BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043828
(586 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 262 bits (669), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 148/411 (36%), Positives = 233/411 (56%), Gaps = 16/411 (3%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
D+Y + LG+G FG C + TG+ A K I+K ++K + D + + REV++++ L
Sbjct: 49 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD- 107
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
HPNI+ E +EDK YLV E+ GGELFD I+++ ++E AA + + +L + H+
Sbjct: 108 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK 167
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRNY 260
N ++HRDLKPEN L S+++ ++ IDFGLS F+ ++ + +G+ YY+APEVL Y
Sbjct: 168 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTY 227
Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
+ DVWS GVI+YILL G PPF E I + +GK FE W KVS+ AK+L++
Sbjct: 228 DEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRK 287
Query: 321 MLDPNPYNRLTLEEVLENPWIKN---DNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVV 377
ML P R++ + L++ WI+ + + +V N I+QF K + L +
Sbjct: 288 MLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYM 347
Query: 378 ADNL-PQDQMAQIKQMFYMMDTDKNGDLTFEELKDG----LNMIGQKVS-------DPDV 425
L QD+ ++ +F+ MD + +G L EL +G + M GQ S + +V
Sbjct: 348 GSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEV 407
Query: 426 KMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
+++A D D NG + EFVT+++ K + + + L +AFR FD + SG I
Sbjct: 408 DQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKI 458
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 261 bits (668), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 148/411 (36%), Positives = 233/411 (56%), Gaps = 16/411 (3%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
D+Y + LG+G FG C + TG+ A K I+K ++K + D + + REV++++ L
Sbjct: 50 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD- 108
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
HPNI+ E +EDK YLV E+ GGELFD I+++ ++E AA + + +L + H+
Sbjct: 109 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK 168
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRNY 260
N ++HRDLKPEN L S+++ ++ IDFGLS F+ ++ + +G+ YY+APEVL Y
Sbjct: 169 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTY 228
Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
+ DVWS GVI+YILL G PPF E I + +GK FE W KVS+ AK+L++
Sbjct: 229 DEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRK 288
Query: 321 MLDPNPYNRLTLEEVLENPWIKN---DNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVV 377
ML P R++ + L++ WI+ + + +V N I+QF K + L +
Sbjct: 289 MLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYM 348
Query: 378 ADNL-PQDQMAQIKQMFYMMDTDKNGDLTFEELKDG----LNMIGQKVS-------DPDV 425
L QD+ ++ +F+ MD + +G L EL +G + M GQ S + +V
Sbjct: 349 GSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEV 408
Query: 426 KMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
+++A D D NG + EFVT+++ K + + + L +AFR FD + SG I
Sbjct: 409 DQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKI 459
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 261 bits (668), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 148/411 (36%), Positives = 233/411 (56%), Gaps = 16/411 (3%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
D+Y + LG+G FG C + TG+ A K I+K ++K + D + + REV++++ L
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD- 84
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
HPNI+ E +EDK YLV E+ GGELFD I+++ ++E AA + + +L + H+
Sbjct: 85 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK 144
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRNY 260
N ++HRDLKPEN L S+++ ++ IDFGLS F+ ++ + +G+ YY+APEVL Y
Sbjct: 145 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTY 204
Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
+ DVWS GVI+YILL G PPF E I + +GK FE W KVS+ AK+L++
Sbjct: 205 DEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRK 264
Query: 321 MLDPNPYNRLTLEEVLENPWIKN---DNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVV 377
ML P R++ + L++ WI+ + + +V N I+QF K + L +
Sbjct: 265 MLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYM 324
Query: 378 ADNL-PQDQMAQIKQMFYMMDTDKNGDLTFEELKDG----LNMIGQKVS-------DPDV 425
L QD+ ++ +F+ MD + +G L EL +G + M GQ S + +V
Sbjct: 325 GSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEV 384
Query: 426 KMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
+++A D D NG + EFVT+++ K + + + L +AFR FD + SG I
Sbjct: 385 DQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKI 435
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 148/412 (35%), Positives = 227/412 (55%), Gaps = 17/412 (4%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
D+Y K+LG G +G C + TG A K I K + T + + EV +++ L
Sbjct: 4 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD- 62
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
HPNI+ E +EDK YLVME+ GGELFD I+ + ++E AA + K +L H+
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHK 122
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRNY 260
+ ++HRDLKPEN L S ++ +K +DFGLS F+ G + E +G+ YY+APEVLR+ Y
Sbjct: 123 HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKY 182
Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
+ DVWS GVI+YILLCG PPF +T++ I + +GK F+ W +VS EAK+LVK
Sbjct: 183 DEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKL 242
Query: 321 MLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTS----RIKQFSIMNKFKKKVLRV 376
ML P R++ EE L +PWI + +G + + +K+F K + +
Sbjct: 243 MLTYEPSKRISAEEALNHPWIVKFCSQKHTDVGKHALTGALGNMKKFQSSQKLAQAAMLF 302
Query: 377 VADNLPQ-DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMI----GQKVSDPD------- 424
+ L ++ ++ Q+F +D + +G L +EL +G + G VSD D
Sbjct: 303 MGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAE 362
Query: 425 VKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
V ++++ D D NG + EFVT+ + + + + + L AF+ FD + SG I
Sbjct: 363 VDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKI 414
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 252 bits (643), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 146/411 (35%), Positives = 226/411 (54%), Gaps = 16/411 (3%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
D+Y + LG+G FG C + TG+ A K I+K ++K + D + + REV++++ L
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD- 84
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
HPNI E +EDK YLV E+ GGELFD I+++ ++E AA + + +L + H+
Sbjct: 85 HPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHK 144
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRNY 260
N ++HRDLKPEN L S+++ ++ IDFGLS F+ ++ + +G+ YY+APEVL Y
Sbjct: 145 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGTY 204
Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
+ DVWS GVI+YILL G PPF E I + +GK FE W KVS+ AK+L++
Sbjct: 205 DEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRK 264
Query: 321 MLDPNPYNRLTLEEVLENPWIKN---DNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVV 377
L P R++ + L++ WI+ + + +V N I+QF K + L
Sbjct: 265 XLTYVPSXRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYX 324
Query: 378 ADNL-PQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMI----GQKVSDPD-------V 425
L QD+ ++ +F+ D + +G L EL +G + GQ S D V
Sbjct: 325 GSKLTSQDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEV 384
Query: 426 KMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
+++A D D NG + EFVT++ K + + + L +AFR FD + SG I
Sbjct: 385 DQVLDAVDFDKNGYIEYSEFVTVAXDRKTLLSRERLERAFRXFDSDNSGKI 435
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 248 bits (633), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 146/421 (34%), Positives = 227/421 (53%), Gaps = 23/421 (5%)
Query: 76 EGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIM 135
+G ++Y LG+G FG +C + T + YA K I K K + D + REVE++
Sbjct: 17 QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELL 75
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV 195
+ L HPNI+ E ED + Y+V EL GGELFD I+ + ++E AA + K + +
Sbjct: 76 KKLD-HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGI 134
Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV 255
H++ ++HRDLKPEN L ++ +K IDFGLS F+ + + +G+ YY+APEV
Sbjct: 135 TYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV 194
Query: 256 LRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK 315
LR Y + DVWSAGVI+YILL G PPF+ + E I + GK F+ W +S +AK
Sbjct: 195 LRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAK 254
Query: 316 ELVKNMLDPNPYNRLTLEEVLENPWI-KNDNHAPNVSLGGNVTS---RIKQFSIMNKFKK 371
+L++ ML +P R+T + LE+PWI K + P +S ++ S I+QF K +
Sbjct: 255 DLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQ 314
Query: 372 KVLRVVADNLPQ-DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMI-------------- 416
L +A L D+ Q+ ++F +DT+ +G L +EL G +
Sbjct: 315 AALLYMASKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQN 374
Query: 417 -GQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGF 475
G + D + LM D+DG+G + EF+ ++ + + + + +AF+ FDK+ SG
Sbjct: 375 EGSTIEDQ-IDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGK 433
Query: 476 I 476
I
Sbjct: 434 I 434
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 143/414 (34%), Positives = 234/414 (56%), Gaps = 15/414 (3%)
Query: 76 EGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIM 135
+G++ + Y K+LG G +G C + T A K I K + T + + EV ++
Sbjct: 32 KGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSN-SKLLEEVAVL 90
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV 195
+ L HPNI+ + +EDK YLVME +GGELFD I+++ + E AA + K +L V
Sbjct: 91 K-LLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGV 149
Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV 255
H++ ++HRDLKPEN L +++ +K +DFGLS F+ ++ E +G+ YY+APEV
Sbjct: 150 TYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEV 209
Query: 256 LRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK 315
LR+ Y + DVWS GVI++ILL G PPF +T++ I + +GK F+ W VS+ AK
Sbjct: 210 LRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAK 269
Query: 316 ELVKNMLDPNPYNRLTLEEVLENPWIKN--DNHAPNVSLG--GNVTSRIKQFSIMNKFKK 371
+L+K ML + R++ ++ LE+PWIK + L N +++F K +
Sbjct: 270 DLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQ 329
Query: 372 KVLRVVADNL-PQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMI-GQKVS-------D 422
L +A L Q++ ++ +F +D + +G L +EL DG + + G++V+ +
Sbjct: 330 AALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIE 389
Query: 423 PDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
+V ++ AAD D NG + EFVT+++ K + + D L AF+ FD++ +G I
Sbjct: 390 SEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKI 443
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 120/268 (44%), Positives = 163/268 (60%), Gaps = 4/268 (1%)
Query: 75 AEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEI 134
+G+I YT +GRG +G + T A KKI K ++ D+D ++E+EI
Sbjct: 20 TKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE---DVDRFKQEIEI 76
Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
M+ L HPNI+ E +ED IYLVMELC GGELF+R+V+K + E AA + K +L
Sbjct: 77 MKSL-DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSA 135
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
V CH+ V HRDLKPENFLF S +S LK IDFGL+ FKPG+ VG+PYY++P+
Sbjct: 136 VAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQ 195
Query: 255 VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
VL YGPE D WSAGV++Y+LLCG PPF A T+ + I G F W VS +A
Sbjct: 196 VLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQA 255
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIK 342
+ L++ +L +P R+T + LE+ W +
Sbjct: 256 ESLIRRLLTKSPKQRITSLQALEHEWFE 283
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 120/268 (44%), Positives = 163/268 (60%), Gaps = 4/268 (1%)
Query: 75 AEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEI 134
+G+I YT +GRG +G + T A KKI K ++ D+D ++E+EI
Sbjct: 3 TKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE---DVDRFKQEIEI 59
Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
M+ L HPNI+ E +ED IYLVMELC GGELF+R+V+K + E AA + K +L
Sbjct: 60 MKSL-DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSA 118
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
V CH+ V HRDLKPENFLF S +S LK IDFGL+ FKPG+ VG+PYY++P+
Sbjct: 119 VAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQ 178
Query: 255 VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
VL YGPE D WSAGV++Y+LLCG PPF A T+ + I G F W VS +A
Sbjct: 179 VLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQA 238
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIK 342
+ L++ +L +P R+T + LE+ W +
Sbjct: 239 ESLIRRLLTKSPKQRITSLQALEHEWFE 266
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 229 bits (584), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 143/446 (32%), Positives = 235/446 (52%), Gaps = 33/446 (7%)
Query: 60 KKSISFQLRSVVSNPA------EGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKK 113
++++ FQ + NP EG I + Y ++LG G +G C E A K
Sbjct: 11 RENLYFQ--GIAINPGMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKV 68
Query: 114 IAKEKLKTEIDIDD----------VRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMEL 163
I K + DD + E+ +++ L HPNI+ + +EDK YLV E
Sbjct: 69 IKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLD-HPNIIKLFDVFEDKKYFYLVTEF 127
Query: 164 CEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQ 223
EGGELF++I+N+ + E AA + K IL + H++ ++HRD+KPEN L + +
Sbjct: 128 YEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLN 187
Query: 224 LKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPF 283
+K +DFGLS FF + + +G+ YY+APEVL++ Y + DVWS GVI+YILLCG PPF
Sbjct: 188 IKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPF 247
Query: 284 WAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK- 342
+ ++ I + +GK F+ + W +S EAKEL+K ML + R T EE L + WIK
Sbjct: 248 GGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKK 307
Query: 343 ---NDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQ-DQMAQIKQMFYMMDT 398
N N + +L G S +++F K + + + L ++ ++ +F +D
Sbjct: 308 YANNINKSDQKTLCG-ALSNMRKFEGSQKLAQAAILFIGSKLTTLEERKELTDIFKKLDK 366
Query: 399 DKNGDLTFEELKDGLNMIGQ--------KVSDPDVKMLMEAADVDGNGLLSCDEFVTMSV 450
+ +G L +EL +G N++ K + +V +++ D D NG + EF+++ +
Sbjct: 367 NGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCM 426
Query: 451 HLKRIGNDDILSQAFRFFDKNQSGFI 476
+ + +++ L +AF FD ++SG I
Sbjct: 427 DKQILFSEERLRRAFNLFDTDKSGKI 452
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 6/63 (9%)
Query: 388 QIKQMFYMMDTDKNGDLTFEELKD--GLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEF 445
++++ F + DTDK+G +T EEL + GL I +K + ++ AD + + ++ DEF
Sbjct: 436 RLRRAFNLFDTDKSGKITKEELANLFGLTSISEKTWND----VLGEADQNKDNMIDFDEF 491
Query: 446 VTM 448
V+M
Sbjct: 492 VSM 494
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 119/299 (39%), Positives = 174/299 (58%), Gaps = 4/299 (1%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
++ D+Y +ELG+G F + +C +I TG+ YA K I +KL D + RE I R
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSAR-DHQKLEREARICRL 59
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
L KHPNIV ++ ++ YLV +L GGELF+ IV + +Y+E A+ + IL V
Sbjct: 60 L-KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNH 118
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ-FCEIVGSPYYMAPEVL 256
CH NG++HRDLKPEN L A S+ + +K DFGL+I + +Q + G+P Y++PEVL
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 257 RRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK 315
R++ YG +D+W+ GVI+YILL G PPFW E + + I G DF W V+ EAK
Sbjct: 179 RKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK 238
Query: 316 ELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVL 374
+L+ ML NP R+T E L++PWI + ++ +K+F+ K K +L
Sbjct: 239 DLINKMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLKGAIL 297
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 119/299 (39%), Positives = 174/299 (58%), Gaps = 4/299 (1%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
++ D+Y +ELG+G F + +C +I TG+ YA K I +KL D + RE I R
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSAR-DHQKLEREARICRL 59
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
L KHPNIV ++ ++ YLV +L GGELF+ IV + +Y+E A+ + IL V
Sbjct: 60 L-KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNH 118
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ-FCEIVGSPYYMAPEVL 256
CH NG++HRDLKPEN L A S+ + +K DFGL+I + +Q + G+P Y++PEVL
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 257 RRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK 315
R++ YG +D+W+ GVI+YILL G PPFW E + + I G DF W V+ EAK
Sbjct: 179 RKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK 238
Query: 316 ELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVL 374
+L+ ML NP R+T E L++PWI + ++ +K+F+ K K +L
Sbjct: 239 DLINKMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLKGAIL 297
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 218 bits (556), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 113/261 (43%), Positives = 159/261 (60%), Gaps = 1/261 (0%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
D+Y K+LG G +G C + TG A K I K + T + + EV +++ L
Sbjct: 21 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL-D 79
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
HPNI+ E +EDK YLVME+ GGELFD I+ + ++E AA + K +L H+
Sbjct: 80 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHK 139
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRNY 260
+ ++HRDLKPEN L S ++ +K +DFGLS F+ G + E +G+ YY+APEVLR+ Y
Sbjct: 140 HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKY 199
Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
+ DVWS GVI+YILLCG PPF +T++ I + +GK F+ W +VS EAK+LVK
Sbjct: 200 DEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKL 259
Query: 321 MLDPNPYNRLTLEEVLENPWI 341
ML P R++ EE L +PWI
Sbjct: 260 MLTYEPSKRISAEEALNHPWI 280
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 110/295 (37%), Positives = 165/295 (55%), Gaps = 3/295 (1%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
D Y +ELG+G F + +C TG +A K I +KL D + RE I R L +
Sbjct: 29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKL-Q 86
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
HPNIV ++ +++ YLV +L GGELF+ IV + Y+E A+ + IL + CH
Sbjct: 87 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 146
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRN- 259
NG++HR+LKPEN L A ++ + +K DFGL+I E + G+P Y++PEVL+++
Sbjct: 147 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP 206
Query: 260 YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVK 319
Y +D+W+ GVI+YILL G PPFW E + + I G D+ W V+ EAK L+
Sbjct: 207 YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID 266
Query: 320 NMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVL 374
+ML NP R+T ++ L+ PWI N + + +K+F+ K K +L
Sbjct: 267 SMLTVNPKKRITADQALKVPWICNRERVASAIHRQDTVDCLKKFNARRKLKGAIL 321
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 212 bits (540), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 121/329 (36%), Positives = 182/329 (55%), Gaps = 8/329 (2%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +ELG+G F + +C ++ G+ YA I +KL D + RE I R L K
Sbjct: 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSAR-DHQKLEREARICR-LLK 68
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
HPNIV ++ ++ YL+ +L GGELF+ IV + +Y+E A+ + IL V CH+
Sbjct: 69 HPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ 128
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ--FCEIVGSPYYMAPEVLRR 258
GV+HR+LKPEN L A + + +K DFGL+I + GEQ + G+P Y++PEVLR+
Sbjct: 129 MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE-GEQQAWFGFAGTPGYLSPEVLRK 187
Query: 259 N-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL 317
+ YG +D+W+ GVI+YILL G PPFW E + + I G DF W V+ EAK+L
Sbjct: 188 DPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDL 247
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVV 377
+ ML NP R+T E L++PWI + + + +K+F+ K K +L V+
Sbjct: 248 INKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGAILTVM 307
Query: 378 --ADNLPQDQMAQIKQMFYMMDTDKNGDL 404
N + IK +++ NGD
Sbjct: 308 LATRNFSVRKQEIIKVTEQLIEAISNGDF 336
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 212 bits (540), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 123/302 (40%), Positives = 172/302 (56%), Gaps = 10/302 (3%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
D + ELGRG I ++C + T + YA K LK +D VR E+ ++ L
Sbjct: 53 DFFEVESELGRGATSIVYRCKQKGTQKPYALKV-----LKKTVDKKIVRTEIGVLLRL-S 106
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
HPNI+ KE +E I LV+EL GGELFDRIV KG+Y+ER AA K IL V HE
Sbjct: 107 HPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHE 166
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRR-N 259
NG++HRDLKPEN L+A + ++ LK DFGLS + + G+P Y APE+LR
Sbjct: 167 NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCA 226
Query: 260 YGPEIDVWSAGVIIYILLCGVPPFWAET-EEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
YGPE+D+WS G+I YILLCG PF+ E ++ + I+ + F W +VS AK+LV
Sbjct: 227 YGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLV 286
Query: 319 KNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVVA 378
+ ++ +P RLT + L++PW+ A N ++++F+ K K V VVA
Sbjct: 287 RKLIVLDPKKRLTTFQALQHPWVT--GKAANFVHMDTAQKKLQEFNARRKLKAAVKAVVA 344
Query: 379 DN 380
+
Sbjct: 345 SS 346
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 211 bits (538), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 170/284 (59%), Gaps = 1/284 (0%)
Query: 60 KKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKL 119
++++ FQ + + D+Y + LG+G FG C + TG+ A K I+K ++
Sbjct: 11 RENLYFQGPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQV 70
Query: 120 KTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHY 179
K + D + + REV++++ L HPNI+ E +EDK YLV E+ GGELFD I+++ +
Sbjct: 71 KQKTDKESLLREVQLLKQLD-HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF 129
Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
+E AA + + +L + H+N ++HRDLKPEN L S+++ ++ IDFGLS F+ +
Sbjct: 130 SEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK 189
Query: 240 QFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGK 299
+ + +G+ YY+APEVL Y + DVWS GVI+YILL G PPF E I + +GK
Sbjct: 190 KMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGK 249
Query: 300 IDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
FE W KVS+ AK+L++ ML P R++ + L++ WI+
Sbjct: 250 YTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQT 293
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/291 (39%), Positives = 167/291 (57%), Gaps = 6/291 (2%)
Query: 83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
Y +ELG+G F + +C ++ G+ YA K I +KL D + RE I R L KHP
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSAR-DHQKLEREARICR-LLKHP 81
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
NIV ++ ++ YL+ +L GGELF+ IV + +Y+E A+ + IL V CH+ G
Sbjct: 82 NIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 141
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ--FCEIVGSPYYMAPEVLRRN- 259
V+HRDLKPEN L A + + +K DFGL+I + GEQ + G+P Y++PEVLR++
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVE-GEQQAWFGFAGTPGYLSPEVLRKDP 200
Query: 260 YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVK 319
YG +D+W+ GVI+YILL G PPFW E + + I G DF W V+ EAK+L+
Sbjct: 201 YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 260
Query: 320 NMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFK 370
ML NP R+T E L++PWI + + + +K+F+ K K
Sbjct: 261 KMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLK 311
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/295 (38%), Positives = 173/295 (58%), Gaps = 5/295 (1%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
+I D Y F LG G F + T + A K IAKE L+ + + E+ ++ H
Sbjct: 15 DIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG--SMENEIAVL-H 71
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
KHPNIV + YE +YL+M+L GGELFDRIV KG YTER A+ + +L VK
Sbjct: 72 KIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKY 131
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL- 256
H+ G++HRDLKPEN L+ E+S++ DFGLS PG G+P Y+APEVL
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLA 191
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
++ Y +D WS GVI YILLCG PPF+ E + + I++ + +F+ W +S AK+
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKD 251
Query: 317 LVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKK 371
++++++ +P R T E+ L++PWI D A + ++ +V+ +IK+ +K+K+
Sbjct: 252 FIRHLMEKDPEKRFTCEQALQHPWIAGDT-ALDKNIHQSVSEQIKKNFAKSKWKQ 305
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/295 (38%), Positives = 173/295 (58%), Gaps = 5/295 (1%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
+I D Y F LG G F + T + A K IAKE L+ + + E+ ++ H
Sbjct: 15 DIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG--SMENEIAVL-H 71
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
KHPNIV + YE +YL+M+L GGELFDRIV KG YTER A+ + +L VK
Sbjct: 72 KIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKY 131
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL- 256
H+ G++HRDLKPEN L+ E+S++ DFGLS PG G+P Y+APEVL
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLA 191
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
++ Y +D WS GVI YILLCG PPF+ E + + I++ + +F+ W +S AK+
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKD 251
Query: 317 LVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKK 371
++++++ +P R T E+ L++PWI D A + ++ +V+ +IK+ +K+K+
Sbjct: 252 FIRHLMEKDPEKRFTCEQALQHPWIAGDT-ALDKNIHQSVSEQIKKNFAKSKWKQ 305
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 107/267 (40%), Positives = 158/267 (59%), Gaps = 2/267 (0%)
Query: 76 EGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIM 135
+G ++Y LG+G FG +C + T + YA K I K K + D + REVE++
Sbjct: 17 QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELL 75
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV 195
+ L HPNI+ E ED + Y+V EL GGELFD I+ + ++E AA + K + +
Sbjct: 76 KKL-DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGI 134
Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV 255
H++ ++HRDLKPEN L ++ +K IDFGLS F+ + + +G+ YY+APEV
Sbjct: 135 TYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV 194
Query: 256 LRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK 315
LR Y + DVWSAGVI+YILL G PPF+ + E I + GK F+ W +S +AK
Sbjct: 195 LRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAK 254
Query: 316 ELVKNMLDPNPYNRLTLEEVLENPWIK 342
+L++ ML +P R+T + LE+PWI+
Sbjct: 255 DLIRKMLTFHPSLRITATQCLEHPWIQ 281
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 208 bits (530), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 112/295 (37%), Positives = 167/295 (56%), Gaps = 4/295 (1%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
++ D+Y +++G+G F + +C ++ TG YA K I +KL D + RE I R
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSAR-DHQKLEREARICR- 58
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
L KH NIV ++ ++ YLV +L GGELF+ IV + +Y+E A+ + IL V
Sbjct: 59 LLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLH 118
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ-FCEIVGSPYYMAPEVL 256
CH+ GV+HRDLKPEN L A + + +K DFGL+I + +Q + G+P Y++PEVL
Sbjct: 119 CHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 257 RRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK 315
R+ YG +D+W+ GVI+YILL G PPFW E + + I G DF W V+ EAK
Sbjct: 179 RKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAK 238
Query: 316 ELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFK 370
L+ ML NP R+T E L++PW+ + ++ +K+F+ K K
Sbjct: 239 NLINQMLTINPAKRITAHEALKHPWVCQRSTVASMMHRQETVECLKKFNARRKLK 293
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 208 bits (530), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 107/267 (40%), Positives = 158/267 (59%), Gaps = 2/267 (0%)
Query: 76 EGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIM 135
+G ++Y LG+G FG +C + T + YA K I K K + D + REVE++
Sbjct: 17 QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELL 75
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV 195
+ L HPNI+ E ED + Y+V EL GGELFD I+ + ++E AA + K + +
Sbjct: 76 KKL-DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGI 134
Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV 255
H++ ++HRDLKPEN L ++ +K IDFGLS F+ + + +G+ YY+APEV
Sbjct: 135 TYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV 194
Query: 256 LRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK 315
LR Y + DVWSAGVI+YILL G PPF+ + E I + GK F+ W +S +AK
Sbjct: 195 LRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAK 254
Query: 316 ELVKNMLDPNPYNRLTLEEVLENPWIK 342
+L++ ML +P R+T + LE+PWI+
Sbjct: 255 DLIRKMLTFHPSLRITATQCLEHPWIQ 281
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 114/295 (38%), Positives = 173/295 (58%), Gaps = 5/295 (1%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
+I D Y F LG G F + T + A K IAK+ L+ + + E+ ++ H
Sbjct: 15 DIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEG--SMENEIAVL-H 71
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
KHPNIV + YE +YL+M+L GGELFDRIV KG YTER A+ + +L VK
Sbjct: 72 KIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKY 131
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL- 256
H+ G++HRDLKPEN L+ E+S++ DFGLS PG G+P Y+APEVL
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLA 191
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
++ Y +D WS GVI YILLCG PPF+ E + + I++ + +F+ W +S AK+
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKD 251
Query: 317 LVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKK 371
++++++ +P R T E+ L++PWI D A + ++ +V+ +IK+ +K+K+
Sbjct: 252 FIRHLMEKDPEKRFTCEQALQHPWIAGDT-ALDKNIHQSVSEQIKKNFAKSKWKQ 305
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 207 bits (526), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/290 (37%), Positives = 171/290 (58%), Gaps = 5/290 (1%)
Query: 83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
+ F + LG G F E TG+ +A K I K+ LK + + E+ ++R + KH
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKES--SIENEIAVLRKI-KHE 80
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
NIV ++ YE + +YLVM+L GGELFDRIV KG YTE+ A+ + + +L V H G
Sbjct: 81 NIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMG 140
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL-RRNYG 261
++HRDLKPEN L+ E S++ DFGLS G+ G+P Y+APEVL ++ Y
Sbjct: 141 IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYS 200
Query: 262 PEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNM 321
+D WS GVI YILLCG PPF+ E + + I++ + +F+ W +S AK+ ++N+
Sbjct: 201 KAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNL 260
Query: 322 LDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKK 371
++ +P R T E+ +PWI D A N ++ +V+++I++ +K+++
Sbjct: 261 MEKDPNKRYTCEQAARHPWIAGDT-ALNKNIHESVSAQIRKNFAKSKWRQ 309
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/264 (39%), Positives = 154/264 (58%), Gaps = 3/264 (1%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
D Y +ELG+G F + +C TG +A K I +KL D + RE I R L +
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKL-Q 63
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
HPNIV ++ +++ YLV +L GGELF+ IV + Y+E A+ + IL + CH
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRN- 259
NG++HR+LKPEN L A ++ + +K DFGL+I E + G+P Y++PEVL+++
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP 183
Query: 260 YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVK 319
Y +D+W+ GVI+YILL G PPFW E + + I G D+ W V+ EAK L+
Sbjct: 184 YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID 243
Query: 320 NMLDPNPYNRLTLEEVLENPWIKN 343
+ML NP R+T ++ L+ PWI N
Sbjct: 244 SMLTVNPKKRITADQALKVPWICN 267
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 206 bits (523), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 105/264 (39%), Positives = 154/264 (58%), Gaps = 3/264 (1%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
D Y +ELG+G F + +C TG +A K I +KL D + RE I R L +
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKL-Q 63
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
HPNIV ++ +++ YLV +L GGELF+ IV + Y+E A+ + IL + CH
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRN- 259
NG++HR+LKPEN L A ++ + +K DFGL+I E + G+P Y++PEVL+++
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP 183
Query: 260 YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVK 319
Y +D+W+ GVI+YILL G PPFW E + + I G D+ W V+ EAK L+
Sbjct: 184 YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID 243
Query: 320 NMLDPNPYNRLTLEEVLENPWIKN 343
+ML NP R+T ++ L+ PWI N
Sbjct: 244 SMLTVNPKKRITADQALKVPWICN 267
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 206 bits (523), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 105/264 (39%), Positives = 154/264 (58%), Gaps = 3/264 (1%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
D Y +ELG+G F + +C TG +A K I +KL D + RE I R L +
Sbjct: 5 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKL-Q 62
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
HPNIV ++ +++ YLV +L GGELF+ IV + Y+E A+ + IL + CH
Sbjct: 63 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 122
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRN- 259
NG++HR+LKPEN L A ++ + +K DFGL+I E + G+P Y++PEVL+++
Sbjct: 123 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP 182
Query: 260 YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVK 319
Y +D+W+ GVI+YILL G PPFW E + + I G D+ W V+ EAK L+
Sbjct: 183 YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID 242
Query: 320 NMLDPNPYNRLTLEEVLENPWIKN 343
+ML NP R+T ++ L+ PWI N
Sbjct: 243 SMLTVNPKKRITADQALKVPWICN 266
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 206 bits (523), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 109/269 (40%), Positives = 157/269 (58%), Gaps = 4/269 (1%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
+I D Y F LG G F + T + A K IAKE L+ + + E+ ++ H
Sbjct: 15 DIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG--SMENEIAVL-H 71
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
KHPNIV + YE +YL+M+L GGELFDRIV KG YTER A+ + +L VK
Sbjct: 72 KIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKY 131
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL- 256
H+ G++HRDLKPEN L+ E+S++ DFGLS PG G+P Y+APEVL
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLA 191
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
++ Y +D WS GVI YILLCG PPF+ E + + I++ + +F+ W +S AK+
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKD 251
Query: 317 LVKNMLDPNPYNRLTLEEVLENPWIKNDN 345
++++++ +P R T E+ L++PWI D
Sbjct: 252 FIRHLMEKDPEKRFTCEQALQHPWIAGDT 280
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 163/281 (58%), Gaps = 11/281 (3%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
NI + F + LG G F + TG+ +A K I K + +++ E+ +++
Sbjct: 6 NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLEN---EIAVLKK 62
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
+ KH NIVT ++ YE YLVM+L GGELFDRI+ +G YTE+ A+ V + +L VK
Sbjct: 63 I-KHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKY 121
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL- 256
HENG++HRDLKPEN L+ ENS++ DFGLS + G G+P Y+APEVL
Sbjct: 122 LHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG-IMSTACGTPGYVAPEVLA 180
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
++ Y +D WS GVI YILLCG PPF+ ETE + I G +FE W +S+ AK+
Sbjct: 181 QKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKD 240
Query: 317 LVKNMLDPNPYNRLTLEEVLENPWIKNDNHA-----PNVSL 352
+ ++L+ +P R T E+ L +PWI + P+VSL
Sbjct: 241 FICHLLEKDPNERYTCEKALSHPWIDGNTALHRDIYPSVSL 281
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 202 bits (514), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 111/297 (37%), Positives = 166/297 (55%), Gaps = 6/297 (2%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
D Y +ELG+G F + +C + + YA K I +KL D + RE I R L K
Sbjct: 31 DDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSAR-DHQKLEREARICR-LLK 88
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
HPNIV ++ ++ YLV +L GGELF+ IV + +Y+E A+ IL V H+
Sbjct: 89 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQ 148
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ--FCEIVGSPYYMAPEVLRR 258
+ ++HRDLKPEN L A + + +K DFGL+I + GEQ + G+P Y++PEVLR+
Sbjct: 149 HDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQ-GEQQAWFGFAGTPGYLSPEVLRK 207
Query: 259 N-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL 317
+ YG +D+W+ GVI+YILL G PPFW E + + I G DF W V+ EAK L
Sbjct: 208 DPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNL 267
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVL 374
+ ML NP R+T ++ L++PW+ + ++ +++F+ K K +L
Sbjct: 268 INQMLTINPAKRITADQALKHPWVCQRSTVASMMHRQETVECLRKFNARRKLKGAIL 324
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 174/309 (56%), Gaps = 12/309 (3%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE--IDIDDVRREVEIMRHL 138
D Y + +G+G F + +C ETG+ +A K + K + + +D++RE I H+
Sbjct: 24 DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASIC-HM 82
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH----YTERAAAAVGKTILRI 194
KHP+IV E Y +Y+V E +G +L IV + Y+E A+ + IL
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSPYYMAP 253
++ CH+N ++HRD+KPEN L A ++ +K DFG++I + G VG+P++MAP
Sbjct: 143 LRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAP 202
Query: 254 EVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSK 312
EV++R YG +DVW GVI++ILL G PF+ T+E + II+GK W +S+
Sbjct: 203 EVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISE 261
Query: 313 EAKELVKNMLDPNPYNRLTLEEVLENPWIK-NDNHAPNVSLGGNVTSRIKQFSIMNKFKK 371
AK+LV+ ML +P R+T+ E L +PW+K D +A + L V ++++F+ K K
Sbjct: 262 SAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETV-EQLRKFNARRKLKG 320
Query: 372 KVLRVVADN 380
VL V+ +
Sbjct: 321 AVLAAVSSH 329
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 156/272 (57%), Gaps = 10/272 (3%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEI 134
N+ D Y G+ELG G+F + +C E TG YA K I K + K+ + +D+ REV I
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
++ + +HPN++T E YE+K + L++EL GGELFD + K TE A K IL
Sbjct: 68 LKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 195 VKVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAP 253
V H + H DLKPEN + D + ++K IDFGL+ G +F I G+P ++AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAP 186
Query: 254 EVLRRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
E++ NY P E D+WS GVI YILL G PF +T++ + +FE + +
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
S AK+ ++ +L +P R+T+++ L++PWIK
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 111/305 (36%), Positives = 167/305 (54%), Gaps = 17/305 (5%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEI 134
N+ D Y G+ELG G+F + +C E TG YA K I K + K+ + +D+ REV I
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
++ + +HPN++T E YE+K + L++EL GGELFD + K TE A K IL
Sbjct: 68 LKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 195 VKVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAP 253
V H + H DLKPEN + D + ++K IDFGL+ G +F I G+P ++AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 254 EVLRRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
E++ NY P E D+WS GVI YILL G PF +T++ + +FE + +
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFK 370
S AK+ ++ +L +P R+T+++ L++PWIK + +S + + M KFK
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAVN-------MEKFK 297
Query: 371 KKVLR 375
K R
Sbjct: 298 KFAAR 302
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 156/272 (57%), Gaps = 10/272 (3%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEI 134
N+ D Y G+ELG G+F + +C E TG YA K I K + K+ + +D+ REV I
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
++ + +HPN++T E YE+K + L++EL GGELFD + K TE A K IL
Sbjct: 68 LKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 195 VKVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAP 253
V H + H DLKPEN + D + ++K IDFGL+ G +F I G+P ++AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 254 EVLRRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
E++ NY P E D+WS GVI YILL G PF +T++ + +FE + +
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
S AK+ ++ +L +P R+T+++ L++PWIK
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 104/269 (38%), Positives = 156/269 (57%), Gaps = 10/269 (3%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEIMRH 137
D Y G+ELG G+F I +C + TG+ YA K I K +L + + +++ REV I+R
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
+ +HPNI+T + +E+K + L++EL GGELFD + K TE A K IL V
Sbjct: 65 I-RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHY 123
Query: 198 CHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
H + H DLKPEN + D + N ++K IDFG++ + G +F I G+P ++APE++
Sbjct: 124 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV 183
Query: 257 RRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
NY P E D+WS GVI YILL G PF ET++ I DF+ + + S+
Sbjct: 184 --NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSEL 241
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPWIK 342
AK+ ++ +L +P R+T+ + LE+ WIK
Sbjct: 242 AKDFIRRLLVKDPKRRMTIAQSLEHSWIK 270
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 188 bits (478), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 156/272 (57%), Gaps = 10/272 (3%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEI 134
N+ D Y G+ELG G+F + +C E TG YA K I K + K+ + +D+ REV I
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
++ + +HPN++T E YE+K + L++EL GGELFD + K TE A K IL
Sbjct: 68 LKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 195 VKVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAP 253
V H + H DLKPEN + D + ++K IDFGL+ G +F I G+P ++AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 254 EVLRRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
E++ NY P E D+WS GVI YILL G PF +T++ + +FE + +
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
S AK+ ++ +L +P R+T+++ L++PWIK
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 156/272 (57%), Gaps = 10/272 (3%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEI 134
N+ D Y G+ELG G+F + +C E TG YA K I K + K+ + +D+ REV I
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
++ + +HPN++T E YE+K + L++EL GGELFD + K TE A K IL
Sbjct: 68 LKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 195 VKVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAP 253
V H + H DLKPEN + D + ++K IDFGL+ G +F I G+P ++AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 254 EVLRRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
E++ NY P E D+WS GVI YILL G PF +T++ + +FE + +
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
S AK+ ++ +L +P R+T+++ L++PWIK
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 188 bits (477), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 156/272 (57%), Gaps = 10/272 (3%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEI 134
N+ D Y G+ELG G+F + +C E TG YA K I K + K+ + +D+ REV I
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
++ + +HPN++T E YE+K + L++EL GGELFD + K TE A K IL
Sbjct: 68 LKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 195 VKVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAP 253
V H + H DLKPEN + D + ++K IDFGL+ G +F I G+P ++AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 254 EVLRRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
E++ NY P E D+WS GVI YILL G PF +T++ + +FE + +
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
S AK+ ++ +L +P R+T+++ L++PWIK
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 156/272 (57%), Gaps = 10/272 (3%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEI 134
N+ D Y G+ELG G+F + +C E TG YA K I K + K+ + +D+ REV I
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
++ + +HPN++T E YE+K + L++EL GGELFD + K TE A K IL
Sbjct: 68 LKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 195 VKVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAP 253
V H + H DLKPEN + D + ++K IDFGL+ G +F I G+P ++AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 254 EVLRRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
E++ NY P E D+WS GVI YILL G PF +T++ + +FE + +
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
S AK+ ++ +L +P R+T+++ L++PWIK
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 156/272 (57%), Gaps = 10/272 (3%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEI 134
N+ D Y G+ELG G+F + +C E TG YA K I K + K+ + +D+ REV I
Sbjct: 7 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 66
Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
++ + +HPN++T E YE+K + L++EL GGELFD + K TE A K IL
Sbjct: 67 LKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 125
Query: 195 VKVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAP 253
V H + H DLKPEN + D + ++K IDFGL+ G +F I G+P ++AP
Sbjct: 126 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 185
Query: 254 EVLRRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
E++ NY P E D+WS GVI YILL G PF +T++ + +FE + +
Sbjct: 186 EIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 243
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
S AK+ ++ +L +P R+T+++ L++PWIK
Sbjct: 244 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 103/272 (37%), Positives = 157/272 (57%), Gaps = 10/272 (3%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEI 134
++ D Y G+ELG G+F I +C + TG+ YA K I K +L + + +++ REV I
Sbjct: 9 DVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 68
Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
+R + +HPNI+T + +E+K + L++EL GGELFD + K TE A K IL
Sbjct: 69 LREI-RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDG 127
Query: 195 VKVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAP 253
V H + H DLKPEN + D + N ++K IDFG++ + G +F I G+P ++AP
Sbjct: 128 VHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAP 187
Query: 254 EVLRRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
E++ NY P E D+WS GVI YILL G PF ET++ I DF+ + +
Sbjct: 188 EIV--NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNT 245
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
S+ AK+ ++ +L +P R+ + + LE+ WIK
Sbjct: 246 SELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 277
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 156/272 (57%), Gaps = 10/272 (3%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEI 134
N+ D Y G+ELG G+F + +C E TG YA K I K + K+ + +D+ REV I
Sbjct: 7 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 66
Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
++ + +HPN++T E YE+K + L++EL GGELFD + K TE A K IL
Sbjct: 67 LKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 125
Query: 195 VKVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAP 253
V H + H DLKPEN + D + ++K IDFGL+ G +F I G+P ++AP
Sbjct: 126 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 185
Query: 254 EVLRRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
E++ NY P E D+WS GVI YILL G PF +T++ + +FE + +
Sbjct: 186 EIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 243
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
S AK+ ++ +L +P R+T+++ L++PWIK
Sbjct: 244 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 156/272 (57%), Gaps = 10/272 (3%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEI 134
N+ D Y G+ELG G+F + +C E TG YA K I K + K+ + +D+ REV I
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
++ + +HPN++T E YE+K + L++EL GGELFD + K TE A K IL
Sbjct: 68 LKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 195 VKVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAP 253
V H + H DLKPEN + D + ++K IDFGL+ G +F I G+P ++AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 254 EVLRRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
E++ NY P E D+WS GVI YILL G PF +T++ + +FE + +
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
S AK+ ++ +L +P R+T+++ L++PWIK
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 103/269 (38%), Positives = 155/269 (57%), Gaps = 10/269 (3%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEIMRH 137
D Y G+ELG G+F I +C + TG+ YA K I K +L + + +++ REV I+R
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
+ +HPNI+T + +E+K + L++EL GGELFD + K TE A K IL V
Sbjct: 86 I-RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHY 144
Query: 198 CHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
H + H DLKPEN + D + N ++K IDFG++ + G +F I G+P ++APE++
Sbjct: 145 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV 204
Query: 257 RRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
NY P E D+WS GVI YILL G PF ET++ I DF+ + + S+
Sbjct: 205 --NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSEL 262
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPWIK 342
AK+ ++ +L +P R+ + + LE+ WIK
Sbjct: 263 AKDFIRRLLVKDPKRRMXIAQSLEHSWIK 291
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 156/272 (57%), Gaps = 10/272 (3%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEI 134
N+ D Y G+ELG G+F + +C E TG YA K I K + K+ + +D+ REV I
Sbjct: 8 NVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
++ + +HPN++T E YE+K + L++EL GGELFD + K TE A K IL
Sbjct: 68 LKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 195 VKVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAP 253
V H + H DLKPEN + D + ++K IDFGL+ G +F I G+P ++AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 254 EVLRRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
E++ NY P E D+WS GVI YILL G PF +T++ + +FE + +
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
S AK+ ++ +L +P R+T+++ L++PWIK
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 156/272 (57%), Gaps = 10/272 (3%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEI 134
N+ D Y G+ELG G+F + +C E TG YA K I K + K+ + +D+ REV I
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
++ + +HPN++T E YE+K + L++EL GGELFD + K TE A K IL
Sbjct: 68 LKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 195 VKVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAP 253
V H + H DLKPEN + D + ++K IDFGL+ G +F I G+P ++AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 254 EVLRRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
E++ NY P E D+WS GVI YILL G PF +T++ + +FE + +
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
S AK+ ++ +L +P R+T+++ L++PWIK
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/281 (34%), Positives = 153/281 (54%), Gaps = 17/281 (6%)
Query: 75 AEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACK--KIAKEKLKTEIDIDDVR--- 129
A KY +GRG + +C TG +A K ++ E+L E +++VR
Sbjct: 88 AAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPE-QLEEVREAT 146
Query: 130 -REVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVG 188
RE I+R + HP+I+T ++YE ++LV +L GELFD + K +E+ ++
Sbjct: 147 RRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIM 206
Query: 189 KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP 248
+++L V H N ++HRDLKPEN L D N Q++ DFG S +PGE+ E+ G+P
Sbjct: 207 RSLLEAVSFLHANNIVHRDLKPENILLDD---NMQIRLSDFGFSCHLEPGEKLRELCGTP 263
Query: 249 YYMAPEVLR-------RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID 301
Y+APE+L+ YG E+D+W+ GVI++ LL G PPFW + + I+ G+
Sbjct: 264 GYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQ 323
Query: 302 FERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
F W S K+L+ +L +P RLT E+ L++P+ +
Sbjct: 324 FSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE 364
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 155/272 (56%), Gaps = 10/272 (3%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEI 134
N+ D Y G+ELG G F + +C E TG YA K I K + K+ + +D+ REV I
Sbjct: 8 NVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
++ + +HPN++T E YE+K + L++EL GGELFD + K TE A K IL
Sbjct: 68 LKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 195 VKVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAP 253
V H + H DLKPEN + D + ++K IDFGL+ G +F I G+P ++AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 254 EVLRRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
E++ NY P E D+WS GVI YILL G PF +T++ + +FE + +
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
S AK+ ++ +L +P R+T+++ L++PWIK
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 155/272 (56%), Gaps = 10/272 (3%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEI 134
N+ D Y G+ELG G+F + +C E TG YA K I K + K+ + +D+ REV I
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
++ + +HPN++T E YE+K + L+ EL GGELFD + K TE A K IL
Sbjct: 68 LKEI-QHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 195 VKVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAP 253
V H + H DLKPEN + D + ++K IDFGL+ G +F I G+P ++AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 254 EVLRRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
E++ NY P E D+WS GVI YILL G PF +T++ + +FE + +
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
S AK+ ++ +L +P R+T+++ L++PWIK
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/309 (34%), Positives = 171/309 (55%), Gaps = 12/309 (3%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACK--KIAKEKLKTEIDIDDVRREVEIMRHL 138
D Y + +G+G F + +C ETG+ +A K +AK + +D++RE I H+
Sbjct: 26 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASIC-HM 84
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH----YTERAAAAVGKTILRI 194
KHP+IV E Y +Y+V E +G +L IV + Y+E A+ + IL
Sbjct: 85 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 144
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSPYYMAP 253
++ CH+N ++HRD+KP L A ++ +K FG++I + G VG+P++MAP
Sbjct: 145 LRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAP 204
Query: 254 EVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSK 312
EV++R YG +DVW GVI++ILL G PF+ T+E + II+GK W +S+
Sbjct: 205 EVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISE 263
Query: 313 EAKELVKNMLDPNPYNRLTLEEVLENPWIK-NDNHAPNVSLGGNVTSRIKQFSIMNKFKK 371
AK+LV+ ML +P R+T+ E L +PW+K D +A + L V ++++F+ K K
Sbjct: 264 SAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETV-EQLRKFNARRKLKG 322
Query: 372 KVLRVVADN 380
VL V+ +
Sbjct: 323 AVLAAVSSH 331
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 171/309 (55%), Gaps = 12/309 (3%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE--IDIDDVRREVEIMRHL 138
D Y + +G+G F + +C ETG+ +A K + K + + +D++RE I H+
Sbjct: 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASIC-HM 82
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH----YTERAAAAVGKTILRI 194
KHP+IV E Y +Y+V E +G +L IV + Y+E A+ + IL
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSPYYMAP 253
++ CH+N ++HRD+KP L A ++ +K FG++I + G VG+P++MAP
Sbjct: 143 LRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAP 202
Query: 254 EVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSK 312
EV++R YG +DVW GVI++ILL G PF+ T+E + II+GK W +S+
Sbjct: 203 EVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISE 261
Query: 313 EAKELVKNMLDPNPYNRLTLEEVLENPWIK-NDNHAPNVSLGGNVTSRIKQFSIMNKFKK 371
AK+LV+ ML +P R+T+ E L +PW+K D +A + L V ++++F+ K K
Sbjct: 262 SAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETV-EQLRKFNARRKLKG 320
Query: 372 KVLRVVADN 380
VL V+ +
Sbjct: 321 AVLAAVSSH 329
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/268 (38%), Positives = 151/268 (56%), Gaps = 10/268 (3%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEIMRH 137
D Y G+ELG G+F I +C E TG YA K I K + + + +++ REV I+R
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQ 71
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
+ HPNI+T + YE++ + L++EL GGELFD + K +E A + K IL V
Sbjct: 72 VL-HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNY 130
Query: 198 CHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
H + H DLKPEN + D + +K IDFGL+ + G +F I G+P ++APE++
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 257 RRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
NY P E D+WS GVI YILL G PF +T++ I DF+ + + + S+
Sbjct: 191 --NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSEL 248
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPWI 341
AK+ ++ +L RLT++E L +PWI
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 178 bits (451), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 100/268 (37%), Positives = 150/268 (55%), Gaps = 10/268 (3%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEIMRH 137
D Y G+ELG G+F I +C E TG YA K I K + + + +++ REV I+R
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
+ H N++T + YE++ + L++EL GGELFD + K +E A + K IL V
Sbjct: 72 VLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNY 130
Query: 198 CHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
H + H DLKPEN + D + +K IDFGL+ + G +F I G+P ++APE++
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 257 RRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
NY P E D+WS GVI YILL G PF +T++ I DF+ + + + S+
Sbjct: 191 --NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSEL 248
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPWI 341
AK+ ++ +L RLT++E L +PWI
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/268 (37%), Positives = 149/268 (55%), Gaps = 10/268 (3%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEIMRH 137
D Y G+ELG G+F I +C E TG YA K I K + + + +++ REV I+R
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
+ H N++T + YE++ + L++EL GGELFD + K +E A + K IL V
Sbjct: 72 VLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNY 130
Query: 198 CHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
H + H DLKPEN + D + +K IDFGL+ + G +F I G+P ++APE++
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 257 RRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
NY P E D+WS GVI YILL G PF +T++ I DF+ + + S+
Sbjct: 191 --NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSEL 248
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPWI 341
AK+ ++ +L RLT++E L +PWI
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/268 (37%), Positives = 150/268 (55%), Gaps = 10/268 (3%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEIMRH 137
D Y G+ELG G+F I +C E TG YA K I K + + + +++ REV I+R
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
+ H N++T + YE++ + L++EL GGELFD + K +E A + K IL V
Sbjct: 72 VLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNY 130
Query: 198 CHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
H + H DLKPEN + D + +K IDFGL+ + G +F I G+P ++APE++
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 257 RRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
NY P E D+WS GVI YILL G PF +T++ I DF+ + + + S+
Sbjct: 191 --NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSEL 248
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPWI 341
AK+ ++ +L RLT++E L +PWI
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/281 (37%), Positives = 150/281 (53%), Gaps = 19/281 (6%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
D Y + +G G + +C T YA K I K K D E+EI+ +
Sbjct: 27 DGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK-------RDPSEEIEILLRYGQ 79
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
HPNI+T K+ Y+D +YLV EL GGEL D+I+ + ++ER A+ V TI + V+ H
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHS 139
Query: 201 NGVMHRDLKPENFLFADGSENSQ-LKAIDFGLSIFFKPGEQFCEIVGSPYY----MAPEV 255
GV+HRDLKP N L+ D S N + L+ DFG F K ++ +P Y +APEV
Sbjct: 140 QGVVHRDLKPSNILYVDESGNPECLRICDFG---FAKQLRAENGLLMTPCYTANFVAPEV 196
Query: 256 LRRN-YGPEIDVWSAGVIIYILLCGVPPFW---AETEEGIAHAIIRGKIDFERDPWPKVS 311
L+R Y D+WS G+++Y +L G PF ++T E I I GK W VS
Sbjct: 197 LKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVS 256
Query: 312 KEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSL 352
+ AK+LV ML +P+ RLT ++VL++PW+ + P L
Sbjct: 257 ETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQSQL 297
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/281 (37%), Positives = 150/281 (53%), Gaps = 19/281 (6%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
D Y + +G G + +C T YA K I K K D E+EI+ +
Sbjct: 27 DGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK-------RDPSEEIEILLRYGQ 79
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
HPNI+T K+ Y+D +YLV EL GGEL D+I+ + ++ER A+ V TI + V+ H
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHS 139
Query: 201 NGVMHRDLKPENFLFADGSENSQ-LKAIDFGLSIFFKPGEQFCEIVGSPYY----MAPEV 255
GV+HRDLKP N L+ D S N + L+ DFG F K ++ +P Y +APEV
Sbjct: 140 QGVVHRDLKPSNILYVDESGNPECLRICDFG---FAKQLRAENGLLMTPCYTANFVAPEV 196
Query: 256 LRRN-YGPEIDVWSAGVIIYILLCGVPPFW---AETEEGIAHAIIRGKIDFERDPWPKVS 311
L+R Y D+WS G+++Y +L G PF ++T E I I GK W VS
Sbjct: 197 LKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVS 256
Query: 312 KEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSL 352
+ AK+LV ML +P+ RLT ++VL++PW+ + P L
Sbjct: 257 ETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQSQL 297
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/268 (37%), Positives = 149/268 (55%), Gaps = 10/268 (3%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEIMRH 137
D Y G+ELG G+F I +C E TG YA K I K + + + +++ REV I+R
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
+ H N++T + YE++ + L++EL GGELFD + K +E A + K IL V
Sbjct: 72 VLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNY 130
Query: 198 CHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
H + H DLKPEN + D + +K IDFGL+ + G +F I G+P ++APE++
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 257 RRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
NY P E D+WS GVI YILL G PF +T++ I DF+ + + S+
Sbjct: 191 --NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSEL 248
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPWI 341
AK+ ++ +L RLT++E L +PWI
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/268 (37%), Positives = 149/268 (55%), Gaps = 10/268 (3%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEIMRH 137
D Y G+ELG G+F I +C E TG YA K I K + + + +++ REV I+R
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
+ H N++T + YE++ + L++EL GGELFD + K +E A + K IL V
Sbjct: 72 VLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNY 130
Query: 198 CHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
H + H DLKPEN + D + +K IDFGL+ + G +F I G+P ++APE++
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 257 RRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
NY P E D+WS GVI YILL G PF +T++ I DF+ + + S+
Sbjct: 191 --NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSEL 248
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPWI 341
AK+ ++ +L RLT++E L +PWI
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/272 (36%), Positives = 154/272 (56%), Gaps = 8/272 (2%)
Query: 76 EGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIM 135
+G I D + F ++LG G FG H E +G K I K++ +++ ++ + E+E++
Sbjct: 17 QGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR--SQVPMEQIEAEIEVL 74
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVN---KGH-YTERAAAAVGKTI 191
+ L HPNI+ E +ED +Y+VME CEGGEL +RIV+ +G +E A + K +
Sbjct: 75 KSL-DHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQM 133
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
+ + H V+H+DLKPEN LF D S +S +K IDFGL+ FK E G+ YM
Sbjct: 134 MNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYM 193
Query: 252 APEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS 311
APEV +R+ + D+WSAGV++Y LL G PF + E + + ++ + P ++
Sbjct: 194 APEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRP-LT 252
Query: 312 KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
+A +L+K ML +P R + +VL + W K
Sbjct: 253 PQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ 284
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 111/328 (33%), Positives = 170/328 (51%), Gaps = 20/328 (6%)
Query: 68 RSVVSNPAE---GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID 124
+ V P E G++ D Y +ELG G FG+ H+C E TG + K I +D
Sbjct: 35 KKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFI---NTPYPLD 91
Query: 125 IDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH-YTERA 183
V+ E+ IM L HP ++ +A+EDK + L++E GGELFDRI + + +E
Sbjct: 92 KYTVKNEISIMNQL-HHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAE 150
Query: 184 AAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE 243
+ +K HE+ ++H D+KPEN + + + S +K IDFGL+ P E
Sbjct: 151 VINYMRQACEGLKHMHEHSIVHLDIKPENIM-CETKKASSVKIIDFGLATKLNPDEIVKV 209
Query: 244 IVGSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDF 302
+ + APE++ R G D+W+ GV+ Y+LL G+ PF E + + R +F
Sbjct: 210 TTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEF 269
Query: 303 ERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQ 362
+ D + VS EAK+ +KN+L P RLT+ + LE+PW+K D+ N+TSRI
Sbjct: 270 DEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDH--------SNLTSRIPS 321
Query: 363 FSIMNKFKKKVLRVVAD-NLPQDQMAQI 389
S NK ++K+ AD PQ + +I
Sbjct: 322 -SRYNKIRQKIKEKYADWPAPQPAIGRI 348
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 175 bits (443), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 105/281 (37%), Positives = 150/281 (53%), Gaps = 19/281 (6%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
D Y +++G G + + +C T +A K I K K D E+EI+ +
Sbjct: 22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK-------RDPTEEIEILLRYGQ 74
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
HPNI+T K+ Y+D +Y+V EL +GGEL D+I+ + ++ER A+AV TI + V+ H
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHA 134
Query: 201 NGVMHRDLKPENFLFADGSENSQ-LKAIDFGLSIFFKPGEQFCEIVGSPYY----MAPEV 255
GV+HRDLKP N L+ D S N + ++ DFG F K ++ +P Y +APEV
Sbjct: 135 QGVVHRDLKPSNILYVDESGNPESIRICDFG---FAKQLRAENGLLMTPCYTANFVAPEV 191
Query: 256 L-RRNYGPEIDVWSAGVIIYILLCGVPPFWA---ETEEGIAHAIIRGKIDFERDPWPKVS 311
L R+ Y D+WS GV++Y +L G PF +T E I I GK W VS
Sbjct: 192 LERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVS 251
Query: 312 KEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSL 352
AK+LV ML +P+ RLT VL +PWI + + P L
Sbjct: 252 DTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQYQL 292
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 165/305 (54%), Gaps = 25/305 (8%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
K LG G F I +C ++ + +A K I+K + E + ++E+ ++ HPNIV
Sbjct: 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISK---RMEAN---TQKEITALKLCEGHPNIVK 70
Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
E + D+ +LVMEL GGELF+RI K H++E A+ + + ++ V H+ GV+HR
Sbjct: 71 LHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHR 130
Query: 207 DLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI-VGSPYYMAPEVLRRN-YGPEI 264
DLKPEN LF D ++N ++K IDFG + P Q + + +Y APE+L +N Y
Sbjct: 131 DLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESC 190
Query: 265 DVWSAGVIIYILLCGVPPFWAETEE-------GIAHAIIRGKIDFERDPWPKVSKEAKEL 317
D+WS GVI+Y +L G PF + I I +G FE + W VS+EAK+L
Sbjct: 191 DLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDL 250
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNH-------APNV--SLGGNVTSRIK-QFSIMN 367
++ +L +P RL + + N W+++ + P++ S G V + +K F N
Sbjct: 251 IQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLMTPDILGSSGAAVHTCVKATFHAFN 310
Query: 368 KFKKK 372
K+K++
Sbjct: 311 KYKRE 315
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 149/294 (50%), Gaps = 23/294 (7%)
Query: 79 ILDKYTFGKE-LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
I+D Y + LG G G Q F T E +A K + D RREVE+
Sbjct: 13 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWR 64
Query: 138 LPKHPNIV----TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKTI 191
+ P+IV Y+ Y + + +VME +GGELF RI ++G +TER A+ + K+I
Sbjct: 65 ASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 124
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
++ H + HRD+KPEN L+ N+ LK DFG + E +PYY+
Sbjct: 125 GEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYV 184
Query: 252 APEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAE----TEEGIAHAIIRGKIDFERDP 306
APEVL Y D+WS GVI+YILLCG PPF++ G+ I G+ +F
Sbjct: 185 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 244
Query: 307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRI 360
W +VS+E K L++N+L P R+T+ E + +PWI P L TSR+
Sbjct: 245 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH---TSRV 295
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 148/294 (50%), Gaps = 23/294 (7%)
Query: 79 ILDKYTFGKE-LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
I+D Y + LG G G Q F T E +A K + D RREVE+
Sbjct: 59 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWR 110
Query: 138 LPKHPNIV----TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKTI 191
+ P+IV Y+ Y + + +VME +GGELF RI ++G +TER A+ + K+I
Sbjct: 111 ASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 170
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
++ H + HRD+KPEN L+ N+ LK DFG + +PYY+
Sbjct: 171 GEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYV 230
Query: 252 APEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAE----TEEGIAHAIIRGKIDFERDP 306
APEVL Y D+WS GVI+YILLCG PPF++ G+ I G+ +F
Sbjct: 231 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 290
Query: 307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRI 360
W +VS+E K L++N+L P R+T+ E + +PWI P L TSR+
Sbjct: 291 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH---TSRV 341
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 148/294 (50%), Gaps = 23/294 (7%)
Query: 79 ILDKYTFGKE-LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
I+D Y + LG G G Q F T E +A K + D RREVE+
Sbjct: 65 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWR 116
Query: 138 LPKHPNIV----TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKTI 191
+ P+IV Y+ Y + + +VME +GGELF RI ++G +TER A+ + K+I
Sbjct: 117 ASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 176
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
++ H + HRD+KPEN L+ N+ LK DFG + +PYY+
Sbjct: 177 GEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYV 236
Query: 252 APEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAE----TEEGIAHAIIRGKIDFERDP 306
APEVL Y D+WS GVI+YILLCG PPF++ G+ I G+ +F
Sbjct: 237 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 296
Query: 307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRI 360
W +VS+E K L++N+L P R+T+ E + +PWI P L TSR+
Sbjct: 297 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH---TSRV 347
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 148/294 (50%), Gaps = 23/294 (7%)
Query: 79 ILDKYTFGKE-LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
I+D Y + LG G G Q F T E +A K + D RREVE+
Sbjct: 29 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWR 80
Query: 138 LPKHPNIV----TYKEAYEDKDAIYLVMELCEGGELFDRIVNKG--HYTERAAAAVGKTI 191
+ P+IV Y+ Y + + +VME +GGELF RI ++G +TER A+ + K+I
Sbjct: 81 ASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 140
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
++ H + HRD+KPEN L+ N+ LK DFG + +PYY+
Sbjct: 141 GEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYV 200
Query: 252 APEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAE----TEEGIAHAIIRGKIDFERDP 306
APEVL Y D+WS GVI+YILLCG PPF++ G+ I G+ +F
Sbjct: 201 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 260
Query: 307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRI 360
W +VS+E K L++N+L P R+T+ E + +PWI P L TSR+
Sbjct: 261 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH---TSRV 311
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 148/294 (50%), Gaps = 23/294 (7%)
Query: 79 ILDKYTFGKE-LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
I+D Y + LG G G Q F T E +A K + D RREVE+
Sbjct: 20 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWR 71
Query: 138 LPKHPNIV----TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKTI 191
+ P+IV Y+ Y + + +VME +GGELF RI ++G +TER A+ + K+I
Sbjct: 72 ASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 131
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
++ H + HRD+KPEN L+ N+ LK DFG + +PYY+
Sbjct: 132 GEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYV 191
Query: 252 APEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAE----TEEGIAHAIIRGKIDFERDP 306
APEVL Y D+WS GVI+YILLCG PPF++ G+ I G+ +F
Sbjct: 192 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 251
Query: 307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRI 360
W +VS+E K L++N+L P R+T+ E + +PWI P L TSR+
Sbjct: 252 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH---TSRV 302
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 171 bits (434), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 148/294 (50%), Gaps = 23/294 (7%)
Query: 79 ILDKYTFGKE-LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
I+D Y + LG G G Q F T E +A K + D RREVE+
Sbjct: 15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWR 66
Query: 138 LPKHPNIV----TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKTI 191
+ P+IV Y+ Y + + +VME +GGELF RI ++G +TER A+ + K+I
Sbjct: 67 ASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 126
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
++ H + HRD+KPEN L+ N+ LK DFG + +PYY+
Sbjct: 127 GEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYV 186
Query: 252 APEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAE----TEEGIAHAIIRGKIDFERDP 306
APEVL Y D+WS GVI+YILLCG PPF++ G+ I G+ +F
Sbjct: 187 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 246
Query: 307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRI 360
W +VS+E K L++N+L P R+T+ E + +PWI P L TSR+
Sbjct: 247 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH---TSRV 297
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 171 bits (434), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 148/294 (50%), Gaps = 23/294 (7%)
Query: 79 ILDKYTFGKE-LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
I+D Y + LG G G Q F T E +A K + D RREVE+
Sbjct: 19 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWR 70
Query: 138 LPKHPNIV----TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKTI 191
+ P+IV Y+ Y + + +VME +GGELF RI ++G +TER A+ + K+I
Sbjct: 71 ASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 130
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
++ H + HRD+KPEN L+ N+ LK DFG + +PYY+
Sbjct: 131 GEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYV 190
Query: 252 APEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAE----TEEGIAHAIIRGKIDFERDP 306
APEVL Y D+WS GVI+YILLCG PPF++ G+ I G+ +F
Sbjct: 191 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 250
Query: 307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRI 360
W +VS+E K L++N+L P R+T+ E + +PWI P L TSR+
Sbjct: 251 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH---TSRV 301
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 171 bits (434), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 148/294 (50%), Gaps = 23/294 (7%)
Query: 79 ILDKYTFGKE-LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
I+D Y + LG G G Q F T E +A K + D RREVE+
Sbjct: 13 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWR 64
Query: 138 LPKHPNIV----TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKTI 191
+ P+IV Y+ Y + + +VME +GGELF RI ++G +TER A+ + K+I
Sbjct: 65 ASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 124
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
++ H + HRD+KPEN L+ N+ LK DFG + +PYY+
Sbjct: 125 GEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYV 184
Query: 252 APEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAE----TEEGIAHAIIRGKIDFERDP 306
APEVL Y D+WS GVI+YILLCG PPF++ G+ I G+ +F
Sbjct: 185 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 244
Query: 307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRI 360
W +VS+E K L++N+L P R+T+ E + +PWI P L TSR+
Sbjct: 245 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH---TSRV 295
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 171 bits (434), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 148/294 (50%), Gaps = 23/294 (7%)
Query: 79 ILDKYTFGKE-LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
I+D Y + LG G G Q F T E +A K + D RREVE+
Sbjct: 15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWR 66
Query: 138 LPKHPNIV----TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKTI 191
+ P+IV Y+ Y + + +VME +GGELF RI ++G +TER A+ + K+I
Sbjct: 67 ASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 126
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
++ H + HRD+KPEN L+ N+ LK DFG + +PYY+
Sbjct: 127 GEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYV 186
Query: 252 APEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAE----TEEGIAHAIIRGKIDFERDP 306
APEVL Y D+WS GVI+YILLCG PPF++ G+ I G+ +F
Sbjct: 187 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 246
Query: 307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRI 360
W +VS+E K L++N+L P R+T+ E + +PWI P L TSR+
Sbjct: 247 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH---TSRV 297
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 171 bits (434), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 148/294 (50%), Gaps = 23/294 (7%)
Query: 79 ILDKYTFGKE-LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
I+D Y + LG G G Q F T E +A K + D RREVE+
Sbjct: 21 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWR 72
Query: 138 LPKHPNIV----TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKTI 191
+ P+IV Y+ Y + + +VME +GGELF RI ++G +TER A+ + K+I
Sbjct: 73 ASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 132
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
++ H + HRD+KPEN L+ N+ LK DFG + +PYY+
Sbjct: 133 GEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYV 192
Query: 252 APEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAE----TEEGIAHAIIRGKIDFERDP 306
APEVL Y D+WS GVI+YILLCG PPF++ G+ I G+ +F
Sbjct: 193 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 252
Query: 307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRI 360
W +VS+E K L++N+L P R+T+ E + +PWI P L TSR+
Sbjct: 253 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH---TSRV 303
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 171 bits (434), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 148/294 (50%), Gaps = 23/294 (7%)
Query: 79 ILDKYTFGKE-LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
I+D Y + LG G G Q F T E +A K + D RREVE+
Sbjct: 14 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWR 65
Query: 138 LPKHPNIV----TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKTI 191
+ P+IV Y+ Y + + +VME +GGELF RI ++G +TER A+ + K+I
Sbjct: 66 ASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 125
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
++ H + HRD+KPEN L+ N+ LK DFG + +PYY+
Sbjct: 126 GEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYV 185
Query: 252 APEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAE----TEEGIAHAIIRGKIDFERDP 306
APEVL Y D+WS GVI+YILLCG PPF++ G+ I G+ +F
Sbjct: 186 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 245
Query: 307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRI 360
W +VS+E K L++N+L P R+T+ E + +PWI P L TSR+
Sbjct: 246 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH---TSRV 296
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/281 (37%), Positives = 148/281 (52%), Gaps = 19/281 (6%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
D Y +++G G + + +C T +A K I K K D E+EI+ +
Sbjct: 22 DGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSK-------RDPTEEIEILLRYGQ 74
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
HPNI+T K+ Y+D +Y+V EL +GGEL D+I+ + ++ER A+AV TI + V+ H
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHA 134
Query: 201 NGVMHRDLKPENFLFADGSENSQ-LKAIDFGLSIFFKPGEQFCEIVGSPYY----MAPEV 255
GV+HRDLKP N L+ D S N + ++ DFG F K ++ +P Y +APEV
Sbjct: 135 QGVVHRDLKPSNILYVDESGNPESIRICDFG---FAKQLRAENGLLXTPCYTANFVAPEV 191
Query: 256 L-RRNYGPEIDVWSAGVIIYILLCGVPPFWA---ETEEGIAHAIIRGKIDFERDPWPKVS 311
L R+ Y D+WS GV++Y L G PF +T E I I GK W VS
Sbjct: 192 LERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVS 251
Query: 312 KEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSL 352
AK+LV L +P+ RLT VL +PWI + + P L
Sbjct: 252 DTAKDLVSKXLHVDPHQRLTAALVLRHPWIVHWDQLPQYQL 292
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/275 (37%), Positives = 148/275 (53%), Gaps = 12/275 (4%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKT----EIDID-DVRREVEIM 135
D+Y K LG G G FE +T + A K I+K K E D +V E+EI+
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV 195
+ L HP I+ K ++ +D Y+V+EL EGGELFD++V E +L V
Sbjct: 70 KKL-NHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV 127
Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV 255
+ HENG++HRDLKPEN L + E+ +K DFG S + G+P Y+APEV
Sbjct: 128 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEV 187
Query: 256 L----RRNYGPEIDVWSAGVIIYILLCGVPPFWA-ETEEGIAHAIIRGKIDFERDPWPKV 310
L Y +D WS GVI++I L G PPF T+ + I GK +F + W +V
Sbjct: 188 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 247
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN 345
S++A +LVK +L +P R T EE L +PW+++++
Sbjct: 248 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDED 282
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/275 (37%), Positives = 148/275 (53%), Gaps = 12/275 (4%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKT----EIDID-DVRREVEIM 135
D+Y K LG G G FE +T + A K I+K K E D +V E+EI+
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV 195
+ L HP I+ K ++ +D Y+V+EL EGGELFD++V E +L V
Sbjct: 70 KKL-NHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV 127
Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV 255
+ HENG++HRDLKPEN L + E+ +K DFG S + G+P Y+APEV
Sbjct: 128 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEV 187
Query: 256 L----RRNYGPEIDVWSAGVIIYILLCGVPPFWAE-TEEGIAHAIIRGKIDFERDPWPKV 310
L Y +D WS GVI++I L G PPF T+ + I GK +F + W +V
Sbjct: 188 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 247
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN 345
S++A +LVK +L +P R T EE L +PW+++++
Sbjct: 248 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDED 282
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/275 (37%), Positives = 148/275 (53%), Gaps = 12/275 (4%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKT----EIDID-DVRREVEIM 135
D+Y K LG G G FE +T + A K I+K K E D +V E+EI+
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV 195
+ L HP I+ K ++ +D Y+V+EL EGGELFD++V E +L V
Sbjct: 69 KKL-NHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV 126
Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV 255
+ HENG++HRDLKPEN L + E+ +K DFG S + G+P Y+APEV
Sbjct: 127 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEV 186
Query: 256 L----RRNYGPEIDVWSAGVIIYILLCGVPPFWA-ETEEGIAHAIIRGKIDFERDPWPKV 310
L Y +D WS GVI++I L G PPF T+ + I GK +F + W +V
Sbjct: 187 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 246
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN 345
S++A +LVK +L +P R T EE L +PW+++++
Sbjct: 247 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDED 281
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/275 (37%), Positives = 148/275 (53%), Gaps = 12/275 (4%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKT----EIDID-DVRREVEIM 135
D+Y K LG G G FE +T + A K I+K K E D +V E+EI+
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV 195
+ L HP I+ K ++ +D Y+V+EL EGGELFD++V E +L V
Sbjct: 70 KKL-NHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV 127
Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV 255
+ HENG++HRDLKPEN L + E+ +K DFG S + G+P Y+APEV
Sbjct: 128 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEV 187
Query: 256 L----RRNYGPEIDVWSAGVIIYILLCGVPPFWA-ETEEGIAHAIIRGKIDFERDPWPKV 310
L Y +D WS GVI++I L G PPF T+ + I GK +F + W +V
Sbjct: 188 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 247
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN 345
S++A +LVK +L +P R T EE L +PW+++++
Sbjct: 248 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDED 282
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/275 (37%), Positives = 148/275 (53%), Gaps = 12/275 (4%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKT----EIDID-DVRREVEIM 135
D+Y K LG G G FE +T + A K I+K K E D +V E+EI+
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV 195
+ L HP I+ K ++ +D Y+V+EL EGGELFD++V E +L V
Sbjct: 76 KKL-NHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV 133
Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV 255
+ HENG++HRDLKPEN L + E+ +K DFG S + G+P Y+APEV
Sbjct: 134 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEV 193
Query: 256 L----RRNYGPEIDVWSAGVIIYILLCGVPPFWAE-TEEGIAHAIIRGKIDFERDPWPKV 310
L Y +D WS GVI++I L G PPF T+ + I GK +F + W +V
Sbjct: 194 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 253
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN 345
S++A +LVK +L +P R T EE L +PW+++++
Sbjct: 254 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDED 288
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 102/275 (37%), Positives = 148/275 (53%), Gaps = 12/275 (4%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKT----EIDID-DVRREVEIM 135
D+Y K LG G G FE +T + A + I+K K E D +V E+EI+
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 208
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV 195
+ L HP I+ K ++ +D Y+V+EL EGGELFD++V E +L V
Sbjct: 209 KKL-NHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV 266
Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV 255
+ HENG++HRDLKPEN L + E+ +K DFG S + G+P Y+APEV
Sbjct: 267 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEV 326
Query: 256 L----RRNYGPEIDVWSAGVIIYILLCGVPPFWAE-TEEGIAHAIIRGKIDFERDPWPKV 310
L Y +D WS GVI++I L G PPF T+ + I GK +F + W +V
Sbjct: 327 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 386
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN 345
S++A +LVK +L +P R T EE L +PW+++++
Sbjct: 387 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDED 421
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 168 bits (426), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 93/269 (34%), Positives = 138/269 (51%), Gaps = 18/269 (6%)
Query: 89 LGRGEFGITHQCFEIETGETYACKKI---AKEKLKTEIDIDDVR----REVEIMRHLPKH 141
LGRG + +C T + YA K I E ++ ++R +EV+I+R + H
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAE-EVQELREATLKEVDILRKVSGH 83
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
PNI+ K+ YE +LV +L + GELFD + K +E+ + + +L ++ H+
Sbjct: 84 PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL 143
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL----- 256
++HRDLKPEN L D + +K DFG S PGE+ E+ G+P Y+APE++
Sbjct: 144 NIVHRDLKPENILLDD---DMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMN 200
Query: 257 --RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
YG E+D+WS GVI+Y LL G PPFW + + I+ G F W S
Sbjct: 201 DNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTV 260
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
K+LV L P R T EE L +P+ +
Sbjct: 261 KDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 168 bits (425), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 93/269 (34%), Positives = 138/269 (51%), Gaps = 18/269 (6%)
Query: 89 LGRGEFGITHQCFEIETGETYACKKI---AKEKLKTEIDIDDVR----REVEIMRHLPKH 141
LGRG + +C T + YA K I E ++ ++R +EV+I+R + H
Sbjct: 12 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAE-EVQELREATLKEVDILRKVSGH 70
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
PNI+ K+ YE +LV +L + GELFD + K +E+ + + +L ++ H+
Sbjct: 71 PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL 130
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL----- 256
++HRDLKPEN L D + +K DFG S PGE+ E+ G+P Y+APE++
Sbjct: 131 NIVHRDLKPENILLDD---DMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMN 187
Query: 257 --RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
YG E+D+WS GVI+Y LL G PPFW + + I+ G F W S
Sbjct: 188 DNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTV 247
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
K+LV L P R T EE L +P+ +
Sbjct: 248 KDLVSRFLVVQPQKRYTAEEALAHPFFQQ 276
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 168 bits (425), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 102/275 (37%), Positives = 148/275 (53%), Gaps = 12/275 (4%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKT----EIDID-DVRREVEIM 135
D+Y K LG G G FE +T + A + I+K K E D +V E+EI+
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV 195
+ L HP I+ K ++ +D Y+V+EL EGGELFD++V E +L V
Sbjct: 195 KKL-NHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV 252
Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV 255
+ HENG++HRDLKPEN L + E+ +K DFG S + G+P Y+APEV
Sbjct: 253 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEV 312
Query: 256 L----RRNYGPEIDVWSAGVIIYILLCGVPPFWAE-TEEGIAHAIIRGKIDFERDPWPKV 310
L Y +D WS GVI++I L G PPF T+ + I GK +F + W +V
Sbjct: 313 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 372
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN 345
S++A +LVK +L +P R T EE L +PW+++++
Sbjct: 373 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDED 407
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/303 (35%), Positives = 157/303 (51%), Gaps = 28/303 (9%)
Query: 74 PAEGNILDKYTFGKE-LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREV 132
P + + D Y K+ LG G G +CF TG+ A LK D R+EV
Sbjct: 21 PKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCA--------LKLLYDSPKARQEV 72
Query: 133 EIMRHLPKHPNIVTYKEAYED----KDAIYLVMELCEGGELFDRIVNKGH--YTERAAAA 186
+ P+IV + YE+ K + ++ME EGGELF RI +G +TER AA
Sbjct: 73 DHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAE 132
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ--FCEI 244
+ + I ++ H + + HRD+KPEN L+ +++ LK DFG F K Q
Sbjct: 133 IMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFG---FAKETTQNALQTP 189
Query: 245 VGSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIR----GK 299
+PYY+APEVL Y D+WS GVI+YILLCG PPF++ T + I+ + R G+
Sbjct: 190 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQ 249
Query: 300 IDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSR 359
F W +VS++AK+L++ +L +P RLT+ + + +PWI P L T+R
Sbjct: 250 YGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLH---TAR 306
Query: 360 IKQ 362
+ Q
Sbjct: 307 VLQ 309
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/303 (35%), Positives = 157/303 (51%), Gaps = 28/303 (9%)
Query: 74 PAEGNILDKYTFGKE-LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREV 132
P + + D Y K+ LG G G +CF TG+ A LK D R+EV
Sbjct: 2 PKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCA--------LKLLYDSPKARQEV 53
Query: 133 EIMRHLPKHPNIVTYKEAYED----KDAIYLVMELCEGGELFDRIVNKGH--YTERAAAA 186
+ P+IV + YE+ K + ++ME EGGELF RI +G +TER AA
Sbjct: 54 DHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAE 113
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ--FCEI 244
+ + I ++ H + + HRD+KPEN L+ +++ LK DFG F K Q
Sbjct: 114 IMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFG---FAKETTQNALQTP 170
Query: 245 VGSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIR----GK 299
+PYY+APEVL Y D+WS GVI+YILLCG PPF++ T + I+ + R G+
Sbjct: 171 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQ 230
Query: 300 IDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSR 359
F W +VS++AK+L++ +L +P RLT+ + + +PWI P L T+R
Sbjct: 231 YGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLH---TAR 287
Query: 360 IKQ 362
+ Q
Sbjct: 288 VLQ 290
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 137/269 (50%), Gaps = 18/269 (6%)
Query: 89 LGRGEFGITHQCFEIETGETYACKKI---AKEKLKTEIDIDDVR----REVEIMRHLPKH 141
LGRG + +C T + YA K I E ++ ++R +EV+I+R + H
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAE-EVQELREATLKEVDILRKVSGH 83
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
PNI+ K+ YE +LV +L + GELFD + K +E+ + + +L ++ H+
Sbjct: 84 PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL 143
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL----- 256
++HRDLKPEN L D + +K DFG S PGE+ + G+P Y+APE++
Sbjct: 144 NIVHRDLKPENILLDD---DMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMN 200
Query: 257 --RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
YG E+D+WS GVI+Y LL G PPFW + + I+ G F W S
Sbjct: 201 DNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTV 260
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
K+LV L P R T EE L +P+ +
Sbjct: 261 KDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 142/294 (48%), Gaps = 23/294 (7%)
Query: 79 ILDKYTFGKE-LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
I+D Y + LG G G Q F T E +A K + D RREVE+
Sbjct: 59 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXLQ--------DCPKARREVELHWR 110
Query: 138 LPKHPNIV----TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKTI 191
+ P+IV Y+ Y + + +V E +GGELF RI ++G +TER A+ + K+I
Sbjct: 111 ASQCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSI 170
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
++ H + HRD+KPEN L+ N+ LK DFG + +PYY+
Sbjct: 171 GEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYV 230
Query: 252 APEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAE----TEEGIAHAIIRGKIDFERDP 306
APEVL Y D WS GVI YILLCG PPF++ G I G+ +F
Sbjct: 231 APEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPE 290
Query: 307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRI 360
W +VS+E K L++N+L P R T+ E +PWI P L TSR+
Sbjct: 291 WSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQSTKVPQTPLH---TSRV 341
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/272 (35%), Positives = 152/272 (55%), Gaps = 9/272 (3%)
Query: 76 EGNILDKYTFGKE--LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVE 133
+G + YT K LG G FG H+C E TG A K I +K D ++V+ E+
Sbjct: 82 QGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMK---DKEEVKNEIS 138
Query: 134 IMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH-YTERAAAAVGKTIL 192
+M L H N++ +A+E K+ I LVME +GGELFDRI+++ + TE K I
Sbjct: 139 VMNQL-DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQIC 197
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMA 252
++ H+ ++H DLKPEN L + + Q+K IDFGL+ +KP E+ G+P ++A
Sbjct: 198 EGIRHMHQMYILHLDLKPENILCVN-RDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLA 256
Query: 253 PEVLRRNYGP-EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS 311
PEV+ ++ D+WS GVI Y+LL G+ PF + + + I+ + D E + + +S
Sbjct: 257 PEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDIS 316
Query: 312 KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
+EAKE + +L R++ E L++PW+ +
Sbjct: 317 EEAKEFISKLLIKEKSWRISASEALKHPWLSD 348
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/271 (38%), Positives = 148/271 (54%), Gaps = 15/271 (5%)
Query: 73 NPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREV 132
P GN Y K +G+G F I TG+ A + I K +L + + + REV
Sbjct: 10 QPHIGN----YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSS-SLQKLFREV 64
Query: 133 EIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL 192
IM+ L HPNIV E E + +YLVME GGE+FD +V G E+ A A + I+
Sbjct: 65 RIMKVL-NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV 123
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMA 252
V+ CH+ ++HRDLK EN L D N +K DFG S F G + E GSP Y A
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLL-DADMN--IKIADFGFSNEFTFGNKLDEFCGSPPYAA 180
Query: 253 PEVLR-RNY-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
PE+ + + Y GPE+DVWS GVI+Y L+ G PF + + + ++RGK R P+ +
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YM 236
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
S + + L+K L NP R TLE+++++ W+
Sbjct: 237 STDCENLLKKFLILNPSKRGTLEQIMKDRWM 267
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/285 (37%), Positives = 153/285 (53%), Gaps = 19/285 (6%)
Query: 73 NPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREV 132
P GN Y K +G+G F I TG+ A K I K +L + + + REV
Sbjct: 10 QPHIGN----YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSS-SLQKLFREV 64
Query: 133 EIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL 192
IM+ L HPNIV E E + +YLVME GGE+FD +V G E+ A A + I+
Sbjct: 65 RIMKVL-NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV 123
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMA 252
V+ CH+ ++HRDLK EN L D N +K DFG S F G + GSP Y A
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLL-DADMN--IKIADFGFSNEFTFGNKLDTFCGSPPYAA 180
Query: 253 PEVLR-RNY-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
PE+ + + Y GPE+DVWS GVI+Y L+ G PF + + + ++RGK R P+ +
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YM 236
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWI----KNDNHAPNVS 351
S + + L+K L NP R TLE+++++ W+ ++D P V+
Sbjct: 237 STDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVA 281
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/271 (38%), Positives = 147/271 (54%), Gaps = 15/271 (5%)
Query: 73 NPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREV 132
P GN Y K +G+G F I TG+ A K I K +L + + + REV
Sbjct: 10 QPHIGN----YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSS-SLQKLFREV 64
Query: 133 EIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL 192
IM+ L HPNIV E E + +YLVME GGE+FD +V G E+ A A + I+
Sbjct: 65 RIMKVL-NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV 123
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMA 252
V+ CH+ ++HRDLK EN L D N +K DFG S F G + GSP Y A
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLL-DADMN--IKIADFGFSNEFTFGNKLDTFCGSPPYAA 180
Query: 253 PEVLR-RNY-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
PE+ + + Y GPE+DVWS GVI+Y L+ G PF + + + ++RGK R P+ +
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YM 236
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
S + + L+K L NP R TLE+++++ W+
Sbjct: 237 STDCENLLKKFLILNPSKRGTLEQIMKDRWM 267
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/271 (38%), Positives = 147/271 (54%), Gaps = 15/271 (5%)
Query: 73 NPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREV 132
P GN Y K +G+G F I TG+ A + I K +L + + + REV
Sbjct: 10 QPHIGN----YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSS-SLQKLFREV 64
Query: 133 EIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL 192
IM+ L HPNIV E E + +YLVME GGE+FD +V G E+ A A + I+
Sbjct: 65 RIMKVL-NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV 123
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMA 252
V+ CH+ ++HRDLK EN L D N +K DFG S F G + GSP Y A
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLL-DADMN--IKIADFGFSNEFTFGNKLDTFCGSPPYAA 180
Query: 253 PEVLR-RNY-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
PE+ + + Y GPE+DVWS GVI+Y L+ G PF + + + ++RGK R P+ +
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YM 236
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
S + + L+K L NP R TLE+++++ W+
Sbjct: 237 STDCENLLKKFLILNPSKRGTLEQIMKDRWM 267
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 105/276 (38%), Positives = 147/276 (53%), Gaps = 16/276 (5%)
Query: 73 NPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREV 132
P GN Y K +G+G F I TG A K I K +L + + REV
Sbjct: 8 QPHIGN----YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREV 62
Query: 133 EIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL 192
IM+ L HPNIV E E + +YL+ME GGE+FD +V G E+ A + + I+
Sbjct: 63 RIMKIL-NHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIV 121
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMA 252
V+ CH+ ++HRDLK EN L D N +K DFG S F G + GSP Y A
Sbjct: 122 SAVQYCHQKRIVHRDLKAENLLL-DADMN--IKIADFGFSNEFTVGGKLDTFCGSPPYAA 178
Query: 253 PEVLR-RNY-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
PE+ + + Y GPE+DVWS GVI+Y L+ G PF + + + ++RGK R P+ +
Sbjct: 179 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YM 234
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNH 346
S + + L+K L NP R TLE+++++ WI N H
Sbjct: 235 STDCENLLKRFLVLNPIKRGTLEQIMKDRWI-NAGH 269
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 103/271 (38%), Positives = 147/271 (54%), Gaps = 15/271 (5%)
Query: 73 NPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREV 132
P GN Y K +G+G F I TG+ A K I K +L + + + REV
Sbjct: 10 QPHIGN----YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSS-SLQKLFREV 64
Query: 133 EIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL 192
IM+ L HPNIV E E + +YLVME GGE+FD +V G E+ A A + I+
Sbjct: 65 RIMKVL-NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV 123
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMA 252
V+ CH+ ++HRDLK EN L D N +K DFG S F G + G+P Y A
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLL-DADMN--IKIADFGFSNEFTFGNKLDAFCGAPPYAA 180
Query: 253 PEVLR-RNY-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
PE+ + + Y GPE+DVWS GVI+Y L+ G PF + + + ++RGK R P+ +
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YM 236
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
S + + L+K L NP R TLE+++++ W+
Sbjct: 237 STDCENLLKKFLILNPSKRGTLEQIMKDRWM 267
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 101/261 (38%), Positives = 144/261 (55%), Gaps = 11/261 (4%)
Query: 83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
Y K +G+G F I TG+ A K I K +L + + + REV IM+ L HP
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSS-SLQKLFREVRIMKVL-NHP 66
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
NIV E E + +YLVME GGE+FD +V G E+ A A + I+ V+ CH+
Sbjct: 67 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKF 126
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-RNY- 260
++HRDLK EN L D N +K DFG S F G + GSP Y APE+ + + Y
Sbjct: 127 IVHRDLKAENLLL-DADMN--IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYD 183
Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
GPE+DVWS GVI+Y L+ G PF + + + ++RGK R P+ +S + + L+K
Sbjct: 184 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YMSTDCENLLKK 239
Query: 321 MLDPNPYNRLTLEEVLENPWI 341
L NP R TLE+++++ W+
Sbjct: 240 FLILNPSKRGTLEQIMKDRWM 260
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 104/280 (37%), Positives = 149/280 (53%), Gaps = 12/280 (4%)
Query: 69 SVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDV 128
S+ S E + Y K +G+G F I TG A K I K +L + +
Sbjct: 3 SIASCADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKL 61
Query: 129 RREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVG 188
REV IM+ L HPNIV E E + +YL+ME GGE+FD +V G E+ A +
Sbjct: 62 FREVRIMKIL-NHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKF 120
Query: 189 KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP 248
+ I+ V+ CH+ ++HRDLK EN L D N +K DFG S F G + G+P
Sbjct: 121 RQIVSAVQYCHQKRIVHRDLKAENLLL-DADMN--IKIADFGFSNEFTVGGKLDAFCGAP 177
Query: 249 YYMAPEVLR-RNY-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDP 306
Y APE+ + + Y GPE+DVWS GVI+Y L+ G PF + + + ++RGK R P
Sbjct: 178 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIP 234
Query: 307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNH 346
+ +S + + L+K L NP R TLE+++++ WI N H
Sbjct: 235 F-YMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWI-NAGH 272
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 101/276 (36%), Positives = 145/276 (52%), Gaps = 13/276 (4%)
Query: 72 SNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
S+ A+G + Y K LG G FG + TG+ A K I K+ L + RE
Sbjct: 5 SSLADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIERE 64
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
+ +R L +HP+I+ + + KD I +V+E G ELFD IV + +E+ A + I
Sbjct: 65 ISYLR-LLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQI 122
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
+ V+ CH + ++HRDLKPEN L E+ +K DFGLS G GSP Y
Sbjct: 123 ISAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYA 179
Query: 252 APEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK 309
APEV+ + GPE+DVWS GVI+Y++LC PF E+ + I G PK
Sbjct: 180 APEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTL-----PK 234
Query: 310 -VSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND 344
+S A L+K ML NP NR+++ E++++ W K D
Sbjct: 235 FLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVD 270
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 158 bits (399), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 101/276 (36%), Positives = 145/276 (52%), Gaps = 13/276 (4%)
Query: 72 SNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
S+ A+G + Y K LG G FG + TG+ A K I K+ L + RE
Sbjct: 4 SSLADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIERE 63
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
+ +R L +HP+I+ + + KD I +V+E G ELFD IV + +E+ A + I
Sbjct: 64 ISYLR-LLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQI 121
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
+ V+ CH + ++HRDLKPEN L E+ +K DFGLS G GSP Y
Sbjct: 122 ISAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYA 178
Query: 252 APEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK 309
APEV+ + GPE+DVWS GVI+Y++LC PF E+ + I G PK
Sbjct: 179 APEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTL-----PK 233
Query: 310 -VSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND 344
+S A L+K ML NP NR+++ E++++ W K D
Sbjct: 234 FLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVD 269
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/273 (36%), Positives = 143/273 (52%), Gaps = 13/273 (4%)
Query: 75 AEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEI 134
A+G + Y K LG G FG + TG+ A K I K+ L + RE+
Sbjct: 2 ADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISY 61
Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
+R L +HP+I+ + + KD I +V+E G ELFD IV + +E+ A + I+
Sbjct: 62 LRLL-RHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISA 119
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
V+ CH + ++HRDLKPEN L E+ +K DFGLS G GSP Y APE
Sbjct: 120 VEYCHRHKIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPE 176
Query: 255 VL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VS 311
V+ + GPE+DVWS GVI+Y++LC PF E+ + I G PK +S
Sbjct: 177 VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTL-----PKFLS 231
Query: 312 KEAKELVKNMLDPNPYNRLTLEEVLENPWIKND 344
A L+K ML NP NR+++ E++++ W K D
Sbjct: 232 PGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVD 264
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 146/270 (54%), Gaps = 7/270 (2%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
++LD Y +ELG G FG+ H+ E TG +A K + E D + VR+E++ M
Sbjct: 48 HVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQTMSV 104
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH-YTERAAAAVGKTILRIVK 196
L +HP +V +A+ED + + ++ E GGELF+++ ++ + +E A + + + +
Sbjct: 105 L-RHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLC 163
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
HEN +H DLKPEN +F N +LK IDFGL+ P + G+ + APEV
Sbjct: 164 HMHENNYVHLDLKPENIMFTTKRSN-ELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVA 222
Query: 257 R-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK 315
+ G D+WS GV+ YILL G+ PF E ++ + + + + +S++ K
Sbjct: 223 EGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGK 282
Query: 316 ELVKNMLDPNPYNRLTLEEVLENPWIKNDN 345
+ ++ +L +P R+T+ + LE+PW+ N
Sbjct: 283 DFIRKLLLADPNTRMTIHQALEHPWLTPGN 312
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 149/267 (55%), Gaps = 8/267 (2%)
Query: 79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHL 138
+ +KY ++LGRGEFGI H+C E + +TY K + K+K D V++E+ I+ ++
Sbjct: 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFV---KVKG-TDQVLVKKEISIL-NI 57
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKV 197
+H NI+ E++E + + ++ E G ++F+RI + ER + + ++
Sbjct: 58 ARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQF 117
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR 257
H + + H D++PEN ++ +S +K I+FG + KPG+ F + +P Y APEV +
Sbjct: 118 LHSHNIGHFDIRPENIIY-QTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQ 176
Query: 258 RNY-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
+ D+WS G ++Y+LL G+ PF AET + I I+ + F+ + + ++S EA +
Sbjct: 177 HDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMD 236
Query: 317 LVKNMLDPNPYNRLTLEEVLENPWIKN 343
V +L +R+T E L++PW+K
Sbjct: 237 FVDRLLVKERKSRMTASEALQHPWLKQ 263
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 139/293 (47%), Gaps = 42/293 (14%)
Query: 79 ILDKYTFGKE-LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
I+D Y + LG G G Q F T E +A K + D RREVE+
Sbjct: 15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWR 66
Query: 138 LPKHPNIV----TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKTI 191
+ P+IV Y+ Y + + +VME +GGELF RI ++G +TER A+ + K+I
Sbjct: 67 ASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 126
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
++ H + HRD+KPEN L+ N+ LK DFG
Sbjct: 127 GEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF-------------------- 166
Query: 252 APEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAE----TEEGIAHAIIRGKIDFERDPW 307
A E Y D+WS GVI+YILLCG PPF++ G+ I G+ +F W
Sbjct: 167 AKETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 226
Query: 308 PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRI 360
+VS+E K L++N+L P R+T+ E + +PWI P L TSR+
Sbjct: 227 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH---TSRV 276
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 146/270 (54%), Gaps = 7/270 (2%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
++LD Y +ELG G FG+ H+ E TG +A K + E D + VR+E++ M
Sbjct: 154 HVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQTMSV 210
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH-YTERAAAAVGKTILRIVK 196
L +HP +V +A+ED + + ++ E GGELF+++ ++ + +E A + + + +
Sbjct: 211 L-RHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLC 269
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
HEN +H DLKPEN +F N +LK IDFGL+ P + G+ + APEV
Sbjct: 270 HMHENNYVHLDLKPENIMFTTKRSN-ELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVA 328
Query: 257 R-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK 315
+ G D+WS GV+ YILL G+ PF E ++ + + + + +S++ K
Sbjct: 329 EGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGK 388
Query: 316 ELVKNMLDPNPYNRLTLEEVLENPWIKNDN 345
+ ++ +L +P R+T+ + LE+PW+ N
Sbjct: 389 DFIRKLLLADPNTRMTIHQALEHPWLTPGN 418
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/265 (36%), Positives = 139/265 (52%), Gaps = 13/265 (4%)
Query: 83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
Y K LG G FG + TG+ A K I K+ L + RE+ +R L +HP
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-RHP 64
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
+I+ + + KD I +V+E G ELFD IV + +E+ A + I+ V+ CH +
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 123
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL--RRNY 260
++HRDLKPEN L E+ +K DFGLS G GSP Y APEV+ +
Sbjct: 124 IVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 180
Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKELVK 319
GPE+DVWS GVI+Y++LC PF E+ + I G PK +S A L+K
Sbjct: 181 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTL-----PKFLSPGAAGLIK 235
Query: 320 NMLDPNPYNRLTLEEVLENPWIKND 344
ML NP NR+++ E++++ W K D
Sbjct: 236 RMLIVNPLNRISIHEIMQDDWFKVD 260
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 138/264 (52%), Gaps = 10/264 (3%)
Query: 83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
Y G LG G FG TG A K + ++K+++ + +RRE++ ++ L +HP
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLK-LFRHP 76
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
+I+ + I++VME GGELFD I G E+ + + + IL V CH +
Sbjct: 77 HIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHM 136
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL--RRNY 260
V+HRDLKPEN L D N+ K DFGLS GE GSP Y APEV+ R
Sbjct: 137 VVHRDLKPENVLL-DAHMNA--KIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYA 193
Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
GPE+D+WS+GVI+Y LLCG PF + + I G + P V L+K+
Sbjct: 194 GPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVI----SLLKH 249
Query: 321 MLDPNPYNRLTLEEVLENPWIKND 344
ML +P R T++++ E+ W K D
Sbjct: 250 MLQVDPMKRATIKDIREHEWFKQD 273
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/267 (35%), Positives = 140/267 (52%), Gaps = 10/267 (3%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
+ Y G LG G FG TG A K + ++K+++ + ++RE++ ++ L
Sbjct: 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK-LF 68
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HP+I+ + ++VME GGELFD I G E A + + IL V CH
Sbjct: 69 RHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCH 128
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL--R 257
+ V+HRDLKPEN L D N+ K DFGLS GE + GSP Y APEV+ R
Sbjct: 129 RHMVVHRDLKPENVLL-DAHMNA--KIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGR 185
Query: 258 RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL 317
GPE+D+WS GVI+Y LLCG PF E + IRG + + + +++ L
Sbjct: 186 LYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKK-IRGGVFYIPE---YLNRSVATL 241
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKND 344
+ +ML +P R T++++ E+ W K D
Sbjct: 242 LMHMLQVDPLKRATIKDIREHEWFKQD 268
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/274 (34%), Positives = 147/274 (53%), Gaps = 14/274 (5%)
Query: 79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHL 138
+L Y + +G G F I TGE A K + K L + D+ ++ E+E +++L
Sbjct: 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGS--DLPRIKTEIEALKNL 65
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
+H +I E + I++V+E C GGELFD I+++ +E V + I+ V
Sbjct: 66 -RHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYV 124
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC--EIVGSPYYMAPEVL 256
H G HRDLKPEN LF E +LK IDFGL K + + GS Y APE++
Sbjct: 125 HSQGYAHRDLKPENLLF---DEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELI 181
Query: 257 R-RNY-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
+ ++Y G E DVWS G+++Y+L+CG PF + + I+RGK D + W +S +
Sbjct: 182 QGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPK--W--LSPSS 237
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAP 348
L++ ML +P R++++ +L +PWI D + P
Sbjct: 238 ILLLQQMLQVDPKKRISMKNLLNHPWIMQDYNYP 271
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 94/267 (35%), Positives = 140/267 (52%), Gaps = 10/267 (3%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
+ Y G LG G FG TG A K + ++K+++ + ++RE++ ++ L
Sbjct: 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK-LF 68
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HP+I+ + ++VME GGELFD I G E A + + IL V CH
Sbjct: 69 RHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCH 128
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL--R 257
+ V+HRDLKPEN L D N+++ DFGLS GE GSP Y APEV+ R
Sbjct: 129 RHMVVHRDLKPENVLL-DAHMNAKIA--DFGLSNMMSDGEFLRTSCGSPNYAAPEVISGR 185
Query: 258 RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL 317
GPE+D+WS GVI+Y LLCG PF E + IRG + + + +++ L
Sbjct: 186 LYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKK-IRGGVFYIPE---YLNRSVATL 241
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKND 344
+ +ML +P R T++++ E+ W K D
Sbjct: 242 LMHMLQVDPLKRATIKDIREHEWFKQD 268
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 103/275 (37%), Positives = 149/275 (54%), Gaps = 11/275 (4%)
Query: 69 SVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDV 128
S+ S E + Y K +G+G F + TG A K I K +L + +
Sbjct: 3 SITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQL-NPTSLQKL 61
Query: 129 RREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVG 188
REV IM+ L HPNIV E E + +YLVME GGE+FD +V G E+ A A
Sbjct: 62 FREVRIMKIL-NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF 120
Query: 189 KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP 248
+ I+ V+ CH+ ++HRDLK EN L DG N +K DFG S F G + GSP
Sbjct: 121 RQIVSAVQYCHQKYIVHRDLKAENLLL-DGDMN--IKIADFGFSNEFTVGNKLDTFCGSP 177
Query: 249 YYMAPEVLR-RNY-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDP 306
Y APE+ + + Y GPE+DVWS GVI+Y L+ G PF + + + ++RGK R P
Sbjct: 178 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIP 234
Query: 307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
+ +S + + L+K +L NP R +LE+++++ W+
Sbjct: 235 F-YMSTDCENLLKKLLVLNPIKRGSLEQIMKDRWM 268
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/260 (37%), Positives = 139/260 (53%), Gaps = 11/260 (4%)
Query: 83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
Y K +G+G F I TG+ A K I K +L + + + REV I + L HP
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSS-SLQKLFREVRIXKVL-NHP 73
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
NIV E E + +YLV E GGE+FD +V G E+ A A + I+ V+ CH+
Sbjct: 74 NIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKF 133
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-RNY- 260
++HRDLK EN L D N +K DFG S F G + G+P Y APE+ + + Y
Sbjct: 134 IVHRDLKAENLLL-DADXN--IKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYD 190
Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
GPE+DVWS GVI+Y L+ G PF + + + ++RGK R P+ S + + L+K
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YXSTDCENLLKK 246
Query: 321 MLDPNPYNRLTLEEVLENPW 340
L NP R TLE++ ++ W
Sbjct: 247 FLILNPSKRGTLEQIXKDRW 266
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 147/278 (52%), Gaps = 10/278 (3%)
Query: 69 SVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDV 128
++ P +D + G+ LG+G+FG + E + A K + K +L+ E +
Sbjct: 3 ALAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQL 62
Query: 129 RREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVG 188
RRE+EI HL +HPNI+ + D+ IYL++E GEL+ + G + E+ +A
Sbjct: 63 RREIEIQSHL-RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM 121
Query: 189 KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP 248
+ + + CHE V+HRD+KPEN L E LK DFG S+ P + + G+
Sbjct: 122 EELADALHYCHERKVIHRDIKPENLLMGYKGE---LKIADFGWSV-HAPSLRRRXMCGTL 177
Query: 249 YYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW 307
Y+ PE++ + + ++D+W AGV+ Y L G+PPF + + I+ + F
Sbjct: 178 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP---- 233
Query: 308 PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN 345
P +S +K+L+ +L +P RL L+ V+E+PW+K ++
Sbjct: 234 PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANS 271
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 147/278 (52%), Gaps = 10/278 (3%)
Query: 69 SVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDV 128
++ P +D + G+ LG+G+FG + E + A K + K +L+ E +
Sbjct: 2 ALAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQL 61
Query: 129 RREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVG 188
RRE+EI HL +HPNI+ + D+ IYL++E GEL+ + G + E+ +A
Sbjct: 62 RREIEIQSHL-RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM 120
Query: 189 KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP 248
+ + + CHE V+HRD+KPEN L E LK DFG S+ P + + G+
Sbjct: 121 EELADALHYCHERKVIHRDIKPENLLMGYKGE---LKIADFGWSV-HAPSLRRRXMCGTL 176
Query: 249 YYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW 307
Y+ PE++ + + ++D+W AGV+ Y L G+PPF + + I+ + F
Sbjct: 177 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP---- 232
Query: 308 PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN 345
P +S +K+L+ +L +P RL L+ V+E+PW+K ++
Sbjct: 233 PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANS 270
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/272 (33%), Positives = 143/272 (52%), Gaps = 12/272 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
L+ + G+ LG+G+FG + E ++ A K + K +L+ +RREVEI HL
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHL- 69
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HPNI+ + D +YL++E G ++ + + E+ A + + CH
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCH 129
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
V+HRD+KPEN L N +LK DFG S+ P + + G+ Y+ PE++ R
Sbjct: 130 SKRVIHRDIKPENLLLGS---NGELKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGR 185
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
+ ++D+WS GV+ Y L G+PPF A T + I R + F P V++ A++L
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTF-----PDFVTEGARDL 240
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
+ +L N RLTL EVLE+PWIK ++ P+
Sbjct: 241 ISRLLKHNASQRLTLAEVLEHPWIKANSSKPS 272
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 90/272 (33%), Positives = 143/272 (52%), Gaps = 12/272 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
L+ + G+ LG+G+FG + E ++ A K + K +L+ +RREVEI HL
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHL- 69
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HPNI+ + D +YL++E G ++ + + E+ A + + CH
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCH 129
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
V+HRD+KPEN L N +LK DFG S+ P + + G+ Y+ PE++ R
Sbjct: 130 SKRVIHRDIKPENLLLGS---NGELKIADFGWSV-HAPSSRRDTLCGTLDYLPPEMIEGR 185
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
+ ++D+WS GV+ Y L G+PPF A T + I R + F P V++ A++L
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTF-----PDFVTEGARDL 240
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
+ +L N RLTL EVLE+PWIK ++ P+
Sbjct: 241 ISRLLKHNASQRLTLAEVLEHPWIKANSSKPS 272
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 152/310 (49%), Gaps = 52/310 (16%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK--TEIDIDDVRREVEIMRHLP 139
KY +G+G +G+ E +T A K + K K++ D++ ++ EV +M+ L
Sbjct: 27 KYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL- 85
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKT-------- 190
HPNI E YED+ I LVMELC GG L D++ V T + A V KT
Sbjct: 86 HHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPEC 145
Query: 191 -------------------------------ILRIVKVCHENGVMHRDLKPENFLFADGS 219
I + H G+ HRD+KPENFLF+ +
Sbjct: 146 NEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFST-N 204
Query: 220 ENSQLKAIDFGLSI-FFK--PGEQF--CEIVGSPYYMAPEVLR---RNYGPEIDVWSAGV 271
++ ++K +DFGLS F+K GE + G+PY++APEVL +YGP+ D WSAGV
Sbjct: 205 KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGV 264
Query: 272 IIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLT 331
++++LL G PF + ++ K+ FE + +S A++L+ N+L+ N R
Sbjct: 265 LLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFD 324
Query: 332 LEEVLENPWI 341
L++PWI
Sbjct: 325 AMRALQHPWI 334
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 140/272 (51%), Gaps = 12/272 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
L+ + G+ LG+G+FG + E ++ A K + K +L+ +RREVEI HL
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 70
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HPNI+ + D +YL++E GE++ + + E+ A + + CH
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
V+HRD+KPEN L E LK DFG S+ P + + G+ Y+ PE++ R
Sbjct: 131 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGR 186
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
+ ++D+WS GV+ Y L G PPF A T + I R + F P V++ A++L
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 241
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
+ +L NP R L EVLE+PWI ++ P+
Sbjct: 242 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 273
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 140/272 (51%), Gaps = 12/272 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
L+ + G+ LG+G+FG + E ++ A K + K +L+ +RREVEI HL
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 70
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HPNI+ + D +YL++E GE++ + + E+ A + + CH
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
V+HRD+KPEN L E LK DFG S+ P + + G+ Y+ PE++ R
Sbjct: 131 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRXXLXGTLDYLPPEMIEGR 186
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
+ ++D+WS GV+ Y L G PPF A T + I R + F P V++ A++L
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 241
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
+ +L NP R L EVLE+PWI ++ P+
Sbjct: 242 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 273
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 146/278 (52%), Gaps = 10/278 (3%)
Query: 69 SVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDV 128
++ P +D + + LG+G+FG + E + A K + K +L+ E +
Sbjct: 2 ALAEMPKRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQL 61
Query: 129 RREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVG 188
RRE+EI HL +HPNI+ + D+ IYL++E GEL+ + G + E+ +A
Sbjct: 62 RREIEIQSHL-RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM 120
Query: 189 KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP 248
+ + + CHE V+HRD+KPEN L E LK DFG S+ P + + G+
Sbjct: 121 EELADALHYCHERKVIHRDIKPENLLMGYKGE---LKIADFGWSV-HAPSLRRRXMCGTL 176
Query: 249 YYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW 307
Y+ PE++ + + ++D+W AGV+ Y L G+PPF + + I+ + F
Sbjct: 177 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP---- 232
Query: 308 PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN 345
P +S +K+L+ +L +P RL L+ V+E+PW+K ++
Sbjct: 233 PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANS 270
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 140/272 (51%), Gaps = 12/272 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
L+ + G+ LG+G+FG + E ++ A K + K +L+ +RREVEI HL
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 65
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HPNI+ + D +YL++E G ++ + + E+ A + + CH
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
V+HRD+KPEN L E LK DFG S+ P + E+ G+ Y+ PE++ R
Sbjct: 126 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTELCGTLDYLPPEMIEGR 181
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
+ ++D+WS GV+ Y L G PPF A T + I R + F P V++ A++L
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 236
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
+ +L NP R L EVLE+PWI ++ P+
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 148/272 (54%), Gaps = 11/272 (4%)
Query: 77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMR 136
G ++ + G LG+G F ++ I TG A K I K+ + + V+ EV+I
Sbjct: 7 GEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHC 66
Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH-YTERAAAAVGKTILRIV 195
L KHP+I+ +ED + +YLV+E+C GE+ + N+ ++E A I+ +
Sbjct: 67 QL-KHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGM 125
Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEIVGSPYYMAPE 254
H +G++HRDL N L + N +K DFGL+ K P E+ + G+P Y++PE
Sbjct: 126 LYLHSHGILHRDLTLSNLLL---TRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPE 182
Query: 255 VLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
+ R+ +G E DVWS G + Y LL G PPF +T + + ++ D+E + +S E
Sbjct: 183 IATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA--DYEMPSF--LSIE 238
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPWIKNDN 345
AK+L+ +L NP +RL+L VL++P++ ++
Sbjct: 239 AKDLIHQLLRRNPADRLSLSSVLDHPFMSRNS 270
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 140/272 (51%), Gaps = 12/272 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
L+ + G+ LG+G+FG + E ++ A K + K +L+ +RREVEI HL
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 70
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HPNI+ + D +YL++E G ++ + + E+ A + + CH
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
V+HRD+KPEN L E LK DFG S+ P + ++ G+ Y+ PE++ R
Sbjct: 131 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTDLCGTLDYLPPEMIEGR 186
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
+ ++D+WS GV+ Y L G PPF A T + I R + F P V++ A++L
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 241
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
+ +L NP R L EVLE+PWI ++ P+
Sbjct: 242 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 273
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 140/272 (51%), Gaps = 12/272 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
L+ + G+ LG+G+FG + E ++ A K + K +L+ +RREVEI HL
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 66
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HPNI+ + D +YL++E G ++ + + E+ A + + CH
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
V+HRD+KPEN L E LK DFG S+ P + ++ G+ Y+ PE++ R
Sbjct: 127 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTDLCGTLDYLPPEMIEGR 182
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
+ ++D+WS GV+ Y L G PPF A T + I R + F P V++ A++L
Sbjct: 183 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 237
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
+ +L NP R L EVLE+PWI ++ P+
Sbjct: 238 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 269
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 140/272 (51%), Gaps = 12/272 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
L+ + G+ LG+G+FG + E ++ A K + K +L+ +RREVEI HL
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 65
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HPNI+ + D +YL++E G ++ + + E+ A + + CH
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
V+HRD+KPEN L E LK DFG S+ P + ++ G+ Y+ PE++ R
Sbjct: 126 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTDLCGTLDYLPPEMIEGR 181
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
+ ++D+WS GV+ Y L G PPF A T + I R + F P V++ A++L
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 236
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
+ +L NP R L EVLE+PWI ++ P+
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 139/272 (51%), Gaps = 12/272 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
L+ + G+ LG+G+FG + E ++ A K + K +L+ +RREVEI HL
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 68
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HPNI+ + D +YL++E G ++ + + E+ A + + CH
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
V+HRD+KPEN L E LK DFG S+ P + + G+ Y+ PE++ R
Sbjct: 129 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGR 184
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
+ ++D+WS GV+ Y L G PPF A T + I R + F P V++ A++L
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 239
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
+ +L NP R L EVLE+PWI ++ P+
Sbjct: 240 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 271
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 139/272 (51%), Gaps = 12/272 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
L+ + G+ LG+G+FG + E ++ A K + K +L+ +RREVEI HL
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 70
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HPNI+ + D +YL++E G ++ + + E+ A + + CH
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
V+HRD+KPEN L E LK DFG S+ P + + G+ Y+ PE++ R
Sbjct: 131 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGR 186
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
+ ++D+WS GV+ Y L G PPF A T + I R + F P V++ A++L
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 241
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
+ +L NP R L EVLE+PWI ++ P+
Sbjct: 242 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 273
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 140/272 (51%), Gaps = 12/272 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
L+ + G+ LG+G+FG + E ++ A K + K +L+ +RREVEI HL
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 65
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HPNI+ + D +YL++E G ++ + + E+ A + + CH
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
V+HRD+KPEN L E LK DFG S+ P + ++ G+ Y+ PE++ R
Sbjct: 126 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTDLCGTLDYLPPEMIEGR 181
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
+ ++D+WS GV+ Y L G PPF A T + I R + F P V++ A++L
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 236
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
+ +L NP R L EVLE+PWI ++ P+
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 139/272 (51%), Gaps = 12/272 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
L+ + G+ LG+G+FG + E ++ A K + K +L+ +RREVEI HL
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 68
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HPNI+ + D +YL++E G ++ + + E+ A + + CH
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
V+HRD+KPEN L E LK DFG S+ P + + G+ Y+ PE++ R
Sbjct: 129 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRAALCGTLDYLPPEMIEGR 184
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
+ ++D+WS GV+ Y L G PPF A T + I R + F P V++ A++L
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 239
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
+ +L NP R L EVLE+PWI ++ P+
Sbjct: 240 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 271
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 139/272 (51%), Gaps = 12/272 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
L+ + G+ LG+G+FG + E ++ A K + K +L+ +RREVEI HL
Sbjct: 24 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 82
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HPNI+ + D +YL++E G ++ + + E+ A + + CH
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 142
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
V+HRD+KPEN L E LK DFG S+ P + + G+ Y+ PE++ R
Sbjct: 143 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGR 198
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
+ ++D+WS GV+ Y L G PPF A T + I R + F P V++ A++L
Sbjct: 199 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 253
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
+ +L NP R L EVLE+PWI ++ P+
Sbjct: 254 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 285
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 139/272 (51%), Gaps = 12/272 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
L+ + G+ LG+G+FG + E ++ A K + K +L+ +RREVEI HL
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 65
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HPNI+ + D +YL++E G ++ + + E+ A + + CH
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
V+HRD+KPEN L E LK DFG S+ P + + G+ Y+ PE++ R
Sbjct: 126 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGR 181
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
+ ++D+WS GV+ Y L G PPF A T + I R + F P V++ A++L
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 236
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
+ +L NP R L EVLE+PWI ++ P+
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 139/272 (51%), Gaps = 12/272 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
L+ + G+ LG+G+FG + E ++ A K + K +L+ +RREVEI HL
Sbjct: 33 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 91
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HPNI+ + D +YL++E G ++ + + E+ A + + CH
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
V+HRD+KPEN L E LK DFG S+ P + + G+ Y+ PE++ R
Sbjct: 152 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGR 207
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
+ ++D+WS GV+ Y L G PPF A T + I R + F P V++ A++L
Sbjct: 208 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 262
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
+ +L NP R L EVLE+PWI ++ P+
Sbjct: 263 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 294
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/287 (34%), Positives = 147/287 (51%), Gaps = 20/287 (6%)
Query: 68 RSVVSNPAEGNIL---DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAK-EKLKTEI 123
R VS P + I+ D+Y K++G G FG+ + ++ E A K I + EK+
Sbjct: 3 RPAVSGPMDLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAA-- 60
Query: 124 DIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERA 183
+V+RE+ R L +HPNIV +KE + +VME GGELF+RI N G ++E
Sbjct: 61 ---NVKREIINHRSL-RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDE 116
Query: 184 AAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE 243
A + ++ V CH V HRDLK EN L DGS +LK DFG S Q
Sbjct: 117 ARFFFQQLISGVSYCHAMQVCHRDLKLENTLL-DGSPAPRLKICDFGYSKSSVLHSQPKS 175
Query: 244 IVGSPYYMAPEV-LRRNY-GPEIDVWSAGVIIYILLCGVPPFWAETE----EGIAHAIIR 297
VG+P Y+APEV L++ Y G DVWS GV +Y++L G PF E H I+
Sbjct: 176 TVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL- 234
Query: 298 GKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPW-IKN 343
+ + + +S E + L+ + +P R+++ E+ + W +KN
Sbjct: 235 -NVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKN 280
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 138/272 (50%), Gaps = 12/272 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
L+ + G+ LG+G+FG + E ++ A K + K +L+ +RREVEI HL
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 70
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HPNI+ + D +YL++E G ++ + + E+ A + + CH
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
V+HRD+KPEN L E LK DFG S+ P + + G+ Y+ PE + R
Sbjct: 131 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEXIEGR 186
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
+ ++D+WS GV+ Y L G PPF A T + I R + F P V++ A++L
Sbjct: 187 XHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 241
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
+ +L NP R L EVLE+PWI ++ P+
Sbjct: 242 ISRLLKHNPSQRPXLREVLEHPWITANSSKPS 273
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 139/272 (51%), Gaps = 12/272 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
L+ + G+ LG+G+FG + E ++ A K + K +L+ +RREVEI HL
Sbjct: 9 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 67
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HPNI+ + D +YL++E G ++ + + E+ A + + CH
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
V+HRD+KPEN L E LK DFG S+ P + + G+ Y+ PE++ R
Sbjct: 128 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRXXLCGTLDYLPPEMIEGR 183
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
+ ++D+WS GV+ Y L G PPF A T + I R + F P V++ A++L
Sbjct: 184 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 238
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
+ +L NP R L EVLE+PWI ++ P+
Sbjct: 239 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 270
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 140/272 (51%), Gaps = 12/272 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
L+ + G+ LG+G+FG + E ++ A K + K +L+ +RREVEI HL
Sbjct: 33 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 91
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HPNI+ + D +YL++E G ++ + + E+ A + + CH
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
V+HRD+KPEN L E LK DFG S+ P + ++ G+ Y+ PE++ R
Sbjct: 152 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRDDLCGTLDYLPPEMIEGR 207
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
+ ++D+WS GV+ Y L G PPF A T + I R + F P V++ A++L
Sbjct: 208 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 262
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
+ +L NP R L EVLE+PWI ++ P+
Sbjct: 263 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 294
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 139/272 (51%), Gaps = 12/272 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
L+ + G+ LG+G+FG + E ++ A K + K +L+ +RREVEI HL
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 65
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HPNI+ + D +YL++E G ++ + + E+ A + + CH
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
V+HRD+KPEN L E LK DFG S+ P + + G+ Y+ PE++ R
Sbjct: 126 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRAALCGTLDYLPPEMIEGR 181
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
+ ++D+WS GV+ Y L G PPF A T + I R + F P V++ A++L
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 236
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
+ +L NP R L EVLE+PWI ++ P+
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 139/272 (51%), Gaps = 12/272 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
L+ + G+ LG+G+FG + E ++ A K + K +L+ +RREVEI HL
Sbjct: 6 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 64
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HPNI+ + D +YL++E G ++ + + E+ A + + CH
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 124
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
V+HRD+KPEN L E LK DFG S+ P + + G+ Y+ PE++ R
Sbjct: 125 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGR 180
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
+ ++D+WS GV+ Y L G PPF A T + I R + F P V++ A++L
Sbjct: 181 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 235
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
+ +L NP R L EVLE+PWI ++ P+
Sbjct: 236 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 267
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 139/272 (51%), Gaps = 12/272 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
L+ + G+ LG+G+FG + E ++ A K + K +L+ +RREVEI HL
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 65
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HPNI+ + D +YL++E G ++ + + E+ A + + CH
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
V+HRD+KPEN L E LK DFG S+ P + + G+ Y+ PE++ R
Sbjct: 126 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTXLCGTLDYLPPEMIEGR 181
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
+ ++D+WS GV+ Y L G PPF A T + I R + F P V++ A++L
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 236
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
+ +L NP R L EVLE+PWI ++ P+
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 139/272 (51%), Gaps = 12/272 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
L+ + G+ LG+G+FG + E ++ A K + K +L+ +RREVEI HL
Sbjct: 11 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 69
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HPNI+ + D +YL++E G ++ + + E+ A + + CH
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 129
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
V+HRD+KPEN L E LK DFG S+ P + + G+ Y+ PE++ R
Sbjct: 130 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGR 185
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
+ ++D+WS GV+ Y L G PPF A T + I R + F P V++ A++L
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 240
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
+ +L NP R L EVLE+PWI ++ P+
Sbjct: 241 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 272
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 138/272 (50%), Gaps = 12/272 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
L+ + G+ LG+G+FG + E + A K + K +L+ +RREVEI HL
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 65
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HPNI+ + D +YL++E G ++ + + E+ A + + CH
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
V+HRD+KPEN L E LK DFG S+ P + + G+ Y+ PE++ R
Sbjct: 126 SKKVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRAALCGTLDYLPPEMIEGR 181
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
+ ++D+WS GV+ Y L G PPF A T + I R + F P V++ A++L
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTF-----PDFVTEGARDL 236
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
+ +L NP R L EVLE+PWI ++ P+
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 139/274 (50%), Gaps = 12/274 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
L+ + G+ LG+G+FG + E ++ A K + K +L+ +RREVEI HL
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 66
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HPNI+ + D +YL++E G ++ + + E+ A + + CH
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
V+HRD+KPEN L E LK DFG S P + + G+ Y+ PE++ R
Sbjct: 127 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSC-HAPSSRRTTLSGTLDYLPPEMIEGR 182
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
+ ++D+WS GV+ Y L G PPF A T + I R + F P V++ A++L
Sbjct: 183 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 237
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVS 351
+ +L NP R L EVLE+PWI ++ P+ S
Sbjct: 238 ISRLLKHNPSQRPMLREVLEHPWITANSSKPSNS 271
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 134/262 (51%), Gaps = 8/262 (3%)
Query: 86 GKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIV 145
KELGRG+F + QC TG+ YA K + K + + + + E+ ++ P ++
Sbjct: 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAE-ILHEIAVLELAKSCPRVI 92
Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGV 203
E YE+ I L++E GGE+F + + +E + K IL V H+N +
Sbjct: 93 NLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNI 152
Query: 204 MHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRNYGP- 262
+H DLKP+N L + +K +DFG+S + EI+G+P Y+APE+L NY P
Sbjct: 153 VHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEIL--NYDPI 210
Query: 263 --EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
D+W+ G+I Y+LL PF E + I + +D+ + + VS+ A + +++
Sbjct: 211 TTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQS 270
Query: 321 MLDPNPYNRLTLEEVLENPWIK 342
+L NP R T E L + W++
Sbjct: 271 LLVKNPEKRPTAEICLSHSWLQ 292
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 139/272 (51%), Gaps = 12/272 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
L+ + G+ LG+G+FG + E ++ A K + K +L+ +RREVEI HL
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 65
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HPNI+ + D +YL++E G ++ + + E+ A + + CH
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
V+HRD+KPEN L E LK DFG S+ P + + G+ Y+ PE++ R
Sbjct: 126 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRXXLCGTLDYLPPEMIEGR 181
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
+ ++D+WS GV+ Y L G PPF A T + I R + F P V++ A++L
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 236
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
+ +L NP R L EVLE+PWI ++ P+
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 139/272 (51%), Gaps = 12/272 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
L+ + G+ LG+G+FG + E ++ A K + K +L+ +RREVEI HL
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 66
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HPNI+ + D +YL++E G ++ + + E+ A + + CH
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
V+HRD+KPEN L E LK DFG S+ P + + G+ Y+ PE++ R
Sbjct: 127 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRDTLCGTLDYLPPEMIEGR 182
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
+ ++D+WS GV+ Y L G PPF A T + I R + F P V++ A++L
Sbjct: 183 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 237
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
+ +L NP R L EVLE+PWI ++ P+
Sbjct: 238 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 269
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 139/272 (51%), Gaps = 12/272 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
L+ + G+ LG+G+FG + E ++ A K + K +L+ +RREVEI HL
Sbjct: 9 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 67
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HPNI+ + D +YL++E G ++ + + E+ A + + CH
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
V+HRD+KPEN L E LK +FG S+ P + + G+ Y+ PE++ R
Sbjct: 128 SKRVIHRDIKPENLLLGSAGE---LKIANFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGR 183
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
+ ++D+WS GV+ Y L G PPF A T + I R + F P V++ A++L
Sbjct: 184 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 238
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
+ +L NP R L EVLE+PWI ++ P+
Sbjct: 239 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 270
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 140/272 (51%), Gaps = 12/272 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
L+ + G+ LG+G+FG + E ++ A K + K +L+ +RREVEI HL
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 68
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HPNI+ + D +YL++E G ++ + + E+ A + + CH
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
V+HRD+KPEN L E LK DFG S+ P + ++ G+ Y+ PE++ R
Sbjct: 129 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRDDLCGTLDYLPPEMIEGR 184
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
+ ++D+WS GV+ Y L G PPF A T + I R + F P V++ A++L
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 239
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
+ +L NP R L EVLE+PWI ++ P+
Sbjct: 240 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 271
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 139/272 (51%), Gaps = 12/272 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
L+ + G+ LG+G+FG + E ++ A K + K +L+ +RREVEI HL
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 68
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HPNI+ + D +YL++E G ++ + + E+ A + + CH
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
V+HRD+KPEN L E LK +FG S+ P + + G+ Y+ PE++ R
Sbjct: 129 SKRVIHRDIKPENLLLGSAGE---LKIANFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGR 184
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
+ ++D+WS GV+ Y L G PPF A T + I R + F P V++ A++L
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 239
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
+ +L NP R L EVLE+PWI ++ P+
Sbjct: 240 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 271
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 146/282 (51%), Gaps = 17/282 (6%)
Query: 68 RSVVSNPAEGNIL---DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID 124
R VS P + I+ D+Y K++G G FG+ + ++ E A K I + + +ID
Sbjct: 3 RPAVSGPMDLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE---KID 59
Query: 125 IDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAA 184
++V+RE+ R L +HPNIV +KE + +VME GGELF+RI N G ++E A
Sbjct: 60 -ENVKREIINHRSL-RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEA 117
Query: 185 AAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI 244
+ ++ V CH V HRDLK EN L DGS +LK FG S Q +
Sbjct: 118 RFFFQQLISGVSYCHAMQVCHRDLKLENTLL-DGSPAPRLKICAFGYSKSSVLHSQPKDT 176
Query: 245 VGSPYYMAPEV-LRRNY-GPEIDVWSAGVIIYILLCGVPPFWAETE----EGIAHAIIRG 298
VG+P Y+APEV L++ Y G DVWS GV +Y++L G PF E H I+
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL-- 234
Query: 299 KIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPW 340
+ + + +S E + L+ + +P R+++ E+ + W
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEW 276
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 137/268 (51%), Gaps = 12/268 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
L+ + G+ LG+G+FG + E ++ A K + K +L+ +RREVEI HL
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 68
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HPNI+ + D +YL++E G ++ + + E+ A + + CH
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
V+HRD+KPEN L E LK DFG S+ P + + G+ Y+ PE++ R
Sbjct: 129 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGR 184
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
+ ++D+WS GV+ Y L G PPF A T + I R + F P V++ A++L
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 239
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDN 345
+ +L NP R L EVLE+PWI ++
Sbjct: 240 ISRLLKHNPSQRPMLREVLEHPWITANS 267
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 145/282 (51%), Gaps = 17/282 (6%)
Query: 68 RSVVSNPAEGNIL---DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID 124
R VS P + I+ D+Y K++G G FG+ + ++ E A K I + + +ID
Sbjct: 3 RPAVSGPMDLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE---KID 59
Query: 125 IDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAA 184
++V+RE+ R L +HPNIV +KE + +VME GGELF+RI N G ++E A
Sbjct: 60 -ENVKREIINHRSL-RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEA 117
Query: 185 AAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI 244
+ ++ V CH V HRDLK EN L DGS +LK FG S Q
Sbjct: 118 RFFFQQLISGVSYCHAMQVCHRDLKLENTLL-DGSPAPRLKICAFGYSKSSVLHSQPKST 176
Query: 245 VGSPYYMAPEV-LRRNY-GPEIDVWSAGVIIYILLCGVPPFWAETE----EGIAHAIIRG 298
VG+P Y+APEV L++ Y G DVWS GV +Y++L G PF E H I+
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL-- 234
Query: 299 KIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPW 340
+ + + +S E + L+ + +P R+++ E+ + W
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEW 276
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/270 (35%), Positives = 142/270 (52%), Gaps = 15/270 (5%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
D+Y K++G G FG+ + ++ E A K I + + +ID ++V+RE+ R L +
Sbjct: 18 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE---KID-ENVKREIINHRSL-R 72
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
HPNIV +KE + +VME GGELF+RI N G ++E A + ++ V CH
Sbjct: 73 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA 132
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV-LRRN 259
V HRDLK EN L DGS +LK DFG S Q VG+P Y+APEV L++
Sbjct: 133 MQVCHRDLKLENTLL-DGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKE 191
Query: 260 Y-GPEIDVWSAGVIIYILLCGVPPFWAETE----EGIAHAIIRGKIDFERDPWPKVSKEA 314
Y G DVWS GV +Y++L G PF E H I+ + + + +S E
Sbjct: 192 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL--NVQYAIPDYVHISPEC 249
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPW-IKN 343
+ L+ + +P R+++ E+ + W +KN
Sbjct: 250 RHLISRIFVADPAKRISIPEIRNHEWFLKN 279
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 137/268 (51%), Gaps = 12/268 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
L+ + G+ LG+G+FG + E ++ A K + K +L+ +RREVEI HL
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 68
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HPNI+ + D +YL++E G ++ + + E+ A + + CH
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
V+HRD+KPEN L E LK DFG S+ P + + G+ Y+ PE++ R
Sbjct: 129 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRXXLCGTLDYLPPEMIEGR 184
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
+ ++D+WS GV+ Y L G PPF A T + I R + F P V++ A++L
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 239
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDN 345
+ +L NP R L EVLE+PWI ++
Sbjct: 240 ISRLLKHNPSQRPMLREVLEHPWITANS 267
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 136/268 (50%), Gaps = 12/268 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
L+ + G+ LG+G+FG + E + A K + K +L+ +RREVEI HL
Sbjct: 4 LEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 62
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HPNI+ + D +YL++E G ++ + + E+ A + + CH
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 122
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
V+HRD+KPEN L E LK DFG S+ P + + G+ Y+ PE++ R
Sbjct: 123 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGR 178
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
+ ++D+WS GV+ Y L G PPF A T + I R + F P V++ A++L
Sbjct: 179 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 233
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDN 345
+ +L NP R L EVLE+PWI ++
Sbjct: 234 ISRLLKHNPSQRPMLREVLEHPWITANS 261
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/284 (35%), Positives = 145/284 (51%), Gaps = 18/284 (6%)
Query: 70 VVSNPAEGNIL---DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDID 126
V + P + I+ D+Y F K++G G FG+ + T E A K I + ID +
Sbjct: 6 VTTGPLDMPIMHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIER---GAAID-E 61
Query: 127 DVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
+V+RE+ R L +HPNIV +KE + ++ME GGEL++RI N G ++E A
Sbjct: 62 NVQREIINHRSL-RHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARF 120
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVG 246
+ +L V CH + HRDLK EN L DGS +LK DFG S Q VG
Sbjct: 121 FFQQLLSGVSYCHSMQICHRDLKLENTLL-DGSPAPRLKICDFGYSKSSVLHSQPKSTVG 179
Query: 247 SPYYMAPEV-LRRNYGPEI-DVWSAGVIIYILLCGVPPFWAETE----EGIAHAIIRGKI 300
+P Y+APEV LR+ Y +I DVWS GV +Y++L G PF E I+ K
Sbjct: 180 TPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKY 239
Query: 301 DFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPW-IKN 343
D ++S E L+ + +P R+++ E+ + W +KN
Sbjct: 240 SIPDD--IRISPECCHLISRIFVADPATRISIPEIKTHSWFLKN 281
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 145/267 (54%), Gaps = 23/267 (8%)
Query: 89 LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
+G G +G + G+ K++ + TE + + EV ++R L KHPNIV Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLREL-KHPNIVRYY 71
Query: 149 EAYEDKD--AIYLVMELCEGGELFDRIVNKG-----HYTERAAAAVGKTILRIVKVCHE- 200
+ D+ +Y+VME CEGG+L ++ KG + E V + +K CH
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 201 ----NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC-EIVGSPYYMAPEV 255
+ V+HRDLKP N +F DG +N +L DFGL+ E F E VG+PYYM+PE
Sbjct: 131 SDGGHTVLHRDLKPAN-VFLDGKQNVKLG--DFGLARILNHDEDFAKEFVGTPYYMSPEQ 187
Query: 256 LRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
+ R +Y + D+WS G ++Y L +PPF A +++ +A I GK F R P+ + S E
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK--FRRIPY-RYSDEL 244
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWI 341
E++ ML+ Y+R ++EE+LENP I
Sbjct: 245 NEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 98/286 (34%), Positives = 147/286 (51%), Gaps = 18/286 (6%)
Query: 68 RSVVSNPAEGNIL---DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID 124
R V+ P + I+ D+Y K++G G FG+ + + E A K I + + +ID
Sbjct: 3 RPAVAGPMDLPIMHDSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGE---KID 59
Query: 125 IDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAA 184
++V+RE+ R L +HPNIV +KE + +VME GGELF+RI N G ++E A
Sbjct: 60 -ENVKREIINHRSL-RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEA 117
Query: 185 AAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI 244
+ ++ V H V HRDLK EN L DGS +LK DFG S Q
Sbjct: 118 RFFFQQLISGVSYAHAMQVAHRDLKLENTLL-DGSPAPRLKIADFGYSKASVLHSQPKSA 176
Query: 245 VGSPYYMAPEV-LRRNY-GPEIDVWSAGVIIYILLCGVPPFWAETE----EGIAHAIIRG 298
VG+P Y+APEV L++ Y G DVWS GV +Y++L G PF E H I+
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL-- 234
Query: 299 KIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPW-IKN 343
+ + + +S E + L+ + +P R+++ E+ + W +KN
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKN 280
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 134/263 (50%), Gaps = 17/263 (6%)
Query: 83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
Y + LG G FG +T + A K I+++ LK V RE+ ++ L +HP
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLL-RHP 69
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
+I+ + I +V+E GGELFD IV K TE + I+ ++ CH +
Sbjct: 70 HIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHK 128
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL--RRNY 260
++HRDLKPEN L D N +K DFGLS G GSP Y APEV+ +
Sbjct: 129 IVHRDLKPENLLLDD---NLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYA 185
Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGI---AHAIIRGKIDFERDPWPKVSKEAKEL 317
GPE+DVWS G+++Y++L G PF E + ++ + DF +S A+ L
Sbjct: 186 GPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDF-------LSPGAQSL 238
Query: 318 VKNMLDPNPYNRLTLEEVLENPW 340
++ M+ +P R+T++E+ +PW
Sbjct: 239 IRRMIVADPMQRITIQEIRRDPW 261
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 133/297 (44%), Gaps = 33/297 (11%)
Query: 77 GNILDKYTFGKEL-GRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIM 135
G D Y EL G G + ++ G+ YA K I K+ + V REVE +
Sbjct: 8 GKFEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSR---SRVFREVETL 64
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV 195
+ NI+ E +ED YLV E +GG + I + H+ ER A+ V + + +
Sbjct: 65 YQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAAL 124
Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI--------VGS 247
H G+ HRDLKPEN L + S +K DF L K I GS
Sbjct: 125 DFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGS 184
Query: 248 PYYMAPEVLR------RNYGPEIDVWSAGVIIYILLCGVPPF---------WAETE---- 288
YMAPEV+ Y D+WS GV++YI+L G PPF W E
Sbjct: 185 AEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRV 244
Query: 289 --EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
+ +I GK +F W +S EAK+L+ +L + RL+ +VL++PW++
Sbjct: 245 CQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQG 301
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 94/267 (35%), Positives = 144/267 (53%), Gaps = 23/267 (8%)
Query: 89 LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
+G G +G + G+ K++ + TE + + EV ++R L KHPNIV Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLREL-KHPNIVRYY 71
Query: 149 EAYEDKD--AIYLVMELCEGGELFDRIVNKG-----HYTERAAAAVGKTILRIVKVCHE- 200
+ D+ +Y+VME CEGG+L ++ KG + E V + +K CH
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 201 ----NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE-IVGSPYYMAPEV 255
+ V+HRDLKP N +F DG +N +L DFGL+ F + VG+PYYM+PE
Sbjct: 131 SDGGHTVLHRDLKPAN-VFLDGKQNVKLG--DFGLARILNHDTSFAKAFVGTPYYMSPEQ 187
Query: 256 LRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
+ R +Y + D+WS G ++Y L +PPF A +++ +A I GK F R P+ + S E
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK--FRRIPY-RYSDEL 244
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWI 341
E++ ML+ Y+R ++EE+LENP I
Sbjct: 245 NEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 94/267 (35%), Positives = 144/267 (53%), Gaps = 23/267 (8%)
Query: 89 LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
+G G +G + G+ K++ + TE + + EV ++R L KHPNIV Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLREL-KHPNIVRYY 71
Query: 149 EAYEDKD--AIYLVMELCEGGELFDRIVNKG-----HYTERAAAAVGKTILRIVKVCHE- 200
+ D+ +Y+VME CEGG+L ++ KG + E V + +K CH
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 201 ----NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE-IVGSPYYMAPEV 255
+ V+HRDLKP N +F DG +N +L DFGL+ F + VG+PYYM+PE
Sbjct: 131 SDGGHTVLHRDLKPAN-VFLDGKQNVKLG--DFGLARILNHDTSFAKTFVGTPYYMSPEQ 187
Query: 256 LRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
+ R +Y + D+WS G ++Y L +PPF A +++ +A I GK F R P+ + S E
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK--FRRIPY-RYSDEL 244
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWI 341
E++ ML+ Y+R ++EE+LENP I
Sbjct: 245 NEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 158/281 (56%), Gaps = 18/281 (6%)
Query: 66 QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKI-AKEKLKTEID 124
+LRS+VS G+ KYT +++G+G G + ++ TG+ A +++ +++ K E+
Sbjct: 8 KLRSIVS---VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI 64
Query: 125 IDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAA 184
I+ E+ +MR K+PNIV Y ++Y D +++VME GG L D +V + E
Sbjct: 65 IN----EILVMRE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQI 118
Query: 185 AAVGKTILRIVKVCHENGVMHRDLKPENFLFA-DGSENSQLKAIDFGLSIFFKPGE-QFC 242
AAV + L+ ++ H N V+HRD+K +N L DGS +K DFG P + +
Sbjct: 119 AAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS----VKLTDFGFCAQITPEQSKRS 174
Query: 243 EIVGSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID 301
E+VG+PY+MAPEV+ R+ YGP++D+WS G++ ++ G PP+ E + I
Sbjct: 175 EMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP 234
Query: 302 FERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
++P K+S ++ + LD + R + +E+L++ ++K
Sbjct: 235 ELQNP-EKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 134/297 (45%), Gaps = 33/297 (11%)
Query: 77 GNILDKYTFGKE-LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIM 135
G D Y ++ LG G C + T + YA K I K+ V REVE++
Sbjct: 8 GRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIR---SRVFREVEML 64
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV 195
H N++ E +E++D YLV E GG + I + H+ E A+ V + + +
Sbjct: 65 YQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASAL 124
Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI--------VGS 247
H G+ HRDLKPEN L ++ S +K DFGL K I GS
Sbjct: 125 DFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGS 184
Query: 248 PYYMAPEVLR------RNYGPEIDVWSAGVIIYILLCGVPPF---------WAETEEGIA 292
YMAPEV+ Y D+WS GVI+YILL G PPF W E A
Sbjct: 185 AEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPA 244
Query: 293 ------HAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
+I GK +F W +S AK+L+ +L + RL+ +VL++PW++
Sbjct: 245 CQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQG 301
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 157/281 (55%), Gaps = 18/281 (6%)
Query: 66 QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKI-AKEKLKTEID 124
+LRS+VS G+ KYT +++G+G G + ++ TG+ A +++ +++ K E+
Sbjct: 8 KLRSIVS---VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI 64
Query: 125 IDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAA 184
I+ E+ +MR K+PNIV Y ++Y D +++VME GG L D +V + E
Sbjct: 65 IN----EILVMRE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQI 118
Query: 185 AAVGKTILRIVKVCHENGVMHRDLKPENFLFA-DGSENSQLKAIDFGLSIFFKPGE-QFC 242
AAV + L+ ++ H N V+HRD+K +N L DGS +K DFG P + +
Sbjct: 119 AAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS----VKLTDFGFCAQITPEQSKRS 174
Query: 243 EIVGSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID 301
+VG+PY+MAPEV+ R+ YGP++D+WS G++ ++ G PP+ E + I
Sbjct: 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP 234
Query: 302 FERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
++P K+S ++ + LD + R + +E+L++ ++K
Sbjct: 235 ELQNP-EKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 133/296 (44%), Gaps = 33/296 (11%)
Query: 77 GNILDKYTFGKE-LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIM 135
G D Y ++ LG G C + T + YA K I K+ V REVE++
Sbjct: 8 GRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIR---SRVFREVEML 64
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV 195
H N++ E +E++D YLV E GG + I + H+ E A+ V + + +
Sbjct: 65 YQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASAL 124
Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI--------VGS 247
H G+ HRDLKPEN L ++ S +K DF L K I GS
Sbjct: 125 DFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGS 184
Query: 248 PYYMAPEVLR------RNYGPEIDVWSAGVIIYILLCGVPPF---------WAETEEGIA 292
YMAPEV+ Y D+WS GVI+YILL G PPF W E A
Sbjct: 185 AEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPA 244
Query: 293 ------HAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
+I GK +F W +S AK+L+ +L + RL+ +VL++PW++
Sbjct: 245 CQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 137/267 (51%), Gaps = 10/267 (3%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
+D + G+ LG+G+FG + E ++ A K + K +++ E +RRE+EI HL
Sbjct: 22 IDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHL- 80
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
HPNI+ + D+ IYL++E GEL+ + + E+ A + + + + CH
Sbjct: 81 HHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCH 140
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
V+HRD+KPEN +LK DFG S+ P + + G+ Y+ PE++ R
Sbjct: 141 GKKVIHRDIKPEN---LLLGLKGELKIADFGWSV-HAPSLRRKTMCGTLDYLPPEMIEGR 196
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
+ ++D+W GV+ Y LL G PPF + + I++ + F V A++L+
Sbjct: 197 MHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPAS----VPTGAQDLI 252
Query: 319 KNMLDPNPYNRLTLEEVLENPWIKNDN 345
+L NP RL L +V +PW++ ++
Sbjct: 253 SKLLRHNPSERLPLAQVSAHPWVRANS 279
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 131/252 (51%), Gaps = 12/252 (4%)
Query: 73 NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
NPA+ LD++ K LG G FG +ETG YA K + K+K+ +I+ E
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNE 91
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
I++ + P +V + +++D +Y+VME GGE+F + G ++E A I
Sbjct: 92 KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
+ + H +++RDLKPEN + + +K DFGL+ K + + G+P Y+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGLAKRVKG--RTWXLCGTPEYL 205
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
APE +L + Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 261
Query: 311 SKEAKELVKNML 322
S + K+L++N+L
Sbjct: 262 SSDLKDLLRNLL 273
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 157/281 (55%), Gaps = 18/281 (6%)
Query: 66 QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKI-AKEKLKTEID 124
+LRS+VS G+ KYT +++G+G G + ++ TG+ A +++ +++ K E+
Sbjct: 8 KLRSIVS---VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI 64
Query: 125 IDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAA 184
I+ E+ +MR K+PNIV Y ++Y D +++VME GG L D +V + E
Sbjct: 65 IN----EILVMRE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQI 118
Query: 185 AAVGKTILRIVKVCHENGVMHRDLKPENFLFA-DGSENSQLKAIDFGLSIFFKPGE-QFC 242
AAV + L+ ++ H N V+HRD+K +N L DGS +K DFG P + +
Sbjct: 119 AAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS----VKLTDFGFCAQITPEQSKRS 174
Query: 243 EIVGSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID 301
+VG+PY+MAPEV+ R+ YGP++D+WS G++ ++ G PP+ E + I
Sbjct: 175 XMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP 234
Query: 302 FERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
++P K+S ++ + L+ + R + +E+L++ ++K
Sbjct: 235 ELQNP-EKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLK 274
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 132/225 (58%), Gaps = 17/225 (7%)
Query: 66 QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKI-AKEKLKTEID 124
+LRS+VS G+ KYT +++G+G G + ++ TG+ A +++ +++ K E+
Sbjct: 9 KLRSIVS---VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI 65
Query: 125 IDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAA 184
I+ E+ +MR K+PNIV Y ++Y D +++VME GG L D +V + E
Sbjct: 66 IN----EILVMRE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQI 119
Query: 185 AAVGKTILRIVKVCHENGVMHRDLKPENFLFA-DGSENSQLKAIDFGLSIFFKPGE-QFC 242
AAV + L+ ++ H N V+HRD+K +N L DGS +K DFG P + +
Sbjct: 120 AAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS----VKLTDFGFCAQITPEQSKRS 175
Query: 243 EIVGSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAE 286
+VG+PY+MAPEV+ R+ YGP++D+WS G++ ++ G PP+ E
Sbjct: 176 XMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE 220
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 132/259 (50%), Gaps = 22/259 (8%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
++ + + K LG+G FG E TG YA K + KE + + ++ E ++++
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-T 62
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HP + K A++ D + VME GGELF + + +TE A G I+ ++ H
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG-------EQFCEIVGSPYYMA 252
V++RD+K EN + ++ +K DFGL K G + FC G+P Y+A
Sbjct: 123 SRDVVYRDIKLENLML---DKDGHIKITDFGLC---KEGISDGATMKTFC---GTPEYLA 173
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS 311
PEVL N YG +D W GV++Y ++CG PF+ + E + I+ +I F R +S
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLS 229
Query: 312 KEAKELVKNMLDPNPYNRL 330
EAK L+ +L +P RL
Sbjct: 230 PEAKSLLAGLLKKDPKQRL 248
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 132/259 (50%), Gaps = 22/259 (8%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
++ + + K LG+G FG E TG YA K + KE + + ++ E ++++
Sbjct: 9 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-T 67
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HP + K A++ D + VME GGELF + + +TE A G I+ ++ H
Sbjct: 68 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 127
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG-------EQFCEIVGSPYYMA 252
V++RD+K EN + ++ +K DFGL K G + FC G+P Y+A
Sbjct: 128 SRDVVYRDIKLENLML---DKDGHIKITDFGLC---KEGISDGATMKXFC---GTPEYLA 178
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS 311
PEVL N YG +D W GV++Y ++CG PF+ + E + I+ +I F R +S
Sbjct: 179 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLS 234
Query: 312 KEAKELVKNMLDPNPYNRL 330
EAK L+ +L +P RL
Sbjct: 235 PEAKSLLAGLLKKDPKQRL 253
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 132/259 (50%), Gaps = 22/259 (8%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
++ + + K LG+G FG E TG YA K + KE + + ++ E ++++
Sbjct: 7 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-T 65
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HP + K A++ D + VME GGELF + + +TE A G I+ ++ H
Sbjct: 66 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 125
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG-------EQFCEIVGSPYYMA 252
V++RD+K EN + ++ +K DFGL K G + FC G+P Y+A
Sbjct: 126 SRDVVYRDIKLENLML---DKDGHIKITDFGLC---KEGISDGATMKTFC---GTPEYLA 176
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS 311
PEVL N YG +D W GV++Y ++CG PF+ + E + I+ +I F R +S
Sbjct: 177 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLS 232
Query: 312 KEAKELVKNMLDPNPYNRL 330
EAK L+ +L +P RL
Sbjct: 233 PEAKSLLAGLLKKDPKQRL 251
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 132/259 (50%), Gaps = 22/259 (8%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
++ + + K LG+G FG E TG YA K + KE + + ++ E ++++
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-T 62
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HP + K A++ D + VME GGELF + + +TE A G I+ ++ H
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG-------EQFCEIVGSPYYMA 252
V++RD+K EN + ++ +K DFGL K G + FC G+P Y+A
Sbjct: 123 SRDVVYRDIKLENLML---DKDGHIKITDFGLC---KEGISDGATMKXFC---GTPEYLA 173
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS 311
PEVL N YG +D W GV++Y ++CG PF+ + E + I+ +I F R +S
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLS 229
Query: 312 KEAKELVKNMLDPNPYNRL 330
EAK L+ +L +P RL
Sbjct: 230 PEAKSLLAGLLKKDPKQRL 248
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 132/259 (50%), Gaps = 22/259 (8%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
++ + + K LG+G FG E TG YA K + KE + + ++ E ++++
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-T 62
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HP + K A++ D + VME GGELF + + +TE A G I+ ++ H
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG-------EQFCEIVGSPYYMA 252
V++RD+K EN + ++ +K DFGL K G + FC G+P Y+A
Sbjct: 123 SRDVVYRDIKLENLML---DKDGHIKITDFGLC---KEGISDGATMKTFC---GTPEYLA 173
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS 311
PEVL N YG +D W GV++Y ++CG PF+ + E + I+ +I F R +S
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLS 229
Query: 312 KEAKELVKNMLDPNPYNRL 330
EAK L+ +L +P RL
Sbjct: 230 PEAKSLLAGLLKKDPKQRL 248
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 131/252 (51%), Gaps = 12/252 (4%)
Query: 73 NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
NPA+ LD++ K LG G FG +ETG YA K + K+K+ +I+ E
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNE 91
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
I++ + P +V + +++D +Y+VME GGE+F + G ++E A I
Sbjct: 92 KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
+ + H +++RDLKPEN + + ++ DFGL+ K + + G+P Y+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMI---DQQGYIQVTDFGLAKRVKG--RTWXLCGTPEYL 205
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
APE +L + Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 261
Query: 311 SKEAKELVKNML 322
S + K+L++N+L
Sbjct: 262 SSDLKDLLRNLL 273
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 132/259 (50%), Gaps = 22/259 (8%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
++ + + K LG+G FG E TG YA K + KE + + ++ E ++++
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-T 62
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HP + K A++ D + VME GGELF + + +TE A G I+ ++ H
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG-------EQFCEIVGSPYYMA 252
V++RD+K EN + ++ +K DFGL K G + FC G+P Y+A
Sbjct: 123 SRDVVYRDIKLENLML---DKDGHIKITDFGLC---KEGISDGATMKXFC---GTPEYLA 173
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS 311
PEVL N YG +D W GV++Y ++CG PF+ + E + I+ +I F R +S
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLS 229
Query: 312 KEAKELVKNMLDPNPYNRL 330
EAK L+ +L +P RL
Sbjct: 230 PEAKSLLAGLLKKDPKQRL 248
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 132/259 (50%), Gaps = 22/259 (8%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
++ + + K LG+G FG E TG YA K + KE + + ++ E ++++
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-T 62
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HP + K A++ D + VME GGELF + + +TE A G I+ ++ H
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG-------EQFCEIVGSPYYMA 252
V++RD+K EN + ++ +K DFGL K G + FC G+P Y+A
Sbjct: 123 SRDVVYRDIKLENLML---DKDGHIKITDFGLC---KEGISDGATMKXFC---GTPEYLA 173
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS 311
PEVL N YG +D W GV++Y ++CG PF+ + E + I+ +I F R +S
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLS 229
Query: 312 KEAKELVKNMLDPNPYNRL 330
EAK L+ +L +P RL
Sbjct: 230 PEAKSLLAGLLKKDPKQRL 248
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 130/252 (51%), Gaps = 12/252 (4%)
Query: 73 NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
NPA+ LD++ K LG G FG +ETG YA K + K+K+ I+ E
Sbjct: 33 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
I++ + P +V + +++D +Y+VME GGE+F + G ++E A I
Sbjct: 93 KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
+ + H +++RDLKPEN L + ++ DFG + K G + + G+P Y+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWT-LCGTPEYL 206
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
APE +L + Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 262
Query: 311 SKEAKELVKNML 322
S + K+L++N+L
Sbjct: 263 SSDLKDLLRNLL 274
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 129/252 (51%), Gaps = 12/252 (4%)
Query: 73 NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
NPA+ LD++ K LG G FG +ETG YA K + K+K+ I+ E
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
I++ + P +V + +++D +Y+VME GGE+F + G ++E A I
Sbjct: 92 KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
+ + H +++RDLKPEN + + +K DFG + K + + G+P Y+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYL 205
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
APE +L + Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 261
Query: 311 SKEAKELVKNML 322
S + K+L++N+L
Sbjct: 262 SSDLKDLLRNLL 273
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 130/252 (51%), Gaps = 12/252 (4%)
Query: 73 NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
NPA+ LD++ K LG G FG +ETG YA K + K+K+ I+ E
Sbjct: 18 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 77
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
I++ + P +V + +++D +Y+VME GGE+F + G ++E A I
Sbjct: 78 KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 136
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
+ + H +++RDLKPEN L + ++ DFG + K G + + G+P Y+
Sbjct: 137 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWT-LCGTPEYL 191
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
APE +L + Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F
Sbjct: 192 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HF 247
Query: 311 SKEAKELVKNML 322
S + K+L++N+L
Sbjct: 248 SSDLKDLLRNLL 259
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 129/252 (51%), Gaps = 12/252 (4%)
Query: 73 NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
NPA+ LD++ K LG G FG +ETG YA K + K+K+ I+ E
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
I++ + P +V + +++D +Y+VME GGE+F + G ++E A I
Sbjct: 92 KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
+ + H +++RDLKPEN L + ++ DFG + K + + G+P Y+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYL 205
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
APE +L + Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 261
Query: 311 SKEAKELVKNML 322
S + K+L++N+L
Sbjct: 262 SSDLKDLLRNLL 273
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 129/252 (51%), Gaps = 12/252 (4%)
Query: 73 NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
NPA+ LD++ K LG G FG +ETG YA K + K+K+ I+ E
Sbjct: 33 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
I++ + P +V + +++D +Y+VME GGE+F + G ++E A I
Sbjct: 93 KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
+ + H +++RDLKPEN L + ++ DFG + K + + G+P Y+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYL 206
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
APE +L + Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 262
Query: 311 SKEAKELVKNML 322
S + K+L++N+L
Sbjct: 263 SSDLKDLLRNLL 274
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 131/260 (50%), Gaps = 12/260 (4%)
Query: 73 NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
NPA+ LD++ K LG G FG +ETG YA K + K+K+ I+ E
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
I++ + P +V + +++D +Y+VME GGE+F + G ++E A I
Sbjct: 92 KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
+ + H +++RDLKPEN L + ++ DFG + K + + G+P Y+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYL 205
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
APE +L + Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHF 261
Query: 311 SKEAKELVKNMLDPNPYNRL 330
S + K+L++N+L + R
Sbjct: 262 SSDLKDLLRNLLQVDLTKRF 281
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 129/252 (51%), Gaps = 12/252 (4%)
Query: 73 NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
NPA+ LD++ K LG G FG +ETG YA K + K+K+ I+ E
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
I++ + P +V + +++D +Y+VME GGE+F + G ++E A I
Sbjct: 92 KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
+ + H +++RDLKPEN L + ++ DFG + K + + G+P Y+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYL 205
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
APE +L + Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HF 261
Query: 311 SKEAKELVKNML 322
S + K+L++N+L
Sbjct: 262 SSDLKDLLRNLL 273
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 129/252 (51%), Gaps = 12/252 (4%)
Query: 73 NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
NPA+ LD++ K LG G FG +ETG YA K + K+K+ I+ E
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
I++ + P +V + +++D +Y+VME GGE+F + G ++E A I
Sbjct: 92 KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
+ + H +++RDLKPEN L + ++ DFG + K + + G+P Y+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYL 205
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
APE +L + Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 261
Query: 311 SKEAKELVKNML 322
S + K+L++N+L
Sbjct: 262 SSDLKDLLRNLL 273
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 128/252 (50%), Gaps = 12/252 (4%)
Query: 73 NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
NPA+ LD++ K LG G FG +ETG YA K + K+K+ I+ E
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
I++ + P +V + +++D +Y+VME GGE+F + G + E A I
Sbjct: 92 KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
+ + H +++RDLKPEN + + +K DFG + K + + G+P Y+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYL 205
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
APE +L + Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 261
Query: 311 SKEAKELVKNML 322
S + K+L++N+L
Sbjct: 262 SSDLKDLLRNLL 273
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 129/252 (51%), Gaps = 12/252 (4%)
Query: 73 NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
NPA+ LD++ K +G G FG +ETG YA K + K+K+ I+ E
Sbjct: 32 NPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
I++ + P +V + +++D +Y+VME GGE+F + G ++E A I
Sbjct: 92 KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
+ + H +++RDLKPEN L + +K DFG + K + + G+P Y+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIKVADFGFAKRVKG--RTWXLCGTPEYL 205
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
APE +L + Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 261
Query: 311 SKEAKELVKNML 322
S + K+L++N+L
Sbjct: 262 SSDLKDLLRNLL 273
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 129/252 (51%), Gaps = 12/252 (4%)
Query: 73 NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
NPA+ LD++ K LG G FG +ETG YA K + K+K+ I+ E
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
I++ + P +V + +++D +Y+VME GGE+F + G ++E A I
Sbjct: 92 KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
+ + H +++RDLKPEN + + ++ DFG + K + + G+P Y+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYL 205
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
APE +L + Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 261
Query: 311 SKEAKELVKNML 322
S + K+L++N+L
Sbjct: 262 SSDLKDLLRNLL 273
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 128/252 (50%), Gaps = 12/252 (4%)
Query: 73 NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
NPA+ LD++ K LG G FG +ETG YA K + K+K+ I+ E
Sbjct: 33 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
I++ + P +V + +++D +Y+VME GGE+F + G + E A I
Sbjct: 93 KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 151
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
+ + H +++RDLKPEN L + ++ DFG + K + + G+P Y+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYL 206
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
APE +L + Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 262
Query: 311 SKEAKELVKNML 322
S + K+L++N+L
Sbjct: 263 SSDLKDLLRNLL 274
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 128/252 (50%), Gaps = 12/252 (4%)
Query: 73 NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
NPA+ LD++ K LG G FG +ETG YA K + K+K+ I+ E
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
I++ + P +V + +++D +Y+VME GGE+F + G + E A I
Sbjct: 92 KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
+ + H +++RDLKPEN L + ++ DFG + K + + G+P Y+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYL 205
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
APE +L + Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 261
Query: 311 SKEAKELVKNML 322
S + K+L++N+L
Sbjct: 262 SSDLKDLLRNLL 273
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 128/252 (50%), Gaps = 12/252 (4%)
Query: 73 NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
NPA+ LD++ K LG G FG +ETG YA K + K+K+ I+ E
Sbjct: 33 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
I++ + P + + +++D +Y+VME GGE+F + G ++E A I
Sbjct: 93 KRILQAV-NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
+ + H +++RDLKPEN + + +K DFG + K + + G+P Y+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYL 206
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
APE +L + Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 262
Query: 311 SKEAKELVKNML 322
S + K+L++N+L
Sbjct: 263 SSDLKDLLRNLL 274
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 128/252 (50%), Gaps = 12/252 (4%)
Query: 73 NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
NPA+ LD++ K LG G FG +ETG YA K + K+K+ I+ E
Sbjct: 33 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
I++ + P + + +++D +Y+VME GGE+F + G ++E A I
Sbjct: 93 KRILQAV-NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
+ + H +++RDLKPEN + + +K DFG + K + + G+P Y+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYL 206
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
APE +L + Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 262
Query: 311 SKEAKELVKNML 322
S + K+L++N+L
Sbjct: 263 SSDLKDLLRNLL 274
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 128/252 (50%), Gaps = 12/252 (4%)
Query: 73 NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
NPA+ LD++ K LG G FG +ETG YA K + K+K+ I+ E
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
I++ + P +V + +++D +Y+VME GGE+F + G + E A I
Sbjct: 92 KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
+ + H +++RDLKPEN L + ++ DFG + K + + G+P Y+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYL 205
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
APE +L + Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 261
Query: 311 SKEAKELVKNML 322
S + K+L++N+L
Sbjct: 262 SSDLKDLLRNLL 273
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 132/263 (50%), Gaps = 11/263 (4%)
Query: 71 VSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR 130
++ P ++++ + K LG+G FG E TG YA K + KE + + ++
Sbjct: 138 LAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT 197
Query: 131 EVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKT 190
E ++++ +HP + K +++ D + VME GGELF + + ++E A G
Sbjct: 198 ENRVLQN-SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 256
Query: 191 ILRIVKVCH-ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSP 248
I+ + H E V++RDLK EN + ++ +K DFGL K G G+P
Sbjct: 257 IVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTFCGTP 313
Query: 249 YYMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW 307
Y+APEVL N YG +D W GV++Y ++CG PF+ + E + I+ +I F R
Sbjct: 314 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLG 373
Query: 308 PKVSKEAKELVKNMLDPNPYNRL 330
P EAK L+ +L +P RL
Sbjct: 374 P----EAKSLLSGLLKKDPKQRL 392
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 132/263 (50%), Gaps = 11/263 (4%)
Query: 71 VSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR 130
++ P ++++ + K LG+G FG E TG YA K + KE + + ++
Sbjct: 141 LAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT 200
Query: 131 EVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKT 190
E ++++ +HP + K +++ D + VME GGELF + + ++E A G
Sbjct: 201 ENRVLQN-SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 259
Query: 191 ILRIVKVCH-ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSP 248
I+ + H E V++RDLK EN + ++ +K DFGL K G G+P
Sbjct: 260 IVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTFCGTP 316
Query: 249 YYMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW 307
Y+APEVL N YG +D W GV++Y ++CG PF+ + E + I+ +I F R
Sbjct: 317 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLG 376
Query: 308 PKVSKEAKELVKNMLDPNPYNRL 330
P EAK L+ +L +P RL
Sbjct: 377 P----EAKSLLSGLLKKDPKQRL 395
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 129/252 (51%), Gaps = 12/252 (4%)
Query: 73 NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
NPA+ LD++ K +G G FG +ETG YA K + K+K+ I+ E
Sbjct: 32 NPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
I++ + P +V + +++D +Y+VME GG++F + G ++E A I
Sbjct: 92 KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQI 150
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
+ + H +++RDLKPEN L + +K DFG + K + + G+P Y+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIKVADFGFAKRVKG--RTWXLCGTPEYL 205
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
APE +L + Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HF 261
Query: 311 SKEAKELVKNML 322
S + K+L++N+L
Sbjct: 262 SSDLKDLLRNLL 273
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 127/252 (50%), Gaps = 12/252 (4%)
Query: 73 NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
NPA+ LD++ K LG G FG +ETG YA K + K+K+ I+ E
Sbjct: 33 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
I++ + P + + +++D +Y+VME GGE+F + G + E A I
Sbjct: 93 KRILQAV-NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQI 151
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
+ + H +++RDLKPEN + + +K DFG + K + + G+P Y+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYL 206
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
APE +L + Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 262
Query: 311 SKEAKELVKNML 322
S + K+L++N+L
Sbjct: 263 SSDLKDLLRNLL 274
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 129/252 (51%), Gaps = 12/252 (4%)
Query: 73 NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
NPA+ LD++ K +G G FG +ETG YA K + K+K+ I+ E
Sbjct: 32 NPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
I++ + P +V + +++D +Y+VME GG++F + G ++E A I
Sbjct: 92 KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQI 150
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
+ + H +++RDLKPEN L + +K DFG + K + + G+P Y+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIKVADFGFAKRVKG--RTWXLCGTPEYL 205
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
APE +L + Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HF 261
Query: 311 SKEAKELVKNML 322
S + K+L++N+L
Sbjct: 262 SSDLKDLLRNLL 273
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/259 (31%), Positives = 127/259 (49%), Gaps = 12/259 (4%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
+ + FGK LG G F T E+ T YA K + K + E + V RE ++M L
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 88
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
HP V ++D + +Y + + GEL I G + E I+ ++ H
Sbjct: 89 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
G++HRDLKPEN L +E+ ++ DFG + P + VG+ Y++PE+L
Sbjct: 149 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
++ D+W+ G IIY L+ G+PPF A E I II+ + DF +PK A++
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARD 261
Query: 317 LVKNMLDPNPYNRLTLEEV 335
LV+ +L + RL EE+
Sbjct: 262 LVEKLLVLDATKRLGCEEM 280
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 131/225 (58%), Gaps = 17/225 (7%)
Query: 66 QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKI-AKEKLKTEID 124
+LR +VS G+ KYT +++G+G G + ++ TG+ A +++ +++ K E+
Sbjct: 9 KLRIIVS---VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI 65
Query: 125 IDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAA 184
I+ E+ +MR K+PNIV Y ++Y D +++VME GG L D +V + E
Sbjct: 66 IN----EILVMRE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQI 119
Query: 185 AAVGKTILRIVKVCHENGVMHRDLKPENFLFA-DGSENSQLKAIDFGLSIFFKPGE-QFC 242
AAV + L+ ++ H N V+HR++K +N L DGS +K DFG P + +
Sbjct: 120 AAVCRECLQALEFLHSNQVIHRNIKSDNILLGMDGS----VKLTDFGFCAQITPEQSKRS 175
Query: 243 EIVGSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAE 286
+VG+PY+MAPEV+ R+ YGP++D+WS G++ ++ G PP+ E
Sbjct: 176 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE 220
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 129/254 (50%), Gaps = 11/254 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
++++ + K LG+G FG E TG YA K + KE + + ++ E ++++
Sbjct: 8 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-S 66
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HP + K +++ D + VME GGELF + + ++E A G I+ + H
Sbjct: 67 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 126
Query: 200 -ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSPYYMAPEVLR 257
E V++RDLK EN + ++ +K DFGL K G G+P Y+APEVL
Sbjct: 127 SEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE 183
Query: 258 RN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
N YG +D W GV++Y ++CG PF+ + E + I+ +I F R P EAK
Sbjct: 184 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGP----EAKS 239
Query: 317 LVKNMLDPNPYNRL 330
L+ +L +P RL
Sbjct: 240 LLSGLLKKDPKQRL 253
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 128/252 (50%), Gaps = 12/252 (4%)
Query: 73 NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
NPA+ LD++ K LG G FG ETG +A K + K+K+ I+ E
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNE 91
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
I++ + P +V + +++D +Y+VME GGE+F + G ++E A I
Sbjct: 92 KRILQAV-NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
+ + H +++RDLKPEN L + ++ DFG + K + + G+P Y+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYL 205
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
APE +L + Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 261
Query: 311 SKEAKELVKNML 322
S + K+L++N+L
Sbjct: 262 SSDLKDLLRNLL 273
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 129/254 (50%), Gaps = 11/254 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
++++ + K LG+G FG E TG YA K + KE + + ++ E ++++
Sbjct: 7 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-S 65
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HP + K +++ D + VME GGELF + + ++E A G I+ + H
Sbjct: 66 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 125
Query: 200 -ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSPYYMAPEVLR 257
E V++RDLK EN + ++ +K DFGL K G G+P Y+APEVL
Sbjct: 126 SEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE 182
Query: 258 RN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
N YG +D W GV++Y ++CG PF+ + E + I+ +I F R P EAK
Sbjct: 183 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGP----EAKS 238
Query: 317 LVKNMLDPNPYNRL 330
L+ +L +P RL
Sbjct: 239 LLSGLLKKDPKQRL 252
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 128/252 (50%), Gaps = 12/252 (4%)
Query: 73 NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
NPA+ LD++ K LG G FG ETG +A K + K+K+ I+ E
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNE 91
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
I++ + P +V + +++D +Y+VME GGE+F + G ++E A I
Sbjct: 92 KRILQAV-NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
+ + H +++RDLKPEN L + ++ DFG + K + + G+P Y+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYL 205
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
APE +L + Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HF 261
Query: 311 SKEAKELVKNML 322
S + K+L++N+L
Sbjct: 262 SSDLKDLLRNLL 273
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 128/252 (50%), Gaps = 12/252 (4%)
Query: 73 NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
NPA+ LD++ K LG G FG ETG +A K + K+K+ I+ E
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNE 91
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
I++ + P +V + +++D +Y+VME GGE+F + G ++E A I
Sbjct: 92 KRILQAV-NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
+ + H +++RDLKPEN L + ++ DFG + K + + G+P Y+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYL 205
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
APE +L + Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HF 261
Query: 311 SKEAKELVKNML 322
S + K+L++N+L
Sbjct: 262 SSDLKDLLRNLL 273
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 129/254 (50%), Gaps = 11/254 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
++++ + K LG+G FG E TG YA K + KE + + ++ E ++++
Sbjct: 9 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-S 67
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HP + K +++ D + VME GGELF + + ++E A G I+ + H
Sbjct: 68 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 127
Query: 200 -ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSPYYMAPEVLR 257
E V++RDLK EN + ++ +K DFGL K G G+P Y+APEVL
Sbjct: 128 SEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE 184
Query: 258 RN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
N YG +D W GV++Y ++CG PF+ + E + I+ +I F R P EAK
Sbjct: 185 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGP----EAKS 240
Query: 317 LVKNMLDPNPYNRL 330
L+ +L +P RL
Sbjct: 241 LLSGLLKKDPKQRL 254
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 128/252 (50%), Gaps = 12/252 (4%)
Query: 73 NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
+PA+ LD++ K LG G FG ETG YA K + K+K+ I+ E
Sbjct: 33 SPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
I++ + P +V + +++D +Y+VME GGE+F + G ++E A I
Sbjct: 93 KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
+ + H +++RDLKPEN + + +K DFG + K + + G+P Y+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYL 206
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
APE +L + Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 262
Query: 311 SKEAKELVKNML 322
S + K+L++N+L
Sbjct: 263 SSDLKDLLRNLL 274
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 129/252 (51%), Gaps = 12/252 (4%)
Query: 73 NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
+PA+ LD++ K LG G FG ETG YA K + K+K+ I+ E
Sbjct: 25 SPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE 84
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
I++ + P +V + +++D +Y+VME GGE+F + G ++E A I
Sbjct: 85 KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 143
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
+ + H +++RDLKPEN L + ++ DFG + K G + + G+P Y+
Sbjct: 144 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYL 198
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
APE +L + Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F
Sbjct: 199 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HF 254
Query: 311 SKEAKELVKNML 322
S + K+L++N+L
Sbjct: 255 SSDLKDLLRNLL 266
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 128/252 (50%), Gaps = 12/252 (4%)
Query: 73 NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
+PA+ LD++ K LG G FG ETG YA K + K+K+ I+ E
Sbjct: 33 SPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
I++ + P +V + +++D +Y+VME GGE+F + G ++E A I
Sbjct: 93 KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
+ + H +++RDLKPEN L + ++ DFG + K + + G+P Y+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYL 206
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
APE +L + Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 262
Query: 311 SKEAKELVKNML 322
S + K+L++N+L
Sbjct: 263 SSDLKDLLRNLL 274
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 128/252 (50%), Gaps = 12/252 (4%)
Query: 73 NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
+PA+ LD++ K LG G FG ETG YA K + K+K+ I+ E
Sbjct: 33 SPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
I++ + P +V + +++D +Y+VME GGE+F + G ++E A I
Sbjct: 93 KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
+ + H +++RDLKPEN L + ++ DFG + K + + G+P Y+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYL 206
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
APE +L + Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 262
Query: 311 SKEAKELVKNML 322
S + K+L++N+L
Sbjct: 263 SSDLKDLLRNLL 274
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 128/252 (50%), Gaps = 12/252 (4%)
Query: 73 NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
+PA+ LD++ K LG G FG ETG YA K + K+K+ I+ E
Sbjct: 53 SPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE 112
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
I++ + P +V + +++D +Y+VME GGE+F + G ++E A I
Sbjct: 113 KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 171
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
+ + H +++RDLKPEN L + ++ DFG + K + + G+P Y+
Sbjct: 172 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYL 226
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
APE +L + Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F
Sbjct: 227 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 282
Query: 311 SKEAKELVKNML 322
S + K+L++N+L
Sbjct: 283 SSDLKDLLRNLL 294
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 128/252 (50%), Gaps = 12/252 (4%)
Query: 73 NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
+PA+ LD++ K LG G FG ETG YA K + K+K+ I+ E
Sbjct: 33 SPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
I++ + P +V + +++D +Y+VME GGE+F + G ++E A I
Sbjct: 93 KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
+ + H +++RDLKPEN L + ++ DFG + K + + G+P Y+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYL 206
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
APE +L + Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 262
Query: 311 SKEAKELVKNML 322
S + K+L++N+L
Sbjct: 263 SSDLKDLLRNLL 274
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 155/301 (51%), Gaps = 17/301 (5%)
Query: 52 SKHASNVDKKSISF-QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYA 110
+K +++VD KS ++ V+ +P + +Y G+ LG+G F ++ +++T E +A
Sbjct: 15 AKPSAHVDPKSAPLKEIPDVLVDP---RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFA 71
Query: 111 CKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELF 170
K + K L + + E+ I + L +P++V + +ED D +Y+V+E+C L
Sbjct: 72 GKVVPKSMLLKPHQKEKMSTEIAIHKSL-DNPHVVGFHGFFEDDDFVYVVLEICRRRSLL 130
Query: 171 DRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
+ + TE A + ++ V+ H N V+HRDLK N D + +K DFG
Sbjct: 131 ELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLND---DMDVKIGDFG 187
Query: 231 LS--IFFKPGEQFCEIVGSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAET 287
L+ I F GE+ ++ G+P Y+APEVL ++ + E+D+WS G I+Y LL G PPF
Sbjct: 188 LATKIEFD-GERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSC 246
Query: 288 EEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHA 347
+ I + + R ++ A L++ ML +P R ++ E+L + + +A
Sbjct: 247 LKETYIRIKKNEYSVPR----HINPVASALIRRMLHADPTLRPSVAELLTDEFF-TSGYA 301
Query: 348 P 348
P
Sbjct: 302 P 302
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 143/271 (52%), Gaps = 22/271 (8%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
++KY +++G G FG E G Y K+I ++ ++ + ++ RREV ++ ++
Sbjct: 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSK-EREESRREVAVLANM- 80
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKG-HYTERAAAAVGKTILRIVKV 197
KHPNIV Y+E++E+ ++Y+VM+ CEGG+LF RI KG + E I +K
Sbjct: 81 KHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKH 140
Query: 198 CHENGVMHRDLKPEN-FLFADGSENSQLKAIDFGLSIFFKPGEQFCE-IVGSPYYMAPEV 255
H+ ++HRD+K +N FL DG+ ++ DFG++ + +G+PYY++PE+
Sbjct: 141 VHDRKILHRDIKSQNIFLTKDGT----VQLGDFGIARVLNSTVELARACIGTPYYLSPEI 196
Query: 256 LR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV---- 310
+ Y + D+W+ G ++Y L F A + + + II G +P V
Sbjct: 197 CENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGS-------FPPVSLHY 249
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
S + + LV + NP +R ++ +LE +I
Sbjct: 250 SYDLRSLVSQLFKRNPRDRPSVNSILEKGFI 280
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
+ + FGK LG G F E+ T YA K + K + E + V RE ++M L
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 88
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
HP V ++D + +Y + + GEL I G + E I+ ++ H
Sbjct: 89 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
G++HRDLKPEN L +E+ ++ DFG + P + VG+ Y++PE+L
Sbjct: 149 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLT 205
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
++ D+W+ G IIY L+ G+PPF A E I II+ + DF +PK A++
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARD 261
Query: 317 LVKNMLDPNPYNRLTLEEV 335
LV+ +L + RL EE+
Sbjct: 262 LVEKLLVLDATKRLGCEEM 280
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 128/252 (50%), Gaps = 12/252 (4%)
Query: 73 NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
+PA+ LD++ K LG G FG ETG YA K + K+K+ I+ E
Sbjct: 25 SPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE 84
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
I++ + P +V + +++D +Y+VME GGE+F + G + E A I
Sbjct: 85 KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 143
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
+ + H +++RDLKPEN L + ++ DFG + K G + + G+P Y+
Sbjct: 144 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYL 198
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
APE +L + Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F
Sbjct: 199 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HF 254
Query: 311 SKEAKELVKNML 322
S + K+L++N+L
Sbjct: 255 SSDLKDLLRNLL 266
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
+ + FGK LG G F E+ T YA K + K + E + V RE ++M L
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 90
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
HP V ++D + +Y + + GEL I G + E I+ ++ H
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
G++HRDLKPEN L +E+ ++ DFG + P + VG+ Y++PE+L
Sbjct: 151 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
++ D+W+ G IIY L+ G+PPF A E I II+ + DF +PK A++
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARD 263
Query: 317 LVKNMLDPNPYNRLTLEEV 335
LV+ +L + RL EE+
Sbjct: 264 LVEKLLVLDATKRLGCEEM 282
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
+ + FGK LG G F E+ T YA K + K + E + V RE ++M L
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 91
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
HP V ++D + +Y + + GEL I G + E I+ ++ H
Sbjct: 92 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 151
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
G++HRDLKPEN L +E+ ++ DFG + P + VG+ Y++PE+L
Sbjct: 152 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 208
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
++ D+W+ G IIY L+ G+PPF A E I II+ + DF +PK A++
Sbjct: 209 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARD 264
Query: 317 LVKNMLDPNPYNRLTLEEV 335
LV+ +L + RL EE+
Sbjct: 265 LVEKLLVLDATKRLGCEEM 283
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
+ + FGK LG G F E+ T YA K + K + E + V RE ++M L
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 88
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
HP V ++D + +Y + + GEL I G + E I+ ++ H
Sbjct: 89 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
G++HRDLKPEN L +E+ ++ DFG + P + VG+ Y++PE+L
Sbjct: 149 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
++ D+W+ G IIY L+ G+PPF A E I II+ + DF +PK A++
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARD 261
Query: 317 LVKNMLDPNPYNRLTLEEV 335
LV+ +L + RL EE+
Sbjct: 262 LVEKLLVLDATKRLGCEEM 280
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
+ + FGK LG G F E+ T YA K + K + E + V RE ++M L
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 88
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
HP V ++D + +Y + + GEL I G + E I+ ++ H
Sbjct: 89 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
G++HRDLKPEN L +E+ ++ DFG + P + VG+ Y++PE+L
Sbjct: 149 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
++ D+W+ G IIY L+ G+PPF A E I II+ + DF +PK A++
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARD 261
Query: 317 LVKNMLDPNPYNRLTLEEV 335
LV+ +L + RL EE+
Sbjct: 262 LVEKLLVLDATKRLGCEEM 280
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
+ + FGK LG G F E+ T YA K + K + E + V RE ++M L
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 90
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
HP V ++D + +Y + + GEL I G + E I+ ++ H
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
G++HRDLKPEN L +E+ ++ DFG + P + VG+ Y++PE+L
Sbjct: 151 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
++ D+W+ G IIY L+ G+PPF A E I II+ + DF +PK A++
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARD 263
Query: 317 LVKNMLDPNPYNRLTLEEV 335
LV+ +L + RL EE+
Sbjct: 264 LVEKLLVLDATKRLGCEEM 282
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
+ + FGK LG G F E+ T YA K + K + E + V RE ++M L
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 87
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
HP V ++D + +Y + + GEL I G + E I+ ++ H
Sbjct: 88 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 147
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
G++HRDLKPEN L +E+ ++ DFG + P + VG+ Y++PE+L
Sbjct: 148 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 204
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
++ D+W+ G IIY L+ G+PPF A E I II+ + DF +PK A++
Sbjct: 205 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARD 260
Query: 317 LVKNMLDPNPYNRLTLEEV 335
LV+ +L + RL EE+
Sbjct: 261 LVEKLLVLDATKRLGCEEM 279
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 124/244 (50%), Gaps = 11/244 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
LD++ K LG G FG E+G YA K + K+K+ I+ E I++ +
Sbjct: 27 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 85
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
P +V + +++D +Y+VME GGE+F + G ++E A I+ + H
Sbjct: 86 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 145
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-VLRR 258
+++RDLKPEN L E ++ DFG + K + + G+P Y+APE +L +
Sbjct: 146 SLDLIYRDLKPENLLI---DEQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSK 200
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F S + K+L+
Sbjct: 201 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLL 256
Query: 319 KNML 322
+N+L
Sbjct: 257 RNLL 260
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 154/301 (51%), Gaps = 17/301 (5%)
Query: 52 SKHASNVDKKSISF-QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYA 110
+K +++VD KS ++ V+ +P + +Y G+ LG+G F ++ +++T E +A
Sbjct: 15 AKPSAHVDPKSAPLKEIPDVLVDP---RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFA 71
Query: 111 CKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELF 170
K + K L + + E+ I + L +P++V + +ED D +Y+V+E+C L
Sbjct: 72 GKVVPKSMLLKPHQKEKMSTEIAIHKSL-DNPHVVGFHGFFEDDDFVYVVLEICRRRSLL 130
Query: 171 DRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
+ + TE A + ++ V+ H N V+HRDLK N D + +K DFG
Sbjct: 131 ELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLND---DMDVKIGDFG 187
Query: 231 LS--IFFKPGEQFCEIVGSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAET 287
L+ I F GE+ + G+P Y+APEVL ++ + E+D+WS G I+Y LL G PPF
Sbjct: 188 LATKIEFD-GERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSC 246
Query: 288 EEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHA 347
+ I + + R ++ A L++ ML +P R ++ E+L + + +A
Sbjct: 247 LKETYIRIKKNEYSVPR----HINPVASALIRRMLHADPTLRPSVAELLTDEFF-TSGYA 301
Query: 348 P 348
P
Sbjct: 302 P 302
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 154/301 (51%), Gaps = 17/301 (5%)
Query: 52 SKHASNVDKKSISF-QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYA 110
+K +++VD KS ++ V+ +P + +Y G+ LG+G F ++ +++T E +A
Sbjct: 15 AKPSAHVDPKSAPLKEIPDVLVDP---RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFA 71
Query: 111 CKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELF 170
K + K L + + E+ I + L +P++V + +ED D +Y+V+E+C L
Sbjct: 72 GKVVPKSMLLKPHQKEKMSTEIAIHKSL-DNPHVVGFHGFFEDDDFVYVVLEICRRRSLL 130
Query: 171 DRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
+ + TE A + ++ V+ H N V+HRDLK N D + +K DFG
Sbjct: 131 ELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLND---DMDVKIGDFG 187
Query: 231 LS--IFFKPGEQFCEIVGSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAET 287
L+ I F GE+ + G+P Y+APEVL ++ + E+D+WS G I+Y LL G PPF
Sbjct: 188 LATKIEFD-GERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSC 246
Query: 288 EEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHA 347
+ I + + R ++ A L++ ML +P R ++ E+L + + +A
Sbjct: 247 LKETYIRIKKNEYSVPR----HINPVASALIRRMLHADPTLRPSVAELLTDEFF-TSGYA 301
Query: 348 P 348
P
Sbjct: 302 P 302
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
+ + FGK LG G F E+ T YA K + K + E + V RE ++M L
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 91
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
HP V ++D + +Y + + GEL I G + E I+ ++ H
Sbjct: 92 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 151
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
G++HRDLKPEN L +E+ ++ DFG + P + VG+ Y++PE+L
Sbjct: 152 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 208
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
++ D+W+ G IIY L+ G+PPF A E I II+ + DF +PK A++
Sbjct: 209 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARD 264
Query: 317 LVKNMLDPNPYNRLTLEEV 335
LV+ +L + RL EE+
Sbjct: 265 LVEKLLVLDATKRLGCEEM 283
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 127/259 (49%), Gaps = 21/259 (8%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
+D + F + LG+G FG ETG+ YA K + K+ + + D++ E I+
Sbjct: 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR 81
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
HP + ++ D ++ VME GG+L I + E A I+ + H
Sbjct: 82 NHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLH 141
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG-------EQFCEIVGSPYYMA 252
+ G+++RDLK +N L K DFG+ K G FC G+P Y+A
Sbjct: 142 DKGIIYRDLKLDNVLL---DHEGHCKLADFGMC---KEGICNGVTTATFC---GTPDYIA 192
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS 311
PE+L+ YGP +D W+ GV++Y +LCG PF AE E+ + AI+ ++ + W +
Sbjct: 193 PEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT--W--LH 248
Query: 312 KEAKELVKNMLDPNPYNRL 330
++A ++K+ + NP RL
Sbjct: 249 EDATGILKSFMTKNPTMRL 267
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 123/244 (50%), Gaps = 11/244 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
LD++ K LG G FG E+G YA K + K+K+ I+ E I++ +
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 119
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
P +V + +++D +Y+VME GGE+F + G ++E A I+ + H
Sbjct: 120 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 179
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-VLRR 258
+++RDLKPEN L + ++ DFG + K + G+P Y+APE +L +
Sbjct: 180 SLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGAT--WTLCGTPEYLAPEIILSK 234
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F S + K+L+
Sbjct: 235 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLL 290
Query: 319 KNML 322
+N+L
Sbjct: 291 RNLL 294
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
+ + FGK LG G F E+ T YA K + K + E + V RE ++M L
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 87
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
HP V ++D + +Y + + GEL I G + E I+ ++ H
Sbjct: 88 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 147
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
G++HRDLKPEN L +E+ ++ DFG + P + VG+ Y++PE+L
Sbjct: 148 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 204
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
++ D+W+ G IIY L+ G+PPF A E I II+ + DF +PK A++
Sbjct: 205 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARD 260
Query: 317 LVKNMLDPNPYNRLTLEEV 335
LV+ +L + RL EE+
Sbjct: 261 LVEKLLVLDATKRLGCEEM 279
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
+ + FGK LG G F E+ T YA K + K + E + V RE ++M L
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 90
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
HP V ++D + +Y + + GEL I G + E I+ ++ H
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
G++HRDLKPEN L +E+ ++ DFG + P + VG+ Y++PE+L
Sbjct: 151 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
++ D+W+ G IIY L+ G+PPF A E I II+ + DF +PK A++
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARD 263
Query: 317 LVKNMLDPNPYNRLTLEEV 335
LV+ +L + RL EE+
Sbjct: 264 LVEKLLVLDATKRLGCEEM 282
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
+ + FGK LG G F E+ T YA K + K + E + V RE ++M L
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 95
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
HP V ++D + +Y + + GEL I G + E I+ ++ H
Sbjct: 96 HPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 155
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
G++HRDLKPEN L +E+ ++ DFG + P + VG+ Y++PE+L
Sbjct: 156 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 212
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
++ D+W+ G IIY L+ G+PPF A E I II+ + DF +PK A++
Sbjct: 213 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARD 268
Query: 317 LVKNMLDPNPYNRLTLEEV 335
LV+ +L + RL EE+
Sbjct: 269 LVEKLLVLDATKRLGCEEM 287
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
+ + FGK LG G F E+ T YA K + K + E + V RE ++M L
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 90
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
HP V ++D + +Y + + GEL I G + E I+ ++ H
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
G++HRDLKPEN L +E+ ++ DFG + P + VG+ Y++PE+L
Sbjct: 151 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
++ D+W+ G IIY L+ G+PPF A E I II+ + DF +PK A++
Sbjct: 208 EKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPK----ARD 263
Query: 317 LVKNMLDPNPYNRLTLEEV 335
LV+ +L + RL EE+
Sbjct: 264 LVEKLLVLDATKRLGCEEM 282
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 124/244 (50%), Gaps = 11/244 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
LD++ K LG G FG E+G YA K + K+K+ I+ E I++ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
P +V + +++D +Y+VME GGE+F + G ++E A I+ + H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-VLRR 258
+++RDLKPEN L + ++ DFG + K + + G+P Y+APE +L +
Sbjct: 159 SLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSK 213
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F S + K+L+
Sbjct: 214 GYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLL 269
Query: 319 KNML 322
+N+L
Sbjct: 270 RNLL 273
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 124/244 (50%), Gaps = 11/244 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
LD++ K LG G FG E+G YA K + K+K+ I+ E I++ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
P +V + +++D +Y+VME GGE+F + G ++E A I+ + H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-VLRR 258
+++RDLKPEN L + ++ DFG + K + + G+P Y+APE +L +
Sbjct: 159 SLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLAGTPEYLAPEIILSK 213
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F S + K+L+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLL 269
Query: 319 KNML 322
+N+L
Sbjct: 270 RNLL 273
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
+ + FGK LG G F E+ T YA K + K + E + V RE ++M L
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 72
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
HP V ++D + +Y + + GEL I G + E I+ ++ H
Sbjct: 73 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 132
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
G++HRDLKPEN L +E+ ++ DFG + P + VG+ Y++PE+L
Sbjct: 133 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 189
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
++ D+W+ G IIY L+ G+PPF A E I II+ + DF +PK A++
Sbjct: 190 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARD 245
Query: 317 LVKNMLDPNPYNRLTLEEV 335
LV+ +L + RL EE+
Sbjct: 246 LVEKLLVLDATKRLGCEEM 264
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
+ + FGK LG G F E+ T YA K + K + E + V RE ++M L
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 65
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
HP V ++D + +Y + + GEL I G + E I+ ++ H
Sbjct: 66 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 125
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
G++HRDLKPEN L +E+ ++ DFG + P + VG+ Y++PE+L
Sbjct: 126 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 182
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
++ D+W+ G IIY L+ G+PPF A E I II+ + DF +PK A++
Sbjct: 183 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARD 238
Query: 317 LVKNMLDPNPYNRLTLEEV 335
LV+ +L + RL EE+
Sbjct: 239 LVEKLLVLDATKRLGCEEM 257
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
+ + FGK LG G F E+ T YA K + K + E + V RE ++M L
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 66
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
HP V ++D + +Y + + GEL I G + E I+ ++ H
Sbjct: 67 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 126
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
G++HRDLKPEN L +E+ ++ DFG + P + VG+ Y++PE+L
Sbjct: 127 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 183
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
++ D+W+ G IIY L+ G+PPF A E I II+ + DF +PK A++
Sbjct: 184 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARD 239
Query: 317 LVKNMLDPNPYNRLTLEEV 335
LV+ +L + RL EE+
Sbjct: 240 LVEKLLVLDATKRLGCEEM 258
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 124/244 (50%), Gaps = 11/244 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
LD++ K LG G FG E+G YA K + K+K+ I+ E I++ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
P +V + +++D +Y+VME GGE+F + G ++E A I+ + H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-VLRR 258
+++RDLKPEN L + ++ DFG + K + + G+P Y+APE +L +
Sbjct: 159 SLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLXGTPEYLAPEIILSK 213
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F S + K+L+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLL 269
Query: 319 KNML 322
+N+L
Sbjct: 270 RNLL 273
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 124/244 (50%), Gaps = 11/244 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
LD++ K LG G FG E+G YA K + K+K+ I+ E I++ +
Sbjct: 41 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 99
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
P +V + +++D +Y+VME GGE+F + G ++E A I+ + H
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-VLRR 258
+++RDLKPEN L + ++ DFG + K + + G+P Y+APE +L +
Sbjct: 160 SLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSK 214
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F S + K+L+
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLL 270
Query: 319 KNML 322
+N+L
Sbjct: 271 RNLL 274
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
+ + FGK LG G F E+ T YA K + K + E + V RE ++M L
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 93
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
HP V ++D + +Y + + GEL I G + E I+ ++ H
Sbjct: 94 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 153
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
G++HRDLKPEN L +E+ ++ DFG + P + VG+ Y++PE+L
Sbjct: 154 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 210
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
++ D+W+ G IIY L+ G+PPF A E I II+ + DF +PK A++
Sbjct: 211 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFPK----ARD 266
Query: 317 LVKNMLDPNPYNRLTLEEV 335
LV+ +L + RL EE+
Sbjct: 267 LVEKLLVLDATKRLGCEEM 285
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 124/244 (50%), Gaps = 11/244 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
LD++ K LG G FG E+G YA K + K+K+ I+ E I++ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
P +V + +++D +Y+VME GGE+F + G ++E A I+ + H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-VLRR 258
+++RDLKPEN L + ++ DFG + K + + G+P Y+APE +L +
Sbjct: 159 SLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSK 213
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F S + K+L+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLL 269
Query: 319 KNML 322
+N+L
Sbjct: 270 RNLL 273
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 124/244 (50%), Gaps = 11/244 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
LD++ K LG G FG E+G YA K + K+K+ I+ E I++ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
P +V + +++D +Y+VME GGE+F + G ++E A I+ + H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-VLRR 258
+++RDLKPEN L + ++ DFG + K + + G+P Y+APE +L +
Sbjct: 159 SLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSK 213
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F S + K+L+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLL 269
Query: 319 KNML 322
+N+L
Sbjct: 270 RNLL 273
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 124/244 (50%), Gaps = 11/244 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
LD++ K LG G FG E+G YA K + K+K+ I+ E I++ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
P +V + +++D +Y+VME GGE+F + G ++E A I+ + H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-VLRR 258
+++RDLKPEN L + ++ DFG + K + + G+P Y+APE +L +
Sbjct: 159 SLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSK 213
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F S + K+L+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLL 269
Query: 319 KNML 322
+N+L
Sbjct: 270 RNLL 273
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
+ + FGK LG G F E+ T YA K + K + E + V RE ++M L
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 67
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
HP V ++D + +Y + + GEL I G + E I+ ++ H
Sbjct: 68 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 127
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
G++HRDLKPEN L +E+ ++ DFG + P + VG+ Y++PE+L
Sbjct: 128 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 184
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
++ D+W+ G IIY L+ G+PPF A E I II+ + DF +PK A++
Sbjct: 185 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARD 240
Query: 317 LVKNMLDPNPYNRLTLEEV 335
LV+ +L + RL EE+
Sbjct: 241 LVEKLLVLDATKRLGCEEM 259
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
+ + FGK LG G F E+ T YA K + K + E + V RE ++M L
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 68
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
HP V ++D + +Y + + GEL I G + E I+ ++ H
Sbjct: 69 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 128
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
G++HRDLKPEN L +E+ ++ DFG + P + VG+ Y++PE+L
Sbjct: 129 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 185
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
++ D+W+ G IIY L+ G+PPF A E I II+ + DF +PK A++
Sbjct: 186 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARD 241
Query: 317 LVKNMLDPNPYNRLTLEEV 335
LV+ +L + RL EE+
Sbjct: 242 LVEKLLVLDATKRLGCEEM 260
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
+ + FGK LG G F E+ T YA K + K + E + V RE ++M L
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 90
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
HP V ++D + +Y + + GEL I G + E I+ ++ H
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
G++HRDLKPEN L +E+ ++ DFG + P + VG+ Y++PE+L
Sbjct: 151 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
++ D+W+ G IIY L+ G+PPF A E I II+ + DF +PK A++
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPK----ARD 263
Query: 317 LVKNMLDPNPYNRLTLEEV 335
LV+ +L + RL EE+
Sbjct: 264 LVEKLLVLDATKRLGCEEM 282
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 124/244 (50%), Gaps = 11/244 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
LD++ K LG G FG E+G YA K + K+K+ I+ E I++ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
P +V + +++D +Y+VME GGE+F + G ++E A I+ + H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-VLRR 258
+++RDLKPEN L + ++ DFG + K + + G+P Y+APE +L +
Sbjct: 159 SLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSK 213
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F S + K+L+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLL 269
Query: 319 KNML 322
+N+L
Sbjct: 270 RNLL 273
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 124/244 (50%), Gaps = 11/244 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
LD++ K LG G FG E+G YA K + K+K+ I+ E I++ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
P +V + +++D +Y+VME GGE+F + G ++E A I+ + H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-VLRR 258
+++RDLKPEN L + ++ DFG + K + + G+P Y+APE +L +
Sbjct: 159 SLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSK 213
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F S + K+L+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFP----SHFSSDLKDLL 269
Query: 319 KNML 322
+N+L
Sbjct: 270 RNLL 273
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 140/292 (47%), Gaps = 37/292 (12%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEI---------------- 123
L++YT E+G+G +G+ + YA K ++K+KL +
Sbjct: 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPG 71
Query: 124 -------DIDDVRREVEIMRHLPKHPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIV 174
I+ V +E+ I++ L HPN+V E +D +D +Y+V EL G + + +
Sbjct: 72 GCIQPRGPIEQVYQEIAILKKL-DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME-VP 129
Query: 175 NKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF 234
+E A + +++ ++ H ++HRD+KP N L E+ +K DFG+S
Sbjct: 130 TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVG---EDGHIKIADFGVSNE 186
Query: 235 FKPGEQFCE-IVGSPYYMAPEVLRRNY----GPEIDVWSAGVIIYILLCGVPPFWAETEE 289
FK + VG+P +MAPE L G +DVW+ GV +Y + G PF E
Sbjct: 187 FKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIM 246
Query: 290 GIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
+ I ++F P ++++ K+L+ MLD NP +R+ + E+ +PW+
Sbjct: 247 CLHSKIKSQALEFPDQP--DIAEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 127/252 (50%), Gaps = 12/252 (4%)
Query: 73 NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
+PA+ LD++ + LG G FG ETG YA K + K+K+ I+ E
Sbjct: 33 SPAQNTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
I + + P +V + +++D +Y+V+E GGE+F + G ++E A I
Sbjct: 93 KRIQQAV-NFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
+ + H +++RDLKPEN L + +K DFG + K + + G+P Y+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIKVADFGFAKRVKG--RTWXLCGTPEYL 206
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
APE +L + Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 262
Query: 311 SKEAKELVKNML 322
S + K+L++N+L
Sbjct: 263 SSDLKDLLRNLL 274
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 123/244 (50%), Gaps = 11/244 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
LD++ K LG G FG E+G YA K + K+K+ I+ E I++ +
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 119
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
P +V + +++D +Y+VME GGE+F + G + E A I+ + H
Sbjct: 120 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 179
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-VLRR 258
+++RDLKPEN L + ++ DFG + K + + G+P Y+APE +L +
Sbjct: 180 SLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSK 234
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F S + K+L+
Sbjct: 235 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLL 290
Query: 319 KNML 322
+N+L
Sbjct: 291 RNLL 294
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 123/244 (50%), Gaps = 11/244 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
LD++ K LG G FG E+G YA K + K+K+ I+ E I++ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
P +V + +++D +Y+VME GGE+F + G + E A I+ + H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLH 158
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-VLRR 258
+++RDLKPEN L + ++ DFG + K + + G+P Y+APE +L +
Sbjct: 159 SLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSK 213
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F S + K+L+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLL 269
Query: 319 KNML 322
+N+L
Sbjct: 270 RNLL 273
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 123/244 (50%), Gaps = 11/244 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
LD++ K LG G FG E+G YA K + K+K+ I+ E I++ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
P +V + +++D +Y+VME GGE+F + G + E A I+ + H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-VLRR 258
+++RDLKPEN L + ++ DFG + K + + G+P Y+APE +L +
Sbjct: 159 SLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSK 213
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F S + K+L+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLL 269
Query: 319 KNML 322
+N+L
Sbjct: 270 RNLL 273
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 149/295 (50%), Gaps = 16/295 (5%)
Query: 50 SVSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETY 109
S + V + L+ VV + LD + ++G G GI +G+
Sbjct: 46 SPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFI---KIGEGSTGIVCIATVRSSGKLV 102
Query: 110 ACKKI-AKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGE 168
A KK+ +++ + E+ + EV IMR +H N+V +Y D +++VME EGG
Sbjct: 103 AVKKMDLRKQQRRELLFN----EVVIMRDY-QHENVVEMYNSYLVGDELWVVMEFLEGGA 157
Query: 169 LFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAID 228
L D IV E AAV +L+ + V H GV+HRD+K ++ L + + ++K D
Sbjct: 158 LTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL---THDGRVKLSD 213
Query: 229 FGL-SIFFKPGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAE 286
FG + K + +VG+PY+MAPE++ R YGPE+D+WS G+++ ++ G PP++ E
Sbjct: 214 FGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 273
Query: 287 TEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
A +IR + KVS K + +L +P R T E+L++P++
Sbjct: 274 PPLK-AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 327
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 123/244 (50%), Gaps = 11/244 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
LD++ K LG G FG E+G YA K + K+K+ I+ E I++ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
P +V + +++D +Y+VME GGE+F + G + E A I+ + H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-VLRR 258
+++RDLKPEN L + ++ DFG + K + + G+P Y+APE +L +
Sbjct: 159 SLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSK 213
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F S + K+L+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLL 269
Query: 319 KNML 322
+N+L
Sbjct: 270 RNLL 273
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 149/295 (50%), Gaps = 16/295 (5%)
Query: 50 SVSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETY 109
S + V + L+ VV + LD + ++G G GI +G+
Sbjct: 123 SPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFI---KIGEGSTGIVCIATVRSSGKLV 179
Query: 110 ACKKI-AKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGE 168
A KK+ +++ + E+ + EV IMR +H N+V +Y D +++VME EGG
Sbjct: 180 AVKKMDLRKQQRRELLFN----EVVIMRDY-QHENVVEMYNSYLVGDELWVVMEFLEGGA 234
Query: 169 LFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAID 228
L D IV E AAV +L+ + V H GV+HRD+K ++ L + + ++K D
Sbjct: 235 LTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL---THDGRVKLSD 290
Query: 229 FGL-SIFFKPGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAE 286
FG + K + +VG+PY+MAPE++ R YGPE+D+WS G+++ ++ G PP++ E
Sbjct: 291 FGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 350
Query: 287 TEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
A +IR + KVS K + +L +P R T E+L++P++
Sbjct: 351 PPLK-AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 404
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 123/244 (50%), Gaps = 11/244 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
LD++ K LG G FG E+G YA K + K+K+ I+ E I++ +
Sbjct: 35 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 93
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
P +V + +++D +Y+VME GGE+F + G + E A I+ + H
Sbjct: 94 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 153
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-VLRR 258
+++RDLKPEN L + ++ DFG + K + + G+P Y+APE +L +
Sbjct: 154 SLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSK 208
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F S + K+L+
Sbjct: 209 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLL 264
Query: 319 KNML 322
+N+L
Sbjct: 265 RNLL 268
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 148/295 (50%), Gaps = 16/295 (5%)
Query: 50 SVSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETY 109
S + V + L+ VV + LD + ++G G GI +G+
Sbjct: 1 SPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFI---KIGEGSTGIVCIATVRSSGKLV 57
Query: 110 ACKKI-AKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGE 168
A KK+ +++ + E+ + EV IMR +H N+V +Y D +++VME EGG
Sbjct: 58 AVKKMDLRKQQRRELLFN----EVVIMRDY-QHENVVEMYNSYLVGDELWVVMEFLEGGA 112
Query: 169 LFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAID 228
L D IV E AAV +L+ + V H GV+HRD+K ++ L + + ++K D
Sbjct: 113 LTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL---THDGRVKLSD 168
Query: 229 FGLSI-FFKPGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAE 286
FG K + +VG+PY+MAPE++ R YGPE+D+WS G+++ ++ G PP++ E
Sbjct: 169 FGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 228
Query: 287 TEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
A +IR + KVS K + +L +P R T E+L++P++
Sbjct: 229 PPLK-AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 282
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 148/295 (50%), Gaps = 16/295 (5%)
Query: 50 SVSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETY 109
S + V + L+ VV + LD + ++G G GI +G+
Sbjct: 3 SPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFI---KIGEGSTGIVCIATVRSSGKLV 59
Query: 110 ACKKI-AKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGE 168
A KK+ +++ + E+ + EV IMR +H N+V +Y D +++VME EGG
Sbjct: 60 AVKKMDLRKQQRRELLFN----EVVIMRDY-QHENVVEMYNSYLVGDELWVVMEFLEGGA 114
Query: 169 LFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAID 228
L D IV E AAV +L+ + V H GV+HRD+K ++ L + + ++K D
Sbjct: 115 LTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL---THDGRVKLSD 170
Query: 229 FGLSI-FFKPGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAE 286
FG K + +VG+PY+MAPE++ R YGPE+D+WS G+++ ++ G PP++ E
Sbjct: 171 FGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 230
Query: 287 TEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
A +IR + KVS K + +L +P R T E+L++P++
Sbjct: 231 PPLK-AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 284
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 125/252 (49%), Gaps = 11/252 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
LD++ K LG G FG E+G YA K + K+K+ I+ E I++ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
P +V + +++D +Y+VME GGE+F + G + E A I+ + H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-VLRR 258
+++RDLKPEN L + ++ DFG + K + + G+P Y+APE +L +
Sbjct: 159 SLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSK 213
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F S + K+L+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLL 269
Query: 319 KNMLDPNPYNRL 330
+N+L + R
Sbjct: 270 RNLLQVDLTKRF 281
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 136/257 (52%), Gaps = 13/257 (5%)
Query: 88 ELGRGEFGITHQCFEIETGETYACKKI-AKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
++G G GI +G+ A KK+ +++ + E+ + EV IMR +H N+V
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN----EVVIMRDY-QHENVVE 85
Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
+Y D +++VME EGG L D IV E AAV +L+ + V H GV+HR
Sbjct: 86 MYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 144
Query: 207 DLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSPYYMAPEVLRR-NYGPEI 264
D+K ++ L + + ++K DFG K + +VG+PY+MAPE++ R YGPE+
Sbjct: 145 DIKSDSILL---THDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 201
Query: 265 DVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDP 324
D+WS G+++ ++ G PP++ E A +IR + KVS K + +L
Sbjct: 202 DIWSLGIMVIEMVDGEPPYFNEPPLK-AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVR 260
Query: 325 NPYNRLTLEEVLENPWI 341
+P R T E+L++P++
Sbjct: 261 DPAQRATAAELLKHPFL 277
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 125/259 (48%), Gaps = 12/259 (4%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
+ + FGK LG G F E+ T YA K + K + E + V RE ++M L
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 90
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
HP V ++D + +Y + + G L I G + E I+ ++ H
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
G++HRDLKPEN L +E+ ++ DFG + P + VG+ Y++PE+L
Sbjct: 151 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 207
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
++ D+W+ G IIY L+ G+PPF A E I II+ + DF +PK A++
Sbjct: 208 EKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARD 263
Query: 317 LVKNMLDPNPYNRLTLEEV 335
LV+ +L + RL EE+
Sbjct: 264 LVEKLLVLDATKRLGCEEM 282
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 136/257 (52%), Gaps = 13/257 (5%)
Query: 88 ELGRGEFGITHQCFEIETGETYACKKI-AKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
++G G GI +G+ A KK+ +++ + E+ + EV IMR +H N+V
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN----EVVIMRDY-QHENVVE 81
Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
+Y D +++VME EGG L D IV E AAV +L+ + V H GV+HR
Sbjct: 82 MYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 140
Query: 207 DLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSPYYMAPEVLRR-NYGPEI 264
D+K ++ L + + ++K DFG K + +VG+PY+MAPE++ R YGPE+
Sbjct: 141 DIKSDSILL---THDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 197
Query: 265 DVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDP 324
D+WS G+++ ++ G PP++ E A +IR + KVS K + +L
Sbjct: 198 DIWSLGIMVIEMVDGEPPYFNEPPLK-AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVR 256
Query: 325 NPYNRLTLEEVLENPWI 341
+P R T E+L++P++
Sbjct: 257 DPAQRATAAELLKHPFL 273
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 126/252 (50%), Gaps = 11/252 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
LD++ K LG G FG E+G YA K + K+K+ I+ E I++ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
P +V + +++D +Y+VME GGE+F + G ++E A I+ + H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-VLRR 258
+++RDLKPEN + + ++ DFG + K + + G+P Y+APE ++ +
Sbjct: 159 SLDLIYRDLKPENLII---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIIISK 213
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F S + K+L+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLL 269
Query: 319 KNMLDPNPYNRL 330
+N+L + R
Sbjct: 270 RNLLQVDLTKRF 281
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 134/275 (48%), Gaps = 22/275 (8%)
Query: 75 AEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD-----VR 129
EG KY+ LG G FG + E + K I KEK+ + I+D V
Sbjct: 18 CEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVT 77
Query: 130 REVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGG-ELFDRIVNKGHYTERAAAAVG 188
E+ I+ + +H NI+ + +E++ LVME G +LF I E A+ +
Sbjct: 78 LEIAILSRV-EHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIF 136
Query: 189 KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP 248
+ ++ V ++HRD+K EN + A E+ +K IDFG + + + G+ F G+
Sbjct: 137 RQLVSAVGYLRLKDIIHRDIKDENIVIA---EDFTIKLIDFGSAAYLERGKLFYTFCGTI 193
Query: 249 YYMAPEVLRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDP 306
Y APEVL N GPE+++WS GV +Y L+ PF E EE + AI P
Sbjct: 194 EYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF-CELEETVEAAI---------HP 243
Query: 307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
VSKE LV +L P P R TLE+++ +PW+
Sbjct: 244 PYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWV 278
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 123/244 (50%), Gaps = 11/244 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
LD++ K LG G FG E+G YA K + K+K+ I+ E I++ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
P +V + +++D +Y+VME GGE+F + G ++E A I+ + H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-VLRR 258
+++RDLKPEN L + ++ DFG + K + + G+P Y+AP +L +
Sbjct: 159 SLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPAIILSK 213
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F S + K+L+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLL 269
Query: 319 KNML 322
+N+L
Sbjct: 270 RNLL 273
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 145/288 (50%), Gaps = 13/288 (4%)
Query: 64 SFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEI 123
S L+ + + + +Y G+ LG+G F ++ +++T E +A K + K L
Sbjct: 9 SAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPH 68
Query: 124 DIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERA 183
+ + E+ I + L +P++V + +ED D +Y+V+E+C L + + TE
Sbjct: 69 QKEKMSTEIAIHKSL-DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPE 127
Query: 184 AAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS--IFFKPGEQF 241
A + ++ V+ H N V+HRDLK N D + +K DFGL+ I F GE+
Sbjct: 128 ARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLND---DMDVKIGDFGLATKIEFD-GERK 183
Query: 242 CEIVGSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKI 300
++ G+P Y+APEVL ++ + E+D+WS G I+Y LL G PPF + I + +
Sbjct: 184 KDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY 243
Query: 301 DFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAP 348
R ++ A L++ ML +P R ++ E+L + + +AP
Sbjct: 244 SVPR----HINPVASALIRRMLHADPTLRPSVAELLTDEFF-TSGYAP 286
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 125/252 (49%), Gaps = 11/252 (4%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
LD++ K LG G FG E+G YA K + K+K+ I+ E I++ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
P +V + +++D +Y+VME GGE+F + G ++E A I+ + H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-VLRR 258
+++RDLKPEN L + ++ DFG + K + + G+P +APE +L +
Sbjct: 159 SLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEALAPEIILSK 213
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
Y +D W+ GV+IY + G PPF+A+ I I+ GK+ F S + K+L+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLL 269
Query: 319 KNMLDPNPYNRL 330
+N+L + R
Sbjct: 270 RNLLQVDLTKRF 281
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/258 (32%), Positives = 133/258 (51%), Gaps = 13/258 (5%)
Query: 88 ELGRGEFGITHQCFEIETGETYACKKI-AKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
++G G GI E TG+ A KK+ +++ + E+ + EV IMR H N+V
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFN----EVVIMRDY-HHDNVVD 106
Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
+Y D +++VME EGG L D IV E A V ++LR + H GV+HR
Sbjct: 107 MYSSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHR 165
Query: 207 DLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSPYYMAPEVLRR-NYGPEI 264
D+K ++ L + + ++K DFG K + +VG+PY+MAPEV+ R YG E+
Sbjct: 166 DIKSDSILL---TSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEV 222
Query: 265 DVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDP 324
D+WS G+++ ++ G PP++ E A IR + KVS + + ML
Sbjct: 223 DIWSLGIMVIEMIDGEPPYFNEPPLQ-AMRRIRDSLPPRVKDLHKVSSVLRGFLDLMLVR 281
Query: 325 NPYNRLTLEEVLENPWIK 342
P R T +E+L +P++K
Sbjct: 282 EPSQRATAQELLGHPFLK 299
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 148/298 (49%), Gaps = 41/298 (13%)
Query: 79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVR-REVEIM 135
+++KY ++G G +G+ +C +TG+ A KK L++E D I + RE+ ++
Sbjct: 1 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKF----LESEDDPVIKKIALREIRML 56
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV 195
+ L KHPN+V E + K ++LV E C+ L + + E ++ L+ V
Sbjct: 57 KQL-KHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAV 115
Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPE 254
CH++ +HRD+KPEN L +++S +K DFG + + P + + + V + +Y +PE
Sbjct: 116 NFCHKHNCIHRDVKPENILI---TKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPE 172
Query: 255 VL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE--------EGIAHAIIRGKIDFER 304
+L YGP +DVW+ G + LL GVP + +++ + + I R + F
Sbjct: 173 LLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFST 232
Query: 305 ----------DP---------WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
DP +P +S A L+K L +P RLT E++L +P+ +N
Sbjct: 233 NQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFEN 290
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 146/286 (51%), Gaps = 27/286 (9%)
Query: 62 SISFQLRSV-VSNPAEGNILDKYTFGKELGRGEFGITHQCFEI---ETGETYACKKIAK- 116
++ +LR+ ++ AE ++ + K LG G +G +I +TG+ YA K + K
Sbjct: 34 TVKHELRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKA 93
Query: 117 ---EKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI 173
+K KT + R E +++ H+ + P +VT A++ + ++L+++ GGELF +
Sbjct: 94 TIVQKAKT---TEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL 150
Query: 174 VNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI 233
+ +TE I+ ++ H+ G+++RD+K EN L N + DFGLS
Sbjct: 151 SQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSK 207
Query: 234 FFKPGEQ-----FCEIVGSPYYMAPEVLR---RNYGPEIDVWSAGVIIYILLCGVPPFWA 285
F E FC G+ YMAP+++R + +D WS GV++Y LL G PF
Sbjct: 208 EFVADETERAYDFC---GTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTV 264
Query: 286 ETEEGIAHAIIRGKIDFERDPWPK-VSKEAKELVKNMLDPNPYNRL 330
+ E+ + A I +I P+P+ +S AK+L++ +L +P RL
Sbjct: 265 DGEKN-SQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRL 309
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 134/268 (50%), Gaps = 19/268 (7%)
Query: 89 LGRGEFGITHQCFEI---ETGETYACKKIAKEKL-KTEIDIDDVRREVEIMRHLPKHPNI 144
LG+G +G Q ++ TG+ +A K + K + + D + E I+ + KHP I
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV-KHPFI 83
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVM 204
V A++ +YL++E GGELF ++ +G + E A I + H+ G++
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGII 143
Query: 205 HRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSPYYMAPEVLRRN-YGP 262
+RDLKPEN + + +K DFGL G G+ YMAPE+L R+ +
Sbjct: 144 YRDLKPENIML---NHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGHNR 200
Query: 263 EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNML 322
+D WS G ++Y +L G PPF E + I++ K++ P +++EA++L+K +L
Sbjct: 201 AVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP----PYLTQEARDLLKKLL 256
Query: 323 DPNPYNRLT-----LEEVLENPWIKNDN 345
N +RL EV +P+ ++ N
Sbjct: 257 KRNAASRLGAGPGDAGEVQAHPFFRHIN 284
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 134/268 (50%), Gaps = 19/268 (7%)
Query: 89 LGRGEFGITHQCFEI---ETGETYACKKIAKEKL-KTEIDIDDVRREVEIMRHLPKHPNI 144
LG+G +G Q ++ TG+ +A K + K + + D + E I+ + KHP I
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV-KHPFI 83
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVM 204
V A++ +YL++E GGELF ++ +G + E A I + H+ G++
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGII 143
Query: 205 HRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSPYYMAPEVLRRN-YGP 262
+RDLKPEN + + +K DFGL G G+ YMAPE+L R+ +
Sbjct: 144 YRDLKPENIML---NHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNR 200
Query: 263 EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNML 322
+D WS G ++Y +L G PPF E + I++ K++ P +++EA++L+K +L
Sbjct: 201 AVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP----PYLTQEARDLLKKLL 256
Query: 323 DPNPYNRLT-----LEEVLENPWIKNDN 345
N +RL EV +P+ ++ N
Sbjct: 257 KRNAASRLGAGPGDAGEVQAHPFFRHIN 284
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
+Y G LG G FG + + A K + K+++ ++ + R EV +++ +
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
++ + +E D+ L++E E +LFD I +G E A + +L V+
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
CH GV+HRD+K EN L +LK IDFG K + + G+ Y PE +
Sbjct: 157 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 213
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
R R +G VWS G+++Y ++CG PF + E IIRG++ F + +VS E
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSEC 263
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
+ L++ L P +R T EE+ +PW+++
Sbjct: 264 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
+Y G LG G FG + + A K + K+++ ++ + R EV +++ +
Sbjct: 52 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
++ + +E D+ L++E E +LFD I +G E A + +L V+
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 171
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
CH GV+HRD+K EN L +LK IDFG K + + G+ Y PE +
Sbjct: 172 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 228
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
R R +G VWS G+++Y ++CG PF + E IIRG++ F + +VS E
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSEC 278
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
+ L++ L P +R T EE+ +PW+++
Sbjct: 279 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 148/284 (52%), Gaps = 28/284 (9%)
Query: 67 LRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKI-AKEKLKTEIDI 125
LR VV +LD Y ++G G GI E +G A K + +++ + E+
Sbjct: 34 LRMVVDQGDPRLLLDSYV---KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLF 90
Query: 126 DDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAA 185
+ EV IMR +H N+V ++Y + ++++ME +GG L D IV++ E A
Sbjct: 91 N----EVVIMRDY-QHFNVVEMYKSYLVGEELWVLMEFLQGGALTD-IVSQVRLNEEQIA 144
Query: 186 AVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEI 244
V + +L+ + H GV+HRD+K ++ L + + ++K DFG K + +
Sbjct: 145 TVCEAVLQALAYLHAQGVIHRDIKSDSILL---TLDGRVKLSDFGFCAQISKDVPKRKXL 201
Query: 245 VGSPYYMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFE 303
VG+PY+MAPEV+ R+ Y E+D+WS G+++ ++ G PP+++++ ++
Sbjct: 202 VGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP-------VQAMKRLR 254
Query: 304 RDPWP------KVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
P P KVS ++ ++ ML +P R T +E+L++P++
Sbjct: 255 DSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFL 298
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
+Y G LG G FG + + A K + K+++ ++ + R EV +++ +
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
++ + +E D+ L++E E +LFD I +G E A + +L V+
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVR 128
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
CH GV+HRD+K EN L +LK IDFG K + + G+ Y PE +
Sbjct: 129 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 185
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
R R +G VWS G+++Y ++CG PF + E IIRG++ F + +VS E
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSEC 235
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
+ L++ L P +R T EE+ +PW+++
Sbjct: 236 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 264
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
+Y G LG G FG + + A K + K+++ ++ + R EV +++ +
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
++ + +E D+ L++E E +LFD I +G E A + +L V+
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 129
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
CH GV+HRD+K EN L +LK IDFG K + + G+ Y PE +
Sbjct: 130 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 186
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
R R +G VWS G+++Y ++CG PF + E IIRG++ F + +VS E
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSEC 236
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
+ L++ L P +R T EE+ +PW+++
Sbjct: 237 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
+Y G LG G FG + + A K + K+++ ++ + R EV +++ +
Sbjct: 57 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 116
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
++ + +E D+ L++E E +LFD I +G E A + +L V+
Sbjct: 117 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 176
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
CH GV+HRD+K EN L +LK IDFG K + + G+ Y PE +
Sbjct: 177 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 233
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
R R +G VWS G+++Y ++CG PF + E IIRG++ F + +VS E
Sbjct: 234 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXEC 283
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
+ L++ L P +R T EE+ +PW+++
Sbjct: 284 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 312
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
+Y G LG G FG + + A K + K+++ ++ + R EV +++ +
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
++ + +E D+ L++E E +LFD I +G E A + +L V+
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 129
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
CH GV+HRD+K EN L +LK IDFG K + + G+ Y PE +
Sbjct: 130 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 186
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
R R +G VWS G+++Y ++CG PF + E IIRG++ F + +VS E
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSEC 236
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
+ L++ L P +R T EE+ +PW+++
Sbjct: 237 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
+Y G LG G FG + + A K + K+++ ++ + R EV +++ +
Sbjct: 52 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
++ + +E D+ L++E E +LFD I +G E A + +L V+
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 171
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
CH GV+HRD+K EN L +LK IDFG K + + G+ Y PE +
Sbjct: 172 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 228
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
R R +G VWS G+++Y ++CG PF + E IIRG++ F + +VS E
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXEC 278
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
+ L++ L P +R T EE+ +PW+++
Sbjct: 279 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
+Y G LG G FG + + A K + K+++ ++ + R EV +++ +
Sbjct: 24 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
++ + +E D+ L++E E +LFD I +G E A + +L V+
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 143
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
CH GV+HRD+K EN L +LK IDFG K + + G+ Y PE +
Sbjct: 144 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 200
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
R R +G VWS G+++Y ++CG PF + E IIRG++ F + +VS E
Sbjct: 201 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSEC 250
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
+ L++ L P +R T EE+ +PW+++
Sbjct: 251 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 279
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
+Y G LG G FG + + A K + K+++ ++ + R EV +++ +
Sbjct: 44 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 103
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
++ + +E D+ L++E E +LFD I +G E A + +L V+
Sbjct: 104 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 163
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
CH GV+HRD+K EN L +LK IDFG K + + G+ Y PE +
Sbjct: 164 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 220
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
R R +G VWS G+++Y ++CG PF + E IIRG++ F + +VS E
Sbjct: 221 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSEC 270
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
+ L++ L P +R T EE+ +PW+++
Sbjct: 271 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 299
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
+Y G LG G FG + + A K + K+++ ++ + R EV +++ +
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
++ + +E D+ L++E E +LFD I +G E A + +L V+
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 129
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
CH GV+HRD+K EN L +LK IDFG K + + G+ Y PE +
Sbjct: 130 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 186
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
R R +G VWS G+++Y ++CG PF + E IIRG++ F + +VS E
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSEC 236
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
+ L++ L P +R T EE+ +PW+++
Sbjct: 237 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
+Y G LG G FG + + A K + K+++ ++ + R EV +++ +
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
++ + +E D+ L++E E +LFD I +G E A + +L V+
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 144
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
CH GV+HRD+K EN L +LK IDFG K + + G+ Y PE +
Sbjct: 145 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 201
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
R R +G VWS G+++Y ++CG PF + E IIRG++ F + +VS E
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSEC 251
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
+ L++ L P +R T EE+ +PW+++
Sbjct: 252 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 280
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
+Y G LG G FG + + A K + K+++ ++ + R EV +++ +
Sbjct: 24 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
++ + +E D+ L++E E +LFD I +G E A + +L V+
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 143
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
CH GV+HRD+K EN L +LK IDFG K + + G+ Y PE +
Sbjct: 144 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 200
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
R R +G VWS G+++Y ++CG PF + E IIRG++ F + +VS E
Sbjct: 201 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXEC 250
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
+ L++ L P +R T EE+ +PW+++
Sbjct: 251 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 279
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
+Y G LG G FG + + A K + K+++ ++ + R EV +++ +
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
++ + +E D+ L++E E +LFD I +G E A + +L V+
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 144
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
CH GV+HRD+K EN L +LK IDFG K + + G+ Y PE +
Sbjct: 145 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 201
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
R R +G VWS G+++Y ++CG PF + E IIRG++ F + +VS E
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXEC 251
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
+ L++ L P +R T EE+ +PW+++
Sbjct: 252 QHLIRWCLALRPXDRPTFEEIQNHPWMQD 280
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 126/272 (46%), Gaps = 22/272 (8%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKE---KLKTEIDIDDVRREVEIMR 136
L + + LG G FG H G YA K + KE +LK +D R +M
Sbjct: 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDER----LML 60
Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
+ HP I+ ++D I+++M+ EGGELF + + A + ++
Sbjct: 61 SIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALE 120
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
H +++RDLKPEN L +N +K DFG + + P + + G+P Y+APEV+
Sbjct: 121 YLHSKDIIYRDLKPENILL---DKNGHIKITDFGFAKYV-PDVTY-XLCGTPDYIAPEVV 175
Query: 257 R-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK 315
+ Y ID WS G++IY +L G PF+ I+ ++ F P +++ K
Sbjct: 176 STKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP----PFFNEDVK 231
Query: 316 ELVKNMLDPNPYNRL-----TLEEVLENPWIK 342
+L+ ++ + RL E+V +PW K
Sbjct: 232 DLLSRLITRDLSQRLGNLQNGTEDVKNHPWFK 263
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
+Y G LG G FG + + A K + K+++ ++ + R EV +++ +
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
++ + +E D+ L++E E +LFD I +G E A + +L V+
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 144
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
CH GV+HRD+K EN L +LK IDFG K + + G+ Y PE +
Sbjct: 145 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 201
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
R R +G VWS G+++Y ++CG PF + E IIRG++ F + +VS E
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXEC 251
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
+ L++ L P +R T EE+ +PW+++
Sbjct: 252 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 280
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
+Y G LG G FG + + A K + K+++ ++ + R EV +++ +
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
++ + +E D+ L++E E +LFD I +G E A + +L V+
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 128
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
CH GV+HRD+K EN L +LK IDFG K + + G+ Y PE +
Sbjct: 129 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 185
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
R R +G VWS G+++Y ++CG PF + E IIRG++ F + +VS E
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSEC 235
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
+ L++ L P +R T EE+ +PW+++
Sbjct: 236 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 264
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
+Y G LG G FG + + A K + K+++ ++ + R EV +++ +
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
++ + +E D+ L++E E +LFD I +G E A + +L V+
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
CH GV+HRD+K EN L +LK IDFG K + + G+ Y PE +
Sbjct: 125 HCHNXGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 181
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
R R +G VWS G+++Y ++CG PF + E IIRG++ F + +VS E
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXEC 231
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
+ L++ L P +R T EE+ +PW+++
Sbjct: 232 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
+Y G LG G FG + + A K + K+++ ++ + R EV +++ +
Sbjct: 8 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 67
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
++ + +E D+ L++E E +LFD I +G E A + +L V+
Sbjct: 68 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 127
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
CH GV+HRD+K EN L +LK IDFG K + + G+ Y PE +
Sbjct: 128 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 184
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
R R +G VWS G+++Y ++CG PF + E IIRG++ F + +VS E
Sbjct: 185 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSEC 234
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
+ L++ L P +R T EE+ +PW+++
Sbjct: 235 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 263
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 130/255 (50%), Gaps = 16/255 (6%)
Query: 89 LGRGEFGITHQCFEI---ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIV 145
LG+G F +CFEI +T E +A K + K L + + E+ I R L H ++V
Sbjct: 29 LGKGGFA---KCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVV 84
Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMH 205
+ +ED D +++V+ELC L + + TE A + I+ + H N V+H
Sbjct: 85 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 144
Query: 206 RDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEIVGSPYYMAPEVL-RRNYGPE 263
RDLK N +E+ ++K DFGL+ + GE+ + G+P Y+APEVL ++ + E
Sbjct: 145 RDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE 201
Query: 264 IDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLD 323
+DVWS G I+Y LL G PPF + I + + + ++ A L++ ML
Sbjct: 202 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQ 257
Query: 324 PNPYNRLTLEEVLEN 338
+P R T+ E+L +
Sbjct: 258 TDPTARPTINELLND 272
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 130/255 (50%), Gaps = 16/255 (6%)
Query: 89 LGRGEFGITHQCFEI---ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIV 145
LG+G F +CFEI +T E +A K + K L + + E+ I R L H ++V
Sbjct: 25 LGKGGFA---KCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVV 80
Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMH 205
+ +ED D +++V+ELC L + + TE A + I+ + H N V+H
Sbjct: 81 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 140
Query: 206 RDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEIVGSPYYMAPEVL-RRNYGPE 263
RDLK N +E+ ++K DFGL+ + GE+ + G+P Y+APEVL ++ + E
Sbjct: 141 RDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE 197
Query: 264 IDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLD 323
+DVWS G I+Y LL G PPF + I + + + ++ A L++ ML
Sbjct: 198 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQ 253
Query: 324 PNPYNRLTLEEVLEN 338
+P R T+ E+L +
Sbjct: 254 TDPTARPTINELLND 268
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 130/255 (50%), Gaps = 16/255 (6%)
Query: 89 LGRGEFGITHQCFEI---ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIV 145
LG+G F +CFEI +T E +A K + K L + + E+ I R L H ++V
Sbjct: 25 LGKGGFA---KCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVV 80
Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMH 205
+ +ED D +++V+ELC L + + TE A + I+ + H N V+H
Sbjct: 81 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 140
Query: 206 RDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEIVGSPYYMAPEVL-RRNYGPE 263
RDLK N +E+ ++K DFGL+ + GE+ + G+P Y+APEVL ++ + E
Sbjct: 141 RDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE 197
Query: 264 IDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLD 323
+DVWS G I+Y LL G PPF + I + + + ++ A L++ ML
Sbjct: 198 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQ 253
Query: 324 PNPYNRLTLEEVLEN 338
+P R T+ E+L +
Sbjct: 254 TDPTARPTINELLND 268
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
+Y G LG G FG + + A K + K+++ ++ + R EV +++ +
Sbjct: 32 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 91
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
++ + +E D+ L++E E +LFD I +G E A + +L V+
Sbjct: 92 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 151
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
CH GV+HRD+K EN L +LK IDFG K + + G+ Y PE +
Sbjct: 152 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 208
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
R R +G VWS G+++Y ++CG PF + E IIRG++ F + +VS E
Sbjct: 209 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXEC 258
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
+ L++ L P +R T EE+ +PW+++
Sbjct: 259 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 287
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
+Y G LG G FG + + A K + K+++ ++ + R EV +++ +
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
++ + +E D+ L++E E +LFD I +G E A + +L V+
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
CH GV+HRD+K EN L +LK IDFG K + + G+ Y PE +
Sbjct: 125 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 181
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
R R +G VWS G+++Y ++CG PF + E IIRG++ F + +VS E
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSEC 231
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
+ L++ L P +R T EE+ +PW+++
Sbjct: 232 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 130/255 (50%), Gaps = 16/255 (6%)
Query: 89 LGRGEFGITHQCFEI---ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIV 145
LG+G F +CFEI +T E +A K + K L + + E+ I R L H ++V
Sbjct: 47 LGKGGFA---KCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVV 102
Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMH 205
+ +ED D +++V+ELC L + + TE A + I+ + H N V+H
Sbjct: 103 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 162
Query: 206 RDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEIVGSPYYMAPEVL-RRNYGPE 263
RDLK N +E+ ++K DFGL+ + GE+ + G+P Y+APEVL ++ + E
Sbjct: 163 RDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 219
Query: 264 IDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLD 323
+DVWS G I+Y LL G PPF + I + + + ++ A L++ ML
Sbjct: 220 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQ 275
Query: 324 PNPYNRLTLEEVLEN 338
+P R T+ E+L +
Sbjct: 276 TDPTARPTINELLND 290
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 130/255 (50%), Gaps = 16/255 (6%)
Query: 89 LGRGEFGITHQCFEI---ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIV 145
LG+G F +CFEI +T E +A K + K L + + E+ I R L H ++V
Sbjct: 49 LGKGGFA---KCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVV 104
Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMH 205
+ +ED D +++V+ELC L + + TE A + I+ + H N V+H
Sbjct: 105 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 164
Query: 206 RDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEIVGSPYYMAPEVL-RRNYGPE 263
RDLK N +E+ ++K DFGL+ + GE+ + G+P Y+APEVL ++ + E
Sbjct: 165 RDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 221
Query: 264 IDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLD 323
+DVWS G I+Y LL G PPF + I + + + ++ A L++ ML
Sbjct: 222 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQ 277
Query: 324 PNPYNRLTLEEVLEN 338
+P R T+ E+L +
Sbjct: 278 TDPTARPTINELLND 292
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 138/285 (48%), Gaps = 18/285 (6%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
++ + + LG G +G T E A K + +K +D +++++E+ I + L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 62
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
H N+V + + + YL +E C GGELFDRI E A ++ V
Sbjct: 63 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
H G+ HRD+KPEN L E LK DFGL+ F+ + ++ G+ Y+APE+
Sbjct: 122 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
L+R + +DVWS G+++ +L G P+ ++ ++ + K + +PW K+
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSA 237
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW----IKNDNHAPNVSLGG 354
L+ +L NP R+T+ ++ ++ W +K P V+ GG
Sbjct: 238 PLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSGG 282
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 138/285 (48%), Gaps = 18/285 (6%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
++ + + LG G +G T E A K + +K +D +++++E+ I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 61
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
H N+V + + + YL +E C GGELFDRI E A ++ V
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
H G+ HRD+KPEN L E LK DFGL+ F+ + ++ G+ Y+APE+
Sbjct: 121 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
L+R + +DVWS G+++ +L G P+ ++ ++ + K + +PW K+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSA 236
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW----IKNDNHAPNVSLGG 354
L+ +L NP R+T+ ++ ++ W +K P V+ GG
Sbjct: 237 PLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSGG 281
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 130/255 (50%), Gaps = 16/255 (6%)
Query: 89 LGRGEFGITHQCFEI---ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIV 145
LG+G F +CFEI +T E +A K + K L + + E+ I R L H ++V
Sbjct: 23 LGKGGFA---KCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVV 78
Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMH 205
+ +ED D +++V+ELC L + + TE A + I+ + H N V+H
Sbjct: 79 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 138
Query: 206 RDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEIVGSPYYMAPEVL-RRNYGPE 263
RDLK N +E+ ++K DFGL+ + GE+ + G+P Y+APEVL ++ + E
Sbjct: 139 RDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 195
Query: 264 IDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLD 323
+DVWS G I+Y LL G PPF + I + + + ++ A L++ ML
Sbjct: 196 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQ 251
Query: 324 PNPYNRLTLEEVLEN 338
+P R T+ E+L +
Sbjct: 252 TDPTARPTINELLND 266
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 80/116 (68%)
Query: 361 KQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKV 420
KQFS NKFKK LRV+A++L ++++A +K+ F +D DK+G +TFEELK GL +G +
Sbjct: 1 KQFSAXNKFKKXALRVIAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANL 60
Query: 421 SDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
+ ++ L +AADVD +G + EF+ ++HL +I +D L AF +FDK+ SG+I
Sbjct: 61 KESEILDLXQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYI 116
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 124/265 (46%), Gaps = 9/265 (3%)
Query: 68 RSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD 127
R SN + L + F LG+G FG T E YA K + K+ + + D++
Sbjct: 6 RKQPSNNLDRVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVEC 65
Query: 128 VRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAV 187
E ++ L K P + ++ D +Y VME GG+L I G + E A
Sbjct: 66 TMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFY 125
Query: 188 GKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEIVG 246
I + H+ G+++RDLK +N + +K DFG+ G E G
Sbjct: 126 AAEISIGLFFLHKRGIIYRDLKLDNVML---DSEGHIKIADFGMCKEHMMDGVTTREFCG 182
Query: 247 SPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERD 305
+P Y+APE++ + YG +D W+ GV++Y +L G PPF E E+ + +I+ + + +
Sbjct: 183 TPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK- 241
Query: 306 PWPKVSKEAKELVKNMLDPNPYNRL 330
+SKEA + K ++ +P RL
Sbjct: 242 ---SLSKEAVSICKGLMTKHPAKRL 263
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 138/285 (48%), Gaps = 18/285 (6%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
++ + + LG G +G T E A K + +K +D +++++E+ I + L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 62
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
H N+V + + + YL +E C GGELFDRI E A ++ V
Sbjct: 63 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
H G+ HRD+KPEN L E LK DFGL+ F+ + ++ G+ Y+APE+
Sbjct: 122 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
L+R + +DVWS G+++ +L G P+ ++ ++ + K + +PW K+
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSA 237
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW----IKNDNHAPNVSLGG 354
L+ +L NP R+T+ ++ ++ W +K P V+ GG
Sbjct: 238 PLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSGG 282
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 138/285 (48%), Gaps = 18/285 (6%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
++ + + LG G +G T E A K + +K +D +++++E+ I + L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 62
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
H N+V + + + YL +E C GGELFDRI E A ++ V
Sbjct: 63 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
H G+ HRD+KPEN L E LK DFGL+ F+ + ++ G+ Y+APE+
Sbjct: 122 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
L+R + +DVWS G+++ +L G P+ ++ ++ + K + +PW K+
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSA 237
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW----IKNDNHAPNVSLGG 354
L+ +L NP R+T+ ++ ++ W +K P V+ GG
Sbjct: 238 PLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSGG 282
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 138/285 (48%), Gaps = 18/285 (6%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
++ + + LG G +G T E A K + +K +D +++++E+ I + L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 62
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
H N+V + + + YL +E C GGELFDRI E A ++ V
Sbjct: 63 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
H G+ HRD+KPEN L E LK DFGL+ F+ + ++ G+ Y+APE+
Sbjct: 122 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
L+R + +DVWS G+++ +L G P+ ++ ++ + K + +PW K+
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSA 237
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW----IKNDNHAPNVSLGG 354
L+ +L NP R+T+ ++ ++ W +K P V+ GG
Sbjct: 238 PLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSGG 282
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 131/269 (48%), Gaps = 20/269 (7%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
+Y G LG G FG + + A K + K+++ ++ + R EV +++ +
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
++ + +E D+ L++E E +LFD I +G E A + +L V+
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
CH GV+HRD+K EN L +LK IDFG K + + G+ Y PE +
Sbjct: 158 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 214
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
R R +G VWS G+++Y ++CG PF + E II G++ F + +VS E
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSSEC 264
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
+ L++ L P +R T EE+ +PW+++
Sbjct: 265 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 131/269 (48%), Gaps = 20/269 (7%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
+Y G LG G FG + + A K + K+++ ++ + R EV +++ +
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
++ + +E D+ L++E E +LFD I +G E A + +L V+
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
CH GV+HRD+K EN L +LK IDFG K + + G+ Y PE +
Sbjct: 158 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 214
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
R R +G VWS G+++Y ++CG PF + E II G++ F + +VS E
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSSEC 264
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
+ L++ L P +R T EE+ +PW+++
Sbjct: 265 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 131/269 (48%), Gaps = 20/269 (7%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
+Y G LG G FG + + A K + K+++ ++ + R EV +++ +
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
++ + +E D+ L++E E +LFD I +G E A + +L V+
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
CH GV+HRD+K EN L +LK IDFG K + + G+ Y PE +
Sbjct: 157 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 213
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
R R +G VWS G+++Y ++CG PF + E II G++ F + +VS E
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSSEC 263
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
+ L++ L P +R T EE+ +PW+++
Sbjct: 264 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 131/269 (48%), Gaps = 20/269 (7%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
+Y G LG G FG + + A K + K+++ ++ + R EV +++ +
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
++ + +E D+ L++E E +LFD I +G E A + +L V+
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
CH GV+HRD+K EN L +LK IDFG K + + G+ Y PE +
Sbjct: 157 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 213
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
R R +G VWS G+++Y ++CG PF + E II G++ F + +VS E
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSSEC 263
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
+ L++ L P +R T EE+ +PW+++
Sbjct: 264 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 131/269 (48%), Gaps = 20/269 (7%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
+Y G LG G FG + + A K + K+++ ++ + R EV +++ +
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
++ + +E D+ L++E E +LFD I +G E A + +L V+
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
CH GV+HRD+K EN L +LK IDFG K + + G+ Y PE +
Sbjct: 158 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 214
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
R R +G VWS G+++Y ++CG PF + E II G++ F + +VS E
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSXEC 264
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
+ L++ L P +R T EE+ +PW+++
Sbjct: 265 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 131/276 (47%), Gaps = 18/276 (6%)
Query: 83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
Y K +GRG FG T + YA K ++K ++ D E +IM P
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM-AFANSP 134
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
+V A++D +Y+VME GG+L + + N E+ A ++ + H G
Sbjct: 135 WVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMG 193
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEI-VGSPYYMAPEVLRRN- 259
+HRD+KP+N L ++ LK DFG + K G C+ VG+P Y++PEVL+
Sbjct: 194 FIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 250
Query: 260 ----YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGK--IDFERDPWPKVSKE 313
YG E D WS GV +Y +L G PF+A++ G I+ K + F D +SKE
Sbjct: 251 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD--NDISKE 308
Query: 314 AKELVKNMLDPNP--YNRLTLEEVLENPWIKNDNHA 347
AK L+ L R +EE+ + + KND A
Sbjct: 309 AKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWA 344
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 131/269 (48%), Gaps = 20/269 (7%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
+Y G LG G FG + + A K + K+++ ++ + R EV +++ +
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
++ + +E D+ L++E E +LFD I +G E A + +L V+
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
CH GV+HRD+K EN L +LK IDFG K + + G+ Y PE +
Sbjct: 158 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 214
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
R R +G VWS G+++Y ++CG PF + E II G++ F + +VS E
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSXEC 264
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
+ L++ L P +R T EE+ +PW+++
Sbjct: 265 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 131/276 (47%), Gaps = 18/276 (6%)
Query: 83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
Y K +GRG FG T + YA K ++K ++ D E +IM P
Sbjct: 71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM-AFANSP 129
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
+V A++D +Y+VME GG+L + + N E+ A ++ + H G
Sbjct: 130 WVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMG 188
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEI-VGSPYYMAPEVLRRN- 259
+HRD+KP+N L ++ LK DFG + K G C+ VG+P Y++PEVL+
Sbjct: 189 FIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 245
Query: 260 ----YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGK--IDFERDPWPKVSKE 313
YG E D WS GV +Y +L G PF+A++ G I+ K + F D +SKE
Sbjct: 246 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD--NDISKE 303
Query: 314 AKELVKNMLDPNP--YNRLTLEEVLENPWIKNDNHA 347
AK L+ L R +EE+ + + KND A
Sbjct: 304 AKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWA 339
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 131/276 (47%), Gaps = 18/276 (6%)
Query: 83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
Y K +GRG FG T + YA K ++K ++ D E +IM P
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM-AFANSP 134
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
+V A++D +Y+VME GG+L + + N E+ A ++ + H G
Sbjct: 135 WVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMG 193
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEI-VGSPYYMAPEVLRRN- 259
+HRD+KP+N L ++ LK DFG + K G C+ VG+P Y++PEVL+
Sbjct: 194 FIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 250
Query: 260 ----YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGK--IDFERDPWPKVSKE 313
YG E D WS GV +Y +L G PF+A++ G I+ K + F D +SKE
Sbjct: 251 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD--NDISKE 308
Query: 314 AKELVKNMLDPNP--YNRLTLEEVLENPWIKNDNHA 347
AK L+ L R +EE+ + + KND A
Sbjct: 309 AKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWA 344
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 131/269 (48%), Gaps = 20/269 (7%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
+Y G LG G FG + + A K + K+++ ++ + R EV +++ +
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
++ + +E D+ L++E E +LFD I +G E A + +L V+
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
CH GV+HRD+K EN L +LK IDFG K + + G+ Y PE +
Sbjct: 157 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 213
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
R R +G VWS G+++Y ++CG PF + E II G++ F + +VS E
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSXEC 263
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
+ L++ L P +R T EE+ +PW+++
Sbjct: 264 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 126/254 (49%), Gaps = 24/254 (9%)
Query: 87 KELGRGEFG---ITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVE--IMRHLPKH 141
K LG+G FG + + ++G YA K + K LK D VR ++E I+ + H
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVR---DRVRTKMERDILADV-NH 89
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
P +V A++ + +YL+++ GG+LF R+ + +TE + + H
Sbjct: 90 PFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSL 149
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSI----FFKPGEQFCEIVGSPYYMAPEVL- 256
G+++RDLKPEN L E +K DFGLS K FC G+ YMAPEV+
Sbjct: 150 GIIYRDLKPENILL---DEEGHIKLTDFGLSKEAIDHEKKAYSFC---GTVEYMAPEVVN 203
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
R+ + D WS GV+++ +L G PF + + I++ K+ + +S EA+
Sbjct: 204 RQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQ----FLSTEAQS 259
Query: 317 LVKNMLDPNPYNRL 330
L++ + NP NRL
Sbjct: 260 LLRALFKRNPANRL 273
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 131/269 (48%), Gaps = 20/269 (7%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
+Y G LG G FG + + A K + K+++ ++ + R EV +++ +
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
++ + +E D+ L++E E +LFD I +G E A + +L V+
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
CH GV+HRD+K EN L +LK IDFG K + + G+ Y PE +
Sbjct: 125 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 181
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
R R +G VWS G+++Y ++CG PF + E II G++ F + +VS E
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSSEC 231
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
+ L++ L P +R T EE+ +PW+++
Sbjct: 232 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 132/269 (49%), Gaps = 30/269 (11%)
Query: 72 SNPAEGNILDKYTFGKELGRGEFGITHQCFEI---ETGETYACKKIAKEKLKTEIDIDDV 128
++P++ +L K LG+G FG +I + + YA K + K LK D V
Sbjct: 21 ADPSQFELL------KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR---DRV 71
Query: 129 RREVE--IMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
R ++E I+ + HP IV A++ + +YL+++ GG+LF R+ + +TE
Sbjct: 72 RTKMERDILVEV-NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF 130
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI----FFKPGEQFC 242
+ + H G+++RDLKPEN L E +K DFGLS K FC
Sbjct: 131 YLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAYSFC 187
Query: 243 EIVGSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID 301
G+ YMAPEV+ RR + D WS GV+++ +L G PF + + I++ K+
Sbjct: 188 ---GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG 244
Query: 302 FERDPWPKVSKEAKELVKNMLDPNPYNRL 330
+ +S EA+ L++ + NP NRL
Sbjct: 245 MPQF----LSPEAQSLLRMLFKRNPANRL 269
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 127/259 (49%), Gaps = 24/259 (9%)
Query: 82 KYTFGKELGRGEFGITHQCFEI---ETGETYACKKIAKEKLKTEIDIDDVRREVE--IMR 136
++ K LG+G FG +I + + YA K + K LK D VR ++E I+
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR---DRVRTKMERDILV 82
Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
+ HP IV A++ + +YL+++ GG+LF R+ + +TE + +
Sbjct: 83 EV-NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD 141
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI----FFKPGEQFCEIVGSPYYMA 252
H G+++RDLKPEN L E +K DFGLS K FC G+ YMA
Sbjct: 142 HLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAYSFC---GTVEYMA 195
Query: 253 PEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS 311
PEV+ RR + D WS GV+++ +L G PF + + I++ K+ + +S
Sbjct: 196 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF----LS 251
Query: 312 KEAKELVKNMLDPNPYNRL 330
EA+ L++ + NP NRL
Sbjct: 252 PEAQSLLRMLFKRNPANRL 270
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 108/219 (49%), Gaps = 22/219 (10%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
D Y + +G G + + E A K+I EK +T +D++ +E++ M
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQT--SMDELLKEIQAMSQC-H 71
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFD---RIVNKGHYT-----ERAAAAVGKTIL 192
HPNIV+Y ++ KD ++LVM+L GG + D IV KG + E A + + +L
Sbjct: 72 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE------IVG 246
++ H+NG +HRD+K N L E+ ++ DFG+S F G VG
Sbjct: 132 EGLEYLHKNGQIHRDVKAGNILLG---EDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 188
Query: 247 SPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLCGVPPF 283
+P +MAPEV+ R Y + D+WS G+ L G P+
Sbjct: 189 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY 227
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 133/273 (48%), Gaps = 18/273 (6%)
Query: 83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
Y K +GRG FG + + YA K ++K ++ D E +IM P
Sbjct: 77 YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FANSP 135
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
+V A++D +Y+VME GG+L + + N E+ A ++ + H G
Sbjct: 136 WVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSMG 194
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFF-KPGEQFCEI-VGSPYYMAPEVLRRN- 259
++HRD+KP+N L ++ LK DFG + + G C+ VG+P Y++PEVL+
Sbjct: 195 LIHRDVKPDNMLL---DKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQG 251
Query: 260 ----YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAII--RGKIDFERDPWPKVSKE 313
YG E D WS GV ++ +L G PF+A++ G I+ + + F D ++SK
Sbjct: 252 GDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPED--AEISKH 309
Query: 314 AKELVKNMLDPNP--YNRLTLEEVLENPWIKND 344
AK L+ L R +EE+ ++P+ KND
Sbjct: 310 AKNLICAFLTDREVRLGRNGVEEIKQHPFFKND 342
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 108/219 (49%), Gaps = 22/219 (10%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
D Y + +G G + + E A K+I EK +T +D++ +E++ M
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQT--SMDELLKEIQAMSQC-H 66
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFD---RIVNKGHYT-----ERAAAAVGKTIL 192
HPNIV+Y ++ KD ++LVM+L GG + D IV KG + E A + + +L
Sbjct: 67 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE------IVG 246
++ H+NG +HRD+K N L E+ ++ DFG+S F G VG
Sbjct: 127 EGLEYLHKNGQIHRDVKAGNILLG---EDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 183
Query: 247 SPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLCGVPPF 283
+P +MAPEV+ R Y + D+WS G+ L G P+
Sbjct: 184 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY 222
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 132/269 (49%), Gaps = 30/269 (11%)
Query: 72 SNPAEGNILDKYTFGKELGRGEFGITHQCFEI---ETGETYACKKIAKEKLKTEIDIDDV 128
++P++ +L K LG+G FG +I + + YA K + K LK D V
Sbjct: 21 ADPSQFELL------KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR---DRV 71
Query: 129 RREVE--IMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
R ++E I+ + HP IV A++ + +YL+++ GG+LF R+ + +TE
Sbjct: 72 RTKMERDILVEV-NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF 130
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI----FFKPGEQFC 242
+ + H G+++RDLKPEN L E +K DFGLS K FC
Sbjct: 131 YLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAYSFC 187
Query: 243 EIVGSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID 301
G+ YMAPEV+ RR + D WS GV+++ +L G PF + + I++ K+
Sbjct: 188 ---GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG 244
Query: 302 FERDPWPKVSKEAKELVKNMLDPNPYNRL 330
+ +S EA+ L++ + NP NRL
Sbjct: 245 MPQF----LSPEAQSLLRMLFKRNPANRL 269
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 131/267 (49%), Gaps = 14/267 (5%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
++ + + LG G +G T E A K + +K +D +++++E+ I + L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEIXINKML 62
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
H N+V + + + YL +E C GGELFDRI E A ++ V
Sbjct: 63 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
H G+ HRD+KPEN L E LK DFGL+ F+ + ++ G+ Y+APE+
Sbjct: 122 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 178
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
L+R + +DVWS G+++ +L G P+ ++ ++ + K + +PW K+
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSA 237
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW 340
L+ +L NP R+T+ ++ ++ W
Sbjct: 238 PLALLHKILVENPSARITIPDIKKDRW 264
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 131/267 (49%), Gaps = 14/267 (5%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
++ + + LG G +G T E A K + +K +D +++++E+ I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEIXINKML 61
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
H N+V + + + YL +E C GGELFDRI E A ++ V
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
H G+ HRD+KPEN L E LK DFGL+ F+ + ++ G+ Y+APE+
Sbjct: 121 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
L+R + +DVWS G+++ +L G P+ ++ ++ + K + +PW K+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSA 236
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW 340
L+ +L NP R+T+ ++ ++ W
Sbjct: 237 PLALLHKILVENPSARITIPDIKKDRW 263
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 131/267 (49%), Gaps = 14/267 (5%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
++ + + LG G +G T E A K + +K +D +++++E+ I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEIXINKML 61
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
H N+V + + + YL +E C GGELFDRI E A ++ V
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
H G+ HRD+KPEN L E LK DFGL+ F+ + ++ G+ Y+APE+
Sbjct: 121 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
L+R + +DVWS G+++ +L G P+ ++ ++ + K + +PW K+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSA 236
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW 340
L+ +L NP R+T+ ++ ++ W
Sbjct: 237 PLALLHKILVENPSARITIPDIKKDRW 263
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 131/267 (49%), Gaps = 14/267 (5%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
++ + + LG G +G T E A K + +K +D +++++E+ I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 61
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
H N+V + + + YL +E C GGELFDRI E A ++ V
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
H G+ HRD+KPEN L E LK DFGL+ F+ + ++ G+ Y+APE+
Sbjct: 121 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
L+R + +DVWS G+++ +L G P+ ++ ++ + K + +PW K+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSA 236
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW 340
L+ +L NP R+T+ ++ ++ W
Sbjct: 237 PLALLHKILVENPSARITIPDIKKDRW 263
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 131/267 (49%), Gaps = 14/267 (5%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
++ + + LG G +G T E A K + +K +D +++++E+ I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 61
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
H N+V + + + YL +E C GGELFDRI E A ++ V
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
H G+ HRD+KPEN L E LK DFGL+ F+ + ++ G+ Y+APE+
Sbjct: 121 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
L+R + +DVWS G+++ +L G P+ ++ ++ + K + +PW K+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTY-LNPWKKIDSA 236
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW 340
L+ +L NP R+T+ ++ ++ W
Sbjct: 237 PLALLHKILVENPSARITIPDIKKDRW 263
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 131/267 (49%), Gaps = 14/267 (5%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
++ + + LG G +G T E A K + +K +D +++++E+ I + L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 62
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
H N+V + + + YL +E C GGELFDRI E A ++ V
Sbjct: 63 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
H G+ HRD+KPEN L E LK DFGL+ F+ + ++ G+ Y+APE+
Sbjct: 122 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
L+R + +DVWS G+++ +L G P+ ++ ++ + K + +PW K+
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSA 237
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW 340
L+ +L NP R+T+ ++ ++ W
Sbjct: 238 PLALLHKILVENPSARITIPDIKKDRW 264
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 131/267 (49%), Gaps = 14/267 (5%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
++ + + LG G +G T E A K + +K +D +++++E+ I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 61
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
H N+V + + + YL +E C GGELFDRI E A ++ V
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
H G+ HRD+KPEN L E LK DFGL+ F+ + ++ G+ Y+APE+
Sbjct: 121 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
L+R + +DVWS G+++ +L G P+ ++ ++ + K + +PW K+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSA 236
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW 340
L+ +L NP R+T+ ++ ++ W
Sbjct: 237 PLALLHKILVENPSARITIPDIKKDRW 263
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 131/267 (49%), Gaps = 14/267 (5%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
++ + + LG G +G T E A K + +K +D +++++E+ I + L
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 60
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
H N+V + + + YL +E C GGELFDRI E A ++ V
Sbjct: 61 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 119
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
H G+ HRD+KPEN L E LK DFGL+ F+ + ++ G+ Y+APE+
Sbjct: 120 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 176
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
L+R + +DVWS G+++ +L G P+ ++ ++ + K + +PW K+
Sbjct: 177 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSA 235
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW 340
L+ +L NP R+T+ ++ ++ W
Sbjct: 236 PLALLHKILVENPSARITIPDIKKDRW 262
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 131/267 (49%), Gaps = 14/267 (5%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
++ + + LG G +G T E A K + +K +D +++++E+ I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 61
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
H N+V + + + YL +E C GGELFDRI E A ++ V
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
H G+ HRD+KPEN L E LK DFGL+ F+ + ++ G+ Y+APE+
Sbjct: 121 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
L+R + +DVWS G+++ +L G P+ ++ ++ + K + +PW K+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSA 236
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW 340
L+ +L NP R+T+ ++ ++ W
Sbjct: 237 PLALLHKILVENPSARITIPDIKKDRW 263
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 131/267 (49%), Gaps = 14/267 (5%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
++ + + LG G +G T E A K + +K +D +++++E+ I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 61
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
H N+V + + + YL +E C GGELFDRI E A ++ V
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
H G+ HRD+KPEN L E LK DFGL+ F+ + ++ G+ Y+APE+
Sbjct: 121 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
L+R + +DVWS G+++ +L G P+ ++ ++ + K + +PW K+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSA 236
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW 340
L+ +L NP R+T+ ++ ++ W
Sbjct: 237 PLALLHKILVENPSARITIPDIKKDRW 263
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 131/267 (49%), Gaps = 14/267 (5%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
++ + + LG G +G T E A K + +K +D +++++E+ I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 61
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
H N+V + + + YL +E C GGELFDRI E A ++ V
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
H G+ HRD+KPEN L E LK DFGL+ F+ + ++ G+ Y+APE+
Sbjct: 121 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
L+R + +DVWS G+++ +L G P+ ++ ++ + K + +PW K+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSA 236
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW 340
L+ +L NP R+T+ ++ ++ W
Sbjct: 237 PLALLHKILVENPSARITIPDIKKDRW 263
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 131/267 (49%), Gaps = 14/267 (5%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
++ + + LG G +G T E A K + +K +D +++++E+ I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 61
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
H N+V + + + YL +E C GGELFDRI E A ++ V
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
H G+ HRD+KPEN L E LK DFGL+ F+ + ++ G+ Y+APE+
Sbjct: 121 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
L+R + +DVWS G+++ +L G P+ ++ ++ + K + +PW K+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSA 236
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW 340
L+ +L NP R+T+ ++ ++ W
Sbjct: 237 PLALLHKILVENPSARITIPDIKKDRW 263
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 131/267 (49%), Gaps = 14/267 (5%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
++ + + LG G +G T E A K + +K +D +++++E+ I + L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 62
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
H N+V + + + YL +E C GGELFDRI E A ++ V
Sbjct: 63 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
H G+ HRD+KPEN L E LK DFGL+ F+ + ++ G+ Y+APE+
Sbjct: 122 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
L+R + +DVWS G+++ +L G P+ ++ ++ + K + +PW K+
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSA 237
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW 340
L+ +L NP R+T+ ++ ++ W
Sbjct: 238 PLALLHKILVENPSARITIPDIKKDRW 264
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 131/267 (49%), Gaps = 14/267 (5%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
++ + + LG G +G T E A K + +K +D +++++E+ I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 61
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
H N+V + + + YL +E C GGELFDRI E A ++ V
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
H G+ HRD+KPEN L E LK DFGL+ F+ + ++ G+ Y+APE+
Sbjct: 121 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
L+R + +DVWS G+++ +L G P+ ++ ++ + K + +PW K+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSA 236
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW 340
L+ +L NP R+T+ ++ ++ W
Sbjct: 237 PLALLHKILVENPSARITIPDIKKDRW 263
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 130/267 (48%), Gaps = 14/267 (5%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
++ + + LG G +G T E A K + +K +D +++++E+ I L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINAML 62
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
H N+V + + + YL +E C GGELFDRI E A ++ V
Sbjct: 63 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
H G+ HRD+KPEN L E LK DFGL+ F+ + ++ G+ Y+APE+
Sbjct: 122 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
L+R + +DVWS G+++ +L G P+ ++ ++ + K + +PW K+
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSA 237
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW 340
L+ +L NP R+T+ ++ ++ W
Sbjct: 238 PLALLHKILVENPSARITIPDIKKDRW 264
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 139/275 (50%), Gaps = 34/275 (12%)
Query: 89 LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
+G G +G ++ ++TG+ A K + T + +++++E+ +++ H NI TY
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDV----TGDEEEEIKQEINMLKKYSHHRNIATYY 87
Query: 149 EAYEDK------DAIYLVMELCEGGELFDRIVNKGHYT--ERAAAAVGKTILRIVKVCHE 200
A+ K D ++LVME C G + D I N T E A + + ILR + H+
Sbjct: 88 GAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ 147
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF-KPGEQFCEIVGSPYYMAPEVLRRN 259
+ V+HRD+K +N L +EN+++K +DFG+S + + +G+PY+MAPEV+ +
Sbjct: 148 HKVIHRDIKGQNVLL---TENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACD 204
Query: 260 YGPEI------DVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV--- 310
P+ D+WS G+ + G PP +R R+P P++
Sbjct: 205 ENPDATYDFKSDLWSLGITAIEMAEGAPPL-------CDMHPMRALFLIPRNPAPRLKSK 257
Query: 311 --SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
SK+ + +++ L N R E+++++P+I++
Sbjct: 258 KWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRD 292
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 130/267 (48%), Gaps = 14/267 (5%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
++ + + LG G G T E A K + +K +D +++++E+ I + L
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 61
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
H N+V + + + YL +E C GGELFDRI E A ++ V
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
H G+ HRD+KPEN L E LK DFGL+ F+ + ++ G+ Y+APE+
Sbjct: 121 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
L+R + +DVWS G+++ +L G P+ ++ ++ + K + +PW K+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSA 236
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW 340
L+ +L NP R+T+ ++ ++ W
Sbjct: 237 PLALLHKILVENPSARITIPDIKKDRW 263
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 121/262 (46%), Gaps = 18/262 (6%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
L + + +GRG + +T YA K + KE + + DID V+ E +
Sbjct: 19 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 78
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
HP +V ++ + ++ V+E GG+L + + E A I + H
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 138
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSPYYMAPEVLR- 257
E G+++RDLK +N L +K D+G+ +PG+ G+P Y+APE+LR
Sbjct: 139 ERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRG 195
Query: 258 RNYGPEIDVWSAGVIIYILLCGVPPF---------WAETEEGIAHAIIRGKIDFERDPWP 308
+YG +D W+ GV+++ ++ G PF TE+ + I+ +I R
Sbjct: 196 EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR---- 251
Query: 309 KVSKEAKELVKNMLDPNPYNRL 330
+S +A ++K+ L+ +P RL
Sbjct: 252 SMSVKAASVLKSFLNKDPKERL 273
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 121/262 (46%), Gaps = 18/262 (6%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
L + + +GRG + +T YA K + KE + + DID V+ E +
Sbjct: 4 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 63
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
HP +V ++ + ++ V+E GG+L + + E A I + H
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 123
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSPYYMAPEVLR- 257
E G+++RDLK +N L +K D+G+ +PG+ G+P Y+APE+LR
Sbjct: 124 ERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRG 180
Query: 258 RNYGPEIDVWSAGVIIYILLCGVPPF---------WAETEEGIAHAIIRGKIDFERDPWP 308
+YG +D W+ GV+++ ++ G PF TE+ + I+ +I R
Sbjct: 181 EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR---- 236
Query: 309 KVSKEAKELVKNMLDPNPYNRL 330
+S +A ++K+ L+ +P RL
Sbjct: 237 SLSVKAASVLKSFLNKDPKERL 258
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 132/274 (48%), Gaps = 16/274 (5%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
D + + +G+G FG + +T + YA K + K+K ++ +V +E++IM+ L
Sbjct: 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL- 72
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HP +V +++D++ +++V++L GG+L + H+ E ++ +
Sbjct: 73 EHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQ 132
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRN 259
++HRD+KP+N L E+ + DF ++ Q + G+ YMAPE+
Sbjct: 133 NQRIIHRDMKPDNILL---DEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSR 189
Query: 260 ----YGPEIDVWSAGVIIYILLCGVPPFW---AETEEGIAHAIIRGKIDFERDPWPKVSK 312
Y +D WS GV Y LL G P+ + + + I H + + W S+
Sbjct: 190 KGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYP-SAW---SQ 245
Query: 313 EAKELVKNMLDPNPYNRLT-LEEVLENPWIKNDN 345
E L+K +L+PNP R + L +V P++ + N
Sbjct: 246 EMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDIN 279
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 105/203 (51%), Gaps = 16/203 (7%)
Query: 144 IVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
++ + +E D+ L++E E +LFD I +G E A + +L V+ CH G
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 177
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR--RNY 260
V+HRD+K EN L +LK IDFG K + + G+ Y PE +R R +
Sbjct: 178 VLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYH 234
Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
G VWS G+++Y ++CG PF + E IIRG++ F + +VS E + L++
Sbjct: 235 GRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIRW 284
Query: 321 MLDPNPYNRLTLEEVLENPWIKN 343
L P +R T EE+ +PW+++
Sbjct: 285 CLALRPSDRPTFEEIQNHPWMQD 307
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 121/262 (46%), Gaps = 18/262 (6%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
L + + +GRG + +T YA K + KE + + DID V+ E +
Sbjct: 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 67
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
HP +V ++ + ++ V+E GG+L + + E A I + H
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 127
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSPYYMAPEVLR- 257
E G+++RDLK +N L +K D+G+ +PG+ G+P Y+APE+LR
Sbjct: 128 ERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRG 184
Query: 258 RNYGPEIDVWSAGVIIYILLCGVPPF---------WAETEEGIAHAIIRGKIDFERDPWP 308
+YG +D W+ GV+++ ++ G PF TE+ + I+ +I R
Sbjct: 185 EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR---- 240
Query: 309 KVSKEAKELVKNMLDPNPYNRL 330
+S +A ++K+ L+ +P RL
Sbjct: 241 SLSVKAASVLKSFLNKDPKERL 262
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 135/275 (49%), Gaps = 18/275 (6%)
Query: 65 FQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID 124
FQ + + N L + K++GRG+F ++ + G A KK+ L
Sbjct: 16 FQPQKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKA 75
Query: 125 IDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAA 184
D +E+++++ L HPN++ Y ++ + + + +V+EL + G+L R++ H+ ++
Sbjct: 76 RADCIKEIDLLKQL-NHPNVIKYYASFIEDNELNIVLELADAGDL-SRMIK--HFKKQKR 131
Query: 185 AAVGKTILR-IVKVC------HENGVMHRDLKPEN-FLFADGSENSQLKAIDFGLSIFFK 236
+T+ + V++C H VMHRD+KP N F+ A G +K D GL FF
Sbjct: 132 LIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGV----VKLGDLGLGRFFS 187
Query: 237 PGEQFCE-IVGSPYYMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHA 294
+VG+PYYM+PE + N Y + D+WS G ++Y + PF+ + +
Sbjct: 188 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLC 247
Query: 295 IIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNR 329
+ D+ P S+E ++LV ++P+P R
Sbjct: 248 KKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKR 282
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 121/262 (46%), Gaps = 18/262 (6%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
L + + +GRG + +T YA + + KE + + DID V+ E +
Sbjct: 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQAS 110
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
HP +V ++ + ++ V+E GG+L + + E A I + H
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 170
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSPYYMAPEVLR- 257
E G+++RDLK +N L +K D+G+ +PG+ G+P Y+APE+LR
Sbjct: 171 ERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRG 227
Query: 258 RNYGPEIDVWSAGVIIYILLCGVPPF---------WAETEEGIAHAIIRGKIDFERDPWP 308
+YG +D W+ GV+++ ++ G PF TE+ + I+ +I R
Sbjct: 228 EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR---- 283
Query: 309 KVSKEAKELVKNMLDPNPYNRL 330
+S +A ++K+ L+ +P RL
Sbjct: 284 SLSVKAASVLKSFLNKDPKERL 305
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 133/272 (48%), Gaps = 16/272 (5%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
++ + K LG+G FG +T + +A K + K+ + + D++ E ++
Sbjct: 17 IEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 76
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HP + ++ K+ ++ VME GG+L I + + A I+ ++ H
Sbjct: 77 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH 136
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE----QFCEIVGSPYYMAPEV 255
G+++RDLK +N L ++ +K DFG+ G+ +FC G+P Y+APE+
Sbjct: 137 SKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDAKTNEFC---GTPDYIAPEI 190
Query: 256 LR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
L + Y +D WS GV++Y +L G PF + EE + H+I + R W + KEA
Sbjct: 191 LLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR--W--LEKEA 246
Query: 315 KELVKNMLDPNPYNRLTLE-EVLENPWIKNDN 345
K+L+ + P RL + ++ ++P + N
Sbjct: 247 KDLLVKLFVREPEKRLGVRGDIRQHPLFREIN 278
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 136/296 (45%), Gaps = 38/296 (12%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
++KY +++G G +G+ ++ + GET+A KKI EK I +R E+ I++ L
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIR-EISILKEL- 57
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
KH NIV + K + LV E + +L D V +G A + +L +
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAY 115
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEIVGSPYYMAPEVL 256
CH+ V+HRDLKP+N L + +LK DFGL+ F P ++ V + +Y AP+VL
Sbjct: 116 CHDRRVLHRDLKPQNLLI---NREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVL 172
Query: 257 --RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
+ Y ID+WS G I ++ G P F +E I R WP V++
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELP 232
Query: 315 K-------------------------ELVKNMLDPNPYNRLTLEEVLENPWIKNDN 345
K +L+ ML +P R+T ++ LE+ + K +N
Sbjct: 233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKENN 288
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 136/296 (45%), Gaps = 38/296 (12%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
++KY +++G G +G+ ++ + GET+A KKI EK I +R E+ I++ L
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIR-EISILKEL- 57
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
KH NIV + K + LV E + +L D V +G A + +L +
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAY 115
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEIVGSPYYMAPEVL 256
CH+ V+HRDLKP+N L + +LK DFGL+ F P ++ V + +Y AP+VL
Sbjct: 116 CHDRRVLHRDLKPQNLLI---NREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVL 172
Query: 257 --RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
+ Y ID+WS G I ++ G P F +E I R WP V++
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELP 232
Query: 315 K-------------------------ELVKNMLDPNPYNRLTLEEVLENPWIKNDN 345
K +L+ ML +P R+T ++ LE+ + K +N
Sbjct: 233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKENN 288
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 132/272 (48%), Gaps = 16/272 (5%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
++ + K LG+G FG +T + +A K + K+ + + D++ E ++
Sbjct: 16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 75
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+HP + ++ K+ ++ VME GG+L I + + A I+ ++ H
Sbjct: 76 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH 135
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE----QFCEIVGSPYYMAPEV 255
G+++RDLK +N L ++ +K DFG+ G+ FC G+P Y+APE+
Sbjct: 136 SKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDAKTNXFC---GTPDYIAPEI 189
Query: 256 LR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
L + Y +D WS GV++Y +L G PF + EE + H+I + R W + KEA
Sbjct: 190 LLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR--W--LEKEA 245
Query: 315 KELVKNMLDPNPYNRLTLE-EVLENPWIKNDN 345
K+L+ + P RL + ++ ++P + N
Sbjct: 246 KDLLVKLFVREPEKRLGVRGDIRQHPLFREIN 277
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 107/230 (46%), Gaps = 19/230 (8%)
Query: 83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHLP 139
+ + LG G FG + +TGE A K+ + E+ + R E++IM+ L
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQC-----RQELSPKNRERWCLEIQIMKKL- 69
Query: 140 KHPNIVTYKEAYE------DKDAIYLVMELCEGGEL---FDRIVNKGHYTERAAAAVGKT 190
HPN+V+ +E + D L ME CEGG+L ++ N E +
Sbjct: 70 NHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSD 129
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
I ++ HEN ++HRDLKPEN + G + K ID G + GE E VG+ Y
Sbjct: 130 ISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQY 189
Query: 251 MAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGK 299
+APE+L ++ Y +D WS G + + + G PF + H +R K
Sbjct: 190 LAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREK 239
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 107/230 (46%), Gaps = 19/230 (8%)
Query: 83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHLP 139
+ + LG G FG + +TGE A K+ + E+ + R E++IM+ L
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQC-----RQELSPKNRERWCLEIQIMKKL- 70
Query: 140 KHPNIVTYKEAYE------DKDAIYLVMELCEGGEL---FDRIVNKGHYTERAAAAVGKT 190
HPN+V+ +E + D L ME CEGG+L ++ N E +
Sbjct: 71 NHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSD 130
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
I ++ HEN ++HRDLKPEN + G + K ID G + GE E VG+ Y
Sbjct: 131 ISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQY 190
Query: 251 MAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGK 299
+APE+L ++ Y +D WS G + + + G PF + H +R K
Sbjct: 191 LAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREK 240
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 136/296 (45%), Gaps = 38/296 (12%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
++KY +++G G +G+ ++ + GET+A KKI EK I +R E+ I++ L
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIR-EISILKEL- 57
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
KH NIV + K + LV E + +L D V +G A + +L +
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAY 115
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEIVGSPYYMAPEVL 256
CH+ V+HRDLKP+N L + +LK DFGL+ F P ++ + + +Y AP+VL
Sbjct: 116 CHDRRVLHRDLKPQNLLI---NREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVL 172
Query: 257 --RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
+ Y ID+WS G I ++ G P F +E I R WP V++
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELP 232
Query: 315 K-------------------------ELVKNMLDPNPYNRLTLEEVLENPWIKNDN 345
K +L+ ML +P R+T ++ LE+ + K +N
Sbjct: 233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKENN 288
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 138/318 (43%), Gaps = 55/318 (17%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
NI + LG G +G+ TGE A KKI E + RE++I++H
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI--EPFDKPLFALRTLREIKILKH 65
Query: 138 LPKHPNIVTY-----KEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL 192
KH NI+T +++E+ + +Y++ EL + R+++ ++ L
Sbjct: 66 F-KHENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTL 122
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF---------KPGEQ--F 241
R VKV H + V+HRDLKP N L + N LK DFGL+ G+Q
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 242 CEIVGSPYYMAPEVLRRN--YGPEIDVWSAGVIIYILLCGVPPFWAE------------- 286
E V + +Y APEV+ + Y +DVWS G I+ L P F
Sbjct: 180 VEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGII 239
Query: 287 -----------TEEGIAHAIIRGKIDFERDP----WPKVSKEAKELVKNMLDPNPYNRLT 331
E A I+ + P +P+V+ + +L++ ML +P R+T
Sbjct: 240 GTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRIT 299
Query: 332 LEEVLENPWIKNDNHAPN 349
+E LE+P+++ H PN
Sbjct: 300 AKEALEHPYLQT-YHDPN 316
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 138/318 (43%), Gaps = 55/318 (17%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
NI + LG G +G+ TGE A KKI E + RE++I++H
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI--EPFDKPLFALRTLREIKILKH 65
Query: 138 LPKHPNIVTY-----KEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL 192
KH NI+T +++E+ + +Y++ EL + R+++ ++ L
Sbjct: 66 F-KHENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTL 122
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF---------KPGEQ--F 241
R VKV H + V+HRDLKP N L + N LK DFGL+ G+Q
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 242 CEIVGSPYYMAPEVLRRN--YGPEIDVWSAGVIIYILLCGVPPFWAE------------- 286
E V + +Y APEV+ + Y +DVWS G I+ L P F
Sbjct: 180 TEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGII 239
Query: 287 -----------TEEGIAHAIIRGKIDFERDP----WPKVSKEAKELVKNMLDPNPYNRLT 331
E A I+ + P +P+V+ + +L++ ML +P R+T
Sbjct: 240 GTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRIT 299
Query: 332 LEEVLENPWIKNDNHAPN 349
+E LE+P+++ H PN
Sbjct: 300 AKEALEHPYLQT-YHDPN 316
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 119/260 (45%), Gaps = 15/260 (5%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
+E+G G FG + ++ E A KK++ ++ D+ +EV ++ L +HPN +
Sbjct: 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQ 118
Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
Y+ Y + +LVME C G V+K E AAV L+ + H + ++HR
Sbjct: 119 YRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHR 178
Query: 207 DLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL----RRNYGP 262
D+K N L SE +K DFG + P F VG+PY+MAPEV+ Y
Sbjct: 179 DVKAGNILL---SEPGLVKLGDFGSASIMAPANXF---VGTPYWMAPEVILAMDEGQYDG 232
Query: 263 EIDVWSAGVIIYILLCGVPP-FWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNM 321
++DVWS G+ L PP F + H + W S+ + V +
Sbjct: 233 KVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---SEYFRNFVDSC 289
Query: 322 LDPNPYNRLTLEEVLENPWI 341
L P +R T E +L++ ++
Sbjct: 290 LQKIPQDRPTSEVLLKHRFV 309
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 138/318 (43%), Gaps = 55/318 (17%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
NI + LG G +G+ TGE A KKI E + RE++I++H
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI--EPFDKPLFALRTLREIKILKH 65
Query: 138 LPKHPNIVTY-----KEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL 192
KH NI+T +++E+ + +Y++ EL + R+++ ++ L
Sbjct: 66 F-KHENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTL 122
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF---------KPGEQ--F 241
R VKV H + V+HRDLKP N L + N LK DFGL+ G+Q
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 242 CEIVGSPYYMAPEVLRRN--YGPEIDVWSAGVIIYILLCGVPPFWAE------------- 286
E V + +Y APEV+ + Y +DVWS G I+ L P F
Sbjct: 180 TEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGII 239
Query: 287 -----------TEEGIAHAIIRGKIDFERDP----WPKVSKEAKELVKNMLDPNPYNRLT 331
E A I+ + P +P+V+ + +L++ ML +P R+T
Sbjct: 240 GTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRIT 299
Query: 332 LEEVLENPWIKNDNHAPN 349
+E LE+P+++ H PN
Sbjct: 300 AKEALEHPYLQT-YHDPN 316
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 131/284 (46%), Gaps = 26/284 (9%)
Query: 83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
Y+ K++G G Q E + YA K + E+ + +D R E+ + L +H
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHS 115
Query: 143 NIVTYKEAYEDKDA-IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
+ + YE D IY+VME C +L + K + K +L V H++
Sbjct: 116 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC---EIVGSPYYMAPEVLR- 257
G++H DLKP NFL DG LK IDFG++ +P VG+ YM PE ++
Sbjct: 175 GIVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 230
Query: 258 ----RNYG-------PEIDVWSAGVIIYILLCGVPPFWAETEE-GIAHAIIRGKIDFERD 305
R G P+ DVWS G I+Y + G PF + HAII + E
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 290
Query: 306 PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
P+ K+ ++++K L +P R+++ E+L +P+++ H N
Sbjct: 291 DIPE--KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVN 332
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 131/284 (46%), Gaps = 26/284 (9%)
Query: 83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
Y+ K++G G Q E + YA K + E+ + +D R E+ + L +H
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHS 115
Query: 143 NIVTYKEAYEDKDA-IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
+ + YE D IY+VME C +L + K + K +L V H++
Sbjct: 116 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC---EIVGSPYYMAPEVLR- 257
G++H DLKP NFL DG LK IDFG++ +P VG+ YM PE ++
Sbjct: 175 GIVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKD 230
Query: 258 ----RNYG-------PEIDVWSAGVIIYILLCGVPPFWAETEE-GIAHAIIRGKIDFERD 305
R G P+ DVWS G I+Y + G PF + HAII + E
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 290
Query: 306 PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
P+ K+ ++++K L +P R+++ E+L +P+++ H N
Sbjct: 291 DIPE--KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVN 332
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 131/284 (46%), Gaps = 26/284 (9%)
Query: 83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
Y+ K++G G Q E + YA K + E+ + +D R E+ + L +H
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHS 115
Query: 143 NIVTYKEAYEDKDA-IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
+ + YE D IY+VME C +L + K + K +L V H++
Sbjct: 116 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC---EIVGSPYYMAPEVLR- 257
G++H DLKP NFL DG LK IDFG++ +P VG+ YM PE ++
Sbjct: 175 GIVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 230
Query: 258 ----RNYG-------PEIDVWSAGVIIYILLCGVPPFWAETEE-GIAHAIIRGKIDFERD 305
R G P+ DVWS G I+Y + G PF + HAII + E
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 290
Query: 306 PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
P+ K+ ++++K L +P R+++ E+L +P+++ H N
Sbjct: 291 DIPE--KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVN 332
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 119/260 (45%), Gaps = 15/260 (5%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
+E+G G FG + ++ E A KK++ ++ D+ +EV ++ L +HPN +
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQ 79
Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
Y+ Y + +LVME C G V+K E AAV L+ + H + ++HR
Sbjct: 80 YRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHR 139
Query: 207 DLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL----RRNYGP 262
D+K N L SE +K DFG + P F VG+PY+MAPEV+ Y
Sbjct: 140 DVKAGNILL---SEPGLVKLGDFGSASIMAPANXF---VGTPYWMAPEVILAMDEGQYDG 193
Query: 263 EIDVWSAGVIIYILLCGVPP-FWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNM 321
++DVWS G+ L PP F + H + W S+ + V +
Sbjct: 194 KVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---SEYFRNFVDSC 250
Query: 322 LDPNPYNRLTLEEVLENPWI 341
L P +R T E +L++ ++
Sbjct: 251 LQKIPQDRPTSEVLLKHRFV 270
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 131/284 (46%), Gaps = 26/284 (9%)
Query: 83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
Y+ K++G G Q E + YA K + E+ + +D R E+ + L +H
Sbjct: 30 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHS 87
Query: 143 NIVTYKEAYEDKDA-IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
+ + YE D IY+VME C +L + K + K +L V H++
Sbjct: 88 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 146
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC---EIVGSPYYMAPEVLR- 257
G++H DLKP NFL DG LK IDFG++ +P VG+ YM PE ++
Sbjct: 147 GIVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKD 202
Query: 258 ----RNYG-------PEIDVWSAGVIIYILLCGVPPFWAETEE-GIAHAIIRGKIDFERD 305
R G P+ DVWS G I+Y + G PF + HAII + E
Sbjct: 203 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 262
Query: 306 PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
P+ K+ ++++K L +P R+++ E+L +P+++ H N
Sbjct: 263 DIPE--KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVN 304
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 131/284 (46%), Gaps = 26/284 (9%)
Query: 83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
Y+ K++G G Q E + YA K + E+ + +D R E+ + L +H
Sbjct: 11 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHS 68
Query: 143 NIVTYKEAYEDKDA-IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
+ + YE D IY+VME C +L + K + K +L V H++
Sbjct: 69 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 127
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC---EIVGSPYYMAPEVLR- 257
G++H DLKP NFL DG LK IDFG++ +P VG+ YM PE ++
Sbjct: 128 GIVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 183
Query: 258 ----RNYG-------PEIDVWSAGVIIYILLCGVPPFWAETEE-GIAHAIIRGKIDFERD 305
R G P+ DVWS G I+Y + G PF + HAII + E
Sbjct: 184 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 243
Query: 306 PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
P+ K+ ++++K L +P R+++ E+L +P+++ H N
Sbjct: 244 DIPE--KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVN 285
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 43/294 (14%)
Query: 66 QLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
++ +VV+ P +G + YT K +G G FG+ +Q ++GE A KK+ ++K
Sbjct: 36 KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 95
Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGH 178
RE++IMR L H NIV + + E KD +YL + L E R+ H
Sbjct: 96 -------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--H 145
Query: 179 YTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
Y+ RA + + R + H G+ HRD+KP+N L + + LK DFG
Sbjct: 146 YS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 202
Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
+ GE + S YY APE++ +Y IDVWSAG ++ LL G P F ++
Sbjct: 203 SAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS- 261
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
G+ + K+ + +E ++ M +PN Y ++ +PW K
Sbjct: 262 -GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFKFPQIKAHPWTK 303
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 131/284 (46%), Gaps = 26/284 (9%)
Query: 83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
Y+ K++G G Q E + YA K + E+ + +D R E+ + L +H
Sbjct: 30 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHS 87
Query: 143 NIVTYKEAYEDKDA-IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
+ + YE D IY+VME C +L + K + K +L V H++
Sbjct: 88 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 146
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC---EIVGSPYYMAPEVLR- 257
G++H DLKP NFL DG LK IDFG++ +P VG+ YM PE ++
Sbjct: 147 GIVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 202
Query: 258 ----RNYG-------PEIDVWSAGVIIYILLCGVPPFWAETEE-GIAHAIIRGKIDFERD 305
R G P+ DVWS G I+Y + G PF + HAII + E
Sbjct: 203 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 262
Query: 306 PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
P+ K+ ++++K L +P R+++ E+L +P+++ H N
Sbjct: 263 DIPE--KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVN 304
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 122/271 (45%), Gaps = 22/271 (8%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD---VRREVEIMRHL 138
+Y G LG+G FG + A K I + ++ + D EV ++ +
Sbjct: 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91
Query: 139 PK---HPNIVTYKEAYEDKDAIYLVME-LCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
HP ++ + +E ++ LV+E +LFD I KG E + ++
Sbjct: 92 GAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAA 151
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
++ CH GV+HRD+K EN L K IDFG E + + G+ Y PE
Sbjct: 152 IQHCHSRGVVHRDIKDENILI--DLRRGCAKLIDFGSGALLH-DEPYTDFDGTRVYSPPE 208
Query: 255 VLRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSK 312
+ R+ + VWS G+++Y ++CG PF + E I+ ++ F VS
Sbjct: 209 WISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE------ILEAELHFPA----HVSP 258
Query: 313 EAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
+ L++ L P P +R +LEE+L +PW++
Sbjct: 259 DCCALIRRCLAPKPSSRPSLEEILLDPWMQT 289
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 43/294 (14%)
Query: 66 QLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
++ +VV+ P +G + YT K +G G FG+ +Q ++GE A KK+ ++K
Sbjct: 81 KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 140
Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGH 178
RE++IMR L H NIV + + E KD +YL + L E R+ H
Sbjct: 141 -------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--H 190
Query: 179 YTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
Y+ RA + + R + H G+ HRD+KP+N L + + LK DFG
Sbjct: 191 YS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 247
Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
+ GE + S YY APE++ +Y IDVWSAG ++ LL G P F ++
Sbjct: 248 SAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS- 306
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
G+ + K+ + +E ++ M +PN Y ++ +PW K
Sbjct: 307 -GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFKFPQIKAHPWTK 348
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 43/294 (14%)
Query: 66 QLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
++ +VV+ P +G + YT K +G G FG+ +Q ++GE A KK+ ++K
Sbjct: 36 KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 95
Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGH 178
RE++IMR L H NIV + + E KD +YL + L E R+ H
Sbjct: 96 -------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--H 145
Query: 179 YTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
Y+ RA + + R + H G+ HRD+KP+N L + + LK DFG
Sbjct: 146 YS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 202
Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
+ GE + S YY APE++ +Y IDVWSAG ++ LL G P F ++
Sbjct: 203 SAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS- 261
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
G+ + K+ + +E ++ M +PN Y ++ +PW K
Sbjct: 262 -GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFKFPQIKAHPWTK 303
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 43/294 (14%)
Query: 66 QLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
++ +VV+ P +G + YT K +G G FG+ +Q ++GE A KK+ ++K
Sbjct: 30 KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 89
Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGH 178
RE++IMR L H NIV + + E KD +YL + L E R+ H
Sbjct: 90 -------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--H 139
Query: 179 YTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
Y+ RA + + R + H G+ HRD+KP+N L + + LK DFG
Sbjct: 140 YS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 196
Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
+ GE + S YY APE++ +Y IDVWSAG ++ LL G P F ++
Sbjct: 197 SAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS- 255
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
G+ + K+ + +E ++ M +PN Y ++ +PW K
Sbjct: 256 -GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFKFPQIKAHPWTK 297
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 43/294 (14%)
Query: 66 QLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
++ +VV+ P +G + YT K +G G FG+ +Q ++GE A KK+ ++K
Sbjct: 40 KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 99
Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGH 178
RE++IMR L H NIV + + E KD +YL + L E R+ H
Sbjct: 100 -------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--H 149
Query: 179 YTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
Y+ RA + + R + H G+ HRD+KP+N L + + LK DFG
Sbjct: 150 YS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 206
Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
+ GE + S YY APE++ +Y IDVWSAG ++ LL G P F ++
Sbjct: 207 SAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS- 265
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
G+ + K+ + +E ++ M +PN Y ++ +PW K
Sbjct: 266 -GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFKFPQIKAHPWTK 307
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 43/294 (14%)
Query: 66 QLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
++ +VV+ P +G + YT K +G G FG+ +Q ++GE A KK+ ++K
Sbjct: 38 KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 97
Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGH 178
RE++IMR L H NIV + + E KD +YL + L E R+ H
Sbjct: 98 -------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--H 147
Query: 179 YTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
Y+ RA + + R + H G+ HRD+KP+N L + + LK DFG
Sbjct: 148 YS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 204
Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
+ GE + S YY APE++ +Y IDVWSAG ++ LL G P F ++
Sbjct: 205 SAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS- 263
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
G+ + K+ + +E ++ M +PN Y ++ +PW K
Sbjct: 264 -GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFKFPQIKAHPWTK 305
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 131/284 (46%), Gaps = 26/284 (9%)
Query: 83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
Y+ K++G G Q E + YA K + E+ + +D R E+ + L +H
Sbjct: 14 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHS 71
Query: 143 NIVTYKEAYEDKDA-IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
+ + YE D IY+VME C +L + K + K +L V H++
Sbjct: 72 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 130
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC---EIVGSPYYMAPEVLR- 257
G++H DLKP NFL DG LK IDFG++ +P VG+ YM PE ++
Sbjct: 131 GIVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 186
Query: 258 ----RNYG-------PEIDVWSAGVIIYILLCGVPPFWAETEE-GIAHAIIRGKIDFERD 305
R G P+ DVWS G I+Y + G PF + HAII + E
Sbjct: 187 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 246
Query: 306 PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
P+ K+ ++++K L +P R+++ E+L +P+++ H N
Sbjct: 247 DIPE--KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVN 288
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 139/304 (45%), Gaps = 43/304 (14%)
Query: 56 SNVDKKSISFQLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACK 112
S V + ++ +VV+ P +G + YT K +G G FG+ +Q ++GE A K
Sbjct: 4 SKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK 63
Query: 113 KIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGE 168
K+ ++K RE++IMR L H NIV + + E KD +YL + L E
Sbjct: 64 KVLQDKRFKN-------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 115
Query: 169 LFDRIVNKGHYTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSE 220
R+ HY+ RA + + R + H G+ HRD+KP+N L +
Sbjct: 116 TVYRVAR--HYS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPD 170
Query: 221 NSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLC 278
+ LK DFG + GE + S YY APE++ +Y IDVWSAG ++ LL
Sbjct: 171 TAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 230
Query: 279 GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN 338
G P F ++ G+ + K+ + +E ++ M +PN Y ++ +
Sbjct: 231 GQPIFPGDS--GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFKFPQIKAH 277
Query: 339 PWIK 342
PW K
Sbjct: 278 PWTK 281
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 118/255 (46%), Gaps = 13/255 (5%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
L + F LG+G FG T E YA K + K+ + + D++ E ++
Sbjct: 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG 78
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
K P + ++ D +Y VME GG+L I G + E A I +
Sbjct: 79 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ 138
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGL---SIFFKPGEQFCEIVGSPYYMAPEVL 256
G+++RDLK +N + +K DFG+ +I+ G G+P Y+APE++
Sbjct: 139 SKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIW--DGVTTKXFCGTPDYIAPEII 193
Query: 257 -RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK 315
+ YG +D W+ GV++Y +L G PF E E+ + +I+ + + + +SKEA
Sbjct: 194 AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAV 249
Query: 316 ELVKNMLDPNPYNRL 330
+ K ++ +P RL
Sbjct: 250 AICKGLMTKHPGKRL 264
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 118/255 (46%), Gaps = 13/255 (5%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
L + F LG+G FG T E YA K + K+ + + D++ E ++
Sbjct: 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG 399
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
K P + ++ D +Y VME GG+L I G + E A I +
Sbjct: 400 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ 459
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGL---SIFFKPGEQFCEIVGSPYYMAPEVL 256
G+++RDLK +N + +K DFG+ +I+ G G+P Y+APE++
Sbjct: 460 SKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIW--DGVTTKXFCGTPDYIAPEII 514
Query: 257 -RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK 315
+ YG +D W+ GV++Y +L G PF E E+ + +I+ + + + +SKEA
Sbjct: 515 AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS----MSKEAV 570
Query: 316 ELVKNMLDPNPYNRL 330
+ K ++ +P RL
Sbjct: 571 AICKGLMTKHPGKRL 585
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 43/294 (14%)
Query: 66 QLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
++ +VV+ P +G + YT K +G G FG+ +Q ++GE A KK+ ++K
Sbjct: 7 KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 66
Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGH 178
RE++IMR L H NIV + + E KD +YL + L E R+ H
Sbjct: 67 -------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--H 116
Query: 179 YTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
Y+ RA + + R + H G+ HRD+KP+N L + + LK DFG
Sbjct: 117 YS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 173
Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
+ GE + S YY APE++ +Y IDVWSAG ++ LL G P F ++
Sbjct: 174 SAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS- 232
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
G+ + K+ + +E ++ M +PN Y ++ +PW K
Sbjct: 233 -GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFKFPQIKAHPWTK 274
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 43/294 (14%)
Query: 66 QLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
++ +VV+ P +G + YT K +G G FG+ +Q ++GE A KK+ ++K
Sbjct: 14 KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 73
Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGH 178
RE++IMR L H NIV + + E KD +YL + L E R+ H
Sbjct: 74 -------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--H 123
Query: 179 YTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
Y+ RA + + R + H G+ HRD+KP+N L + + LK DFG
Sbjct: 124 YS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 180
Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
+ GE + S YY APE++ +Y IDVWSAG ++ LL G P F ++
Sbjct: 181 SAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS- 239
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
G+ + K+ + +E ++ M +PN Y ++ +PW K
Sbjct: 240 -GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFKFPQIKAHPWTK 281
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 131/284 (46%), Gaps = 26/284 (9%)
Query: 83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
Y+ K++G G Q E + YA K + E+ + +D R E+ + L +H
Sbjct: 10 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHS 67
Query: 143 NIVTYKEAYEDKDA-IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
+ + YE D IY+VME C +L + K + K +L V H++
Sbjct: 68 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 126
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC---EIVGSPYYMAPEVLR- 257
G++H DLKP NFL DG LK IDFG++ +P VG+ YM PE ++
Sbjct: 127 GIVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 182
Query: 258 ----RNYG-------PEIDVWSAGVIIYILLCGVPPFWAETEE-GIAHAIIRGKIDFERD 305
R G P+ DVWS G I+Y + G PF + HAII + E
Sbjct: 183 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 242
Query: 306 PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
P+ K+ ++++K L +P R+++ E+L +P+++ H N
Sbjct: 243 DIPE--KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVN 284
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 43/294 (14%)
Query: 66 QLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
++ +VV+ P +G + YT K +G G FG+ +Q ++GE A KK+ ++K
Sbjct: 21 KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 80
Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGH 178
RE++IMR L H NIV + + E KD +YL + L E R+ H
Sbjct: 81 -------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--H 130
Query: 179 YTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
Y+ RA + + R + H G+ HRD+KP+N L + + LK DFG
Sbjct: 131 YS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 187
Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
+ GE + S YY APE++ +Y IDVWSAG ++ LL G P F ++
Sbjct: 188 SAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS- 246
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
G+ + K+ + +E ++ M +PN Y ++ +PW K
Sbjct: 247 -GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFKFPQIKAHPWTK 288
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 43/294 (14%)
Query: 66 QLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
++ +VV+ P +G + YT K +G G FG+ +Q ++GE A KK+ ++K
Sbjct: 10 KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 69
Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGH 178
RE++IMR L H NIV + + E KD +YL + L E R+ H
Sbjct: 70 -------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--H 119
Query: 179 YTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
Y+ RA + + R + H G+ HRD+KP+N L + + LK DFG
Sbjct: 120 YS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 176
Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
+ GE + S YY APE++ +Y IDVWSAG ++ LL G P F ++
Sbjct: 177 SAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS- 235
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
G+ + K+ + +E ++ M +PN Y ++ +PW K
Sbjct: 236 -GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFKFPQIKAHPWTK 277
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 43/294 (14%)
Query: 66 QLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
++ +VV+ P +G + YT K +G G FG+ +Q ++GE A KK+ ++K
Sbjct: 15 KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 74
Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGH 178
RE++IMR L H NIV + + E KD +YL + L E R+ H
Sbjct: 75 -------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--H 124
Query: 179 YTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
Y+ RA + + R + H G+ HRD+KP+N L + + LK DFG
Sbjct: 125 YS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 181
Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
+ GE + S YY APE++ +Y IDVWSAG ++ LL G P F ++
Sbjct: 182 SAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS- 240
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
G+ + K+ + +E ++ M +PN Y ++ +PW K
Sbjct: 241 -GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFKFPQIKAHPWTK 282
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 43/294 (14%)
Query: 66 QLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
++ +VV+ P +G + YT K +G G FG+ +Q ++GE A KK+ ++K
Sbjct: 2 KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 61
Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGH 178
RE++IMR L H NIV + + E KD +YL + L E R+ H
Sbjct: 62 -------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVAR--H 111
Query: 179 YTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
Y+ RA + + R + H G+ HRD+KP+N L + + LK DFG
Sbjct: 112 YS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 168
Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
+ GE + S YY APE++ +Y IDVWSAG ++ LL G P F ++
Sbjct: 169 SAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS- 227
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
G+ + K+ + +E ++ M +PN Y ++ +PW K
Sbjct: 228 -GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFKFPQIKAHPWTK 269
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 117/257 (45%), Gaps = 23/257 (8%)
Query: 83 YTFGKELGRGEFG----ITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHL 138
+ F K +G+G FG H+ E+ YA K + K+ + + + + E ++
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEV----FYAVKVLQKKAILKKKEEKHIMSERNVLLKN 95
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
KHP +V +++ D +Y V++ GGELF + + + E A I +
Sbjct: 96 VKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYL 155
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI----FFKPGEQFCEIVGSPYYMAPE 254
H +++RDLKPEN L + DFGL FC G+P Y+APE
Sbjct: 156 HSLNIVYRDLKPENILL---DSQGHIVLTDFGLCKENIEHNSTTSTFC---GTPEYLAPE 209
Query: 255 VLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
VL + Y +D W G ++Y +L G+PPF++ + I+ + + P ++
Sbjct: 210 VLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK----PNITNS 265
Query: 314 AKELVKNMLDPNPYNRL 330
A+ L++ +L + RL
Sbjct: 266 ARHLLEGLLQKDRTKRL 282
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 43/294 (14%)
Query: 66 QLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
++ +VV+ P +G + YT K +G G FG+ +Q ++GE A KK+ ++K
Sbjct: 2 KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 61
Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGH 178
RE++IMR L H NIV + + E KD +YL + L E R+ H
Sbjct: 62 -------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--H 111
Query: 179 YTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
Y+ RA + + R + H G+ HRD+KP+N L + + LK DFG
Sbjct: 112 YS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 168
Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
+ GE + S YY APE++ +Y IDVWSAG ++ LL G P F ++
Sbjct: 169 SAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS- 227
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
G+ + K+ + +E ++ M +PN Y ++ +PW K
Sbjct: 228 -GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFKFPQIKAHPWTK 269
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 43/294 (14%)
Query: 66 QLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
++ +VV+ P +G + YT K +G G FG+ +Q ++GE A KK+ ++K
Sbjct: 6 KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 65
Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGH 178
RE++IMR L H NIV + + E KD +YL + L E R+ H
Sbjct: 66 -------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--H 115
Query: 179 YTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
Y+ RA + + R + H G+ HRD+KP+N L + + LK DFG
Sbjct: 116 YS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 172
Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
+ GE + S YY APE++ +Y IDVWSAG ++ LL G P F ++
Sbjct: 173 SAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS- 231
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
G+ + K+ + +E ++ M +PN Y ++ +PW K
Sbjct: 232 -GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFKFPQIKAHPWTK 273
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 43/294 (14%)
Query: 66 QLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
++ +VV+ P +G + YT K +G G FG+ +Q ++GE A KK+ ++K
Sbjct: 3 KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 62
Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGH 178
RE++IMR L H NIV + + E KD +YL + L E R+ H
Sbjct: 63 -------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--H 112
Query: 179 YTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
Y+ RA + + R + H G+ HRD+KP+N L + + LK DFG
Sbjct: 113 YS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 169
Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
+ GE + S YY APE++ +Y IDVWSAG ++ LL G P F ++
Sbjct: 170 SAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS- 228
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
G+ + K+ + +E ++ M +PN Y ++ +PW K
Sbjct: 229 -GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFKFPQIKAHPWTK 270
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 43/294 (14%)
Query: 66 QLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
++ +VV+ P +G + YT K +G G FG+ +Q ++GE A KK+ ++K
Sbjct: 2 KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 61
Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGH 178
RE++IMR L H NIV + + E KD +YL + L E R+ H
Sbjct: 62 -------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--H 111
Query: 179 YTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
Y+ RA + + R + H G+ HRD+KP+N L + + LK DFG
Sbjct: 112 YS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 168
Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
+ GE + S YY APE++ +Y IDVWSAG ++ LL G P F ++
Sbjct: 169 SAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS- 227
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
G+ + K+ + +E ++ M +PN Y ++ +PW K
Sbjct: 228 -GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFKFPQIKAHPWTK 269
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 43/294 (14%)
Query: 66 QLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
++ +VV+ P +G + YT K +G G FG+ +Q ++GE A KK+ ++K
Sbjct: 2 KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 61
Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGH 178
RE++IMR L H NIV + + E KD +YL + L E R+ H
Sbjct: 62 -------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--H 111
Query: 179 YTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
Y+ RA + + R + H G+ HRD+KP+N L + + LK DFG
Sbjct: 112 YS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 168
Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
+ GE + S YY APE++ +Y IDVWSAG ++ LL G P F ++
Sbjct: 169 SAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS- 227
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
G+ + K+ + +E ++ M +PN Y ++ +PW K
Sbjct: 228 -GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFKFPQIKAHPWTK 269
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 132/270 (48%), Gaps = 18/270 (6%)
Query: 88 ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
ELG G FG ++ ET A K I K+E +++D E++I+ HPNIV
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVI---DTKSEEELEDYMVEIDILASC-DHPNIVKL 99
Query: 148 KEAYEDKDAIYLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
+A+ ++ +++++E C GG + ++ + TE V K L + H+N ++HR
Sbjct: 100 LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHR 159
Query: 207 DLKPENFLFA-DGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSPYYMAPEVLR------R 258
DLK N LF DG +K DFG+S + ++ +G+PY+MAPEV+ R
Sbjct: 160 DLKAGNILFTLDGD----IKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDR 215
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
Y + DVWS G+ + + PP + I + + P + S K+ +
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSSNFKDFL 274
Query: 319 KNMLDPNPYNRLTLEEVLENPWIKNDNHAP 348
K L+ N R T ++L++P++ D++ P
Sbjct: 275 KKCLEKNVDARWTTSQLLQHPFVTVDSNKP 304
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 141/349 (40%), Gaps = 82/349 (23%)
Query: 75 AEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEI 134
+ ++L KY K+LG+G +GI + + TGE A KKI + + D RE+ I
Sbjct: 3 VDRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIF-DAFQNSTDAQRTFREIMI 61
Query: 135 MRHLPKHPNIVTY---KEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
+ L H NIV A D+D +YLV + E ++ V +
Sbjct: 62 LTELSGHENIVNLLNVLRADNDRD-VYLVFDYMETD--LHAVIRANILEPVHKQYVVYQL 118
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF---------------K 236
++++K H G++HRD+KP N L + +K DFGLS F +
Sbjct: 119 IKVIKYLHSGGLLHRDMKPSNILL---NAECHVKVADFGLSRSFVNIRRVTNNIPLSINE 175
Query: 237 PGEQF-------CEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAET 287
E F + V + +Y APE+L Y ID+WS G I+ +LCG P F +
Sbjct: 176 NTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS 235
Query: 288 EEGIAHAIIRGKIDF-------------------------------ERD----------- 305
II G IDF +RD
Sbjct: 236 TMNQLERII-GVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLK 294
Query: 306 --PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK---NDNHAPN 349
P ++EA +L+ +L NP R++ + L++P++ N N PN
Sbjct: 295 INPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPNEEPN 343
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 138/298 (46%), Gaps = 43/298 (14%)
Query: 79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHL 138
+++KY +++G G +G+ ++ + G A K+I + I +R E+ +++ L
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIR-EISLLKEL 76
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGKTILRIVK 196
HPNIV+ + + + LV E E ++ D NK + +LR V
Sbjct: 77 -HHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDE--NKTGLQDSQIKIYLYQLLRGVA 133
Query: 197 VCHENGVMHRDLKPENFLF-ADGSENSQLKAIDFGLSIFFK-PGEQFCEIVGSPYYMAPE 254
CH++ ++HRDLKP+N L +DG+ LK DFGL+ F P + V + +Y AP+
Sbjct: 134 HCHQHRILHRDLKPQNLLINSDGA----LKLADFGLARAFGIPVRSYTHEVVTLWYRAPD 189
Query: 255 VL--RRNYGPEIDVWSAGVIIYILLCGVPPF-----------------------WAETEE 289
VL + Y +D+WS G I ++ G P F W + +E
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQE 249
Query: 290 GIAHAIIRGKIDFERDPW----PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
+ R FE+ PW P +E +L+ NML +P R++ + + +P+ K+
Sbjct: 250 -LPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 132/270 (48%), Gaps = 18/270 (6%)
Query: 88 ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
ELG G FG ++ ET A K I K+E +++D E++I+ HPNIV
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVI---DTKSEEELEDYMVEIDILASC-DHPNIVKL 99
Query: 148 KEAYEDKDAIYLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
+A+ ++ +++++E C GG + ++ + TE V K L + H+N ++HR
Sbjct: 100 LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHR 159
Query: 207 DLKPENFLFA-DGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSPYYMAPEVLR------R 258
DLK N LF DG +K DFG+S + ++ +G+PY+MAPEV+ R
Sbjct: 160 DLKAGNILFTLDGD----IKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDR 215
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
Y + DVWS G+ + + PP + I + + P + S K+ +
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSSNFKDFL 274
Query: 319 KNMLDPNPYNRLTLEEVLENPWIKNDNHAP 348
K L+ N R T ++L++P++ D++ P
Sbjct: 275 KKCLEKNVDARWTTSQLLQHPFVTVDSNKP 304
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 138/298 (46%), Gaps = 43/298 (14%)
Query: 79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHL 138
+++KY +++G G +G+ ++ + G A K+I + I +R E+ +++ L
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIR-EISLLKEL 76
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGKTILRIVK 196
HPNIV+ + + + LV E E ++ D NK + +LR V
Sbjct: 77 -HHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDE--NKTGLQDSQIKIYLYQLLRGVA 133
Query: 197 VCHENGVMHRDLKPENFLF-ADGSENSQLKAIDFGLSIFFK-PGEQFCEIVGSPYYMAPE 254
CH++ ++HRDLKP+N L +DG+ LK DFGL+ F P + V + +Y AP+
Sbjct: 134 HCHQHRILHRDLKPQNLLINSDGA----LKLADFGLARAFGIPVRSYTHEVVTLWYRAPD 189
Query: 255 VL--RRNYGPEIDVWSAGVIIYILLCGVPPF-----------------------WAETEE 289
VL + Y +D+WS G I ++ G P F W + +E
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQE 249
Query: 290 GIAHAIIRGKIDFERDPW----PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
+ R FE+ PW P +E +L+ NML +P R++ + + +P+ K+
Sbjct: 250 -LPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 132/270 (48%), Gaps = 18/270 (6%)
Query: 88 ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
ELG G FG ++ ET A K I K+E +++D E++I+ HPNIV
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVI---DTKSEEELEDYMVEIDILASC-DHPNIVKL 99
Query: 148 KEAYEDKDAIYLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
+A+ ++ +++++E C GG + ++ + TE V K L + H+N ++HR
Sbjct: 100 LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHR 159
Query: 207 DLKPENFLFA-DGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSPYYMAPEVLR------R 258
DLK N LF DG +K DFG+S + ++ +G+PY+MAPEV+ R
Sbjct: 160 DLKAGNILFTLDGD----IKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDR 215
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
Y + DVWS G+ + + PP + I + + P + S K+ +
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSSNFKDFL 274
Query: 319 KNMLDPNPYNRLTLEEVLENPWIKNDNHAP 348
K L+ N R T ++L++P++ D++ P
Sbjct: 275 KKCLEKNVDARWTTSQLLQHPFVTVDSNKP 304
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 144/310 (46%), Gaps = 25/310 (8%)
Query: 50 SVSKHASNVDKKSISF----QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIET 105
SV+ A +D SI F Q + + P N +Y + LG+G FG C T
Sbjct: 154 SVAPFADYLD--SIYFNRFLQWKWLERQPVTKNTFRQY---RVLGKGGFGEVCACQVRAT 208
Query: 106 GETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCE 165
G+ YACKK+ K+++K E +I+ + +V+ AYE KDA+ LV+ L
Sbjct: 209 GKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSR-FVVSLAYAYETKDALCLVLTLMN 267
Query: 166 GGELFDRIVNKGH--YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQ 223
GG+L I + G + E A I ++ H +++RDLKPEN L D +
Sbjct: 268 GGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDD---HGH 324
Query: 224 LKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL---RRNYGPEIDVWSAGVIIYILLCGV 280
++ D GL++ G+ VG+ YMAPEV+ R + P D W+ G ++Y ++ G
Sbjct: 325 IRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSP--DWWALGCLLYEMIAGQ 382
Query: 281 PPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRL-----TLEEV 335
PF ++ + R + + + S +A+ L +L +P RL + EV
Sbjct: 383 SPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREV 442
Query: 336 LENPWIKNDN 345
E+P K N
Sbjct: 443 KEHPLFKKLN 452
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 135/294 (45%), Gaps = 43/294 (14%)
Query: 66 QLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
++ +VV+ P +G + YT K +G G FG+ +Q ++GE A KK+ + K
Sbjct: 2 KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN 61
Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGH 178
RE++IMR L H NIV + + E KD +YL + L E R+ H
Sbjct: 62 -------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--H 111
Query: 179 YTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
Y+ RA + + R + H G+ HRD+KP+N L + + LK DFG
Sbjct: 112 YS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 168
Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
+ GE + S YY APE++ +Y IDVWSAG ++ LL G P F ++
Sbjct: 169 SAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS- 227
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
G+ + K+ + +E ++ M +PN Y ++ +PW K
Sbjct: 228 -GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFAFPQIKAHPWTK 269
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 144/310 (46%), Gaps = 25/310 (8%)
Query: 50 SVSKHASNVDKKSISF----QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIET 105
SV+ A +D SI F Q + + P N +Y + LG+G FG C T
Sbjct: 154 SVAPFADYLD--SIYFNRFLQWKWLERQPVTKNTFRQY---RVLGKGGFGEVCACQVRAT 208
Query: 106 GETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCE 165
G+ YACKK+ K+++K E +I+ + +V+ AYE KDA+ LV+ L
Sbjct: 209 GKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSR-FVVSLAYAYETKDALCLVLTLMN 267
Query: 166 GGELFDRIVNKGH--YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQ 223
GG+L I + G + E A I ++ H +++RDLKPEN L D +
Sbjct: 268 GGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDD---HGH 324
Query: 224 LKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL---RRNYGPEIDVWSAGVIIYILLCGV 280
++ D GL++ G+ VG+ YMAPEV+ R + P D W+ G ++Y ++ G
Sbjct: 325 IRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSP--DWWALGCLLYEMIAGQ 382
Query: 281 PPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRL-----TLEEV 335
PF ++ + R + + + S +A+ L +L +P RL + EV
Sbjct: 383 SPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREV 442
Query: 336 LENPWIKNDN 345
E+P K N
Sbjct: 443 KEHPLFKKLN 452
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 135/294 (45%), Gaps = 43/294 (14%)
Query: 66 QLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
++ +VV+ P +G + YT K +G G FG+ +Q ++GE A KK+ + K
Sbjct: 2 KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN 61
Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGH 178
RE++IMR L H NIV + + E KD +YL + L E R+ H
Sbjct: 62 -------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--H 111
Query: 179 YTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
Y+ RA + + R + H G+ HRD+KP+N L + + LK DFG
Sbjct: 112 YS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 168
Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
+ GE + S YY APE++ +Y IDVWSAG ++ LL G P F ++
Sbjct: 169 SAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS- 227
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
G+ + K+ + +E ++ M +PN Y ++ +PW K
Sbjct: 228 -GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFKFPQIKAHPWTK 269
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 137/311 (44%), Gaps = 35/311 (11%)
Query: 69 SVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDV 128
SV + P+ +I D+Y +LG G +G ++ + T ET A K+I E + + +
Sbjct: 23 SVSAAPSATSI-DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAI 81
Query: 129 RREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVG 188
R EV +++ L +H NI+ K ++L+ E E +L + + R +
Sbjct: 82 R-EVSLLKEL-QHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFL 138
Query: 189 KTILRIVKVCHENGVMHRDLKPENFLF--ADGSENSQLKAIDFGLSIFFK-PGEQFCEIV 245
++ V CH +HRDLKP+N L +D SE LK DFGL+ F P QF +
Sbjct: 139 YQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEI 198
Query: 246 GSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFE 303
+ +Y PE+L R+Y +D+WS I +L P F ++E I +
Sbjct: 199 ITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPD 258
Query: 304 RDPWPKVS--------------KEAKELV------------KNMLDPNPYNRLTLEEVLE 337
WP V+ K K ++ ML+ +P R++ + LE
Sbjct: 259 DTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318
Query: 338 NPWIKNDNHAP 348
+P+ +++ P
Sbjct: 319 HPYFSHNDFDP 329
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 134/294 (45%), Gaps = 43/294 (14%)
Query: 66 QLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
++ +VV+ P +G + YT K +G G FG+ +Q ++GE A KK+ + K
Sbjct: 2 KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN 61
Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGH 178
RE++IMR L H NIV + + E KD +YL + L R+ H
Sbjct: 62 -------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVAR--H 111
Query: 179 YTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
Y+ RA + + R + H G+ HRD+KP+N L + + LK DFG
Sbjct: 112 YS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 168
Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
+ GE + S YY APE++ +Y IDVWSAG ++ LL G P F ++
Sbjct: 169 SAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS- 227
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
G+ + K+ + +E ++ M +PN Y ++ +PW K
Sbjct: 228 -GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFAFPQIKAHPWTK 269
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 134/285 (47%), Gaps = 29/285 (10%)
Query: 79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDID-----DVRREVE 133
++ KY G LG G +G + + ET C++ K K ++ +V++E++
Sbjct: 3 LIGKYLMGDLLGEGSYGKVKEVLDSET----LCRRAVKILKKKKLRRIPNGEANVKKEIQ 58
Query: 134 IMRHLPKHPNIVTYKEAY--EDKDAIYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGK 189
++R L +H N++ + E+K +Y+VME C G E+ D + K + A
Sbjct: 59 LLRRL-RHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEK-RFPVCQAHGYFC 116
Query: 190 TILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP--GEQFCEIV-G 246
++ ++ H G++H+D+KP N L G LK G++ P + C G
Sbjct: 117 QLIDGLEYLHSQGIVHKDIKPGNLLLTTGG---TLKISALGVAEALHPFAADDTCRTSQG 173
Query: 247 SPYYMAPEV---LRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFE 303
SP + PE+ L G ++D+WSAGV +Y + G+ PF + + I +G
Sbjct: 174 SPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIP 233
Query: 304 RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAP 348
D P +S +L+K ML+ P R ++ ++ ++ W + H P
Sbjct: 234 GDCGPPLS----DLLKGMLEYEPAKRFSIRQIRQHSWFRK-KHPP 273
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 139/305 (45%), Gaps = 41/305 (13%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAK---EKLKTEIDIDDVRREVEIMR 136
++KY +G G +G+ +C +TG A KK + +K+ +I + RE+++++
Sbjct: 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAM----REIKLLK 79
Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
L +H N+V E + K YLV E + L D + + I+ +
Sbjct: 80 QL-RHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIG 138
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEV 255
CH + ++HRD+KPEN L S++ +K DFG + PGE + + V + +Y APE+
Sbjct: 139 FCHSHNIIHRDIKPENILV---SQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPEL 195
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETE--------EGIAHAIIRGKIDFERD 305
L + YG +DVW+ G ++ + G P F +++ + + I R + F ++
Sbjct: 196 LVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKN 255
Query: 306 P-------------------WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNH 346
P +PK+S+ +L K L +P R E+L + + + D
Sbjct: 256 PVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGF 315
Query: 347 APNVS 351
A S
Sbjct: 316 AERFS 320
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 130/311 (41%), Gaps = 54/311 (17%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR-REVEIMRHLPKHPNIV 145
++LG G + ++ TG A K++ KL +E RE+ +M+ L KH NIV
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEV---KLDSEEGTPSTAIREISLMKEL-KHENIV 66
Query: 146 TYKEAYEDKDAIYLVMELCEGG---ELFDRIVNKGHYTERA-----AAAVGKTILRIVKV 197
+ ++ + LV E + + R V T R +L+ +
Sbjct: 67 RLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGN---TPRGLELNLVKYFQWQLLQGLAF 123
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEIVGSPYYMAPEVL 256
CHEN ++HRDLKP+N L ++ QLK DFGL+ F P F V + +Y AP+VL
Sbjct: 124 CHENKILHRDLKPQNLLI---NKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVL 180
Query: 257 --RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
R Y ID+WS G I+ ++ G P F +E I WP V+K
Sbjct: 181 MGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLP 240
Query: 315 K------------------------------ELVKNMLDPNPYNRLTLEEVLENPWIKND 344
K + + +L NP RL+ ++ L +PW
Sbjct: 241 KYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEY 300
Query: 345 NHAPNVSLGGN 355
H + S+GG+
Sbjct: 301 YH--HASMGGS 309
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 124/286 (43%), Gaps = 25/286 (8%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
++ D+Y G+ LG G H ++ A K + + + RRE +
Sbjct: 9 HLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 68
Query: 138 LPKHPNIVTYKEAYEDKDAI----YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILR 193
L HP IV + E + Y+VME +G L D + +G T + A V +
Sbjct: 69 L-NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 194 IVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG----EQFCEIVGSPY 249
+ H+NG++HRD+KP N + S + +K +DFG++ Q ++G+
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 250 YMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP 308
Y++PE R + DV+S G ++Y +L G PPF ++ + +A+ +R DP P
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVR------EDPIP 238
Query: 309 K------VSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAP 348
+S + +V L NP NR + ++ N P
Sbjct: 239 PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEP 284
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 123/286 (43%), Gaps = 25/286 (8%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
++ D+Y G+ LG G H ++ A K + + + RRE +
Sbjct: 9 HLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 68
Query: 138 LPKHPNIVTYKEAYEDKDAI----YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILR 193
L HP IV + E + Y+VME +G L D + +G T + A V +
Sbjct: 69 L-NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 194 IVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG----EQFCEIVGSPY 249
+ H+NG++HRD+KP N L S + +K +DFG++ Q ++G+
Sbjct: 128 ALNFSHQNGIIHRDVKPANILI---SATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQ 184
Query: 250 YMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP 308
Y++PE R + DV+S G ++Y +L G PPF ++ +A+ +R DP P
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR------EDPIP 238
Query: 309 K------VSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAP 348
+S + +V L NP NR + ++ N P
Sbjct: 239 PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEP 284
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 126/298 (42%), Gaps = 55/298 (18%)
Query: 83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
YT K +G G FG+ Q +E+ E K + ++ K RE++IMR + KHP
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKN--------RELQIMR-IVKHP 92
Query: 143 NIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI------- 191
N+V K + + KD ++L + L E R HY + I
Sbjct: 93 NVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYR--ASRHYAKLKQTMPMLLIKLYMYQL 150
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
LR + H G+ HRD+KP+N L S LK IDFG + GE + S YY
Sbjct: 151 LRSLAYIHSIGICHRDIKPQNLLLDPPS--GVLKLIDFGSAKILIAGEPNVSXICSRYYR 208
Query: 252 APEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKI--------- 300
APE++ NY ID+WS G ++ L+ G P F E+ GI + K+
Sbjct: 209 APELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGES--GIDQLVEIIKVLGTPSREQI 266
Query: 301 ------------------DFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPW 340
F + P+ +A +L+ +L+ P RLT E L +P+
Sbjct: 267 KTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPF 324
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 120/262 (45%), Gaps = 16/262 (6%)
Query: 89 LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
LG+G +GI + ++ A K+I + + + E+ + +HL KH NIV Y
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS---QPLHEEIALHKHL-KHKNIVQYL 85
Query: 149 EAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVG---KTILRIVKVCHENGVMH 205
++ + I + ME GG L + +K + +G K IL +K H+N ++H
Sbjct: 86 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 145
Query: 206 RDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE--IVGSPYYMAPEVL---RRNY 260
RD+K +N L + + LK DFG S G C G+ YMAPE++ R Y
Sbjct: 146 RDIKGDNVLI--NTYSGVLKISDFGTSKRLA-GINPCTETFTGTLQYMAPEIIDKGPRGY 202
Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
G D+WS G I + G PPF+ E E A G + +S EAK +
Sbjct: 203 GKAADIWSLGCTIIEMATGKPPFY-ELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILK 261
Query: 321 MLDPNPYNRLTLEEVLENPWIK 342
+P+P R ++L + ++K
Sbjct: 262 CFEPDPDKRACANDLLVDEFLK 283
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 71/99 (71%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
A+ L ++++ +K++F M+DTD +G +TF+ELKDGL +G ++ + ++K LM+AAD+D +
Sbjct: 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS 60
Query: 438 GLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
G + EF+ +VHL ++ ++ L AF +FDK+ SG+I
Sbjct: 61 GTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYI 99
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 120/262 (45%), Gaps = 16/262 (6%)
Query: 89 LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
LG+G +GI + ++ A K+I + + + E+ + +HL KH NIV Y
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS---QPLHEEIALHKHL-KHKNIVQYL 71
Query: 149 EAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVG---KTILRIVKVCHENGVMH 205
++ + I + ME GG L + +K + +G K IL +K H+N ++H
Sbjct: 72 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 131
Query: 206 RDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE--IVGSPYYMAPEVL---RRNY 260
RD+K +N L + + LK DFG S G C G+ YMAPE++ R Y
Sbjct: 132 RDIKGDNVLI--NTYSGVLKISDFGTSKRLA-GINPCTETFTGTLQYMAPEIIDKGPRGY 188
Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
G D+WS G I + G PPF+ E E A G + +S EAK +
Sbjct: 189 GKAADIWSLGCTIIEMATGKPPFY-ELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILK 247
Query: 321 MLDPNPYNRLTLEEVLENPWIK 342
+P+P R ++L + ++K
Sbjct: 248 CFEPDPDKRACANDLLVDEFLK 269
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 127/267 (47%), Gaps = 27/267 (10%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
++LG G +G ++ ETG+ A K++ E D+ ++ +E+ IM+ P++V
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVP-----VESDLQEIIKEISIMQQC-DSPHVVK 88
Query: 147 YKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHENGVM 204
Y +Y +++VME C G + D R+ NK TE A + ++ L+ ++ H +
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT-LTEDEIATILQSTLKGLEYLHFMRKI 147
Query: 205 HRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLRR-NYGP 262
HRD+K N L + K DFG++ + ++G+P++MAPEV++ Y
Sbjct: 148 HRDIKAGNILL---NTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNC 204
Query: 263 EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA------KE 316
D+WS G+ + G PP+ H +R +P P K +
Sbjct: 205 VADIWSLGITAIEMAEGKPPY------ADIHP-MRAIFMIPTNPPPTFRKPELWSDNFTD 257
Query: 317 LVKNMLDPNPYNRLTLEEVLENPWIKN 343
VK L +P R T ++L++P++++
Sbjct: 258 FVKQCLVKSPEQRATATQLLQHPFVRS 284
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 130/270 (48%), Gaps = 25/270 (9%)
Query: 92 GEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAY 151
G+FG ++ ET A K I K+E +++D E++I+ HPNIV +A+
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVI---DTKSEEELEDYMVEIDILASC-DHPNIVKLLDAF 76
Query: 152 EDKDAIYLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKP 210
++ +++++E C GG + ++ + TE V K L + H+N ++HRDLK
Sbjct: 77 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKA 136
Query: 211 ENFLFA-DGSENSQLKAIDFGLS-----IFFKPGEQFCEIVGSPYYMAPEVLR------R 258
N LF DG +K DFG+S + + F +G+PY+MAPEV+ R
Sbjct: 137 GNILFTLDGD----IKLADFGVSAKNTRTXIQRRDSF---IGTPYWMAPEVVMCETSKDR 189
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
Y + DVWS G+ + + PP + I + + P + S K+ +
Sbjct: 190 PYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSSNFKDFL 248
Query: 319 KNMLDPNPYNRLTLEEVLENPWIKNDNHAP 348
K L+ N R T ++L++P++ D++ P
Sbjct: 249 KKCLEKNVDARWTTSQLLQHPFVTVDSNKP 278
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 123/286 (43%), Gaps = 25/286 (8%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
++ D+Y G+ LG G H ++ A K + + + RRE +
Sbjct: 9 HLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 68
Query: 138 LPKHPNIVTYKEAYEDKDAI----YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILR 193
L HP IV + E + Y+VME +G L D + +G T + A V +
Sbjct: 69 L-NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 194 IVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG----EQFCEIVGSPY 249
+ H+NG++HRD+KP N + S + +K +DFG++ Q ++G+
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 250 YMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP 308
Y++PE R + DV+S G ++Y +L G PPF ++ +A+ +R DP P
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR------EDPIP 238
Query: 309 K------VSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAP 348
+S + +V L NP NR + ++ N P
Sbjct: 239 PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEP 284
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 123/286 (43%), Gaps = 25/286 (8%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
++ D+Y G+ LG G H ++ A K + + + RRE +
Sbjct: 9 HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 68
Query: 138 LPKHPNIVTYKEAYEDKDAI----YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILR 193
L HP IV + E + Y+VME +G L D + +G T + A V +
Sbjct: 69 L-NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 194 IVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG----EQFCEIVGSPY 249
+ H+NG++HRD+KP N + S + +K +DFG++ Q ++G+
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 250 YMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP 308
Y++PE R + DV+S G ++Y +L G PPF ++ +A+ +R DP P
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR------EDPIP 238
Query: 309 K------VSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAP 348
+S + +V L NP NR + ++ N P
Sbjct: 239 PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEP 284
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 118/267 (44%), Gaps = 25/267 (9%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
++ D+Y G+ LG G H ++ A K + + + RRE +
Sbjct: 26 HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 85
Query: 138 LPKHPNIVTYKEAYEDKDAI----YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILR 193
L HP IV + E + Y+VME +G L D + +G T + A V +
Sbjct: 86 L-NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 144
Query: 194 IVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG----EQFCEIVGSPY 249
+ H+NG++HRD+KP N + S + +K +DFG++ Q ++G+
Sbjct: 145 ALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 201
Query: 250 YMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP 308
Y++PE R + DV+S G ++Y +L G PPF ++ +A+ +R DP P
Sbjct: 202 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR------EDPIP 255
Query: 309 K------VSKEAKELVKNMLDPNPYNR 329
+S + +V L NP NR
Sbjct: 256 PSARHEGLSADLDAVVLKALAKNPENR 282
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 127/266 (47%), Gaps = 20/266 (7%)
Query: 88 ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
ELG G FG ++ ETG A K I + K+E +++D E+EI+ HP IV
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVI---ETKSEEELEDYIVEIEILATC-DHPYIVKL 81
Query: 148 KEAYEDKDAIYLVMELCEGGELFDRI---VNKGHYTERAAAAVGKTILRIVKVCHENGVM 204
AY +++++E C GG + D I +++G TE V + +L + H ++
Sbjct: 82 LGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRG-LTEPQIQVVCRQMLEALNFLHSKRII 139
Query: 205 HRDLKPENFLFADGSENSQLKAIDFGLSIF-FKPGEQFCEIVGSPYYMAPEVLR------ 257
HRDLK N L + ++ DFG+S K ++ +G+PY+MAPEV+
Sbjct: 140 HRDLKAGNVLM---TLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 196
Query: 258 RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL 317
Y + D+WS G+ + + PP + I + P K S E ++
Sbjct: 197 TPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTP-SKWSVEFRDF 255
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKN 343
+K LD NP R + ++LE+P++ +
Sbjct: 256 LKIALDKNPETRPSAAQLLEHPFVSS 281
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 127/266 (47%), Gaps = 20/266 (7%)
Query: 88 ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
ELG G FG ++ ETG A K I + K+E +++D E+EI+ HP IV
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVI---ETKSEEELEDYIVEIEILATC-DHPYIVKL 73
Query: 148 KEAYEDKDAIYLVMELCEGGELFDRI---VNKGHYTERAAAAVGKTILRIVKVCHENGVM 204
AY +++++E C GG + D I +++G TE V + +L + H ++
Sbjct: 74 LGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRG-LTEPQIQVVCRQMLEALNFLHSKRII 131
Query: 205 HRDLKPENFLFADGSENSQLKAIDFGLSIF-FKPGEQFCEIVGSPYYMAPEVLR------ 257
HRDLK N L + ++ DFG+S K ++ +G+PY+MAPEV+
Sbjct: 132 HRDLKAGNVLM---TLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 188
Query: 258 RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL 317
Y + D+WS G+ + + PP + I + P K S E ++
Sbjct: 189 TPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTP-SKWSVEFRDF 247
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKN 343
+K LD NP R + ++LE+P++ +
Sbjct: 248 LKIALDKNPETRPSAAQLLEHPFVSS 273
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 122/286 (42%), Gaps = 25/286 (8%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
++ D+Y G+ LG G H ++ A K + + + RRE +
Sbjct: 9 HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 68
Query: 138 LPKHPNIVTYKEAYEDKDAI----YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILR 193
L HP IV E + Y+VME +G L D + +G T + A V +
Sbjct: 69 L-NHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 194 IVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG----EQFCEIVGSPY 249
+ H+NG++HRD+KP N + S + +K +DFG++ Q ++G+
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 250 YMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP 308
Y++PE R + DV+S G ++Y +L G PPF ++ +A+ +R DP P
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR------EDPIP 238
Query: 309 K------VSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAP 348
+S + +V L NP NR + ++ N P
Sbjct: 239 PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEP 284
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 138/308 (44%), Gaps = 49/308 (15%)
Query: 72 SNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
S+ E D Y ++LGRG++ + I E KI K K +I +RE
Sbjct: 28 SHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEK-VVVKILKPVKKNKI-----KRE 81
Query: 132 VEIMRHLPKHPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGK 189
++I+ +L PNI+T + +D LV E + F ++ T+
Sbjct: 82 IKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMY 138
Query: 190 TILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY 249
IL+ + CH G+MHRD+KP N + E+ +L+ ID+GL+ F+ PG+++ V S Y
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY 196
Query: 250 YMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWA---ETEEGIAHAIIRG------ 298
+ PE+L + Y +D+WS G ++ ++ PF+ ++ + A + G
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 299 ---KIDFERDP-------------WPK---------VSKEAKELVKNMLDPNPYNRLTLE 333
K + E DP W + VS EA + + +L + +RLT
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 334 EVLENPWI 341
E +E+P+
Sbjct: 317 EAMEHPYF 324
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 128/301 (42%), Gaps = 50/301 (16%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD------VRREVE 133
+ KY +++G G +G + ET E A K++ +D DD RE+
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRV-------RLDDDDEGVPSSALREIC 53
Query: 134 IMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGKTI 191
+++ L KH NIV + + LV E C+ + FD G + +
Sbjct: 54 LLKEL-KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSC--NGDLDPEIVKSFLFQL 110
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEIVGSPYY 250
L+ + CH V+HRDLKP+N L + N +LK DFGL+ F P + V + +Y
Sbjct: 111 LKGLGFCHSRNVLHRDLKPQNLLI---NRNGELKLADFGLARAFGIPVRCYSAEVVTLWY 167
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAIIRGKIDFERDPW 307
P+VL + Y ID+WSAG I L P + + + I R + W
Sbjct: 168 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQW 227
Query: 308 PKVSK-------------------------EAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
P ++K ++L++N+L NP R++ EE L++P+
Sbjct: 228 PSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287
Query: 343 N 343
+
Sbjct: 288 D 288
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 128/301 (42%), Gaps = 50/301 (16%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD------VRREVE 133
+ KY +++G G +G + ET E A K++ +D DD RE+
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRV-------RLDDDDEGVPSSALREIC 53
Query: 134 IMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGKTI 191
+++ L KH NIV + + LV E C+ + FD G + +
Sbjct: 54 LLKEL-KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSC--NGDLDPEIVKSFLFQL 110
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEIVGSPYY 250
L+ + CH V+HRDLKP+N L + N +LK +FGL+ F P + V + +Y
Sbjct: 111 LKGLGFCHSRNVLHRDLKPQNLLI---NRNGELKLANFGLARAFGIPVRCYSAEVVTLWY 167
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILL-CGVPPFWAETEEGIAHAIIRGKIDFERDPW 307
P+VL + Y ID+WSAG I L G P F + I R + W
Sbjct: 168 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQW 227
Query: 308 PKVSK-------------------------EAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
P ++K ++L++N+L NP R++ EE L++P+
Sbjct: 228 PSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287
Query: 343 N 343
+
Sbjct: 288 D 288
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 93/196 (47%), Gaps = 14/196 (7%)
Query: 130 REVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGK 189
REV L H NIV+ + E+ D YLVME EG L + I + G + A
Sbjct: 60 REVHNSSQL-SHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTN 118
Query: 190 TILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE--QFCEIVGS 247
IL +K H+ ++HRD+KP+N L N LK DFG++ Q ++G+
Sbjct: 119 QILDGIKHAHDMRIVHRDIKPQNILI---DSNKTLKIFDFGIAKALSETSLTQTNHVLGT 175
Query: 248 PYYMAPEVLRRNYGPE-IDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDP 306
Y +PE + E D++S G+++Y +L G PPF ET IA I +D
Sbjct: 176 VQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIA-------IKHIQDS 228
Query: 307 WPKVSKEAKELVKNML 322
P V+ + ++ + L
Sbjct: 229 VPNVTTDVRKDIPQSL 244
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKSQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+S+LK +DFGL ++ V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDSELKILDFGLC--RHTDDEMTGYVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 85
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 86 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 143
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+S+LK +DFGL+ ++ V + +Y APE
Sbjct: 144 LKYIHSADIIHRDLKPSNLAV---NEDSELKILDFGLA--RHTDDEMTGYVATRWYRAPE 198
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 81
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 82 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 139
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+S+LK +DFGL+ ++ V + +Y APE
Sbjct: 140 LKYIHSADIIHRDLKPSNLAV---NEDSELKILDFGLA--RHTDDEMTGYVATRWYRAPE 194
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 135/332 (40%), Gaps = 78/332 (23%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR---REVEIMR 136
+D++ + G+G FG E TG + A KK+ I D R RE++IM+
Sbjct: 22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV----------IQDPRFRNRELQIMQ 71
Query: 137 HLP--KHPNIVTYKEAY-----EDKDAIYLVMELCEGGELFDRIVNKGHYTERAAA---- 185
L HPNIV + + D+ IYL + + + R + +Y + A
Sbjct: 72 DLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCC-RNYYRRQVAPPPIL 130
Query: 186 ----------AVGKTILRIVKVCHENGVMHRDLKPENFLF--ADGSENSQLKAIDFGLSI 233
++G L V VCH RD+KP N L ADG+ LK DFG +
Sbjct: 131 IKVFLFQLIRSIGCLHLPSVNVCH------RDIKPHNVLVNEADGT----LKLCDFGSAK 180
Query: 234 FFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGI 291
P E + S YY APE++ ++Y +D+WS G I ++ G P F + G
Sbjct: 181 KLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQ 240
Query: 292 AHAIIR-----------------GKIDFERD---PWPKV--------SKEAKELVKNMLD 323
H I+R +D PW V +KEA +L+ +L
Sbjct: 241 LHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQ 300
Query: 324 PNPYNRLTLEEVLENPWIKNDNHAPNVSLGGN 355
P R+ E L +P+ ++ H P L N
Sbjct: 301 YLPEERMKPYEALCHPYF-DELHDPATKLPNN 331
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMAGFVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMAGFVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 121/250 (48%), Gaps = 22/250 (8%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
K +GRG FG T YA K + K ++ + R E +++ + I
Sbjct: 96 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVN-GDCQWITA 154
Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRI--VNKGHYTERAAAAVGKTILRIVKVCHENGVM 204
A++D++ +YLVM+ GG+L + + A +G+ +L I + H+ +
Sbjct: 155 LHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSI-HQLHYV 213
Query: 205 HRDLKPENFLFADGSENSQLKAIDFG--LSIFFKPGEQFCEIVGSPYYMAPEVLRR---- 258
HRD+KP+N L N ++ DFG L + Q VG+P Y++PE+L+
Sbjct: 214 HRDIKPDNVLL---DVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDG 270
Query: 259 --NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK----VSK 312
YGPE D WS GV +Y +L G PF+AE+ I+ + ER +P VS+
Sbjct: 271 MGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHE---ERFQFPSHVTDVSE 327
Query: 313 EAKELVKNML 322
EAK+L++ ++
Sbjct: 328 EAKDLIQRLI 337
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 127/269 (47%), Gaps = 21/269 (7%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLP 139
+ T + +G G FG ++ F I G+ A K A+ +I I++VR+E ++ L
Sbjct: 8 ELTLEEIIGIGGFGKVYRAFWI--GDEVAVKA-ARHDPDEDISQTIENVRQEAKLFAML- 63
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
KHPNI+ + + + LVME GG L +R+++ I R + H
Sbjct: 64 KHPNIIALRGVCLKEPNLCLVMEFARGGPL-NRVLSGKRIPPDILVNWAVQIARGMNYLH 122
Query: 200 ENGV---MHRDLKPENFLFADGSENSQL-----KAIDFGLSIFFKPGEQFCEIVGSPYYM 251
+ + +HRDLK N L EN L K DFGL+ + + G+ +M
Sbjct: 123 DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA-AGAYAWM 181
Query: 252 APEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
APEV+R + + DVWS GV+++ LL G PF +A+ + K+ P P
Sbjct: 182 APEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLAL---PIPST 238
Query: 311 SKEA-KELVKNMLDPNPYNRLTLEEVLEN 338
E +L+++ +P+P++R + +L+
Sbjct: 239 CPEPFAKLMEDCWNPDPHSRPSFTNILDQ 267
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 75
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 76 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCAKLTDDHVQFLIYQILRG 133
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 134 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 188
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKXQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDXELKILDFGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 75
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 76 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 133
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 134 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMAGFVATRWYRAPE 188
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 121/250 (48%), Gaps = 22/250 (8%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
K +GRG FG T YA K + K ++ + R E +++ + I
Sbjct: 80 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVN-GDCQWITA 138
Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRI--VNKGHYTERAAAAVGKTILRIVKVCHENGVM 204
A++D++ +YLVM+ GG+L + + A +G+ +L I + H+ +
Sbjct: 139 LHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSI-HQLHYV 197
Query: 205 HRDLKPENFLFADGSENSQLKAIDFG--LSIFFKPGEQFCEIVGSPYYMAPEVLRR---- 258
HRD+KP+N L N ++ DFG L + Q VG+P Y++PE+L+
Sbjct: 198 HRDIKPDNVLL---DVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDG 254
Query: 259 --NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK----VSK 312
YGPE D WS GV +Y +L G PF+AE+ I+ + ER +P VS+
Sbjct: 255 MGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHE---ERFQFPSHVTDVSE 311
Query: 313 EAKELVKNML 322
EAK+L++ ++
Sbjct: 312 EAKDLIQRLI 321
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKXQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 99
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G + IV T+ + ILR
Sbjct: 100 HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 158 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 212
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 98
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G + IV T+ + ILR
Sbjct: 99 HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 156
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 157 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 211
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 212 IMLNWMHYNQTVDIWSVGCIMAELLTG 238
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 32 ERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 89
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 90 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 147
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 148 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 202
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 203 IMLNWMHYNQTVDIWSVGCIMAELLTG 229
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 86
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 87 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 144
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 145 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTADEMTGYVATRWYRAPE 199
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 103/207 (49%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK++K ++ I RE+ +++H+ K
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSK-PFQSIIHAKRTYRELRLLKHM-K 91
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G + IV T+ + ILR
Sbjct: 92 HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 149
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 150 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 204
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 85
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 86 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 143
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 144 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 198
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 86
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 87 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 144
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 145 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTADEMTGYVATRWYRAPE 199
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 119/262 (45%), Gaps = 30/262 (11%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
+ KY ++G+G FG + +TG+ A KK+ E K I +R E++I++ L
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLL- 74
Query: 140 KHPNIVTYKEAYEDK--------DAIYLVMELCE---GGELFDRIVNKGHYTERAAAAVG 188
KH N+V E K +IYLV + CE G L + +V +T V
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK---FTLSEIKRVM 131
Query: 189 KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-----QFCE 243
+ +L + H N ++HRD+K N L + + LK DFGL+ F + ++
Sbjct: 132 QMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 244 IVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID 301
V + +Y PE+L R+YGP ID+W AG I+ + P TE+ I +
Sbjct: 189 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGS 248
Query: 302 FERDPWPKVSK----EAKELVK 319
+ WP V E ELVK
Sbjct: 249 ITPEVWPNVDNYELYEKLELVK 270
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 86
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 87 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 144
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 145 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTADEMTGYVATRWYRAPE 199
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 75
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 76 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 133
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 134 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 188
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 27 ERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 84
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 85 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 142
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 143 LKYIHSADIIHRDLKPSNLAV---NEDXELKILDFGLA--RHTDDEMTGYVATRWYRAPE 197
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 99
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G + IV T+ + ILR
Sbjct: 100 HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 158 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMXGXVATRWYRAPE 212
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 109/241 (45%), Gaps = 37/241 (15%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKL--KTEIDIDDVRREVEIMRHL- 138
KY+ GK LG G FGI + F+IE+G+ +A KK+ ++ E+DI V V I++ +
Sbjct: 8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVD 67
Query: 139 ---------PKHP------NIVTYKEAYEDKDAIYLVMELCEGGEL---FDRIVNKGHYT 180
PK P N + K + +++ + L + + + H
Sbjct: 68 YFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKV 127
Query: 181 ERAAAAVGKTI------------LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAID 228
++ G++I R V H G+ HRD+KP+N L S+++ LK D
Sbjct: 128 LKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLV--NSKDNTLKLCD 185
Query: 229 FGLSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAE 286
FG + P E + S +Y APE++ Y P ID+WS G + L+ G P F E
Sbjct: 186 FGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGE 245
Query: 287 T 287
T
Sbjct: 246 T 246
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 90
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G + IV T+ + ILR
Sbjct: 91 HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 148
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 149 LKYIHSADIIHRDLKPSNLAV---NEDXELKILDFGLA--RHTDDEMTGYVATRWYRAPE 203
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 204 IMLNWMHYNQTVDIWSVGCIMAELLTG 230
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 121/255 (47%), Gaps = 32/255 (12%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
K +GRG FG + +A K + K ++ + R E +++ + I T
Sbjct: 80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN-GDSKWITT 138
Query: 147 YKEAYEDKDAIYLVMELCEGGELF-------DRIVNKGHYTERAAAAVGKTILRIVKVCH 199
A++D + +YLVM+ GG+L DR+ E A + + ++ I V H
Sbjct: 139 LHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPE-----EMARFYLAEMVIAIDSV-H 192
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFG--LSIFFKPGEQFCEIVGSPYYMAPEVLR 257
+ +HRD+KP+N L N ++ DFG L + Q VG+P Y++PE+L+
Sbjct: 193 QLHYVHRDIKPDNILM---DMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQ 249
Query: 258 R------NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-- 309
YGPE D WS GV +Y +L G PF+AE+ I+ K ER +P
Sbjct: 250 AMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHK---ERFQFPTQV 306
Query: 310 --VSKEAKELVKNML 322
VS+ AK+L++ ++
Sbjct: 307 TDVSENAKDLIRRLI 321
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 129/274 (47%), Gaps = 16/274 (5%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
++ ++ + +GRG FG + C + +TG+ YA K + K+++K + + + IM L
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK-QGETLALNERIMLSLV 246
Query: 140 KH---PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
P IV A+ D + +++L GG+L + G ++E I+ ++
Sbjct: 247 STGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE 306
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
H V++RDLKP N L E+ ++ D GL+ F + VG+ YMAPEVL
Sbjct: 307 HMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVL 362
Query: 257 RRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
++ Y D +S G +++ LL G PF + H I R + + S E
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-KHEIDRMTLTMAVELPDSFSPEL 421
Query: 315 KELVKNMLDPNPYNRLTL-----EEVLENPWIKN 343
+ L++ +L + RL +EV E+P+ ++
Sbjct: 422 RSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 455
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 84
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 85 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 142
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 143 LKYIHSADIIHRDLKPSNLAV---NEDXELKILDFGLA--RHTDDEMTGYVATRWYRAPE 197
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 129/274 (47%), Gaps = 16/274 (5%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
++ ++ + +GRG FG + C + +TG+ YA K + K+++K + + + IM L
Sbjct: 187 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK-QGETLALNERIMLSLV 245
Query: 140 KH---PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
P IV A+ D + +++L GG+L + G ++E I+ ++
Sbjct: 246 STGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE 305
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
H V++RDLKP N L E+ ++ D GL+ F + VG+ YMAPEVL
Sbjct: 306 HMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVL 361
Query: 257 RRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
++ Y D +S G +++ LL G PF + H I R + + S E
Sbjct: 362 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-KHEIDRMTLTMAVELPDSFSPEL 420
Query: 315 KELVKNMLDPNPYNRLTL-----EEVLENPWIKN 343
+ L++ +L + RL +EV E+P+ ++
Sbjct: 421 RSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 454
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 90
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 91 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 148
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 149 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 203
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 204 IMLNWMHYNQTVDIWSVGCIMAELLTG 230
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 91
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 92 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 149
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 150 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 204
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 91
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 92 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 149
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 150 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 204
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 119/262 (45%), Gaps = 30/262 (11%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
+ KY ++G+G FG + +TG+ A KK+ E K I +R E++I++ L
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLL- 74
Query: 140 KHPNIVTYKEAYEDK--------DAIYLVMELCE---GGELFDRIVNKGHYTERAAAAVG 188
KH N+V E K +IYLV + CE G L + +V +T V
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK---FTLSEIKRVM 131
Query: 189 KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-----QFCE 243
+ +L + H N ++HRD+K N L + + LK DFGL+ F + ++
Sbjct: 132 QMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 244 IVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID 301
V + +Y PE+L R+YGP ID+W AG I+ + P TE+ I +
Sbjct: 189 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGS 248
Query: 302 FERDPWPKVSK----EAKELVK 319
+ WP V E ELVK
Sbjct: 249 ITPEVWPNVDNYELYEKLELVK 270
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 81
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 82 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 139
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 140 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 194
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 193 IMLNAMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 119/262 (45%), Gaps = 30/262 (11%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
+ KY ++G+G FG + +TG+ A KK+ E K I +R E++I++ L
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLL- 73
Query: 140 KHPNIVTYKEAYEDK--------DAIYLVMELCE---GGELFDRIVNKGHYTERAAAAVG 188
KH N+V E K +IYLV + CE G L + +V +T V
Sbjct: 74 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK---FTLSEIKRVM 130
Query: 189 KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-----QFCE 243
+ +L + H N ++HRD+K N L + + LK DFGL+ F + ++
Sbjct: 131 QMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAKNSQPNRYXN 187
Query: 244 IVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID 301
V + +Y PE+L R+YGP ID+W AG I+ + P TE+ I +
Sbjct: 188 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGS 247
Query: 302 FERDPWPKVSK----EAKELVK 319
+ WP V E ELVK
Sbjct: 248 ITPEVWPNVDNYELYEKLELVK 269
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 84
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 85 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 142
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 143 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 197
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 86
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 87 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 144
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 145 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 199
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 84
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 85 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 142
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 143 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 197
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 21 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 78
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 79 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 136
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 137 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 191
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 192 IMLNWMHYNQTVDIWSVGCIMAELLTG 218
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGXVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 101/201 (50%), Gaps = 17/201 (8%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIV- 145
+ +G G +G ++ + A KK+++ ++ I RE+ +++HL KH N++
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSR-PFQSLIHARRTYRELRLLKHL-KHENVIG 91
Query: 146 -----TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
T + ED +YLV L G + IV ++ + +LR +K H
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHS 149
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRR-- 258
G++HRDLKP N +E+S+L+ +DFGL+ + E+ V + +Y APE++
Sbjct: 150 AGIIHRDLKPSNVAV---NEDSELRILDFGLA--RQADEEMTGYVATRWYRAPEIMLNWM 204
Query: 259 NYGPEIDVWSAGVIIYILLCG 279
+Y +D+WS G I+ LL G
Sbjct: 205 HYNQTVDIWSVGCIMAELLQG 225
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 119/262 (45%), Gaps = 30/262 (11%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
+ KY ++G+G FG + +TG+ A KK+ E K I +R E++I++ L
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLL- 74
Query: 140 KHPNIVTYKEAYEDKDA--------IYLVMELCE---GGELFDRIVNKGHYTERAAAAVG 188
KH N+V E K + IYLV + CE G L + +V +T V
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK---FTLSEIKRVM 131
Query: 189 KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-----QFCE 243
+ +L + H N ++HRD+K N L + + LK DFGL+ F + ++
Sbjct: 132 QMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 244 IVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID 301
V + +Y PE+L R+YGP ID+W AG I+ + P TE+ I +
Sbjct: 189 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGS 248
Query: 302 FERDPWPKVSK----EAKELVK 319
+ WP V E ELVK
Sbjct: 249 ITPEVWPNVDNYELYEKLELVK 270
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 81
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 82 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 139
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 140 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 194
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 81
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 82 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 139
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 140 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 194
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 85
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 86 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 143
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 144 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 198
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 98
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G + IV T+ + ILR
Sbjct: 99 HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 156
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 157 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 211
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 212 IMLNWMHYNQTVDIWSVGCIMAELLTG 238
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 102
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G + IV T+ + ILR
Sbjct: 103 HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 160
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 161 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 215
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 216 IMLNWMHYNQTVDIWSVGCIMAELLTG 242
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 99
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G + IV T+ + ILR
Sbjct: 100 HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 158 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 212
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 133/302 (44%), Gaps = 44/302 (14%)
Query: 77 GNILDKYTFGK--ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREV 132
G ++D F K ++G G +G+ ++ TGE A KKI +L TE + RE+
Sbjct: 1 GPLVDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREI 57
Query: 133 EIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL 192
+++ L HPNIV + ++ +YLV E + + ++ T + +
Sbjct: 58 SLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLF 114
Query: 193 RIVK---VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSP 248
++++ CH + V+HRDLKP+N L + +K DFGL+ F P + V +
Sbjct: 115 QLLQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTL 171
Query: 249 YYMAPEVLR--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDP 306
+Y APE+L + Y +D+WS G I ++ F ++E I R +
Sbjct: 172 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 231
Query: 307 WPKVS-------------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
WP V+ ++ + L+ ML +P R++ + L +P+
Sbjct: 232 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 291
Query: 342 KN 343
++
Sbjct: 292 QD 293
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 129/274 (47%), Gaps = 16/274 (5%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
++ ++ + +GRG FG + C + +TG+ YA K + K+++K + + + IM L
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK-QGETLALNERIMLSLV 246
Query: 140 KH---PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
P IV A+ D + +++L GG+L + G ++E I+ ++
Sbjct: 247 STGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE 306
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
H V++RDLKP N L E+ ++ D GL+ F + VG+ YMAPEVL
Sbjct: 307 HMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVL 362
Query: 257 RRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
++ Y D +S G +++ LL G PF + H I R + + S E
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-KHEIDRMTLTMAVELPDSFSPEL 421
Query: 315 KELVKNMLDPNPYNRLTL-----EEVLENPWIKN 343
+ L++ +L + RL +EV E+P+ ++
Sbjct: 422 RSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 455
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 129/274 (47%), Gaps = 16/274 (5%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
++ ++ + +GRG FG + C + +TG+ YA K + K+++K + + + IM L
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK-QGETLALNERIMLSLV 246
Query: 140 KH---PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
P IV A+ D + +++L GG+L + G ++E I+ ++
Sbjct: 247 STGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE 306
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
H V++RDLKP N L E+ ++ D GL+ F + VG+ YMAPEVL
Sbjct: 307 HMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVL 362
Query: 257 RRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
++ Y D +S G +++ LL G PF + H I R + + S E
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-KHEIDRMTLTMAVELPDSFSPEL 421
Query: 315 KELVKNMLDPNPYNRLTL-----EEVLENPWIKN 343
+ L++ +L + RL +EV E+P+ ++
Sbjct: 422 RSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 455
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 20 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 77
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 78 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 135
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 136 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 190
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 191 IMLNWMHYNQTVDIWSVGCIMAELLTG 217
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 85
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 86 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 143
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 144 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 198
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 102
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 103 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 160
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 161 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMXGYVATRWYRAPE 215
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 216 IMLNWMHYNQTVDIWSVGCIMAELLTG 242
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 76
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 77 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 134
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 135 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 189
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 190 IMLNWMHYNQTVDIWSVGCIMAELLTG 216
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 75
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 76 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 133
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 134 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 188
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 99/203 (48%), Gaps = 19/203 (9%)
Query: 89 LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD-----VRREVEIMRHLPKHPN 143
LG G+F ++ + T + A KKI KL + D RE+++++ L HPN
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKI---KLGHRSEAKDGINRTALREIKLLQEL-SHPN 73
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRIV--NKGHYTERAAAAVGKTILRIVKVCHEN 201
I+ +A+ K I LV + E + I+ N T A L+ ++ H++
Sbjct: 74 IIGLLDAFGHKSNISLVFDFMETD--LEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH 131
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVL--RR 258
++HRDLKP N L EN LK DFGL+ F P + V + +Y APE+L R
Sbjct: 132 WILHRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGAR 188
Query: 259 NYGPEIDVWSAGVIIYILLCGVP 281
YG +D+W+ G I+ LL VP
Sbjct: 189 MYGVGVDMWAVGCILAELLLRVP 211
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 76
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 77 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 134
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y APE
Sbjct: 135 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 189
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 190 IMLNWMHYNQTVDIWSVGCIMAELLTG 216
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 131/309 (42%), Gaps = 49/309 (15%)
Query: 75 AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
G + D +YT +G G +G+ ++ A KKI+ + +T RE
Sbjct: 34 VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ--RTLRE 91
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
++I+ +H NI+ + E +YLV L G +L+ +++ H +
Sbjct: 92 IKILLRF-RHENIIGINDIIRAPTIEQMKDVYLVTHLM-GADLY-KLLKTQHLSNDHICY 148
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
ILR +K H V+HRDLKP N L + LK DFGL+ P
Sbjct: 149 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTXDLKICDFGLARVADPDHDHTGFLT 205
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAI-IRG 298
E V + +Y APE++ + Y ID+WS G I+ +L P F + + + H + I G
Sbjct: 206 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 265
Query: 299 KIDFE---------------------RDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
E + PW P +A +L+ ML NP+ R+ +E
Sbjct: 266 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 325
Query: 334 EVLENPWIK 342
+ L +P+++
Sbjct: 326 QALAHPYLE 334
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 128/290 (44%), Gaps = 42/290 (14%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
+++G G +G+ ++ TGE A KKI +L TE + RE+ +++ L HPNI
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 65
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
V + ++ +YLV E + + ++ T + + ++++ CH +
Sbjct: 66 VKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
V+HRDLKPEN L + +K DFGL+ F P + V + +Y APE+L +
Sbjct: 124 RVLHRDLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
Y +D+WS G I ++ F ++E I R + WP V+
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
++ + L+ ML +P R++ + L +P+ ++
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 129/295 (43%), Gaps = 48/295 (16%)
Query: 77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMR 136
G L + + LGRG FG+ + YA K+I E+ + V REV+ +
Sbjct: 1 GRYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALA 58
Query: 137 HLPKHPNIVTYKEAYEDKDA------------IYLVMELCEGGELFDRIVNKGHYTERAA 184
L +HP IV Y A+ +K+ +Y+ M+LC L D + + ER
Sbjct: 59 KL-EHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERER 117
Query: 185 AAVGKTILRI---VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQF 241
+ L+I V+ H G+MHRDLKP N F + + +K DFGL E+
Sbjct: 118 SVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFF---TMDDVVKVGDFGLVTAMDQDEEE 174
Query: 242 CEI-------------VGSPYYMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAET 287
+ VG+ YM+PE + N Y ++D++S G+I++ LL PF +
Sbjct: 175 QTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM 231
Query: 288 EEGIAHAIIRGKIDFERDPWPKVSKEAKE----LVKNMLDPNPYNRLTLEEVLEN 338
E +R D +P + + +V++ML P+P R ++EN
Sbjct: 232 ER------VRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 132/308 (42%), Gaps = 49/308 (15%)
Query: 75 AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
G + D +YT +G G +G+ ++ A KKI+ + +T RE
Sbjct: 16 VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ--RTLRE 73
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
++I+ +H NI+ + E +Y+V +L E +L+ +++ H +
Sbjct: 74 IKILLAF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 130
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
ILR +K H V+HRDLKP N L + S LK DFGL+ P
Sbjct: 131 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTSDLKICDFGLARVADPDHDHTGFLT 187
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPF----------------W 284
E V + +Y APE++ + Y ID+WS G I+ +L P F
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 247
Query: 285 AETEEGIAHAIIRGKIDF-------ERDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
+ ++E + I ++ + PW P +A +L+ ML NP+ R+ +E
Sbjct: 248 SPSQEDLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 307
Query: 334 EVLENPWI 341
+ L +P++
Sbjct: 308 QALAHPYL 315
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 128/290 (44%), Gaps = 42/290 (14%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
+++G G +G+ ++ TGE A KKI +L TE + RE+ +++ L HPNI
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 66
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
V + ++ +YLV E + + ++ T + + ++++ CH +
Sbjct: 67 VKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
V+HRDLKPEN L + +K DFGL+ F P + V + +Y APE+L +
Sbjct: 125 RVLHRDLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
Y +D+WS G I ++ F ++E I R + WP V+
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 241
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
++ + L+ ML +P R++ + L +P+ ++
Sbjct: 242 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 127/290 (43%), Gaps = 42/290 (14%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
+++G G +G+ ++ TGE A KKI +L TE + RE+ +++ L HPNI
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 65
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
V + ++ +YLV E + ++ T + + ++++ CH +
Sbjct: 66 VKLLDVIHTENKLYLVFEFLSMD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
V+HRDLKPEN L + +K DFGL+ F P + V + +Y APE+L +
Sbjct: 124 RVLHRDLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
Y +D+WS G I ++ F ++E I R + WP V+
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
++ + L+ ML +P R++ + L +P+ ++
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 128/290 (44%), Gaps = 42/290 (14%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
+++G G +G+ ++ TGE A KKI +L TE + RE+ +++ L HPNI
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 71
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
V + ++ +YLV E + + ++ T + + ++++ CH +
Sbjct: 72 VKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVL--RR 258
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L +
Sbjct: 130 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXK 186
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
Y +D+WS G I ++ F ++E I R + WP V+
Sbjct: 187 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 246
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
++ + L+ ML +P R++ + L +P+ ++
Sbjct: 247 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 296
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +D+GL+ ++ V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDYGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 42/290 (14%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
+++G G +G+ ++ TGE A KKI +L TE + RE+ +++ L HPNI
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 64
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
V + ++ +YLV E + ++ T + + ++++ CH +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVL--RR 258
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L +
Sbjct: 123 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXK 179
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
Y +D+WS G I ++ F ++E I R + WP V+
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
++ + L+ ML +P R++ + L +P+ ++
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 42/290 (14%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
+++G G +G+ ++ TGE A KKI +L TE + RE+ +++ L HPNI
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 64
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
V + ++ +YLV E + ++ T + + ++++ CH +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSH 122
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L +
Sbjct: 123 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
Y +D+WS G I ++ F ++E I R + WP V+
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
++ + L+ ML +P R++ + L +P+ ++
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 127/290 (43%), Gaps = 42/290 (14%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
+++G G +G+ ++ TGE A KKI +L TE + RE+ +++ L HPNI
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 67
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
V + ++ +YLV E + ++ T + + ++++ CH +
Sbjct: 68 VKLLDVIHTENKLYLVFEFLSMD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
V+HRDLKPEN L + +K DFGL+ F P + V + +Y APE+L +
Sbjct: 126 RVLHRDLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
Y +D+WS G I ++ F ++E I R + WP V+
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
++ + L+ ML +P R++ + L +P+ ++
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 42/290 (14%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
+++G G +G+ ++ TGE A KKI +L TE + RE+ +++ L HPNI
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 64
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
V + ++ +YLV E + ++ T + + ++++ CH +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L +
Sbjct: 123 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
Y +D+WS G I ++ F ++E I R + WP V+
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
++ + L+ ML +P R++ + L +P+ ++
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 42/290 (14%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
+++G G +G+ ++ TGE A KKI +L TE + RE+ +++ L HPNI
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 63
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
V + ++ +YLV E + ++ T + + ++++ CH +
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L +
Sbjct: 122 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
Y +D+WS G I ++ F ++E I R + WP V+
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
++ + L+ ML +P R++ + L +P+ ++
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 101/201 (50%), Gaps = 17/201 (8%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIV- 145
+ +G G +G ++ + A KK+++ ++ I RE+ +++HL KH N++
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSR-PFQSLIHARRTYRELRLLKHL-KHENVIG 91
Query: 146 -----TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
T + ED +YLV L G + IV ++ + +LR +K H
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS 149
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRR-- 258
G++HRDLKP N +E+S+L+ +DFGL+ + E+ V + +Y APE++
Sbjct: 150 AGIIHRDLKPSNVAV---NEDSELRILDFGLA--RQADEEMTGYVATRWYRAPEIMLNWM 204
Query: 259 NYGPEIDVWSAGVIIYILLCG 279
+Y +D+WS G I+ LL G
Sbjct: 205 HYNQTVDIWSVGCIMAELLQG 225
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 128/290 (44%), Gaps = 42/290 (14%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
+++G G +G+ ++ TGE A KKI +L TE + RE+ +++ L HPNI
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 64
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
V + ++ +YLV E + + ++ T + + ++++ CH +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L +
Sbjct: 123 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
Y +D+WS G I ++ F ++E I R + WP V+
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
++ + L+ ML +P R++ + L +P+ ++
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 128/290 (44%), Gaps = 42/290 (14%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
+++G G +G+ ++ TGE A KKI +L TE + RE+ +++ L HPNI
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 65
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
V + ++ +YLV E + + ++ T + + ++++ CH +
Sbjct: 66 VKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L +
Sbjct: 124 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 180
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
Y +D+WS G I ++ F ++E I R + WP V+
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
++ + L+ ML +P R++ + L +P+ ++
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 125/253 (49%), Gaps = 12/253 (4%)
Query: 89 LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
LGRG FG C TG+ YACKK+ K++LK E +I+ + IV+
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSR-FIVSLA 251
Query: 149 EAYEDKDAIYLVMELCEGGELFDRIVNKGH----YTERAAAAVGKTILRIVKVCHENGVM 204
A+E K + LVM + GG++ I N + E A I+ ++ H+ ++
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNII 311
Query: 205 HRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE-IVGSPYYMAPEVLR-RNYGP 262
+RDLKPEN L D + ++ D GL++ K G+ + G+P +MAPE+L Y
Sbjct: 312 YRDLKPENVLLDD---DGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF 368
Query: 263 EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP-KVSKEAKELVKNM 321
+D ++ GV +Y ++ PF A E+ + + ++ ++ + +P K S +K+ + +
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRVLEQAVTYPDKFSPASKDFCEAL 427
Query: 322 LDPNPYNRLTLEE 334
L +P RL +
Sbjct: 428 LQKDPEKRLGFRD 440
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 42/290 (14%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
+++G G +G+ ++ TGE A KKI +L TE + RE+ +++ L HPNI
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 63
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
V + ++ +YLV E + ++ T + + ++++ CH +
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L +
Sbjct: 122 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
Y +D+WS G I ++ F ++E I R + WP V+
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
++ + L+ ML +P R++ + L +P+ ++
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 128/290 (44%), Gaps = 42/290 (14%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
+++G G +G+ ++ TGE A KKI +L TE + RE+ +++ L HPNI
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 64
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
V + ++ +YLV E + + ++ T + + ++++ CH +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L +
Sbjct: 123 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
Y +D+WS G I ++ F ++E I R + WP V+
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
++ + L+ ML +P R++ + L +P+ ++
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 125/253 (49%), Gaps = 12/253 (4%)
Query: 89 LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
LGRG FG C TG+ YACKK+ K++LK E +I+ + IV+
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSR-FIVSLA 251
Query: 149 EAYEDKDAIYLVMELCEGGELFDRIVNKGH----YTERAAAAVGKTILRIVKVCHENGVM 204
A+E K + LVM + GG++ I N + E A I+ ++ H+ ++
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNII 311
Query: 205 HRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE-IVGSPYYMAPEVLR-RNYGP 262
+RDLKPEN L D + ++ D GL++ K G+ + G+P +MAPE+L Y
Sbjct: 312 YRDLKPENVLLDD---DGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF 368
Query: 263 EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP-KVSKEAKELVKNM 321
+D ++ GV +Y ++ PF A E+ + + ++ ++ + +P K S +K+ + +
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRVLEQAVTYPDKFSPASKDFCEAL 427
Query: 322 LDPNPYNRLTLEE 334
L +P RL +
Sbjct: 428 LQKDPEKRLGFRD 440
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 128/290 (44%), Gaps = 42/290 (14%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
+++G G +G+ ++ TGE A KKI +L TE + RE+ +++ L HPNI
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 71
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
V + ++ +YLV E + + ++ T + + ++++ CH +
Sbjct: 72 VKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L +
Sbjct: 130 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 186
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
Y +D+WS G I ++ F ++E I R + WP V+
Sbjct: 187 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 246
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
++ + L+ ML +P R++ + L +P+ ++
Sbjct: 247 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 296
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 125/253 (49%), Gaps = 12/253 (4%)
Query: 89 LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
LGRG FG C TG+ YACKK+ K++LK E +I+ + IV+
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSR-FIVSLA 251
Query: 149 EAYEDKDAIYLVMELCEGGELFDRIVNKGH----YTERAAAAVGKTILRIVKVCHENGVM 204
A+E K + LVM + GG++ I N + E A I+ ++ H+ ++
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNII 311
Query: 205 HRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE-IVGSPYYMAPEVLR-RNYGP 262
+RDLKPEN L D + ++ D GL++ K G+ + G+P +MAPE+L Y
Sbjct: 312 YRDLKPENVLLDD---DGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF 368
Query: 263 EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP-KVSKEAKELVKNM 321
+D ++ GV +Y ++ PF A E+ + + ++ ++ + +P K S +K+ + +
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRVLEQAVTYPDKFSPASKDFCEAL 427
Query: 322 LDPNPYNRLTLEE 334
L +P RL +
Sbjct: 428 LQKDPEKRLGFRD 440
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 128/290 (44%), Gaps = 42/290 (14%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
+++G G +G+ ++ TGE A KKI +L TE + RE+ +++ L HPNI
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 65
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
V + ++ +YLV E + + ++ T + + ++++ CH +
Sbjct: 66 VKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L +
Sbjct: 124 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
Y +D+WS G I ++ F ++E I R + WP V+
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
++ + L+ ML +P R++ + L +P+ ++
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 107/209 (51%), Gaps = 17/209 (8%)
Query: 79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHL 138
+ ++Y +G G +G +++++G A KK+++ ++ I RE+ +++H+
Sbjct: 49 VPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSR-PFQSIIHAKRTYRELRLLKHM 107
Query: 139 PKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL 192
KH N++ T + E+ + +YLV L G +L + IV T+ + IL
Sbjct: 108 -KHENVIGLLDVFTPATSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQIL 164
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMA 252
R +K H ++HRDLKP N +E+ +LK +DFGL+ ++ V + +Y A
Sbjct: 165 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRA 219
Query: 253 PEVLRR--NYGPEIDVWSAGVIIYILLCG 279
PE++ +Y +D+WS G I+ LL G
Sbjct: 220 PEIMLNWMHYNMTVDIWSVGCIMAELLTG 248
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 42/290 (14%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
+++G G +G+ ++ TGE A KKI +L TE + RE+ +++ L HPNI
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 64
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
V + ++ +YLV E + ++ T + + ++++ CH +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L +
Sbjct: 123 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
Y +D+WS G I ++ F ++E I R + WP V+
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
++ + L+ ML +P R++ + L +P+ ++
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 42/290 (14%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
+++G G +G+ ++ TGE A KKI +L TE + RE+ +++ L HPNI
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 63
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
V + ++ +YLV E + ++ T + + ++++ CH +
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L +
Sbjct: 122 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 178
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
Y +D+WS G I ++ F ++E I R + WP V+
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
++ + L+ ML +P R++ + L +P+ ++
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 42/290 (14%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
+++G G +G+ ++ TGE A KKI +L TE + RE+ +++ L HPNI
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 63
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
V + ++ +YLV E + ++ T + + ++++ CH +
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L +
Sbjct: 122 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 178
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
Y +D+WS G I ++ F ++E I R + WP V+
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
++ + L+ ML +P R++ + L +P+ ++
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 128/290 (44%), Gaps = 42/290 (14%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
+++G G +G+ ++ TGE A KKI +L TE + RE+ +++ L HPNI
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 67
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
V + ++ +YLV E + + ++ T + + ++++ CH +
Sbjct: 68 VKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L +
Sbjct: 126 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
Y +D+WS G I ++ F ++E I R + WP V+
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
++ + L+ ML +P R++ + L +P+ ++
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 132/312 (42%), Gaps = 47/312 (15%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
++ D+Y + +G G +G+ TG+ A KKI + RE++I++H
Sbjct: 51 DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPN-AFDVVTNAKRTLRELKILKH 109
Query: 138 LPKHPNIVTYKE------AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
KH NI+ K+ Y + ++Y+V++L E +L I + T +
Sbjct: 110 F-KHDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQL 167
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS--IFFKPGEQ---FCEIVG 246
LR +K H V+HRDLKP N L +EN +LK DFG++ + P E E V
Sbjct: 168 LRGLKYMHSAQVIHRDLKPSNLLV---NENCELKIGDFGMARGLCTSPAEHQYFMTEYVA 224
Query: 247 SPYYMAPEVL--RRNYGPEIDVWSAGVI---------------------IYILLCGVPPF 283
+ +Y APE++ Y ID+WS G I + +++ G P
Sbjct: 225 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSP 284
Query: 284 WAETEEGI--AHAIIRGKIDFERDPW----PKVSKEAKELVKNMLDPNPYNRLTLEEVLE 337
G A I+ + PW P ++A L+ ML P R++ L
Sbjct: 285 AVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344
Query: 338 NPWIKNDNHAPN 349
+P++ H P+
Sbjct: 345 HPFLAK-YHDPD 355
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 42/290 (14%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
+++G G +G+ ++ TGE A KKI +L TE + RE+ +++ L HPNI
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 64
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
V + ++ +YLV E + ++ T + + ++++ CH +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L +
Sbjct: 123 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
Y +D+WS G I ++ F ++E I R + WP V+
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
++ + L+ ML +P R++ + L +P+ ++
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 42/290 (14%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
+++G G +G+ ++ TGE A KKI +L TE + RE+ +++ L HPNI
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 64
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
V + ++ +YLV E + ++ T + + ++++ CH +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L +
Sbjct: 123 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
Y +D+WS G I ++ F ++E I R + WP V+
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
++ + L+ ML +P R++ + L +P+ ++
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 130/309 (42%), Gaps = 49/309 (15%)
Query: 75 AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
G + D +YT +G G +G+ ++ A KKI+ + +T RE
Sbjct: 12 VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ--RTLRE 69
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
++I+ +H NI+ + E +Y+V +L E +L+ +++ H +
Sbjct: 70 IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 126
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
ILR +K H V+HRDLKP N L + LK DFGL+ P
Sbjct: 127 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLT 183
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPF---------------WA 285
E V + +Y APE++ + Y ID+WS G I+ +L P F
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 243
Query: 286 ETEEGIAHAIIRGKI--------DFERDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
E+ + II K + PW P +A +L+ ML NP+ R+ +E
Sbjct: 244 SPEQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 303
Query: 334 EVLENPWIK 342
+ L +P+++
Sbjct: 304 QALAHPYLE 312
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 132/309 (42%), Gaps = 49/309 (15%)
Query: 75 AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
G + D +YT +G G +G+ ++ A KKI+ + +T RE
Sbjct: 14 VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ--RTLRE 71
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
++I+ +H NI+ + E +Y+V +L E +L+ +++ H +
Sbjct: 72 IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 128
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
ILR +K H V+HRDLKP N L + LK DFGL+ P
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTXDLKICDFGLARVADPDHDHTGFLT 185
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPF----------------W 284
E V + +Y APE++ + Y ID+WS G I+ +L P F
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 245
Query: 285 AETEEGIAHAIIRGKIDF-------ERDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
+ ++E + I ++ + PW P +A +L+ ML NP+ R+ +E
Sbjct: 246 SPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 305
Query: 334 EVLENPWIK 342
+ L +P+++
Sbjct: 306 QALAHPYLE 314
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 132/309 (42%), Gaps = 49/309 (15%)
Query: 75 AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
G + D +YT +G G +G+ ++ A KKI+ + +T RE
Sbjct: 14 VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ--RTLRE 71
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
++I+ +H NI+ + E +Y+V +L E +L+ +++ H +
Sbjct: 72 IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 128
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
ILR +K H V+HRDLKP N L + LK DFGL+ P
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTXDLKIXDFGLARVADPDHDHTGFLT 185
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPF----------------W 284
E V + +Y APE++ + Y ID+WS G I+ +L P F
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 245
Query: 285 AETEEGIAHAIIRGKIDF-------ERDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
+ ++E + I ++ + PW P +A +L+ ML NP+ R+ +E
Sbjct: 246 SPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 305
Query: 334 EVLENPWIK 342
+ L +P+++
Sbjct: 306 QALAHPYLE 314
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 128/290 (44%), Gaps = 42/290 (14%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
+++G G +G+ ++ TGE A KKI +L TE + RE+ +++ L HPNI
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 66
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
V + ++ +YLV E + + ++ T + + ++++ CH +
Sbjct: 67 VKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L +
Sbjct: 125 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
Y +D+WS G I ++ F ++E I R + WP V+
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 241
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
++ + L+ ML +P R++ + L +P+ ++
Sbjct: 242 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 128/290 (44%), Gaps = 42/290 (14%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
+++G G +G+ ++ TGE A KKI +L TE + RE+ +++ L HPNI
Sbjct: 13 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 68
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
V + ++ +YLV E + + ++ T + + ++++ CH +
Sbjct: 69 VKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L +
Sbjct: 127 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 183
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
Y +D+WS G I ++ F ++E I R + WP V+
Sbjct: 184 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 243
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
++ + L+ ML +P R++ + L +P+ ++
Sbjct: 244 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 293
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 128/290 (44%), Gaps = 42/290 (14%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
+++G G +G+ ++ TGE A KKI +L TE + RE+ +++ L HPNI
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 65
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
V + ++ +YLV E + + ++ T + + ++++ CH +
Sbjct: 66 VKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L +
Sbjct: 124 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
Y +D+WS G I ++ F ++E I R + WP V+
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
++ + L+ ML +P R++ + L +P+ ++
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 128/290 (44%), Gaps = 42/290 (14%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
+++G G +G+ ++ TGE A KKI +L TE + RE+ +++ L HPNI
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 67
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
V + ++ +YLV E + + ++ T + + ++++ CH +
Sbjct: 68 VKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L +
Sbjct: 126 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
Y +D+WS G I ++ F ++E I R + WP V+
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
++ + L+ ML +P R++ + L +P+ ++
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 128/290 (44%), Gaps = 42/290 (14%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
+++G G +G+ ++ TGE A KKI +L TE + RE+ +++ L HPNI
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 66
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
V + ++ +YLV E + + ++ T + + ++++ CH +
Sbjct: 67 VKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L +
Sbjct: 125 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
Y +D+WS G I ++ F ++E I R + WP V+
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 241
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
++ + L+ ML +P R++ + L +P+ ++
Sbjct: 242 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 125/253 (49%), Gaps = 12/253 (4%)
Query: 89 LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
LGRG FG C TG+ YACKK+ K++LK E +I+ + IV+
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSR-FIVSLA 251
Query: 149 EAYEDKDAIYLVMELCEGGELFDRIVNKGH----YTERAAAAVGKTILRIVKVCHENGVM 204
A+E K + LVM + GG++ I N + E A I+ ++ H+ ++
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNII 311
Query: 205 HRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE-IVGSPYYMAPEVLR-RNYGP 262
+RDLKPEN L D + ++ D GL++ K G+ + G+P +MAPE+L Y
Sbjct: 312 YRDLKPENVLLDD---DGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF 368
Query: 263 EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP-KVSKEAKELVKNM 321
+D ++ GV +Y ++ PF A E+ + + ++ ++ + +P K S +K+ + +
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRVLEQAVTYPDKFSPASKDFCEAL 427
Query: 322 LDPNPYNRLTLEE 334
L +P RL +
Sbjct: 428 LQKDPEKRLGFRD 440
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 49/309 (15%)
Query: 75 AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
G + D +YT +G G +G+ ++ A KKI+ + +T RE
Sbjct: 22 VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ--RTLRE 79
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
++I+ +H NI+ + E +Y+V +L E +L+ +++ H +
Sbjct: 80 IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 136
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
ILR +K H V+HRDLKP N L + LK DFGL+ P
Sbjct: 137 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLT 193
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAI-IRG 298
E V + +Y APE++ + Y ID+WS G I+ +L P F + + + H + I G
Sbjct: 194 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 253
Query: 299 KIDFE---------------------RDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
E + PW P +A +L+ ML NP+ R+ +E
Sbjct: 254 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 313
Query: 334 EVLENPWIK 342
+ L +P+++
Sbjct: 314 QALAHPYLE 322
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 49/309 (15%)
Query: 75 AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
G + D +YT +G G +G+ ++ A KKI+ + +T RE
Sbjct: 14 VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ--RTLRE 71
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
++I+ +H NI+ + E +Y+V +L E +L+ +++ H +
Sbjct: 72 IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 128
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
ILR +K H V+HRDLKP N L + LK DFGL+ P
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLT 185
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAI-IRG 298
E V + +Y APE++ + Y ID+WS G I+ +L P F + + + H + I G
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 245
Query: 299 KIDFE---------------------RDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
E + PW P +A +L+ ML NP+ R+ +E
Sbjct: 246 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 305
Query: 334 EVLENPWIK 342
+ L +P+++
Sbjct: 306 QALAHPYLE 314
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +DF L+ ++ V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFYLA--RHTDDEMTGYVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 129/290 (44%), Gaps = 42/290 (14%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
+++G G +G+ ++ TGE A KKI +L TE + RE+ +++ L HPNI
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 64
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
V + ++ +YLV E +L D ++ T + + ++++ CH +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQ-DLKD-FMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
V+HRDLKPEN L + +K DFGL+ F P + V + +Y APE+L +
Sbjct: 123 RVLHRDLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
Y +D+WS G I ++ F ++E I R + WP V+
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
++ + L+ ML +P R++ + L +P+ ++
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 124/268 (46%), Gaps = 29/268 (10%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
D + K +GRG F +TG+ YA K + K + ++ R E +++ + +
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDR 120
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGK----TILRIVK 196
I A++D++ +YLVME GG+L + G ER A + + I+ +
Sbjct: 121 R-WITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFG---ERIPAEMARFYLAEIVMAID 176
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIV--GSPYYMAPE 254
H G +HRD+KP+N L ++ DFG + + +V G+P Y++PE
Sbjct: 177 SVHRLGYVHRDIKPDNILL---DRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPE 233
Query: 255 VLR--------RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDP 306
+L+ +YGPE D W+ GV Y + G PF+A++ I+ K E
Sbjct: 234 ILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYK---EHLS 290
Query: 307 WP----KVSKEAKELVKNMLDPNPYNRL 330
P V +EA++ ++ +L P P RL
Sbjct: 291 LPLVDEGVPEEARDFIQRLLCP-PETRL 317
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 49/309 (15%)
Query: 75 AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
G + D +YT +G G +G+ ++ A KKI+ + +T RE
Sbjct: 34 VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ--RTLRE 91
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
++I+ +H NI+ + E +Y+V +L E +L+ +++ H +
Sbjct: 92 IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 148
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
ILR +K H V+HRDLKP N L + LK DFGL+ P
Sbjct: 149 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLT 205
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAI-IRG 298
E V + +Y APE++ + Y ID+WS G I+ +L P F + + + H + I G
Sbjct: 206 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 265
Query: 299 KIDFE---------------------RDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
E + PW P +A +L+ ML NP+ R+ +E
Sbjct: 266 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 325
Query: 334 EVLENPWIK 342
+ L +P+++
Sbjct: 326 QALAHPYLE 334
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 132/312 (42%), Gaps = 47/312 (15%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
++ D+Y + +G G +G+ TG+ A KKI + RE++I++H
Sbjct: 52 DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPN-AFDVVTNAKRTLRELKILKH 110
Query: 138 LPKHPNIVTYKE------AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
KH NI+ K+ Y + ++Y+V++L E +L I + T +
Sbjct: 111 F-KHDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQL 168
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS--IFFKPGEQ---FCEIVG 246
LR +K H V+HRDLKP N L +EN +LK DFG++ + P E E V
Sbjct: 169 LRGLKYMHSAQVIHRDLKPSNLLV---NENCELKIGDFGMARGLCTSPAEHQYFMTEYVA 225
Query: 247 SPYYMAPEVL--RRNYGPEIDVWSAGVI---------------------IYILLCGVPPF 283
+ +Y APE++ Y ID+WS G I + +++ G P
Sbjct: 226 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSP 285
Query: 284 WAETEEGI--AHAIIRGKIDFERDPW----PKVSKEAKELVKNMLDPNPYNRLTLEEVLE 337
G A I+ + PW P ++A L+ ML P R++ L
Sbjct: 286 AVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 345
Query: 338 NPWIKNDNHAPN 349
+P++ H P+
Sbjct: 346 HPFLAK-YHDPD 356
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 49/309 (15%)
Query: 75 AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
G + D +YT +G G +G+ ++ A KKI+ + +T RE
Sbjct: 16 VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ--RTLRE 73
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
++I+ +H NI+ + E +Y+V +L E +L+ +++ H +
Sbjct: 74 IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 130
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
ILR +K H V+HRDLKP N L + LK DFGL+ P
Sbjct: 131 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLT 187
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAI-IRG 298
E V + +Y APE++ + Y ID+WS G I+ +L P F + + + H + I G
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 247
Query: 299 KIDFE---------------------RDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
E + PW P +A +L+ ML NP+ R+ +E
Sbjct: 248 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 307
Query: 334 EVLENPWIK 342
+ L +P+++
Sbjct: 308 QALAHPYLE 316
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 129/290 (44%), Gaps = 42/290 (14%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
+++G G +G+ ++ TGE A KKI +L TE + RE+ +++ L HPNI
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 67
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
V + ++ +YLV E + + + ++ T + + ++++ CH +
Sbjct: 68 VKLLDVIHTENKLYLVFEHVD--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L +
Sbjct: 126 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
Y +D+WS G I ++ F ++E I R + WP V+
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
++ + L+ ML +P R++ + L +P+ ++
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 49/309 (15%)
Query: 75 AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
G + D +YT +G G +G+ ++ A KKI+ + +T RE
Sbjct: 14 VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ--RTLRE 71
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
++I+ +H NI+ + E +Y+V +L E +L+ +++ H +
Sbjct: 72 IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 128
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
ILR +K H V+HRDLKP N L + LK DFGL+ P
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLT 185
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAI-IRG 298
E V + +Y APE++ + Y ID+WS G I+ +L P F + + + H + I G
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 245
Query: 299 KIDFE---------------------RDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
E + PW P +A +L+ ML NP+ R+ +E
Sbjct: 246 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 305
Query: 334 EVLENPWIK 342
+ L +P+++
Sbjct: 306 QALAHPYLE 314
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 49/309 (15%)
Query: 75 AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
G + D +YT +G G +G+ ++ A KKI+ + +T RE
Sbjct: 12 VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ--RTLRE 69
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
++I+ +H NI+ + E +Y+V +L E +L+ +++ H +
Sbjct: 70 IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 126
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
ILR +K H V+HRDLKP N L + LK DFGL+ P
Sbjct: 127 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLT 183
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAI-IRG 298
E V + +Y APE++ + Y ID+WS G I+ +L P F + + + H + I G
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 243
Query: 299 KIDFE---------------------RDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
E + PW P +A +L+ ML NP+ R+ +E
Sbjct: 244 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 303
Query: 334 EVLENPWIK 342
+ L +P+++
Sbjct: 304 QALAHPYLE 312
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 49/309 (15%)
Query: 75 AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
G + D +YT +G G +G+ ++ A KKI+ + +T RE
Sbjct: 14 VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ--RTLRE 71
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
++I+ +H NI+ + E +Y+V +L E +L+ +++ H +
Sbjct: 72 IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 128
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
ILR +K H V+HRDLKP N L + LK DFGL+ P
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTXDLKICDFGLARVADPDHDHTGFLT 185
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAI-IRG 298
E V + +Y APE++ + Y ID+WS G I+ +L P F + + + H + I G
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 245
Query: 299 KIDFE---------------------RDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
E + PW P +A +L+ ML NP+ R+ +E
Sbjct: 246 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 305
Query: 334 EVLENPWIK 342
+ L +P+++
Sbjct: 306 QALAHPYLE 314
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 128/306 (41%), Gaps = 54/306 (17%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
+Y K LG G G+ + + + A KKI L + RE++I+R L H
Sbjct: 12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIV---LTDPQSVKHALREIKIIRRL-DH 67
Query: 142 PNIVTYKE--------------AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAV 187
NIV E + + +++Y+V E E ++ +G E A
Sbjct: 68 DNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETD--LANVLEQGPLLEEHARLF 125
Query: 188 GKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE----QFCE 243
+LR +K H V+HRDLKP N +E+ LK DFGL+ P E
Sbjct: 126 MYQLLRGLKYIHSANVLHRDLKPANLFI--NTEDLVLKIGDFGLARIMDPHYSHKGHLSE 183
Query: 244 IVGSPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLCG-------------------VPP 282
+ + +Y +P +L NY ID+W+AG I +L G +P
Sbjct: 184 GLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPV 243
Query: 283 FWAETEEGIAHAI---IRGKIDFERDPW----PKVSKEAKELVKNMLDPNPYNRLTLEEV 335
E + + I IR + P P +S+EA + ++ +L +P +RLT EE
Sbjct: 244 VHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEA 303
Query: 336 LENPWI 341
L +P++
Sbjct: 304 LSHPYM 309
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 49/309 (15%)
Query: 75 AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
G + D +YT +G G +G+ ++ A KKI+ + +T RE
Sbjct: 19 VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ--RTLRE 76
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
++I+ +H NI+ + E +Y+V +L E +L+ +++ H +
Sbjct: 77 IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 133
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
ILR +K H V+HRDLKP N L + LK DFGL+ P
Sbjct: 134 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLT 190
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAI-IRG 298
E V + +Y APE++ + Y ID+WS G I+ +L P F + + + H + I G
Sbjct: 191 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 250
Query: 299 KIDFE---------------------RDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
E + PW P +A +L+ ML NP+ R+ +E
Sbjct: 251 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 310
Query: 334 EVLENPWIK 342
+ L +P+++
Sbjct: 311 QALAHPYLE 319
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 49/309 (15%)
Query: 75 AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
G + D +YT +G G +G+ ++ A KKI+ + +T RE
Sbjct: 20 VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ--RTLRE 77
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
++I+ +H NI+ + E +Y+V +L E +L+ +++ H +
Sbjct: 78 IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 134
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
ILR +K H V+HRDLKP N L + LK DFGL+ P
Sbjct: 135 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLT 191
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAI-IRG 298
E V + +Y APE++ + Y ID+WS G I+ +L P F + + + H + I G
Sbjct: 192 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 251
Query: 299 KIDFE---------------------RDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
E + PW P +A +L+ ML NP+ R+ +E
Sbjct: 252 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 311
Query: 334 EVLENPWIK 342
+ L +P+++
Sbjct: 312 QALAHPYLE 320
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 49/309 (15%)
Query: 75 AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
G + D +YT +G G +G+ ++ A KKI+ + +T RE
Sbjct: 11 VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ--RTLRE 68
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
++I+ +H NI+ + E +Y+V +L E +L+ +++ H +
Sbjct: 69 IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 125
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
ILR +K H V+HRDLKP N L + LK DFGL+ P
Sbjct: 126 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLT 182
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAI-IRG 298
E V + +Y APE++ + Y ID+WS G I+ +L P F + + + H + I G
Sbjct: 183 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 242
Query: 299 KIDFE---------------------RDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
E + PW P +A +L+ ML NP+ R+ +E
Sbjct: 243 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 302
Query: 334 EVLENPWIK 342
+ L +P+++
Sbjct: 303 QALAHPYLE 311
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 49/309 (15%)
Query: 75 AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
G + D +YT +G G +G+ ++ A KKI+ + +T RE
Sbjct: 18 VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ--RTLRE 75
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
++I+ +H NI+ + E +Y+V +L E +L+ +++ H +
Sbjct: 76 IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 132
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
ILR +K H V+HRDLKP N L + LK DFGL+ P
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAI-IRG 298
E V + +Y APE++ + Y ID+WS G I+ +L P F + + + H + I G
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 249
Query: 299 KIDFE---------------------RDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
E + PW P +A +L+ ML NP+ R+ +E
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 309
Query: 334 EVLENPWIK 342
+ L +P+++
Sbjct: 310 QALAHPYLE 318
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 49/309 (15%)
Query: 75 AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
G + D +YT +G G +G+ ++ A KKI+ + +T RE
Sbjct: 18 VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ--RTLRE 75
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
++I+ +H NI+ + E +Y+V +L E +L+ +++ H +
Sbjct: 76 IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 132
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
ILR +K H V+HRDLKP N L + LK DFGL+ P
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAI-IRG 298
E V + +Y APE++ + Y ID+WS G I+ +L P F + + + H + I G
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 249
Query: 299 KIDFE---------------------RDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
E + PW P +A +L+ ML NP+ R+ +E
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 309
Query: 334 EVLENPWIK 342
+ L +P+++
Sbjct: 310 QALAHPYLE 318
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK + FGL+ ++ V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDCELKILGFGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 131/308 (42%), Gaps = 49/308 (15%)
Query: 75 AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
G + D +YT +G G +G+ ++ A KKI+ + +T RE
Sbjct: 16 VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ--RTLRE 73
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
++I+ +H NI+ + E +Y+V +L E +L+ +++ H +
Sbjct: 74 IKILLAF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 130
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
ILR +K H V+HRDLKP N L + LK DFGL+ P
Sbjct: 131 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLT 187
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAI-IRG 298
E V + +Y APE++ + Y ID+WS G I+ +L P F + + + H + I G
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 247
Query: 299 KIDFE---------------------RDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
E + PW P +A +L+ ML NP+ R+ +E
Sbjct: 248 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 307
Query: 334 EVLENPWI 341
+ L +P++
Sbjct: 308 QALAHPYL 315
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 49/309 (15%)
Query: 75 AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
G + D +YT +G G +G+ ++ A KKI+ + +T RE
Sbjct: 18 VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQ--RTLRE 75
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
++I+ +H NI+ + E +Y+V +L E +L+ +++ H +
Sbjct: 76 IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 132
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
ILR +K H V+HRDLKP N L + LK DFGL+ P
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAI-IRG 298
E V + +Y APE++ + Y ID+WS G I+ +L P F + + + H + I G
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 249
Query: 299 KIDFE---------------------RDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
E + PW P +A +L+ ML NP+ R+ +E
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 309
Query: 334 EVLENPWIK 342
+ L +P+++
Sbjct: 310 QALAHPYLE 318
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 49/309 (15%)
Query: 75 AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
G + D +YT +G G +G+ ++ A KKI+ + +T RE
Sbjct: 18 VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ--RTLRE 75
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
++I+ +H NI+ + E +Y+V +L E +L+ +++ H +
Sbjct: 76 IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 132
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
ILR +K H V+HRDLKP N L + LK DFGL+ P
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLX 189
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAI-IRG 298
E V + +Y APE++ + Y ID+WS G I+ +L P F + + + H + I G
Sbjct: 190 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 249
Query: 299 KIDFE---------------------RDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
E + PW P +A +L+ ML NP+ R+ +E
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 309
Query: 334 EVLENPWIK 342
+ L +P+++
Sbjct: 310 QALAHPYLE 318
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 49/309 (15%)
Query: 75 AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
G + D +YT +G G +G+ ++ A KKI+ + +T RE
Sbjct: 19 VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ--RTLRE 76
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
++I+ +H NI+ + E +Y+V +L E +L+ +++ H +
Sbjct: 77 IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 133
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
ILR +K H V+HRDLKP N L + LK DFGL+ P
Sbjct: 134 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLX 190
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAI-IRG 298
E V + +Y APE++ + Y ID+WS G I+ +L P F + + + H + I G
Sbjct: 191 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 250
Query: 299 KIDFE---------------------RDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
E + PW P +A +L+ ML NP+ R+ +E
Sbjct: 251 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 310
Query: 334 EVLENPWIK 342
+ L +P+++
Sbjct: 311 QALAHPYLE 319
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 42/290 (14%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
+++G G +G+ ++ TGE A KKI +L TE + RE+ +++ L HPNI
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 67
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
V + ++ +YLV E + ++ T + + ++++ CH +
Sbjct: 68 VKLLDVIHTENKLYLVFEFLH--QDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L +
Sbjct: 126 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
Y +D+WS G I ++ F ++E I R + WP V+
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
++ + L+ ML +P R++ + L +P+ ++
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +D GL+ ++ V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDAGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 132/300 (44%), Gaps = 46/300 (15%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
+YT + +G G +G+ ++ A KKI+ + +T RE++I+ +H
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQ--RTLREIQILLRF-RH 100
Query: 142 PNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
N++ ++ E +Y+V +L E +L+ +++ + ILR +K
Sbjct: 101 ENVIGIRDILRASTLEAMRDVYIVQDLMET-DLY-KLLKSQQLSNDHICYFLYQILRGLK 158
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FCEIVGSPYYMA 252
H V+HRDLKP N L + LK DFGL+ P E V + +Y A
Sbjct: 159 YIHSANVLHRDLKPSNLLI---NTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRA 215
Query: 253 PEVL--RRNYGPEIDVWSAGVIIYILLCGVPPF----------------WAETEEGIAHA 294
PE++ + Y ID+WS G I+ +L P F + ++E +
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 275
Query: 295 I-IRGKIDFERDP----------WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
I ++ + + P +PK +A +L+ ML NP R+T+EE L +P+++
Sbjct: 276 INMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQ 335
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 100/201 (49%), Gaps = 17/201 (8%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIV- 145
+ +G G +G ++ + A KK+++ ++ I RE+ +++HL KH N++
Sbjct: 26 RPVGSGAYGSVCSAYDARLRQKVAVKKLSR-PFQSLIHARRTYRELRLLKHL-KHENVIG 83
Query: 146 -----TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
T + ED +YLV L G + IV ++ + +LR +K H
Sbjct: 84 LLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS 141
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRR-- 258
G++HRDLKP N +E+ +L+ +DFGL+ + E+ V + +Y APE++
Sbjct: 142 AGIIHRDLKPSNVAV---NEDCELRILDFGLA--RQADEEMTGYVATRWYRAPEIMLNWM 196
Query: 259 NYGPEIDVWSAGVIIYILLCG 279
+Y +D+WS G I+ LL G
Sbjct: 197 HYNQTVDIWSVGCIMAELLQG 217
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 132/309 (42%), Gaps = 49/309 (15%)
Query: 75 AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
G + D +YT +G G +G+ ++ A +KI+ + +T RE
Sbjct: 18 VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQ--RTLRE 75
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
++I+ +H NI+ + E +Y+V +L E +L+ +++ H +
Sbjct: 76 IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 132
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
ILR +K H V+HRDLKP N L + LK DFGL+ P
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAI-IRG 298
E V + +Y APE++ + Y ID+WS G I+ +L P F + + + H + I G
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 249
Query: 299 KIDFE---------------------RDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
E + PW P +A +L+ ML NP+ R+ +E
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 309
Query: 334 EVLENPWIK 342
+ L +P+++
Sbjct: 310 QALAHPYLE 318
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G +L + IV T+ + ILR
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +D GL+ ++ V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDRGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 129/290 (44%), Gaps = 42/290 (14%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
+++G G +G+ ++ TGE A KKI +L TE + RE+ +++ L HPNI
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 66
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
V + ++ +YLV E +L D ++ T + + ++++ CH +
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-SMDLKD-FMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L +
Sbjct: 125 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
Y +D+WS G I ++ F ++E I R + WP V+
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 241
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
++ + L+ ML +P R++ + L +P+ ++
Sbjct: 242 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 49/309 (15%)
Query: 75 AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
G + D +YT +G G +G+ ++ A KKI+ + +T RE
Sbjct: 18 VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ--RTLRE 75
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
++I+ +H NI+ + E +Y+V +L E +L+ +++ H +
Sbjct: 76 IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKCQHLSNDHICY 132
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
ILR +K H V+HRDLKP N L + LK DFGL+ P
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAI-IRG 298
E V + +Y APE++ + Y ID+WS G I+ +L P F + + + H + I G
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 249
Query: 299 KIDFE---------------------RDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
E + PW P +A +L+ ML NP+ R+ +E
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 309
Query: 334 EVLENPWIK 342
+ L +P+++
Sbjct: 310 QALAHPYLE 318
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 129/290 (44%), Gaps = 42/290 (14%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
+++G G +G+ ++ TGE A KKI +L TE + RE+ +++ L HPNI
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 67
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
V + ++ +YLV E +L D ++ T + + ++++ CH +
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-SMDLKD-FMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L +
Sbjct: 126 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
Y +D+WS G I ++ F ++E I R + WP V+
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
++ + L+ ML +P R++ + L +P+ ++
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 126/290 (43%), Gaps = 42/290 (14%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
+++G G +G+ ++ TGE A KI +L TE + RE+ +++ L HPNI
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALXKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 64
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
V + ++ +YLV E + ++ T + + ++++ CH +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L +
Sbjct: 123 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
Y +D+WS G I ++ F ++E I R + WP V+
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
++ + L+ ML +P R++ + L +P+ ++
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 126/290 (43%), Gaps = 42/290 (14%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
+++G G +G+ ++ TGE A KI +L TE + RE+ +++ L HPNI
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALXKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 63
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
V + ++ +YLV E + ++ T + + ++++ CH +
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
V+HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L +
Sbjct: 122 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
Y +D+WS G I ++ F ++E I R + WP V+
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
++ + L+ ML +P R++ + L +P+ ++
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 17/207 (8%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y +G G +G F+ +TG A KK+++ ++ I RE+ +++H+ K
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
H N++ T + E+ + +YLV L G + IV T+ + ILR
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+K H ++HRDLKP N +E+ +LK +D GL+ ++ V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDGGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
++ +Y +D+WS G I+ LL G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 129/298 (43%), Gaps = 58/298 (19%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
+++G G +G+ ++ TGE A KKI +L TE + RE+ +++ L HPNI
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 63
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK-------- 196
V + ++ +YLV E V++ T A+A+ L ++K
Sbjct: 64 VKLLDVIHTENKLYLVFEH----------VHQDLKTFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 197 ---VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMA 252
CH + V+HRDLKP+N L + +K DFGL+ F P + V + +Y A
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 170
Query: 253 PEVLR--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
PE+L + Y +D+WS G I ++ F ++E I R + WP V
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 230
Query: 311 S-------------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
+ ++ + L+ ML +P R++ + L +P+ ++
Sbjct: 231 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 143/336 (42%), Gaps = 54/336 (16%)
Query: 51 VSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYA 110
++KH N+ K + Q SV + +L +Y K +G G GI ++ A
Sbjct: 33 IAKHY-NMSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVA 91
Query: 111 CKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIV------TYKEAYEDKDAIYLVMELC 164
KK+++ + + RE+ +M+ + H NI+ T ++ E+ +YLVMEL
Sbjct: 92 IKKLSR-PFQNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELM 149
Query: 165 EGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQL 224
+ +++ ER + + + + I K H G++HRDLKP N + + L
Sbjct: 150 DAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVV---KSDCTL 203
Query: 225 KAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVII---------- 273
K +DFGL+ V + YY APEV L Y +D+WS G I+
Sbjct: 204 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 263
Query: 274 -----------YILLCGVP-PFWAETEEGIAHAIIRGKIDFERDPWPKV----------- 310
I G P P + + + + + + +PK+
Sbjct: 264 PGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSE 323
Query: 311 -----SKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
+ +A++L+ ML +P R+++++ L++P+I
Sbjct: 324 HNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 359
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 141/330 (42%), Gaps = 55/330 (16%)
Query: 58 VDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKE 117
+ K + Q SV + +L +Y K +G G GI F+ G A KK+++
Sbjct: 1 MSKSKVDNQFYSVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSR- 59
Query: 118 KLKTEIDIDDVRREVEIMRHLPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFD 171
+ + RE+ +++ + H NI+ T ++ E+ +YLVMEL +
Sbjct: 60 PFQNQTHAKRAYRELVLLKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LC 116
Query: 172 RIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL 231
++++ ER + + + + I K H G++HRDLKP N + + LK +DFGL
Sbjct: 117 QVIHMELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGL 172
Query: 232 SIFFKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVIIYILLCGVPPF------- 283
+ V + YY APEV L Y +D+WS G I+ L+ G F
Sbjct: 173 ARTACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHID 232
Query: 284 -WAETEEGIA----------HAIIRGKIDFERDPWPKV---------------------S 311
W + E + +R ++ R +P + +
Sbjct: 233 QWNKVIEQLGTPSAEFMAALQPTVRNYVE-NRPKYPGIKFEELFPDWIFPSESERDKIKT 291
Query: 312 KEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
+A++L+ ML +P R++++E L +P+I
Sbjct: 292 SQARDLLSKMLVIDPDKRISVDEALRHPYI 321
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 116/251 (46%), Gaps = 37/251 (14%)
Query: 49 ESVSKHASNVDKKSISF-QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGE 107
E+ S S+ S SF +L++V +N E I G ++G G FG+ ++ + T
Sbjct: 1 ENKSLEVSDTRFHSFSFYELKNVTNNFDERPI---SVGGNKMGEGGFGVVYKGYVNNT-- 55
Query: 108 TYACKKIA------KEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM 161
T A KK+A E+LK + D +E+++M +H N+V D D + LV
Sbjct: 56 TVAVKKLAAMVDITTEELKQQFD-----QEIKVMAKC-QHENLVELLGFSSDGDDLCLVY 109
Query: 162 ELCEGGELFDRI-----VNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFA 216
G L DR+ + R A G + HEN +HRD+K N L
Sbjct: 110 VYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAA--NGINFLHENHHIHRDIKSANILL- 166
Query: 217 DGSENSQLKAIDFGLSIFFKPGEQFCE------IVGSPYYMAPEVLRRNYGPEIDVWSAG 270
E K DFGL+ + E+F + IVG+ YMAPE LR P+ D++S G
Sbjct: 167 --DEAFTAKISDFGLA---RASEKFAQTVMXSRIVGTTAYMAPEALRGEITPKSDIYSFG 221
Query: 271 VIIYILLCGVP 281
V++ ++ G+P
Sbjct: 222 VVLLEIITGLP 232
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 116/251 (46%), Gaps = 37/251 (14%)
Query: 49 ESVSKHASNVDKKSISF-QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGE 107
E+ S S+ S SF +L++V +N E I G ++G G FG+ ++ + T
Sbjct: 1 ENKSLEVSDTRFHSFSFYELKNVTNNFDERPI---SVGGNKMGEGGFGVVYKGYVNNT-- 55
Query: 108 TYACKKIA------KEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM 161
T A KK+A E+LK + D +E+++M +H N+V D D + LV
Sbjct: 56 TVAVKKLAAMVDITTEELKQQFD-----QEIKVMAKC-QHENLVELLGFSSDGDDLCLVY 109
Query: 162 ELCEGGELFDRI-----VNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFA 216
G L DR+ + R A G + HEN +HRD+K N L
Sbjct: 110 VYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAA--NGINFLHENHHIHRDIKSANILL- 166
Query: 217 DGSENSQLKAIDFGLSIFFKPGEQFCE------IVGSPYYMAPEVLRRNYGPEIDVWSAG 270
E K DFGL+ + E+F + IVG+ YMAPE LR P+ D++S G
Sbjct: 167 --DEAFTAKISDFGLA---RASEKFAQTVMXXRIVGTTAYMAPEALRGEITPKSDIYSFG 221
Query: 271 VIIYILLCGVP 281
V++ ++ G+P
Sbjct: 222 VVLLEIITGLP 232
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 136/296 (45%), Gaps = 47/296 (15%)
Query: 83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
Y +G G +G + +GE A KK+++ ++EI RE+ +++H+ +H
Sbjct: 44 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSR-PFQSEIFAKRAYRELLLLKHM-QHE 101
Query: 143 NIVTYKEAYEDKDAI------YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
N++ + + ++ YLVM + +I+ ++E + +L+ +K
Sbjct: 102 NVIGLLDVFTPASSLRNFYDFYLVMPFMQTD--LQKIMGM-EFSEEKIQYLVYQMLKGLK 158
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
H GV+HRDLKP N +E+ +LK +DFGL+ + V + +Y APEV+
Sbjct: 159 YIHSAGVVHRDLKPGNLAV---NEDCELKILDFGLAR--HADAEMTGYVVTRWYRAPEVI 213
Query: 257 RR--NYGPEIDVWSAGVIIYILL---------------------CGVP--PFWAETEEGI 291
+Y +D+WS G I+ +L GVP F + +
Sbjct: 214 LSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKA 273
Query: 292 AHAIIRG-----KIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
A + I+ + DF + +P+ S +A +L++ ML+ + RLT + L +P+ +
Sbjct: 274 AKSYIQSLPQTPRKDFTQ-LFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 328
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 143/336 (42%), Gaps = 54/336 (16%)
Query: 51 VSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYA 110
++KH N+ K + Q SV + +L +Y K +G G GI ++ A
Sbjct: 33 IAKHY-NMSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVA 91
Query: 111 CKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIV------TYKEAYEDKDAIYLVMELC 164
KK+++ + + RE+ +M+ + H NI+ T ++ E+ +YLVMEL
Sbjct: 92 IKKLSRP-FQNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELM 149
Query: 165 EGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQL 224
+ +++ ER + + + + I K H G++HRDLKP N + + L
Sbjct: 150 DAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVV---KSDCTL 203
Query: 225 KAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVII---------- 273
K +DFGL+ V + YY APEV L Y +D+WS G I+
Sbjct: 204 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 263
Query: 274 -----------YILLCGVP-PFWAETEEGIAHAIIRGKIDFERDPWPKV----------- 310
I G P P + + + + + + +PK+
Sbjct: 264 PGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSE 323
Query: 311 -----SKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
+ +A++L+ ML +P R+++++ L++P+I
Sbjct: 324 HNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 359
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 135/308 (43%), Gaps = 45/308 (14%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP-- 139
+Y E+G G +G + +++ G + K + + E REV ++RHL
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 140 KHPNIVTYKE----AYEDKDA-IYLVMELCEG--GELFDRIVNKGHYTERAAAAVGKTIL 192
+HPN+V + + D++ + LV E + D++ G TE + + +L
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ-LL 130
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMA 252
R + H + V+HRDLKP+N L + + Q+K DFGL+ + +V + +Y A
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADFGLARIYSFQMALTSVVVTLWYRA 187
Query: 253 PEV-LRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAI-----IRGKIDFERD- 305
PEV L+ +Y +D+WS G I + P F ++ I + G+ D+ RD
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV 247
Query: 306 -------------PWPKVSKEAKELVKNM----LDPNPYNRLTLEEVLENPWIKN----- 343
P K + EL K++ L NP R++ L +P+ ++
Sbjct: 248 ALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERCK 307
Query: 344 ---DNHAP 348
D+H P
Sbjct: 308 ENLDSHLP 315
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 128/300 (42%), Gaps = 27/300 (9%)
Query: 57 NVDKKSISFQ------LRSVVSNPAEGNILDKYTFGK--ELGRGEFGITHQCFEIETGET 108
+ + +SF+ L+S +P+ + +F + LG G +G + E G
Sbjct: 25 QLQPRRVSFRGEASETLQSPGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRL 84
Query: 109 YACKKIAKEKLKTEIDIDDVRREVEIMRH--LPKHPNIVTYKEAYEDKDAIYLVMELCEG 166
YA K+ + D R+ E+ H + +HP V ++A+E+ +YL ELC G
Sbjct: 85 YAVKRSMSPFRGPK---DRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-G 140
Query: 167 GELFDRIVNKGHYTERAA--AAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQL 224
L G A + T+L + + H G++H D+KP N +
Sbjct: 141 PSLQQHCEAWGASLPEAQVWGYLRDTLLALAHL-HSQGLVHLDVKPANIFLGP---RGRC 196
Query: 225 KAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVP-PF 283
K DFGL + G P YMAPE+L+ +YG DV+S G+ I + C + P
Sbjct: 197 KLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPH 256
Query: 284 WAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
E + + + + +S E + ++ ML+P+P R T E +L P ++
Sbjct: 257 GGEGWQQLRQGYLPPEFT------AGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ 310
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 138/322 (42%), Gaps = 55/322 (17%)
Query: 66 QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI 125
Q SV + +L +Y K +G G GI F+ G A KK+++ + +
Sbjct: 7 QFYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSR-PFQNQTHA 65
Query: 126 DDVRREVEIMRHLPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHY 179
RE+ +++ + H NI+ T ++ E+ +YLVMEL + ++++
Sbjct: 66 KRAYRELVLLKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIHMELD 122
Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
ER + + + + I K H G++HRDLKP N + + LK +DFGL+
Sbjct: 123 HERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTASTNF 178
Query: 240 QFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVIIYILLCGVPPF--------WAETEEG 290
V + YY APEV L Y +D+WS G I+ L+ G F W + E
Sbjct: 179 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQ 238
Query: 291 IA----------HAIIRGKIDFERDPWPKV---------------------SKEAKELVK 319
+ +R ++ R +P + + +A++L+
Sbjct: 239 LGTPSAEFMAALQPTVRNYVE-NRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLS 297
Query: 320 NMLDPNPYNRLTLEEVLENPWI 341
ML +P R++++E L +P+I
Sbjct: 298 KMLVIDPDKRISVDEALRHPYI 319
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 113/247 (45%), Gaps = 30/247 (12%)
Query: 130 REVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGK 189
REV +++ L KH NIVT + + ++ LV E + +L + + G+ +
Sbjct: 49 REVSLLKDL-KHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFL 106
Query: 190 -TILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL----SIFFKPGEQFCEI 244
+LR + CH V+HRDLKP+N L +E +LK DFGL SI P + +
Sbjct: 107 FQLLRGLAYCHRQKVLHRDLKPQNLLI---NERGELKLADFGLARAKSI---PTKTYDNE 160
Query: 245 VGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDF 302
V + +Y P++L +Y +ID+W G I Y + G P F T E H I R
Sbjct: 161 VVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTP 220
Query: 303 ERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNV-SLGGNVTSRIK 361
+ WP + + N Y + E +L +HAP + S G ++ +++
Sbjct: 221 TEETWPGILSNEEFKTYN------YPKYRAEALL--------SHAPRLDSDGADLLTKLL 266
Query: 362 QFSIMNK 368
QF N+
Sbjct: 267 QFEGRNR 273
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 109/234 (46%), Gaps = 36/234 (15%)
Query: 65 FQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIA------KEK 118
++L++V +N E I G ++G G FG+ ++ + T T A KK+A E+
Sbjct: 12 YELKNVTNNFDERPI---SVGGNKMGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEE 66
Query: 119 LKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI----- 173
LK + D +E+++M +H N+V D D + LV G L DR+
Sbjct: 67 LKQQFD-----QEIKVMAKC-QHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG 120
Query: 174 VNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI 233
+ R A G + HEN +HRD+K N L E K DFGL+
Sbjct: 121 TPPLSWHMRCKIAQGAA--NGINFLHENHHIHRDIKSANILL---DEAFTAKISDFGLA- 174
Query: 234 FFKPGEQFCE------IVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVP 281
+ E+F + IVG+ YMAPE LR P+ D++S GV++ ++ G+P
Sbjct: 175 --RASEKFAQXVMXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLP 226
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 136/296 (45%), Gaps = 47/296 (15%)
Query: 83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
Y +G G +G + +GE A KK+++ ++EI RE+ +++H+ +H
Sbjct: 26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSR-PFQSEIFAKRAYRELLLLKHM-QHE 83
Query: 143 NIVTYKEAYEDKDAI------YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
N++ + + ++ YLVM + +I+ E+ V + +L+ +K
Sbjct: 84 NVIGLLDVFTPASSLRNFYDFYLVMPFMQTD--LQKIMGLKFSEEKIQYLVYQ-MLKGLK 140
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
H GV+HRDLKP N +E+ +LK +DFGL+ + V + +Y APEV+
Sbjct: 141 YIHSAGVVHRDLKPGNLAV---NEDCELKILDFGLAR--HADAEMTGYVVTRWYRAPEVI 195
Query: 257 RR--NYGPEIDVWSAGVIIYILL---------------------CGVP--PFWAETEEGI 291
+Y +D+WS G I+ +L GVP F + +
Sbjct: 196 LSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKA 255
Query: 292 AHAIIRG-----KIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
A + I+ + DF + +P+ S +A +L++ ML+ + RLT + L +P+ +
Sbjct: 256 AKSYIQSLPQTPRKDFTQ-LFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 310
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 127/287 (44%), Gaps = 47/287 (16%)
Query: 89 LGRGEFGITHQCFEIETGETYACKKI--AKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
LG+G FG + YA KKI +EKL T + EV ++ L H +V
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLST------ILSEVMLLASL-NHQYVVR 66
Query: 147 YKEAY-------------EDKDAIYLVMELCEGGELFDRIVNKGHYTER-AAAAVGKTIL 192
Y A+ + K +++ ME CE G L+D I ++ +R + + IL
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQIL 126
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-------------PG- 238
+ H G++HRDLKP N +F D S N +K DFGL+ PG
Sbjct: 127 EALSYIHSQGIIHRDLKPMN-IFIDESRN--VKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 239 -EQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEE-GIAHA 294
+ +G+ Y+A EVL +Y +ID++S G+I + ++ PF E I
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKK 240
Query: 295 IIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
+ I+F D K K++++ ++D +P R +L + W+
Sbjct: 241 LRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 128/261 (49%), Gaps = 12/261 (4%)
Query: 83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
+T +++G+G FG + + T + A K I + + E +I+D+++E+ ++ P
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKII--DLEEAEDEIEDIQQEITVLSQC-DSP 80
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
+ Y +Y ++++ME GG D ++ G E A + + IL+ + H
Sbjct: 81 YVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEK 139
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-QFCEIVGSPYYMAPEVLRRN-Y 260
+HRD+K N L SE+ ++K DFG++ + + VG+P++MAPEV++++ Y
Sbjct: 140 KIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAY 196
Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
+ D+WS G+ L G PP + I + + SK KE V+
Sbjct: 197 DSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNY---SKPLKEFVEA 253
Query: 321 MLDPNPYNRLTLEEVLENPWI 341
L+ P R T +E+L++ +I
Sbjct: 254 CLNKEPSFRPTAKELLKHKFI 274
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYA--CKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
T G+ +G G FG ++ G+ + K+ T + + EV ++R +H
Sbjct: 15 TVGQRIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRH 67
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCHE 200
NI+ + Y K + +V + CEG L+ + ++ + + + + R + H
Sbjct: 68 VNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 126
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF---FKPGEQFCEIVGSPYYMAPEVLR 257
++HRDLK N E++ +K DFGL+ + QF ++ GS +MAPEV+R
Sbjct: 127 KSIIHRDLKSNNIFL---HEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 183
Query: 258 RN----YGPEIDVWSAGVIIYILLCGVPPF 283
Y + DV++ G+++Y L+ G P+
Sbjct: 184 MQDSNPYSFQSDVYAFGIVLYELMTGQLPY 213
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 132/285 (46%), Gaps = 22/285 (7%)
Query: 88 ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
ELG G G+ + +G A +K+ ++K I + + RE++++ H P IV +
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIR-NQIIRELQVL-HECNSPYIVGF 69
Query: 148 KEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE-NGVMHR 206
A+ I + ME +GG L + G E+ V +++ + E + +MHR
Sbjct: 70 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 129
Query: 207 DLKPENFLFADGSENSQLKAIDFGLS--IFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPE 263
D+KP N L + ++K DFG+S + F VG+ YM+PE L+ +Y +
Sbjct: 130 DVKPSNILV---NSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMSPERLQGTHYSVQ 183
Query: 264 IDVWSAGVIIYILLCG---VPPFWAETEEGIAHAIIRGKIDFERDPWPKV-----SKEAK 315
D+WS G+ + + G +PP A+ + AI +P PK+ S E +
Sbjct: 184 SDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQ 243
Query: 316 ELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRI 360
+ V L NP R L++++ + +IK + A V G + S I
Sbjct: 244 DFVNKCLIKNPAERADLKQLMVHAFIKRSD-AEEVDFAGWLCSTI 287
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 123/269 (45%), Gaps = 29/269 (10%)
Query: 88 ELGRGEFGITHQCFEIETGETYACKKI-----AKEKLKTEIDIDDVRREVEIMRHLPKHP 142
ELGRG +G+ + + +G+ A K+I ++E+ + +D+D R V+ P
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDC-------P 110
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGG--ELFDRIVNKGH-YTERAAAAVGKTILRIVKVCH 199
VT+ A + +++ MEL + + + ++++KG E + +I++ ++ H
Sbjct: 111 FTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH 170
Query: 200 EN-GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF-----KPGEQFCEIVGSPYYMAP 253
V+HRD+KP N L + Q+K DFG+S + K + C+ +P + P
Sbjct: 171 SKLSVIHRDVKPSNVLI---NALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINP 227
Query: 254 EVLRRNYGPEIDVWSAGVIIYILLCGVPPF--WAETEEGIAHAIIRGKIDFERDPWPKVS 311
E+ ++ Y + D+WS G+ + L P+ W + + + D K S
Sbjct: 228 ELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPAD---KFS 284
Query: 312 KEAKELVKNMLDPNPYNRLTLEEVLENPW 340
E + L N R T E++++P+
Sbjct: 285 AEFVDFTSQCLKKNSKERPTYPELMQHPF 313
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 135/304 (44%), Gaps = 45/304 (14%)
Query: 89 LGRGEFGITHQCFEIETGETYACKKI-AKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
L G F ++ ++ +G YA K++ + E+ K I +EV M+ L HPNIV +
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAII----QEVCFMKKLSGHPNIVQF 91
Query: 148 -------KEAYEDKDAIYLVM-ELCEGG--ELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
KE + A +L++ ELC+G E ++ ++G + + R V+
Sbjct: 92 CSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQH 151
Query: 198 CHEN--GVMHRDLKPENFLFADGSENSQLKAIDFG--LSIFFKPGEQFC---------EI 244
H ++HRDLK EN L S +K DFG +I P + EI
Sbjct: 152 MHRQKPPIIHRDLKVENLLL---SNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEI 208
Query: 245 V--GSPYYMAPEV--LRRNY--GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRG 298
+P Y PE+ L N+ G + D+W+ G I+Y+L PF E+G I+ G
Sbjct: 209 TRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPF----EDGAKLRIVNG 264
Query: 299 KIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTS 358
K + P L++ ML NP RL++ EV+ ++ A NV+ +T
Sbjct: 265 K--YSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQ--LQEIAAARNVNPKSPITE 320
Query: 359 RIKQ 362
++Q
Sbjct: 321 LLEQ 324
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 128/261 (49%), Gaps = 12/261 (4%)
Query: 83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
+T +++G+G FG + + T + A K I + + E +I+D+++E+ ++ P
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKII--DLEEAEDEIEDIQQEITVLSQC-DSP 85
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
+ Y +Y ++++ME GG D ++ G E A + + IL+ + H
Sbjct: 86 YVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEK 144
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-QFCEIVGSPYYMAPEVLRRN-Y 260
+HRD+K N L SE+ ++K DFG++ + + VG+P++MAPEV++++ Y
Sbjct: 145 KIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAY 201
Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
+ D+WS G+ L G PP + I + + SK KE V+
Sbjct: 202 DSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNY---SKPLKEFVEA 258
Query: 321 MLDPNPYNRLTLEEVLENPWI 341
L+ P R T +E+L++ +I
Sbjct: 259 CLNKEPSFRPTAKELLKHKFI 279
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 127/259 (49%), Gaps = 20/259 (7%)
Query: 89 LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
+G+G FG ++ + T E A K I + + E +I+D+++E+ ++ P I Y
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKII--DLEEAEDEIEDIQQEITVLSQC-DSPYITRYF 83
Query: 149 EAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDL 208
+Y ++++ME GG D ++ G E A + + IL+ + H +HRD+
Sbjct: 84 GSYLKSTKLWIIMEYLGGGSALD-LLKPGPLEETYIATILREILKGLDYLHSERKIHRDI 142
Query: 209 KPENFLFADGSENSQLKAIDFGLSIFFKPGE-QFCEIVGSPYYMAPEVLRRN-YGPEIDV 266
K N L SE +K DFG++ + + VG+P++MAPEV++++ Y + D+
Sbjct: 143 KAANVLL---SEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADI 199
Query: 267 WSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV----SKEAKELVKNML 322
WS G+ L G PP H +R ++ P + SK KE V+ L
Sbjct: 200 WSLGITAIELAKGEPP------NSDLHP-MRVLFLIPKNSPPTLEGQHSKPFKEFVEACL 252
Query: 323 DPNPYNRLTLEEVLENPWI 341
+ +P R T +E+L++ +I
Sbjct: 253 NKDPRFRPTAKELLKHKFI 271
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 38/187 (20%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
IL+ + CH G+MHRD+KP N L E+ +L+ ID+GL+ F+ PG+++ V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVLI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWA---ETEEGIAHAIIRG------- 298
PE+L + Y +D+WS G ++ ++ PF+ ++ + A + G
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 299 --KIDFERDP-------------WPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
K + E DP W + VS EA + + +L + +RLT E
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 335 VLENPWI 341
+E+P+
Sbjct: 318 AMEHPYF 324
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 138/329 (41%), Gaps = 53/329 (16%)
Query: 58 VDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKE 117
+ K + Q SV + +L +Y K +G G GI ++ A KK+++
Sbjct: 1 MSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 60
Query: 118 KLKTEIDIDDVRREVEIMRHLPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFD 171
+ + RE+ +M+ + H NI+ T ++ E+ +YLVMEL +
Sbjct: 61 -FQNQTHAKRAYRELVLMKXV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LX 116
Query: 172 RIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL 231
+++ ER + + + + I K H G++HRDLKP N + + LK +DFGL
Sbjct: 117 QVIQMELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGL 172
Query: 232 SIFFKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVII----------------- 273
+ V + YY APEV L Y +D+WS G I+
Sbjct: 173 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
Query: 274 ----YILLCGVP-PFWAETEEGIAHAIIRGKIDFERDPWPKV----------------SK 312
I G P P + + + + + + +PK+ +
Sbjct: 233 QWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKAS 292
Query: 313 EAKELVKNMLDPNPYNRLTLEEVLENPWI 341
+A++L+ ML +P R+++++ L++P+I
Sbjct: 293 QARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYA--CKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
T G+ +G G FG ++ G+ + K+ T + + EV ++R +H
Sbjct: 27 TVGQRIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRH 79
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCHE 200
NI+ + Y K + +V + CEG L+ + ++ + + + + R + H
Sbjct: 80 VNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 138
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSI---FFKPGEQFCEIVGSPYYMAPEVLR 257
++HRDLK N E++ +K DFGL+ + QF ++ GS +MAPEV+R
Sbjct: 139 KSIIHRDLKSNNIFL---HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 195
Query: 258 RN----YGPEIDVWSAGVIIYILLCGVPPF 283
Y + DV++ G+++Y L+ G P+
Sbjct: 196 MQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 131/295 (44%), Gaps = 37/295 (12%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP-- 139
+Y E+G G +G + +++ G + K + + E REV ++RHL
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 140 KHPNIVTYKE----AYEDKDA-IYLVMELCEG--GELFDRIVNKGHYTERAAAAVGKTIL 192
+HPN+V + + D++ + LV E + D++ G TE + + +L
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ-LL 130
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMA 252
R + H + V+HRDLKP+N L + + Q+K DFGL+ + +V + +Y A
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADFGLARIYSFQMALTSVVVTLWYRA 187
Query: 253 PEV-LRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAI-----IRGKIDFERD- 305
PEV L+ +Y +D+WS G I + P F ++ I + G+ D+ RD
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV 247
Query: 306 -------------PWPKVSKEAKELVKNM----LDPNPYNRLTLEEVLENPWIKN 343
P K + EL K++ L NP R++ L +P+ ++
Sbjct: 248 ALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD 302
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 128/261 (49%), Gaps = 12/261 (4%)
Query: 83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
+T +++G+G FG + + T + A K I + + E +I+D+++E+ ++ P
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKII--DLEEAEDEIEDIQQEITVLSQC-DSP 65
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
+ Y +Y ++++ME GG D ++ G E A + + IL+ + H
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEK 124
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-QFCEIVGSPYYMAPEVLRRN-Y 260
+HRD+K N L SE+ ++K DFG++ + + VG+P++MAPEV++++ Y
Sbjct: 125 KIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAY 181
Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
+ D+WS G+ L G PP + I + + SK KE V+
Sbjct: 182 DSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNY---SKPLKEFVEA 238
Query: 321 MLDPNPYNRLTLEEVLENPWI 341
L+ P R T +E+L++ +I
Sbjct: 239 CLNKEPSFRPTAKELLKHKFI 259
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 139/329 (42%), Gaps = 53/329 (16%)
Query: 58 VDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKE 117
+ K + Q SV + +L +Y K +G G GI ++ A KK+++
Sbjct: 1 MSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR- 59
Query: 118 KLKTEIDIDDVRREVEIMRHLPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFD 171
+ + RE+ +M+ + H NI+ T ++ E+ +YLVMEL +
Sbjct: 60 PFQNQTHAKRAYRELVLMKXV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LX 116
Query: 172 RIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL 231
+++ ER + + + +L +K H G++HRDLKP N + + LK +DFGL
Sbjct: 117 QVIQMELDHERMSYLLYQ-MLXGIKHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGL 172
Query: 232 SIFFKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVII----------------- 273
+ V + YY APEV L Y +D+WS G I+
Sbjct: 173 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
Query: 274 ----YILLCGVP-PFWAETEEGIAHAIIRGKIDFERDPWPKV----------------SK 312
I G P P + + + + + + +PK+ +
Sbjct: 233 QWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKAS 292
Query: 313 EAKELVKNMLDPNPYNRLTLEEVLENPWI 341
+A++L+ ML +P R+++++ L++P+I
Sbjct: 293 QARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 128/261 (49%), Gaps = 12/261 (4%)
Query: 83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
+T +++G+G FG + + T + A K I + + E +I+D+++E+ ++ P
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKII--DLEEAEDEIEDIQQEITVLSQC-DSP 65
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
+ Y +Y ++++ME GG D ++ G E A + + IL+ + H
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEK 124
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-QFCEIVGSPYYMAPEVLRRN-Y 260
+HRD+K N L SE+ ++K DFG++ + + VG+P++MAPEV++++ Y
Sbjct: 125 KIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAY 181
Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
+ D+WS G+ L G PP + I + + SK KE V+
Sbjct: 182 DSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNY---SKPLKEFVEA 238
Query: 321 MLDPNPYNRLTLEEVLENPWI 341
L+ P R T +E+L++ +I
Sbjct: 239 CLNKEPSFRPTAKELLKHKFI 259
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 130/294 (44%), Gaps = 37/294 (12%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP-- 139
+Y E+G G +G + +++ G + K + + E REV ++RHL
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 140 KHPNIVTYKE----AYEDKDA-IYLVMELCEG--GELFDRIVNKGHYTERAAAAVGKTIL 192
+HPN+V + + D++ + LV E + D++ G TE + + +L
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ-LL 130
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMA 252
R + H + V+HRDLKP+N L + + Q+K DFGL+ + +V + +Y A
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADFGLARIYSFQMALTSVVVTLWYRA 187
Query: 253 PEV-LRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAI-----IRGKIDFERD- 305
PEV L+ +Y +D+WS G I + P F ++ I + G+ D+ RD
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV 247
Query: 306 -------------PWPKVSKEAKELVKNM----LDPNPYNRLTLEEVLENPWIK 342
P K + EL K++ L NP R++ L +P+ +
Sbjct: 248 ALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 131/283 (46%), Gaps = 24/283 (8%)
Query: 88 ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
ELG G G+ + +G A +K+ ++K I + + RE++++ H P IV +
Sbjct: 32 ELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIR-NQIIRELQVL-HECNSPYIVGF 88
Query: 148 KEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE-NGVMHR 206
A+ I + ME +GG L + G E+ V +++ + E + +MHR
Sbjct: 89 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 148
Query: 207 DLKPENFLFADGSENSQLKAIDFGLS--IFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPE 263
D+KP N L + ++K DFG+S + F VG+ YM+PE L+ +Y +
Sbjct: 149 DVKPSNILV---NSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMSPERLQGTHYSVQ 202
Query: 264 IDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDF-ERDPWPKV-----SKEAKEL 317
D+WS G+ + + G P + G I +D+ +P PK+ S E ++
Sbjct: 203 SDIWSMGLSLVEMAVGRYPIGS----GSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDF 258
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRI 360
V L NP R L++++ + +IK + A V G + S I
Sbjct: 259 VNKCLIKNPAERADLKQLMVHAFIKRSD-AEEVDFAGWLCSTI 300
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 109/229 (47%), Gaps = 19/229 (8%)
Query: 69 SVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDV 128
S V P + ++ +Y K +G+G FG + ++ + + A K + EK +++
Sbjct: 86 SYVQVPHD-HVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEI 144
Query: 129 RREVEIMRHLPKHP-----NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERA 183
R I+ HL K N++ E + ++ I + EL L++ ++ K + +
Sbjct: 145 R----ILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYE-LIKKNKFQGFS 198
Query: 184 AAAVGK---TILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ 240
V K +IL+ + H+N ++H DLKPEN L S +K IDFG S + ++
Sbjct: 199 LPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGR-SGIKVIDFGSSCY--EHQR 255
Query: 241 FCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
+ S +Y APEV L YG ID+WS G I+ LL G P E E
Sbjct: 256 VYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE 304
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 109/229 (47%), Gaps = 19/229 (8%)
Query: 69 SVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDV 128
S V P + ++ +Y K +G+G FG + ++ + + A K + EK +++
Sbjct: 86 SYVQVPHD-HVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEI 144
Query: 129 RREVEIMRHLPKHP-----NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERA 183
R I+ HL K N++ E + ++ I + EL L++ ++ K + +
Sbjct: 145 R----ILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYE-LIKKNKFQGFS 198
Query: 184 AAAVGK---TILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ 240
V K +IL+ + H+N ++H DLKPEN L S +K IDFG S + ++
Sbjct: 199 LPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGR-SGIKVIDFGSSCY--EHQR 255
Query: 241 FCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
+ S +Y APEV L YG ID+WS G I+ LL G P E E
Sbjct: 256 VYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE 304
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 38/187 (20%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
IL+ + CH G+MHRD+KP N + E+ +L+ ID+GL+ F+ PG+++ V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWA---ETEEGIAHAIIRG------- 298
PE+L + Y +D+WS G ++ ++ PF+ ++ + A + G
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 299 --KIDFERDP-------------WPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
K + E DP W + VS EA + + +L + +RLT E
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 335 VLENPWI 341
+E+P+
Sbjct: 318 AMEHPYF 324
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 38/187 (20%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
IL+ + CH G+MHRD+KP N + E+ +L+ ID+GL+ F+ PG+++ V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWA---ETEEGIAHAIIRG------- 298
PE+L + Y +D+WS G ++ ++ PF+ ++ + A + G
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 299 --KIDFERDP-------------WPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
K + E DP W + VS EA + + +L + +RLT E
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 335 VLENPWI 341
+E+P+
Sbjct: 318 AMEHPYF 324
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 38/187 (20%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
IL+ + CH G+MHRD+KP N + E+ +L+ ID+GL+ F+ PG+++ V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWA---ETEEGIAHAIIRG------- 298
PE+L + Y +D+WS G ++ ++ PF+ ++ + A + G
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 299 --KIDFERDP-------------WPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
K + E DP W + VS EA + + +L + +RLT E
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 335 VLENPWI 341
+E+P+
Sbjct: 318 AMEHPYF 324
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 109/229 (47%), Gaps = 19/229 (8%)
Query: 69 SVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDV 128
S V P + ++ +Y K +G+G FG + ++ + + A K + EK +++
Sbjct: 86 SYVQVPHD-HVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEI 144
Query: 129 RREVEIMRHLPKHP-----NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERA 183
R I+ HL K N++ E + ++ I + EL L++ ++ K + +
Sbjct: 145 R----ILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYE-LIKKNKFQGFS 198
Query: 184 AAAVGK---TILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ 240
V K +IL+ + H+N ++H DLKPEN L S +K IDFG S + ++
Sbjct: 199 LPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGR-SGIKVIDFGSSCY--EHQR 255
Query: 241 FCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
+ S +Y APEV L YG ID+WS G I+ LL G P E E
Sbjct: 256 VYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE 304
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 38/187 (20%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
IL+ + CH G+MHRD+KP N + E+ +L+ ID+GL+ F+ PG+++ V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWA---ETEEGIAHAIIRG------- 298
PE+L + Y +D+WS G ++ ++ PF+ ++ + A + G
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 299 --KIDFERDP-------------WPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
K + E DP W + VS EA + + +L + +RLT E
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 335 VLENPWI 341
+E+P+
Sbjct: 318 AMEHPYF 324
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 38/187 (20%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
IL+ + CH G+MHRD+KP N + E+ +L+ ID+GL+ F+ PG+++ V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWA---ETEEGIAHAIIRG------- 298
PE+L + Y +D+WS G ++ ++ PF+ ++ + A + G
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 299 --KIDFERDP-------------WPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
K + E DP W + VS EA + + +L + +RLT E
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 335 VLENPWI 341
+E+P+
Sbjct: 318 AMEHPYF 324
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 38/187 (20%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
IL+ + CH G+MHRD+KP N + E+ +L+ ID+GL+ F+ PG+++ V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWA---ETEEGIAHAIIRG------- 298
PE+L + Y +D+WS G ++ ++ PF+ ++ + A + G
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 299 --KIDFERDP-------------WPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
K + E DP W + VS EA + + +L + +RLT E
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 335 VLENPWI 341
+E+P+
Sbjct: 318 AMEHPYF 324
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 38/187 (20%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
IL+ + CH G+MHRD+KP N + E+ +L+ ID+GL+ F+ PG+++ V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWA---ETEEGIAHAIIRG------- 298
PE+L + Y +D+WS G ++ ++ PF+ ++ + A + G
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 299 --KIDFERDP-------------WPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
K + E DP W + VS EA + + +L + +RLT E
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 335 VLENPWI 341
+E+P+
Sbjct: 318 AMEHPYF 324
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 38/187 (20%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
IL+ + CH G+MHRD+KP N + E+ +L+ ID+GL+ F+ PG+++ V S Y+
Sbjct: 139 ILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 196
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWA---ETEEGIAHAIIRG------- 298
PE+L + Y +D+WS G ++ ++ PF+ ++ + A + G
Sbjct: 197 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 256
Query: 299 --KIDFERDP-------------WPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
K + E DP W + VS EA + + +L + +RLT E
Sbjct: 257 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 316
Query: 335 VLENPWI 341
+E+P+
Sbjct: 317 AMEHPYF 323
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 138/329 (41%), Gaps = 53/329 (16%)
Query: 58 VDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKE 117
+ K + Q SV + +L +Y K +G G GI ++ A KK+++
Sbjct: 1 MSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 60
Query: 118 KLKTEIDIDDVRREVEIMRHLPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFD 171
+ + RE+ +M+ + H NI+ T ++ E+ +YLVMEL +
Sbjct: 61 -FQNQTHAKRAYRELVLMKXV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LC 116
Query: 172 RIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL 231
+++ ER + + + + I K H G++HRDLKP N + + LK +DFGL
Sbjct: 117 QVIQMELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGL 172
Query: 232 SIFFKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVII----------------- 273
+ V + YY APEV L Y +D+WS G I+
Sbjct: 173 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
Query: 274 ----YILLCGVP-PFWAETEEGIAHAIIRGKIDFERDPWPKV----------------SK 312
I G P P + + + + + + +PK+ +
Sbjct: 233 QWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKAS 292
Query: 313 EAKELVKNMLDPNPYNRLTLEEVLENPWI 341
+A++L+ ML +P R+++++ L++P+I
Sbjct: 293 QARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 123/269 (45%), Gaps = 29/269 (10%)
Query: 88 ELGRGEFGITHQCFEIETGETYACKKI-----AKEKLKTEIDIDDVRREVEIMRHLPKHP 142
ELGRG +G+ + + +G+ A K+I ++E+ + +D+D R V+ P
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDC-------P 66
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGG--ELFDRIVNKGH-YTERAAAAVGKTILRIVKVCH 199
VT+ A + +++ MEL + + + ++++KG E + +I++ ++ H
Sbjct: 67 FTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH 126
Query: 200 EN-GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF-----KPGEQFCEIVGSPYYMAP 253
V+HRD+KP N L + Q+K DFG+S + K + C+ +P + P
Sbjct: 127 SKLSVIHRDVKPSNVLI---NALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINP 183
Query: 254 EVLRRNYGPEIDVWSAGVIIYILLCGVPPF--WAETEEGIAHAIIRGKIDFERDPWPKVS 311
E+ ++ Y + D+WS G+ + L P+ W + + + D K S
Sbjct: 184 ELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPAD---KFS 240
Query: 312 KEAKELVKNMLDPNPYNRLTLEEVLENPW 340
E + L N R T E++++P+
Sbjct: 241 AEFVDFTSQCLKKNSKERPTYPELMQHPF 269
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 38/187 (20%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
IL+ + CH G+MHRD+KP N + E+ +L+ ID+GL+ F+ PG+++ V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWA---ETEEGIAHAIIRG------- 298
PE+L + Y +D+WS G ++ ++ PF+ ++ + A + G
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 299 --KIDFERDP-------------WPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
K + E DP W + VS EA + + +L + +RLT E
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 335 VLENPWI 341
+E+P+
Sbjct: 318 AMEHPYF 324
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 38/187 (20%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
IL+ + CH G+MHRD+KP N + E+ +L+ ID+GL+ F+ PG+++ V S Y+
Sbjct: 139 ILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 196
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWA---ETEEGIAHAIIRG------- 298
PE+L + Y +D+WS G ++ ++ PF+ ++ + A + G
Sbjct: 197 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 256
Query: 299 --KIDFERDP-------------WPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
K + E DP W + VS EA + + +L + +RLT E
Sbjct: 257 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 316
Query: 335 VLENPWI 341
+E+P+
Sbjct: 317 AMEHPYF 323
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 38/187 (20%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
IL+ + CH G+MHRD+KP N + E+ +L+ ID+GL+ F+ PG+++ V S Y+
Sbjct: 138 ILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 195
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWA---ETEEGIAHAIIRG------- 298
PE+L + Y +D+WS G ++ ++ PF+ ++ + A + G
Sbjct: 196 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 255
Query: 299 --KIDFERDP-------------WPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
K + E DP W + VS EA + + +L + +RLT E
Sbjct: 256 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 315
Query: 335 VLENPWI 341
+E+P+
Sbjct: 316 AMEHPYF 322
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 139/329 (42%), Gaps = 53/329 (16%)
Query: 58 VDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKE 117
+ K + Q SV + +L +Y K +G G GI ++ A KK+++
Sbjct: 1 MSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR- 59
Query: 118 KLKTEIDIDDVRREVEIMRHLPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFD 171
+ + RE+ +M+ + H NI+ T ++ E+ +YLVMEL +
Sbjct: 60 PFQNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LX 116
Query: 172 RIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL 231
+++ ER + + + +L +K H G++HRDLKP N + + LK +DFGL
Sbjct: 117 QVIQMELDHERMSYLLYQ-MLXGIKHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGL 172
Query: 232 SIFFKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVII----------------- 273
+ V + YY APEV L Y +D+WS G I+
Sbjct: 173 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
Query: 274 ----YILLCGVP-PFWAETEEGIAHAIIRGKIDFERDPWPKV----------------SK 312
I G P P + + + + + + +PK+ +
Sbjct: 233 QWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKAS 292
Query: 313 EAKELVKNMLDPNPYNRLTLEEVLENPWI 341
+A++L+ ML +P R+++++ L++P+I
Sbjct: 293 QARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 101/209 (48%), Gaps = 15/209 (7%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
+L +Y K +G G GI ++ A KK+++ + + RE+ +M+
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMK- 78
Query: 138 LPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
+ H NI+ T +++ E+ +Y+VMEL + +++ ER + + + +
Sbjct: 79 VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQML 136
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
+ I K H G++HRDLKP N + ++ LK +DFGL+ V + YY
Sbjct: 137 VGI-KHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 252 APEV-LRRNYGPEIDVWSAGVIIYILLCG 279
APEV L Y +D+WS GVI+ ++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 38/187 (20%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
IL+ + CH G+MHRD+KP N + E+ +L+ ID+GL+ F+ PG+++ V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWA---ETEEGIAHAIIRG------- 298
PE+L + Y +D+WS G ++ ++ PF+ ++ + A + G
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 299 --KIDFERDP-------------WPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
K + E DP W + VS EA + + +L + +RLT E
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 335 VLENPWI 341
+E+P+
Sbjct: 318 AMEHPYF 324
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 38/187 (20%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
IL+ + CH G+MHRD+KP N + E+ +L+ ID+GL+ F+ PG+++ V S Y+
Sbjct: 145 ILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 202
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWA---ETEEGIAHAIIRG------- 298
PE+L + Y +D+WS G ++ ++ PF+ ++ + A + G
Sbjct: 203 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 262
Query: 299 --KIDFERDP-------------WPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
K + E DP W + VS EA + + +L + +RLT E
Sbjct: 263 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 322
Query: 335 VLENPWI 341
+E+P+
Sbjct: 323 AMEHPYF 329
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 98/203 (48%), Gaps = 15/203 (7%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
+L +Y K +G G GI ++ A KK+++ + + RE+ +M+
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMK- 78
Query: 138 LPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
+ H NI+ T +++ E+ +Y+VMEL + +++ ER + + + +
Sbjct: 79 VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQML 136
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
+ I K H G++HRDLKP N + ++ LK +DFGL+ V + YY
Sbjct: 137 VGI-KHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 252 APEV-LRRNYGPEIDVWSAGVII 273
APEV L Y +D+WS GVI+
Sbjct: 193 APEVILGMGYKENVDIWSVGVIM 215
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 124/284 (43%), Gaps = 37/284 (13%)
Query: 89 LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
LGRG FG H+ + +TG A KK+ E + E E+ L P IV
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE--------ELMACAGL-TSPRIVPLY 132
Query: 149 EAYEDKDAIYLVMELCEGGELFDRIVNKGHYTE-RAAAAVGKTILRIVKVCHENGVMHRD 207
A + + + MEL EGG L + +G E RA +G+ L ++ H ++H D
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQA-LEGLEYLHSRRILHGD 191
Query: 208 LKPENFLFADGSENSQLKAIDFGLSIFFKP---GEQFCE---IVGSPYYMAPE-VLRRNY 260
+K +N L + S+ S DFG ++ +P G+ I G+ +MAPE VL R+
Sbjct: 192 VKADNVLLS--SDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSC 249
Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
++DVWS+ ++ +L G P W + G I + R+ P + + ++
Sbjct: 250 DAKVDVWSSCCMMLHMLNGCHP-WTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQE 308
Query: 321 MLDPNPYNRLTLEEV-------------LENPW---IKNDNHAP 348
L P +R++ E+ L++PW K H P
Sbjct: 309 GLRKEPIHRVSAAELGGKVNRALQQVGGLKSPWRGEYKEPRHPP 352
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 129/304 (42%), Gaps = 46/304 (15%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP-- 139
+Y E+G G +G ++ + +G A K + + + I VR EV ++R L
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVR-EVALLRRLEAF 63
Query: 140 KHPNIVTYKE----AYEDKDA-IYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGKTIL 192
+HPN+V + + D++ + LV E + D+ G E + + L
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE-TIKDLMRQFL 122
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMA 252
R + H N ++HRDLKPEN L G +K DFGL+ + +V + +Y A
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSG---GTVKLADFGLARIYSYQMALAPVVVTLWYRA 179
Query: 253 PEV-LRRNYGPEIDVWSAGVIIY------ILLC---------------GVPPFWAETEEG 290
PEV L+ Y +D+WS G I L C G+PP E +
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP---EDDWP 236
Query: 291 IAHAIIRGKIDFERDP------WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND 344
++ RG R P P++ + +L+ ML NP+ R++ L++ ++ D
Sbjct: 237 RDVSLPRGAFP-PRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKD 295
Query: 345 NHAP 348
P
Sbjct: 296 EGNP 299
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 137/327 (41%), Gaps = 53/327 (16%)
Query: 60 KKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKL 119
K + Q SV + +L +Y K +G G GI ++ A KK+++
Sbjct: 4 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PF 62
Query: 120 KTEIDIDDVRREVEIMRHLPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRI 173
+ + RE+ +M+ + H NI+ T ++ E+ +YLVMEL + ++
Sbjct: 63 QNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQV 119
Query: 174 VNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI 233
+ ER + + + + I K H G++HRDLKP N + + LK +DFGL+
Sbjct: 120 IQMELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLAR 175
Query: 234 FFKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVII------------------- 273
V + YY APEV L Y +D+WS G I+
Sbjct: 176 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW 235
Query: 274 --YILLCGVP-PFWAETEEGIAHAIIRGKIDFERDPWPKV----------------SKEA 314
I G P P + + + + + + +PK+ + +A
Sbjct: 236 NKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQA 295
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWI 341
++L+ ML +P R+++++ L++P+I
Sbjct: 296 RDLLSKMLVIDPAKRISVDDALQHPYI 322
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 126/287 (43%), Gaps = 47/287 (16%)
Query: 89 LGRGEFGITHQCFEIETGETYACKKI--AKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
LG+G FG + YA KKI +EKL T + EV ++ L H +V
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLST------ILSEVMLLASL-NHQYVVR 66
Query: 147 YKEAY-------------EDKDAIYLVMELCEGGELFDRIVNKGHYTER-AAAAVGKTIL 192
Y A+ + K +++ ME CE L+D I ++ +R + + IL
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL 126
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-------------PG- 238
+ H G++HRDLKP N +F D S N +K DFGL+ PG
Sbjct: 127 EALSYIHSQGIIHRDLKPMN-IFIDESRN--VKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 239 -EQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEE-GIAHA 294
+ +G+ Y+A EVL +Y +ID++S G+I + ++ PF E I
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKK 240
Query: 295 IIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
+ I+F D K K++++ ++D +P R +L + W+
Sbjct: 241 LRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 136/321 (42%), Gaps = 53/321 (16%)
Query: 66 QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI 125
Q SV + +L +Y K +G G GI ++ A KK+++ + +
Sbjct: 2 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHA 60
Query: 126 DDVRREVEIMRHLPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHY 179
RE+ +M+ + H NI+ T ++ E+ +YLVMEL + +++
Sbjct: 61 KRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELD 117
Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
ER + + + +L +K H G++HRDLKP N + + LK +DFGL+
Sbjct: 118 HERMSYLLYQ-MLXGIKHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGLARTAGTSF 173
Query: 240 QFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVII---------------------YILL 277
V + YY APEV L Y +D+WS G I+ I
Sbjct: 174 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 233
Query: 278 CGVP-PFWAETEEGIAHAIIRGKIDFERDPWPKV----------------SKEAKELVKN 320
G P P + + + + + + +PK+ + +A++L+
Sbjct: 234 LGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSK 293
Query: 321 MLDPNPYNRLTLEEVLENPWI 341
ML +P R+++++ L++P+I
Sbjct: 294 MLVIDPAKRISVDDALQHPYI 314
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 137/327 (41%), Gaps = 53/327 (16%)
Query: 60 KKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKL 119
K + Q SV + +L +Y K +G G GI ++ A KK+++
Sbjct: 4 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PF 62
Query: 120 KTEIDIDDVRREVEIMRHLPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRI 173
+ + RE+ +M+ + H NI+ T ++ E+ +YLVMEL + ++
Sbjct: 63 QNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQV 119
Query: 174 VNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI 233
+ ER + + + + I K H G++HRDLKP N + + LK +DFGL+
Sbjct: 120 IQMELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLAR 175
Query: 234 FFKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVII------------------- 273
V + YY APEV L Y +D+WS G I+
Sbjct: 176 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW 235
Query: 274 --YILLCGVP-PFWAETEEGIAHAIIRGKIDFERDPWPKV----------------SKEA 314
I G P P + + + + + + +PK+ + +A
Sbjct: 236 NKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQA 295
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWI 341
++L+ ML +P R+++++ L++P+I
Sbjct: 296 RDLLSKMLVIDPAKRISVDDALQHPYI 322
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 21/210 (10%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYA--CKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
T G+ +G G FG ++ G+ + K+ T + + EV ++R +H
Sbjct: 27 TVGQRIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RH 79
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCHE 200
NI+ + Y + +V + CEG L+ + ++ + + + + R + H
Sbjct: 80 VNILLFM-GYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 138
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSI---FFKPGEQFCEIVGSPYYMAPEVLR 257
++HRDLK N E++ +K DFGL+ + QF ++ GS +MAPEV+R
Sbjct: 139 KSIIHRDLKSNNIFL---HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 195
Query: 258 RN----YGPEIDVWSAGVIIYILLCGVPPF 283
Y + DV++ G+++Y L+ G P+
Sbjct: 196 MQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 137/327 (41%), Gaps = 53/327 (16%)
Query: 60 KKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKL 119
K + Q SV + +L +Y K +G G GI ++ A KK+++
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PF 61
Query: 120 KTEIDIDDVRREVEIMRHLPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRI 173
+ + RE+ +M+ + H NI+ T ++ E+ +YLVMEL + ++
Sbjct: 62 QNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQV 118
Query: 174 VNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI 233
+ ER + + + + I K H G++HRDLKP N + + LK +DFGL+
Sbjct: 119 IQMELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLAR 174
Query: 234 FFKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVII------------------- 273
V + YY APEV L Y +D+WS G I+
Sbjct: 175 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW 234
Query: 274 --YILLCGVP-PFWAETEEGIAHAIIRGKIDFERDPWPKV----------------SKEA 314
I G P P + + + + + + +PK+ + +A
Sbjct: 235 NKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQA 294
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWI 341
++L+ ML +P R+++++ L++P+I
Sbjct: 295 RDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 138/329 (41%), Gaps = 53/329 (16%)
Query: 58 VDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKE 117
+ K + Q SV + +L +Y K +G G GI ++ A KK+++
Sbjct: 1 MSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR- 59
Query: 118 KLKTEIDIDDVRREVEIMRHLPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFD 171
+ + RE+ +M+ + H NI+ T ++ E+ +YLVMEL +
Sbjct: 60 PFQNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LC 116
Query: 172 RIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL 231
+++ ER + + + + I K H G++HRDLKP N + + LK +DFGL
Sbjct: 117 QVIQMELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGL 172
Query: 232 SIFFKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVII----------------- 273
+ V + YY APEV L Y +D+WS G I+
Sbjct: 173 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
Query: 274 ----YILLCGVP-PFWAETEEGIAHAIIRGKIDFERDPWPKV----------------SK 312
I G P P + + + + + + +PK+ +
Sbjct: 233 QWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKAS 292
Query: 313 EAKELVKNMLDPNPYNRLTLEEVLENPWI 341
+A++L+ ML +P R+++++ L++P+I
Sbjct: 293 QARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 137/327 (41%), Gaps = 53/327 (16%)
Query: 60 KKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKL 119
K + Q SV + +L +Y K +G G GI ++ A KK+++
Sbjct: 2 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PF 60
Query: 120 KTEIDIDDVRREVEIMRHLPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRI 173
+ + RE+ +M+ + H NI+ T ++ E+ +YLVMEL + ++
Sbjct: 61 QNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQV 117
Query: 174 VNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI 233
+ ER + + + + I K H G++HRDLKP N + + LK +DFGL+
Sbjct: 118 IQMELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLAR 173
Query: 234 FFKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVII------------------- 273
V + YY APEV L Y +D+WS G I+
Sbjct: 174 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW 233
Query: 274 --YILLCGVP-PFWAETEEGIAHAIIRGKIDFERDPWPKV----------------SKEA 314
I G P P + + + + + + +PK+ + +A
Sbjct: 234 NKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQA 293
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWI 341
++L+ ML +P R+++++ L++P+I
Sbjct: 294 RDLLSKMLVIDPAKRISVDDALQHPYI 320
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 99/228 (43%), Gaps = 38/228 (16%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
D Y +GRG +G + ++ T + A KK+ + + ID + RE+ I+ L
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNR-MFEDLIDCKRILREITILNRLKS 84
Query: 141 HPNIVTYKEAYEDK----DAIYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGKTILRI 194
I Y D D +Y+V+E+ + +LF + TE + +L
Sbjct: 85 DYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPI---FLTEEHIKTILYNLLLG 141
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF----------------KPG 238
HE+G++HRDLKP N L +++ +K DFGL+ +PG
Sbjct: 142 ENFIHESGIIHRDLKPANCLL---NQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPG 198
Query: 239 -------EQFCEIVGSPYYMAPE--VLRRNYGPEIDVWSAGVIIYILL 277
+Q V + +Y APE +L+ NY ID+WS G I LL
Sbjct: 199 PHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 27/37 (72%)
Query: 307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
+P +S + L+++ML NP R+T+++ L++P++K+
Sbjct: 331 YPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKD 367
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 132/274 (48%), Gaps = 21/274 (7%)
Query: 76 EGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREV 132
+ NI D +T + +G+G FG + + T + A K I + + E +I+D+++E+
Sbjct: 15 QNNIADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKII--DLEEAEDEIEDIQQEI 72
Query: 133 EIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL 192
++ + Y +Y ++++ME GG D ++ G + E A + K IL
Sbjct: 73 TVLSQC-DSSYVTKYYGSYLKGSKLWIIMEYLGGGSALD-LLRAGPFDEFQIATMLKEIL 130
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-QFCEIVGSPYYM 251
+ + H +HRD+K N L SE +K DFG++ + + VG+P++M
Sbjct: 131 KGLDYLHSEKKIHRDIKAANVLL---SEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWM 187
Query: 252 APEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
APEV++++ Y + D+WS G+ L G PP H + + + +P V
Sbjct: 188 APEVIQQSAYDSKADIWSLGITAIELAKGEPP------NSDMHPMRVLFLIPKNNPPTLV 241
Query: 311 ---SKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
+K KE + L+ +P R T +E+L++ +I
Sbjct: 242 GDFTKSFKEFIDACLNKDPSFRPTAKELLKHKFI 275
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 38/195 (19%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
+L+ + CH G+MHRD+KP N + E +L+ ID+GL+ F+ PG+++ V S Y+
Sbjct: 155 LLKALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 212
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE--------------EGIAHA 294
PE+L ++Y +D+WS G + ++ PF+ + +G+
Sbjct: 213 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAY 272
Query: 295 IIRGKIDFE-----------RDPWPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
+ + +I+ + R PW K VS EA + + +L + RLT E
Sbjct: 273 LNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALE 332
Query: 335 VLENPWIKNDNHAPN 349
+ +P+ + A N
Sbjct: 333 AMTHPYFQQVRAAEN 347
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 134/330 (40%), Gaps = 71/330 (21%)
Query: 77 GNILD-KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIM 135
G++L +Y LG G FG +C + + G + KI K + + R E++++
Sbjct: 9 GDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVK---NVDRYCEAARSEIQVL 65
Query: 136 RHL-PKHPN----IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERA--AAAVG 188
HL PN V E +E I +V EL G +D I G R +
Sbjct: 66 EHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMA 124
Query: 189 KTILRIVKVCHENGVMHRDLKPENFLF--ADGSE--------------NSQLKAIDFGLS 232
I + V H N + H DLKPEN LF +D +E N +K +DFG +
Sbjct: 125 YQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA 184
Query: 233 IFFKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVIIYILLCGVPPF-WAETEEG 290
+ E +V + +Y APEV L + DVWS G I+ G F +++E
Sbjct: 185 TY--DDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEH 242
Query: 291 IA-----------HAIIRGK----IDFERDPWPK-------VSKEAK------------- 315
+A H I + + +R W + VS+ K
Sbjct: 243 LAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEH 302
Query: 316 ----ELVKNMLDPNPYNRLTLEEVLENPWI 341
+L++ ML+ +P R+TL E L++P+
Sbjct: 303 ERLFDLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 129/304 (42%), Gaps = 46/304 (15%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP-- 139
+Y E+G G +G ++ + +G A K + + + I VR EV ++R L
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVR-EVALLRRLEAF 63
Query: 140 KHPNIVTYKE----AYEDKDA-IYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGKTIL 192
+HPN+V + + D++ + LV E + D+ G E + + L
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE-TIKDLMRQFL 122
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMA 252
R + H N ++HRDLKPEN L G +K DFGL+ + +V + +Y A
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSG---GTVKLADFGLARIYSYQMALFPVVVTLWYRA 179
Query: 253 PEV-LRRNYGPEIDVWSAGVIIY------ILLC---------------GVPPFWAETEEG 290
PEV L+ Y +D+WS G I L C G+PP E +
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP---EDDWP 236
Query: 291 IAHAIIRGKIDFERDP------WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND 344
++ RG R P P++ + +L+ ML NP+ R++ L++ ++ D
Sbjct: 237 RDVSLPRGAFP-PRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKD 295
Query: 345 NHAP 348
P
Sbjct: 296 EGNP 299
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 128/283 (45%), Gaps = 28/283 (9%)
Query: 88 ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
ELG G G+ + +G A +K+ ++K I + + RE++++ H P IV +
Sbjct: 16 ELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIR-NQIIRELQVL-HECNSPYIVGF 72
Query: 148 KEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE-NGVMHR 206
A+ I + ME +GG L + G E+ V +++ + E + +MHR
Sbjct: 73 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 132
Query: 207 DLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPEID 265
D+KP N L + ++K DFG+S E E VG+ YM+PE L+ +Y + D
Sbjct: 133 DVKPSNILV---NSRGEIKLCDFGVSGQLI-DEMANEFVGTRSYMSPERLQGTHYSVQSD 188
Query: 266 VWSAGVIIYILLCG---VPPFWAETEEGIAHAIIRGKIDFERDPWPKV-----SKEAKEL 317
+WS G+ + + G PP AI +P PK+ S E ++
Sbjct: 189 IWSMGLSLVEMAVGRYPRPPM----------AIFELLDYIVNEPPPKLPSAVFSLEFQDF 238
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRI 360
V L NP R L++++ + +IK + A V G + S I
Sbjct: 239 VNKCLIKNPAERADLKQLMVHAFIKRSD-AEEVDFAGWLCSTI 280
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 38/195 (19%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
+L+ + CH G+MHRD+KP N + E +L+ ID+GL+ F+ PG+++ V S Y+
Sbjct: 135 LLKALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 192
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE--------------EGIAHA 294
PE+L ++Y +D+WS G + ++ PF+ + +G+
Sbjct: 193 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVY 252
Query: 295 IIRGKIDFE-----------RDPWPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
+ + +I+ + R PW K VS EA + + +L + RLT E
Sbjct: 253 LNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALE 312
Query: 335 VLENPWIKNDNHAPN 349
+ +P+ + A N
Sbjct: 313 AMTHPYFQQVRAAEN 327
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 38/195 (19%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
+L+ + CH G+MHRD+KP N + E +L+ ID+GL+ F+ PG+++ V S Y+
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 191
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE--------------EGIAHA 294
PE+L ++Y +D+WS G + ++ PF+ + +G+
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVY 251
Query: 295 IIRGKIDFE-----------RDPWPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
+ + +I+ + R PW K VS EA + + +L + RLT E
Sbjct: 252 LNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALE 311
Query: 335 VLENPWIKNDNHAPN 349
+ +P+ + A N
Sbjct: 312 AMTHPYFQQVRAAEN 326
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 18/210 (8%)
Query: 89 LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
LG+G + +TG+ +A K +D+ RE E+++ L H NIV
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKL-NHKNIVKLF 73
Query: 149 EAYEDKDAIY--LVMELCEGGELFDRI---VNKGHYTERAAAAVGKTILRIVKVCHENGV 203
E+ + L+ME C G L+ + N E V + ++ + ENG+
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI 133
Query: 204 MHRDLKPENFLFADGSE-NSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-----VLR 257
+HR++KP N + G + S K DFG + + EQF + G+ Y+ P+ VLR
Sbjct: 134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERAVLR 193
Query: 258 RN----YGPEIDVWSAGVIIYILLCGVPPF 283
++ YG +D+WS GV Y G PF
Sbjct: 194 KDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 38/195 (19%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
+L+ + CH G+MHRD+KP N + E +L+ ID+GL+ F+ PG+++ V S Y+
Sbjct: 135 LLKALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 192
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE--------------EGIAHA 294
PE+L ++Y +D+WS G + ++ PF+ + +G+
Sbjct: 193 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVY 252
Query: 295 IIRGKIDFE-----------RDPWPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
+ + +I+ + R PW K VS EA + + +L + RLT E
Sbjct: 253 LNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALE 312
Query: 335 VLENPWIKNDNHAPN 349
+ +P+ + A N
Sbjct: 313 AMTHPYFQQVRAAEN 327
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 38/195 (19%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
+L+ + CH G+MHRD+KP N + E +L+ ID+GL+ F+ PG+++ V S Y+
Sbjct: 136 LLKALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 193
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE--------------EGIAHA 294
PE+L ++Y +D+WS G + ++ PF+ + +G+
Sbjct: 194 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVY 253
Query: 295 IIRGKIDFE-----------RDPWPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
+ + +I+ + R PW K VS EA + + +L + RLT E
Sbjct: 254 LNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALE 313
Query: 335 VLENPWIKNDNHAPN 349
+ +P+ + A N
Sbjct: 314 AMTHPYFQQVRAAEN 328
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 18/210 (8%)
Query: 89 LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
LG+G + +TG+ +A K +D+ RE E+++ L H NIV
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKL-NHKNIVKLF 73
Query: 149 EAYEDKDAIY--LVMELCEGGELFDRI---VNKGHYTERAAAAVGKTILRIVKVCHENGV 203
E+ + L+ME C G L+ + N E V + ++ + ENG+
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI 133
Query: 204 MHRDLKPENFLFADGSE-NSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-----VLR 257
+HR++KP N + G + S K DFG + + EQF + G+ Y+ P+ VLR
Sbjct: 134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLR 193
Query: 258 RN----YGPEIDVWSAGVIIYILLCGVPPF 283
++ YG +D+WS GV Y G PF
Sbjct: 194 KDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 135/321 (42%), Gaps = 53/321 (16%)
Query: 66 QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI 125
Q SV + +L +Y K +G G GI ++ A KK+++ + +
Sbjct: 3 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHA 61
Query: 126 DDVRREVEIMRHLPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHY 179
RE+ +M+ + H NI+ T ++ E+ +YLVMEL + +++
Sbjct: 62 KRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELD 118
Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
ER + + + + I K H G++HRDLKP N + + LK +DFGL+
Sbjct: 119 HERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSF 174
Query: 240 QFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVII---------------------YILL 277
V + YY APEV L Y +D+WS G I+ I
Sbjct: 175 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 234
Query: 278 CGVP-PFWAETEEGIAHAIIRGKIDFERDPWPKV----------------SKEAKELVKN 320
G P P + + + + + + +PK+ + +A++L+
Sbjct: 235 LGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSK 294
Query: 321 MLDPNPYNRLTLEEVLENPWI 341
ML +P R+++++ L++P+I
Sbjct: 295 MLVIDPAKRISVDDALQHPYI 315
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 127/300 (42%), Gaps = 38/300 (12%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP-- 139
+Y E+G G +G ++ + +G A K + + + I VR EV ++R L
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVR-EVALLRRLEAF 63
Query: 140 KHPNIVTYKE----AYEDKDA-IYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGKTIL 192
+HPN+V + + D++ + LV E + D+ G E + + L
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE-TIKDLMRQFL 122
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMA 252
R + H N ++HRDLKPEN L G +K DFGL+ + +V + +Y A
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSG---GTVKLADFGLARIYSYQMALDPVVVTLWYRA 179
Query: 253 PEV-LRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAI-----IRGKIDFERD- 305
PEV L+ Y +D+WS G I + P F +E I + + D+ RD
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDV 239
Query: 306 -----------------PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAP 348
P++ + +L+ ML NP+ R++ L++ ++ D P
Sbjct: 240 SLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNP 299
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 135/321 (42%), Gaps = 53/321 (16%)
Query: 66 QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI 125
Q SV + +L +Y K +G G GI ++ A KK+++ + +
Sbjct: 3 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHA 61
Query: 126 DDVRREVEIMRHLPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHY 179
RE+ +M+ + H NI+ T ++ E+ +YLVMEL + +++
Sbjct: 62 KRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELD 118
Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
ER + + + + I K H G++HRDLKP N + + LK +DFGL+
Sbjct: 119 HERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSF 174
Query: 240 QFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVII---------------------YILL 277
V + YY APEV L Y +D+WS G I+ I
Sbjct: 175 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 234
Query: 278 CGVP-PFWAETEEGIAHAIIRGKIDFERDPWPKV----------------SKEAKELVKN 320
G P P + + + + + + +PK+ + +A++L+
Sbjct: 235 LGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSK 294
Query: 321 MLDPNPYNRLTLEEVLENPWI 341
ML +P R+++++ L++P+I
Sbjct: 295 MLVIDPAKRISVDDALQHPYI 315
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 121/273 (44%), Gaps = 34/273 (12%)
Query: 89 LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
LGRG FG H+ + +TG A KK+ E + E E+ L P IV
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE--------ELMACAGL-TSPRIVPLY 151
Query: 149 EAYEDKDAIYLVMELCEGGELFDRIVNKGHYTE-RAAAAVGKTILRIVKVCHENGVMHRD 207
A + + + MEL EGG L + +G E RA +G+ L ++ H ++H D
Sbjct: 152 GAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQA-LEGLEYLHSRRILHGD 210
Query: 208 LKPENFLFADGSENSQLKAIDFGLSIFFKP---GEQFCE---IVGSPYYMAPE-VLRRNY 260
+K +N L + S+ S DFG ++ +P G+ I G+ +MAPE VL R+
Sbjct: 211 VKADNVLLS--SDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSC 268
Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
++DVWS+ ++ +L G P W + G I + R+ P + + ++
Sbjct: 269 DAKVDVWSSCCMMLHMLNGCHP-WTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQE 327
Query: 321 MLDPNPYNRLTLEEV-------------LENPW 340
L P +R++ E+ L++PW
Sbjct: 328 GLRKEPIHRVSAAELGGKVNRALQQVGGLKSPW 360
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 38/195 (19%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
+L+ + CH G+MHRD+KP N + E +L+ ID+GL+ F+ PG+++ V S Y+
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 191
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE--------------EGIAHA 294
PE+L ++Y +D+WS G + ++ PF+ + +G+
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVY 251
Query: 295 IIRGKIDFE-----------RDPWPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
+ + +I+ + R PW K VS EA + + +L + RLT E
Sbjct: 252 LNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALE 311
Query: 335 VLENPWIKNDNHAPN 349
+ +P+ + A N
Sbjct: 312 AMTHPYFQQVRAAEN 326
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 38/195 (19%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
+L+ + CH G+MHRD+KP N + E +L+ ID+GL+ F+ PG+++ V S Y+
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 191
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE--------------EGIAHA 294
PE+L ++Y +D+WS G + ++ PF+ + +G+
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVY 251
Query: 295 IIRGKIDFE-----------RDPWPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
+ + +I+ + R PW K VS EA + + +L + RLT E
Sbjct: 252 LNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALE 311
Query: 335 VLENPWIKNDNHAPN 349
+ +P+ + A N
Sbjct: 312 AMTHPYFQQVRAAEN 326
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 135/321 (42%), Gaps = 53/321 (16%)
Query: 66 QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI 125
Q SV + +L +Y K +G G GI ++ A KK+++ + +
Sbjct: 2 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHA 60
Query: 126 DDVRREVEIMRHLPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHY 179
RE+ +M+ + H NI+ T ++ E+ +YLVMEL + +++
Sbjct: 61 KRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELD 117
Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
ER + + + + I K H G++HRDLKP N + + LK +DFGL+
Sbjct: 118 HERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSF 173
Query: 240 QFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVII---------------------YILL 277
V + YY APEV L Y +D+WS G I+ I
Sbjct: 174 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 233
Query: 278 CGVP-PFWAETEEGIAHAIIRGKIDFERDPWPKV----------------SKEAKELVKN 320
G P P + + + + + + +PK+ + +A++L+
Sbjct: 234 LGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSK 293
Query: 321 MLDPNPYNRLTLEEVLENPWI 341
ML +P R+++++ L++P+I
Sbjct: 294 MLVIDPAKRISVDDALQHPYI 314
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 38/195 (19%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
+L+ + CH G+MHRD+KP N + E +L+ ID+GL+ F+ PG+++ V S Y+
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 191
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE--------------EGIAHA 294
PE+L ++Y +D+WS G + ++ PF+ + +G+
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVY 251
Query: 295 IIRGKIDFE-----------RDPWPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
+ + +I+ + R PW K VS EA + + +L + RLT E
Sbjct: 252 LNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALE 311
Query: 335 VLENPWIKNDNHAPN 349
+ +P+ + A N
Sbjct: 312 AMTHPYFQQVRAAEN 326
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 38/195 (19%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
+L+ + CH G+MHRD+KP N + E +L+ ID+GL+ F+ PG+++ V S Y+
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 191
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE--------------EGIAHA 294
PE+L ++Y +D+WS G + ++ PF+ + +G+
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVY 251
Query: 295 IIRGKIDFE-----------RDPWPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
+ + +I+ + R PW K VS EA + + +L + RLT E
Sbjct: 252 LNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALE 311
Query: 335 VLENPWIKNDNHAPN 349
+ +P+ + A N
Sbjct: 312 AMTHPYFQQVRAAEN 326
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
+L +Y K +G G GI ++ A KK+++ + + RE+ +M+
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMK- 78
Query: 138 LPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
+ H NI+ T +++ E+ +Y+VMEL + +++ ER + + + +
Sbjct: 79 VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQML 136
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
+ I K H G++HRDLKP N + ++ LK +DFGL+ V + YY
Sbjct: 137 VGI-KHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 252 APEV-LRRNYGPEIDVWSAGVII 273
APEV L Y +D+WS G I+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIM 215
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 125/290 (43%), Gaps = 44/290 (15%)
Query: 89 LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIV--- 145
+G G +G + TG A KK+ + ++E+ RE+ +++H+ +H N++
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYR-PFQSELFAKRAYRELRLLKHM-RHENVIGLL 90
Query: 146 ---TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
T E +D YLVM G +++ E + +L+ ++ H G
Sbjct: 91 DVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAG 148
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRR--NY 260
++HRDLKP N +E+ +LK +DFGL+ + + V + +Y APEV+ Y
Sbjct: 149 IIHRDLKPGNLAV---NEDCELKILDFGLA--RQADSEMXGXVVTRWYRAPEVILNWMRY 203
Query: 261 GPEIDVWSAGVIIYILL---------------------CGVPP--FWAETEEGIAHAIIR 297
+D+WS G I+ ++ G PP F + A ++
Sbjct: 204 TQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMK 263
Query: 298 GKIDFERDPWPKVSKEAKELVKNMLDP----NPYNRLTLEEVLENPWIKN 343
G + E+ + + A L N+L+ + R+T E L +P+ ++
Sbjct: 264 GLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFES 313
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 143/347 (41%), Gaps = 86/347 (24%)
Query: 71 VSNPAEGNIL--------DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAK--EKLK 120
V + AEG+++ ++Y LG G FG QC + G KI K EK K
Sbjct: 15 VEDDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYK 74
Query: 121 TEIDIDDVRREVEIMRHL----PKHPNI-VTYKEAYEDKDAIYLVMELCEGGELFDRIVN 175
+ R E+ ++ + P + N+ V + ++ + + EL G FD + +
Sbjct: 75 -----EAARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELL-GLSTFDFLKD 128
Query: 176 KGH--YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGS-------------- 219
+ Y + + + VK H+N + H DLKPEN LF +
Sbjct: 129 NNYLPYPIHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDER 188
Query: 220 --ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVIIYIL 276
+++ ++ +DFG + F E IV + +Y APEV L + DVWS G II+
Sbjct: 189 SVKSTAVRVVDFGSATF--DHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEY 246
Query: 277 LCGVPPFWAETEEGIAHAII-----------------------RGKIDFERD-------- 305
G F +T + H + RG++D++ +
Sbjct: 247 YVGFTLF--QTHDNREHLAMMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVR 304
Query: 306 ----PWPK-VSKEAKE------LVKNMLDPNPYNRLTLEEVLENPWI 341
P + ++ EA+E L+++ML+ P RLTL E L++P+
Sbjct: 305 ENCKPLRRYLTSEAEEHHQLFDLIESMLEYEPAKRLTLGEALQHPFF 351
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 38/188 (20%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
+L+ + CH G+MHRD+KP N + E +L+ ID+GL+ F+ PG+++ V S Y+
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 191
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE--------------EGIAHA 294
PE+L ++Y +D+WS G + ++ PF+ + +G+
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVY 251
Query: 295 IIRGKIDFE-----------RDPWPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
+ + +I+ + R PW K VS EA + + +L + RLT E
Sbjct: 252 LNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALE 311
Query: 335 VLENPWIK 342
+ +P+ +
Sbjct: 312 AMTHPYFQ 319
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 138/353 (39%), Gaps = 98/353 (27%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
D Y +GRG +G + ++ + A KK+ + + ID + RE+ I+ L
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNR-MFEDLIDCKRILREITILNRLKS 86
Query: 141 HPNI----VTYKEAYEDKDAIYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGKTILRI 194
I + E D +Y+V+E+ + +LF + TE+ + +L
Sbjct: 87 DYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPI---FLTEQHVKTILYNLLLG 143
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS-------------------IFF 235
K HE+G++HRDLKP N L +++ +K DFGL+
Sbjct: 144 EKFIHESGIIHRDLKPANCLL---NQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENE 200
Query: 236 KPG-------EQFCEIVGSPYYMAPE--VLRRNYGPEIDVWSAGVIIYILL--------- 277
+PG +Q V + +Y APE +L+ NY ID+WS G I LL
Sbjct: 201 EPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINN 260
Query: 278 ----------------------------------------CGVPP---FWAETEEGIAHA 294
G PP T++ +
Sbjct: 261 PTNRFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKY 320
Query: 295 I----IRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
I R ID + + +SKE +L+++ML N R+T+++ L +P++K+
Sbjct: 321 IKLFPTRDGIDLSKK-YSSISKEGIDLLESMLRFNAQKRITIDKALSHPYLKD 372
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 120/290 (41%), Gaps = 56/290 (19%)
Query: 89 LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
+G G FG + G+TY K++ K E REV+ + L H NIV Y
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE-------REVKALAKLD-HVNIVHYN 70
Query: 149 EAYEDKD----------------AIYLVMELCEGGELFDRI-VNKGHYTERAAA-AVGKT 190
++ D +++ ME C+ G L I +G ++ A + +
Sbjct: 71 GCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQ 130
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
I + V H +++RDLKP N D Q+K DFGL K + G+ Y
Sbjct: 131 ITKGVDYIHSKKLINRDLKPSNIFLVD---TKQVKIGDFGLVTSLKNDGKRXRSKGTLRY 187
Query: 251 MAPE-VLRRNYGPEIDVWSAGVIIYILL--CGVP----PFWAETEEGIAHAIIRGKIDFE 303
M+PE + ++YG E+D+++ G+I+ LL C F+ + +GI I
Sbjct: 188 MSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIF------- 240
Query: 304 RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI------KNDNHA 347
K+ K L++ +L P +R E+L + KN+ H
Sbjct: 241 -------DKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKNERHT 283
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 133/330 (40%), Gaps = 71/330 (21%)
Query: 77 GNILD-KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIM 135
G++L +Y LG G FG +C + + G + KI K + + R E++++
Sbjct: 9 GDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVK---NVDRYCEAARSEIQVL 65
Query: 136 RHL-PKHPN----IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERA--AAAVG 188
HL PN V E +E I +V EL G +D I G R +
Sbjct: 66 EHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMA 124
Query: 189 KTILRIVKVCHENGVMHRDLKPENFLF--ADGSE--------------NSQLKAIDFGLS 232
I + V H N + H DLKPEN LF +D +E N +K +DFG +
Sbjct: 125 YQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA 184
Query: 233 IFFKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVIIYILLCGVPPF-WAETEEG 290
+ E +V +Y APEV L + DVWS G I+ G F +++E
Sbjct: 185 TY--DDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEH 242
Query: 291 IA-----------HAIIRGK----IDFERDPWPK-------VSKEAK------------- 315
+A H I + + +R W + VS+ K
Sbjct: 243 LAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEH 302
Query: 316 ----ELVKNMLDPNPYNRLTLEEVLENPWI 341
+L++ ML+ +P R+TL E L++P+
Sbjct: 303 ERLFDLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYA--CKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
T G+ +G G FG ++ G+ + K+ T + + EV ++R +H
Sbjct: 16 TVGQRIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRH 68
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCHE 200
NI+ + Y K + +V + CEG L+ + + + + + + + + H
Sbjct: 69 VNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 127
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF---FKPGEQFCEIVGSPYYMAPEVLR 257
++HRDLK N E+ +K DFGL+ + QF ++ GS +MAPEV+R
Sbjct: 128 KSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 184
Query: 258 RN----YGPEIDVWSAGVIIYILLCGVPPF 283
Y + DV++ G+++Y L+ G P+
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 96/203 (47%), Gaps = 15/203 (7%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
+L +Y K +G G GI ++ A KK+++ + + RE+ +M+
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMK- 78
Query: 138 LPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
+ H NI+ T +++ E+ +Y+VMEL + +++ ER + + + +
Sbjct: 79 VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQML 136
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
I K H G++HRDLKP N + ++ LK +DFGL+ V + YY
Sbjct: 137 CGI-KHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 252 APEV-LRRNYGPEIDVWSAGVII 273
APEV L Y +D+WS G I+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIM 215
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYA--CKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
T G+ +G G FG ++ G+ + K+ T + + EV ++R +H
Sbjct: 38 TVGQRIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRH 90
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCHE 200
NI+ + Y K + +V + CEG L+ + + + + + + + + H
Sbjct: 91 VNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 149
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF---FKPGEQFCEIVGSPYYMAPEVLR 257
++HRDLK N E+ +K DFGL+ + QF ++ GS +MAPEV+R
Sbjct: 150 KSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 206
Query: 258 RN----YGPEIDVWSAGVIIYILLCGVPPF 283
Y + DV++ G+++Y L+ G P+
Sbjct: 207 MQDKNPYSFQSDVYAFGIVLYELMTGQLPY 236
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYA--CKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
T G+ +G G FG ++ G+ + K+ T + + EV ++R +H
Sbjct: 39 TVGQRIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRH 91
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCHE 200
NI+ + Y K + +V + CEG L+ + + + + + + + + H
Sbjct: 92 VNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 150
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF---FKPGEQFCEIVGSPYYMAPEVLR 257
++HRDLK N E+ +K DFGL+ + QF ++ GS +MAPEV+R
Sbjct: 151 KSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 207
Query: 258 RN----YGPEIDVWSAGVIIYILLCGVPPF 283
Y + DV++ G+++Y L+ G P+
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYA--CKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
T G+ +G G FG ++ G+ + K+ T + + EV ++R +H
Sbjct: 13 TVGQRIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRH 65
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCHE 200
NI+ + Y K + +V + CEG L+ + + + + + + + + H
Sbjct: 66 VNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 124
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF---FKPGEQFCEIVGSPYYMAPEVLR 257
++HRDLK N E+ +K DFGL+ + QF ++ GS +MAPEV+R
Sbjct: 125 KSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 181
Query: 258 RN----YGPEIDVWSAGVIIYILLCGVPPF 283
Y + DV++ G+++Y L+ G P+
Sbjct: 182 MQDKNPYSFQSDVYAFGIVLYELMTGQLPY 211
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 96/203 (47%), Gaps = 15/203 (7%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
+L +Y K +G G GI ++ A KK+++ + + RE+ +M+
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKC 79
Query: 138 LPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
+ H NI+ T +++ E+ +Y+VMEL + +++ ER + + + +
Sbjct: 80 V-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQML 136
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
I K H G++HRDLKP N + ++ LK +DFGL+ V + YY
Sbjct: 137 CGI-KHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 252 APEV-LRRNYGPEIDVWSAGVII 273
APEV L Y +D+WS G I+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIM 215
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 55/75 (73%)
Query: 377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDG 436
+A+ L ++++ +K++F M+DTD +G +TF+ELKDGL +G ++ + ++K LM+AAD+D
Sbjct: 13 MAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDK 72
Query: 437 NGLLSCDEFVTMSVH 451
+G + EF+ +VH
Sbjct: 73 SGTIDYGEFIAATVH 87
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 120/262 (45%), Gaps = 26/262 (9%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
+++G GEFG +C + G YA K+ +K+ L +D + REV L +H ++V
Sbjct: 13 EKIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVR 71
Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL----RIVKVCHENG 202
Y A+ + D + + E C GG L D I A K +L R ++ H
Sbjct: 72 YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS 131
Query: 203 VMHRDLKPENFLFADGS-ENSQLKAID----FGLSIFFKPGE-QFCEIVGSPY------- 249
++H D+KP N + S N+ + D + FK G+ + SP
Sbjct: 132 LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSR 191
Query: 250 YMAPEVLRRNYG--PEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW 307
++A EVL+ NY P+ D+++ + + + G P ++ H I +G++ R P
Sbjct: 192 FLANEVLQENYTHLPKADIFALALTV-VXAAGAEPLPRNGDQW--HEIRQGRL--PRIP- 245
Query: 308 PKVSKEAKELVKNMLDPNPYNR 329
+S+E EL+K M+ P+P R
Sbjct: 246 QVLSQEFTELLKVMIHPDPERR 267
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 120/262 (45%), Gaps = 26/262 (9%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
+++G GEFG +C + G YA K+ +K+ L +D + REV L +H ++V
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVR 73
Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL----RIVKVCHENG 202
Y A+ + D + + E C GG L D I A K +L R ++ H
Sbjct: 74 YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS 133
Query: 203 VMHRDLKPENFLFADGS-ENSQLKAID----FGLSIFFKPGE-QFCEIVGSPY------- 249
++H D+KP N + S N+ + D + FK G+ + SP
Sbjct: 134 LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSR 193
Query: 250 YMAPEVLRRNYG--PEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW 307
++A EVL+ NY P+ D+++ + + + G P ++ H I +G++ R P
Sbjct: 194 FLANEVLQENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQW--HEIRQGRL--PRIP- 247
Query: 308 PKVSKEAKELVKNMLDPNPYNR 329
+S+E EL+K M+ P+P R
Sbjct: 248 QVLSQEFTELLKVMIHPDPERR 269
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYA--CKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
T G+ +G G FG ++ G+ + K+ T + + EV ++R +H
Sbjct: 16 TVGQRIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRH 68
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCHE 200
NI+ + Y K + +V + CEG L+ + + + + + + + + H
Sbjct: 69 VNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 127
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF---FKPGEQFCEIVGSPYYMAPEVLR 257
++HRDLK N E+ +K DFGL+ + QF ++ GS +MAPEV+R
Sbjct: 128 KSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 184
Query: 258 RN----YGPEIDVWSAGVIIYILLCGVPPF 283
Y + DV++ G+++Y L+ G P+
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 120/262 (45%), Gaps = 26/262 (9%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
+++G GEFG +C + G YA K+ +K+ L +D + REV L +H ++V
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVR 73
Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL----RIVKVCHENG 202
Y A+ + D + + E C GG L D I A K +L R ++ H
Sbjct: 74 YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS 133
Query: 203 VMHRDLKPENFLFADGS-ENSQLKAID----FGLSIFFKPGE-QFCEIVGSPY------- 249
++H D+KP N + S N+ + D + FK G+ + SP
Sbjct: 134 LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSR 193
Query: 250 YMAPEVLRRNYG--PEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW 307
++A EVL+ NY P+ D+++ + + + G P ++ H I +G++ R P
Sbjct: 194 FLANEVLQENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQW--HEIRQGRLP--RIP- 247
Query: 308 PKVSKEAKELVKNMLDPNPYNR 329
+S+E EL+K M+ P+P R
Sbjct: 248 QVLSQEFTELLKVMIHPDPERR 269
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYA--CKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
T G+ +G G FG ++ G+ + K+ T + + EV ++R +H
Sbjct: 11 TVGQRIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRH 63
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCHE 200
NI+ + Y K + +V + CEG L+ + + + + + + + + H
Sbjct: 64 VNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF---FKPGEQFCEIVGSPYYMAPEVLR 257
++HRDLK N E+ +K DFGL+ + QF ++ GS +MAPEV+R
Sbjct: 123 KSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 258 RN----YGPEIDVWSAGVIIYILLCGVPPF 283
Y + DV++ G+++Y L+ G P+
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 120/262 (45%), Gaps = 26/262 (9%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
+++G GEFG +C + G YA K+ +K+ L +D + REV L +H ++V
Sbjct: 17 EKIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVR 75
Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL----RIVKVCHENG 202
Y A+ + D + + E C GG L D I A K +L R ++ H
Sbjct: 76 YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS 135
Query: 203 VMHRDLKPENFLFADGS-ENSQLKAID----FGLSIFFKPGE-QFCEIVGSPY------- 249
++H D+KP N + S N+ + D + FK G+ + SP
Sbjct: 136 LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSR 195
Query: 250 YMAPEVLRRNYG--PEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW 307
++A EVL+ NY P+ D+++ + + + G P ++ H I +G++ R P
Sbjct: 196 FLANEVLQENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQW--HEIRQGRL--PRIP- 249
Query: 308 PKVSKEAKELVKNMLDPNPYNR 329
+S+E EL+K M+ P+P R
Sbjct: 250 QVLSQEFTELLKVMIHPDPERR 271
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 135/326 (41%), Gaps = 78/326 (23%)
Query: 86 GKELGRGEFGITHQCFEIETGET--YACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
G ++GRG +G ++ + + YA K+I + RE+ ++R L KHPN
Sbjct: 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMS-----ACREIALLREL-KHPN 79
Query: 144 IVTYKEAY--EDKDAIYLVMELCEGGELFDRIVNKGHYTERA-----------AAAVGKT 190
+++ ++ + ++L+ + E +L+ I K H +A ++
Sbjct: 80 VISLQKVFLSHADRKVWLLFDYAEH-DLWHII--KFHRASKANKKPVQLPRGMVKSLLYQ 136
Query: 191 ILRIVKVCHENGVMHRDLKPENFL-FADGSENSQLKAIDFGLSIFF----KPGEQFCEIV 245
IL + H N V+HRDLKP N L +G E ++K D G + F KP +V
Sbjct: 137 ILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVV 196
Query: 246 GSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPF-------------------- 283
+ +Y APE+L R+Y ID+W+ G I LL P F
Sbjct: 197 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDR 256
Query: 284 ------------WAETEEGIAHAIIRGKIDFERDPWPKVS-------------KEAKELV 318
W + ++ H+ + DF R+ + S +A L+
Sbjct: 257 IFNVMGFPADKDWEDIKKMPEHSTLMK--DFRRNTYTNCSLIKYMEKHKVKPDSKAFHLL 314
Query: 319 KNMLDPNPYNRLTLEEVLENPWIKND 344
+ +L +P R+T E+ +++P+ D
Sbjct: 315 QKLLTMDPIKRITSEQAMQDPYFLED 340
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 128/307 (41%), Gaps = 49/307 (15%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIA---KEKLKTEIDIDDVRREVEIMRHL 138
+Y E+G G +G ++ + +G A K + + I VR EV ++R L
Sbjct: 10 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVR-EVALLRRL 68
Query: 139 P--KHPNIVTYKE----AYEDKDA-IYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGK 189
+HPN+V + + D++ + LV E + D+ G E + +
Sbjct: 69 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE-TIKDLMR 127
Query: 190 TILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY 249
LR + H N ++HRDLKPEN L G +K DFGL+ + +V + +
Sbjct: 128 QFLRGLDFLHANCIVHRDLKPENILVTSG---GTVKLADFGLARIYSYQMALTPVVVTLW 184
Query: 250 YMAPEV-LRRNYGPEIDVWSAGVIIY------ILLC---------------GVPPFWAET 287
Y APEV L+ Y +D+WS G I L C G+PP E
Sbjct: 185 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP---ED 241
Query: 288 EEGIAHAIIRGKIDFERDP------WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
+ ++ RG R P P++ + +L+ ML NP+ R++ L++ ++
Sbjct: 242 DWPRDVSLPRGAFP-PRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 300
Query: 342 KNDNHAP 348
D P
Sbjct: 301 HKDEGNP 307
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 106/234 (45%), Gaps = 36/234 (15%)
Query: 65 FQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIA------KEK 118
++L++V +N E I G + G G FG+ ++ + T T A KK+A E+
Sbjct: 9 YELKNVTNNFDERPI---SVGGNKXGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEE 63
Query: 119 LKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI----- 173
LK + D +E+++ +H N+V D D + LV G L DR+
Sbjct: 64 LKQQFD-----QEIKVXAKC-QHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDG 117
Query: 174 VNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI 233
+ R A G + HEN +HRD+K N L E K DFGL+
Sbjct: 118 TPPLSWHXRCKIAQGAA--NGINFLHENHHIHRDIKSANILL---DEAFTAKISDFGLA- 171
Query: 234 FFKPGEQFCE------IVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVP 281
+ E+F + IVG+ Y APE LR P+ D++S GV++ ++ G+P
Sbjct: 172 --RASEKFAQXVXXSRIVGTTAYXAPEALRGEITPKSDIYSFGVVLLEIITGLP 223
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 86/187 (45%), Gaps = 38/187 (20%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
+L+ + CH G+MHRD+KP N + + +L+ ID+GL+ F+ P +++ V S Y+
Sbjct: 141 LLKALDYCHSKGIMHRDVKPHNVMI--DHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYF 198
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE--------------EGIAHA 294
PE+L + Y +D+WS G ++ ++ PF+ + E +
Sbjct: 199 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGY 258
Query: 295 IIRGKIDFE-----------RDPWPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
+ + ID + R W VS EA +L+ +L + RLT +E
Sbjct: 259 LKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKE 318
Query: 335 VLENPWI 341
+E+P+
Sbjct: 319 AMEHPYF 325
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYA--CKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
T G+ +G G FG ++ G+ + K+ T + + EV ++R +H
Sbjct: 39 TVGQRIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRH 91
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCHE 200
NI+ + Y K + +V + CEG L+ + + + + + + + + H
Sbjct: 92 VNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 150
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSI---FFKPGEQFCEIVGSPYYMAPEVLR 257
++HRDLK N E+ +K DFGL+ + QF ++ GS +MAPEV+R
Sbjct: 151 KSIIHRDLKSNNIFL---HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 207
Query: 258 RN----YGPEIDVWSAGVIIYILLCGVPPF 283
Y + DV++ G+++Y L+ G P+
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 15/203 (7%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
+L +Y K +G G GI ++ A KK+++ + + RE+ +M+
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKC 79
Query: 138 LPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
+ H NI+ T +++ E+ +Y+VMEL + +++ ER + + + +
Sbjct: 80 V-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQML 136
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
I K H G++HRDLKP N + + LK +DFGL+ V + YY
Sbjct: 137 CGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 252 APEV-LRRNYGPEIDVWSAGVII 273
APEV L Y +D+WS G I+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIM 215
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYA--CKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
T G+ +G G FG ++ G+ + K+ T + + EV ++R +H
Sbjct: 31 TVGQRIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRH 83
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCHE 200
NI+ + Y K + +V + CEG L+ + + + + + + + + H
Sbjct: 84 VNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 142
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSI---FFKPGEQFCEIVGSPYYMAPEVLR 257
++HRDLK N E+ +K DFGL+ + QF ++ GS +MAPEV+R
Sbjct: 143 KSIIHRDLKSNNIFL---HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 199
Query: 258 RN----YGPEIDVWSAGVIIYILLCGVPPF 283
Y + DV++ G+++Y L+ G P+
Sbjct: 200 MQDKNPYSFQSDVYAFGIVLYELMTGQLPY 229
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 108/226 (47%), Gaps = 18/226 (7%)
Query: 130 REVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAV 187
REV+++R +HPN++ Y +D+ Y+ +ELC L + + K H +
Sbjct: 66 REVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC-AATLQEYVEQKDFAHLGLEPITLL 124
Query: 188 GKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAI--DFGLSIFFKPGEQ-FCEI 244
+T + + H ++HRDLKP N L + + + ++KA+ DFGL G F
Sbjct: 125 QQTTSGLAHL-HSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRR 183
Query: 245 VGSP---YYMAPEVL----RRNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAII 296
G P ++APE+L + N +D++SAG + Y ++ G PF + I+
Sbjct: 184 SGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA--NIL 241
Query: 297 RGKIDFE-RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
G + P A+EL++ M+ +P R + + VL++P+
Sbjct: 242 LGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYA--CKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
T G+ +G G FG ++ G+ + K+ T + + EV ++R +H
Sbjct: 11 TVGQRIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRH 63
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCHE 200
NI+ + Y K + +V + CEG L+ + + + + + + + + H
Sbjct: 64 VNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSI---FFKPGEQFCEIVGSPYYMAPEVLR 257
++HRDLK N E+ +K DFGL+ + QF ++ GS +MAPEV+R
Sbjct: 123 KSIIHRDLKSNNIFL---HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 258 RN----YGPEIDVWSAGVIIYILLCGVPPF 283
Y + DV++ G+++Y L+ G P+
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 15/208 (7%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
+L +Y K +G G GI ++ A KK+++ + + RE+ +M+
Sbjct: 26 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKC 84
Query: 138 LPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
+ H NI+ T +++ E+ +Y+VMEL + +++ ER + + + +
Sbjct: 85 V-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQML 141
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
I K H G++HRDLKP N + + LK +DFGL+ V + YY
Sbjct: 142 CGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 197
Query: 252 APEV-LRRNYGPEIDVWSAGVIIYILLC 278
APEV L Y +D+WS G I+ ++C
Sbjct: 198 APEVILGMGYKENVDLWSVGCIMGEMVC 225
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 86/187 (45%), Gaps = 38/187 (20%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
+L+ + CH G+MHRD+KP N + + +L+ ID+GL+ F+ P +++ V S Y+
Sbjct: 146 LLKALDYCHSKGIMHRDVKPHNVMI--DHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYF 203
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE--------------EGIAHA 294
PE+L + Y +D+WS G ++ ++ PF+ + E +
Sbjct: 204 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGY 263
Query: 295 IIRGKIDFE-----------RDPWPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
+ + ID + R W VS EA +L+ +L + RLT +E
Sbjct: 264 LKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKE 323
Query: 335 VLENPWI 341
+E+P+
Sbjct: 324 AMEHPYF 330
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 15/203 (7%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
+L +Y K +G G GI ++ A KK+++ + + RE+ +M+
Sbjct: 23 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKC 81
Query: 138 LPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
+ H NI+ T +++ E+ +Y+VMEL + +++ ER + + + +
Sbjct: 82 V-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQML 138
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
I K H G++HRDLKP N + + LK +DFGL+ V + YY
Sbjct: 139 CGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMVPFVVTRYYR 194
Query: 252 APEV-LRRNYGPEIDVWSAGVII 273
APEV L Y +D+WS G I+
Sbjct: 195 APEVILGMGYKENVDIWSVGCIM 217
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 102/229 (44%), Gaps = 29/229 (12%)
Query: 81 DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
DK T GK LG G FG + + I+ + +A + LK TE D+ D+ E+E+M
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI----------------VNKGHY 179
+ + KH NI+T A +Y+++E G L + + V +
Sbjct: 95 KMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
T + + + R ++ +HRDL N L +EN+ +K DFGL+ +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNID 211
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
+ + +MAPE L R Y + DVWS GV+++ I G P+
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 15/208 (7%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
+L +Y K +G G GI ++ A KK+++ + + RE+ +M+
Sbjct: 15 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKC 73
Query: 138 LPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
+ H NI+ T +++ E+ +Y+VMEL + +++ ER + + + +
Sbjct: 74 V-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQML 130
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
I K H G++HRDLKP N + + LK +DFGL+ V + YY
Sbjct: 131 CGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 186
Query: 252 APEV-LRRNYGPEIDVWSAGVIIYILLC 278
APEV L Y +D+WS G I+ ++C
Sbjct: 187 APEVILGMGYKENVDLWSVGCIMGEMVC 214
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 113/262 (43%), Gaps = 50/262 (19%)
Query: 75 AEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEI 134
++ I D+Y +G G +G + ++ A KKI + + ID + RE+ I
Sbjct: 47 SDWQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILR-VFEDLIDCKRILREIAI 105
Query: 135 MR-----HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHY-TERAAAAVG 188
+ H+ K +IV K+ E D +Y+V+E+ + F ++ Y TE +
Sbjct: 106 LNRLNHDHVVKVLDIVIPKDV-EKFDELYVVLEIADSD--FKKLFRTPVYLTELHIKTLL 162
Query: 189 KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS------------IFFK 236
+L VK H G++HRDLKP N L +++ +K DFGL+ +
Sbjct: 163 YNLLVGVKYVHSAGILHRDLKPANCLV---NQDCSVKVCDFGLARTVDYPENGNSQLPIS 219
Query: 237 PGEQFCEIVGSP----------------YYMAPE--VLRRNYGPEIDVWSAGVIIYILLC 278
P E +V P +Y APE +L+ NY IDVWS G I LL
Sbjct: 220 PREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
Query: 279 GVPPFWAETEEGIAHAIIRGKI 300
+ +E +A+ RG +
Sbjct: 280 MI-------KENVAYHADRGPL 294
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
+P S +A L+K ML NP R+T+ E L +P+ K
Sbjct: 366 FPASSADAIHLLKRMLVFNPNKRITINECLAHPFFK 401
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 120/303 (39%), Gaps = 69/303 (22%)
Query: 89 LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
+G G FG + G+TY +++ K E REV+ + L H NIV Y
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAE-------REVKALAKLD-HVNIVHYN 71
Query: 149 EAYEDKD-----------------------------AIYLVMELCEGGELFDRI-VNKGH 178
++ D +++ ME C+ G L I +G
Sbjct: 72 GCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE 131
Query: 179 YTERAAA-AVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP 237
++ A + + I + V H ++HRDLKP N D Q+K DFGL K
Sbjct: 132 KLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVD---TKQVKIGDFGLVTSLKN 188
Query: 238 GEQFCEIVGSPYYMAPE-VLRRNYGPEIDVWSAGVIIYILL--CGVP----PFWAETEEG 290
+ G+ YM+PE + ++YG E+D+++ G+I+ LL C F+ + +G
Sbjct: 189 DGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDG 248
Query: 291 IAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI------KND 344
I I K+ K L++ +L P +R E+L + KN+
Sbjct: 249 IISDIF--------------DKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKNE 294
Query: 345 NHA 347
H
Sbjct: 295 RHT 297
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 15/203 (7%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
+L +Y K +G G GI ++ A KK+++ + + RE+ +M+
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKC 79
Query: 138 LPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
+ H NI+ T +++ E+ +Y+VMEL + +++ ER + + + +
Sbjct: 80 V-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQML 136
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
I K H G++HRDLKP N + + LK +DFGL+ V + YY
Sbjct: 137 CGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 252 APEV-LRRNYGPEIDVWSAGVII 273
APEV L Y +D+WS G I+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIM 215
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 15/203 (7%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
+L +Y K +G G GI ++ A KK+++ + + RE+ +M+
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKC 79
Query: 138 LPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
+ H NI+ T +++ E+ +Y+VMEL + +++ ER + + + +
Sbjct: 80 V-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQML 136
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
I K H G++HRDLKP N + + LK +DFGL+ V + YY
Sbjct: 137 CGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 252 APEV-LRRNYGPEIDVWSAGVII 273
APEV L Y +D+WS G I+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIM 215
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 77 GNILD--KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEI 134
G+++D + TF +E+G G+FG+ H + + + A K I + + E D E E+
Sbjct: 1 GSVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKV-AIKTIREGAMSEE----DFIEEAEV 55
Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILR 193
M L HP +V ++ I LV E E G L D + +G + + +
Sbjct: 56 MMKL-SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 114
Query: 194 IVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---Y 250
+ E V+HRDL N L EN +K DFG++ F +Q+ G+ + +
Sbjct: 115 GMAYLEEASVIHRDLAARNCLVG---ENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKW 170
Query: 251 MAPEVLR-RNYGPEIDVWSAGVIIY 274
+PEV Y + DVWS GV+++
Sbjct: 171 ASPEVFSFSRYSSKSDVWSFGVLMW 195
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 15/203 (7%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
+L +Y K +G G GI ++ A KK+++ + + RE+ +M+
Sbjct: 22 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKC 80
Query: 138 LPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
+ H NI+ T +++ E+ +Y+VMEL + +++ ER + + + +
Sbjct: 81 V-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQML 137
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
I K H G++HRDLKP N + + LK +DFGL+ V + YY
Sbjct: 138 CGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 193
Query: 252 APEV-LRRNYGPEIDVWSAGVII 273
APEV L Y +D+WS G I+
Sbjct: 194 APEVILGMGYKENVDIWSVGCIM 216
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 21/210 (10%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYA--CKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
T G+ +G G FG ++ G+ + K+ T + + EV ++R +H
Sbjct: 11 TVGQRIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRH 63
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCHE 200
NI+ + Y + +V + CEG L+ + + + + + + + + H
Sbjct: 64 VNILLFM-GYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF---FKPGEQFCEIVGSPYYMAPEVLR 257
++HRDLK N E+ +K DFGL+ + QF ++ GS +MAPEV+R
Sbjct: 123 KSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 258 RN----YGPEIDVWSAGVIIYILLCGVPPF 283
Y + DV++ G+++Y L+ G P+
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 124/280 (44%), Gaps = 30/280 (10%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
+++G G FG H+ G A K + ++ E +++ REV IM+ L +HPNIV
Sbjct: 43 EKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAE-RVNEFLREVAIMKRL-RHPNIVL 98
Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKG----HYTERAAAAVGKTILRIVKVCHENG 202
+ A + +V E G L+ R+++K ER ++ + + + H
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLY-RLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 203 --VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC---EIVGSPYYMAPEVLR 257
++HRDLK N L + +K DFGLS F G+P +MAPEVLR
Sbjct: 158 PPIVHRDLKSPNLLV---DKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLR 212
Query: 258 RNYGPE-IDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGK---IDFERDPWPKVSKE 313
E DV+S GVI++ L P W A + K ++ R+ P+V+
Sbjct: 213 DEPSNEKSDVYSFGVILWELATLQQP-WGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAA- 270
Query: 314 AKELVKNMLDPNPYNRLTLEEVLE--NPWIKNDNHAPNVS 351
+++ P+ R + +++ P IK+ PN S
Sbjct: 271 ---IIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPPNRS 307
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 123/287 (42%), Gaps = 47/287 (16%)
Query: 89 LGRGEFGITHQCFEIETGETYACKKI--AKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
LG+G FG + YA KKI +EKL T + EV ++ L H +V
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLST------ILSEVXLLASL-NHQYVVR 66
Query: 147 YKEAY-------------EDKDAIYLVMELCEGGELFDRIVNKGHYTER-AAAAVGKTIL 192
Y A+ + K +++ E CE L+D I ++ +R + + IL
Sbjct: 67 YYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL 126
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-------------PG- 238
+ H G++HR+LKP N +F D S N +K DFGL+ PG
Sbjct: 127 EALSYIHSQGIIHRNLKPXN-IFIDESRN--VKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 239 -EQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEE-GIAHA 294
+ +G+ Y+A EVL +Y +ID +S G+I + + PF E I
Sbjct: 184 SDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFF---EXIYPFSTGXERVNILKK 240
Query: 295 IIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
+ I+F D K K++++ ++D +P R +L + W+
Sbjct: 241 LRSVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 89 LGRGEFGITHQCFEIETGETYA--CKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
+G G FG ++ G+ + KI K T R EV ++R +H NI+
Sbjct: 44 IGSGSFGTVYK------GKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRK-TRHVNILL 96
Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCHENGVMH 205
+ Y KD + +V + CEG L+ + V + + + + + + H ++H
Sbjct: 97 FM-GYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIH 155
Query: 206 RDLKPENFLFADGSENSQLKAIDFGLSIF---FKPGEQFCEIVGSPYYMAPEVLRRN--- 259
RD+K N +G +K DFGL+ + +Q + GS +MAPEV+R
Sbjct: 156 RDMKSNNIFLHEGLT---VKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNN 212
Query: 260 -YGPEIDVWSAGVIIYILLCGVPPF 283
+ + DV+S G+++Y L+ G P+
Sbjct: 213 PFSFQSDVYSYGIVLYELMTGELPY 237
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 119/269 (44%), Gaps = 29/269 (10%)
Query: 88 ELGRGEFGITHQCFEIETGETYACKKI-----AKEKLKTEIDIDDVRREVEIMRHLPKHP 142
ELGRG +G+ + + +G+ A K+I ++E+ + D+D R V+ P
Sbjct: 41 ELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDC-------P 93
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGG--ELFDRIVNKGH-YTERAAAAVGKTILRIVKVCH 199
VT+ A + +++ EL + + + ++++KG E + +I++ ++ H
Sbjct: 94 FTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH 153
Query: 200 EN-GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF-----KPGEQFCEIVGSPYYMAP 253
V+HRD+KP N L + Q+K DFG+S + K + C+ +P + P
Sbjct: 154 SKLSVIHRDVKPSNVLI---NALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINP 210
Query: 254 EVLRRNYGPEIDVWSAGVIIYILLCGVPPF--WAETEEGIAHAIIRGKIDFERDPWPKVS 311
E+ ++ Y + D+WS G+ L P+ W + + + D K S
Sbjct: 211 ELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPAD---KFS 267
Query: 312 KEAKELVKNMLDPNPYNRLTLEEVLENPW 340
E + L N R T E+ ++P+
Sbjct: 268 AEFVDFTSQCLKKNSKERPTYPELXQHPF 296
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
+L +Y K +G G GI ++ A KK+++ + + RE+ +M+
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKC 79
Query: 138 LPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
+ H NI+ T +++ E+ +Y+VMEL + +++ ER + + + +
Sbjct: 80 V-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQML 136
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC---EIVGSP 248
I K H G++HRDLKP N + + LK +DFGL+ G F E+V +
Sbjct: 137 CGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA--RTAGTSFMMEPEVV-TR 189
Query: 249 YYMAPEV-LRRNYGPEIDVWSAGVIIYILLC 278
YY APEV L Y +D+WS G I+ ++C
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMVC 220
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 15/203 (7%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
+L +Y K +G G GI ++ A KK+++ + + RE+ +M+
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKC 79
Query: 138 LPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
+ H NI+ T +++ E+ +Y+VMEL + +++ ER + + + +
Sbjct: 80 V-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQML 136
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
I K H G++HRDLKP N + + LK +DFGL+ V + YY
Sbjct: 137 CGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPEVVTRYYR 192
Query: 252 APEV-LRRNYGPEIDVWSAGVII 273
APEV L Y +D+WS G I+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIM 215
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 35/188 (18%)
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
N++ K + D + + M E D I+N + E + + + +K H+ G
Sbjct: 81 NVMGVKYCFRKNDHVVIAMPYLEHESFLD-ILNSLSFQEVREYMLN--LFKALKRIHQFG 137
Query: 203 VMHRDLKPENFLF--------------ADGSENSQLKAIDF-------------GLSIFF 235
++HRD+KP NFL+ A G+ +++++ + F SI
Sbjct: 138 IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICL 197
Query: 236 KPGEQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAH 293
+Q G+P + APEVL + N ID+WSAGVI LL G PF+ +++ A
Sbjct: 198 SRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTAL 257
Query: 294 A---IIRG 298
A IRG
Sbjct: 258 AQIMTIRG 265
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 77 GNILD--KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEI 134
G+++D + TF +E+G G+FG+ H + + + A K I + + E D E E+
Sbjct: 1 GSVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKV-AIKTIREGAMSEE----DFIEEAEV 55
Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILR 193
M L HP +V ++ I LV E E G L D + +G + + +
Sbjct: 56 MMKL-SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 114
Query: 194 IVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---Y 250
+ E V+HRDL N L EN +K DFG++ F +Q+ G+ + +
Sbjct: 115 GMAYLEEACVIHRDLAARNCLVG---ENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKW 170
Query: 251 MAPEVLR-RNYGPEIDVWSAGVIIY 274
+PEV Y + DVWS GV+++
Sbjct: 171 ASPEVFSFSRYSSKSDVWSFGVLMW 195
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 115/259 (44%), Gaps = 28/259 (10%)
Query: 89 LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK--HPNIVT 146
+GRG FG+ C + A K+I E + ++ +R L + HPNIV
Sbjct: 16 VGRGAFGVV--CKAKWRAKDVAIKQIESESERKAFIVE--------LRQLSRVNHPNIVK 65
Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNK---GHYTERAAAAVGKTILRIVKVCHE--- 200
A + + LVME EGG L++ + +YT A + + V H
Sbjct: 66 LYGAC--LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 123
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-RN 259
++HRDLKP N L G + LK DFG + + GS +MAPEV N
Sbjct: 124 KALIHRDLKPPNLLLVAG--GTVLKICDFGTACDIQ--THMTNNKGSAAWMAPEVFEGSN 179
Query: 260 YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKELV 318
Y + DV+S G+I++ ++ PF + G A I+ + R P K + K + L+
Sbjct: 180 YSEKCDVFSWGIILWEVITRRKPF--DEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLM 237
Query: 319 KNMLDPNPYNRLTLEEVLE 337
+P R ++EE+++
Sbjct: 238 TRCWSKDPSQRPSMEEIVK 256
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 91/196 (46%), Gaps = 15/196 (7%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
TF +E+G G+FG+ H + + + A K I KE +E DD E E+M L HP
Sbjct: 30 TFVQEIGSGQFGLVHLGYWLNKDKV-AIKTI-KEGSMSE---DDFIEEAEVMMKL-SHPK 83
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCHENG 202
+V ++ I LV E E G L D + +G + + + + E
Sbjct: 84 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 143
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLR-R 258
V+HRDL N L EN +K DFG++ F +Q+ G+ + + +PEV
Sbjct: 144 VIHRDLAARNCLVG---ENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFS 199
Query: 259 NYGPEIDVWSAGVIIY 274
Y + DVWS GV+++
Sbjct: 200 RYSSKSDVWSFGVLMW 215
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 115/259 (44%), Gaps = 28/259 (10%)
Query: 89 LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK--HPNIVT 146
+GRG FG+ C + A K+I E + ++ +R L + HPNIV
Sbjct: 17 VGRGAFGVV--CKAKWRAKDVAIKQIESESERKAFIVE--------LRQLSRVNHPNIVK 66
Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNK---GHYTERAAAAVGKTILRIVKVCHE--- 200
A + + LVME EGG L++ + +YT A + + V H
Sbjct: 67 LYGAC--LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 124
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-RN 259
++HRDLKP N L G + LK DFG + + GS +MAPEV N
Sbjct: 125 KALIHRDLKPPNLLLVAG--GTVLKICDFGTACDIQ--THMTNNKGSAAWMAPEVFEGSN 180
Query: 260 YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKELV 318
Y + DV+S G+I++ ++ PF + G A I+ + R P K + K + L+
Sbjct: 181 YSEKCDVFSWGIILWEVITRRKPF--DEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLM 238
Query: 319 KNMLDPNPYNRLTLEEVLE 337
+P R ++EE+++
Sbjct: 239 TRCWSKDPSQRPSMEEIVK 257
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
+L +Y K +G G GI ++ A KK+++ + + RE+ +M+
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKC 79
Query: 138 LPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
+ H NI+ T +++ E+ +Y+VMEL + +++ ER + + + +
Sbjct: 80 V-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQML 136
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC---EIVGSP 248
I K H G++HRDLKP N + + LK +DFGL+ G F E+V +
Sbjct: 137 CGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA--RTAGTSFMMEPEVV-TR 189
Query: 249 YYMAPEV-LRRNYGPEIDVWSAGVIIYILLC 278
YY APEV L Y +D+WS G I+ ++C
Sbjct: 190 YYRAPEVILGMGYKENVDLWSVGCIMGEMVC 220
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 124/280 (44%), Gaps = 30/280 (10%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
+++G G FG H+ G A K + ++ E +++ REV IM+ L +HPNIV
Sbjct: 43 EKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAE-RVNEFLREVAIMKRL-RHPNIVL 98
Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKG----HYTERAAAAVGKTILRIVKVCHENG 202
+ A + +V E G L+ R+++K ER ++ + + + H
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLY-RLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 203 --VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC---EIVGSPYYMAPEVLR 257
++HR+LK N L + +K DFGLS F G+P +MAPEVLR
Sbjct: 158 PPIVHRNLKSPNLLV---DKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLR 212
Query: 258 RNYGPE-IDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGK---IDFERDPWPKVSKE 313
E DV+S GVI++ L P W A + K ++ R+ P+V+
Sbjct: 213 DEPSNEKSDVYSFGVILWELATLQQP-WGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAA- 270
Query: 314 AKELVKNMLDPNPYNRLTLEEVLE--NPWIKNDNHAPNVS 351
+++ P+ R + +++ P IK+ PN S
Sbjct: 271 ---IIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPPNRS 307
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 86 GKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIV 145
G+ LG+G FG + ETGE K++ + +T+ +EV++MR L +HPN++
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQ---RTFLKEVKVMRCL-EHPNVL 70
Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVM 204
+ + + E +GG L I + Y + K I + H ++
Sbjct: 71 KFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNII 130
Query: 205 HRDLKPENFLFADGSENSQLKAIDFGLSIFF--------------KPG-EQFCEIVGSPY 249
HRDL N L EN + DFGL+ KP ++ +VG+PY
Sbjct: 131 HRDLNSHNCLV---RENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPY 187
Query: 250 YMAPEVLR-RNYGPEIDVWSAGVII 273
+MAPE++ R+Y ++DV+S G+++
Sbjct: 188 WMAPEMINGRSYDEKVDVFSFGIVL 212
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 100/229 (43%), Gaps = 29/229 (12%)
Query: 81 DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
DK T GK LG G FG + + I+ + +A + LK TE D+ D+ E+E+M
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI----------------VNKGHY 179
+ + KH NI+ A +Y+++E G L + + V +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
T + + + R ++ +HRDL N L +EN+ +K DFGL+ +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNID 211
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
+ +MAPE L R Y + DVWS GV+++ I G P+
Sbjct: 212 YYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 101/229 (44%), Gaps = 29/229 (12%)
Query: 81 DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
DK T GK LG G FG + + I+ + +A + LK TE D+ D+ E+E+M
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMM 94
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI----------------VNKGHY 179
+ + KH NI+ A +Y+++E G L + + V +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
T + + + R ++ +HRDL N L +EN+ +K DFGL+ +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNID 211
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
+ + +MAPE L R Y + DVWS GV+++ I G P+
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Query: 377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDG 436
+AD L +DQ+++ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DG
Sbjct: 1 MADQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 437 NGLLSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
NG + EF+ M+ +K +++ L +AFR FDK+Q+GFI
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFI 101
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 42/63 (66%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
D ++K+ F + D D+NG ++ EL+ + +G+K++D +V ++ ADVDG+G ++ D
Sbjct: 81 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYD 140
Query: 444 EFV 446
EFV
Sbjct: 141 EFV 143
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 133/308 (43%), Gaps = 49/308 (15%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-------------- 125
++ Y + L +G+F C + + YA KK K L+ + D
Sbjct: 30 INDYRIIRTLNQGKFNKIILC--EKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKY 87
Query: 126 DDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGEL--FDR--IVNKGHYTE 181
DD + E++I+ + K+ +T + + D +Y++ E E + FD V +YT
Sbjct: 88 DDFKNELQIITDI-KNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTC 146
Query: 182 RAAAAVGKTILRIV-----KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK 236
V K I++ V + +E + HRD+KP N L +N ++K DFG S +
Sbjct: 147 FIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILM---DKNGRVKLSDFGESEYM- 202
Query: 237 PGEQFCEIVGSPYYMAPEVL--RRNY-GPEIDVWSAGVIIYILLCGVPPF-----WAETE 288
++ G+ +M PE +Y G ++D+WS G+ +Y++ V PF E
Sbjct: 203 VDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELF 262
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAK-----------ELVKNMLDPNPYNRLTLEEVLE 337
I I +D +P +K++ + +K L NP R+T E+ L+
Sbjct: 263 NNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322
Query: 338 NPWIKNDN 345
+ W+ + N
Sbjct: 323 HEWLADTN 330
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 17/211 (8%)
Query: 85 FGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI----DDVRREVEIMRHLPK 140
+ K++G+G FG+ H+ ++ A K + + E ++ + +REV IM +L
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-N 81
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA--VGKTILRIVKVC 198
HPNIV + +VME G+L+ R+++K H + + + L I +
Sbjct: 82 HPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 199 HENG-VMHRDLKPENFLFADGSENSQL--KAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV 255
++N ++HRDL+ N EN+ + K DFGLS + ++G+ +MAPE
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ--QSVHSVSGLLGNFQWMAPET 197
Query: 256 L---RRNYGPEIDVWSAGVIIYILLCGVPPF 283
+ +Y + D +S +I+Y +L G PF
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
T LGRG FG H+ + +TG A KK+ E + E E+ L P
Sbjct: 75 THQPRLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE--------ELVACAGL-SSPR 125
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTE-RAAAAVGKTILRIVKVCHENG 202
IV A + + + MEL EGG L I G E RA +G+ L ++ H
Sbjct: 126 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQA-LEGLEYLHTRR 184
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP---GEQFCE---IVGSPYYMAPE-V 255
++H D+K +N L + S+ S+ DFG ++ +P G+ I G+ +MAPE V
Sbjct: 185 ILHGDVKADNVLLS--SDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVV 242
Query: 256 LRRNYGPEIDVWSAGVIIYILLCGVPPF 283
+ + ++D+WS+ ++ +L G P+
Sbjct: 243 MGKPCDAKVDIWSSCCMMLHMLNGCHPW 270
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 101/229 (44%), Gaps = 29/229 (12%)
Query: 81 DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
DK T GK LG G FG + + I+ + +A + LK TE D+ D+ E+E+M
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI----------------VNKGHY 179
+ + KH NI+ A +Y+++E G L + + V +
Sbjct: 95 KMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
T + + + R ++ +HRDL N L +EN+ +K DFGL+ +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNID 211
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
+ + +MAPE L R Y + DVWS GV+++ I G P+
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 101/229 (44%), Gaps = 29/229 (12%)
Query: 81 DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
DK T GK LG G FG + + I+ + +A + LK TE D+ D+ E+E+M
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI----------------VNKGHY 179
+ + KH NI+ A +Y+++E G L + + V +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
T + + + R ++ +HRDL N L +EN+ ++ DFGL+ +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMRIADFGLARDINNID 211
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
+ + +MAPE L R Y + DVWS GV+++ I G P+
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDG 436
+AD L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 437 NGLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
NG + EF+TM +K +++ + +AFR FDK+ +GFI
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFI 101
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDG 436
+AD L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 437 NGLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
NG + EF+TM +K +++ + +AFR FDK+ +GFI
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFI 101
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDG 436
+AD L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 437 NGLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
NG + EF+TM +K +++ + +AFR FDK+ +GFI
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFI 101
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 350 VSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEEL 409
V GN T +F M K K D +I++ F + D D NG ++ EL
Sbjct: 56 VDADGNGTIDFPEFLTMMARKMK---------DTDSEEEIREAFRVFDKDGNGFISAAEL 106
Query: 410 KDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTM 448
+ + +G+K++D +V ++ AD+DG+G ++ +EFVTM
Sbjct: 107 RHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTM 145
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
AD L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 438 GLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
G + EF+TM +K +++ + +AFR FDK+ +GFI
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFI 100
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 350 VSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEEL 409
V GN T +F M K K D +I++ F + D D NG ++ EL
Sbjct: 55 VDADGNGTIDFPEFLTMMARKMK---------DTDSEEEIREAFRVFDKDGNGFISAAEL 105
Query: 410 KDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTM 448
+ + +G+K++D +V ++ AD+DG+G ++ +EFVTM
Sbjct: 106 RHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTM 144
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
AD L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 438 GLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
G + EF+TM +K +++ + +AFR FDK+ +GFI
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFI 100
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 101/229 (44%), Gaps = 29/229 (12%)
Query: 81 DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
DK T GK LG G FG + + I+ + +A + LK TE D+ D+ E+E+M
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 86
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI----------------VNKGHY 179
+ + KH NI+ A +Y+++E G L + + V +
Sbjct: 87 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 146
Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
T + + + R ++ +HRDL N L +EN+ +K DFGL+ +
Sbjct: 147 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNID 203
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
+ + +MAPE L R Y + DVWS GV+++ I G P+
Sbjct: 204 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 252
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 100/229 (43%), Gaps = 29/229 (12%)
Query: 81 DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
DK T GK LG G FG + + I+ + +A + LK TE D+ D+ E+E+M
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI----------------VNKGHY 179
+ + KH NI+ A +Y+++E G L + + V +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQM 154
Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
T + + + R ++ +HRDL N L +EN+ +K DFGL+ +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNID 211
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
+ +MAPE L R Y + DVWS GV+++ I G P+
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 101/229 (44%), Gaps = 29/229 (12%)
Query: 81 DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
DK T GK LG G FG + + I+ + +A + LK TE D+ D+ E+E+M
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI----------------VNKGHY 179
+ + KH NI+ A +Y+++E G L + + V +
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 200
Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
T + + + R ++ +HRDL N L +EN+ +K DFGL+ +
Sbjct: 201 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNID 257
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
+ + +MAPE L R Y + DVWS GV+++ I G P+
Sbjct: 258 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 306
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDG 436
+AD L DQ+++ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DG
Sbjct: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 437 NGLLSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
NG + EF+ M+ +K +++ L +AFR FDK+Q+GFI
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFI 101
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 42/63 (66%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
D ++K+ F + D D+NG ++ EL+ + +G+K++D +V ++ ADVDG+G ++ +
Sbjct: 81 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 140
Query: 444 EFV 446
EFV
Sbjct: 141 EFV 143
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 89/196 (45%), Gaps = 15/196 (7%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
TF +E+G G+FG+ H + + + A K I + + E D E E+M L HP
Sbjct: 13 TFVQEIGSGQFGLVHLGYWLNKDKV-AIKTIREGAMSEE----DFIEEAEVMMKL-SHPK 66
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCHENG 202
+V ++ I LV E E G L D + +G + + + + E
Sbjct: 67 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 126
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLR-R 258
V+HRDL N L EN +K DFG++ F +Q+ G+ + + +PEV
Sbjct: 127 VIHRDLAARNCLVG---ENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFS 182
Query: 259 NYGPEIDVWSAGVIIY 274
Y + DVWS GV+++
Sbjct: 183 RYSSKSDVWSFGVLMW 198
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 101/229 (44%), Gaps = 29/229 (12%)
Query: 81 DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
DK T GK LG G FG + + I+ + +A + LK TE D+ D+ E+E+M
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 81
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI----------------VNKGHY 179
+ + KH NI+ A +Y+++E G L + + V +
Sbjct: 82 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 141
Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
T + + + R ++ +HRDL N L +EN+ +K DFGL+ +
Sbjct: 142 TFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLV---TENNVMKIADFGLARDINNID 198
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
+ + +MAPE L R Y + DVWS GV+++ I G P+
Sbjct: 199 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 247
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 100/229 (43%), Gaps = 29/229 (12%)
Query: 81 DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
DK T GK LG G FG + + I+ + +A + LK TE D+ D+ E+E+M
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI----------------VNKGHY 179
+ + KH NI+ A +Y+++E G L + + V +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
T + + + R ++ +HRDL N L +EN+ +K DFGL+ +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNID 211
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
+ +MAPE L R Y + DVWS GV+++ I G P+
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 101/229 (44%), Gaps = 29/229 (12%)
Query: 81 DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
DK T GK LG G FG + + I+ + +A + LK TE D+ D+ E+E+M
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 83
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI----------------VNKGHY 179
+ + KH NI+ A +Y+++E G L + + V +
Sbjct: 84 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 143
Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
T + + + R ++ +HRDL N L +EN+ +K DFGL+ +
Sbjct: 144 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNID 200
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
+ + +MAPE L R Y + DVWS GV+++ I G P+
Sbjct: 201 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 249
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 89/196 (45%), Gaps = 15/196 (7%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
TF +E+G G+FG+ H + + + A K I + + E D E E+M L HP
Sbjct: 8 TFVQEIGSGQFGLVHLGYWLNKDKV-AIKTIREGAMSEE----DFIEEAEVMMKL-SHPK 61
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCHENG 202
+V ++ I LV E E G L D + +G + + + + E
Sbjct: 62 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 121
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLR-R 258
V+HRDL N L EN +K DFG++ F +Q+ G+ + + +PEV
Sbjct: 122 VIHRDLAARNCLVG---ENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFS 177
Query: 259 NYGPEIDVWSAGVIIY 274
Y + DVWS GV+++
Sbjct: 178 RYSSKSDVWSFGVLMW 193
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDG 436
+AD L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 437 NGLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
NG + EF+TM +K +++ + +AFR FDK+ +G+I
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 101
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
D +I++ F + D D NG ++ EL+ + +G+K++D +V ++ AD+DG+G ++ +
Sbjct: 81 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 444 EFVTM 448
EFV M
Sbjct: 141 EFVQM 145
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 29/229 (12%)
Query: 81 DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
D+ GK LG G FG + + ++ + K+A + LK TE D+ D+ E+E+M
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGEL-----------FDRIVNKGHYTE--- 181
+ + KH NI+ A +Y+++E G L + N H E
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 147
Query: 182 --RAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
+ + + R ++ +HRDL N L +E++ +K DFGL+ +
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHID 204
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
+ + +MAPE L R Y + DVWS GV+++ I G P+
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 89/196 (45%), Gaps = 15/196 (7%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
TF +E+G G+FG+ H + + + A K I + + E D E E+M L HP
Sbjct: 11 TFVQEIGSGQFGLVHLGYWLNKDKV-AIKTIREGAMSEE----DFIEEAEVMMKL-SHPK 64
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCHENG 202
+V ++ I LV E E G L D + +G + + + + E
Sbjct: 65 LVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 124
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLR-R 258
V+HRDL N L EN +K DFG++ F +Q+ G+ + + +PEV
Sbjct: 125 VIHRDLAARNCLVG---ENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFS 180
Query: 259 NYGPEIDVWSAGVIIY 274
Y + DVWS GV+++
Sbjct: 181 RYSSKSDVWSFGVLMW 196
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 29/229 (12%)
Query: 81 DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
D+ GK LG G FG + + ++ + K+A + LK TE D+ D+ E+E+M
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-----------VNKGHYTE--- 181
+ + KH NI+ A +Y+++E G L + + N H E
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 147
Query: 182 --RAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
+ + + R ++ +HRDL N L +E++ +K DFGL+ +
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHID 204
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
+ + +MAPE L R Y + DVWS GV+++ I G P+
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
T +GRG FG H+ + +TG A KK+ E + E E+ L P
Sbjct: 61 THQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE--------ELVACAGL-SSPR 111
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTE-RAAAAVGKTILRIVKVCHENG 202
IV A + + + MEL EGG L I G E RA +G+ L ++ H
Sbjct: 112 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQA-LEGLEYLHTRR 170
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP---GEQFCE---IVGSPYYMAPE-V 255
++H D+K +N L + S+ S+ DFG ++ +P G+ I G+ +MAPE V
Sbjct: 171 ILHGDVKADNVLLS--SDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVV 228
Query: 256 LRRNYGPEIDVWSAGVIIYILLCGVPPF 283
+ + ++D+WS+ ++ +L G P+
Sbjct: 229 MGKPCDAKVDIWSSCCMMLHMLNGCHPW 256
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 29/229 (12%)
Query: 81 DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
D+ GK LG G FG + + ++ + K+A + LK TE D+ D+ E+E+M
Sbjct: 17 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 76
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-----------VNKGHYTE--- 181
+ + KH NI+ A +Y+++E G L + + N H E
Sbjct: 77 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 136
Query: 182 --RAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
+ + + R ++ +HRDL N L +E++ +K DFGL+ +
Sbjct: 137 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHID 193
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
+ + +MAPE L R Y + DVWS GV+++ I G P+
Sbjct: 194 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 242
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 29/229 (12%)
Query: 81 DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
D+ GK LG G FG + + ++ + K+A + LK TE D+ D+ E+E+M
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGEL-----------FDRIVNKGHYTE--- 181
+ + KH NI+ A +Y+++E G L + N H E
Sbjct: 73 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 132
Query: 182 --RAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
+ + + R ++ +HRDL N L +E++ +K DFGL+ +
Sbjct: 133 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHID 189
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
+ + +MAPE L R Y + DVWS GV+++ I G P+
Sbjct: 190 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 238
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 29/229 (12%)
Query: 81 DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
D+ GK LG G FG + + ++ + K+A + LK TE D+ D+ E+E+M
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-----------VNKGHYTE--- 181
+ + KH NI+ A +Y+++E G L + + N H E
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQL 147
Query: 182 --RAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
+ + + R ++ +HRDL N L +E++ +K DFGL+ +
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHID 204
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
+ + +MAPE L R Y + DVWS GV+++ I G P+
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 29/229 (12%)
Query: 81 DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
D+ GK LG G FG + + ++ + K+A + LK TE D+ D+ E+E+M
Sbjct: 20 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 79
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-----------VNKGHYTE--- 181
+ + KH NI+ A +Y+++E G L + + N H E
Sbjct: 80 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 139
Query: 182 --RAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
+ + + R ++ +HRDL N L +E++ +K DFGL+ +
Sbjct: 140 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHID 196
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
+ + +MAPE L R Y + DVWS GV+++ I G P+
Sbjct: 197 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 245
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 29/229 (12%)
Query: 81 DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
D+ GK LG G FG + + ++ + K+A + LK TE D+ D+ E+E+M
Sbjct: 21 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 80
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-----------VNKGHYTE--- 181
+ + KH NI+ A +Y+++E G L + + N H E
Sbjct: 81 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 140
Query: 182 --RAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
+ + + R ++ +HRDL N L +E++ +K DFGL+ +
Sbjct: 141 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHID 197
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
+ + +MAPE L R Y + DVWS GV+++ I G P+
Sbjct: 198 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 246
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
Query: 376 VVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVD 435
+AD L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D D
Sbjct: 3 AMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 62
Query: 436 GNGLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
GNG + EF+TM +K +++ + +AFR FDK+ +G+I
Sbjct: 63 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 104
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
D +I++ F + D D NG ++ EL+ + +G+K++D +V ++ AD+DG+G ++ +
Sbjct: 84 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 143
Query: 444 EFVTM 448
EFV M
Sbjct: 144 EFVQM 148
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 29/229 (12%)
Query: 81 DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
DK T GK LG G FG + + I+ + +A + LK TE D+ D+ E+E+M
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI----------------VNKGHY 179
+ + KH NI+ A +Y+++ G L + + V +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
T + + + R ++ +HRDL N L +EN+ +K DFGL+ +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNID 211
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
+ + +MAPE L R Y + DVWS GV+++ I G P+
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDG 436
+AD L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 437 NGLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
NG + EF+TM +K +++ + +AFR FDK+ +G+I
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 101
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 350 VSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEEL 409
V GN T +F M K K D +I++ F + D D NG ++ EL
Sbjct: 56 VDADGNGTIDFPEFLTMMARKMK---------DTDSEEEIREAFRVFDKDGNGYISAAEL 106
Query: 410 KDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTM 448
+ + +G+K++D +V ++ AD+DG+G ++ +EFV M
Sbjct: 107 RHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 145
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDG 436
+AD L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 437 NGLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
NG + EF+TM +K +++ + +AFR FDK+ +G+I
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 101
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 350 VSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEEL 409
V GN T +F M K K D +I++ F + D D NG ++ EL
Sbjct: 56 VDADGNGTIDFPEFLTMMARKMK---------DTDSEEEIREAFRVFDKDGNGYISAAEL 106
Query: 410 KDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTM 448
+ + +G+K++D +V ++ AD+DG+G ++ +EFV M
Sbjct: 107 RHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 145
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 29/229 (12%)
Query: 81 DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
D+ GK LG G FG + + ++ + K+A + LK TE D+ D+ E+E+M
Sbjct: 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 128
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-----------VNKGHYTE--- 181
+ + KH NI+ A +Y+++E G L + + N H E
Sbjct: 129 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 188
Query: 182 --RAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
+ + + R ++ +HRDL N L +E++ +K DFGL+ +
Sbjct: 189 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHID 245
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
+ + +MAPE L R Y + DVWS GV+++ I G P+
Sbjct: 246 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 294
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDG 436
+AD L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DG
Sbjct: 2 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 61
Query: 437 NGLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
NG + EF+TM +K +++ + +AFR FDK+ +G+I
Sbjct: 62 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 102
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 350 VSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEEL 409
V GN T +F M K K D +I++ F + D D NG ++ EL
Sbjct: 57 VDADGNGTIDFPEFLTMMARKMK---------DTDSEEEIREAFRVFDKDGNGYISAAEL 107
Query: 410 KDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTM 448
+ + +G+K++D +V ++ AD+DG+G ++ +EFV M
Sbjct: 108 RHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 146
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
AD L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 438 GLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
G + EF+TM +K +++ + +AFR FDK+ +G+I
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 100
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 42/65 (64%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
D +I++ F + D D NG ++ EL+ + +G+K++D +V ++ A++DG+G ++ +
Sbjct: 80 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYE 139
Query: 444 EFVTM 448
EFV M
Sbjct: 140 EFVQM 144
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
T +GRG FG H+ + +TG A KK+ E + E E+ L P
Sbjct: 77 THQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE--------ELVACAGL-SSPR 127
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTE-RAAAAVGKTILRIVKVCHENG 202
IV A + + + MEL EGG L I G E RA +G+ L ++ H
Sbjct: 128 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQA-LEGLEYLHTRR 186
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP---GEQFCE---IVGSPYYMAPE-V 255
++H D+K +N L + S+ S+ DFG ++ +P G+ I G+ +MAPE V
Sbjct: 187 ILHGDVKADNVLLS--SDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVV 244
Query: 256 LRRNYGPEIDVWSAGVIIYILLCGVPPF 283
+ + ++D+WS+ ++ +L G P+
Sbjct: 245 MGKPCDAKVDIWSSCCMMLHMLNGCHPW 272
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 108/255 (42%), Gaps = 38/255 (14%)
Query: 123 IDIDDVR-REVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELC--------EGGELFDRI 173
ID D+ E++++ HPN++ Y + +Y+ +ELC E + D
Sbjct: 67 IDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDE- 125
Query: 174 VNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFA----------DGSENSQ 223
N E ++ + I V H ++HRDLKP+N L + G+EN +
Sbjct: 126 -NLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLR 184
Query: 224 LKAIDFGLSIFFKPGEQFCEI-----VGSPYYMAPEVL----RRNYGPEIDVWSAGVIIY 274
+ DFGL G+ G+ + APE+L +R ID++S G + Y
Sbjct: 185 ILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFY 244
Query: 275 ILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPW---PKVSKEAKELVKNMLDPNPYNRL 330
+L G PF + IIRG + + EA +L+ M+D +P R
Sbjct: 245 YILSKGKHPFGDKYSR--ESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRP 302
Query: 331 TLEEVLENP--WIKN 343
T +VL +P W K+
Sbjct: 303 TAMKVLRHPLFWPKS 317
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 16/218 (7%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
D + ELG G G+ + +G A +K+ ++K I + + RE++++ H
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMA-RKLIHLEIKPAIR-NQIIRELQVL-HECN 72
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
P IV + A+ I + ME +GG L + E V +LR + E
Sbjct: 73 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLRE 132
Query: 201 -NGVMHRDLKPENFLFADGSENSQLKAIDFGLS--IFFKPGEQFCEIVGSPYYMAPEVLR 257
+ +MHRD+KP N L + ++K DFG+S + F VG+ YMAPE L+
Sbjct: 133 KHQIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMAPERLQ 186
Query: 258 -RNYGPEIDVWSAGVIIYILLCG---VPPFWAETEEGI 291
+Y + D+WS G+ + L G +PP A+ E I
Sbjct: 187 GTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAI 224
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 108/255 (42%), Gaps = 38/255 (14%)
Query: 123 IDIDDVR-REVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELC--------EGGELFDRI 173
ID D+ E++++ HPN++ Y + +Y+ +ELC E + D
Sbjct: 67 IDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDE- 125
Query: 174 VNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFA----------DGSENSQ 223
N E ++ + I V H ++HRDLKP+N L + G+EN +
Sbjct: 126 -NLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLR 184
Query: 224 LKAIDFGLSIFFKPGEQFCEI-----VGSPYYMAPEVL----RRNYGPEIDVWSAGVIIY 274
+ DFGL G+ G+ + APE+L +R ID++S G + Y
Sbjct: 185 ILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFY 244
Query: 275 ILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPW---PKVSKEAKELVKNMLDPNPYNRL 330
+L G PF + IIRG + + EA +L+ M+D +P R
Sbjct: 245 YILSKGKHPFGDKYSR--ESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRP 302
Query: 331 TLEEVLENP--WIKN 343
T +VL +P W K+
Sbjct: 303 TAMKVLRHPLFWPKS 317
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDG 436
+AD L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 437 NGLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
NG + EF+TM +K +++ + +AFR FDK+ +G+I
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 101
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 350 VSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEEL 409
V GN T +F M K K D +I++ F + D D NG ++ EL
Sbjct: 56 VDADGNGTIDFPEFLTMMARKMK---------DTDSEEEIREAFRVFDKDGNGYISAAEL 106
Query: 410 KDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTM 448
+ + +G+K++D +V ++ AD+DG+G ++ +EFV M
Sbjct: 107 RHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 145
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
AD L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DGN
Sbjct: 7 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 66
Query: 438 GLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
G + EF+TM +K +++ + +AFR FDK+ +G+I
Sbjct: 67 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 106
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 350 VSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEEL 409
V GN T +F M K K D +I++ F + D D NG ++ EL
Sbjct: 61 VDADGNGTIDFPEFLTMMARKMK---------DTDSEEEIREAFRVFDKDGNGYISAAEL 111
Query: 410 KDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTM 448
+ + +G+K++D +V ++ AD+DG+G ++ +EFV M
Sbjct: 112 RHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 150
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
AD L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 438 GLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
G + EF+TM +K +++ + +AFR FDK+ +G+I
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 100
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 350 VSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEEL 409
V GN T +F M K K D +I++ F + D D NG ++ EL
Sbjct: 55 VDADGNGTIDFPEFLTMMARKMK---------DTDSEEEIREAFRVFDKDGNGYISAAEL 105
Query: 410 KDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTM 448
+ + +G+K++D +V ++ AD+DG+G ++ +EFV M
Sbjct: 106 RHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 144
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDG 436
+AD L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 437 NGLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
NG + EF+TM +K +++ + +AFR FDK+ +G+I
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 101
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
D +I++ F + D D NG ++ EL+ + +G+K++D +V ++ AD+DG+G ++ +
Sbjct: 81 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQVNYE 140
Query: 444 EFVTM 448
EFV M
Sbjct: 141 EFVQM 145
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNG 438
D L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 439 LLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
+ EF+TM +K +++ + +AFR FDK+ +G+I
Sbjct: 363 TIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYI 401
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
D +I++ F + D D NG ++ EL+ + +G+K++D +V ++ AD+DG+G ++ +
Sbjct: 381 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Query: 444 EFVTM 448
EFV M
Sbjct: 441 EFVQM 445
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNG 438
D L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DGNG
Sbjct: 266 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 325
Query: 439 LLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
+ EF+TM +K +++ + +AFR FDK+ +G+I
Sbjct: 326 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 364
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
D +I++ F + D D NG ++ EL+ + +G+K++D +V ++ AD+DG+G ++ +
Sbjct: 344 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 403
Query: 444 EFVTM 448
EFV M
Sbjct: 404 EFVQM 408
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNG 438
D L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DGNG
Sbjct: 269 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 328
Query: 439 LLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
+ EF+TM +K +++ + +AFR FDK+ +G+I
Sbjct: 329 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 367
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
D +I++ F + D D NG ++ EL+ + +G+K++D +V ++ AD+DG+G ++ +
Sbjct: 347 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 406
Query: 444 EFVTM 448
EFV M
Sbjct: 407 EFVQM 411
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
AD L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DGN
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 438 GLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
G + EF+TM +K +++ + +AFR FDK+ +G+I
Sbjct: 62 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 101
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 350 VSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEEL 409
V GN T +F M K K D +I++ F + D D NG ++ EL
Sbjct: 56 VDADGNGTIDFPEFLTMMARKMK---------DTDSEEEIREAFRVFDKDGNGYISAAEL 106
Query: 410 KDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTM 448
+ + +G+ ++D +V ++ AD+DG+G ++ +EFV M
Sbjct: 107 RHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQM 145
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
AD L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 438 GLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
G + EF+TM +K +++ + +AFR FDK+ +G+I
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 100
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 350 VSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEEL 409
V GN T +F M K K D +I++ F + D D NG ++ EL
Sbjct: 55 VDADGNGTIDFPEFLTMMARKMK---------DTDSEEEIREAFRVFDKDGNGYISAAEL 105
Query: 410 KDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTM 448
+ + +G+ ++D +V ++ AD+DG+G ++ +EFV M
Sbjct: 106 RHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQM 144
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
AD L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 438 GLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
G + EF+TM +K +++ + +AFR FDK+ +G+I
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 100
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 350 VSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEEL 409
V GN T +F M K K D +I++ F + D D NG ++ EL
Sbjct: 55 VDADGNGTIDFPEFLTMMARKMK---------DTDSEEEIREAFRVFDKDGNGYISAAEL 105
Query: 410 KDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTM 448
+ + +G+K++D +V ++ AD+DG+G ++ +EFV M
Sbjct: 106 RHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 144
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 29/229 (12%)
Query: 81 DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
D+ GK LG G FG + + ++ + K+A + LK TE D+ D+ E+E+M
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-----------VNKGHYTE--- 181
+ + KH NI+ A +Y+++E G L + + N H E
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQL 147
Query: 182 --RAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
+ + + R ++ +HRDL N L +E++ +K DFGL+ +
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHID 204
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
+ +MAPE L R Y + DVWS GV+++ I G P+
Sbjct: 205 XXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNG 438
D L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DGNG
Sbjct: 269 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 328
Query: 439 LLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
+ EF+TM +K +++ + +AFR FDK+ +G+I
Sbjct: 329 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 367
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
D +I++ F + D D NG ++ EL+ + +G+K++D +V ++ AD+DG+G ++ +
Sbjct: 347 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 406
Query: 444 EFVTM 448
EFV M
Sbjct: 407 EFVQM 411
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNG 438
D L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 439 LLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
+ EF+TM +K +++ + +AFR FDK+ +G+I
Sbjct: 363 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 401
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
D +I++ F + D D NG ++ EL+ + +G+K++D +V ++ AD+DG+G ++ +
Sbjct: 381 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Query: 444 EFVTM 448
EFV M
Sbjct: 441 EFVQM 445
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNG 438
D L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 439 LLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
+ EF+TM +K +++ + +AFR FDK+ +G+I
Sbjct: 363 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 401
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
D +I++ F + D D NG ++ EL+ + +G+K++D +V ++ AD+DG+G ++ +
Sbjct: 381 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Query: 444 EFVTM 448
EFV M
Sbjct: 441 EFVQM 445
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 122/272 (44%), Gaps = 36/272 (13%)
Query: 83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
Y F ++LG G F + G YA K+I + + D ++ +RE ++ R L HP
Sbjct: 31 YLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE---QQDREEAQREADMHR-LFNHP 86
Query: 143 NI---VTY--KEAYEDKDAIYLVMELCEGGELF---DRIVNKGHY-TERAAAAVGKTILR 193
NI V Y +E +A +L++ + G L+ +R+ +KG++ TE + I R
Sbjct: 87 NILRLVAYCLRERGAKHEA-WLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICR 145
Query: 194 IVKVCHENGVMHRDLKPENFLFAD---------GSENSQLKAIDFGLSIFFKP--GEQFC 242
++ H G HRDLKP N L D GS N ++ Q C
Sbjct: 146 GLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRC 205
Query: 243 EIVGSPYYMAPEVLRRNYGPEI----DVWSAGVIIYILLCGVPPFWAETEEGIAHAI-IR 297
I Y APE+ I DVWS G ++Y ++ G P+ ++G + A+ ++
Sbjct: 206 TIS----YRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQ 261
Query: 298 GKIDFERDPWPKVSKEAKELVKNMLDPNPYNR 329
++ + P+ S +L+ +M+ +P+ R
Sbjct: 262 NQLSIPQS--PRHSSALWQLLNSMMTVDPHQR 291
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNG 438
D L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DGNG
Sbjct: 304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 363
Query: 439 LLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
+ EF+TM +K +++ + +AFR FDK+ +G+I
Sbjct: 364 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 402
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
D +I++ F + D D NG ++ EL+ + +G+K++D +V ++ AD+DG+G ++ +
Sbjct: 382 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 441
Query: 444 EFVTM 448
EFV M
Sbjct: 442 EFVQM 446
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNG 438
D L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 439 LLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
+ EF+TM +K +++ + +AFR FDK+ +G+I
Sbjct: 363 TIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYI 401
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
D +I++ F + D D NG ++ EL+ + +G+K++D +V ++ AD+DG+G ++ +
Sbjct: 381 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Query: 444 EFVTM 448
EFV M
Sbjct: 441 EFVQM 445
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 102/211 (48%), Gaps = 17/211 (8%)
Query: 85 FGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI----DDVRREVEIMRHLPK 140
+ K++G+G FG+ H+ ++ A K + + E ++ + +REV IM +L
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-N 81
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA--VGKTILRIVKVC 198
HPNIV + +VME G+L+ R+++K H + + + L I +
Sbjct: 82 HPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 199 HENG-VMHRDLKPENFLFADGSENSQL--KAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV 255
++N ++HRDL+ N EN+ + K DFG S + ++G+ +MAPE
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ--QSVHSVSGLLGNFQWMAPET 197
Query: 256 L---RRNYGPEIDVWSAGVIIYILLCGVPPF 283
+ +Y + D +S +I+Y +L G PF
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 88 ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
ELG G G+ + +G A +K+ ++K I + + RE++++ H P IV +
Sbjct: 75 ELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIR-NQIIRELQVL-HECNSPYIVGF 131
Query: 148 KEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE-NGVMHR 206
A+ I + ME +GG L + G E+ V +++ + E + +MHR
Sbjct: 132 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 191
Query: 207 DLKPENFLFADGSENSQLKAIDFGLS--IFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPE 263
D+KP N L + ++K DFG+S + F VG+ YM+PE L+ +Y +
Sbjct: 192 DVKPSNILV---NSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMSPERLQGTHYSVQ 245
Query: 264 IDVWSAGVIIYILLCG---VPP 282
D+WS G+ + + G +PP
Sbjct: 246 SDIWSMGLSLVEMAVGRYPIPP 267
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 29/229 (12%)
Query: 81 DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
DK T GK LG G FG + + I+ + +A + LK TE D+ D+ E+E+M
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI----------------VNKGHY 179
+ + KH NI+ A +Y+++ G L + + V +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
T + + + R ++ +HRDL N L +EN+ +K DFGL+ +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNID 211
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
+ + +MAPE L R Y + DVWS GV+++ I G P+
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 85 FGKELGRGEFGITHQC----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
F ++LG+G FG C + TGE A KK+ TE + D RE+EI++ L +
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKSL-Q 69
Query: 141 HPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKV 197
H NIV YK + + L+ME G L D + +K I + ++
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 129
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVG---SP-YYMAP 253
+HRDL N L + +++K DFGL+ ++F ++ SP ++ AP
Sbjct: 130 LGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAP 186
Query: 254 EVLRRN-YGPEIDVWSAGVIIYILLCGV 280
E L + + DVWS GV++Y L +
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFTYI 214
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 102/211 (48%), Gaps = 17/211 (8%)
Query: 85 FGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI----DDVRREVEIMRHLPK 140
+ K++G+G FG+ H+ ++ A K + + E ++ + +REV IM +L
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-N 81
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA--VGKTILRIVKVC 198
HPNIV + +VME G+L+ R+++K H + + + L I +
Sbjct: 82 HPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 199 HENG-VMHRDLKPENFLFADGSENSQL--KAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV 255
++N ++HRDL+ N EN+ + K DF LS + ++G+ +MAPE
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ--QSVHSVSGLLGNFQWMAPET 197
Query: 256 L---RRNYGPEIDVWSAGVIIYILLCGVPPF 283
+ +Y + D +S +I+Y +L G PF
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
AD L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 438 GLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
G + EF+TM + ++I +AFR FDK+ +GFI
Sbjct: 61 GTIDFPEFLTMMARKMKDSEEEI-REAFRVFDKDGNGFI 98
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 88 ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
ELG G G+ + +G A +K+ ++K I + + RE++++ H P IV +
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIR-NQIIRELQVL-HECNSPYIVGF 69
Query: 148 KEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE-NGVMHR 206
A+ I + ME +GG L + G E+ V +++ + E + +MHR
Sbjct: 70 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 129
Query: 207 DLKPENFLFADGSENSQLKAIDFGLS--IFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPE 263
D+KP N L + ++K DFG+S + F VG+ YM+PE L+ +Y +
Sbjct: 130 DVKPSNILV---NSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMSPERLQGTHYSVQ 183
Query: 264 IDVWSAGVIIYILLCG---VPP 282
D+WS G+ + + G +PP
Sbjct: 184 SDIWSMGLSLVEMAVGRYPIPP 205
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 88 ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
ELG G G+ + +G A +K+ ++K I + + RE++++ H P IV +
Sbjct: 40 ELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIR-NQIIRELQVL-HECNSPYIVGF 96
Query: 148 KEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE-NGVMHR 206
A+ I + ME +GG L + G E+ V +++ + E + +MHR
Sbjct: 97 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 156
Query: 207 DLKPENFLFADGSENSQLKAIDFGLS--IFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPE 263
D+KP N L + ++K DFG+S + F VG+ YM+PE L+ +Y +
Sbjct: 157 DVKPSNILV---NSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMSPERLQGTHYSVQ 210
Query: 264 IDVWSAGVIIYILLCG---VPP 282
D+WS G+ + + G +PP
Sbjct: 211 SDIWSMGLSLVEMAVGRYPIPP 232
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 88 ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
ELG G G+ + +G A +K+ ++K I + + RE++++ H P IV +
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIR-NQIIRELQVL-HECNSPYIVGF 69
Query: 148 KEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE-NGVMHR 206
A+ I + ME +GG L + G E+ V +++ + E + +MHR
Sbjct: 70 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 129
Query: 207 DLKPENFLFADGSENSQLKAIDFGLS--IFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPE 263
D+KP N L + ++K DFG+S + F VG+ YM+PE L+ +Y +
Sbjct: 130 DVKPSNILV---NSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMSPERLQGTHYSVQ 183
Query: 264 IDVWSAGVIIYILLCG---VPP 282
D+WS G+ + + G +PP
Sbjct: 184 SDIWSMGLSLVEMAVGRYPIPP 205
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 88 ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
ELG G G+ + +G A +K+ ++K I + + RE++++ H P IV +
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIR-NQIIRELQVL-HECNSPYIVGF 69
Query: 148 KEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE-NGVMHR 206
A+ I + ME +GG L + G E+ V +++ + E + +MHR
Sbjct: 70 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 129
Query: 207 DLKPENFLFADGSENSQLKAIDFGLS--IFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPE 263
D+KP N L + ++K DFG+S + F VG+ YM+PE L+ +Y +
Sbjct: 130 DVKPSNILV---NSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMSPERLQGTHYSVQ 183
Query: 264 IDVWSAGVIIYILLCG---VPP 282
D+WS G+ + + G +PP
Sbjct: 184 SDIWSMGLSLVEMAVGRYPIPP 205
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 88 ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
ELG G G+ + +G A +K+ ++K I + + RE++++ H P IV +
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIR-NQIIRELQVL-HECNSPYIVGF 69
Query: 148 KEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE-NGVMHR 206
A+ I + ME +GG L + G E+ V +++ + E + +MHR
Sbjct: 70 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 129
Query: 207 DLKPENFLFADGSENSQLKAIDFGLS--IFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPE 263
D+KP N L + ++K DFG+S + F VG+ YM+PE L+ +Y +
Sbjct: 130 DVKPSNILV---NSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMSPERLQGTHYSVQ 183
Query: 264 IDVWSAGVIIYILLCG---VPP 282
D+WS G+ + + G +PP
Sbjct: 184 SDIWSMGLSLVEMAVGRYPIPP 205
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 22/221 (9%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
+D+Y +G+G FG + ++ E A K I +K ++ + EV ++ +
Sbjct: 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK----AFLNQAQIEVRLLELMN 108
Query: 140 KHPN-----IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKG------HYTERAAAAVG 188
KH IV K + ++ + LV E+ L+D + N + T + A +
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYN-LYDLLRNTNFRGVSLNLTRKFAQQMC 167
Query: 189 KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP 248
+L + E ++H DLKPEN L + + S +K +DFG S + G++ + + S
Sbjct: 168 TALLFLA--TPELSIIHCDLKPENILLCN-PKRSAIKIVDFGSSC--QLGQRIYQXIQSR 222
Query: 249 YYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
+Y +PEVL Y ID+WS G I+ + G P F E
Sbjct: 223 FYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
+ NL ++Q+A+ K+ F + D D NG ++ EL + +G S+ +V LM DVDGN
Sbjct: 2 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 61
Query: 438 GLLSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
+ EF+ MS LK ++ L +AF+ FDKN G I
Sbjct: 62 HQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLI 101
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 382 PQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDV-KMLMEAADVDGNGLL 440
D ++ + F + D + +G ++ ELK L IG+K++D +V ML E + DG+G +
Sbjct: 79 SNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS--DGSGEI 136
Query: 441 SCDEFVTM 448
+ +F +
Sbjct: 137 NIQQFAAL 144
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
+ NL ++Q+A+ K+ F + D D NG ++ EL + +G S+ +V LM DVDGN
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 60
Query: 438 GLLSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
+ EF+ MS LK ++ L +AF+ FDKN G I
Sbjct: 61 HQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLI 100
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 22/221 (9%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
+D+Y +G+G FG + ++ E A K I +K ++ + EV ++ +
Sbjct: 34 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK----AFLNQAQIEVRLLELMN 89
Query: 140 KHPN-----IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKG------HYTERAAAAVG 188
KH IV K + ++ + LV E+ L+D + N + T + A +
Sbjct: 90 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYN-LYDLLRNTNFRGVSLNLTRKFAQQMC 148
Query: 189 KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP 248
+L + E ++H DLKPEN L + + S +K +DFG S + G++ + + S
Sbjct: 149 TALLFLA--TPELSIIHCDLKPENILLCN-PKRSAIKIVDFGSSC--QLGQRIYQXIQSR 203
Query: 249 YYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
+Y +PEVL Y ID+WS G I+ + G P F E
Sbjct: 204 FYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 244
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
AD L +Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DGN
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 438 GLLSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
G + EF+ M+ +K +++ L +AFR FDK+ +GFI
Sbjct: 61 GTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFI 100
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 41/63 (65%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
D ++K+ F + D D NG ++ EL+ + +G+K++D +V ++ ADVDG+G ++ +
Sbjct: 80 DSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYE 139
Query: 444 EFV 446
EFV
Sbjct: 140 EFV 142
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
AD L +Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DGN
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 438 GLLSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
G + EF+ M+ +K +++ L +AFR FDK+ +GFI
Sbjct: 61 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFI 100
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 41/63 (65%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
D ++K+ F + D D NG ++ EL+ + +G+K++D +V ++ ADVDG+G ++ +
Sbjct: 80 DSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYE 139
Query: 444 EFV 446
EFV
Sbjct: 140 EFV 142
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 94/225 (41%), Gaps = 33/225 (14%)
Query: 85 FGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD---VRREVEIMRHLPKH 141
FGK LG G FG + G+ A K+A + LK+ D+ + E++IM HL +H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTER-AAAAVGKTILRIVKVCH- 199
NIV A + ++ E C G+L + + K E A A+ + L + H
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHF 169
Query: 200 ------------ENGVMHRDLKPENFLFADGSENSQLKAIDFGL-------SIFFKPGEQ 240
+HRD+ N L +G K DFGL S + G
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA---KIGDFGLARDIMNDSNYIVKGNA 226
Query: 241 FCEIVGSPYYMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
+ +MAPE + Y + DVWS G++++ I G+ P+
Sbjct: 227 RLPVK----WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Query: 377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDG 436
+ D L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DG
Sbjct: 300 LPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 359
Query: 437 NGLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
+G + EF+TM +K +++ + +AFR FDK+ +G+I
Sbjct: 360 DGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYI 400
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
D +I++ F + D D NG ++ EL+ + +G+K++D +V ++ AD+DG+G ++ +
Sbjct: 380 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 439
Query: 444 EFVTM 448
EFV M
Sbjct: 440 EFVQM 444
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Query: 377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDG 436
+ D L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DG
Sbjct: 300 LPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 359
Query: 437 NGLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
+G + EF+TM +K +++ + +AFR FDK+ +G+I
Sbjct: 360 DGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYI 400
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
D +I++ F + D D NG ++ EL+ + +G+K++D +V ++ AD+DG+G ++ +
Sbjct: 380 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 439
Query: 444 EFVTM 448
EFV M
Sbjct: 440 EFVQM 444
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 115/260 (44%), Gaps = 21/260 (8%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
T +LG G++G ++ + T A K + ++ + ++++ +E +M+ + KHPN
Sbjct: 14 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 68
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
+V + Y++ E G L D R N+ + + I ++ +
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
+HRDL N L EN +K DFGLS G+ F G+ + + APE L
Sbjct: 129 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTFTAHAGAKFPIKWTAPESLAY 184
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE-AK 315
N + + DVW+ GV+++ I G+ P+ + + ++ ER P+ E
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMSPY-PGIDPSQVYELLEKDYRMER---PEGCPEKVY 240
Query: 316 ELVKNMLDPNPYNRLTLEEV 335
EL++ NP +R + E+
Sbjct: 241 ELMRACWQWNPSDRPSFAEI 260
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
AD L ++Q+ + K+ F + D D +G +T EL + +GQ ++ +++ +M D DGN
Sbjct: 1 ADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGN 60
Query: 438 GLLSCDEFV-TMSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
G + EF+ M+ +K N++ + +AFR FDK+ +GF+
Sbjct: 61 GTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFV 100
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 43/67 (64%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
D +I++ F + D D NG ++ EL+ + +G+K+SD +V ++ AAD DG+G ++ +
Sbjct: 80 DNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYE 139
Query: 444 EFVTMSV 450
EFV + V
Sbjct: 140 EFVRVLV 146
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNG 438
D L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DG+G
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 362
Query: 439 LLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
+ EF+TM +K +++ + +AFR FDK+ +G+I
Sbjct: 363 TIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYI 401
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
D +I++ F + D D NG ++ EL+ + +G+K++D +V ++ AD+DG+G ++ +
Sbjct: 381 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Query: 444 EFVTM 448
EFV M
Sbjct: 441 EFVQM 445
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 108/259 (41%), Gaps = 42/259 (16%)
Query: 123 IDIDDVR-REVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELC--------EGGELFDRI 173
ID D+ E++++ HPN++ Y + +Y+ +ELC E + D
Sbjct: 49 IDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDE- 107
Query: 174 VNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFA----------DGSENSQ 223
N E ++ + I V H ++HRDLKP+N L + G+EN +
Sbjct: 108 -NLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLR 166
Query: 224 LKAIDFGLSIFFKPGEQFCEI-----VGSPYYMAPEVL--------RRNYGPEIDVWSAG 270
+ DFGL G+ G+ + APE+L +R ID++S G
Sbjct: 167 ILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMG 226
Query: 271 VIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPW---PKVSKEAKELVKNMLDPNP 326
+ Y +L G PF + IIRG + + EA +L+ M+D +P
Sbjct: 227 CVFYYILSKGKHPFGDKYSR--ESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDP 284
Query: 327 YNRLTLEEVLENP--WIKN 343
R T +VL +P W K+
Sbjct: 285 LKRPTAMKVLRHPLFWPKS 303
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 380 NLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGL 439
NL ++Q+A+ K+ F + D D NG ++ EL + +G S+ +V LM DVDGN
Sbjct: 3 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ 62
Query: 440 LSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
+ EF+ MS LK ++ L +AF+ FDKN G I
Sbjct: 63 IEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLI 100
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 399 DKNGD--LTFEELKDGLNMIGQKVSDPDV-KMLMEAADVDGNGLLSCDEFVTM 448
DKNGD ++ ELK L IG+K++D +V ML E + DG+G ++ +F +
Sbjct: 93 DKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS--DGSGEINIQQFAAL 143
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
AD L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DG+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 60
Query: 438 GLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
G + EF+TM +K +++ + +AFR FDK+ +G+I
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 100
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
D +I++ F + D D NG ++ EL+ + +G+K++D +V ++ AD+DG+G ++ +
Sbjct: 80 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Query: 444 EFVTM 448
EFV M
Sbjct: 140 EFVQM 144
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 122/271 (45%), Gaps = 20/271 (7%)
Query: 85 FGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNI 144
F E+GRG F ++ + ET A ++ KL T+ + + E E ++ L +HPNI
Sbjct: 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEXLKGL-QHPNI 87
Query: 145 VTYKEAYED----KDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
V + +++E K I LV EL G L + + + + IL+ ++ H
Sbjct: 88 VRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHT 147
Query: 201 NG--VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE-IVGSPYYMAPEVLR 257
++HRDLK +N +F G S +K D GL+ + F + ++G+P + APE
Sbjct: 148 RTPPIIHRDLKCDN-IFITGPTGS-VKIGDLGLATLKRAS--FAKAVIGTPEFXAPEXYE 203
Query: 258 RNYGPEIDVWSAGVIIYILLCGVPPFW-AETEEGIAHAIIRG--KIDFERDPWPKVSKEA 314
Y +DV++ G P+ + I + G F++ P E
Sbjct: 204 EKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIP----EV 259
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKNDN 345
KE+++ + N R +++++L + + + +
Sbjct: 260 KEIIEGCIRQNKDERYSIKDLLNHAFFQEET 290
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNG 438
D L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DGNG
Sbjct: 1 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 60
Query: 439 LLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
+ EF+TM +K +++ + +AFR FDK+ +G+I
Sbjct: 61 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 99
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 350 VSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEEL 409
V GN T +F M K K D +I++ F + D D NG ++ EL
Sbjct: 54 VDADGNGTIDFPEFLTMMARKMK---------DTDSEEEIREAFRVFDKDGNGYISAAEL 104
Query: 410 KDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTM 448
+ + +G+K++D +V ++ AD+DG+G ++ +EFV M
Sbjct: 105 RHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 143
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 67/114 (58%), Gaps = 2/114 (1%)
Query: 364 SIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDP 423
++M K K K D L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++
Sbjct: 280 AVMQK-KTKGWEPTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA 338
Query: 424 DVKMLMEAADVDGNGLLSCDEF-VTMSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
+++ ++ D DG+G + EF + M+ +K +++ + +AFR FDK+ +G+I
Sbjct: 339 ELQDMINEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYI 392
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
D +I++ F + D D NG ++ EL+ + +G+K++D +V ++ AD+DG+G ++ +
Sbjct: 372 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 431
Query: 444 EFVTM 448
EFV M
Sbjct: 432 EFVQM 436
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNG 438
D L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DG+G
Sbjct: 302 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 361
Query: 439 LLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
+ EF+TM +K +++ + +AFR FDK+ +G+I
Sbjct: 362 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 400
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
D +I++ F + D D NG ++ EL+ + +G+K++D +V ++ AD+DG+G ++ +
Sbjct: 380 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 439
Query: 444 EFVTM 448
EFV M
Sbjct: 440 EFVQM 444
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 108/259 (41%), Gaps = 42/259 (16%)
Query: 123 IDIDDVR-REVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELC--------EGGELFDRI 173
ID D+ E++++ HPN++ Y + +Y+ +ELC E + D
Sbjct: 49 IDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDE- 107
Query: 174 VNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFA----------DGSENSQ 223
N E ++ + I V H ++HRDLKP+N L + G+EN +
Sbjct: 108 -NLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLR 166
Query: 224 LKAIDFGLSIFFKPGEQFCEI-----VGSPYYMAPEVL--------RRNYGPEIDVWSAG 270
+ DFGL G+ G+ + APE+L +R ID++S G
Sbjct: 167 ILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMG 226
Query: 271 VIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPW---PKVSKEAKELVKNMLDPNP 326
+ Y +L G PF + IIRG + + EA +L+ M+D +P
Sbjct: 227 CVFYYILSKGKHPFGDKYSR--ESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDP 284
Query: 327 YNRLTLEEVLENP--WIKN 343
R T +VL +P W K+
Sbjct: 285 LKRPTAMKVLRHPLFWPKS 303
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 33/222 (14%)
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI---VKVCH 199
N V + K +Y+ M+LC L D + + +R ++I V+ H
Sbjct: 122 NTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLH 181
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI-------------VG 246
G+MHRDLKP N F + + +K DFGL E+ + VG
Sbjct: 182 SKGLMHRDLKPSNIFF---TMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVG 238
Query: 247 SPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERD 305
+ YM+PE + NY ++D++S G+I++ LL F + E +R D
Sbjct: 239 TKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYS---FSTQMER------VRIITDVRNL 289
Query: 306 PWPKV--SKEAKE--LVKNMLDPNPYNRLTLEEVLENPWIKN 343
+P + K +E +V++ML P+P R +++EN +N
Sbjct: 290 KFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFEN 331
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 85 FGKELGRGEFGITHQC----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
F ++LG+G FG C + TGE A KK+ TE + D RE+EI++ L +
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKSL-Q 72
Query: 141 HPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
H NIV YK + + L+ME G L D + + H + + +I K
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QAHAERIDHIKLLQYTSQICKGM 130
Query: 199 HENGV---MHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP-----YY 250
G +HRDL N L + +++K DFGL+ P ++ V P ++
Sbjct: 131 EYLGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFW 186
Query: 251 MAPEVLRRN-YGPEIDVWSAGVIIYILLCGV 280
APE L + + DVWS GV++Y L +
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYELFTYI 217
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 85 FGKELGRGEFGITHQC----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
F ++LG+G FG C + TGE A KK+ TE + D RE+EI++ L +
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKSL-Q 69
Query: 141 HPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKV 197
H NIV YK + + L+ME G L D + +K I + ++
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 129
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP-----YYMA 252
+HRDL N L + +++K DFGL+ P ++ V P ++ A
Sbjct: 130 LGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYA 185
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGV 280
PE L + + DVWS GV++Y L +
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELFTYI 214
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 85 FGKELGRGEFGITHQC----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
F ++LG+G FG C + TGE A KK+ TE + D RE+EI++ L +
Sbjct: 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKSL-Q 100
Query: 141 HPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKV 197
H NIV YK + + L+ME G L D + +K I + ++
Sbjct: 101 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 160
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP-----YYMA 252
+HRDL N L + +++K DFGL+ P ++ V P ++ A
Sbjct: 161 LGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYA 216
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGV 280
PE L + + DVWS GV++Y L +
Sbjct: 217 PESLTESKFSVASDVWSFGVVLYELFTYI 245
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 85 FGKELGRGEFGITHQC----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
F ++LG+G FG C + TGE A KK+ TE + D RE+EI++ L +
Sbjct: 21 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKSL-Q 76
Query: 141 HPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKV 197
H NIV YK + + L+ME G L D + +K I + ++
Sbjct: 77 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 136
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP-----YYMA 252
+HRDL N L + +++K DFGL+ P ++ V P ++ A
Sbjct: 137 LGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYA 192
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGV 280
PE L + + DVWS GV++Y L +
Sbjct: 193 PESLTESKFSVASDVWSFGVVLYELFTYI 221
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 85 FGKELGRGEFGITHQC----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
F ++LG+G FG C + TGE A KK+ TE + D RE+EI++ L +
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKSL-Q 69
Query: 141 HPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKV 197
H NIV YK + + L+ME G L D + +K I + ++
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 129
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP-----YYMA 252
+HRDL N L + +++K DFGL+ P ++ V P ++ A
Sbjct: 130 LGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYA 185
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGV 280
PE L + + DVWS GV++Y L +
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELFTYI 214
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 85 FGKELGRGEFGITHQC----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
F ++LG+G FG C + TGE A KK+ TE + D RE+EI++ L +
Sbjct: 18 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKSL-Q 73
Query: 141 HPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKV 197
H NIV YK + + L+ME G L D + +K I + ++
Sbjct: 74 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 133
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP-----YYMA 252
+HRDL N L + +++K DFGL+ P ++ V P ++ A
Sbjct: 134 LGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYA 189
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGV 280
PE L + + DVWS GV++Y L +
Sbjct: 190 PESLTESKFSVASDVWSFGVVLYELFTYI 218
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 85 FGKELGRGEFGITHQC----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
F ++LG+G FG C + TGE A KK+ TE + D RE+EI++ L +
Sbjct: 13 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKSL-Q 68
Query: 141 HPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKV 197
H NIV YK + + L+ME G L D + +K I + ++
Sbjct: 69 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 128
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP-----YYMA 252
+HRDL N L + +++K DFGL+ P ++ V P ++ A
Sbjct: 129 LGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYA 184
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGV 280
PE L + + DVWS GV++Y L +
Sbjct: 185 PESLTESKFSVASDVWSFGVVLYELFTYI 213
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 85 FGKELGRGEFGITHQC----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
F ++LG+G FG C + TGE A KK+ TE + D RE+EI++ L +
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKSL-Q 72
Query: 141 HPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKV 197
H NIV YK + + L+ME G L D + +K I + ++
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 132
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP-----YYMA 252
+HRDL N L + +++K DFGL+ P ++ V P ++ A
Sbjct: 133 LGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYA 188
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGV 280
PE L + + DVWS GV++Y L +
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYELFTYI 217
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 85 FGKELGRGEFGITHQC----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
F ++LG+G FG C + TGE A KK+ TE + D RE+EI++ L +
Sbjct: 19 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKSL-Q 74
Query: 141 HPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKV 197
H NIV YK + + L+ME G L D + +K I + ++
Sbjct: 75 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 134
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP-----YYMA 252
+HRDL N L + +++K DFGL+ P ++ V P ++ A
Sbjct: 135 LGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYA 190
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGV 280
PE L + + DVWS GV++Y L +
Sbjct: 191 PESLTESKFSVASDVWSFGVVLYELFTYI 219
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 85 FGKELGRGEFGITHQC----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
F ++LG+G FG C + TGE A KK+ TE + D RE+EI++ L +
Sbjct: 20 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKSL-Q 75
Query: 141 HPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKV 197
H NIV YK + + L+ME G L D + +K I + ++
Sbjct: 76 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 135
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP-----YYMA 252
+HRDL N L + +++K DFGL+ P ++ V P ++ A
Sbjct: 136 LGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYA 191
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGV 280
PE L + + DVWS GV++Y L +
Sbjct: 192 PESLTESKFSVASDVWSFGVVLYELFTYI 220
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 96/207 (46%), Gaps = 16/207 (7%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
T +LG G++G ++ + T A K + ++ + ++++ +E +M+ + KHPN
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 70
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
+V + Y+++E G L D R N+ + + I ++ +
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
+HRDL N L EN +K DFGLS G+ + G+ + + APE L
Sbjct: 131 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 186
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
N + + DVW+ GV+++ I G+ P+
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 101/221 (45%), Gaps = 22/221 (9%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
+D+Y +G+G FG + ++ E A K I +K ++ + EV ++ +
Sbjct: 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK----AFLNQAQIEVRLLELMN 108
Query: 140 KHPN-----IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKG------HYTERAAAAVG 188
KH IV K + ++ + LV E+ L+D + N + T + A +
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYN-LYDLLRNTNFRGVSLNLTRKFAQQMC 167
Query: 189 KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP 248
+L + E ++H DLKPEN L + + +K +DFG S + G++ + + S
Sbjct: 168 TALLFLA--TPELSIIHCDLKPENILLCN-PKRXAIKIVDFGSSC--QLGQRIYQXIQSR 222
Query: 249 YYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
+Y +PEVL Y ID+WS G I+ + G P F E
Sbjct: 223 FYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 85 FGKELGRGEFGITHQC----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
F ++LG+G FG C + TGE A KK+ TE + D RE+EI++ L +
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSL-Q 87
Query: 141 HPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKV 197
H NIV YK + + L+ME G L D + +K I + ++
Sbjct: 88 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 147
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP-----YYMA 252
+HRDL N L + +++K DFGL+ P ++ V P ++ A
Sbjct: 148 LGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYA 203
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGV 280
PE L + + DVWS GV++Y L +
Sbjct: 204 PESLTESKFSVASDVWSFGVVLYELFTYI 232
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 96/207 (46%), Gaps = 16/207 (7%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
T +LG G++G ++ + T A K + ++ + ++++ +E +M+ + KHPN
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 70
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
+V + Y+++E G L D R N+ + + I ++ +
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
+HRDL N L EN +K DFGLS G+ + G+ + + APE L
Sbjct: 131 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 186
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
N + + DVW+ GV+++ I G+ P+
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 85 FGKELGRGEFGITHQC----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
F ++LG+G FG C + TGE A KK+ TE + D RE+EI++ L +
Sbjct: 12 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKSL-Q 67
Query: 141 HPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKV 197
H NIV YK + + L+ME G L D + +K I + ++
Sbjct: 68 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 127
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP-----YYMA 252
+HRDL N L + +++K DFGL+ P ++ V P ++ A
Sbjct: 128 LGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYA 183
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGV 280
PE L + + DVWS GV++Y L +
Sbjct: 184 PESLTESKFSVASDVWSFGVVLYELFTYI 212
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 85 FGKELGRGEFGITHQC----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
F ++LG+G FG C + TGE A KK+ TE + D RE+EI++ L +
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKSL-Q 87
Query: 141 HPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKV 197
H NIV YK + + L+ME G L D + +K I + ++
Sbjct: 88 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 147
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP-----YYMA 252
+HRDL N L + +++K DFGL+ P ++ V P ++ A
Sbjct: 148 LGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYA 203
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGV 280
PE L + + DVWS GV++Y L +
Sbjct: 204 PESLTESKFSVASDVWSFGVVLYELFTYI 232
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 16/207 (7%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
T +LG G++G ++ + T A K + ++ + ++++ +E +M+ + KHPN
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 75
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
+V + Y++ E G L D R N+ + + I ++ +
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 135
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
+HRDL N L EN +K DFGLS G+ + G+ + + APE L
Sbjct: 136 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 191
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
N + + DVW+ GV+++ I G+ P+
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
AD L ++Q+ K+ F + D D +G +T EEL + + Q ++ +++ ++ D DGN
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 438 GLLSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
G + DEF++ M+ +K ++ L +AF+ FDK+Q+G+I
Sbjct: 61 GTIEFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYI 100
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 23/153 (15%)
Query: 302 FERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIK 361
F++D ++ E V LD NP EE L++ V GN T
Sbjct: 19 FDKDGDGCITVEELATVIRSLDQNPT-----EEELQDMI-------SEVDADGNGTIEFD 66
Query: 362 QF-SIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKV 420
+F S+M K K D ++K+ F + D D+NG ++ EL+ + +G+K+
Sbjct: 67 EFLSLMAKKVKDT----------DAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKL 116
Query: 421 SDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLK 453
+D +V+ +++ AD+DG+G ++ +EFV M + ++
Sbjct: 117 TDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVR 149
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 16/207 (7%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
T +LG G++G ++ + T A K + ++ + ++++ +E +M+ + KHPN
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 70
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
+V + Y++ E G L D R N+ + + I ++ +
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
+HRDL N L EN +K DFGLS G+ + G+ + + APE L
Sbjct: 131 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 186
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
N + + DVW+ GV+++ I G+ P+
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 16/207 (7%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
T +LG G++G ++ + T A K + ++ + ++++ +E +M+ + KHPN
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 75
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
+V + Y+++E G L D R N+ + I ++ +
Sbjct: 76 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
+HRDL N L EN +K DFGLS G+ + G+ + + APE L
Sbjct: 136 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 191
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
N + + DVW+ GV+++ I G+ P+
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 85 FGKELGRGEFGITHQC----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
F ++LG+G FG C + TGE A KK+ TE + D RE+EI++ L +
Sbjct: 17 FLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKSL-Q 72
Query: 141 HPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKV 197
H NIV YK + + L+ME G L + + +K I + ++
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEY 132
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP-----YYMA 252
+HRDL N L + +++K DFGL+ P ++ V P ++ A
Sbjct: 133 LGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYA 188
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGV 280
PE L + + DVWS GV++Y L +
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYELFTYI 217
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 16/207 (7%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
T +LG G++G ++ + T A K + ++ + ++++ +E +M+ + KHPN
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 70
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
+V + Y++ E G L D R N+ + + I ++ +
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
+HRDL N L EN +K DFGLS G+ + G+ + + APE L
Sbjct: 131 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 186
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
N + + DVW+ GV+++ I G+ P+
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DGNG +
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 441 SCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
EF+TM +K +++ + +AFR FDK+ +G+I
Sbjct: 61 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 97
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 350 VSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEEL 409
V GN T +F M K K D +I++ F + D D NG ++ EL
Sbjct: 52 VDADGNGTIDFPEFLTMMARKMK---------DTDSEEEIREAFRVFDKDGNGYISAAEL 102
Query: 410 KDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTM 448
+ + +G+K++D +V ++ AD+DG+G ++ +EFV M
Sbjct: 103 RHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 141
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DGNG +
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 441 SCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
EF+TM +K +++ + +AFR FDK+ +G+I
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 98
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
D +I++ F + D D NG ++ EL+ + +G+K++D +V ++ AD+DG+G ++ +
Sbjct: 78 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 137
Query: 444 EFVTM 448
EFV M
Sbjct: 138 EFVQM 142
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 85 FGKELGRGEFGITHQC----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
F ++LG+G FG C + TGE A KK+ TE + D RE+EI++ L +
Sbjct: 15 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKSL-Q 70
Query: 141 HPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKV 197
H NIV YK + + L+ME G L D + +K I + ++
Sbjct: 71 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 130
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVG---SP-YYMAP 253
+HR+L N L + +++K DFGL+ +++ ++ SP ++ AP
Sbjct: 131 LGTKRYIHRNLATRNILVEN---ENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAP 187
Query: 254 EVLRRN-YGPEIDVWSAGVIIYILLCGV 280
E L + + DVWS GV++Y L +
Sbjct: 188 ESLTESKFSVASDVWSFGVVLYELFTYI 215
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 93/225 (41%), Gaps = 33/225 (14%)
Query: 85 FGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD---VRREVEIMRHLPKH 141
FGK LG G FG + G+ A K+A + LK+ D+ + E++IM HL +H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTER-AAAAVGKTILRIVKVCH- 199
NIV A + ++ E C G+L + + K E A A+ + + H
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHF 169
Query: 200 ------------ENGVMHRDLKPENFLFADGSENSQLKAIDFGL-------SIFFKPGEQ 240
+HRD+ N L +G K DFGL S + G
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA---KIGDFGLARDIMNDSNYIVKGNA 226
Query: 241 FCEIVGSPYYMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
+ +MAPE + Y + DVWS G++++ I G+ P+
Sbjct: 227 RLPVK----WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
T +LG G++G ++ + T A K + ++ + ++++ +E +M+ + KHPN
Sbjct: 17 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 71
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
+V + Y++ E G L D R N+ + I ++ +
Sbjct: 72 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 131
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
+HRDL N L EN +K DFGLS G+ + G+ + + APE L
Sbjct: 132 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPESLAY 187
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
N + + DVW+ GV+++ I G+ P+
Sbjct: 188 NKFSIKSDVWAFGVLLWEIATYGMSPY 214
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DGNG +
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 441 SCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
EF+TM +K +++ + +AFR FDK+ +G+I
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 98
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
D +I++ F + D D NG ++ EL+ + +G+K++D +V ++ AD+DG+G ++ +
Sbjct: 78 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 137
Query: 444 EFVTM 448
EFV M
Sbjct: 138 EFVQM 142
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 95/207 (45%), Gaps = 16/207 (7%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
T +LG G++G ++ + T A K + ++ + ++++ +E +M+ + KHPN
Sbjct: 223 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 277
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
+V + Y++ E G L D R N+ + + I ++ +
Sbjct: 278 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 337
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
+HR+L N L EN +K DFGLS G+ + G+ + + APE L
Sbjct: 338 NFIHRNLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 393
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
N + + DVW+ GV+++ I G+ P+
Sbjct: 394 NKFSIKSDVWAFGVLLWEIATYGMSPY 420
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
T +LG G++G ++ + T A K + ++ + ++++ +E +M+ + KHPN
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 75
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
+V + Y++ E G L D R N+ + I ++ +
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
+HRDL N L EN +K DFGLS G+ + G+ + + APE L
Sbjct: 136 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 191
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
N + + DVW+ GV+++ I G+ P+
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
T +LG G++G ++ + T A K + ++ + ++++ +E +M+ + KHPN
Sbjct: 18 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 72
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
+V + Y++ E G L D R N+ + I ++ +
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 132
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
+HRDL N L EN +K DFGLS G+ + G+ + + APE L
Sbjct: 133 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPESLAY 188
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
N + + DVW+ GV+++ I G+ P+
Sbjct: 189 NKFSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 114/260 (43%), Gaps = 21/260 (8%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
T +LG G+FG ++ + T A K + ++ + ++++ +E +M+ + KHPN
Sbjct: 14 TMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 68
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
+V + Y++ E G L D R N+ + + I ++ +
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
+HRDL N L EN +K DFGLS G+ G+ + + APE L
Sbjct: 129 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAY 184
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE-AK 315
N + + DVW+ GV+++ I G+ P+ + + ++ ER P+ E
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMSPY-PGIDPSQVYELLEKDYRMER---PEGCPEKVY 240
Query: 316 ELVKNMLDPNPYNRLTLEEV 335
EL++ NP +R + E+
Sbjct: 241 ELMRACWQWNPSDRPSFAEI 260
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDG 436
++ NL ++Q+A+ K+ F + D D +G ++ EL + +G S+ +V LM DVDG
Sbjct: 1 MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDG 60
Query: 437 NGLLSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
N + EF+ MS LK ++ L +AF+ FDKN G I
Sbjct: 61 NHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLI 101
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDV-KMLMEAADVDGNGLLSC 442
D ++ + F + D + +G ++ ELK L IG+K++D +V +ML E + DG+G ++
Sbjct: 81 DSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVS--DGSGEINI 138
Query: 443 DEFVTM 448
+F +
Sbjct: 139 KQFAAL 144
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 83/200 (41%), Gaps = 26/200 (13%)
Query: 141 HPNIVTYKEAYEDKD-----AIYLVMELCEGGELFDRIVNKGHYTERA-AAAVGKTILRI 194
HP+IV E D Y+VME GG+ R +KG A A A IL
Sbjct: 138 HPSIVQIFNFVEHTDRHGDPVGYIVMEYV-GGQSLKR--SKGQKLPVAEAIAYLLEILPA 194
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
+ H G+++ DLKPEN + + QLK ID G F + G+P + APE
Sbjct: 195 LSYLHSIGLVYNDLKPENIMLTE----EQLKLIDLGAVSRIN---SFGYLYGTPGFQAPE 247
Query: 255 VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
++R D+++ G + L +P +G+ E DP K
Sbjct: 248 IVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDGLP----------EDDPVLKTYDSY 297
Query: 315 KELVKNMLDPNPYNRLTLEE 334
L++ +DP+P R T E
Sbjct: 298 GRLLRRAIDPDPRQRFTTAE 317
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
T +LG G++G ++ + T A K + ++ + ++++ +E +M+ + KHPN
Sbjct: 18 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 72
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
+V + Y++ E G L D R N+ + I ++ +
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 132
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
+HRDL N L EN +K DFGLS G+ + G+ + + APE L
Sbjct: 133 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 188
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
N + + DVW+ GV+++ I G+ P+
Sbjct: 189 NKFSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
T +LG G++G ++ + T A K + ++ + ++++ +E +M+ + KHPN
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 75
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
+V + Y++ E G L D R N+ + I ++ +
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
+HRDL N L EN +K DFGLS G+ + G+ + + APE L
Sbjct: 136 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 191
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
N + + DVW+ GV+++ I G+ P+
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
T +LG G++G ++ + T A K + ++ + ++++ +E +M+ + KHPN
Sbjct: 29 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 83
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
+V + Y++ E G L D R N+ + I ++ +
Sbjct: 84 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 143
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
+HRDL N L EN +K DFGLS G+ + G+ + + APE L
Sbjct: 144 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 199
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
N + + DVW+ GV+++ I G+ P+
Sbjct: 200 NKFSIKSDVWAFGVLLWEIATYGMSPY 226
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
T +LG G++G ++ + T A K + ++ + ++++ +E +M+ + KHPN
Sbjct: 18 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 72
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
+V + Y++ E G L D R N+ + I ++ +
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 132
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
+HRDL N L EN +K DFGLS G+ + G+ + + APE L
Sbjct: 133 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 188
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
N + + DVW+ GV+++ I G+ P+
Sbjct: 189 NKFSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
T +LG G++G ++ + T A K + ++ + ++++ +E +M+ + KHPN
Sbjct: 20 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 74
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
+V + Y++ E G L D R N+ + I ++ +
Sbjct: 75 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 134
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
+HRDL N L EN +K DFGLS G+ + G+ + + APE L
Sbjct: 135 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 190
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
N + + DVW+ GV+++ I G+ P+
Sbjct: 191 NKFSIKSDVWAFGVLLWEIATYGMSPY 217
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 122/281 (43%), Gaps = 47/281 (16%)
Query: 88 ELGRGEFGITHQCFEIETGETYACKKI-----AKEKLKTEIDIDDVRREVEIMRHLPKHP 142
E+GRG +G ++ +G+ A K+I KE+ + +D+D V R + P
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDC-------P 81
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA---VGKTILRIVKVCH 199
IV + A + ++ MEL FD+ + +GK L VK +
Sbjct: 82 YIVQFYGALFREGDCWICMELMSTS--FDKFYKYVYSVLDDVIPEEILGKITLATVKALN 139
Query: 200 ---EN-GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV 255
EN ++HRD+KP N L D S N +K DFG+S G YMAPE
Sbjct: 140 HLKENLKIIHRDIKPSNILL-DRSGN--IKLCDFGISGQLVDSIAKTRDAGCRPYMAPER 196
Query: 256 L-----RRNYGPEIDVWSAGVIIYILLCGVPPF--WAETEEGIAHAIIRGKIDFERDPWP 308
+ R+ Y DVWS G+ +Y L G P+ W + + +++G DP P
Sbjct: 197 IDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQ-VVKG------DP-P 248
Query: 309 KVS-KEAKE-------LVKNMLDPNPYNRLTLEEVLENPWI 341
++S E +E V L + R +E+L++P+I
Sbjct: 249 QLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 115/260 (44%), Gaps = 21/260 (8%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
T +LG G++G ++ + T A K + ++ + ++++ +E +M+ + KHPN
Sbjct: 14 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 68
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
+V + Y+++E G L D R N+ + + I ++ +
Sbjct: 69 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
+HRDL N L EN +K DFGLS G+ G+ + + APE L
Sbjct: 129 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAY 184
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE-AK 315
N + + DVW+ GV+++ I G+ P+ + + ++ ER P+ E
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMSPY-PGIDPSQVYELLEKDYRMER---PEGCPEKVY 240
Query: 316 ELVKNMLDPNPYNRLTLEEV 335
EL++ NP +R + E+
Sbjct: 241 ELMRACWQWNPSDRPSFAEI 260
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
T +LG G++G ++ + T A K + ++ + ++++ +E +M+ + KHPN
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 70
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
+V + Y++ E G L D R N+ + I ++ +
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 130
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
+HRDL N L EN +K DFGLS G+ + G+ + + APE L
Sbjct: 131 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 186
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
N + + DVW+ GV+++ I G+ P+
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
T +LG G++G + + T A K + ++ + ++++ +E +M+ + KHPN
Sbjct: 35 TMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 89
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
+V + Y+V E G L D R N+ T + I ++ +
Sbjct: 90 LVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKK 149
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
+HRDL N L EN +K DFGLS G+ + G+ + + APE L
Sbjct: 150 NFIHRDLAARNCLVG---ENHVVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 205
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
N + + DVW+ GV+++ I G+ P+
Sbjct: 206 NTFSIKSDVWAFGVLLWEIATYGMSPY 232
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
T +LG G++G ++ + T A K + ++ + ++++ +E +M+ + KHPN
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 70
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
+V + Y++ E G L D R N+ + I ++ +
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 130
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
+HRDL N L EN +K DFGLS G+ + G+ + + APE L
Sbjct: 131 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 186
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
N + + DVW+ GV+++ I G+ P+
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
T +LG G++G ++ + T A K + ++ + ++++ +E +M+ + KHPN
Sbjct: 220 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 274
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
+V + Y++ E G L D R N+ + I ++ +
Sbjct: 275 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 334
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
+HR+L N L EN +K DFGLS G+ + G+ + + APE L
Sbjct: 335 NFIHRNLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 390
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
N + + DVW+ GV+++ I G+ P+
Sbjct: 391 NKFSIKSDVWAFGVLLWEIATYGMSPY 417
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
L +Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DGNG +
Sbjct: 1 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 441 SCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
EF+ M+ +K +++ L +AFR FDK+ +GFI
Sbjct: 61 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFI 97
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 41/63 (65%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
D ++K+ F + D D NG ++ EL+ + +G+K++D +V ++ ADVDG+G ++ +
Sbjct: 77 DSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYE 136
Query: 444 EFV 446
EFV
Sbjct: 137 EFV 139
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
T +LG G++G ++ + T A K + ++ + ++++ +E +M+ + KHPN
Sbjct: 262 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 316
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
+V + Y++ E G L D R N+ + I ++ +
Sbjct: 317 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 376
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
+HR+L N L EN +K DFGLS G+ + G+ + + APE L
Sbjct: 377 NFIHRNLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 432
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
N + + DVW+ GV+++ I G+ P+
Sbjct: 433 NKFSIKSDVWAFGVLLWEIATYGMSPY 459
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
Query: 383 QDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSC 442
++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DGNG +
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 63
Query: 443 DEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
EF+TM +K +++ + +AFR FDK+ +G+I
Sbjct: 64 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 98
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 350 VSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEEL 409
V GN T +F M K K D +I++ F + D D NG ++ EL
Sbjct: 53 VDADGNGTIDFPEFLTMMARKMK---------DTDSEEEIREAFRVFDKDGNGYISAAEL 103
Query: 410 KDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTM 448
+ + +G+K++D +V ++ AD+DG+G ++ +EFV M
Sbjct: 104 RHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 142
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 57/94 (60%)
Query: 383 QDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSC 442
++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DGNG +
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 61
Query: 443 DEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
EF+TM + + + + +AFR FDK+ +G+I
Sbjct: 62 PEFLTMMARKMKDTDSEEIREAFRVFDKDGNGYI 95
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 47/77 (61%)
Query: 372 KVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEA 431
+ L ++A + +I++ F + D D NG ++ EL+ + +G+K++D +V ++
Sbjct: 63 EFLTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 122
Query: 432 ADVDGNGLLSCDEFVTM 448
A++DG+G ++ +EFV M
Sbjct: 123 ANIDGDGQVNYEEFVQM 139
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 9/106 (8%)
Query: 364 SIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDP 423
+I K V+R + N + A+++ M +D D NG + F E L M+ +K+ D
Sbjct: 22 TITTKELGTVMRSLGQNPTE---AELQDMINEVDADGNGTIDFPEF---LTMMARKMKDT 75
Query: 424 DVKMLMEAA---DVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFR 466
D + + EA D DGNG +S E + +L D+ + + R
Sbjct: 76 DSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 121
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 94/212 (44%), Gaps = 43/212 (20%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR----REVEIMRHLP 139
G+++GRG FG E+ +G A + K E D++ +E I++
Sbjct: 117 VLGEQIGRGNFG------EVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY- 169
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV---- 195
HPNIV K IY+VMEL +GG+ + +G A KT+L++V
Sbjct: 170 SHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG------ARLRVKTLLQMVGDAA 223
Query: 196 ---KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS------IFFKPGEQFCEIVG 246
+ +HRDL N L +E + LK DFG+S ++ G +
Sbjct: 224 AGMEYLESKCCIHRDLAARNCLV---TEKNVLKISDFGMSREEADGVYAASG----GLRQ 276
Query: 247 SPY-YMAPEVLRRNYG---PEIDVWSAGVIIY 274
P + APE L NYG E DVWS G++++
Sbjct: 277 VPVKWTAPEAL--NYGRYSSESDVWSFGILLW 306
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 106/255 (41%), Gaps = 47/255 (18%)
Query: 128 VRREVEIMRHLPKHPNIVTYKEAYEDKD-----AIYLVMELCE---GGELFD-RIVNKGH 178
V RE+ ++ H HPNI+ ++ + + +YLV EL + D RIV
Sbjct: 76 VLREIRLLNHF-HHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQ 134
Query: 179 YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG 238
+ + IL + V HE GV+HRDL P N L AD N+ + DF L+
Sbjct: 135 HIQ----YFMYHILLGLHVLHEAGVVHRDLHPGNILLAD---NNDITICDFNLAREDTAD 187
Query: 239 EQFCEIVGSPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLCGVPPFWAET----EEGIA 292
V +Y APE++ + + +D+WSAG ++ + F T I
Sbjct: 188 ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIV 247
Query: 293 HAIIRGKI------------DFERD--------PW----PKVSKEAKELVKNMLDPNPYN 328
+ KI D+ R+ W P A +L+ ML+ NP
Sbjct: 248 EVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQR 307
Query: 329 RLTLEEVLENPWIKN 343
R++ E+ L +P+ ++
Sbjct: 308 RISTEQALRHPYFES 322
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 106/255 (41%), Gaps = 47/255 (18%)
Query: 128 VRREVEIMRHLPKHPNIVTYKEAYEDKD-----AIYLVMELCE---GGELFD-RIVNKGH 178
V RE+ ++ H HPNI+ ++ + + +YLV EL + D RIV
Sbjct: 76 VLREIRLLNHF-HHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQ 134
Query: 179 YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG 238
+ + IL + V HE GV+HRDL P N L AD N+ + DF L+
Sbjct: 135 HIQ----YFMYHILLGLHVLHEAGVVHRDLHPGNILLAD---NNDITICDFNLAREDTAD 187
Query: 239 EQFCEIVGSPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLCGVPPFWAET----EEGIA 292
V +Y APE++ + + +D+WSAG ++ + F T I
Sbjct: 188 ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIV 247
Query: 293 HAIIRGKI------------DFERD--------PW----PKVSKEAKELVKNMLDPNPYN 328
+ KI D+ R+ W P A +L+ ML+ NP
Sbjct: 248 EVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQR 307
Query: 329 RLTLEEVLENPWIKN 343
R++ E+ L +P+ ++
Sbjct: 308 RISTEQALRHPYFES 322
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
T +LG G++G ++ + T A K + ++ + ++++ +E +M+ + KHPN
Sbjct: 17 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 71
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
+V + Y+++E G L D R N+ + I ++ +
Sbjct: 72 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 131
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
+HRDL N L EN +K DFGLS G+ G+ + + APE L
Sbjct: 132 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAY 187
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
N + + DVW+ GV+++ I G+ P+
Sbjct: 188 NKFSIKSDVWAFGVLLWEIATYGMSPY 214
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 35/208 (16%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR----REVEIMRHLP 139
G+++GRG FG E+ +G A + K E D++ +E I++
Sbjct: 117 VLGEQIGRGNFG------EVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY- 169
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV---- 195
HPNIV K IY+VMEL +GG+ + +G A KT+L++V
Sbjct: 170 SHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG------ARLRVKTLLQMVGDAA 223
Query: 196 ---KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE--IVGSPY- 249
+ +HRDL N L +E + LK DFG+S G + P
Sbjct: 224 AGMEYLESKCCIHRDLAARNCLV---TEKNVLKISDFGMSREEADGVXAASGGLRQVPVK 280
Query: 250 YMAPEVLRRNYG---PEIDVWSAGVIIY 274
+ APE L NYG E DVWS G++++
Sbjct: 281 WTAPEAL--NYGRYSSESDVWSFGILLW 306
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
Query: 383 QDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSC 442
++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DGNG +
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 61
Query: 443 DEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
EF+TM +K +++ + +AFR FDK+ +G+I
Sbjct: 62 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 96
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
D +I++ F + D D NG ++ EL+ + +G+K++D +V ++ AD+DG+G ++ +
Sbjct: 76 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 135
Query: 444 EFVTM 448
EFV M
Sbjct: 136 EFVQM 140
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 59.7 bits (143), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
AD L ++Q+A+ K+ F + D D +G +T +EL +GQ ++ +++ + D DGN
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGN 61
Query: 438 GLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
G + EF+T K +++ + +AFR FDK+ +G+I
Sbjct: 62 GTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYI 101
Score = 44.7 bits (104), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 39/63 (61%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
D +I++ F + D D NG ++ EL+ +G+K++D +V + AD+DG+G ++ +
Sbjct: 81 DSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVNYE 140
Query: 444 EFV 446
EFV
Sbjct: 141 EFV 143
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 59.7 bits (143), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
AD L ++Q+A+ K+ F + D D +G +T +EL +GQ ++ +++ + D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGN 60
Query: 438 GLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
G + EF+T K +++ + +AFR FDK+ +G+I
Sbjct: 61 GTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYI 100
Score = 43.9 bits (102), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 39/63 (61%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
D +I++ F + D D NG ++ EL+ +G+K++D +V + AD+DG+G ++ +
Sbjct: 80 DSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYE 139
Query: 444 EFV 446
EFV
Sbjct: 140 EFV 142
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 107/238 (44%), Gaps = 23/238 (9%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR----REVEIMR 136
++ G+ +G G+FG HQ + I K T D VR +E MR
Sbjct: 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS---DSVREKFLQEALTMR 71
Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
HP+IV + + ++++MELC GEL + + + + A+ + L
Sbjct: 72 QF-DHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 129
Query: 197 VCHENG-VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS-PY-YMAP 253
E+ +HRD+ N L S N +K DFGLS + + + G P +MAP
Sbjct: 130 AYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 186
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKID-FERDPWP 308
E + R + DVW GV ++ IL+ GV PF +G+ + + G+I+ ER P P
Sbjct: 187 ESINFRRFTSASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERLPMP 239
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 107/238 (44%), Gaps = 23/238 (9%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR----REVEIMR 136
++ G+ +G G+FG HQ + I K T D VR +E MR
Sbjct: 38 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS---DSVREKFLQEALTMR 94
Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
HP+IV + + ++++MELC GEL + + + + A+ + L
Sbjct: 95 QF-DHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 152
Query: 197 VCHENG-VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS-PY-YMAP 253
E+ +HRD+ N L S N +K DFGLS + + + G P +MAP
Sbjct: 153 AYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 209
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKID-FERDPWP 308
E + R + DVW GV ++ IL+ GV PF +G+ + + G+I+ ER P P
Sbjct: 210 ESINFRRFTSASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERLPMP 262
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 107/248 (43%), Gaps = 26/248 (10%)
Query: 89 LGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRHLPKHPNIV 145
+G GEFG + G+ +C +A + LK TE + E IM +HPNI+
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESC--VAIKTLKGGYTERQRREFLSEASIMGQF-EHPNII 78
Query: 146 TYKEAYEDKDAIYLVMELCEGGEL--FDRIVNKGHYTERAAAAVGKTILRIVKVCHENGV 203
+ + + ++ E E G L F R+ N G +T + + I ++ E
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRL-NDGQFTVIQLVGMLRGIASGMRYLAEMSY 137
Query: 204 MHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPY---YMAPEVLR 257
+HRDL N L + N K DFGLS F + + +G + APE +
Sbjct: 138 VHRDLAARNILV---NSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIA 194
Query: 258 -RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK 315
R + D WS G++++ ++ G P+W + + + +AI + D+ P P
Sbjct: 195 FRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAI---EQDYRLPPPPDCPTSLH 251
Query: 316 ELVKNMLD 323
+L MLD
Sbjct: 252 QL---MLD 256
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 107/248 (43%), Gaps = 26/248 (10%)
Query: 89 LGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRHLPKHPNIV 145
+G GEFG + G+ +C +A + LK TE + E IM +HPNI+
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESC--VAIKTLKGGYTERQRREFLSEASIMGQF-EHPNII 80
Query: 146 TYKEAYEDKDAIYLVMELCEGGEL--FDRIVNKGHYTERAAAAVGKTILRIVKVCHENGV 203
+ + + ++ E E G L F R+ N G +T + + I ++ E
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLRL-NDGQFTVIQLVGMLRGIASGMRYLAEMSY 139
Query: 204 MHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-----PGEQFCEIVGSPY-YMAPEVLR 257
+HRDL N L + N K DFGLS F + P E P + APE +
Sbjct: 140 VHRDLAARNILV---NSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIA 196
Query: 258 -RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK 315
R + D WS G++++ ++ G P+W + + + +AI + D+ P P
Sbjct: 197 FRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAI---EQDYRLPPPPDCPTSLH 253
Query: 316 ELVKNMLD 323
+L MLD
Sbjct: 254 QL---MLD 258
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 107/238 (44%), Gaps = 23/238 (9%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR----REVEIMR 136
++ G+ +G G+FG HQ + I K T D VR +E MR
Sbjct: 13 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS---DSVREKFLQEALTMR 69
Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
HP+IV + + ++++MELC GEL + + + + A+ + L
Sbjct: 70 QF-DHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 127
Query: 197 VCHENG-VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS-PY-YMAP 253
E+ +HRD+ N L S N +K DFGLS + + + G P +MAP
Sbjct: 128 AYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 184
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKID-FERDPWP 308
E + R + DVW GV ++ IL+ GV PF +G+ + + G+I+ ER P P
Sbjct: 185 ESINFRRFTSASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERLPMP 237
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 114/277 (41%), Gaps = 49/277 (17%)
Query: 89 LGRGEFGITHQCFEIETGETYACKK----IAKEKLK---TEIDIDDVRREVEIMRHLPKH 141
+G GEFG E+ +G K +A + LK TE D E IM H
Sbjct: 41 IGAGEFG------EVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQF-DH 93
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGEL--FDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
PN++ + + ++ E E G L F R N G +T + + I +K
Sbjct: 94 PNVIHLEGVVTKSTPVMIITEFMENGSLDSFLR-QNDGQFTVIQLVGMLRGIAAGMKYLA 152
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK---PGEQFCEIVGSPY---YMAP 253
+ +HRDL N L + N K DFGLS F + + +G + AP
Sbjct: 153 DMNYVHRDLAARNILV---NSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP 209
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS 311
E ++ R + DVWS G++++ ++ G P+W T + + +AI + D+ R P P
Sbjct: 210 EAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI---EQDY-RLPPPMDC 265
Query: 312 KEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAP 348
A L +++ + W K+ NH P
Sbjct: 266 PSA-----------------LHQLMLDCWQKDRNHRP 285
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 107/238 (44%), Gaps = 23/238 (9%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR----REVEIMR 136
++ G+ +G G+FG HQ + I K T D VR +E MR
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTS---DSVREKFLQEALTMR 66
Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
HP+IV + + ++++MELC GEL + + + + A+ + L
Sbjct: 67 QF-DHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 124
Query: 197 VCHENG-VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS-PY-YMAP 253
E+ +HRD+ N L S N +K DFGLS + + + G P +MAP
Sbjct: 125 AYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 181
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKID-FERDPWP 308
E + R + DVW GV ++ IL+ GV PF +G+ + + G+I+ ER P P
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERLPMP 234
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 107/238 (44%), Gaps = 23/238 (9%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR----REVEIMR 136
++ G+ +G G+FG HQ + I K T D VR +E MR
Sbjct: 12 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS---DSVREKFLQEALTMR 68
Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
HP+IV + + ++++MELC GEL + + + + A+ + L
Sbjct: 69 QF-DHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 126
Query: 197 VCHENG-VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS-PY-YMAP 253
E+ +HRD+ N L S N +K DFGLS + + + G P +MAP
Sbjct: 127 AYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 183
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKID-FERDPWP 308
E + R + DVW GV ++ IL+ GV PF +G+ + + G+I+ ER P P
Sbjct: 184 ESINFRRFTSASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERLPMP 236
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 107/238 (44%), Gaps = 23/238 (9%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR----REVEIMR 136
++ G+ +G G+FG HQ + I K T D VR +E MR
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS---DSVREKFLQEALTMR 66
Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
HP+IV + + ++++MELC GEL + + + + A+ + L
Sbjct: 67 QF-DHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 124
Query: 197 VCHENG-VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS-PY-YMAP 253
E+ +HRD+ N L S N +K DFGLS + + + G P +MAP
Sbjct: 125 AYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 181
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKID-FERDPWP 308
E + R + DVW GV ++ IL+ GV PF +G+ + + G+I+ ER P P
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERLPMP 234
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 93/207 (44%), Gaps = 16/207 (7%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
T +LG G++G ++ + T A K + ++ + ++++ +E +M+ + KHPN
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 75
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
+V + Y++ E G L D R N+ + I ++ +
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
+HRDL N L EN +K DFGLS G+ G+ + + APE L
Sbjct: 136 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAY 191
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
N + + DVW+ GV+++ I G+ P+
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 107/238 (44%), Gaps = 23/238 (9%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR----REVEIMR 136
++ G+ +G G+FG HQ + I K T D VR +E MR
Sbjct: 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS---DSVREKFLQEALTMR 63
Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
HP+IV + + ++++MELC GEL + + + + A+ + L
Sbjct: 64 QF-DHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 121
Query: 197 VCHENG-VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS-PY-YMAP 253
E+ +HRD+ N L S N +K DFGLS + + + G P +MAP
Sbjct: 122 AYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 178
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKID-FERDPWP 308
E + R + DVW GV ++ IL+ GV PF +G+ + + G+I+ ER P P
Sbjct: 179 ESINFRRFTSASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERLPMP 231
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
DQ+++ K+ F + D+++ G +T E L+ L G +V + AD GNG +
Sbjct: 3 DQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFP 62
Query: 444 EFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
EF++ M +K+ ++DIL QAFR FD +G+I
Sbjct: 63 EFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYI 96
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 119/279 (42%), Gaps = 38/279 (13%)
Query: 87 KELGRGEFGITHQC-FEIE---TGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
++LG G FG C ++ E TGE A K + E I D+++E+EI+R+L H
Sbjct: 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIA--DLKKEIEILRNL-YHE 83
Query: 143 NIVTYKE-AYED-KDAIYLVMELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKVCH 199
NIV YK ED + I L+ME G L + + NK + I + +
Sbjct: 84 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG 143
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI---VGSP-YYMAPEV 255
+HRDL N L Q+K DFGL+ + ++ + SP ++ APE
Sbjct: 144 SRQYVHRDLAARNVLV---ESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPEC 200
Query: 256 LRRN-YGPEIDVWSAGVIIYILLCGV---------------PPFWAETEEGIAHAIIRGK 299
L ++ + DVWS GV ++ LL P T + + + GK
Sbjct: 201 LMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGK 260
Query: 300 IDFERDPW-PKVSKEAKELVKNMLDPNPYNRLTLEEVLE 337
R P P E +L++ + P NR + + ++E
Sbjct: 261 ----RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 295
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 119/279 (42%), Gaps = 38/279 (13%)
Query: 87 KELGRGEFGITHQC-FEIE---TGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
++LG G FG C ++ E TGE A K + E I D+++E+EI+R+L H
Sbjct: 15 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIA--DLKKEIEILRNL-YHE 71
Query: 143 NIVTYKE-AYED-KDAIYLVMELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKVCH 199
NIV YK ED + I L+ME G L + + NK + I + +
Sbjct: 72 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG 131
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI---VGSP-YYMAPEV 255
+HRDL N L Q+K DFGL+ + ++ + SP ++ APE
Sbjct: 132 SRQYVHRDLAARNVLV---ESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPEC 188
Query: 256 LRRN-YGPEIDVWSAGVIIYILLCGV---------------PPFWAETEEGIAHAIIRGK 299
L ++ + DVWS GV ++ LL P T + + + GK
Sbjct: 189 LMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGK 248
Query: 300 IDFERDPW-PKVSKEAKELVKNMLDPNPYNRLTLEEVLE 337
R P P E +L++ + P NR + + ++E
Sbjct: 249 ----RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 283
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
L ++ +A+ K F M D D GD++ +EL + M+GQ + ++ ++E D DG+G +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 441 SCDEFVTMSV-HLKRIG---NDDILSQAFRFFDKNQSGFI 476
+EF+ M V +K +++ L+ FR FDKN GFI
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFI 113
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 302 FERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIK 361
F+ D +S + V ML NP T EE+ D V G+ T +
Sbjct: 29 FDADGGGDISTKELGTVMRMLGQNP----TKEEL--------DAIIEEVDEDGSGTIDFE 76
Query: 362 QFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVS 421
+F +M ++R + ++ ++ F + D + +G + EEL + L G+ V
Sbjct: 77 EFLVM------MVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVI 130
Query: 422 DPDVKMLMEAADVDGNGLLSCDEFVTM 448
+ D++ LM+ +D + +G + DEF+ M
Sbjct: 131 EEDIEDLMKDSDKNNDGRIDFDEFLKM 157
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 58/100 (58%), Gaps = 4/100 (4%)
Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
L ++ +A+ K F M D D GD++ +EL + M+GQ + ++ ++E D DG+G +
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 70
Query: 441 SCDEFVTMSV-HLKRIG---NDDILSQAFRFFDKNQSGFI 476
+EF+ M V +K +++ L++ FR FD+N G+I
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYI 110
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 302 FERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIK 361
F+ D +S + V ML P T EE+ D V G+ T +
Sbjct: 26 FDADGGGDISVKELGTVMRMLGQTP----TKEEL--------DAIIEEVDEDGSGTIDFE 73
Query: 362 QFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVS 421
+F +M ++R + ++ ++ + F + D + +G + EEL + G+ V+
Sbjct: 74 EFLVM------MVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVT 127
Query: 422 DPDVKMLMEAADVDGNGLLSCDEFVTM 448
D +++ LM+ D + +G + DEF+ M
Sbjct: 128 DEEIESLMKDGDKNNDGRIDFDEFLKM 154
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
L ++ +A+ K F M D D GD++ +EL + M+GQ + ++ ++E D DG+G +
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 70
Query: 441 SCDEFVTMSV-HLKRIG---NDDILSQAFRFFDKNQSGFI 476
+EF+ M V +K +++ L+ FR FDKN GFI
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFI 110
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 18/147 (12%)
Query: 302 FERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIK 361
F+ D +S + V ML NP T EE+ D V G+ T +
Sbjct: 26 FDADGGGDISTKELGTVMRMLGQNP----TKEEL--------DAIIEEVDEDGSGTIDFE 73
Query: 362 QFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVS 421
+F +M ++R + ++ ++ F + D + +G + EEL + L G+ V+
Sbjct: 74 EFLVM------MVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVT 127
Query: 422 DPDVKMLMEAADVDGNGLLSCDEFVTM 448
+ D++ LM+ +D + +G + DEF+ M
Sbjct: 128 EEDIEDLMKDSDKNNDGRIDFDEFLKM 154
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
L ++ +A+ K F M D D GD++ +EL + M+GQ + ++ ++E D DG+G +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 441 SCDEFVTMSV-HLKRIG---NDDILSQAFRFFDKNQSGFI 476
+EF+ M V +K +++ L+ FR FDKN GFI
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFI 113
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 18/147 (12%)
Query: 302 FERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIK 361
F+ D +S + V ML NP T EE+ D V G+ T +
Sbjct: 29 FDADGGGDISTKELGTVMRMLGQNP----TKEEL--------DAIIEEVDEDGSGTIDFE 76
Query: 362 QFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVS 421
+F +M ++R + ++ ++ F + D + +G + EEL + L G+ V+
Sbjct: 77 EFLVM------MVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVT 130
Query: 422 DPDVKMLMEAADVDGNGLLSCDEFVTM 448
+ D++ LM+ +D + +G + DEF+ M
Sbjct: 131 EEDIEDLMKDSDKNNDGRIDFDEFLKM 157
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
L ++ +A+ K F M D D GD++ +EL + M+GQ + ++ ++E D DG+G +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 441 SCDEFVTMSV-HLKRIG---NDDILSQAFRFFDKNQSGFI 476
+EF+ M V +K +++ L+ FR FDKN GFI
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFI 113
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 18/147 (12%)
Query: 302 FERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIK 361
F+ D +S + V ML NP T EE+ D V G+ T +
Sbjct: 29 FDADGGGDISTKELGTVMRMLGQNP----TKEEL--------DAIIEEVDEDGSGTIDFE 76
Query: 362 QFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVS 421
+F +M ++R + ++ ++ F + D + +G + EEL + L G+ V+
Sbjct: 77 EFLVM------MVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVT 130
Query: 422 DPDVKMLMEAADVDGNGLLSCDEFVTM 448
+ D++ LM+ +D + +G + DEF+ M
Sbjct: 131 EEDIEDLMKDSDKNNDGRIDFDEFLKM 157
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 106/238 (44%), Gaps = 23/238 (9%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR----REVEIMR 136
++ G+ +G G+FG HQ + I K T D VR +E MR
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTS---DSVREKFLQEALTMR 446
Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
HP+IV + + ++++MELC GEL + + + A+ + L
Sbjct: 447 QF-DHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTAL 504
Query: 197 VCHENG-VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS-PY-YMAP 253
E+ +HRD+ N L S N +K DFGLS + + + G P +MAP
Sbjct: 505 AYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 561
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKID-FERDPWP 308
E + R + DVW GV ++ IL+ GV PF +G+ + + G+I+ ER P P
Sbjct: 562 ESINFRRFTSASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERLPMP 614
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
A+ L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DGN
Sbjct: 1 AEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 438 GLLSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
G + EF++ M+ +K +++ L +AF+ FD++ +G I
Sbjct: 61 GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLI 100
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 43/68 (63%)
Query: 383 QDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSC 442
QD ++ + F + D D NG ++ EL+ + +G+K++D +V ++ AD+DG+G ++
Sbjct: 79 QDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINY 138
Query: 443 DEFVTMSV 450
+EFV M V
Sbjct: 139 EEFVRMMV 146
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 10/117 (8%)
Query: 364 SIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDP 423
+I K V+R + N + A+++ M +D D NG + F E L+++ +K+ +
Sbjct: 26 TITTKELGTVMRSLGQNPTE---AELQDMINEVDADGNGTIDFPEF---LSLMARKMKEQ 79
Query: 424 DVKM-LMEAA---DVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
D + L+EA D DGNGL+S E + +L DD + + R D + G I
Sbjct: 80 DSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHI 136
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 99/254 (38%), Gaps = 52/254 (20%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y LG G FG +C + G++ KI + K + R E+ +++ + +
Sbjct: 51 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYR---EAARLEINVLKKIKE 107
Query: 141 HPNIVTYKEAYEDKDAIYLVM----------ELCEGGEL-------FDRIVNKGHYTERA 183
+DK+ +L + +C EL F + N Y
Sbjct: 108 -----------KDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPH 156
Query: 184 AAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGS----------------ENSQLKAI 227
+ + ++ HEN + H DLKPEN LF + +N+ ++
Sbjct: 157 VRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVA 216
Query: 228 DFGLSIFFKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVIIYILLCGVPPFWAE 286
DFG + F E IV + +Y PEV L + DVWS G I++ G F +
Sbjct: 217 DFGSATF--DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLF--Q 272
Query: 287 TEEGIAHAIIRGKI 300
T E H ++ KI
Sbjct: 273 THENREHLVMMEKI 286
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 99/254 (38%), Gaps = 52/254 (20%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y LG G FG +C + G++ KI + K + R E+ +++ + +
Sbjct: 28 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYR---EAARLEINVLKKIKE 84
Query: 141 HPNIVTYKEAYEDKDAIYLVM----------ELCEGGEL-------FDRIVNKGHYTERA 183
+DK+ +L + +C EL F + N Y
Sbjct: 85 -----------KDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPH 133
Query: 184 AAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGS----------------ENSQLKAI 227
+ + ++ HEN + H DLKPEN LF + +N+ ++
Sbjct: 134 VRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVA 193
Query: 228 DFGLSIFFKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVIIYILLCGVPPFWAE 286
DFG + F E IV + +Y PEV L + DVWS G I++ G F +
Sbjct: 194 DFGSATF--DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLF--Q 249
Query: 287 TEEGIAHAIIRGKI 300
T E H ++ KI
Sbjct: 250 THENREHLVMMEKI 263
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 58/100 (58%), Gaps = 4/100 (4%)
Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
L ++ +A+ K F M D D GD++ +EL + M+GQ + ++ ++E D DG+G +
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 70
Query: 441 SCDEFVTMSV-HLKRIG---NDDILSQAFRFFDKNQSGFI 476
+EF+ M V +K +++ L++ FR FD+N G+I
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYI 110
Score = 35.4 bits (80), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 348 PNVSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFE 407
V G+ T ++F +M ++R + ++ ++ ++F + D + +G + E
Sbjct: 60 EEVDEDGSGTIDFEEFLVM------MVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAE 113
Query: 408 ELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTM 448
EL + G+ V+D +++ LM+ D + +G + DEF+ M
Sbjct: 114 ELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKM 154
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
L ++ +A+ K F M D D GD++ +EL + M+GQ + ++ ++E D DG+G +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 441 SCDEFVTMSV-HLKRIG---NDDILSQAFRFFDKNQSGFI 476
+EF+ M V +K +++ L FR FDKN GFI
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFI 113
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 68/147 (46%), Gaps = 18/147 (12%)
Query: 302 FERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIK 361
F+ D +S + V ML NP T EE+ D V G+ T +
Sbjct: 29 FDADGGGDISTKELGTVMRMLGQNP----TKEEL--------DAIIEEVDEDGSGTIDFE 76
Query: 362 QFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVS 421
+F +M ++R + ++ +++ F + D + +G + EEL + L G+ V+
Sbjct: 77 EFLVM------MVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVT 130
Query: 422 DPDVKMLMEAADVDGNGLLSCDEFVTM 448
+ D++ LM+ +D + +G + DEF+ M
Sbjct: 131 EEDIEDLMKDSDKNNDGRIDFDEFLKM 157
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 94/229 (41%), Gaps = 45/229 (19%)
Query: 85 FGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD---VRREVEIMRHLPKH 141
FGK LG G FG + G+ A K+A + LK+ D+ + E++IM HL +H
Sbjct: 42 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 101
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKG------------------HYTERA 183
NIV A + ++ E C G+L + + K H++ +
Sbjct: 102 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 161
Query: 184 AAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL-------SIFFK 236
A + K C +HRD+ N L +G K DFGL S +
Sbjct: 162 AQGMA---FLASKNC-----IHRDVAARNVLLTNGHVA---KIGDFGLARDIMNDSNYIV 210
Query: 237 PGEQFCEIVGSPYYMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
G + +MAPE + Y + DVWS G++++ I G+ P+
Sbjct: 211 KGNARLPV----KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 255
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 99/254 (38%), Gaps = 52/254 (20%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y LG G FG +C + G++ KI + K + R E+ +++ + +
Sbjct: 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYR---EAARLEINVLKKIKE 75
Query: 141 HPNIVTYKEAYEDKDAIYLVM----------ELCEGGEL-------FDRIVNKGHYTERA 183
+DK+ +L + +C EL F + N Y
Sbjct: 76 -----------KDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPH 124
Query: 184 AAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGS----------------ENSQLKAI 227
+ + ++ HEN + H DLKPEN LF + +N+ ++
Sbjct: 125 VRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVA 184
Query: 228 DFGLSIFFKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVIIYILLCGVPPFWAE 286
DFG + F E IV + +Y PEV L + DVWS G I++ G F +
Sbjct: 185 DFGSATF--DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLF--Q 240
Query: 287 TEEGIAHAIIRGKI 300
T E H ++ KI
Sbjct: 241 THENREHLVMMEKI 254
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 66/128 (51%)
Query: 349 NVSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEE 408
+V L + +K F N+ KK L ++A +L ++ ++ +F +D D +G L+ +E
Sbjct: 19 HVELSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQE 78
Query: 409 LKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFF 468
+ DGL IG + PD+ ++ D + +G + +F+ ++ + ++ F+FF
Sbjct: 79 ILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFF 138
Query: 469 DKNQSGFI 476
D + +G I
Sbjct: 139 DIDGNGKI 146
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 393 FYMMDTDKNGDLTFEELKD--GLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTM 448
F D D NG ++ EELK G + I + D + L++ D++G+G + EF+ M
Sbjct: 135 FKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLM 192
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 102/229 (44%), Gaps = 30/229 (13%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRH 137
D+ GK LGRG FG + +T C+ +A + LK T + + E++I+ H
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 138 LPKHPNIVTYKEAYEDKDA-IYLVMELCEGGELFDRIVNKGH----YTERAAAAVGKTIL 192
+ H N+V A + +++E C+ G L + +K + Y E A + K L
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKE-APEDLYKDFL 147
Query: 193 RIVK-VCHENGV------------MHRDLKPENFLFADGSENSQLKAIDFGLS--IFFKP 237
+ +C+ V +HRDL N L SE + +K DFGL+ I+ P
Sbjct: 148 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDP 204
Query: 238 GEQFCEIVGSPY-YMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
P +MAPE + R Y + DVWS GV+++ I G P+
Sbjct: 205 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 253
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
AD L ++Q+A+ K+ F + D D +G +T +EL +G ++ +++ + D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGN 60
Query: 438 GLLSCDEFVTMSVHL-KRIGNDDILSQAFRFFDKNQSGFI 476
G ++ EF+T K +++ + +AFR FDK+ +G+I
Sbjct: 61 GTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYI 100
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 39/63 (61%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
D +I++ F + D D NG ++ EL+ +G+K++D +V + AD+DG+G ++ +
Sbjct: 80 DSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYE 139
Query: 444 EFV 446
EFV
Sbjct: 140 EFV 142
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 94/229 (41%), Gaps = 45/229 (19%)
Query: 85 FGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD---VRREVEIMRHLPKH 141
FGK LG G FG + G+ A K+A + LK+ D+ + E++IM HL +H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKG------------------HYTERA 183
NIV A + ++ E C G+L + + K H++ +
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 169
Query: 184 AAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL-------SIFFK 236
A + K C +HRD+ N L +G K DFGL S +
Sbjct: 170 AQGMA---FLASKNC-----IHRDVAARNVLLTNGHVA---KIGDFGLARDIMNDSNYIV 218
Query: 237 PGEQFCEIVGSPYYMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
G + +MAPE + Y + DVWS G++++ I G+ P+
Sbjct: 219 KGNARLPVK----WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 263
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
A L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DGN
Sbjct: 1 AQELTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 438 GLLSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
G + EF++ M+ +K +++ L +AF+ FD++ +G I
Sbjct: 61 GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLI 100
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 43/68 (63%)
Query: 383 QDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSC 442
QD ++ + F + D D NG ++ EL+ + +G+K++D +V ++ AD+DG+G ++
Sbjct: 79 QDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINY 138
Query: 443 DEFVTMSV 450
+EFV M V
Sbjct: 139 EEFVRMMV 146
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 10/117 (8%)
Query: 364 SIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDP 423
+I K V+R + N + A+++ M +D D NG + F E L+++ +K+ +
Sbjct: 26 TITTKELGTVMRSLGQNPTE---AELQDMINEVDADGNGTIDFPEF---LSLMARKMKEQ 79
Query: 424 DVKM-LMEAA---DVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
D + L+EA D DGNGL+S E + +L DD + + R D + G I
Sbjct: 80 DSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHI 136
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 92/227 (40%), Gaps = 35/227 (15%)
Query: 85 FGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD---VRREVEIMRHLPKH 141
FGK LG G FG + G+ A K+A + LK+ D+ + E++IM HL +H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-----------VNKGHYTE-----RAAA 185
NIV A + ++ E C G+L + + N H E R
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLL 169
Query: 186 AVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL-------SIFFKPG 238
+ + + +HRD+ N L +G K DFGL S + G
Sbjct: 170 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG---HVAKIGDFGLARDIMNDSNYIVKG 226
Query: 239 EQFCEIVGSPYYMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
+ +MAPE + Y + DVWS G++++ I G+ P+
Sbjct: 227 NARLPVK----WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 269
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNG 438
D L ++Q+A+ K+ F + D D +G +T ++L + +GQ ++ +++ ++ DGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNG 362
Query: 439 LLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
+ +F+TM +K +++ + +AFR F K+ +G+I
Sbjct: 363 TIDFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYI 401
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 350 VSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEEL 409
V GN T QF M K K D +I++ F + D NG ++ +L
Sbjct: 356 VGADGNGTIDFPQFLTMMARKMK---------DTDSEEEIREAFRVFGKDGNGYISAAQL 406
Query: 410 KDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTM 448
+ + +G+K++D +V ++ A +DG+G ++ ++FV M
Sbjct: 407 RHVMTNLGEKLTDEEVDEMIREAGIDGDGQVNYEQFVQM 445
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 113/277 (40%), Gaps = 49/277 (17%)
Query: 89 LGRGEFGITHQCFEIETGETYACKK----IAKEKLK---TEIDIDDVRREVEIMRHLPKH 141
+G GEFG E+ +G K +A + LK TE D E IM H
Sbjct: 15 IGAGEFG------EVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQF-DH 67
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGEL--FDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
PN++ + + ++ E E G L F R N G +T + + I +K
Sbjct: 68 PNVIHLEGVVTKSTPVMIITEFMENGSLDSFLR-QNDGQFTVIQLVGMLRGIAAGMKYLA 126
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK---PGEQFCEIVGSPY---YMAP 253
+ +HR L N L + N K DFGLS F + + +G + AP
Sbjct: 127 DMNYVHRALAARNILV---NSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP 183
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS 311
E ++ R + DVWS G++++ ++ G P+W T + + +AI + D+ R P P
Sbjct: 184 EAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI---EQDY-RLPPPMDC 239
Query: 312 KEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAP 348
A L +++ + W K+ NH P
Sbjct: 240 PSA-----------------LHQLMLDCWQKDRNHRP 259
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 93/213 (43%), Gaps = 32/213 (15%)
Query: 88 ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE-----IDIDDVRREVEIMRHLPKHP 142
E+G G G + +TG A K++ + K E +D+D V + + P
Sbjct: 32 EMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDC-------P 84
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCH- 199
IV + +++ MEL G +++ + G ER +GK + IVK +
Sbjct: 85 YIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERI---LGKMTVAIVKALYY 139
Query: 200 ---ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
++GV+HRD+KP N L E Q+K DFG+S + G YMAPE +
Sbjct: 140 LKEKHGVIHRDVKPSNILL---DERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERI 196
Query: 257 ------RRNYGPEIDVWSAGVIIYILLCGVPPF 283
+ +Y DVWS G+ + L G P+
Sbjct: 197 DPPDPTKPDYDIRADVWSLGISLVELATGQFPY 229
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 28/228 (12%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRH 137
D+ GK LGRG FG + +T C+ +A + LK T + + E++I+ H
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 138 LPKHPNIVTYKEAYEDKDA-IYLVMELCEGGELFDRIVNKGHY---TERAAAAVGKTILR 193
+ H N+V A + +++E C+ G L + +K + + A + K L
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 194 IVK-VCHENGV------------MHRDLKPENFLFADGSENSQLKAIDFGLS--IFFKPG 238
+ +C+ V +HRDL N L SE + +K DFGL+ I+ P
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPD 203
Query: 239 EQFCEIVGSPY-YMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
P +MAPE + R Y + DVWS GV+++ I G P+
Sbjct: 204 XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 105/238 (44%), Gaps = 23/238 (9%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR----REVEIMR 136
++ G+ +G G+FG HQ + I K T D VR +E MR
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTS---DSVREKFLQEALTMR 66
Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
HP+IV + + ++++MELC GEL + + + A+ + L
Sbjct: 67 QF-DHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTAL 124
Query: 197 VCHENG-VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS-PY-YMAP 253
E+ +HRD+ N L S N +K DFGLS + + G P +MAP
Sbjct: 125 AYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAP 181
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKID-FERDPWP 308
E + R + DVW GV ++ IL+ GV PF +G+ + + G+I+ ER P P
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERLPMP 234
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 98/230 (42%), Gaps = 26/230 (11%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKK----IAKEKLK---TEIDIDDVRREVEIMR 136
T + +G GEFG E+ +G K +A + LK TE D E IM
Sbjct: 25 TIERVIGAGEFG------EVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMG 78
Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIV--NKGHYTERAAAAVGKTILRI 194
HPNI+ + + +V E E G L D + N G +T + + I
Sbjct: 79 QF-DHPNIIHLEGVVTKSKPVMIVTEYMENGSL-DTFLKKNDGQFTVIQLVGMLRGISAG 136
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK--PGEQFCEIVGS-PY-Y 250
+K + G +HRDL N L + N K DFGLS + P + G P +
Sbjct: 137 MKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 193
Query: 251 MAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
APE + R + DVWS G++++ ++ G P+W T + + A+ G
Sbjct: 194 TAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEG 243
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 28/228 (12%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRH 137
D+ GK LGRG FG + +T C+ +A + LK T + + E++I+ H
Sbjct: 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 123
Query: 138 LPKHPNIVTYKEAYEDKDA-IYLVMELCEGGELFDRIVNKGHY---TERAAAAVGKTILR 193
+ H N+V A + +++E C+ G L + +K + + A + K L
Sbjct: 124 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 183
Query: 194 IVK-VCHENGV------------MHRDLKPENFLFADGSENSQLKAIDFGLS--IFFKPG 238
+ +C+ V +HRDL N L SE + +K DFGL+ I+ P
Sbjct: 184 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPD 240
Query: 239 EQFCEIVGSPY-YMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
P +MAPE + R Y + DVWS GV+++ I G P+
Sbjct: 241 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 288
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 28/228 (12%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRH 137
D+ GK LGRG FG + +T C+ +A + LK T + + E++I+ H
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 138 LPKHPNIVTYKEAYEDKDA-IYLVMELCEGGELFDRIVNKGHY---TERAAAAVGKTILR 193
+ H N+V A + +++E C+ G L + +K + + A + K L
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 194 IVK-VCHENGV------------MHRDLKPENFLFADGSENSQLKAIDFGLS--IFFKPG 238
+ +C+ V +HRDL N L SE + +K DFGL+ I+ P
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPD 203
Query: 239 EQFCEIVGSPY-YMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
P +MAPE + R Y + DVWS GV+++ I G P+
Sbjct: 204 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 105/238 (44%), Gaps = 23/238 (9%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR----REVEIMR 136
++ G+ +G G+FG HQ + I K T D VR +E MR
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTS---DSVREKFLQEALTMR 446
Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
HP+IV + + ++++MELC GEL + + + A+ + L
Sbjct: 447 QF-DHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTAL 504
Query: 197 VCHENG-VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS-PY-YMAP 253
E+ +HRD+ N L S +K DFGLS + + + G P +MAP
Sbjct: 505 AYLESKRFVHRDIAARNVLV---SATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 561
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKID-FERDPWP 308
E + R + DVW GV ++ IL+ GV PF +G+ + + G+I+ ER P P
Sbjct: 562 ESINFRRFTSASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERLPMP 614
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 29/198 (14%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
+ +G+GEFG ++ G+ Y K+A + +K + E +M L +H N+V
Sbjct: 27 QTIGKGEFG------DVMLGD-YRGNKVAVKCIKNDATAQAFLAEASVMTQL-RHSNLVQ 78
Query: 147 YKEA-YEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI-VKVCHE---- 200
E+K +Y+V E G L D + ++G + G +L+ + VC
Sbjct: 79 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-----SVLGGDCLLKFSLDVCEAMEYL 133
Query: 201 --NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY-YMAPEVLR 257
N +HRDL N L SE++ K DFGL+ K + P + APE LR
Sbjct: 134 EGNNFVHRDLAARNVLV---SEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALR 187
Query: 258 -RNYGPEIDVWSAGVIIY 274
+ + + DVWS G++++
Sbjct: 188 EKKFSTKSDVWSFGILLW 205
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 94/234 (40%), Gaps = 42/234 (17%)
Query: 85 FGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD---VRREVEIMRHLPKH 141
FGK LG G FG + G+ A K+A + LK+ D+ + E++IM HL +H
Sbjct: 35 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 94
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGK----------TI 191
NIV A + ++ E C G+L + + K + A G+
Sbjct: 95 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRP 154
Query: 192 LRIVKVCH-------------ENGVMHRDLKPENFLFADGSENSQLKAIDFGL------- 231
L + + H +HRD+ N L +G K DFGL
Sbjct: 155 LELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA---KIGDFGLARDIMND 211
Query: 232 SIFFKPGEQFCEIVGSPYYMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
S + G + +MAPE + Y + DVWS G++++ I G+ P+
Sbjct: 212 SNYIVKGNARLPV----KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 261
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 105/238 (44%), Gaps = 23/238 (9%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR----REVEIMR 136
++ G+ +G G+FG HQ + I K T D VR +E MR
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTS---DSVREKFLQEALTMR 66
Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
HP+IV + + ++++MELC GEL + + + A+ + L
Sbjct: 67 QF-DHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTAL 124
Query: 197 VCHENG-VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS-PY-YMAP 253
E+ +HRD+ N L S +K DFGLS + + + G P +MAP
Sbjct: 125 AYLESKRFVHRDIAARNVLV---SATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 181
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKID-FERDPWP 308
E + R + DVW GV ++ IL+ GV PF +G+ + + G+I+ ER P P
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERLPMP 234
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 100/228 (43%), Gaps = 28/228 (12%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRH 137
D+ GK LGRG FG + +T C+ +A + LK T + + E++I+ H
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVM-ELCEGGELFDRIVNKGHY---TERAAAAVGKTILR 193
+ H N+V A +V+ E C+ G L + +K + + A + K L
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 194 IVK-VCHENGV------------MHRDLKPENFLFADGSENSQLKAIDFGLS--IFFKPG 238
+ +C+ V +HRDL N L SE + +K DFGL+ I+ P
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPD 194
Query: 239 EQFCEIVGSPY-YMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
P +MAPE + R Y + DVWS GV+++ I G P+
Sbjct: 195 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 99/227 (43%), Gaps = 27/227 (11%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRH 137
D+ GK LGRG FG + +T C+ +A + LK T + + E++I+ H
Sbjct: 28 DRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 87
Query: 138 LPKHPNIVTYKEAYEDKDA-IYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKTILRI 194
+ H N+V A + +++E C+ G L + +K + + + K L +
Sbjct: 88 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTL 147
Query: 195 VK-VCHENGV------------MHRDLKPENFLFADGSENSQLKAIDFGLS--IFFKPGE 239
+C+ V +HRDL N L SE + +K DFGL+ I P
Sbjct: 148 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIXKDPDX 204
Query: 240 QFCEIVGSPY-YMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
P +MAPE + R Y + DVWS GV+++ I G P+
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 29/198 (14%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
+ +G+GEFG ++ G+ Y K+A + +K + E +M L +H N+V
Sbjct: 12 QTIGKGEFG------DVMLGD-YRGNKVAVKCIKNDATAQAFLAEASVMTQL-RHSNLVQ 63
Query: 147 YKEA-YEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI-VKVCHE---- 200
E+K +Y+V E G L D + ++G + G +L+ + VC
Sbjct: 64 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-----SVLGGDCLLKFSLDVCEAMEYL 118
Query: 201 --NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY-YMAPEVLR 257
N +HRDL N L SE++ K DFGL+ K + P + APE LR
Sbjct: 119 EGNNFVHRDLAARNVLV---SEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALR 172
Query: 258 -RNYGPEIDVWSAGVIIY 274
+ + + DVWS G++++
Sbjct: 173 EKKFSTKSDVWSFGILLW 190
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 100/228 (43%), Gaps = 28/228 (12%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRH 137
D+ GK LGRG FG + +T C+ +A + LK T + + E++I+ H
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVM-ELCEGGELFDRIVNKGHY---TERAAAAVGKTILR 193
+ H N+V A +V+ E C+ G L + +K + + A + K L
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 194 IVK-VCHENGV------------MHRDLKPENFLFADGSENSQLKAIDFGLS--IFFKPG 238
+ +C+ V +HRDL N L SE + +K DFGL+ I+ P
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPD 194
Query: 239 EQFCEIVGSPY-YMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
P +MAPE + R Y + DVWS GV+++ I G P+
Sbjct: 195 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 117/276 (42%), Gaps = 38/276 (13%)
Query: 87 KELGRGEFG--ITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNI 144
+ELG G FG +C+ + + + K T D +RE E++ +L +H +I
Sbjct: 21 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL-QHEHI 79
Query: 145 VTYKEAYEDKDAIYLVMELCEGGEL--FDR--------IVN------KGHYTERAAAAVG 188
V + D D + +V E + G+L F R +V+ KG +
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 189 KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI------FFKPGEQFC 242
I + +HRDL N L N +K DFG+S +++ G
Sbjct: 140 SQIASGMVYLASQHFVHRDLATRNCLVG---ANLLVKIGDFGMSRDVYSTDYYRVGGHTM 196
Query: 243 EIVGSPYYMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKI 300
+ +M PE ++ R + E DVWS GVI++ I G P++ + + I +G++
Sbjct: 197 LPI---RWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRV 253
Query: 301 DFERDPWPKVS-KEAKELVKNMLDPNPYNRLTLEEV 335
ER P+V KE +++ P RL ++E+
Sbjct: 254 -LER---PRVCPKEVYDVMLGCWQREPQQRLNIKEI 285
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 26/227 (11%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKK----IAKEKLK---TEIDIDDVRREVEIMRHLP 139
K +G GEFG E+ +G K +A + LK TE D E IM
Sbjct: 51 KVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF- 103
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKV 197
HPNI+ + + +V E E G L D + K +T + + I +K
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK--PGEQFCEIVGS-PY-YMAP 253
+ G +HRDL N L + N K DFGLS + P + G P + +P
Sbjct: 163 LSDMGAVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
E + R + DVWS G++++ ++ G P+W + + + A+ G
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 100/228 (43%), Gaps = 28/228 (12%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRH 137
D+ GK LGRG FG + +T C+ +A + LK T + + E++I+ H
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 138 LPKHPNIVTYKEAYEDKDA-IYLVMELCEGGELFDRIVNKGHY---TERAAAAVGKTILR 193
+ H N+V A + +++E C+ G L + +K + + A + K L
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 194 IVK-VCHENGV------------MHRDLKPENFLFADGSENSQLKAIDFGLS--IFFKPG 238
+ +C+ V +HRDL N L SE + +K DFGL+ I P
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIXKDPD 194
Query: 239 EQFCEIVGSPY-YMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
P +MAPE + R Y + DVWS GV+++ I G P+
Sbjct: 195 XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 100/228 (43%), Gaps = 28/228 (12%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRH 137
D+ GK LGRG FG + +T C+ +A + LK T + + E++I+ H
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 138 LPKHPNIVTYKEAYEDKDA-IYLVMELCEGGELFDRIVNKGHY---TERAAAAVGKTILR 193
+ H N+V A + +++E C+ G L + +K + + A + K L
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 194 IVK-VCHENGV------------MHRDLKPENFLFADGSENSQLKAIDFGLS--IFFKPG 238
+ +C+ V +HRDL N L SE + +K DFGL+ I P
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIXKDPD 203
Query: 239 EQFCEIVGSPY-YMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
P +MAPE + R Y + DVWS GV+++ I G P+
Sbjct: 204 XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 26/227 (11%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKK----IAKEKLK---TEIDIDDVRREVEIMRHLP 139
K +G GEFG E+ +G K +A + LK TE D E IM
Sbjct: 51 KVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF- 103
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKV 197
HPNI+ + + +V E E G L D + K +T + + I +K
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK--PGEQFCEIVGS-PY-YMAP 253
+ G +HRDL N L + N K DFGLS + P + G P + +P
Sbjct: 163 LSDMGFVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
E + R + DVWS G++++ ++ G P+W + + + A+ G
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 20/222 (9%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
TF KELG G+FG+ + G+ K+ KE +E D+ E ++M +L H
Sbjct: 12 TFLKELGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNL-SHEK 65
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH-YTERAAAAVGKTILRIVKVCHENG 202
+V + I+++ E G L + + H + + + K + ++
Sbjct: 66 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 125
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRRN 259
+HRDL N L D +K DFGLS + E + VGS + + PEVL +
Sbjct: 126 FLHRDLAARNCLVND---QGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYS 181
Query: 260 -YGPEIDVWSAGVIIY-ILLCGVPPFW----AETEEGIAHAI 295
+ + D+W+ GV+++ I G P+ +ET E IA +
Sbjct: 182 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 223
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 26/227 (11%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKK----IAKEKLK---TEIDIDDVRREVEIMRHLP 139
K +G GEFG E+ +G K +A + LK TE D E IM
Sbjct: 22 KVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF- 74
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKV 197
HPNI+ + + +V E E G L D + K +T + + I +K
Sbjct: 75 DHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKY 133
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK--PGEQFCEIVGS-PY-YMAP 253
+ G +HRDL N L + N K DFGLS + P + G P + +P
Sbjct: 134 LSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 190
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
E + R + DVWS G++++ ++ G P+W + + + A+ G
Sbjct: 191 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 237
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 26/227 (11%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKK----IAKEKLK---TEIDIDDVRREVEIMRHLP 139
K +G GEFG E+ +G K +A + LK TE D E IM
Sbjct: 22 KVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF- 74
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKV 197
HPNI+ + + +V E E G L D + K +T + + I +K
Sbjct: 75 DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKY 133
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK--PGEQFCEIVGS-PY-YMAP 253
+ G +HRDL N L + N K DFGLS + P + G P + +P
Sbjct: 134 LSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 190
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
E + R + DVWS G++++ ++ G P+W + + + A+ G
Sbjct: 191 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 237
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 20/222 (9%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
TF KELG G+FG+ + G+ K+ KE +E D+ E ++M +L H
Sbjct: 27 TFLKELGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNL-SHEK 80
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH-YTERAAAAVGKTILRIVKVCHENG 202
+V + I+++ E G L + + H + + + K + ++
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 140
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRRN 259
+HRDL N L D +K DFGLS + E + VGS + + PEVL +
Sbjct: 141 FLHRDLAARNCLVND---QGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYS 196
Query: 260 -YGPEIDVWSAGVIIY-ILLCGVPPFW----AETEEGIAHAI 295
+ + D+W+ GV+++ I G P+ +ET E IA +
Sbjct: 197 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 238
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 20/222 (9%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
TF KELG G+FG+ + G+ K+ KE +E D+ E ++M +L H
Sbjct: 11 TFLKELGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNL-SHEK 64
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH-YTERAAAAVGKTILRIVKVCHENG 202
+V + I+++ E G L + + H + + + K + ++
Sbjct: 65 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 124
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRRN 259
+HRDL N L D +K DFGLS + E + VGS + + PEVL +
Sbjct: 125 FLHRDLAARNCLVND---QGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYS 180
Query: 260 -YGPEIDVWSAGVIIY-ILLCGVPPFW----AETEEGIAHAI 295
+ + D+W+ GV+++ I G P+ +ET E IA +
Sbjct: 181 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 222
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 26/227 (11%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKK----IAKEKLK---TEIDIDDVRREVEIMRHLP 139
K +G GEFG E+ +G K +A + LK TE D E IM
Sbjct: 39 KVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF- 91
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKV 197
HPNI+ + + +V E E G L D + K +T + + I +K
Sbjct: 92 DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKY 150
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK--PGEQFCEIVGS-PY-YMAP 253
+ G +HRDL N L + N K DFGLS + P + G P + +P
Sbjct: 151 LSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 207
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
E + R + DVWS G++++ ++ G P+W + + + A+ G
Sbjct: 208 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 254
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 29/198 (14%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
+ +G+GEFG ++ G+ Y K+A + +K + E +M L +H N+V
Sbjct: 199 QTIGKGEFG------DVMLGD-YRGNKVAVKCIKNDATAQAFLAEASVMTQL-RHSNLVQ 250
Query: 147 YKEA-YEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI-VKVCHE---- 200
E+K +Y+V E G L D + ++G + G +L+ + VC
Sbjct: 251 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-----SVLGGDCLLKFSLDVCEAMEYL 305
Query: 201 --NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY-YMAPEVLR 257
N +HRDL N L SE++ K DFGL+ K + P + APE LR
Sbjct: 306 EGNNFVHRDLAARNVLV---SEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALR 359
Query: 258 -RNYGPEIDVWSAGVIIY 274
+ + + DVWS G++++
Sbjct: 360 EKKFSTKSDVWSFGILLW 377
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 20/222 (9%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
TF KELG G+FG+ + G+ K+ KE +E D+ E ++M +L H
Sbjct: 7 TFLKELGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNL-SHEK 60
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH-YTERAAAAVGKTILRIVKVCHENG 202
+V + I+++ E G L + + H + + + K + ++
Sbjct: 61 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 120
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRRN 259
+HRDL N L D +K DFGLS + E + VGS + + PEVL +
Sbjct: 121 FLHRDLAARNCLVND---QGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYS 176
Query: 260 -YGPEIDVWSAGVIIY-ILLCGVPPFW----AETEEGIAHAI 295
+ + D+W+ GV+++ I G P+ +ET E IA +
Sbjct: 177 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 218
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 26/227 (11%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKK----IAKEKLK---TEIDIDDVRREVEIMRHLP 139
K +G GEFG E+ +G K +A + LK TE D E IM
Sbjct: 51 KVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF- 103
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKV 197
HPNI+ + + +V E E G L D + K +T + + I +K
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK--PGEQFCEIVGS-PY-YMAP 253
+ G +HRDL N L + N K DFGLS + P + G P + +P
Sbjct: 163 LSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
E + R + DVWS G++++ ++ G P+W + + + A+ G
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 26/227 (11%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKK----IAKEKLK---TEIDIDDVRREVEIMRHLP 139
K +G GEFG E+ +G K +A + LK TE D E IM
Sbjct: 51 KVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF- 103
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKV 197
HPNI+ + + +V E E G L D + K +T + + I +K
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK--PGEQFCEIVGS-PY-YMAP 253
+ G +HRDL N L + N K DFGLS + P + G P + +P
Sbjct: 163 LSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
E + R + DVWS G++++ ++ G P+W + + + A+ G
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 26/227 (11%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKK----IAKEKLK---TEIDIDDVRREVEIMRHLP 139
K +G GEFG E+ +G K +A + LK TE D E IM
Sbjct: 51 KVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF- 103
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKV 197
HPNI+ + + +V E E G L D + K +T + + I +K
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK--PGEQFCEIVGS-PY-YMAP 253
+ G +HRDL N L + N K DFGLS + P + G P + +P
Sbjct: 163 LSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
E + R + DVWS G++++ ++ G P+W + + + A+ G
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 99/228 (43%), Gaps = 28/228 (12%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRH 137
D+ GK LGRG FG + +T C+ +A + LK T + + E++I+ H
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVM-ELCEGGELFDRIVNKGHY---TERAAAAVGKTILR 193
+ H N+V A +V+ E C+ G L + +K + + A + K L
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 194 IVK-VCHENGV------------MHRDLKPENFLFADGSENSQLKAIDFGLS--IFFKPG 238
+ +C+ V +HRDL N L SE + +K DFGL+ I P
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIXKDPD 194
Query: 239 EQFCEIVGSPY-YMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
P +MAPE + R Y + DVWS GV+++ I G P+
Sbjct: 195 XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 20/222 (9%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
TF KELG G+FG+ + G+ K+ KE +E D+ E ++M +L H
Sbjct: 18 TFLKELGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNL-SHEK 71
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH-YTERAAAAVGKTILRIVKVCHENG 202
+V + I+++ E G L + + H + + + K + ++
Sbjct: 72 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 131
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRRN 259
+HRDL N L D +K DFGLS + E + VGS + + PEVL +
Sbjct: 132 FLHRDLAARNCLVND---QGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYS 187
Query: 260 -YGPEIDVWSAGVIIY-ILLCGVPPFW----AETEEGIAHAI 295
+ + D+W+ GV+++ I G P+ +ET E IA +
Sbjct: 188 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 229
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 29/198 (14%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
+ +G+GEFG ++ G+ Y K+A + +K + E +M L +H N+V
Sbjct: 18 QTIGKGEFG------DVMLGD-YRGNKVAVKCIKNDATAQAFLAEASVMTQL-RHSNLVQ 69
Query: 147 YKEA-YEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI-VKVCHE---- 200
E+K +Y+V E G L D + ++G + G +L+ + VC
Sbjct: 70 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-----SVLGGDCLLKFSLDVCEAMEYL 124
Query: 201 --NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY-YMAPEVLR 257
N +HRDL N L SE++ K DFGL+ K + P + APE LR
Sbjct: 125 EGNNFVHRDLAARNVLV---SEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALR 178
Query: 258 R-NYGPEIDVWSAGVIIY 274
+ + DVWS G++++
Sbjct: 179 EAAFSTKSDVWSFGILLW 196
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
AD L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 438 GLLSCDEFVTMSVH-LKRIGNDDILSQAFR 466
G + EF+TM +K +++ + +AFR
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFR 90
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 26/227 (11%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKK----IAKEKLK---TEIDIDDVRREVEIMRHLP 139
K +G GEFG E+ +G K +A + LK TE D E IM
Sbjct: 51 KVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF- 103
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKV 197
HPNI+ + + +V E E G L D + K +T + + I +K
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK--PGEQFCEIVGS-PY-YMAP 253
+ G +HRDL N L + N K DFGLS + P + G P + +P
Sbjct: 163 LSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
E + R + DVWS G++++ ++ G P+W + + + A+ G
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 26/227 (11%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKK----IAKEKLK---TEIDIDDVRREVEIMRHLP 139
K +G GEFG E+ +G K +A + LK TE D E IM
Sbjct: 51 KVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF- 103
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKV 197
HPNI+ + + +V E E G L D + K +T + + I +K
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK--PGEQFCEIVGS-PY-YMAP 253
+ G +HRDL N L + N K DFGLS + P + G P + +P
Sbjct: 163 LSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
E + R + DVWS G++++ ++ G P+W + + + A+ G
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 26/227 (11%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKK----IAKEKLK---TEIDIDDVRREVEIMRHLP 139
K +G GEFG E+ +G K +A + LK TE D E IM
Sbjct: 49 KVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF- 101
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKV 197
HPNI+ + + +V E E G L D + K +T + + I +K
Sbjct: 102 DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKY 160
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK--PGEQFCEIVGS-PY-YMAP 253
+ G +HRDL N L + N K DFGLS + P + G P + +P
Sbjct: 161 LSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 217
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
E + R + DVWS G++++ ++ G P+W + + + A+ G
Sbjct: 218 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 264
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 20/222 (9%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
TF KELG G+FG+ + G+ K+ KE +E D+ E ++M +L H
Sbjct: 27 TFLKELGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNL-SHEK 80
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH-YTERAAAAVGKTILRIVKVCHENG 202
+V + I+++ E G L + + H + + + K + ++
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 140
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRRN 259
+HRDL N L D +K DFGLS + E+ VGS + + PEVL +
Sbjct: 141 FLHRDLAARNCLVND---QGVVKVSDFGLSRYVLDDEE-TSSVGSKFPVRWSPPEVLMYS 196
Query: 260 -YGPEIDVWSAGVIIY-ILLCGVPPFW----AETEEGIAHAI 295
+ + D+W+ GV+++ I G P+ +ET E IA +
Sbjct: 197 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 238
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 98/225 (43%), Gaps = 26/225 (11%)
Query: 89 LGRGEFGITHQCFEIETGETYACKK----IAKEKLK---TEIDIDDVRREVEIMRHLPKH 141
+G GEFG E+ +G K +A + LK TE D E IM H
Sbjct: 51 IGAGEFG------EVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQF-DH 103
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCH 199
PN+V + + +V+E E G L D + K G +T + + I ++
Sbjct: 104 PNVVHLEGVVTRGKPVMIVIEFMENGAL-DAFLRKHDGQFTVIQLVGMLRGIAAGMRYLA 162
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK--PGEQFCEIVGS-PY-YMAPEV 255
+ G +HRDL N L + N K DFGLS + P + G P + APE
Sbjct: 163 DMGYVHRDLAARNILV---NSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEA 219
Query: 256 LR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
++ R + DVWS G++++ ++ G P+W + + + AI G
Sbjct: 220 IQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 264
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 3/98 (3%)
Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
L ++Q +I++ F + DTD +G + +ELK + +G + ++K ++ D DG+G +
Sbjct: 22 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 81
Query: 441 SCDEFVTMSVHL--KRIGNDDILSQAFRFFDKNQSGFI 476
+EF+TM +R ++IL +AFR FD + SG I
Sbjct: 82 DFEEFLTMMTAKMGERDSREEIL-KAFRLFDDDNSGTI 118
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 96/227 (42%), Gaps = 26/227 (11%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKK----IAKEKLK---TEIDIDDVRREVEIMRHLP 139
K +G GEFG E+ +G K +A + LK TE D E IM
Sbjct: 51 KVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF- 103
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKV 197
HPNI+ + + +V E E G L D + K +T + + I +K
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK--PGEQFCEIVGS-PY-YMAP 253
+ G +HRDL N L + N K DFGL+ + P + G P + +P
Sbjct: 163 LSDMGYVHRDLAARNILI---NSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
E + R + DVWS G++++ ++ G P+W + + + A+ G
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 99/231 (42%), Gaps = 29/231 (12%)
Query: 76 EGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIM 135
E + +K+ G+++G G FG + I+T E A K E +KT+ + E +I
Sbjct: 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL---ENVKTKHP--QLLYESKIY 56
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGKTILR 193
R L I + + D LVM+L +LF+ K + + + ++
Sbjct: 57 RILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRK--LSLKTVLMLADQMIN 114
Query: 194 IVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK--------PGEQFCEIV 245
V+ H +HRD+KP+NFL G +Q+ IDFGL+ ++ P + +
Sbjct: 115 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLT 174
Query: 246 GSPYY------MAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEG 290
G+ Y + E RR+ D+ S G ++ L G P W + G
Sbjct: 175 GTARYASVNTHLGIEQSRRD-----DLESLGYVLMYFLRGSLP-WQGLKAG 219
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 95/227 (41%), Gaps = 26/227 (11%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKK----IAKEKLK---TEIDIDDVRREVEIMRHLP 139
K +G GEFG E+ +G K +A + LK TE D E IM
Sbjct: 51 KVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF- 103
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKV 197
HPNI+ + + +V E E G L D + K +T + + I +K
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK--PGEQFCEIVGS-PY-YMAP 253
+ G +HRDL N L + N K DFGL + P + G P + +P
Sbjct: 163 LSDMGYVHRDLAARNILI---NSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
E + R + DVWS G++++ ++ G P+W + + + A+ G
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRH 137
D+ GK LGRG FG + +T + +A + LK T + + E++I+ H
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 138 LPKHPNIVTYKEA-YEDKDAIYLVMELCEGGELFDRI------------VNKGHYTERAA 184
+ H N+V A + + +++E C+ G L + + K T
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 185 AAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS--IFFKPGEQFC 242
+ + ++ +HRDL N L SE + +K DFGL+ I+ P
Sbjct: 147 IXYSFQVAKGMEFLASRKXIHRDLAARNILL---SEKNVVKIXDFGLARDIYKDPDYVRK 203
Query: 243 EIVGSPY-YMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
P +MAPE + R Y + DVWS GV+++ I G P+
Sbjct: 204 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 247
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 24/224 (10%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRH 137
D+ GK LGRG FG + +T + +A + LK T + + E++I+ H
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 138 LPKHPNIVTYKEAYEDKDA-IYLVMELCEGGELFDRI------------VNKGHYTERAA 184
+ H N+V A + +++E C+ G L + + K T
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 185 AAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS--IFFKPGEQFC 242
+ + ++ +HRDL N L SE + +K DFGL+ I+ P
Sbjct: 147 ICYSFQVAKGMEFLASRKXIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPDYVRK 203
Query: 243 EIVGSPY-YMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
P +MAPE + R Y + DVWS GV+++ I G P+
Sbjct: 204 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 247
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 2/124 (1%)
Query: 353 GGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDG 412
G +V K + ++ KF+K + ++A + ++K F ++D D G +T E+LK G
Sbjct: 18 GIHVLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKG 77
Query: 413 LNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQ 472
L G K+ + +L++ D DG+G + EF+ ++ K++ ++ AFR FD +
Sbjct: 78 LEKDGLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDRKQLSK-KLIYCAFRVFDVDN 135
Query: 473 SGFI 476
G I
Sbjct: 136 DGEI 139
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 9/154 (5%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
++Y G+++G G FG + +I GE A K + ++ I E +I + +
Sbjct: 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHI-----ESKIYKMMQG 63
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
I T + + D +VMEL +LF+ K ++ + + ++ ++
Sbjct: 64 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRK--FSLKTVLLLADQMISRIEYI 121
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLS 232
H +HRD+KP+NFL G + + + IDFGL+
Sbjct: 122 HSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 337 ENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVVADNL-PQDQMAQIKQMFYM 395
EN + + + N +++F K + L +A L Q++ ++ +F
Sbjct: 12 ENLYFQGKESGIELPSLANAIENMRKFQNSQKLAQAALLYMASKLTSQEETKELTDIFRH 71
Query: 396 MDTDKNGDLTFEELKDGLNMI-GQKVS-------DPDVKMLMEAADVDGNGLLSCDEFVT 447
+D + +G L +EL DG + + G++V+ + +V ++ AAD D NG + EFVT
Sbjct: 72 IDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVT 131
Query: 448 MSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
+++ K + + D L AF+ FD++ +G I
Sbjct: 132 VAMDRKSLLSKDKLESAFQKFDQDGNGKI 160
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 27/206 (13%)
Query: 88 ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDID-DVRREVEIMRHLPKHPN-IV 145
+LG+G FG C G+ K+ + D D +RE++I++ L H + IV
Sbjct: 17 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL--HSDFIV 74
Query: 146 TYKEAY--EDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH---- 199
Y+ + ++ LVME G L D + RA + +L ++C
Sbjct: 75 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR-----HRARLDASRLLLYSSQICKGMEY 129
Query: 200 --ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP-----YYMA 252
+HRDL N L + +K DFGL+ P ++ +V P ++ A
Sbjct: 130 LGSRRCVHRDLAARNILV---ESEAHVKIADFGLAKLL-PLDKDYYVVREPGQSPIFWYA 185
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILL 277
PE L N + + DVWS GV++Y L
Sbjct: 186 PESLSDNIFSRQSDVWSFGVVLYELF 211
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 9/159 (5%)
Query: 76 EGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIM 135
E + ++Y G+++G G FG + +I GE A K + ++ I E +I
Sbjct: 2 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHI-----ESKIY 56
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGKTILR 193
+ + I T + + D +VMEL +LF+ K ++ + + ++
Sbjct: 57 KMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRK--FSLKTVLLLADQMIS 114
Query: 194 IVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS 232
++ H +HRD+KP+NFL G + + + IDFGL+
Sbjct: 115 RIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 153
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 20/222 (9%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
TF KELG G+FG+ + G+ K+ KE +E D+ E ++M +L H
Sbjct: 12 TFLKELGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNL-SHEK 65
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH-YTERAAAAVGKTILRIVKVCHENG 202
+V + I+++ E G L + + H + + + K + ++
Sbjct: 66 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 125
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRRN 259
+HRDL N L D +K DFGLS + E + GS + + PEVL +
Sbjct: 126 FLHRDLAARNCLVND---QGVVKVSDFGLSRYVLDDE-YTSSRGSKFPVRWSPPEVLMYS 181
Query: 260 -YGPEIDVWSAGVIIY-ILLCGVPPFW----AETEEGIAHAI 295
+ + D+W+ GV+++ I G P+ +ET E IA +
Sbjct: 182 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 223
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 92/235 (39%), Gaps = 32/235 (13%)
Query: 124 DIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERA 183
D D E+E++ L HPNI+ A E + +YL +E G L D +
Sbjct: 68 DHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDP 127
Query: 184 AAAVGKT----------------ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAI 227
A A+ + + R + + +HRDL N L EN K
Sbjct: 128 AFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---ENYVAKIA 184
Query: 228 DFGLS----IFFKPGEQFCEIVGSPYYMAPEVLRRN-YGPEIDVWSAGVIIY-ILLCGVP 281
DFGLS ++ K + +MA E L + Y DVWS GV+++ I+ G
Sbjct: 185 DFGLSRGQEVYVKKTMGRLPVR----WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT 240
Query: 282 PFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVL 336
P+ T + + +G + + E +L++ PY R + ++L
Sbjct: 241 PYCGMTCAELYEKLPQG---YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 292
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 27/206 (13%)
Query: 88 ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDID-DVRREVEIMRHLPKHPN-IV 145
+LG+G FG C G+ K+ + D D +RE++I++ L H + IV
Sbjct: 30 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL--HSDFIV 87
Query: 146 TYKEAY--EDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH---- 199
Y+ + ++ LVME G L D + RA + +L ++C
Sbjct: 88 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR-----HRARLDASRLLLYSSQICKGMEY 142
Query: 200 --ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP-----YYMA 252
+HRDL N L + +K DFGL+ P ++ +V P ++ A
Sbjct: 143 LGSRRCVHRDLAARNILV---ESEAHVKIADFGLAKLL-PLDKDYYVVREPGQSPIFWYA 198
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILL 277
PE L N + + DVWS GV++Y L
Sbjct: 199 PESLSDNIFSRQSDVWSFGVVLYELF 224
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 90/231 (38%), Gaps = 36/231 (15%)
Query: 85 FGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD---VRREVEIMRHLPKH 141
FGK LG G FG +T ++A + LK + D + + E+++M L H
Sbjct: 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSH 108
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH----------------------- 178
NIV A IYL+ E C G+L + + +K
Sbjct: 109 ENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNV 168
Query: 179 YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG 238
T + + ++ +HRDL N L G +K DFGL+
Sbjct: 169 LTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHG---KVVKICDFGLARDIMSD 225
Query: 239 EQFCEIVGSPY----YMAPEVLRRN-YGPEIDVWSAGVIIY-ILLCGVPPF 283
+ + G+ +MAPE L Y + DVWS G++++ I GV P+
Sbjct: 226 SNYV-VRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPY 275
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 27/206 (13%)
Query: 88 ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDID-DVRREVEIMRHLPKHPN-IV 145
+LG+G FG C G+ K+ + D D +RE++I++ L H + IV
Sbjct: 18 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL--HSDFIV 75
Query: 146 TYKEAY--EDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH---- 199
Y+ + ++ LVME G L D + RA + +L ++C
Sbjct: 76 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR-----HRARLDASRLLLYSSQICKGMEY 130
Query: 200 --ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP-----YYMA 252
+HRDL N L + +K DFGL+ P ++ +V P ++ A
Sbjct: 131 LGSRRCVHRDLAARNILV---ESEAHVKIADFGLAKLL-PLDKDYYVVREPGQSPIFWYA 186
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILL 277
PE L N + + DVWS GV++Y L
Sbjct: 187 PESLSDNIFSRQSDVWSFGVVLYELF 212
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 92/235 (39%), Gaps = 32/235 (13%)
Query: 124 DIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERA 183
D D E+E++ L HPNI+ A E + +YL +E G L D +
Sbjct: 58 DHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDP 117
Query: 184 AAAVGKT----------------ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAI 227
A A+ + + R + + +HRDL N L EN K
Sbjct: 118 AFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---ENYVAKIA 174
Query: 228 DFGLS----IFFKPGEQFCEIVGSPYYMAPEVLRRN-YGPEIDVWSAGVIIY-ILLCGVP 281
DFGLS ++ K + +MA E L + Y DVWS GV+++ I+ G
Sbjct: 175 DFGLSRGQEVYVKKTMGRLPVR----WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT 230
Query: 282 PFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVL 336
P+ T + + +G + + E +L++ PY R + ++L
Sbjct: 231 PYCGMTCAELYEKLPQG---YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 282
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
+KY G+++G G FG + I +GE A K + ++ I E + + +
Sbjct: 9 NKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHI-----ESKFYKMMQG 63
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
I + K + D +VMEL +LF+ K ++ + + ++ ++
Sbjct: 64 GVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRK--FSLKTVLLLADQMISRIEYI 121
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLS 232
H +HRD+KP+NFL G + + + IDFGL+
Sbjct: 122 HSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 44/71 (61%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
AD L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 438 GLLSCDEFVTM 448
G + EF+TM
Sbjct: 61 GTIDFPEFLTM 71
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 44/71 (61%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
AD L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DGN
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 438 GLLSCDEFVTM 448
G + EF+TM
Sbjct: 62 GTIDFPEFLTM 72
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 27/206 (13%)
Query: 88 ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDID-DVRREVEIMRHLPKHPN-IV 145
+LG+G FG C G+ K+ + D D +RE++I++ L H + IV
Sbjct: 14 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL--HSDFIV 71
Query: 146 TYKEAY--EDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH---- 199
Y+ + + LVME G L D + RA + +L ++C
Sbjct: 72 KYRGVSYGPGRPELRLVMEYLPSGCLRDFLQR-----HRARLDASRLLLYSSQICKGMEY 126
Query: 200 --ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP-----YYMA 252
+HRDL N L + +K DFGL+ P ++ +V P ++ A
Sbjct: 127 LGSRRCVHRDLAARNILV---ESEAHVKIADFGLAKLL-PLDKDXXVVREPGQSPIFWYA 182
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILL 277
PE L N + + DVWS GV++Y L
Sbjct: 183 PESLSDNIFSRQSDVWSFGVVLYELF 208
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 17/196 (8%)
Query: 88 ELGRGEFGITHQ-CFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
ELG G FG Q + + + K+ K+ + + D +++ RE +IM L +P IV
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE-KADTEEMMREAQIMHQL-DNPYIVR 74
Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI---VKVCHENGV 203
+ +A+ LVME+ GG L +V G E + V + + ++ +K E
Sbjct: 75 LIGVCQ-AEALMLVMEMAGGGPLHKFLV--GKREEIPVSNVAELLHQVSMGMKYLEEKNF 131
Query: 204 MHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS---PY-YMAPEVLR-R 258
+HRDL N L + K DFGLS + + + P + APE + R
Sbjct: 132 VHRDLAARNVLLVN---RHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR 188
Query: 259 NYGPEIDVWSAGVIIY 274
+ DVWS GV ++
Sbjct: 189 KFSSRSDVWSYGVTMW 204
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 44/71 (61%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
AD L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 438 GLLSCDEFVTM 448
G + EF+TM
Sbjct: 61 GTIDFPEFLTM 71
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 95/226 (42%), Gaps = 26/226 (11%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRH 137
D+ GK LGRG FG + +T + +A + LK T + + E++I+ H
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 138 LPKHPNIVTYKEAYEDKDA-IYLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRI- 194
+ H N+V A + +++E C+ G L + +K + + K L +
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLE 148
Query: 195 ------------VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS--IFFKPGEQ 240
++ +HRDL N L SE + +K DFGL+ I P
Sbjct: 149 HLIXYSFQVAKGMEFLASRKXIHRDLAARNILL---SEKNVVKICDFGLARDIXKDPDXV 205
Query: 241 FCEIVGSPY-YMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
P +MAPE + R Y + DVWS GV+++ I G P+
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 44/71 (61%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
AD L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 438 GLLSCDEFVTM 448
G + EF+TM
Sbjct: 61 GTIDFPEFLTM 71
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 44/71 (61%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
AD L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 438 GLLSCDEFVTM 448
G + EF+TM
Sbjct: 61 GTIDFPEFLTM 71
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 100/236 (42%), Gaps = 40/236 (16%)
Query: 80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
++ G+ +G+G FG Q + A + I E+ E + +REV R
Sbjct: 32 FEQLEIGELIGKGRFG---QVYHGRWHGEVAIRLIDIER-DNEDQLKAFKREVMAYRQ-T 86
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI--------VNKGHYTERAAAAVGKTI 191
+H N+V + A + ++ LC+G L+ + VNK + + I
Sbjct: 87 RHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNK-------TRQIAQEI 139
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL---SIFFKPGEQFCEIV--- 245
++ + H G++H+DLK +N + +N ++ DFGL S + G + ++
Sbjct: 140 VKGMGYLHAKGILHKDLKSKNVFY----DNGKVVITDFGLFSISGVLQAGRREDKLRIQN 195
Query: 246 GSPYYMAPEVLRR----------NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGI 291
G ++APE++R+ + DV++ G I Y L PF + E I
Sbjct: 196 GWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAI 251
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 111/267 (41%), Gaps = 35/267 (13%)
Query: 87 KELGRGEFG--ITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNI 144
+ELG G FG +C+ + + + K ++ D RE E++ +L +H +I
Sbjct: 19 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL-QHEHI 77
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKG-------------HYTERAAAAVGKTI 191
V + + D + +V E + G+L + G T+ + + I
Sbjct: 78 VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQI 137
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI------FFKPGEQFCEIV 245
+ +HRDL N L EN +K DFG+S +++ G +
Sbjct: 138 AAGMVYLASQHFVHRDLATRNCLVG---ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 194
Query: 246 GSPYYMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFE 303
+M PE ++ R + E DVWS GV+++ I G P++ + + I +G++ +
Sbjct: 195 R---WMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRV-LQ 250
Query: 304 RDPWPKVS-KEAKELVKNMLDPNPYNR 329
R P+ +E EL+ P+ R
Sbjct: 251 R---PRTCPQEVYELMLGCWQREPHMR 274
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 122/281 (43%), Gaps = 41/281 (14%)
Query: 84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
T KELG G+FG+ G+ K+ KE +E D+ +E + M L HP
Sbjct: 11 TLLKELGSGQFGVVK--LGKWKGQYDVAVKMIKEGSMSE---DEFFQEAQTMMKL-SHPK 64
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE--- 200
+V + + IY+V E G L + + + G E + +++++C++
Sbjct: 65 LVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPS---------QLLEMCYDVCE 115
Query: 201 -------NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---Y 250
+ +HRDL N L + +K DFG++ + +Q+ VG+ + +
Sbjct: 116 GMAFLESHQFIHRDLAARNCLV---DRDLCVKVSDFGMTRYVL-DDQYVSSVGTKFPVKW 171
Query: 251 MAPEVLRR-NYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP 308
APEV Y + DVW+ G++++ + G P+ T + + +G R P
Sbjct: 172 SAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQG----HRLYRP 227
Query: 309 KVSKEA-KELVKNMLDPNPYNRLTLEEVLEN--PWIKNDNH 346
++ + +++ + P R T +++L + P + D H
Sbjct: 228 HLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKDKH 268
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 44/71 (61%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
AD L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 438 GLLSCDEFVTM 448
G + EF+TM
Sbjct: 61 GTIDFPEFLTM 71
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 77/186 (41%), Gaps = 13/186 (6%)
Query: 121 TEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGEL--FDRIVNKGH 178
TE D E IM HPNI+ + +V E E G L F R + G
Sbjct: 90 TERQRRDFLSEASIMGQF-DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR-THDGQ 147
Query: 179 YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-- 236
+T + + + ++ + G +HRDL N L N K DFGLS +
Sbjct: 148 FTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLV---DSNLVCKVSDFGLSRVLEDD 204
Query: 237 PGEQFCEIVGS-PY-YMAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIA 292
P + G P + APE + R + DVWS GV+++ +L G P+W T +
Sbjct: 205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVI 264
Query: 293 HAIIRG 298
++ G
Sbjct: 265 SSVEEG 270
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 92/235 (39%), Gaps = 32/235 (13%)
Query: 124 DIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERA 183
D D E+E++ L HPNI+ A E + +YL +E G L D +
Sbjct: 65 DHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDP 124
Query: 184 AAAVGKT----------------ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAI 227
A A+ + + R + + +HR+L N L EN K
Sbjct: 125 AFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVG---ENYVAKIA 181
Query: 228 DFGLS----IFFKPGEQFCEIVGSPYYMAPEVLRRN-YGPEIDVWSAGVIIY-ILLCGVP 281
DFGLS ++ K + +MA E L + Y DVWS GV+++ I+ G
Sbjct: 182 DFGLSRGQEVYVKKTMGRLPVR----WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT 237
Query: 282 PFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVL 336
P+ T + + +G + + E +L++ PY R + ++L
Sbjct: 238 PYCGMTCAELYEKLPQG---YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 289
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
+ NL ++Q+A+ K+ F + D D NG ++ EL + +G S+ +V LM DVDGN
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 60
Query: 438 GLLSCDEFVT-MSVHLK 453
+ EF+ MS LK
Sbjct: 61 HQIEFSEFLALMSRQLK 77
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 112/284 (39%), Gaps = 33/284 (11%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD---VRREVEIMRH 137
++ +FGK LG G FG + ++ A +A + LK + + + E++++ +
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAV-------- 187
L H NIV A ++ E C G+L + + K + + A+
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 188 --------GKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
+ + + +HRDL N L G K DFGL+ K
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT---KICDFGLARHIKNDS 222
Query: 240 QFCEIVGSPY----YMAPE-VLRRNYGPEIDVWSAGVIIYILL-CGVPPFWAETEEGIAH 293
+ + G+ +MAPE + Y E DVWS G+ ++ L G P+ + +
Sbjct: 223 NYV-VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 281
Query: 294 AIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE 337
+I K F E +++K D +P R T +++++
Sbjct: 282 KMI--KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 112/284 (39%), Gaps = 33/284 (11%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD---VRREVEIMRH 137
++ +FGK LG G FG + ++ A +A + LK + + + E++++ +
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAV-------- 187
L H NIV A ++ E C G+L + + K + + A+
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142
Query: 188 --------GKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
+ + + +HRDL N L G K DFGL+ K
Sbjct: 143 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT---KICDFGLARDIKNDS 199
Query: 240 QFCEIVGSPY----YMAPE-VLRRNYGPEIDVWSAGVIIYILL-CGVPPFWAETEEGIAH 293
+ + G+ +MAPE + Y E DVWS G+ ++ L G P+ + +
Sbjct: 200 NYV-VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 258
Query: 294 AIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE 337
+I K F E +++K D +P R T +++++
Sbjct: 259 KMI--KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 50/74 (67%)
Query: 380 NLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGL 439
++ D ++K+ F + D D+NG ++ EL+ + +G+K++D +V+ +++ AD+DG+G
Sbjct: 2 HMDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQ 61
Query: 440 LSCDEFVTMSVHLK 453
++ +EFV M + ++
Sbjct: 62 VNYEEFVKMMMTVR 75
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 99/235 (42%), Gaps = 32/235 (13%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEI------------DIDDVR 129
+Y ++LG G F ++ A K + +K+ TE D D+ +
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTK 79
Query: 130 REVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERA-----A 184
+ H+ K + +K + +++VM GE ++ K Y R
Sbjct: 80 EDSMGANHILKLLDHFNHK----GPNGVHVVMVFEVLGENLLALIKK--YEHRGIPLIYV 133
Query: 185 AAVGKTILRIVKVCHEN-GVMHRDLKPENFL--FADGSENS-QLKAIDFGLSIFFKPGEQ 240
+ K +L + H G++H D+KPEN L D EN Q+K D G + ++ E
Sbjct: 134 KQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD--EH 191
Query: 241 FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHA 294
+ + + Y +PEVL +G D+WS +I+ L+ G F E +EG ++
Sbjct: 192 YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITG--DFLFEPDEGHSYT 244
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 99/235 (42%), Gaps = 32/235 (13%)
Query: 82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEI------------DIDDVR 129
+Y ++LG G F ++ A K + +K+ TE D D+ +
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTK 79
Query: 130 REVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERA-----A 184
+ H+ K + +K + +++VM GE ++ K Y R
Sbjct: 80 EDSMGANHILKLLDHFNHK----GPNGVHVVMVFEVLGENLLALIKK--YEHRGIPLIYV 133
Query: 185 AAVGKTILRIVKVCHEN-GVMHRDLKPENFL--FADGSENS-QLKAIDFGLSIFFKPGEQ 240
+ K +L + H G++H D+KPEN L D EN Q+K D G + ++ E
Sbjct: 134 KQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD--EH 191
Query: 241 FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHA 294
+ + + Y +PEVL +G D+WS +I+ L+ G F E +EG ++
Sbjct: 192 YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITG--DFLFEPDEGHSYT 244
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 112/284 (39%), Gaps = 33/284 (11%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD---VRREVEIMRH 137
++ +FGK LG G FG + ++ A +A + LK + + + E++++ +
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAV-------- 187
L H NIV A ++ E C G+L + + K + + A+
Sbjct: 99 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 158
Query: 188 --------GKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
+ + + +HRDL N L G K DFGL+ K
Sbjct: 159 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT---KICDFGLARDIKNDS 215
Query: 240 QFCEIVGSPY----YMAPE-VLRRNYGPEIDVWSAGVIIYILL-CGVPPFWAETEEGIAH 293
+ + G+ +MAPE + Y E DVWS G+ ++ L G P+ + +
Sbjct: 216 NYV-VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 274
Query: 294 AIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE 337
+I K F E +++K D +P R T +++++
Sbjct: 275 KMI--KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 316
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 6/150 (4%)
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
+ P++V + E +Y+ L G +L + +G A A+ + I + H
Sbjct: 92 QEPHVVPIHDFGEIDGQLYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQIGSALDAAH 151
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE--QFCEIVGSPYYMAPEVLR 257
G HRD+KPEN L S + +DFG++ + Q VG+ YY APE
Sbjct: 152 AAGATHRDVKPENILV---SADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFS 208
Query: 258 RNYGP-EIDVWSAGVIIYILLCGVPPFWAE 286
++ D+++ ++Y L G PP+ +
Sbjct: 209 ESHATYRADIYALTCVLYECLTGSPPYQGD 238
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 49.3 bits (116), Expect = 6e-06, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 47/69 (68%)
Query: 380 NLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGL 439
++P+D++ +I++ F + D D NG ++ +EL + +G ++ +++++++ D+DG+G
Sbjct: 29 DIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQ 88
Query: 440 LSCDEFVTM 448
+ +EFVT+
Sbjct: 89 VDFEEFVTL 97
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
L ++Q +IK+ F + DT+K G + + ELK + +G V P++ LM D +GNG +
Sbjct: 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYI 60
Query: 441 SCDEFVTMSVHLKRIGNDD 459
D+F + + ++I N D
Sbjct: 61 GFDDF--LDIMTEKIKNRD 77
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 112/284 (39%), Gaps = 33/284 (11%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD---VRREVEIMRH 137
++ +FGK LG G FG + ++ A +A + LK + + + E++++ +
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAV-------- 187
L H NIV A ++ E C G+L + + K + + A+
Sbjct: 101 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 160
Query: 188 --------GKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
+ + + +HRDL N L G K DFGL+ K
Sbjct: 161 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT---KICDFGLARDIKNDS 217
Query: 240 QFCEIVGSPY----YMAPE-VLRRNYGPEIDVWSAGVIIYILL-CGVPPFWAETEEGIAH 293
+ + G+ +MAPE + Y E DVWS G+ ++ L G P+ + +
Sbjct: 218 NYV-VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 276
Query: 294 AIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE 337
+I K F E +++K D +P R T +++++
Sbjct: 277 KMI--KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 318
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 112/284 (39%), Gaps = 33/284 (11%)
Query: 81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD---VRREVEIMRH 137
++ +FGK LG G FG + ++ A +A + LK + + + E++++ +
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAV-------- 187
L H NIV A ++ E C G+L + + K + + A+
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 188 --------GKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
+ + + +HRDL N L G K DFGL+ K
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT---KICDFGLARDIKNDS 222
Query: 240 QFCEIVGSPY----YMAPE-VLRRNYGPEIDVWSAGVIIYILL-CGVPPFWAETEEGIAH 293
+ + G+ +MAPE + Y E DVWS G+ ++ L G P+ + +
Sbjct: 223 NYV-VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 281
Query: 294 AIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE 337
+I K F E +++K D +P R T +++++
Sbjct: 282 KMI--KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 43/70 (61%)
Query: 379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNG 438
D L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 439 LLSCDEFVTM 448
+ EF+TM
Sbjct: 62 TIDFPEFLTM 71
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 111/265 (41%), Gaps = 30/265 (11%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKT-EIDIDDVRREVEIMRHLPKHPNIV 145
+ LG G+FG E+ G K+A + LK + D E +M+ L +H +V
Sbjct: 25 ERLGAGQFG------EVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLV 77
Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENGV 203
A ++ IY++ E E G L D + T + I + E
Sbjct: 78 RLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 136
Query: 204 MHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRRNY 260
+HRDL+ N L +D K DFGL+ + E + G+ + + APE + NY
Sbjct: 137 IHRDLRAANILVSD---TLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAI--NY 190
Query: 261 GP---EIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
G + DVWS G+++ I+ G P+ T + + RG D P +E +
Sbjct: 191 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP---EELYQ 247
Query: 317 LVKNMLDPNPYNRLT---LEEVLEN 338
L++ P +R T L VLE+
Sbjct: 248 LMRLCWKERPEDRPTFDYLRSVLED 272
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 111/265 (41%), Gaps = 30/265 (11%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKT-EIDIDDVRREVEIMRHLPKHPNIV 145
+ LG G+FG E+ G K+A + LK + D E +M+ L +H +V
Sbjct: 29 ERLGAGQFG------EVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLV 81
Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENGV 203
A ++ IY++ E E G L D + T + I + E
Sbjct: 82 RLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 140
Query: 204 MHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRRNY 260
+HRDL+ N L +D K DFGL+ + E + G+ + + APE + NY
Sbjct: 141 IHRDLRAANILVSD---TLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAI--NY 194
Query: 261 GP---EIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
G + DVWS G+++ I+ G P+ T + + RG D P +E +
Sbjct: 195 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP---EELYQ 251
Query: 317 LVKNMLDPNPYNRLT---LEEVLEN 338
L++ P +R T L VLE+
Sbjct: 252 LMRLCWKERPEDRPTFDYLRSVLED 276
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 111/265 (41%), Gaps = 30/265 (11%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKT-EIDIDDVRREVEIMRHLPKHPNIV 145
+ LG G+FG E+ G K+A + LK + D E +M+ L +H +V
Sbjct: 14 ERLGAGQFG------EVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLV 66
Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENGV 203
A ++ IY++ E E G L D + T + I + E
Sbjct: 67 RLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 125
Query: 204 MHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRRNY 260
+HRDL+ N L +D K DFGL+ + E + G+ + + APE + NY
Sbjct: 126 IHRDLRAANILVSD---TLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAI--NY 179
Query: 261 GP---EIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
G + DVWS G+++ I+ G P+ T + + RG D P +E +
Sbjct: 180 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP---EELYQ 236
Query: 317 LVKNMLDPNPYNRLT---LEEVLEN 338
L++ P +R T L VLE+
Sbjct: 237 LMRLCWKERPEDRPTFDYLRSVLED 261
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 22/194 (11%)
Query: 105 TGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELC 164
TGE ++I E E+ + ++ E+ + + L HPNIV Y+ + + +++V
Sbjct: 51 TGEYVTVRRINLEACSNEM-VTFLQGELHVSK-LFNHPNIVPYRATFIADNELWVVTSFM 108
Query: 165 EGGELFDRIVNKGHY----TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFA-DGS 219
G D I H+ E A A + + +L+ + H G +HR +K + L + DG
Sbjct: 109 AYGSAKDLICT--HFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDG- 165
Query: 220 ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY-------MAPEVLRRN---YGPEIDVWSA 269
L + LS+ G++ + P Y ++PEVL++N Y + D++S
Sbjct: 166 -KVYLSGLRSNLSM-ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSV 223
Query: 270 GVIIYILLCGVPPF 283
G+ L G PF
Sbjct: 224 GITACELANGHVPF 237
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 94/222 (42%), Gaps = 23/222 (10%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKT-EIDIDDVRREVEIMRHLPKHPNIV 145
K LG G+FG E+ G K+A + LK + + E +M+ L +H +V
Sbjct: 19 KRLGAGQFG------EVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTL-QHDKLV 71
Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGV 203
++ IY++ E G L D + + G I +
Sbjct: 72 RLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY 131
Query: 204 MHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRRNY 260
+HRDL+ N L SE+ K DFGL+ + E + G+ + + APE + N+
Sbjct: 132 IHRDLRAANVLV---SESLMCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPEAI--NF 185
Query: 261 GP---EIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
G + DVWS G+++Y I+ G P+ T + A+ +G
Sbjct: 186 GCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQG 227
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 111/265 (41%), Gaps = 30/265 (11%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKT-EIDIDDVRREVEIMRHLPKHPNIV 145
+ LG G+FG E+ G K+A + LK + D E +M+ L +H +V
Sbjct: 24 ERLGAGQFG------EVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLV 76
Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENGV 203
A ++ IY++ E E G L D + T + I + E
Sbjct: 77 RLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 135
Query: 204 MHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRRNY 260
+HRDL+ N L +D K DFGL+ + E + G+ + + APE + NY
Sbjct: 136 IHRDLRAANILVSD---TLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAI--NY 189
Query: 261 GP---EIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
G + DVWS G+++ I+ G P+ T + + RG D P +E +
Sbjct: 190 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP---EELYQ 246
Query: 317 LVKNMLDPNPYNRLT---LEEVLEN 338
L++ P +R T L VLE+
Sbjct: 247 LMRLCWKERPEDRPTFDYLRSVLED 271
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 107/260 (41%), Gaps = 44/260 (16%)
Query: 62 SISFQLRSVVSNPAEGNILDKYTFGKELGRGEFG--ITHQCFEIE--TGETYACKKIAKE 117
S+S ++ +P GK LG GEFG + F ++ G T K+ KE
Sbjct: 4 SLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE 63
Query: 118 KLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELF-----DR 172
+ ++ D+ E +++ + HP+++ A + L++E + G L R
Sbjct: 64 N-ASPSELRDLLSEFNVLKQV-NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESR 121
Query: 173 IVNKG--------------HYTERAAA-----AVGKTILRIVKVCHENGVMHRDLKPENF 213
V G H ERA + I + ++ E ++HRDL N
Sbjct: 122 KVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNI 181
Query: 214 LFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRRN-YGPEIDVWSA 269
L A+G ++K DFGLS + + + +MA E L + Y + DVWS
Sbjct: 182 LVAEG---RKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSF 238
Query: 270 GVIIYILLC-------GVPP 282
GV+++ ++ G+PP
Sbjct: 239 GVLLWEIVTLGGNPYPGIPP 258
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 22/194 (11%)
Query: 105 TGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELC 164
TGE ++I E E+ + ++ E+ + + L HPNIV Y+ + + +++V
Sbjct: 35 TGEYVTVRRINLEACSNEM-VTFLQGELHVSK-LFNHPNIVPYRATFIADNELWVVTSFM 92
Query: 165 EGGELFDRIVNKGHY----TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFA-DGS 219
G D I H+ E A A + + +L+ + H G +HR +K + L + DG
Sbjct: 93 AYGSAKDLICT--HFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDG- 149
Query: 220 ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY-------MAPEVLRRN---YGPEIDVWSA 269
L + LS+ G++ + P Y ++PEVL++N Y + D++S
Sbjct: 150 -KVYLSGLRSNLSM-ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSV 207
Query: 270 GVIIYILLCGVPPF 283
G+ L G PF
Sbjct: 208 GITACELANGHVPF 221
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 44/71 (61%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
AD L ++Q+A+ K+ F + D D +G +T +EL + +GQ ++ +++ ++ D DG+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 60
Query: 438 GLLSCDEFVTM 448
G + EF+TM
Sbjct: 61 GTIDFPEFLTM 71
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
L ++Q+A+ K F D + G + EL + +GQ ++ +++ L+ A+ + NG L
Sbjct: 4 LTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQL 63
Query: 441 SCDEFV-TMSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
+ EF M+ ++ ++ + +AF+ FD++ GFI
Sbjct: 64 NFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFI 100
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 42/65 (64%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
D ++++ F + D D +G ++ EL+ + +G+KV+D ++ ++ AD DG+G+++ +
Sbjct: 80 DTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYE 139
Query: 444 EFVTM 448
EFV M
Sbjct: 140 EFVWM 144
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 96/248 (38%), Gaps = 44/248 (17%)
Query: 80 LDKYTFGKELGRGEFGITHQ--CFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
L F +ELG FG ++ F GE I K K E + + R ++R
Sbjct: 25 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRA 84
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI---LRI 194
+HPN+V + ++ C G+L + +V + +++ + +T+ L
Sbjct: 85 RLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEP 144
Query: 195 VKVCH-------------ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQF 241
H + V+H+DL N L D +K D GL F
Sbjct: 145 PDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYD---KLNVKISDLGL---------F 192
Query: 242 CEIVGSPYY------------MAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPFWAET 287
E+ + YY MAPE ++ + + D+WS GV+++ + G+ P+ +
Sbjct: 193 REVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS 252
Query: 288 EEGIAHAI 295
+ + I
Sbjct: 253 NQDVVEMI 260
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 64/122 (52%), Gaps = 2/122 (1%)
Query: 355 NVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLN 414
+V K +++M +F+K + ++A + ++K F +D + G++T +L+ GL
Sbjct: 23 HVLENFKNYALMLRFQKLAMTIIAQQSNDYDVQKLKAAFLHLDEEGKGNITKLQLRKGLE 82
Query: 415 MIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSG 474
G + P+ +L++ D DG+G + EF+ ++ +++ ++ AFR FD + G
Sbjct: 83 RSGLMLP-PNFDLLLDQIDSDGSGNIDYTEFLAAAIDRRQLSK-KLIYCAFRVFDVDNDG 140
Query: 475 FI 476
I
Sbjct: 141 EI 142
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
D +I++ F + D D NG ++ EL+ + +G+K++D +V ++ AD+DG+G ++ +
Sbjct: 2 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 444 EFVTM 448
EFV M
Sbjct: 62 EFVQM 66
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 111/265 (41%), Gaps = 30/265 (11%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKT-EIDIDDVRREVEIMRHLPKHPNIV 145
+ LG G+FG E+ G K+A + LK + D E +M+ L +H +V
Sbjct: 19 ERLGAGQFG------EVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLV 71
Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENGV 203
A ++ IY++ E E G L D + T + I + E
Sbjct: 72 RLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 130
Query: 204 MHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRRNY 260
+HRDL+ N L +D K DFGL+ + E + G+ + + APE + NY
Sbjct: 131 IHRDLRAANILVSD---TLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAI--NY 184
Query: 261 GP---EIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
G + DVWS G+++ I+ G P+ T + + RG D P +E +
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP---EELYQ 241
Query: 317 LVKNMLDPNPYNRLT---LEEVLEN 338
L++ P +R T L VLE+
Sbjct: 242 LMRLCWKERPEDRPTFDYLRSVLED 266
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 17/196 (8%)
Query: 88 ELGRGEFGITHQ-CFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
ELG G FG Q + + + K+ K+ + + D +++ RE +IM L +P IV
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE-KADTEEMMREAQIMHQL-DNPYIVR 400
Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI---VKVCHENGV 203
+ +A+ LVME+ GG L +V K E + V + + ++ +K E
Sbjct: 401 LIGVCQ-AEALMLVMEMAGGGPLHKFLVGKRE--EIPVSNVAELLHQVSMGMKYLEEKNF 457
Query: 204 MHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS---PY-YMAPEVLR-R 258
+HR+L N L + K DFGLS + + + P + APE + R
Sbjct: 458 VHRNLAARNVLLVN---RHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR 514
Query: 259 NYGPEIDVWSAGVIIY 274
+ DVWS GV ++
Sbjct: 515 KFSSRSDVWSYGVTMW 530
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 57/98 (58%), Gaps = 3/98 (3%)
Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
L ++Q +I++ F + DTD +G + +ELK + +G + ++K ++ D DG+G +
Sbjct: 2 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTI 61
Query: 441 SCDEFVTMSVHL--KRIGNDDILSQAFRFFDKNQSGFI 476
+EF+ M +R ++I+ +AFR FD +++G I
Sbjct: 62 DFEEFLQMMTAKMGERDSREEIM-KAFRLFDDDETGKI 98
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 40/64 (62%)
Query: 382 PQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLS 441
+D +I + F + D D+ G ++F+ LK +G+ ++D +++ +++ AD DG+G ++
Sbjct: 76 ERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMIDEADRDGDGEVN 135
Query: 442 CDEF 445
+EF
Sbjct: 136 EEEF 139
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 104/279 (37%), Gaps = 56/279 (20%)
Query: 89 LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH-LPKHPNIVTY 147
+G+G +G + + GE+ A K + D RE EI L +H NI+ +
Sbjct: 16 VGKGRYGEVWR--GLWHGESVAVKIFSSR------DEQSWFRETEIYNTVLLRHDNILGF 67
Query: 148 ----KEAYEDKDAIYLVMELCEGGELFD---RIVNKGHYTER----AAAAVGKTILRIVK 196
+ ++L+ E G L+D R + H R AA + + I
Sbjct: 68 IASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFG 127
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI-----VGSPYYM 251
+ + HRD K N L N Q D GL++ G + +I VG+ YM
Sbjct: 128 TQGKPAIAHRDFKSRNVLV---KSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYM 184
Query: 252 APEVLRRNYGPEI-------DVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFER 304
APEVL + D+W+ G++++ E I+ G ++ R
Sbjct: 185 APEVLDEQIRTDCFESYKWTDIWAFGLVLW--------------EIARRTIVNGIVEDYR 230
Query: 305 DPW-------PKVSKEAKELVKNMLDPNPYNRLTLEEVL 336
P+ P K + + P NRL + VL
Sbjct: 231 PPFYDVVPNDPSFEDMKKVVCVDQQTPTIPNRLAADPVL 269
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 76/186 (40%), Gaps = 13/186 (6%)
Query: 121 TEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGEL--FDRIVNKGH 178
TE D E IM HPNI+ + +V E E G L F R + G
Sbjct: 90 TERQRRDFLSEASIMGQF-DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR-THDGQ 147
Query: 179 YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-- 236
+T + + + ++ + G +HRDL N L N K DFGLS +
Sbjct: 148 FTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLV---DSNLVCKVSDFGLSRVLEDD 204
Query: 237 PGEQFCEIVGS-PY-YMAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIA 292
P G P + APE + R + DVWS GV+++ +L G P+W T +
Sbjct: 205 PDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVI 264
Query: 293 HAIIRG 298
++ G
Sbjct: 265 SSVEEG 270
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
D +I++ F + D D NG ++ EL+ + +G+K++D +V ++ AD+DG+G ++ +
Sbjct: 2 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 444 EFVTM 448
EFV M
Sbjct: 62 EFVQM 66
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
D +I++ F + D D NG ++ EL+ + +G+K++D +V ++ AD+DG+G ++ +
Sbjct: 3 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 62
Query: 444 EFVTM 448
EFV M
Sbjct: 63 EFVQM 67
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 48/70 (68%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
D ++K+ F + D D+NG ++ EL+ + +G+K++D +V+ +++ AD+DG+G ++ +
Sbjct: 1 DAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 60
Query: 444 EFVTMSVHLK 453
EFV M + ++
Sbjct: 61 EFVKMMMTVR 70
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 108/260 (41%), Gaps = 44/260 (16%)
Query: 62 SISFQLRSVVSNPAEGNILDKYTFGKELGRGEFG--ITHQCFEIE--TGETYACKKIAKE 117
S+S ++ +P GK LG GEFG + F ++ G T K+ KE
Sbjct: 4 SLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE 63
Query: 118 KLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELF-----DR 172
+ ++ D+ E +++ + HP+++ A + L++E + G L R
Sbjct: 64 N-ASPSELRDLLSEFNVLKQV-NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESR 121
Query: 173 IVNKG--------------HYTERAAA-----AVGKTILRIVKVCHENGVMHRDLKPENF 213
V G H ERA + I + ++ E ++HRDL N
Sbjct: 122 KVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNI 181
Query: 214 LFADGSENSQLKAIDFGLSI-FFKPGEQFCEIVGS-PY-YMAPEVLRRN-YGPEIDVWSA 269
L A+G ++K DFGLS ++ G P +MA E L + Y + DVWS
Sbjct: 182 LVAEG---RKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSF 238
Query: 270 GVIIYILLC-------GVPP 282
GV+++ ++ G+PP
Sbjct: 239 GVLLWEIVTLGGNPYPGIPP 258
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 41/61 (67%)
Query: 388 QIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVT 447
+I++ F + D D NG ++ EL+ + +G+K++D +V ++ AD+DG+G ++ +EFV
Sbjct: 3 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 62
Query: 448 M 448
M
Sbjct: 63 M 63
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 110/265 (41%), Gaps = 30/265 (11%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKT-EIDIDDVRREVEIMRHLPKHPNIV 145
+ LG G+FG E+ G K+A + LK + D E +M+ L +H +V
Sbjct: 27 ERLGAGQFG------EVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLV 79
Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENGV 203
A ++ IY++ E E G L D + T + I + E
Sbjct: 80 RLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 138
Query: 204 MHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRRNY 260
+HRDL+ N L +D K DFGL+ + E G+ + + APE + NY
Sbjct: 139 IHRDLRAANILVSD---TLSCKIADFGLARLIEDNEXTAR-EGAKFPIKWTAPEAI--NY 192
Query: 261 GP---EIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
G + DVWS G+++ I+ G P+ T + + RG D P +E +
Sbjct: 193 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP---EELYQ 249
Query: 317 LVKNMLDPNPYNRLT---LEEVLEN 338
L++ P +R T L VLE+
Sbjct: 250 LMRLCWKERPEDRPTFDYLRSVLED 274
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
D +I++ F + D D NG ++ EL+ + +G+K++D +V ++ AD+DG+G ++ +
Sbjct: 6 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 65
Query: 444 EFVTM 448
EFV M
Sbjct: 66 EFVQM 70
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 110/265 (41%), Gaps = 30/265 (11%)
Query: 87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKT-EIDIDDVRREVEIMRHLPKHPNIV 145
+ LG G+FG E+ G K+A + LK + D E +M+ L +H +V
Sbjct: 25 ERLGAGQFG------EVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLV 77
Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENGV 203
A ++ IY++ E E G L D + T + I + E
Sbjct: 78 RLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 136
Query: 204 MHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRRNY 260
+HRDL+ N L +D K DFGL+ + E G+ + + APE + NY
Sbjct: 137 IHRDLRAANILVSD---TLSCKIADFGLARLIEDNEXTAR-EGAKFPIKWTAPEAI--NY 190
Query: 261 GP---EIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
G + DVWS G+++ I+ G P+ T + + RG D P +E +
Sbjct: 191 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP---EELYQ 247
Query: 317 LVKNMLDPNPYNRLT---LEEVLEN 338
L++ P +R T L VLE+
Sbjct: 248 LMRLCWKERPEDRPTFDYLRSVLED 272
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
D +I++ F + D D NG ++ EL+ + +G+K++D +V ++ AD+DG+G ++ +
Sbjct: 5 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 64
Query: 444 EFVTM 448
EFV M
Sbjct: 65 EFVQM 69
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.134 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,310,246
Number of Sequences: 62578
Number of extensions: 673775
Number of successful extensions: 5407
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 380
Number of HSP's that attempted gapping in prelim test: 1907
Number of HSP's gapped (non-prelim): 1601
length of query: 586
length of database: 14,973,337
effective HSP length: 104
effective length of query: 482
effective length of database: 8,465,225
effective search space: 4080238450
effective search space used: 4080238450
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)