Query 043830
Match_columns 248
No_of_seqs 164 out of 1381
Neff 9.2
Searched_HMMs 13730
Date Mon Mar 25 14:57:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043830.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/043830hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2iw1a1 c.87.1.8 (A:2-371) Lip 99.9 4.7E-27 3.5E-31 199.4 19.7 217 2-239 144-368 (370)
2 d2bisa1 c.87.1.8 (A:1-437) Gly 99.9 6.6E-23 4.8E-27 178.3 17.8 213 10-244 204-431 (437)
3 d1rzua_ c.87.1.8 (A:) Glycogen 99.9 6.3E-22 4.6E-26 175.4 16.9 173 49-243 290-477 (477)
4 d2bfwa1 c.87.1.8 (A:218-413) G 99.9 4.6E-21 3.3E-25 150.6 17.0 169 39-226 19-195 (196)
5 d2f9fa1 c.87.1.8 (A:2-167) Fir 99.7 7E-18 5.1E-22 128.7 12.9 146 49-220 12-164 (166)
6 d1uqta_ c.87.1.6 (A:) Trehalos 99.7 1.5E-16 1.1E-20 139.8 17.6 187 40-241 244-453 (456)
7 d1f0ka_ c.87.1.2 (A:) Peptidog 98.9 1.7E-08 1.2E-12 83.6 15.2 112 122-244 234-350 (351)
8 d1v4va_ c.87.1.3 (A:) UDP-N-ac 98.8 2.3E-08 1.7E-12 84.7 14.1 204 1-243 151-363 (373)
9 d1rrva_ c.87.1.5 (A:) TDP-vanc 98.7 2.5E-07 1.8E-11 77.5 16.2 113 119-243 286-400 (401)
10 d1pn3a_ c.87.1.5 (A:) TDP-epi- 98.6 3E-08 2.2E-12 83.0 8.2 114 120-245 271-390 (391)
11 d1iira_ c.87.1.5 (A:) UDP-gluc 98.6 8.8E-08 6.4E-12 80.0 10.9 83 119-208 285-369 (401)
12 d1f6da_ c.87.1.3 (A:) UDP-N-ac 98.6 1.2E-06 8.4E-11 74.0 16.1 207 1-240 149-371 (376)
13 d1o6ca_ c.87.1.3 (A:) UDP-N-ac 98.5 3.3E-07 2.4E-11 77.5 11.8 208 1-243 151-367 (377)
14 d2pq6a1 c.87.1.10 (A:8-480) (I 98.0 2.2E-05 1.6E-09 66.5 10.9 95 120-222 347-445 (473)
15 d2vcha1 c.87.1.10 (A:6-476) Hy 97.8 8.4E-05 6.1E-09 62.8 11.9 85 119-210 334-426 (471)
16 d2c1xa1 c.87.1.10 (A:7-456) UD 97.8 7.7E-05 5.6E-09 62.9 10.7 85 120-211 320-409 (450)
17 d2acva1 c.87.1.10 (A:3-463) Tr 97.6 0.00011 8E-09 61.8 9.1 76 133-214 345-430 (461)
18 d1w25a1 c.23.1.1 (A:2-140) Res 93.1 0.83 6.1E-05 31.2 12.7 112 80-207 2-120 (139)
19 d1rcua_ c.129.1.1 (A:) Hypothe 90.7 1.3 9.2E-05 31.6 9.9 75 128-205 88-170 (170)
20 d1dbwa_ c.23.1.1 (A:) Transcri 90.3 1.6 0.00012 29.0 10.2 113 79-207 3-120 (123)
21 d1jbea_ c.23.1.1 (A:) CheY pro 90.2 1.7 0.00012 29.0 10.1 114 78-207 3-124 (128)
22 d1p6qa_ c.23.1.1 (A:) CheY pro 89.1 1.9 0.00014 28.9 9.4 113 80-207 7-126 (129)
23 d1i3ca_ c.23.1.1 (A:) Response 88.3 2.7 0.00019 28.7 11.1 67 138-206 58-130 (144)
24 d1k68a_ c.23.1.1 (A:) Response 86.0 3.6 0.00026 27.8 10.0 67 138-206 57-129 (140)
25 d1k66a_ c.23.1.1 (A:) Response 85.7 3.9 0.00028 27.9 9.9 69 137-207 63-137 (149)
26 d1pswa_ c.87.1.7 (A:) ADP-hept 85.3 0.84 6.1E-05 35.8 6.5 84 63-167 199-285 (348)
27 d1ny5a1 c.23.1.1 (A:1-137) Tra 85.3 3.9 0.00028 27.5 11.3 112 81-208 2-118 (137)
28 d2pl1a1 c.23.1.1 (A:1-119) Pho 85.2 3.5 0.00026 27.0 10.2 69 137-206 45-116 (119)
29 d1qkka_ c.23.1.1 (A:) Transcri 84.2 4.4 0.00032 27.3 10.1 58 150-208 57-118 (140)
30 d1zpda1 c.31.1.3 (A:188-362) P 83.7 2.7 0.0002 29.7 8.2 81 64-145 9-98 (175)
31 d2a9pa1 c.23.1.1 (A:2-118) DNA 83.1 4.3 0.00031 26.4 10.3 69 137-206 45-115 (117)
32 d1krwa_ c.23.1.1 (A:) NTRC rec 83.1 4.1 0.0003 26.8 8.4 69 137-207 48-120 (123)
33 d1kgsa2 c.23.1.1 (A:2-123) Pho 82.9 2.4 0.00017 28.0 7.1 111 79-206 1-117 (122)
34 d1peya_ c.23.1.1 (A:) Sporulat 82.6 4.6 0.00034 26.3 9.2 68 137-206 46-117 (119)
35 d1s8na_ c.23.1.1 (A:) Probable 81.6 6.7 0.00049 27.7 9.8 71 137-209 49-122 (190)
36 d1ovma1 c.31.1.3 (A:181-341) I 81.1 3.1 0.00022 28.9 7.5 81 63-145 15-105 (161)
37 d1p2fa2 c.23.1.1 (A:1-120) Res 79.8 5.2 0.00038 26.1 8.0 70 137-207 44-116 (120)
38 d2ihta1 c.31.1.3 (A:198-374) C 78.8 1.5 0.00011 31.2 5.1 117 82-207 23-154 (177)
39 d1pvda1 c.31.1.3 (A:182-360) P 78.5 4.1 0.0003 28.8 7.5 65 82-146 34-107 (179)
40 d1qo0d_ c.23.1.3 (D:) Positive 78.4 8.7 0.00063 26.9 9.5 114 78-209 10-125 (189)
41 d1t35a_ c.129.1.1 (A:) Hypothe 77.8 9.4 0.00068 26.9 10.6 79 122-203 82-177 (179)
42 d2ayxa1 c.23.1.1 (A:817-949) S 77.2 7.8 0.00057 25.7 9.7 112 78-206 7-124 (133)
43 d1w25a2 c.23.1.1 (A:141-293) R 76.8 8.9 0.00064 26.2 8.9 56 151-207 69-130 (153)
44 d1a04a2 c.23.1.1 (A:5-142) Nit 76.5 8.3 0.0006 25.7 10.5 70 137-207 49-121 (138)
45 d2ez9a1 c.31.1.3 (A:183-365) P 75.7 11 0.00079 26.6 10.7 117 82-208 34-157 (183)
46 d1yioa2 c.23.1.1 (A:3-130) Res 75.5 3.5 0.00026 27.3 6.1 24 188-211 100-123 (128)
47 d1mb3a_ c.23.1.1 (A:) Cell div 74.6 8.6 0.00063 24.9 8.4 69 137-207 46-120 (123)
48 d2jfga1 c.5.1.1 (A:1-93) UDP-N 72.7 8 0.00058 23.8 7.0 33 132-166 60-92 (93)
49 d1dcfa_ c.23.1.2 (A:) Receiver 72.2 11 0.00078 25.0 9.9 112 79-207 7-128 (134)
50 d1t9ba1 c.31.1.3 (A:290-460) A 71.8 13 0.00094 25.7 9.2 65 82-146 14-87 (171)
51 d2r25b1 c.23.1.1 (B:1087-1214) 71.0 11 0.00082 24.7 9.5 69 137-207 52-125 (128)
52 d1ozha1 c.31.1.3 (A:188-366) C 70.7 6.2 0.00045 27.8 6.8 116 82-208 24-150 (179)
53 d1zesa1 c.23.1.1 (A:3-123) Pho 70.4 11 0.0008 24.3 10.1 68 137-206 45-118 (121)
54 d1ys7a2 c.23.1.1 (A:7-127) Tra 69.6 4.3 0.00032 26.6 5.3 21 187-207 98-118 (121)
55 d1xhfa1 c.23.1.1 (A:2-122) Aer 68.4 12 0.0009 24.1 10.3 47 161-207 72-118 (121)
56 d1gpja2 c.2.1.7 (A:144-302) Gl 67.1 16 0.0012 25.0 8.4 91 49-167 24-119 (159)
57 d1vi6a_ c.23.15.1 (A:) Ribosom 66.9 1.5 0.00011 32.0 2.5 90 63-167 48-138 (193)
58 d2q4oa1 c.129.1.1 (A:8-190) Hy 66.2 19 0.0014 25.4 11.6 81 120-203 85-182 (183)
59 d2ji7a1 c.31.1.3 (A:195-369) O 64.9 5.2 0.00038 28.1 5.2 115 82-207 23-144 (175)
60 d1q6za1 c.31.1.3 (A:182-341) B 64.1 11 0.00083 25.5 7.0 134 61-207 7-149 (160)
61 d1u0sy_ c.23.1.1 (Y:) CheY pro 61.4 17 0.0012 23.3 9.0 47 159-205 71-117 (118)
62 d1zgza1 c.23.1.1 (A:2-121) Tor 60.8 17 0.0013 23.2 10.4 110 81-206 3-116 (120)
63 d2djia1 c.31.1.3 (A:187-363) P 59.6 14 0.001 25.6 6.8 116 82-207 25-147 (177)
64 d2uubb1 c.23.15.1 (B:7-240) Ri 52.7 30 0.0022 25.4 7.8 28 137-167 153-180 (234)
65 d2nu7a2 c.23.4.1 (A:122-287) S 50.8 11 0.00077 26.3 4.7 23 181-206 144-166 (166)
66 d2nzwa1 c.87.1.11 (A:1-349) Al 50.8 8.1 0.00059 30.6 4.5 109 129-245 224-342 (349)
67 d1ybha1 c.31.1.3 (A:281-459) A 50.7 31 0.0023 23.8 7.5 118 82-207 23-147 (179)
68 d2at2a2 c.78.1.1 (A:145-295) A 49.1 13 0.00098 25.3 5.0 14 129-142 52-65 (151)
69 d1o0sa1 c.2.1.7 (A:296-603) Mi 49.1 3.7 0.00027 32.1 2.0 37 130-167 95-135 (308)
70 d1vb5a_ c.124.1.5 (A:) Putativ 48.8 49 0.0036 24.8 10.3 85 66-167 121-215 (274)
71 d1v4va_ c.87.1.3 (A:) UDP-N-ac 48.0 22 0.0016 28.0 6.8 109 51-167 4-117 (373)
72 d1wbha1 c.1.10.1 (A:1-213) KDP 47.4 11 0.00079 27.6 4.4 39 127-167 118-160 (213)
73 d1tlta1 c.2.1.3 (A:5-127,A:268 47.0 36 0.0026 22.8 7.2 73 131-207 56-136 (164)
74 d1zh2a1 c.23.1.1 (A:2-120) Tra 46.7 31 0.0023 21.9 8.8 46 161-206 70-115 (119)
75 d2gy9b1 c.23.15.1 (B:8-225) Ri 46.7 46 0.0033 24.0 8.0 30 136-168 149-178 (218)
76 d1gq2a1 c.2.1.7 (A:280-580) Mi 46.6 15 0.0011 28.3 5.3 30 137-167 104-135 (298)
77 d1mvoa_ c.23.1.1 (A:) PhoP rec 43.1 36 0.0026 21.6 8.6 20 187-206 99-118 (121)
78 d1dz3a_ c.23.1.1 (A:) Sporulat 42.7 37 0.0027 21.6 7.8 69 137-207 48-121 (123)
79 d1ydhb_ c.129.1.1 (B:) Hypothe 41.4 51 0.0037 22.8 11.9 82 120-204 81-179 (181)
80 d1iiba_ c.44.2.1 (A:) Enzyme I 40.4 15 0.0011 23.4 3.7 70 82-168 5-77 (103)
81 d1vhca_ c.1.10.1 (A:) Hypothet 37.2 23 0.0017 25.6 4.9 39 127-167 117-159 (212)
82 d1lu4a_ c.47.1.10 (A:) Soluble 36.0 49 0.0036 21.1 9.4 55 49-105 24-80 (134)
83 d3clsc1 c.26.2.3 (C:1-262) Sma 35.8 78 0.0057 23.4 8.1 98 64-167 40-144 (262)
84 d1h6da1 c.2.1.3 (A:51-212,A:37 34.4 24 0.0018 25.3 4.7 72 76-167 55-129 (221)
85 d1mxsa_ c.1.10.1 (A:) KDPG ald 34.3 22 0.0016 25.8 4.3 19 127-145 120-139 (216)
86 d2nx2a1 c.129.1.2 (A:1-177) Hy 34.1 30 0.0022 24.2 4.9 33 53-85 45-77 (177)
87 d1p3da1 c.5.1.1 (A:11-106) UDP 34.0 35 0.0026 21.0 4.8 30 134-166 65-95 (96)
88 d2b4aa1 c.23.1.1 (A:2-119) Hyp 32.5 26 0.0019 22.4 4.1 105 80-204 3-114 (118)
89 d2hqsc1 d.79.7.1 (C:68-173) Pe 32.1 12 0.00085 23.6 2.2 23 2-24 60-82 (106)
90 d1kjqa2 c.30.1.1 (A:2-112) Gly 32.0 50 0.0036 20.8 5.5 26 81-107 13-38 (111)
91 d1w85i_ a.9.1.1 (I:) E3/E1 bin 27.5 20 0.0015 18.7 2.2 22 1-22 5-26 (42)
92 d1b0aa1 c.2.1.7 (A:123-288) Me 27.0 90 0.0065 21.3 7.4 49 79-142 37-86 (166)
93 d1duvg2 c.78.1.1 (G:151-333) O 26.8 49 0.0036 22.8 5.1 14 129-142 67-80 (183)
94 d1vm6a3 c.2.1.3 (A:1-96,A:183- 26.3 78 0.0057 20.4 6.3 34 135-170 40-73 (128)
95 d1dxha2 c.78.1.1 (A:151-335) O 25.2 77 0.0056 21.8 6.0 14 129-142 67-80 (185)
96 d1f6da_ c.87.1.3 (A:) UDP-N-ac 24.5 80 0.0058 24.5 6.5 55 129-185 77-141 (376)
97 d1tqja_ c.1.2.2 (A:) D-ribulos 23.9 1.2E+02 0.0085 21.6 7.2 70 76-157 82-152 (221)
98 d1v8aa_ c.72.1.2 (A:) Hydroxye 23.8 1.3E+02 0.0094 22.1 10.9 118 64-202 2-128 (264)
99 d2a6qa1 d.306.1.1 (A:10-92) An 23.6 71 0.0052 19.0 5.0 49 160-221 22-70 (83)
100 d1j6ua1 c.5.1.1 (A:0-88) UDP-N 23.6 73 0.0053 19.1 5.9 61 83-166 27-88 (89)
101 d1g57a_ d.115.1.2 (A:) 3,4-dih 23.3 55 0.004 23.4 4.8 41 155-195 15-68 (209)
102 d1vr6a1 c.1.10.4 (A:1-338) 3-d 23.1 1.5E+02 0.011 22.6 9.5 102 49-169 92-208 (338)
103 d1luaa1 c.2.1.7 (A:98-288) Met 23.1 1.1E+02 0.0078 20.8 6.6 77 48-143 22-99 (191)
104 d1pvva2 c.78.1.1 (A:151-313) O 23.0 1E+02 0.0074 20.6 7.2 14 129-142 65-78 (163)
105 d1xeaa1 c.2.1.3 (A:2-122,A:267 22.4 1E+02 0.0074 20.3 7.6 88 75-185 22-113 (167)
106 d1euca2 c.23.4.1 (A:131-306) S 22.2 66 0.0048 22.0 5.0 24 180-206 147-170 (176)
107 d1r1ma_ d.79.7.1 (A:) Outer me 22.0 22 0.0016 23.6 2.2 23 2-24 70-92 (140)
108 d1snna_ d.115.1.2 (A:) 3,4-dih 21.5 59 0.0043 23.4 4.7 44 155-198 6-62 (219)
109 d2aizp1 d.79.7.1 (P:1-134) Pep 21.4 21 0.0016 23.5 2.0 23 2-24 88-110 (134)
110 d1a4ia1 c.2.1.7 (A:127-296) Me 21.4 1.2E+02 0.0086 20.7 7.1 49 79-142 39-88 (170)
111 d1k4ia_ d.115.1.2 (A:) 3,4-dih 20.8 65 0.0048 23.1 4.8 41 155-195 7-60 (216)
112 d1d4oa_ c.31.1.4 (A:) Transhyd 20.6 1.3E+02 0.0091 20.7 7.1 121 66-206 38-174 (177)
113 d1ni5a1 c.26.2.5 (A:0-226) tRN 20.2 97 0.0071 21.8 5.8 60 48-108 12-78 (227)
No 1
>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]}
Probab=99.95 E-value=4.7e-27 Score=199.36 Aligned_cols=217 Identities=14% Similarity=0.129 Sum_probs=160.6
Q ss_pred HHHHHHH-HHcCCCCCCeEEcCCcccccccCCCCCCcccHHHHHHhcC---CCeEEEEeCCC--cchHHHHHHHHHHHHH
Q 043830 2 TLQAIRF-QLLEASPFTINFSGDLKYVHEYDESEGDIGSIEDLKASLA---HRQVWMASSIH--RGEEKVMLAVHKVLMQ 75 (248)
Q Consensus 2 ~~~~~~l-~~~gv~~~kI~v~gn~~~d~~~~~~~~~~~~~~~~r~~~~---~~~v~l~~~~~--~~~~~~ll~a~~~l~~ 75 (248)
+..++.+ ...+++++++.+++|+ +|.+.......+...+.+|..++ +++++++.++. .|+++.+++|+..+.+
T Consensus 144 ~~~~~~~~~~~~~~~~~i~vi~~g-v~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~gr~~~~Kg~~~li~a~~~l~~ 222 (370)
T d2iw1a1 144 DKQIADFQKHYQTEPERFQILPPG-IYPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPE 222 (370)
T ss_dssp HHHHHHHHHHHCCCGGGEEECCCC-CCGGGSGGGSCTTHHHHHHHHTTCCTTCEEEEEECSCTTTTTHHHHHHHHHTSCH
T ss_pred HHHHHHHHHhcCCCcceEEEEEee-cccccccccCchhhhhhhhhccCCCccceEEEEEeccccccchhhhccccccccc
Confidence 3444555 4578999999999985 44432101112234566777664 56777776653 4788999999999887
Q ss_pred hCCCeEEEEecCCCCCHHHHHHHHHhcCCceEEecccCCCCCCccEEEEcChhHHHHHHhhCCEEEEcCccCCCCCCCCH
Q 043830 76 KNPNLVTIIVPRHPQHGKEIAQKLQKEGEVVALRSRHEKLMPRTNVYVVDTLGELRQLYKLTPIAVIGGSFLPGLAGHNI 155 (248)
Q Consensus 76 ~~~~~~lvivG~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~y~~ad~~~v~~s~~e~~gg~~~ 155 (248)
+.++..++++|.++.. ++++++++++++.. ++.+.++..++.++|+.||+ ++.||..|++ |+++
T Consensus 223 ~~~~~~~~ii~g~~~~-~~~~~~~~~~~~~~-------------~v~~~g~~~~~~~~~~~adv-~v~ps~~E~~-~~~~ 286 (370)
T d2iw1a1 223 SLRHNTLLFVVGQDKP-RKFEALAEKLGVRS-------------NVHFFSGRNDVSELMAAADL-LLHPAYQEAA-GIVL 286 (370)
T ss_dssp HHHHTEEEEEESSSCC-HHHHHHHHHHTCGG-------------GEEEESCCSCHHHHHHHCSE-EEECCSCCSS-CHHH
T ss_pred ccccceeeeccccccc-cccccccccccccc-------------cccccccccccccccccccc-cccccccccc-ccee
Confidence 7777777777665555 67888888887753 56667777799999999999 5678888986 8999
Q ss_pred HHHHhhCCcEEECCCCCChHHHHHHHHhcCCceEE-EcCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHHh-chhHHHH
Q 043830 156 SEAAAAGCAVLTGPHIGHYSNMVSAMQRLNPKSVL-QVSGKSELEEALSQLFSDARVLEAQQMAAKQAFCAL-SSGIVAN 233 (248)
Q Consensus 156 lEA~a~G~Pvi~~~~~~~~~~~~~~~~~~g~g~~~-~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 233 (248)
+|||+||+|||+++.+ +.+|.+. +..+|.++ .+.|+++|+++|.+|++|++++++|+++|+++++.+ +....++
T Consensus 287 ~EAma~G~PvI~s~~~-g~~e~i~---~~~~G~l~~~~~d~~~la~~i~~ll~d~~~~~~~~~~ar~~~~~~~~~~~~~~ 362 (370)
T d2iw1a1 287 LEAITAGLPVLTTAVC-GYAHYIA---DANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENARHYADTQDLYSLPEK 362 (370)
T ss_dssp HHHHHHTCCEEEETTS-TTTHHHH---HHTCEEEECSSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSCCSCHHHH
T ss_pred eecccCCeeEEEeCCC-ChHHHhc---CCCceEEEcCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhChhHHHHH
Confidence 9999999999998654 6666554 34455555 458999999999999999999999999999999876 4455555
Q ss_pred HHHHHH
Q 043830 234 VWNLLN 239 (248)
Q Consensus 234 ~l~~~~ 239 (248)
+.++|.
T Consensus 363 ~~~ii~ 368 (370)
T d2iw1a1 363 AADIIT 368 (370)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 555553
No 2
>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}
Probab=99.90 E-value=6.6e-23 Score=178.32 Aligned_cols=213 Identities=13% Similarity=0.110 Sum_probs=152.3
Q ss_pred HcCCCCCCeEEcCCccccccc-CCCCC--C-cccHHHHHHhcC--CCeEEEEeCCC---cchHHHHHHHHHHHHH--hCC
Q 043830 10 LLEASPFTINFSGDLKYVHEY-DESEG--D-IGSIEDLKASLA--HRQVWMASSIH---RGEEKVMLAVHKVLMQ--KNP 78 (248)
Q Consensus 10 ~~gv~~~kI~v~gn~~~d~~~-~~~~~--~-~~~~~~~r~~~~--~~~v~l~~~~~---~~~~~~ll~a~~~l~~--~~~ 78 (248)
.++.++.|+.+++|+ +|... .+... . ......++.+++ +.+++++.|+. +|+.+.+++|+..+.. ..|
T Consensus 204 ~~~~~~~ki~vi~~g-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~~Kg~~~ll~a~~~~~~~~~~~ 282 (437)
T d2bisa1 204 FFRNFEGKITYVFNG-IDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQ 282 (437)
T ss_dssp HHGGGTTTEEECCCC-CCTTTSCGGGCCSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGG
T ss_pred hhccccCceEEEecc-cccccccccccchhhHHHHHhhhhhhhccCCceEEEeecccccchhHHHHHhhhcccccccccc
Confidence 356677899999985 34432 11100 0 112334555554 56666665542 4778899999988743 357
Q ss_pred CeEEEEecCCCCCHHHHHHHHHhcCCceEEecccCCCCCCccEEEEc--ChhHHHHHHhhCCEEEEcCccCCCCCCCCHH
Q 043830 79 NLVTIIVPRHPQHGKEIAQKLQKEGEVVALRSRHEKLMPRTNVYVVD--TLGELRQLYKLTPIAVIGGSFLPGLAGHNIS 156 (248)
Q Consensus 79 ~~~lvivG~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~--~~~~l~~~y~~ad~~~v~~s~~e~~gg~~~l 156 (248)
+++|+|+|.++.......+.+.+. ... .+++.+ +.+++..+|+.||++ +.+|..|++ |++++
T Consensus 283 ~~~lvi~G~~~~~~~~~~~~~~~~-~~~-------------~~~~~~~~~~~~~~~~~~~adi~-v~~s~~e~~-~~~~~ 346 (437)
T d2bisa1 283 EMRFIIIGKGDPELEGWARSLEEK-HGN-------------VKVITEMLSREFVRELYGSVDFV-IIPSYFEPF-GLVAL 346 (437)
T ss_dssp GEEEEEECCBCHHHHHHHHHHHHT-CTT-------------EEEECSCCCHHHHHHHHTTCSEE-EECCSCCSS-CHHHH
T ss_pred cceeeeecccccccccchhhhccc-ccc-------------ceeccccCcHHHHHHHHhhhccc-ccccccccc-chHHH
Confidence 899999999865433333333322 221 223333 346799999999995 567888885 89999
Q ss_pred HHHhhCCcEEECCCCCChHHHHHHHHhcCCceEEEcCCHHHHHHHHHHhhh-CHHHHHHHHHHHHHHHHHh-chhHHHHH
Q 043830 157 EAAAAGCAVLTGPHIGHYSNMVSAMQRLNPKSVLQVSGKSELEEALSQLFS-DARVLEAQQMAAKQAFCAL-SSGIVANV 234 (248)
Q Consensus 157 EA~a~G~Pvi~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 234 (248)
|||+||+|||+++. ++..|++ ++++|+++.+.|+++|+++|.++++ |++.+++|++++++.++++ |+.+++++
T Consensus 347 Eama~G~Pvi~~~~-g~~~e~i----~~~~G~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~a~~~ 421 (437)
T d2bisa1 347 EAMCLGAIPIASAV-GGLRDII----TNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERY 421 (437)
T ss_dssp HHHTTTCEEEEESC-TTHHHHC----CTTTCEEECTTCHHHHHHHHHHHHTTTTSCTHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred HHHHCCCCEEEeCC-CCcHHhE----ECCcEEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 99999999998765 4555543 3456788888999999999999986 7889999999999998888 89999999
Q ss_pred HHHHHHHhhh
Q 043830 235 WNLLNFHVFR 244 (248)
Q Consensus 235 l~~~~~~~~~ 244 (248)
+++|++++..
T Consensus 422 ~~iY~~~i~r 431 (437)
T d2bisa1 422 VKAYTGSIDR 431 (437)
T ss_dssp HHHHHTCSCC
T ss_pred HHHHHHHHHh
Confidence 9999988754
No 3
>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}
Probab=99.87 E-value=6.3e-22 Score=175.40 Aligned_cols=173 Identities=10% Similarity=-0.004 Sum_probs=127.5
Q ss_pred CCeEEEEeCCC--cchHHHHHHHHHHHHHhCCCeEEEEecCCCCCH-HHHHHHHHhcCCceEEecccCCCCCCccEEEEc
Q 043830 49 HRQVWMASSIH--RGEEKVMLAVHKVLMQKNPNLVTIIVPRHPQHG-KEIAQKLQKEGEVVALRSRHEKLMPRTNVYVVD 125 (248)
Q Consensus 49 ~~~v~l~~~~~--~~~~~~ll~a~~~l~~~~~~~~lvivG~~~~~~-~~l~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~ 125 (248)
+.+++++.|+. .|+++.|++|+..+.+. +.+++++|.|+... ..+.+....++ .++.+.+
T Consensus 290 ~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~--~~~l~~~G~G~~~~~~~~~~~~~~~~---------------~~v~~~~ 352 (477)
T d1rzua_ 290 GSPLFCVISRLTWQKGIDLMAEAVDEIVSL--GGRLVVLGAGDVALEGALLAAASRHH---------------GRVGVAI 352 (477)
T ss_dssp SSCEEEEESCBSTTTTHHHHHTTHHHHHHT--TCEEEEEECBCHHHHHHHHHHHHHTT---------------TTEEEEE
T ss_pred CccEEEEEeeeeecCCcHHHHHHHHHHHhh--CCeEEEEecCCchHHHHHHHHHhhcC---------------CeEEEEc
Confidence 45678777654 48899999999998765 57788888876532 23334333332 2333332
Q ss_pred --ChhHHHHHHhhCCEEEEcCccCCCCCCCCHHHHHhhCCcEEECCCCCChHHHHHHH------HhcCCceEEEcCCHHH
Q 043830 126 --TLGELRQLYKLTPIAVIGGSFLPGLAGHNISEAAAAGCAVLTGPHIGHYSNMVSAM------QRLNPKSVLQVSGKSE 197 (248)
Q Consensus 126 --~~~~l~~~y~~ad~~~v~~s~~e~~gg~~~lEA~a~G~Pvi~~~~~~~~~~~~~~~------~~~g~g~~~~~~~~~~ 197 (248)
...++..+|+.||+ ||.||..|+| |++++||||||+|||+++. ++.+|.+.+. ...++|+.+.+.|+++
T Consensus 353 ~~~~~~~~~~~~~aD~-~v~PS~~E~f-glv~lEAma~G~PvVas~~-GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~~~ 429 (477)
T d1rzua_ 353 GYNEPLSHLMQAGCDA-IIIPSRFEPC-GLTQLYALRYGCIPVVART-GGLADTVIDANHAALASKAATGVQFSPVTLDG 429 (477)
T ss_dssp SCCHHHHHHHHHHCSE-EEECCSCCSS-CSHHHHHHHHTCEEEEESS-HHHHHHCCBCCHHHHHTTCCCBEEESSCSHHH
T ss_pred ccChhHHHHHHHhCcc-ccCCccccCC-CHHHHHHHHcCCCEEEcCC-CCCcceeecCCccccccCCCceEEeCCCCHHH
Confidence 23467789999999 5678989996 9999999999999999754 3555543211 1234678899999999
Q ss_pred HHHHHHHhhh---CHHHHHHHHHHHHHHHHHh-chhHHHHHHHHHHHHhh
Q 043830 198 LEEALSQLFS---DARVLEAQQMAAKQAFCAL-SSGIVANVWNLLNFHVF 243 (248)
Q Consensus 198 l~~~i~~ll~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~ 243 (248)
|+++|.++++ |++++++|++++.+ +++ |+.+++++.++|+++|+
T Consensus 430 la~ai~~~l~~~~~~~~~~~~~~~a~~--~~fsw~~~a~~~~~lY~~ll~ 477 (477)
T d1rzua_ 430 LKQAIRRTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYAALYSQLIS 477 (477)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhhhCCHHHHHHHHHHHHH--hhCCHHHHHHHHHHHHHHHhC
Confidence 9999987775 89999999988743 346 89999999999999874
No 4
>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}
Probab=99.86 E-value=4.6e-21 Score=150.59 Aligned_cols=169 Identities=14% Similarity=0.119 Sum_probs=122.2
Q ss_pred cHHHHHHhcC--CCeEEEEeCC--C-cchHHHHHHHHHHHHH--hCCCeEEEEecCCCCCHHHHHHHHHhcCCceEEecc
Q 043830 39 SIEDLKASLA--HRQVWMASSI--H-RGEEKVMLAVHKVLMQ--KNPNLVTIIVPRHPQHGKEIAQKLQKEGEVVALRSR 111 (248)
Q Consensus 39 ~~~~~r~~~~--~~~v~l~~~~--~-~~~~~~ll~a~~~l~~--~~~~~~lvivG~~~~~~~~l~~~~~~~~l~~~~~~~ 111 (248)
....++++++ +.+++++.|+ . .|+++.+++|++.+.+ ..|+++|+|+|.++...+...+.+.+. +.....+.
T Consensus 19 ~~~~~~~~~~l~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~~~~~~~~-~~~~~~~~ 97 (196)
T d2bfwa1 19 RKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEK-HGNVKVIT 97 (196)
T ss_dssp HHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHHHHHHHHHHH-CTTEEEEC
T ss_pred HHHHHHHHhCCCCCCEEEEEcCCCccccCHHHHHHHHHhhhcccCCCCeEEEEEeecccchhhhhhhhhhc-cceeEEee
Confidence 3456777775 6677777664 2 3788999999999854 357899999998765433333333222 22111111
Q ss_pred cCCCCCCccEEEEcChhHHHHHHhhCCEEEEcCccCCCCCCCCHHHHHhhCCcEEECCCCCChHHHHHHHHhcCCceEEE
Q 043830 112 HEKLMPRTNVYVVDTLGELRQLYKLTPIAVIGGSFLPGLAGHNISEAAAAGCAVLTGPHIGHYSNMVSAMQRLNPKSVLQ 191 (248)
Q Consensus 112 ~~~~~~~~~v~~~~~~~~l~~~y~~ad~~~v~~s~~e~~gg~~~lEA~a~G~Pvi~~~~~~~~~~~~~~~~~~g~g~~~~ 191 (248)
+ ..+..++..+|+.||++ +.||..|++ |.+++|||+||+|||+++.+ ..+ .+.+.+.|+.+.
T Consensus 98 ~-----------~~~~~~l~~~~~~~di~-v~ps~~e~~-~~~~~Eam~~G~pvI~~~~~-~~~----e~i~~~~g~~~~ 159 (196)
T d2bfwa1 98 E-----------MLSREFVRELYGSVDFV-IIPSYFEPF-GLVALEAMCLGAIPIASAVG-GLR----DIITNETGILVK 159 (196)
T ss_dssp S-----------CCCHHHHHHHHTTCSEE-EECCSCCSS-CHHHHHHHHTTCEEEEESCH-HHH----HHCCTTTCEEEC
T ss_pred e-----------ccccccchhcccccccc-ccccccccc-cccchhhhhcCceeeecCCC-ccc----eeecCCceeeEC
Confidence 1 12346899999999995 568888885 89999999999999987532 332 334456678888
Q ss_pred cCCHHHHHHHHHHhhh-CHHHHHHHHHHHHHHHHHh
Q 043830 192 VSGKSELEEALSQLFS-DARVLEAQQMAAKQAFCAL 226 (248)
Q Consensus 192 ~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~ 226 (248)
++|+++++++|.++++ +++.+++|+++|++++.+|
T Consensus 160 ~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~~a~~f 195 (196)
T d2bfwa1 160 AGDPGELANAILKALELSRSDLSKFRENCKKRAMSF 195 (196)
T ss_dssp TTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhC
Confidence 8999999999999887 7999999999999987653
No 5
>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.75 E-value=7e-18 Score=128.72 Aligned_cols=146 Identities=19% Similarity=0.169 Sum_probs=100.7
Q ss_pred CCeEEEEeCCC--cchHHHHHHHHHHHHHhCCCeEEEEecCCCC--CHHHHHHHHHhcCCceEEecccCCCCCCccEEEE
Q 043830 49 HRQVWMASSIH--RGEEKVMLAVHKVLMQKNPNLVTIIVPRHPQ--HGKEIAQKLQKEGEVVALRSRHEKLMPRTNVYVV 124 (248)
Q Consensus 49 ~~~v~l~~~~~--~~~~~~ll~a~~~l~~~~~~~~lvivG~~~~--~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~v~~~ 124 (248)
+.. +++.|+. .|+++.+++|++.+ ++.+++|+|.++. ..+.+.+.+.+... .+|.++
T Consensus 12 ~~~-~l~iGrl~~~K~~~~~i~a~~~l----~~~~l~ivg~~~~~~~~~~~~~~~~~~~~--------------~~v~~~ 72 (166)
T d2f9fa1 12 GDF-WLSVNRIYPEKRIELQLEVFKKL----QDEKLYIVGWFSKGDHAERYARKIMKIAP--------------DNVKFL 72 (166)
T ss_dssp CSC-EEEECCSSGGGTHHHHHHHHHHC----TTSCEEEEBCCCTTSTHHHHHHHHHHHSC--------------TTEEEE
T ss_pred CCE-EEEEecCccccCHHHHHHHHHHh----cCCeEEEEEecccccchhhhhhhhccccc--------------CcEEEe
Confidence 444 4455543 37889999998765 6778999987543 33455555554322 245666
Q ss_pred cC--hhHHHHHHhhCCEEEEcCccCCCCCCCCHHHHHhhCCcEEECCCCCChHHHHHHHHhcCCceEEEcCCHHHHHHHH
Q 043830 125 DT--LGELRQLYKLTPIAVIGGSFLPGLAGHNISEAAAAGCAVLTGPHIGHYSNMVSAMQRLNPKSVLQVSGKSELEEAL 202 (248)
Q Consensus 125 ~~--~~~l~~~y~~ad~~~v~~s~~e~~gg~~~lEA~a~G~Pvi~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~l~~~i 202 (248)
+. ..++..+|+.||++ +.||..|++ |.+++|||++|+|||+++.. ..++ .+.+..+|+ +...|+++++++|
T Consensus 73 g~~~~~~~~~~~~~ad~~-i~ps~~e~~-~~~~~Ea~~~g~pvi~s~~~-~~~e---~i~~~~~g~-~~~~d~~~~~~~i 145 (166)
T d2f9fa1 73 GSVSEEELIDLYSRCKGL-LCTAKDEDF-GLTPIEAMASGKPVIAVNEG-GFKE---TVINEKTGY-LVNADVNEIIDAM 145 (166)
T ss_dssp ESCCHHHHHHHHHHCSEE-EECCSSCCS-CHHHHHHHHTTCCEEEESSH-HHHH---HCCBTTTEE-EECSCHHHHHHHH
T ss_pred eccccccccccccccccc-ccccccccc-cccccccccccccceeecCC-ccee---eecCCcccc-cCCCCHHHHHHHH
Confidence 64 36799999999995 568888885 89999999999999997543 3333 333444444 4446999999999
Q ss_pred HHhhhCHH-HHHHHHHHHH
Q 043830 203 SQLFSDAR-VLEAQQMAAK 220 (248)
Q Consensus 203 ~~ll~~~~-~~~~~~~~~~ 220 (248)
..+++|++ .++.+.++|+
T Consensus 146 ~~l~~~~~~~~~~~~~~a~ 164 (166)
T d2f9fa1 146 KKVSKNPDKFKKDCFRRAK 164 (166)
T ss_dssp HHHHHCTTTTHHHHHHHHH
T ss_pred HHHHhCHHHHHHHHHHHHh
Confidence 99999975 4444444443
No 6
>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]}
Probab=99.71 E-value=1.5e-16 Score=139.81 Aligned_cols=187 Identities=10% Similarity=0.072 Sum_probs=130.1
Q ss_pred HHHHHHhcCCCeEEEEeCCC--cchHHHHHHHHHHHHHhCCC----eEEEEecCCCCC--------HHHHHHHHHhcCCc
Q 043830 40 IEDLKASLAHRQVWMASSIH--RGEEKVMLAVHKVLMQKNPN----LVTIIVPRHPQH--------GKEIAQKLQKEGEV 105 (248)
Q Consensus 40 ~~~~r~~~~~~~v~l~~~~~--~~~~~~ll~a~~~l~~~~~~----~~lvivG~~~~~--------~~~l~~~~~~~~l~ 105 (248)
..+++..++++++++..++. .|++..+++|+.++.+++|+ +.+++++.+... ..++.+++.+.+-.
T Consensus 244 ~~~l~~~~~~~~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~~~~~v~lv~~~~~~~~~~~~~~~~~~ev~~lv~~in~~ 323 (456)
T d1uqta_ 244 LAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGK 323 (456)
T ss_dssp HHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCeEEEEeCCCchhhchHHHHHHHHHHHHhCccccccEEEEEEcCCcccchHHHHHHHHHHHHHHHHHHhh
Confidence 45667777788888887764 48899999999999998886 456666643321 02223332221100
Q ss_pred eEEecccCCCCCCccEEEEc--ChhHHHHHHhhCCEEEEcCccCCCCCCCCHHHHHhhCCc-----EEECCCCCChHHHH
Q 043830 106 VALRSRHEKLMPRTNVYVVD--TLGELRQLYKLTPIAVIGGSFLPGLAGHNISEAAAAGCA-----VLTGPHIGHYSNMV 178 (248)
Q Consensus 106 ~~~~~~~~~~~~~~~v~~~~--~~~~l~~~y~~ad~~~v~~s~~e~~gg~~~lEA~a~G~P-----vi~~~~~~~~~~~~ 178 (248)
....+.. ..+++.+ +..++..+|+.||+++ .+|+.||| |++++||||||+| +|+|..+ +..+
T Consensus 324 --~~~~~~~----~~v~~~~~~~~~~l~a~~~~Adv~v-~~s~~EG~-~lv~~Ea~a~~~p~~~g~lIlS~~~-G~~~-- 392 (456)
T d1uqta_ 324 --YGQLGWT----PLYYLNQHFDRKLLMKIFRYSDVGL-VTPLRDGM-NLVAKEYVAAQDPANPGVLVLSQFA-GAAN-- 392 (456)
T ss_dssp --HCBTTBC----SEEEECSCCCHHHHHHHHHHCSEEE-ECCSSBSC-CHHHHHHHHHSCTTSCCEEEEETTB-GGGG--
T ss_pred --hccCCCC----ceeeccCCcCHHHHhHHHhhhceee-cCCccCCC-CcHHHHHHHhCCCCCCCcEEEeCCC-CCHH--
Confidence 0011111 2344444 4578999999999965 47888997 9999999999999 7777654 3333
Q ss_pred HHHHhcCCceEEEcCCHHHHHHHHHHhhh-CHHHHHHHHHHHHHHHHHh-chhHHHHHHHHHHHH
Q 043830 179 SAMQRLNPKSVLQVSGKSELEEALSQLFS-DARVLEAQQMAAKQAFCAL-SSGIVANVWNLLNFH 241 (248)
Q Consensus 179 ~~~~~~g~g~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~ 241 (248)
.+ . .|+.+.+.|++++|++|.++|+ +++.+++|.+++++++.++ ...-++++++.++++
T Consensus 393 -~l-~--~g~lVnP~d~~~~A~ai~~aL~~~~~er~~~~~~~~~~v~~~~~~~W~~~fl~~l~~~ 453 (456)
T d1uqta_ 393 -EL-T--SALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQI 453 (456)
T ss_dssp -TC-T--TSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred -Hh-C--CeEEECcCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhh
Confidence 22 2 2488889999999999999998 6789999999999999876 344456777777664
No 7
>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}
Probab=98.91 E-value=1.7e-08 Score=83.62 Aligned_cols=112 Identities=15% Similarity=0.145 Sum_probs=79.2
Q ss_pred EEEcChhHHHHHHhhCCEEEEcCccCCCCCCCCHHHHHhhCCcEEECCCC--CChH-HHHHHHHhcCCceEEEc--CCHH
Q 043830 122 YVVDTLGELRQLYKLTPIAVIGGSFLPGLAGHNISEAAAAGCAVLTGPHI--GHYS-NMVSAMQRLNPKSVLQV--SGKS 196 (248)
Q Consensus 122 ~~~~~~~~l~~~y~~ad~~~v~~s~~e~~gg~~~lEA~a~G~Pvi~~~~~--~~~~-~~~~~~~~~g~g~~~~~--~~~~ 196 (248)
.+.+...++.++|+.||+++. .+ |+.++.|++++|+|+|+-|.. .+-+ ..+..+.+.|.|..+.. -+.+
T Consensus 234 ~v~~f~~~~~~lm~~adl~It-----~~-G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~~~G~~~~~~~~~~~~e 307 (351)
T d1f0ka_ 234 KVTEFIDDMAAAYAWADVVVC-----RS-GALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVD 307 (351)
T ss_dssp EEESCCSCHHHHHHHCSEEEE-----CC-CHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHH
T ss_pred eeeeehhhHHHHHHhCchhhc-----cc-cchHHHHHHHhCCceeeeecccCCchHHHHHHHHHHCCCEEEechhhCCHH
Confidence 344444578899999999765 32 457789999999999986632 1223 35778888885443332 2578
Q ss_pred HHHHHHHHhhhCHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHhhh
Q 043830 197 ELEEALSQLFSDARVLEAQQMAAKQAFCALSSGIVANVWNLLNFHVFR 244 (248)
Q Consensus 197 ~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 244 (248)
.+.+++..+ +++.+.+|++++++.. ...+++++.+.+.++.+.
T Consensus 308 ~l~~~l~~l--~~~~~~~~~~~~~~~~---~~~~a~~i~~~i~~l~~~ 350 (351)
T d1f0ka_ 308 AVANTLAGW--SRETLLTMAERARAAS---IPDATERVANEVSRVARA 350 (351)
T ss_dssp HHHHHHHTC--CHHHHHHHHHHHHHTC---CTTHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhh--CHHHHHHHHHHHHccC---CccHHHHHHHHHHHHHhc
Confidence 888887765 6777888998887642 457889999999988753
No 8
>d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]}
Probab=98.85 E-value=2.3e-08 Score=84.73 Aligned_cols=204 Identities=13% Similarity=0.070 Sum_probs=124.9
Q ss_pred CHHHHHHHHHcCCCCCCeEEcCCcccccccCCCCCCcccHHHHHH---hcCCCeEEEEe-CCCc--chHHHHHHHHHHHH
Q 043830 1 STLQAIRFQLLEASPFTINFSGDLKYVHEYDESEGDIGSIEDLKA---SLAHRQVWMAS-SIHR--GEEKVMLAVHKVLM 74 (248)
Q Consensus 1 s~~~~~~l~~~gv~~~kI~v~gn~~~d~~~~~~~~~~~~~~~~r~---~~~~~~v~l~~-~~~~--~~~~~ll~a~~~l~ 74 (248)
++..+++|.++|.++++|.++|++.+|.... ...+.. .....+++++. .+.. .....+++++..+.
T Consensus 151 t~~~~~~L~~~Ge~~~~I~~vG~p~~D~i~~--------~~~~~~~~~~~~~~~~~lvt~hr~~n~~~~~~~~~~~~~~~ 222 (373)
T d1v4va_ 151 TPLAKANLLKEGKREEGILVTGQTGVDAVLL--------AAKLGRLPEGLPEGPYVTVTMHRRENWPLLSDLAQALKRVA 222 (373)
T ss_dssp SHHHHHHHHTTTCCGGGEEECCCHHHHHHHH--------HHHHCCCCTTCCSSCEEEECCCCGGGGGGHHHHHHHHHHHH
T ss_pred chhhhhhhhhhcccccceeecccchhhHHHh--------hhhhcccccccccccceeEEeccccccchHHHHHHHHHHHh
Confidence 4678899999999999999999987664210 000000 01223344433 2211 23456777777777
Q ss_pred HhCCCeEEEEecCCCCCHHHHHHHHHh-cCCceEEecccCCCCCCccEEEEcCh--hHHHHHHhhCCEEEEcCccCCCCC
Q 043830 75 QKNPNLVTIIVPRHPQHGKEIAQKLQK-EGEVVALRSRHEKLMPRTNVYVVDTL--GELRQLYKLTPIAVIGGSFLPGLA 151 (248)
Q Consensus 75 ~~~~~~~lvivG~~~~~~~~l~~~~~~-~~l~~~~~~~~~~~~~~~~v~~~~~~--~~l~~~y~~ad~~~v~~s~~e~~g 151 (248)
....++.+++ +.++. ........+ ... ..++.++.++ .+.-.++..|+++ ++-|
T Consensus 223 ~~~~~~~~i~-p~~~~--~~~~~~~~~~~~~-------------~~n~~~~~~l~~~~~l~ll~~s~~v-ignS------ 279 (373)
T d1v4va_ 223 EAFPHLTFVY-PVHLN--PVVREAVFPVLKG-------------VRNFVLLDPLEYGSMAALMRASLLL-VTDS------ 279 (373)
T ss_dssp HHCTTSEEEE-ECCSC--HHHHHHHHHHHTT-------------CTTEEEECCCCHHHHHHHHHTEEEE-EESC------
T ss_pred hhcccceeee-eeccc--ccchhhhhhhhcc-------------cccceeeccchHHHHHHHhhhceeE-eccc------
Confidence 7777776544 44333 222222211 111 1245566643 4667778888874 4433
Q ss_pred CCCHHHHHhhCCcEEECCCCCChHHHHHHHHhcCCceEEEcCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHHhchhHH
Q 043830 152 GHNISEAAAAGCAVLTGPHIGHYSNMVSAMQRLNPKSVLQVSGKSELEEALSQLFSDARVLEAQQMAAKQAFCALSSGIV 231 (248)
Q Consensus 152 g~~~lEA~a~G~Pvi~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (248)
|--+.||.++|+|+|.-...+..++.. +.|. .++...|++++.+++..++.++..++.|.....-| ....++
T Consensus 280 ssgi~Ea~~lg~P~Inir~~~eRqeg~----~~g~-nvlv~~d~~~I~~~i~~~l~~~~~~~~~~~~~npY---GdG~as 351 (373)
T d1v4va_ 280 GGLQEEGAALGVPVVVLRNVTERPEGL----KAGI-LKLAGTDPEGVYRVVKGLLENPEELSRMRKAKNPY---GDGKAG 351 (373)
T ss_dssp HHHHHHHHHTTCCEEECSSSCSCHHHH----HHTS-EEECCSCHHHHHHHHHHHHTCHHHHHHHHHSCCSS---CCSCHH
T ss_pred chhhhcchhhcCcEEEeCCCccCHHHH----hcCe-eEEcCCCHHHHHHHHHHHHcCHHHHhhcccCCCCC---CCCHHH
Confidence 122589999999999754445666543 2342 44455799999999999999998877665532111 146899
Q ss_pred HHHHHHHHHHhh
Q 043830 232 ANVWNLLNFHVF 243 (248)
Q Consensus 232 ~~~l~~~~~~~~ 243 (248)
+++++.+.+++.
T Consensus 352 ~rI~~~L~~~~~ 363 (373)
T d1v4va_ 352 LMVARGVAWRLG 363 (373)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHhC
Confidence 999999988764
No 9
>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]}
Probab=98.71 E-value=2.5e-07 Score=77.46 Aligned_cols=113 Identities=14% Similarity=0.142 Sum_probs=77.5
Q ss_pred ccEEEEcChhHHHHHHhhCCEEEEcCccCCCCCCCCHHHHHhhCCcEEECCCCCChHHHHHHHHhcCCceEEEcC--CHH
Q 043830 119 TNVYVVDTLGELRQLYKLTPIAVIGGSFLPGLAGHNISEAAAAGCAVLTGPHIGHYSNMVSAMQRLNPKSVLQVS--GKS 196 (248)
Q Consensus 119 ~~v~~~~~~~~l~~~y~~ad~~~v~~s~~e~~gg~~~lEA~a~G~Pvi~~~~~~~~~~~~~~~~~~g~g~~~~~~--~~~ 196 (248)
.+|.+.+.. ....++..+|+++. .| |..++.||+++|+|+|+.|..++-......+.+.|.|..+... +++
T Consensus 286 ~~v~~~~~~-p~~~ll~~~~~~I~-----hg-G~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~G~g~~l~~~~~~~~ 358 (401)
T d1rrva_ 286 DDCFAIDEV-NFQALFRRVAAVIH-----HG-SAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFE 358 (401)
T ss_dssp TTEEEESSC-CHHHHGGGSSEEEE-----CC-CHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHH
T ss_pred CCEEEEecc-CcHHHhhhccEEEe-----cC-CchHHHHHHHhCCCEEEecccccHHHHHHHHHHCCCEEEcCcCCCCHH
Confidence 356777755 46778999999654 33 3456999999999999988766655566677777866655553 689
Q ss_pred HHHHHHHHhhhCHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHhh
Q 043830 197 ELEEALSQLFSDARVLEAQQMAAKQAFCALSSGIVANVWNLLNFHVF 243 (248)
Q Consensus 197 ~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 243 (248)
.|+++|.++|+ ++.+++ +++.......+.+.+..+.+.+.+.
T Consensus 359 ~L~~ai~~vl~-~~~r~~----a~~~~~~~~~~g~~~aa~~ie~~~~ 400 (401)
T d1rrva_ 359 SLSAALTTVLA-PETRAR----AEAVAGMVLTDGAAAAADLVLAAVG 400 (401)
T ss_dssp HHHHHHHHHTS-HHHHHH----HHHHTTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC-HHHHHH----HHHHHHHHhhcCHHHHHHHHHHHhC
Confidence 99999999994 554443 3332222233445667777776653
No 10
>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}
Probab=98.64 E-value=3e-08 Score=83.01 Aligned_cols=114 Identities=14% Similarity=0.101 Sum_probs=77.2
Q ss_pred cEEEEcChhHHHHHHhhCCEEEEcCccCCCCCCCCHHHHHhhCCcEEECCCCCC----hHHHHHHHHhcCCceEEEcC--
Q 043830 120 NVYVVDTLGELRQLYKLTPIAVIGGSFLPGLAGHNISEAAAAGCAVLTGPHIGH----YSNMVSAMQRLNPKSVLQVS-- 193 (248)
Q Consensus 120 ~v~~~~~~~~l~~~y~~ad~~~v~~s~~e~~gg~~~lEA~a~G~Pvi~~~~~~~----~~~~~~~~~~~g~g~~~~~~-- 193 (248)
+|++.+.. +...++..+|+++. .+ |..++.|||++|+|+|+.|..++ -....+.+.+.|.|..+...
T Consensus 271 ~v~i~~~~-p~~~ll~~a~~~v~-----hg-G~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l~~~~~ 343 (391)
T d1pn3a_ 271 DCFVVGEV-NLQELFGRVAAAIH-----HD-SAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAVDGPVP 343 (391)
T ss_dssp TCCEESSC-CHHHHHTTSSCEEE-----ES-CHHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHHTSEEEECCSSC
T ss_pred CEEEeccc-CHHHHHhhccEEEe-----cC-chHHHHHHHHhCCcEEEeccccCCcchHHHHHHHHHHCCCEEEcCcCCC
Confidence 45666654 46778999999654 22 34579999999999999775432 22345566677876666554
Q ss_pred CHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHhhhh
Q 043830 194 GKSELEEALSQLFSDARVLEAQQMAAKQAFCALSSGIVANVWNLLNFHVFRR 245 (248)
Q Consensus 194 ~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 245 (248)
++++|+++|.+++++ +.+ +++++..+......+.+..+.+.+++.++
T Consensus 344 ~~~~l~~~i~~~l~~-~~r----~~a~~~a~~~~~~g~~~aa~~i~~~l~~~ 390 (391)
T d1pn3a_ 344 TIDSLSAALDTALAP-EIR----ARATTVADTIRADGTTVAAQLLFDAVSLE 390 (391)
T ss_dssp CHHHHHHHHHHHTST-THH----HHHHHHGGGSCSCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhCH-HHH----HHHHHHHHHHHhcCHHHHHHHHHHHHHhc
Confidence 589999999999965 333 34444433333456677778888877654
No 11
>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}
Probab=98.63 E-value=8.8e-08 Score=80.02 Aligned_cols=83 Identities=13% Similarity=0.195 Sum_probs=63.5
Q ss_pred ccEEEEcChhHHHHHHhhCCEEEEcCccCCCCCCCCHHHHHhhCCcEEECCCCCChHHHHHHHHhcCCceEEEcC--CHH
Q 043830 119 TNVYVVDTLGELRQLYKLTPIAVIGGSFLPGLAGHNISEAAAAGCAVLTGPHIGHYSNMVSAMQRLNPKSVLQVS--GKS 196 (248)
Q Consensus 119 ~~v~~~~~~~~l~~~y~~ad~~~v~~s~~e~~gg~~~lEA~a~G~Pvi~~~~~~~~~~~~~~~~~~g~g~~~~~~--~~~ 196 (248)
.++.+.+.. ....+|..+|+++. .| |..++.||+++|+|+|+-|..++-....+.+.+.|.|..+... +++
T Consensus 285 ~nv~~~~~~-p~~~~l~~~~~~V~-----hg-G~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l~~~G~g~~l~~~~~~~~ 357 (401)
T d1iira_ 285 ADCFAIGEV-NHQVLFGRVAAVIH-----HG-GAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFD 357 (401)
T ss_dssp GGEEECSSC-CHHHHGGGSSEEEE-----CC-CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHH
T ss_pred CCEEEEecc-CHHHHHhhcCEEEe-----cC-CchHHHHHHHhCCCEEEccccccHHHHHHHHHHCCCEEEcCcCCCCHH
Confidence 356666655 46788999999553 33 4567999999999999988766666677778888876655544 799
Q ss_pred HHHHHHHHhhhC
Q 043830 197 ELEEALSQLFSD 208 (248)
Q Consensus 197 ~l~~~i~~ll~~ 208 (248)
+|+++|.++|++
T Consensus 358 ~l~~ai~~~l~~ 369 (401)
T d1iira_ 358 SLSAALATALTP 369 (401)
T ss_dssp HHHHHHHHHTSH
T ss_pred HHHHHHHHHhCH
Confidence 999999999954
No 12
>d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]}
Probab=98.57 E-value=1.2e-06 Score=74.05 Aligned_cols=207 Identities=14% Similarity=0.110 Sum_probs=120.5
Q ss_pred CHHHHHHHHHcCCCCCCeEEcCCccccccc--CC-CCCCcccHHHHHHhcC----CCeEEEEeCCC-----cchHHHHHH
Q 043830 1 STLQAIRFQLLEASPFTINFSGDLKYVHEY--DE-SEGDIGSIEDLKASLA----HRQVWMASSIH-----RGEEKVMLA 68 (248)
Q Consensus 1 s~~~~~~l~~~gv~~~kI~v~gn~~~d~~~--~~-~~~~~~~~~~~r~~~~----~~~v~l~~~~~-----~~~~~~ll~ 68 (248)
++..+++|.++|.++++|.++|++.+|... .. ..............+. +.+++++. .| .+..+.++.
T Consensus 149 ~~~~~~~L~~~G~~~~~I~~vG~~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilvt-~H~~~~~~~~~~~i~~ 227 (376)
T d1f6da_ 149 TETSRQNLLRENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVT-GHRRESFGRGFEEICH 227 (376)
T ss_dssp SHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEEC-CCCBSSCCHHHHHHHH
T ss_pred cHHHHhHHHhcCCCccccceecCchHHHHHHHHhhhhccchhhhhhhccccccCCCCceEEEe-cccchhhhhhHHHHHH
Confidence 467899999999999999999998876421 00 0000000011111111 34455443 23 233567788
Q ss_pred HHHHHHHhCCCeEEEEecCCCCCHHHHHHHHHh-cCCceEEecccCCCCCCccEEEEcCh--hHHHHHHhhCCEEEEcCc
Q 043830 69 VHKVLMQKNPNLVTIIVPRHPQHGKEIAQKLQK-EGEVVALRSRHEKLMPRTNVYVVDTL--GELRQLYKLTPIAVIGGS 145 (248)
Q Consensus 69 a~~~l~~~~~~~~lvivG~~~~~~~~l~~~~~~-~~l~~~~~~~~~~~~~~~~v~~~~~~--~~l~~~y~~ad~~~v~~s 145 (248)
++..+.....++. ++.+.++.. .......+ ... ..++.+.++. .+.-.++..|+++ ++-|
T Consensus 228 ~l~~~~~~~~~~~-ii~p~~~~~--~~~~~~~~~~~~-------------~~ni~~~~~l~~~~fl~ll~~a~~v-ignS 290 (376)
T d1f6da_ 228 ALADIATTHQDIQ-IVYPVHLNP--NVREPVNRILGH-------------VKNVILIDPQEYLPFVWLMNHAWLI-LTDS 290 (376)
T ss_dssp HHHHHHHHCTTEE-EEEECCBCH--HHHHHHHHHHTT-------------CTTEEEECCCCHHHHHHHHHHCSEE-EESS
T ss_pred HHhhhhhhcceeE-Eecccccch--hhhhhHhhhhcc-------------cccceeeccccHHHHHHHHhhceEE-EecC
Confidence 8877777666665 455655542 22222211 111 1356666654 4566788999985 4433
Q ss_pred cCCCCCCCCHHHHHhhCCcEEECCCCCChHHHHHHHHhcCCceEEEcCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHH
Q 043830 146 FLPGLAGHNISEAAAAGCAVLTGPHIGHYSNMVSAMQRLNPKSVLQVSGKSELEEALSQLFSDARVLEAQQMAAKQAFCA 225 (248)
Q Consensus 146 ~~e~~gg~~~lEA~a~G~Pvi~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~ 225 (248)
- +| +.||..+|+|+|.-......++.. +.+. ......|.+++.+++.++++++..++.+.... ..
T Consensus 291 s----sg--i~Ea~~lg~P~Inir~~ter~~~~----~~g~-~i~v~~~~~~I~~ai~~~l~~~~~~~~~~~~~----np 355 (376)
T d1f6da_ 291 G----GI--QEEAPSLGKPVLVMRDTTERPEAV----TAGT-VRLVGTDKQRIVEEVTRLLKDENEYQAMSRAH----NP 355 (376)
T ss_dssp S----GG--GGTGGGGTCCEEECSSCCSCHHHH----HHTS-EEECCSSHHHHHHHHHHHHHCHHHHHHHHHSC----CT
T ss_pred c----ch--HhhHHHhCCCEEEcCCCccCccce----ecCe-eEECCCCHHHHHHHHHHHHhChHhhhhhccCC----CC
Confidence 1 12 479999999999732222444433 2332 33334799999999999999887654433321 11
Q ss_pred h-chhHHHHHHHHHHH
Q 043830 226 L-SSGIVANVWNLLNF 240 (248)
Q Consensus 226 ~-~~~~~~~~l~~~~~ 240 (248)
+ ...+++++++.++.
T Consensus 356 YGdG~as~rI~~iLk~ 371 (376)
T d1f6da_ 356 YGDGQACSRILEALKN 371 (376)
T ss_dssp TCCSCHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHh
Confidence 3 36889999988875
No 13
>d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]}
Probab=98.53 E-value=3.3e-07 Score=77.53 Aligned_cols=208 Identities=12% Similarity=0.093 Sum_probs=116.8
Q ss_pred CHHHHHHHHHcCCCCCCeEEcCCcccccccCCCCCCcccHHHHHHhcCCCeEEEEeCCCc-----chHHHHHHHHHHHHH
Q 043830 1 STLQAIRFQLLEASPFTINFSGDLKYVHEYDESEGDIGSIEDLKASLAHRQVWMASSIHR-----GEEKVMLAVHKVLMQ 75 (248)
Q Consensus 1 s~~~~~~l~~~gv~~~kI~v~gn~~~d~~~~~~~~~~~~~~~~r~~~~~~~v~l~~~~~~-----~~~~~ll~a~~~l~~ 75 (248)
++..+++|.++|.++++|.++||+.+|......... . .......+...+.+++. .|+ ......+.++..+..
T Consensus 151 t~~~~~~L~~~G~~~~~I~~vG~~~~D~i~~~~~~~-~-~~~~~~~~~~~~~ilvt-~Hr~~~~~~~~~~~~~~~~~~~~ 227 (377)
T d1o6ca_ 151 TGQAKDNLLKENKKADSIFVTGNTAIDALNTTVRDG-Y-SHPVLDQVGEDKMILLT-AHRRENLGEPMENMFKAIRRIVG 227 (377)
T ss_dssp SHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHCCSS-C-CCSTTTTTTTSEEEEEC-C----------HHHHHHHHHHHH
T ss_pred chhhhhhhhhhccccceEeeccchhHHHHHHHHHHH-H-hhhhhhhccCCceEEEE-eccccccccchHHHHHHHHhhcc
Confidence 467899999999999999999998777421000000 0 00011122334444443 231 112345555555555
Q ss_pred hCCCeEEEEecCCCCCHHHHHHHHHhcCCceEEecccCCCCCCccEEEEcCh--hHHHHHHhhCCEEEEcCccCCCCCCC
Q 043830 76 KNPNLVTIIVPRHPQHGKEIAQKLQKEGEVVALRSRHEKLMPRTNVYVVDTL--GELRQLYKLTPIAVIGGSFLPGLAGH 153 (248)
Q Consensus 76 ~~~~~~lvivG~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~--~~l~~~y~~ad~~~v~~s~~e~~gg~ 153 (248)
..++..+ +.+.++.. .+.....+. +. ...+|.+..++ .+.-.++..|+++ ++-| |-
T Consensus 228 ~~~~~~~-i~~~~~~~--~~~~~~~~~-~~-----------~~~ni~~~~~l~~~~fl~llk~s~~v-IgnS------ss 285 (377)
T d1o6ca_ 228 EFEDVQV-VYPVHLNP--VVREAAHKH-FG-----------DSDRVHLIEPLEVIDFHNFAAKSHFI-LTDS------GG 285 (377)
T ss_dssp HCTTEEE-EEC----C--HHHHHHHHC--------------CCSSEEECCCCCHHHHHHHHHHCSEE-EEC--------C
T ss_pred ccccccc-cccccccc--ccchhhhhc-cc-----------cccceEeccccchHHHHHHHhhhhee-eccc------ch
Confidence 6666654 44544433 233332221 11 12357777654 4677889999985 4433 12
Q ss_pred CHHHHHhhCCcEEE-CCCCCChHHHHHHHHhcCCceEEEcCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHHh-chhHH
Q 043830 154 NISEAAAAGCAVLT-GPHIGHYSNMVSAMQRLNPKSVLQVSGKSELEEALSQLFSDARVLEAQQMAAKQAFCAL-SSGIV 231 (248)
Q Consensus 154 ~~lEA~a~G~Pvi~-~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~-~~~~~ 231 (248)
-+.||..+|+|+|. ++.+ ..++. .+.|. ..+...|.+++.+++..+++++...+.+.+.. ..+ ...++
T Consensus 286 ~i~Ea~~lg~P~Inir~~t-ERqe~----~~~g~-nilv~~~~~~I~~~i~~~l~~~~~~~~~~~~~----npYGdG~as 355 (377)
T d1o6ca_ 286 VQEEAPSLGKPVLVLRDTT-ERPEG----VEAGT-LKLAGTDEENIYQLAKQLLTDPDEYKKMSQAS----NPYGDGEAS 355 (377)
T ss_dssp HHHHGGGGTCCEEEECSCC-C---C----TTTTS-SEEECSCHHHHHHHHHHHHHCHHHHHHHHHCC----CTTCCSCHH
T ss_pred hHHhhhhhhceEEEeCCCC-cCcch----hhcCe-eEECCCCHHHHHHHHHHHHhChHHHhhhccCC----CCCCCChHH
Confidence 26899999999996 3322 34332 23343 33444799999999999999988776554321 123 36799
Q ss_pred HHHHHHHHHHhh
Q 043830 232 ANVWNLLNFHVF 243 (248)
Q Consensus 232 ~~~l~~~~~~~~ 243 (248)
+++++.+.+.+.
T Consensus 356 ~rI~~~L~~~~~ 367 (377)
T d1o6ca_ 356 RRIVEELLFHYG 367 (377)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHhhC
Confidence 999998877554
No 14
>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]}
Probab=97.97 E-value=2.2e-05 Score=66.51 Aligned_cols=95 Identities=8% Similarity=0.063 Sum_probs=62.2
Q ss_pred cEEEEcChhHHHHHHh--hCCEEEEcCccCCCCCCCCHHHHHhhCCcEEECCCCCChHHHHHHHHhc-CCceEEEcC-CH
Q 043830 120 NVYVVDTLGELRQLYK--LTPIAVIGGSFLPGLAGHNISEAAAAGCAVLTGPHIGHYSNMVSAMQRL-NPKSVLQVS-GK 195 (248)
Q Consensus 120 ~v~~~~~~~~l~~~y~--~ad~~~v~~s~~e~~gg~~~lEA~a~G~Pvi~~~~~~~~~~~~~~~~~~-g~g~~~~~~-~~ 195 (248)
+|++.+.. .-.+++. .+++++. -| |..++.||+..|+|+|+.|..++-......+.+. |.|..+..+ +.
T Consensus 347 Nv~~~~~~-Pq~~lL~hp~~~~fIt-----HG-G~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l~~~~t~ 419 (473)
T d2pq6a1 347 RGLIASWC-PQDKVLNHPSIGGFLT-----HC-GWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTNVKR 419 (473)
T ss_dssp TEEEESCC-CHHHHHTSTTEEEEEE-----CC-CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCSSCCH
T ss_pred ceEEeeeC-CHHHHhcCCcCcEEEe-----cC-CccHHHHHHHcCCCEEeccchhhhHHHHHHHHHHcCeEEeeCCCcCH
Confidence 56665533 2345574 4555433 22 3346899999999999988777777766666444 644443322 89
Q ss_pred HHHHHHHHHhhhCHHHHHHHHHHHHHH
Q 043830 196 SELEEALSQLFSDARVLEAQQMAAKQA 222 (248)
Q Consensus 196 ~~l~~~i~~ll~~~~~~~~~~~~~~~~ 222 (248)
++|+++|.++|+|+.- +++++++++.
T Consensus 420 ~~l~~ai~~vl~d~~~-~~~r~~a~~l 445 (473)
T d2pq6a1 420 EELAKLINEVIAGDKG-KKMKQKAMEL 445 (473)
T ss_dssp HHHHHHHHHHHTSHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHcCChH-HHHHHHHHHH
Confidence 9999999999999863 2344444443
No 15
>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=97.82 E-value=8.4e-05 Score=62.77 Aligned_cols=85 Identities=8% Similarity=0.018 Sum_probs=57.8
Q ss_pred ccEEEEcChhHHHHHHh--hCCEEEEcCccCCCCCCCCHHHHHhhCCcEEECCCCCChHHHHHHHHh-cCCceEEEc---
Q 043830 119 TNVYVVDTLGELRQLYK--LTPIAVIGGSFLPGLAGHNISEAAAAGCAVLTGPHIGHYSNMVSAMQR-LNPKSVLQV--- 192 (248)
Q Consensus 119 ~~v~~~~~~~~l~~~y~--~ad~~~v~~s~~e~~gg~~~lEA~a~G~Pvi~~~~~~~~~~~~~~~~~-~g~g~~~~~--- 192 (248)
.+|++.+... -.++++ .+++++. -| |..++.||+.+|+|+|+.|..++-......+.+ .|.|..+..
T Consensus 334 ~nv~~~~w~P-q~~lL~hp~~~~fVt-----HG-G~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~e~lG~Gv~l~~~~~ 406 (471)
T d2vcha1 334 RGFVIPFWAP-QAQVLAHPSTGGFLT-----HC-GWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDD 406 (471)
T ss_dssp TEEEEESCCC-HHHHHHSTTEEEEEE-----CC-CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTT
T ss_pred CCeeecccCC-HHHHhcCccCCEEEe-----cC-CccHHHHHHHcCCCEEEcccccccHHHHHHHHHHheeEEEEecCCC
Confidence 4577777431 234564 4566433 22 345689999999999998887777776666644 354433322
Q ss_pred --CCHHHHHHHHHHhhhCHH
Q 043830 193 --SGKSELEEALSQLFSDAR 210 (248)
Q Consensus 193 --~~~~~l~~~i~~ll~~~~ 210 (248)
=+.++|.++|.++++|++
T Consensus 407 ~~~t~~~l~~ai~~vl~~~~ 426 (471)
T d2vcha1 407 GLVRREEVARVVKGLMEGEE 426 (471)
T ss_dssp SCCCHHHHHHHHHHHHTSTH
T ss_pred CcCCHHHHHHHHHHHhCCcH
Confidence 278999999999999864
No 16
>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]}
Probab=97.76 E-value=7.7e-05 Score=62.93 Aligned_cols=85 Identities=15% Similarity=0.126 Sum_probs=57.4
Q ss_pred cEEEEcChhHHHHHH--hhCCEEEEcCccCCCCCCCCHHHHHhhCCcEEECCCCCChHHHHHHHHhc-CCceEEEcC--C
Q 043830 120 NVYVVDTLGELRQLY--KLTPIAVIGGSFLPGLAGHNISEAAAAGCAVLTGPHIGHYSNMVSAMQRL-NPKSVLQVS--G 194 (248)
Q Consensus 120 ~v~~~~~~~~l~~~y--~~ad~~~v~~s~~e~~gg~~~lEA~a~G~Pvi~~~~~~~~~~~~~~~~~~-g~g~~~~~~--~ 194 (248)
++++.+.. ....++ ..+++++. -| |..++.||+..|+|+|+-|..++-......+.+. |.|..+... +
T Consensus 320 nv~~~~~~-pq~~lL~hp~~~~fIt-----HG-G~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~t 392 (450)
T d2c1xa1 320 YGMVVPWA-PQAEVLAHEAVGAFVT-----HC-GWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFT 392 (450)
T ss_dssp TEEEESCC-CHHHHHTSTTEEEEEE-----CC-CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGSCC
T ss_pred cccccccC-ChHhhhccCceeEEEc-----cC-CccHHHHHHHcCCCEEecccccchHHHHHHHHHHcCcEEEecCCCcC
Confidence 44444432 223456 44566443 22 3456899999999999988777776666666553 755544432 8
Q ss_pred HHHHHHHHHHhhhCHHH
Q 043830 195 KSELEEALSQLFSDARV 211 (248)
Q Consensus 195 ~~~l~~~i~~ll~~~~~ 211 (248)
+++|.++|.++|+|+.-
T Consensus 393 ~~~l~~ai~~vL~d~~y 409 (450)
T d2c1xa1 393 KSGLMSCFDQILSQEKG 409 (450)
T ss_dssp HHHHHHHHHHHHHSHHH
T ss_pred HHHHHHHHHHHhcCcHH
Confidence 89999999999999853
No 17
>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]}
Probab=97.60 E-value=0.00011 Score=61.84 Aligned_cols=76 Identities=20% Similarity=0.092 Sum_probs=53.8
Q ss_pred HHhhCCEEEEcCccCCCCCCCCHHHHHhhCCcEEECCCCCChHHHHHHHH-hcCCceEEEc--------CCHHHHHHHHH
Q 043830 133 LYKLTPIAVIGGSFLPGLAGHNISEAAAAGCAVLTGPHIGHYSNMVSAMQ-RLNPKSVLQV--------SGKSELEEALS 203 (248)
Q Consensus 133 ~y~~ad~~~v~~s~~e~~gg~~~lEA~a~G~Pvi~~~~~~~~~~~~~~~~-~~g~g~~~~~--------~~~~~l~~~i~ 203 (248)
....+|+++. -| |..++.||+++|+|+|+.|..++-......++ ..|.|..+.. -++++|+++|.
T Consensus 345 ~~p~~~~fIt-----HG-G~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~~G~G~~l~~~~~~~~~~~t~~~l~~a~~ 418 (461)
T d2acva1 345 AHKAIGGFVS-----HC-GWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLK 418 (461)
T ss_dssp HSTTEEEEEE-----CC-CHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHH
T ss_pred hcccCCEEEe-----cC-CccHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceEEeeccccccCCccCHHHHHHHHH
Confidence 3467778543 22 34569999999999999888777777777764 3465555443 27899999999
Q ss_pred HhhhC-HHHHHH
Q 043830 204 QLFSD-ARVLEA 214 (248)
Q Consensus 204 ~ll~~-~~~~~~ 214 (248)
++|++ +..|+.
T Consensus 419 ~vl~~d~~~r~~ 430 (461)
T d2acva1 419 DLMDKDSIVHKK 430 (461)
T ss_dssp HHTCTTCTHHHH
T ss_pred HHhhCCHHHHHH
Confidence 99965 434433
No 18
>d1w25a1 c.23.1.1 (A:2-140) Response regulator PleD, receiver domain {Caulobacter crescentus [TaxId: 155892]}
Probab=93.08 E-value=0.83 Score=31.24 Aligned_cols=112 Identities=13% Similarity=0.090 Sum_probs=62.9
Q ss_pred eEEEEecCCCCCHHHHHHHHHhcCCceEEecccCCCCCCccEEEEcChhH-HHHHHh-hCCEEEEcCccCCCCCCCCHHH
Q 043830 80 LVTIIVPRHPQHGKEIAQKLQKEGEVVALRSRHEKLMPRTNVYVVDTLGE-LRQLYK-LTPIAVIGGSFLPGLAGHNISE 157 (248)
Q Consensus 80 ~~lvivG~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~-l~~~y~-~ad~~~v~~s~~e~~gg~~~lE 157 (248)
.+++||-+.+...+.+...+...|... ....+-.+ +..+.. .-|++++--.. ++..|..+++
T Consensus 2 arILiVDD~~~~~~~l~~~L~~~g~~v---------------~~a~~~~eal~~~~~~~~dlil~D~~~-p~~~G~~~~~ 65 (139)
T d1w25a1 2 ARILVVDDIEANVRLLEAKLTAEYYEV---------------STAMDGPTALAMAARDLPDIILLDVMM-PGMDGFTVCR 65 (139)
T ss_dssp CEEEEECSSTTHHHHHHHHHHHTTCEE---------------EEESSHHHHHHHHHHHCCSEEEEESCC-SSSCHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCCEE---------------EEEccchhhhhhhhcccceeeeeeccc-cCCCchHHHH
Confidence 467778776665566777777777642 22222222 222222 37776653222 3333554544
Q ss_pred HH-----hhCCcEEECCCCCChHHHHHHHHhcCCceEEEcCCHHHHHHHHHHhhh
Q 043830 158 AA-----AAGCAVLTGPHIGHYSNMVSAMQRLNPKSVLQVSGKSELEEALSQLFS 207 (248)
Q Consensus 158 A~-----a~G~Pvi~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~l~~~i~~ll~ 207 (248)
.+ ...+|||+-....+.....+.+..+..+++..|-+++.|...|..++.
T Consensus 66 ~ir~~~~~~~~piI~lt~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~lr 120 (139)
T d1w25a1 66 KLKDDPTTRHIPVVLITALDGRGDRIQGLESGASDFLTKPIDDVMLFARVRSLTR 120 (139)
T ss_dssp HHHHSTTTTTSCEEEEECSSCHHHHHHHHHHTCCEEEESSCCHHHHHHHHHHHHH
T ss_pred HhhhcccccCCCEEEEEcCCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHH
Confidence 33 356799973333344444444444334567777899999999988774
No 19
>d1rcua_ c.129.1.1 (A:) Hypothetical protein TM1055 {Thermotoga maritima [TaxId: 2336]}
Probab=90.66 E-value=1.3 Score=31.61 Aligned_cols=75 Identities=17% Similarity=0.109 Sum_probs=43.6
Q ss_pred hHHHHHHhhCCEEEEcCccCCCCCCC-CHHHHHhhCCcEEECCCCCChHHHHHH-HHhcC------CceEEEcCCHHHHH
Q 043830 128 GELRQLYKLTPIAVIGGSFLPGLAGH-NISEAAAAGCAVLTGPHIGHYSNMVSA-MQRLN------PKSVLQVSGKSELE 199 (248)
Q Consensus 128 ~~l~~~y~~ad~~~v~~s~~e~~gg~-~~lEA~a~G~Pvi~~~~~~~~~~~~~~-~~~~g------~g~~~~~~~~~~l~ 199 (248)
.....++..||.+++.|. |+|-+ -++|++..++|||+-+..+.+.+.... +.+.+ .-....++|++++.
T Consensus 88 ~Rk~~m~~~sda~I~lPG---G~GTl~El~~a~~l~KPiilln~~g~w~~~i~~~~~~~~~i~~~~~~~i~~~~~~ee~~ 164 (170)
T d1rcua_ 88 MRSFVLLRNADVVVSIGG---EIGTAIEILGAYALGKPVILLRGTGGWTDRISQVLIDGKYLDNRRIVEIHQAWTVEEAV 164 (170)
T ss_dssp HHHHHHHTTCSEEEEESC---CHHHHHHHHHHHHTTCCEEEETTSCHHHHHGGGGCBTTTBSSTTCCSCEEEESSHHHHH
T ss_pred hhHHHHhhcccceeeecc---ccchHHHHHHHHHhCCceEEecCCCchHHHHHHHHHHCCCCCHHHcCeEEEeCCHHHHH
Confidence 355667899999877542 11112 268999999999975433334332211 11111 00244568999988
Q ss_pred HHHHHh
Q 043830 200 EALSQL 205 (248)
Q Consensus 200 ~~i~~l 205 (248)
+.|++|
T Consensus 165 ~~l~~l 170 (170)
T d1rcua_ 165 QIIEQI 170 (170)
T ss_dssp HHHHTC
T ss_pred HHHHcC
Confidence 877653
No 20
>d1dbwa_ c.23.1.1 (A:) Transcriptional regulatory protein FixJ, receiver domain {Rhizobium meliloti [TaxId: 382]}
Probab=90.34 E-value=1.6 Score=28.97 Aligned_cols=113 Identities=14% Similarity=0.092 Sum_probs=59.6
Q ss_pred CeEEEEecCCCCCHHHHHHHHHhcCCceEEecccCCCCCCccEEEEcChhHHHHHHhh--CCEEEEcCccCCCCCCCCHH
Q 043830 79 NLVTIIVPRHPQHGKEIAQKLQKEGEVVALRSRHEKLMPRTNVYVVDTLGELRQLYKL--TPIAVIGGSFLPGLAGHNIS 156 (248)
Q Consensus 79 ~~~lvivG~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~y~~--ad~~~v~~s~~e~~gg~~~l 156 (248)
+.+++||=+.+.....+...++..|.... ....-.+--.++.. -|++++--.. ++..|..++
T Consensus 3 ~~~ILiVDDd~~~~~~l~~~L~~~g~~v~---------------~a~~~~~al~~~~~~~~dlvi~D~~m-p~~~G~e~~ 66 (123)
T d1dbwa_ 3 DYTVHIVDDEEPVRKSLAFMLTMNGFAVK---------------MHQSAEAFLAFAPDVRNGVLVTDLRM-PDMSGVELL 66 (123)
T ss_dssp CCEEEEEESSHHHHHHHHHHHHHTTCEEE---------------EESCHHHHHHHGGGCCSEEEEEECCS-TTSCHHHHH
T ss_pred CCEEEEEECCHHHHHHHHHHHHHCCCEEE---------------EECCHHHHHHHHhhcCCcEEEEeccC-ccccchHHH
Confidence 45667776655544556666666665421 11211222233332 3565442122 333466666
Q ss_pred HHH---hhCCcEEECCCCCChHHHHHHHHhcCCceEEEcCCHHHHHHHHHHhhh
Q 043830 157 EAA---AAGCAVLTGPHIGHYSNMVSAMQRLNPKSVLQVSGKSELEEALSQLFS 207 (248)
Q Consensus 157 EA~---a~G~Pvi~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~l~~~i~~ll~ 207 (248)
+.+ ...+|||+-...++.....+.+..+..+++..|-++++|.+++.+.++
T Consensus 67 ~~lr~~~~~~~iI~lt~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~a~e 120 (123)
T d1dbwa_ 67 RNLGDLKINIPSIVITGHGDVPMAVEAMKAGAVDFIEKPFEDTVIIEAIERASE 120 (123)
T ss_dssp HHHHHTTCCCCEEEEECTTCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHT
T ss_pred HHHHhcCCCCeEEEEEeeCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
Confidence 654 447888863223344444444433333466667899999999887654
No 21
>d1jbea_ c.23.1.1 (A:) CheY protein {Escherichia coli [TaxId: 562]}
Probab=90.21 E-value=1.7 Score=29.03 Aligned_cols=114 Identities=15% Similarity=0.164 Sum_probs=60.2
Q ss_pred CCeEEEEecCCCCCHHHHHHHHHhcCCceEEecccCCCCCCccEEEEcChhHHHHHHhh--CCEEEEcCccCCCCCCCCH
Q 043830 78 PNLVTIIVPRHPQHGKEIAQKLQKEGEVVALRSRHEKLMPRTNVYVVDTLGELRQLYKL--TPIAVIGGSFLPGLAGHNI 155 (248)
Q Consensus 78 ~~~~lvivG~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~y~~--ad~~~v~~s~~e~~gg~~~ 155 (248)
.+++++||=+.+.....+++.++..|+.. |.....-.+-....+. -|++++--.. ++..|..+
T Consensus 3 k~lriLvVDD~~~~r~~i~~~L~~~g~~~--------------v~~a~~g~~a~~~~~~~~~dlii~D~~m-P~~dG~el 67 (128)
T d1jbea_ 3 KELKFLVVDDFSTMRRIVRNLLKELGFNN--------------VEEAEDGVDALNKLQAGGYGFVISDWNM-PNMDGLEL 67 (128)
T ss_dssp TTCCEEEECSCHHHHHHHHHHHHHTTCCC--------------EEEESSHHHHHHHHTTCCCCEEEEESCC-SSSCHHHH
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHHCCCcE--------------EEEecCchHHHHHHhcCCCCEEEEeccc-ccCCHHHH
Confidence 35677777665444355666666666532 2222221222222222 3665553222 33345556
Q ss_pred HHHH-----hhCCcEEECCCCCChHHHHHHHHhcCC-ceEEEcCCHHHHHHHHHHhhh
Q 043830 156 SEAA-----AAGCAVLTGPHIGHYSNMVSAMQRLNP-KSVLQVSGKSELEEALSQLFS 207 (248)
Q Consensus 156 lEA~-----a~G~Pvi~~~~~~~~~~~~~~~~~~g~-g~~~~~~~~~~l~~~i~~ll~ 207 (248)
++.+ ..++|||+-...++.....+.+ +.|. +++..|-+.++|.+.+..++.
T Consensus 68 ~~~ir~~~~~~~~piI~lt~~~~~~~~~~a~-~~G~~~~l~KP~~~~~L~~~l~~~l~ 124 (128)
T d1jbea_ 68 LKTIRADGAMSALPVLMVTAEAKKENIIAAA-QAGASGYVVKPFTAATLEEKLNKIFE 124 (128)
T ss_dssp HHHHHC--CCTTCCEEEEESSCCHHHHHHHH-HTTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHhCccCCCCcEEEEECcCCHHHHHHHH-HCCCCEEEECCCCHHHHHHHHHHHHH
Confidence 6554 3578998622222333333333 4443 455566799999999988773
No 22
>d1p6qa_ c.23.1.1 (A:) CheY protein {Sinorhizobium meliloti, CheY2 [TaxId: 382]}
Probab=89.06 E-value=1.9 Score=28.87 Aligned_cols=113 Identities=12% Similarity=0.102 Sum_probs=60.0
Q ss_pred eEEEEecCCCCCHHHHHHHHHhcCCceEEecccCCCCCCccEEEEcChhHHHHHHhh--CCEEEEcCccCCCCCCCCHHH
Q 043830 80 LVTIIVPRHPQHGKEIAQKLQKEGEVVALRSRHEKLMPRTNVYVVDTLGELRQLYKL--TPIAVIGGSFLPGLAGHNISE 157 (248)
Q Consensus 80 ~~lvivG~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~y~~--ad~~~v~~s~~e~~gg~~~lE 157 (248)
++++||=+.+.....+.+.+.+.|... |.....-.+--.+++. -|++++--.. ++..|..+++
T Consensus 7 ~kILiVDD~~~~~~~l~~~L~~~g~~~--------------v~~a~~~~~al~~l~~~~~dlii~D~~m-P~~~G~el~~ 71 (129)
T d1p6qa_ 7 IKVLIVDDQVTSRLLLGDALQQLGFKQ--------------ITAAGDGEQGMKIMAQNPHHLVISDFNM-PKMDGLGLLQ 71 (129)
T ss_dssp CCEEEECSSHHHHHHHHHHHHTTTCSC--------------EECCSSHHHHHHHHHTSCCSEEEECSSS-CSSCHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCCeE--------------EEEECCHHHHHHHHHhCCCCeEEeeeec-CCCChHHHHH
Confidence 566777665443355666666666532 1111111222233332 4776653222 4344555665
Q ss_pred HH-----hhCCcEEECCCCCChHHHHHHHHhcCCceEEEcCCHHHHHHHHHHhhh
Q 043830 158 AA-----AAGCAVLTGPHIGHYSNMVSAMQRLNPKSVLQVSGKSELEEALSQLFS 207 (248)
Q Consensus 158 A~-----a~G~Pvi~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~l~~~i~~ll~ 207 (248)
.+ ...+|||.-...++.....+....+..+++..|-+.++|.++|..++.
T Consensus 72 ~lr~~~~~~~~pii~lt~~~~~~~~~~a~~~G~~~~l~KP~~~~~L~~~i~~vl~ 126 (129)
T d1p6qa_ 72 AVRANPATKKAAFIILTAQGDRALVQKAAALGANNVLAKPFTIEKMKAAIEAVFG 126 (129)
T ss_dssp HHTTCTTSTTCEEEECCSCCCHHHHHHHHHHTCSCEECCCSSHHHHHHHHHHHHH
T ss_pred HHHhCcccCCCeEEEEEecCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
Confidence 55 356888863322233333333322233466677899999999988874
No 23
>d1i3ca_ c.23.1.1 (A:) Response regulator for cyanobacterial phytochrome {Synechocystis sp. PCC 6803, RCP1 [TaxId: 1148]}
Probab=88.27 E-value=2.7 Score=28.67 Aligned_cols=67 Identities=7% Similarity=0.111 Sum_probs=36.6
Q ss_pred CEEEEcCccCCCCCCCCHHHHHh-----hCCcEEECCCCCChHHHHHHHHhcC-CceEEEcCCHHHHHHHHHHhh
Q 043830 138 PIAVIGGSFLPGLAGHNISEAAA-----AGCAVLTGPHIGHYSNMVSAMQRLN-PKSVLQVSGKSELEEALSQLF 206 (248)
Q Consensus 138 d~~~v~~s~~e~~gg~~~lEA~a-----~G~Pvi~~~~~~~~~~~~~~~~~~g-~g~~~~~~~~~~l~~~i~~ll 206 (248)
|++++--.. ++..|..+++.+- ..+|||+-....+.....+.+ +.| .+++..+-+.++|.+.|..++
T Consensus 58 dlIllD~~m-P~~~G~el~~~ir~~~~~~~iPvi~lT~~~~~~~~~~a~-~~Ga~~yl~KP~~~~~L~~~i~~l~ 130 (144)
T d1i3ca_ 58 NLILLDLNL-PKKDGREVLAEIKQNPDLKRIPVVVLTTSHNEDDVIASY-ELHVNCYLTKSRNLKDLFKMVQGIE 130 (144)
T ss_dssp SEEEECSCC-SSSCHHHHHHHHHHCTTTTTSCEEEEESCCCHHHHHHHH-HTTCSEEEECCSSHHHHHHHHHHHH
T ss_pred CEEEEECcc-ccccchHHHHHHHhCcccCCCeEEEEECCCCHHHHHHHH-HCCCCEEEECCCCHHHHHHHHHHHH
Confidence 565552222 3334555666542 467988622222333333333 334 246666789999988887665
No 24
>d1k68a_ c.23.1.1 (A:) Response regulator for cyanobacterial phytochrome {Calothrix sp. pcc 7601, RcpA [TaxId: 1188]}
Probab=86.02 E-value=3.6 Score=27.81 Aligned_cols=67 Identities=10% Similarity=0.103 Sum_probs=36.0
Q ss_pred CEEEEcCccCCCCCCCCHHHHH-----hhCCcEEECCCCCChHHHHHHHHhcC-CceEEEcCCHHHHHHHHHHhh
Q 043830 138 PIAVIGGSFLPGLAGHNISEAA-----AAGCAVLTGPHIGHYSNMVSAMQRLN-PKSVLQVSGKSELEEALSQLF 206 (248)
Q Consensus 138 d~~~v~~s~~e~~gg~~~lEA~-----a~G~Pvi~~~~~~~~~~~~~~~~~~g-~g~~~~~~~~~~l~~~i~~ll 206 (248)
|++++--. .++..|..+++.+ ...+|||.-....+.....+.+ +.| .+++..|-+.++|.+.|..++
T Consensus 57 dlillD~~-mP~~dG~el~~~ir~~~~~~~iPvI~ls~~~~~~~~~~a~-~~Ga~~yl~KP~~~~~L~~~i~~i~ 129 (140)
T d1k68a_ 57 DLILLDLN-LPKKDGREVLAEIKSDPTLKRIPVVVLSTSINEDDIFHSY-DLHVNCYITKSANLSQLFQIVKGIE 129 (140)
T ss_dssp SEEEECSS-CSSSCHHHHHHHHHHSTTGGGSCEEEEESCCCHHHHHHHH-HTTCSEEEECCSSHHHHHHHHHHHH
T ss_pred CEEEEeec-cccccChHHHHHHHhCcccCCCcEEEEeCCCCHHHHHHHH-HCCCCEEEECCCCHHHHHHHHHHHH
Confidence 56554211 2333455555444 3468998622222333333333 333 346666789999999887665
No 25
>d1k66a_ c.23.1.1 (A:) Response regulator for cyanobacterial phytochrome {Calothrix sp. pcc 7601, RcpB [TaxId: 1188]}
Probab=85.71 E-value=3.9 Score=27.95 Aligned_cols=69 Identities=9% Similarity=0.166 Sum_probs=37.7
Q ss_pred CCEEEEcCccCCCCCCCCHHHHH-----hhCCcEEECCCCCChHHHHHHHHhcCC-ceEEEcCCHHHHHHHHHHhhh
Q 043830 137 TPIAVIGGSFLPGLAGHNISEAA-----AAGCAVLTGPHIGHYSNMVSAMQRLNP-KSVLQVSGKSELEEALSQLFS 207 (248)
Q Consensus 137 ad~~~v~~s~~e~~gg~~~lEA~-----a~G~Pvi~~~~~~~~~~~~~~~~~~g~-g~~~~~~~~~~l~~~i~~ll~ 207 (248)
-|++++--.. +++.|..+++.+ ...+|||+-....+........ +.|. +++..|-+.++|.+.|..++.
T Consensus 63 pdlillD~~m-P~~~G~el~~~ir~~~~~~~ipiI~lT~~~~~~~~~~~~-~~Ga~~~l~KP~~~~~L~~~i~~~l~ 137 (149)
T d1k66a_ 63 PAVILLDLNL-PGTDGREVLQEIKQDEVLKKIPVVIMTTSSNPKDIEICY-SYSISSYIVKPLEIDRLTETVQTFIK 137 (149)
T ss_dssp CSEEEECSCC-SSSCHHHHHHHHTTSTTGGGSCEEEEESCCCHHHHHHHH-HTTCSEEEECCSSHHHHHHHHHHHHH
T ss_pred CCeEEccccc-cCCCcHHHHHHHHhccccCCCeEEEEeCCCCHHHHHHHH-HCCCCEEEECCCCHHHHHHHHHHHHH
Confidence 3565542222 333455555554 3478988622222333333333 3342 455666799999999987773
No 26
>d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]}
Probab=85.31 E-value=0.84 Score=35.83 Aligned_cols=84 Identities=11% Similarity=0.063 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEecCCCCCHHHHHHHHHhcCCceEEecccCCCCCCccE-EEEc--ChhHHHHHHhhCCE
Q 043830 63 EKVMLAVHKVLMQKNPNLVTIIVPRHPQHGKEIAQKLQKEGEVVALRSRHEKLMPRTNV-YVVD--TLGELRQLYKLTPI 139 (248)
Q Consensus 63 ~~~ll~a~~~l~~~~~~~~lvivG~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~v-~~~~--~~~~l~~~y~~ad~ 139 (248)
.+..++....+.++ +..++++|... ..+..+.......... ...+ -+.+ ++.++..+++.||+
T Consensus 199 ~~~~~~L~~~l~~~--~~~ivl~g~~~-e~~~~~~~~~~~~~~~-----------~~~~~~l~g~~sl~el~~li~~a~l 264 (348)
T d1pswa_ 199 HYHYAELAKQLIDE--GYQVVLFGSAK-DHEAGNEILAALNTEQ-----------QAWCRNLAGETQLDQAVILIAACKA 264 (348)
T ss_dssp HHHHHHHHHHHHHT--TCEEEECCCGG-GHHHHHHHHTTSCHHH-----------HTTEEECTTTSCHHHHHHHHHTSSE
T ss_pred hHHHhhhHHHHhhc--CCccccccccc-hHHHHHHHHHhhhccc-----------ccccccccCCccHHHHHHHHhccee
Confidence 45666776777654 45778888643 3233333322221110 0111 1222 35789999999999
Q ss_pred EEEcCccCCCCCCCCHHHHHhhCCcEEE
Q 043830 140 AVIGGSFLPGLAGHNISEAAAAGCAVLT 167 (248)
Q Consensus 140 ~~v~~s~~e~~gg~~~lEA~a~G~Pvi~ 167 (248)
+ ++.. + | .+=-|.++|+|+|+
T Consensus 265 ~-I~~D---t--g-~~HlAaa~g~p~i~ 285 (348)
T d1pswa_ 265 I-VTND---S--G-LMHVAAALNRPLVA 285 (348)
T ss_dssp E-EEES---S--H-HHHHHHHTTCCEEE
T ss_pred E-eecC---c--c-HHHHHHHcCCCEEE
Confidence 5 5432 1 1 24589999999997
No 27
>d1ny5a1 c.23.1.1 (A:1-137) Transcriptional activator sigm54 (NtrC1), N-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=85.27 E-value=3.9 Score=27.50 Aligned_cols=112 Identities=14% Similarity=0.115 Sum_probs=57.7
Q ss_pred EEEEecCCCCCHHHHHHHHHhcCCceEEecccCCCCCCccEEEEcChhHHHHHH--hhCCEEEEcCccCCCCCCCCHHHH
Q 043830 81 VTIIVPRHPQHGKEIAQKLQKEGEVVALRSRHEKLMPRTNVYVVDTLGELRQLY--KLTPIAVIGGSFLPGLAGHNISEA 158 (248)
Q Consensus 81 ~lvivG~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~y--~~ad~~~v~~s~~e~~gg~~~lEA 158 (248)
+++||-+.+.....+...+...|... ....+-.+-..++ ..-|++++--.. ++..|..+++.
T Consensus 2 kILiVDDd~~~~~~l~~~L~~~g~~v---------------~~a~~~~eAl~~l~~~~~dlvilD~~m-p~~~G~e~~~~ 65 (137)
T d1ny5a1 2 NVLVIEDDKVFRGLLEEYLSMKGIKV---------------ESAERGKEAYKLLSEKHFNVVLLDLLL-PDVNGLEILKW 65 (137)
T ss_dssp EEEEECCCHHHHHHHHHHHHHHTCEE---------------EEESSHHHHHHHHHHSCCSEEEEESBC-SSSBHHHHHHH
T ss_pred EEEEEecCHHHHHHHHHHHHHCCCEE---------------EEECCHHHHHHHhhccccccchHHHhh-hhhhHHHHHHH
Confidence 45566655544455556666555532 1222222222222 235665552222 33334444444
Q ss_pred H---hhCCcEEECCCCCChHHHHHHHHhcCCceEEEcCCHHHHHHHHHHhhhC
Q 043830 159 A---AAGCAVLTGPHIGHYSNMVSAMQRLNPKSVLQVSGKSELEEALSQLFSD 208 (248)
Q Consensus 159 ~---a~G~Pvi~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~l~~~i~~ll~~ 208 (248)
+ ...+|||+-...++.....+.+..+-.+++..|-+.++|...+.+.+..
T Consensus 66 lr~~~~~~piI~lT~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~l~~ 118 (137)
T d1ny5a1 66 IKERSPETEVIVITGHGTIKTAVEAMKMGAYDFLTKPCMLEEIELTINKAIEH 118 (137)
T ss_dssp HHHHCTTSEEEEEEETTCHHHHHHHHTTTCCEEEEESCCHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCEEEEECCCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHH
Confidence 3 3568988632223444444444333334666678999999999887753
No 28
>d2pl1a1 c.23.1.1 (A:1-119) PhoP receiver domain {Escherichia coli [TaxId: 562]}
Probab=85.23 E-value=3.5 Score=26.99 Aligned_cols=69 Identities=13% Similarity=0.146 Sum_probs=38.5
Q ss_pred CCEEEEcCccCCCCCCCCHHHH---HhhCCcEEECCCCCChHHHHHHHHhcCCceEEEcCCHHHHHHHHHHhh
Q 043830 137 TPIAVIGGSFLPGLAGHNISEA---AAAGCAVLTGPHIGHYSNMVSAMQRLNPKSVLQVSGKSELEEALSQLF 206 (248)
Q Consensus 137 ad~~~v~~s~~e~~gg~~~lEA---~a~G~Pvi~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~l~~~i~~ll 206 (248)
-|++++--.. ++..|..+++. ....+|||+-....+.....+.+..+-.+++..|-+.++|.+.+..++
T Consensus 45 ~dliilD~~m-P~~~G~e~~~~i~~~~~~~pvi~lt~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~v~~~l 116 (119)
T d2pl1a1 45 PDIAIVDLGL-PDEDGLSLIRRWRSNDVSLPILVLTARESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALM 116 (119)
T ss_dssp CSEEEECSCC-SSSCHHHHHHHHHHTTCCSCEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHH
T ss_pred cceeehhccC-CCchhHHHHHHHHhcCcccceEeeeccCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHH
Confidence 3665552222 33334444443 345778886333334444444443323346667789999999998887
No 29
>d1qkka_ c.23.1.1 (A:) Transcriptional regulatory protein DctD, receiver domain {Sinorhizobium meliloti [TaxId: 382]}
Probab=84.21 E-value=4.4 Score=27.31 Aligned_cols=58 Identities=10% Similarity=0.066 Sum_probs=34.5
Q ss_pred CCCCCHHHHH---hhCCcEEECCCCCChHHHHHHHHhcCC-ceEEEcCCHHHHHHHHHHhhhC
Q 043830 150 LAGHNISEAA---AAGCAVLTGPHIGHYSNMVSAMQRLNP-KSVLQVSGKSELEEALSQLFSD 208 (248)
Q Consensus 150 ~gg~~~lEA~---a~G~Pvi~~~~~~~~~~~~~~~~~~g~-g~~~~~~~~~~l~~~i~~ll~~ 208 (248)
+.|..+++.+ .-.+|||+-...++.....+.+. .|. +++..|-+.++|..++.+.+..
T Consensus 57 ~~G~el~~~lr~~~~~~pvI~lT~~~~~~~~~~a~~-~Ga~dyl~KP~~~~~L~~~i~~~~~~ 118 (140)
T d1qkka_ 57 MDGLALFRKILALDPDLPMILVTGHGDIPMAVQAIQ-DGAYDFIAKPFAADRLVQSARRAEEK 118 (140)
T ss_dssp SCHHHHHHHHHHHCTTSCEEEEECGGGHHHHHHHHH-TTCCEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCCcEEEEECCCCHHHHHHHHH-cCCCEeecCCCCHHHHHHHHHHHHHH
Confidence 3455554443 45689997322234444444443 443 4555677999999999877743
No 30
>d1zpda1 c.31.1.3 (A:188-362) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]}
Probab=83.68 E-value=2.7 Score=29.68 Aligned_cols=81 Identities=7% Similarity=0.003 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHhCCCeEEEEecCCCC---CHHHHHHHHHhcCCceEEecccC--CCCCCccEE--EEcCh--hHHHHHH
Q 043830 64 KVMLAVHKVLMQKNPNLVTIIVPRHPQ---HGKEIAQKLQKEGEVVALRSRHE--KLMPRTNVY--VVDTL--GELRQLY 134 (248)
Q Consensus 64 ~~ll~a~~~l~~~~~~~~lvivG~~~~---~~~~l~~~~~~~~l~~~~~~~~~--~~~~~~~v~--~~~~~--~~l~~~y 134 (248)
+..++.+..+...-.. -++|+|.+-. -.+++.+++.++|++....+.+. .+....... +.+.. .....++
T Consensus 9 ~~~v~~~~~~l~~Akr-PvIi~G~g~~~~~a~~~l~~lae~~~~Pv~tt~~gkg~i~e~~p~~~G~~~G~~~~~~~~~~~ 87 (175)
T d1zpda1 9 NAAVDETLKFIANRDK-VAVLVGSKLRAAGAEEAAVKFTDALGGAVATMAAAKSFFPEENALYIGTSWGEVSYPGVEKTM 87 (175)
T ss_dssp HHHHHHHHHHHTTCSC-EEEEECTTTTTTTCHHHHHHHHHHHCCCEEEEGGGTTSSCTTSTTEEEEECGGGSCTTHHHHH
T ss_pred HHHHHHHHHHHHcCCC-EEEEECcCccccchHHHHHHHHHhhceeEEeccccccCCCcccccccCCcccccchHHHHHHH
Confidence 3444444433332222 3677887643 24789999999999876655432 221122221 12322 3568889
Q ss_pred hhCCEEEEcCc
Q 043830 135 KLTPIAVIGGS 145 (248)
Q Consensus 135 ~~ad~~~v~~s 145 (248)
..||++++.++
T Consensus 88 ~~aDlvl~lG~ 98 (175)
T d1zpda1 88 KEADAVIALAP 98 (175)
T ss_dssp HHCSEEEEESC
T ss_pred hcCceEEEEcC
Confidence 99999887554
No 31
>d2a9pa1 c.23.1.1 (A:2-118) DNA-binding response regulator MicA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=83.13 E-value=4.3 Score=26.38 Aligned_cols=69 Identities=13% Similarity=0.176 Sum_probs=36.8
Q ss_pred CCEEEEcCccCCCCCCCCHHHHH--hhCCcEEECCCCCChHHHHHHHHhcCCceEEEcCCHHHHHHHHHHhh
Q 043830 137 TPIAVIGGSFLPGLAGHNISEAA--AAGCAVLTGPHIGHYSNMVSAMQRLNPKSVLQVSGKSELEEALSQLF 206 (248)
Q Consensus 137 ad~~~v~~s~~e~~gg~~~lEA~--a~G~Pvi~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~l~~~i~~ll 206 (248)
-|++++--.. ++..|..+++.+ ...+|||+-............+..+..+++..|-++++|...|..++
T Consensus 45 ~dlillD~~m-p~~~G~~~~~~i~~~~~~pvI~lt~~~~~~~~~~a~~~Ga~d~l~KP~~~~~L~~~i~~~l 115 (117)
T d2a9pa1 45 PDIIILDLML-PEIDGLEVAKTIRKTSSVPILMLSAKDSEFDKVIGLELGADDYVTKPFSNRELQARVKALL 115 (117)
T ss_dssp CSEEEECSSC-SSSCHHHHHHHHHTTCCCCEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHH
T ss_pred CCEEEecccc-CCCCccHHHHHHHhCCCCCEEEEecCCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHh
Confidence 4555442222 222344444444 34578885222223333333333333346666789999999998776
No 32
>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}
Probab=83.10 E-value=4.1 Score=26.79 Aligned_cols=69 Identities=13% Similarity=0.111 Sum_probs=37.1
Q ss_pred CCEEEEcCccCCCCCCCCHHHHH---hhCCcEEECCCCCChHHHHHHHHhcCC-ceEEEcCCHHHHHHHHHHhhh
Q 043830 137 TPIAVIGGSFLPGLAGHNISEAA---AAGCAVLTGPHIGHYSNMVSAMQRLNP-KSVLQVSGKSELEEALSQLFS 207 (248)
Q Consensus 137 ad~~~v~~s~~e~~gg~~~lEA~---a~G~Pvi~~~~~~~~~~~~~~~~~~g~-g~~~~~~~~~~l~~~i~~ll~ 207 (248)
-|++++--. -++..|..+++.+ ...+|||+-...++.....+.+ +.|. +++..|-+.++|...+.+.++
T Consensus 48 ~dlii~D~~-mp~~~G~el~~~l~~~~~~~piI~~t~~~~~~~~~~a~-~~Ga~dyl~KP~~~~eL~~~i~~~l~ 120 (123)
T d1krwa_ 48 PDVLLSDIR-MPGMDGLALLKQIKQRHPMLPVIIMTAHSDLDAAVSAY-QQGAFDYLPKPFDIDEAVALVERAIS 120 (123)
T ss_dssp CSEEEECCS-SSSSTTHHHHHHHHHHSSSCCEEESCCCSCHHHHHHHH-HHTEEEECSSCCHHHHHHHHHHHHHH
T ss_pred CCEEEehhh-cCCchHHHHHHHHHHhCCCCeEEEEecCCCHHHHHHHH-HcCCCeEEeCcCCHHHHHHHHHHHHH
Confidence 456544211 1333355554443 4568999744443444444433 3442 233445788999888887764
No 33
>d1kgsa2 c.23.1.1 (A:2-123) PhoB receiver domain {Thermotoga maritima [TaxId: 2336]}
Probab=82.85 E-value=2.4 Score=27.96 Aligned_cols=111 Identities=14% Similarity=0.108 Sum_probs=56.5
Q ss_pred CeEEEEecCCCCCHHHHHHHHHhcCCceEEecccCCCCCCccEEEEcChhH-HHHHH-hhCCEEEEcCccCCCCCCCCHH
Q 043830 79 NLVTIIVPRHPQHGKEIAQKLQKEGEVVALRSRHEKLMPRTNVYVVDTLGE-LRQLY-KLTPIAVIGGSFLPGLAGHNIS 156 (248)
Q Consensus 79 ~~~lvivG~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~-l~~~y-~~ad~~~v~~s~~e~~gg~~~l 156 (248)
|++++||=+.+.....+...++..|..... ...-.+ +..+- ..-|++++--.. ++..|..++
T Consensus 1 nirILiVdDd~~~~~~l~~~L~~~g~~v~~---------------a~~~~~al~~l~~~~~dlillD~~m-p~~~g~~~~ 64 (122)
T d1kgsa2 1 NVRVLVVEDERDLADLITEALKKEMFTVDV---------------CYDGEEGMYMALNEPFDVVILDIML-PVHDGWEIL 64 (122)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHTTCEEEE---------------ESSHHHHHHHHHHSCCSEEEEESCC-SSSCHHHHH
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHCCCEEEE---------------EcchHHHHHHHHhhCcccccccccc-ccchhHHHH
Confidence 467777776555445566666666654321 111112 22221 224675552222 333344444
Q ss_pred HH---HhhCCcEEECCCCCChHHHHHHHHhcCC-ceEEEcCCHHHHHHHHHHhh
Q 043830 157 EA---AAAGCAVLTGPHIGHYSNMVSAMQRLNP-KSVLQVSGKSELEEALSQLF 206 (248)
Q Consensus 157 EA---~a~G~Pvi~~~~~~~~~~~~~~~~~~g~-g~~~~~~~~~~l~~~i~~ll 206 (248)
+. .....|||+-... +-.+......+.|. +++..|-+.++|...|..++
T Consensus 65 ~~lr~~~~~~piI~lt~~-~~~~~~~~~~~~Ga~~yl~KP~~~~~L~~~i~~~l 117 (122)
T d1kgsa2 65 KSMRESGVNTPVLMLTAL-SDVEYRVKGLNMGADDYLPKPFDLRELIARVRALI 117 (122)
T ss_dssp HHHHHTTCCCCEEEEESS-CHHHHHHHTCCCCCSEEEESSCCHHHHHHHHHHHH
T ss_pred HHHHhcCCCCcEEEEcCC-CCHHHHHHHHHcCCceeecCCCCHHHHHHHHHHHH
Confidence 44 3356788863222 22222222223332 35566789999999998776
No 34
>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}
Probab=82.59 E-value=4.6 Score=26.33 Aligned_cols=68 Identities=13% Similarity=0.236 Sum_probs=38.0
Q ss_pred CCEEEEcCccCCCCCCCCHHHHH---hhCCcEEECCCCCChHHHHHHHHhcC-CceEEEcCCHHHHHHHHHHhh
Q 043830 137 TPIAVIGGSFLPGLAGHNISEAA---AAGCAVLTGPHIGHYSNMVSAMQRLN-PKSVLQVSGKSELEEALSQLF 206 (248)
Q Consensus 137 ad~~~v~~s~~e~~gg~~~lEA~---a~G~Pvi~~~~~~~~~~~~~~~~~~g-~g~~~~~~~~~~l~~~i~~ll 206 (248)
-|++++--.. ++..|..++..+ .-.+|||+-...++.....+.. +.| .+++..|-+.++|.+++.++|
T Consensus 46 ~dlillD~~m-P~~~G~el~~~lr~~~~~~pvi~lt~~~~~~~~~~a~-~~Ga~~yl~KP~~~~~L~~~v~~~L 117 (119)
T d1peya_ 46 PDLVLLDMKI-PGMDGIEILKRMKVIDENIRVIIMTAYGELDMIQESK-ELGALTHFAKPFDIDEIRDAVKKYL 117 (119)
T ss_dssp CSEEEEESCC-TTCCHHHHHHHHHHHCTTCEEEEEESSCCHHHHHHHH-HTTCCEEEESSCCHHHHHHHHHHHS
T ss_pred CCEEEEeccC-CCCCHHHHHHHHHHhCCCCcEEEEecCCCHHHHHHHH-HCCCCEEEECCCCHHHHHHHHHHHC
Confidence 3565542222 333454444433 4568888632223443344333 333 346666789999999998876
No 35
>d1s8na_ c.23.1.1 (A:) Probable two-component system transcriptional regulator Rv1626 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=81.65 E-value=6.7 Score=27.71 Aligned_cols=71 Identities=11% Similarity=0.139 Sum_probs=39.4
Q ss_pred CCEEEEcCccCCCCCCCCHHHHHh--hCCcEEECCCCCChHHHHHHHHhcCC-ceEEEcCCHHHHHHHHHHhhhCH
Q 043830 137 TPIAVIGGSFLPGLAGHNISEAAA--AGCAVLTGPHIGHYSNMVSAMQRLNP-KSVLQVSGKSELEEALSQLFSDA 209 (248)
Q Consensus 137 ad~~~v~~s~~e~~gg~~~lEA~a--~G~Pvi~~~~~~~~~~~~~~~~~~g~-g~~~~~~~~~~l~~~i~~ll~~~ 209 (248)
-|++++--. .+++.|..+++.+. .-+|||+-...+.. +......+.|. +++..|-++++|..+|...+...
T Consensus 49 pDlvllDi~-mP~~dG~e~~~~ir~~~~~pIi~lTa~~~~-~~~~~al~~Ga~~yl~KP~~~~~L~~~i~~~~~~~ 122 (190)
T d1s8na_ 49 PDLVIMDVK-MPRRDGIDAASEIASKRIAPIVVLTAFSQR-DLVERARDAGAMAYLVKPFSISDLIPAIELAVSRF 122 (190)
T ss_dssp CSEEEEESS-CSSSCHHHHHHHHHHTTCSCEEEEEEGGGH-HHHHTTGGGSCEEEEEESCCHHHHHHHHHHHHHHH
T ss_pred CCEEEEecc-ccCcchHHHHHHHHhcCCCCEEEEeCCCCH-HHHHHHHHcCCCEeccCCCCHHHHHHHHHHHHHhh
Confidence 456544211 13334555666554 45788863222222 33333334443 46677789999999998877543
No 36
>d1ovma1 c.31.1.3 (A:181-341) Indole-3-pyruvate decarboxylase {Enterobacter cloacae [TaxId: 550]}
Probab=81.08 E-value=3.1 Score=28.93 Aligned_cols=81 Identities=6% Similarity=-0.017 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEecCCC---CCHHHHHHHHHhcCCceEEecccC--CCCCCccEEE---EcC--hhHHHH
Q 043830 63 EKVMLAVHKVLMQKNPNLVTIIVPRHP---QHGKEIAQKLQKEGEVVALRSRHE--KLMPRTNVYV---VDT--LGELRQ 132 (248)
Q Consensus 63 ~~~ll~a~~~l~~~~~~~~lvivG~~~---~~~~~l~~~~~~~~l~~~~~~~~~--~~~~~~~v~~---~~~--~~~l~~ 132 (248)
.+.++++...+.+.-.. -++|+|.+- ...+++.+++++++++....+.+. .+ ++..-|+ .+. .....+
T Consensus 15 l~a~~~~a~~~l~~Akr-P~il~G~gv~~~~a~~~l~~l~e~~~iPv~tt~~gkg~i~-e~~p~~~G~~~G~~~~~~~~~ 92 (161)
T d1ovma1 15 LKAFRDAAENKLAMSKR-TALLADFLVLRHGLKHALQKWVKEVPMAHATMLMGKGIFD-ERQAGFYGTYSGSASTGAVKE 92 (161)
T ss_dssp HHHHHHHHHHHHHTCSC-EEEEECHHHHHTTCHHHHHHHHHHSCCEEEECGGGTTSSC-TTSTTCCCCCCGGGSCHHHHH
T ss_pred HHHHHHHHHHHHHcCCC-cEEEECcCcChhhhHHHHHHHHHhcCccEEEcCCcCCccc-ccccccccccCCCcCcHHHHH
Confidence 44556544444333222 267777642 234789999999999876655432 22 1122121 121 235678
Q ss_pred HHhhCCEEEEcCc
Q 043830 133 LYKLTPIAVIGGS 145 (248)
Q Consensus 133 ~y~~ad~~~v~~s 145 (248)
++..||++++.++
T Consensus 93 ~i~~aDliL~iG~ 105 (161)
T d1ovma1 93 AIEGADTVLCVGT 105 (161)
T ss_dssp HHHTSSEEEEESC
T ss_pred HHhcCCEEEEECC
Confidence 8999999877544
No 37
>d1p2fa2 c.23.1.1 (A:1-120) Response regulator DrrB {Thermotoga maritima [TaxId: 2336]}
Probab=79.83 E-value=5.2 Score=26.10 Aligned_cols=70 Identities=10% Similarity=0.100 Sum_probs=40.2
Q ss_pred CCEEEEcCccCCCCCCCCHHHHHh---hCCcEEECCCCCChHHHHHHHHhcCCceEEEcCCHHHHHHHHHHhhh
Q 043830 137 TPIAVIGGSFLPGLAGHNISEAAA---AGCAVLTGPHIGHYSNMVSAMQRLNPKSVLQVSGKSELEEALSQLFS 207 (248)
Q Consensus 137 ad~~~v~~s~~e~~gg~~~lEA~a---~G~Pvi~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~l~~~i~~ll~ 207 (248)
-|++++--.. ++..|..+++-+- ...|||+-...++.....+.+..+..+++..|-++++|..++.+++.
T Consensus 44 ~dlillD~~m-P~~~G~~~~~~lr~~~~~~~ii~it~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~l~ 116 (120)
T d1p2fa2 44 FHVVVLDVML-PDYSGYEICRMIKETRPETWVILLTLLSDDESVLKGFEAGADDYVTKPFNPEILLARVKRFLE 116 (120)
T ss_dssp CSEEEEESBC-SSSBHHHHHHHHHHHCTTSEEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred CCEEEEeCcc-cccchhHHHHHHhhcCCCCcEEEEecCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
Confidence 4665542222 3334555555433 57888863223344344444443333566777899999999988773
No 38
>d2ihta1 c.31.1.3 (A:198-374) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]}
Probab=78.79 E-value=1.5 Score=31.18 Aligned_cols=117 Identities=9% Similarity=0.012 Sum_probs=61.5
Q ss_pred EEEecCC---CCCHHHHHHHHHhcCCceEEecccC-CCCCCccEEEEcC---------hhHHHHHHhhCCEEEEcCccCC
Q 043830 82 TIIVPRH---PQHGKEIAQKLQKEGEVVALRSRHE-KLMPRTNVYVVDT---------LGELRQLYKLTPIAVIGGSFLP 148 (248)
Q Consensus 82 lvivG~~---~~~~~~l~~~~~~~~l~~~~~~~~~-~~~~~~~v~~~~~---------~~~l~~~y~~ad~~~v~~s~~e 148 (248)
++|+|.+ ..-.+++.+++++++++......+. ..+.+..-++... ......++..||++++.++...
T Consensus 23 vii~G~g~~~~~a~~~l~~lae~~~iPv~~t~~~kg~~p~~hp~~~G~~~~~~~G~~~~~~~~~~l~~aDlvl~vG~~~~ 102 (177)
T d2ihta1 23 VLVVGAAAIRSGAVPAIRALAERLNIPVITTYIAKGVLPVGHELNYGAVTGYMDGILNFPALQTMFAPVDLVLTVGYDYA 102 (177)
T ss_dssp EEEECHHHHHTTCHHHHHHHHHHHTCCEEECSTTTTSSCTTCTTEEEECCTTHHHHHTSCHHHHHHTTCCEEEEETCCGG
T ss_pred EEEECcCcchhhhHHHHHHHhhcceEEEEeccccccCCCCcccceeeeeeeccccccccHHHHHHhccCCceEEeccccc
Confidence 6788864 2345789999999999865444432 1112222233211 1245678999999887655321
Q ss_pred CCCCCC-HHHHHhhCCcEEE-CCCCCChHHHHHHHHhcCCceEEEcCCHHHHHHHHHHhhh
Q 043830 149 GLAGHN-ISEAAAAGCAVLT-GPHIGHYSNMVSAMQRLNPKSVLQVSGKSELEEALSQLFS 207 (248)
Q Consensus 149 ~~gg~~-~lEA~a~G~Pvi~-~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~l~~~i~~ll~ 207 (248)
. ..+ -.....-...+|. ..+...+. .....-+-...|+....+++...+.
T Consensus 103 ~--~~~~~~~~~~~~~k~I~Id~d~~~i~-------~~~~~~~~i~gD~~~~l~~L~~~l~ 154 (177)
T d2ihta1 103 E--DLRPSMWQKGIEKKTVRISPTVNPIP-------RVYRPDVDVVTDVLAFVEHFETATA 154 (177)
T ss_dssp G--CCCHHHHCCSSCCEEEEEESSCCSCT-------TTCCCSEEEESCHHHHHHHHHHHTT
T ss_pred c--cccccccccCCccceeEEcCCHHHhC-------CccCCCeEEEeCHHHHHHHHHHHhh
Confidence 1 122 2334444566773 22221110 1111023345788887777766664
No 39
>d1pvda1 c.31.1.3 (A:182-360) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=78.47 E-value=4.1 Score=28.80 Aligned_cols=65 Identities=12% Similarity=0.103 Sum_probs=40.0
Q ss_pred EEEecCCCC---CHHHHHHHHHhcCCceEEecccC-CCCCCccEEE---EcCh--hHHHHHHhhCCEEEEcCcc
Q 043830 82 TIIVPRHPQ---HGKEIAQKLQKEGEVVALRSRHE-KLMPRTNVYV---VDTL--GELRQLYKLTPIAVIGGSF 146 (248)
Q Consensus 82 lvivG~~~~---~~~~l~~~~~~~~l~~~~~~~~~-~~~~~~~v~~---~~~~--~~l~~~y~~ad~~~v~~s~ 146 (248)
++|+|.+-. -.+++.++++++|++......+. ....+..-|+ .+.. .....++..||++++.++.
T Consensus 34 vii~G~g~~~~~a~~~l~~lae~~~~Pv~tt~~gkg~~~e~hp~~~G~~~g~~~~~~~~~~~~~aDlvl~lG~~ 107 (179)
T d1pvda1 34 VILADACCSRHDVKAETKKLIDLTQFPAFVTPMGKGSISEQHPRYGGVYVGTLSKPEVKEAVESADLILSVGAL 107 (179)
T ss_dssp EEEECGGGTTTSTHHHHHHHHHHHCCCEEECGGGTTSSCTTSTTEEEECCSTTSCHHHHHHHHTCSEEEEESCC
T ss_pred EEEEecccchhhhHHHHHHHHHhhCceEEecccccccccccccccccccccccCCHHHHHHhhcCCEEEEEcCC
Confidence 678887543 24788899999999865544432 1111222222 2322 3577889999998886653
No 40
>d1qo0d_ c.23.1.3 (D:) Positive regulator of the amidase operon AmiR {Pseudomonas aeruginosa [TaxId: 287]}
Probab=78.36 E-value=8.7 Score=26.85 Aligned_cols=114 Identities=6% Similarity=-0.076 Sum_probs=64.1
Q ss_pred CCeEEEEecCCCCCHHHHHHHHHhcCCceEEecccCCCCCCccEEEEcChhHHHHHHhhCCEEEEcCccCCCCCCCCH--
Q 043830 78 PNLVTIIVPRHPQHGKEIAQKLQKEGEVVALRSRHEKLMPRTNVYVVDTLGELRQLYKLTPIAVIGGSFLPGLAGHNI-- 155 (248)
Q Consensus 78 ~~~~lvivG~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~y~~ad~~~v~~s~~e~~gg~~~-- 155 (248)
.+++++||=+.+.....+...++..|........+.. .+ =...|++++--. -++.+|...
T Consensus 10 ~~~~iLvvdd~~~~~~~l~~~L~~~G~~v~~~~~~~~--------------al---~~~~Dlvl~D~~-mp~~~~~~~~~ 71 (189)
T d1qo0d_ 10 RELQVLVLNPPGEVSDALVLQLIRIGCSVRQCWPPPE--------------AF---DVPVDVVFTSIF-QNRHHDEIAAL 71 (189)
T ss_dssp GGCEEEEESCTTHHHHHHHHHHHHHTCEEEEECSCCS--------------SC---SSCCSEEEEECC-SSTHHHHHHHH
T ss_pred cCCEEEEEeCCHHHHHHHHHHHHHcCCcceecCCHHH--------------hc---cCCCCEEEEcCC-CCCcHHHHHHH
Confidence 4678888877666557888888898987544333211 11 124677655211 122111111
Q ss_pred HHHHhhCCcEEECCCCCChHHHHHHHHhcCCceEEEcCCHHHHHHHHHHhhhCH
Q 043830 156 SEAAAAGCAVLTGPHIGHYSNMVSAMQRLNPKSVLQVSGKSELEEALSQLFSDA 209 (248)
Q Consensus 156 lEA~a~G~Pvi~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~l~~~i~~ll~~~ 209 (248)
.-.-.-.+|||+-...++.....+.+..+..+++..|-+.++|..+|...+...
T Consensus 72 ~~~~~p~~pvI~lta~~~~~~~~~al~~Ga~~yL~KP~~~~~L~~~i~~~~~~~ 125 (189)
T d1qo0d_ 72 LAAGTPRTTLVALVEYESPAVLSQIIELECHGVITQPLDAHRVLPVLVSARRIS 125 (189)
T ss_dssp HHHSCTTCEEEEEECCCSHHHHHHHHHHTCSEEEESSCCGGGHHHHHHHHHHHH
T ss_pred HHHcCCCCCEEEEeccchHHHHHHHHHcCCcEEEEecchhhHHHHHHhhccccc
Confidence 111233478886322235544555554444456777789999999998776543
No 41
>d1t35a_ c.129.1.1 (A:) Hypothetical protein YvdD {Bacillus subtilis [TaxId: 1423]}
Probab=77.77 E-value=9.4 Score=26.94 Aligned_cols=79 Identities=14% Similarity=0.041 Sum_probs=43.8
Q ss_pred EEEcCh-hHHHHHHhhCCEEEEcCccCCCCCCC-CHHHHHhhC------CcEEECCCCCChHHHH---HHHHhcCC----
Q 043830 122 YVVDTL-GELRQLYKLTPIAVIGGSFLPGLAGH-NISEAAAAG------CAVLTGPHIGHYSNMV---SAMQRLNP---- 186 (248)
Q Consensus 122 ~~~~~~-~~l~~~y~~ad~~~v~~s~~e~~gg~-~~lEA~a~G------~Pvi~~~~~~~~~~~~---~~~~~~g~---- 186 (248)
+.+.++ .....++..||.+++.|. |+|.+ -++|++... +||++-+..+-+.... +.+.+.|.
T Consensus 82 ~~~~~~~~Rk~~m~~~sdafI~lPG---G~GTLdEl~e~l~~~ql~~~~kPiil~n~~gfw~~l~~~l~~~~~~gfi~~~ 158 (179)
T d1t35a_ 82 IEVNGMHERKAKMSELADGFISMPG---GFGTYEELFEVLCWAQIGIHQKPIGLYNVNGYFEPMMKMVKYSIQEGFSNES 158 (179)
T ss_dssp EEESHHHHHHHHHHHHCSEEEECSC---CHHHHHHHHHHHHTTSCSSCCCCEEEECGGGTTHHHHHHHHHHHHTTSSCTT
T ss_pred eeeccHHHHHHHHHHhcCeEEEecC---ccchhhHHHHHHHHHHhhccCCCeEeecCCccHHHHHHHHHHHHHcCCCChH
Confidence 344443 345677888999877542 12112 268888775 8999854333344333 33433331
Q ss_pred --ceEEEcCCHHHHHHHHH
Q 043830 187 --KSVLQVSGKSELEEALS 203 (248)
Q Consensus 187 --g~~~~~~~~~~l~~~i~ 203 (248)
-....++|++++.+.|.
T Consensus 159 ~~~~i~~~~~~~e~i~~L~ 177 (179)
T d1t35a_ 159 HLKLIHSSSRPDELIEQMQ 177 (179)
T ss_dssp HHHHEEEESSHHHHHHHHH
T ss_pred HhCcEEEeCCHHHHHHHHH
Confidence 02344678888776654
No 42
>d2ayxa1 c.23.1.1 (A:817-949) Sensor kinase protein RcsC, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=77.23 E-value=7.8 Score=25.70 Aligned_cols=112 Identities=10% Similarity=0.113 Sum_probs=57.6
Q ss_pred CCeEEEEecCCCCCHHHHHHHHHhcCCceEEecccCCCCCCccEEEEcChhHHHHHHh--hCCEEEEcCccCCCCCCCCH
Q 043830 78 PNLVTIIVPRHPQHGKEIAQKLQKEGEVVALRSRHEKLMPRTNVYVVDTLGELRQLYK--LTPIAVIGGSFLPGLAGHNI 155 (248)
Q Consensus 78 ~~~~lvivG~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~y~--~ad~~~v~~s~~e~~gg~~~ 155 (248)
.+++++||-+.+.....+.+.++..|.... ....-.+--+++. .-|++++--.. ++..|..+
T Consensus 7 ~~~~ILiVDD~~~~~~~l~~~L~~~g~~v~---------------~a~~g~ea~~~~~~~~~dlillD~~m-P~~dG~el 70 (133)
T d2ayxa1 7 DDMMILVVDDHPINRRLLADQLGSLGYQCK---------------TANDGVDALNVLSKNHIDIVLSDVNM-PNMDGYRL 70 (133)
T ss_dssp CCCEEEEEESSHHHHHHHHHHHHHHTSEEE---------------EECCSHHHHHHHHHSCCSEEEEEESS-CSSCCHHH
T ss_pred CCCEEEEEECCHHHHHHHHHHHHHcCCEEE---------------EECcHHHHHHHHhccCceEEEEeccC-CCCCHHHH
Confidence 456777777665544556666666665421 1111112212221 24665552222 33346556
Q ss_pred HHHH---hhCCcEEECCCCCChHHHHHHHHhcCC-ceEEEcCCHHHHHHHHHHhh
Q 043830 156 SEAA---AAGCAVLTGPHIGHYSNMVSAMQRLNP-KSVLQVSGKSELEEALSQLF 206 (248)
Q Consensus 156 lEA~---a~G~Pvi~~~~~~~~~~~~~~~~~~g~-g~~~~~~~~~~l~~~i~~ll 206 (248)
++.+ ...+||++-...+....... ..+.|. +++..|-+.+.|.+.+..++
T Consensus 71 ~~~ir~~~~~~pii~lt~~~~~~~~~~-~~~~G~~~~l~KP~~~~~L~~~l~~~~ 124 (133)
T d2ayxa1 71 TQRIRQLGLTLPVIGVTANALAEEKQR-CLESGMDSCLSKPVTLDVIKQTLTLYA 124 (133)
T ss_dssp HHHHHHHHCCSCEEEEESSTTSHHHHH-HHHCCCEEEEESSCCHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCEEEEeccCCHHHHHH-HHHcCCCEEEECCCCHHHHHHHHHHHH
Confidence 5554 44678875222223333333 334443 35556679999999887776
No 43
>d1w25a2 c.23.1.1 (A:141-293) Response regulator PleD, receiver domain {Caulobacter crescentus [TaxId: 155892]}
Probab=76.83 E-value=8.9 Score=26.15 Aligned_cols=56 Identities=16% Similarity=0.154 Sum_probs=34.2
Q ss_pred CCCCHHHHH-----hhCCcEEECCCCCChHHHHHHHHhcCC-ceEEEcCCHHHHHHHHHHhhh
Q 043830 151 AGHNISEAA-----AAGCAVLTGPHIGHYSNMVSAMQRLNP-KSVLQVSGKSELEEALSQLFS 207 (248)
Q Consensus 151 gg~~~lEA~-----a~G~Pvi~~~~~~~~~~~~~~~~~~g~-g~~~~~~~~~~l~~~i~~ll~ 207 (248)
.|..+++.+ ...+|||+-...++.......+ +.|. +++..|-++++|...|..++.
T Consensus 69 dG~el~~~ir~~~~~~~iPiI~lt~~~~~~~~~~a~-~~Ga~d~l~KP~~~~~L~~~i~~~l~ 130 (153)
T d1w25a2 69 DGLRFTAALRSEERTRQLPVLAMVDPDDRGRMVKAL-EIGVNDILSRPIDPQELSARVKTQIQ 130 (153)
T ss_dssp CHHHHHHHHHTSGGGTTCCEEEEECTTCHHHHHHHH-HTTCCEEEESSCCHHHHHHHHHHHHH
T ss_pred cchHHHHHHHhccccccceeEEeecCCCHHHHHHHH-hcCcceEEECCCCHHHHHHHHHHHHH
Confidence 455565554 3468998632223443444434 3333 466677899999999988774
No 44
>d1a04a2 c.23.1.1 (A:5-142) Nitrate/nitrite response regulator (NarL), receiver domain {Escherichia coli [TaxId: 562]}
Probab=76.50 E-value=8.3 Score=25.66 Aligned_cols=70 Identities=17% Similarity=0.222 Sum_probs=38.3
Q ss_pred CCEEEEcCccCCCCCCCCHHHHHh---hCCcEEECCCCCChHHHHHHHHhcCCceEEEcCCHHHHHHHHHHhhh
Q 043830 137 TPIAVIGGSFLPGLAGHNISEAAA---AGCAVLTGPHIGHYSNMVSAMQRLNPKSVLQVSGKSELEEALSQLFS 207 (248)
Q Consensus 137 ad~~~v~~s~~e~~gg~~~lEA~a---~G~Pvi~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~l~~~i~~ll~ 207 (248)
-|++++--.. ++..|..+++.+- ..+|+|+-....+.....+.+..+..|++..+-++++|.++|.+.+.
T Consensus 49 ~DlvllD~~m-P~~~G~el~~~ir~~~~~~~vivlt~~~~~~~~~~a~~~Ga~~yl~Kp~~~~~L~~~i~~v~~ 121 (138)
T d1a04a2 49 PDLILLDLNM-PGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 121 (138)
T ss_dssp CSEEEEETTS-TTSCHHHHHHHHHHSCCCSEEEEEECCCCHHHHHHHHHTTCSEEEETTCCHHHHHHHHHHHHH
T ss_pred CCEEEEecCC-CCCCHHHHHHHHHhhCCCCCEEEEEEECCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHC
Confidence 5675552222 3334555555543 35666652122233334444433333566667899999999987764
No 45
>d2ez9a1 c.31.1.3 (A:183-365) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]}
Probab=75.65 E-value=11 Score=26.59 Aligned_cols=117 Identities=10% Similarity=0.043 Sum_probs=61.0
Q ss_pred EEEecCCCC-CHHHHHHHHHhcCCceEEecccCCCCCCccEEEEc---C--hhHHHHHHhhCCEEEEcCccCCCCCCCCH
Q 043830 82 TIIVPRHPQ-HGKEIAQKLQKEGEVVALRSRHEKLMPRTNVYVVD---T--LGELRQLYKLTPIAVIGGSFLPGLAGHNI 155 (248)
Q Consensus 82 lvivG~~~~-~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~---~--~~~l~~~y~~ad~~~v~~s~~e~~gg~~~ 155 (248)
++|+|.|-. -.+++.++++.+|++......+.-..+..+-++.| . ......++..||++++.++.... .+.
T Consensus 34 vii~G~G~~~a~~~l~~lae~~~~Pv~tt~~~~g~~~~~hp~~~G~~G~~~~~~~~~~i~~aDlil~vG~~l~~---~~~ 110 (183)
T d2ez9a1 34 LIYYGIGARKAGKELEQLSKTLKIPLMSTYPAKGIVADRYPAYLGSANRVAQKPANEALAQADVVLFVGNNYPF---AEV 110 (183)
T ss_dssp EEEECGGGTTCHHHHHHHHHHHTCCEEECGGGTTSSCTTCTTBCCCCSSSSCHHHHHHHHHCSEEEEESCCCTT---TTT
T ss_pred EEEEcCCcccchHHHHHHhhccceEEEeeccccccccccCccccccccccccHHHHhhhhccCceEEeecccCc---ccc
Confidence 567776533 23568888888888754433321111111212222 1 13567889999998876654321 122
Q ss_pred HHHHhhCCcEEE-CCCCCChHHHHHHHHhcCCceEEEcCCHHHHHHHHHHhhhC
Q 043830 156 SEAAAAGCAVLT-GPHIGHYSNMVSAMQRLNPKSVLQVSGKSELEEALSQLFSD 208 (248)
Q Consensus 156 lEA~a~G~Pvi~-~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~l~~~i~~ll~~ 208 (248)
...+.-+..+|. ..+.. + +......-+-.+.|+....+.|...+++
T Consensus 111 ~~~~~~~~~iI~Id~d~~---~----i~~~~~~~~~i~~D~~~~l~~L~~~l~~ 157 (183)
T d2ez9a1 111 SKAFKNTRYFLQIDIDPA---K----LGKRHKTDIAVLADAQKTLAAILAQVSE 157 (183)
T ss_dssp TTTTTTCSEEEEEESCGG---G----TTSSSCCSEEEESCHHHHHHHHHHTCCC
T ss_pred eeecccccchheeeccHH---H----HhhcCCCCeEEEECHHHHHHHHHHHhhh
Confidence 233455677884 22211 1 1111111234457888888888777754
No 46
>d1yioa2 c.23.1.1 (A:3-130) Response regulatory protein StyR, N-terminal domain {Pseudomonas fluorescens [TaxId: 294]}
Probab=75.49 E-value=3.5 Score=27.27 Aligned_cols=24 Identities=13% Similarity=-0.036 Sum_probs=18.2
Q ss_pred eEEEcCCHHHHHHHHHHhhhCHHH
Q 043830 188 SVLQVSGKSELEEALSQLFSDARV 211 (248)
Q Consensus 188 ~~~~~~~~~~l~~~i~~ll~~~~~ 211 (248)
++..|-+.++|.+.+.+.++....
T Consensus 100 yl~KP~~~~~L~~~i~~~l~~~~~ 123 (128)
T d1yioa2 100 FLPKPFEEQALLDAIEQGLQLNAE 123 (128)
T ss_dssp EEESSCCHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCHHHHHHHHHHHHHHHHH
Confidence 556668999999999988864433
No 47
>d1mb3a_ c.23.1.1 (A:) Cell division response regulator DivK {Caulobacter crescentus [TaxId: 155892]}
Probab=74.62 E-value=8.6 Score=24.94 Aligned_cols=69 Identities=9% Similarity=0.133 Sum_probs=34.8
Q ss_pred CCEEEEcCccCCCCCCCCHHHHHh-----hCCcEEECCCCCChHHHHHHHHhcC-CceEEEcCCHHHHHHHHHHhhh
Q 043830 137 TPIAVIGGSFLPGLAGHNISEAAA-----AGCAVLTGPHIGHYSNMVSAMQRLN-PKSVLQVSGKSELEEALSQLFS 207 (248)
Q Consensus 137 ad~~~v~~s~~e~~gg~~~lEA~a-----~G~Pvi~~~~~~~~~~~~~~~~~~g-~g~~~~~~~~~~l~~~i~~ll~ 207 (248)
-|++++--.. ++..|..+++.+- ..+|||+-...+...... ...+.| .+++..|-+.++|.+.+..+++
T Consensus 46 ~dlil~D~~m-p~~dG~el~~~ir~~~~~~~iPii~lt~~~~~~~~~-~~~~~G~~~~l~KP~~~~~L~~~i~~~l~ 120 (123)
T d1mb3a_ 46 PDLILMDIQL-PEISGLEVTKWLKEDDDLAHIPVVAVTAFAMKGDEE-RIREGGCEAYISKPISVVHFLETIKRLLE 120 (123)
T ss_dssp CSEEEEESBC-SSSBHHHHHHHHHHSTTTTTSCEEEEC------CHH-HHHHHTCSEEECSSCCHHHHHHHHHHHHS
T ss_pred CCEEEEEecc-CCCcHHHHHHHHHhCCCcCCCCeEEEEEecCHHHHH-HHHHcCCCEEEECCCCHHHHHHHHHHHHh
Confidence 4555442222 3334555655553 456988622111111112 222233 2355556799999999998875
No 48
>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}
Probab=72.75 E-value=8 Score=23.81 Aligned_cols=33 Identities=18% Similarity=0.212 Sum_probs=23.8
Q ss_pred HHHhhCCEEEEcCccCCCCCCCCHHHHHhhCCcEE
Q 043830 132 QLYKLTPIAVIGGSFLPGLAGHNISEAAAAGCAVL 166 (248)
Q Consensus 132 ~~y~~ad~~~v~~s~~e~~gg~~~lEA~a~G~Pvi 166 (248)
......|+++++|.+-+. -..+.+|...|+|||
T Consensus 60 ~~~~~~d~vi~SPGi~~~--~~~~~~a~~~gi~ii 92 (93)
T d2jfga1 60 EWLMAADLIVASPGIALA--HPSLSAAADAGIEIV 92 (93)
T ss_dssp HHHHHCSEEEECTTSCTT--SHHHHHHHHTTCEEE
T ss_pred hhhccCCEEEECCCCCCC--CHHHHHHHHcCCCeE
Confidence 345778998888776431 123689999999998
No 49
>d1dcfa_ c.23.1.2 (A:) Receiver domain of the ethylene receptor {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=72.22 E-value=11 Score=24.98 Aligned_cols=112 Identities=13% Similarity=0.106 Sum_probs=55.9
Q ss_pred CeEEEEecCCCCCHHHHHHHHHhcCCceEEecccCCCCCCccEEEEcChhHHHHHHhhCCEEEEcCccCCCCCCCCHHHH
Q 043830 79 NLVTIIVPRHPQHGKEIAQKLQKEGEVVALRSRHEKLMPRTNVYVVDTLGELRQLYKLTPIAVIGGSFLPGLAGHNISEA 158 (248)
Q Consensus 79 ~~~lvivG~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~y~~ad~~~v~~s~~e~~gg~~~lEA 158 (248)
..+++||=+.+....-+...++..|........| .+-+..+-..-|++++--.. ++..|..+++.
T Consensus 7 g~rILvVDD~~~~~~~l~~~L~~~G~~v~~a~~g--------------~eal~~l~~~~dlillD~~m-P~~dG~el~~~ 71 (134)
T d1dcfa_ 7 GLKVLVMDENGVSRMVTKGLLVHLGCEVTTVSSN--------------EECLRVVSHEHKVVFMDVCM-PGVENYQIALR 71 (134)
T ss_dssp TCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSH--------------HHHHHHCCTTCSEEEEECCS-STTTTTHHHHH
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHCCCEEEEECCH--------------HHHHHHhhcCCCeEEEEecc-CCCchHHHHHH
Confidence 4566666554433244555566666542211111 11222222345776652222 44456666655
Q ss_pred Hh-------hC-CcEEE-CCCCCChHHHHHHHHhcCC-ceEEEcCCHHHHHHHHHHhhh
Q 043830 159 AA-------AG-CAVLT-GPHIGHYSNMVSAMQRLNP-KSVLQVSGKSELEEALSQLFS 207 (248)
Q Consensus 159 ~a-------~G-~Pvi~-~~~~~~~~~~~~~~~~~g~-g~~~~~~~~~~l~~~i~~ll~ 207 (248)
+- .. .|||+ |.. ...+......+.|. +++..|-+.++|.+.+.+++.
T Consensus 72 ir~~~~~~~~~~~~ii~lT~~--~~~~~~~~~~~~G~~~~l~KP~~~~~L~~~l~~~l~ 128 (134)
T d1dcfa_ 72 IHEKFTKQRHQRPLLVALSGN--TDKSTKEKCMSFGLDGVLLKPVSLDNIRDVLSDLLE 128 (134)
T ss_dssp HHHHHC-CCSCCCEEEEEESC--CSHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHHS
T ss_pred HHHhcccccCCCCeEEEEeCC--CCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHhh
Confidence 52 11 45664 322 22233333334443 355666799999999988875
No 50
>d1t9ba1 c.31.1.3 (A:290-460) Acetohydroxyacid synthase catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=71.77 E-value=13 Score=25.69 Aligned_cols=65 Identities=5% Similarity=-0.058 Sum_probs=38.1
Q ss_pred EEEecCCC----CCHHHHHHHHHhcCCceEEecccC-CCCCCccEE--EEcCh--hHHHHHHhhCCEEEEcCcc
Q 043830 82 TIIVPRHP----QHGKEIAQKLQKEGEVVALRSRHE-KLMPRTNVY--VVDTL--GELRQLYKLTPIAVIGGSF 146 (248)
Q Consensus 82 lvivG~~~----~~~~~l~~~~~~~~l~~~~~~~~~-~~~~~~~v~--~~~~~--~~l~~~y~~ad~~~v~~s~ 146 (248)
++|+|+|- +-.+++.+++.++|++......+. ..+.+...+ ..+.. .....++..+|++++.++.
T Consensus 14 vii~G~G~~~~~~a~~~l~~lae~~g~Pv~tt~~~~g~~~~~hp~~~G~~g~~~~~~a~~~~~~~Dlvl~~G~~ 87 (171)
T d1t9ba1 14 VLYVGAGILNHADGPRLLKELSDRAQIPVTTTLQGLGSFDQEDPKSLDMLGMHGCATANLAVQNADLIIAVGAR 87 (171)
T ss_dssp EEEECGGGGGSTTHHHHHHHHHHHTTCCEEECGGGTTSSCTTSTTEEEECSTTSCHHHHHHHHHCSEEEEESCC
T ss_pred EEEECcChhhhhhHHHHHHHHHHhcCCceeecccccccccCCcccccccccccccHHHHhhhhcccceeecccc
Confidence 67788652 223578899999999865544332 111111222 23332 2456788999998886553
No 51
>d2r25b1 c.23.1.1 (B:1087-1214) Response regulator Sin1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=71.02 E-value=11 Score=24.70 Aligned_cols=69 Identities=6% Similarity=0.071 Sum_probs=38.5
Q ss_pred CCEEEEcCccCCCCCCCCHHHHH----hhCCcEEECCCCCChHHHHHHHHhcC-CceEEEcCCHHHHHHHHHHhhh
Q 043830 137 TPIAVIGGSFLPGLAGHNISEAA----AAGCAVLTGPHIGHYSNMVSAMQRLN-PKSVLQVSGKSELEEALSQLFS 207 (248)
Q Consensus 137 ad~~~v~~s~~e~~gg~~~lEA~----a~G~Pvi~~~~~~~~~~~~~~~~~~g-~g~~~~~~~~~~l~~~i~~ll~ 207 (248)
-|++++--.. +++.|..+++.+ ....|||+-....+. +......+.| .+++..|-+.++|.+.+.+++.
T Consensus 52 ~dlillD~~m-P~~dG~el~~~ir~~~~~~~piI~lT~~~~~-~~~~~~~~~G~~~~l~KP~~~~~L~~~l~~~~~ 125 (128)
T d2r25b1 52 YNMIFMDVQM-PKVDGLLSTKMIRRDLGYTSPIVALTAFADD-SNIKECLESGMNGFLSKPIKRPKLKTILTEFCA 125 (128)
T ss_dssp CSEEEECSCC-SSSCHHHHHHHHHHHSCCCSCEEEEESCCSH-HHHHHHHHTTCSEEEESSCCHHHHHHHHHHHCT
T ss_pred CCEEEEEeCC-CCCCHHHHHHHHHHccCCCCeEEEEECCCCH-HHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHH
Confidence 4676653222 333455565554 235788752222233 3333333444 3466667799999999988874
No 52
>d1ozha1 c.31.1.3 (A:188-366) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]}
Probab=70.72 E-value=6.2 Score=27.76 Aligned_cols=116 Identities=10% Similarity=0.041 Sum_probs=59.6
Q ss_pred EEEecCCCC---CHHHHHHHHHhcCCceEEecccC-CCCCCccEE---EEcCh--hHHHHHHhhCCEEEEcCc-cCCCCC
Q 043830 82 TIIVPRHPQ---HGKEIAQKLQKEGEVVALRSRHE-KLMPRTNVY---VVDTL--GELRQLYKLTPIAVIGGS-FLPGLA 151 (248)
Q Consensus 82 lvivG~~~~---~~~~l~~~~~~~~l~~~~~~~~~-~~~~~~~v~---~~~~~--~~l~~~y~~ad~~~v~~s-~~e~~g 151 (248)
++|+|++-. -.+++.+++.++|++....+.+. ..+.+.+-+ ..+.. .....++..||++++.++ +.+ +
T Consensus 24 vii~G~g~~~~~a~~~l~~lae~~giPv~tt~~~~g~~~~~~~~~~~G~~g~~~~~~~~~~~~~aDlvl~vG~~~~~-~- 101 (179)
T d1ozha1 24 IFLLGLMASQPENSKALRRLLETSHIPVTSTYQAAGAVNQDNFSRFAGRVGLFNNQAGDRLLQLADLVICIGYSPVE-Y- 101 (179)
T ss_dssp EEEECGGGGSGGGHHHHHHHHHHHCCCEEECGGGTTTCCTTTCTTEEEECSSBTTCHHHHHHHHCSEEEEESCCGGG-S-
T ss_pred EEEEchhhChhhHHHHHHHHHHhccceEEeecccccccccccccccccccCccccHHHhhhhccccceEEEcccccc-c-
Confidence 677887642 33678899999999866544432 111111112 22221 245678999999877554 322 1
Q ss_pred CCCHHHHHhhCCcEEE-CCCCCChHHHHHHHHhcCCceEEEcCCHHHHHHHHHHhhhC
Q 043830 152 GHNISEAAAAGCAVLT-GPHIGHYSNMVSAMQRLNPKSVLQVSGKSELEEALSQLFSD 208 (248)
Q Consensus 152 g~~~lEA~a~G~Pvi~-~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~l~~~i~~ll~~ 208 (248)
..---..-+..||. ..+...+.. .... -+-.+.|+.....+|.+.+++
T Consensus 102 --~~~~~~~~~~kvI~id~d~~~i~~------~~~~-d~~i~gD~~~~l~~L~~~l~~ 150 (179)
T d1ozha1 102 --EPAMWNSGNATLVHIDVLPAYEER------NYTP-DVELVGDIAGTLNKLAQNIDH 150 (179)
T ss_dssp --CGGGTCCSCSEEEEEESSCCCCBT------TBCC-SEEEESCHHHHHHHHHHTCCS
T ss_pred --cccccccccccEEEEecchhhcCC------ccCC-CeEEEeCHHHHHHHHHHhhhc
Confidence 11000122456663 222211100 0011 123447888888888877754
No 53
>d1zesa1 c.23.1.1 (A:3-123) PhoB receiver domain {Escherichia coli [TaxId: 562]}
Probab=70.40 E-value=11 Score=24.35 Aligned_cols=68 Identities=12% Similarity=0.182 Sum_probs=38.9
Q ss_pred CCEEEEcCccCCCCCCCCHHHHH-----hhCCcEEE-CCCCCChHHHHHHHHhcCCceEEEcCCHHHHHHHHHHhh
Q 043830 137 TPIAVIGGSFLPGLAGHNISEAA-----AAGCAVLT-GPHIGHYSNMVSAMQRLNPKSVLQVSGKSELEEALSQLF 206 (248)
Q Consensus 137 ad~~~v~~s~~e~~gg~~~lEA~-----a~G~Pvi~-~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~l~~~i~~ll 206 (248)
-|++++--.. ++..|..+++.+ ...+|||+ |.. ++.....+.+..+-.+++..|-+.++|...+..++
T Consensus 45 ~dlil~D~~m-p~~~G~~l~~~lr~~~~~~~~pvi~lt~~-~~~~~~~~~~~~G~~d~l~KP~~~~~L~~~v~~~l 118 (121)
T d1zesa1 45 PDLILLDWML-PGGSGIQFIKHLKRESMTRDIPVVMLTAR-GEEEDRVRGLETGADDYITKPFSPKELVARIKAVM 118 (121)
T ss_dssp CSEEEECSSC-TTSCHHHHHHHHHHSTTTTTSCEEEEESC-CSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHH
T ss_pred CCEEEeecCC-CCCCHHHHHHHHHhCccCCCCeEEEEECC-CCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHH
Confidence 4565552222 334466666654 34689986 332 24433444333333346666789999999998776
No 54
>d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=69.60 E-value=4.3 Score=26.61 Aligned_cols=21 Identities=14% Similarity=0.120 Sum_probs=16.9
Q ss_pred ceEEEcCCHHHHHHHHHHhhh
Q 043830 187 KSVLQVSGKSELEEALSQLFS 207 (248)
Q Consensus 187 g~~~~~~~~~~l~~~i~~ll~ 207 (248)
+++..|-+.++|...|..++.
T Consensus 98 dyl~KP~~~~~L~~~i~~~l~ 118 (121)
T d1ys7a2 98 DYLVKPFVLAELVARVKALLR 118 (121)
T ss_dssp EEEESSCCHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHHH
Confidence 366777899999999988773
No 55
>d1xhfa1 c.23.1.1 (A:2-122) Aerobic respiration control protein ArcA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=68.42 E-value=12 Score=24.14 Aligned_cols=47 Identities=13% Similarity=0.036 Sum_probs=29.3
Q ss_pred hCCcEEECCCCCChHHHHHHHHhcCCceEEEcCCHHHHHHHHHHhhh
Q 043830 161 AGCAVLTGPHIGHYSNMVSAMQRLNPKSVLQVSGKSELEEALSQLFS 207 (248)
Q Consensus 161 ~G~Pvi~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~l~~~i~~ll~ 207 (248)
..+|||+-...++.......+..+..+++..|-++++|...+..+++
T Consensus 72 ~~~pii~lt~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~v~~~l~ 118 (121)
T d1xhfa1 72 ANVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLS 118 (121)
T ss_dssp CCCEEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHh
Confidence 47898862222233333444433333566777899999999988873
No 56
>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}
Probab=67.13 E-value=16 Score=25.00 Aligned_cols=91 Identities=12% Similarity=0.118 Sum_probs=48.5
Q ss_pred CCeEEEEeCCCcchH-HHHHHHHHHHHHhCCCeEEEEecCCCCCHHHHHHHHHhcCCceEEecccCCCCCCccEEEEcCh
Q 043830 49 HRQVWMASSIHRGEE-KVMLAVHKVLMQKNPNLVTIIVPRHPQHGKEIAQKLQKEGEVVALRSRHEKLMPRTNVYVVDTL 127 (248)
Q Consensus 49 ~~~v~l~~~~~~~~~-~~ll~a~~~l~~~~~~~~lvivG~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~ 127 (248)
+..++++|. ++. ..+++.+ ...... .+.|+.+.. +..++++++++... .++
T Consensus 24 ~~~ilviGa---G~~g~~v~~~L---~~~g~~-~i~v~nRt~---~ka~~l~~~~~~~~------------------~~~ 75 (159)
T d1gpja2 24 DKTVLVVGA---GEMGKTVAKSL---VDRGVR-AVLVANRTY---ERAVELARDLGGEA------------------VRF 75 (159)
T ss_dssp TCEEEEESC---CHHHHHHHHHH---HHHCCS-EEEEECSSH---HHHHHHHHHHTCEE------------------CCG
T ss_pred cCeEEEECC---CHHHHHHHHHH---HhcCCc-EEEEEcCcH---HHHHHHHHhhhccc------------------ccc
Confidence 566666653 332 2344443 333322 577888754 34556666665431 124
Q ss_pred hHHHHHHhhCCEEEEcCccCCCCCCCCHHH-HHh---hCCcEEE
Q 043830 128 GELRQLYKLTPIAVIGGSFLPGLAGHNISE-AAA---AGCAVLT 167 (248)
Q Consensus 128 ~~l~~~y~~ad~~~v~~s~~e~~gg~~~lE-A~a---~G~Pvi~ 167 (248)
+++...+..+|++|...|-.+..-+...++ ++. .++|+++
T Consensus 76 ~~~~~~l~~~Divi~atss~~~ii~~~~i~~~~~~r~~~~~~~i 119 (159)
T d1gpja2 76 DELVDHLARSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILI 119 (159)
T ss_dssp GGHHHHHHTCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEE
T ss_pred hhHHHHhccCCEEEEecCCCCccccHhhhHHHHHhcccCCCeEE
Confidence 688999999999776544322111111233 333 3678665
No 57
>d1vi6a_ c.23.15.1 (A:) Ribosomal protein S2 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=66.86 E-value=1.5 Score=31.96 Aligned_cols=90 Identities=14% Similarity=0.177 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEecCCCCCHHHHHHHHHhcCCceEE-ecccCCCCCCccEEEEcChhHHHHHHhhCCEEE
Q 043830 63 EKVMLAVHKVLMQKNPNLVTIIVPRHPQHGKEIAQKLQKEGEVVAL-RSRHEKLMPRTNVYVVDTLGELRQLYKLTPIAV 141 (248)
Q Consensus 63 ~~~ll~a~~~l~~~~~~~~lvivG~~~~~~~~l~~~~~~~~l~~~~-~~~~~~~~~~~~v~~~~~~~~l~~~y~~ad~~~ 141 (248)
.+.|.+|+.-+.. ...-++++||.-+.....++..+...|..... ++.+.. +++ .....+..-|++|
T Consensus 48 ~~~L~~A~~~l~~-~~~~~ILfVgtk~~~~~~v~~~A~~~g~~~v~~RWlgG~--------LTN---~~~~~~~~P~~li 115 (193)
T d1vi6a_ 48 DERIRVAAKFLSR-YEPSKILLVAARQYAHKPVQMFSKVVGSDYIVGRFIPGT--------LTN---PMLSEYREPEVVF 115 (193)
T ss_dssp HHHHHHHHHHHTT-SCGGGEEEEECSGGGHHHHHHHHHHHCCEEEESSCCTTT--------TTC---TTSTTCCCCSEEE
T ss_pred HHHHHHHHHHHHH-hccCceEEeecccchHHHHHHHHHhcCCCcccccccCCc--------ccc---hHHhhcccceEEE
Confidence 3456666665543 33346788887666556788888888776432 222110 111 2233466778888
Q ss_pred EcCccCCCCCCCCHHHHHhhCCcEEE
Q 043830 142 IGGSFLPGLAGHNISEAAAAGCAVLT 167 (248)
Q Consensus 142 v~~s~~e~~gg~~~lEA~a~G~Pvi~ 167 (248)
+.....+ -..+.||..+|+|||+
T Consensus 116 v~dp~~d---~~ai~Ea~~l~IPvI~ 138 (193)
T d1vi6a_ 116 VNDPAID---KQAVSEATAVGIPVVA 138 (193)
T ss_dssp ESCTTTT---HHHHHHHHHTTCCEEE
T ss_pred EEcCcch---HHHHHHHHHcCCCeee
Confidence 8544433 2458999999999997
No 58
>d2q4oa1 c.129.1.1 (A:8-190) Hypothetical protein At2g37210/T2N18.3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=66.23 E-value=19 Score=25.39 Aligned_cols=81 Identities=14% Similarity=0.088 Sum_probs=45.7
Q ss_pred cEEEEcCh-hHHHHHHhhCCEEEEcCccCCCCCCC-CHHHHHh------hCCcEEECCCCCChHHHH---HHHHhcCC--
Q 043830 120 NVYVVDTL-GELRQLYKLTPIAVIGGSFLPGLAGH-NISEAAA------AGCAVLTGPHIGHYSNMV---SAMQRLNP-- 186 (248)
Q Consensus 120 ~v~~~~~~-~~l~~~y~~ad~~~v~~s~~e~~gg~-~~lEA~a------~G~Pvi~~~~~~~~~~~~---~~~~~~g~-- 186 (248)
.++.++++ .....++..||.+++.|. |+|.+ -++|++. ..+|+++-+..+-+.... +.+.+.|.
T Consensus 85 ~~~~~~~~~~Rk~~m~~~sdafIvlPG---G~GTLdEl~e~lt~~ql~~~~kpiiiln~~gfw~~l~~~l~~~~~~g~i~ 161 (183)
T d2q4oa1 85 EVRAVADMHQRKAEMAKHSDAFIALPG---GYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFIS 161 (183)
T ss_dssp EEEEESSHHHHHHHHHHTCSEEEECSC---CHHHHHHHHHHHHHHHHTSCCCCEEEECGGGTTHHHHHHHHHHHHTTSSC
T ss_pred eeeecccHHHHHHHHHHhCceEEEeCC---cchhHHHHHHHHHHHHhcCCCCCeEEeecCccHHHHHHHHHHHHHCCCCC
Confidence 34455554 456778899999887642 22111 1578874 468888743322344333 33333321
Q ss_pred ----ceEEEcCCHHHHHHHHH
Q 043830 187 ----KSVLQVSGKSELEEALS 203 (248)
Q Consensus 187 ----g~~~~~~~~~~l~~~i~ 203 (248)
.....++|++++.+.|.
T Consensus 162 ~~~~~~~~~~d~~~e~~~~l~ 182 (183)
T d2q4oa1 162 PTAREIIVSAPTAKELVKKLE 182 (183)
T ss_dssp HHHHTTEEEESSHHHHHHHHH
T ss_pred hHHcCcEEEcCCHHHHHHHHh
Confidence 02556789998887764
No 59
>d2ji7a1 c.31.1.3 (A:195-369) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]}
Probab=64.91 E-value=5.2 Score=28.06 Aligned_cols=115 Identities=14% Similarity=0.104 Sum_probs=55.6
Q ss_pred EEEecCCC---CCHHHHHHHHHhcCCceEEecccCCCCCCccEEEEcChhHHHHHHhhCCEEEEcCccCCCC--CCCCHH
Q 043830 82 TIIVPRHP---QHGKEIAQKLQKEGEVVALRSRHEKLMPRTNVYVVDTLGELRQLYKLTPIAVIGGSFLPGL--AGHNIS 156 (248)
Q Consensus 82 lvivG~~~---~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~y~~ad~~~v~~s~~e~~--gg~~~l 156 (248)
++|+|+|- +-.+++.+++.++|++....+.+....+.++-+..+.. -...+..||++++-++....+ +|..
T Consensus 23 vii~G~g~~~~~a~~~l~~lae~~~iPv~~t~~~~g~~~~~h~~~~~~~--~~~~l~~aDlii~vG~~~~~~~~~~~~-- 98 (175)
T d2ji7a1 23 VIMLGKGAAYAQCDDEIRALVEETGIPFLPMGMAKGLLPDNHPQSAAAT--RAFALAQCDVCVLIGARLNWLMQHGKG-- 98 (175)
T ss_dssp EEEECHHHHHTTCHHHHHHHHHHHTCCEEECTTTBTTBCTTCTTBCGGG--HHHHHHHCSEEEEESCCSSGGGGGGCS--
T ss_pred EEEECCCccccccHHHHHHHhhhceeeeeccccccccCCCccccccccc--ccceeecccceeeeeccCCcccccccc--
Confidence 67778642 33478888888888886543333211111121122222 234588999988765432100 0111
Q ss_pred HHHh-hCCcEE-ECCCCCChHHHHHHHHhcCCceEEEcCCHHHHHHHHHHhhh
Q 043830 157 EAAA-AGCAVL-TGPHIGHYSNMVSAMQRLNPKSVLQVSGKSELEEALSQLFS 207 (248)
Q Consensus 157 EA~a-~G~Pvi-~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~l~~~i~~ll~ 207 (248)
.-.. -++++| +..+.. ++ .......+-...|+.....+|.+.+.
T Consensus 99 ~~~~~~~~kvI~Id~d~~---~i----~~~~~~~l~i~~D~~~~l~~L~~~l~ 144 (175)
T d2ji7a1 99 KTWGDELKKYVQIDIQAN---EM----DSNQPIAAPVVGDIKSAVSLLRKALK 144 (175)
T ss_dssp GGGTTSCCEEEEEESCGG---GT----TSSSCCSEEEESCHHHHHHHHHHHTT
T ss_pred cccCCccceEEEEeccch---hh----ccccCcCceEEEcHHHHHHHHHHHhc
Confidence 1111 245677 332221 11 11111122345788888888877764
No 60
>d1q6za1 c.31.1.3 (A:182-341) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]}
Probab=64.11 E-value=11 Score=25.53 Aligned_cols=134 Identities=10% Similarity=0.142 Sum_probs=66.2
Q ss_pred chHHHHHHHHHHHHHhCCCeEEEEecCC---CCCHHHHHHHHHhcCCceEEec-c-cCCCCCCccEEE--Ec-ChhHHHH
Q 043830 61 GEEKVMLAVHKVLMQKNPNLVTIIVPRH---PQHGKEIAQKLQKEGEVVALRS-R-HEKLMPRTNVYV--VD-TLGELRQ 132 (248)
Q Consensus 61 ~~~~~ll~a~~~l~~~~~~~~lvivG~~---~~~~~~l~~~~~~~~l~~~~~~-~-~~~~~~~~~v~~--~~-~~~~l~~ 132 (248)
++++.+++.+..- +.| ++|+|.+ ....+++.+++.++|.+..... . +...+.....+. .+ .......
T Consensus 7 ~~ld~~~~~l~~A--~rP---vii~G~g~~~~~~~~~l~~lae~l~~pv~~t~~~~~~~~~~~~p~~~G~~~~~~~~~~~ 81 (160)
T d1q6za1 7 QDLDILVKALNSA--SNP---AIVLGPDVDAANANADCVMLAERLKAPVWVAPSAPRCPFPTRHPCFRGLMPAGIAAISQ 81 (160)
T ss_dssp HHHHHHHHHHHHC--SSC---EEEECHHHHHTTCHHHHHHHHHHHTCCEEECSSCSBCCSCTTSTTEEEECCSCHHHHHH
T ss_pred HHHHHHHHHHHhC--CCE---EEEECcCccccccchHHHHHHHhcCceEEeecccccccccccccccccccccCcHHHHH
Confidence 3455555555432 234 6778865 2344889999999998754332 2 111111112221 12 1235678
Q ss_pred HHhhCCEEEEcCc-cCCCCCCCCHHHHHhhCCcEEECCCCCChHHHHHHHHhcCCceEEEcCCHHHHHHHHHHhhh
Q 043830 133 LYKLTPIAVIGGS-FLPGLAGHNISEAAAAGCAVLTGPHIGHYSNMVSAMQRLNPKSVLQVSGKSELEEALSQLFS 207 (248)
Q Consensus 133 ~y~~ad~~~v~~s-~~e~~gg~~~lEA~a~G~Pvi~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~l~~~i~~ll~ 207 (248)
++..||++++.++ +.+ +......-...-+..+|.-+. +-.+. .....+.. ...|.....+.+...+.
T Consensus 82 ~l~~aDlil~lG~~l~~-~~~~~~~~~~~~~~~ii~v~~--d~~~~----~~~~~~~~-i~~D~~~~l~~L~~~l~ 149 (160)
T d1q6za1 82 LLEGHDVVLVIGAPVFR-YHQYDPGQYLKPGTRLISVTC--DPLEA----ARAPMGDA-IVADIGAMASALANLVE 149 (160)
T ss_dssp HHTTCSEEEEESSCTTC-CCSCCCSCSSCTTCEEEEEES--CHHHH----HHCSSSEE-EESCHHHHHHHHHHHSC
T ss_pred HHhcCCeEEEEeccccc-ccccccccccccCceEEEeeC--CHHHh----CCCCCCee-EEeCHHHHHHHHHHhcc
Confidence 8999999887654 222 100000011122444654221 21122 12222233 34788888888877765
No 61
>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}
Probab=61.44 E-value=17 Score=23.28 Aligned_cols=47 Identities=13% Similarity=0.220 Sum_probs=27.8
Q ss_pred HhhCCcEEECCCCCChHHHHHHHHhcCCceEEEcCCHHHHHHHHHHh
Q 043830 159 AAAGCAVLTGPHIGHYSNMVSAMQRLNPKSVLQVSGKSELEEALSQL 205 (248)
Q Consensus 159 ~a~G~Pvi~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~l~~~i~~l 205 (248)
..-.+|||+-...++.....+.+..+-.+++..|-++++|.++|.++
T Consensus 71 ~~~~~pvi~ls~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~l~~v 117 (118)
T d1u0sy_ 71 IDPNAKIIVCSAMGQQAMVIEAIKAGAKDFIVKPFQPSRVVEALNKV 117 (118)
T ss_dssp HCTTCCEEEEECTTCHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHH
T ss_pred hCCCCcEEEEEccCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHh
Confidence 34568888632222443344444333335667778999999988764
No 62
>d1zgza1 c.23.1.1 (A:2-121) TorCAD operon transcriptional regulator TorD, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=60.84 E-value=17 Score=23.19 Aligned_cols=110 Identities=15% Similarity=0.176 Sum_probs=54.0
Q ss_pred EEEEecCCCCCHHHHHHHHHhcCCceEEecccCCCCCCccEEEEcChhHHHHHHh--hCCEEEEcCccCCCCCCCCHHHH
Q 043830 81 VTIIVPRHPQHGKEIAQKLQKEGEVVALRSRHEKLMPRTNVYVVDTLGELRQLYK--LTPIAVIGGSFLPGLAGHNISEA 158 (248)
Q Consensus 81 ~lvivG~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~y~--~ad~~~v~~s~~e~~gg~~~lEA 158 (248)
+++||-+.+.....+...+++.|... .....-.+...++. .-|++++--.. ++..|..+++.
T Consensus 3 rILiVDDd~~~~~~l~~~L~~~g~~v---------------~~a~~~~~a~~~~~~~~~dliilD~~m-p~~~g~~~~~~ 66 (120)
T d1zgza1 3 HIVIVEDEPVTQARLQSYFTQEGYTV---------------SVTASGAGLREIMQNQSVDLILLDINL-PDENGLMLTRA 66 (120)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTTCEE---------------EEESSHHHHHHHHHHSCCSEEEEESCC-SSSCHHHHHHH
T ss_pred EEEEEeCCHHHHHHHHHHHHHCCCEE---------------EEECCHHHHHHHHHhcCCCEEeeehhh-ccchhHHHHHH
Confidence 56666665554455566666655532 12222222222222 24665542222 22233334433
Q ss_pred H--hhCCcEEECCCCCChHHHHHHHHhcCCceEEEcCCHHHHHHHHHHhh
Q 043830 159 A--AAGCAVLTGPHIGHYSNMVSAMQRLNPKSVLQVSGKSELEEALSQLF 206 (248)
Q Consensus 159 ~--a~G~Pvi~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~l~~~i~~ll 206 (248)
. ....|||.-....+.......+..+..+++..|-+.++|...|..++
T Consensus 67 ~~~~~~~piI~lt~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~l 116 (120)
T d1zgza1 67 LRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLL 116 (120)
T ss_dssp HHTTCCCEEEEEESSCCHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHH
T ss_pred HhccCCCeEEEEEccCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHH
Confidence 2 34567775222223333444343222346667789999999998877
No 63
>d2djia1 c.31.1.3 (A:187-363) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]}
Probab=59.55 E-value=14 Score=25.64 Aligned_cols=116 Identities=8% Similarity=0.018 Sum_probs=59.1
Q ss_pred EEEecCCCC-CHHHHHHHHHhcCCceEEecccCCCCCCccEEEEcC---h--hHHHHHHhhCCEEEEcCccCCCCCCCCH
Q 043830 82 TIIVPRHPQ-HGKEIAQKLQKEGEVVALRSRHEKLMPRTNVYVVDT---L--GELRQLYKLTPIAVIGGSFLPGLAGHNI 155 (248)
Q Consensus 82 lvivG~~~~-~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~---~--~~l~~~y~~ad~~~v~~s~~e~~gg~~~ 155 (248)
++|+|+|-. ..+++.++++++|++....+.+...-+.++=++.|. . ..-..++..||++++.++.... ...
T Consensus 25 vii~G~g~~~a~~~l~~lae~l~~Pv~~t~~~~g~ip~~hp~~~G~~g~~~~~~~~~~l~~aDlvi~lG~~~~~---~~~ 101 (177)
T d2djia1 25 VIYAGIGTMGHGPAVQELARKIKAPVITTGKNFETFEWDFEALTGSTYRVGWKPANETILEADTVLFAGSNFPF---SEV 101 (177)
T ss_dssp EEEECGGGTTCHHHHHHHHHHHTCCEEECTTCGGGSCTTCTTBCCCSSSSSCHHHHHHHHHCSEEEEESCCCTT---TTT
T ss_pred EEEECcChhhHHHHHHHhhhccceEEEecccccccccccccccccccccccChhhhhhhhccCceEEeeccCCC---ccc
Confidence 567776532 235688888888887544333221111122122221 1 2456789999998886664321 111
Q ss_pred HHHHhhCCcEEE-CCCCCChHHHHHHHHhcCCceEEEcCCHHHHHHHHHHhhh
Q 043830 156 SEAAAAGCAVLT-GPHIGHYSNMVSAMQRLNPKSVLQVSGKSELEEALSQLFS 207 (248)
Q Consensus 156 lEA~a~G~Pvi~-~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~l~~~i~~ll~ 207 (248)
.-.+.-..++|. ..+.. ++ ......-+-...|+....++|...+.
T Consensus 102 ~~~~~~~~kiI~Id~d~~---~i----~~~~~~d~~i~gD~~~~L~~L~~~l~ 147 (177)
T d2djia1 102 EGTFRNVDNFIQIDIDPA---ML----GKRHHADVAILGDAALAIDEILNKVD 147 (177)
T ss_dssp TTTTTTCSEEEEEESCGG---GT----TSSSCCSEEEESCHHHHHHHHHHHSC
T ss_pred eeccccccchheEEeccc---cc----CCcccCceEEEeCHHHHHHHHHHhhh
Confidence 122444567774 22211 11 11111123345788888888877775
No 64
>d2uubb1 c.23.15.1 (B:7-240) Ribosomal protein S2 {Thermus thermophilus [TaxId: 274]}
Probab=52.72 E-value=30 Score=25.41 Aligned_cols=28 Identities=11% Similarity=-0.011 Sum_probs=20.2
Q ss_pred CCEEEEcCccCCCCCCCCHHHHHhhCCcEEE
Q 043830 137 TPIAVIGGSFLPGLAGHNISEAAAAGCAVLT 167 (248)
Q Consensus 137 ad~~~v~~s~~e~~gg~~~lEA~a~G~Pvi~ 167 (248)
=|++|+.....+ -..+-||-.+|+|||+
T Consensus 153 Pd~viv~d~~~~---~~Ai~Ea~~l~IPvIa 180 (234)
T d2uubb1 153 PDAIFVVDPTKE---AIAVREARKLFIPVIA 180 (234)
T ss_dssp CSEEEESCTTTT---HHHHHHHHHHTCCEEE
T ss_pred ceeEEEecCCcc---HHHHHHHHhhCCCEEE
Confidence 578777433322 2458999999999997
No 65
>d2nu7a2 c.23.4.1 (A:122-287) Succinyl-CoA synthetase, alpha-chain, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=50.79 E-value=11 Score=26.26 Aligned_cols=23 Identities=22% Similarity=0.372 Sum_probs=17.6
Q ss_pred HHhcCCceEEEcCCHHHHHHHHHHhh
Q 043830 181 MQRLNPKSVLQVSGKSELEEALSQLF 206 (248)
Q Consensus 181 ~~~~g~g~~~~~~~~~~l~~~i~~ll 206 (248)
+...| ++.++|.++|.+.+..+|
T Consensus 144 ~r~aG---vi~v~~~~el~~~l~~vl 166 (166)
T d2nu7a2 144 LEAAG---VKTVRSLADIGEALKTVL 166 (166)
T ss_dssp HHTTT---CEECSSGGGHHHHHHHHC
T ss_pred HHHCC---ceEeCCHHHHHHHHHHhC
Confidence 44444 577899999999988765
No 66
>d2nzwa1 c.87.1.11 (A:1-349) Alpha1,3-fucosyltransferase FucT {Helicobacter pylori [TaxId: 210]}
Probab=50.79 E-value=8.1 Score=30.60 Aligned_cols=109 Identities=7% Similarity=0.020 Sum_probs=61.3
Q ss_pred HHHHHHhhCCEEEEc-CccCCCCCCCCHHHHHhhCC-cEEECCCCCChHHHHHHHHhcCCceEEEc---CCHHHHHHHHH
Q 043830 129 ELRQLYKLTPIAVIG-GSFLPGLAGHNISEAAAAGC-AVLTGPHIGHYSNMVSAMQRLNPKSVLQV---SGKSELEEALS 203 (248)
Q Consensus 129 ~l~~~y~~ad~~~v~-~s~~e~~gg~~~lEA~a~G~-Pvi~~~~~~~~~~~~~~~~~~g~g~~~~~---~~~~~l~~~i~ 203 (248)
+-.++++.-...++. -|..+|...-.+.+|+.+|+ ||..|.. +.. +.+-. + ..+.. ++.++|++.|.
T Consensus 224 ~K~~~l~~ykF~l~~EN~~~~~YvTEKi~da~~~g~iPIy~G~~--~i~---~~f~~-~--sfI~~~df~s~~el~~~i~ 295 (349)
T d2nzwa1 224 NKNEFLSQYKFNLCFENTQGYGYVTEKIIDAYFSHTIPIYWGSP--SVA---KDFNP-K--SFVNVHDFKNFDEAIDYIK 295 (349)
T ss_dssp CHHHHHTTEEEEEEECSSCCTTCCCTHHHHHHHTTCEEEEESCT--TGG---GTSCG-G--GSEEGGGSSSHHHHHHHHH
T ss_pred hHHHHHhCCCeEEEECCcCCCCCcchHHHHHHhCCeEEEEECCC--cHH---HcCCC-c--cEEEhhhCCCHHHHHHHHH
Confidence 445556655554443 23445432334899999995 9998752 221 12222 2 23433 68999999999
Q ss_pred HhhhCHHHHHHHHHHHHH-HHHH---h-chhHHHHHHHHHHHHhhhh
Q 043830 204 QLFSDARVLEAQQMAAKQ-AFCA---L-SSGIVANVWNLLNFHVFRR 245 (248)
Q Consensus 204 ~ll~~~~~~~~~~~~~~~-~~~~---~-~~~~~~~~l~~~~~~~~~~ 245 (248)
.|-+|++...+|-..-.. .... . ..-..+++.+.++.+++.+
T Consensus 296 ~l~~n~~~Y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~f~~~ile~~ 342 (349)
T d2nzwa1 296 YLHTHKNAYLDMLYENPLNTLDGKAYFYQNLSFKKILAFFKTILEND 342 (349)
T ss_dssp HHHTCHHHHHHHHHSCSSCEETTEECCGGGCCHHHHHHHHHHHHHCC
T ss_pred HHhcCHHHHHHHHhccccccchhhhhhhhhhhHHHHHHHHHHHhhcc
Confidence 999999887665431000 0000 0 1122456667777666543
No 67
>d1ybha1 c.31.1.3 (A:281-459) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]}
Probab=50.74 E-value=31 Score=23.77 Aligned_cols=118 Identities=9% Similarity=-0.018 Sum_probs=60.7
Q ss_pred EEEecCCCC-CHHHHHHHHHhcCCceEEecccC--CCCCC-ccEEEEcChh--HHHHHHhhCCEEEEcCccCCCCCCCCH
Q 043830 82 TIIVPRHPQ-HGKEIAQKLQKEGEVVALRSRHE--KLMPR-TNVYVVDTLG--ELRQLYKLTPIAVIGGSFLPGLAGHNI 155 (248)
Q Consensus 82 lvivG~~~~-~~~~l~~~~~~~~l~~~~~~~~~--~~~~~-~~v~~~~~~~--~l~~~y~~ad~~~v~~s~~e~~gg~~~ 155 (248)
++|+|.|-. -.+++.+++.++|++......+. .+... ..+-..+..+ ....++..||++++.++..... ...-
T Consensus 23 vii~G~G~~~a~~~l~~lae~~~~Pv~tt~~~~g~~~~~h~~~~G~~G~~g~~~~~~~~~~aDlil~lG~~l~~~-~~~~ 101 (179)
T d1ybha1 23 VLYVGGGCLNSSDELGRFVELTGIPVASTLMGLGSYPCDDELSLHMLGMHGTVYANYAVEHSDLLLAFGVRFDDR-VTGK 101 (179)
T ss_dssp EEEECGGGTTCHHHHHHHHHHHCCCEEECTTTTTSSCTTSTTEEEECSTTSCHHHHHHHHHCSEEEEESCCCCHH-HHSS
T ss_pred EEEECHHHHHHHHHHHHHHhhhcccceecccccCCCccccccccccCCCcCCHHHHHHHHhhhhhhhcccccccc-cccc
Confidence 677786532 23678888888888865544332 11111 1122333332 3457888999988766532210 0001
Q ss_pred HHHHhhCCcEEECC-CCCChHHHHHHHHhcCCceEEEcCCHHHHHHHHHHhhh
Q 043830 156 SEAAAAGCAVLTGP-HIGHYSNMVSAMQRLNPKSVLQVSGKSELEEALSQLFS 207 (248)
Q Consensus 156 lEA~a~G~Pvi~~~-~~~~~~~~~~~~~~~g~g~~~~~~~~~~l~~~i~~ll~ 207 (248)
.....-+..+|.-+ +...+ ...-..-+-...|+....++|.+.+.
T Consensus 102 ~~~~~~~~kiI~Id~d~~~~-------~~~~~~~~~i~~D~~~~l~~L~~~l~ 147 (179)
T d1ybha1 102 LEAFASRAKIVHIDIDSAEI-------GKNKTPHVSVCGDVKLALQGMNKVLE 147 (179)
T ss_dssp GGGTTTTSEEEEEESCTTTT-------TSSSCCSEEEESCHHHHHHHHHHHHH
T ss_pred ccccCCCCeEEEEeCccccc-------ccccCCCceEEeccHHHHHHHHHHHH
Confidence 23445667777422 22111 01111123345788888777766664
No 68
>d2at2a2 c.78.1.1 (A:145-295) Aspartate carbamoyltransferase catalytic subunit {Bacillus subtilis [TaxId: 1423]}
Probab=49.14 E-value=13 Score=25.25 Aligned_cols=14 Identities=0% Similarity=0.230 Sum_probs=10.5
Q ss_pred HHHHHHhhCCEEEE
Q 043830 129 ELRQLYKLTPIAVI 142 (248)
Q Consensus 129 ~l~~~y~~ad~~~v 142 (248)
++.+....||++++
T Consensus 52 ~~~ea~~~aDviy~ 65 (151)
T d2at2a2 52 SMDEAVESSDVVML 65 (151)
T ss_pred echhccccCceeee
Confidence 56677888998665
No 69
>d1o0sa1 c.2.1.7 (A:296-603) Mitochondrial NAD(P)-dependent malic enzyme {Pig roundworm (Ascaris suum) [TaxId: 6253]}
Probab=49.12 E-value=3.7 Score=32.08 Aligned_cols=37 Identities=16% Similarity=0.256 Sum_probs=22.6
Q ss_pred HHHHHhhC--CEEEEcCccCCCCCCCCHHHHHh--hCCcEEE
Q 043830 130 LRQLYKLT--PIAVIGGSFLPGLAGHNISEAAA--AGCAVLT 167 (248)
Q Consensus 130 l~~~y~~a--d~~~v~~s~~e~~gg~~~lEA~a--~G~Pvi~ 167 (248)
+.+....+ ++ +++.|-..|.....++++|+ +..|||.
T Consensus 95 l~~~i~~~kptv-liG~s~~~g~ft~evv~~Ma~~~~~PIIF 135 (308)
T d1o0sa1 95 ILEVIRAARPGA-LIGASTVRGAFNEEVIRAMAEINERPIIF 135 (308)
T ss_dssp HHHHHHHHCCSE-EEECSSCTTCSCHHHHHHHHHHCSSCEEE
T ss_pred HHHHHhcccccc-EEecccccCCCCHHHHHHHHhhCCCcEEE
Confidence 34444433 45 45666544433445799987 7889997
No 70
>d1vb5a_ c.124.1.5 (A:) Putative eIF-2B subunit 2-like protein PH0440 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=48.84 E-value=49 Score=24.76 Aligned_cols=85 Identities=13% Similarity=0.252 Sum_probs=50.9
Q ss_pred HHHHHHHHHHhCCCeEEEEecCCCCC-HHHHHHHHHhcCCceEEecccCCCCCCccEEEEcChhHHHHHHhhCCEEEEcC
Q 043830 66 MLAVHKVLMQKNPNLVTIIVPRHPQH-GKEIAQKLQKEGEVVALRSRHEKLMPRTNVYVVDTLGELRQLYKLTPIAVIGG 144 (248)
Q Consensus 66 ll~a~~~l~~~~~~~~lvivG~~~~~-~~~l~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~y~~ad~~~v~~ 144 (248)
++..+....++..++++++.-..|.. ...+...+.+.|++.. ++.| +.+..+|+.+|++++|.
T Consensus 121 v~~~l~~a~~~gk~~~V~v~EsrP~~eG~~la~~L~~~GI~vt--------------lI~D--sa~~~~m~~~d~VivGA 184 (274)
T d1vb5a_ 121 VLEIIRTAKERKKRFKVILTESSPDYEGLHLARELEFSGIEFE--------------VITD--AQMGLFCREASIAIVGA 184 (274)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCTTTTHHHHHHHHHHHTTCCEE--------------EECG--GGHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHHcCCCeEEEEeCCCcccchHHHHHHHHHcCCceE--------------Eecc--hHHHHHhhcCCEEEEee
Confidence 33344444556677887766555553 2445555667777532 3444 46788899999998876
Q ss_pred c-cCCCCCCC-----CH---HHHHhhCCcEEE
Q 043830 145 S-FLPGLAGH-----NI---SEAAAAGCAVLT 167 (248)
Q Consensus 145 s-~~e~~gg~-----~~---lEA~a~G~Pvi~ 167 (248)
. .... |+. +. +=|-.+|+|+++
T Consensus 185 d~v~~n-G~v~nkiGT~~~A~~Ak~~~vP~~V 215 (274)
T d1vb5a_ 185 DMITKD-GYVVNKAGTYLLALACHENAIPFYV 215 (274)
T ss_dssp SEECTT-SCEEEETTHHHHHHHHHHTTCCEEE
T ss_pred eEEecC-CCEEeccchhHHHHHHHHcCCCceE
Confidence 4 3332 221 22 444557999987
No 71
>d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]}
Probab=48.04 E-value=22 Score=27.96 Aligned_cols=109 Identities=17% Similarity=0.077 Sum_probs=51.3
Q ss_pred eEEEEeCCCcchHHHHHHHHHHHHHhCCCeE--EEEecCCCCCHHHHHHHHHhcCCceEEecccCCCCCCccEEEEc-Ch
Q 043830 51 QVWMASSIHRGEEKVMLAVHKVLMQKNPNLV--TIIVPRHPQHGKEIAQKLQKEGEVVALRSRHEKLMPRTNVYVVD-TL 127 (248)
Q Consensus 51 ~v~l~~~~~~~~~~~ll~a~~~l~~~~~~~~--lvivG~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~-~~ 127 (248)
.++++.|+++. +..+...+..++ +.+++. +++-|.| . +...+.....|+.............. ....++ -+
T Consensus 4 kI~~v~GtR~e-~~kl~pli~~l~-~~~~~~~~li~tG~H--~-~~~~~~~~~~~i~~d~~l~~~~~~~s-~~~~~~~~~ 77 (373)
T d1v4va_ 4 RVVLAFGTRPE-ATKMAPVYLALR-GIPGLKPLVLLTGQH--R-EQLRQALSLFGIQEDRNLDVMQERQA-LPDLAARIL 77 (373)
T ss_dssp EEEEEECSHHH-HHHHHHHHHHHH-TSTTEEEEEEECSSC--H-HHHHHHHHTTTCCCSEECCCCSSCCC-HHHHHHHHH
T ss_pred eEEEEEEhhHH-HHHHHHHHHHHH-hCCCCCEEEEEccCC--h-hhhhCcchhcCCCccccCCCCCCCCC-HHHHHHHHH
Confidence 46666666542 333444444443 346554 4444655 2 44555566667653222111100000 000000 01
Q ss_pred hHHHHHHhh--CCEEEEcCccCCCCCCCCHHHHHhhCCcEEE
Q 043830 128 GELRQLYKL--TPIAVIGGSFLPGLAGHNISEAAAAGCAVLT 167 (248)
Q Consensus 128 ~~l~~~y~~--ad~~~v~~s~~e~~gg~~~lEA~a~G~Pvi~ 167 (248)
..+..++.. -|+++|.+...+.+ -..+=|..+++|++-
T Consensus 78 ~~~~~~l~~~kPD~vlv~GDr~e~l--a~a~aa~~~~ipi~H 117 (373)
T d1v4va_ 78 PQAARALKEMGADYVLVHGDTLTTF--AVAWAAFLEGIPVGH 117 (373)
T ss_dssp HHHHHHHHHTTCSEEEEESSCHHHH--HHHHHHHHTTCCEEE
T ss_pred HHHhhhhhhcCcccccccccCccch--hHHHHHHHhhhhhee
Confidence 234444432 48888877655532 123566778999995
No 72
>d1wbha1 c.1.10.1 (A:1-213) KDPG aldolase {Escherichia coli [TaxId: 562]}
Probab=47.37 E-value=11 Score=27.57 Aligned_cols=39 Identities=13% Similarity=-0.101 Sum_probs=18.1
Q ss_pred hhHHHHHHhh-CCEEEEcCccCCCCCCCCHHHHHh---hCCcEEE
Q 043830 127 LGELRQLYKL-TPIAVIGGSFLPGLAGHNISEAAA---AGCAVLT 167 (248)
Q Consensus 127 ~~~l~~~y~~-ad~~~v~~s~~e~~gg~~~lEA~a---~G~Pvi~ 167 (248)
..|+...+.. ++++=++|... +||...+-++. -+.+++.
T Consensus 118 psEi~~A~~~G~~~vKlFPA~~--~Gg~~~lkal~~p~p~~~~~p 160 (213)
T d1wbha1 118 VSELMLGMDYGLKEFKFFPAEA--NGGVKALQAIAGPFSQVRFCP 160 (213)
T ss_dssp HHHHHHHHHTTCCEEEETTTTT--TTHHHHHHHHHTTCTTCEEEE
T ss_pred HHHHHHHHHCCCCEEEeccchh--cChHHHHHHhcCcccCCceee
Confidence 3455544444 56655555422 23444444332 3455554
No 73
>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}
Probab=47.04 E-value=36 Score=22.79 Aligned_cols=73 Identities=14% Similarity=0.019 Sum_probs=37.7
Q ss_pred HHHHhhCCEEEEcCccCCCCCCCCHHHHHhhCCcEEE----CCCCCChHHHHHHHHhcCCceEEEcC----CHHHHHHHH
Q 043830 131 RQLYKLTPIAVIGGSFLPGLAGHNISEAAAAGCAVLT----GPHIGHYSNMVSAMQRLNPKSVLQVS----GKSELEEAL 202 (248)
Q Consensus 131 ~~~y~~ad~~~v~~s~~e~~gg~~~lEA~a~G~Pvi~----~~~~~~~~~~~~~~~~~g~g~~~~~~----~~~~l~~~i 202 (248)
..+....|++++.+... .-...+..++..|++|++ +.......++.+...+.+ ..+.+. -...+++.+
T Consensus 56 ~~l~~~~D~V~I~tp~~--~h~~~~~~al~~gk~V~~EKPla~~~~e~~~l~~~a~~~~--~~~~v~~~~r~~~~~~~~~ 131 (164)
T d1tlta1 56 SSLAASCDAVFVHSSTA--SHFDVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKK--LTLMVGFNRRFFVGCARHF 131 (164)
T ss_dssp HHHHTTCSEEEECSCTT--HHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTT--CCEEEECGGGGHHHHHHHH
T ss_pred hhhhhhcccccccccch--hccccccccccccceeeccccccCCHHHHHHHHHHHHHcC--CcEEEEeccccCHHHHHHH
Confidence 33356789987743211 111236889999999997 222223334444444444 333331 123345555
Q ss_pred HHhhh
Q 043830 203 SQLFS 207 (248)
Q Consensus 203 ~~ll~ 207 (248)
.+++.
T Consensus 132 ~~~i~ 136 (164)
T d1tlta1 132 IECVQ 136 (164)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55554
No 74
>d1zh2a1 c.23.1.1 (A:2-120) Transcriptional regulatory protein KdpE, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=46.75 E-value=31 Score=21.88 Aligned_cols=46 Identities=15% Similarity=0.134 Sum_probs=27.4
Q ss_pred hCCcEEECCCCCChHHHHHHHHhcCCceEEEcCCHHHHHHHHHHhh
Q 043830 161 AGCAVLTGPHIGHYSNMVSAMQRLNPKSVLQVSGKSELEEALSQLF 206 (248)
Q Consensus 161 ~G~Pvi~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~l~~~i~~ll 206 (248)
...|+|.-....+.......+..+..+++..|-+.++|...|..++
T Consensus 70 ~~~piI~lt~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~l 115 (119)
T d1zh2a1 70 SAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVAL 115 (119)
T ss_dssp CCCCEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHH
T ss_pred cCCcEEEEeccCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHH
Confidence 4567775222223333444343323346666789999999998777
No 75
>d2gy9b1 c.23.15.1 (B:8-225) Ribosomal protein S2 {Escherichia coli [TaxId: 562]}
Probab=46.65 E-value=46 Score=23.98 Aligned_cols=30 Identities=20% Similarity=0.070 Sum_probs=21.3
Q ss_pred hCCEEEEcCccCCCCCCCCHHHHHhhCCcEEEC
Q 043830 136 LTPIAVIGGSFLPGLAGHNISEAAAAGCAVLTG 168 (248)
Q Consensus 136 ~ad~~~v~~s~~e~~gg~~~lEA~a~G~Pvi~~ 168 (248)
.-|++|+.....+ -..+-||..+|+|+|+-
T Consensus 149 lPd~vii~d~~~~---~~ai~Ea~~l~IP~I~i 178 (218)
T d2gy9b1 149 LPDALFVIDADHE---HIAIKEANNLGIPVFAI 178 (218)
T ss_dssp CCCEEEESCTTTT---HHHHHHHHHTTCCEEEC
T ss_pred CCceeeecccccc---HHHHHHHHHcCCCEEEE
Confidence 3678777543322 24589999999999973
No 76
>d1gq2a1 c.2.1.7 (A:280-580) Mitochondrial NAD(P)-dependent malic enzyme {Domestic pigeon (Columba livia) [TaxId: 8932]}
Probab=46.63 E-value=15 Score=28.31 Aligned_cols=30 Identities=17% Similarity=0.243 Sum_probs=19.0
Q ss_pred CCEEEEcCccCCCCCCCCHHHHHh--hCCcEEE
Q 043830 137 TPIAVIGGSFLPGLAGHNISEAAA--AGCAVLT 167 (248)
Q Consensus 137 ad~~~v~~s~~e~~gg~~~lEA~a--~G~Pvi~ 167 (248)
.++ +++.|...|.....++++|+ +..|+|.
T Consensus 104 ptv-liG~s~~~g~ft~evv~~ma~~~~~PIIF 135 (298)
T d1gq2a1 104 PTV-LIGVAAIGGAFTQQILQDMAAFNKRPIIF 135 (298)
T ss_dssp CSE-EEECSCCTTCSCHHHHHHHHHHCSSCEEE
T ss_pred hhe-eEecccccCcCCHHHHHHHHhhCCCCEEE
Confidence 456 45666544332344788887 5789997
No 77
>d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]}
Probab=43.06 E-value=36 Score=21.56 Aligned_cols=20 Identities=5% Similarity=0.129 Sum_probs=16.2
Q ss_pred ceEEEcCCHHHHHHHHHHhh
Q 043830 187 KSVLQVSGKSELEEALSQLF 206 (248)
Q Consensus 187 g~~~~~~~~~~l~~~i~~ll 206 (248)
+++..|-++++|...|..++
T Consensus 99 ~yl~KP~~~~~L~~~i~~~l 118 (121)
T d1mvoa_ 99 DYMTKPFSPREVNARVKAIL 118 (121)
T ss_dssp EEEESSCCHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHH
Confidence 45666779999999998876
No 78
>d1dz3a_ c.23.1.1 (A:) Sporulation response regulator Spo0A {Bacillus stearothermophilus [TaxId: 1422]}
Probab=42.71 E-value=37 Score=21.62 Aligned_cols=69 Identities=17% Similarity=0.220 Sum_probs=35.7
Q ss_pred CCEEEEcCccCCCCCCCCHHHHHhh----CCcEEECCCCCChHHHHHHHHhcCC-ceEEEcCCHHHHHHHHHHhhh
Q 043830 137 TPIAVIGGSFLPGLAGHNISEAAAA----GCAVLTGPHIGHYSNMVSAMQRLNP-KSVLQVSGKSELEEALSQLFS 207 (248)
Q Consensus 137 ad~~~v~~s~~e~~gg~~~lEA~a~----G~Pvi~~~~~~~~~~~~~~~~~~g~-g~~~~~~~~~~l~~~i~~ll~ 207 (248)
-|++++--.. +++.|..+++.+-. ..|||+....+.. +......+.|. +++..|-+.++|.++|.+++.
T Consensus 48 ~dlillD~~m-P~~dG~e~~~~ir~~~~~~~~ii~~t~~~~~-~~~~~a~~~Ga~~~l~KP~~~~~L~~~i~~v~~ 121 (123)
T d1dz3a_ 48 PDILLLDIIM-PHLDGLAVLERIRAGFEHQPNVIMLTAFGQE-DVTKKAVELGASYFILKPFDMENLAHHIRQVYG 121 (123)
T ss_dssp CSEEEEESCC-SSSCHHHHHHHHHHHCSSCCEEEEEEETTCH-HHHHHHHHTTCEEEEECSSCCTTHHHHHHHHHH
T ss_pred CCEEEEcCCC-CCCCHHHHHHHHHhcCCCCCeEEEEECcCCH-HHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHc
Confidence 4554442111 33446666666532 2356642111222 33333334443 455666799999999987764
No 79
>d1ydhb_ c.129.1.1 (B:) Hypothetical protein At5g11950 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=41.38 E-value=51 Score=22.84 Aligned_cols=82 Identities=16% Similarity=0.096 Sum_probs=46.3
Q ss_pred cEEEEcCh-hHHHHHHhhCCEEEEcCccCCCCCCC-CHHHHHh------hCCcEEECCCCCChHHHH---HHHHhcCC--
Q 043830 120 NVYVVDTL-GELRQLYKLTPIAVIGGSFLPGLAGH-NISEAAA------AGCAVLTGPHIGHYSNMV---SAMQRLNP-- 186 (248)
Q Consensus 120 ~v~~~~~~-~~l~~~y~~ad~~~v~~s~~e~~gg~-~~lEA~a------~G~Pvi~~~~~~~~~~~~---~~~~~~g~-- 186 (248)
.++.++++ .....++..||.+++.|. |+|-+ -++|++. ..+|+++-+..+-+.... +.+.+.|.
T Consensus 81 ~~~~~~~~~~Rk~~m~~~sdafIvlPG---G~GTLdEl~e~l~l~ql~~~~kpiiiln~~gfw~~l~~~l~~~~~~g~i~ 157 (181)
T d1ydhb_ 81 DVRVVADMHERKAAMAQEAEAFIALPG---GYGTMEELLEMITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEEGFIK 157 (181)
T ss_dssp EEEEESSHHHHHHHHHHHCSEEEECSC---SHHHHHHHHHHHHHHHHTSCCCEEEEECGGGTTHHHHHHHHHHHHHTSSC
T ss_pred cceeeccHHHHHHHHHHhCeeEEEeCC---ccchHHHHHHHHHHHHhcccCCCeEEEecCccHHHHHHHHHHHHHCCCCC
Confidence 45556655 457788999999888642 11111 1577773 567887644322333222 33333321
Q ss_pred ----ceEEEcCCHHHHHHHHHH
Q 043830 187 ----KSVLQVSGKSELEEALSQ 204 (248)
Q Consensus 187 ----g~~~~~~~~~~l~~~i~~ 204 (248)
.....++|++++.+.|..
T Consensus 158 ~~~~~~~~~~d~~ee~~~~l~~ 179 (181)
T d1ydhb_ 158 PGARNIVVSAPTAKELMEKMEE 179 (181)
T ss_dssp HHHHTTEEEESSHHHHHHHHHH
T ss_pred HHHcCeEEEeCCHHHHHHHHHh
Confidence 034566898888777654
No 80
>d1iiba_ c.44.2.1 (A:) Enzyme IIB-cellobiose {Escherichia coli [TaxId: 562]}
Probab=40.42 E-value=15 Score=23.35 Aligned_cols=70 Identities=6% Similarity=-0.111 Sum_probs=43.7
Q ss_pred EEEecCCCC---CHHHHHHHHHhcCCceEEecccCCCCCCccEEEEcChhHHHHHHhhCCEEEEcCccCCCCCCCCHHHH
Q 043830 82 TIIVPRHPQ---HGKEIAQKLQKEGEVVALRSRHEKLMPRTNVYVVDTLGELRQLYKLTPIAVIGGSFLPGLAGHNISEA 158 (248)
Q Consensus 82 lvivG~~~~---~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~y~~ad~~~v~~s~~e~~gg~~~lEA 158 (248)
+++++.|.. ....+++.+.+.|++..+ .-. +.+++.......|+++++|-.. + -..-++.
T Consensus 5 lL~C~~G~STs~l~~km~~~a~~~~~~~~i-------------~A~-~~~~~~~~~~~~DviLl~PQv~--~-~~~~i~~ 67 (103)
T d1iiba_ 5 YLFSSAGMSTSLLVSKMRAQAEKYEVPVII-------------EAF-PETLAGEKGQNADVVLLGPQIA--Y-MLPEIQR 67 (103)
T ss_dssp EEEESCHHHHHHHHHHHHHHHHHTTCCEEE-------------EEE-EGGGHHHHHTTCSEEEECGGGG--G-GHHHHHH
T ss_pred EEECCCCccHHHHHHHHHHHHHHcCCCEEE-------------EEe-chHHHhhhccCCCEEEECHHHH--H-HHHHHHH
Confidence 455555433 225677778887776322 221 2357777888999998877542 1 1234777
Q ss_pred HhhCCcEEEC
Q 043830 159 AAAGCAVLTG 168 (248)
Q Consensus 159 ~a~G~Pvi~~ 168 (248)
.+-++||.+-
T Consensus 68 ~~~~~pv~vI 77 (103)
T d1iiba_ 68 LLPNKPVEVI 77 (103)
T ss_dssp HCTTSCEEEC
T ss_pred HcCCCCEEEe
Confidence 7779999873
No 81
>d1vhca_ c.1.10.1 (A:) Hypothetical protein HI0047 {Haemophilus influenzae [TaxId: 727]}
Probab=37.22 E-value=23 Score=25.60 Aligned_cols=39 Identities=8% Similarity=-0.021 Sum_probs=19.5
Q ss_pred hhHHHHHHhh-CCEEEEcCccCCCCCCCCHHHHHh---hCCcEEE
Q 043830 127 LGELRQLYKL-TPIAVIGGSFLPGLAGHNISEAAA---AGCAVLT 167 (248)
Q Consensus 127 ~~~l~~~y~~-ad~~~v~~s~~e~~gg~~~lEA~a---~G~Pvi~ 167 (248)
..|+...+.. +|++=++|.-. .||...+-++. -+.|++.
T Consensus 117 psEi~~A~~~G~~~vK~FPA~~--~gG~~~lkal~~p~p~~~~~p 159 (212)
T d1vhca_ 117 PMAIEIALEMGISAVKFFPAEA--SGGVKMIKALLGPYAQLQIMP 159 (212)
T ss_dssp HHHHHHHHHTTCCEEEETTTTT--TTHHHHHHHHHTTTTTCEEEE
T ss_pred HHHHHHHHHCCCCEEEEccccc--cchHHHHHHHhccccCCeEEe
Confidence 3455555444 66665565421 23454444433 3566665
No 82
>d1lu4a_ c.47.1.10 (A:) Soluble secreted antigen MPT53 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=36.02 E-value=49 Score=21.13 Aligned_cols=55 Identities=5% Similarity=-0.081 Sum_probs=34.4
Q ss_pred CCeEEE-EeCCC-cchHHHHHHHHHHHHHhCCCeEEEEecCCCCCHHHHHHHHHhcCCc
Q 043830 49 HRQVWM-ASSIH-RGEEKVMLAVHKVLMQKNPNLVTIIVPRHPQHGKEIAQKLQKEGEV 105 (248)
Q Consensus 49 ~~~v~l-~~~~~-~~~~~~ll~a~~~l~~~~~~~~lvivG~~~~~~~~l~~~~~~~~l~ 105 (248)
++++++ +-+.| +.-. ..+..+.++.+.++++.++.+..+.. ...+++.+++.++.
T Consensus 24 Gk~vll~F~a~wC~~C~-~~~p~l~~~~~~~~~v~~v~v~~~~~-~~~~~~~~~~~~~~ 80 (134)
T d1lu4a_ 24 GKPAVLWFWTPWCPFCN-AEAPSLSQVAAANPAVTFVGIATRAD-VGAMQSFVSKYNLN 80 (134)
T ss_dssp TSCEEEEEECTTCHHHH-HHHHHHHHHHHHCTTSEEEEEECSSC-HHHHHHHHHHHTCC
T ss_pred CCEEEEEEeecccCCce-ecchhHHHHhhhhccccccccccccc-hhhhhhhhhhhccc
Confidence 566655 44566 2221 23455556666788888777765444 37888888888775
No 83
>d3clsc1 c.26.2.3 (C:1-262) Small, beta subunit of electron transfer flavoprotein ETFP {Methylophilus methylotrophus [TaxId: 17]}
Probab=35.77 E-value=78 Score=23.36 Aligned_cols=98 Identities=16% Similarity=0.146 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHhC-CCeEEEEecCCCCCHHHHHHHHHhcCCceEEecccCCCCCCccEEEEcCh--h-HHHHHHh--hC
Q 043830 64 KVMLAVHKVLMQKN-PNLVTIIVPRHPQHGKEIAQKLQKEGEVVALRSRHEKLMPRTNVYVVDTL--G-ELRQLYK--LT 137 (248)
Q Consensus 64 ~~ll~a~~~l~~~~-~~~~lvivG~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~--~-~l~~~y~--~a 137 (248)
+..|++.-+|+.+. .+..++++.-||...++..+.+-.+|....++........ .|+. . -+..+.. ..
T Consensus 40 ~~AlE~Al~lke~~gg~~~Vtvvt~Gp~~a~~~Lr~alAmGaD~avli~d~~~~~------~d~~~tA~~lA~~i~~~~~ 113 (262)
T d3clsc1 40 DFSLEEAMKIKESSDTDVEVVVVSVGPDRVDESLRKCLAKGADRAVRVWDDAAEG------SDAIVVGRILTEVIKKEAP 113 (262)
T ss_dssp HHHHHHHHHHHHHCSSCCEEEEEEESCTTHHHHHHHHHHTTCSEEEEECCGGGTT------CCHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhcCCCceEEEEEeccchhHHHHHHHHHhcCCCeeEEEecccccc------chHHHHHHHHHHHhhccCC
Confidence 36677777776653 3445555544455545555555567765443322110000 0100 0 1122221 35
Q ss_pred CEEEEcCccCCCCCCCC-HHHHHhhCCcEEE
Q 043830 138 PIAVIGGSFLPGLAGHN-ISEAAAAGCAVLT 167 (248)
Q Consensus 138 d~~~v~~s~~e~~gg~~-~lEA~a~G~Pvi~ 167 (248)
|++|+|--..++-.|++ +.=|-.+|.|.|+
T Consensus 114 DLIl~G~~s~D~~~gqvg~~lAe~Lg~P~vt 144 (262)
T d3clsc1 114 DMVFAGVQSSDQAYASTGISVASYLNWPHAA 144 (262)
T ss_dssp SEEEEESCCTTTCCCCHHHHHHHHHTCCEEE
T ss_pred cEEEEeeeccCCCcchHHHHHHHHcCCceEE
Confidence 88777543334334665 5677788888885
No 84
>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}
Probab=34.40 E-value=24 Score=25.35 Aligned_cols=72 Identities=11% Similarity=-0.048 Sum_probs=41.4
Q ss_pred hCCCeEEEEec-CCCCCHHHHHHHHHhcCCceEEecccCCCCCCccEEEEcChhHHHHHHh--hCCEEEEcCccCCCCCC
Q 043830 76 KNPNLVTIIVP-RHPQHGKEIAQKLQKEGEVVALRSRHEKLMPRTNVYVVDTLGELRQLYK--LTPIAVIGGSFLPGLAG 152 (248)
Q Consensus 76 ~~~~~~lvivG-~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~y~--~ad~~~v~~s~~e~~gg 152 (248)
..+++.++-+- ..+ +..+..+++.+++. ..++..+...+| +. ..|++++.+.-.. ..
T Consensus 55 ~~~~~~ivav~d~~~---~~a~~~~~~~~i~~------------~~~~~~~d~~el---l~~~~iD~V~I~tp~~~--H~ 114 (221)
T d1h6da1 55 GCQHSRIEALVSGNA---EKAKIVAAEYGVDP------------RKIYDYSNFDKI---AKDPKIDAVYIILPNSL--HA 114 (221)
T ss_dssp TCSSEEEEEEECSCH---HHHHHHHHHTTCCG------------GGEECSSSGGGG---GGCTTCCEEEECSCGGG--HH
T ss_pred hCCCceEEEEecCCH---HHHHHHHHhhcccc------------ccccccCchhhh---cccccceeeeeccchhh--hh
Confidence 34678777443 332 45666777777752 223333333343 43 4678777433211 12
Q ss_pred CCHHHHHhhCCcEEE
Q 043830 153 HNISEAAAAGCAVLT 167 (248)
Q Consensus 153 ~~~lEA~a~G~Pvi~ 167 (248)
..+++||..|++|++
T Consensus 115 ~~~~~al~~gk~v~~ 129 (221)
T d1h6da1 115 EFAIRAFKAGKHVMC 129 (221)
T ss_dssp HHHHHHHHTTCEEEE
T ss_pred hHHHHhhhcchhhhc
Confidence 347999999999998
No 85
>d1mxsa_ c.1.10.1 (A:) KDPG aldolase {Pseudomonas putida [TaxId: 303]}
Probab=34.35 E-value=22 Score=25.83 Aligned_cols=19 Identities=16% Similarity=-0.055 Sum_probs=9.8
Q ss_pred hhHHHHHHhh-CCEEEEcCc
Q 043830 127 LGELRQLYKL-TPIAVIGGS 145 (248)
Q Consensus 127 ~~~l~~~y~~-ad~~~v~~s 145 (248)
..|+...++. +|++=++|.
T Consensus 120 psEi~~A~~~G~~~vKlFPA 139 (216)
T d1mxsa_ 120 PSEIMMGYALGYRRFKLFPA 139 (216)
T ss_dssp HHHHHHHHTTTCCEEEETTH
T ss_pred HHHHHHHHHCCCCEEEeccc
Confidence 3455554444 566555553
No 86
>d2nx2a1 c.129.1.2 (A:1-177) Hypothetical protein YpsA {Bacillus subtilis [TaxId: 1423]}
Probab=34.14 E-value=30 Score=24.21 Aligned_cols=33 Identities=21% Similarity=0.288 Sum_probs=21.7
Q ss_pred EEEeCCCcchHHHHHHHHHHHHHhCCCeEEEEe
Q 043830 53 WMASSIHRGEEKVMLAVHKVLMQKNPNLVTIIV 85 (248)
Q Consensus 53 ~l~~~~~~~~~~~ll~a~~~l~~~~~~~~lviv 85 (248)
+++.|.-.+-.-...+++..+++.+|+++|+++
T Consensus 45 ~~i~g~alG~D~~aAevvl~lk~~yp~ikL~~~ 77 (177)
T d2nx2a1 45 WILISGQLGVELWAAEAAYDLQEEYPDLKVAVI 77 (177)
T ss_dssp EEEECCCTTHHHHHHHHHHTTTTTCTTCEEEEE
T ss_pred EEEEcCcccHHHHHHHHHHHHhhhCCCceEEEE
Confidence 433333333333567888888899999988776
No 87
>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}
Probab=33.99 E-value=35 Score=20.98 Aligned_cols=30 Identities=7% Similarity=0.152 Sum_probs=20.9
Q ss_pred HhhCCEEEEcCccCCCCCCCC-HHHHHhhCCcEE
Q 043830 134 YKLTPIAVIGGSFLPGLAGHN-ISEAAAAGCAVL 166 (248)
Q Consensus 134 y~~ad~~~v~~s~~e~~gg~~-~lEA~a~G~Pvi 166 (248)
...+|++++++...+ .++ +.+|-..|+|||
T Consensus 65 i~~~d~vV~S~AI~~---~npel~~A~~~gipii 95 (96)
T d1p3da1 65 IEGASVVVVSSAIKD---DNPELVTSKQKRIPVI 95 (96)
T ss_dssp GTTCSEEEECTTSCT---TCHHHHHHHHTTCCEE
T ss_pred CCCCCEEEECCCcCC---CCHHHHHHHHcCCCEE
Confidence 456898766544432 233 799999999997
No 88
>d2b4aa1 c.23.1.1 (A:2-119) Hypothetical protein BH3024 {Bacillus halodurans [TaxId: 86665]}
Probab=32.49 E-value=26 Score=22.36 Aligned_cols=105 Identities=17% Similarity=0.210 Sum_probs=55.5
Q ss_pred eEEEEecCCCCCHHHHHHHHHhcCCceEEecccCCCCCCccEEEEcChhH-HHHHHhh--CCEEEEcCccCCCCCCCCHH
Q 043830 80 LVTIIVPRHPQHGKEIAQKLQKEGEVVALRSRHEKLMPRTNVYVVDTLGE-LRQLYKL--TPIAVIGGSFLPGLAGHNIS 156 (248)
Q Consensus 80 ~~lvivG~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~-l~~~y~~--ad~~~v~~s~~e~~gg~~~l 156 (248)
++++||=+.+.....+...+++.|.... ....-.+ +..+... -|++++--.+ ++..|..++
T Consensus 3 ~rILvVdDd~~~~~~l~~~L~~~g~~v~---------------~~~~~~~al~~l~~~~~~dliilD~~l-p~~~G~el~ 66 (118)
T d2b4aa1 3 FRVTLVEDEPSHATLIQYHLNQLGAEVT---------------VHPSGSAFFQHRSQLSTCDLLIVSDQL-VDLSIFSLL 66 (118)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEE---------------EESSHHHHHHTGGGGGSCSEEEEETTC-TTSCHHHHH
T ss_pred CEEEEEECCHHHHHHHHHHHHhcCCCeE---------------EECCHHHHHHHHHhcCCCCEEEEeCCC-CCCCHHHHH
Confidence 5677777766554666677777666422 2222122 3334332 4786663333 333455555
Q ss_pred HHHh---hCCcEEE-CCCCCChHHHHHHHHhcCCceEEEcCCHHHHHHHHHH
Q 043830 157 EAAA---AGCAVLT-GPHIGHYSNMVSAMQRLNPKSVLQVSGKSELEEALSQ 204 (248)
Q Consensus 157 EA~a---~G~Pvi~-~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~l~~~i~~ 204 (248)
+.+- ..+|||. |... . +... ....|.|++..|-++++|..+|+.
T Consensus 67 ~~ir~~~~~~pii~lt~~~-~--~~~~-~~~~~~dyl~KP~~~~eL~~~i~~ 114 (118)
T d2b4aa1 67 DIVKEQTKQPSVLILTTGR-H--ELIE-SSEHNLSYLQKPFAISELRAAIDY 114 (118)
T ss_dssp HHHTTSSSCCEEEEEESCC-----CCC-CSSSCEEEEESSCCHHHHHHHHHH
T ss_pred HHHHhcCCCCcEEEEECCc-c--HHHH-HhhcCCCEEECCCCHHHHHHHHHH
Confidence 5553 4578886 2111 1 1111 122333466667899999888864
No 89
>d2hqsc1 d.79.7.1 (C:68-173) Peptidoglycan-associated lipoprotein, PAL, periplasmic domain {Escherichia coli [TaxId: 562]}
Probab=32.14 E-value=12 Score=23.63 Aligned_cols=23 Identities=13% Similarity=-0.117 Sum_probs=19.3
Q ss_pred HHHHHHHHHcCCCCCCeEEcCCc
Q 043830 2 TLQAIRFQLLEASPFTINFSGDL 24 (248)
Q Consensus 2 ~~~~~~l~~~gv~~~kI~v~gn~ 24 (248)
...++.|...|+++++|.+.|.+
T Consensus 60 ~~V~~~L~~~Gi~~~ri~~~g~G 82 (106)
T d2hqsc1 60 NAVKMYLQGKGVSADQISIVSYG 82 (106)
T ss_dssp HHHHHHHHHTTCCGGGEEEEECT
T ss_pred hHHHHHHHhcCCccceEEEEEec
Confidence 35678899999999999998754
No 90
>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}
Probab=31.97 E-value=50 Score=20.84 Aligned_cols=26 Identities=27% Similarity=0.312 Sum_probs=12.3
Q ss_pred EEEEecCCCCCHHHHHHHHHhcCCceE
Q 043830 81 VTIIVPRHPQHGKEIAQKLQKEGEVVA 107 (248)
Q Consensus 81 ~lvivG~~~~~~~~l~~~~~~~~l~~~ 107 (248)
++.|+|.|. ...-+...++++|+...
T Consensus 13 kigIlGgGQ-L~rMla~aA~~lG~~v~ 38 (111)
T d1kjqa2 13 RVMLLGSGE-LGKEVAIECQRLGVEVI 38 (111)
T ss_dssp EEEEESCSH-HHHHHHHHHHTTTCEEE
T ss_pred EEEEEeCCH-HHHHHHHHHHHCCCEEE
Confidence 556666542 11233344556665543
No 91
>d1w85i_ a.9.1.1 (I:) E3/E1 binding domain of dihydrolipoyl acetyltransferase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=27.45 E-value=20 Score=18.71 Aligned_cols=22 Identities=5% Similarity=-0.235 Sum_probs=18.3
Q ss_pred CHHHHHHHHHcCCCCCCeEEcC
Q 043830 1 STLQAIRFQLLEASPFTINFSG 22 (248)
Q Consensus 1 s~~~~~~l~~~gv~~~kI~v~g 22 (248)
|+.++....+.|++.++|.-+|
T Consensus 5 sP~arkla~e~gidl~~i~GTG 26 (42)
T d1w85i_ 5 MPSVRKYAREKGVDIRLVQGTG 26 (42)
T ss_dssp CHHHHHHHHHTTCCTTTSCCCS
T ss_pred CHHHHHHHHHcCCCHHHCccCC
Confidence 6788888889999998877666
No 92
>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}
Probab=27.01 E-value=90 Score=21.33 Aligned_cols=49 Identities=14% Similarity=0.236 Sum_probs=32.4
Q ss_pred CeEEEEecCCCCCHHHHHHHHHhcCCceEEecccCCCCCCccEEEEcC-hhHHHHHHhhCCEEEE
Q 043830 79 NLVTIIVPRHPQHGKEIAQKLQKEGEVVALRSRHEKLMPRTNVYVVDT-LGELRQLYKLTPIAVI 142 (248)
Q Consensus 79 ~~~lvivG~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~-~~~l~~~y~~ad~~~v 142 (248)
.-..+|+|++.--...+..++.+.|-. |+..+. ..++..+.+.||++++
T Consensus 37 GK~v~VIGrS~~VG~Pla~lL~~~gat---------------Vt~~h~~t~~l~~~~~~ADivI~ 86 (166)
T d1b0aa1 37 GLNAVVIGASNIVGRPMSMELLLAGCT---------------TTVTHRFTKNLRHHVENADLLIV 86 (166)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTTCE---------------EEEECSSCSCHHHHHHHCSEEEE
T ss_pred cceEEEEeccccccHHHHHHHHHhhcc---------------ccccccccchhHHHHhhhhHhhh
Confidence 446788888776667777777665533 333332 2367888899999765
No 93
>d1duvg2 c.78.1.1 (G:151-333) Ornithine transcarbamoylase {Escherichia coli [TaxId: 562]}
Probab=26.80 E-value=49 Score=22.76 Aligned_cols=14 Identities=0% Similarity=-0.114 Sum_probs=11.6
Q ss_pred HHHHHHhhCCEEEE
Q 043830 129 ELRQLYKLTPIAVI 142 (248)
Q Consensus 129 ~l~~~y~~ad~~~v 142 (248)
++...+..+|++++
T Consensus 67 d~~~a~~~aDvvyt 80 (183)
T d1duvg2 67 DVAKGVEGADFIYT 80 (183)
T ss_dssp CHHHHHTTCSEEEE
T ss_pred chhhccccCCEEEE
Confidence 67888999999765
No 94
>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}
Probab=26.25 E-value=78 Score=20.39 Aligned_cols=34 Identities=9% Similarity=0.046 Sum_probs=20.2
Q ss_pred hhCCEEEEcCccCCCCCCCCHHHHHhhCCcEEECCC
Q 043830 135 KLTPIAVIGGSFLPGLAGHNISEAAAAGCAVLTGPH 170 (248)
Q Consensus 135 ~~ad~~~v~~s~~e~~gg~~~lEA~a~G~Pvi~~~~ 170 (248)
..+|+++=+++- +++ -.++--+...|+|+|+|..
T Consensus 40 ~~~DVvIDFS~p-~~~-~~~l~~~~~~~~p~ViGTT 73 (128)
T d1vm6a3 40 DSPDVVIDFSSP-EAL-PKTVDLCKKYRAGLVLGTT 73 (128)
T ss_dssp SCCSEEEECSCG-GGH-HHHHHHHHHHTCEEEECCC
T ss_pred ccCCEEEEecCH-HHH-HHHHHHHHhcCCCEEEEcC
Confidence 457885544321 211 1234566789999999764
No 95
>d1dxha2 c.78.1.1 (A:151-335) Ornithine transcarbamoylase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=25.22 E-value=77 Score=21.77 Aligned_cols=14 Identities=7% Similarity=-0.019 Sum_probs=11.6
Q ss_pred HHHHHHhhCCEEEE
Q 043830 129 ELRQLYKLTPIAVI 142 (248)
Q Consensus 129 ~l~~~y~~ad~~~v 142 (248)
++.+.+..+|++++
T Consensus 67 d~~eai~~aDvVyt 80 (185)
T d1dxha2 67 DPKEAVKGVDFVHT 80 (185)
T ss_dssp CHHHHTTTCSEEEE
T ss_pred ChhhccccccEEEe
Confidence 67888999999765
No 96
>d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]}
Probab=24.52 E-value=80 Score=24.46 Aligned_cols=55 Identities=13% Similarity=0.094 Sum_probs=32.4
Q ss_pred HHHHHHhh--CCEEEEcCccCCCCCCCCHHHHHhhCCcEEE---CCCCCCh-----HHHHHHHHhcC
Q 043830 129 ELRQLYKL--TPIAVIGGSFLPGLAGHNISEAAAAGCAVLT---GPHIGHY-----SNMVSAMQRLN 185 (248)
Q Consensus 129 ~l~~~y~~--ad~~~v~~s~~e~~gg~~~lEA~a~G~Pvi~---~~~~~~~-----~~~~~~~~~~g 185 (248)
.+..++.. -|+++|.+...|.+ -..+=|..+++||+- |...++. .|......+.-
T Consensus 77 ~~~~~~~~~kPD~v~v~GDr~e~l--a~a~aa~~~~ipi~HiegG~~s~~~~~~~pde~~R~~iskl 141 (376)
T d1f6da_ 77 GLKPILAEFKPDVVLVHGDTTTTL--ATSLAAFYQRIPVGHVEAGLRTGDLYSPWPEEANRTLTGHL 141 (376)
T ss_dssp HHHHHHHHHCCSEEEEETTCHHHH--HHHHHHHTTTCCEEEESCCCCCSCTTSSTTHHHHHHHHHHT
T ss_pred hhHHHHHhccCcceeeeccccchh--hHHHHHHhhCceEEEEecccccccccccCchhhhhhhhccc
Confidence 34445543 78888877665532 234667888999996 3333342 45555555433
No 97
>d1tqja_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Synechocystis sp. PCC 6803 [TaxId: 1148]}
Probab=23.90 E-value=1.2e+02 Score=21.59 Aligned_cols=70 Identities=16% Similarity=0.275 Sum_probs=38.4
Q ss_pred hCCCeEEEEecC-CCCCHHHHHHHHHhcCCceEEecccCCCCCCccEEEEcChhHHHHHHhhCCEEEEcCccCCCCCCCC
Q 043830 76 KNPNLVTIIVPR-HPQHGKEIAQKLQKEGEVVALRSRHEKLMPRTNVYVVDTLGELRQLYKLTPIAVIGGSFLPGLAGHN 154 (248)
Q Consensus 76 ~~~~~~lvivG~-~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~y~~ad~~~v~~s~~e~~gg~~ 154 (248)
..++...+-+-. ......+....+++.|.....-.. +++ +.+.+..++...|.+.+.+. .+||+|+.
T Consensus 82 ~g~~~i~~H~E~~~~~~~~~~~~~i~~~g~~~Gial~-----p~T------~~~~l~~~l~~~d~vlvM~V-~pG~~GQ~ 149 (221)
T d1tqja_ 82 AGADIISVHVEHNASPHLHRTLCQIRELGKKAGAVLN-----PST------PLDFLEYVLPVCDLILIMSV-NPGFGGQS 149 (221)
T ss_dssp HTCSEEEEECSTTTCTTHHHHHHHHHHTTCEEEEEEC-----TTC------CGGGGTTTGGGCSEEEEESS-CC----CC
T ss_pred ccceEEEEeeccccChhhHHHHHHHHHCCCCEEEEec-----CCC------cHHHHHHHHhhhcEEEEEEe-cCCCCCcc
Confidence 356654444432 122346677778888876432211 111 24678888999999877654 68888887
Q ss_pred HHH
Q 043830 155 ISE 157 (248)
Q Consensus 155 ~lE 157 (248)
..+
T Consensus 150 f~~ 152 (221)
T d1tqja_ 150 FIP 152 (221)
T ss_dssp CCG
T ss_pred cch
Confidence 543
No 98
>d1v8aa_ c.72.1.2 (A:) Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=23.80 E-value=1.3e+02 Score=22.06 Aligned_cols=118 Identities=15% Similarity=0.161 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHhCCCeEEEEecCCCCCHHHHHHHHHhcCCceEEecccCCCCCCccEEEEcChhHHHHHHhhCCEEEEc
Q 043830 64 KVMLAVHKVLMQKNPNLVTIIVPRHPQHGKEIAQKLQKEGEVVALRSRHEKLMPRTNVYVVDTLGELRQLYKLTPIAVIG 143 (248)
Q Consensus 64 ~~ll~a~~~l~~~~~~~~lvivG~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~y~~ad~~~v~ 143 (248)
+.+.+++.+++++.|-++. +-. .=-.....+-+-..|=.. + ..+...|+.++.+.||.+++.
T Consensus 2 ~~i~~~l~~~r~~~PlVh~--iTN-~V~~~~~An~~La~GasP--------------~-Ma~~~~E~~e~~~~a~al~iN 63 (264)
T d1v8aa_ 2 KFIIEALKRVRERRPLVHN--ITN-FVVMNTTANALLALGASP--------------V-MAHAEEELEEMIRLADAVVIN 63 (264)
T ss_dssp HHHHHHHHHHHHHCCEEEE--ECC-TTTHHHHHHHHHHHTCEE--------------E-ECCCTTTHHHHHHHCSEEEEE
T ss_pred hHHHHHHHHHHhcCCeEEe--eec-hhhHhhHHHHHHHcCCCc--------------h-hcCCHHHHHHHHHhcCceEee
Confidence 4677888889888883321 222 112233444444444321 2 233446899999999998874
Q ss_pred Cc-cCCCCCCCCHH----HHHhhCCcEEECCCCC---ChH-HHHHHHHhcCCceEEEcCCHHHHHHHH
Q 043830 144 GS-FLPGLAGHNIS----EAAAAGCAVLTGPHIG---HYS-NMVSAMQRLNPKSVLQVSGKSELEEAL 202 (248)
Q Consensus 144 ~s-~~e~~gg~~~l----EA~a~G~Pvi~~~~~~---~~~-~~~~~~~~~g~g~~~~~~~~~~l~~~i 202 (248)
.. ..+. +....+ .|-..|+|+|.-|.+- .++ +....+.... ..+.-.|..++...+
T Consensus 64 ~Gtl~~~-~~~~m~~a~~~A~~~~~PvVLDPVgvgas~~R~~~~~~ll~~~--~~vItgN~~Ei~~L~ 128 (264)
T d1v8aa_ 64 IGTLDSG-WRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSRG--VDVLKGNFGEISALL 128 (264)
T ss_dssp CTTCCHH-HHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHHHHHHHHC--CSEEEEEHHHHHHHH
T ss_pred CCCCCHH-HHHHHHHHHHHHHHcCCCEEEcCcccCcchhHHHHHHHHhccC--CcEEcCCHHHHHHHh
Confidence 32 2111 111122 3345799999965431 111 2333333333 233445777776544
No 99
>d2a6qa1 d.306.1.1 (A:10-92) Antitoxin YefM {Escherichia coli [TaxId: 562]}
Probab=23.64 E-value=71 Score=18.99 Aligned_cols=49 Identities=12% Similarity=0.123 Sum_probs=31.9
Q ss_pred hhCCcEEECCCCCChHHHHHHHHhcCCceEEEcCCHHHHHHHHHHhhhCHHHHHHHHHHHHH
Q 043830 160 AAGCAVLTGPHIGHYSNMVSAMQRLNPKSVLQVSGKSELEEALSQLFSDARVLEAQQMAAKQ 221 (248)
Q Consensus 160 a~G~Pvi~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~ 221 (248)
--+-||+++...+ ....++..++.++|.+++ .||++|..++++.+.-.+
T Consensus 22 ~~~epviItr~~~------------~~~VliS~~d~~sl~ETl-~lls~p~n~~~L~~s~~~ 70 (83)
T d2a6qa1 22 EDHAPILITRQNG------------EACVLMSLEEYNSLEETA-YLLRSPANARRLMDSIDS 70 (83)
T ss_dssp HHTCCEEEECTTS------------CEEEEEEHHHHHHHHHHH-HHHHSHHHHHHHHHHHHH
T ss_pred ccCCeEEEEeCCC------------CCeEEeCHHHHHHHHHHH-HHHcCHHHHHHHHHHHHH
Confidence 4577999875431 111344557888887765 578899988887765444
No 100
>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}
Probab=23.64 E-value=73 Score=19.14 Aligned_cols=61 Identities=10% Similarity=0.011 Sum_probs=35.2
Q ss_pred EEecCCCCCHHHHHHHHHhcCCceEEecccCCCCCCccEEEEcChhHHHHHHhhCCEEEEcCccCCCCCCCC-HHHHHhh
Q 043830 83 IIVPRHPQHGKEIAQKLQKEGEVVALRSRHEKLMPRTNVYVVDTLGELRQLYKLTPIAVIGGSFLPGLAGHN-ISEAAAA 161 (248)
Q Consensus 83 vivG~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~y~~ad~~~v~~s~~e~~gg~~-~lEA~a~ 161 (248)
-+-|.+... .+..+.+++.|++.. .++. +.....+|++++++...+ .++ +.+|-..
T Consensus 27 ~VsGSD~~~-~~~t~~L~~~Gi~i~---~gh~----------------~~~i~~~d~vV~SsAI~~---~npel~~A~~~ 83 (89)
T d1j6ua1 27 DVYGSNIEE-TERTAYLRKLGIPIF---VPHS----------------ADNWYDPDLVIKTPAVRD---DNPEIVRARME 83 (89)
T ss_dssp EEEEECSSC-CHHHHHHHHTTCCEE---SSCC----------------TTSCCCCSEEEECTTCCT---TCHHHHHHHHT
T ss_pred eEEEEeCCC-ChhHHHHHHCCCeEE---eeec----------------ccccCCCCEEEEecCcCC---CCHHHHHHHHc
Confidence 456765444 344445788887521 1111 111246899766555533 233 6899999
Q ss_pred CCcEE
Q 043830 162 GCAVL 166 (248)
Q Consensus 162 G~Pvi 166 (248)
|+||.
T Consensus 84 gIpv~ 88 (89)
T d1j6ua1 84 RVPIE 88 (89)
T ss_dssp TCCEE
T ss_pred CCCcc
Confidence 99986
No 101
>d1g57a_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Escherichia coli [TaxId: 562]}
Probab=23.32 E-value=55 Score=23.42 Aligned_cols=41 Identities=12% Similarity=-0.044 Sum_probs=24.7
Q ss_pred HHHHHhhCCcEEECCCC-------------CChHHHHHHHHhcCCceEEEcCCH
Q 043830 155 ISEAAAAGCAVLTGPHI-------------GHYSNMVSAMQRLNPKSVLQVSGK 195 (248)
Q Consensus 155 ~lEA~a~G~Pvi~~~~~-------------~~~~~~~~~~~~~g~g~~~~~~~~ 195 (248)
.+|++..|.|||+.+.. .--++.+.++...+.|+++.+-+.
T Consensus 15 ai~alk~G~~Viv~Dd~~RE~EgDlv~~Ae~~t~e~i~fm~~~~~GliC~a~~~ 68 (209)
T d1g57a_ 15 ALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITE 68 (209)
T ss_dssp HHHHHHTTCCEEEEC----CCCEEEEEETTTCCHHHHHHHHHHBCSCCEEEECH
T ss_pred HHHHHHCCCEEEEEECCCCCCcccEEEEHHHCCHHHHHHHHHhCCCCEEEcccH
Confidence 58999999999985431 112345555655555565554443
No 102
>d1vr6a1 c.1.10.4 (A:1-338) 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (DAHP synthase, AroG) {Thermotoga maritima [TaxId: 2336]}
Probab=23.13 E-value=1.5e+02 Score=22.65 Aligned_cols=102 Identities=13% Similarity=0.084 Sum_probs=54.9
Q ss_pred CCeEEEEeC--CCcchHHHHHHHHHHHHHhCCCeEEEEecC-----------CCC--CHHHHHHHHHhcCCceEEecccC
Q 043830 49 HRQVWMASS--IHRGEEKVMLAVHKVLMQKNPNLVTIIVPR-----------HPQ--HGKEIAQKLQKEGEVVALRSRHE 113 (248)
Q Consensus 49 ~~~v~l~~~--~~~~~~~~ll~a~~~l~~~~~~~~lvivG~-----------~~~--~~~~l~~~~~~~~l~~~~~~~~~ 113 (248)
+.++++++| ..+. .+.+++....+++. ..+++.-|. |+. -.+-+++...+.|++...-.
T Consensus 92 ~~~l~lIAGPC~vES-~e~~~~~A~~lke~--g~~~~r~g~fKpRtsp~sf~g~g~~gL~~l~~~k~~~glpvvTdV--- 165 (338)
T d1vr6a1 92 NGYFTIIAGPCSVEG-REMLMETAHFLSEL--GVKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAADKYGMYVVTEA--- 165 (338)
T ss_dssp TTEEEEEEECSBCCC-HHHHHHHHHHHHHT--TCCEEECBSCCCCCSTTSCCCCTHHHHHHHHHHHHHHTCEEEEEC---
T ss_pred CCceEEEecCCCCCC-HHHHHHHHHHHHHh--CccccccceecccccccccccchHHHHHHHHHHHhhcCceeEEec---
Confidence 444444443 2333 35677777777654 345555442 111 12334444556777632111
Q ss_pred CCCCCccEEEEcChhHHHHHHhhCCEEEEcCccCCCCCCCCHHHHHhhCCcEEECC
Q 043830 114 KLMPRTNVYVVDTLGELRQLYKLTPIAVIGGSFLPGLAGHNISEAAAAGCAVLTGP 169 (248)
Q Consensus 114 ~~~~~~~v~~~~~~~~l~~~y~~ad~~~v~~s~~e~~gg~~~lEA~a~G~Pvi~~~ 169 (248)
-...++..+...+|++-+++-..-.+ --+.|+...|+||++-.
T Consensus 166 -----------~~~~~~~~~~e~~DilQI~A~~~~n~--~LL~~~g~t~kpV~lKk 208 (338)
T d1vr6a1 166 -----------LGEDDLPKVAEYADIIQIGARNAQNF--RLLSKAGSYNKPVLLKR 208 (338)
T ss_dssp -----------SSGGGHHHHHHHCSEEEECGGGTTCH--HHHHHHHTTCSCEEEEC
T ss_pred -----------cchhhhhhhhceeeeEEechhhccCH--HHHHHhhccCCcEEecC
Confidence 12246677788899977754332110 11578888999999943
No 103
>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}
Probab=23.06 E-value=1.1e+02 Score=20.84 Aligned_cols=77 Identities=9% Similarity=0.002 Sum_probs=41.4
Q ss_pred CCCeEEEEeCCCcchHHHHHHHHHHHHHhCCCeEEEEecCCCCCHHHHHHHHHhc-CCceEEecccCCCCCCccEEEEcC
Q 043830 48 AHRQVWMASSIHRGEEKVMLAVHKVLMQKNPNLVTIIVPRHPQHGKEIAQKLQKE-GEVVALRSRHEKLMPRTNVYVVDT 126 (248)
Q Consensus 48 ~~~~v~l~~~~~~~~~~~ll~a~~~l~~~~~~~~lvivG~~~~~~~~l~~~~~~~-~l~~~~~~~~~~~~~~~~v~~~~~ 126 (248)
.++.+++.++..-=+. .+.+. +.+. ..+++++++.+++.+++.+.+... .+.. ...-+..
T Consensus 22 ~gK~vlItGasgGIG~-~ia~~---la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-------------~~~d~~~ 82 (191)
T d1luaa1 22 KGKKAVVLAGTGPVGM-RSAAL---LAGE--GAEVVLCGRKLDKAQAAADSVNKRFKVNV-------------TAAETAD 82 (191)
T ss_dssp TTCEEEEETTTSHHHH-HHHHH---HHHT--TCEEEEEESSHHHHHHHHHHHHHHHTCCC-------------EEEECCS
T ss_pred CCCEEEEECCCHHHHH-HHHHH---HHhh--ccchhhcccchHHHHHHHHHHHhccchhh-------------hhhhccc
Confidence 3666776664432121 22223 3333 467899999776655555554432 1110 0111223
Q ss_pred hhHHHHHHhhCCEEEEc
Q 043830 127 LGELRQLYKLTPIAVIG 143 (248)
Q Consensus 127 ~~~l~~~y~~ad~~~v~ 143 (248)
..++..++..+|++|-.
T Consensus 83 ~~~~~~~~~~iDilin~ 99 (191)
T d1luaa1 83 DASRAEAVKGAHFVFTA 99 (191)
T ss_dssp HHHHHHHTTTCSEEEEC
T ss_pred HHHHHHHhcCcCeeeec
Confidence 46888999999996653
No 104
>d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=22.99 E-value=1e+02 Score=20.55 Aligned_cols=14 Identities=7% Similarity=-0.062 Sum_probs=11.3
Q ss_pred HHHHHHhhCCEEEE
Q 043830 129 ELRQLYKLTPIAVI 142 (248)
Q Consensus 129 ~l~~~y~~ad~~~v 142 (248)
++.+.+..||++++
T Consensus 65 d~~ea~~~adviy~ 78 (163)
T d1pvva2 65 DPVKAVKDADVIYT 78 (163)
T ss_dssp CHHHHTTTCSEEEE
T ss_pred CHHHHhhhccEEee
Confidence 66788999999765
No 105
>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}
Probab=22.41 E-value=1e+02 Score=20.33 Aligned_cols=88 Identities=10% Similarity=0.104 Sum_probs=45.4
Q ss_pred HhCCCeEEEEecCCCCCHHHHHHHHHhcCCceEEecccCCCCCCccEEEEcChhHHHHHHhhCCEEEEcCccCCCCCCCC
Q 043830 75 QKNPNLVTIIVPRHPQHGKEIAQKLQKEGEVVALRSRHEKLMPRTNVYVVDTLGELRQLYKLTPIAVIGGSFLPGLAGHN 154 (248)
Q Consensus 75 ~~~~~~~lvivG~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~y~~ad~~~v~~s~~e~~gg~~ 154 (248)
+..+++.++++...+ +..+...++++.... + +...++-+ ...|++++.+.-. .--..
T Consensus 22 ~~~~~~~~~~~d~~~---~~~~~~~~~~~~~~~---------------~-~~~~~ll~--~~iD~V~I~tp~~--~H~~~ 78 (167)
T d1xeaa1 22 AQWPDIELVLCTRNP---KVLGTLATRYRVSAT---------------C-TDYRDVLQ--YGVDAVMIHAATD--VHSTL 78 (167)
T ss_dssp TTSTTEEEEEECSCH---HHHHHHHHHTTCCCC---------------C-SSTTGGGG--GCCSEEEECSCGG--GHHHH
T ss_pred HhCCCcEEEEEECCH---HHHHHHHHhcccccc---------------c-ccHHHhcc--cccceeccccccc--ccccc
Confidence 345788877665433 455566666665321 1 11123321 2468877743211 00123
Q ss_pred HHHHHhhCCcEEE-CCCCCChH---HHHHHHHhcC
Q 043830 155 ISEAAAAGCAVLT-GPHIGHYS---NMVSAMQRLN 185 (248)
Q Consensus 155 ~lEA~a~G~Pvi~-~~~~~~~~---~~~~~~~~~g 185 (248)
+.+++-.|+||++ -|-..+.. ++.+...+.+
T Consensus 79 ~~~al~~gk~V~~EKP~~~~~~e~~~l~~~a~~~~ 113 (167)
T d1xeaa1 79 AAFFLHLGIPTFVDKPLAASAQECENLYELAEKHH 113 (167)
T ss_dssp HHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTT
T ss_pred cccccccccccccCCCCcCCHHHHHHHHHHHHHcC
Confidence 6889999999998 22222333 3444444454
No 106
>d1euca2 c.23.4.1 (A:131-306) Succinyl-CoA synthetase, alpha-chain, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=22.23 E-value=66 Score=22.02 Aligned_cols=24 Identities=21% Similarity=0.295 Sum_probs=18.3
Q ss_pred HHHhcCCceEEEcCCHHHHHHHHHHhh
Q 043830 180 AMQRLNPKSVLQVSGKSELEEALSQLF 206 (248)
Q Consensus 180 ~~~~~g~g~~~~~~~~~~l~~~i~~ll 206 (248)
.+.+.| ++.+++.++|.+.|.+.+
T Consensus 147 afrqaG---vi~v~s~~El~~~l~~~~ 170 (176)
T d1euca2 147 ALQSAG---VVVSMSPAQLGTTIYKEF 170 (176)
T ss_dssp HHHHTT---CEECSSGGGHHHHHHHHH
T ss_pred HHHHCC---CeEcCCHHHHHHHHHHHH
Confidence 355555 577899999999987766
No 107
>d1r1ma_ d.79.7.1 (A:) Outer membrane protein class 4, RmpM, C-terminal domain {Neisseria meningitidis [TaxId: 487]}
Probab=22.00 E-value=22 Score=23.64 Aligned_cols=23 Identities=13% Similarity=-0.165 Sum_probs=19.6
Q ss_pred HHHHHHHHHcCCCCCCeEEcCCc
Q 043830 2 TLQAIRFQLLEASPFTINFSGDL 24 (248)
Q Consensus 2 ~~~~~~l~~~gv~~~kI~v~gn~ 24 (248)
++.+++|...|+++++|.+.|.+
T Consensus 70 ~~V~~~L~~~Gi~~~ri~~~g~G 92 (140)
T d1r1ma_ 70 YVVANNLVSNGVPVSRISAVGLG 92 (140)
T ss_dssp HHHHHHHHHTTCCGGGEEEEECT
T ss_pred HHHHHHHHHcCCCcCeEEEEEEe
Confidence 46788899999999999998854
No 108
>d1snna_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Archaeon Methanocaldococcus jannaschii [TaxId: 2190]}
Probab=21.51 E-value=59 Score=23.44 Aligned_cols=44 Identities=11% Similarity=-0.030 Sum_probs=28.3
Q ss_pred HHHHHhhCCcEEECCCCC-----C--------hHHHHHHHHhcCCceEEEcCCHHHH
Q 043830 155 ISEAAAAGCAVLTGPHIG-----H--------YSNMVSAMQRLNPKSVLQVSGKSEL 198 (248)
Q Consensus 155 ~lEA~a~G~Pvi~~~~~~-----~--------~~~~~~~~~~~g~g~~~~~~~~~~l 198 (248)
.++++..|.|||+.+... + -++.+.++...+.|+++.+-+.+..
T Consensus 6 ai~~lk~G~~Viv~Dd~~REnEgDlv~~Ae~~t~e~i~fm~~~~~Glic~a~~~~~~ 62 (219)
T d1snna_ 6 AIEALKKGEIILVYDSDEREGETDMVVASQFITPEHIRIMRKDAGGLICTALHPDIC 62 (219)
T ss_dssp HHHHHHTTCCEEEECCTTTTCCEEEEEEGGGCCHHHHHHHHHHTEEEEEEEECHHHH
T ss_pred HHHHHHCCCEEEEEeCCCCCCcccEEEEhhhCCHHHHHHHHHcCCCCEEecCCHHHH
Confidence 589999999999965321 1 2355667777776666665444433
No 109
>d2aizp1 d.79.7.1 (P:1-134) Peptidoglycan-associated lipoprotein, PAL, periplasmic domain {Haemophilus influenzae [TaxId: 727]}
Probab=21.41 E-value=21 Score=23.52 Aligned_cols=23 Identities=0% Similarity=-0.372 Sum_probs=19.1
Q ss_pred HHHHHHHHHcCCCCCCeEEcCCc
Q 043830 2 TLQAIRFQLLEASPFTINFSGDL 24 (248)
Q Consensus 2 ~~~~~~l~~~gv~~~kI~v~gn~ 24 (248)
...++.|.+.|+++++|.+.|-+
T Consensus 88 ~~V~~~L~~~Gi~~~ri~~~g~G 110 (134)
T d2aizp1 88 DAVKGYLAGKGVDAGKLGTVSYG 110 (134)
T ss_dssp HHHHHHHHHTTCCGGGEEEEECT
T ss_pred HHHHHHHHHcCCccccceeEEcc
Confidence 35678899999999999998743
No 110
>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.40 E-value=1.2e+02 Score=20.71 Aligned_cols=49 Identities=16% Similarity=0.151 Sum_probs=32.7
Q ss_pred CeEEEEecCCCCCHHHHHHHHHhcCCceEEecccCCCCCCccEEEEcC-hhHHHHHHhhCCEEEE
Q 043830 79 NLVTIIVPRHPQHGKEIAQKLQKEGEVVALRSRHEKLMPRTNVYVVDT-LGELRQLYKLTPIAVI 142 (248)
Q Consensus 79 ~~~lvivG~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~-~~~l~~~y~~ad~~~v 142 (248)
.-..+|+|++.--...+..++.+.|-. |...+. ..++..+.+.||++++
T Consensus 39 Gk~vvVIGrS~iVGrPLa~lL~~~gat---------------Vt~~~~~t~~l~~~~~~aDivi~ 88 (170)
T d1a4ia1 39 GRHAVVVGRSKIVGAPMHDLLLWNNAT---------------VTTCHSKTAHLDEEVNKGDILVV 88 (170)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHTTCE---------------EEEECTTCSSHHHHHTTCSEEEE
T ss_pred cceEEEEecCCccchHHHHHHHhccCc---------------eEEEecccccHHHHHhhccchhh
Confidence 346788898777667788777766533 233331 2367788889999765
No 111
>d1k4ia_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Magnaporthe grisea [TaxId: 148305]}
Probab=20.79 E-value=65 Score=23.14 Aligned_cols=41 Identities=12% Similarity=-0.002 Sum_probs=25.3
Q ss_pred HHHHHhhCCcEEECCCCC-------------ChHHHHHHHHhcCCceEEEcCCH
Q 043830 155 ISEAAAAGCAVLTGPHIG-------------HYSNMVSAMQRLNPKSVLQVSGK 195 (248)
Q Consensus 155 ~lEA~a~G~Pvi~~~~~~-------------~~~~~~~~~~~~g~g~~~~~~~~ 195 (248)
.++++..|+|||+.++.. --++.+.++...+.|+++.+-+.
T Consensus 7 ai~~l~~G~~viv~Dd~~REnEgDlv~~Ae~~t~e~i~fm~~~~~Glic~a~~~ 60 (216)
T d1k4ia_ 7 VIQAFKNGEFVVVLDDPSRENEADLIIAAESVTTEQMAFMVRHSSGLICAPLTP 60 (216)
T ss_dssp HHHHHHTTCCEEEECCTTTTCCEEEEEEGGGCCHHHHHHHHHHBCSCCEEEECH
T ss_pred HHHHHHCCCeEEEEeCCCCCCcccEEEEhHhCCHHHHHHHHHhCCCCEEEeehH
Confidence 589999999999865320 12345555666555665554333
No 112
>d1d4oa_ c.31.1.4 (A:) Transhydrogenase domain III (dIII) {Cow (Bos taurus) [TaxId: 9913]}
Probab=20.61 E-value=1.3e+02 Score=20.71 Aligned_cols=121 Identities=16% Similarity=0.173 Sum_probs=66.4
Q ss_pred HHHHHHHHHHhCCCeEEEEe---cCCCCCHHHHHHHHHhcCCceEEecccCCCCCCccEEEEcChhHHHHHHhhCCEEEE
Q 043830 66 MLAVHKVLMQKNPNLVTIIV---PRHPQHGKEIAQKLQKEGEVVALRSRHEKLMPRTNVYVVDTLGELRQLYKLTPIAVI 142 (248)
Q Consensus 66 ll~a~~~l~~~~~~~~lviv---G~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~y~~ad~~~v 142 (248)
+-+....|.++..+++|-|- |+-|-...- ++.+-+++. +.++ .++++..-+..+|+++|
T Consensus 38 v~el~~~L~~~g~~V~faIHPVAGRMPGHmNV---LLAEA~VpY------------d~v~---emdeIN~~f~~~DvalV 99 (177)
T d1d4oa_ 38 IADLVKMLSEQGKKVRFGIHPVAGRMPGQLNV---LLAEAGVPY------------DIVL---EMDEINHDFPDTDLVLV 99 (177)
T ss_dssp HHHHHHHHHHTTCEEEEEECTTCSSSTTHHHH---HHHHHTCCG------------GGEE---EHHHHGGGGGGCSEEEE
T ss_pred HHHHHHHHHHcCCeEEEEeccccccccchhhh---hhhhcCCCH------------HHHh---ChHhhCcchhhccEEEE
Confidence 33444446667778899885 454443333 334445542 2222 23466666999999887
Q ss_pred cCcc--------C-C--CCCCCCHHHHHhhCCcEEECCCC-CChHHHHH-HHHhcCCceEEEcCCHHHHHHHHHHhh
Q 043830 143 GGSF--------L-P--GLAGHNISEAAAAGCAVLTGPHI-GHYSNMVS-AMQRLNPKSVLQVSGKSELEEALSQLF 206 (248)
Q Consensus 143 ~~s~--------~-e--~~gg~~~lEA~a~G~Pvi~~~~~-~~~~~~~~-~~~~~g~g~~~~~~~~~~l~~~i~~ll 206 (248)
-+.. . + ...|++++|..-+..-+++-+.. .++.++-. .+-... .....+|+.+..+.|..-+
T Consensus 100 IGANDvVNPaA~~d~~SpI~GMPvl~v~kak~viv~KRsm~~GyaGv~NpLF~~~n--t~MlfGDAk~~~~~l~~~l 174 (177)
T d1d4oa_ 100 IGANDTVNSAAQEDPNSIIAGMPVLEVWKSKQVIVMKRSLGVGYAAVDNPIFYKPN--TAMLLGDAKKTCDALQAKV 174 (177)
T ss_dssp ESCSGGGCTHHHHCTTSTTTTCCCCCGGGSSCEEEEESSSCCCTTCCCCGGGGSTT--EEEEESCHHHHHHHHHHHH
T ss_pred eccccccCCcccCCCCCccCCCceeEhhhCCEEEEEECCCCCCccCCcCcceecCC--cEEEechHHHHHHHHHHHH
Confidence 2211 1 1 13488999999998888872211 12222111 111222 3455688877766665444
No 113
>d1ni5a1 c.26.2.5 (A:0-226) tRNA-Ile-lysidine synthetase, TilS, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=20.20 E-value=97 Score=21.79 Aligned_cols=60 Identities=15% Similarity=0.061 Sum_probs=32.5
Q ss_pred CCCeEEEEeCCCcchHHHHHHHHHHHHHhCCCeEEEEe--cCC--CC---CHHHHHHHHHhcCCceEE
Q 043830 48 AHRQVWMASSIHRGEEKVMLAVHKVLMQKNPNLVTIIV--PRH--PQ---HGKEIAQKLQKEGEVVAL 108 (248)
Q Consensus 48 ~~~~v~l~~~~~~~~~~~ll~a~~~l~~~~~~~~lviv--G~~--~~---~~~~l~~~~~~~~l~~~~ 108 (248)
.+++|+++.|....- -.|+..+..+....+++.+..+ =++ ++ ....+++.+.++|++..+
T Consensus 12 ~~kkvlva~SGG~DS-~~Ll~ll~~~~~~~~~~~l~~~~vdh~~r~~s~~~~~~~~~~~~~~~i~~~i 78 (227)
T d1ni5a1 12 TSRQILVAFSGGLDS-TVLLHQLVQWRTENPGVALRAIHVHHGLSANADAWVTHCENVCQQWQVPLVV 78 (227)
T ss_dssp TCSEEEEECCSBHHH-HHHHHHHHHHHTTSTTCEEEEEEECCSCCSSHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCcEEEEecCcHHH-HHHHHHHHHHHHhCCCceEEEEEeCCCCCcchhhhHHHHHHHHhhccCccee
Confidence 466788777643322 2456666666555555554433 221 22 124467778888887544
Done!