142 ~~~~~~~~el~~at~~f~~~------~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~----~~~~~-  210 (282)
                      ....|++.++..++++|...      +.||+|+||.||+             +.. ++..||+|.+....    ....+ 
T Consensus        11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~-------------~~~-~~~~vavK~~~~~~~~~~~~~~~~   76 (307)
T 2nru_A           11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYK-------------GYV-NNTTVAVKKLAAMVDITTEELKQQ   76 (307)
T ss_dssp             CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEE-------------EES-SSCEEEEEEECCCTTSCTTTHHHH
T ss_pred             CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEE-------------EEE-CCceEEEEEEecccCcchHHHHHH
Confidence            45679999999999999877      8899999999999             876 57899999986432    12234 


Q ss_pred             HHHHHHHhhhCCCCccceeccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          211 FARSVTEVAKIYARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       211 f~~e~~~l~~l~H~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      |.+|+.++..++||||++++ +++...+..+ +||||+++|+|.+++........++|..+.
T Consensus        77 ~~~E~~~l~~l~h~~i~~~~-~~~~~~~~~~-lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~  136 (307)
T 2nru_A           77 FDQEIKVMAKCQHENLVELL-GFSSDGDDLC-LVYVYMPNGSLLDRLSCLDGTPPLSWHMRC  136 (307)
T ss_dssp             HHHHHHHHHHCCCTTBCCEE-EEECSSSSCE-EEEECCTTCBHHHHHHTGGGCCCCCHHHHH
T ss_pred             HHHHHHHHHhcCCCCeEEEE-EEEecCCceE-EEEEecCCCcHHHHHHhccCCCCCCHHHHH
Confidence            99999999999999999999 9998888888 999999999999998754333456776553

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.44  E-value=1.5e-13  Score=122.43  Aligned_cols=111  Identities=13%  Similarity=0.022  Sum_probs=90.9

Q ss_pred             CCCccCHHHHHHhccC----------ccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH
Q 043820          142 ELPLFELATIANATDN----------FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF  210 (282)
Q Consensus       142 ~~~~~~~~el~~at~~----------f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~  210 (282)
                      ..+.++++++..+++.          |...+.||+|+||.||+             +... +|..||||.+........+
T Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~-------------a~~~~~g~~vavK~~~~~~~~~~~   87 (321)
T 2c30_A           21 QSGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCL-------------AREKHSGRQVAVKMMDLRKQQRRE   87 (321)
T ss_dssp             ----CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEE-------------EEETTTCCEEEEEEEETTTCCSHH
T ss_pred             cCCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEE-------------EEECCCCcEEEEEEEeccchhHHH
Confidence            4467899999988875          55667999999999999             8765 6899999999765555556


Q ss_pred             -HHHHHHHhhhCCCCccceeccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          211 -FARSVTEVAKIYARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       211 -f~~e~~~l~~l~H~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                       +.+|+.++..++|+||++++ +++...+..+ +||||+++|+|.+++...    .++|..+
T Consensus        88 ~~~~E~~~l~~l~h~niv~~~-~~~~~~~~~~-lv~e~~~~~~L~~~l~~~----~l~~~~~  143 (321)
T 2c30_A           88 LLFNEVVIMRDYQHFNVVEMY-KSYLVGEELW-VLMEFLQGGALTDIVSQV----RLNEEQI  143 (321)
T ss_dssp             HHHHHHHHHTTCCCTTBCCEE-EEEEETTEEE-EEECCCCSCBHHHHHTTC----CCCHHHH
T ss_pred             HHHHHHHHHHhCCCCCcceEE-EEEEECCEEE-EEEecCCCCCHHHHHHhc----CCCHHHH
Confidence             99999999999999999999 9999999888 999999999999988642    3555544

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.42  E-value=2e-13  Score=131.22  Aligned_cols=91  Identities=15%  Similarity=0.194  Sum_probs=79.2

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      ++|.+.+.||+|+||.||+             +... .|..||+|.+........+ +.+|+.+|..++|||||+++ ++
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~-------------~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~-~~  222 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHR-------------VTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLH-DA  222 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEE-------------EEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEE-EE
T ss_pred             cccEEEEEEeeccCeEEEE-------------EEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEE-EE
Confidence            5788889999999999999             7654 5899999999765444445 99999999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccCCC
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      +.+....+ ||||||++|+|.++|....
T Consensus       223 ~~~~~~~~-iv~E~~~gg~L~~~i~~~~  249 (573)
T 3uto_A          223 FEDDNEMV-MIYEFMSGGELFEKVADEH  249 (573)
T ss_dssp             EECSSEEE-EEEECCCCCBHHHHHTCTT
T ss_pred             EEECCEEE-EEEeecCCCcHHHHHHHhC
Confidence            98888888 9999999999999986543

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.38  E-value=1.9e-13  Score=122.83  Aligned_cols=109  Identities=17%  Similarity=0.226  Sum_probs=86.1

Q ss_pred             CccCHHHHHHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchh-H-HHHHHHHhhhC
Q 043820          144 PLFELATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGI-F-FARSVTEVAKI  221 (282)
Q Consensus       144 ~~~~~~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~-~-f~~e~~~l~~l  221 (282)
                      ..+...+++...++|...+.||+|+||.||++...+.       ....++..||+|.+........ + |.+|+.++.++
T Consensus        10 ~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~-------~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l   82 (359)
T 3vhe_A           10 LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGI-------DKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI   82 (359)
T ss_dssp             SCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESS-------SSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcccccccccceeeceeecCCCCceEEEEEeccc-------cccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhh
Confidence            3466778888889999999999999999999221111       0233568999999976544333 3 99999999999


Q ss_pred             -CCCccceeccceEeeCCe-EEEEEEecCCCCCccccccCCC
Q 043820          222 -YARSRPRSYPSVVIRPGY-KVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       222 -~H~nlv~l~~g~~~~~~~-~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                       +|||||+++ |++...+. .+ +||||+++|+|.++|....
T Consensus        83 ~~hpniv~~~-~~~~~~~~~~~-iv~e~~~~g~L~~~l~~~~  122 (359)
T 3vhe_A           83 GHHLNVVNLL-GACTKPGGPLM-VIVEFCKFGNLSTYLRSKR  122 (359)
T ss_dssp             CCCTTBCCEE-EEECSTTSCCE-EEEECCTTEEHHHHHHTTT
T ss_pred             cCCcceeeee-eeeecCCCceE-EEEEecCCCcHHHHHHhcc
Confidence             889999999 99887665 55 9999999999999997654

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.35  E-value=9.1e-13  Score=121.23  Aligned_cols=89  Identities=16%  Similarity=0.138  Sum_probs=72.6

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch--hH-HHHHHHHhhhCCCCccceecc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG--IF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      ++|...+.||+|+||.||+             +... .|..||||+++......  .+ +.+|+.+|..++|||||+++ 
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~-------------a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~-  119 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSS-------------ARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIK-  119 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEE-------------EEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEE-
T ss_pred             CCeEEEEEEecccCeEEEE-------------EEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEe-
Confidence            4688889999999999999             7654 68999999997543322  23 89999999999999999999 


Q ss_pred             ceEeeC------CeEEEEEEecCCCCCccccccCC
Q 043820          232 SVVIRP------GYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       232 g~~~~~------~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +++...      +..+ ||||||+ |+|.++|...
T Consensus       120 ~~~~~~~~~~~~~~~~-ivmE~~~-g~L~~~i~~~  152 (398)
T 4b99_A          120 DILRPTVPYGEFKSVY-VVLDLME-SDLHQIIHSS  152 (398)
T ss_dssp             EECCCSSCTTTCCCEE-EEEECCS-EEHHHHHTSS
T ss_pred             eeeecccccccCCEEE-EEEeCCC-CCHHHHHHhc
Confidence            887542      4556 9999996 7899998754

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.34  E-value=5.5e-13  Score=121.44  Aligned_cols=100  Identities=17%  Similarity=0.157  Sum_probs=81.3

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC----CCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCcccee
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI----DARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~----~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      ++|...+.||+|+||.||+             |...    .+..||+|.+....... .+ |.+|+.+|.+++||||+++
T Consensus        45 ~~~~~~~~lG~G~fg~Vy~-------------~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~  111 (373)
T 2qol_A           45 TNISIDKVVGAGEFGEVCS-------------GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL  111 (373)
T ss_dssp             GGCCCCEEEEECSSSEEEE-------------C-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             hhceeeeEEeeCCCeEEEE-------------EEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeE
Confidence            4677889999999999999             7643    46789999997643333 33 9999999999999999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      + |++...+..+ +||||+++|+|.+++....  ..++|..++
T Consensus       112 ~-~~~~~~~~~~-lv~e~~~~~sL~~~l~~~~--~~~~~~~~~  150 (373)
T 2qol_A          112 E-GVVTKSKPVM-IVTEYMENGSLDSFLRKHD--AQFTVIQLV  150 (373)
T ss_dssp             E-EEECSSSSCE-EEEECCTTCBHHHHHHTTT--TCSCHHHHH
T ss_pred             E-EEEeeCCceE-EEEeCCCCCcHHHHHHhCC--CCCCHHHHH
Confidence            9 9999888888 9999999999999997543  246665543

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.33  E-value=8.4e-13  Score=116.45  Aligned_cols=100  Identities=12%  Similarity=0.071  Sum_probs=83.3

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      ++|...+.||+|+||.||+             +... ++..||+|.+........+ |.+|+.++..++||||++++ ++
T Consensus        10 ~~~~~~~~lG~G~~g~V~~-------------~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~-~~   75 (310)
T 3s95_A           10 SDLIHGEVLGKGCFGQAIK-------------VTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFI-GV   75 (310)
T ss_dssp             GGEEEEEEEECCSSEEEEE-------------EEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEE-EE
T ss_pred             hHeeccceecCCCCEEEEE-------------EEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEE-EE
Confidence            4677789999999999999             7754 5889999988654444445 99999999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      +..++..+ +||||+++|+|.+++....  ..++|..++
T Consensus        76 ~~~~~~~~-lv~e~~~~~~L~~~l~~~~--~~~~~~~~~  111 (310)
T 3s95_A           76 LYKDKRLN-FITEYIKGGTLRGIIKSMD--SQYPWSQRV  111 (310)
T ss_dssp             EEETTEEE-EEEECCTTCBHHHHHHHCC--TTSCHHHHH
T ss_pred             EecCCeeE-EEEEecCCCcHHHHHHhcc--CCCCHHHHH
Confidence            99998888 9999999999999997533  246665543

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.33  E-value=3.2e-13  Score=127.59  Aligned_cols=107  Identities=15%  Similarity=0.133  Sum_probs=86.3

Q ss_pred             HHHHHhccCccccceecccCccceeccccccccccccceeecCC-CcEEEEEEccCCCCchhHHHHHHHHhhhCCCCccc
Q 043820          149 ATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARID-ARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRP  227 (282)
Q Consensus       149 ~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~-~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~nlv  227 (282)
                      .+++....+|...+.||+|+||.||+             |.... +..||||.+.........|.+|+.+|.+++|+|||
T Consensus       213 ~~~~~~~~~~~~~~~lG~G~fg~Vy~-------------~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv  279 (495)
T 1opk_A          213 DKWEMERTDITMKHKLGGGQYGEVYE-------------GVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV  279 (495)
T ss_dssp             SCCBCCGGGEEEEEESGGGTTSSEEE-------------EEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBC
T ss_pred             cccccCHHHceeeeEecCCCCeEEEE-------------EEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEe
Confidence            34444566788889999999999999             87654 78999999976544333399999999999999999


Q ss_pred             eeccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          228 RSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       228 ~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      +++ |++...+..+ +||||+++|+|.++|.... ...++|..+
T Consensus       280 ~l~-~~~~~~~~~~-lv~E~~~~g~L~~~l~~~~-~~~~~~~~~  320 (495)
T 1opk_A          280 QLL-GVCTREPPFY-IITEFMTYGNLLDYLRECN-RQEVSAVVL  320 (495)
T ss_dssp             CEE-EEECSSSSCE-EEEECCTTCBHHHHHHHSC-TTTSCHHHH
T ss_pred             eEE-EEEecCCcEE-EEEEccCCCCHHHHHHhcC-cCCCCHHHH
Confidence            999 9999888888 9999999999999997533 223555544

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.33  E-value=2.3e-13  Score=126.76  Aligned_cols=100  Identities=13%  Similarity=0.050  Sum_probs=84.4

Q ss_pred             cCHHHHHHhccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhh
Q 043820          146 FELATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAK  220 (282)
Q Consensus       146 ~~~~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~  220 (282)
                      +.+.++...+++|...++||+|+||.||+             +... .+..||+|++....   ..... +.+|..++..
T Consensus        64 ~~~~~~~~~~~~y~~~~~LG~G~fG~V~~-------------~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~  130 (437)
T 4aw2_A           64 SKVKQMRLHREDFEILKVIGRGAFGEVAV-------------VKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN  130 (437)
T ss_dssp             HHHHHHSCCGGGEEEEEEEEECSSEEEEE-------------EEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHH
T ss_pred             chhhcccCChhheEEEEEEEeCCCEEEEE-------------EEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHh
Confidence            34566677788999999999999999999             8765 47899999986422   12223 9999999999


Q ss_pred             CCCCccceeccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          221 IYARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       221 l~H~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ++|+|||+++ +++.+.+..+ |||||+++|+|.++|...
T Consensus       131 ~~hp~Iv~l~-~~~~~~~~~~-lV~Ey~~gg~L~~~l~~~  168 (437)
T 4aw2_A          131 GDSKWITTLH-YAFQDDNNLY-LVMDYYVGGDLLTLLSKF  168 (437)
T ss_dssp             SCTTTBCCEE-EEEECSSEEE-EEECCCTTCBHHHHHHTT
T ss_pred             CCCCCEEEEE-EEEeeCCEEE-EEEecCCCCcHHHHHHHc
Confidence            9999999999 9999888888 999999999999999763

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.32  E-value=2.6e-12  Score=110.92  Aligned_cols=99  Identities=15%  Similarity=0.187  Sum_probs=82.3

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhHHHHHHHHhhhCCCCccceeccceE
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRPRSYPSVV  234 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~nlv~l~~g~~  234 (282)
                      .++|...+.||+|+||.||+             +...++..||+|.+.........+.+|+.++.+++||||++++ +++
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~-~~~   74 (269)
T 4hcu_A            9 PSELTFVQEIGSGQFGLVHL-------------GYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLY-GVC   74 (269)
T ss_dssp             GGGEEEEEEEEECSSCEEEE-------------EEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEE-EEE
T ss_pred             hhhceeeheecCCCccEEEE-------------EEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEE-EEE
Confidence            35677789999999999999             8877788999999976544333399999999999999999999 999


Q ss_pred             eeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCc
Q 043820          235 IRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPD  270 (282)
Q Consensus       235 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~  270 (282)
                      .+.+..+ +||||+++|+|.+++....  ..+++..
T Consensus        75 ~~~~~~~-lv~e~~~~~~L~~~l~~~~--~~~~~~~  107 (269)
T 4hcu_A           75 LEQAPIC-LVFEFMEHGCLSDYLRTQR--GLFAAET  107 (269)
T ss_dssp             CSSSSEE-EEEECCTTCBHHHHHHTTT--TCCCHHH
T ss_pred             ecCCceE-EEEEeCCCCcHHHHHHhcC--cccCHHH
Confidence            8888888 9999999999999996543  2344443

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.31  E-value=3.9e-13  Score=119.14  Aligned_cols=110  Identities=16%  Similarity=0.166  Sum_probs=85.1

Q ss_pred             cCHHHHHHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchh--H-HHHHHHHhhhCC
Q 043820          146 FELATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGI--F-FARSVTEVAKIY  222 (282)
Q Consensus       146 ~~~~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~--~-f~~e~~~l~~l~  222 (282)
                      ++..++....++|...+.||+|+||.||+             +.. .+..||+|.+........  + |.+|+.++.+++
T Consensus        27 ~~~~~~~i~~~~y~i~~~lG~G~~g~V~~-------------~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~   92 (309)
T 3p86_A           27 MDGDDMDIPWCDLNIKEKIGAGSFGTVHR-------------AEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLR   92 (309)
T ss_dssp             -----CBCCGGGEEEEEEEEECSSEEEEE-------------EEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCC
T ss_pred             CCcccccCChhHceeeeEeecCCCeEEEE-------------EEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCC
Confidence            33444445567788889999999999999             765 578899999876543333  3 999999999999


Q ss_pred             CCccceeccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          223 ARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       223 H~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      |+||++++ +++...+..+ +||||+++|+|.+++........+++..+
T Consensus        93 hp~iv~~~-~~~~~~~~~~-lv~e~~~~~~L~~~l~~~~~~~~~~~~~~  139 (309)
T 3p86_A           93 HPNIVLFM-GAVTQPPNLS-IVTEYLSRGSLYRLLHKSGAREQLDERRR  139 (309)
T ss_dssp             CTTBCCEE-EEECSTTCCE-EEEECCTTCBHHHHHHSTTHHHHSCHHHH
T ss_pred             CCCEeeEE-EEEEECCceE-EEEecCCCCcHHHHHhhcCCCCCCCHHHH
Confidence            99999999 9998888888 99999999999999976442223555544

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.31  E-value=9.3e-13  Score=122.93  Aligned_cols=99  Identities=17%  Similarity=0.166  Sum_probs=82.8

Q ss_pred             cCHHHHHHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhHHHHHHHHhhhCCCCc
Q 043820          146 FELATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIFFARSVTEVAKIYARS  225 (282)
Q Consensus       146 ~~~~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~n  225 (282)
                      +...+++...++|...+.||+|+||.||+             |...++..||||.+.........|.+|+.+|..++|||
T Consensus       178 ~~~~~~~i~~~~~~~~~~lG~G~fg~V~~-------------~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~  244 (454)
T 1qcf_A          178 WEKDAWEIPRESLKLEKKLGAGQFGEVWM-------------ATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDK  244 (454)
T ss_dssp             CCTTCSBCCGGGEEEEEEEECCSSEEEEE-------------EEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTT
T ss_pred             ccccceeechHHeEEEEEcccCCceEEEE-------------EEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCC
Confidence            33455666778888899999999999999             88877889999999764433223999999999999999


Q ss_pred             cceeccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          226 RPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       226 lv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ||+++ |++. .+..+ +||||+++|+|.++|...
T Consensus       245 iv~l~-~~~~-~~~~~-lv~e~~~~g~L~~~l~~~  276 (454)
T 1qcf_A          245 LVKLH-AVVT-KEPIY-IITEFMAKGSLLDFLKSD  276 (454)
T ss_dssp             BCCEE-EEEC-SSSCE-EEECCCTTCBHHHHHHSH
T ss_pred             EeeEE-EEEe-CCccE-EEEeecCCCcHHHHHHhc
Confidence            99999 9876 55667 999999999999999753

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.30  E-value=1.8e-12  Score=114.82  Aligned_cols=91  Identities=16%  Similarity=0.161  Sum_probs=74.8

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCccceeccc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      ++|...+.||+|+||.||+             +... ++..||+|++...... ..+ +.+|+.+|.+++|||||+++ +
T Consensus         6 ~~y~~~~~lG~G~~g~V~~-------------a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~-~   71 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFE-------------AKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYF-N   71 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEE-------------EEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEE-E
T ss_pred             hcCceeeEecCCCCeEEEE-------------EEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEE-E
Confidence            4577889999999999999             7765 6899999998754333 334 99999999999999999999 9


Q ss_pred             eEeeCCe---------------------------------------------------------EEEEEEecCCCCCccc
Q 043820          233 VVIRPGY---------------------------------------------------------KVGLILELKPDPDPNP  255 (282)
Q Consensus       233 ~~~~~~~---------------------------------------------------------~~~lv~Ey~~~GsL~~  255 (282)
                      ++.+.+.                                                         .+ +||||+++|+|.+
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lv~e~~~~~~L~~  150 (332)
T 3qd2_B           72 AWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLY-IQMQLCRKENLKD  150 (332)
T ss_dssp             EEEECCSCHHHHHHHC--------------------------------------------CCCEEE-EEEECCCSSCHHH
T ss_pred             EEEEeccchhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEE-EEEEecCCCCHHH
Confidence            8865442                                                         55 9999999999999


Q ss_pred             cccCCC
Q 043820          256 DRLHSS  261 (282)
Q Consensus       256 ~l~~~~  261 (282)
                      ++....
T Consensus       151 ~~~~~~  156 (332)
T 3qd2_B          151 WMNRRC  156 (332)
T ss_dssp             HHHTCC
T ss_pred             HHhccc
Confidence            997654

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.30  E-value=9.5e-13  Score=119.85  Aligned_cols=94  Identities=16%  Similarity=0.186  Sum_probs=80.2

Q ss_pred             HHHhccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchh-H-HHHHHHHhhhCCCCccc
Q 043820          151 IANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGI-F-FARSVTEVAKIYARSRP  227 (282)
Q Consensus       151 l~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~-~-f~~e~~~l~~l~H~nlv  227 (282)
                      ++...++|...+.||+|+||.||+             |... ++..||+|.+........ + |.+|+.+|.+++|||||
T Consensus       109 ~~~~~~~~~~~~~lG~G~~g~V~~-------------~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv  175 (377)
T 3cbl_A          109 WVLNHEDLVLGEQIGRGNFGEVFS-------------GRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIV  175 (377)
T ss_dssp             TBCCGGGEEEEEEEEEETTEEEEE-------------EEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBC
T ss_pred             cEEchHHeEEeeEeccCCCCeEEE-------------EEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEE
Confidence            344556788889999999999999             8765 688999999975433333 3 99999999999999999


Q ss_pred             eeccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          228 RSYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       228 ~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +++ |++...+..+ +||||+++|+|.+++..
T Consensus       176 ~~~-~~~~~~~~~~-lv~e~~~~g~L~~~l~~  205 (377)
T 3cbl_A          176 RLI-GVCTQKQPIY-IVMELVQGGDFLTFLRT  205 (377)
T ss_dssp             CEE-EEECSSSSCE-EEEECCTTCBHHHHHHH
T ss_pred             EEE-EEEecCCCcE-EEEEcCCCCCHHHHHHh
Confidence            999 9998888888 99999999999999864

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.30  E-value=1.6e-12  Score=115.76  Aligned_cols=101  Identities=16%  Similarity=0.139  Sum_probs=79.9

Q ss_pred             HHHHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCch-hH-HHHHHHHhhhC-CCCcc
Q 043820          150 TIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTG-IF-FARSVTEVAKI-YARSR  226 (282)
Q Consensus       150 el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l-~H~nl  226 (282)
                      +++...++|...+.||+|+||.||++...+.       +.......||+|.+....... .+ +.+|+.++..+ +||||
T Consensus        40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~-------~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i  112 (333)
T 2i1m_A           40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGL-------GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENI  112 (333)
T ss_dssp             GGBCCTTSEEEEEEEEECSSEEEEEEEETTC-------SSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             cccCCHHHceeeeEeccCCCcceEEEEecCC-------CcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCe
Confidence            4556678899999999999999999322211       111224589999997654333 33 99999999999 89999


Q ss_pred             ceeccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          227 PRSYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       227 v~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ++++ +++...+..+ +||||+++|+|.+++..
T Consensus       113 v~~~-~~~~~~~~~~-lv~e~~~~g~L~~~l~~  143 (333)
T 2i1m_A          113 VNLL-GACTHGGPVL-VITEYCCYGDLLNFLRR  143 (333)
T ss_dssp             CCEE-EEECSSSSCE-EEEECCTTEEHHHHHHH
T ss_pred             eeEE-EEEecCCceE-EEEecCCCCcHHHHHHH
Confidence            9999 9998888888 99999999999999864

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.29  E-value=1.9e-12  Score=120.80  Aligned_cols=96  Identities=18%  Similarity=0.195  Sum_probs=80.6

Q ss_pred             HHHHHHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhHHHHHHHHhhhCCCCccc
Q 043820          148 LATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRP  227 (282)
Q Consensus       148 ~~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~nlv  227 (282)
                      ...++...++|...+.||+|+||.||+             |....+..||||.+.........|.+|+.+|.+++||||+
T Consensus       176 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~-------------~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv  242 (452)
T 1fmk_A          176 KDAWEIPRESLRLEVKLGQGCFGEVWM-------------GTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV  242 (452)
T ss_dssp             TTCSBCCGGGEEEEEEEEECSSCEEEE-------------EEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBC
T ss_pred             ccccccChhHceeeeeecCCCCeEEEE-------------EEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEe
Confidence            344555667788889999999999999             8877778899999976543333399999999999999999


Q ss_pred             eeccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          228 RSYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       228 ~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +++ |++.. +..+ +||||+++|+|.++|..
T Consensus       243 ~~~-~~~~~-~~~~-iv~e~~~~gsL~~~l~~  271 (452)
T 1fmk_A          243 QLY-AVVSE-EPIY-IVTEYMSKGSLLDFLKG  271 (452)
T ss_dssp             CEE-EEECS-SSCE-EEECCCTTCBHHHHHSH
T ss_pred             eEE-EEEcC-CceE-EEehhhcCCCHHHHHHh
Confidence            999 99865 5567 99999999999999964

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.29  E-value=1.7e-12  Score=115.76  Aligned_cols=99  Identities=16%  Similarity=0.117  Sum_probs=79.5

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC----CCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCcccee
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI----DARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~----~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      +.|...+.||+|+||.||+             +...    .+..||+|.+....... .+ |.+|+.++..++|+||+++
T Consensus        49 ~~y~i~~~lG~G~~g~V~~-------------~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~  115 (325)
T 3kul_A           49 SRIHIEKIIGSGDSGEVCY-------------GRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRL  115 (325)
T ss_dssp             GGEEEEEEEEETTTEEEEE-------------EEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             hHeEEeeEEEeCCCcEEEE-------------EEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcE
Confidence            3466678999999999999             7653    34569999997653333 33 9999999999999999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      + +++..++..+ +||||+++|+|.+++....  ..++|..+
T Consensus       116 ~-~~~~~~~~~~-lv~e~~~~~~L~~~l~~~~--~~~~~~~~  153 (325)
T 3kul_A          116 E-GVVTRGRLAM-IVTEYMENGSLDTFLRTHD--GQFTIMQL  153 (325)
T ss_dssp             E-EEECGGGCCE-EEEECCTTCBHHHHHHTTT--TCSCHHHH
T ss_pred             E-EEEEeCCccE-EEeeCCCCCcHHHHHHhcc--cCCCHHHH
Confidence            9 9998888888 9999999999999996543  23555544

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.29  E-value=5.6e-12  Score=110.87  Aligned_cols=90  Identities=11%  Similarity=0.065  Sum_probs=78.3

Q ss_pred             ccCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccc
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      .+.|...+.||+|+||.||+             +.. .++..||+|.+........+ +.+|+.++..++||||++++ +
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~-~   84 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYT-------------AMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYL-D   84 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEE-------------EEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEE-E
T ss_pred             hhceeeeeeeccCCCeEEEE-------------EEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEe-E
Confidence            45688889999999999999             764 46889999998755444455 99999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ++..++..+ +||||+++|+|.+++..
T Consensus        85 ~~~~~~~~~-lv~e~~~~~~L~~~~~~  110 (297)
T 3fxz_A           85 SYLVGDELW-VVMEYLAGGSLTDVVTE  110 (297)
T ss_dssp             EEEETTEEE-EEEECCTTCBHHHHHHH
T ss_pred             EEEECCEEE-EEEECCCCCCHHHHHhh
Confidence            999998888 99999999999998854

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.28  E-value=4.2e-12  Score=115.32  Aligned_cols=90  Identities=16%  Similarity=0.106  Sum_probs=74.7

Q ss_pred             HhccCccccceecccCccceeccccccccccccceeec----CCCcEEEEEEccCCCCchhHHHHHHHHhhhC-CCCccc
Q 043820          153 NATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR----IDARVVAARIVFAGSVTGIFFARSVTEVAKI-YARSRP  227 (282)
Q Consensus       153 ~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~----~~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l-~H~nlv  227 (282)
                      ...+.|...++||+|+||.||+             +..    ..+..||+|.+.... ...++.+|+.+|..+ +|||||
T Consensus        18 ~l~~~Y~i~~~lG~G~fg~Vy~-------------a~~~~~~~~~~~vAiK~i~~~~-~~~~~~~E~~~l~~~~~h~nIv   83 (361)
T 4f9c_A           18 QLSNVFKIEDKIGEGTFSSVYL-------------ATAQLQVGPEEKIALKHLIPTS-HPIRIAAELQCLTVAGGQDNVM   83 (361)
T ss_dssp             GGGGTCEEEEEEEECSSEEEEE-------------EEEEBTTSCEEEEEEEEECTTS-CHHHHHHHHHHHHHTCSBTTBC
T ss_pred             CccCcEEEEEEEecccCcEEEE-------------EEEcccCCCCCEEEEEEEcccc-CHHHHHHHHHHHHHhcCCCCCc
Confidence            3457799999999999999999             642    246789999886432 222288999999998 799999


Q ss_pred             eeccceEeeCCeEEEEEEecCCCCCcccccc
Q 043820          228 RSYPSVVIRPGYKVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       228 ~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~  258 (282)
                      +++ ++..+.+..+ +||||+++|+|.+++.
T Consensus        84 ~l~-~~~~~~~~~~-lvmE~~~g~~L~~~~~  112 (361)
T 4f9c_A           84 GVK-YCFRKNDHVV-IAMPYLEHESFLDILN  112 (361)
T ss_dssp             CCS-EEEEETTEEE-EEEECCCCCCHHHHHT
T ss_pred             eEE-EEEEECCEEE-EEEeCCCcccHHHHHc
Confidence            999 9998888888 9999999999999884

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.27  E-value=5.4e-12  Score=108.71  Aligned_cols=90  Identities=18%  Similarity=0.168  Sum_probs=78.5

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhHHHHHHHHhhhCCCCccceeccceE
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRPRSYPSVV  234 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~nlv~l~~g~~  234 (282)
                      .++|...+.||+|+||.||+             +...++..||+|.+.........+.+|+.++.+++||||++++ +++
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~-~~~   72 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKL-------------GKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFY-GVC   72 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEE-------------EEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEE-EEE
T ss_pred             hhheeeeeeeccCCCceEEE-------------EEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEE-EEE
Confidence            45677889999999999999             8877778899999976544433399999999999999999999 999


Q ss_pred             eeCCeEEEEEEecCCCCCccccccC
Q 043820          235 IRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       235 ~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ......+ +||||+++|+|.+++..
T Consensus        73 ~~~~~~~-lv~e~~~~~~L~~~l~~   96 (268)
T 3sxs_A           73 SKEYPIY-IVTEYISNGCLLNYLRS   96 (268)
T ss_dssp             CSSSSEE-EEEECCTTCBHHHHHHH
T ss_pred             ccCCceE-EEEEccCCCcHHHHHHH
Confidence            8888888 99999999999999864

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.27  E-value=2e-12  Score=111.25  Aligned_cols=100  Identities=11%  Similarity=0.085  Sum_probs=80.4

Q ss_pred             cCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCch--hH-HHHHHHHhhhCCCCccceeccc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTG--IF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      ++|...+.||+|+||.||+             +.. ++..||+|.+.......  .+ |.+|+.++.+++||||++++ +
T Consensus        10 ~~y~~~~~lg~G~~g~V~~-------------~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~-~   74 (271)
T 3kmu_A           10 KQLNFLTKLNENHSGELWK-------------GRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVL-G   74 (271)
T ss_dssp             GGCEEEEEEEEETTEEEEE-------------EEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEE-E
T ss_pred             HHhHHHHHhcCCCcceEEE-------------EEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheE-E
Confidence            4577779999999999999             876 47889999997543322  33 99999999999999999999 9


Q ss_pred             eEeeC--CeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          233 VVIRP--GYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       233 ~~~~~--~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      ++...  +..+ +||||+++|+|.+++.... ...++|..+.
T Consensus        75 ~~~~~~~~~~~-lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~  114 (271)
T 3kmu_A           75 ACQSPPAPHPT-LITHWMPYGSLYNVLHEGT-NFVVDQSQAV  114 (271)
T ss_dssp             EECTTTSSSCE-EEEECCTTCBHHHHHHSCS-SCCCCHHHHH
T ss_pred             EEccCCCCCeE-eeecccCCCcHHHHHhhcc-cCCCCHHHHH
Confidence            98876  5667 9999999999999997644 2245665443

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.27  E-value=3.3e-12  Score=115.92  Aligned_cols=97  Identities=20%  Similarity=0.239  Sum_probs=75.9

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchh-H-HHHHHHHhhhCCCCccceeccc
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGI-F-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~-~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      .++|...+.||+|+||.||++...+.       .....+..||+|.+........ . +.+|+.++.+++|+|||+++ +
T Consensus        70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~-------~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~-~  141 (367)
T 3l9p_A           70 RKNITLIRGLGHGAFGEVYEGQVSGM-------PNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCI-G  141 (367)
T ss_dssp             GGGEEEEEECCCCSSSCEEEEEECC------------CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEE-E
T ss_pred             HhHeEEeeEeeeCCCEEEEEEEEccC-------CCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEE-E
Confidence            35677889999999999999321111       1122467899999975433333 3 99999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ++......+ +||||+++|+|.+++...
T Consensus       142 ~~~~~~~~~-lv~e~~~~g~L~~~l~~~  168 (367)
T 3l9p_A          142 VSLQSLPRF-ILLELMAGGDLKSFLRET  168 (367)
T ss_dssp             EECSSSSCE-EEEECCTTEEHHHHHHHH
T ss_pred             EEecCCCCE-EEEEeCCCCCHHHHHHhh
Confidence            998888888 999999999999999753

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.26  E-value=2.7e-12  Score=111.55  Aligned_cols=93  Identities=17%  Similarity=0.159  Sum_probs=77.4

Q ss_pred             HHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhHHHHHHHHhhhCCCCccceecc
Q 043820          152 ANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       152 ~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      ....++|...+.||+|+||.||+             +...++..||+|.+.........+.+|+.++..++|+||++++ 
T Consensus        20 ~~~~~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~-   85 (283)
T 3gen_A           20 EIDPKDLTFLKELGTGQFGVVKY-------------GKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLY-   85 (283)
T ss_dssp             BCCGGGEEEEEECC---CEEEEE-------------EEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEE-
T ss_pred             cCCHHHHHhHhhcCCCCCceEEE-------------EEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEE-
Confidence            33456788889999999999999             8877788999999976544333399999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +++...+..+ +||||+++|+|.+++..
T Consensus        86 ~~~~~~~~~~-lv~e~~~~~~L~~~l~~  112 (283)
T 3gen_A           86 GVCTKQRPIF-IITEYMANGCLLNYLRE  112 (283)
T ss_dssp             EEECSSSSEE-EEECCCTTCBHHHHHHC
T ss_pred             EEEecCCCeE-EEEeccCCCcHHHHHHH
Confidence            9998888888 99999999999999975

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.26  E-value=9.6e-12  Score=110.82  Aligned_cols=90  Identities=16%  Similarity=0.158  Sum_probs=75.6

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCccceeccc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      ++|...+.||+|+||.||+             +... ++..||+|.+....... .+ +.+|+.++..++|+||++++ +
T Consensus         7 ~~y~i~~~lG~G~~g~V~~-------------~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~-~   72 (323)
T 3tki_A            7 EDWDLVQTLGEGAYGEVQL-------------AVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY-G   72 (323)
T ss_dssp             TCEEEEEEEEEETTEEEEE-------------EEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEE-E
T ss_pred             hhceeeeEEecCCCEEEEE-------------EEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEE-E
Confidence            5688889999999999999             7654 68899999986543332 34 99999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ++..++..+ +||||+++|+|.+++...
T Consensus        73 ~~~~~~~~~-lv~e~~~~~~L~~~l~~~   99 (323)
T 3tki_A           73 HRREGNIQY-LFLEYCSGGELFDRIEPD   99 (323)
T ss_dssp             EEECSSEEE-EEEECCTTEEGGGGSBTT
T ss_pred             EEecCCeEE-EEEEcCCCCcHHHHHhhc
Confidence            999888888 999999999999999654

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.26  E-value=3.7e-12  Score=113.63  Aligned_cols=96  Identities=18%  Similarity=0.198  Sum_probs=80.4

Q ss_pred             HHHHhccCccccceecccCccceeccccccccccccceeecC------CCcEEEEEEccCCCCch-hH-HHHHHHHhhhC
Q 043820          150 TIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI------DARVVAARIVFAGSVTG-IF-FARSVTEVAKI  221 (282)
Q Consensus       150 el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~------~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l  221 (282)
                      ++....++|...+.||+|+||.||+             +...      ++..||+|.+....... .+ |.+|+.++..+
T Consensus        41 ~~~~~~~~~~~~~~lg~G~~g~Vy~-------------~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l  107 (343)
T 1luf_A           41 SLEYPRNNIEYVRDIGEGAFGRVFQ-------------ARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF  107 (343)
T ss_dssp             HTBCCGGGCEEEEEEEECSSCEEEE-------------EEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTC
T ss_pred             eeEecHHHCeeeeeeeecCCeeEEE-------------EEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhC
Confidence            3445667888899999999999999             5542      35789999997654333 33 99999999999


Q ss_pred             CCCccceeccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          222 YARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       222 ~H~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +|+||++++ +++...+..+ +||||+++|+|.++|...
T Consensus       108 ~hp~iv~~~-~~~~~~~~~~-lv~e~~~~~~L~~~l~~~  144 (343)
T 1luf_A          108 DNPNIVKLL-GVCAVGKPMC-LLFEYMAYGDLNEFLRSM  144 (343)
T ss_dssp             CCTTBCCEE-EEECSSSSCE-EEEECCTTCBHHHHHHHT
T ss_pred             CCCCEEEEE-EEEccCCceE-EEEecCCCCcHHHHHHHh
Confidence            999999999 9998888888 999999999999999753

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.26  E-value=7.8e-12  Score=111.88  Aligned_cols=91  Identities=16%  Similarity=0.220  Sum_probs=77.8

Q ss_pred             hccCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCc--hhH-HHHHHHHhhhCCCCcccee
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVT--GIF-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~--~~~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      ..++|...+.||+|+||.||+             +.. .++..||+|.+......  ..+ +.+|+.+|..++||||+++
T Consensus        13 ~~~~y~~~~~lG~G~~g~V~~-------------a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l   79 (328)
T 3fe3_A           13 HIGNYRLLKTIGKGNFAKVKL-------------ARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL   79 (328)
T ss_dssp             EETTEEEEEEEEECSSEEEEE-------------EEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ccCCEEEEEEEeeCCCEEEEE-------------EEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeE
Confidence            356788889999999999999             765 46899999998654322  233 8999999999999999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      + +++...+..+ +||||+++|+|.+++..
T Consensus        80 ~-~~~~~~~~~~-lv~e~~~~~~L~~~l~~  107 (328)
T 3fe3_A           80 F-EVIETEKTLY-LIMEYASGGEVFDYLVA  107 (328)
T ss_dssp             E-EEEECSSEEE-EEECCCTTCBHHHHHHH
T ss_pred             E-EEEEECCEEE-EEEECCCCCcHHHHHHH
Confidence            9 9998888888 99999999999998854

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.25  E-value=3e-12  Score=122.00  Aligned_cols=96  Identities=18%  Similarity=0.195  Sum_probs=80.6

Q ss_pred             HHHHHHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhHHHHHHHHhhhCCCCccc
Q 043820          148 LATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRP  227 (282)
Q Consensus       148 ~~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~nlv  227 (282)
                      ...++...++|...+.||+|+||.||+             +....+..||||.+.........|.+|+.+|.+++|+|||
T Consensus       259 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~-------------~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv  325 (535)
T 2h8h_A          259 KDAWEIPRESLRLEVKLGQGCFGEVWM-------------GTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV  325 (535)
T ss_dssp             TTCSBCCGGGEEEEEEEEECSSEEEEE-------------EEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBC
T ss_pred             ccceecchhhhhhheecccCCCeEEEE-------------EEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEe
Confidence            344555667788889999999999999             8887778899999976543333399999999999999999


Q ss_pred             eeccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          228 RSYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       228 ~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +++ |++.. +..+ |||||+++|+|.++|..
T Consensus       326 ~~~-~~~~~-~~~~-lv~e~~~~gsL~~~l~~  354 (535)
T 2h8h_A          326 QLY-AVVSE-EPIY-IVTEYMSKGSLLDFLKG  354 (535)
T ss_dssp             CEE-EEECS-SSCE-EEECCCTTEEHHHHHSH
T ss_pred             eEE-EEEee-ccce-EeeehhcCCcHHHHHhh
Confidence            999 99865 5567 99999999999999964

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.25  E-value=1e-11  Score=108.90  Aligned_cols=89  Identities=12%  Similarity=-0.018  Sum_probs=76.9

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch---hH-HHHHHHHhhhCCCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG---IF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~---~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      +.|...+.||+|+||.||+             +... .+..||+|.+.......   .+ |.+|+..+..++|+||++++
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~-------------a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~   97 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQ-------------ALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVL   97 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEE-------------EEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred             CcEEEEEEEcccCCeEEEE-------------EEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceee
Confidence            4688889999999999999             7765 48899999997654332   23 99999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                       +++...+..+ +||||+++|+|.+++..
T Consensus        98 -~~~~~~~~~~-lv~e~~~g~~L~~~l~~  124 (286)
T 3uqc_A           98 -DVVHTRAGGL-VVAEWIRGGSLQEVADT  124 (286)
T ss_dssp             -EEEEETTEEE-EEEECCCEEEHHHHHTT
T ss_pred             -EEEEECCcEE-EEEEecCCCCHHHHHhc
Confidence             9999888888 99999999999999853

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.24  E-value=6.3e-12  Score=114.23  Aligned_cols=100  Identities=18%  Similarity=0.206  Sum_probs=77.4

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCch-hH-HHHHHHHhhhC-CCCccceec
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTG-IF-FARSVTEVAKI-YARSRPRSY  230 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l-~H~nlv~l~  230 (282)
                      ..++|...+.||+|+||.||++...+...     .....+..||+|.+....... .+ +.+|+.+|..+ +||||++++
T Consensus        79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~-----~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~  153 (370)
T 2psq_A           79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDK-----DKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLL  153 (370)
T ss_dssp             CGGGEEEEEEESCCSSSEEEEEEEETCST-----TCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEE
T ss_pred             cHHHCEeeeEEeeCCCeeEEEEEEecccC-----cCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEE
Confidence            34678888999999999999932211100     011235689999997654333 23 99999999999 899999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                       |++...+..+ +||||+++|+|.++|...
T Consensus       154 -~~~~~~~~~~-lv~e~~~~g~L~~~l~~~  181 (370)
T 2psq_A          154 -GACTQDGPLY-VIVEYASKGNLREYLRAR  181 (370)
T ss_dssp             -EEECSSSSCE-EEEECCTTCBHHHHHHHT
T ss_pred             -EEEccCCCEE-EEEEcCCCCCHHHHHHhh
Confidence             9998888888 999999999999999754

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.24  E-value=4e-12  Score=112.64  Aligned_cols=101  Identities=17%  Similarity=0.191  Sum_probs=79.9

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC-chhH-HHHHHHHhhhCCCCccceeccc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV-TGIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~-~~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      +.|...+.||+|+||.||+             +... ++..||+|.+..... ...+ +.+|+.++.+++|+||++++ +
T Consensus         9 ~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~-~   74 (319)
T 4euu_A            9 HLWLLSDILGQGATANVFR-------------GRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF-A   74 (319)
T ss_dssp             EEEEEEEEEEECSSEEEEE-------------EEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEE-E
T ss_pred             CCEEEEEEecCCCCeEEEE-------------EEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEE-E
Confidence            4577889999999999999             7755 488999999975432 2234 89999999999999999999 9


Q ss_pred             eEeeCC--eEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          233 VVIRPG--YKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       233 ~~~~~~--~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      ++....  ..+ +||||+++|+|.+++........+++...
T Consensus        75 ~~~~~~~~~~~-lv~e~~~~~~L~~~l~~~~~~~~~~~~~~  114 (319)
T 4euu_A           75 IEEETTTRHKV-LIMEFCPCGSLYTVLEEPSNAYGLPESEF  114 (319)
T ss_dssp             EEECTTTCCEE-EEEECCTTCBHHHHHHSGGGTTCCCHHHH
T ss_pred             EeecCCCceEE-EEEeCCCCCCHHHHHHHhccccCCCHHHH
Confidence            887655  556 99999999999999976443223555443

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.24  E-value=4.1e-12  Score=112.44  Aligned_cols=107  Identities=21%  Similarity=0.252  Sum_probs=84.4

Q ss_pred             CccCHHHHHHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchh-H-HHHHHHHhhhC
Q 043820          144 PLFELATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGI-F-FARSVTEVAKI  221 (282)
Q Consensus       144 ~~~~~~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~-~-f~~e~~~l~~l  221 (282)
                      ..+..++++...++|...+.||+|+||.||++...+.       .....+..||+|.+........ . |.+|+.++..+
T Consensus        13 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~-------~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l   85 (322)
T 1p4o_A           13 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGV-------VKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF   85 (322)
T ss_dssp             SCCCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEE-------ETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGC
T ss_pred             cccChhhhcchhhheeeeeEeccCCceEEEeeeecCc-------cCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhc
Confidence            3455567777788899999999999999999322210       0011367899999975443333 3 99999999999


Q ss_pred             CCCccceeccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          222 YARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       222 ~H~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +|+||++++ +++..++..+ +||||+++|+|.+++..
T Consensus        86 ~h~~i~~~~-~~~~~~~~~~-lv~e~~~~~~L~~~l~~  121 (322)
T 1p4o_A           86 NCHHVVRLL-GVVSQGQPTL-VIMELMTRGDLKSYLRS  121 (322)
T ss_dssp             CCTTBCCEE-EEECSSSSCE-EEEECCTTCBHHHHHHH
T ss_pred             CCCCEeeeE-EEEccCCccE-EEEEeCCCCcHHHHHHH
Confidence            999999999 9998888888 99999999999999864

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.24  E-value=3.7e-12  Score=118.73  Aligned_cols=90  Identities=12%  Similarity=0.135  Sum_probs=76.6

Q ss_pred             HhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceecc
Q 043820          153 NATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       153 ~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      ...++|...+.||+|+||.||+             |... +..||||.++...  ..+ |.+|+.+|.+++|+|||+++ 
T Consensus       190 i~~~~~~~~~~lG~G~fg~V~~-------------~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~-  252 (450)
T 1k9a_A          190 LNMKELKLLQTIGKGEFGDVML-------------GDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLL-  252 (450)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEE-------------EEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEE-
T ss_pred             cChHHeEEEeeecCcCCeeEEE-------------EEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEE-
Confidence            3456778889999999999999             8764 6799999997543  334 99999999999999999999 


Q ss_pred             ceEeeCC-eEEEEEEecCCCCCccccccCC
Q 043820          232 SVVIRPG-YKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       232 g~~~~~~-~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      |++...+ ..+ +||||+++|+|.++|...
T Consensus       253 ~~~~~~~~~~~-iv~e~~~~g~L~~~l~~~  281 (450)
T 1k9a_A          253 GVIVEEKGGLY-IVTEYMAKGSLVDYLRSR  281 (450)
T ss_dssp             EEEECTTSCEE-EEEECCTTCBHHHHHHHH
T ss_pred             EEEEcCCCceE-EEEEecCCCcHHHHHHhc
Confidence            9988766 566 999999999999999754

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.23  E-value=8.2e-12  Score=111.52  Aligned_cols=94  Identities=16%  Similarity=0.222  Sum_probs=78.8

Q ss_pred             HHHHhccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCC-----CCchhH-HHHHHHHhhhCC
Q 043820          150 TIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAG-----SVTGIF-FARSVTEVAKIY  222 (282)
Q Consensus       150 el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~-----~~~~~~-f~~e~~~l~~l~  222 (282)
                      ++....++|...+.||+|+||.||+             +... ++..||+|.+...     .....+ +.+|+.++..++
T Consensus        20 ~~~~~~~~y~~~~~lG~G~~g~V~~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   86 (345)
T 3hko_A           20 SLLELQKKYHLKGAIGQGSYGVVRV-------------AIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLH   86 (345)
T ss_dssp             CHHHHHHHEEEEEEEEECSSCEEEE-------------EEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCC
T ss_pred             hhhhhhhheeecceeeecCCeEEEE-------------EEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCC
Confidence            3455566788899999999999999             7654 5789999988643     223334 999999999999


Q ss_pred             CCccceeccceEeeCCeEEEEEEecCCCCCcccccc
Q 043820          223 ARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       223 H~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~  258 (282)
                      ||||++++ +++.+.+..+ +||||+++|+|.+++.
T Consensus        87 hpniv~~~-~~~~~~~~~~-lv~e~~~gg~L~~~l~  120 (345)
T 3hko_A           87 HPNIARLY-EVYEDEQYIC-LVMELCHGGHLLDKLN  120 (345)
T ss_dssp             CTTBCCEE-EEEECSSEEE-EEEECCCSCBHHHHEE
T ss_pred             CCCcceee-hhhccCCeEE-EEEeCCCCCcHHHHHH
Confidence            99999999 9998888888 9999999999999985

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.23  E-value=3.1e-12  Score=118.10  Aligned_cols=97  Identities=13%  Similarity=0.145  Sum_probs=81.3

Q ss_pred             HHHHHHhccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhCC
Q 043820          148 LATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKIY  222 (282)
Q Consensus       148 ~~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~  222 (282)
                      +.++....++|...+.||+|+||.||+             +... .+..||+|.+....   ....+ +.+|+.++..++
T Consensus        61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~-------------~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~  127 (410)
T 3v8s_A           61 IRDLRMKAEDYEVVKVIGRGAFGEVQL-------------VRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN  127 (410)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSEEEEE-------------EEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCC
T ss_pred             HHhcccCccccEEEEEEEcCCCEEEEE-------------EEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCC
Confidence            345566778899999999999999999             7655 57899999986421   12223 899999999999


Q ss_pred             CCccceeccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          223 ARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       223 H~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      |||||+++ +++.+....+ +||||+++|+|.+++..
T Consensus       128 hp~Iv~l~-~~~~~~~~~~-lV~E~~~gg~L~~~l~~  162 (410)
T 3v8s_A          128 SPWVVQLF-YAFQDDRYLY-MVMEYMPGGDLVNLMSN  162 (410)
T ss_dssp             CTTBCCEE-EEEECSSEEE-EEECCCTTEEHHHHHHH
T ss_pred             CCCCCeEE-EEEEECCEEE-EEEeCCCCCcHHHHHHc
Confidence            99999999 9999888888 99999999999998864

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.23  E-value=4.3e-12  Score=117.22  Aligned_cols=99  Identities=17%  Similarity=0.117  Sum_probs=83.3

Q ss_pred             cCHHHHHHhccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC---chhH-HHHHHHHhhh
Q 043820          146 FELATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV---TGIF-FARSVTEVAK  220 (282)
Q Consensus       146 ~~~~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~---~~~~-f~~e~~~l~~  220 (282)
                      +.+.++....++|...+.||+|+||.||+             +... ++..||+|.+.....   ...+ +.+|..++..
T Consensus        51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~-------------~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~  117 (412)
T 2vd5_A           51 VRLKEVRLQRDDFEILKVIGRGAFSEVAV-------------VKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVN  117 (412)
T ss_dssp             HHHHHHSCCGGGEEEEEEEEECSSCEEEE-------------EEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHH
T ss_pred             hhhhhccCChhhEEEEEEEeeCCCeEEEE-------------EEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHh
Confidence            44556666788999999999999999999             7754 589999999964221   1223 9999999999


Q ss_pred             CCCCccceeccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          221 IYARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       221 l~H~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ++|+||++++ +++.+.+..+ |||||+++|+|.++|..
T Consensus       118 ~~hp~Iv~l~-~~~~~~~~~~-lVmE~~~gg~L~~~l~~  154 (412)
T 2vd5_A          118 GDRRWITQLH-FAFQDENYLY-LVMEYYVGGDLLTLLSK  154 (412)
T ss_dssp             SCTTTBCCEE-EEEECSSEEE-EEECCCCSCBHHHHHHH
T ss_pred             cCCCCeeeEE-EEEeeCCEEE-EEEcCCCCCcHHHHHHh
Confidence            9999999999 9998888888 99999999999999964

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.23  E-value=1.8e-11  Score=111.01  Aligned_cols=91  Identities=21%  Similarity=0.133  Sum_probs=77.4

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc------hhH-HHHHHHHhhhCCCCcc
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT------GIF-FARSVTEVAKIYARSR  226 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~------~~~-f~~e~~~l~~l~H~nl  226 (282)
                      .+.|...+.||+|+||.||+             +... +|..||+|.+......      ..+ +.+|+.+|..++||||
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~-------------~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnI   77 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKK-------------CREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNI   77 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEE-------------EEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTB
T ss_pred             hhceEEeeEEeeCcCEEEEE-------------EEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCC
Confidence            45688889999999999999             7654 5889999998754322      234 9999999999999999


Q ss_pred             ceeccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          227 PRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       227 v~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ++++ +++......+ +||||+++|+|.++|...
T Consensus        78 v~l~-~~~~~~~~~~-lv~e~~~gg~L~~~l~~~  109 (361)
T 2yab_A           78 ITLH-DVYENRTDVV-LILELVSGGELFDFLAQK  109 (361)
T ss_dssp             CCEE-EEEECSSEEE-EEEECCCSCBHHHHHTTC
T ss_pred             CcEE-EEEEeCCEEE-EEEEcCCCCcHHHHHHhc
Confidence            9999 9998888888 999999999999999653

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.23  E-value=4.8e-12  Score=122.85  Aligned_cols=89  Identities=19%  Similarity=0.209  Sum_probs=72.1

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHH---HHHhhhCCCCccc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARS---VTEVAKIYARSRP  227 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e---~~~l~~l~H~nlv  227 (282)
                      ++|...+.||+|+||.||+             +... .|..||+|.+....   ..... ..+|   +.++..++|||||
T Consensus       189 ddf~i~k~LG~G~fG~V~l-------------a~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV  255 (689)
T 3v5w_A          189 NDFSVHRIIGRGGFGEVYG-------------CRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV  255 (689)
T ss_dssp             GGEEEEEEEEECSSEEEEE-------------EEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBC
T ss_pred             HHeEEEEEEecccCeEEEE-------------EEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEe
Confidence            5688889999999999999             7654 58999999996432   12222 4444   6677788999999


Q ss_pred             eeccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          228 RSYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       228 ~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +++ ++..+.+..+ |||||+++|+|.++|..
T Consensus       256 ~l~-~~f~~~~~ly-lVmEy~~GGdL~~~l~~  285 (689)
T 3v5w_A          256 CMS-YAFHTPDKLS-FILDLMNGGDLHYHLSQ  285 (689)
T ss_dssp             CEE-EEEECSSEEE-EEECCCCSCBHHHHHHH
T ss_pred             EEE-EEEEECCEEE-EEEecCCCCcHHHHHHh
Confidence            999 9988888888 99999999999999864

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.22  E-value=1.6e-11  Score=109.35  Aligned_cols=90  Identities=18%  Similarity=0.158  Sum_probs=77.2

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccc
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      .++|...+.||+|+||.||+             +... ++..+|+|.+.... .... +.+|+.++..++||||++++ +
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~-------------~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~-~   68 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHR-------------CVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLH-E   68 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEE-------------EEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEE-E
T ss_pred             hhceEeeeEEecCCCeEEEE-------------EEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEe-E
Confidence            35678889999999999999             7654 57899999986432 2334 99999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ++.+.+..+ +||||+++|+|.+++...
T Consensus        69 ~~~~~~~~~-lv~e~~~g~~L~~~l~~~   95 (321)
T 1tki_A           69 SFESMEELV-MIFEFISGLDIFERINTS   95 (321)
T ss_dssp             EEEETTEEE-EEECCCCCCBHHHHHTSS
T ss_pred             EEecCCEEE-EEEEeCCCCCHHHHHHhc
Confidence            999888888 999999999999999653

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.22  E-value=4.4e-12  Score=110.33  Aligned_cols=105  Identities=15%  Similarity=0.153  Sum_probs=84.5

Q ss_pred             HHHHhccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccc
Q 043820          150 TIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRP  227 (282)
Q Consensus       150 el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv  227 (282)
                      +++...++|...+.||+|+||.||+             +... .+..||+|.+..... ..+ |.+|+.++..++|+||+
T Consensus         7 ~~~~~~~~~~~~~~lg~G~~g~V~~-------------~~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~   72 (288)
T 3kfa_A            7 KWEMERTDITMKHKLGGGQYGEVYE-------------GVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLV   72 (288)
T ss_dssp             TTBCCGGGEEEEEESGGGTTCSEEE-------------EEEGGGTEEEEEEEECSCST-HHHHHHHHHHHHHHCCCTTBC
T ss_pred             cccccccceeEEeecCCCCceeEEE-------------eEecCCCEEEEEEecCcCHH-HHHHHHHHHHHHHhCCCCCEe
Confidence            4444567788889999999999999             7765 478999999975433 334 99999999999999999


Q ss_pred             eeccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          228 RSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       228 ~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      +++ +++...+..+ +||||+++|+|.+++.... ...+++..+
T Consensus        73 ~~~-~~~~~~~~~~-~v~e~~~~~~L~~~~~~~~-~~~~~~~~~  113 (288)
T 3kfa_A           73 QLL-GVCTREPPFY-IITEFMTYGNLLDYLRECN-RQEVSAVVL  113 (288)
T ss_dssp             CEE-EEECSSSSEE-EEEECCTTEEHHHHHHHCC-TTTSCHHHH
T ss_pred             eEE-EEEccCCCEE-EEEEcCCCCcHHHHHHhcc-cCCccHhHH
Confidence            999 9998888888 9999999999999996533 223555443

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.22  E-value=1.9e-11  Score=110.69  Aligned_cols=90  Identities=16%  Similarity=0.225  Sum_probs=77.4

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhHHHHHHHHhhhCCCCccceeccce
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      .+.|...+.||+|+||.||+             +... .+..||+|.+.........+.+|+.++..++||||++++ ++
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~-------------~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~-~~   84 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARL-------------MRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFK-EV   84 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEE-------------EEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEE-EE
T ss_pred             CCcEEEEEEeccCCCEEEEE-------------EEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEE-EE
Confidence            45688889999999999999             7654 588999999975443333399999999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccC
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +......+ +||||+++|+|.+++..
T Consensus        85 ~~~~~~~~-lv~e~~~~~~L~~~l~~  109 (361)
T 3uc3_A           85 ILTPTHLA-IIMEYASGGELYERICN  109 (361)
T ss_dssp             EECSSEEE-EEEECCCSCBHHHHHHH
T ss_pred             EeeCCEEE-EEEEeCCCCCHHHHHHh
Confidence            99888888 99999999999998854

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.22  E-value=1.4e-11  Score=111.59  Aligned_cols=91  Identities=18%  Similarity=0.288  Sum_probs=77.7

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch--hH-HHHHHHHhhhCCCCccceec
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG--IF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      .++|...+.||+|+||.||+             +... ++..||+|.+.......  .+ +.+|+.++..++|||||+++
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~-------------~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~   94 (362)
T 2bdw_A           28 SDNYDVKEELGKGAFSVVRR-------------CVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH   94 (362)
T ss_dssp             HHHEEEEEEEEEETTEEEEE-------------EEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             ccCeEEeeEEecCCCeEEEE-------------EEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence            35688889999999999999             7654 58899999997543332  23 99999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                       +++.+.+..+ +||||+++|+|.+++...
T Consensus        95 -~~~~~~~~~~-lv~e~~~gg~L~~~l~~~  122 (362)
T 2bdw_A           95 -DSIQEESFHY-LVFDLVTGGELFEDIVAR  122 (362)
T ss_dssp             -EEEECSSEEE-EEECCCCSCBHHHHHTTC
T ss_pred             -EEEEeCCEEE-EEEecCCCCCHHHHHHHc
Confidence             9999888888 999999999999988654

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.22  E-value=5.9e-12  Score=110.78  Aligned_cols=95  Identities=18%  Similarity=0.186  Sum_probs=78.8

Q ss_pred             HHHhccCccccceecccCccceeccccccccccccceeec------CCCcEEEEEEccCCCCchh-H-HHHHHHHhhhCC
Q 043820          151 IANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR------IDARVVAARIVFAGSVTGI-F-FARSVTEVAKIY  222 (282)
Q Consensus       151 l~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~------~~~~~vAvK~l~~~~~~~~-~-f~~e~~~l~~l~  222 (282)
                      +....++|...+.||+|+||.||+             +..      .++..||+|.+........ + +.+|+.++..++
T Consensus        18 ~~~~~~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~   84 (314)
T 2ivs_A           18 WEFPRKNLVLGKTLGEGEFGKVVK-------------ATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN   84 (314)
T ss_dssp             TBCCGGGEEEEEEEEECSSSEEEE-------------EEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCC
T ss_pred             cccchhheeeeeeecccCCeeEEE-------------EEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCC
Confidence            334556788889999999999999             543      2457899999975443332 3 999999999999


Q ss_pred             CCccceeccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          223 ARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       223 H~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ||||++++ +++...+..+ +||||+++|+|.+++...
T Consensus        85 hp~iv~~~-~~~~~~~~~~-lv~e~~~~~~L~~~l~~~  120 (314)
T 2ivs_A           85 HPHVIKLY-GACSQDGPLL-LIVEYAKYGSLRGFLRES  120 (314)
T ss_dssp             CTTBCCEE-EEECSSSSCE-EEEECCTTCBHHHHHHHT
T ss_pred             CCceeeEE-EEEecCCceE-EEEeecCCCCHHHHHHHH
Confidence            99999999 9998888888 999999999999999753

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.22  E-value=9.9e-12  Score=107.70  Aligned_cols=94  Identities=19%  Similarity=0.198  Sum_probs=77.9

Q ss_pred             HHHHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhHHHHHHHHhhhCCCCcccee
Q 043820          150 TIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       150 el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~nlv~l  229 (282)
                      +++...++|...+.||+|+||.||+             +...++..||+|.+.........|.+|+.++..++|+||+++
T Consensus         7 ~~~v~~~~y~~~~~lg~G~~g~Vy~-------------~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~   73 (279)
T 1qpc_A            7 EWEVPRETLKLVERLGAGQFGEVWM-------------GYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL   73 (279)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEE-------------EEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             hcccCHHhhhheeeecCCCCeEEEE-------------EEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceE
Confidence            3444556788889999999999999             887777899999997544333239999999999999999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      + +++. .+..+ +||||+++|+|.+++..
T Consensus        74 ~-~~~~-~~~~~-~v~e~~~~~~L~~~l~~  100 (279)
T 1qpc_A           74 Y-AVVT-QEPIY-IITEYMENGSLVDFLKT  100 (279)
T ss_dssp             E-EEEC-SSSCE-EEEECCTTCBHHHHTTS
T ss_pred             E-EEEc-CCCcE-EEEecCCCCCHHHHHhc
Confidence            9 9876 44566 99999999999999864

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.21  E-value=2e-11  Score=111.75  Aligned_cols=91  Identities=18%  Similarity=0.171  Sum_probs=78.6

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccc
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      .+.|...+.||+|+||.||+             +... ++..||+|.+......... +.+|+.+|..++|+||++++ +
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~-------------~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~-~  115 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHR-------------CVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLH-D  115 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEE-------------EEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEE-E
T ss_pred             ccceEEEEEEecCCCEEEEE-------------EEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEE-E
Confidence            35688889999999999999             7654 5889999998765444444 99999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ++......+ +||||+++|+|.+++...
T Consensus       116 ~~~~~~~~~-lv~E~~~gg~L~~~l~~~  142 (387)
T 1kob_A          116 AFEDKYEMV-LILEFLSGGELFDRIAAE  142 (387)
T ss_dssp             EEECSSEEE-EEEECCCCCBHHHHTTCT
T ss_pred             EEEeCCEEE-EEEEcCCCCcHHHHHHhh
Confidence            998888888 999999999999998754

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.21  E-value=1.3e-11  Score=105.98  Aligned_cols=91  Identities=16%  Similarity=0.206  Sum_probs=78.7

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhHHHHHHHHhhhCCCCccceeccceE
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRPRSYPSVV  234 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~nlv~l~~g~~  234 (282)
                      .++|...+.||+|+||.||+             +...++..||+|.+.........+.+|+.++..++||||++++ +++
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~-~~~   72 (267)
T 3t9t_A            7 PSELTFVQEIGSGQFGLVHL-------------GYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLY-GVC   72 (267)
T ss_dssp             GGGEEEEEEEEEETTEEEEE-------------EEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEE-EEE
T ss_pred             hhheeeeeEecCCCceeEEE-------------EEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEE-EEE
Confidence            35677789999999999999             8877788999999976544333399999999999999999999 999


Q ss_pred             eeCCeEEEEEEecCCCCCccccccCC
Q 043820          235 IRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       235 ~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ...+..+ +||||+++|+|.+++...
T Consensus        73 ~~~~~~~-lv~e~~~~~~L~~~~~~~   97 (267)
T 3t9t_A           73 LEQAPIC-LVTEFMEHGCLSDYLRTQ   97 (267)
T ss_dssp             CSSSSCE-EEECCCTTCBHHHHHHHT
T ss_pred             ccCCCeE-EEEeCCCCCcHHHHHhhC
Confidence            8888888 999999999999999654

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.21  E-value=2.2e-11  Score=106.88  Aligned_cols=89  Identities=20%  Similarity=0.258  Sum_probs=75.6

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch---hH-HHHHHHHhhhCCCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG---IF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~---~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      +.|...+.||+|+||.||+             +... .+..||+|.+.......   .+ |.+|+.++..++||||++++
T Consensus        11 ~~y~i~~~lg~G~~g~V~~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~   77 (294)
T 4eqm_A           11 ERYKIVDKLGGGGMSTVYL-------------AEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMI   77 (294)
T ss_dssp             TTEEEEEEEEEETTEEEEE-------------EEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEE
T ss_pred             ccEEEEEEEccCCCEEEEE-------------EEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEE
Confidence            4678889999999999999             7643 58899999985433222   23 99999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                       +++...+..+ +||||+++|+|.+++..
T Consensus        78 -~~~~~~~~~~-lv~e~~~g~~L~~~l~~  104 (294)
T 4eqm_A           78 -DVDEEDDCYY-LVMEYIEGPTLSEYIES  104 (294)
T ss_dssp             -EEEECSSEEE-EEEECCCSCBHHHHHHH
T ss_pred             -EeeeeCCeEE-EEEeCCCCCCHHHHHHh
Confidence             9998888888 99999999999999864

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.21  E-value=1.4e-11  Score=112.09  Aligned_cols=96  Identities=19%  Similarity=0.181  Sum_probs=73.3

Q ss_pred             cccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccceEee
Q 043820          159 SINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSVVIR  236 (282)
Q Consensus       159 ~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~~~~  236 (282)
                      ...+.||+|+||.||+             +... ++..||+|.+........+ |.+|+.+|.+++|+||++++ +++..
T Consensus        92 ~~~~~lG~G~~g~Vy~-------------a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~-~~~~~  157 (373)
T 2x4f_A           92 SKTEILGGGRFGQVHK-------------CEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLY-DAFES  157 (373)
T ss_dssp             EEEEECC-----CEEE-------------EEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEE-EEEEC
T ss_pred             ecceEEecCcCEEEEE-------------EEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEE-EEEEE
Confidence            3356899999999999             7654 5899999999765444455 99999999999999999999 99998


Q ss_pred             CCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          237 PGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       237 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      .+..+ |||||+++|+|.+++....  ..++|..+
T Consensus       158 ~~~~~-lv~E~~~~~~L~~~l~~~~--~~l~~~~~  189 (373)
T 2x4f_A          158 KNDIV-LVMEYVDGGELFDRIIDES--YNLTELDT  189 (373)
T ss_dssp             SSEEE-EEEECCTTCEEHHHHHHTG--GGCCHHHH
T ss_pred             CCEEE-EEEeCCCCCcHHHHHHhcC--CCCCHHHH
Confidence            88888 9999999999999886432  23444433

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.20  E-value=1.1e-11  Score=107.94  Aligned_cols=90  Identities=17%  Similarity=0.248  Sum_probs=76.3

Q ss_pred             cCccccceecccCccceeccccccccccccceeecCC--------CcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCcc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARID--------ARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSR  226 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~--------~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nl  226 (282)
                      ++|...+.||+|+||.||+             +....        +..||+|.+........+ |.+|+.++..++|+||
T Consensus         8 ~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~i   74 (289)
T 4fvq_A            8 EDLIFNESLGQGTFTKIFK-------------GVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHL   74 (289)
T ss_dssp             GGEEEEEEEEEETTEEEEE-------------EEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTB
T ss_pred             hHeeeeeeeccCCCceEEE-------------EEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCE
Confidence            4577789999999999999             54332        257999999765544555 9999999999999999


Q ss_pred             ceeccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          227 PRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       227 v~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ++++ +++..++..+ +||||+++|+|.+++...
T Consensus        75 v~~~-~~~~~~~~~~-lv~e~~~~~~L~~~l~~~  106 (289)
T 4fvq_A           75 VLNY-GVCVCGDENI-LVQEFVKFGSLDTYLKKN  106 (289)
T ss_dssp             CCEE-EEECCTTCCE-EEEECCTTCBHHHHHHHT
T ss_pred             eEEE-EEEEeCCCCE-EEEECCCCCCHHHHHHhC
Confidence            9999 9999888888 999999999999999754

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.19  E-value=9.7e-12  Score=108.74  Aligned_cols=99  Identities=16%  Similarity=0.157  Sum_probs=78.3

Q ss_pred             cCccccceecccCccceeccccccccccccceeec-----CCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCcccee
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-----IDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-----~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      ++|...+.||+|+||.||+             +..     .++..||+|.+........+ |.+|+.++..++|+||+++
T Consensus        10 ~~~~~~~~lg~G~~g~V~~-------------~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   76 (295)
T 3ugc_A           10 RHLKFLQQLGKGNFGSVEM-------------CRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY   76 (295)
T ss_dssp             GGEEEEEEEEECSSEEEEE-------------EEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             HHhhhhheeeccCCEEEEE-------------EEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeE
Confidence            4577789999999999999             652     35789999999765444445 9999999999999999999


Q ss_pred             ccceEeeC--CeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          230 YPSVVIRP--GYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       230 ~~g~~~~~--~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      + +++...  ...+ +||||+++|+|.+++....  ..++|...
T Consensus        77 ~-~~~~~~~~~~~~-lv~e~~~~~~L~~~l~~~~--~~~~~~~~  116 (295)
T 3ugc_A           77 K-GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHK--ERIDHIKL  116 (295)
T ss_dssp             E-EEECHHHHTSCE-EEEECCTTCBHHHHHHHCG--GGCCHHHH
T ss_pred             E-EEEecCCCCceE-EEEEeCCCCCHHHHHHhcc--cccCHHHH
Confidence            9 988653  3466 9999999999999996543  23454433

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.19  E-value=8e-12  Score=114.43  Aligned_cols=101  Identities=17%  Similarity=0.187  Sum_probs=79.8

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCccceeccc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      +.|...+.||+|+||.||+             +... ++..||+|.+...... ..+ +.+|+.++.+++|+||++++ +
T Consensus         9 ~~y~i~~~LG~G~~g~Vy~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~-~   74 (396)
T 4eut_A            9 HLWLLSDILGQGATANVFR-------------GRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF-A   74 (396)
T ss_dssp             EEEEEEEEEEECSSEEEEE-------------EEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEE-E
T ss_pred             CceEEEEEEEcCCCeEEEE-------------EEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEE-E
Confidence            4577889999999999999             7755 4889999999754322 234 89999999999999999999 9


Q ss_pred             eEeeCC--eEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          233 VVIRPG--YKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       233 ~~~~~~--~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      ++....  ..+ +||||+++|+|.+++........+++...
T Consensus        75 ~~~~~~~~~~~-lv~e~~~~g~L~~~l~~~~~~~~l~~~~~  114 (396)
T 4eut_A           75 IEEETTTRHKV-LIMEFCPCGSLYTVLEEPSNAYGLPESEF  114 (396)
T ss_dssp             EEECTTTCCEE-EEECCCTTEEHHHHTTSGGGTTCCCHHHH
T ss_pred             eeccCCCCeeE-EEEecCCCCCHHHHHHhhhcccCCCHHHH
Confidence            887655  556 99999999999999976443223555443

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.19  E-value=9.2e-12  Score=109.63  Aligned_cols=108  Identities=18%  Similarity=0.235  Sum_probs=83.9

Q ss_pred             ccCHHHHHHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchh-H-HHHHHHHhhhC-
Q 043820          145 LFELATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGI-F-FARSVTEVAKI-  221 (282)
Q Consensus       145 ~~~~~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~-~-f~~e~~~l~~l-  221 (282)
                      .+...++....++|...+.||+|+||.||++...+.       ....++..||+|.+........ + +.+|+.++.++ 
T Consensus        16 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~-------~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~   88 (316)
T 2xir_A           16 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGI-------DKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG   88 (316)
T ss_dssp             CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESS-------SSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC
T ss_pred             cccccceecchhheeeeeEEcCCCceeEEEEEEecC-------CccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcc
Confidence            355667777788899999999999999999221110       0123468999999976544333 3 99999999999 


Q ss_pred             CCCccceeccceEeeCCe-EEEEEEecCCCCCccccccCCC
Q 043820          222 YARSRPRSYPSVVIRPGY-KVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       222 ~H~nlv~l~~g~~~~~~~-~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      +||||++++ +++...+. .+ +||||+++|+|.+++....
T Consensus        89 ~hp~iv~~~-~~~~~~~~~~~-lv~e~~~~~~L~~~l~~~~  127 (316)
T 2xir_A           89 HHLNVVNLL-GACTKPGGPLM-VIVEFCKFGNLSTYLRSKR  127 (316)
T ss_dssp             CCTTBCCEE-EEECCTTSCCE-EEEECCTTEEHHHHHHTCT
T ss_pred             cCCCeeeEE-EEEecCCCceE-EEEEcCCCCcHHHHHHhcc
Confidence            799999999 99877655 55 9999999999999997654

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.19  E-value=8.6e-12  Score=110.87  Aligned_cols=98  Identities=12%  Similarity=0.044  Sum_probs=77.1

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhHHHHHHHHhhhCCCCccceeccce
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      ..++|...+.||+|+||.||+             +... +..||+|++.........+..|+.++.+++|||||+++ ++
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~-------------~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~-~~   86 (322)
T 3soc_A           22 QSMPLQLLEVKARGRFGCVWK-------------AQLL-NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFI-GA   86 (322)
T ss_dssp             TTEEEEEEEEEECSTTCEEEE-------------EEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEE-EE
T ss_pred             chhhchhhheecccCceEEEE-------------EEEC-CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhc-ce
Confidence            345678889999999999999             8664 78999999965332222277899999999999999999 99


Q ss_pred             EeeCCe----EEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          234 VIRPGY----KVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       234 ~~~~~~----~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      +.....    .+ +||||+++|+|.+++...    .++|..+
T Consensus        87 ~~~~~~~~~~~~-lv~e~~~~g~L~~~l~~~----~~~~~~~  123 (322)
T 3soc_A           87 EKRGTSVDVDLW-LITAFHEKGSLSDFLKAN----VVSWNEL  123 (322)
T ss_dssp             EEEECSSSEEEE-EEEECCTTCBHHHHHHHC----CBCHHHH
T ss_pred             eccCCCCCceEE-EEEecCCCCCHHHHHHhc----CCCHHHH
Confidence            887543    45 999999999999999643    2555544

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.18  E-value=9e-12  Score=111.33  Aligned_cols=97  Identities=14%  Similarity=0.084  Sum_probs=78.6

Q ss_pred             HHHHhccCccccceecccCccceeccccccccccccceeec------CCCcEEEEEEccCCCCc-hhH-HHHHHHHhhhC
Q 043820          150 TIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR------IDARVVAARIVFAGSVT-GIF-FARSVTEVAKI  221 (282)
Q Consensus       150 el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~------~~~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l  221 (282)
                      +++...++|...+.||+|+||.||+             +..      ..+..||+|.+...... ..+ +.+|+.++.++
T Consensus        39 ~~~~~~~~y~~~~~lG~G~~g~V~~-------------~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l  105 (344)
T 1rjb_A           39 KWEFPRENLEFGKVLGSGAFGKVMN-------------ATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQL  105 (344)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEE-------------EEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHH
T ss_pred             CcccCHHHceeeeeecCCCCceeEE-------------eeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhh
Confidence            3445667888889999999999999             553      24568999999754322 234 99999999999


Q ss_pred             -CCCccceeccceEeeCCeEEEEEEecCCCCCccccccCCC
Q 043820          222 -YARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       222 -~H~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                       +||||++++ +++...+..+ +||||+++|+|.+++....
T Consensus       106 ~~hp~iv~~~-~~~~~~~~~~-lv~e~~~~g~L~~~l~~~~  144 (344)
T 1rjb_A          106 GSHENIVNLL-GACTLSGPIY-LIFEYCCYGDLLNYLRSKR  144 (344)
T ss_dssp             CCCTTBCCEE-EEECSSSSCE-EEEECCTTCBHHHHHHTTT
T ss_pred             cCCCCeeeEE-EEEeeCCccE-EEEecCCCCcHHHHHhhcc
Confidence             999999999 9999888888 9999999999999997643

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.18  E-value=2.3e-11  Score=105.21  Aligned_cols=89  Identities=17%  Similarity=0.194  Sum_probs=77.0

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      +.|...+.||+|+||.||+             +... .+..+|+|.+........+ +.+|+.++..++|+||++++ ++
T Consensus         9 ~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~-~~   74 (277)
T 3f3z_A            9 QYYTLENTIGRGSWGEVKI-------------AVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLY-ET   74 (277)
T ss_dssp             HHEEEEEEEEEETTEEEEE-------------EEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEE-EE
T ss_pred             hhEEeeeEEeecCCEEEEE-------------EEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEE-EE
Confidence            4577889999999999999             7654 4679999998765444455 99999999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccC
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +......+ +||||+++|+|.+++..
T Consensus        75 ~~~~~~~~-lv~e~~~~~~L~~~~~~   99 (277)
T 3f3z_A           75 FEDNTDIY-LVMELCTGGELFERVVH   99 (277)
T ss_dssp             EECSSEEE-EEEECCCSCBHHHHHHH
T ss_pred             EecCCeEE-EEEeccCCCcHHHHHHH
Confidence            99888888 99999999999988764

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.18  E-value=3.1e-11  Score=107.61  Aligned_cols=90  Identities=20%  Similarity=0.134  Sum_probs=76.3

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc------hhH-HHHHHHHhhhCCCCccc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT------GIF-FARSVTEVAKIYARSRP  227 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~------~~~-f~~e~~~l~~l~H~nlv  227 (282)
                      +.|...+.||+|+||.||+             +... ++..||+|.+......      ..+ +.+|+.++..++||||+
T Consensus        11 ~~y~~~~~lG~G~~g~V~~-------------~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv   77 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKK-------------CREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI   77 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEE-------------EEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBC
T ss_pred             cceEeceEEeeCCCeEEEE-------------EEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCC
Confidence            3577789999999999999             7654 5889999998653321      234 99999999999999999


Q ss_pred             eeccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          228 RSYPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       228 ~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +++ +++......+ +||||+++|+|.+++...
T Consensus        78 ~~~-~~~~~~~~~~-lv~e~~~~~~L~~~l~~~  108 (326)
T 2y0a_A           78 TLH-EVYENKTDVI-LILELVAGGELFDFLAEK  108 (326)
T ss_dssp             CEE-EEEECSSEEE-EEEECCCSCBHHHHHTTS
T ss_pred             cEE-EEEEeCCEEE-EEEEcCCCCCHHHHHHhc
Confidence            999 9998888888 999999999999998653

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.18  E-value=3e-11  Score=110.10  Aligned_cols=91  Identities=7%  Similarity=-0.006  Sum_probs=78.0

Q ss_pred             ccCccccceeccc--CccceeccccccccccccceeecC-CCcEEEEEEccCCCCch--hH-HHHHHHHhhhCCCCccce
Q 043820          155 TDNFSINNKLGEG--GFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG--IF-FARSVTEVAKIYARSRPR  228 (282)
Q Consensus       155 t~~f~~~~~lG~G--~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l~H~nlv~  228 (282)
                      .++|...+.||+|  +||.||+             +... ++..||+|.+.......  .+ +.+|+.++..++|||||+
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~-------------~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~   90 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNL-------------ARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVP   90 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEE-------------EEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CCcEEEEecccCCcCCceEEEE-------------EEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCc
Confidence            4568888999999  9999999             7755 58999999997543322  23 889999999999999999


Q ss_pred             eccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          229 SYPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       229 l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ++ +++...+..+ +||||+++|+|.+++...
T Consensus        91 ~~-~~~~~~~~~~-lv~e~~~~~~L~~~l~~~  120 (389)
T 3gni_B           91 YR-ATFIADNELW-VVTSFMAYGSAKDLICTH  120 (389)
T ss_dssp             EE-EEEEETTEEE-EEEECCTTCBHHHHHHHT
T ss_pred             Ee-EEEEECCEEE-EEEEccCCCCHHHHHhhh
Confidence            99 9999998888 999999999999998654

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.18  E-value=8.8e-12  Score=109.62  Aligned_cols=95  Identities=15%  Similarity=0.078  Sum_probs=79.2

Q ss_pred             HHHhccCccccceecccCccceeccccccccccccceeec------CCCcEEEEEEccCCCCch-hH-HHHHHHHhhhC-
Q 043820          151 IANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR------IDARVVAARIVFAGSVTG-IF-FARSVTEVAKI-  221 (282)
Q Consensus       151 l~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~------~~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l-  221 (282)
                      +....++|...+.||+|+||.||+             +..      ..+..||+|.+....... .+ +.+|+.++.++ 
T Consensus        18 ~~~~~~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~   84 (313)
T 1t46_A           18 WEFPRNRLSFGKTLGAGAFGKVVE-------------ATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG   84 (313)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEE-------------EEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC
T ss_pred             cccChhhhhHHHhhCccCCcceEE-------------EEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcc
Confidence            334556788889999999999999             542      346789999997654333 34 99999999999 


Q ss_pred             CCCccceeccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          222 YARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       222 ~H~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +||||++++ +++..++..+ +||||+++|+|.+++...
T Consensus        85 ~h~~i~~~~-~~~~~~~~~~-lv~e~~~~~~L~~~l~~~  121 (313)
T 1t46_A           85 NHMNIVNLL-GACTIGGPTL-VITEYCCYGDLLNFLRRK  121 (313)
T ss_dssp             CCTTBCCEE-EEECSSSSCE-EEEECCTTEEHHHHHHHT
T ss_pred             cCCCeeeEE-EEEecCCCcE-EEEecCCCCCHHHHHHhc
Confidence            999999999 9999888888 999999999999999754

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.18  E-value=5.5e-12  Score=111.61  Aligned_cols=99  Identities=20%  Similarity=0.125  Sum_probs=77.0

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch--hH-HHHHHHHhhhC-CCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG--IF-FARSVTEVAKI-YARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l-~H~nlv~l~  230 (282)
                      ++|...++||+|+||.||+             +... ++..||||++.......  .. +..|+..+..+ +|+||++++
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~-------------~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~  123 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFK-------------VRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLE  123 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEE-------------EEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             hheeeeheeccCCCeEEEE-------------EEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence            4688889999999999999             8765 68999999886543322  22 66666666555 999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                       +++.+++..+ +||||+ +|+|.+++....  ..++|..+.
T Consensus       124 -~~~~~~~~~~-lv~e~~-~~~L~~~~~~~~--~~l~~~~~~  160 (311)
T 3p1a_A          124 -QAWEEGGILY-LQTELC-GPSLQQHCEAWG--ASLPEAQVW  160 (311)
T ss_dssp             -EEEEETTEEE-EEEECC-CCBHHHHHHHHC--SCCCHHHHH
T ss_pred             -EEEEeCCEEE-EEEecc-CCCHHHHHHhcC--CCCCHHHHH
Confidence             9999999888 999999 679998886543  246776554

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.18  E-value=3e-11  Score=105.27  Aligned_cols=88  Identities=13%  Similarity=0.122  Sum_probs=74.3

Q ss_pred             ccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccceEe
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSVVI  235 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~~~  235 (282)
                      +.....||+|+||.||+             +.. .++..||+|.+........+ +.+|+.++..++|+||++++ +++.
T Consensus        24 ~~~~~~lg~G~~g~Vy~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~-~~~~   89 (295)
T 2clq_A           24 NGDRVVLGKGTYGIVYA-------------GRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYL-GSFS   89 (295)
T ss_dssp             TSSBCEEEECSSSEEEE-------------EEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEE-EEEE
T ss_pred             CCCcEEEeecCcEEEEE-------------EEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEe-eEEE
Confidence            44446999999999999             764 45789999999765544455 99999999999999999999 9999


Q ss_pred             eCCeEEEEEEecCCCCCccccccCC
Q 043820          236 RPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       236 ~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ..+..+ +||||+++|+|.+++...
T Consensus        90 ~~~~~~-lv~e~~~~~~L~~~l~~~  113 (295)
T 2clq_A           90 ENGFIK-IFMEQVPGGSLSALLRSK  113 (295)
T ss_dssp             ETTEEE-EEEECCSEEEHHHHHHHT
T ss_pred             eCCcEE-EEEEeCCCCCHHHHHHhh
Confidence            888888 999999999999999754

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.18  E-value=1.9e-11  Score=118.36  Aligned_cols=99  Identities=19%  Similarity=0.214  Sum_probs=76.6

Q ss_pred             cCccccc-eecccCccceeccccccccccccceeecC---CCcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCcccee
Q 043820          156 DNFSINN-KLGEGGFGPVYKVVAAGICFAGTITGARI---DARVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       156 ~~f~~~~-~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~---~~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      +++.... .||+|+||.||+             |...   .+..||||.++..... ..+ |.+|+.+|.+++|+|||++
T Consensus       335 ~~~~~~~~~LG~G~fG~Vy~-------------~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l  401 (613)
T 2ozo_A          335 DNLLIADIELGCGNFGSVRQ-------------GVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRL  401 (613)
T ss_dssp             TSEEEEEEEEEECSSSEEEE-------------EEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             cceeEcCcEEecCCCcEEEE-------------EEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeE
Confidence            3343334 799999999999             7643   4567999999765433 334 9999999999999999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      + |++.. +..+ +||||+++|+|.++|....  ..++|..++
T Consensus       402 ~-~~~~~-~~~~-lv~E~~~~g~L~~~l~~~~--~~l~~~~~~  439 (613)
T 2ozo_A          402 I-GVCQA-EALM-LVMEMAGGGPLHKFLVGKR--EEIPVSNVA  439 (613)
T ss_dssp             E-EEEES-SSEE-EEEECCTTCBHHHHHTTCT--TTSCHHHHH
T ss_pred             E-EEecc-CCeE-EEEEeCCCCcHHHHHhhcc--CCCCHHHHH
Confidence            9 99865 5566 9999999999999997543  346665443

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.17  E-value=2.3e-11  Score=106.02  Aligned_cols=89  Identities=12%  Similarity=0.101  Sum_probs=75.9

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCccceeccc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      +.|...+.||+|+||.||+             +... ++..+|+|.+...... ..+ +.+|+.++..++||||++++ +
T Consensus        22 ~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~-~   87 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHL-------------VEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIF-E   87 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEE-------------EEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEE-E
T ss_pred             hheeecceeccCCCeEEEE-------------EEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHH-H
Confidence            3577789999999999999             7654 5889999998754333 334 99999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ++......+ +||||+++|+|.+++..
T Consensus        88 ~~~~~~~~~-lv~e~~~~~~L~~~l~~  113 (285)
T 3is5_A           88 VFEDYHNMY-IVMETCEGGELLERIVS  113 (285)
T ss_dssp             EEECSSEEE-EEECCCSCCBHHHHHHH
T ss_pred             heecCCeEE-EEEEeCCCCcHHHHHHh
Confidence            998888888 99999999999998854

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.17  E-value=3.6e-11  Score=103.99  Aligned_cols=90  Identities=19%  Similarity=0.125  Sum_probs=76.9

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC--chhH-HHHHHHHhhhC-CCCcccee
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV--TGIF-FARSVTEVAKI-YARSRPRS  229 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~--~~~~-f~~e~~~l~~l-~H~nlv~l  229 (282)
                      +++|...+.||+|+||.||+             +... ++..||+|.+.....  .... +.+|+..+..+ +||||+++
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~   76 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFK-------------CVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY   76 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEE-------------EEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCE
T ss_pred             cchhhhhhhhcCCCceEEEE-------------EEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeee
Confidence            35678889999999999999             7755 689999999875422  2233 89999999999 99999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      + +++...+..+ +||||+++|+|.+++..
T Consensus        77 ~-~~~~~~~~~~-lv~e~~~~~~L~~~l~~  104 (289)
T 1x8b_A           77 F-SAWAEDDHML-IQNEYCNGGSLADAISE  104 (289)
T ss_dssp             E-EEEEETTEEE-EEEECCTTCBHHHHHHH
T ss_pred             e-eeeecCCeEE-EEEEecCCCcHHHHHHh
Confidence            9 9999888888 99999999999999864

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.17  E-value=1.9e-11  Score=109.32  Aligned_cols=86  Identities=12%  Similarity=0.106  Sum_probs=74.8

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCch-----------------hH-HHHHHH
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTG-----------------IF-FARSVT  216 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~-----------------~~-f~~e~~  216 (282)
                      .++|...+.||+|+||.||+             +.. ++..||+|.+.......                 .+ |.+|+.
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~-------------~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   95 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIIL-------------CEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQ   95 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEE-------------EEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHH
T ss_pred             cCceEEEEEEcCCCCeEEEE-------------EEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHH
Confidence            35788889999999999999             877 88999999986432111                 15 999999


Q ss_pred             HhhhCCCCccceeccceEeeCCeEEEEEEecCCCCCcccc
Q 043820          217 EVAKIYARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPD  256 (282)
Q Consensus       217 ~l~~l~H~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~  256 (282)
                      ++..++|+||++++ +++...+..+ +||||+++|+|.++
T Consensus        96 ~l~~l~h~~i~~~~-~~~~~~~~~~-lv~e~~~~~~L~~~  133 (348)
T 2pml_X           96 IITDIKNEYCLTCE-GIITNYDEVY-IIYEYMENDSILKF  133 (348)
T ss_dssp             HHTTCCCTTBCCCS-EEEESSSEEE-EEEECCTTCBSSEE
T ss_pred             HHHhCCCCCcceEE-EEEeeCCeEE-EEEeccCCCcHHHH
Confidence            99999999999999 9999888888 99999999999999

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.17  E-value=2e-11  Score=108.41  Aligned_cols=98  Identities=18%  Similarity=0.235  Sum_probs=73.8

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCccceeccc
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      .++|...+.||+|+||.||++...+.       ....++..||+|.+....... .. |.+|+.++..++|+||++++ +
T Consensus        29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~-------~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~-~  100 (327)
T 2yfx_A           29 RKNITLIRGLGHGAFGEVYEGQVSGM-------PNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCI-G  100 (327)
T ss_dssp             GGGCEEEEECC--CSSCEEEEEC---------------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEE-E
T ss_pred             hhheEEEEEEcCCCCeeEEEEEEcCC-------CCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEE-E
Confidence            45688889999999999999221110       012346789999997543333 33 99999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCCC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      ++......+ +||||+++|+|.+++....
T Consensus       101 ~~~~~~~~~-lv~e~~~~~~L~~~l~~~~  128 (327)
T 2yfx_A          101 VSLQSLPRF-ILMELMAGGDLKSFLRETR  128 (327)
T ss_dssp             EECSSSSCE-EEEECCTTEEHHHHHHHTS
T ss_pred             EEcCCCCcE-EEEecCCCCcHHHHHHhhc
Confidence            999888888 9999999999999997543

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.16  E-value=2.8e-11  Score=107.95  Aligned_cols=101  Identities=18%  Similarity=0.212  Sum_probs=77.1

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCch-hH-HHHHHHHhhhC-CCCccceec
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTG-IF-FARSVTEVAKI-YARSRPRSY  230 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l-~H~nlv~l~  230 (282)
                      ..++|...+.||+|+||.||++...+...     ....++..||+|.+....... .+ +.+|+.++..+ +||||++++
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~-----~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~  107 (334)
T 2pvf_A           33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDK-----DKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLL  107 (334)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTCST-----TCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CHhHeEEeeEEeecCceeEEEeEeccccc-----cccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEE
Confidence            45678888999999999999932211100     001246789999997654333 33 99999999999 999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCCC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                       +++...+..+ +||||+++|+|.+++....
T Consensus       108 -~~~~~~~~~~-lv~e~~~~~~L~~~l~~~~  136 (334)
T 2pvf_A          108 -GACTQDGPLY-VIVEYASKGNLREYLRARR  136 (334)
T ss_dssp             -EEECSSSCCE-EEEECCTTCBHHHHHHTTS
T ss_pred             -EEEccCCceE-EEEECCCCCcHHHHHHHhc
Confidence             9998888888 9999999999999997643

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.16  E-value=3.2e-11  Score=108.62  Aligned_cols=89  Identities=16%  Similarity=0.148  Sum_probs=77.1

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCccceeccc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      ++|...+.||+|+||.||+             +... ++..||+|.+....... .+ +.+|+.++..++|+||++++ +
T Consensus        33 ~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~-~   98 (360)
T 3eqc_A           33 DDFEKISELGAGNGGVVFK-------------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFY-G   98 (360)
T ss_dssp             GGEEEEEEEEECSSCEEEE-------------EEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEE-E
T ss_pred             ccceeeeeecCCCCeEEEE-------------EEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEe-E
Confidence            4578889999999999999             7654 58899999987653333 33 99999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ++..++..+ +||||+++|+|.+++..
T Consensus        99 ~~~~~~~~~-lv~e~~~~~~L~~~l~~  124 (360)
T 3eqc_A           99 AFYSDGEIS-ICMEHMDGGSLDQVLKK  124 (360)
T ss_dssp             EEEETTEEE-EEECCCTTCBHHHHHHH
T ss_pred             EEEECCEEE-EEEECCCCCCHHHHHHH
Confidence            999988888 99999999999999864

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.16  E-value=3.1e-11  Score=108.73  Aligned_cols=90  Identities=14%  Similarity=0.175  Sum_probs=72.2

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceecc
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      ..+.|...+.||+|+||.||+             +... .+..||+|.+....  ..+ +.+|+.++.+++|+||++++ 
T Consensus        51 ~~~~y~~~~~lG~G~~g~Vy~-------------~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~-  114 (349)
T 2w4o_A           51 LSDFFEVESELGRGATSIVYR-------------CKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLK-  114 (349)
T ss_dssp             GGGTEEEEEEEEECSSEEEEE-------------EEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEE-
T ss_pred             ccCcEEEeeEEeeCCCEEEEE-------------EEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCccee-
Confidence            456788889999999999999             7765 47899999987532  334 99999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +++..+...+ +||||+++|+|.+++...
T Consensus       115 ~~~~~~~~~~-lv~e~~~~~~L~~~l~~~  142 (349)
T 2w4o_A          115 EIFETPTEIS-LVLELVTGGELFDRIVEK  142 (349)
T ss_dssp             EEEECSSEEE-EEECCCCSCBHHHHHTTC
T ss_pred             eeEecCCeEE-EEEEeCCCCCHHHHHHhc
Confidence            9999888888 999999999999998754

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.16  E-value=2.9e-11  Score=108.61  Aligned_cols=89  Identities=12%  Similarity=0.047  Sum_probs=75.6

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhCCCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ++|...+.||+|+||.||+             +... ++..||+|.+....   ..... +.+|+.++..++||||++++
T Consensus         5 ~~y~~~~~lG~G~fg~V~~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~   71 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFGKVIL-------------VREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK   71 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEE-------------EEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEE
T ss_pred             HHeEEEEEEecCCCeEEEE-------------EEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceE
Confidence            5688889999999999999             7654 58899999986431   22233 89999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                       +++...+..+ +||||+++|+|.+++..
T Consensus        72 -~~~~~~~~~~-lv~E~~~gg~L~~~l~~   98 (337)
T 1o6l_A           72 -YAFQTHDRLC-FVMEYANGGELFFHLSR   98 (337)
T ss_dssp             -EEEECSSEEE-EEEECCTTCBHHHHHHH
T ss_pred             -EEEEeCCEEE-EEEeCCCCCcHHHHHHh
Confidence             9998888888 99999999999988854

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.16  E-value=5.2e-11  Score=103.27  Aligned_cols=90  Identities=18%  Similarity=0.292  Sum_probs=76.5

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch--hH-HHHHHHHhhhCCCCccceec
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG--IF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      .++|...+.||+|+||.||+             +... ++..||+|.+.......  .+ +.+|+.++.+++|+||++++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~   71 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRR-------------CVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH   71 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEE-------------EEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             hhhhhhhhhhcCcCCeEEEE-------------EEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEE
Confidence            46788889999999999999             7654 58899999986543332  23 89999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                       +++...+..+ +||||+++|+|.+++..
T Consensus        72 -~~~~~~~~~~-~v~e~~~~~~l~~~~~~   98 (284)
T 3kk8_A           72 -DSIQEESFHY-LVFDLVTGGELFEDIVA   98 (284)
T ss_dssp             -EEEECSSEEE-EEECCCCSCBHHHHHHH
T ss_pred             -EEEEcCCEEE-EEEecCCCCCHHHHHHh
Confidence             9998888888 99999999999887754

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.16  E-value=5.7e-11  Score=102.50  Aligned_cols=90  Identities=16%  Similarity=0.150  Sum_probs=77.1

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC-chhH-HHHHHHHhhhCCCCccceeccc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV-TGIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~-~~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      ++|...+.||+|+||.||+             +... ++..||+|.+..... ...+ +.+|+.++..++|+||++++ +
T Consensus         7 ~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~-~   72 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQL-------------AVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY-G   72 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEE-------------EEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEE-E
T ss_pred             cceEEEEEeecCCCcEEEE-------------EEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeee-e
Confidence            4577889999999999999             7654 588999999864333 2334 99999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ++..++..+ +||||+++|+|.+++...
T Consensus        73 ~~~~~~~~~-lv~e~~~~~~L~~~l~~~   99 (276)
T 2yex_A           73 HRREGNIQY-LFLEYCSGGELFDRIEPD   99 (276)
T ss_dssp             EEEETTEEE-EEEECCTTEEGGGGSBTT
T ss_pred             EEEcCCEEE-EEEEecCCCcHHHHHhhc
Confidence            999888888 999999999999998653

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.16  E-value=7.2e-11  Score=103.37  Aligned_cols=89  Identities=12%  Similarity=0.160  Sum_probs=69.8

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc--------------------------
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT--------------------------  207 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~--------------------------  207 (282)
                      .++|...+.||+|+||.||+             +... ++..||+|.+......                          
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~-------------a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKL-------------AYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRG   78 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEE-------------EEETTTTEEEEEEEEECC-----------------------------
T ss_pred             ecceEEEeEEeecCCEEEEE-------------EEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccc
Confidence            35688889999999999999             7654 5789999998643211                          


Q ss_pred             hhH-HHHHHHHhhhCCCCccceeccceEee--CCeEEEEEEecCCCCCcccccc
Q 043820          208 GIF-FARSVTEVAKIYARSRPRSYPSVVIR--PGYKVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       208 ~~~-f~~e~~~l~~l~H~nlv~l~~g~~~~--~~~~~~lv~Ey~~~GsL~~~l~  258 (282)
                      ..+ +.+|+.++..++||||++++ +++..  ....+ +||||+++|+|.+++.
T Consensus        79 ~~~~~~~E~~~l~~l~h~~iv~~~-~~~~~~~~~~~~-lv~e~~~~~~l~~~~~  130 (298)
T 2zv2_A           79 PIEQVYQEIAILKKLDHPNVVKLV-EVLDDPNEDHLY-MVFELVNQGPVMEVPT  130 (298)
T ss_dssp             --CHHHHHHHHHHTCCCTTBCCEE-EEEECSSSSEEE-EEEECCTTCBSCCSSC
T ss_pred             hHHHHHHHHHHHHhCCCCCCCeEE-EEEEcCCCCEEE-EEEecCCCCcHHHHhh
Confidence            123 89999999999999999999 99876  44556 9999999999998764

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.15  E-value=2.6e-11  Score=110.39  Aligned_cols=100  Identities=16%  Similarity=0.158  Sum_probs=77.6

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchh-H-HHHHHHHhhhC-CCCccceec
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGI-F-FARSVTEVAKI-YARSRPRSY  230 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~-~-f~~e~~~l~~l-~H~nlv~l~  230 (282)
                      ..++|...+.||+|+||.||++...+...     .....+..||+|++........ + +.+|+.++..+ +|+|||+++
T Consensus        67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~-----~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~  141 (382)
T 3tt0_A           67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDK-----DKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLL  141 (382)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEETSST-----TCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             chhheEeeeEEecCCCeEEEEEEEccccc-----cccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhhe
Confidence            45678888999999999999932221100     0012346899999976543333 3 99999999999 999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                       +++...+..+ +||||+++|+|.+++...
T Consensus       142 -~~~~~~~~~~-lv~e~~~~g~L~~~l~~~  169 (382)
T 3tt0_A          142 -GACTQDGPLY-VIVEYASKGNLREYLQAR  169 (382)
T ss_dssp             -EEECSSSSCE-EEEECCTTCBHHHHHHHT
T ss_pred             -eeeccCCceE-EEEEecCCCcHHHHHHHh
Confidence             9999888888 999999999999999754

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.15  E-value=2.9e-11  Score=107.81  Aligned_cols=90  Identities=14%  Similarity=0.168  Sum_probs=71.6

Q ss_pred             ccCccccceecccCccceeccccccccccccceeec----CCCcEEEEEEccCCCC----chhH-HHHHHHHhhhCCCCc
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR----IDARVVAARIVFAGSV----TGIF-FARSVTEVAKIYARS  225 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~----~~~~~vAvK~l~~~~~----~~~~-f~~e~~~l~~l~H~n  225 (282)
                      .++|...+.||+|+||.||+             +..    ..+..||+|.+.....    .... +.+|+.+|..++|+|
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~-------------~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~   82 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQ-------------VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF   82 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEE-------------EEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTT
T ss_pred             HHHeEEEEEEEeCCCEEEEE-------------EEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCC
Confidence            35678889999999999999             654    3688999999975421    2223 889999999999999


Q ss_pred             cceeccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          226 RPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       226 lv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      |++++ +++...+..+ +||||+++|+|.+++..
T Consensus        83 iv~~~-~~~~~~~~~~-lv~e~~~~~~L~~~l~~  114 (327)
T 3a62_A           83 IVDLI-YAFQTGGKLY-LILEYLSGGELFMQLER  114 (327)
T ss_dssp             BCCEE-EEEECSSCEE-EEEECCTTEEHHHHHHH
T ss_pred             cccee-EEEEcCCEEE-EEEeCCCCCcHHHHHHh
Confidence            99999 9998888888 99999999999988854

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.15  E-value=5.7e-11  Score=106.99  Aligned_cols=89  Identities=13%  Similarity=0.139  Sum_probs=74.9

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCC-----CCchhH-HHHHHHHhhhCCCCccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAG-----SVTGIF-FARSVTEVAKIYARSRPR  228 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~-----~~~~~~-f~~e~~~l~~l~H~nlv~  228 (282)
                      +.|...+.||+|+||.||+             +... ++..||+|.+...     .....+ +.+|+.++..++||||++
T Consensus        24 ~~y~~~~~lG~G~~g~V~~-------------~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~   90 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRR-------------CINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE   90 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEE-------------EEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cceEEeeEEeeCCCEEEEE-------------EEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCc
Confidence            3577789999999999999             7654 5899999998532     112234 999999999999999999


Q ss_pred             eccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          229 SYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       229 l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ++ +++...+..+ +||||+++|+|.+++..
T Consensus        91 ~~-~~~~~~~~~~-lv~e~~~g~~L~~~l~~  119 (351)
T 3c0i_A           91 LL-ETYSSDGMLY-MVFEFMDGADLCFEIVK  119 (351)
T ss_dssp             EE-EEEEETTEEE-EEEECCSSCBHHHHHHH
T ss_pred             EE-EEEEeCCEEE-EEEeCCCCCCHHHHHHH
Confidence            99 9999888888 99999999999887753

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.15  E-value=4.7e-11  Score=104.51  Aligned_cols=91  Identities=19%  Similarity=0.275  Sum_probs=75.7

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceecc
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      ..+.|...+.||+|+||.||+             +... ++..||+|.+........+ |.+|+.++..++||||++++ 
T Consensus        17 ~~~~y~i~~~lg~G~~g~V~~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~-   82 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFGKVYK-------------AKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLL-   82 (302)
T ss_dssp             GGGTEEEEEEEECSTTCCEEE-------------EEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEE-
T ss_pred             CccceeecceeccCCCeEEEE-------------EEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeee-
Confidence            345688889999999999999             7765 4889999998765544455 99999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +++...+..+ +||||+++|+|.+++..
T Consensus        83 ~~~~~~~~~~-lv~e~~~~~~l~~~~~~  109 (302)
T 2j7t_A           83 GAYYHDGKLW-IMIEFCPGGAVDAIMLE  109 (302)
T ss_dssp             EEEECC-CEE-EEEECCTTEEHHHHHHH
T ss_pred             eeeeeCCeEE-EEEEeCCCCcHHHHHHh
Confidence            9998888888 99999999999998864

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.15  E-value=7.9e-11  Score=103.81  Aligned_cols=88  Identities=14%  Similarity=0.049  Sum_probs=74.2

Q ss_pred             Cccc-cceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhC-CCCccceeccc
Q 043820          157 NFSI-NNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKI-YARSRPRSYPS  232 (282)
Q Consensus       157 ~f~~-~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l-~H~nlv~l~~g  232 (282)
                      .|.. .+.||+|+||.||+             +... ++..||+|.+......... +.+|+.++.++ +|+||++++ +
T Consensus        13 ~y~i~~~~lg~G~~g~V~~-------------~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~-~   78 (316)
T 2ac3_A           13 VYQLQEDVLGEGAHARVQT-------------CINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELI-E   78 (316)
T ss_dssp             SCEECCCCCCCCSSEEEEE-------------EECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEE-E
T ss_pred             eEEecCceecCCceEEEEE-------------EEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEE-E
Confidence            3544 36799999999999             7643 6889999999765444445 99999999885 799999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ++...+..+ +||||+++|+|.+++..
T Consensus        79 ~~~~~~~~~-lv~e~~~~~~L~~~l~~  104 (316)
T 2ac3_A           79 FFEEEDRFY-LVFEKMRGGSILSHIHK  104 (316)
T ss_dssp             EEEETTEEE-EEEECCTTCBHHHHHHH
T ss_pred             EEeeCCEEE-EEEEcCCCCcHHHHHhc
Confidence            999888888 99999999999999864

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.14  E-value=2.4e-11  Score=107.61  Aligned_cols=95  Identities=21%  Similarity=0.267  Sum_probs=70.3

Q ss_pred             HHHHhccCccccceecccCccceeccccccccccccceeecCC-C---cEEEEEEccCCC--CchhH-HHHHHHHhhhCC
Q 043820          150 TIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARID-A---RVVAARIVFAGS--VTGIF-FARSVTEVAKIY  222 (282)
Q Consensus       150 el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~-~---~~vAvK~l~~~~--~~~~~-f~~e~~~l~~l~  222 (282)
                      ++....++|...+.||+|+||.||+             +.... +   ..||+|.+....  ....+ |.+|+.++.+++
T Consensus        17 ~~~i~~~~y~~~~~lg~G~~g~Vy~-------------~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~   83 (323)
T 3qup_A           17 DVLIPEQQFTLGRMLGKGEFGSVRE-------------AQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFD   83 (323)
T ss_dssp             TTBCC---CEEEEEEEEETTEEEEE-------------EEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCC
T ss_pred             hcccChhHeEEeceecccCCeEEEE-------------EEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCC
Confidence            3444567788899999999999999             76543 2   379999997542  22334 999999999999


Q ss_pred             CCccceeccceEeeCCeE------EEEEEecCCCCCccccccC
Q 043820          223 ARSRPRSYPSVVIRPGYK------VGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       223 H~nlv~l~~g~~~~~~~~------~~lv~Ey~~~GsL~~~l~~  259 (282)
                      |+||++++ +++......      + +||||+++|+|.+++..
T Consensus        84 h~~iv~~~-~~~~~~~~~~~~~~~~-~v~e~~~~~~L~~~l~~  124 (323)
T 3qup_A           84 HPHVAKLV-GVSLRSRAKGRLPIPM-VILPFMKHGDLHAFLLA  124 (323)
T ss_dssp             CTTBCCCC-EEEECC-------CEE-EEEECCTTCBHHHHHHH
T ss_pred             CCceehhh-ceeeccccccCCCccE-EEEEeccCCcHHHHHHh
Confidence            99999999 998876655      7 99999999999999864

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.14  E-value=3e-11  Score=112.57  Aligned_cols=91  Identities=18%  Similarity=0.242  Sum_probs=75.1

Q ss_pred             ccCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCch--hH-HHHHHHHhhhCCCCccceec
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVTG--IF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      .++|...+.||+|+||.||+             +.. .++..+|+|.+.......  .+ +.+|+.++..++|||||+++
T Consensus        10 ~~~Y~i~~~LG~G~fg~V~~-------------~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~   76 (444)
T 3soa_A           10 TEEYQLFEELGKGAFSVVRR-------------CVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLH   76 (444)
T ss_dssp             HHHEEEEEEEEEC--CEEEE-------------EEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEE
T ss_pred             cCCeEEEEEeccCCCeEEEE-------------EEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEE
Confidence            45688889999999999999             764 368899999987544322  23 99999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                       +++.+.+..+ +||||+++|+|.+++...
T Consensus        77 -~~~~~~~~~~-lv~E~~~gg~L~~~i~~~  104 (444)
T 3soa_A           77 -DSISEEGHHY-LIFDLVTGGELFEDIVAR  104 (444)
T ss_dssp             -EEEECSSEEE-EEECCCBCCBHHHHHHHC
T ss_pred             -EEEEECCEEE-EEEEeCCCCCHHHHHHHc
Confidence             9999888888 999999999998887643

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.14  E-value=9.5e-11  Score=108.20  Aligned_cols=92  Identities=15%  Similarity=0.175  Sum_probs=74.2

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC--------CchhH-HHHHHHHhhhCCC
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS--------VTGIF-FARSVTEVAKIYA  223 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~--------~~~~~-f~~e~~~l~~l~H  223 (282)
                      ..++|...+.||+|+||.||+             +... .+..||+|.+....        ..... +.+|+.+|.+++|
T Consensus       133 ~~~~y~~~~~LG~G~~g~V~~-------------a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h  199 (419)
T 3i6u_A          133 LRDEYIMSKTLGSGACGEVKL-------------AFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH  199 (419)
T ss_dssp             HHTTEEEEEEEEECSSSEEEE-------------EEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCC
T ss_pred             hhccEEEEeEEeeCCCeEEEE-------------EEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCC
Confidence            456788889999999999999             7654 57899999986431        11122 8999999999999


Q ss_pred             CccceeccceEeeCCeEEEEEEecCCCCCccccccCCC
Q 043820          224 RSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       224 ~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      ||||+++ +++ ..+..+ +||||+++|+|.+++....
T Consensus       200 pniv~l~-~~~-~~~~~~-lv~e~~~~g~L~~~l~~~~  234 (419)
T 3i6u_A          200 PCIIKIK-NFF-DAEDYY-IVLELMEGGELFDKVVGNK  234 (419)
T ss_dssp             TTBCCCC-EEE-ESSEEE-EEEECCTTCBGGGGTSSSC
T ss_pred             CCEeeEE-EEE-ecCceE-EEEEcCCCCcHHHHHhccC
Confidence            9999999 986 455566 9999999999999987543

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.14  E-value=4.2e-11  Score=103.17  Aligned_cols=89  Identities=17%  Similarity=0.154  Sum_probs=71.5

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCc----hhH-HHHHHHHhhhCCCCcccee
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVT----GIF-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~----~~~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      .++|...+.||+|+||.||+             +.. .+..||+|.+......    ..+ +.+|+.++..++|+||+++
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~-------------~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~   71 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYR-------------AFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL   71 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEE-------------EEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             hhheeeeeeeccCCCeEEEE-------------EEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeE
Confidence            35678889999999999999             775 3789999998653322    224 8999999999999999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      + +++...+..+ +||||+++|+|.+++..
T Consensus        72 ~-~~~~~~~~~~-lv~e~~~~~~L~~~~~~   99 (271)
T 3dtc_A           72 R-GVCLKEPNLC-LVMEFARGGPLNRVLSG   99 (271)
T ss_dssp             E-EEECCC--CE-EEEECCTTEEHHHHHTS
T ss_pred             E-EEEecCCceE-EEEEcCCCCCHHHHhhc
Confidence            9 9998888888 99999999999999853

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.14  E-value=5.6e-11  Score=105.55  Aligned_cols=89  Identities=16%  Similarity=0.119  Sum_probs=74.3

Q ss_pred             cCccccceecccCccceeccccccccccccceee-----cCCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCcccee
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGA-----RIDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~-----~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      ++|...+.||+|+||.||+             +.     ...+..||+|.+........+ +.+|+.++..++|+||+++
T Consensus        23 ~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~   89 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVEL-------------CRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY   89 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEE-------------EEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             hhhhhhhhccCCCCeEEEE-------------EEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEE
Confidence            4577779999999999999             65     235789999999765544455 9999999999999999999


Q ss_pred             ccceEee--CCeEEEEEEecCCCCCccccccC
Q 043820          230 YPSVVIR--PGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       230 ~~g~~~~--~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      + +++..  ....+ +||||+++|+|.+++..
T Consensus        90 ~-~~~~~~~~~~~~-lv~e~~~~~~L~~~l~~  119 (327)
T 3lxl_A           90 R-GVSYGPGRQSLR-LVMEYLPSGCLRDFLQR  119 (327)
T ss_dssp             E-EEEECSSSCEEE-EEEECCTTCBHHHHHHH
T ss_pred             E-EEEecCCCceEE-EEEeecCCCCHHHHHHh
Confidence            9 98864  34456 99999999999999864

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.14  E-value=3.7e-11  Score=106.34  Aligned_cols=90  Identities=18%  Similarity=0.225  Sum_probs=73.6

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCch--hH-HHHHHHHhhhCCCCccceecc
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTG--IF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      .++|...+.||+|+||.||+             +...++..||+|.+.......  .. +.+|+.++.+++||||++++ 
T Consensus        20 ~~~y~~~~~lG~G~~g~V~~-------------~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~-   85 (311)
T 3niz_A           20 MEKYQKLEKVGEGTYGVVYK-------------AKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLI-   85 (311)
T ss_dssp             SCEEEEEEEEEECSSCEEEE-------------EEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEE-
T ss_pred             HhhhHhhhhccCCCCeEEEE-------------EEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeee-
Confidence            35678889999999999999             887778999999986543222  24 89999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +++......+ +||||+++ +|.+++...
T Consensus        86 ~~~~~~~~~~-lv~e~~~~-~l~~~~~~~  112 (311)
T 3niz_A           86 DVIHSERCLT-LVFEFMEK-DLKKVLDEN  112 (311)
T ss_dssp             EEECCSSCEE-EEEECCSE-EHHHHHHTC
T ss_pred             eEEccCCEEE-EEEcCCCC-CHHHHHHhc
Confidence            9998888888 99999995 788877654

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.14  E-value=4.8e-11  Score=104.80  Aligned_cols=89  Identities=13%  Similarity=0.135  Sum_probs=74.1

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      ++|...+.||+|+||.||+             +... ++..||+|.+........+ +.+|+.++..++||||++++ ++
T Consensus         9 ~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~-~~   74 (304)
T 2jam_A            9 KTFIFMEVLGSGAFSEVFL-------------VKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLE-DI   74 (304)
T ss_dssp             HHEEEEEEEEECSSEEEEE-------------EEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEE-EE
T ss_pred             ccceeeeeccCCCCceEEE-------------EEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehh-hh
Confidence            4577789999999999999             7654 6889999999765444445 99999999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccC
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +...+..+ +||||+++|+|.+++..
T Consensus        75 ~~~~~~~~-lv~e~~~~~~L~~~l~~   99 (304)
T 2jam_A           75 YESTTHYY-LVMQLVSGGELFDRILE   99 (304)
T ss_dssp             EECSSEEE-EEECCCCSCBHHHHHHH
T ss_pred             cccCCEEE-EEEEcCCCccHHHHHHH
Confidence            98888888 99999999999988854

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.13  E-value=4.3e-11  Score=104.09  Aligned_cols=99  Identities=23%  Similarity=0.417  Sum_probs=78.4

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchh-------H-HHHHHHHhhhCCCCc
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGI-------F-FARSVTEVAKIYARS  225 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~-------~-f~~e~~~l~~l~H~n  225 (282)
                      .++|...+.||+|+||.||+             +... ++..||+|.+........       + |.+|+.++.+++|+|
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~   84 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHK-------------GRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN   84 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEE-------------EEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTT
T ss_pred             hccceehhccccCCceeEEE-------------EEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCC
Confidence            35678889999999999999             7754 688999999865332211       4 899999999999999


Q ss_pred             cceeccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          226 RPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       226 lv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      |++++ +++....  + +||||+++|+|.+++....  ..++|..+.
T Consensus        85 i~~~~-~~~~~~~--~-lv~e~~~~~~L~~~l~~~~--~~~~~~~~~  125 (287)
T 4f0f_A           85 IVKLY-GLMHNPP--R-MVMEFVPCGDLYHRLLDKA--HPIKWSVKL  125 (287)
T ss_dssp             BCCEE-EEETTTT--E-EEEECCTTCBHHHHHHCTT--SCCCHHHHH
T ss_pred             chhhh-eeecCCC--e-EEEEecCCCCHHHHHhccc--CCccHHHHH
Confidence            99999 9886554  5 9999999999999887644  245665443

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.13  E-value=2.6e-11  Score=107.38  Aligned_cols=103  Identities=17%  Similarity=0.271  Sum_probs=81.4

Q ss_pred             CCccCHHHHHHhccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhHHHHHHHHhhhC
Q 043820          143 LPLFELATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIFFARSVTEVAKI  221 (282)
Q Consensus       143 ~~~~~~~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l  221 (282)
                      .+.+++.++....+.|...+.||+|+||.||+             +... ++..||+|.+.........+.+|+.++.++
T Consensus        11 ~~~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l   77 (326)
T 2x7f_A           11 LDEIDLSALRDPAGIFELVELVGNGTYGQVYK-------------GRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKY   77 (326)
T ss_dssp             -----CCCCCCCTTTEEEEEEEEEETTEEEEE-------------EEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHH
T ss_pred             chhccchhccCCCCcEEEEEEeccCCCEEEEE-------------EEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhc
Confidence            34456667777888999999999999999999             7754 688999999865433332399999999999


Q ss_pred             -CCCccceeccceEee------CCeEEEEEEecCCCCCccccccCC
Q 043820          222 -YARSRPRSYPSVVIR------PGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       222 -~H~nlv~l~~g~~~~------~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                       +|+||++++ +++..      ....+ +||||+++|+|.+++...
T Consensus        78 ~~h~~i~~~~-~~~~~~~~~~~~~~~~-lv~e~~~~~~L~~~l~~~  121 (326)
T 2x7f_A           78 SHHRNIATYY-GAFIKKNPPGMDDQLW-LVMEFCGAGSVTDLIKNT  121 (326)
T ss_dssp             CCSTTBCCEE-EEEEECC--CCCCEEE-EEEECCTTEEHHHHHHHS
T ss_pred             cCCCCeeeee-eEEeeccCccccceEE-EEEEcCCCCcHHHHHHhc
Confidence             899999999 99876      34556 999999999999998643

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.13  E-value=2.2e-11  Score=107.50  Aligned_cols=86  Identities=15%  Similarity=0.224  Sum_probs=72.1

Q ss_pred             cCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccceE
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSVV  234 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~~  234 (282)
                      ++|...+.||+|+||.||+             +.. .+..||+|.+...  ...+ |.+|+.++.+++||||++++ |++
T Consensus         8 ~~~~~~~~lg~G~~g~V~~-------------~~~-~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~-~~~   70 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCK-------------AKW-RAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLY-GAC   70 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEE-------------EEE-TTEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEE-EBC
T ss_pred             hHeeeeeEeecCCCceEEE-------------EEE-CCeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEE-EEE
Confidence            4567779999999999999             766 4688999998632  3344 99999999999999999999 987


Q ss_pred             eeCCeEEEEEEecCCCCCccccccCCC
Q 043820          235 IRPGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       235 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      .+  ..+ +||||+++|+|.+++....
T Consensus        71 ~~--~~~-lv~e~~~~~~L~~~l~~~~   94 (307)
T 2eva_A           71 LN--PVC-LVMEYAEGGSLYNVLHGAE   94 (307)
T ss_dssp             TT--TTE-EEEECCTTCBHHHHHHCSS
T ss_pred             cC--CcE-EEEEcCCCCCHHHHHhccC
Confidence            63  356 9999999999999997654

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.13  E-value=4.7e-11  Score=105.83  Aligned_cols=89  Identities=22%  Similarity=0.240  Sum_probs=62.2

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCccceecc
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      .++|...+.||+|+||.||+             +... ++..||+|.+...... ... +.+|+.++..++||||++++ 
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~-   69 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYK-------------GLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLY-   69 (317)
T ss_dssp             ---------------CEEEE-------------EECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEE-
T ss_pred             ccceeEeeEECCCCCEEEEE-------------EEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEE-
Confidence            35677889999999999999             7654 5889999998754332 224 99999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +++...+..+ +||||++ |+|.+++..
T Consensus        70 ~~~~~~~~~~-lv~e~~~-~~L~~~l~~   95 (317)
T 2pmi_A           70 DVIHTENKLT-LVFEFMD-NDLKKYMDS   95 (317)
T ss_dssp             EEECCTTEEE-EEEECCC-CBHHHHHHH
T ss_pred             EEEEECCeEE-EEEEecC-CCHHHHHHh
Confidence            9998888888 9999999 699988753

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.13  E-value=5.8e-11  Score=103.90  Aligned_cols=88  Identities=18%  Similarity=0.163  Sum_probs=70.5

Q ss_pred             CccccceecccCccceeccccccccccccceee-----cCCCcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCcccee
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGA-----RIDARVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~-----~~~~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      .|...+.||+|+||.||+             +.     ...+..||+|.+...... ..+ +.+|+.++..++|+||+++
T Consensus        22 ~~~~~~~lg~G~~g~V~~-------------~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~   88 (302)
T 4e5w_A           22 FLKRIRDLGEGHFGKVEL-------------CRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY   88 (302)
T ss_dssp             GEEEEEEEEECSSEEEEE-------------EEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             hhhhhhccCCCCceEEEE-------------EEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeee
Confidence            467779999999999999             65     235789999999754322 234 9999999999999999999


Q ss_pred             ccceEeeC--CeEEEEEEecCCCCCccccccC
Q 043820          230 YPSVVIRP--GYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       230 ~~g~~~~~--~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      + +++...  ...+ +||||+++|+|.+++..
T Consensus        89 ~-~~~~~~~~~~~~-lv~e~~~~~~L~~~l~~  118 (302)
T 4e5w_A           89 K-GICTEDGGNGIK-LIMEFLPSGSLKEYLPK  118 (302)
T ss_dssp             E-EEEEC---CCEE-EEEECCTTCBHHHHHHH
T ss_pred             e-eEEecCCCceEE-EEEEeCCCCcHHHHHHh
Confidence            9 998776  4456 99999999999999854

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.13  E-value=2.9e-11  Score=107.69  Aligned_cols=90  Identities=14%  Similarity=0.105  Sum_probs=76.1

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhCCCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ++|...+.||+|+||.||+             +... ++..||+|.+....   ....+ +.+|..++..++||||++++
T Consensus         6 ~~y~~~~~lG~G~~g~V~~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~   72 (318)
T 1fot_A            6 QDFQILRTLGTGSFGRVHL-------------IRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMW   72 (318)
T ss_dssp             GGEEEEEEEEECSSCEEEE-------------EEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEE
T ss_pred             HHcEEEEEEeeCCCEEEEE-------------EEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEe
Confidence            5678889999999999999             7654 58999999986432   12233 88999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                       +++.+....+ +||||+++|+|.+++...
T Consensus        73 -~~~~~~~~~~-lv~e~~~gg~L~~~l~~~  100 (318)
T 1fot_A           73 -GTFQDAQQIF-MIMDYIEGGELFSLLRKS  100 (318)
T ss_dssp             -EEEECSSEEE-EEECCCCSCBHHHHHHHT
T ss_pred             -EEEEeCCEEE-EEEeCCCCCCHHHHHHHc
Confidence             9998888888 999999999999998643

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.13  E-value=9.4e-11  Score=103.12  Aligned_cols=89  Identities=24%  Similarity=0.302  Sum_probs=74.0

Q ss_pred             cCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCC---chhH-HHHHHHHhhhCCCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSV---TGIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~---~~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ++|...+.||+|+||.||+             +.. .++..||+|.+.....   .... +.+|+.++..++|+||++++
T Consensus        32 ~~y~~~~~lg~G~~g~Vy~-------------~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~   98 (310)
T 2wqm_A           32 ANFRIEKKIGRGQFSEVYR-------------AACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYY   98 (310)
T ss_dssp             GGEEEEEEEECC--CEEEE-------------EEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred             cceEEEEeecCCCCceEEE-------------EEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEE
Confidence            4688889999999999999             764 4689999999875322   1223 99999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                       +++...+..+ +||||+++|+|.+++..
T Consensus        99 -~~~~~~~~~~-lv~e~~~~~~L~~~l~~  125 (310)
T 2wqm_A           99 -ASFIEDNELN-IVLELADAGDLSRMIKH  125 (310)
T ss_dssp             -EEEEETTEEE-EEEECCCSCBHHHHHHH
T ss_pred             -EEEEcCCcEE-EEEecCCCCCHHHHHHH
Confidence             9999988888 99999999999998853

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.13  E-value=6.2e-11  Score=106.71  Aligned_cols=89  Identities=13%  Similarity=0.068  Sum_probs=74.9

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc---hhH-HHHHHHHhhhC-CCCcccee
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT---GIF-FARSVTEVAKI-YARSRPRS  229 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~---~~~-f~~e~~~l~~l-~H~nlv~l  229 (282)
                      ++|...+.||+|+||.||+             +... ++..||+|.+......   ..+ +.+|..++.++ +|||||++
T Consensus         9 ~~y~~~~~lG~G~fg~V~~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l   75 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLL-------------VRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL   75 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEE-------------EEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCE
T ss_pred             hheEEEEEEEecCCeEEEE-------------EEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeE
Confidence            4677889999999999999             7755 5789999999754322   223 88999999988 89999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      + +++......+ +||||+++|+|.+++..
T Consensus        76 ~-~~~~~~~~~~-lv~e~~~gg~L~~~l~~  103 (345)
T 3a8x_A           76 H-SCFQTESRLF-FVIEYVNGGDLMFHMQR  103 (345)
T ss_dssp             E-EEEECSSEEE-EEECCCCSCBHHHHHHH
T ss_pred             E-EEEEeCCEEE-EEEeCCCCCcHHHHHHH
Confidence            9 9998888888 99999999999998864

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.12  E-value=5e-11  Score=103.84  Aligned_cols=98  Identities=18%  Similarity=0.224  Sum_probs=76.0

Q ss_pred             cCccccc-eecccCccceeccccccccccccceeecC---CCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCcccee
Q 043820          156 DNFSINN-KLGEGGFGPVYKVVAAGICFAGTITGARI---DARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       156 ~~f~~~~-~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~---~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      +++.... .||+|+||.||+             +...   .+..||+|.+....... .+ +.+|+.++..++||||+++
T Consensus         9 ~~~~i~~~~lg~G~~g~Vy~-------------~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~   75 (287)
T 1u59_A            9 DNLLIADIELGCGNFGSVRQ-------------GVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRL   75 (287)
T ss_dssp             GGEEEEEEEEECCTTEEEEE-------------EEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             HHhhhhhccccccCceeEEE-------------eEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEE
Confidence            3444445 899999999999             7643   46789999997654332 33 9999999999999999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      + +++ ..+..+ +||||+++|+|.+++....  ..+++...
T Consensus        76 ~-~~~-~~~~~~-lv~e~~~~~~L~~~l~~~~--~~~~~~~~  112 (287)
T 1u59_A           76 I-GVC-QAEALM-LVMEMAGGGPLHKFLVGKR--EEIPVSNV  112 (287)
T ss_dssp             E-EEE-ESSSEE-EEEECCTTEEHHHHHTTCT--TTSCHHHH
T ss_pred             E-EEe-cCCCcE-EEEEeCCCCCHHHHHHhCC--ccCCHHHH
Confidence            9 988 555667 9999999999999996543  23555443

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.12  E-value=7.9e-11  Score=103.57  Aligned_cols=90  Identities=16%  Similarity=0.159  Sum_probs=76.3

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch--hH-HHHHHHHhhhCCCCccceecc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG--IF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      ++|...+.||+|+||.||+             +... ++..||+|.+.......  .+ +.+|+.++.+++|+||++++ 
T Consensus         3 ~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~-   68 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFK-------------CRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLL-   68 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEE-------------EEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEE-
T ss_pred             ccceEeeEEeecCCeEEEE-------------EEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchh-
Confidence            4677889999999999999             7765 48899999886543332  23 89999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +++...+..+ +||||+++++|.+++...
T Consensus        69 ~~~~~~~~~~-lv~e~~~~~~l~~~~~~~   96 (311)
T 4agu_A           69 EVFRRKRRLH-LVFEYCDHTVLHELDRYQ   96 (311)
T ss_dssp             EEEEETTEEE-EEEECCSEEHHHHHHHTS
T ss_pred             heeecCCeEE-EEEEeCCCchHHHHHhhh
Confidence            9999888888 999999999999887643

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.12  E-value=1e-10  Score=103.63  Aligned_cols=92  Identities=15%  Similarity=0.115  Sum_probs=71.7

Q ss_pred             ccccceecccCccceeccccccccccccceee-cCCCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCccceeccceE
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGA-RIDARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRSYPSVV  234 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~-~~~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l~~g~~  234 (282)
                      |...+.||+|+||.||++...         +. ..++..||+|.+....... .+ |.+|+.++..++|+||++++ +++
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~---------~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~-~~~  102 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYD---------PTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYK-GCC  102 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEEC---------SCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEE-EEE
T ss_pred             HhhhheecCCCCeEEEEEEEc---------cCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEE-EEE
Confidence            477799999999999872111         11 1257899999997654333 33 99999999999999999999 998


Q ss_pred             eeC--CeEEEEEEecCCCCCccccccCC
Q 043820          235 IRP--GYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       235 ~~~--~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ...  ...+ +||||+++|+|.+++...
T Consensus       103 ~~~~~~~~~-lv~e~~~~~~L~~~l~~~  129 (318)
T 3lxp_A          103 EDAGAASLQ-LVMEYVPLGSLRDYLPRH  129 (318)
T ss_dssp             EETTTTEEE-EEECCCTTCBHHHHGGGS
T ss_pred             ecCCCceEE-EEEecccCCcHHHHHhhC
Confidence            874  4456 999999999999998643

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.12  E-value=6e-11  Score=103.69  Aligned_cols=91  Identities=16%  Similarity=0.154  Sum_probs=72.5

Q ss_pred             cCccccceecccCccceeccccccccccccceeecCC----CcEEEEEEccCCCCchh-H-HHHHHHHhhhCCCCcccee
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARID----ARVVAARIVFAGSVTGI-F-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~----~~~vAvK~l~~~~~~~~-~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      ..|...+.||+|+||.||+             +...+    ...+|+|.+........ + |.+|+.++.+++|+||+++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~-------------~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   91 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYH-------------GTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL   91 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEE-------------EEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCC
T ss_pred             eehhhcceeeecCCceEEE-------------EEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeee
Confidence            3466779999999999999             76432    34689999876443333 3 9999999999999999999


Q ss_pred             ccceEeeCC-eEEEEEEecCCCCCccccccCCC
Q 043820          230 YPSVVIRPG-YKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       230 ~~g~~~~~~-~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      + +++...+ ..+ +||||+++|+|.+++....
T Consensus        92 ~-~~~~~~~~~~~-~v~e~~~~~~L~~~l~~~~  122 (298)
T 3f66_A           92 L-GICLRSEGSPL-VVLPYMKHGDLRNFIRNET  122 (298)
T ss_dssp             C-EEECCSSSCCE-EEEECCTTCBHHHHHHCTT
T ss_pred             e-eEEEcCCCceE-EEEeCCCCCCHHHHHHhcc
Confidence            9 9876654 455 9999999999999997543

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.12  E-value=8e-11  Score=102.04  Aligned_cols=89  Identities=20%  Similarity=0.186  Sum_probs=75.6

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc------hhH-HHHHHHHhhhCCCCccc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT------GIF-FARSVTEVAKIYARSRP  227 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~------~~~-f~~e~~~l~~l~H~nlv  227 (282)
                      ++|...+.||+|+||.||+             +... ++..||+|.+......      ..+ |.+|+.++..++||||+
T Consensus         5 ~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~   71 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRK-------------CRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII   71 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEE-------------EEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBC
T ss_pred             hhhhhHHhhcccCceEEEE-------------EEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCee
Confidence            3577789999999999999             7655 5889999988643221      234 99999999999999999


Q ss_pred             eeccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          228 RSYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       228 ~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +++ +++......+ +||||+++++|.+++..
T Consensus        72 ~~~-~~~~~~~~~~-lv~e~~~~~~L~~~l~~  101 (283)
T 3bhy_A           72 TLH-DIFENKTDVV-LILELVSGGELFDFLAE  101 (283)
T ss_dssp             CEE-EEEECSSEEE-EEEECCCSCBHHHHHHH
T ss_pred             ehh-heecCCCeEE-EEEeecCCCcHHHHHHh
Confidence            999 9999888888 99999999999999854

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.12  E-value=7.4e-11  Score=104.60  Aligned_cols=90  Identities=21%  Similarity=0.151  Sum_probs=76.5

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc------hhH-HHHHHHHhhhCCCCccc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT------GIF-FARSVTEVAKIYARSRP  227 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~------~~~-f~~e~~~l~~l~H~nlv  227 (282)
                      +.|...+.||+|+||.||+             +... ++..||+|.+......      ..+ +.+|+.++..++||||+
T Consensus        12 ~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv   78 (321)
T 2a2a_A           12 DFYDIGEELGSGQFAIVKK-------------CREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI   78 (321)
T ss_dssp             HHEEEEEEEEECSSEEEEE-------------EEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBC
T ss_pred             ccEEEeeEeeecCCEEEEE-------------EEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcc
Confidence            4577889999999999999             7654 5889999998653321      234 99999999999999999


Q ss_pred             eeccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          228 RSYPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       228 ~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +++ +++......+ +||||+++|+|.+++...
T Consensus        79 ~~~-~~~~~~~~~~-lv~e~~~~~~L~~~l~~~  109 (321)
T 2a2a_A           79 TLH-DVYENRTDVV-LILELVSGGELFDFLAQK  109 (321)
T ss_dssp             CEE-EEEECSSEEE-EEECCCCSCBHHHHHHTC
T ss_pred             eEE-EEEecCCEEE-EEEEcCCCCcHHHHHHhc
Confidence            999 9998888888 999999999999998653

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.12  E-value=4.9e-11  Score=105.21  Aligned_cols=91  Identities=16%  Similarity=0.085  Sum_probs=73.4

Q ss_pred             hccCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceecc
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      ..++|...+.||+|+||.||+             +.. .++..||+|.+........+ +.+|+.++..++|+||++++ 
T Consensus        27 ~~~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~-   92 (317)
T 2buj_A           27 DNKHYLFIQKLGEGGFSYVDL-------------VEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLV-   92 (317)
T ss_dssp             TTEEEEEEEEEEC--CEEEEE-------------EEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCC-
T ss_pred             CCeEEEEEEEecCCCCeEEEE-------------EEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEE-
Confidence            345688889999999999999             765 46899999998654444445 99999999999999999999 


Q ss_pred             ceEee----CCeEEEEEEecCCCCCccccccC
Q 043820          232 SVVIR----PGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       232 g~~~~----~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +++..    ....+ +||||+++|+|.+++..
T Consensus        93 ~~~~~~~~~~~~~~-lv~e~~~~~~L~~~l~~  123 (317)
T 2buj_A           93 AYCLRERGAKHEAW-LLLPFFKRGTLWNEIER  123 (317)
T ss_dssp             EEEEEEETTEEEEE-EEEECCTTCBHHHHHHH
T ss_pred             EEEEeccCCCceeE-EEEEeCCCCcHHHHHHH
Confidence            98863    23455 99999999999998864

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.12  E-value=1.2e-10  Score=102.09  Aligned_cols=90  Identities=20%  Similarity=0.253  Sum_probs=76.9

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCccceecc
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      .+.|...+.||+|+||.||+             +... ++..||+|.+...... ..+ +.+|+.++..++|+||++++ 
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~-   86 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFK-------------GIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY-   86 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEE-------------EEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEE-
T ss_pred             HHHHHHhhhhcccCCeEEEE-------------EEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEE-
Confidence            34578889999999999999             7643 5889999998754433 234 99999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +++......+ +||||+++|+|.+++..
T Consensus        87 ~~~~~~~~~~-lv~e~~~~~~L~~~~~~  113 (303)
T 3a7i_A           87 GSYLKDTKLW-IIMEYLGGGSALDLLEP  113 (303)
T ss_dssp             EEEEETTEEE-EEEECCTTEEHHHHHTT
T ss_pred             EEEecCCeEE-EEEEeCCCCcHHHHHhc
Confidence            9999888888 99999999999999854

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.12  E-value=8.9e-11  Score=101.54  Aligned_cols=102  Identities=16%  Similarity=0.195  Sum_probs=79.2

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch--hH-HHHHHHHhhhCCCCccceec
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG--IF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      .++|...+.||+|+||.||+             +... ++..||+|.+.......  .+ +.+|+.++.+++|+||++++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~   71 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQK-------------IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY   71 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEE-------------EEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             hhheeeehhccCCCCcEEEE-------------EEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEE
Confidence            35678889999999999999             7654 58899999997543322  23 99999999999999999999


Q ss_pred             cceEee--CCeEEEEEEecCCCCCccccccCCCC-CcCCCCCcc
Q 043820          231 PSVVIR--PGYKVGLILELKPDPDPNPDRLHSSR-VRSLQYPDP  271 (282)
Q Consensus       231 ~g~~~~--~~~~~~lv~Ey~~~GsL~~~l~~~~~-~~~l~W~~R  271 (282)
                       +++..  ....+ +||||+++|+|.+++..... ...++|...
T Consensus        72 -~~~~~~~~~~~~-lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~  113 (279)
T 2w5a_A           72 -DRIIDRTNTTLY-IVMEYCEGGDLASVITKGTKERQYLDEEFV  113 (279)
T ss_dssp             -EEEEEGGGTEEE-EEEECCTTEEHHHHHHHHHHTTCCCCHHHH
T ss_pred             -EEEecCCCceEE-EEEeCCCCCCHHHHHHhhcccCCCCCHHHH
Confidence             98754  45566 99999999999999864321 223555443

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.12  E-value=7.9e-11  Score=105.97  Aligned_cols=105  Identities=14%  Similarity=0.154  Sum_probs=82.8

Q ss_pred             CHHHHHHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCch-----------hH-HHHH
Q 043820          147 ELATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTG-----------IF-FARS  214 (282)
Q Consensus       147 ~~~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~-----------~~-f~~e  214 (282)
                      ...++....++|...+.||+|+||.||+             +...++..||+|.+.......           .+ +.+|
T Consensus        13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E   79 (362)
T 3pg1_A           13 LIAELHAMQSPYTVQRFISSGSYGAVCA-------------GVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLRE   79 (362)
T ss_dssp             HHHHHHHTTCSCEEEEEEEEETTEEEEE-------------EECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHH
T ss_pred             HHHHHHHhccceEEeEEeccCCCEEEEE-------------EECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHH
Confidence            3567888899999999999999999999             877778999999886432211           14 9999


Q ss_pred             HHHhhhCCCCccceeccceEeeCC-----eEEEEEEecCCCCCccccccCCCCCcCCCCC
Q 043820          215 VTEVAKIYARSRPRSYPSVVIRPG-----YKVGLILELKPDPDPNPDRLHSSRVRSLQYP  269 (282)
Q Consensus       215 ~~~l~~l~H~nlv~l~~g~~~~~~-----~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~  269 (282)
                      +.++..++||||++++ +++...+     ..+ +||||++ |+|.+++....  ..+++.
T Consensus        80 ~~~l~~l~h~~iv~~~-~~~~~~~~~~~~~~~-lv~e~~~-~~l~~~~~~~~--~~~~~~  134 (362)
T 3pg1_A           80 IRLLNHFHHPNILGLR-DIFVHFEEPAMHKLY-LVTELMR-TDLAQVIHDQR--IVISPQ  134 (362)
T ss_dssp             HHHHHHCCCTTBCCCS-EEEEECCTTTCCEEE-EEEECCS-EEHHHHHHCTT--SCCCHH
T ss_pred             HHHHHhCCCcCcccee-eeEEeccCCCcceEE-EEEccCC-CCHHHHHHhcc--cCCCHH
Confidence            9999999999999999 9885422     345 9999999 68888887543  234444

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.12  E-value=3.1e-11  Score=110.43  Aligned_cols=90  Identities=12%  Similarity=0.126  Sum_probs=76.2

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhCCCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ++|...+.||+|+||.||+             +... .+..||+|.+....   ....+ +.+|+.+|..++|||||+++
T Consensus        15 ~~y~i~~~LG~G~fG~V~~-------------~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~   81 (384)
T 4fr4_A           15 DHFEILRAIGKGSFGKVCI-------------VQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLW   81 (384)
T ss_dssp             GGEEEEEEEECCTTCCEEE-------------EEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred             HHeEEEEEEeeCCCeEEEE-------------EEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEE
Confidence            4678889999999999999             7654 57899999986432   12233 89999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                       +++......+ +||||+++|+|.+++...
T Consensus        82 -~~~~~~~~~~-lv~e~~~gg~L~~~l~~~  109 (384)
T 4fr4_A           82 -YSFQDEEDMF-MVVDLLLGGDLRYHLQQN  109 (384)
T ss_dssp             -EEEECSSEEE-EEECCCTTEEHHHHHHTT
T ss_pred             -EEEEeCCEEE-EEEecCCCCcHHHHHHhc
Confidence             9998888888 999999999999998754

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.12  E-value=4e-11  Score=109.18  Aligned_cols=89  Identities=17%  Similarity=0.204  Sum_probs=71.6

Q ss_pred             ccccceecccCccceeccccccccccccceeecC--C--CcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCccceecc
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI--D--ARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~--~--~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      |...+.||+|+||.||+             +...  +  +..||+|.+....... .+ |.+|+.++.+++||||++++ 
T Consensus        91 ~~~~~~LG~G~fg~Vy~-------------~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~-  156 (373)
T 3c1x_A           91 VHFNEVIGRGHFGCVYH-------------GTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL-  156 (373)
T ss_dssp             EEEEEEEECCSSSEEEE-------------EEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCC-
T ss_pred             eecCcEeeeCCCeEEEE-------------EEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEE-
Confidence            45568999999999999             7643  2  2468999987544333 34 99999999999999999999 


Q ss_pred             ceEeeCC-eEEEEEEecCCCCCccccccCCC
Q 043820          232 SVVIRPG-YKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       232 g~~~~~~-~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      +++...+ ..+ +||||+++|+|.+++....
T Consensus       157 ~~~~~~~~~~~-lv~e~~~~g~L~~~l~~~~  186 (373)
T 3c1x_A          157 GICLRSEGSPL-VVLPYMKHGDLRNFIRNET  186 (373)
T ss_dssp             EEECCCSSCCE-EEEECCTTCBHHHHHHCTT
T ss_pred             EEEEcCCCCeE-EEEECCCCCCHHHHHhhcc
Confidence            9886654 556 9999999999999997543

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.11  E-value=6.8e-11  Score=108.63  Aligned_cols=90  Identities=14%  Similarity=0.070  Sum_probs=74.7

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc---hhH-HHHHHHHhhhC-CCCccce
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT---GIF-FARSVTEVAKI-YARSRPR  228 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~---~~~-f~~e~~~l~~l-~H~nlv~  228 (282)
                      .++|...+.||+|+||.||+             +... .+..||+|.+......   ..+ +.+|..++.++ +|||||+
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~-------------~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~  117 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLL-------------VRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG  117 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEE-------------EEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCC
T ss_pred             hhHcEEEEEEeeCCCeEEEE-------------EEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCe
Confidence            35688889999999999999             7755 4789999999754322   223 88999998877 8999999


Q ss_pred             eccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          229 SYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       229 l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ++ +++.+.+..+ +||||+++|+|..++..
T Consensus       118 l~-~~~~~~~~~~-lV~E~~~gg~L~~~l~~  146 (396)
T 4dc2_A          118 LH-SCFQTESRLF-FVIEYVNGGDLMFHMQR  146 (396)
T ss_dssp             EE-EEEECSSEEE-EEEECCTTCBHHHHHHH
T ss_pred             eE-EEEEECCEEE-EEEEcCCCCcHHHHHHH
Confidence            99 9998888888 99999999999988864

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.11  E-value=6.8e-11  Score=103.15  Aligned_cols=89  Identities=18%  Similarity=0.184  Sum_probs=75.0

Q ss_pred             cCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCch--hH-HHHHHHHhhhCCCCccceeccc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTG--IF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      ++|...+.||+|+||.||+             +....+..||+|.+.......  .. +.+|+.++..++||||++++ +
T Consensus         2 ~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~-~   67 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYK-------------AQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY-D   67 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEE-------------EEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEE-E
T ss_pred             ccchhhhhcccCCCEEEEE-------------EEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeee-e
Confidence            4577789999999999999             877678999999986543222  23 89999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ++...+..+ +||||+++ +|.+++...
T Consensus        68 ~~~~~~~~~-lv~e~~~~-~l~~~~~~~   93 (288)
T 1ob3_A           68 VIHTKKRLV-LVFEHLDQ-DLKKLLDVC   93 (288)
T ss_dssp             EEECSSCEE-EEEECCSE-EHHHHHHTS
T ss_pred             EEccCCeEE-EEEEecCC-CHHHHHHhc
Confidence            998888888 99999995 888888653

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.11  E-value=6.1e-11  Score=105.89  Aligned_cols=99  Identities=17%  Similarity=0.149  Sum_probs=77.9

Q ss_pred             cCccccceecccCccceeccccccccccccceeecCC-----CcEEEEEEccCCCCchh-H-HHHHHHHhhhCCCCccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARID-----ARVVAARIVFAGSVTGI-F-FARSVTEVAKIYARSRPR  228 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~-----~~~vAvK~l~~~~~~~~-~-f~~e~~~l~~l~H~nlv~  228 (282)
                      ..|...+.||+|+||.||+             +....     +..||+|.+........ . |.+|+.++..++|+||++
T Consensus        44 ~~~~~~~~lG~G~~g~Vy~-------------~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~  110 (333)
T 1mqb_A           44 SCVTRQKVIGAGEFGEVYK-------------GMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIR  110 (333)
T ss_dssp             TTEEEEEEEEECSSSEEEE-------------EEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCC
T ss_pred             HHhhcccEEecCCCeEEEE-------------EEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCc
Confidence            3455678999999999999             65432     34699999975443333 3 999999999999999999


Q ss_pred             eccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          229 SYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       229 l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      ++ |++...+..+ +||||+++|+|.+++....  ..++|..+
T Consensus       111 ~~-~~~~~~~~~~-lv~e~~~~~~L~~~l~~~~--~~~~~~~~  149 (333)
T 1mqb_A          111 LE-GVISKYKPMM-IITEYMENGALDKFLREKD--GEFSVLQL  149 (333)
T ss_dssp             EE-EEECSSSSEE-EEEECCTTEEHHHHHHHTT--TCSCHHHH
T ss_pred             EE-EEEecCCCcE-EEEeCCCCCcHHHHHHhCC--CCCCHHHH
Confidence            99 9998888888 9999999999999996532  23555443

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.11  E-value=7.3e-11  Score=104.85  Aligned_cols=99  Identities=17%  Similarity=0.187  Sum_probs=78.0

Q ss_pred             cCccccceecccCccceeccccccccccccceee-----cCCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCcccee
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGA-----RIDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~-----~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      ++|...+.||+|+||.||+             +.     ..++..||+|.+........+ |.+|+.++..++|+||+++
T Consensus        41 ~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~  107 (326)
T 2w1i_A           41 RHLKFLQQLGKGNFGSVEM-------------CRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY  107 (326)
T ss_dssp             GGEEEEEEEECCSSEEEEE-------------EEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             HHceeeeeeccCCCeEEEE-------------EEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeE
Confidence            4577779999999999999             65     235789999999765544455 9999999999999999999


Q ss_pred             ccceEeeCC--eEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          230 YPSVVIRPG--YKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       230 ~~g~~~~~~--~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      + +++...+  ..+ +||||+++|+|.+++....  ..++|...
T Consensus       108 ~-~~~~~~~~~~~~-lv~e~~~~~~L~~~l~~~~--~~~~~~~~  147 (326)
T 2w1i_A          108 K-GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHK--ERIDHIKL  147 (326)
T ss_dssp             E-EEECC----CCE-EEECCCTTCBHHHHHHHST--TSSCHHHH
T ss_pred             E-EEEEecCCCceE-EEEECCCCCCHHHHHHhcc--cCCCHHHH
Confidence            9 9886644  456 9999999999999996543  23555443

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.11  E-value=4.8e-11  Score=107.71  Aligned_cols=89  Identities=13%  Similarity=0.055  Sum_probs=75.7

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhCCCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ++|...+.||+|+||.||+             +... ++..||+|.+....   ....+ +.+|+.++..++||||++++
T Consensus        41 ~~y~~~~~lG~G~~g~V~~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~  107 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVML-------------VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE  107 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEE-------------EEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred             HHCEEEEEeecCcCcEEEE-------------EEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence            4678889999999999999             7654 58899999986432   12233 89999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                       +++.+....+ +||||+++|+|.+++..
T Consensus       108 -~~~~~~~~~~-lv~e~~~gg~L~~~l~~  134 (350)
T 1rdq_E          108 -FSFKDNSNLY-MVMEYVAGGEMFSHLRR  134 (350)
T ss_dssp             -EEEECSSEEE-EEEECCTTCBHHHHHHH
T ss_pred             -EEEEcCCEEE-EEEcCCCCCcHHHHHHH
Confidence             9998888888 99999999999999864

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.11  E-value=4.9e-11  Score=112.15  Aligned_cols=90  Identities=17%  Similarity=0.246  Sum_probs=76.7

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC---chhH-HHHHHHHhhhCCCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV---TGIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~---~~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ++|...+.||+|+||.||+             +... +|..||+|.+.....   .... +.+|+.++..++||||++++
T Consensus        16 ~~Y~l~~~LG~G~fg~V~~-------------a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~   82 (476)
T 2y94_A           16 GHYILGDTLGVGTFGKVKV-------------GKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLY   82 (476)
T ss_dssp             TTEEEEEEEECCSSSCEEE-------------EEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred             cCEEEEEEEeeCCCeEEEE-------------EEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEE
Confidence            5677889999999999999             7654 689999999864321   1233 89999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                       +++...+..+ +||||+++|+|.+++...
T Consensus        83 -~~~~~~~~~~-lv~E~~~gg~L~~~l~~~  110 (476)
T 2y94_A           83 -QVISTPSDIF-MVMEYVSGGELFDYICKN  110 (476)
T ss_dssp             -EEEECSSEEE-EEEECCSSEEHHHHTTSS
T ss_pred             -EEEEECCEEE-EEEeCCCCCcHHHHHHhc
Confidence             9999888888 999999999999999653

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.11  E-value=2.6e-11  Score=107.03  Aligned_cols=90  Identities=18%  Similarity=0.192  Sum_probs=73.7

Q ss_pred             ccCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCch---hH-HHHHHHHhhhCCCCcccee
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVTG---IF-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~~---~~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      .+.|...+.||+|+||.||+             +.. .++..||+|.+.......   .. |.+|+.++.+++||||+++
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~   77 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHL-------------ARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV   77 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEE-------------EEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCE
T ss_pred             cCcEEEEEEEccCCCEEEEE-------------EEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceE
Confidence            35688889999999999999             764 468899999997643322   23 8999999999999999999


Q ss_pred             ccceEeeCCe----EEEEEEecCCCCCccccccC
Q 043820          230 YPSVVIRPGY----KVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       230 ~~g~~~~~~~----~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      + +++.....    .+ +||||+++|+|.+++..
T Consensus        78 ~-~~~~~~~~~~~~~~-lv~e~~~g~~L~~~l~~  109 (311)
T 3ork_A           78 Y-DTGEAETPAGPLPY-IVMEYVDGVTLRDIVHT  109 (311)
T ss_dssp             E-EEEEEEETTEEEEE-EEEECCCEEEHHHHHHH
T ss_pred             E-EeeeccCCCCcccE-EEEecCCCCCHHHHHHh
Confidence            9 98765432    26 99999999999999864

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.10  E-value=1.3e-10  Score=109.70  Aligned_cols=91  Identities=12%  Similarity=0.123  Sum_probs=74.0

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC-------------chhH-HHHHHHHh
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV-------------TGIF-FARSVTEV  218 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~-------------~~~~-f~~e~~~l  218 (282)
                      ..+.|...+.||+|+||.||+             +... .+..||+|.+.....             ...+ +.+|+.+|
T Consensus        34 i~~~Y~~~~~lG~G~~g~V~~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l  100 (504)
T 3q5i_A           34 IGESYFKVRKLGSGAYGEVLL-------------CKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLL  100 (504)
T ss_dssp             GGGTEEEEEEEEC--CEEEEE-------------EEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHH
T ss_pred             cccceEEEeEecccCCeEEEE-------------EEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHH
Confidence            346688889999999999999             7754 478999999865321             1234 89999999


Q ss_pred             hhCCCCccceeccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          219 AKIYARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       219 ~~l~H~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ..++|||||+++ +++..+...+ +||||+++|+|.+++..
T Consensus       101 ~~l~hpniv~~~-~~~~~~~~~~-lv~e~~~gg~L~~~l~~  139 (504)
T 3q5i_A          101 KSLDHPNIIKLF-DVFEDKKYFY-LVTEFYEGGELFEQIIN  139 (504)
T ss_dssp             HTCCCTTBCCEE-EEEECSSEEE-EEEECCTTCBHHHHHHH
T ss_pred             HhCCCCCCCeEE-EEEEcCCEEE-EEEecCCCCcHHHHHHH
Confidence            999999999999 9999888888 99999999999988854

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.10  E-value=4e-11  Score=104.77  Aligned_cols=92  Identities=10%  Similarity=0.089  Sum_probs=64.2

Q ss_pred             HHhccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCccce
Q 043820          152 ANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPR  228 (282)
Q Consensus       152 ~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~  228 (282)
                      ....++|...+.||+|+||.||+             +... ++..||+|.+...... ..+ +.+|+.++..++||||++
T Consensus        11 ~i~~~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   77 (303)
T 2vwi_A           11 SINRDDYELQEVIGSGATAVVQA-------------AYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVS   77 (303)
T ss_dssp             --CCCCCEEEEECC---CCCEEE-------------EEC----CEEEEECCC----------------CCCCCCCTTBCC
T ss_pred             ccchhhhhhhheeccccceEEEE-------------EEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEee
Confidence            34457788889999999999999             7654 5789999998654322 233 999999999999999999


Q ss_pred             eccceEeeCCeEEEEEEecCCCCCcccccc
Q 043820          229 SYPSVVIRPGYKVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       229 l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~  258 (282)
                      ++ +++...+..+ +||||+++|+|.+++.
T Consensus        78 ~~-~~~~~~~~~~-lv~e~~~~~~L~~~l~  105 (303)
T 2vwi_A           78 YY-TSFVVKDELW-LVMKLLSGGSVLDIIK  105 (303)
T ss_dssp             EE-EEEESSSCEE-EEEECCTTCBHHHHHH
T ss_pred             EE-EEEeecCCcE-EEehhccCCchHHHHH
Confidence            99 9999888888 9999999999999986

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.10  E-value=6.6e-11  Score=106.94  Aligned_cols=91  Identities=14%  Similarity=0.140  Sum_probs=75.2

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhC-CCCccc
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKI-YARSRP  227 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l-~H~nlv  227 (282)
                      ..++|...+.||+|+||.||+             +... ++..||+|.+....   ....+ +.+|..++..+ +||||+
T Consensus        21 ~~~~y~~~~~lG~G~fg~V~~-------------~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv   87 (353)
T 3txo_A           21 GIDNFEFIRVLGKGSFGKVML-------------ARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLT   87 (353)
T ss_dssp             --CCEEEEEEEEEETTEEEEE-------------EEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBC
T ss_pred             chhheEEEEEEeeCCCEEEEE-------------EEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCcee
Confidence            346788889999999999999             7654 58899999986432   12233 88999999988 799999


Q ss_pred             eeccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          228 RSYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       228 ~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +++ +++...+..+ +||||+++|+|.+++..
T Consensus        88 ~l~-~~~~~~~~~~-lv~E~~~gg~L~~~l~~  117 (353)
T 3txo_A           88 QLF-CCFQTPDRLF-FVMEFVNGGDLMFHIQK  117 (353)
T ss_dssp             CEE-EEEECSSEEE-EEEECCCSCBHHHHHHH
T ss_pred             eEE-EEEEeCCEEE-EEEeCCCCCcHHHHHHH
Confidence            999 9998888888 99999999999998864

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.10  E-value=7.4e-11  Score=106.34  Aligned_cols=93  Identities=11%  Similarity=0.078  Sum_probs=75.9

Q ss_pred             HHhccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhC-CCCc
Q 043820          152 ANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKI-YARS  225 (282)
Q Consensus       152 ~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l-~H~n  225 (282)
                      ....++|...+.||+|+||.||+             +... ++..||+|.++...   ....+ +..|..++..+ +|||
T Consensus        13 ~~~~~~y~~~~~lG~G~fg~V~~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~   79 (345)
T 1xjd_A           13 KLKIEDFILHKMLGKGSFGKVFL-------------AEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPF   79 (345)
T ss_dssp             ---CTTEEEEEEEEECSSSEEEE-------------EEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTT
T ss_pred             CCChHHeEEEEEEeeCCCeEEEE-------------EEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCC
Confidence            34567889999999999999999             7754 58899999996532   12233 88899988876 9999


Q ss_pred             cceeccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          226 RPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       226 lv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      |++++ +++.+.+..+ +||||+++|+|.++|..
T Consensus        80 iv~l~-~~~~~~~~~~-lv~E~~~gg~L~~~l~~  111 (345)
T 1xjd_A           80 LTHMF-CTFQTKENLF-FVMEYLNGGDLMYHIQS  111 (345)
T ss_dssp             BCCEE-EEEECSSEEE-EEEECCTTCBHHHHHHH
T ss_pred             CCcEE-EEEEeCCEEE-EEEeCCCCCcHHHHHHH
Confidence            99999 9998888888 99999999999998864

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.10  E-value=4.3e-11  Score=103.71  Aligned_cols=91  Identities=23%  Similarity=0.314  Sum_probs=76.0

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc---hhH-HHHHHHHhhhCCCCccce
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT---GIF-FARSVTEVAKIYARSRPR  228 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~---~~~-f~~e~~~l~~l~H~nlv~  228 (282)
                      +.++|...+.||+|+||.||+             +... ++..||+|.+......   ... +.+|+.++..++||||++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   73 (279)
T 3fdn_A            7 ALEDFEIGRPLGKGKFGNVYL-------------AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR   73 (279)
T ss_dssp             CGGGEEEEEEEEECSSEEEEE-------------EEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCC
T ss_pred             ecccEEEeeEEecCCCeEEEE-------------EEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcc
Confidence            345688889999999999999             7654 4779999998543211   223 899999999999999999


Q ss_pred             eccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          229 SYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       229 l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ++ +++......+ +||||+++|+|.+++..
T Consensus        74 ~~-~~~~~~~~~~-lv~e~~~~~~l~~~l~~  102 (279)
T 3fdn_A           74 LY-GYFHDATRVY-LILEYAPLGTVYRELQK  102 (279)
T ss_dssp             EE-EEEECSSEEE-EEECCCTTEEHHHHHHH
T ss_pred             hh-heEecCCEEE-EEEecCCCCcHHHHHHh
Confidence            99 9998888888 99999999999988854

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.09  E-value=9.9e-11  Score=110.25  Aligned_cols=89  Identities=16%  Similarity=0.151  Sum_probs=71.6

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC--CchhH-HHHHHHHhhhCCCCccceecc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS--VTGIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~--~~~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      +.|...+.||+|+||.||+             +... .+..||+|.+....  ..... +.+|+.++..++|||||+++ 
T Consensus        37 ~~y~~~~~lG~G~~g~V~~-------------~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~-  102 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLL-------------CRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLY-  102 (494)
T ss_dssp             HHEEEEEEEECC---EEEE-------------EEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEE-
T ss_pred             cCeEEeeEEecCCCEEEEE-------------EEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEE-
Confidence            3477789999999999999             7654 57899999987543  22234 99999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +++......+ +||||+++|+|.+++..
T Consensus       103 ~~~~~~~~~~-lv~e~~~~g~L~~~~~~  129 (494)
T 3lij_A          103 DFFEDKRNYY-LVMECYKGGELFDEIIH  129 (494)
T ss_dssp             EEEECSSEEE-EEEECCCSCBHHHHHHH
T ss_pred             EEEEeCCEEE-EEEecCCCCcHHHHHHH
Confidence            9999888888 99999999999887754

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.09  E-value=7.8e-11  Score=101.72  Aligned_cols=89  Identities=17%  Similarity=0.237  Sum_probs=75.9

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhCCCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ++|...+.||+|+||.||+             +... ++..||+|.+....   ....+ +.+|+..+..++|+||++++
T Consensus        11 ~~y~i~~~lg~G~~g~V~~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~   77 (276)
T 2h6d_A           11 GHYVLGDTLGVGTFGKVKI-------------GEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLY   77 (276)
T ss_dssp             TTEEEEEEEEECSSEEEEE-------------EEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred             ccEEEEeeecCCCCeEEEE-------------EEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEE
Confidence            5678889999999999999             7755 68899999986432   12233 89999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                       +++...+..+ +||||+++++|.+++..
T Consensus        78 -~~~~~~~~~~-lv~e~~~~~~L~~~l~~  104 (276)
T 2h6d_A           78 -QVISTPTDFF-MVMEYVSGGELFDYICK  104 (276)
T ss_dssp             -EEEECSSEEE-EEEECCCSCBHHHHHHH
T ss_pred             -EEEecCCeEE-EEEeccCCCcHHHHHhc
Confidence             9998888888 99999999999999864

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.09  E-value=5.1e-11  Score=103.50  Aligned_cols=100  Identities=17%  Similarity=0.148  Sum_probs=77.4

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecC----CCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCccc
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI----DARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRP  227 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~----~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv  227 (282)
                      ..++|...+.||+|+||.||+             +...    .+..||+|.+....... .+ |.+|+.++.+++||||+
T Consensus        13 ~~~~y~~~~~lg~G~~g~Vy~-------------~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv   79 (281)
T 1mp8_A           13 QRERIELGRCIGEGQFGDVHQ-------------GIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV   79 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEE-------------EEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBC
T ss_pred             ehHHeEEEeEeeecCCeeEEE-------------EEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccc
Confidence            345677889999999999999             6543    24679999987543333 33 99999999999999999


Q ss_pred             eeccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          228 RSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       228 ~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      +++ +++. .+..+ +||||+++|+|.+++....  ..++|...
T Consensus        80 ~~~-~~~~-~~~~~-lv~e~~~~~~L~~~l~~~~--~~~~~~~~  118 (281)
T 1mp8_A           80 KLI-GVIT-ENPVW-IIMELCTLGELRSFLQVRK--YSLDLASL  118 (281)
T ss_dssp             CEE-EEEC-SSSCE-EEEECCTTEEHHHHHHHTT--TTSCHHHH
T ss_pred             eEE-EEEc-cCccE-EEEecCCCCCHHHHHHhcC--CCCCHHHH
Confidence            999 9874 45567 9999999999999996433  23555443

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.09  E-value=6.1e-11  Score=104.50  Aligned_cols=95  Identities=20%  Similarity=0.208  Sum_probs=71.9

Q ss_pred             HHHHHhccCccccceecccCccceeccccccccccccceeecC----CCcEEEEEEccCCCCch--hH-HHHHHHHhhhC
Q 043820          149 ATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI----DARVVAARIVFAGSVTG--IF-FARSVTEVAKI  221 (282)
Q Consensus       149 ~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~----~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l  221 (282)
                      .++....++|...+.||+|+||.||+             +...    .+..||+|.+.......  .+ |.+|+.++.++
T Consensus        27 ~~~~~~~~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l   93 (313)
T 3brb_A           27 EDVVIDRNLLILGKILGEGEFGSVME-------------GNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDF   93 (313)
T ss_dssp             TTTBCCGGGEEEEEEEEC-CCCCEEE-------------EEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTC
T ss_pred             HhcccCHHHeeeccceeecCCeEEEE-------------EEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcC
Confidence            34445566788889999999999999             6543    34589999997543332  23 99999999999


Q ss_pred             CCCccceeccceEeeCCe-----EEEEEEecCCCCCcccccc
Q 043820          222 YARSRPRSYPSVVIRPGY-----KVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       222 ~H~nlv~l~~g~~~~~~~-----~~~lv~Ey~~~GsL~~~l~  258 (282)
                      +||||++++ +++.....     .+ +||||+++|+|.+++.
T Consensus        94 ~h~~iv~~~-~~~~~~~~~~~~~~~-~v~e~~~~~~L~~~l~  133 (313)
T 3brb_A           94 SHPNVIRLL-GVCIEMSSQGIPKPM-VILPFMKYGDLHTYLL  133 (313)
T ss_dssp             CCTTBCCCC-EEEEC-------CEE-EEEECCTTCBHHHHHH
T ss_pred             CCCCeeeee-EEEeeccccCCcccE-EEEecccCCCHHHHHH
Confidence            999999999 99877553     36 9999999999999985

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.09  E-value=1.2e-10  Score=103.46  Aligned_cols=90  Identities=20%  Similarity=0.211  Sum_probs=73.2

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcE--EEEEEccCCCCc-hhH-HHHHHHHhhhC-CCCcccee
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARV--VAARIVFAGSVT-GIF-FARSVTEVAKI-YARSRPRS  229 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~--vAvK~l~~~~~~-~~~-f~~e~~~l~~l-~H~nlv~l  229 (282)
                      ++|...+.||+|+||.||+             +... ++..  +|+|.+...... ..+ +.+|+.++.++ +||||+++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~-------------~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~   91 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLK-------------ARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL   91 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEE-------------EEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCE
T ss_pred             HHccceeeeecCCCceEEE-------------EEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhh
Confidence            4577779999999999999             7654 4554  599988753332 233 99999999999 99999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      + +++...+..+ +||||+++|+|.+++...
T Consensus        92 ~-~~~~~~~~~~-lv~e~~~~~~L~~~l~~~  120 (327)
T 1fvr_A           92 L-GACEHRGYLY-LAIEYAPHGNLLDFLRKS  120 (327)
T ss_dssp             E-EEEEETTEEE-EEECCCTTCBHHHHHHTT
T ss_pred             c-eeeeeCCceE-EEEecCCCCCHHHHHHhc
Confidence            9 9999988888 999999999999999764

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.09  E-value=1.3e-10  Score=102.46  Aligned_cols=90  Identities=14%  Similarity=0.165  Sum_probs=76.7

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch---hH-HHHHHHHhhhCCCCcccee
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG---IF-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~---~~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      .++|...+.||+|+||.||+             +... ++..||+|.+.......   .+ +.+|+.++..++||||+++
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~   99 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYE-------------AEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPI   99 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEE-------------EEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             eccEEEEEEEcCCCCeeEEE-------------EEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence            35788889999999999999             7754 57899999997543222   24 9999999999999999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      + +++...+..+ +||||+++++|.+++..
T Consensus       100 ~-~~~~~~~~~~-lv~e~~~~~~L~~~l~~  127 (309)
T 2h34_A          100 H-DFGEIDGQLY-VDMRLINGVDLAAMLRR  127 (309)
T ss_dssp             E-EEEEETTEEE-EEEECCCCEEHHHHHHH
T ss_pred             E-EEEeeCCeEE-EEEEecCCCCHHHHHHh
Confidence            9 9999888888 99999999999999864

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.08  E-value=1.4e-10  Score=101.27  Aligned_cols=89  Identities=13%  Similarity=0.119  Sum_probs=75.1

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC---chhH-HHHHHHHhhhCCCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV---TGIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~---~~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      +.|...+.||+|+||.||+             +... .+..+|+|.+.....   ...+ +.+|+.++..++|+||++++
T Consensus        15 ~~y~~~~~lg~G~~g~Vy~-------------~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~   81 (294)
T 2rku_A           15 RRYVRGRFLGKGGFAKCFE-------------ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH   81 (294)
T ss_dssp             EEEEEEEEEEEETTEEEEE-------------EEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred             cceEEEEEEeecCCEEEEE-------------EEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeee
Confidence            4577789999999999999             7655 478999999865322   2233 99999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                       +++...+..+ +||||+++++|.+++..
T Consensus        82 -~~~~~~~~~~-lv~e~~~~~~L~~~~~~  108 (294)
T 2rku_A           82 -GFFEDNDFVF-VVLELCRRRSLLELHKR  108 (294)
T ss_dssp             -EEEECSSEEE-EEEECCTTCBHHHHHHH
T ss_pred             -eeeccCCEEE-EEEecCCCCCHHHHHHh
Confidence             9999888888 99999999999998754

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.08  E-value=5.9e-11  Score=102.73  Aligned_cols=91  Identities=20%  Similarity=0.270  Sum_probs=76.8

Q ss_pred             ccCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCC---chhH-HHHHHHHhhhCCCCcccee
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSV---TGIF-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~---~~~~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      .++|...+.||+|+||.||+             +.. .++..||+|.+.....   ...+ +.+|+.++..++||||+++
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~-------------~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~   76 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYR-------------AESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILEL   76 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEE-------------EEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCE
T ss_pred             cccceeeeeecCCCceEEEE-------------EEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeE
Confidence            35688889999999999999             765 4688999999864321   1124 9999999999999999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      + +++...+..+ +||||+++|+|.+++...
T Consensus        77 ~-~~~~~~~~~~-lv~e~~~~~~L~~~l~~~  105 (278)
T 3cok_A           77 Y-NYFEDSNYVY-LVLEMCHNGEMNRYLKNR  105 (278)
T ss_dssp             E-EEEECSSEEE-EEEECCTTEEHHHHHHTC
T ss_pred             E-EEEccCCeEE-EEEecCCCCcHHHHHhhc
Confidence            9 9998888888 999999999999998754

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.08  E-value=1.1e-10  Score=105.11  Aligned_cols=98  Identities=18%  Similarity=0.159  Sum_probs=77.5

Q ss_pred             cCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCch---hH-HHHHHHHhhhCCCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVTG---IF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~~---~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      +.|...+.||+|+||.||+             +.. .++..||+|.+.......   .+ |.+|+.++.+++||||++++
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~-------------a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~  120 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYF-------------ARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR  120 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEE-------------EEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             hheeeeeEEccCCCEEEEE-------------EEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEE
Confidence            3477779999999999999             764 468899999987543332   23 89999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                       |++...+..+ +||||++ |+|.+++....  ..++|..+
T Consensus       121 -~~~~~~~~~~-lv~e~~~-g~l~~~l~~~~--~~l~~~~~  156 (348)
T 1u5q_A          121 -GCYLREHTAW-LVMEYCL-GSASDLLEVHK--KPLQEVEI  156 (348)
T ss_dssp             -EEEEETTEEE-EEEECCS-EEHHHHHHHHT--SCCCHHHH
T ss_pred             -EEEEECCeEE-EEEecCC-CCHHHHHHHhc--CCCCHHHH
Confidence             9999988888 9999998 68887775322  23555443

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.08  E-value=6.9e-11  Score=113.43  Aligned_cols=92  Identities=18%  Similarity=0.143  Sum_probs=77.5

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhCCCCcccee
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      .++|...+.||+|+||.||+             +... ++..||+|.+....   ..... +.+|+.+|..++|||||++
T Consensus       183 ~~~f~~~~~LG~G~fG~Vy~-------------a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l  249 (576)
T 2acx_A          183 KNTFRQYRVLGKGGFGEVCA-------------CQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL  249 (576)
T ss_dssp             GGGEEEEEEEEEETTEEEEE-------------EEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ccceEEEEEEeeCCCEEEEE-------------EEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeE
Confidence            45688889999999999999             7654 58999999986432   22234 8999999999999999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccCCC
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      + +++.+.+..+ +||||+++|+|.+++....
T Consensus       250 ~-~~~~~~~~l~-lVmEy~~gg~L~~~l~~~~  279 (576)
T 2acx_A          250 A-YAYETKDALC-LVLTLMNGGDLKFHIYHMG  279 (576)
T ss_dssp             E-EEEECSSEEE-EEECCCCSCBHHHHHHSSS
T ss_pred             E-EEEeeCCEEE-EEEEcCCCCcHHHHHHhcC
Confidence            9 9998888888 9999999999999987543

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.07  E-value=4.5e-11  Score=111.13  Aligned_cols=90  Identities=12%  Similarity=0.029  Sum_probs=69.1

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCC---CCchhH-HHHHHHHhhhCCCCcccee
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAG---SVTGIF-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~---~~~~~~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      .++|...+.||+|+||.||+             +... ++..||+|.+...   ...... +.+|+.++..++||||+++
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l  213 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVIL-------------VKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL  213 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEE-------------EEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCE
T ss_pred             hHHcEEeEEEeeCcCEEEEE-------------EEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeE
Confidence            45688889999999999999             7643 5889999998643   222233 8899999999999999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      + +++...+..+ +||||+++|+|.+++..
T Consensus       214 ~-~~~~~~~~~~-lv~e~~~~~~L~~~l~~  241 (446)
T 4ejn_A          214 K-YSFQTHDRLC-FVMEYANGGELFFHLSR  241 (446)
T ss_dssp             E-EEEEETTEEE-EEECCCSSCBHHHHHHH
T ss_pred             E-EEEeeCCEEE-EEEeeCCCCcHHHHHHh
Confidence            9 9999998888 99999999999988864

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.07  E-value=5.5e-11  Score=105.87  Aligned_cols=98  Identities=19%  Similarity=0.154  Sum_probs=72.7

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CC----cEEEEEEccCCCC-chhH-HHHHHHHhhhCCCCccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DA----RVVAARIVFAGSV-TGIF-FARSVTEVAKIYARSRPR  228 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~----~~vAvK~l~~~~~-~~~~-f~~e~~~l~~l~H~nlv~  228 (282)
                      ++|...+.||+|+||.||+             +... ++    ..||+|.+..... ...+ |.+|+.++.+++|+||++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~-------------~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   81 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYK-------------GLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR   81 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEE-------------EEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCC
T ss_pred             HHcccceEEeeCCCeEEEE-------------EEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeE
Confidence            4577889999999999999             7643 23    3579998865433 2334 999999999999999999


Q ss_pred             eccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          229 SYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       229 l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      ++ +++..+. .+ +|+||+++|+|.+++....  ..++|..+
T Consensus        82 ~~-~~~~~~~-~~-~v~e~~~~g~L~~~l~~~~--~~~~~~~~  119 (327)
T 3poz_A           82 LL-GICLTST-VQ-LITQLMPFGCLLDYVREHK--DNIGSQYL  119 (327)
T ss_dssp             EE-EEEESSS-EE-EEEECCTTCBHHHHHHHST--TSCCHHHH
T ss_pred             EE-EEEecCC-eE-EEEEecCCCcHHHHHHhcC--CCCCHHHH
Confidence            99 9988755 56 8999999999999997543  23555443

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.07  E-value=7.5e-11  Score=102.77  Aligned_cols=89  Identities=18%  Similarity=0.174  Sum_probs=73.0

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      ++|...+.||+|+||.||+             +... ++..||+|.+... ....+ +.+|+.++..++||||++++ ++
T Consensus         6 ~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~-~~   70 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVK-------------ARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYY-AA   70 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEE-------------EEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEE-EE
T ss_pred             ccchhhheeccCCcEEEEE-------------EEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHH-HH
Confidence            4678889999999999999             7754 6889999998642 22234 99999999999999999999 98


Q ss_pred             EeeC-------------CeEEEEEEecCCCCCccccccCC
Q 043820          234 VIRP-------------GYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       234 ~~~~-------------~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +.+.             ...+ +||||+++|+|.+++...
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~-lv~e~~~~~~L~~~l~~~  109 (303)
T 1zy4_A           71 WLERRNFVKPMTAVKKKSTLF-IQMEYCENGTLYDLIHSE  109 (303)
T ss_dssp             EEECCCCCC------CEEEEE-EEEECCCSCBHHHHHHHS
T ss_pred             HHhhcchhhhhcccccCCceE-EEEecCCCCCHHHhhhcc
Confidence            7652             3445 999999999999999643

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.07  E-value=2e-10  Score=99.99  Aligned_cols=88  Identities=18%  Similarity=0.146  Sum_probs=70.6

Q ss_pred             ccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch--hH-HHHHHHHhhhCCCCccceeccce
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG--IF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      |...+.||+|+||.||+             +... .+..||+|.+.......  .+ +.+|+.++..++||||++++ ++
T Consensus        28 ~~~~~~lg~G~~g~Vy~-------------~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~-~~   93 (290)
T 1t4h_A           28 LKFDIEIGRGSFKTVYK-------------GLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFY-DS   93 (290)
T ss_dssp             EEEEEEEEECSSEEEEE-------------EEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEE-EE
T ss_pred             EEeeeeccCCCCeEEEE-------------eEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeee-ee
Confidence            55667899999999999             7654 57899999987543322  23 99999999999999999999 98


Q ss_pred             EeeC---CeEEEEEEecCCCCCccccccC
Q 043820          234 VIRP---GYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       234 ~~~~---~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +...   ...+++||||+++|+|.+++..
T Consensus        94 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  122 (290)
T 1t4h_A           94 WESTVKGKKCIVLVTELMTSGTLKTYLKR  122 (290)
T ss_dssp             EEEESSSCEEEEEEEECCCSCBHHHHHHH
T ss_pred             eccccCCCceEEEEEEecCCCCHHHHHHH
Confidence            7652   2333499999999999999864

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.06  E-value=1.2e-10  Score=101.73  Aligned_cols=95  Identities=13%  Similarity=0.096  Sum_probs=73.3

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH-HHHHHHHhhh--CCCCccceecc
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF-FARSVTEVAK--IYARSRPRSYP  231 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~--l~H~nlv~l~~  231 (282)
                      .++|...+.||+|+||.||+             +.. ++..||+|.+...   ... +..|.+++..  ++||||++++ 
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~-------------~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~-   68 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWR-------------GSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFI-   68 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEE-------------EEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEE-
T ss_pred             cCcEEEEEeeccCCCcEEEE-------------EEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEE-
Confidence            35688889999999999999             876 6789999998542   233 6677776665  8999999999 


Q ss_pred             ceEeeC----CeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          232 SVVIRP----GYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       232 g~~~~~----~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      +++...    ...+ +||||+++|+|.+++...    .++|..++
T Consensus        69 ~~~~~~~~~~~~~~-lv~e~~~~g~L~~~l~~~----~~~~~~~~  108 (301)
T 3q4u_A           69 ASDMTSRHSSTQLW-LITHYHEMGSLYDYLQLT----TLDTVSCL  108 (301)
T ss_dssp             EEEEEEETTEEEEE-EEECCCTTCBHHHHHTTC----CBCHHHHH
T ss_pred             EeeccccCCCceeE-EehhhccCCCHHHHHhhc----ccCHHHHH
Confidence            987653    2345 999999999999999532    35665443

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.06  E-value=7.5e-11  Score=102.87  Aligned_cols=97  Identities=16%  Similarity=0.122  Sum_probs=75.4

Q ss_pred             ccccceecccCccceeccccccccccccceeecC----CCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCccceecc
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARI----DARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~----~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      |...+.||+|+||.||+             +...    .+..+|+|.+....... .+ |.+|+.++..++|+||++++ 
T Consensus        23 ~~~~~~lg~G~~g~Vy~-------------~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~-   88 (298)
T 3pls_A           23 THSDRVIGKGHFGVVYH-------------GEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI-   88 (298)
T ss_dssp             EEEEEEEEEETTEEEEE-------------EEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCC-
T ss_pred             EccCceeccCCCceEEE-------------EEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEE-
Confidence            44558999999999999             6532    23479999987544333 34 99999999999999999999 


Q ss_pred             ceEeeCCeE-EEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          232 SVVIRPGYK-VGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       232 g~~~~~~~~-~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      +++...+.. + ++|||+.+|+|.+++....  ..++|..+
T Consensus        89 ~~~~~~~~~~~-~v~e~~~~~~L~~~~~~~~--~~~~~~~~  126 (298)
T 3pls_A           89 GIMLPPEGLPH-VLLPYMCHGDLLQFIRSPQ--RNPTVKDL  126 (298)
T ss_dssp             EEECCSSSCCE-EEECCCTTCBHHHHHHCTT--CCCBHHHH
T ss_pred             EEEecCCCCcE-EEEecccCCCHHHHHhccc--cCCCHHHH
Confidence            999876665 6 9999999999999997643  23454433

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.06  E-value=1.8e-10  Score=102.58  Aligned_cols=90  Identities=16%  Similarity=0.169  Sum_probs=76.0

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch--hH-HHHHHHHhhhCCCCccceecc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG--IF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      ++|...+.||+|+||.||+             +... ++..||+|.+.......  .+ +.+|+.++..++|+||++++ 
T Consensus        25 ~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~-   90 (331)
T 4aaa_A           25 EKYENLGLVGEGSYGMVMK-------------CRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLL-   90 (331)
T ss_dssp             GGEEEEEEGGGGTTSSEEE-------------EEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEE-
T ss_pred             hhheeeeEEeecCCEEEEE-------------EEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEE-
Confidence            4577789999999999999             7755 48899999986543332  23 88999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +++...+..+ +||||+++++|.+++...
T Consensus        91 ~~~~~~~~~~-lv~e~~~~~~l~~~~~~~  118 (331)
T 4aaa_A           91 EVCKKKKRWY-LVFEFVDHTILDDLELFP  118 (331)
T ss_dssp             EEEEETTEEE-EEEECCSEEHHHHHHHST
T ss_pred             EEeecCCEEE-EEEecCCcchHHHHHhhc
Confidence            9999988888 999999999998876543

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.06  E-value=1.7e-10  Score=103.03  Aligned_cols=90  Identities=13%  Similarity=0.117  Sum_probs=75.6

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC---chhH-HHHHHHHhhhCCCCcccee
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV---TGIF-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~---~~~~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      .++|...+.||+|+||.||+             +... .+..+|+|.+.....   ...+ +.+|+.++..++|+||+++
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~-------------~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~  106 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFE-------------ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF  106 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEE-------------EEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             CCceEEEEEEeeCCCeEEEE-------------EEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeE
Confidence            35677889999999999999             7655 478999999865322   2233 9999999999999999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      + +++.+.+..+ +||||+++++|.+++..
T Consensus       107 ~-~~~~~~~~~~-lv~e~~~~~~L~~~~~~  134 (335)
T 2owb_A          107 H-GFFEDNDFVF-VVLELCRRRSLLELHKR  134 (335)
T ss_dssp             E-EEEECSSEEE-EEECCCTTCBHHHHHHH
T ss_pred             E-EEEecCCeEE-EEEecCCCCCHHHHHhc
Confidence            9 9999888888 99999999999998754

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.06  E-value=1.8e-10  Score=108.01  Aligned_cols=91  Identities=18%  Similarity=0.214  Sum_probs=77.0

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhCCCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      +.|...+.||+|+||.||+             +... .+..||+|.+....   ....+ +.+|+.++.+++|||||+++
T Consensus        26 ~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~   92 (484)
T 3nyv_A           26 DRYKGQRVLGKGSFGEVIL-------------CKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY   92 (484)
T ss_dssp             HHEEEEEEEEEETTEEEEE-------------EEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred             CceEEeeEEecCCCEEEEE-------------EEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEE
Confidence            3577789999999999999             7654 68899999986532   22334 99999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCCC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                       +++...+..+ +||||+++|+|.+++....
T Consensus        93 -~~~~~~~~~~-lv~e~~~~~~L~~~~~~~~  121 (484)
T 3nyv_A           93 -EFFEDKGYFY-LVGEVYTGGELFDEIISRK  121 (484)
T ss_dssp             -EEEECSSEEE-EEECCCCSCBHHHHHHTCS
T ss_pred             -EEEEeCCEEE-EEEecCCCCCHHHHHHhcC
Confidence             9999888888 9999999999999887543

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.06  E-value=8.3e-11  Score=104.53  Aligned_cols=99  Identities=15%  Similarity=0.100  Sum_probs=75.9

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCc----EEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DAR----VVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPR  228 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~----~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~  228 (282)
                      ++|...+.||+|+||.||+             +... ++.    .||+|.+...... ... +.+|+.++..++|+||++
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~-------------~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~   79 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHK-------------GVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR   79 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEE-------------EEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCC
T ss_pred             hHceeeeeeeecCCceEEE-------------EEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCe
Confidence            4577779999999999999             6643 333    4888988644322 233 899999999999999999


Q ss_pred             eccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          229 SYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       229 l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      ++ +++. .+..+ +||||+++|+|.+++....  ..++|...+
T Consensus        80 ~~-~~~~-~~~~~-~v~e~~~~~~L~~~l~~~~--~~~~~~~~~  118 (325)
T 3kex_A           80 LL-GLCP-GSSLQ-LVTQYLPLGSLLDHVRQHR--GALGPQLLL  118 (325)
T ss_dssp             EE-EEEC-BSSEE-EEEECCTTCBSHHHHHSSG--GGSCTTHHH
T ss_pred             EE-EEEc-CCccE-EEEEeCCCCCHHHHHHHcc--ccCCHHHHH
Confidence            99 9875 45566 9999999999999997543  246665543

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.06  E-value=2e-10  Score=100.25  Aligned_cols=90  Identities=12%  Similarity=0.030  Sum_probs=75.6

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC---------chhH-HHHHHHHhhhCC-
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV---------TGIF-FARSVTEVAKIY-  222 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~---------~~~~-f~~e~~~l~~l~-  222 (282)
                      .++|...+.||+|+||.||+             +... ++..||+|.+.....         ...+ +.+|+.++.++. 
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~   82 (298)
T 1phk_A           16 YENYEPKEILGRGVSSVVRR-------------CIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSG   82 (298)
T ss_dssp             TTTEEEEEEEEECSSEEEEE-------------EEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hhccceeeeecCCCceEEEE-------------EEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcC
Confidence            46788889999999999999             7754 578999999865321         1123 889999999995 


Q ss_pred             CCccceeccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          223 ARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       223 H~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ||||++++ +++......+ +||||+++|+|.+++..
T Consensus        83 h~~i~~~~-~~~~~~~~~~-lv~e~~~~~~L~~~l~~  117 (298)
T 1phk_A           83 HPNIIQLK-DTYETNTFFF-LVFDLMKKGELFDYLTE  117 (298)
T ss_dssp             CTTBCCEE-EEEECSSEEE-EEEECCTTCBHHHHHHH
T ss_pred             CCCEeeee-eeeccCCeEE-EEEeccCCCcHHHHHhc
Confidence            99999999 9998888888 99999999999999864

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.06  E-value=7e-11  Score=106.25  Aligned_cols=103  Identities=17%  Similarity=0.121  Sum_probs=84.8

Q ss_pred             CCCccCHHHHHHhccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhh
Q 043820          142 ELPLFELATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVA  219 (282)
Q Consensus       142 ~~~~~~~~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~  219 (282)
                      +...+++.+.....++|...++||+|+||.||+             +... ++..||+|.+... ..... +..|+.++.
T Consensus        21 ~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~-------------~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~   86 (360)
T 3llt_A           21 EIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLL-------------CQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILK   86 (360)
T ss_dssp             GGGSCCCCTTCEETTTEEEEEEEEECSSEEEEE-------------EEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHH
T ss_pred             cceeeeeecceEecCEEEEEEEEcccCCeEEEE-------------EEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHH
Confidence            345566666667778999999999999999999             7654 5789999998642 22233 888999999


Q ss_pred             hCC-----CCccceeccceEeeCCeEEEEEEecCCCCCccccccCCC
Q 043820          220 KIY-----ARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       220 ~l~-----H~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      .++     |+|||+++ +++...+..+ +||||+ +|+|.+++....
T Consensus        87 ~l~~~~~~h~~iv~~~-~~~~~~~~~~-lv~e~~-~~~L~~~~~~~~  130 (360)
T 3llt_A           87 KIQNDDINNNNIVKYH-GKFMYYDHMC-LIFEPL-GPSLYEIITRNN  130 (360)
T ss_dssp             HTCCCSTTGGGBCCEE-EEEEETTEEE-EEECCC-CCBHHHHHHHTT
T ss_pred             HhcccCCCCCCeeccc-ceeeECCeeE-EEEcCC-CCCHHHHHHhcC
Confidence            886     99999999 9999998888 999999 999999986543

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.06  E-value=1.5e-10  Score=103.17  Aligned_cols=92  Identities=23%  Similarity=0.204  Sum_probs=74.9

Q ss_pred             HhccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch--hH-HHHHHHHhhhCCCCccce
Q 043820          153 NATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG--IF-FARSVTEVAKIYARSRPR  228 (282)
Q Consensus       153 ~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l~H~nlv~  228 (282)
                      ...++|...+.||+|+||.||+             +... ++..||+|.+.......  .+ +.+|+.++..++|+||++
T Consensus        31 ~~~~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   97 (329)
T 3gbz_A           31 TSIDRYRRITKLGEGTYGEVYK-------------AIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIE   97 (329)
T ss_dssp             -CGGGEEEEEEEEECSSSEEEE-------------EEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCC
T ss_pred             cchhhEEEEEEEEecCCeEEEE-------------EEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcce
Confidence            3456788889999999999999             7643 68899999997543322  23 889999999999999999


Q ss_pred             eccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          229 SYPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       229 l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ++ +++......+ +||||++ |+|.+++...
T Consensus        98 ~~-~~~~~~~~~~-lv~e~~~-~~L~~~~~~~  126 (329)
T 3gbz_A           98 LK-SVIHHNHRLH-LIFEYAE-NDLKKYMDKN  126 (329)
T ss_dssp             EE-EEEEETTEEE-EEEECCS-EEHHHHHHHC
T ss_pred             EE-EEEecCCEEE-EEEecCC-CCHHHHHhhc
Confidence            99 9999988888 9999999 5999988643

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.06  E-value=1.9e-10  Score=100.32  Aligned_cols=87  Identities=18%  Similarity=0.192  Sum_probs=71.4

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch--hH-HHHHHHHhhhCCCCccceecc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG--IF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      ++|...+.||+|+||.||+             +... ++..||+|.+.......  .. +.+|+.++.+++|+||++++ 
T Consensus         2 ~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~-   67 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFK-------------AKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH-   67 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEE-------------EEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEE-
T ss_pred             CCceeeeEecCCCCeEEEE-------------EEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEE-
Confidence            4577789999999999999             7654 58899999987543322  24 99999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCcccccc
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~  258 (282)
                      +++..++..+ +||||+++ +|.+++.
T Consensus        68 ~~~~~~~~~~-lv~e~~~~-~l~~~~~   92 (292)
T 3o0g_A           68 DVLHSDKKLT-LVFEFCDQ-DLKKYFD   92 (292)
T ss_dssp             EEEEETTEEE-EEEECCSE-EHHHHHH
T ss_pred             eEEEeCCEEE-EEEecCCC-CHHHHHH
Confidence            9999888888 99999986 4544443

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.06  E-value=7e-11  Score=114.88  Aligned_cols=91  Identities=16%  Similarity=0.140  Sum_probs=72.2

Q ss_pred             ceecccCccceeccccccccccccceeecC---CCcEEEEEEccCCCCch--hH-HHHHHHHhhhCCCCccceeccceEe
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARI---DARVVAARIVFAGSVTG--IF-FARSVTEVAKIYARSRPRSYPSVVI  235 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~---~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l~H~nlv~l~~g~~~  235 (282)
                      +.||+|+||.||+             |...   .+..||||+++......  .+ |.+|+.+|.+++|+|||+++ |++.
T Consensus       375 ~~LG~G~fG~Vy~-------------~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~-~~~~  440 (635)
T 4fl3_A          375 KELGSGNFGTVKK-------------GYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI-GICE  440 (635)
T ss_dssp             EEEEECSSEEEEE-------------EEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEE-EEEE
T ss_pred             CEeccCCCEEEEE-------------EEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEE-EEEe
Confidence            4799999999999             7542   35789999997543322  34 99999999999999999999 9885


Q ss_pred             eCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          236 RPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       236 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                       .+..+ +||||+++|+|.++|....   .++|..+
T Consensus       441 -~~~~~-lv~E~~~~g~L~~~l~~~~---~l~~~~~  471 (635)
T 4fl3_A          441 -AESWM-LVMEMAELGPLNKYLQQNR---HVKDKNI  471 (635)
T ss_dssp             -SSSEE-EEEECCTTEEHHHHHHHCT---TCCHHHH
T ss_pred             -cCCEE-EEEEccCCCCHHHHHhhCC---CCCHHHH
Confidence             45566 9999999999999996432   4555544

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.05  E-value=8.1e-11  Score=105.68  Aligned_cols=88  Identities=18%  Similarity=0.245  Sum_probs=74.0

Q ss_pred             cCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCC---CchhH-HHHHHHHhhhCCCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGS---VTGIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ++|...+.||+|+||.||+             +.. ..+..||+|.+....   ..... +.+|+.++..++||||++++
T Consensus         9 ~~Y~i~~~lG~G~~g~V~~-------------a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~   75 (336)
T 3h4j_B            9 GPYIIRETLGEGSFGKVKL-------------ATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLY   75 (336)
T ss_dssp             TTEEEEEEEEEETTEEEEE-------------EEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEE
T ss_pred             CCEEEEEEEecCCCeEEEE-------------EEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEE
Confidence            5688889999999999999             775 468899999986432   12223 89999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                       +++......+ +||||+ +|+|.+++..
T Consensus        76 -~~~~~~~~~~-lv~E~~-~g~l~~~l~~  101 (336)
T 3h4j_B           76 -DVITTPTDIV-MVIEYA-GGELFDYIVE  101 (336)
T ss_dssp             -EEEECSSEEE-EEECCC-CEEHHHHHHH
T ss_pred             -EEEEeCCEEE-EEEECC-CCcHHHHHHH
Confidence             9999888888 999999 7899888754

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.05  E-value=1.6e-10  Score=113.09  Aligned_cols=97  Identities=11%  Similarity=0.158  Sum_probs=75.4

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC--CCcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCccceecc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI--DARVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~--~~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      ++|...+.||+|+||.||+             +...  ++..||+|.+...... ... |.+|+.++.+++|||||+++ 
T Consensus        80 ~~y~i~~~lg~G~~g~Vy~-------------a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~-  145 (681)
T 2pzi_A           80 GQYEVKGCIAHGGLGWIYL-------------ALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIF-  145 (681)
T ss_dssp             TTEEEEEEEEEETTEEEEE-------------EEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEE-
T ss_pred             CceEEEEEEeeCCCeEEEE-------------EEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEe-
Confidence            6788889999999999999             7654  5789999998654332 233 99999999999999999999 


Q ss_pred             ceEeeCCe-----EEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          232 SVVIRPGY-----KVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       232 g~~~~~~~-----~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      +++...+.     .+ |||||+++|+|.+++..     .++|..++
T Consensus       146 ~~~~~~~~~~~~~~~-lv~E~~~g~~L~~~~~~-----~l~~~~~~  185 (681)
T 2pzi_A          146 NFVEHTDRHGDPVGY-IVMEYVGGQSLKRSKGQ-----KLPVAEAI  185 (681)
T ss_dssp             EEEEEECTTSCEEEE-EEEECCCCEECC----C-----CCCHHHHH
T ss_pred             eeEeecCCCCCceeE-EEEEeCCCCcHHHHHhC-----CCCHHHHH
Confidence            99887554     46 99999999999987743     35665543

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.05  E-value=1e-10  Score=101.22  Aligned_cols=87  Identities=13%  Similarity=0.161  Sum_probs=72.1

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccce
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      .++|...+.||+|+||.||+             +.. .+..||+|.+....  ..+ |.+|+.++..++|+||++++ ++
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~-------------~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~-~~   82 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVML-------------GDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLL-GV   82 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEE-------------EEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEE-EE
T ss_pred             hhhceEEeEEecCCCceEEE-------------EEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEE-EE
Confidence            45678889999999999999             765 47899999986432  334 99999999999999999999 98


Q ss_pred             EeeCC-eEEEEEEecCCCCCccccccC
Q 043820          234 VIRPG-YKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       234 ~~~~~-~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +...+ ..+ +||||+++|+|.+++..
T Consensus        83 ~~~~~~~~~-lv~e~~~~~~L~~~l~~  108 (278)
T 1byg_A           83 IVEEKGGLY-IVTEYMAKGSLVDYLRS  108 (278)
T ss_dssp             ECCC--CCE-EEECCCTTEEHHHHHHH
T ss_pred             EEcCCCceE-EEEecCCCCCHHHHHHh
Confidence            76655 456 99999999999999864

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.04  E-value=1.1e-10  Score=101.75  Aligned_cols=98  Identities=15%  Similarity=0.176  Sum_probs=75.5

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCch--hH-HHHHHHHhhhCCCCccceec
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTG--IF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ..++|...+.||+|+||.||+             +...  ..||+|.+.......  .+ |.+|+.++..++|+||++++
T Consensus        22 ~~~~y~~~~~lG~G~~g~Vy~-------------~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~   86 (289)
T 3og7_A           22 PDGQITVGQRIGSGSFGTVYK-------------GKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM   86 (289)
T ss_dssp             CTTSCEEEEEEEECSSEEEEE-------------EESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred             CccceeeeeEecCCCCeEEEE-------------EEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEE
Confidence            445688889999999999999             7653  369999987544332  23 99999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                       +++ ..+..+ +||||+++|+|.+++....  ..++|..+
T Consensus        87 -~~~-~~~~~~-lv~e~~~~~~L~~~l~~~~--~~~~~~~~  122 (289)
T 3og7_A           87 -GYS-TAPQLA-IVTQWCEGSSLYHHLHASE--TKFEMKKL  122 (289)
T ss_dssp             -EEE-CSSSCE-EEEECCCEEEHHHHHTTC-----CCHHHH
T ss_pred             -eec-cCCccE-EEEEecCCCcHHHHHhhcc--CCCCHHHH
Confidence             865 445566 9999999999999996543  23555443

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.04  E-value=2.6e-10  Score=101.54  Aligned_cols=82  Identities=16%  Similarity=0.097  Sum_probs=70.9

Q ss_pred             cceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCC-CCccceeccceEeeC
Q 043820          161 NNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIY-ARSRPRSYPSVVIRP  237 (282)
Q Consensus       161 ~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~-H~nlv~l~~g~~~~~  237 (282)
                      .+.||+|+||.||+             +... ++..||+|.+...   ... +.+|+.++..+. ||||++++ +++.+.
T Consensus        16 ~~~lG~G~~g~V~~-------------~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~-~~~~~~   78 (325)
T 3kn6_A           16 DKPLGEGSFSICRK-------------CVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLH-EVFHDQ   78 (325)
T ss_dssp             SCCSEEETTEEEEE-------------EEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEE-EEEECS
T ss_pred             CCccccCCCeEEEE-------------EEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEE-EEEEcC
Confidence            37899999999999             7754 5889999998542   334 889999999996 99999999 999988


Q ss_pred             CeEEEEEEecCCCCCccccccCC
Q 043820          238 GYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       238 ~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ...+ +||||+++|+|.+++...
T Consensus        79 ~~~~-lv~e~~~~~~L~~~l~~~  100 (325)
T 3kn6_A           79 LHTF-LVMELLNGGELFERIKKK  100 (325)
T ss_dssp             SEEE-EEECCCCSCBHHHHHHHC
T ss_pred             CEEE-EEEEccCCCcHHHHHHhc
Confidence            8888 999999999999998653

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.04  E-value=1.2e-10  Score=109.45  Aligned_cols=89  Identities=17%  Similarity=0.215  Sum_probs=75.3

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC--CchhH-HHHHHHHhhhCCCCccceecc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS--VTGIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~--~~~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      +.|...+.||+|+||.||+             +... ++..||+|.+....  ..... +.+|+.++.+++|||||+++ 
T Consensus        22 ~~y~~~~~lG~G~~g~V~~-------------~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~-   87 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLK-------------CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF-   87 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEE-------------EEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEE-
T ss_pred             cceEEeEEEeecCCEEEEE-------------EEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEE-
Confidence            3577889999999999999             7654 58899999986422  22334 99999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +++......+ +||||+++|+|.+++..
T Consensus        88 ~~~~~~~~~~-lv~e~~~~~~L~~~~~~  114 (486)
T 3mwu_A           88 EILEDSSSFY-IVGELYTGGELFDEIIK  114 (486)
T ss_dssp             EEEECSSEEE-EEECCCCSCBHHHHHHH
T ss_pred             EEEEcCCEEE-EEEEcCCCCcHHHHHHh
Confidence            9999888888 99999999999888754

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.04  E-value=1.2e-10  Score=111.23  Aligned_cols=90  Identities=18%  Similarity=0.133  Sum_probs=76.2

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC---chhH-HHHHHHHhhhCCCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV---TGIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~---~~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ++|...+.||+|+||.||+             +... ++..||+|.+.....   .... +.+|+.++..++|||||+++
T Consensus       185 ~~f~~~~~LG~G~fG~Vy~-------------a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~  251 (543)
T 3c4z_A          185 DWFLDFRVLGRGGFGEVFA-------------CQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA  251 (543)
T ss_dssp             GGEEEEEEEEECSSSEEEE-------------EEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             hheEEEEEEeeCCCeEEEE-------------EEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEE
Confidence            5577778999999999999             7764 589999999964321   2234 89999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                       +++......+ +||||+++|+|.++|...
T Consensus       252 -~~~~~~~~l~-lVmE~~~gg~L~~~l~~~  279 (543)
T 3c4z_A          252 -YAFETKTDLC-LVMTIMNGGDIRYHIYNV  279 (543)
T ss_dssp             -EEEECSSEEE-EEECCCTTCBHHHHHHTS
T ss_pred             -EEEeeCCEEE-EEEEeccCCCHHHHHHHh
Confidence             9988888888 999999999999998754

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.04  E-value=1.8e-10  Score=100.31  Aligned_cols=89  Identities=17%  Similarity=0.223  Sum_probs=75.8

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC--chhH-HHHHHHHhhhCCCCccceecc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV--TGIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~--~~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      ++|...+.||+|+||.||+             +... ++..||+|.+.....  .... +.+|+.++.+++|+||++++ 
T Consensus        22 ~~y~i~~~lg~G~~g~V~~-------------~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~-   87 (287)
T 2wei_A           22 ERYNIVCMLGKGSFGEVLK-------------CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF-   87 (287)
T ss_dssp             HHEEEEEEEEEETTEEEEE-------------EEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEE-
T ss_pred             hcceeeEEEcCCCCEEEEE-------------EEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEE-
Confidence            4678889999999999999             7654 588999999864322  2334 99999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +++......+ +|+||+++++|.+++..
T Consensus        88 ~~~~~~~~~~-lv~e~~~~~~L~~~l~~  114 (287)
T 2wei_A           88 EILEDSSSFY-IVGELYTGGELFDEIIK  114 (287)
T ss_dssp             EEEECSSEEE-EEECCCCSCBHHHHHHH
T ss_pred             EEEeCCCeEE-EEEEccCCCCHHHHHHh
Confidence            9998888888 99999999999888754

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.04  E-value=1.5e-10  Score=104.03  Aligned_cols=88  Identities=13%  Similarity=0.104  Sum_probs=73.6

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhHHHHHHHHhhhC-CCCccceeccc
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIFFARSVTEVAKI-YARSRPRSYPS  232 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l-~H~nlv~l~~g  232 (282)
                      .++|...+.||+|+||.||+             +... ++..||+|.+.....   .+.+|+.++.++ +||||++++ +
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~-------------~~~~~~~~~~avK~~~~~~~---~~~~E~~~l~~~~~hp~iv~~~-~   83 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKR-------------CIHKATNMEFAVKIIDKSKR---DPTEEIEILLRYGQHPNIITLK-D   83 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEE-------------EEETTTTEEEEEEEEETTTC---CCHHHHHHHHHHTTSTTBCCEE-E
T ss_pred             cccEEEEEEEeeCCCEEEEE-------------EEECCCCCEEEEEEEEcccC---ChHHHHHHHHHhcCCCCcCeEE-E
Confidence            35688889999999999999             7654 588999999865321   166788888887 799999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ++.++...+ +||||+++|+|.+++...
T Consensus        84 ~~~~~~~~~-lv~E~~~gg~L~~~i~~~  110 (342)
T 2qr7_A           84 VYDDGKYVY-VVTELMKGGELLDKILRQ  110 (342)
T ss_dssp             EEECSSEEE-EEECCCCSCBHHHHHHTC
T ss_pred             EEEcCCEEE-EEEeCCCCCcHHHHHHHc
Confidence            998888888 999999999999998654

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.03  E-value=2.5e-10  Score=101.12  Aligned_cols=89  Identities=15%  Similarity=0.174  Sum_probs=71.3

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC--------chhH-HHHHHHHhhhCCCCc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV--------TGIF-FARSVTEVAKIYARS  225 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~--------~~~~-f~~e~~~l~~l~H~n  225 (282)
                      ++|...+.||+|+||.||+             +... ++..||+|.+.....        .... +.+|+.++..++|+|
T Consensus        10 ~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~   76 (322)
T 2ycf_A           10 DEYIMSKTLGSGACGEVKL-------------AFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC   76 (322)
T ss_dssp             HHEEEEEEEEECSSEEEEE-------------EEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTT
T ss_pred             hceeEeeEEecCCCEEEEE-------------EEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCC
Confidence            4678889999999999999             7654 578999999864321        1123 899999999999999


Q ss_pred             cceeccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          226 RPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       226 lv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      |++++ +++.... .+ +||||+++|+|.+++...
T Consensus        77 i~~~~-~~~~~~~-~~-lv~e~~~~~~L~~~~~~~  108 (322)
T 2ycf_A           77 IIKIK-NFFDAED-YY-IVLELMEGGELFDKVVGN  108 (322)
T ss_dssp             BCCEE-EEEESSS-EE-EEEECCTTEETHHHHSTT
T ss_pred             CceEe-eEEcCCc-eE-EEEecCCCCcHHHHHhcc
Confidence            99999 9876554 56 999999999999988654

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.03  E-value=1.1e-10  Score=101.31  Aligned_cols=89  Identities=21%  Similarity=0.335  Sum_probs=75.1

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhCCCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ++|...+.||+|+||.||+             +... ++..||+|.+....   ..... +.+|+.++..++|+||++++
T Consensus        14 ~~y~~~~~lg~G~~g~Vy~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~   80 (284)
T 2vgo_A           14 DDFDIGRPLGKGKFGNVYL-------------AREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMY   80 (284)
T ss_dssp             GGEEEEEEEEECSSEEEEE-------------EEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred             hhceeeheecCCCCeEEEE-------------EEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEE
Confidence            4678889999999999999             7654 57889999986432   11234 99999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                       +++...+..+ +||||+++|+|.+++..
T Consensus        81 -~~~~~~~~~~-lv~e~~~~~~L~~~l~~  107 (284)
T 2vgo_A           81 -NYFHDRKRIY-LMLEFAPRGELYKELQK  107 (284)
T ss_dssp             -EEEECSSEEE-EEECCCTTEEHHHHHHH
T ss_pred             -EEEEcCCEEE-EEEEeCCCCcHHHHHHh
Confidence             9998888888 99999999999998864

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.03  E-value=1.8e-10  Score=104.09  Aligned_cols=91  Identities=15%  Similarity=0.067  Sum_probs=75.2

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhC-CCCccc
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKI-YARSRP  227 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l-~H~nlv  227 (282)
                      ..++|...+.||+|+||.||+             +... .+..||+|.+....   ....+ +..|..++..+ +||||+
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~-------------~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv   84 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVML-------------SERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLT   84 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEE-------------EEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBC
T ss_pred             chHHcEEEEEEeeCCCEEEEE-------------EEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEe
Confidence            346788889999999999999             7655 37889999986532   12233 88999999888 899999


Q ss_pred             eeccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          228 RSYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       228 ~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +++ +++...+..+ +||||+++|+|.++|..
T Consensus        85 ~l~-~~~~~~~~~~-lv~E~~~gg~L~~~l~~  114 (353)
T 2i0e_A           85 QLH-SCFQTMDRLY-FVMEYVNGGDLMYHIQQ  114 (353)
T ss_dssp             CEE-EEEECSSEEE-EEEECCCSCBHHHHHHH
T ss_pred             eEE-EEEEcCCEEE-EEEeCCCCCcHHHHHHh
Confidence            999 9888888888 99999999999999864

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.03  E-value=2.8e-10  Score=100.14  Aligned_cols=88  Identities=18%  Similarity=0.261  Sum_probs=71.0

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceecc
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      ..+.|...+.||+|+||.||+             +... ++..||+|.+....  ..+ +.+|+.++..++|+||++++ 
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~-------------~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~-   90 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYK-------------AIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYY-   90 (314)
T ss_dssp             ---CEEEEEECC----CEEEE-------------EEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEE-
T ss_pred             chhhhhhheeeccCCCeEEEE-------------EEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEE-
Confidence            456688889999999999999             7655 48899999986532  234 99999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCcccccc
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~  258 (282)
                      +++...+..+ +||||+++|+|.+++.
T Consensus        91 ~~~~~~~~~~-lv~e~~~~~~L~~~~~  116 (314)
T 3com_A           91 GSYFKNTDLW-IVMEYCGAGSVSDIIR  116 (314)
T ss_dssp             EEEEETTEEE-EEEECCTTEEHHHHHH
T ss_pred             EEEEeCCEEE-EEeecCCCCCHHHHHH
Confidence            9999888888 9999999999999985

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.02  E-value=7.8e-11  Score=114.69  Aligned_cols=101  Identities=15%  Similarity=0.097  Sum_probs=78.8

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCccceeccc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      ++|...+.||+|+||.||+             +... ++..||+|.+....... .+ |.+|+.++..++||||++++ +
T Consensus        14 grY~i~~~LG~G~fG~Vyl-------------a~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~-~   79 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLR-------------WIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAR-E   79 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCC-------------CCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEE-E
T ss_pred             CCeEEEEEEeeCCCeEEEE-------------EEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCcee-e
Confidence            5688889999999999999             7654 58899999987543333 33 99999999999999999999 8


Q ss_pred             eEee------CCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          233 VVIR------PGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       233 ~~~~------~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      ++..      ++..+ +||||+++|+|.+++........+++...
T Consensus        80 v~~~~~~~~~~~~~~-LVmEy~~ggsL~~~L~~~~~~~~lse~~i  123 (676)
T 3qa8_A           80 VPDGLQKLAPNDLPL-LAMEYCEGGDLRKYLNQFENCCGLKEGPI  123 (676)
T ss_dssp             CCTTTCCCCTTSSCC-CEEECCSSCBHHHHHHSSSCTTCCCSSHH
T ss_pred             eecccccccCCCeEE-EEEEeCCCCCHHHHHHhcccCCCCCHHHH
Confidence            8654      55567 99999999999999976543334666544

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.02  E-value=1.4e-10  Score=104.78  Aligned_cols=113  Identities=12%  Similarity=0.070  Sum_probs=81.1

Q ss_pred             HHHHHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhHHHHHHHHhhhCC---CCc
Q 043820          149 ATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIFFARSVTEVAKIY---ARS  225 (282)
Q Consensus       149 ~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~---H~n  225 (282)
                      .+++...+.|...+.||+|+||.||++.....       .....+..||+|.+....  ..++..|+.++..++   |+|
T Consensus        58 ~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~-------~~~~~~~~vavK~~~~~~--~~~~~~e~~~~~~l~~~~~~~  128 (365)
T 3e7e_A           58 TEFQLGSKLVYVHHLLGEGAFAQVYEATQGDL-------NDAKNKQKFVLKVQKPAN--PWEFYIGTQLMERLKPSMQHM  128 (365)
T ss_dssp             CEEECSSSEEEEEEEEEECSSEEEEEEEC--------------CCCCEEEEEESSCC--HHHHHHHHHHHHHSCGGGGGG
T ss_pred             eeEEECCEEEEEEEEeeccCCEEEEEEEecCC-------cccccCcEEEEEEeCCCC--hhHHHHHHHHHHHhhhhhhhh
Confidence            34445667788889999999999999211000       023457899999986432  222778888877776   999


Q ss_pred             cceeccceEeeCCeEEEEEEecCCCCCccccccCCC--CCcCCCCCccc
Q 043820          226 RPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSS--RVRSLQYPDPA  272 (282)
Q Consensus       226 lv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~--~~~~l~W~~R~  272 (282)
                      +++++ +++...+..+ +||||+++|+|.++|....  ....++|..+.
T Consensus       129 iv~~~-~~~~~~~~~~-lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~  175 (365)
T 3e7e_A          129 FMKFY-SAHLFQNGSV-LVGELYSYGTLLNAINLYKNTPEKVMPQGLVI  175 (365)
T ss_dssp             BCCEE-EEEECSSCEE-EEECCCCSCBHHHHHHHHHTSTTCSCCHHHHH
T ss_pred             hhhhh-eeeecCCCcE-EEEeccCCCcHHHHHHHhhcccccCCCHHHHH
Confidence            99999 9999999988 9999999999999996421  12346665443

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.02  E-value=2.9e-10  Score=98.54  Aligned_cols=90  Identities=20%  Similarity=0.222  Sum_probs=73.0

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecC----CCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCccc
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI----DARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRP  227 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~----~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv  227 (282)
                      ..++|...+.||+|+||.||+             +...    .+..||+|.+....... .+ |.+|+.++..++||||+
T Consensus        10 ~~~~y~~~~~lg~G~~g~Vy~-------------~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~   76 (281)
T 3cc6_A           10 AREDVVLNRILGEGFFGEVYE-------------GVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV   76 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEE-------------EEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBC
T ss_pred             cccceEEEEEEEecCCeeEEE-------------eEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcc
Confidence            456788889999999999999             6532    23469999997653333 33 99999999999999999


Q ss_pred             eeccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          228 RSYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       228 ~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +++ +++.. +..+ +||||+++|+|.+++..
T Consensus        77 ~~~-~~~~~-~~~~-~v~e~~~~~~L~~~l~~  105 (281)
T 3cc6_A           77 KLI-GIIEE-EPTW-IIMELYPYGELGHYLER  105 (281)
T ss_dssp             CEE-EEECS-SSCE-EEEECCTTCBHHHHHHH
T ss_pred             eEE-EEEcC-CCCE-EEEecCCCCCHHHHHHh
Confidence            999 98754 4456 99999999999999864

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.02  E-value=1.5e-10  Score=105.43  Aligned_cols=90  Identities=9%  Similarity=0.051  Sum_probs=68.3

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc---hhH-HHHHHHH-hhhCCCCccce
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT---GIF-FARSVTE-VAKIYARSRPR  228 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~---~~~-f~~e~~~-l~~l~H~nlv~  228 (282)
                      .++|...+.||+|+||.||+             +... ++..||+|.+......   ... +.+|..+ +..++|||||+
T Consensus        37 ~~~y~~~~~lG~G~fg~V~~-------------~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~  103 (373)
T 2r5t_A           37 PSDFHFLKVIGKGSFGKVLL-------------ARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG  103 (373)
T ss_dssp             GGGEEEEEEEECCTTCEEEE-------------EEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCC
T ss_pred             hhheEEEEEEeeCCCeEEEE-------------EEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            35688889999999999999             7654 5789999999754321   223 6777776 57789999999


Q ss_pred             eccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          229 SYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       229 l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ++ +++...+..+ +||||+++|+|.+++..
T Consensus       104 l~-~~~~~~~~~~-lv~E~~~gg~L~~~l~~  132 (373)
T 2r5t_A          104 LH-FSFQTADKLY-FVLDYINGGELFYHLQR  132 (373)
T ss_dssp             EE-EEEECSSEEE-EEEECCCSCBHHHHHHH
T ss_pred             EE-EEEEeCCEEE-EEEeCCCCCcHHHHHHh
Confidence            99 9998888888 99999999999998864

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.02  E-value=2.2e-10  Score=99.02  Aligned_cols=97  Identities=16%  Similarity=0.095  Sum_probs=75.8

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhHHHHHHHHhhhCCCCccceeccceE
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRPRSYPSVV  234 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~nlv~l~~g~~  234 (282)
                      .+|...+.||+|+||.||+             +... ++..||+|.+....   ..+.+|+.++..++||||++++ +++
T Consensus        11 ~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l~h~~i~~~~-~~~   73 (284)
T 2a19_B           11 MDFKEIELIGSGGFGQVFK-------------AKHRIDGKTYVIKRVKYNN---EKAEREVKALAKLDHVNIVHYN-GCW   73 (284)
T ss_dssp             HHEEEEEEEECSSSCCEEE-------------EEETTTCCEEEEEEEECCS---GGGHHHHHHHHHCCCTTBCCEE-EEE
T ss_pred             cccceeeeeccCCceEEEE-------------EEEcCCCeEEEEEEecccc---HHHHHHHHHHHhCCCCCEEEEe-eeE
Confidence            4577889999999999999             7765 68999999986432   2288999999999999999999 987


Q ss_pred             ee----------------CCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          235 IR----------------PGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       235 ~~----------------~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      ..                ....+ +||||+++|+|.+++.... ...++|..+
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~-lv~e~~~~~~L~~~l~~~~-~~~~~~~~~  124 (284)
T 2a19_B           74 DGFDYDPETSSKNSSRSKTKCLF-IQMEFCDKGTLEQWIEKRR-GEKLDKVLA  124 (284)
T ss_dssp             EEEEEC---------CCEEEEEE-EEECCCCSCBHHHHHHHGG-GSCCCHHHH
T ss_pred             eccccCcccccccccccCcceEE-EEEeccCCCCHHHHHhhcc-CCCCCHHHH
Confidence            54                23345 9999999999999996432 123555433

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.02  E-value=3.2e-10  Score=98.99  Aligned_cols=89  Identities=22%  Similarity=0.249  Sum_probs=72.5

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch--hH-HHHHHHHhhhCCCCccceecc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG--IF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      ++|...+.||+|+||.||+             +... ++..||+|.+.......  .. +.+|+.++.+++|+||++++ 
T Consensus         3 ~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~-   68 (299)
T 2r3i_A            3 ENFQKVEKIGEGTYGVVYK-------------ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL-   68 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEE-------------EEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEE-
T ss_pred             chhhhhhhhccCCCeeEEE-------------EEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEE-
Confidence            5678889999999999999             7654 58899999986543222  23 89999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +++...+..+ +||||++ |+|.+++...
T Consensus        69 ~~~~~~~~~~-lv~e~~~-~~L~~~~~~~   95 (299)
T 2r3i_A           69 DVIHTENKLY-LVFEFLH-QDLKKFMDAS   95 (299)
T ss_dssp             EEEEETTEEE-EEEECCS-EEHHHHHHHT
T ss_pred             EEEecCCceE-EEEEccc-CCHHHHHHhh
Confidence            9999888888 9999998 6999988644

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.02  E-value=1.8e-10  Score=112.43  Aligned_cols=101  Identities=17%  Similarity=0.153  Sum_probs=78.3

Q ss_pred             HhccCccccceecccCccceeccccccccccccceeecC----CCcEEEEEEccCCCCchh-H-HHHHHHHhhhCCCCcc
Q 043820          153 NATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI----DARVVAARIVFAGSVTGI-F-FARSVTEVAKIYARSR  226 (282)
Q Consensus       153 ~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~----~~~~vAvK~l~~~~~~~~-~-f~~e~~~l~~l~H~nl  226 (282)
                      ...++|...+.||+|+||.||+             |...    .+..||+|.+........ + |.+|+.+|.+++||||
T Consensus       387 i~~~~y~i~~~LG~G~fG~Vy~-------------a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnI  453 (656)
T 2j0j_A          387 IQRERIELGRCIGEGQFGDVHQ-------------GIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI  453 (656)
T ss_dssp             CCGGGEEEEEEEECCSSCCEEE-------------EEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             cccccEEEeeEEeeCCCEEEEE-------------EEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCC
Confidence            3445677788999999999999             7643    256799999875443333 4 9999999999999999


Q ss_pred             ceeccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          227 PRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       227 v~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      ++++ |++. .+..+ +||||+++|+|.+++....  ..++|..+
T Consensus       454 v~l~-~~~~-~~~~~-lv~E~~~~g~L~~~l~~~~--~~l~~~~~  493 (656)
T 2j0j_A          454 VKLI-GVIT-ENPVW-IIMELCTLGELRSFLQVRK--FSLDLASL  493 (656)
T ss_dssp             CCEE-EEEC-SSSCE-EEEECCTTCBHHHHHHHTT--TTCCHHHH
T ss_pred             CeEE-EEEe-cCceE-EEEEcCCCCcHHHHHHhcc--CCCCHHHH
Confidence            9999 9885 45566 9999999999999996433  23555544

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.02  E-value=2e-10  Score=102.18  Aligned_cols=107  Identities=14%  Similarity=0.089  Sum_probs=80.8

Q ss_pred             HHHHHHhccCcccc-ceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc--hhH-HHHHHHHhhhC-
Q 043820          148 LATIANATDNFSIN-NKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT--GIF-FARSVTEVAKI-  221 (282)
Q Consensus       148 ~~el~~at~~f~~~-~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~--~~~-f~~e~~~l~~l-  221 (282)
                      +...+.-.+.|... +.||+|+||.||+             +... ++..||+|.+......  ... +.+|+.++..+ 
T Consensus        20 ~~~~~~~~~~y~~~~~~lG~G~~g~V~~-------------~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~   86 (327)
T 3lm5_A           20 FQSMENFNNFYILTSKELGRGKFAVVRQ-------------CISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAK   86 (327)
T ss_dssp             SBCHHHHHHHEEEEEEEEEEETTEEEEE-------------EEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTT
T ss_pred             HHHHHhhhhEEeeccceeCCCCCeEEEE-------------EEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhcc
Confidence            33334444445554 7899999999999             7654 5899999998753322  234 99999999999 


Q ss_pred             CCCccceeccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCc
Q 043820          222 YARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPD  270 (282)
Q Consensus       222 ~H~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~  270 (282)
                      +|+||++++ +++...+..+ +||||+++|+|.+++.... ...+++..
T Consensus        87 ~~~~iv~~~-~~~~~~~~~~-lv~e~~~~~~L~~~~~~~~-~~~~~~~~  132 (327)
T 3lm5_A           87 SCPRVINLH-EVYENTSEII-LILEYAAGGEIFSLCLPEL-AEMVSEND  132 (327)
T ss_dssp             TCTTBCCEE-EEEECSSEEE-EEEECCTTEEGGGGGSSCC--CCCCHHH
T ss_pred             CCCCEEEEE-EEEEeCCeEE-EEEEecCCCcHHHHHHHhc-ccCCCHHH
Confidence            569999999 9998888888 9999999999999986543 12355443

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.02  E-value=1.4e-10  Score=101.19  Aligned_cols=90  Identities=17%  Similarity=0.177  Sum_probs=70.8

Q ss_pred             ccCccccc-eecccCccceeccccccccccccceeec--C-CCcEEEEEEccCCCCch--hH-HHHHHHHhhhCCCCccc
Q 043820          155 TDNFSINN-KLGEGGFGPVYKVVAAGICFAGTITGAR--I-DARVVAARIVFAGSVTG--IF-FARSVTEVAKIYARSRP  227 (282)
Q Consensus       155 t~~f~~~~-~lG~G~fG~Vy~~~~~~~~~~~~~~g~~--~-~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l~H~nlv  227 (282)
                      .+.|.... .||+|+||.||+             +..  . .+..||+|.+.......  .+ |.+|+.++..++|+||+
T Consensus        15 ~~~y~~~~~~lg~G~~g~Vy~-------------~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~   81 (291)
T 1xbb_A           15 RKLLTLEDKELGSGNFGTVKK-------------GYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV   81 (291)
T ss_dssp             GGGEEEEEEEEEECSSEEEEE-------------EEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBC
T ss_pred             chhhhhccCccccccCeeeEe-------------eeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEE
Confidence            44566666 999999999999             743  2 36789999987543222  34 99999999999999999


Q ss_pred             eeccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          228 RSYPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       228 ~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +++ +++ ..+..+ +||||+++|+|.+++...
T Consensus        82 ~~~-~~~-~~~~~~-lv~e~~~~~~L~~~l~~~  111 (291)
T 1xbb_A           82 RMI-GIC-EAESWM-LVMEMAELGPLNKYLQQN  111 (291)
T ss_dssp             CEE-EEE-ESSSEE-EEEECCTTEEHHHHHHHC
T ss_pred             EEE-EEE-CCCCcE-EEEEeCCCCCHHHHHHhC
Confidence            999 988 566667 999999999999998653

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.02  E-value=4.6e-11  Score=105.34  Aligned_cols=106  Identities=18%  Similarity=0.171  Sum_probs=83.9

Q ss_pred             CHHHHHHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCc--hhH-HHHHHHHhhhCCC
Q 043820          147 ELATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVT--GIF-FARSVTEVAKIYA  223 (282)
Q Consensus       147 ~~~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~--~~~-f~~e~~~l~~l~H  223 (282)
                      ...++....++|...+.||+|+||.||+             +....  .+|+|.+......  ..+ |.+|+.++..++|
T Consensus        24 ~~~~~~i~~~~~~~~~~lg~G~~g~V~~-------------~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h   88 (319)
T 2y4i_B           24 FLQEWDIPFEQLEIGELIGKGRFGQVYH-------------GRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRH   88 (319)
T ss_dssp             CGGGSSSCCSCEECCCBCCCSSSSEEEE-------------EEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCC
T ss_pred             ccccccCCHHHeEEeeEeccCCceEEEE-------------EEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCC
Confidence            3445555667888889999999999999             76543  5999998754322  223 8999999999999


Q ss_pred             CccceeccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          224 RSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       224 ~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      +||++++ +++...+..+ +||||+++|+|.+++....  ..+++...
T Consensus        89 ~~iv~~~-~~~~~~~~~~-iv~e~~~~~~L~~~l~~~~--~~~~~~~~  132 (319)
T 2y4i_B           89 ENVVLFM-GACMSPPHLA-IITSLCKGRTLYSVVRDAK--IVLDVNKT  132 (319)
T ss_dssp             TTBCCCC-EEEECSSCEE-EECBCCCSEEHHHHTTSSC--CCCCSHHH
T ss_pred             CCEeEEE-EEEecCCceE-EEeecccCCcHHHHHHhcC--CCCCHHHH
Confidence            9999999 9999888888 9999999999999997543  24555544

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.02  E-value=4.2e-10  Score=101.89  Aligned_cols=93  Identities=9%  Similarity=0.005  Sum_probs=77.7

Q ss_pred             HHhccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc--------hhH-HHHHHHHhhhC
Q 043820          152 ANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT--------GIF-FARSVTEVAKI  221 (282)
Q Consensus       152 ~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~--------~~~-f~~e~~~l~~l  221 (282)
                      ....++|...+.||+|+||.||+             +... +|..||||.+......        ..+ +.+|+.++.++
T Consensus        90 ~~~~~~y~~~~~lg~G~~g~Vy~-------------a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l  156 (365)
T 2y7j_A           90 KEFYQKYDPKDVIGRGVSSVVRR-------------CVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQV  156 (365)
T ss_dssp             HHHHHHEEEEEEEEECSSEEEEE-------------EEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhcccceEEecCCCEEEEE-------------EEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHh
Confidence            34456688889999999999999             8765 6899999998654321        123 88999999999


Q ss_pred             -CCCccceeccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          222 -YARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       222 -~H~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                       +||||++++ +++......+ +||||+++|+|.+++..
T Consensus       157 ~~hp~iv~~~-~~~~~~~~~~-lv~e~~~g~~L~~~l~~  193 (365)
T 2y7j_A          157 AGHPHIITLI-DSYESSSFMF-LVFDLMRKGELFDYLTE  193 (365)
T ss_dssp             TTCTTBCCEE-EEEEBSSEEE-EEECCCTTCBHHHHHHH
T ss_pred             cCCCCEeEEE-EEEeeCCEEE-EEEEeCCCCcHHHHHHh
Confidence             899999999 9998888888 99999999999999864

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.01  E-value=3.3e-10  Score=99.57  Aligned_cols=88  Identities=13%  Similarity=0.127  Sum_probs=67.4

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      +.|...+.||+|+||.||+             +... .+..||+|.+........+ +.+|+.++..++|+||++++ ++
T Consensus        11 ~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~-~~   76 (320)
T 2i6l_A           11 SRYMDLKPLGCGGNGLVFS-------------AVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVF-EI   76 (320)
T ss_dssp             TTEEEEEECC-----CEEE-------------EEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEE-EE
T ss_pred             CceeEEEEeccCCCeEEEE-------------EEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEE-Ee
Confidence            4677889999999999999             7765 4889999998755444445 99999999999999999999 87


Q ss_pred             Ee--------------eCCeEEEEEEecCCCCCccccccC
Q 043820          234 VI--------------RPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       234 ~~--------------~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +.              .....+ +||||++ |+|.+++..
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~-lv~e~~~-~~L~~~~~~  114 (320)
T 2i6l_A           77 LGPSGSQLTDDVGSLTELNSVY-IVQEYME-TDLANVLEQ  114 (320)
T ss_dssp             ECTTSCBCCC----CCSCSEEE-EEEECCS-EEHHHHHTT
T ss_pred             ccccccccccccccccccCcee-EEeeccC-CCHHHHhhc
Confidence            63              234556 9999998 699998854

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.01  E-value=1.2e-10  Score=104.21  Aligned_cols=92  Identities=14%  Similarity=0.202  Sum_probs=76.3

Q ss_pred             ccCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCc--------hhH-HHHHHHHhhhCCCC
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVT--------GIF-FARSVTEVAKIYAR  224 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~--------~~~-f~~e~~~l~~l~H~  224 (282)
                      .++|...+.||+|+||.||+             +.. .++..||+|.+......        ... +.+|+.++..++|+
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~-------------a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~   89 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFGFVWT-------------AVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHA   89 (335)
T ss_dssp             HHHEEEEEECSSSSSCSEEE-------------EEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCT
T ss_pred             ccceEEEeEEEecCCEEEEE-------------EEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCC
Confidence            34678889999999999999             764 46889999998754321        223 88999999999999


Q ss_pred             ccceeccceEeeCCeEEEEEEecCCCC-CccccccCCC
Q 043820          225 SRPRSYPSVVIRPGYKVGLILELKPDP-DPNPDRLHSS  261 (282)
Q Consensus       225 nlv~l~~g~~~~~~~~~~lv~Ey~~~G-sL~~~l~~~~  261 (282)
                      ||++++ +++...+..+ +||||+.+| +|.+++....
T Consensus        90 ~Iv~~~-~~~~~~~~~~-lv~e~~~~g~~l~~~~~~~~  125 (335)
T 3dls_A           90 NIIKVL-DIFENQGFFQ-LVMEKHGSGLDLFAFIDRHP  125 (335)
T ss_dssp             TBCCEE-EEEECSSEEE-EEEECCTTSCBHHHHHHTCC
T ss_pred             CEeeEE-EEEeeCCEEE-EEEEeCCCCccHHHHHHhcC
Confidence            999999 9998888888 999999887 9999886543

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.00  E-value=1.1e-10  Score=103.75  Aligned_cols=89  Identities=19%  Similarity=0.206  Sum_probs=72.2

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH--HHHHHHHhhhCCCCccceeccc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF--FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~--f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      ++|...+.||+|+||.||+             +... ++..||+|.+.........  +.+|+.++..++|+||++++ +
T Consensus         2 ~~y~~~~~lG~G~~g~V~~-------------~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~-~   67 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYK-------------GKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLH-D   67 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEE-------------EEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEE-E
T ss_pred             CceEEEEEEcCCCCEEEEE-------------EEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeee-e
Confidence            4677789999999999999             7755 5889999998754433322  77899999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ++...+..+ +||||++ |+|.+++...
T Consensus        68 ~~~~~~~~~-lv~e~~~-~~l~~~~~~~   93 (324)
T 3mtl_A           68 IIHTEKSLT-LVFEYLD-KDLKQYLDDC   93 (324)
T ss_dssp             EEECSSCEE-EEEECCS-EEHHHHHHHT
T ss_pred             EEeeCCEEE-EEecccc-cCHHHHHHhc
Confidence            998888888 9999998 5888887653

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.00  E-value=3.9e-10  Score=100.26  Aligned_cols=96  Identities=20%  Similarity=0.232  Sum_probs=77.9

Q ss_pred             cCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCchhH-HHHHHHHhhhC-CCCccceeccc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVTGIF-FARSVTEVAKI-YARSRPRSYPS  232 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l-~H~nlv~l~~g  232 (282)
                      ++|...+.||+|+||.||+             +.. .++..||+|.+....  ... +.+|+.++..+ +|+||++++ +
T Consensus         9 ~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~-~   72 (330)
T 2izr_A            9 PNFRVGKKIGCGNFGELRL-------------GKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVY-Y   72 (330)
T ss_dssp             TTEEEEEECCC-CTTSEEE-------------EEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEE-E
T ss_pred             CCeEEEEEeeccCCceEEE-------------EEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEE-E
Confidence            5688889999999999999             764 468899999986432  233 99999999999 999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      ++..++..+ +||||+ +|+|.+++....  ..++|...
T Consensus        73 ~~~~~~~~~-lv~e~~-~~~L~~~~~~~~--~~~~~~~~  107 (330)
T 2izr_A           73 FGPCGKYNA-MVLELL-GPSLEDLFDLCD--RTFSLKTV  107 (330)
T ss_dssp             EEEETTEEE-EEEECC-CCBHHHHHHHTT--TCCCHHHH
T ss_pred             EEecCCccE-EEEEeC-CCCHHHHHHHcC--CCCCHHHH
Confidence            999888888 999999 999999987432  23555443

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.00  E-value=1.5e-10  Score=104.44  Aligned_cols=89  Identities=13%  Similarity=0.111  Sum_probs=74.8

Q ss_pred             cCccccceecccCccceeccccccccccccceeec----CCCcEEEEEEccCCC----CchhH-HHHHHHHhhhC-CCCc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR----IDARVVAARIVFAGS----VTGIF-FARSVTEVAKI-YARS  225 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~----~~~~~vAvK~l~~~~----~~~~~-f~~e~~~l~~l-~H~n  225 (282)
                      ++|...+.||+|+||.||+             +..    ..+..||+|.+....    ....+ +.+|+.++..+ +|+|
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~-------------~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~  120 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFL-------------VRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPF  120 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEE-------------EEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTT
T ss_pred             cceEEEEEeccCCCEEEEE-------------EEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCc
Confidence            5688889999999999999             654    358899999986432    12233 88899999999 7999


Q ss_pred             cceeccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          226 RPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       226 lv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      |++++ +++......+ +||||+++|+|.+++..
T Consensus       121 iv~~~-~~~~~~~~~~-lv~e~~~~~~L~~~l~~  152 (355)
T 1vzo_A          121 LVTLH-YAFQTETKLH-LILDYINGGELFTHLSQ  152 (355)
T ss_dssp             BCCEE-EEEEETTEEE-EEECCCCSCBHHHHHHH
T ss_pred             eeEEE-EEEeeCceEE-EEeecCCCCCHHHHHHH
Confidence            99999 9998888888 99999999999999864

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=98.99  E-value=3.7e-10  Score=101.25  Aligned_cols=101  Identities=16%  Similarity=0.137  Sum_probs=74.3

Q ss_pred             HhccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch-----hH-HHHHHHHhhhCCCCc
Q 043820          153 NATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG-----IF-FARSVTEVAKIYARS  225 (282)
Q Consensus       153 ~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~-----~~-f~~e~~~l~~l~H~n  225 (282)
                      ...++|...+.||+|+||.||+             +... ++..||+|.+.......     .+ +.+|+.++..++|+|
T Consensus         7 ~~~~~y~~~~~lg~G~~g~Vy~-------------~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~   73 (346)
T 1ua2_A            7 SRAKRYEKLDFLGEGQFATVYK-------------ARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPN   73 (346)
T ss_dssp             ------CEEEEEEEETTEEEEE-------------EECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTT
T ss_pred             HHhcccEEEeEEeecCCEEEEE-------------EEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCC
Confidence            3456788889999999999999             7764 58899999997432211     23 889999999999999


Q ss_pred             cceeccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          226 RPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       226 lv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      |++++ +++...+..+ +||||+++ +|.+++....  ..+++...
T Consensus        74 iv~~~-~~~~~~~~~~-lv~e~~~~-~l~~~~~~~~--~~~~~~~~  114 (346)
T 1ua2_A           74 IIGLL-DAFGHKSNIS-LVFDFMET-DLEVIIKDNS--LVLTPSHI  114 (346)
T ss_dssp             BCCEE-EEECCTTCCE-EEEECCSE-EHHHHHTTCC--SSCCSSHH
T ss_pred             CCeEE-EEEeeCCceE-EEEEcCCC-CHHHHHHhcC--cCCCHHHH
Confidence            99999 9998888888 99999996 8888886543  24555543

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=98.98  E-value=4.6e-10  Score=100.51  Aligned_cols=90  Identities=18%  Similarity=0.224  Sum_probs=75.8

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCch--hH-HHHHHHHhhhCCC--Ccccee
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTG--IF-FARSVTEVAKIYA--RSRPRS  229 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l~H--~nlv~l  229 (282)
                      .+.|...+.||+|+||.||+             +...++..||+|.+.......  .+ |.+|+.++..++|  +||+++
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~-------------~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~   74 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQ-------------VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL   74 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEE-------------EECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCE
T ss_pred             cCEEEEEEEEecCCCeEEEE-------------EEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEE
Confidence            34578889999999999999             877778999999987543332  24 9999999999976  999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      + +++......+ +||| +.+|+|.+++...
T Consensus        75 ~-~~~~~~~~~~-lv~e-~~~~~L~~~l~~~  102 (343)
T 3dbq_A           75 Y-DYEITDQYIY-MVME-CGNIDLNSWLKKK  102 (343)
T ss_dssp             E-EEEECSSEEE-EEEC-CCSEEHHHHHHHS
T ss_pred             e-eeEeeCCEEE-EEEe-CCCCCHHHHHHhc
Confidence            9 9999888888 9999 5788999998753

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=98.98  E-value=8.5e-11  Score=104.85  Aligned_cols=89  Identities=18%  Similarity=0.157  Sum_probs=66.8

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCC--------chhH-HHHHHHHhhhCC---
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSV--------TGIF-FARSVTEVAKIY---  222 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~--------~~~~-f~~e~~~l~~l~---  222 (282)
                      .++|...+.||+|+||.||+             +.. ++..||+|.+.....        ...+ +.+|+.++..++   
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~-------------~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~   84 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQ-------------TIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLS   84 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEE-------------EEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGG
T ss_pred             cccchheeeecccCceEEEE-------------EEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhh
Confidence            35577789999999999999             776 679999999975421        1124 889999988886   


Q ss_pred             ------CCccceeccceEe-----------------e-------------CCeEEEEEEecCCCCCccccccC
Q 043820          223 ------ARSRPRSYPSVVI-----------------R-------------PGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       223 ------H~nlv~l~~g~~~-----------------~-------------~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                            |+|+|++. +.+.                 .             .+..+ |||||+++|++.+.+..
T Consensus        85 ~~~~~~h~niv~l~-~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~-lv~E~~~~g~ll~~~~~  155 (336)
T 2vuw_A           85 GEVCNRTEGFIGLN-SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLF-IVLEFEFGGIDLEQMRT  155 (336)
T ss_dssp             GCSSSBCCCBCCEE-EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEE-EEEEEECCCEETGGGTT
T ss_pred             ccccccCCchhhhc-ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEE-EEEEecCCCccHHHHHh
Confidence                  66666666 5432                 2             55666 99999999987777743

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=98.97  E-value=3.3e-10  Score=100.47  Aligned_cols=87  Identities=14%  Similarity=0.166  Sum_probs=69.4

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH-HHHHHHHhhh--CCCCccceec
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF-FARSVTEVAK--IYARSRPRSY  230 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~--l~H~nlv~l~  230 (282)
                      ..++|...+.||+|+||.||+             +... +..||+|.+...   ... +..|..++..  ++|+||++++
T Consensus        35 ~~~~y~~~~~lg~G~~g~V~~-------------~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~   97 (337)
T 3mdy_A           35 IAKQIQMVKQIGKGRYGEVWM-------------GKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFI   97 (337)
T ss_dssp             HHHHCEEEEEEEEETTEEEEE-------------EEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEE
T ss_pred             cccceEEEeEeecCCCeEEEE-------------EEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEE
Confidence            345788889999999999999             8764 789999998532   222 5555555554  4999999999


Q ss_pred             cceEeeC----CeEEEEEEecCCCCCccccccC
Q 043820          231 PSVVIRP----GYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       231 ~g~~~~~----~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                       +++...    ...+ +||||+++|+|.+++..
T Consensus        98 -~~~~~~~~~~~~~~-lv~e~~~~g~L~~~l~~  128 (337)
T 3mdy_A           98 -AADIKGTGSWTQLY-LITDYHENGSLYDYLKS  128 (337)
T ss_dssp             -EEEEESCGGGCEEE-EEECCCTTCBHHHHHHH
T ss_pred             -EEEccCCCCCCceE-EEEeccCCCcHHHHhhc
Confidence             998877    5666 99999999999999854

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=98.96  E-value=9.7e-10  Score=97.36  Aligned_cols=85  Identities=15%  Similarity=0.212  Sum_probs=72.0

Q ss_pred             cCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCchhH-HHHHHHHhhhCC-CCccceeccc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVTGIF-FARSVTEVAKIY-ARSRPRSYPS  232 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~-H~nlv~l~~g  232 (282)
                      ++|...+.||+|+||.||+             +.. .++..||+|.+...   ..+ +.+|+.++..++ |+||++++ +
T Consensus        36 ~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~-~   98 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFE-------------AINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLA-D   98 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEE-------------EEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEE-E
T ss_pred             CceEEEEEecccCCeEEEE-------------EEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEee-e
Confidence            5678889999999999999             764 46889999998632   234 999999999996 99999999 9


Q ss_pred             eEee--CCeEEEEEEecCCCCCcccccc
Q 043820          233 VVIR--PGYKVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       233 ~~~~--~~~~~~lv~Ey~~~GsL~~~l~  258 (282)
                      ++..  ....+ +||||+++++|.+++.
T Consensus        99 ~~~~~~~~~~~-lv~e~~~~~~l~~~~~  125 (330)
T 3nsz_A           99 IVKDPVSRTPA-LVFEHVNNTDFKQLYQ  125 (330)
T ss_dssp             EEECTTTCCEE-EEEECCCCCCHHHHGG
T ss_pred             eeccCCCCceE-EEEeccCchhHHHHHH
Confidence            9887  45566 9999999999998874

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=98.96  E-value=6.6e-10  Score=101.57  Aligned_cols=89  Identities=18%  Similarity=0.230  Sum_probs=74.8

Q ss_pred             cCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCc--hhH-HHHHHHHhhhCC--CCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVT--GIF-FARSVTEVAKIY--ARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~--~~~-f~~e~~~l~~l~--H~nlv~l~  230 (282)
                      +.|...+.||+|+||.||+             +....+..||||.+......  ..+ |.+|+.+|..++  |+|||+++
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~-------------~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~  122 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQ-------------VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY  122 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEE-------------EECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEE
T ss_pred             CceEEEEEEccCCCeEEEE-------------EEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEE
Confidence            3488889999999999999             87767899999998654332  223 999999999996  59999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                       +++...+..+ +||| +.+|+|.++|...
T Consensus       123 -~~~~~~~~~~-lv~E-~~~~~L~~~l~~~  149 (390)
T 2zmd_A          123 -DYEITDQYIY-MVME-CGNIDLNSWLKKK  149 (390)
T ss_dssp             -EEEECSSEEE-EEEE-CCSEEHHHHHHHC
T ss_pred             -EEEecCCEEE-EEEe-cCCCCHHHHHHhc
Confidence             9999888888 9999 6788999998654

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=98.95  E-value=7.5e-10  Score=98.47  Aligned_cols=87  Identities=13%  Similarity=0.118  Sum_probs=73.0

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH-HHHHHHHhhh--CCCCccceec
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF-FARSVTEVAK--IYARSRPRSY  230 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~--l~H~nlv~l~  230 (282)
                      ..++|...+.||+|+||.||+             +.. ++..||+|.+...   ... +.+|..++..  ++|+||++++
T Consensus        40 ~~~~y~~~~~lg~G~~g~Vy~-------------~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~  102 (342)
T 1b6c_B           40 IARTIVLQESIGKGRFGEVWR-------------GKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFI  102 (342)
T ss_dssp             HHHHCEEEEEEEEETTEEEEE-------------EEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEE
T ss_pred             ccccEEEEeeecCCCCcEEEE-------------EEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEE
Confidence            345688889999999999999             776 5789999998532   234 8888888887  7999999999


Q ss_pred             cceEeeCC----eEEEEEEecCCCCCccccccC
Q 043820          231 PSVVIRPG----YKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       231 ~g~~~~~~----~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                       +++....    ..+ +||||+++|+|.+++..
T Consensus       103 -~~~~~~~~~~~~~~-lv~e~~~~g~L~~~l~~  133 (342)
T 1b6c_B          103 -AADNKDNGTWTQLW-LVSDYHEHGSLFDYLNR  133 (342)
T ss_dssp             -EEEECCCSSCCCEE-EEECCCTTCBHHHHHHH
T ss_pred             -eeecccCCccceeE-EEEeecCCCcHHHHHhc
Confidence             9988765    566 99999999999999854

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=98.95  E-value=1.4e-10  Score=102.81  Aligned_cols=107  Identities=15%  Similarity=0.081  Sum_probs=79.0

Q ss_pred             HHHhccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCC-CCccc
Q 043820          151 IANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIY-ARSRP  227 (282)
Q Consensus       151 l~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~-H~nlv  227 (282)
                      +.....+|...+.||+|+||.||+             +... ++..||+|.+........+ +.+|+.++.++. |+||+
T Consensus        23 ~~~~~~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv   89 (337)
T 3ll6_A           23 VELGELRLRVRRVLAEGGFAFVYE-------------AQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIV   89 (337)
T ss_dssp             EEETTEEEEEEEEEECCSSEEEEE-------------EEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBC
T ss_pred             eeccCceEEEEEEEccCCceEEEE-------------EEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChh
Confidence            333445688889999999999999             7744 6889999998655444445 999999999995 99999


Q ss_pred             eeccceEe-------eCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          228 RSYPSVVI-------RPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       228 ~l~~g~~~-------~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      +++ +++.       .....++++|||++ |+|.+++........++|....
T Consensus        90 ~~~-~~~~~~~~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~  139 (337)
T 3ll6_A           90 QFC-SAASIGKEESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVL  139 (337)
T ss_dssp             CEE-EEEEECTTTSTTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHH
T ss_pred             hcc-ccccccccccccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHH
Confidence            999 9884       22333349999996 7999988642222346665443

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=98.95  E-value=7.8e-10  Score=102.39  Aligned_cols=90  Identities=21%  Similarity=0.251  Sum_probs=73.6

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc--hhH-HHHHHHHhhhCCCCccceec
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT--GIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~--~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      .++|...+.||+|+||.||+             +... .+..||+|++......  ..+ +.+|+.+|..++|+||++++
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~-------------a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~   91 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYL-------------AYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLY   91 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEE-------------EEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             cCCEEEEEEEeecCCEEEEE-------------EEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEE
Confidence            45788889999999999999             7654 5789999999754332  233 99999999999999999999


Q ss_pred             cceEeeC-----CeEEEEEEecCCCCCccccccCC
Q 043820          231 PSVVIRP-----GYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       231 ~g~~~~~-----~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                       +++...     ...+ +||||++ |+|.+++...
T Consensus        92 -~~~~~~~~~~~~~~~-lv~e~~~-~~L~~~~~~~  123 (432)
T 3n9x_A           92 -DLIIPDDLLKFDELY-IVLEIAD-SDLKKLFKTP  123 (432)
T ss_dssp             -EECCCSCTTTCCCEE-EEEECCS-EEHHHHHHSS
T ss_pred             -EEEecCCCCcCCeEE-EEEecCC-cCHHHHHhcc
Confidence             988765     4566 9999988 5999998653

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=98.95  E-value=7.6e-10  Score=96.05  Aligned_cols=90  Identities=16%  Similarity=0.144  Sum_probs=70.4

Q ss_pred             hccCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCchhH---HHHHHHHhhhCCCCcccee
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVTGIF---FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~~~~---f~~e~~~l~~l~H~nlv~l  229 (282)
                      ..++|...+.||+|+||.||+             +.. .++..||+|.+.........   +.++...+..++||||+++
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~   71 (290)
T 3fme_A            5 KADDLEPIMELGRGAYGVVEK-------------MRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTF   71 (290)
T ss_dssp             CGGGEEEEEEEEECSSEEEEE-------------EEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             cHHhhhhHHhcCCCCCeEEEE-------------EEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEE
Confidence            346788889999999999999             765 46889999999754333322   5555566888999999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      + +++...+..+ +||||++ |+|.+++..
T Consensus        72 ~-~~~~~~~~~~-lv~e~~~-~~l~~~l~~   98 (290)
T 3fme_A           72 Y-GALFREGDVW-ICMELMD-TSLDKFYKQ   98 (290)
T ss_dssp             E-EEEECSSSEE-EEEECCS-EEHHHHHHH
T ss_pred             e-eeeeccCCEE-EEEehhc-cchHHHHHH
Confidence            9 9999888888 9999998 588777653

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=98.95  E-value=6.6e-10  Score=100.71  Aligned_cols=89  Identities=12%  Similarity=0.084  Sum_probs=66.5

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch--hH-HHHHHHHhhhCCCCccceec
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG--IF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      .+.|...+.||+|+||.||+             +... +|..||+|.+.......  .+ +.+|+.++..++|+||++++
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~-------------a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~   90 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCS-------------AVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLL   90 (367)
T ss_dssp             BSSEEEEEEC------CEEE-------------EEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCS
T ss_pred             cceEEEeEEeeecCCeEEEE-------------EEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCce
Confidence            45688889999999999999             7654 58999999996533222  23 89999999999999999999


Q ss_pred             cceEeeCC------eEEEEEEecCCCCCccccccC
Q 043820          231 PSVVIRPG------YKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       231 ~g~~~~~~------~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                       +++....      ..+ +||||+ +++|.+++..
T Consensus        91 -~~~~~~~~~~~~~~~~-lv~e~~-~~~L~~~~~~  122 (367)
T 1cm8_A           91 -DVFTPDETLDDFTDFY-LVMPFM-GTDLGKLMKH  122 (367)
T ss_dssp             -EEECSCSSTTTCCCCE-EEEECC-SEEHHHHHHH
T ss_pred             -eeEecCCccccCceEE-EEEecC-CCCHHHHHhc
Confidence             9887653      236 999999 8899988864

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=98.94  E-value=6.9e-10  Score=103.32  Aligned_cols=90  Identities=18%  Similarity=0.249  Sum_probs=63.9

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc--hhH-HHHHHHHhhhCCCCccceec
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT--GIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~--~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      .++|...+.||+|+||.||+             +... .+..||+|.+......  ..+ +.+|+.+|..++|+|||+++
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~-------------~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~  118 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCE-------------AYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVL  118 (458)
T ss_dssp             CTTEEECCC-------CEEE-------------EEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CCCeEEeeEeeecCCeEEEE-------------EEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceE
Confidence            35688889999999999999             7644 5889999998654332  233 99999999999999999999


Q ss_pred             cceEeeC-----CeEEEEEEecCCCCCccccccCC
Q 043820          231 PSVVIRP-----GYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       231 ~g~~~~~-----~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                       +++...     ...+ +||||+. |+|.+++...
T Consensus       119 -~~~~~~~~~~~~~~~-lv~e~~~-~~L~~~~~~~  150 (458)
T 3rp9_A          119 -DIVIPKDVEKFDELY-VVLEIAD-SDFKKLFRTP  150 (458)
T ss_dssp             -EECCCSCTTTCCCEE-EEECCCS-EEHHHHHHSS
T ss_pred             -EEEecCCcccCceEE-EEEeccc-cchhhhcccC
Confidence             988543     3456 9999985 7898888653

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=98.93  E-value=8.5e-10  Score=98.66  Aligned_cols=89  Identities=16%  Similarity=0.183  Sum_probs=72.7

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCccceecc
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      .++|...+.||+|+||.||+             +... ++..||+|.+....... .. +.+|+.++..++|+||++++ 
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~-   75 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCS-------------ATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIF-   75 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEE-------------EEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEE-
T ss_pred             ccceEEeeEEcCCCCeEEEE-------------EEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCee-
Confidence            46788889999999999999             7754 58899999996543332 23 89999999999999999999 


Q ss_pred             ceEeeC-----CeEEEEEEecCCCCCccccccC
Q 043820          232 SVVIRP-----GYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       232 g~~~~~-----~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +++...     ...+ +||||++ |+|.+++..
T Consensus        76 ~~~~~~~~~~~~~~~-lv~e~~~-~~L~~~~~~  106 (353)
T 2b9h_A           76 NIQRPDSFENFNEVY-IIQELMQ-TDLHRVIST  106 (353)
T ss_dssp             EECCCSCSTTCCCEE-EEECCCS-EEHHHHHHH
T ss_pred             eeecccccCccceEE-EEEeccC-ccHHHHHhh
Confidence            987654     4556 9999998 689888754

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=98.92  E-value=6.6e-10  Score=101.07  Aligned_cols=88  Identities=17%  Similarity=0.212  Sum_probs=67.4

Q ss_pred             HHHhccCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccce
Q 043820          151 IANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPR  228 (282)
Q Consensus       151 l~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~  228 (282)
                      ++...++|...+.||+|+||.||+             +.. .++..||+|++...    .. ..+|+.+|..++|+|||+
T Consensus         2 l~~~~~~y~~~~~lG~G~fg~V~~-------------a~~~~~~~~vAiK~~~~~----~~~~~~E~~il~~l~hpnIv~   64 (383)
T 3eb0_A            2 LETSSKKYSLGKTLGTGSFGIVCE-------------VFDIESGKRFALKKVLQD----PRYKNRELDIMKVLDHVNIIK   64 (383)
T ss_dssp             ----CTTEEEEEEEECC-CEEEEE-------------EEETTTCCEEEEEEEECC----TTSCCHHHHHHTTCCCTTBCC
T ss_pred             CccccceEEEEEEEEeccCEEEEE-------------EEECCCCCEEEEEEEecC----cchHHHHHHHHHHcCCCCccc
Confidence            345677899999999999999999             764 46899999988643    22 568999999999999999


Q ss_pred             eccceEeeCC--------------------------------------eEEEEEEecCCCCCcccccc
Q 043820          229 SYPSVVIRPG--------------------------------------YKVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       229 l~~g~~~~~~--------------------------------------~~~~lv~Ey~~~GsL~~~l~  258 (282)
                      ++ +++....                                      ..+ +||||++ |+|.+.+.
T Consensus        65 l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lv~e~~~-~~L~~~l~  129 (383)
T 3eb0_A           65 LV-DYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLN-VIMEYVP-DTLHKVLK  129 (383)
T ss_dssp             EE-EEEEEC-------------------------------------CCEEE-EEECCCS-EEHHHHHH
T ss_pred             hh-heeeecCcccccccccccccccccccccccccccccccccCCCceEEE-EEEecCC-ccHHHHHH
Confidence            99 9875432                                      255 9999999 57777765

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=98.92  E-value=1.3e-09  Score=97.09  Aligned_cols=90  Identities=21%  Similarity=0.185  Sum_probs=72.2

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CC----cEEEEEEccCCCC-chhH-HHHHHHHhhhCCCCccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DA----RVVAARIVFAGSV-TGIF-FARSVTEVAKIYARSRPR  228 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~----~~vAvK~l~~~~~-~~~~-f~~e~~~l~~l~H~nlv~  228 (282)
                      ++|...+.||+|+||.||+             +... ++    ..||+|.+..... ...+ +.+|+.++..++||||++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~-------------~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~   81 (327)
T 3lzb_A           15 TEFKKIKVLGSGAFGTVYK-------------GLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR   81 (327)
T ss_dssp             TTEEEEEEEEECSSEEEEE-------------EEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCC
T ss_pred             hHceEEEEeeeCCCeEEEE-------------EEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeE
Confidence            5688889999999999999             6643 23    3468888865433 3334 999999999999999999


Q ss_pred             eccceEeeCCeEEEEEEecCCCCCccccccCCC
Q 043820          229 SYPSVVIRPGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       229 l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      ++ +++..+. .+ +++||+++|+|.+++....
T Consensus        82 ~~-~~~~~~~-~~-~v~~~~~~g~L~~~l~~~~  111 (327)
T 3lzb_A           82 LL-GICLTST-VQ-LITQLMPFGCLLDYVREHK  111 (327)
T ss_dssp             CC-EEEESSS-EE-EEECCCSSCBHHHHHHHTT
T ss_pred             EE-EEEecCC-ce-EEEEecCCCcHHHHHHhcC
Confidence            99 9987655 56 8999999999999987543

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=98.92  E-value=1.1e-09  Score=95.94  Aligned_cols=88  Identities=13%  Similarity=0.112  Sum_probs=69.6

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC----CchhH-HHHHHHHhhhCCCCcccee
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS----VTGIF-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~----~~~~~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      ++|...+.||+|+||.||+             +... ++..||+|.+....    ....+ +.+|+.++..++|+||+++
T Consensus         5 ~~y~i~~~lg~G~~g~V~~-------------~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~   71 (305)
T 2wtk_C            5 GKYLMGDLLGEGSYGKVKE-------------VLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQL   71 (305)
T ss_dssp             CCBCCCCEEEECSSCEEEE-------------EEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             cceeEeeEEecCCCeEEEE-------------EEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEE
Confidence            5688889999999999999             7654 57899999986432    22334 9999999999999999999


Q ss_pred             ccceEee--CCeEEEEEEecCCCCCccccccC
Q 043820          230 YPSVVIR--PGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       230 ~~g~~~~--~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      + +++..  ....+ +||||+++| |.+++..
T Consensus        72 ~-~~~~~~~~~~~~-lv~e~~~~~-l~~~~~~  100 (305)
T 2wtk_C           72 V-DVLYNEEKQKMY-MVMEYCVCG-MQEMLDS  100 (305)
T ss_dssp             E-EEEECC---CEE-EEEECCSEE-HHHHHHH
T ss_pred             E-EEEEcCCCCeEE-EEehhccCC-HHHHHHh
Confidence            9 98843  34556 999999987 6666543

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=98.91  E-value=4.3e-10  Score=99.11  Aligned_cols=101  Identities=16%  Similarity=0.205  Sum_probs=80.6

Q ss_pred             CccCHHHHHHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCch--hH-HHHHHHHhhh
Q 043820          144 PLFELATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTG--IF-FARSVTEVAK  220 (282)
Q Consensus       144 ~~~~~~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~  220 (282)
                      +.+.++.+....+.|...+.||+|+||.||+             +...++..||+|.+.......  .+ +.+|+.++.+
T Consensus        16 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~-------------~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~   82 (313)
T 3cek_A           16 ENLYFQSMSVKGRIYSILKQIGSGGSSKVFQ-------------VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK   82 (313)
T ss_dssp             ----CCEEEETTEEEEEEEEEECCSSEEEEE-------------EECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCeeeeeeccceEEEEEEecCCCCEEEEE-------------EEcCCCcEEEEEEeccccccccchHHHHHHHHHHHh
Confidence            3455555566667788899999999999999             877778999999986543332  23 9999999999


Q ss_pred             CC--CCccceeccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          221 IY--ARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       221 l~--H~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ++  |+||++++ +++...+..+ +||| +.+|+|.+++...
T Consensus        83 l~~~~~~iv~~~-~~~~~~~~~~-lv~e-~~~~~L~~~l~~~  121 (313)
T 3cek_A           83 LQQHSDKIIRLY-DYEITDQYIY-MVME-CGNIDLNSWLKKK  121 (313)
T ss_dssp             HGGGCTTBCCEE-EEEECSSEEE-EEEC-CCSEEHHHHHHHC
T ss_pred             ccccCCceEEEE-EEeecCCEEE-EEEe-cCCCcHHHHHHhc
Confidence            97  59999999 9999888888 9999 6788999998653

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=98.91  E-value=5.2e-10  Score=98.85  Aligned_cols=92  Identities=21%  Similarity=0.232  Sum_probs=71.5

Q ss_pred             HhccCccccceecccCccceeccccccccccccceeec--CCCcEEEEEEccCCCCc--hhH-HHHHHHHhhhC---CCC
Q 043820          153 NATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR--IDARVVAARIVFAGSVT--GIF-FARSVTEVAKI---YAR  224 (282)
Q Consensus       153 ~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~--~~~~~vAvK~l~~~~~~--~~~-f~~e~~~l~~l---~H~  224 (282)
                      .+.++|...+.||+|+||.||+             +..  .++..||+|.+......  ... +.+|+.++..+   +||
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~   74 (326)
T 1blx_A            8 RADQQYECVAEIGEGAYGKVFK-------------ARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHP   74 (326)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEE-------------EEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCT
T ss_pred             CchhceeeeeeecccccEEEEE-------------EEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCC
Confidence            4567889999999999999999             765  35789999998643222  122 77888777666   899


Q ss_pred             ccceeccceEe-----eCCeEEEEEEecCCCCCccccccCC
Q 043820          225 SRPRSYPSVVI-----RPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       225 nlv~l~~g~~~-----~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ||++++ +++.     .....+ +||||++ |+|.+++...
T Consensus        75 ~i~~~~-~~~~~~~~~~~~~~~-lv~e~~~-~~L~~~l~~~  112 (326)
T 1blx_A           75 NVVRLF-DVCTVSRTDRETKLT-LVFEHVD-QDLTTYLDKV  112 (326)
T ss_dssp             TBCCEE-EEEEEEECSSEEEEE-EEEECCS-CBHHHHHHHS
T ss_pred             CeEeee-eeeeecccCCCceEE-EEEecCC-CCHHHHHHhc
Confidence            999999 9887     334455 9999999 6999988653

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=98.91  E-value=1.5e-09  Score=97.20  Aligned_cols=89  Identities=16%  Similarity=0.194  Sum_probs=71.4

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch--hH-HHHHHHHhhhCCCCccceecc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG--IF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      ++|...+.||+|+||.||+             +... ++..||+|.+.......  .. +.+|+.++..++|+||++++ 
T Consensus        17 ~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~-   82 (351)
T 3mi9_A           17 SKYEKLAKIGQGTFGEVFK-------------ARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI-   82 (351)
T ss_dssp             GGEEEEEECSSCSTTSEEE-------------EEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEE-
T ss_pred             cceeEEEEEecCCCcEEEE-------------EEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHh-
Confidence            5688889999999999999             7753 68899999986543222  23 89999999999999999999 


Q ss_pred             ceEeeC--------CeEEEEEEecCCCCCccccccCC
Q 043820          232 SVVIRP--------GYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       232 g~~~~~--------~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +++...        +..+ +||||+++ +|.+.+...
T Consensus        83 ~~~~~~~~~~~~~~~~~~-lv~e~~~~-~l~~~l~~~  117 (351)
T 3mi9_A           83 EICRTKASPYNRCKGSIY-LVFDFCEH-DLAGLLSNV  117 (351)
T ss_dssp             EEEEEC--------CEEE-EEEECCSE-EHHHHHHCT
T ss_pred             heeeccccccccCCceEE-EEEeccCC-CHHHHHhhc
Confidence            988774        3456 99999995 777776543

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=98.91  E-value=1.4e-09  Score=99.01  Aligned_cols=89  Identities=17%  Similarity=0.229  Sum_probs=64.1

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc--hhH-HHHHHHHhhhCC-CCcccee
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT--GIF-FARSVTEVAKIY-ARSRPRS  229 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~--~~~-f~~e~~~l~~l~-H~nlv~l  229 (282)
                      .++|...+.||+|+||.||+             +... .+..||+|.+......  ... +.+|+.++..+. |+||+++
T Consensus         8 ~~~y~~~~~lG~G~~g~V~~-------------~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l   74 (388)
T 3oz6_A            8 LRKYELVKKLGKGAYGIVWK-------------SIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNL   74 (388)
T ss_dssp             HTTEEEEEC-------CEEE-------------EEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCE
T ss_pred             cCceEEEEEeeeCCCeEEEE-------------EEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCee
Confidence            45788889999999999999             7643 5889999998643222  233 889999999997 9999999


Q ss_pred             ccceEeeCC--eEEEEEEecCCCCCccccccC
Q 043820          230 YPSVVIRPG--YKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       230 ~~g~~~~~~--~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      + +++...+  ..+ +|||||+ |+|.+++..
T Consensus        75 ~-~~~~~~~~~~~~-lv~e~~~-~~L~~~~~~  103 (388)
T 3oz6_A           75 L-NVLRADNDRDVY-LVFDYME-TDLHAVIRA  103 (388)
T ss_dssp             E-EEEECTTSSCEE-EEEECCS-EEHHHHHHH
T ss_pred             e-eEEecCCCCEEE-EEecccC-cCHHHHHHc
Confidence            9 9887544  456 9999998 688888754

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=98.90  E-value=9.1e-10  Score=95.61  Aligned_cols=88  Identities=25%  Similarity=0.353  Sum_probs=64.4

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC--CC--cEEEEEEccCCCC---chhH-HHHHHHHhhhCCCCccc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI--DA--RVVAARIVFAGSV---TGIF-FARSVTEVAKIYARSRP  227 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~--~~--~~vAvK~l~~~~~---~~~~-f~~e~~~l~~l~H~nlv  227 (282)
                      ++|...+.||+|+||.||+             +...  ++  ..||+|.+.....   ...+ |.+|+.++..++|+||+
T Consensus        18 ~~y~~~~~lg~G~~g~Vy~-------------~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~   84 (291)
T 1u46_A           18 KDLRLLEKLGDGSFGVVRR-------------GEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI   84 (291)
T ss_dssp             GGEEEEEECC----CCCEE-------------EEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             hHeeeeeeecCCCceeEEE-------------EEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcc
Confidence            4678889999999999999             7642  22  3689999875422   2234 99999999999999999


Q ss_pred             eeccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          228 RSYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       228 ~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +++ +++..+. .+ +|+||+++|+|.+++..
T Consensus        85 ~~~-~~~~~~~-~~-~v~e~~~~~~L~~~l~~  113 (291)
T 1u46_A           85 RLY-GVVLTPP-MK-MVTELAPLGSLLDRLRK  113 (291)
T ss_dssp             CEE-EEECSSS-CE-EEEECCTTCBHHHHHHH
T ss_pred             cEE-EEEccCC-ce-eeEecccCCCHHHHHHh
Confidence            999 9887655 56 99999999999999864

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=98.90  E-value=6e-10  Score=98.96  Aligned_cols=89  Identities=22%  Similarity=0.239  Sum_probs=66.1

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhHHHHHHHH--hhhCCCCccceeccc
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIFFARSVTE--VAKIYARSRPRSYPS  232 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~f~~e~~~--l~~l~H~nlv~l~~g  232 (282)
                      .++|...+.||+|+||.||+             +.. ++..||+|.+....  ...+..|..+  +..++|+||++++ +
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~-------------~~~-~~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~-~   74 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYK-------------GSL-DERPVAVKVFSFAN--RQNFINEKNIYRVPLMEHDNIARFI-V   74 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEE-------------EEE-TTEEEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEE-E
T ss_pred             hHHhheeeecccCCCeEEEE-------------EEE-CCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCcchhhhe-e
Confidence            45688889999999999999             765 67899999986321  1125444444  5568999999999 7


Q ss_pred             eEee----CCeEEEEEEecCCCCCccccccCC
Q 043820          233 VVIR----PGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       233 ~~~~----~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      .+..    +...+++||||+++|+|.+++...
T Consensus        75 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~  106 (336)
T 3g2f_A           75 GDERVTADGRMEYLLVMEYYPNGSLXKYLSLH  106 (336)
T ss_dssp             EEEEECTTSCEEEEEEECCCTTCBHHHHHHHC
T ss_pred             cccccccCCCceEEEEEecCCCCcHHHHHhhc
Confidence            5432    222334999999999999998543

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=98.90  E-value=1.8e-09  Score=97.86  Aligned_cols=88  Identities=13%  Similarity=0.018  Sum_probs=70.8

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch--hH-HHHHHHHhhhCCCCccceec
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG--IF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      .++|...+.||+|+||.||+             +... .+..||+|.+.......  .+ +.+|+.++..++||||++++
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~-------------~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~   90 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCA-------------AYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL   90 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEE-------------EEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             hhheeEeeeeEecCCEEEEE-------------EEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceE
Confidence            35788889999999999999             7644 57899999987533222  23 89999999999999999999


Q ss_pred             cceEeeCC------eEEEEEEecCCCCCcccccc
Q 043820          231 PSVVIRPG------YKVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       231 ~g~~~~~~------~~~~lv~Ey~~~GsL~~~l~  258 (282)
                       +++....      ..+ +||||+++ +|.+++.
T Consensus        91 -~~~~~~~~~~~~~~~~-lv~e~~~~-~l~~~~~  121 (371)
T 2xrw_A           91 -NVFTPQKSLEEFQDVY-IVMELMDA-NLCQVIQ  121 (371)
T ss_dssp             -EEECSCCSTTTCCEEE-EEEECCSE-EHHHHHH
T ss_pred             -EeeccccccccccceE-EEEEcCCC-CHHHHHh
Confidence             9887654      456 99999985 6777764

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=98.90  E-value=2.1e-09  Score=97.48  Aligned_cols=89  Identities=13%  Similarity=0.069  Sum_probs=64.6

Q ss_pred             ccCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCc--hhH-HHHHHHHhhhCCCCccceec
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVT--GIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~--~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      .++|...+.||+|+||.||+             +.. .++..||+|.+......  ..+ +.+|+.++..++|+||++++
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~-------------a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~   94 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCA-------------AFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL   94 (367)
T ss_dssp             ETTEEEEEECC----CCEEE-------------EEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCS
T ss_pred             CCceEEeeEEeecCCeEEEE-------------EEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEE
Confidence            36788889999999999999             764 46889999999654322  233 89999999999999999999


Q ss_pred             cceEeeC------CeEEEEEEecCCCCCccccccC
Q 043820          231 PSVVIRP------GYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       231 ~g~~~~~------~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                       +++...      ...+ +++||+ +++|.+++..
T Consensus        95 -~~~~~~~~~~~~~~~~-lv~e~~-~~~L~~~~~~  126 (367)
T 2fst_X           95 -DVFTPARSLEEFNDVY-LVTHLM-GADLNNIVKC  126 (367)
T ss_dssp             -EEECSCSSGGGCCCCE-EEEECC-CEECC-----
T ss_pred             -EEEecCCccccCCeEE-EEeccc-CCCHHHHHhc
Confidence             988654      4456 999999 6899998864

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=98.90  E-value=2e-09  Score=96.50  Aligned_cols=88  Identities=11%  Similarity=0.075  Sum_probs=71.5

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch--hH-HHHHHHHhhhCCCCccceec
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG--IF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      .++|...+.||+|+||.||+             +... +|..||+|.+.......  .+ +.+|+.++..++|+||++++
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~   89 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCS-------------AIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL   89 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEE-------------EEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCS
T ss_pred             CceEEEeeeEecCCCeEEEE-------------EEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHh
Confidence            35677889999999999999             7654 58899999987543322  23 89999999999999999999


Q ss_pred             cceEeeCCe------EEEEEEecCCCCCcccccc
Q 043820          231 PSVVIRPGY------KVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       231 ~g~~~~~~~------~~~lv~Ey~~~GsL~~~l~  258 (282)
                       +++.....      .+ +||||++ |+|.+++.
T Consensus        90 -~~~~~~~~~~~~~~~~-lv~e~~~-~~l~~~~~  120 (353)
T 3coi_A           90 -DVFTPASSLRNFYDFY-LVMPFMQ-TDLQKIMG  120 (353)
T ss_dssp             -EEECSCSSGGGCCCCE-EEEECCS-EEGGGTTT
T ss_pred             -heEecccccccceeEE-EEecccc-CCHHHHhc
Confidence             98876654      36 9999998 68888774

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=98.89  E-value=3.3e-10  Score=102.82  Aligned_cols=90  Identities=8%  Similarity=0.020  Sum_probs=68.6

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCC---CCchhH-HHHHH---HHhhhCCCCc
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAG---SVTGIF-FARSV---TEVAKIYARS  225 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~---~~~~~~-f~~e~---~~l~~l~H~n  225 (282)
                      ..++|...+.||+|+||.||+             +... ++..||||.+...   .....+ |.+|+   ..+..++|||
T Consensus        71 ~~~~y~~~~~lG~G~~g~V~~-------------a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpn  137 (377)
T 3byv_A           71 RPRTLVRGTVLGQEDPYAYLE-------------ATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQK  137 (377)
T ss_dssp             CCEEEEEEEEEEEETTEEEEE-------------EEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHH
T ss_pred             CCceEEEcceeecCCCEEEEE-------------EEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHH
Confidence            346677889999999999999             8753 5899999998743   222334 99999   5666778999


Q ss_pred             cceeccceEeeCC------------------------eEEEEEEecCCCCCccccccC
Q 043820          226 RPRSYPSVVIRPG------------------------YKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       226 lv~l~~g~~~~~~------------------------~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ||+++ +.+....                        ..+ ++|||+ +|+|.+++..
T Consensus       138 iv~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-lv~E~~-~g~L~~~l~~  192 (377)
T 3byv_A          138 QAKVH-LRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRF-FLYPRM-QSNLQTFGEV  192 (377)
T ss_dssp             HHHHH-HCBCCCSEEEECTTSCSEEEC------CEEESEE-EEEECC-SEEHHHHHHH
T ss_pred             HHHHH-hhhhhhhhhhhccCCccccccccCCCceEEEEEE-EEEecc-CCCHHHHHHh
Confidence            99998 7554211                        256 999999 6899999864

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=98.89  E-value=1.7e-09  Score=97.95  Aligned_cols=88  Identities=11%  Similarity=0.080  Sum_probs=72.2

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch--hH-HHHHHHHhhhCCCCccceec
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG--IF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      .++|...+.||+|+||.||+             +... ++..||+|.+.......  .+ +.+|+.++..++|+||++++
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~  107 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCS-------------AIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL  107 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEE-------------EEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCS
T ss_pred             cccEEEEeEEecCCCeEEEE-------------EEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhh
Confidence            35678889999999999999             7644 58899999997543332  23 99999999999999999999


Q ss_pred             cceEeeCCeE------EEEEEecCCCCCcccccc
Q 043820          231 PSVVIRPGYK------VGLILELKPDPDPNPDRL  258 (282)
Q Consensus       231 ~g~~~~~~~~------~~lv~Ey~~~GsL~~~l~  258 (282)
                       +++...+..      + +||||++ |+|.+++.
T Consensus       108 -~~~~~~~~~~~~~~~~-lv~e~~~-~~l~~~~~  138 (371)
T 4exu_A          108 -DVFTPASSLRNFYDFY-LVMPFMQ-TDLQKIMG  138 (371)
T ss_dssp             -EEECSCSSSTTCCCCE-EEEECCC-EEHHHHTT
T ss_pred             -hheeccCCcccceeEE-EEEcccc-ccHHHHhh
Confidence             998776654      7 9999998 68887763

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=98.89  E-value=1.9e-09  Score=95.59  Aligned_cols=88  Identities=13%  Similarity=0.129  Sum_probs=69.8

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchh-H-HHHHHH-HhhhCCCCccceec
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGI-F-FARSVT-EVAKIYARSRPRSY  230 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~-~-f~~e~~-~l~~l~H~nlv~l~  230 (282)
                      .++|...+.||+|+||.||+             +... ++..||+|.+........ . +..|+. ++..++|+||++++
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~   87 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNK-------------MVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFY   87 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEE-------------EEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEE
T ss_pred             HHHhhehheeccCCCEEEEE-------------EEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeee
Confidence            35677789999999999999             7754 588999999975433322 2 666665 77788999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCcccccc
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~  258 (282)
                       |++...+..+ +||||+++ +|.+++.
T Consensus        88 -~~~~~~~~~~-lv~e~~~~-~l~~~~~  112 (327)
T 3aln_A           88 -GALFREGDCW-ICMELMST-SFDKFYK  112 (327)
T ss_dssp             -EEEECSSEEE-EEECCCSE-EHHHHHH
T ss_pred             -eEEEeCCceE-EEEeecCC-ChHHHHH
Confidence             9999888888 99999995 7777664

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=98.89  E-value=1.8e-09  Score=97.36  Aligned_cols=89  Identities=12%  Similarity=0.076  Sum_probs=72.5

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchh-H-HHHHHHHhhhCCCCccceecc
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGI-F-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~-~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      .+.|...+.||+|+||.||+             +... ++..||+|.+........ + +.+|+.++.+++|+||++++ 
T Consensus        26 ~~~y~~~~~lG~G~~g~V~~-------------~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~-   91 (364)
T 3qyz_A           26 GPRYTNLSYIGEGAYGMVCS-------------AYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN-   91 (364)
T ss_dssp             TTTEEEEEEEEECSSEEEEE-------------EEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCC-
T ss_pred             cccEEEEEEeecCCCeEEEE-------------EEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccce-
Confidence            45788889999999999999             7644 578999999975443333 3 99999999999999999999 


Q ss_pred             ceEeeCC-----eEEEEEEecCCCCCccccccC
Q 043820          232 SVVIRPG-----YKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       232 g~~~~~~-----~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +++....     ..+ +||||++ |+|.+++..
T Consensus        92 ~~~~~~~~~~~~~~~-iv~e~~~-~~L~~~l~~  122 (364)
T 3qyz_A           92 DIIRAPTIEQMKDVY-IVQDLME-TDLYKLLKT  122 (364)
T ss_dssp             EEECCSSTTTCCCEE-EEEECCS-EEHHHHHHH
T ss_pred             eEEecCCccccceEE-EEEcccC-cCHHHHHHh
Confidence            9886543     456 9999998 589888754

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=98.87  E-value=2.9e-09  Score=95.43  Aligned_cols=88  Identities=19%  Similarity=0.207  Sum_probs=60.6

Q ss_pred             HHHHHhccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhHHHHHHHHhhhCCCCccc
Q 043820          149 ATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRP  227 (282)
Q Consensus       149 ~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~nlv  227 (282)
                      .+.....++|...+.||+|+||.||+             +... ++..||+|.+.........+.+++..+..++|+||+
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv   82 (360)
T 3e3p_A           16 ERSRKEMDRFQVERMAGQGTFGTVQL-------------GKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIV   82 (360)
T ss_dssp             HHHHHHHTTEEEC----------CEE-------------EEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBC
T ss_pred             hhchhhccceEEEEEEecCCCeEEEE-------------EEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcc
Confidence            44566778899999999999999999             7754 588999998865433333388888889999999999


Q ss_pred             eeccceEeeCCe-------EEEEEEecCCCC
Q 043820          228 RSYPSVVIRPGY-------KVGLILELKPDP  251 (282)
Q Consensus       228 ~l~~g~~~~~~~-------~~~lv~Ey~~~G  251 (282)
                      +++ +++.....       .+ +||||++++
T Consensus        83 ~~~-~~~~~~~~~~~~~~~~~-lv~e~~~~~  111 (360)
T 3e3p_A           83 QLQ-SYFYTLGERDRRDIYLN-VVMEYVPDT  111 (360)
T ss_dssp             CEE-EEEEEECSSCTTCEEEE-EEEECCSCB
T ss_pred             cHH-HhhhccccccccceeEE-EEeeccccc
Confidence            999 98865433       55 999999975

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=98.87  E-value=1.1e-09  Score=101.45  Aligned_cols=84  Identities=15%  Similarity=0.055  Sum_probs=68.9

Q ss_pred             cccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH-HHHHHHHhhhC-CCCccceeccceEee
Q 043820          159 SINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF-FARSVTEVAKI-YARSRPRSYPSVVIR  236 (282)
Q Consensus       159 ~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l-~H~nlv~l~~g~~~~  236 (282)
                      ...+.||+|+||+||.             ....+|..||||++...   ..+ +.+|+.++.++ +|||||+++ +.+..
T Consensus        18 ~~~~~LG~G~~g~V~~-------------~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~-~~~~~   80 (434)
T 2rio_A           18 VSEKILGYGSSGTVVF-------------QGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYY-CSETT   80 (434)
T ss_dssp             EEEEEEEECSTTCEEE-------------EEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEE-EEEEC
T ss_pred             eccCeEeeCCCeEEEE-------------EEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEE-EEEec
Confidence            3457899999999987             44457899999998542   234 88999999876 899999999 99988


Q ss_pred             CCeEEEEEEecCCCCCccccccCCC
Q 043820          237 PGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       237 ~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      ....+ +||||++ |+|.+++....
T Consensus        81 ~~~~~-lv~E~~~-gsL~~~l~~~~  103 (434)
T 2rio_A           81 DRFLY-IALELCN-LNLQDLVESKN  103 (434)
T ss_dssp             SSEEE-EEECCCS-EEHHHHHHTC-
T ss_pred             CCeEE-EEEecCC-CCHHHHHhccC
Confidence            88888 9999996 69999997643

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=98.87  E-value=1.5e-09  Score=106.17  Aligned_cols=91  Identities=15%  Similarity=0.067  Sum_probs=74.6

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhC-CCCccc
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKI-YARSRP  227 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l-~H~nlv  227 (282)
                      ..++|...+.||+|+||.||+             +... .+..||+|.+....   ....+ +..|..++..+ +|++|+
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~-------------~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~  405 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVML-------------SERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLT  405 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEE-------------EEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBC
T ss_pred             cccceEEEEEEccCCCEEEEE-------------EEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEE
Confidence            346788889999999999999             7654 57899999986431   22234 88999999887 799999


Q ss_pred             eeccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          228 RSYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       228 ~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ++. +++.+.+..+ |||||+++|+|.++|..
T Consensus       406 ~l~-~~~~~~~~~~-lV~E~~~gg~L~~~l~~  435 (674)
T 3pfq_A          406 QLH-SCFQTMDRLY-FVMEYVNGGDLMYHIQQ  435 (674)
T ss_dssp             CEE-EECBCSSEEE-EEEECCCSCBHHHHHHH
T ss_pred             EEE-EEEEeCCEEE-EEEeCcCCCcHHHHHHh
Confidence            999 8887777777 99999999999999864

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=98.86  E-value=1.7e-09  Score=100.33  Aligned_cols=89  Identities=16%  Similarity=0.157  Sum_probs=72.9

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH-HHHHHHHhhhC-CCCccceecc
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF-FARSVTEVAKI-YARSRPRSYP  231 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l-~H~nlv~l~~  231 (282)
                      ...+|...+.||+|+||.|+.             ....++..||||++...   ... +.+|+.+|..+ +|||||+++ 
T Consensus        22 ~~~~y~~~~~LG~G~~G~V~~-------------~~~~~~~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~l~-   84 (432)
T 3p23_A           22 GKISFCPKDVLGHGAEGTIVY-------------RGMFDNRDVAVKRILPE---CFSFADREVQLLRESDEHPNVIRYF-   84 (432)
T ss_dssp             TTEEEEEEEEEEECGGGCEEE-------------EEESSSSEEEEEEECTT---TEEECHHHHHHHHHSCCCTTBCCEE-
T ss_pred             ccEEEecCCeeecCcCEEEEE-------------EEEeCCeEEEEEEECHH---HHHHHHHHHHHHHhccCCCCcCeEE-
Confidence            445688889999999999765             44457899999998642   223 78999999999 899999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccCCC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      +.+......+ +||||++ |+|.+++....
T Consensus        85 ~~~~~~~~~~-lv~E~~~-g~L~~~l~~~~  112 (432)
T 3p23_A           85 CTEKDRQFQY-IAIELCA-ATLQEYVEQKD  112 (432)
T ss_dssp             EEEEETTEEE-EEEECCS-EEHHHHHHSSS
T ss_pred             EEEecCCEEE-EEEECCC-CCHHHHHHhcC
Confidence            9999888888 9999997 69999987544

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=98.85  E-value=2.1e-09  Score=98.55  Aligned_cols=96  Identities=13%  Similarity=0.034  Sum_probs=70.5

Q ss_pred             cCcccc-ceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhHHHHHHHHhh-hCCCCccceeccc
Q 043820          156 DNFSIN-NKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIFFARSVTEVA-KIYARSRPRSYPS  232 (282)
Q Consensus       156 ~~f~~~-~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~f~~e~~~l~-~l~H~nlv~l~~g  232 (282)
                      ++|... +.||+|+||.||+             +... ++..||+|.+...    ..+.+|+.++. ..+|+||++++ +
T Consensus        61 ~~y~~~~~~LG~G~~g~V~~-------------~~~~~~~~~vAiK~~~~~----~~~~~E~~~~~~~~~hp~iv~l~-~  122 (400)
T 1nxk_A           61 DDYKVTSQVLGLGINGKVLQ-------------IFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHIVRIV-D  122 (400)
T ss_dssp             GTEEEEEEEEEEETTEEEEE-------------EEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTBCCEE-E
T ss_pred             ccceeccceeeeccCeEEEE-------------EEECCCCCEEEEEEeCcc----hhHHHHHHHHHHhcCCCCcceEe-E
Confidence            345444 6899999999999             7654 5889999998531    22788888864 45899999999 9


Q ss_pred             eEee----CCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          233 VVIR----PGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       233 ~~~~----~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      ++..    ....+ |||||+++|+|.++|.... ...++|...
T Consensus       123 ~~~~~~~~~~~~~-lv~E~~~gg~L~~~l~~~~-~~~l~~~~~  163 (400)
T 1nxk_A          123 VYENLYAGRKCLL-IVMECLDGGELFSRIQDRG-DQAFTEREA  163 (400)
T ss_dssp             EEEEEETTEEEEE-EEEECCCSEEHHHHHHCC----CCBHHHH
T ss_pred             EEeecccCCcEEE-EEEEeCCCCcHHHHHHHhC-CCCCCHHHH
Confidence            8764    34455 9999999999999997643 223555443

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=98.85  E-value=9.4e-10  Score=96.77  Aligned_cols=93  Identities=23%  Similarity=0.245  Sum_probs=68.9

Q ss_pred             HHhccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc------hhH-HHHHHHHhhhC--
Q 043820          152 ANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT------GIF-FARSVTEVAKI--  221 (282)
Q Consensus       152 ~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~------~~~-f~~e~~~l~~l--  221 (282)
                      ..-.++|...+.||+|+||.||+             +... ++..||+|.+......      ... +.+|+.++.++  
T Consensus        27 ~~~~~~y~~~~~lg~G~~g~Vy~-------------~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~   93 (312)
T 2iwi_A           27 EAFEAEYRLGPLLGKGGFGTVFA-------------GHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGA   93 (312)
T ss_dssp             ------CEEEEEEEEETTEEEEE-------------EECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHS
T ss_pred             hhhhhceEEeeEEEcCCCEEEEE-------------EEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcc
Confidence            34456789999999999999999             7653 5889999999754322      122 77899999988  


Q ss_pred             --CCCccceeccceEeeCCeEEEEEEec-CCCCCccccccC
Q 043820          222 --YARSRPRSYPSVVIRPGYKVGLILEL-KPDPDPNPDRLH  259 (282)
Q Consensus       222 --~H~nlv~l~~g~~~~~~~~~~lv~Ey-~~~GsL~~~l~~  259 (282)
                        +|+||++++ +++...+..+ +|+|| +++++|.+++..
T Consensus        94 ~~~h~~i~~~~-~~~~~~~~~~-~v~e~~~~~~~L~~~l~~  132 (312)
T 2iwi_A           94 GGGHPGVIRLL-DWFETQEGFM-LVLERPLPAQDLFDYITE  132 (312)
T ss_dssp             SCCCSSBCCEE-EEC-----CE-EEEECCSSEEEHHHHHHH
T ss_pred             cCCCCCeeeEE-EEEecCCeEE-EEEEecCCCCCHHHHHHh
Confidence              899999999 9988888888 99999 899999999864

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=98.85  E-value=4.5e-09  Score=92.28  Aligned_cols=101  Identities=19%  Similarity=0.158  Sum_probs=72.9

Q ss_pred             hccCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCC-----chhH-HHHHHHHhhhCC---C
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSV-----TGIF-FARSVTEVAKIY---A  223 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~-----~~~~-f~~e~~~l~~l~---H  223 (282)
                      .+++|...+.||+|+||.||+             +.. .++..||+|.+.....     .... +.+|+.++..++   |
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h   73 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYK-------------ARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEH   73 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEE-------------EECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCC
T ss_pred             cccceEEEEEEecCCCeEEEE-------------EEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCC
Confidence            356788899999999999999             774 3588999999863221     1122 777887776664   9


Q ss_pred             CccceeccceEeeCC-----eEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          224 RSRPRSYPSVVIRPG-----YKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       224 ~nlv~l~~g~~~~~~-----~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      +||++++ +++....     ..+ ++|||++ |+|.+++..... ..+++...
T Consensus        74 ~niv~~~-~~~~~~~~~~~~~~~-lv~e~~~-~~L~~~~~~~~~-~~~~~~~~  122 (308)
T 3g33_A           74 PNVVRLM-DVCATSRTDREIKVT-LVFEHVD-QDLRTYLDKAPP-PGLPAETI  122 (308)
T ss_dssp             TTBCCEE-EEEEECCSSSEEEEE-EEEECCC-CBHHHHHHTCCT-TCSCHHHH
T ss_pred             CCeEEee-eeeeccCCCCceeEE-EEehhhh-cCHHHHHhhccC-CCCCHHHH
Confidence            9999999 9987755     345 9999998 599999876442 22555433

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=98.85  E-value=2.4e-09  Score=100.12  Aligned_cols=87  Identities=14%  Similarity=0.017  Sum_probs=69.0

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc--hhH-HHHHHHHhhhCCCCccceec
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT--GIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~--~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      .++|...+.||+|+||.||+             +... .+..||+|++......  ..+ +.+|+.+|..++|+|||+++
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~-------------a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~  127 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCA-------------AYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL  127 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEE-------------EEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCS
T ss_pred             cCCeEEEEEeecCCCeEEEE-------------EEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEE
Confidence            46788889999999999999             7643 5889999999754222  233 89999999999999999999


Q ss_pred             cceEeeCC------eEEEEEEecCCCCCccccc
Q 043820          231 PSVVIRPG------YKVGLILELKPDPDPNPDR  257 (282)
Q Consensus       231 ~g~~~~~~------~~~~lv~Ey~~~GsL~~~l  257 (282)
                       +++....      ..+ +||||++++ |.+.+
T Consensus       128 -~~~~~~~~~~~~~~~~-lv~E~~~~~-l~~~~  157 (464)
T 3ttj_A          128 -NVFTPQKTLEEFQDVY-LVMELMDAN-LCQVI  157 (464)
T ss_dssp             -EEECSCCSTTTCCEEE-EEEECCSEE-HHHHH
T ss_pred             -EEEccCCccccCCeEE-EEEeCCCCC-HHHHH
Confidence             9886543      346 999999875 55554

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=98.85  E-value=4.2e-09  Score=91.67  Aligned_cols=96  Identities=16%  Similarity=0.251  Sum_probs=78.0

Q ss_pred             cCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCchhH-HHHHHHHhhhC-CCCccceeccc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVTGIF-FARSVTEVAKI-YARSRPRSYPS  232 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l-~H~nlv~l~~g  232 (282)
                      ++|...+.||+|+||.||+             +.. .++..||+|.+...  .... +.+|+..+..+ +|+|+++++ +
T Consensus        10 ~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vavK~~~~~--~~~~~~~~e~~~~~~l~~~~~i~~~~-~   73 (298)
T 1csn_A           10 VHYKVGRRIGEGSFGVIFE-------------GTNLLNNQQVAIKFEPRR--SDAPQLRDEYRTYKLLAGCTGIPNVY-Y   73 (298)
T ss_dssp             TTEEEEEEEEECSSCEEEE-------------EEETTTTEEEEEEEEECC--TTSCCHHHHHHHHHHTTTCTTCCCEE-E
T ss_pred             cceEEEEEEeecCCEEEEE-------------EEECCCCcEEEEEEeccC--CccHHHHHHHHHHHHHhcCCCCCeEE-e
Confidence            4688889999999999999             764 46899999998643  2233 99999999999 899999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      ++......+ +||||+ +|+|.+++....  ..+++...
T Consensus        74 ~~~~~~~~~-lv~e~~-~~~L~~~l~~~~--~~~~~~~~  108 (298)
T 1csn_A           74 FGQEGLHNV-LVIDLL-GPSLEDLLDLCG--RKFSVKTV  108 (298)
T ss_dssp             EEEETTEEE-EEEECC-CCBHHHHHHHTT--TCCCHHHH
T ss_pred             ecCCCceeE-EEEEec-CCCHHHHHHHhc--cCCCHHHH
Confidence            998888888 999999 999999997533  23454433

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=98.84  E-value=5.3e-10  Score=100.92  Aligned_cols=101  Identities=12%  Similarity=0.163  Sum_probs=73.5

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecCC------CcEEEEEEccCCCCch-----------hH-HHHHH
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARID------ARVVAARIVFAGSVTG-----------IF-FARSV  215 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~------~~~vAvK~l~~~~~~~-----------~~-f~~e~  215 (282)
                      ..++|...+.||+|+||.||+             +....      +..||+|.+.......           .. +..|+
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~-------------~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~   99 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYL-------------ADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKW   99 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEE-------------EEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHH
T ss_pred             CCCeEEEEEEEecCCCeEEEE-------------eeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHH
Confidence            456788889999999999999             65433      4789999986543211           01 44566


Q ss_pred             HHhhhCCCCccceeccceEeeC----CeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          216 TEVAKIYARSRPRSYPSVVIRP----GYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       216 ~~l~~l~H~nlv~l~~g~~~~~----~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      ..+..++|+||++++ |++...    ...+ |||||+ +|+|.+++....  ..++|..++
T Consensus       100 ~~~~~l~h~~iv~~~-~~~~~~~~~~~~~~-lv~e~~-g~~L~~~~~~~~--~~l~~~~~~  155 (364)
T 3op5_A          100 IRTRKLKYLGVPKYW-GSGLHDKNGKSYRF-MIMDRF-GSDLQKIYEANA--KRFSRKTVL  155 (364)
T ss_dssp             HHHTTCSCCCSCCEE-EEEEEEETTEEEEE-EEEECE-EEEHHHHHHHTT--SCCCHHHHH
T ss_pred             HHHhhccCCCCCeEE-eeeeeccCCcceEE-EEEeCC-CCCHHHHHHhcc--CCCCHHHHH
Confidence            677888999999999 988764    3355 999999 999999986532  346666554

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=98.84  E-value=3.4e-09  Score=92.82  Aligned_cols=86  Identities=14%  Similarity=0.043  Sum_probs=68.4

Q ss_pred             cCcccc-ceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhHHHHHHHHh-hhCCCCccceeccc
Q 043820          156 DNFSIN-NKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIFFARSVTEV-AKIYARSRPRSYPS  232 (282)
Q Consensus       156 ~~f~~~-~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~f~~e~~~l-~~l~H~nlv~l~~g  232 (282)
                      ++|... +.||+|+||.||+             +... ++..||+|.+...    ..+.+|+.++ ..++|+||++++ +
T Consensus        17 ~~y~~~~~~lg~G~~g~V~~-------------~~~~~~~~~vaiK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~-~   78 (299)
T 3m2w_A           17 DDYKVTSQVLGLGINGKVLQ-------------IFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHIVRIV-D   78 (299)
T ss_dssp             GTEEEEEEEEEEETTEEEEE-------------EEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTBCCEE-E
T ss_pred             cchhhcCcccccCCCeEEEE-------------EEEcCCCcEEEEEEeccc----HHHHHHHHHHHHhccCCCchhHH-h
Confidence            345554 6799999999999             7653 5889999998531    2278888887 566999999999 9


Q ss_pred             eEee----CCeEEEEEEecCCCCCccccccCC
Q 043820          233 VVIR----PGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       233 ~~~~----~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ++..    ....+ +||||+++|+|.+++...
T Consensus        79 ~~~~~~~~~~~~~-lv~e~~~~~~L~~~l~~~  109 (299)
T 3m2w_A           79 VYENLYAGRKCLL-IVMECLDGGELFSRIQDR  109 (299)
T ss_dssp             EEEEEETTEEEEE-EEECCCCSCBHHHHHHHC
T ss_pred             hhhhhcCCCceEE-EEEeecCCCcHHHHHHhc
Confidence            8866    44556 999999999999999754

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=98.84  E-value=1.1e-09  Score=98.36  Aligned_cols=96  Identities=8%  Similarity=0.023  Sum_probs=72.8

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC---------CCcEEEEEEccCCCCchhHHHHHHHHhhhCCCCcc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI---------DARVVAARIVFAGSVTGIFFARSVTEVAKIYARSR  226 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~---------~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~nl  226 (282)
                      ++|...+.||+|+||.||+             +...         ++..||+|.+...    ..+.+|+.++.+++|+||
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~-------------~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l~h~ni  104 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYE-------------AAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRAAKPLQ  104 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEE-------------EEECC-----------CEEEEEEETT----STHHHHHHHHHHHCCHHH
T ss_pred             CeEEEEEEecCCCCeEEEE-------------EeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHhcccch
Confidence            5688889999999999999             6544         3789999998643    129999999999999999


Q ss_pred             ce---------------eccceEee-CCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          227 PR---------------SYPSVVIR-PGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       227 v~---------------l~~g~~~~-~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      ++               ++ +++.. ....+ +||||+ +|+|.+++.... ...++|..++
T Consensus       105 v~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~-lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~  162 (352)
T 2jii_A          105 VNKWKKLYSTPLLAIPTCM-GFGVHQDKYRF-LVLPSL-GRSLQSALDVSP-KHVLSERSVL  162 (352)
T ss_dssp             HHHHHHHTTCTTCSCCCCC-EEEEETTTEEE-EEEECC-CEEHHHHHHHSG-GGCCCHHHHH
T ss_pred             hhhhhhhccCCccCccchh-hccccCCcEEE-EEecCC-CcCHHHHHHhCC-cCCCCHHHHH
Confidence            98               56 67666 55556 999999 999999997542 1345655443

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=98.81  E-value=1.8e-09  Score=96.73  Aligned_cols=97  Identities=13%  Similarity=0.229  Sum_probs=68.9

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC----CCcEEEEEEccCCCCc-----------hhH-HHHHHHHhh
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI----DARVVAARIVFAGSVT-----------GIF-FARSVTEVA  219 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~----~~~~vAvK~l~~~~~~-----------~~~-f~~e~~~l~  219 (282)
                      ++|...+.||+|+||.||+             +...    .+..+|+|.+......           ... +.+|+..+.
T Consensus        37 ~~y~~~~~lg~G~~g~Vy~-------------~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~  103 (345)
T 2v62_A           37 NQWVLGKKIGSGGFGLIYL-------------AFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERK  103 (345)
T ss_dssp             CEEEEEEEC------CEEE-------------EEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred             ceEEEEeeEeecCCeEEEE-------------EEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhc
Confidence            5688889999999999999             6653    4678999998754321           112 678888899


Q ss_pred             hCCCCccceeccceEee----CCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          220 KIYARSRPRSYPSVVIR----PGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       220 ~l~H~nlv~l~~g~~~~----~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      .++|+||++++ +++..    ....+ +||||+ +|+|.+++....   .++|..+
T Consensus       104 ~l~h~ni~~~~-~~~~~~~~~~~~~~-lv~e~~-~~~L~~~l~~~~---~~~~~~~  153 (345)
T 2v62_A          104 QLDYLGIPLFY-GSGLTEFKGRSYRF-MVMERL-GIDLQKISGQNG---TFKKSTV  153 (345)
T ss_dssp             TCSCCCCCCEE-EEEEEESSSCEEEE-EEEECE-EEEHHHHCBGGG---BCCHHHH
T ss_pred             cccccCcceee-cccccccCCCcEEE-EEEecc-CCCHHHHHHhcC---CCCHHHH
Confidence            99999999999 99887    55566 999999 999999986532   4555444

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=98.81  E-value=4.3e-09  Score=96.32  Aligned_cols=81  Identities=17%  Similarity=0.197  Sum_probs=59.7

Q ss_pred             cceecccCccceeccccccccccccceeecC---CCcEEEEEEccCCCCchhHHHHHHHHhhhCCCCccceeccceEee-
Q 043820          161 NNKLGEGGFGPVYKVVAAGICFAGTITGARI---DARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRPRSYPSVVIR-  236 (282)
Q Consensus       161 ~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~---~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~nlv~l~~g~~~~-  236 (282)
                      +++||+|+||.||+             +...   ++..||+|.+..... ...+.+|+.+|..++|||||+++ +++.. 
T Consensus        26 g~~lG~G~~g~Vy~-------------~~~~~~~~~~~vaiK~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~-~~~~~~   90 (405)
T 3rgf_A           26 GCKVGRGTYGHVYK-------------AKRKDGKDDKDYALKQIEGTGI-SMSACREIALLRELKHPNVISLQ-KVFLSH   90 (405)
T ss_dssp             SCCCC-----EEEE-------------EEESSSSCCCCEEEEECSSSSC-CHHHHHHHHHHHHCCCTTBCCCC-EEEEET
T ss_pred             CcEeeecCCeEEEE-------------EEEccCCCCeEEEEEEECCCCC-CHHHHHHHHHHHhcCCCCeeeEe-eEEecC
Confidence            36899999999999             7644   478899999964321 22289999999999999999999 99854 


Q ss_pred             -CCeEEEEEEecCCCCCcccccc
Q 043820          237 -PGYKVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       237 -~~~~~~lv~Ey~~~GsL~~~l~  258 (282)
                       ....+ +||||+++ +|.+++.
T Consensus        91 ~~~~~~-lv~e~~~~-~l~~~~~  111 (405)
T 3rgf_A           91 ADRKVW-LLFDYAEH-DLWHIIK  111 (405)
T ss_dssp             TTTEEE-EEEECCSE-EHHHHHH
T ss_pred             CCCeEE-EEEeCCCC-CHHHHHH
Confidence             55566 99999984 7777664

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=98.78  E-value=4.5e-09  Score=93.87  Aligned_cols=97  Identities=12%  Similarity=0.093  Sum_probs=69.6

Q ss_pred             ccCcccc-ceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhHHHHHH-HHhhhCCCCccceecc
Q 043820          155 TDNFSIN-NKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIFFARSV-TEVAKIYARSRPRSYP  231 (282)
Q Consensus       155 t~~f~~~-~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~f~~e~-~~l~~l~H~nlv~l~~  231 (282)
                      .++|... +.||+|+||.||+             +... ++..||+|.+...    ....+|+ ..+..+.|+||++++ 
T Consensus        27 ~~~y~i~~~~lG~G~~g~V~~-------------~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~-   88 (336)
T 3fhr_A           27 TDDYQLSKQVLGLGVNGKVLE-------------CFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCIL-   88 (336)
T ss_dssp             GGTEEEEEEEEEEETTEEEEE-------------EEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEE-
T ss_pred             cceeEecceeeeeCCCeEEEE-------------EEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHH-
Confidence            4567764 4699999999999             7755 5899999998642    1222333 345677999999999 


Q ss_pred             ceEee----CCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          232 SVVIR----PGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       232 g~~~~----~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      +++..    ....+ +||||+++|+|.+++..... ..+++...
T Consensus        89 ~~~~~~~~~~~~~~-lv~e~~~gg~L~~~l~~~~~-~~l~~~~~  130 (336)
T 3fhr_A           89 DVYENMHHGKRCLL-IIMECMEGGELFSRIQERGD-QAFTEREA  130 (336)
T ss_dssp             EEEEEEETTEEEEE-EEEECCTTEEHHHHHHTC-C-CCCBHHHH
T ss_pred             HHHhhccCCCceEE-EEEeccCCCCHHHHHHhcCC-CCCCHHHH
Confidence            98765    33355 99999999999999976432 23555433

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=98.76  E-value=4.6e-09  Score=92.81  Aligned_cols=88  Identities=18%  Similarity=0.172  Sum_probs=72.4

Q ss_pred             cCccccceecccCccceeccccccccccccceeec--CCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCc------c
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR--IDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARS------R  226 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~--~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~n------l  226 (282)
                      ++|...+.||+|+||.||+             +..  .++..||+|.+.... ...+ +.+|+.++..++|+|      +
T Consensus        14 ~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i   79 (339)
T 1z57_A           14 ARYEIVDTLGEGAFGKVVE-------------CIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRC   79 (339)
T ss_dssp             TTEEEEEEEEEETTEEEEE-------------EEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCB
T ss_pred             CceEEEEEEecCCCeEEEE-------------EEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceee
Confidence            4678889999999999999             764  357899999986432 2233 899999998887765      8


Q ss_pred             ceeccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          227 PRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       227 v~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ++++ +++...+..+ +||||+ +|+|.+++...
T Consensus        80 ~~~~-~~~~~~~~~~-lv~e~~-~~~l~~~l~~~  110 (339)
T 1z57_A           80 VQML-EWFEHHGHIC-IVFELL-GLSTYDFIKEN  110 (339)
T ss_dssp             CCEE-EEEEETTEEE-EEEECC-CCBHHHHHHHT
T ss_pred             Eeee-cccccCCcEE-EEEcCC-CCCHHHHHHhc
Confidence            9999 9998888888 999999 89999998654

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=98.75  E-value=1.9e-08  Score=95.89  Aligned_cols=83  Identities=11%  Similarity=0.012  Sum_probs=60.6

Q ss_pred             cceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCc--------hhH-HHHHHHHhhhCCCCccceecc
Q 043820          161 NNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVT--------GIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       161 ~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~--------~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      .+.||+|+||.||+             +.. .+..+++|........        ..+ |.+|+.+|.+++|+||+++. 
T Consensus       341 ~~~LG~G~fg~Vy~-------------~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~-  405 (540)
T 3en9_A          341 EHLIGKGAEADIKR-------------DSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPY-  405 (540)
T ss_dssp             -------CCEEEEE-------------EEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCC-
T ss_pred             CCEEeeCCCEEEEE-------------EEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceE-
Confidence            47899999999999             743 4678888876432211        123 89999999999999999777 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      .++...+..+ |||||+++|+|.+++..
T Consensus       406 ~~~~~~~~~~-lVmE~~~ggsL~~~l~~  432 (540)
T 3en9_A          406 IFDVDLDNKR-IMMSYINGKLAKDVIED  432 (540)
T ss_dssp             EEEEETTTTE-EEEECCCSEEHHHHSTT
T ss_pred             EEEEeCCccE-EEEECCCCCCHHHHHHH
Confidence            7777777778 99999999999999864

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=98.75  E-value=1.1e-08  Score=89.87  Aligned_cols=85  Identities=12%  Similarity=0.087  Sum_probs=60.6

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchh--H-HHHHHHHhhhCCCCccceec
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGI--F-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~--~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      .++|...+.||+|+||.||+             +... ++..||+|.+........  + +.++..++..++|+||++++
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~   90 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWK-------------MRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCF   90 (318)
T ss_dssp             GGGEEEEEEC------CEEE-------------EEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEE
T ss_pred             hccccccceeeecCCeeEEE-------------EEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEE
Confidence            35677789999999999999             7764 588999999975443322  2 55555678888999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccc
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNP  255 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~  255 (282)
                       +++...+..+ +||||+ ++.+..
T Consensus        91 -~~~~~~~~~~-lv~e~~-~~~~~~  112 (318)
T 2dyl_A           91 -GTFITNTDVF-IAMELM-GTCAEK  112 (318)
T ss_dssp             -EEEECSSEEE-EEECCC-SEEHHH
T ss_pred             -EEEecCCcEE-EEEecc-CCcHHH
Confidence             9999888888 999999 333433

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=98.74  E-value=1.2e-08  Score=88.63  Aligned_cols=88  Identities=16%  Similarity=0.217  Sum_probs=70.4

Q ss_pred             ccCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCchhHHHHHHHHhhhCCCCccceeccce
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      .++|...+.||+|+||.||+             +.. .++..||+|.+..... ...+.+|+.++..++|++++..+ +.
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vavK~~~~~~~-~~~~~~e~~~l~~l~~~~~i~~~-~~   72 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYL-------------GTDIAAGEEVAIKLECVKTK-HPQLHIESKIYKMMQGGVGIPTI-RW   72 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEE-------------EEETTTTEEEEEEEEESCSS-CCHHHHHHHHHHHHTTSTTCCCE-EE
T ss_pred             ccEEEEEEEEccCCCeEEEE-------------EEEcCCCcEEEEEEecCCcc-hhHHHHHHHHHHHhhcCCCCCcc-cc
Confidence            46788889999999999999             774 4689999999864322 12299999999999998877777 66


Q ss_pred             Eee-CCeEEEEEEecCCCCCccccccC
Q 043820          234 VIR-PGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       234 ~~~-~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +.. +...+ +||||+ +|+|.+++..
T Consensus        73 ~~~~~~~~~-lv~e~~-~~~L~~~~~~   97 (296)
T 3uzp_A           73 CGAEGDYNV-MVMELL-GPSLEDLFNF   97 (296)
T ss_dssp             EEEETTEEE-EEEECC-CCBHHHHHHH
T ss_pred             ccCCCCceE-EEEEec-CCCHHHHHHh
Confidence            644 55556 999999 9999999863

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=98.73  E-value=1.1e-08  Score=94.66  Aligned_cols=97  Identities=13%  Similarity=0.072  Sum_probs=74.8

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhC------CCCccc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKI------YARSRP  227 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l------~H~nlv  227 (282)
                      ..|...+.||+|+||.||+             +... .+..||||++.... ...+ +.+|+.++..+      .|+||+
T Consensus        97 ~ry~~~~~LG~G~fg~V~~-------------a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv  162 (429)
T 3kvw_A           97 YRYEVLKVIGKGSFGQVVK-------------AYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVI  162 (429)
T ss_dssp             TTEEEEEEEEESSSEEEEE-------------EEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBC
T ss_pred             CcEEEEEEcccCccEEEEE-------------EEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEE
Confidence            4588889999999999999             7654 57899999996532 2223 78888887776      577999


Q ss_pred             eeccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCc
Q 043820          228 RSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPD  270 (282)
Q Consensus       228 ~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~  270 (282)
                      +++ +.+......+ +||||+. |+|.+++..... ..++|..
T Consensus       163 ~~~-~~~~~~~~~~-lv~e~~~-~~L~~~l~~~~~-~~~~~~~  201 (429)
T 3kvw_A          163 HML-ENFTFRNHIC-MTFELLS-MNLYELIKKNKF-QGFSLPL  201 (429)
T ss_dssp             CEE-EEEEETTEEE-EEECCCC-CBHHHHHHHTTT-CCCCHHH
T ss_pred             EEE-eecccCCeEE-EEEeccC-CCHHHHHHhccC-CCCCHHH
Confidence            999 9999888888 9999997 689988865431 2355543

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=98.72  E-value=5.7e-09  Score=94.45  Aligned_cols=87  Identities=11%  Similarity=0.061  Sum_probs=67.6

Q ss_pred             cCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCchhH-HHHHHHHhhhCC--------CCc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVTGIF-FARSVTEVAKIY--------ARS  225 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~--------H~n  225 (282)
                      ++|...+.||+|+||.||+             +.. .++..||+|.+... ....+ +.+|+.++..++        |+|
T Consensus        37 ~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~  102 (397)
T 1wak_A           37 GRYHVIRKLGWGHFSTVWL-------------SWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREM  102 (397)
T ss_dssp             TTEEEEEEEEECSSEEEEE-------------EEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGG
T ss_pred             CeEEEEEEeeecCCeeEEE-------------EEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcce
Confidence            5688889999999999999             764 35789999999643 22234 999999999885        788


Q ss_pred             cceeccceEe----eCCeEEEEEEecCCCCCccccccC
Q 043820          226 RPRSYPSVVI----RPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       226 lv~l~~g~~~----~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      |++++ +.+.    .+...+ +||||+ +|+|.+++..
T Consensus       103 iv~~~-~~~~~~~~~~~~~~-lv~e~~-~~~l~~~~~~  137 (397)
T 1wak_A          103 VVQLL-DDFKISGVNGTHIC-MVFEVL-GHHLLKWIIK  137 (397)
T ss_dssp             BCCEE-EEEEEEETTEEEEE-EEECCC-CCBHHHHHHH
T ss_pred             eeeee-cceeecCCCCceEE-EEEecc-CccHHHHHHh
Confidence            99999 8876    334555 999999 5666666653

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=98.70  E-value=1.4e-08  Score=88.10  Aligned_cols=98  Identities=16%  Similarity=0.223  Sum_probs=71.6

Q ss_pred             hccCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceecc
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      ..++|...+.||+|+||.||+             +.. ..+..||+|.+....  ... +.+|+.++..++|++++..+ 
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~-   70 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYL-------------GTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTI-   70 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEE-------------EEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCE-
T ss_pred             cCCceEEeeeecCCCCeEEEE-------------EEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCee-
Confidence            346788889999999999999             764 468899999865322  223 99999999999998888877 


Q ss_pred             ceEee-CCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          232 SVVIR-PGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       232 g~~~~-~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      +.+.. +...+ +||||+ +|+|.+++....  ..+++..+
T Consensus        71 ~~~~~~~~~~~-lv~e~~-~~~L~~~~~~~~--~~~~~~~~  107 (296)
T 4hgt_A           71 RWCGAEGDYNV-MVMELL-GPSLEDLFNFCS--RKFSLKTV  107 (296)
T ss_dssp             EEEEEETTEEE-EEEECC-CCBHHHHHHHTT--SCCCHHHH
T ss_pred             eeecCCCCceE-EEEEcc-CCCHHHHHHHhc--CCCCHHHH
Confidence            76644 55556 999999 999999986432  23555443

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=98.68  E-value=2.4e-08  Score=87.30  Aligned_cols=87  Identities=13%  Similarity=0.081  Sum_probs=66.3

Q ss_pred             HHHHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCc------------------hhH-
Q 043820          150 TIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVT------------------GIF-  210 (282)
Q Consensus       150 el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~------------------~~~-  210 (282)
                      ++.....-|...+.||+|+||.||+             +...+|..||+|.++.....                  ... 
T Consensus        84 ~~~~~~~~~~~~~~iG~G~~g~Vy~-------------~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~  150 (282)
T 1zar_A           84 RLVRSGKVDAIGKLMGEGKESAVFN-------------CYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRS  150 (282)
T ss_dssp             HHHHTTSCSEEEEEEEECSSEEEEE-------------EEETTTEEEEEEEECC------CCCC-------CHHHHHHHH
T ss_pred             HHHhCCeEEEecCEeccCCCceEEE-------------EEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHH
Confidence            3444455566779999999999999             87766899999998643211                  233 


Q ss_pred             HHHHHHHhhhCCCCccceeccceEeeCCeEEEEEEecCCCCCccc
Q 043820          211 FARSVTEVAKIYARSRPRSYPSVVIRPGYKVGLILELKPDPDPNP  255 (282)
Q Consensus       211 f~~e~~~l~~l~H~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~  255 (282)
                      +.+|+.+|..++  | +++. ++.. .+..+ +||||+++|+|.+
T Consensus       151 ~~~E~~~l~~l~--~-~~v~-~~~~-~~~~~-lvmE~~~g~~L~~  189 (282)
T 1zar_A          151 ARNEFRALQKLQ--G-LAVP-KVYA-WEGNA-VLMELIDAKELYR  189 (282)
T ss_dssp             HHHHHHHHHHTT--T-SSSC-CEEE-EETTE-EEEECCCCEEGGG
T ss_pred             HHHHHHHHHhcc--C-CCcC-eEEe-ccceE-EEEEecCCCcHHH
Confidence            899999999999  5 7777 7543 34456 9999999999998

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=98.67  E-value=9.6e-09  Score=94.71  Aligned_cols=82  Identities=18%  Similarity=0.245  Sum_probs=63.8

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccceE
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSVV  234 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~~  234 (282)
                      .|...+.||+|+||.||+             +... .+..||||.+...    .. +.+|+.+|..++|+|||+++ +++
T Consensus        55 ~y~~~~~lG~G~fg~Vy~-------------~~~~~~~~~vaiK~~~~~----~~~~~~E~~il~~l~hpniv~l~-~~~  116 (420)
T 1j1b_A           55 SYTDTKVIGNGSFGVVYQ-------------AKLCDSGELVAIKKVLQD----KRFKNRELQIMRKLDHCNIVRLR-YFF  116 (420)
T ss_dssp             EEEEEEEEEECSSEEEEE-------------EEETTTCCEEEEEEEECC----TTSCCHHHHHHHTCCCTTBCCEE-EEE
T ss_pred             eEEeeeEEeeCCCEEEEE-------------EEECCCCcEEEEEEeccc----chhHHHHHHHHHHcCCCCcccee-eEE
Confidence            467779999999999999             8765 5899999998542    23 56899999999999999999 887


Q ss_pred             eeC----Ce-EEEEEEecCCCCCccccc
Q 043820          235 IRP----GY-KVGLILELKPDPDPNPDR  257 (282)
Q Consensus       235 ~~~----~~-~~~lv~Ey~~~GsL~~~l  257 (282)
                      ...    .. .+++||||+++ +|.+.+
T Consensus       117 ~~~~~~~~~~~~~lv~e~~~~-~l~~~~  143 (420)
T 1j1b_A          117 YSSGEKKDEVYLNLVLDYVPE-TVYRVA  143 (420)
T ss_dssp             EEEETTTTEEEEEEEEECCCE-EHHHHH
T ss_pred             eccCCCCcceeEEeehhcccc-cHHHHH
Confidence            542    12 22399999996 555544

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=98.66  E-value=1.1e-08  Score=93.42  Aligned_cols=81  Identities=17%  Similarity=0.222  Sum_probs=63.8

Q ss_pred             cCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhHHHHHHHHhhhCCCCccceeccceEe
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRPRSYPSVVI  235 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~nlv~l~~g~~~  235 (282)
                      ..|...+.||+|+||.||+             +....+..+|+|++......   ..+|+.+|..++|+|||+++ +++.
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~-------------a~~~~~~~~aikk~~~~~~~---~~~E~~il~~l~h~niv~l~-~~~~  102 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQ-------------AKLVESDEVAIKKVLQDKRF---KNRELQIMRIVKHPNVVDLK-AFFY  102 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEE-------------EEETTTEEEEEEEEECCTTS---CCHHHHHHHTCCCTTBCCEE-EEEE
T ss_pred             ceEEEeEEEeeCCCeEEEE-------------EEECCCCeEEEEEEecCcch---HHHHHHHHHhCCCCCcceEE-EEEE
Confidence            3477779999999999999             88766677999988542211   55799999999999999999 9886


Q ss_pred             eCCe------EEEEEEecCCCCCcc
Q 043820          236 RPGY------KVGLILELKPDPDPN  254 (282)
Q Consensus       236 ~~~~------~~~lv~Ey~~~GsL~  254 (282)
                      ....      .+ +||||++++.+.
T Consensus       103 ~~~~~~~~~~~~-lv~e~~~~~l~~  126 (394)
T 4e7w_A          103 SNGDKKDEVFLN-LVLEYVPETVYR  126 (394)
T ss_dssp             EESSSSSCEEEE-EEEECCSEEHHH
T ss_pred             ecCCCCCceEEE-EEeeccCccHHH
Confidence            5433      55 999999976443

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=98.65  E-value=1e-08  Score=92.24  Aligned_cols=88  Identities=16%  Similarity=0.158  Sum_probs=70.9

Q ss_pred             cCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCchhH-HHHHHHHhhhCC-----------
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVTGIF-FARSVTEVAKIY-----------  222 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~-----------  222 (282)
                      ++|...+.||+|+||.||+             +.. .++..||+|.+.... ...+ +.+|+.++.+++           
T Consensus        19 ~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~   84 (373)
T 1q8y_A           19 ARYILVRKLGWGHFSTVWL-------------AKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMG   84 (373)
T ss_dssp             TTEEEEEEEEECSSEEEEE-------------EEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHH
T ss_pred             CeEEEEEeeeecCCeEEEE-------------EEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccc
Confidence            5688889999999999999             764 468899999986432 2233 889999988886           


Q ss_pred             CCccceeccceEeeCC----eEEEEEEecCCCCCccccccCC
Q 043820          223 ARSRPRSYPSVVIRPG----YKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       223 H~nlv~l~~g~~~~~~----~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      |+||++++ +++...+    ..+ ++|||+ +|+|.+++...
T Consensus        85 ~~~i~~~~-~~~~~~~~~~~~~~-lv~e~~-~~~L~~~~~~~  123 (373)
T 1q8y_A           85 ANHILKLL-DHFNHKGPNGVHVV-MVFEVL-GENLLALIKKY  123 (373)
T ss_dssp             HTTBCCCC-EEEEEEETTEEEEE-EEECCC-CEEHHHHHHHT
T ss_pred             cchHHHHH-HHhhccCCCCceEE-EEEecC-CCCHHHHHHHh
Confidence            88999999 9887543    455 999999 89999998653

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=98.65  E-value=1.4e-08  Score=91.67  Aligned_cols=99  Identities=9%  Similarity=0.073  Sum_probs=60.9

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch---hH-HHHHHHHhhhC--CCCccc
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG---IF-FARSVTEVAKI--YARSRP  227 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~---~~-f~~e~~~l~~l--~H~nlv  227 (282)
                      ..+|...+.||+|+||.||+             +... ++..||+|.+.......   .+ +.+|+.++..+  +||||+
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~-------------~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv  127 (371)
T 3q60_A           61 ERKLKLVEPLRVGDRSVVFL-------------VRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEA  127 (371)
T ss_dssp             EEEEEEEEEEEECSSEEEEE-------------EEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC------
T ss_pred             ceeeeeeeeccCCCCEEEEE-------------EEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhh
Confidence            44577889999999999999             8754 68899999997654322   23 78885544444  699988


Q ss_pred             eeccceEe-------eC-----------------CeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          228 RSYPSVVI-------RP-----------------GYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       228 ~l~~g~~~-------~~-----------------~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      +++ ....       ..                 ...+ +||||++ |+|.+++....  ..+.+..|
T Consensus       128 ~~~-~~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~-lv~e~~~-~~L~~~l~~~~--~~~~~~~~  190 (371)
T 3q60_A          128 RDR-RRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYL-LLMPAAS-VDLELLFSTLD--FVYVFRGD  190 (371)
T ss_dssp             -----CBCCCCEEEEETTSCSSSBCSCC---CCEEEEE-EEECCCS-EEHHHHHHHHH--HSCCCCHH
T ss_pred             hhc-eeEEeeehheecCCCCCeeeccCCcccceeeeEE-EEecCCC-CCHHHHHHHhc--cccchhhh
Confidence            854 3221       11                 2245 9999999 99999997532  23455544

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=98.64  E-value=1.3e-08  Score=90.21  Aligned_cols=93  Identities=27%  Similarity=0.271  Sum_probs=75.6

Q ss_pred             HHhccCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCc------hhH-HHHHHHHhhhCC-
Q 043820          152 ANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVT------GIF-FARSVTEVAKIY-  222 (282)
Q Consensus       152 ~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~------~~~-f~~e~~~l~~l~-  222 (282)
                      ....++|...+.||+|+||.||+             +.. .++..||+|.+......      ... +.+|+.++.+++ 
T Consensus        39 ~~~~~~y~~~~~lg~G~~g~Vy~-------------~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~  105 (320)
T 3a99_A           39 EPLESQYQVGPLLGSGGFGSVYS-------------GIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS  105 (320)
T ss_dssp             -CCTTTEEEEEECSSSSSCEEEE-------------EEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCS
T ss_pred             CCccCceEEEEEEeeCCCeEEEE-------------EEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhcc
Confidence            34456788889999999999999             764 46889999998654322      123 889999999996 


Q ss_pred             -CCccceeccceEeeCCeEEEEEEecCCC-CCccccccC
Q 043820          223 -ARSRPRSYPSVVIRPGYKVGLILELKPD-PDPNPDRLH  259 (282)
Q Consensus       223 -H~nlv~l~~g~~~~~~~~~~lv~Ey~~~-GsL~~~l~~  259 (282)
                       |+||++++ +++...+..+ +|+||+.+ ++|.+++..
T Consensus       106 ~~~~i~~~~-~~~~~~~~~~-lv~e~~~~~~~L~~~l~~  142 (320)
T 3a99_A          106 GFSGVIRLL-DWFERPDSFV-LILERPEPVQDLFDFITE  142 (320)
T ss_dssp             SSCSBCCEE-EEEECSSEEE-EEEECCSSEEEHHHHHHH
T ss_pred             CCCCceEEE-EEEecCCcEE-EEEEcCCCCccHHHHHhc
Confidence             59999999 9999888888 99999986 899998864

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=98.64  E-value=1.7e-08  Score=91.70  Aligned_cols=101  Identities=15%  Similarity=0.102  Sum_probs=76.7

Q ss_pred             HHhccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCC-CC----
Q 043820          152 ANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIY-AR----  224 (282)
Q Consensus       152 ~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~-H~----  224 (282)
                      ....++|...+.||+|+||.||+             +... ++..||+|.+.... .... +..|+.++..++ |+    
T Consensus        50 ~~~~~~y~~~~~lG~G~~g~V~~-------------~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~  115 (382)
T 2vx3_A           50 EKWMDRYEIDSLIGKGSFGQVVK-------------AYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMK  115 (382)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEE-------------EEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGG
T ss_pred             CEeeeeEEEEEEEeecCCEEEEE-------------EEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccc
Confidence            34567899999999999999999             7654 57899999997432 2223 788888888874 55    


Q ss_pred             -ccceeccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCc
Q 043820          225 -SRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPD  270 (282)
Q Consensus       225 -nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~  270 (282)
                       +++++. +.+...+..+ +||||++ |+|.+++..... ..++|..
T Consensus       116 ~~iv~~~-~~~~~~~~~~-lv~e~~~-~~L~~~l~~~~~-~~~~~~~  158 (382)
T 2vx3_A          116 YYIVHLK-RHFMFRNHLC-LVFEMLS-YNLYDLLRNTNF-RGVSLNL  158 (382)
T ss_dssp             GGBCCEE-EEEEETTEEE-EEEECCC-CBHHHHHHHTTT-SCCCHHH
T ss_pred             eeEEEee-eeeccCCceE-EEEecCC-CCHHHHHhhcCc-CCCCHHH
Confidence             399999 9998888888 9999997 599999875431 2345543

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=98.56  E-value=1.1e-07  Score=89.54  Aligned_cols=98  Identities=19%  Similarity=0.268  Sum_probs=74.0

Q ss_pred             ccCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCC-Cccceecc
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVTGIF-FARSVTEVAKIYA-RSRPRSYP  231 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H-~nlv~l~~  231 (282)
                      .++|...+.||+|+||.||+             +.. .++..||||.+....  ... +..|+.++..++| ++++.+. 
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~-------------a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~il~~L~~~~~i~~i~-   69 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYL-------------GTNIQTNEEVAIKLENVKT--KHPQLLYESKIYRILQGGTGIPNVR-   69 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEE-------------EEETTTCCEEEEEEEETTC--SSCCHHHHHHHHHHTTTSTTCCCEE-
T ss_pred             CCcEEEEEEEeeCCCEEEEE-------------EEECCCCcEEEEEEecccc--ccHHHHHHHHHHHHhcCCCCCCeEE-
Confidence            35688889999999999999             774 468999999876432  223 9999999999977 4555566 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      .+.......+ |||||+ +|+|.+++....  ..++|...+
T Consensus        70 ~~~~~~~~~~-lvme~~-g~sL~~ll~~~~--~~l~~~~~~  106 (483)
T 3sv0_A           70 WFGVEGDYNV-LVMDLL-GPSLEDLFNFCS--RKLSLKTVL  106 (483)
T ss_dssp             EEEEETTEEE-EEEECC-CCBHHHHHHHTT--TCCCHHHHH
T ss_pred             EEEeeCCEEE-EEEECC-CCCHHHHHHhhc--CCCCHHHHH
Confidence            6666677777 999999 999999986432  235555443

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=98.55  E-value=4.4e-08  Score=87.12  Aligned_cols=88  Identities=18%  Similarity=0.113  Sum_probs=69.5

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CC-cEEEEEEccCCCCchhH-HHHHHHHhhhCCCCc------c
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DA-RVVAARIVFAGSVTGIF-FARSVTEVAKIYARS------R  226 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~-~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~n------l  226 (282)
                      ++|...+.||+|+||.||+             +... .+ ..||+|.+.... ...+ +.+|+.++..++|++      +
T Consensus        19 ~~y~~~~~lg~G~~g~V~~-------------~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~   84 (355)
T 2eu9_A           19 ERYEIVGNLGEGTFGKVVE-------------CLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLC   84 (355)
T ss_dssp             TTEEEEEEEEEETTEEEEE-------------EEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCB
T ss_pred             ccEEEEEEeeccCCeEEEE-------------EEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeE
Confidence            5688889999999999999             7643 33 689999996432 2233 889999999988776      8


Q ss_pred             ceeccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          227 PRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       227 v~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +.+. +++...+..+ +||||+ +|+|.+++...
T Consensus        85 ~~~~-~~~~~~~~~~-lv~e~~-~~~l~~~l~~~  115 (355)
T 2eu9_A           85 VLMS-DWFNFHGHMC-IAFELL-GKNTFEFLKEN  115 (355)
T ss_dssp             CCEE-EEEEETTEEE-EEEECC-CCBHHHHHHHT
T ss_pred             EEee-eeeeeCCeEE-EEEecc-CCChHHHHHhc
Confidence            8888 8888888888 999999 66777766543

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=98.18  E-value=7.3e-07  Score=85.48  Aligned_cols=67  Identities=6%  Similarity=-0.007  Sum_probs=55.7

Q ss_pred             CcEEEEEEccCCCC----------chhH-HHHHHHHhhhC-CCCccceeccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          193 ARVVAARIVFAGSV----------TGIF-FARSVTEVAKI-YARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       193 ~~~vAvK~l~~~~~----------~~~~-f~~e~~~l~~l-~H~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      |..+|+|.+.....          ...+ |.+|+.+|.++ .|+||++++ ++..+....| |||||++||+|.++|...
T Consensus       259 g~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~-~~~ed~~~~y-LVMEyv~G~~L~d~i~~~  336 (569)
T 4azs_A          259 GEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVL-AHGENAQSGW-LVMEKLPGRLLSDMLAAG  336 (569)
T ss_dssp             CSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEE-EEEECSSEEE-EEEECCCSEEHHHHHHTT
T ss_pred             cceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEE-EEEEECCEEE-EEEecCCCCcHHHHHHhC
Confidence            67899999864321          1123 99999999999 799999999 9998888888 999999999999999754


Q ss_pred             C
Q 043820          261 S  261 (282)
Q Consensus       261 ~  261 (282)
                      .
T Consensus       337 ~  337 (569)
T 4azs_A          337 E  337 (569)
T ss_dssp             C
T ss_pred             C
Confidence            3

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=97.93  E-value=5.9e-06  Score=75.36  Aligned_cols=92  Identities=12%  Similarity=0.037  Sum_probs=57.2

Q ss_pred             HHHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCC-----c---------hhH-HHHHH
Q 043820          151 IANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSV-----T---------GIF-FARSV  215 (282)
Q Consensus       151 l~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~-----~---------~~~-f~~e~  215 (282)
                      +.....-|+....||+|+||.||+             +..++|..||||.++....     .         ... ++.++
T Consensus        90 L~~rg~iY~I~~~IG~Gk~a~VY~-------------a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~  156 (397)
T 4gyi_A           90 HAARKDVYSVGSRIGVGKESDIMI-------------VADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLS  156 (397)
T ss_dssp             HHHTTSCSEEEEEEEECSSEEEEE-------------EECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHH
T ss_pred             HHHCCCEEEecCEeeeCCceEEEE-------------EECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHH
Confidence            333333377889999999999999             8877899999998753211     0         011 33344


Q ss_pred             HHhhhCCCCccceeccceEee------CCeEEEEEEecCCCCCccccc
Q 043820          216 TEVAKIYARSRPRSYPSVVIR------PGYKVGLILELKPDPDPNPDR  257 (282)
Q Consensus       216 ~~l~~l~H~nlv~l~~g~~~~------~~~~~~lv~Ey~~~GsL~~~l  257 (282)
                      ++.....|+||+++. .....      ....+ |||||++++.|.++.
T Consensus       157 rl~A~kE~~nL~rL~-~~gv~vp~p~~~~~~~-LVME~i~G~~L~~l~  202 (397)
T 4gyi_A          157 RLAAIKEFAFMKALY-EEGFPVPEPIAQSRHT-IVMSLVDALPMRQVS  202 (397)
T ss_dssp             HHHHHHHHHHHHHHH-HTTCSCCCEEEEETTE-EEEECCSCEEGGGCC
T ss_pred             HHHHHHHHHHHHHHH-hcCCCCCeeeeccCce-EEEEecCCccHhhhc
Confidence            443344455555554 22111      11225 999999999887764

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=97.85  E-value=9e-06  Score=69.74  Aligned_cols=73  Identities=14%  Similarity=0.231  Sum_probs=52.2

Q ss_pred             ccccceecccCccceeccccccccccccceeec-CCCcE--EEEEEccCCCCc------------------------hhH
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARV--VAARIVFAGSVT------------------------GIF  210 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~--vAvK~l~~~~~~------------------------~~~  210 (282)
                      +...+.||+|+||.||+             +.. .+|..  ||||.+......                        ...
T Consensus        49 ~~i~~~ig~G~~g~Vy~-------------a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (258)
T 1zth_A           49 TAMGGVISTGKEANVFY-------------ADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFI  115 (258)
T ss_dssp             EEEEEEEEECSSEEEEE-------------EEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHH
T ss_pred             hhhCCEEeecceEEEEE-------------EEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHH
Confidence            45668999999999999             876 57888  999986432111                        012


Q ss_pred             -HHHHHHHhhhCCCCcc--ceeccceEeeCCeEEEEEEecCC
Q 043820          211 -FARSVTEVAKIYARSR--PRSYPSVVIRPGYKVGLILELKP  249 (282)
Q Consensus       211 -f~~e~~~l~~l~H~nl--v~l~~g~~~~~~~~~~lv~Ey~~  249 (282)
                       +.+|+..|..++|+++  +.++ ..    ...+ |||||+.
T Consensus       116 ~~~~E~~~l~~l~~~~i~~p~~~-~~----~~~~-lVmE~~g  151 (258)
T 1zth_A          116 WTEKEFRNLERAKEAGVSVPQPY-TY----MKNV-LLMEFIG  151 (258)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCCEE-EE----ETTE-EEEECCE
T ss_pred             HHHHHHHHHHHHHhCCCCCCeEE-Ec----CCCE-EEEEecC
Confidence             8899999999988865  3333 21    3446 9999995

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=97.81  E-value=9.1e-06  Score=74.50  Aligned_cols=58  Identities=7%  Similarity=0.041  Sum_probs=45.0

Q ss_pred             HhccCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCch---hH-HHHHHHHhhhCCC
Q 043820          153 NATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVTG---IF-FARSVTEVAKIYA  223 (282)
Q Consensus       153 ~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~~---~~-f~~e~~~l~~l~H  223 (282)
                      ..+.+|...+.||+|+||.||+             +.. .++..||||++.......   .+ |.+|+.++..++|
T Consensus        75 ~~~~~~~~~~~LG~G~fG~Vy~-------------a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~  137 (413)
T 3dzo_A           75 ERPRTLVRGTVLGQEDPYAYLE-------------ATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG  137 (413)
T ss_dssp             SCCEEEEEEEEEEEETTEEEEE-------------EEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTT
T ss_pred             CCceeEEEecccccCCCEEEEE-------------EEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhcc
Confidence            3445677779999999999999             874 468999999987433322   34 9999999999987

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=97.16  E-value=0.00086  Score=56.82  Aligned_cols=88  Identities=8%  Similarity=0.034  Sum_probs=67.6

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH-HHHHHHHhhhCC-CCccceecc
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF-FARSVTEVAKIY-ARSRPRSYP  231 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~-H~nlv~l~~  231 (282)
                      ...+|.....++.|+.+.||+             ... .+..+++|........... +.+|+.++..+. |.++.+++ 
T Consensus        12 ~l~~~~~~~~~~g~s~~~v~~-------------~~~-~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~-   76 (263)
T 3tm0_A           12 LIEKYRCVKDTEGMSPAKVYK-------------LVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVL-   76 (263)
T ss_dssp             HHTTSEEEECCSCCSSSEEEE-------------EEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEE-
T ss_pred             HhccceeEeeccCCCCCeEEE-------------EEC-CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEE-
Confidence            345676667788888899999             653 3678999998653222334 999999999884 67788899 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccc
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDR  257 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l  257 (282)
                      ++....+..+ +||||+++.+|.+.+
T Consensus        77 ~~~~~~~~~~-lv~e~i~G~~l~~~~  101 (263)
T 3tm0_A           77 HFERHDGWSN-LLMSEADGVLCSEEY  101 (263)
T ss_dssp             EEEEETTEEE-EEEECCSSEEHHHHC
T ss_pred             EEEecCCceE-EEEEecCCeehhhcc
Confidence            8888888888 999999999987753

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=96.57  E-value=0.0025  Score=53.42  Aligned_cols=80  Identities=13%  Similarity=0.139  Sum_probs=57.0

Q ss_pred             CccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCc--cceeccce
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARS--RPRSYPSV  233 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~n--lv~l~~g~  233 (282)
                      ++......+.|..+.||+             ....+|..+++|.....   ... +.+|+.++..+.+.+  +.+++ +.
T Consensus        21 ~~~~~~~~~gg~~~~v~~-------------~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~-~~   83 (264)
T 1nd4_A           21 GYDWAQQTIGCSDAAVFR-------------LSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVL-DV   83 (264)
T ss_dssp             TCEEEECSCTTSSCEEEE-------------EECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEE-EE
T ss_pred             CCceEecccCCCCceEEE-------------EecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEE-Ee
Confidence            344323333555689999             66666778999987543   223 889999999886544  45688 77


Q ss_pred             EeeCCeEEEEEEecCCCCCcc
Q 043820          234 VIRPGYKVGLILELKPDPDPN  254 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~  254 (282)
                      ...++..+ +||||+++.+|.
T Consensus        84 ~~~~~~~~-~v~e~i~G~~l~  103 (264)
T 1nd4_A           84 VTEAGRDW-LLLGEVPGQDLL  103 (264)
T ss_dssp             EECSSCEE-EEEECCSSEETT
T ss_pred             ccCCCCCE-EEEEecCCcccC
Confidence            76666777 999999999885

>2ll3_A Micronemal protein 4; cell adhesion; NMR {Toxoplasma gondii} PDB: 2ll4_M*

Probab=95.66  E-value=0.012  Score=41.05  Aligned_cols=35  Identities=29%  Similarity=0.521  Sum_probs=30.4

Q ss_pred             cCCCHHHHHHHhhcCCCceeEeeccccCCCceeEEecc
Q 043820           13 KSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFG   50 (282)
Q Consensus        13 ~~~~~~~C~~~Cl~nCsC~a~~~~~~~~~~~~C~~~~~   50 (282)
                      ..+++++|+..|+.+=.|.+|.|+.   ....|+++.+
T Consensus        28 ~~~sl~~Cq~aC~a~~~C~aFTyN~---~s~~CflKs~   62 (82)
T 2ll3_A           28 RASSLSECRARCQAEKECSHYTYNV---KSGLCYPKRG   62 (82)
T ss_dssp             ECSSHHHHHHHHHHCTTEEEEEEET---TTTEEEEEES
T ss_pred             cCCCHHHHHHHhhccCCCCeEEecc---CCCceEcccC
Confidence            6789999999999999999999974   3578999754

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=94.77  E-value=0.054  Score=47.95  Aligned_cols=79  Identities=11%  Similarity=0.116  Sum_probs=54.5

Q ss_pred             cceecccCccceeccccccccccccceeecCCCcEEEEEEcc--CCCC-chhH-HHHHHHHhhhCC--CCccceeccceE
Q 043820          161 NNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVF--AGSV-TGIF-FARSVTEVAKIY--ARSRPRSYPSVV  234 (282)
Q Consensus       161 ~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~--~~~~-~~~~-f~~e~~~l~~l~--H~nlv~l~~g~~  234 (282)
                      ...++.|.++.+|+             .... +..+++|+..  .... .... +.+|..++..+.  +.++++++ +.+
T Consensus        43 ~~~l~~G~sn~~y~-------------v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~-~~~  107 (359)
T 3dxp_A           43 VEQFKGGQSNPTFK-------------LVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMY-ALC  107 (359)
T ss_dssp             EEECCC-CCSCEEE-------------EECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEE-EEE
T ss_pred             EEEcCCcccceEEE-------------EEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEE-EEC
Confidence            36789999999999             6554 3577888775  3322 2234 899999999886  45578888 777


Q ss_pred             eeC---CeEEEEEEecCCCCCccc
Q 043820          235 IRP---GYKVGLILELKPDPDPNP  255 (282)
Q Consensus       235 ~~~---~~~~~lv~Ey~~~GsL~~  255 (282)
                      .+.   +..+ +||||+++..+.+
T Consensus       108 ~~~~~~g~~~-~vme~v~G~~l~~  130 (359)
T 3dxp_A          108 EDESVIGRAF-YIMEFVSGRVLWD  130 (359)
T ss_dssp             CCTTTTSSCE-EEEECCCCBCCCC
T ss_pred             CCCCccCCeE-EEEEecCCeecCC
Confidence            665   3467 9999999988853

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=94.31  E-value=0.088  Score=45.08  Aligned_cols=78  Identities=10%  Similarity=0.034  Sum_probs=56.2

Q ss_pred             ccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCC---ccceeccce
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF-FARSVTEVAKIYAR---SRPRSYPSV  233 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~---nlv~l~~g~  233 (282)
                      +.....+|.|..+.||+             ..+.+|..+.+|+-+........ |..|...|..+.-.   .+.+++ +.
T Consensus        17 v~~v~~~g~G~~~~vyr-------------v~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~-~~   82 (288)
T 3f7w_A           17 VAAVAERGHSHRWHLYR-------------VELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVA-GW   82 (288)
T ss_dssp             EEEEEEEEEETTEEEEE-------------EEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEE-EE
T ss_pred             eEEEEecCCCCCeEEEE-------------EEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEE-ec
Confidence            44457889999999999             88889999999987654444444 89999998887432   234444 32


Q ss_pred             EeeCCeEEEEEEecCCCCCcc
Q 043820          234 VIRPGYKVGLILELKPDPDPN  254 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~  254 (282)
                          +..+ +||||++.+...
T Consensus        83 ----~~~~-lv~e~l~~~~~~   98 (288)
T 3f7w_A           83 ----DDRT-LAMEWVDERPPT   98 (288)
T ss_dssp             ----ETTE-EEEECCCCCCCC
T ss_pred             ----cCce-EEEEeecccCCC
Confidence                2235 899999887654

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=89.79  E-value=0.92  Score=39.54  Aligned_cols=75  Identities=17%  Similarity=0.191  Sum_probs=56.1

Q ss_pred             cceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH-HHHHHHHhhhCC---CCccceeccceEee
Q 043820          161 NNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF-FARSVTEVAKIY---ARSRPRSYPSVVIR  236 (282)
Q Consensus       161 ~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~---H~nlv~l~~g~~~~  236 (282)
                      ...|+.|.+..+|+             ... ++..+.+|.....   ... |..|...|..+.   ...+++++ +.+..
T Consensus        41 ~~~l~gG~~n~~y~-------------v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl-~~~~~  102 (312)
T 3jr1_A           41 KEKLYSGEMNEIWL-------------IND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVY-GIGNS  102 (312)
T ss_dssp             EEEECCSSSSEEEE-------------EES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEE-EEEEC
T ss_pred             eEEeCCccceeeeE-------------EEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEE-EEeec
Confidence            36788999999998             554 4567888876532   234 899998888773   35677888 77776


Q ss_pred             CCeEEEEEEecCCCCCcc
Q 043820          237 PGYKVGLILELKPDPDPN  254 (282)
Q Consensus       237 ~~~~~~lv~Ey~~~GsL~  254 (282)
                      .+..+ +||||+++..+.
T Consensus       103 ~g~~~-lvme~l~G~~~~  119 (312)
T 3jr1_A          103 QGHSF-LLLEALNKSKNK  119 (312)
T ss_dssp             SSEEE-EEEECCCCCCCC
T ss_pred             CCceE-EEEEeccCCCCC
Confidence            67777 999999998764

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=89.46  E-value=0.051  Score=50.37  Aligned_cols=57  Identities=9%  Similarity=0.057  Sum_probs=16.6

Q ss_pred             ceecccCccceeccccccccccccceeecCC-CcEEEE------EEccCCCCch--hH-HHHHHHHhhhCCCCccceecc
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARID-ARVVAA------RIVFAGSVTG--IF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~-~~~vAv------K~l~~~~~~~--~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      +.+|   ||.||+             |.+.. ..+||+      |.........  .. |.+|..++..++|+|+++.+ 
T Consensus       148 ~~lG---fG~v~~-------------g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h-  210 (463)
T 3cxl_A          148 EHVG---YTTLNR-------------EPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIH-  210 (463)
T ss_dssp             TTSS---BCCC----------------------CCBGGGC-----------------------------------CBCC-
T ss_pred             ccCC---chhhhc-------------ccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCc-
Confidence            5666   999999             77643 367888      7665433222  23 99999999999999999999 


Q ss_pred             ceEe
Q 043820          232 SVVI  235 (282)
Q Consensus       232 g~~~  235 (282)
                      ++..
T Consensus       211 ~f~~  214 (463)
T 3cxl_A          211 NFKV  214 (463)
T ss_dssp             CEEE
T ss_pred             ceEE
Confidence            7654

>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}

Probab=88.98  E-value=0.098  Score=31.75  Aligned_cols=26  Identities=15%  Similarity=-0.069  Sum_probs=12.2

Q ss_pred             EEEEehhHHHHHHHH---HHHHHHhhccc
Q 043820          103 KIVVIVVPTAALLAA---LILSNISEKTE  128 (282)
Q Consensus       103 iii~i~~~~~~~~~l---~~~~~rr~~~~  128 (282)
                      |..+++.++++++++   +++++|||+.+
T Consensus        13 IA~gVVgGv~~~~ii~~~~~~~~RRr~~~   41 (44)
T 2ks1_B           13 IATGMVGALLLLLVVALGIGLFMRRRHIV   41 (44)
T ss_dssp             STHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred             EEeehhHHHHHHHHHHHHHHHHhhhhHhh
Confidence            334444444443332   45566665554

>2yil_A Microneme antigen L2; sugar binding protein, apple-domain tandem repeat, PAN_AP, P galactose-binding lectin, cellular adhesion; 1.95A {Sarcocystis muris} PDB: 2yio_A* 2yip_A*

Probab=88.65  E-value=0.65  Score=35.55  Aligned_cols=35  Identities=17%  Similarity=0.466  Sum_probs=30.1

Q ss_pred             cCCCHHHHHHHhhcCCCceeEeeccccCCCceeEEecc
Q 043820           13 KSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFG   50 (282)
Q Consensus        13 ~~~~~~~C~~~Cl~nCsC~a~~~~~~~~~~~~C~~~~~   50 (282)
                      ...+.++|+++|...=.|..|+|..   .+..|+++.+
T Consensus        27 ~v~Sa~~Cq~~C~~~~~C~~FTf~~---~~k~C~LK~~   61 (138)
T 2yil_A           27 HVASAQDCMKECQALPTCSHFTYNK---NSKKCHLKAG   61 (138)
T ss_dssp             ECSSHHHHHHHHHHSTTCCEEEEET---TTCEEEEECS
T ss_pred             CCCCHHHHHHHccCCCCCCEEEEEC---CCCEEEeccC
Confidence            6779999999999999999999953   3578999864

>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}

Probab=88.42  E-value=0.092  Score=31.83  Aligned_cols=27  Identities=4%  Similarity=-0.060  Sum_probs=12.8

Q ss_pred             EEEEehhHHHHHHHH---HHHHHHhhcccc
Q 043820          103 KIVVIVVPTAALLAA---LILSNISEKTEN  129 (282)
Q Consensus       103 iii~i~~~~~~~~~l---~~~~~rr~~~~~  129 (282)
                      |..+++.++++++++   +++++|||+.++
T Consensus        12 IA~gVVgGv~~v~ii~~~~~~~~RRRr~~~   41 (44)
T 2l2t_A           12 IAAGVIGGLFILVIVGLTFAVYVRRKSIKK   41 (44)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTCSSC
T ss_pred             EEEeehHHHHHHHHHHHHHHHHhhhhhhhh
Confidence            334444444443332   456666665543

>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A

Probab=88.35  E-value=0.14  Score=31.01  Aligned_cols=27  Identities=15%  Similarity=0.111  Sum_probs=12.1

Q ss_pred             eEEEEehhHHHHHHHH---HHHHHHhhccc
Q 043820          102 TKIVVIVVPTAALLAA---LILSNISEKTE  128 (282)
Q Consensus       102 ~iii~i~~~~~~~~~l---~~~~~rr~~~~  128 (282)
                      ..|++.++++++++++   +++++|||+.+
T Consensus        12 ~~Ia~~vVGvll~vi~~l~~~~~~RRR~~~   41 (44)
T 2jwa_A           12 TSIISAVVGILLVVVLGVVFGILIKRRQQK   41 (44)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHCSC
T ss_pred             cchHHHHHHHHHHHHHHHHHHhheehhhhh
Confidence            3345555554433332   34445555443

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=86.65  E-value=0.77  Score=40.94  Aligned_cols=73  Identities=12%  Similarity=0.118  Sum_probs=46.6

Q ss_pred             ceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC-------chhH-HHHHHHHhhhCCC--Cc-ccee
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV-------TGIF-FARSVTEVAKIYA--RS-RPRS  229 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~-------~~~~-f~~e~~~l~~l~H--~n-lv~l  229 (282)
                      +.+|.|.++.||+             .... .+..+++|.......       .... +..|..++..+..  +. +.++
T Consensus        36 ~~lg~G~~n~vyr-------------v~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~  102 (397)
T 2olc_A           36 QEIGDGNLNYVFH-------------IYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRV  102 (397)
T ss_dssp             EECCSSSSEEEEE-------------EEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCE
T ss_pred             EECCCCceEEEEE-------------EEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeE
Confidence            6789999999999             6543 467899997643211       1123 7788888887632  33 3455


Q ss_pred             ccceEeeCCeEEEEEEecCCCC
Q 043820          230 YPSVVIRPGYKVGLILELKPDP  251 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~G  251 (282)
                      + .+  +.+..+ +||||+++.
T Consensus       103 ~-~~--d~~~~~-lvmE~l~g~  120 (397)
T 2olc_A          103 F-YS--DTEMAV-TVMEDLSHL  120 (397)
T ss_dssp             E-EE--ETTTTE-EEECCCTTS
T ss_pred             E-EE--cCCccE-EEEEeCCCc
Confidence            5 43  344557 999999864

>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}

Probab=86.58  E-value=0.062  Score=49.93  Aligned_cols=32  Identities=6%  Similarity=-0.266  Sum_probs=26.1

Q ss_pred             chhH-HHHHHHHhhhCCCCccceeccceEeeCCe
Q 043820          207 TGIF-FARSVTEVAKIYARSRPRSYPSVVIRPGY  239 (282)
Q Consensus       207 ~~~~-f~~e~~~l~~l~H~nlv~l~~g~~~~~~~  239 (282)
                      ++.+ |.+|++.+++++|+|||+++ |+|.....
T Consensus       321 ~g~~eF~~Eve~L~~i~HrNLV~L~-gyC~s~~~  353 (487)
T 3oja_A          321 QGSETERLECERENQARQREIDALK-EQYRTVID  353 (487)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHH-HHTCCCCC
T ss_pred             ccHHHHHHHHHHHhcccccchhhHH-HHhcChHH
Confidence            3455 99999999999999999999 99987654

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=84.70  E-value=1.7  Score=36.09  Aligned_cols=76  Identities=11%  Similarity=0.016  Sum_probs=52.5

Q ss_pred             eecccCcc-ceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCC-CCccceeccceEeeCC
Q 043820          163 KLGEGGFG-PVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIY-ARSRPRSYPSVVIRPG  238 (282)
Q Consensus       163 ~lG~G~fG-~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~-H~nlv~l~~g~~~~~~  238 (282)
                      .+..|..| .||+             -... ++..+.+|.-...   ... +.+|...|..+. +-.+.+++ +++..++
T Consensus        31 ~~~~G~S~~~v~r-------------l~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~-~~~~~~~   93 (272)
T 4gkh_A           31 RDNVGQSGATIYR-------------LYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIK-HFIRTPD   93 (272)
T ss_dssp             EEECSSSSCEEEE-------------EECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEE-EEEEETT
T ss_pred             EccCCCcCCeEEE-------------EEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEE-EEEEECC
Confidence            34445555 4787             4433 4567888875432   233 888999888773 44567788 8888888


Q ss_pred             eEEEEEEecCCCCCcccc
Q 043820          239 YKVGLILELKPDPDPNPD  256 (282)
Q Consensus       239 ~~~~lv~Ey~~~GsL~~~  256 (282)
                      ..+ +|||++++.++.+.
T Consensus        94 ~~~-lvme~l~G~~~~~~  110 (272)
T 4gkh_A           94 DAW-LLTTAIPGKTAFQV  110 (272)
T ss_dssp             EEE-EEEECCCSEEHHHH
T ss_pred             eEE-EEEEeeCCcccccc
Confidence            888 99999999876553

>4a5v_A MIC4, micronemal protein 4; adhesion; NMR {Toxoplasma gondii}

Probab=83.28  E-value=1.2  Score=34.98  Aligned_cols=36  Identities=17%  Similarity=0.429  Sum_probs=30.0

Q ss_pred             cCCCHHHHHHHhhcCCCceeEeeccccCCCceeEEeccc
Q 043820           13 KSINLNECREKCLENSSCMVYTNLDIRGGGSGCAMWFGE   51 (282)
Q Consensus        13 ~~~~~~~C~~~Cl~nCsC~a~~~~~~~~~~~~C~~~~~~   51 (282)
                      ...+.++|+++|.++=.|.+|.|..   ....|+++...
T Consensus       102 ~~~s~~~Cq~~C~~~~~C~~fTy~~---~~~~C~LK~~~  137 (161)
T 4a5v_A          102 VTSQSADCQAACAADPSCEIFTYNE---HDQKCTFKGRG  137 (161)
T ss_dssp             BCSCHHHHHHHHHHCTTCCEEEEET---TTTEEEEECTT
T ss_pred             cCCCHHHHHHHcccCCCCCEEEeeC---CCCeeEeCCCC
Confidence            4568999999999999999999973   46789996544

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=80.88  E-value=1.1  Score=39.15  Aligned_cols=80  Identities=11%  Similarity=0.070  Sum_probs=53.1

Q ss_pred             cee-cccCccceeccccccccccccceeecC-------CCcEEEEEEccCCC---CchhH-HHHHHHHhhhCCC---Ccc
Q 043820          162 NKL-GEGGFGPVYKVVAAGICFAGTITGARI-------DARVVAARIVFAGS---VTGIF-FARSVTEVAKIYA---RSR  226 (282)
Q Consensus       162 ~~l-G~G~fG~Vy~~~~~~~~~~~~~~g~~~-------~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~H---~nl  226 (282)
                      +.| +.|....+|+             ....       ++..+.+|......   ..... +.+|+.+|..+..   -.+
T Consensus        26 ~~l~~~G~~n~~y~-------------v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpv   92 (357)
T 3ats_A           26 SGVDSTGMSSETII-------------LTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPV   92 (357)
T ss_dssp             EEECTTSSEEEEEE-------------EEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCC
T ss_pred             EECCCCCccceEEE-------------EEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCC
Confidence            556 7788888998             4432       25678888765432   11124 8889888887743   356


Q ss_pred             ceeccceEeeC---CeEEEEEEecCCCCCcccc
Q 043820          227 PRSYPSVVIRP---GYKVGLILELKPDPDPNPD  256 (282)
Q Consensus       227 v~l~~g~~~~~---~~~~~lv~Ey~~~GsL~~~  256 (282)
                      .+++ +.+..+   +..+ +||||+++..+.+.
T Consensus        93 P~v~-~~~~~~~~~g~~~-~v~e~l~G~~l~~~  123 (357)
T 3ats_A           93 PRVR-WIETTGDVLGTPF-FLMDYVEGVVPPDV  123 (357)
T ss_dssp             CCEE-EEECSSTTTSSCE-EEEECCCCBCCCBT
T ss_pred             CcEE-EEccCCCccCCce-EEEEecCCCChhhc
Confidence            6777 666544   3456 99999999887753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	282
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	4e-05
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	1e-04
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-04
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	4e-04
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	4e-04
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	5e-04
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	6e-04
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	6e-04
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	8e-04
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	9e-04
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	0.002
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	0.002
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	0.002
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	0.003
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	0.003
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	0.003
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	0.003
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	0.003
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	0.003
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	0.004
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	0.004
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	0.004
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	0.004
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	0.004
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	0.004

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (98), Expect = 4e-05
 Identities = 16/95 (16%), Positives = 38/95 (40%), Gaps = 15/95 (15%)

Query: 156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIFFARSV 215
           +++ +   +G G +G   K+              + D +++  + +  GS+T       V
Sbjct: 4   EDYEVLYTIGTGSYGRCQKIR------------RKSDGKILVWKELDYGSMTEAEKQMLV 51

Query: 216 TEVAKIYARSRP---RSYPSVVIRPGYKVGLILEL 247
           +EV  +     P   R Y  ++ R    + +++E 
Sbjct: 52  SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEY 86

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 40.5 bits (94), Expect = 1e-04
 Identities = 17/102 (16%), Positives = 32/102 (31%), Gaps = 17/102 (16%)

Query: 156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIFFARSV 215
           ++FS++  +G GGFG VY                    ++ A + +    +         
Sbjct: 4   NDFSVHRIIGRGGFGEVYGCR------------KADTGKMYAMKCLDKKRIKMKQGETLA 51

Query: 216 TEVAKIYARSRPRSYPSVV-----IRPGYKVGLILELKPDPD 252
                + +       P +V          K+  IL+L    D
Sbjct: 52  LNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGD 93

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (93), Expect = 2e-04
 Identities = 18/94 (19%), Positives = 33/94 (35%), Gaps = 11/94 (11%)

Query: 156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIFFARSV 215
           D   +   LG G FG V +  A G              R VA +++  G+         +
Sbjct: 13  DRLKLGKPLGRGAFGQVIEADAFG-------IDKTATCRTVAVKMLKEGATHS-EHRALM 64

Query: 216 TEVAKIYARSRPR---SYPSVVIRPGYKVGLILE 246
           +E+  +          +      +PG  + +I+E
Sbjct: 65  SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVE 98

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 38.7 bits (89), Expect = 4e-04
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 147 ELATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTIT 187
           +L ++    +N      +GEG FG V++  A G+      T
Sbjct: 4   KLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFT 44

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.9 bits (90), Expect = 4e-04
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 154 ATDNFSINNKLGEGGFGPVYKVV 176
             D+F   ++LG G  G V+KV 
Sbjct: 4   KDDDFEKISELGAGNGGVVFKVS 26

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.3 bits (88), Expect = 5e-04
 Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 12/64 (18%)

Query: 156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIFFARSV 215
           +NF    K+GEG +G VYK               ++   VVA + +   + T    + ++
Sbjct: 2   ENFQKVEKIGEGTYGVVYKAR------------NKLTGEVVALKKIRLDTETEGVPSTAI 49

Query: 216 TEVA 219
            E++
Sbjct: 50  REIS 53

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.6 bits (89), Expect = 6e-04
 Identities = 11/38 (28%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 139 MDLELPLFELATIANATDNFSINNKLGEGGFGPVYKVV 176
           MD   P ++   +     + ++ +KLG G +G VY+ V
Sbjct: 2   MDPSSPNYDKWEMER--TDITMKHKLGGGQYGEVYEGV 37

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.2 bits (88), Expect = 6e-04
 Identities = 9/40 (22%), Positives = 11/40 (27%), Gaps = 9/40 (22%)

Query: 146 FELATIANATDNFS---------INNKLGEGGFGPVYKVV 176
           F       A   F+         I   +G G FG V    
Sbjct: 7   FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGH 46

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (87), Expect = 8e-04
 Identities = 7/21 (33%), Positives = 11/21 (52%)

Query: 156 DNFSINNKLGEGGFGPVYKVV 176
           ++    + +GEG FG V K  
Sbjct: 10  NDIKFQDVIGEGNFGQVLKAR 30

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (87), Expect = 9e-04
 Identities = 10/25 (40%), Positives = 18/25 (72%)

Query: 156 DNFSINNKLGEGGFGPVYKVVAAGI 180
           +  +++ +LG+G FG VY+ VA G+
Sbjct: 20  EKITMSRELGQGSFGMVYEGVAKGV 44

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.8 bits (84), Expect = 0.002
 Identities = 12/46 (26%), Positives = 16/46 (34%), Gaps = 5/46 (10%)

Query: 156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIV 201
           D   +   LGEG FG V    A      G           VA +++
Sbjct: 13  DRLVLGKPLGEGAFGQVVLAEA-----IGLDKDKPNRVTKVAVKML 53

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (84), Expect = 0.002
 Identities = 10/24 (41%), Positives = 13/24 (54%), Gaps = 1/24 (4%)

Query: 154 ATDNFSI-NNKLGEGGFGPVYKVV 176
             DN  I + +LG G FG V + V
Sbjct: 6   KRDNLLIADIELGCGNFGSVRQGV 29

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.4 bits (83), Expect = 0.002
 Identities = 7/21 (33%), Positives = 10/21 (47%)

Query: 156 DNFSINNKLGEGGFGPVYKVV 176
              +    +G G FG VYK +
Sbjct: 7   SCVTRQKVIGAGEFGEVYKGM 27

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.3 bits (83), Expect = 0.003
 Identities = 11/26 (42%), Positives = 13/26 (50%), Gaps = 1/26 (3%)

Query: 151 IANATDNFSINNKLGEGGFGPVYKVV 176
           I   T+ F     LG G FG VYK +
Sbjct: 5   ILKETE-FKKIKVLGSGAFGTVYKGL 29

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (83), Expect = 0.003
 Identities = 7/21 (33%), Positives = 12/21 (57%)

Query: 156 DNFSINNKLGEGGFGPVYKVV 176
           ++  +  KLG+G FG V+   
Sbjct: 17  ESLRLEVKLGQGCFGEVWMGT 37

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (83), Expect = 0.003
 Identities = 7/21 (33%), Positives = 12/21 (57%)

Query: 156 DNFSINNKLGEGGFGPVYKVV 176
           +++ +   LGEG +G V   V
Sbjct: 5   EDWDLVQTLGEGAYGEVQLAV 25

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.4 bits (83), Expect = 0.003
 Identities = 11/69 (15%), Positives = 21/69 (30%), Gaps = 12/69 (17%)

Query: 150 TIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGI 209
           TI    + +   + +G G +G V                       VA + +     + I
Sbjct: 12  TIWEVPERYQNLSPVGSGAYGSVCAAF------------DTKTGLRVAVKKLSRPFQSII 59

Query: 210 FFARSVTEV 218
              R+  E+
Sbjct: 60  HAKRTYREL 68

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.2 bits (83), Expect = 0.003
 Identities = 12/71 (16%), Positives = 24/71 (33%), Gaps = 12/71 (16%)

Query: 156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIFFARSV 215
            +F I   LG G FG V+ +             +R + R  A +++    V  +      
Sbjct: 4   QDFQILRTLGTGSFGRVHLIR------------SRHNGRYYAMKVLKKEIVVRLKQVEHT 51

Query: 216 TEVAKIYARSR 226
            +   + +   
Sbjct: 52  NDERLMLSIVT 62

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (82), Expect = 0.003
 Identities = 6/21 (28%), Positives = 10/21 (47%)

Query: 156 DNFSINNKLGEGGFGPVYKVV 176
           +   +  +LG G FG V+   
Sbjct: 13  ETLKLVERLGAGQFGEVWMGY 33

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.7 bits (82), Expect = 0.004
 Identities = 7/21 (33%), Positives = 11/21 (52%)

Query: 156 DNFSINNKLGEGGFGPVYKVV 176
              ++  ++G G FG VYK  
Sbjct: 8   GQITVGQRIGSGSFGTVYKGK 28

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.7 bits (82), Expect = 0.004
 Identities = 11/24 (45%), Positives = 14/24 (58%)

Query: 153 NATDNFSINNKLGEGGFGPVYKVV 176
           N  D + I  +LG+G FG VYK  
Sbjct: 9   NPEDFWEIIGELGDGAFGKVYKAQ 32

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.6 bits (81), Expect = 0.004
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 7/46 (15%)

Query: 156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIV 201
           +  S    LG G FG V +  A G+  +         A  VA +++
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDA-------AMTVAVKML 61

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.3 bits (81), Expect = 0.004
 Identities = 9/21 (42%), Positives = 12/21 (57%)

Query: 156 DNFSINNKLGEGGFGPVYKVV 176
           ++F I   LG+G FG VY   
Sbjct: 6   EDFEIGRPLGKGKFGNVYLAR 26

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.7 bits (82), Expect = 0.004
 Identities = 6/30 (20%), Positives = 15/30 (50%)

Query: 147 ELATIANATDNFSINNKLGEGGFGPVYKVV 176
            + ++ +    ++   K+G+G  G VY  +
Sbjct: 11  SIVSVGDPKKKYTRFEKIGQGASGTVYTAM 40

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (81), Expect = 0.004
 Identities = 5/21 (23%), Positives = 9/21 (42%)

Query: 156 DNFSINNKLGEGGFGPVYKVV 176
              +   ++G G FG V+   
Sbjct: 5   SELTFVQEIGSGQFGLVHLGY 25

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	282
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.68
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.67
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.65
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.65
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.65
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.6
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.58
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.58
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.57
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.57
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.55
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.55
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.54
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.54
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.53
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.53
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.53
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.52
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.52
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.52
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.52
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.52
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.51
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.51
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.5
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.49
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.49
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.49
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.48
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.47
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.46
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.46
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.45
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.42
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.4
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.4
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.4
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.39
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.39
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.38
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.38
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.38
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.33
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.32
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.31
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.29
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.28
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.25
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.2
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.2
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.17
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.17
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.14
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.14
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.13
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.11
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.1
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.08
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.03
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	98.95
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	98.93
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.35
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	98.25
d2qj2a1	91	Hepatocyte growth factor {Human (Homo sapiens) [Ta	91.92
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	90.5
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	84.51

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=1.4e-17  Score=143.01  Aligned_cols=101  Identities=15%  Similarity=0.168  Sum_probs=86.2

Q ss_pred             cCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhHHHHHHHHhhhCCCCccceeccceEe
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRPRSYPSVVI  235 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~nlv~l~~g~~~  235 (282)
                      ++|...+.||+|+||.||+             |...++..||||+++.......+|.+|+.++.+++|||||+++ |+|.
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~-------------~~~~~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~HpnIv~~~-g~~~   70 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHL-------------GYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLY-GVCL   70 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEE-------------EEETTTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEE-EEEC
T ss_pred             HHcEEEEEEeeCCCeEEEE-------------EEECCCCEEEEEEECCCcCcHHHHHHHHHHHHhcCCCCccccc-ceec
Confidence            4677889999999999999             8887888999999976444333399999999999999999999 9999


Q ss_pred             eCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcccc
Q 043820          236 RPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPAQ  273 (282)
Q Consensus       236 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~~  273 (282)
                      .++..+ +||||+++|+|.+++....  ..++|..+++
T Consensus        71 ~~~~~~-lv~E~~~~g~L~~~l~~~~--~~~~~~~~~~  105 (263)
T d1sm2a_          71 EQAPIC-LVFEFMEHGCLSDYLRTQR--GLFAAETLLG  105 (263)
T ss_dssp             SSSSCE-EEEECCTTCBHHHHHHTTT--TCCCHHHHHH
T ss_pred             cCCceE-EEEEecCCCcHHHHhhccc--cCCCHHHHHH
Confidence            988888 9999999999999987654  3577776653

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.67  E-value=8e-18  Score=146.37  Aligned_cols=110  Identities=15%  Similarity=0.119  Sum_probs=90.2

Q ss_pred             CHHHHHHhccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhHHHHHHHHhhhCCCCc
Q 043820          147 ELATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIFFARSVTEVAKIYARS  225 (282)
Q Consensus       147 ~~~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~n  225 (282)
                      .|++|+...++|...+.||+|+||.||+             |... .+..||||.++........|.+|+.+|++++|||
T Consensus         8 ~~~~wei~~~~~~~~~~iG~G~fg~Vy~-------------a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~Hpn   74 (287)
T d1opja_           8 NYDKWEMERTDITMKHKLGGGQYGEVYE-------------GVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN   74 (287)
T ss_dssp             TCCTTBCCGGGEEEEEETTTTTTSSEEE-------------EEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHCCCTT
T ss_pred             CCcccEecHHHeEEeeEEeeCCCeEEEE-------------EEECCCCeEEEEEEECCccchHHHHHHHHHHHHhCCCCC
Confidence            4445555667888889999999999999             8765 4789999999765443333999999999999999


Q ss_pred             cceeccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          226 RPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       226 lv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      ||+++ |++.+++..+ +||||+++|+|.++|.... ...++|..++
T Consensus        75 Iv~~~-~~~~~~~~~~-iv~E~~~~g~l~~~l~~~~-~~~~~~~~~~  118 (287)
T d1opja_          75 LVQLL-GVCTREPPFY-IITEFMTYGNLLDYLRECN-RQEVSAVVLL  118 (287)
T ss_dssp             BCCEE-EEECSSSSCE-EEEECCTTCBHHHHHHHSC-TTTSCHHHHH
T ss_pred             EecCC-ccEeeCCeeE-EEeecccCcchHHHhhhcc-ccchHHHHHH
Confidence            99999 9999888888 9999999999999997543 2357776554

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.65  E-value=1.8e-17  Score=144.92  Aligned_cols=112  Identities=16%  Similarity=0.155  Sum_probs=89.0

Q ss_pred             ccCHHHHHHhccCc---------cccceecccCccceeccccccccccccceeecCC----CcEEEEEEccCCCCch-hH
Q 043820          145 LFELATIANATDNF---------SINNKLGEGGFGPVYKVVAAGICFAGTITGARID----ARVVAARIVFAGSVTG-IF  210 (282)
Q Consensus       145 ~~~~~el~~at~~f---------~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~----~~~vAvK~l~~~~~~~-~~  210 (282)
                      .++|+++..++.+|         ...+.||+|+||.||+             |....    ...||||.+....... .+
T Consensus         6 ~~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~-------------~~~~~~~~~~~~vavK~~~~~~~~~~~~   72 (299)
T d1jpaa_           6 PFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCS-------------GHLKLPGKREIFVAIKTLKSGYTEKQRR   72 (299)
T ss_dssp             GGGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEE-------------EEECC---CCEEEEEEECCSSCCHHHHH
T ss_pred             CCCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEE-------------EEEeCCCCEEEEEEEEEECcccCHHHHH
Confidence            46677777776555         3457899999999999             76542    2368999987644433 34


Q ss_pred             -HHHHHHHhhhCCCCccceeccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcccc
Q 043820          211 -FARSVTEVAKIYARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPAQ  273 (282)
Q Consensus       211 -f~~e~~~l~~l~H~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~~  273 (282)
                       |.+|+.+|++++|||||+++ |++..++..+ +||||+++|+|.+++....  ..++|.++++
T Consensus        73 ~~~~E~~~l~~l~HpnIv~l~-g~~~~~~~~~-iv~Ey~~~g~L~~~~~~~~--~~l~~~~~~~  132 (299)
T d1jpaa_          73 DFLSEASIMGQFDHPNVIHLE-GVVTKSTPVM-IITEFMENGSLDSFLRQND--GQFTVIQLVG  132 (299)
T ss_dssp             HHHHHHHHHTTCCCTTBCCEE-EEECSSSSCE-EEEECCTTEEHHHHHHTTT--TCSCHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCccEE-EEEeeCCEEE-EEEEecCCCcceeeecccc--CCCCHHHHHH
Confidence             99999999999999999999 9999888888 9999999999999887644  3578877653

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=3e-17  Score=140.53  Aligned_cols=100  Identities=17%  Similarity=0.154  Sum_probs=85.4

Q ss_pred             cCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhHHHHHHHHhhhCCCCccceeccceEe
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRPRSYPSVVI  235 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~nlv~l~~g~~~  235 (282)
                      ++|+..++||+|+||.||+             |..+++..||||.++.......+|.+|+.++.+++|||||+++ |++.
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~-------------~~~~~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~HpnIv~~~-g~~~   69 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKY-------------GKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLY-GVCT   69 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEE-------------EEETTTEEEEEEEEESSSSCHHHHHHHHHHHHTCCCTTBCCEE-EEEC
T ss_pred             HHCEEeEEEecCCCeEEEE-------------EEECCCCEEEEEEECcCcCCHHHHHHHHHHHHhcCCCceeeEE-EEEe
Confidence            5788889999999999999             9887888999999986544443499999999999999999999 9999


Q ss_pred             eCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          236 RPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       236 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      +.+..+ +||||+++|+|.+++....  ..++|..++
T Consensus        70 ~~~~~~-iv~Ey~~~g~l~~~~~~~~--~~~~~~~~~  103 (258)
T d1k2pa_          70 KQRPIF-IITEYMANGCLLNYLREMR--HRFQTQQLL  103 (258)
T ss_dssp             CSSSEE-EEEECCTTEEHHHHHHSGG--GCCCHHHHH
T ss_pred             eCCceE-EEEEccCCCcHHHhhhccc--cCCcHHHHH
Confidence            888888 9999999999999987654  245665554

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=1.1e-17  Score=144.38  Aligned_cols=106  Identities=19%  Similarity=0.173  Sum_probs=85.7

Q ss_pred             HHHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhHHHHHHHHhhhCCCCccceec
Q 043820          151 IANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       151 l~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ++...++|...+.||+|+||.||+             |.+.++..||||+++........|.+|+.+|.+++|||||+++
T Consensus         8 wei~~~~~~~~~~iG~G~fg~Vy~-------------~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~   74 (272)
T d1qpca_           8 WEVPRETLKLVERLGAGQFGEVWM-------------GYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY   74 (272)
T ss_dssp             TBCCGGGEEEEEEEEEETTEEEEE-------------EEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             eecCHHHeEEeEEEecCCCcEEEE-------------EEECCCCEEEEEEEccCcCCHHHHHHHHHHHHhCCCCCEeEEE
Confidence            334456788889999999999999             8887788999999976544333399999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcccc
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPAQ  273 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~~  273 (282)
                       |++.+ +..+ +||||+++|+|.+++.... ...++|..+++
T Consensus        75 -g~~~~-~~~~-iv~Ey~~~g~L~~~~~~~~-~~~l~~~~~~~  113 (272)
T d1qpca_          75 -AVVTQ-EPIY-IITEYMENGSLVDFLKTPS-GIKLTINKLLD  113 (272)
T ss_dssp             -EEECS-SSCE-EEEECCTTCBHHHHTTSHH-HHTCCHHHHHH
T ss_pred             -eeecc-CCeE-EEEEeCCCCcHHHHHhhcC-CCCCCHHHHHH
Confidence             98754 4557 9999999999999886543 23578877653

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=6.5e-17  Score=140.41  Aligned_cols=103  Identities=18%  Similarity=0.241  Sum_probs=84.7

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhHHHHHHHHhhhCCCCccceeccce
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      ..++|...+.||+|+||.||+             |...++..||||.++........|.+|+.+|.+++|+|||+++ |+
T Consensus        15 ~~~~~~i~~~iG~G~fg~Vy~-------------~~~~~~~~vAiK~l~~~~~~~~~~~~E~~~l~~l~h~nIv~~~-g~   80 (285)
T d1fmka3          15 PRESLRLEVKLGQGCFGEVWM-------------GTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY-AV   80 (285)
T ss_dssp             CGGGEEEEEEEEECSSCEEEE-------------EEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEE-EE
T ss_pred             CHHHEEEeeEEeeCCCeEEEE-------------EEECCCCEEEEEEECcccCCHHHHHHHHHHHHhcccCCEeEEE-EE
Confidence            345788889999999999999             9888888899999975443332399999999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcccc
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPAQ  273 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~~  273 (282)
                      +.+ ++.+ +||||+++|+|..++.... ...++|..+++
T Consensus        81 ~~~-~~~~-lv~Ey~~~g~l~~~~~~~~-~~~l~~~~~~~  117 (285)
T d1fmka3          81 VSE-EPIY-IVTEYMSKGSLLDFLKGET-GKYLRLPQLVD  117 (285)
T ss_dssp             ECS-SSCE-EEECCCTTCBHHHHHSHHH-HTTCCHHHHHH
T ss_pred             Eec-CCeE-EEEEecCCCchhhhhhhcc-cccchHHHHHH
Confidence            854 5567 9999999999999987643 23588887754

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=5.3e-16  Score=134.59  Aligned_cols=99  Identities=19%  Similarity=0.215  Sum_probs=78.1

Q ss_pred             cCccccc-eecccCccceeccccccccccccceeecC---CCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCcccee
Q 043820          156 DNFSINN-KLGEGGFGPVYKVVAAGICFAGTITGARI---DARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRS  229 (282)
Q Consensus       156 ~~f~~~~-~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~---~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l  229 (282)
                      +++...+ +||+|+||.||+             |...   ++..||||.++...... .+ |.+|+.+|.+++|||||++
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~-------------~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l   74 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQ-------------GVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRL   74 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEE-------------EEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             cCeEECCcEEecccCeEEEE-------------EEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeE
Confidence            4555556 599999999999             7643   35689999997654433 34 9999999999999999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      + |++.. +..+ |||||+++|+|.+++....  ..++|..++
T Consensus        75 ~-g~~~~-~~~~-lvmE~~~~g~L~~~l~~~~--~~l~~~~~~  112 (285)
T d1u59a_          75 I-GVCQA-EALM-LVMEMAGGGPLHKFLVGKR--EEIPVSNVA  112 (285)
T ss_dssp             E-EEEES-SSEE-EEEECCTTEEHHHHHTTCT--TTSCHHHHH
T ss_pred             e-eeecc-CeEE-EEEEeCCCCcHHHHhhccc--cCCCHHHHH
Confidence            9 98864 4567 9999999999999986543  357776654

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=2.2e-16  Score=136.32  Aligned_cols=101  Identities=13%  Similarity=0.124  Sum_probs=81.0

Q ss_pred             HHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCC--CchhH-HHHHHHHhhhCCCCccce
Q 043820          152 ANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGS--VTGIF-FARSVTEVAKIYARSRPR  228 (282)
Q Consensus       152 ~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~--~~~~~-f~~e~~~l~~l~H~nlv~  228 (282)
                      +...++|...+.||+|+||.||+             |...  ..||||.++...  ....+ |.+|+.+|.+++|||||+
T Consensus         4 ei~~~~~~~~~~lG~G~fg~Vy~-------------~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~   68 (276)
T d1uwha_           4 EIPDGQITVGQRIGSGSFGTVYK-------------GKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL   68 (276)
T ss_dssp             BCCTTCCCCCSEEEECSSCEEEE-------------EESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             ccccccEEEEEEEeeCCCcEEEE-------------EEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEee
Confidence            33456788889999999999999             8754  369999997543  23334 999999999999999999


Q ss_pred             eccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          229 SYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       229 l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      ++ |++.+ +..+ +||||+++|+|.++|....  ..++|..++
T Consensus        69 ~~-~~~~~-~~~~-lv~Ey~~~g~L~~~l~~~~--~~~~~~~~~  107 (276)
T d1uwha_          69 FM-GYSTA-PQLA-IVTQWCEGSSLYHHLHIIE--TKFEMIKLI  107 (276)
T ss_dssp             EE-EEECS-SSCE-EEEECCCEEEHHHHHHTSC--CCCCHHHHH
T ss_pred             ee-EEEec-cEEE-EEEecCCCCCHHHHHhhcc--CCCCHHHHH
Confidence            99 98764 4566 9999999999999997544  247777665

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.57  E-value=5.5e-16  Score=135.30  Aligned_cols=103  Identities=19%  Similarity=0.214  Sum_probs=84.0

Q ss_pred             HHHHHHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCc
Q 043820          148 LATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARS  225 (282)
Q Consensus       148 ~~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~n  225 (282)
                      +.+|+.++++|...+.||+|+||.||++...+.       ....++..||||+++...... .+ |.+|+.+|++++|+|
T Consensus         5 ~~~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~-------~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~n   77 (301)
T d1lufa_           5 LLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGL-------LPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPN   77 (301)
T ss_dssp             HHHTBCCGGGCEEEEEEEECSSCEEEEEEEETS-------STTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTT
T ss_pred             hhhccCCHHHcEEeEEEeeCCCeEEEEEEECCC-------ccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCC
Confidence            456677888999999999999999999332211       112346789999997654443 34 999999999999999


Q ss_pred             cceeccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          226 RPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       226 lv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      |++++ |++...+..+ ++|||+++|+|.++|+.
T Consensus        78 iv~~~-~~~~~~~~~~-~v~e~~~~g~L~~~l~~  109 (301)
T d1lufa_          78 IVKLL-GVCAVGKPMC-LLFEYMAYGDLNEFLRS  109 (301)
T ss_dssp             BCCEE-EEECSSSSCE-EEEECCTTCBHHHHHHH
T ss_pred             cccce-eeeccCCceE-EEEEecCCCcHHHHHHh
Confidence            99999 9999988888 99999999999999964

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=1.8e-15  Score=130.23  Aligned_cols=90  Identities=16%  Similarity=0.150  Sum_probs=76.0

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCccceeccc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      ++|...+.||+|+||.||+             +... ++..||+|+++..... ..+ |.+|+.+|++++|||||+++ +
T Consensus         5 ~dy~~~~~lG~G~fg~V~~-------------~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~-~   70 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQL-------------AVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY-G   70 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEE-------------EEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEE-E
T ss_pred             cceEEEEEEecCcCeEEEE-------------EEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEe-e
Confidence            4688889999999999999             7754 5899999998754332 334 99999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ++.+++..+ |||||+++|+|.++|...
T Consensus        71 ~~~~~~~~~-ivmEy~~gg~L~~~l~~~   97 (271)
T d1nvra_          71 HRREGNIQY-LFLEYCSGGELFDRIEPD   97 (271)
T ss_dssp             EEEETTEEE-EEEECCTTEEGGGGSBTT
T ss_pred             eeccCceeE-EEEeccCCCcHHHHHhcC
Confidence            999999888 999999999999999754

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=5.7e-16  Score=135.71  Aligned_cols=101  Identities=22%  Similarity=0.262  Sum_probs=80.5

Q ss_pred             HHHHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchh-H-HHHHHHHhhhCCCCccc
Q 043820          150 TIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGI-F-FARSVTEVAKIYARSRP  227 (282)
Q Consensus       150 el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~-~-f~~e~~~l~~l~H~nlv  227 (282)
                      +|+...++|...+.||+|+||.||++...+.       ....++..||||+++....... . |.+|+.++.+++|||||
T Consensus        14 ~~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~-------~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv   86 (308)
T d1p4oa_          14 EWEVAREKITMSRELGQGSFGMVYEGVAKGV-------VKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV   86 (308)
T ss_dssp             TTBCCGGGEEEEEEEEECSSSEEEEEEEEEE-------ETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBC
T ss_pred             ceeecHHHeEEeeEEeeCCCeEEEEEEECCc-------ccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEe
Confidence            3444556788889999999999999433322       1112357899999976444333 3 99999999999999999


Q ss_pred             eeccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          228 RSYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       228 ~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +++ |++...+..+ +||||+++|+|.++++.
T Consensus        87 ~~~-~~~~~~~~~~-lv~e~~~~g~l~~~~~~  116 (308)
T d1p4oa_          87 RLL-GVVSQGQPTL-VIMELMTRGDLKSYLRS  116 (308)
T ss_dssp             CEE-EEECSSSSCE-EEEECCTTCBHHHHHHH
T ss_pred             eee-eEEecCCcee-EEEeecCCCCHHHHHHh
Confidence            999 9999888888 99999999999999874

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=2.5e-15  Score=130.45  Aligned_cols=89  Identities=18%  Similarity=0.240  Sum_probs=78.6

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      +.|...+.||+|+||.||+             +... ++..||+|.++.......+ |.+|+.+|++++|||||+++ ++
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~-------------~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~-~~   77 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYK-------------AQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL-DA   77 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEE-------------EEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEE-EE
T ss_pred             cCeEEeEEEeeCCCcEEEE-------------EEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEE-EE
Confidence            4577789999999999999             7754 5889999999766555556 99999999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccC
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +.+.+..+ +||||+++|+|.+++..
T Consensus        78 ~~~~~~~~-lvmEy~~~g~L~~~~~~  102 (288)
T d2jfla1          78 FYYENNLW-ILIEFCAGGAVDAVMLE  102 (288)
T ss_dssp             EEETTEEE-EEEECCTTEEHHHHHHH
T ss_pred             EeeCCeEE-EEEecCCCCcHHHHHHh
Confidence            99999888 99999999999998764

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=1.3e-16  Score=136.87  Aligned_cols=100  Identities=12%  Similarity=0.106  Sum_probs=79.4

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccce
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      .++|...+.||+|+||.||+             |.. .|..||||+++..  ...+ |.+|+.++++++|||||+++ |+
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~-------------~~~-~~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~-g~   68 (262)
T d1byga_           6 MKELKLLQTIGKGEFGDVML-------------GDY-RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLL-GV   68 (262)
T ss_dssp             GGGEEEEEEEEECSSCEEEE-------------EEE-TTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEE-EE
T ss_pred             HHHeEEeEEEecCCCeEEEE-------------EEE-CCeEEEEEEECcH--HHHHHHHHHHHHHHhCCCCCEeeEE-EE
Confidence            34677779999999999999             877 4788999999643  2334 99999999999999999999 99


Q ss_pred             EeeCCe-EEEEEEecCCCCCccccccCCCCCcCCCCCcccc
Q 043820          234 VIRPGY-KVGLILELKPDPDPNPDRLHSSRVRSLQYPDPAQ  273 (282)
Q Consensus       234 ~~~~~~-~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~~  273 (282)
                      |.+.+. .+ +||||+++|+|.++|+... ...++|..+++
T Consensus        69 ~~~~~~~~~-lv~ey~~~g~L~~~l~~~~-~~~l~~~~~~~  107 (262)
T d1byga_          69 IVEEKGGLY-IVTEYMAKGSLVDYLRSRG-RSVLGGDCLLK  107 (262)
T ss_dssp             ECCC--CCE-EEECCCTTEEHHHHHHHHH-HHHCCHHHHHH
T ss_pred             EEecCCcEE-EEEeccCCCCHHHHHHhcC-CCCCCHHHHHH
Confidence            976544 55 9999999999999997532 23478876654

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=1.2e-15  Score=134.46  Aligned_cols=92  Identities=15%  Similarity=0.146  Sum_probs=79.4

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCccceec
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ..++|+..+.||+|+||.||+             +... +|..||+|.++...... .. +.+|+.+|.+++|||||+++
T Consensus         4 ~~d~y~~~~~iG~G~fg~V~~-------------~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~   70 (322)
T d1s9ja_           4 KDDDFEKISELGAGNGGVVFK-------------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFY   70 (322)
T ss_dssp             CGGGEEEEEEEECCSSCCEEE-------------EEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEE
T ss_pred             CccCCEEEEEEecCCCeEEEE-------------EEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEE
Confidence            356788889999999999999             7754 68999999997543333 34 99999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                       +++.+.+..+ +||||+++|+|.++|...
T Consensus        71 -~~~~~~~~~~-iVmEy~~gg~L~~~l~~~   98 (322)
T d1s9ja_          71 -GAFYSDGEIS-ICMEHMDGGSLDQVLKKA   98 (322)
T ss_dssp             -EEEECSSEEE-EEEECCTTEEHHHHHHHH
T ss_pred             -EEEEECCEEE-EEEEcCCCCcHHHHHhhc
Confidence             9999988888 999999999999999643

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=1.2e-15  Score=131.72  Aligned_cols=92  Identities=16%  Similarity=0.122  Sum_probs=71.9

Q ss_pred             ceecccCccceeccccccccccccceeecC---CCcEEEEEEccCCCCc--hhH-HHHHHHHhhhCCCCccceeccceEe
Q 043820          162 NKLGEGGFGPVYKVVAAGICFAGTITGARI---DARVVAARIVFAGSVT--GIF-FARSVTEVAKIYARSRPRSYPSVVI  235 (282)
Q Consensus       162 ~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~---~~~~vAvK~l~~~~~~--~~~-f~~e~~~l~~l~H~nlv~l~~g~~~  235 (282)
                      ++||+|+||.||+             |.+.   .+..||||+++.....  ..+ |.+|+.+|.+++|||||+++ |+|.
T Consensus        13 k~iG~G~fG~Vy~-------------~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~-g~~~   78 (277)
T d1xbba_          13 KELGSGNFGTVKK-------------GYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI-GICE   78 (277)
T ss_dssp             EEEEECSSEEEEE-------------EEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEE-EEEE
T ss_pred             CCcccCCCeEEEE-------------EEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEE-EEec
Confidence            5799999999999             7643   2468999999653322  234 99999999999999999999 9985


Q ss_pred             eCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          236 RPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       236 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      . +..+ |||||+++|+|.+++....   .++|..++
T Consensus        79 ~-~~~~-lvmE~~~~g~L~~~l~~~~---~l~~~~~~  110 (277)
T d1xbba_          79 A-ESWM-LVMEMAELGPLNKYLQQNR---HVKDKNII  110 (277)
T ss_dssp             S-SSEE-EEEECCTTEEHHHHHHHCT---TCCHHHHH
T ss_pred             c-CCEE-EEEEcCCCCcHHHHHhhcc---CCCHHHHH
Confidence            4 4567 9999999999999987543   47776654

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=1.9e-15  Score=132.34  Aligned_cols=90  Identities=19%  Similarity=0.193  Sum_probs=73.7

Q ss_pred             cCccccceecccCccceeccccccccccccceeecCC-Cc--EEEEEEccCCCCc-hhH-HHHHHHHhhhC-CCCcccee
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARID-AR--VVAARIVFAGSVT-GIF-FARSVTEVAKI-YARSRPRS  229 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~-~~--~vAvK~l~~~~~~-~~~-f~~e~~~l~~l-~H~nlv~l  229 (282)
                      ++|...+.||+|+||.||+             |...+ +.  .||||+++..... ..+ |.+|+.+|.++ +|||||++
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~-------------~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~   76 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLK-------------ARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL   76 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEE-------------EEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCE
T ss_pred             HHcEEEEEEeeCCCcEEEE-------------EEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeE
Confidence            4677779999999999999             77643 33  5788988654333 334 99999999999 79999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      + |++...+..+ +||||+++|+|.++|+..
T Consensus        77 ~-~~~~~~~~~~-iV~ey~~~g~L~~~l~~~  105 (309)
T d1fvra_          77 L-GACEHRGYLY-LAIEYAPHGNLLDFLRKS  105 (309)
T ss_dssp             E-EEEEETTEEE-EEECCCTTCBHHHHHHTT
T ss_pred             E-EEEecCCeeE-EEEEecCCCcHHHHHhhc
Confidence            9 9999999888 999999999999999764

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=6.4e-15  Score=128.14  Aligned_cols=89  Identities=11%  Similarity=0.065  Sum_probs=77.9

Q ss_pred             cCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      +.|...+.||+|+||.||+             +.. .+|..||+|.+........+ +.+|+.+|++++|||||+++ ++
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~-------------a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~-~~   85 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYT-------------AMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYL-DS   85 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEE-------------EEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEE-EE
T ss_pred             cccEEEEEEecCcCcEEEE-------------EEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEe-EE
Confidence            4588889999999999999             764 35899999998765444455 99999999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccC
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +.+.+..+ +||||+++|+|.+++..
T Consensus        86 ~~~~~~~~-ivmEy~~gg~L~~~~~~  110 (293)
T d1yhwa1          86 YLVGDELW-VVMEYLAGGSLTDVVTE  110 (293)
T ss_dssp             EEETTEEE-EEEECCTTCBHHHHHHH
T ss_pred             EEECCEEE-EEEEecCCCcHHHHhhc
Confidence            99999888 99999999999988754

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.52  E-value=6e-15  Score=131.45  Aligned_cols=91  Identities=15%  Similarity=0.194  Sum_probs=79.6

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      ++|...+.||+|+||.||+             +... +|..||||.+........+ +.+|+.+|.+++|||||+++ ++
T Consensus        26 ~~Y~i~~~lG~G~fg~Vy~-------------~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~-~~   91 (350)
T d1koaa2          26 DHYDIHEELGTGAFGVVHR-------------VTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLH-DA   91 (350)
T ss_dssp             GTEEEEEEEEEETTEEEEE-------------EEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEE-EE
T ss_pred             cCeEEEEEEecCcCeEEEE-------------EEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEE-EE
Confidence            4688889999999999999             7654 6899999999765444455 99999999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccCCC
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      +.+.+..+ +||||+++|+|.++|....
T Consensus        92 ~~~~~~~~-ivmE~~~gg~L~~~l~~~~  118 (350)
T d1koaa2          92 FEDDNEMV-MIYEFMSGGELFEKVADEH  118 (350)
T ss_dssp             EEETTEEE-EEECCCCSCBHHHHHTCTT
T ss_pred             EEECCEEE-EEEEcCCCCCHHHHHHhhc
Confidence            99998888 9999999999999996543

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.52  E-value=2e-15  Score=132.25  Aligned_cols=91  Identities=16%  Similarity=0.197  Sum_probs=74.5

Q ss_pred             ccCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchh-H-HHHHHHHhhhCCCCccceecc
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGI-F-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~-~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      .+.|...+.||+|+||.||+             +... ++..||||.+........ . +.+|+.+|.+++|||||+++ 
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~-------------~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~-   73 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVIL-------------AEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALD-   73 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEE-------------EEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEE-
T ss_pred             ccceEEEEEEeeccCeEEEE-------------EEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEE-
Confidence            35588889999999999999             7654 588999999975443333 3 89999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +++.+++..+ |||||+++|+|.++|...
T Consensus        74 ~~~~~~~~~~-lvmE~~~gg~L~~~l~~~  101 (307)
T d1a06a_          74 DIYESGGHLY-LIMQLVSGGELFDRIVEK  101 (307)
T ss_dssp             EEEECSSEEE-EEECCCCSCBHHHHHHTC
T ss_pred             EEEEECCEEE-EEEeccCCCcHHHhhhcc
Confidence            9998888888 999999999999999754

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=8.6e-15  Score=127.09  Aligned_cols=89  Identities=20%  Similarity=0.135  Sum_probs=76.4

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc------hhH-HHHHHHHhhhCCCCccc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT------GIF-FARSVTEVAKIYARSRP  227 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~------~~~-f~~e~~~l~~l~H~nlv  227 (282)
                      +.|...+.||+|+||.||+             +... +|..||||.++.....      ..+ |.+|+.+|.+++|||||
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~-------------~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv   76 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKK-------------CREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI   76 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEE-------------EEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBC
T ss_pred             cCEEEeEEEecCCCeEEEE-------------EEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCC
Confidence            4588889999999999999             7754 6899999998643211      234 99999999999999999


Q ss_pred             eeccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          228 RSYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       228 ~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +++ +++.+.+..+ |||||+++|+|.++|..
T Consensus        77 ~~~-~~~~~~~~~~-iv~E~~~gg~L~~~i~~  106 (293)
T d1jksa_          77 TLH-EVYENKTDVI-LILELVAGGELFDFLAE  106 (293)
T ss_dssp             CEE-EEEECSSEEE-EEEECCCSCBHHHHHHH
T ss_pred             cEE-EEEEECCEEE-EEEEcCCCccccchhcc
Confidence            999 9999888888 99999999999999864

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=2.4e-15  Score=130.05  Aligned_cols=101  Identities=17%  Similarity=0.132  Sum_probs=82.5

Q ss_pred             cCccccceecccCccceeccccccccccccceeecCC-----CcEEEEEEccCCCCchhH--HHHHHHHhhhCCCCccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARID-----ARVVAARIVFAGSVTGIF--FARSVTEVAKIYARSRPR  228 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~-----~~~vAvK~l~~~~~~~~~--f~~e~~~l~~l~H~nlv~  228 (282)
                      +.|+..+.||+|+||.||+             |.+..     ...||||+++........  |.+|+.+|.+++|||||+
T Consensus         7 ~~~~~~~~iG~G~fG~Vy~-------------~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~   73 (283)
T d1mqba_           7 SCVTRQKVIGAGEFGEVYK-------------GMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIR   73 (283)
T ss_dssp             TTEEEEEEEEECSSSEEEE-------------EEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCC
T ss_pred             HHeEeeeEEeeCCCeEEEE-------------EEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEee
Confidence            4577789999999999999             76543     247999999765444333  999999999999999999


Q ss_pred             eccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcccc
Q 043820          229 SYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPAQ  273 (282)
Q Consensus       229 l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~~  273 (282)
                      ++ |++.+.+..+ +||||+.+|+|.+++....  ..++|.++++
T Consensus        74 ~~-g~~~~~~~~~-~v~e~~~~~~l~~~~~~~~--~~~~~~~~~~  114 (283)
T d1mqba_          74 LE-GVISKYKPMM-IITEYMENGALDKFLREKD--GEFSVLQLVG  114 (283)
T ss_dssp             EE-EEECSSSSEE-EEEECCTTEEHHHHHHHTT--TCSCHHHHHH
T ss_pred             ee-EEEecCCceE-EEEEecccCcchhhhhccc--ccccHHHHHH
Confidence            99 9999988888 9999999999999876543  3577776653

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=4.8e-15  Score=129.96  Aligned_cols=95  Identities=16%  Similarity=0.159  Sum_probs=75.3

Q ss_pred             cceecccCccceeccccccccccccceeecCC----CcEEEEEEccCCCCc-hhH-HHHHHHHhhhCCCCccceeccceE
Q 043820          161 NNKLGEGGFGPVYKVVAAGICFAGTITGARID----ARVVAARIVFAGSVT-GIF-FARSVTEVAKIYARSRPRSYPSVV  234 (282)
Q Consensus       161 ~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~----~~~vAvK~l~~~~~~-~~~-f~~e~~~l~~l~H~nlv~l~~g~~  234 (282)
                      .++||+|+||+||+             |.+.+    ...||||+++..... ..+ |.+|+.+|++++|||||+++ |+|
T Consensus        32 ~~~iG~G~fg~Vyk-------------~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~-g~~   97 (311)
T d1r0pa_          32 NEVIGRGHFGCVYH-------------GTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL-GIC   97 (311)
T ss_dssp             EEEEEEETTEEEEE-------------EEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCC-EEE
T ss_pred             ceEEeecCCeEEEE-------------EEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEe-EEE
Confidence            37899999999999             87643    236899999754333 334 99999999999999999999 998


Q ss_pred             eeCC-eEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          235 IRPG-YKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       235 ~~~~-~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      ...+ ..+ +||||+++|+|.+++....  ..++|..++
T Consensus        98 ~~~~~~~~-lv~E~~~~g~l~~~~~~~~--~~~~~~~~~  133 (311)
T d1r0pa_          98 LRSEGSPL-VVLPYMKHGDLRNFIRNET--HNPTVKDLI  133 (311)
T ss_dssp             EETTTEEE-EEEECCTTCBHHHHHHCTT--CCCBHHHHH
T ss_pred             EecCCceE-EEEEEeecCchhhhhcccc--ccchHHHHH
Confidence            8754 566 9999999999999987654  245555554

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=5.7e-15  Score=126.90  Aligned_cols=89  Identities=17%  Similarity=0.230  Sum_probs=73.7

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch--hH-HHHHHHHhhhCCCCccceecc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG--IF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      ++|...+.||+|+||.||+             +... +|..||+|.+.......  .+ |.+|+.+|.+++|||||+++ 
T Consensus         4 edy~~~~~iG~G~fg~Vy~-------------~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~-   69 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQK-------------IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY-   69 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEE-------------EEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEE-
T ss_pred             hhCEEeEEEecCCCeEEEE-------------EEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEE-
Confidence            5688889999999999999             7654 68899999997654333  23 99999999999999999999 


Q ss_pred             ceEeeC--CeEEEEEEecCCCCCccccccC
Q 043820          232 SVVIRP--GYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       232 g~~~~~--~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +++.+.  +..+ +||||+++|+|.+++..
T Consensus        70 ~~~~~~~~~~~~-ivmEy~~~g~L~~~i~~   98 (269)
T d2java1          70 DRIIDRTNTTLY-IVMEYCEGGDLASVITK   98 (269)
T ss_dssp             EEEEC----CEE-EEEECCTTEEHHHHHHH
T ss_pred             EEEEeCCCCEEE-EEEecCCCCcHHHHHHh
Confidence            988653  3455 99999999999999864

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=2.5e-15  Score=131.66  Aligned_cols=101  Identities=16%  Similarity=0.088  Sum_probs=80.6

Q ss_pred             HHHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH--HHHHHHHhhhC-CCCccc
Q 043820          151 IANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF--FARSVTEVAKI-YARSRP  227 (282)
Q Consensus       151 l~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~--f~~e~~~l~~l-~H~nlv  227 (282)
                      ++...++|.+.+.||+|+||.||++...+.       .....+..||||+++........  |.+|+.++.++ +|||||
T Consensus        18 ~~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~-------~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv   90 (311)
T d1t46a_          18 WEFPRNRLSFGKTLGAGAFGKVVEATAYGL-------IKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV   90 (311)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESS-------SSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             ccCCHHHeEEeeEEeecCCeEEEEEEEecc-------ccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEE
Confidence            445567888889999999999999322211       01234678999999765544443  99999999999 799999


Q ss_pred             eeccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          228 RSYPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       228 ~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +++ |+|.+++..+ +||||+++|+|.++|+..
T Consensus        91 ~~~-g~~~~~~~~~-lvmE~~~~g~l~~~l~~~  121 (311)
T d1t46a_          91 NLL-GACTIGGPTL-VITEYCCYGDLLNFLRRK  121 (311)
T ss_dssp             CEE-EEECSSSSCE-EEEECCTTEEHHHHHHHT
T ss_pred             EEE-EEEeeCCEEE-EEEEcCCCCCHHHHHHhc
Confidence            999 9999988888 999999999999999753

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=3.2e-15  Score=131.81  Aligned_cols=101  Identities=17%  Similarity=0.124  Sum_probs=76.4

Q ss_pred             HHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCch-hH-HHHHHHHhhhC-CCCccce
Q 043820          152 ANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTG-IF-FARSVTEVAKI-YARSRPR  228 (282)
Q Consensus       152 ~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l-~H~nlv~  228 (282)
                      +...++|...+.||+|+||.||++...+.       +.......||+|.+....... .. |.+|+.+|.++ +|||||+
T Consensus        33 ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~-------~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~  105 (325)
T d1rjba_          33 EFPRENLEFGKVLGSGAFGKVMNATAYGI-------SKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVN  105 (325)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESC-------SSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cCCHHHeEEeeEEeeCCCeEEEEEEEcCC-------CcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeE
Confidence            34556788889999999999999322211       011123479999986543332 33 99999999998 8999999


Q ss_pred             eccceEeeCCeEEEEEEecCCCCCccccccCCC
Q 043820          229 SYPSVVIRPGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       229 l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      ++ |++.+.+..+ +||||+++|+|.++|....
T Consensus       106 l~-~~~~~~~~~~-lv~Ey~~~g~L~~~l~~~~  136 (325)
T d1rjba_         106 LL-GACTLSGPIY-LIFEYCCYGDLLNYLRSKR  136 (325)
T ss_dssp             EE-EEECSSSSCE-EEEECCTTCBHHHHHHTTT
T ss_pred             EE-EEEeeCCeEE-EEEEcCCCCcHHHHHHhcc
Confidence            99 9999999888 9999999999999997643

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=1.5e-14  Score=127.32  Aligned_cols=89  Identities=18%  Similarity=0.167  Sum_probs=77.0

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      +.|...+.||+|+||.||+             +... ++..||+|.++... .... +.+|+.+|..++|||||+++ ++
T Consensus         5 ~rY~i~~~lG~G~fg~Vy~-------------~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~-~~   69 (321)
T d1tkia_           5 EKYMIAEDLGRGEFGIVHR-------------CVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLH-ES   69 (321)
T ss_dssp             TTEEEEEEEEECSSEEEEE-------------EEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEE-EE
T ss_pred             cceEEEEEEecCCCeEEEE-------------EEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEE-EE
Confidence            4678889999999999999             7754 57899999997543 2333 99999999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccCC
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ..+.+..+ |||||+++|+|.++|...
T Consensus        70 ~~~~~~~~-lvmE~~~gg~L~~~i~~~   95 (321)
T d1tkia_          70 FESMEELV-MIFEFISGLDIFERINTS   95 (321)
T ss_dssp             EEETTEEE-EEECCCCCCBHHHHHTSS
T ss_pred             EEECCEEE-EEEecCCCCcHHHHHHhc
Confidence            99888888 999999999999999654

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.49  E-value=1.6e-14  Score=128.65  Aligned_cols=90  Identities=18%  Similarity=0.184  Sum_probs=78.1

Q ss_pred             cCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      +.|...+.||+|+||.||+             +.. .+|..||+|.++.......+ +.+|+.+|.+++|||||+++ ++
T Consensus        29 d~Y~i~~~lG~G~fg~V~~-------------a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~-~~   94 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHR-------------CVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLH-DA   94 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEE-------------EEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEE-EE
T ss_pred             cceEEEEEEecCCCeEEEE-------------EEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEE-EE
Confidence            4688889999999999999             764 46899999999765444445 99999999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCccccccCC
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +.+.+..+ |||||+++|+|.+++...
T Consensus        95 ~~~~~~~~-ivmE~~~gg~L~~~~~~~  120 (352)
T d1koba_          95 FEDKYEMV-LILEFLSGGELFDRIAAE  120 (352)
T ss_dssp             EECSSEEE-EEEECCCCCBHHHHTTCT
T ss_pred             EEECCEEE-EEEEcCCCChHHHHHHhc
Confidence            98888888 999999999999887654

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=7.8e-15  Score=125.61  Aligned_cols=89  Identities=22%  Similarity=0.306  Sum_probs=76.2

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhCCCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ++|...+.||+|+||.||+             +... ++..||+|.+....   ....+ +.+|+.+|..++|||||+++
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~-------------~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~   72 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYL-------------AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY   72 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEE-------------EEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred             hHeEEEEEEecCCCcEEEE-------------EEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEE
Confidence            4578889999999999999             7754 58899999986432   22233 99999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                       +++.+.+..+ +||||+++|+|.++|..
T Consensus        73 -~~~~~~~~~~-ivmEy~~~g~L~~~l~~   99 (263)
T d2j4za1          73 -GYFHDATRVY-LILEYAPLGTVYRELQK   99 (263)
T ss_dssp             -EEEECSSEEE-EEEECCTTCBHHHHHHH
T ss_pred             -EEEEECCEEE-EEEeecCCCcHHHHHhh
Confidence             9999888888 99999999999999864

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.48  E-value=7.6e-15  Score=128.58  Aligned_cols=97  Identities=20%  Similarity=0.203  Sum_probs=79.4

Q ss_pred             CccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCchh---H-HHHHHHHhhhCCCCccceecc
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVTGI---F-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~~~---~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      .|+..+.||+|+||.||+             +.. .++..||||.++.......   + |.+|+.+|.+++|||||+++ 
T Consensus        16 ~y~~l~~lG~G~fg~Vy~-------------a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~-   81 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYF-------------ARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR-   81 (309)
T ss_dssp             HEEEEEEEEECSSSEEEE-------------EEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEE-
T ss_pred             hcEeeEEEecCCCeEEEE-------------EEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEE-
Confidence            478889999999999999             764 4688999999976543332   3 89999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCcc
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDP  271 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R  271 (282)
                      |++.+++..+ +||||+++|+|..++....   .++|...
T Consensus        82 ~~~~~~~~~~-iv~E~~~~g~l~~~~~~~~---~l~e~~~  117 (309)
T d1u5ra_          82 GCYLREHTAW-LVMEYCLGSASDLLEVHKK---PLQEVEI  117 (309)
T ss_dssp             EEEEETTEEE-EEEECCSEEHHHHHHHHTS---CCCHHHH
T ss_pred             EEEEECCEEE-EEEEecCCCchHHHHHhCC---CCCHHHH
Confidence            9999998888 9999999999987665432   4565543

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=7.3e-15  Score=128.26  Aligned_cols=97  Identities=10%  Similarity=0.120  Sum_probs=74.5

Q ss_pred             CccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccceEe
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSVVI  235 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~~~  235 (282)
                      ++.+.+.||+|+||.||+             |.. +|..||||+++.... ... +..|+..+..++|||||+++ |+|.
T Consensus         4 ~~~l~~~iG~G~fg~Vy~-------------~~~-~g~~vAvK~~~~~~~-~~~~~e~ei~~~~~~~HpnIv~~~-~~~~   67 (303)
T d1vjya_           4 TIVLQESIGKGRFGEVWR-------------GKW-RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFI-AADN   67 (303)
T ss_dssp             GEEEEEEEECCSSSEEEE-------------EEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEE-EEEE
T ss_pred             EEEEEEEEeeCCCeEEEE-------------EEE-CCEEEEEEEECccch-hHHHHHHHHHHHhhCCCCcCcceE-EEEE
Confidence            455668999999999999             876 578999999864321 111 45556666788999999999 9998


Q ss_pred             eCC---eEEEEEEecCCCCCccccccCCCCCcCCCCCcccc
Q 043820          236 RPG---YKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPAQ  273 (282)
Q Consensus       236 ~~~---~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~~  273 (282)
                      ..+   ..+++|||||++|+|.++|...    .++|..|++
T Consensus        68 ~~~~~~~~~~lv~Ey~~~g~L~~~l~~~----~l~~~~~~~  104 (303)
T d1vjya_          68 KDNGTWTQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIK  104 (303)
T ss_dssp             EECSSSEEEEEEEECCTTCBHHHHHHHC----CBCHHHHHH
T ss_pred             eCCCcceEEEEEEecccCCCHHHHHhcC----CCCHHHHHH
Confidence            654   2334999999999999999753    488887763

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=3.5e-14  Score=121.95  Aligned_cols=87  Identities=18%  Similarity=0.134  Sum_probs=70.2

Q ss_pred             cccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCc--hhH-HHHHHHHhhhCCCCccceeccceE
Q 043820          159 SINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVT--GIF-FARSVTEVAKIYARSRPRSYPSVV  234 (282)
Q Consensus       159 ~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~--~~~-f~~e~~~l~~l~H~nlv~l~~g~~  234 (282)
                      ...++||+|+||.||+             +... ++..||+|.+......  ..+ |.+|+.+|++++|||||+++ |++
T Consensus        12 ~~~~~iG~G~fg~Vy~-------------~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~-~~~   77 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYK-------------GLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFY-DSW   77 (270)
T ss_dssp             EEEEEEEECSSEEEEE-------------EEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEE-EEE
T ss_pred             EeeeEEecCcCcEEEE-------------EEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEE-EEE
Confidence            4457899999999999             7754 5789999998654322  233 99999999999999999999 987


Q ss_pred             ee---CCeEEEEEEecCCCCCccccccC
Q 043820          235 IR---PGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       235 ~~---~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ..   ++..+++||||+++|+|.++|..
T Consensus        78 ~~~~~~~~~~~ivmE~~~~g~L~~~l~~  105 (270)
T d1t4ha_          78 ESTVKGKKCIVLVTELMTSGTLKTYLKR  105 (270)
T ss_dssp             EEESSSCEEEEEEEECCCSCBHHHHHHH
T ss_pred             eeccccCCEEEEEEeCCCCCcHHHHHhc
Confidence            54   23334499999999999999864

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=1.3e-14  Score=125.93  Aligned_cols=90  Identities=14%  Similarity=0.121  Sum_probs=76.3

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhCCCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ++|...+.||+|+||.||+             +... ++..||||.+....   ....+ +.+|+.+|++++|||||+++
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~-------------a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~   74 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVL-------------ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY   74 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEE-------------EEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEE
T ss_pred             CCCEEEEEEeeCCCeEEEE-------------EEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEE
Confidence            4688889999999999999             7654 68999999986432   12234 99999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                       +++.+.+..+ +||||+++|+|.+++...
T Consensus        75 -~~~~~~~~~~-ivmEy~~gg~L~~~~~~~  102 (288)
T d1uu3a_          75 -FTFQDDEKLY-FGLSYAKNGELLKYIRKI  102 (288)
T ss_dssp             -EEEECSSEEE-EEECCCTTEEHHHHHHHH
T ss_pred             -EEEEECCEEE-EEEEccCCCCHHHhhhcc
Confidence             9998888888 999999999999988643

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=7.6e-15  Score=126.12  Aligned_cols=101  Identities=17%  Similarity=0.162  Sum_probs=79.6

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecC----CCcEEEEEEccCCCCchh-H-HHHHHHHhhhCCCCccc
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI----DARVVAARIVFAGSVTGI-F-FARSVTEVAKIYARSRP  227 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~----~~~~vAvK~l~~~~~~~~-~-f~~e~~~l~~l~H~nlv  227 (282)
                      ..++|.+.+.||+|+||.||+             |...    .+..||+|.++....... + |.+|+.+|++++|||||
T Consensus         5 ~~~~~~l~~~iG~G~fg~Vy~-------------a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv   71 (273)
T d1mp8a_           5 QRERIELGRCIGEGQFGDVHQ-------------GIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV   71 (273)
T ss_dssp             CGGGEEEEEEEEECSSSEEEE-------------EEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBC
T ss_pred             CHHHeEEEEEEeeCCCcEEEE-------------EEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEe
Confidence            346788889999999999999             7643    245799999875444443 3 99999999999999999


Q ss_pred             eeccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          228 RSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       228 ~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      +++ |++. .+..+ +||||+++|+|.+++....  ..++|..++
T Consensus        72 ~l~-~~~~-~~~~~-iv~E~~~~g~l~~~~~~~~--~~l~~~~~~  111 (273)
T d1mp8a_          72 KLI-GVIT-ENPVW-IIMELCTLGELRSFLQVRK--YSLDLASLI  111 (273)
T ss_dssp             CEE-EEEC-SSSCE-EEEECCTTEEHHHHHHHTT--TTSCHHHHH
T ss_pred             eEE-EEEe-cCeEE-EEEEeccCCcHHhhhhccC--CCCCHHHHH
Confidence            999 9885 45567 9999999999999876543  246666554

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.42  E-value=7.8e-14  Score=120.16  Aligned_cols=97  Identities=12%  Similarity=0.044  Sum_probs=79.3

Q ss_pred             cCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCc---------hhH-HHHHHHHhhhCC-C
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVT---------GIF-FARSVTEVAKIY-A  223 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~---------~~~-f~~e~~~l~~l~-H  223 (282)
                      ++|...+.||+|+||+||+             +.. .++..||||+++.....         ..+ +.+|+.+|.+++ |
T Consensus         3 ~~y~~~~~iG~G~~g~V~~-------------~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h   69 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRR-------------CIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGH   69 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEE-------------EEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             ccCEEceEEecCcCeEEEE-------------EEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            4688889999999999999             764 46889999998653221         123 889999999996 9


Q ss_pred             CccceeccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCc
Q 043820          224 RSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPD  270 (282)
Q Consensus       224 ~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~  270 (282)
                      ||||+++ +++.+++..+ |||||+++|+|.++|....   .+++.+
T Consensus        70 pnIv~~~-~~~~~~~~~~-ivmE~~~~g~L~~~l~~~~---~l~e~~  111 (277)
T d1phka_          70 PNIIQLK-DTYETNTFFF-LVFDLMKKGELFDYLTEKV---TLSEKE  111 (277)
T ss_dssp             TTBCCEE-EEEECSSEEE-EEEECCTTCBHHHHHHHHS---SCCHHH
T ss_pred             CCeEEEE-eecccCcceE-EEEEcCCCchHHHHHHhcC---CCCHHH
Confidence            9999999 9999888888 9999999999999996433   355543

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=5.1e-14  Score=122.31  Aligned_cols=107  Identities=18%  Similarity=0.239  Sum_probs=77.4

Q ss_pred             cCHHHHHHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchh-H-HHHHHHHhhhC-C
Q 043820          146 FELATIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGI-F-FARSVTEVAKI-Y  222 (282)
Q Consensus       146 ~~~~el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~-~-f~~e~~~l~~l-~  222 (282)
                      ++.++++...++|...++||+|+||.||++...+.       .....++.||||.++....... + |.+|...+.++ +
T Consensus         3 ~~~~~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~-------~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~   75 (299)
T d1ywna1           3 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGI-------DKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH   75 (299)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSCEEEEEEEEST-------TSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCC
T ss_pred             CCCccccccHHHEEEeeEEeecCCeEEEEEEEcCC-------CcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcC
Confidence            34556666677899999999999999999322211       1122357899999976444333 3 88888888777 7


Q ss_pred             CCccceeccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          223 ARSRPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       223 H~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      |+|||++. +++...+..+++||||+++|+|.++|...
T Consensus        76 h~~iv~~~-~~~~~~~~~~~iv~E~~~~g~L~~~l~~~  112 (299)
T d1ywna1          76 HLNVVNLL-GACTKPGGPLMVIVEFCKFGNLSTYLRSK  112 (299)
T ss_dssp             CTTBCCEE-EEECSTTSCCEEEEECCTTCBHHHHHHHT
T ss_pred             CCeEEEee-eeeccCCCeEEEEEEecCCCcHHHHHHhc
Confidence            89999999 98877654433999999999999999753

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=3.9e-14  Score=123.29  Aligned_cols=101  Identities=16%  Similarity=0.155  Sum_probs=73.0

Q ss_pred             hccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchh-H-HHHHHHHhhhC-CCCccceec
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGI-F-FARSVTEVAKI-YARSRPRSY  230 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~-~-f~~e~~~l~~l-~H~nlv~l~  230 (282)
                      ..++|...+.||+|+||.||++...+...     ....++..||||+++....... . +.+|...+.++ +|||||+++
T Consensus        11 ~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~-----~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~   85 (299)
T d1fgka_          11 PRDRLVLGKPLGEGAFGQVVLAEAIGLDK-----DKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLL   85 (299)
T ss_dssp             CGGGEEEEEECC-----CEEEEEEECC---------CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             cHHHeEEeeEEeecCCcEEEEEEEcCCCc-----ccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecc
Confidence            45577888999999999999943332200     0112346899999976554443 3 99999999888 899999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCCC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                       |+|.+.+..+ +||||+++|+|.++|....
T Consensus        86 -~~~~~~~~~~-~v~e~~~~g~l~~~i~~~~  114 (299)
T d1fgka_          86 -GACTQDGPLY-VIVEYASKGNLREYLQARR  114 (299)
T ss_dssp             -EEECSSSSCE-EEECCCTTCBHHHHHHTTS
T ss_pred             -cccccCCeEE-EEEEccCCCcHHHHHHhhc
Confidence             9999988888 9999999999999997543

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.40  E-value=6.9e-14  Score=122.75  Aligned_cols=91  Identities=14%  Similarity=0.105  Sum_probs=77.0

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhCCCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ++|...+.||+|+||.||+             +... +|..||||+++...   ....+ +.+|+.+|+.++|||||+++
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~-------------a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~   70 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHL-------------IRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMW   70 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEE-------------EEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEE
T ss_pred             hHeEEEEEEecCcCcEEEE-------------EEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhhee
Confidence            4688889999999999999             7754 58999999986432   22234 99999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCCC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                       +++.+.+..+ +||||+++|+|..++....
T Consensus        71 -~~~~~~~~~~-ivmE~~~gg~l~~~~~~~~   99 (316)
T d1fota_          71 -GTFQDAQQIF-MIMDYIEGGELFSLLRKSQ   99 (316)
T ss_dssp             -EEEECSSEEE-EEECCCCSCBHHHHHHHTS
T ss_pred             -eeEeeCCeee-eEeeecCCccccccccccc
Confidence             9999888888 9999999999998886543

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=9.1e-14  Score=123.04  Aligned_cols=90  Identities=12%  Similarity=0.052  Sum_probs=76.9

Q ss_pred             cCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCC---CchhH-HHHHHHHhhhCCCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGS---VTGIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ++|...+.||+|+||.||+             +.. .++..||+|.++...   ....+ +.+|+.+|+.++|||||+++
T Consensus         5 ~dy~~~~~lG~G~fg~V~~-------------~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~   71 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVIL-------------VREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK   71 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEE-------------EEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEE
T ss_pred             HhcEEEEEEecCcCeEEEE-------------EEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence            5688889999999999999             764 468999999996432   22234 89999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                       +++.+.+..+ +||||+++|+|.+++...
T Consensus        72 -~~~~~~~~~~-iv~ey~~gg~L~~~~~~~   99 (337)
T d1o6la_          72 -YAFQTHDRLC-FVMEYANGGELFFHLSRE   99 (337)
T ss_dssp             -EEEECSSEEE-EEEECCTTCBHHHHHHHH
T ss_pred             -eeeccccccc-cceeccCCCchhhhhhcc
Confidence             9999888888 999999999999988643

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=3.3e-14  Score=122.27  Aligned_cols=99  Identities=21%  Similarity=0.254  Sum_probs=70.6

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC--C--CcEEEEEEccCCC---CchhH-HHHHHHHhhhCCCCccc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI--D--ARVVAARIVFAGS---VTGIF-FARSVTEVAKIYARSRP  227 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~--~--~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~H~nlv  227 (282)
                      ++|+..+.||+|+||.||+             |...  .  ...||||++....   ....+ |.+|+.+|.+++|||||
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~-------------~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv   74 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRR-------------GEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI   74 (273)
T ss_dssp             GGEEEEEECC----CCCEE-------------EEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             HHeEEEEEEecCCCeEEEE-------------EEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEE
Confidence            4577789999999999999             7642  2  3478999987532   22234 99999999999999999


Q ss_pred             eeccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          228 RSYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       228 ~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      +++ |++.+ +..+ +||||+++|+|.+++....  ..++|..++
T Consensus        75 ~~~-g~~~~-~~~~-lv~e~~~~~~l~~~~~~~~--~~l~~~~~~  114 (273)
T d1u46a_          75 RLY-GVVLT-PPMK-MVTELAPLGSLLDRLRKHQ--GHFLLGTLS  114 (273)
T ss_dssp             CEE-EEECS-SSCE-EEEECCTTCBHHHHHHHHG--GGSCHHHHH
T ss_pred             EEE-EEEee-cchh-eeeeeecCcchhhhhhccc--CCCCHHHHH
Confidence            999 99965 4556 9999999999999886533  346776654

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=1e-13  Score=121.57  Aligned_cols=99  Identities=19%  Similarity=0.143  Sum_probs=76.4

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CC----cEEEEEEccCCC-CchhH-HHHHHHHhhhCCCCccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DA----RVVAARIVFAGS-VTGIF-FARSVTEVAKIYARSRPR  228 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~----~~vAvK~l~~~~-~~~~~-f~~e~~~l~~l~H~nlv~  228 (282)
                      .+|+..+.||+|+||.||+             |... +|    ..||+|.+.... ....+ |.+|+.+|.+++|||||+
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~-------------~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~   75 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYK-------------GLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR   75 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEE-------------EEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCC
T ss_pred             HHCEEeeEEecCCCeEEEE-------------EEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEee
Confidence            3588889999999999999             7643 33    368999986533 33445 999999999999999999


Q ss_pred             eccceEeeCCeEEEEEEecCCCCCccccccCCCCCcCCCCCccc
Q 043820          229 SYPSVVIRPGYKVGLILELKPDPDPNPDRLHSSRVRSLQYPDPA  272 (282)
Q Consensus       229 l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~~R~  272 (282)
                      ++ |+|.++ ..+ +++||+.+|+|.+++....  ..++|..++
T Consensus        76 l~-g~~~~~-~~~-~v~e~~~~~~l~~~~~~~~--~~~~~~~~~  114 (317)
T d1xkka_          76 LL-GICLTS-TVQ-LITQLMPFGCLLDYVREHK--DNIGSQYLL  114 (317)
T ss_dssp             EE-EEEESS-SEE-EEEECCTTCBHHHHHHHTS--SSCCHHHHH
T ss_pred             EE-EEEecC-Cee-EEEEeccCCcccccccccc--cCCCHHHHH
Confidence            99 999865 455 8899999999999887543  356776554

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=1.4e-13  Score=120.99  Aligned_cols=89  Identities=11%  Similarity=0.100  Sum_probs=73.4

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhh-hCCCCcccee
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVA-KIYARSRPRS  229 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~-~l~H~nlv~l  229 (282)
                      ++|...+.||+|+||.||+             +... +++.||||+++...   ....+ +..|..++. .++|||||++
T Consensus         2 ddy~i~~~iG~G~fg~Vy~-------------~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~   68 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFL-------------AEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHM   68 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEE-------------EEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred             CCeEEeeEEecCCCcEEEE-------------EEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEE
Confidence            5688889999999999999             7654 58999999996432   12223 677777665 6899999999


Q ss_pred             ccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          230 YPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       230 ~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      + +++.+++..+ +||||+++|+|.++|..
T Consensus        69 ~-~~~~~~~~~y-ivmEy~~~g~L~~~i~~   96 (320)
T d1xjda_          69 F-CTFQTKENLF-FVMEYLNGGDLMYHIQS   96 (320)
T ss_dssp             E-EEEECSSEEE-EEEECCTTCBHHHHHHH
T ss_pred             E-EEEccCCcee-EEEeecCCCcHHHHhhc
Confidence            9 9999998888 99999999999999864

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.38  E-value=2e-13  Score=117.24  Aligned_cols=97  Identities=15%  Similarity=0.123  Sum_probs=76.6

Q ss_pred             cCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCch---hH-HHHHHHHhhhCCCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVTG---IF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~~---~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      +.|...+.||+|+||.||+             +.. .+++.||+|.++......   .. |.+|+.+|..++|||||+++
T Consensus         7 drY~i~~~lG~G~fg~Vy~-------------a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~   73 (277)
T d1o6ya_           7 DRYELGEILGFGGMSEVHL-------------ARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY   73 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEE-------------EEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred             ceeEEeEEEeeCCCeEEEE-------------EEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCccc
Confidence            4588889999999999999             764 468999999997543322   23 99999999999999999999


Q ss_pred             cceEeeCCe---EEEEEEecCCCCCccccccCCCCCcCCCCC
Q 043820          231 PSVVIRPGY---KVGLILELKPDPDPNPDRLHSSRVRSLQYP  269 (282)
Q Consensus       231 ~g~~~~~~~---~~~lv~Ey~~~GsL~~~l~~~~~~~~l~W~  269 (282)
                       +++...+.   .++|||||+++|+|.+++....   .++|.
T Consensus        74 -~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~~~~---~l~~~  111 (277)
T d1o6ya_          74 -DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPK  111 (277)
T ss_dssp             -EEEEEECSSSEEEEEEEECCCEEEHHHHHHHHC---SCCHH
T ss_pred             -ceeeeccCCCceEEEEEECCCCCEehhhhcccC---CCCHH
Confidence             98865432   2339999999999999886433   35554

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.33  E-value=4.7e-13  Score=115.32  Aligned_cols=90  Identities=17%  Similarity=0.178  Sum_probs=76.6

Q ss_pred             cCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCch--hH-HHHHHHHhhhCCCCccceeccc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTG--IF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      ++|...++||+|+||+||+             +..+++..||||.+.......  .+ |.+|+.+|.+++|||||+++ +
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~-------------~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~-~   67 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYK-------------AQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY-D   67 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEE-------------EEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEE-E
T ss_pred             CCceeccEEecCCCcEEEE-------------EEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeee-e
Confidence            4677889999999999999             887788999999996543222  34 99999999999999999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      .+...+..+ +++||+.++.+..+....
T Consensus        68 ~~~~~~~~~-i~~e~~~~~~~~~~~~~~   94 (286)
T d1ob3a_          68 VIHTKKRLV-LVFEHLDQDLKKLLDVCE   94 (286)
T ss_dssp             EEECSSCEE-EEEECCSEEHHHHHHTST
T ss_pred             ecccCCcee-EEEEeehhhhHHHHHhhc
Confidence            999999988 999999988777776543

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.32  E-value=4.2e-13  Score=119.90  Aligned_cols=89  Identities=19%  Similarity=0.226  Sum_probs=72.6

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCC---chhH-HHHH---HHHhhhCCCCccc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSV---TGIF-FARS---VTEVAKIYARSRP  227 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~---~~~~-f~~e---~~~l~~l~H~nlv  227 (282)
                      ++|...+.||+|+||.||+             +... +|..||+|.+.....   .... +.+|   +.++..++|||||
T Consensus         4 ddy~i~~~lG~G~fg~Vy~-------------~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv   70 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYG-------------CRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV   70 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEE-------------EEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBC
T ss_pred             HhCeeeeEEecCCCeEEEE-------------EEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEE
Confidence            5788889999999999999             7754 589999999864221   1222 4444   6777888999999


Q ss_pred             eeccceEeeCCeEEEEEEecCCCCCccccccC
Q 043820          228 RSYPSVVIRPGYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       228 ~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      +++ +++...+..+ +||||+++|+|.++|..
T Consensus        71 ~l~-~~~~~~~~~~-ivmE~~~gg~L~~~l~~  100 (364)
T d1omwa3          71 CMS-YAFHTPDKLS-FILDLMNGGDLHYHLSQ  100 (364)
T ss_dssp             CEE-EEEECSSEEE-EEECCCCSCBHHHHHHH
T ss_pred             EEE-EEEEECCEEE-EEEEecCCCcHHHHHHh
Confidence            999 9998888888 99999999999999864

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=8.8e-13  Score=114.40  Aligned_cols=85  Identities=21%  Similarity=0.266  Sum_probs=69.6

Q ss_pred             cCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCc--hhH-HHHHHHHhhhCCCCccceecc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVT--GIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~--~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      ++|...+.||+|+||.||+             +.. .+++.||+|.++.....  ..+ +.+|+.+|.+++|||||+++ 
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~-------------~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~-   67 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYK-------------ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL-   67 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEE-------------EEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEE-
T ss_pred             CCCEeccEEecCcCeEEEE-------------EEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEec-
Confidence            5788889999999999999             775 46899999999654322  233 99999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccc
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNP  255 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~  255 (282)
                      +++.+++..+ +||||+.++.+..
T Consensus        68 ~~~~~~~~~~-iv~e~~~~~~~~~   90 (298)
T d1gz8a_          68 DVIHTENKLY-LVFEFLHQDLKKF   90 (298)
T ss_dssp             EEEEETTEEE-EEEECCSEEHHHH
T ss_pred             ccccccccee-EEEeecCCchhhh
Confidence            9999999988 9999998654443

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.29  E-value=8.4e-13  Score=117.30  Aligned_cols=90  Identities=13%  Similarity=0.048  Sum_probs=76.4

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCC---CchhH-HHHHHHHhhhCCCCccceec
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGS---VTGIF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~---~~~~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ++|...+.||+|+||.||+             +... +|..||||++....   ....+ +.+|+.+|..++|||||+++
T Consensus        41 d~y~i~~~lG~G~fg~Vy~-------------a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~  107 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVML-------------VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE  107 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEE-------------EEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred             cCeEEEEEeecCcCcEEEE-------------EEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecc
Confidence            4688889999999999999             7654 68999999986422   12233 89999999999999999999


Q ss_pred             cceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          231 PSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       231 ~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                       +++......+ +||||+.+|+|.+++...
T Consensus       108 -~~~~~~~~~~-~v~e~~~~g~l~~~l~~~  135 (350)
T d1rdqe_         108 -FSFKDNSNLY-MVMEYVAGGEMFSHLRRI  135 (350)
T ss_dssp             -EEEECSSEEE-EEEECCTTCBHHHHHHHH
T ss_pred             -cccccccccc-cccccccccchhhhHhhc
Confidence             9998888888 999999999999998643

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=1.4e-12  Score=112.93  Aligned_cols=83  Identities=16%  Similarity=0.116  Sum_probs=67.3

Q ss_pred             cceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch-----hH-HHHHHHHhhhCCCCccceeccce
Q 043820          161 NNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG-----IF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       161 ~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~-----~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      .++||+|+||+||+             +... +|+.||||+++......     .+ +.+|+.+|.+++|||||+++ ++
T Consensus         3 l~~lG~G~fg~Vy~-------------~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~-~~   68 (299)
T d1ua2a_           3 LDFLGEGQFATVYK-------------ARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLL-DA   68 (299)
T ss_dssp             EEEEEEETTEEEEE-------------EECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEE-EE
T ss_pred             ceEeccCcCeEEEE-------------EEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEE-ee
Confidence            37899999999999             7754 58999999986432211     23 89999999999999999999 99


Q ss_pred             EeeCCeEEEEEEecCCCCCcccccc
Q 043820          234 VIRPGYKVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       234 ~~~~~~~~~lv~Ey~~~GsL~~~l~  258 (282)
                      +...+..+ +||||+++|++...+.
T Consensus        69 ~~~~~~~~-ivmE~~~~~~~~~~~~   92 (299)
T d1ua2a_          69 FGHKSNIS-LVFDFMETDLEVIIKD   92 (299)
T ss_dssp             ECCTTCCE-EEEECCSEEHHHHHTT
T ss_pred             eccCCcee-ehhhhhcchHHhhhhh
Confidence            99999888 9999999988776654

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=3.4e-12  Score=109.74  Aligned_cols=90  Identities=17%  Similarity=0.148  Sum_probs=76.3

Q ss_pred             cCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCc--hhH-HHHHHHHhhhCCCCccceecc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVT--GIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~--~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      +.|...++||+|+||+||+             +.. .++..||||+++.....  ... +.+|+.+|+.++|+|||++. 
T Consensus         2 ~ry~~i~~LG~G~fg~V~~-------------~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~-   67 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFK-------------AKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH-   67 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEE-------------EEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEE-
T ss_pred             CCCEeeeEEecCcCeEEEE-------------EEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeec-
Confidence            4577889999999999999             775 46889999998654322  233 99999999999999999999 


Q ss_pred             ceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          232 SVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       232 g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      +++......+ +++||+.+++|..++...
T Consensus        68 ~~~~~~~~~~-iv~~~~~~~~l~~~~~~~   95 (292)
T d1unla_          68 DVLHSDKKLT-LVFEFCDQDLKKYFDSCN   95 (292)
T ss_dssp             EEEECSSEEE-EEEECCSEEHHHHHHHTT
T ss_pred             ccccccccee-EEeeeccccccccccccc
Confidence            9999999888 999999999998877643

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=4.7e-12  Score=111.68  Aligned_cols=86  Identities=14%  Similarity=0.046  Sum_probs=67.9

Q ss_pred             cCcccc-ceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCchhHHHHHHHHhhhC-CCCccceeccc
Q 043820          156 DNFSIN-NKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVTGIFFARSVTEVAKI-YARSRPRSYPS  232 (282)
Q Consensus       156 ~~f~~~-~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l-~H~nlv~l~~g  232 (282)
                      ++|... +.||+|+||.||+             +.. .++..||||.++..    ..+.+|+.++.++ +|||||+++ +
T Consensus        11 ~~y~i~~~~lG~G~fg~Vy~-------------a~~~~~~~~vAiK~i~~~----~~~~~E~~~~~~~~~hpnIv~l~-~   72 (335)
T d2ozaa1          11 DDYKVTSQVLGLGINGKVLQ-------------IFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHIVRIV-D   72 (335)
T ss_dssp             GTEEEEEEEEEECSSCEEEE-------------EEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTBCCEE-E
T ss_pred             cCEEEeeEEeeeccCeEEEE-------------EEECCCCCEEEEEEECCc----HHHHHHHHHHHHhcCCCCCCeEE-E
Confidence            467665 4699999999999             764 46899999998531    1288999887655 899999999 9


Q ss_pred             eEee----CCeEEEEEEecCCCCCccccccCC
Q 043820          233 VVIR----PGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       233 ~~~~----~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      ++.+    ....+ +||||+++|+|.++|...
T Consensus        73 ~~~~~~~~~~~~~-ivmEy~~gg~L~~~i~~~  103 (335)
T d2ozaa1          73 VYENLYAGRKCLL-IVMECLDGGELFSRIQDR  103 (335)
T ss_dssp             EEEEEETTEEEEE-EEEECCCSEEHHHHHHSC
T ss_pred             EEeecccCCCEEE-EEEECCCCCcHHHHHHhc
Confidence            8754    23345 999999999999999753

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=7.5e-12  Score=110.44  Aligned_cols=90  Identities=12%  Similarity=0.026  Sum_probs=72.8

Q ss_pred             ccCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCch--hH-HHHHHHHhhhCCCCccceec
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVTG--IF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      ++.|...++||+|+||+||+             +.. .+|+.||||+++......  .+ +.+|+.+|..++|+|+|+++
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~-------------a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~   83 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCA-------------AFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL   83 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEE-------------EEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCS
T ss_pred             CCCeEEEEEEecCCCeEEEE-------------EEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEE
Confidence            45688889999999999999             764 468999999997543332  23 89999999999999999999


Q ss_pred             cceEeeC-----CeEEEEEEecCCCCCccccccC
Q 043820          231 PSVVIRP-----GYKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       231 ~g~~~~~-----~~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                       +++...     ...+ +++||+.+|+|.+++..
T Consensus        84 -~~~~~~~~~~~~~~~-~i~~~~~gg~L~~~~~~  115 (348)
T d2gfsa1          84 -DVFTPARSLEEFNDV-YLVTHLMGADLNNIVKC  115 (348)
T ss_dssp             -EEECSCSSTTTCCCC-EEEEECCSEEHHHHHTT
T ss_pred             -EEEeeccccccCceE-EEEEeecCCchhhhccc
Confidence             887543     2345 77888899999999854

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=9.3e-12  Score=110.03  Aligned_cols=89  Identities=12%  Similarity=0.088  Sum_probs=68.6

Q ss_pred             cCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCch-hH-HHHHHHHhhhCCCCccceeccc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVTG-IF-FARSVTEVAKIYARSRPRSYPS  232 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~~-~~-f~~e~~~l~~l~H~nlv~l~~g  232 (282)
                      ..|...++||+|+||+||+             +.. .++..||||++....... .+ +++|+.+|..++|||+++++ +
T Consensus         8 ~rY~~~~~LG~G~fg~Vy~-------------~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~-~   73 (345)
T d1pmea_           8 PRYTNLSYIGEGAYGMVCS-------------AYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN-D   73 (345)
T ss_dssp             TTEEEEEECC---CCCEEE-------------EEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCC-E
T ss_pred             CCeEEEEEEeeccCeEEEE-------------EEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEE-E
Confidence            4578889999999999999             764 468999999997544333 33 99999999999999999999 9


Q ss_pred             eEeeCC----eEEEEEEecCCCCCccccccC
Q 043820          233 VVIRPG----YKVGLILELKPDPDPNPDRLH  259 (282)
Q Consensus       233 ~~~~~~----~~~~lv~Ey~~~GsL~~~l~~  259 (282)
                      ++....    ..+ +++||+.+|+|.+++..
T Consensus        74 ~~~~~~~~~~~~~-~l~~~~~~g~L~~~l~~  103 (345)
T d1pmea_          74 IIRAPTIEQMKDV-YLVTHLMGADLYKLLKT  103 (345)
T ss_dssp             EECCSSTTTCCCE-EEEEECCCEEHHHHHHH
T ss_pred             EEeeccccccceE-EEEEeecCCchhhhhhc
Confidence            986543    234 55677889999999853

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.17  E-value=1.6e-11  Score=107.54  Aligned_cols=84  Identities=17%  Similarity=0.249  Sum_probs=69.8

Q ss_pred             cCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCchhH-HHHHHHHhhhCC-CCccceeccc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVTGIF-FARSVTEVAKIY-ARSRPRSYPS  232 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~-H~nlv~l~~g  232 (282)
                      ++|...++||+|+||+||+             +.. .+++.||+|+++..   ..+ +.+|+.+|..++ ||||++++ +
T Consensus        35 d~y~i~~~LG~G~fg~V~~-------------a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~-~   97 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFE-------------AINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLA-D   97 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEE-------------EEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEE-E
T ss_pred             cCeEEEEEEecCcCeEEEE-------------EEECCCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEE-E
Confidence            4688889999999999999             765 46899999998642   234 999999999995 99999999 9


Q ss_pred             eEeeC--CeEEEEEEecCCCCCccccc
Q 043820          233 VVIRP--GYKVGLILELKPDPDPNPDR  257 (282)
Q Consensus       233 ~~~~~--~~~~~lv~Ey~~~GsL~~~l  257 (282)
                      ++...  ...+ +||||+++|+|..+.
T Consensus        98 ~~~~~~~~~~~-~v~e~~~~~~L~~~~  123 (328)
T d3bqca1          98 IVKDPVSRTPA-LVFEHVNNTDFKQLY  123 (328)
T ss_dssp             EEECTTTCSEE-EEEECCCSCBGGGTT
T ss_pred             EEEecCCCcee-EEEeecCCCcHHHHh
Confidence            87643  3456 999999999998764

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=1.8e-11  Score=108.63  Aligned_cols=85  Identities=14%  Similarity=0.030  Sum_probs=66.2

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCch--hH-HHHHHHHhhhCCCCccceecc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTG--IF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      +.|...++||+|+||+||+             +... +|..||||++.......  .. +.+|+.++.+++|||||+++ 
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~-------------~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~-   82 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCA-------------AYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL-   82 (355)
T ss_dssp             TTEEEEEECSCC--CEEEE-------------EEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCS-
T ss_pred             CCeEEEEEeecCcCeEEEE-------------EEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEE-
Confidence            5688889999999999999             7644 58999999997543332  23 89999999999999999999 


Q ss_pred             ceEeeC------CeEEEEEEecCCCCCccc
Q 043820          232 SVVIRP------GYKVGLILELKPDPDPNP  255 (282)
Q Consensus       232 g~~~~~------~~~~~lv~Ey~~~GsL~~  255 (282)
                      +++...      ...+ +||||+.++.+..
T Consensus        83 ~~f~~~~~~~~~~~~~-iv~Ey~~~~l~~~  111 (355)
T d2b1pa1          83 NVFTPQKTLEEFQDVY-LVMELMDANLCQV  111 (355)
T ss_dssp             EEECSCCSTTTCCEEE-EEEECCSEEHHHH
T ss_pred             EEEecccccccCceeE-EEEeccchHHHHh
Confidence            887643      4556 9999998765543

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=4.2e-12  Score=111.37  Aligned_cols=90  Identities=13%  Similarity=0.104  Sum_probs=74.4

Q ss_pred             cCccccceecccCccceeccccccccccccceeec----CCCcEEEEEEccCCC----CchhH-HHHHHHHhhhCCC-Cc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR----IDARVVAARIVFAGS----VTGIF-FARSVTEVAKIYA-RS  225 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~----~~~~~vAvK~l~~~~----~~~~~-f~~e~~~l~~l~H-~n  225 (282)
                      ++|...+.||+|+||.||+             +..    .+|+.||||.++...    ....+ +.+|+.+|.+++| ||
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~-------------~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pn   90 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFL-------------VRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPF   90 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEE-------------EEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTT
T ss_pred             hceEEEEEEecCCCeEEEE-------------EEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCe
Confidence            5688889999999999999             642    247899999986432    12233 8899999999966 89


Q ss_pred             cceeccceEeeCCeEEEEEEecCCCCCccccccCC
Q 043820          226 RPRSYPSVVIRPGYKVGLILELKPDPDPNPDRLHS  260 (282)
Q Consensus       226 lv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l~~~  260 (282)
                      |+++. +........+ ++|||+.+|+|.+++...
T Consensus        91 Iv~~~-~~~~~~~~~~-~v~e~~~~~~L~~~i~~~  123 (322)
T d1vzoa_          91 LVTLH-YAFQTETKLH-LILDYINGGELFTHLSQR  123 (322)
T ss_dssp             BCCEE-EEEEETTEEE-EEECCCCSCBHHHHHHHH
T ss_pred             EEEee-eeeccCCcee-eeeecccccHHHHHHHhc
Confidence            99999 9988888888 999999999999988643

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=2.1e-11  Score=107.54  Aligned_cols=88  Identities=11%  Similarity=0.070  Sum_probs=64.0

Q ss_pred             ccCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCch--hH-HHHHHHHhhhCCCCccceec
Q 043820          155 TDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVTG--IF-FARSVTEVAKIYARSRPRSY  230 (282)
Q Consensus       155 t~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l~H~nlv~l~  230 (282)
                      .+.|...++||+|+||+||+             +.. .+|+.||||+++......  .+ +.+|+.+|..++|||||+++
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~-------------~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~   83 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCS-------------AVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLL   83 (346)
T ss_dssp             BSSEEEEEEC------CEEE-------------EEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCS
T ss_pred             CCcEEEEEEEecCCCeEEEE-------------EEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEE
Confidence            35688889999999999999             774 358999999997543322  23 89999999999999999999


Q ss_pred             cceEeeCC------eEEEEEEecCCCCCcccccc
Q 043820          231 PSVVIRPG------YKVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       231 ~g~~~~~~------~~~~lv~Ey~~~GsL~~~l~  258 (282)
                       +++...+      ..+ +||||+ +++|..++.
T Consensus        84 -~~~~~~~~~~~~~~~~-lv~e~~-~~~l~~~~~  114 (346)
T d1cm8a_          84 -DVFTPDETLDDFTDFY-LVMPFM-GTDLGKLMK  114 (346)
T ss_dssp             -EEECSCSSTTTCCCCE-EEEECC-SEEHHHHHH
T ss_pred             -EEeccCccccccceEE-EEEecc-cccHHHHHH
Confidence             9987654      346 999999 456666553

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=3e-11  Score=105.27  Aligned_cols=88  Identities=15%  Similarity=0.158  Sum_probs=68.2

Q ss_pred             cCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCc--hhH-HHHHHHHhhhCCCCccceecc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVT--GIF-FARSVTEVAKIYARSRPRSYP  231 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~--~~~-f~~e~~~l~~l~H~nlv~l~~  231 (282)
                      ++|+..++||+|+||+||+             +.. .+|+.||||++......  ..+ +.+|+.+|.+++|+|++++. 
T Consensus        10 ~rY~i~~~LG~G~fg~Vy~-------------a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~-   75 (318)
T d3blha1          10 SKYEKLAKIGQGTFGEVFK-------------ARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI-   75 (318)
T ss_dssp             GGEEEEEEEEECSSSEEEE-------------EEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEE-
T ss_pred             CCEEEEEEEecCcCeEEEE-------------EEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceE-
Confidence            5688889999999999999             775 46899999998643222  223 99999999999999999999 


Q ss_pred             ceEeeC--------CeEEEEEEecCCCCCcccccc
Q 043820          232 SVVIRP--------GYKVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       232 g~~~~~--------~~~~~lv~Ey~~~GsL~~~l~  258 (282)
                      +.+...        ...+ ++|||++++.+..+..
T Consensus        76 ~~~~~~~~~~~~~~~~~~-iv~e~~~~~~~~~~~~  109 (318)
T d3blha1          76 EICRTKASPYNRCKGSIY-LVFDFCEHDLAGLLSN  109 (318)
T ss_dssp             EEEEC----------CEE-EEEECCCEEHHHHHTC
T ss_pred             eeeecccccccccCceEE-EEEeccCCCccchhhh
Confidence            887553        2345 9999999888765543

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=1.5e-11  Score=105.16  Aligned_cols=89  Identities=28%  Similarity=0.292  Sum_probs=72.0

Q ss_pred             cCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCc------hhH-HHHHHHHhhhCC--CCc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVT------GIF-FARSVTEVAKIY--ARS  225 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~------~~~-f~~e~~~l~~l~--H~n  225 (282)
                      +.|...+.||+|+||.||+             +.. .++..||||.+......      ... +.+|+.+|.+++  |||
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~-------------a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~n   70 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYS-------------GIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG   70 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEE-------------EEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCS
T ss_pred             CeEEEeEEEeeCCCeEEEE-------------EEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCC
Confidence            4588889999999999999             765 46899999998643211      123 789999999986  899


Q ss_pred             cceeccceEeeCCeEEEEEEecCCC-CCccccccC
Q 043820          226 RPRSYPSVVIRPGYKVGLILELKPD-PDPNPDRLH  259 (282)
Q Consensus       226 lv~l~~g~~~~~~~~~~lv~Ey~~~-GsL~~~l~~  259 (282)
                      ||+++ +++.+++..+ +||||+.+ +++.+++..
T Consensus        71 Iv~~~-~~~~~~~~~~-lv~e~~~~~~~l~~~~~~  103 (273)
T d1xwsa_          71 VIRLL-DWFERPDSFV-LILERPEPVQDLFDFITE  103 (273)
T ss_dssp             BCCEE-EEEECSSEEE-EEEECCSSEEEHHHHHHH
T ss_pred             ccEEE-EEEeeCCeEE-EEEEeccCcchHHHHHhc
Confidence            99999 9999888888 99999976 577776643

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=1.4e-11  Score=109.14  Aligned_cols=82  Identities=21%  Similarity=0.301  Sum_probs=63.7

Q ss_pred             CccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhHHHHHHHHhhhCCCCccceeccceEe
Q 043820          157 NFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIFFARSVTEVAKIYARSRPRSYPSVVI  235 (282)
Q Consensus       157 ~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H~nlv~l~~g~~~  235 (282)
                      .|...++||+|+||+||+             +... ++..||||++......   +.+|+.+|.+++|+|||+++ +++.
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~-------------a~~~~~~~~vAiK~i~~~~~~---~~~Ei~il~~l~h~niv~~~-~~~~   83 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQ-------------AKLCDSGELVAIKKVLQDKRF---KNRELQIMRKLDHCNIVRLR-YFFY   83 (350)
T ss_dssp             EEEEEEEEEEETTEEEEE-------------EEETTTCCEEEEEEEECCSSS---CCHHHHHHHHCCCTTBCCEE-EEEE
T ss_pred             CcEeeeEEeeCcCeEEEE-------------EEECCCCCEEEEEEECccchH---HHHHHHHHHhcCCCCCCcEE-EEEE
Confidence            355668999999999999             7754 5899999998643211   56899999999999999999 9875


Q ss_pred             eCC------eEEEEEEecCCCCCcccc
Q 043820          236 RPG------YKVGLILELKPDPDPNPD  256 (282)
Q Consensus       236 ~~~------~~~~lv~Ey~~~GsL~~~  256 (282)
                      ...      ..+ |||||+++|.+...
T Consensus        84 ~~~~~~~~~~~~-lv~Ey~~~~~~~~l  109 (350)
T d1q5ka_          84 SSGEKKDEVYLN-LVLDYVPETVYRVA  109 (350)
T ss_dssp             EC--CCSCCEEE-EEEECCSEEHHHHH
T ss_pred             ecCccCCceEEE-EEEeccCCccHHHH
Confidence            432      245 99999997754443

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=8.2e-11  Score=101.70  Aligned_cols=91  Identities=20%  Similarity=0.234  Sum_probs=66.9

Q ss_pred             hccCccccceecccCccceeccccccccccccceeec-CC-CcEEEEEEccCCCCch--hH-HHHHHHHhhhC---CCCc
Q 043820          154 ATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-ID-ARVVAARIVFAGSVTG--IF-FARSVTEVAKI---YARS  225 (282)
Q Consensus       154 at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~-~~~vAvK~l~~~~~~~--~~-f~~e~~~l~~l---~H~n  225 (282)
                      +.++|...++||+|+||.||+             +.. .. +..||||.++......  .. +.+|+.+|+.+   +|||
T Consensus         5 ~~~~Y~i~~~LG~G~fg~V~~-------------a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~Hpn   71 (305)
T d1blxa_           5 ADQQYECVAEIGEGAYGKVFK-------------ARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPN   71 (305)
T ss_dssp             GGGTEEEEEEEEEETTEEEEE-------------EEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTT
T ss_pred             CcCCEEEEEEEecccCeEEEE-------------EEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCC
Confidence            346788889999999999999             764 33 5679999986432222  22 77888776655   8999


Q ss_pred             cceeccceEeeC----CeEEEEEEecCCCCCcccccc
Q 043820          226 RPRSYPSVVIRP----GYKVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       226 lv~l~~g~~~~~----~~~~~lv~Ey~~~GsL~~~l~  258 (282)
                      |++++ +++...    ...++++|||+++|++.....
T Consensus        72 Iv~~~-~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~  107 (305)
T d1blxa_          72 VVRLF-DVCTVSRTDRETKLTLVFEHVDQDLTTYLDK  107 (305)
T ss_dssp             BCCEE-EEEEEEECSSEEEEEEEEECCSCBHHHHHHH
T ss_pred             cceee-eeecccccccCceEEEEEEeccCCchhhhhh
Confidence            99999 988532    223349999999988765543

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=98.95  E-value=5.6e-10  Score=96.12  Aligned_cols=88  Identities=17%  Similarity=0.270  Sum_probs=72.4

Q ss_pred             cCccccceecccCccceeccccccccccccceeecC-CCcEEEEEEccCCCCchhH-HHHHHHHhhhCCC-Cccceeccc
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARI-DARVVAARIVFAGSVTGIF-FARSVTEVAKIYA-RSRPRSYPS  232 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~-~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H-~nlv~l~~g  232 (282)
                      ++|...+.||+|+||.||+             +... ++..||||.++...  ... +.+|++.+..++| +|++.+. +
T Consensus         5 ~~Y~i~~~iG~G~fG~Vy~-------------a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~-~   68 (293)
T d1csna_           5 VHYKVGRRIGEGSFGVIFE-------------GTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVY-Y   68 (293)
T ss_dssp             TTEEEEEEEEECSSCEEEE-------------EEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEE-E
T ss_pred             CceEEEEEEecCCCeEEEE-------------EEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEE-E
Confidence            4688889999999999999             7744 58899999886432  223 8899999999965 8999999 9


Q ss_pred             eEeeCCeEEEEEEecCCCCCccccccCCC
Q 043820          233 VVIRPGYKVGLILELKPDPDPNPDRLHSS  261 (282)
Q Consensus       233 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~  261 (282)
                      +...+...+ +||||+ +|+|.+++....
T Consensus        69 ~~~~~~~~~-~vme~~-~~~l~~~~~~~~   95 (293)
T d1csna_          69 FGQEGLHNV-LVIDLL-GPSLEDLLDLCG   95 (293)
T ss_dssp             EEEETTEEE-EEEECC-CCBHHHHHHHTT
T ss_pred             EeecCCccE-EEEEec-CCCHHHHHHhhc
Confidence            988888888 999998 689998886543

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.93  E-value=3.2e-10  Score=97.77  Aligned_cols=85  Identities=16%  Similarity=0.246  Sum_probs=64.3

Q ss_pred             cCccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCchhH-HHHHHHHhhhCCCCccceeccce
Q 043820          156 DNFSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVTGIF-FARSVTEVAKIYARSRPRSYPSV  233 (282)
Q Consensus       156 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~H~nlv~l~~g~  233 (282)
                      +.|...+.||+|+||.||+             |.. .++..||||.+....  ... +..|+.++..++|+|++.++ +.
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~-------------a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~i~~~l~~~~~i~~~-~~   70 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYL-------------GTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTI-RW   70 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEE-------------EEETTTTEEEEEEEEESCT--TSCCHHHHHHHHHHSTTSTTCCCE-EE
T ss_pred             CEEEEeEEEeeCCCcEEEE-------------EEECCCCCEEEEEEEchhc--cCHHHHHHHHHHHHccCCCcccEE-EE
Confidence            3588889999999999999             764 458899999886432  223 89999999999888766665 55


Q ss_pred             E-eeCCeEEEEEEecCCCCCcccccc
Q 043820          234 V-IRPGYKVGLILELKPDPDPNPDRL  258 (282)
Q Consensus       234 ~-~~~~~~~~lv~Ey~~~GsL~~~l~  258 (282)
                      + .+++..+ +||||+. |+|.+.+.
T Consensus        71 ~~~~~~~~~-ivme~~~-~~l~~~~~   94 (299)
T d1ckia_          71 CGAEGDYNV-MVMELLG-PSLEDLFN   94 (299)
T ss_dssp             EEEETTEEE-EEEECCC-CBHHHHHH
T ss_pred             EEecCCEEE-EEEEEcC-Cchhhhhh
Confidence            5 5555666 9999995 45555544

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.35  E-value=3.6e-07  Score=72.89  Aligned_cols=77  Identities=16%  Similarity=0.189  Sum_probs=57.1

Q ss_pred             ccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCc----------------h--hH-HHHHHHHhhh
Q 043820          160 INNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVT----------------G--IF-FARSVTEVAK  220 (282)
Q Consensus       160 ~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~----------------~--~~-f~~e~~~l~~  220 (282)
                      .+++||+|+||.||+             |...+|..||||.++.....                .  .. ...|...+.+
T Consensus         4 vg~~IG~G~~g~Vy~-------------a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~   70 (191)
T d1zara2           4 IGKLMGEGKESAVFN-------------CYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQK   70 (191)
T ss_dssp             EEEEEEECSSEEEEE-------------EEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHH
T ss_pred             hCCEeeeCcceEEEE-------------EECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHH
Confidence            468999999999999             88778999999986532110                0  11 4567888999


Q ss_pred             CCCCccceeccceEeeCCeEEEEEEecCCCCCccc
Q 043820          221 IYARSRPRSYPSVVIRPGYKVGLILELKPDPDPNP  255 (282)
Q Consensus       221 l~H~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~  255 (282)
                      +.|.+++..+ +..  .  .. ++|||++++.+.+
T Consensus        71 l~~~~v~~~~-~~~--~--~~-lvme~~~~~~~~~   99 (191)
T d1zara2          71 LQGLAVPKVY-AWE--G--NA-VLMELIDAKELYR   99 (191)
T ss_dssp             TTTSSSCCEE-EEE--T--TE-EEEECCCCEEGGG
T ss_pred             ccCCCcceEE-Eec--C--CE-EEEEeeccccccc
Confidence            9999998877 542  2  25 9999999876654

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.25  E-value=4.3e-07  Score=79.38  Aligned_cols=81  Identities=16%  Similarity=0.187  Sum_probs=59.6

Q ss_pred             ccccceecccCccceeccccccccccccceeec-CCCcEEEEEEccCCCCchhHHHHHHHHhhhCC-----------CCc
Q 043820          158 FSINNKLGEGGFGPVYKVVAAGICFAGTITGAR-IDARVVAARIVFAGSVTGIFFARSVTEVAKIY-----------ARS  225 (282)
Q Consensus       158 f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~-~~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~-----------H~n  225 (282)
                      |...++||+|+||+||+             +.. .+|+.||||+++........+.+|+.++..++           |+|
T Consensus        15 Y~i~~~LG~G~fg~Vy~-------------~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~   81 (362)
T d1q8ya_          15 YILVRKLGWGHFSTVWL-------------AKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANH   81 (362)
T ss_dssp             EEEEEEEEECSSEEEEE-------------EEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTT
T ss_pred             EEEEEEEeeCCCeEEEE-------------EEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCc
Confidence            77889999999999999             775 46899999999753222222888998888775           577


Q ss_pred             cceeccceEee--CCeEEEEEEecCCCCCc
Q 043820          226 RPRSYPSVVIR--PGYKVGLILELKPDPDP  253 (282)
Q Consensus       226 lv~l~~g~~~~--~~~~~~lv~Ey~~~GsL  253 (282)
                      ||+++ +++..  ....+ ++++++..+..
T Consensus        82 iv~~~-~~~~~~~~~~~~-~~~~~~~~~~~  109 (362)
T d1q8ya_          82 ILKLL-DHFNHKGPNGVH-VVMVFEVLGEN  109 (362)
T ss_dssp             BCCCC-EEEEEEETTEEE-EEEEECCCCEE
T ss_pred             eEEEE-EEeeecccccee-eeeeecccccc
Confidence            99998 87754  33445 77777665543

>d2qj2a1 g.10.1.1 (A:36-126) Hepatocyte growth factor {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Hairpin loop containing domain-like
superfamily: Hairpin loop containing domain-like
family: Hairpin loop containing domain
domain: Hepatocyte growth factor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.92  E-value=0.21  Score=33.75  Aligned_cols=34  Identities=15%  Similarity=0.404  Sum_probs=26.3

Q ss_pred             CCCHHHHHHHhhcCC----CceeEeeccccCCCceeEEecc
Q 043820           14 SINLNECREKCLENS----SCMVYTNLDIRGGGSGCAMWFG   50 (282)
Q Consensus        14 ~~~~~~C~~~Cl~nC----sC~a~~~~~~~~~~~~C~~~~~   50 (282)
                      ..|.++|.+.|+++-    .|.+|.|..   ....|.+...
T Consensus        29 ~~s~eeCA~rC~~~~~~~f~CrSF~y~~---~~~~C~Ls~~   66 (91)
T d2qj2a1          29 VNTADQCANRCTRNKGLPFTCKAFVFDK---ARKQCLWFPF   66 (91)
T ss_dssp             CSCHHHHHHHHHTTTTCSSCCCEEEEET---TTTEEEEESS
T ss_pred             cCCHHHHHHHHHccCCCCceEEeEEEEC---CCCeEEEccc
Confidence            458999999999854    599999963   3467888543

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=90.50  E-value=0.38  Score=37.99  Aligned_cols=92  Identities=8%  Similarity=0.043  Sum_probs=57.9

Q ss_pred             HHHHhccCccccceecccCccceeccccccccccccceeecCCCcEEEEEEccCCCCchhH-HHHHHHHhhhCC-CCccc
Q 043820          150 TIANATDNFSINNKLGEGGFGPVYKVVAAGICFAGTITGARIDARVVAARIVFAGSVTGIF-FARSVTEVAKIY-ARSRP  227 (282)
Q Consensus       150 el~~at~~f~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~g~~~~~~~vAvK~l~~~~~~~~~-f~~e~~~l~~l~-H~nlv  227 (282)
                      ++..--..+......+-++...||+             ... ++..+.+|+.......... +.+|...+..+. +-.+.
T Consensus         8 ~l~~~~~~~~~~~~~~G~s~~~v~r-------------v~~-~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP   73 (263)
T d1j7la_           8 ELKKLIEKYRCVKDTEGMSPAKVYK-------------LVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVP   73 (263)
T ss_dssp             HHHHHHTTSEEEECSCCCSSSEEEE-------------EEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCC
T ss_pred             HHHHhhhceEEEEcCCCCCCCcEEE-------------EEe-CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCC
Confidence            3333334454333322233457888             543 4566778877644333333 888888877663 44467


Q ss_pred             eeccceEeeCCeEEEEEEecCCCCCccccc
Q 043820          228 RSYPSVVIRPGYKVGLILELKPDPDPNPDR  257 (282)
Q Consensus       228 ~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~l  257 (282)
                      +++ .....++..+ +|||++++..+.+..
T Consensus        74 ~vl-~~~~~~~~~~-lv~~~l~G~~~~~~~  101 (263)
T d1j7la_          74 KVL-HFERHDGWSN-LLMSEADGVLCSEEY  101 (263)
T ss_dssp             CEE-EEEEETTEEE-EEEECCSSEEHHHHT
T ss_pred             cEE-EEEecCCceE-EEEEecccccccccc
Confidence            777 7777777788 999999998876544

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=84.51  E-value=0.89  Score=35.46  Aligned_cols=65  Identities=14%  Similarity=0.135  Sum_probs=43.5

Q ss_pred             eecCCCcEEEEEEccCCCCchhHHHHHHHHhhhCCC--CccceeccceEeeCCeEEEEEEecCCCCCcccc
Q 043820          188 GARIDARVVAARIVFAGSVTGIFFARSVTEVAKIYA--RSRPRSYPSVVIRPGYKVGLILELKPDPDPNPD  256 (282)
Q Consensus       188 g~~~~~~~vAvK~l~~~~~~~~~f~~e~~~l~~l~H--~nlv~l~~g~~~~~~~~~~lv~Ey~~~GsL~~~  256 (282)
                      .....+..+.+|.-......  .+..|+..+..+..  -.+.+++ +....++..+ +||||+++-++.+.
T Consensus        30 ~~~~~~~~~vlK~~~~~~~~--~l~~E~~~l~~L~~~gvpvP~v~-~~~~~~~~~~-~v~~~i~G~~~~~~   96 (255)
T d1nd4a_          30 LSAQGRPVLFVKTDLSGALN--ELQDEAARLSWLATTGVPCAAVL-DVVTEAGRDW-LLLGEVPGQDLLSS   96 (255)
T ss_dssp             EECTTSCCEEEEEECSCTTS--CHHHHHHHHHHHHTTTCCBCCEE-EEEECSSCEE-EEEECCSSEETTTS
T ss_pred             EEeCCCCEEEEEeCCccCHh--HHHHHHHHHHHHHhcCCCCCcee-eecccccceE-EEEEeeeccccccc
Confidence            55555667788875433211  17777777776633  3456777 7777777777 99999998777553