BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043831
(243 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225435209|ref|XP_002284873.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-1 [Vitis
vinifera]
Length = 242
Score = 344 bits (883), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 161/235 (68%), Positives = 191/235 (81%), Gaps = 4/235 (1%)
Query: 1 MGPRWKGRASEAKSSGR--SHVQNHLRFTFLSIQSEAHAVLAGYSALLAVEAEQTELLNR 58
MGPRWKG+ +EAK+ S + + L+ + +S++ +L+G S LL AEQTELLNR
Sbjct: 1 MGPRWKGKGAEAKALAEPMSEIVSQLQSSL--TRSDSQGLLSGCSVLLEAGAEQTELLNR 58
Query: 59 ACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETF 118
+CFGR ++TAEKDKQW+QL MEE FYLCHSL CLKIVGEDN KND+ELWQYMK+++ETF
Sbjct: 59 SCFGRPVITAEKDKQWFQLSMEEAFYLCHSLGCLKIVGEDNHLKNDEELWQYMKSRRETF 118
Query: 119 PLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVW 178
P Y AYSHLR KNWVVRSGSQYGVDFVAYRHHP+LVHSEYAVLVL+E + NGRLRVW
Sbjct: 119 PDFYMAYSHLRIKNWVVRSGSQYGVDFVAYRHHPALVHSEYAVLVLSEENENANGRLRVW 178
Query: 179 SDIHCTVRLCGGVAKTLLILTINKNGQGTATPSCLEQYAVEERTISRWSPEQCRE 233
SD CT+RLCG VAKTLL++ INKNG G TP CL++Y+VEERTI+RWS EQCRE
Sbjct: 179 SDFDCTIRLCGSVAKTLLVIHINKNGHGATTPLCLKKYSVEERTITRWSAEQCRE 233
>gi|255570767|ref|XP_002526336.1| tRNA-splicing endonuclease subunit Sen2-2, putative [Ricinus
communis]
gi|223534295|gb|EEF36007.1| tRNA-splicing endonuclease subunit Sen2-2, putative [Ricinus
communis]
Length = 237
Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 159/233 (68%), Positives = 187/233 (80%)
Query: 1 MGPRWKGRASEAKSSGRSHVQNHLRFTFLSIQSEAHAVLAGYSALLAVEAEQTELLNRAC 60
MG RWKG+ SEAK++ + + IQ +AH +L+G S LLAVE+EQTELL RAC
Sbjct: 1 MGTRWKGKGSEAKAAADPMSKIISQLCSSLIQFDAHGLLSGCSVLLAVESEQTELLTRAC 60
Query: 61 FGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPL 120
FGR ++T+EKDKQW+QLG+EE FYL +SLKC+KIV EDN +D ELWQ+MK++K TFP
Sbjct: 61 FGRPMITSEKDKQWFQLGIEEAFYLSYSLKCIKIVSEDNCCISDLELWQFMKSQKPTFPD 120
Query: 121 LYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSD 180
YKAYSHLR KNWVVR GSQYGVDFVAYRHHPSLVHSEYAVLVL+E + NGRLRVWSD
Sbjct: 121 FYKAYSHLRMKNWVVRPGSQYGVDFVAYRHHPSLVHSEYAVLVLSEEDANANGRLRVWSD 180
Query: 181 IHCTVRLCGGVAKTLLILTINKNGQGTATPSCLEQYAVEERTISRWSPEQCRE 233
HCT+RLCG VAKTLL+L INKN GT PSCLE+Y+VEERT +RWSP+Q RE
Sbjct: 181 FHCTLRLCGSVAKTLLVLGINKNCHGTTLPSCLEKYSVEERTFARWSPQQSRE 233
>gi|224105207|ref|XP_002313727.1| predicted protein [Populus trichocarpa]
gi|222850135|gb|EEE87682.1| predicted protein [Populus trichocarpa]
Length = 235
Score = 330 bits (845), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 159/234 (67%), Positives = 186/234 (79%), Gaps = 3/234 (1%)
Query: 1 MGPRWKGRASEAKSSGRSHVQNHLRFTFLSIQSEAHAVLAGYSALLAVEAEQTELLNRAC 60
MGPRWKG+ +EAK+ + + +QS A A L+G S LLAVE EQTELL RAC
Sbjct: 1 MGPRWKGKGAEAKALADPMSEIVSQLQSSLLQSNACASLSGCSVLLAVETEQTELLTRAC 60
Query: 61 FGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPL 120
FG+ I+TAEK+KQW+QLG+EE FYLC+SLKCLKI GEDN KND +LW YMK KKE FP
Sbjct: 61 FGKPIITAEKEKQWFQLGLEEAFYLCYSLKCLKIAGEDNFVKNDLDLWLYMKLKKEKFPD 120
Query: 121 LYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSD 180
YKAYSHLR KNWV+R G QYGVDFVAY+HHPSLVHSEYAV+VL+E G+ GRLRVWSD
Sbjct: 121 FYKAYSHLRMKNWVLRPGLQYGVDFVAYQHHPSLVHSEYAVIVLSE---GDTGRLRVWSD 177
Query: 181 IHCTVRLCGGVAKTLLILTINKNGQGTATPSCLEQYAVEERTISRWSPEQCRED 234
HCT+RLCG VAKTLLIL ++KNG G +PSCLE+Y+VEE TI+RWSPEQ R+D
Sbjct: 178 FHCTIRLCGSVAKTLLILNVDKNGHGAISPSCLERYSVEECTITRWSPEQSRDD 231
>gi|118483103|gb|ABK93461.1| unknown [Populus trichocarpa]
Length = 235
Score = 328 bits (841), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 158/234 (67%), Positives = 186/234 (79%), Gaps = 3/234 (1%)
Query: 1 MGPRWKGRASEAKSSGRSHVQNHLRFTFLSIQSEAHAVLAGYSALLAVEAEQTELLNRAC 60
MGPRWKG+ +EAK+ + + +QS A A L+G S LLAVE E+TELL RAC
Sbjct: 1 MGPRWKGKGAEAKALADPMSEIVSQLQSSLLQSNACASLSGCSVLLAVETEKTELLTRAC 60
Query: 61 FGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPL 120
FG+ I+TAEK+KQW+QLG+EE FYLC+SLKCLKI GEDN KND +LW YMK KKE FP
Sbjct: 61 FGKPIITAEKEKQWFQLGLEEAFYLCYSLKCLKIAGEDNFVKNDLDLWLYMKLKKEKFPD 120
Query: 121 LYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSD 180
YKAYSHLR KNWV+R G QYGVDFVAY+HHPSLVHSEYAV+VL+E G+ GRLRVWSD
Sbjct: 121 FYKAYSHLRMKNWVLRPGLQYGVDFVAYQHHPSLVHSEYAVIVLSE---GDTGRLRVWSD 177
Query: 181 IHCTVRLCGGVAKTLLILTINKNGQGTATPSCLEQYAVEERTISRWSPEQCRED 234
HCT+RLCG VAKTLLIL ++KNG G +PSCLE+Y+VEE TI+RWSPEQ R+D
Sbjct: 178 FHCTIRLCGSVAKTLLILNVDKNGHGAISPSCLERYSVEECTITRWSPEQSRDD 231
>gi|449463691|ref|XP_004149565.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-2-like [Cucumis
sativus]
Length = 281
Score = 327 bits (837), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 157/241 (65%), Positives = 182/241 (75%), Gaps = 5/241 (2%)
Query: 1 MGPRWKGRASEAKSSGR--SHVQNHLRFTFLSIQSEAHAVLAGYSALLAVEAEQTELLNR 58
M PRWKG+ASEAK+ S+ HL+ +F I S A +L+G L + EQT+LLNR
Sbjct: 43 MAPRWKGKASEAKALADPISNTLLHLQSSF--IHSNAQGLLSGSIILYLADEEQTDLLNR 100
Query: 59 ACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETF 118
CFGR I+TAEKDKQW+Q GMEE FYL + L CLKIV + KN ELW+YMK +K TF
Sbjct: 101 TCFGRPILTAEKDKQWFQFGMEEAFYLSYHLNCLKIVDGQDCEKNFQELWRYMKTQKATF 160
Query: 119 PLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGE-NGRLRV 177
P Y AY HLR KNWVVR GSQYGVDFVAYRHHPSLVHSE+AVLVL EG D NGRLRV
Sbjct: 161 PEFYIAYRHLRLKNWVVRPGSQYGVDFVAYRHHPSLVHSEFAVLVLCEGRDSNGNGRLRV 220
Query: 178 WSDIHCTVRLCGGVAKTLLILTINKNGQGTATPSCLEQYAVEERTISRWSPEQCREDPAT 237
WSD CTVRLCG VAKTLL+LT+N NG G +PSCL+ Y++EERT++RWSPEQCRE+PA
Sbjct: 221 WSDFLCTVRLCGSVAKTLLVLTVNDNGSGFVSPSCLDSYSIEERTVTRWSPEQCRENPAK 280
Query: 238 V 238
V
Sbjct: 281 V 281
>gi|449529481|ref|XP_004171728.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-2-like [Cucumis
sativus]
Length = 281
Score = 325 bits (834), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 156/241 (64%), Positives = 181/241 (75%), Gaps = 5/241 (2%)
Query: 1 MGPRWKGRASEAKSSGR--SHVQNHLRFTFLSIQSEAHAVLAGYSALLAVEAEQTELLNR 58
M PRWKG+ASEAK+ S+ HL+ +F I S A +L+G L + EQT+LLNR
Sbjct: 43 MAPRWKGKASEAKALADPISNTVLHLQSSF--IHSNAQGLLSGSIILYLADEEQTDLLNR 100
Query: 59 ACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETF 118
CFGR I+TAEKDKQW+Q GMEE FYL + L CLKIV + KN ELW+YMK +K TF
Sbjct: 101 TCFGRPILTAEKDKQWFQFGMEEAFYLSYHLNCLKIVDGQDCEKNFQELWRYMKTQKATF 160
Query: 119 PLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGE-NGRLRV 177
P Y AY HLR KNWVVR GSQYGVDFVAYRHHPSLVHSE+AVLVL E D NGRLRV
Sbjct: 161 PEFYIAYRHLRLKNWVVRPGSQYGVDFVAYRHHPSLVHSEFAVLVLCEATDSNGNGRLRV 220
Query: 178 WSDIHCTVRLCGGVAKTLLILTINKNGQGTATPSCLEQYAVEERTISRWSPEQCREDPAT 237
WSD CTVRLCG VAKTLL+LT+N NG G +PSCL+ Y++EERT++RWSPEQCRE+PA
Sbjct: 221 WSDFLCTVRLCGSVAKTLLVLTVNDNGSGFVSPSCLDSYSIEERTVTRWSPEQCRENPAK 280
Query: 238 V 238
V
Sbjct: 281 V 281
>gi|357509813|ref|XP_003625195.1| tRNA-splicing endonuclease subunit Sen2-2 [Medicago truncatula]
gi|124360132|gb|ABN08148.1| tRNA intron endonuclease, catalytic C-terminal [Medicago
truncatula]
gi|355500210|gb|AES81413.1| tRNA-splicing endonuclease subunit Sen2-2 [Medicago truncatula]
Length = 246
Score = 290 bits (743), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 140/243 (57%), Positives = 169/243 (69%), Gaps = 10/243 (4%)
Query: 1 MGPRWKGRASEAKSSGRSHVQNHLRFTFLS------IQSEAHAVLAGYSALLAVEAEQTE 54
M PRWKG+ +++K + +S +QS L+ L V+AEQ +
Sbjct: 1 MAPRWKGKDAKSKKEAEAEALKEPMSKIISQLQSSLVQSNTCGFLSDNCVHLTVQAEQLD 60
Query: 55 LLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKI---VGEDNSTKNDDELWQYM 111
LL++ACFGR + EKD W+QL +EE FYLC+SLKCLKI VG D ND+ELW Y
Sbjct: 61 LLDKACFGRPVRIVEKDMYWFQLTVEEAFYLCYSLKCLKIKINVGADTGPLNDEELWHYF 120
Query: 112 KAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGE 171
++KKETFP YKAYSHLR KNWVVRSG+QYGVD + YRHHP+ VHSEY VLVL+ +DG+
Sbjct: 121 RSKKETFPYFYKAYSHLRMKNWVVRSGAQYGVDLIVYRHHPARVHSEYGVLVLSHDKDGD 180
Query: 172 -NGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGTATPSCLEQYAVEERTISRWSPEQ 230
NGRLRVWSD+HCT RL GGVAKTLL+L +NKNG + CL Y VEERTISRWSPEQ
Sbjct: 181 LNGRLRVWSDVHCTTRLLGGVAKTLLVLYVNKNGNNDESLLCLTNYTVEERTISRWSPEQ 240
Query: 231 CRE 233
CRE
Sbjct: 241 CRE 243
>gi|356508730|ref|XP_003523107.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-1-like [Glycine
max]
Length = 255
Score = 286 bits (733), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 146/256 (57%), Positives = 175/256 (68%), Gaps = 21/256 (8%)
Query: 1 MGPRWKGRAS------------EAKSSGRSHVQNHLRFTFLSIQSEAHAVLAGYSALLAV 48
M PRWKG+ + E S S +Q+ L +QS+ L+G S L V
Sbjct: 1 MAPRWKGKDAKAKKDAQAEALKEPMSKIVSQIQSSL------VQSDTRGFLSGSSVHLVV 54
Query: 49 EAEQTELLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGE--DNSTKNDDE 106
EAEQ LL++ACFG + T EKDK +QL EE FYLC+SLKCLKI + D S++ D+E
Sbjct: 55 EAEQLHLLDKACFGSPVRTVEKDKPRFQLSFEEAFYLCYSLKCLKINNDSDDTSSQTDEE 114
Query: 107 LWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAE 166
LW YMK+KKETFP YKAYSHLR KNWVVRSG+QYG DFV YRHHP+ VHSEY VLVL++
Sbjct: 115 LWHYMKSKKETFPCFYKAYSHLRMKNWVVRSGAQYGADFVVYRHHPARVHSEYGVLVLSD 174
Query: 167 GEDGE-NGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGTATPSCLEQYAVEERTISR 225
ED + NGRLRVWSD+HCT RL GGVAK LL+L +N+NG +P CL Y VEERTI+R
Sbjct: 175 EEDKDLNGRLRVWSDVHCTTRLLGGVAKILLVLYVNRNGGSNESPLCLANYTVEERTITR 234
Query: 226 WSPEQCREDPATVANG 241
W+PEQCRE AN
Sbjct: 235 WNPEQCREKMVVHANS 250
>gi|297746203|emb|CBI16259.3| unnamed protein product [Vitis vinifera]
Length = 232
Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/244 (58%), Positives = 170/244 (69%), Gaps = 33/244 (13%)
Query: 1 MGPRWKGRASEAKSSGR--SHVQNHLRFTFLSIQSEAHAVLAGYSALLAVEAEQTELLNR 58
MGPRWKG+ +EAK+ S + + L+ + +S++ +L+G S LL AEQTELLNR
Sbjct: 1 MGPRWKGKGAEAKALAEPMSEIVSQLQSSL--TRSDSQGLLSGCSVLLEAGAEQTELLNR 58
Query: 59 ACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETF 118
+CFGR ++TAEKDKQW+QL MEE FYLCHSL CLKIVGEDN KND+ELWQYMK+++ETF
Sbjct: 59 SCFGRPVITAEKDKQWFQLSMEEAFYLCHSLGCLKIVGEDNHLKNDEELWQYMKSRRETF 118
Query: 119 PLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVW 178
P Y AYSHLR KNWVVRSGSQYG NGRLRVW
Sbjct: 119 PDFYMAYSHLRIKNWVVRSGSQYG---------------------------NANGRLRVW 151
Query: 179 SDIHCTVRLCGGVAKTLLILTINKNGQGTATPSCLEQYAVEERTISRWSPEQCRE--DPA 236
SD CT+RLCG VAKTLL++ INKNG G TP CL++Y+VEERTI+RWS EQCRE P
Sbjct: 152 SDFDCTIRLCGSVAKTLLVIHINKNGHGATTPLCLKKYSVEERTITRWSAEQCREVQTPE 211
Query: 237 TVAN 240
T +N
Sbjct: 212 TSSN 215
>gi|358248502|ref|NP_001240148.1| uncharacterized protein LOC100810335 [Glycine max]
gi|255634724|gb|ACU17724.1| unknown [Glycine max]
Length = 255
Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 144/255 (56%), Positives = 172/255 (67%), Gaps = 21/255 (8%)
Query: 1 MGPRWKGRAS------------EAKSSGRSHVQNHLRFTFLSIQSEAHAVLAGYSALLAV 48
M PRWKG+ + E S S +Q+ L +QS L+G S LAV
Sbjct: 1 MAPRWKGKDAKAKKDAQAEALKEPMSKIVSQLQSSL------VQSNTCGFLSGSSVHLAV 54
Query: 49 EAEQTELLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGE--DNSTKNDDE 106
AEQ LL++ACFG + T EKDK +QL EE FYLC+SLKCLKI + D S +N +E
Sbjct: 55 GAEQLHLLDKACFGSPVRTVEKDKPRFQLSFEEAFYLCYSLKCLKINNDSDDTSPQNSEE 114
Query: 107 LWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAE 166
LW YMK+KKETFP YKAYSHLR KNWVVRSG+QYG DFV Y HHP+ VHSEY VLVL++
Sbjct: 115 LWHYMKSKKETFPCFYKAYSHLRMKNWVVRSGAQYGADFVVYCHHPARVHSEYGVLVLSD 174
Query: 167 GEDGE-NGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGTATPSCLEQYAVEERTISR 225
GED + NGRLRVWSD+HCT RL GGVAK LL+L +N+NG +P CL Y +EE TI+R
Sbjct: 175 GEDKDLNGRLRVWSDVHCTTRLLGGVAKILLVLYVNRNGSSNESPLCLANYTIEEHTITR 234
Query: 226 WSPEQCREDPATVAN 240
W+PEQCRE AN
Sbjct: 235 WNPEQCREKMVIHAN 249
>gi|297796985|ref|XP_002866377.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297312212|gb|EFH42636.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 248
Score = 269 bits (687), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 130/244 (53%), Positives = 167/244 (68%), Gaps = 6/244 (2%)
Query: 1 MGPRWKGRASEAKSSGRSHVQNHLRFTFLSIQSEAHAVLAGYSALLAVEAEQTELLNRAC 60
M PRWK + +EAK+ ++ ++E+ L+ + LLAVE EQ ELL+R C
Sbjct: 6 MAPRWKWKGAEAKALAEPISKSVSELQLSLAETESSGTLSSSNVLLAVEPEQAELLDRCC 65
Query: 61 FGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPL 120
FGR +++AEK K+W QL EE FYL ++LKC+KI + +N+ + W YMK+K+ FP+
Sbjct: 66 FGRLVLSAEKVKKWIQLSFEEAFYLLYNLKCIKISLQGRCLENEVDTWLYMKSKRPNFPM 125
Query: 121 LYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSD 180
+KAYSHLR KNWV+RSG QYGVDFVAYRHHPSLVHSEY+VLV + G++ RLRVWSD
Sbjct: 126 FFKAYSHLRSKNWVLRSGLQYGVDFVAYRHHPSLVHSEYSVLV----QSGDSDRLRVWSD 181
Query: 181 IHCTVRLCGGVAKTLLILTINK--NGQGTATPSCLEQYAVEERTISRWSPEQCREDPATV 238
IHC VRL G VAKTLL L +N G+ P CLE + VEE+TISRWSPE RED +
Sbjct: 182 IHCAVRLSGSVAKTLLTLYVNGKFKGEDLNLPVCLENFTVEEQTISRWSPELSREDNPQI 241
Query: 239 ANGI 242
N +
Sbjct: 242 QNKM 245
>gi|42573740|ref|NP_974966.1| tRNA-splicing endonuclease subunit Sen2-2 [Arabidopsis thaliana]
gi|332009914|gb|AED97297.1| tRNA-splicing endonuclease subunit Sen2-2 [Arabidopsis thaliana]
Length = 255
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 129/239 (53%), Positives = 166/239 (69%), Gaps = 6/239 (2%)
Query: 1 MGPRWKGRASEAKSSGRSHVQNHLRFTFLSIQSEAHAVLAGYSALLAVEAEQTELLNRAC 60
M PRWK + +EAK+ ++ ++E+ L+ + LLAVE EQ ELL+R C
Sbjct: 6 MAPRWKWKGAEAKALAEPISKSVSELQLSLAETESSGTLSSCNVLLAVEPEQAELLDRCC 65
Query: 61 FGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPL 120
FGR +++AEK K+W QL EE F+L ++LKC+KI + +N+ + W YMK+K+ FP+
Sbjct: 66 FGRLVLSAEKIKKWIQLSFEEAFFLHYNLKCIKISLQGRCLENEVDTWLYMKSKRPNFPM 125
Query: 121 LYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSD 180
+KAYSHLR KNWV+RSG QYGVDFVAYRHHPSLVHSEY+VLV + G++ RLRVWSD
Sbjct: 126 FFKAYSHLRSKNWVLRSGLQYGVDFVAYRHHPSLVHSEYSVLV----QSGDSDRLRVWSD 181
Query: 181 IHCTVRLCGGVAKTLLILTINKN--GQGTATPSCLEQYAVEERTISRWSPEQCREDPAT 237
IHC VRL G VAKTLL L +N N G+ CLE + VEE+TISRWSPE RED +T
Sbjct: 182 IHCAVRLSGSVAKTLLTLYVNGNFKGEDVNLLVCLENFTVEEQTISRWSPELSREDQST 240
>gi|15238643|ref|NP_200831.1| tRNA-splicing endonuclease subunit Sen2-2 [Arabidopsis thaliana]
gi|75180395|sp|Q9LSS3.1|SEN22_ARATH RecName: Full=tRNA-splicing endonuclease subunit Sen2-2; AltName:
Full=tRNA-intron endonuclease Sen2-2; Short=AtSen2
gi|8885574|dbj|BAA97504.1| tRNA intron endonuclease [Arabidopsis thaliana]
gi|28393426|gb|AAO42135.1| putative tRNA intron endonuclease [Arabidopsis thaliana]
gi|28827218|gb|AAO50453.1| putative tRNA intron endonuclease [Arabidopsis thaliana]
gi|332009913|gb|AED97296.1| tRNA-splicing endonuclease subunit Sen2-2 [Arabidopsis thaliana]
Length = 250
Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 129/239 (53%), Positives = 166/239 (69%), Gaps = 6/239 (2%)
Query: 1 MGPRWKGRASEAKSSGRSHVQNHLRFTFLSIQSEAHAVLAGYSALLAVEAEQTELLNRAC 60
M PRWK + +EAK+ ++ ++E+ L+ + LLAVE EQ ELL+R C
Sbjct: 1 MAPRWKWKGAEAKALAEPISKSVSELQLSLAETESSGTLSSCNVLLAVEPEQAELLDRCC 60
Query: 61 FGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPL 120
FGR +++AEK K+W QL EE F+L ++LKC+KI + +N+ + W YMK+K+ FP+
Sbjct: 61 FGRLVLSAEKIKKWIQLSFEEAFFLHYNLKCIKISLQGRCLENEVDTWLYMKSKRPNFPM 120
Query: 121 LYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSD 180
+KAYSHLR KNWV+RSG QYGVDFVAYRHHPSLVHSEY+VLV + G++ RLRVWSD
Sbjct: 121 FFKAYSHLRSKNWVLRSGLQYGVDFVAYRHHPSLVHSEYSVLV----QSGDSDRLRVWSD 176
Query: 181 IHCTVRLCGGVAKTLLILTINKN--GQGTATPSCLEQYAVEERTISRWSPEQCREDPAT 237
IHC VRL G VAKTLL L +N N G+ CLE + VEE+TISRWSPE RED +T
Sbjct: 177 IHCAVRLSGSVAKTLLTLYVNGNFKGEDVNLLVCLENFTVEEQTISRWSPELSREDQST 235
>gi|6635256|dbj|BAA88627.1| tRNA intron endonuclease [Arabidopsis thaliana]
gi|6635258|dbj|BAA88628.1| tRNA intron endonuclease [Arabidopsis thaliana]
Length = 237
Score = 263 bits (671), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 131/236 (55%), Positives = 164/236 (69%), Gaps = 5/236 (2%)
Query: 1 MGPRWKGRASEAKSSGRSHVQNHLRFTFLSIQSEAHAVLAGYSALLAVEAEQTELLNRAC 60
M PRWK + +EAK+ + L Q+EA L+ + LL+VE+EQ ELL+R C
Sbjct: 1 MAPRWKWKGAEAKALAEPVSKTVLELQSSLTQTEALGFLSSCNVLLSVESEQAELLDRCC 60
Query: 61 FGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPL 120
FGR +V+AEKDK+W QL EE F+L + LKC+KI S +N+ +LW+ M + K+ F +
Sbjct: 61 FGRLVVSAEKDKRWIQLSFEEAFFLFYKLKCIKICLHGRSLENEVDLWRSMSSFKQDFAI 120
Query: 121 LYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSD 180
LYKAYSHLR KNW+VRSG QYGVDFV YRHHPSLVHSEYAVLV + G N RL+VWSD
Sbjct: 121 LYKAYSHLRSKNWIVRSGLQYGVDFVVYRHHPSLVHSEYAVLV--QSISG-NDRLKVWSD 177
Query: 181 IHCTVRLCGGVAKTLLILTINKN--GQGTATPSCLEQYAVEERTISRWSPEQCRED 234
IHC+VRL G VAKTLL+L +N + P CL++Y VEE+TI RWSPE RED
Sbjct: 178 IHCSVRLTGSVAKTLLVLYVNGQVKTENMNLPLCLDEYTVEEQTIRRWSPELSRED 233
>gi|15231186|ref|NP_190145.1| tRNA-splicing endonuclease subunit Sen2-1 [Arabidopsis thaliana]
gi|145332759|ref|NP_001078245.1| tRNA-splicing endonuclease subunit Sen2-1 [Arabidopsis thaliana]
gi|75181816|sp|Q9M1E8.1|SEN21_ARATH RecName: Full=tRNA-splicing endonuclease subunit Sen2-1; AltName:
Full=tRNA-intron endonuclease Sen2-1; Short=AtSen1
gi|6996262|emb|CAB75488.1| putative protein [Arabidopsis thaliana]
gi|62320332|dbj|BAD94688.1| putative protein [Arabidopsis thaliana]
gi|88196761|gb|ABD43023.1| At3g45590 [Arabidopsis thaliana]
gi|332644526|gb|AEE78047.1| tRNA-splicing endonuclease subunit Sen2-1 [Arabidopsis thaliana]
gi|332644527|gb|AEE78048.1| tRNA-splicing endonuclease subunit Sen2-1 [Arabidopsis thaliana]
Length = 237
Score = 262 bits (670), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 133/238 (55%), Positives = 167/238 (70%), Gaps = 9/238 (3%)
Query: 1 MGPRWKGRASEAKSSGR--SHVQNHLRFTFLSIQSEAHAVLAGYSALLAVEAEQTELLNR 58
M PRWK + +EAK+ S + LR + Q+EA L+ + LL+VE+E+ ELL+R
Sbjct: 1 MAPRWKWKGAEAKALAEPVSKTVSELRSSL--TQTEALGFLSSCNVLLSVESEEAELLDR 58
Query: 59 ACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETF 118
CFGR +V AEKDK+W QL EE F+L + LKC+KI S +N+ +LW+ M + K+ F
Sbjct: 59 CCFGRLVVGAEKDKRWIQLSFEEAFFLFYKLKCIKICLHGRSLENEVDLWRSMSSFKQDF 118
Query: 119 PLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVW 178
+LYKAYSHLR KNW+VRSG QYGVDFV YRHHPSLVHSEYAVLV + G N RL+VW
Sbjct: 119 AILYKAYSHLRSKNWIVRSGLQYGVDFVVYRHHPSLVHSEYAVLVQS---IGGNDRLKVW 175
Query: 179 SDIHCTVRLCGGVAKTLLILTINK--NGQGTATPSCLEQYAVEERTISRWSPEQCRED 234
SDIHC+VRL G VAK+LL+L +N+ N + P CLE Y VEE+TI RWSPE RED
Sbjct: 176 SDIHCSVRLTGSVAKSLLVLYVNRKVNTEKMNLPLCLEDYTVEEQTIRRWSPELSRED 233
>gi|297815704|ref|XP_002875735.1| tRNA intron endonuclease [Arabidopsis lyrata subsp. lyrata]
gi|297321573|gb|EFH51994.1| tRNA intron endonuclease [Arabidopsis lyrata subsp. lyrata]
Length = 237
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 128/237 (54%), Positives = 158/237 (66%), Gaps = 7/237 (2%)
Query: 1 MGPRWKGRASEAKSSGRSHVQNHLRFTFLSIQSEAHAVLAGYSALLAVEAEQTELLNRAC 60
M PRWK + +EAK+ + L Q+ A L+ + LL+VE EQ +LL+R C
Sbjct: 1 MAPRWKWKGAEAKALAEPVSETVLELQSSFAQTVASGFLSSCNVLLSVEPEQADLLDRCC 60
Query: 61 FGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPL 120
FGR +V+ EKDK+W QL EE F+L + LKC+KI S +N+ +LW+ M + K F +
Sbjct: 61 FGRPVVSVEKDKRWIQLSFEEAFFLFYKLKCVKISLHGCSLENEVDLWRSMSSFKPNFAI 120
Query: 121 LYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLA-EGEDGENGRLRVWS 179
YKAYSHLR KNW+VRSG QYGVDFV YRHHPSLVHSEYAVLV + G D RL+VWS
Sbjct: 121 SYKAYSHLRSKNWIVRSGLQYGVDFVVYRHHPSLVHSEYAVLVQSISGID----RLKVWS 176
Query: 180 DIHCTVRLCGGVAKTLLILTIN--KNGQGTATPSCLEQYAVEERTISRWSPEQCRED 234
DIHC+VRL G VAKTLL+L +N + P CLE Y VEE+TI RWSPE RED
Sbjct: 177 DIHCSVRLTGSVAKTLLVLYVNGIVKTENMNLPLCLEDYIVEEQTIRRWSPELSRED 233
>gi|218198318|gb|EEC80745.1| hypothetical protein OsI_23228 [Oryza sativa Indica Group]
Length = 425
Score = 242 bits (618), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 125/241 (51%), Positives = 162/241 (67%), Gaps = 9/241 (3%)
Query: 2 GPRWK----GR--ASEAKSSGRSHVQNHLRFTFLSIQSEAHAVLAGYSALLAVEAEQTEL 55
GPRWK G+ AS A ++ S + + L+ +F+S + A G SA+L V EQ +
Sbjct: 137 GPRWKKGKDGKDFASLAAANPMSAIVSELKASFISSKPVAILSGPGGSAVLGVGPEQAVI 196
Query: 56 LNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKK 115
LNRA FG I A K W+QL EE FYLCH+L C+++ DN ++ ELW Y ++
Sbjct: 197 LNRAAFGHAIENATAQKHWFQLSPEEVFYLCHALNCIRVDSLDNKQMSEIELWDYFRSGS 256
Query: 116 ETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGEN--G 173
E+FP +YKAY+HLR KNWVVRSG QYG DFVAYRHHP+LVHSE+AV+V+ EG + N G
Sbjct: 257 ESFPEMYKAYAHLRLKNWVVRSGLQYGADFVAYRHHPALVHSEFAVVVVPEGAEFGNRCG 316
Query: 174 RLRVWSDIHCTVRLCGGVAKTLLILTI-NKNGQGTATPSCLEQYAVEERTISRWSPEQCR 232
RL VWSD+ C +R G VAKTLL+LTI + + ++P CLEQ V ERTI+RW P+QCR
Sbjct: 317 RLEVWSDLLCALRASGSVAKTLLVLTISSSSKCELSSPDCLEQLVVHERTITRWIPQQCR 376
Query: 233 E 233
E
Sbjct: 377 E 377
>gi|115486175|ref|NP_001068231.1| Os11g0602400 [Oryza sativa Japonica Group]
gi|77551800|gb|ABA94597.1| tRNA intron endonuclease, catalytic C-terminal domain containing
protein, expressed [Oryza sativa Japonica Group]
gi|113645453|dbj|BAF28594.1| Os11g0602400 [Oryza sativa Japonica Group]
gi|125577662|gb|EAZ18884.1| hypothetical protein OsJ_34425 [Oryza sativa Japonica Group]
gi|215686429|dbj|BAG87714.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 292
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 122/242 (50%), Positives = 161/242 (66%), Gaps = 12/242 (4%)
Query: 2 GPRWK----GR--ASEAKSSGRSHVQNHLRFTFLSIQSEAHAVLAGYS--ALLAVEAEQT 53
GPRWK G+ ++ A ++ S + L+ +F+S S+ AVL+G A+L VE EQ
Sbjct: 5 GPRWKKGNDGKDFSALAAANPMSVIVAELKASFIS--SKPVAVLSGPGGGAILGVEPEQA 62
Query: 54 ELLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKA 113
+LNRA FG + A K W+QL EE FYLCH L C+++ D +D +LW + ++
Sbjct: 63 VILNRAAFGHAVEIAAAQKHWFQLSPEEVFYLCHVLNCIRVESHDKKQMSDKQLWNHFRS 122
Query: 114 KKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGEN- 172
E+FP +YKAYSHLR KNWVVRSG QYG DFV+YRHHP+LVHSE+AV+V+ EG N
Sbjct: 123 MSESFPEMYKAYSHLRFKNWVVRSGLQYGADFVSYRHHPALVHSEFAVVVVPEGAAFGNR 182
Query: 173 -GRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGTATPSCLEQYAVEERTISRWSPEQC 231
GR+ VWSD+ C +R G VAKTLL+LTI+ ++P CLEQ V ERTI+RW P+QC
Sbjct: 183 CGRMEVWSDLLCALRASGSVAKTLLVLTISSGSCELSSPDCLEQLVVHERTITRWIPQQC 242
Query: 232 RE 233
RE
Sbjct: 243 RE 244
>gi|326533506|dbj|BAK05284.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 292
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 121/240 (50%), Positives = 155/240 (64%), Gaps = 8/240 (3%)
Query: 2 GPRWK----GRASEAKSSGR--SHVQNHLRFTFLSIQSEAHAVLAGYSALLAVEAEQTEL 55
GPRWK G+ A ++ + S + L+ + A G A+L V +Q L
Sbjct: 5 GPRWKKGKDGKNFSALAAAQPMSGIVAKLQSSLKGATLVATLSSQGRDAILGVNPQQATL 64
Query: 56 LNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKK 115
LNRA FGR + A +KQW+QLG EE FYLCH+LKC+ + + ELW ++ +
Sbjct: 65 LNRAAFGRALDNAGAEKQWFQLGAEEVFYLCHALKCISVESASKELMSQGELWDHLCSAS 124
Query: 116 ETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGED--GENG 173
E+FP +YKAYSHLR KNWVVRSG QYG DFVAYRHHP+LVHSE+AV+V+ EG + G G
Sbjct: 125 ESFPEMYKAYSHLRSKNWVVRSGLQYGTDFVAYRHHPALVHSEFAVVVVPEGVEFGGRCG 184
Query: 174 RLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGTATPSCLEQYAVEERTISRWSPEQCRE 233
RL VWSD+ C +R G VAKTLL+LTI+ + ++P CLEQ V ERTISRW +QCRE
Sbjct: 185 RLNVWSDLLCALRASGSVAKTLLVLTISSSNCELSSPDCLEQLVVHERTISRWIAQQCRE 244
>gi|115468364|ref|NP_001057781.1| Os06g0530700 [Oryza sativa Japonica Group]
gi|75112001|sp|Q5Z6B1.1|SEN2_ORYSJ RecName: Full=Probable tRNA-splicing endonuclease subunit Sen2;
AltName: Full=tRNA-intron endonuclease Sen2
gi|53791958|dbj|BAD54220.1| putative tRNA intron endonuclease [Oryza sativa Japonica Group]
gi|53793256|dbj|BAD54480.1| putative tRNA intron endonuclease [Oryza sativa Japonica Group]
gi|113595821|dbj|BAF19695.1| Os06g0530700 [Oryza sativa Japonica Group]
gi|215736852|dbj|BAG95781.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765185|dbj|BAG86882.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 293
Score = 237 bits (605), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 124/241 (51%), Positives = 161/241 (66%), Gaps = 9/241 (3%)
Query: 2 GPRWK----GR--ASEAKSSGRSHVQNHLRFTFLSIQSEAHAVLAGYSALLAVEAEQTEL 55
GPRWK G+ AS A ++ S + + L+ +F+S + A G SA+L V EQ +
Sbjct: 5 GPRWKKGKDGKDFASLAAANPMSAIVSELKASFISSKPVAILSGPGGSAVLGVGPEQAVI 64
Query: 56 LNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKK 115
LNRA FG I A K W+QL EE FYLCH+L C+++ DN ++ ELW Y ++
Sbjct: 65 LNRAAFGHAIENATAQKHWFQLSPEEVFYLCHALNCIRVDSLDNKQMSEIELWDYFRSGS 124
Query: 116 ETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGEN--G 173
E+FP +YKAY+HLR KNWVVRSG QYG DFVAYRHHP+LVHSE+AV+V+ EG + N G
Sbjct: 125 ESFPEMYKAYAHLRLKNWVVRSGLQYGADFVAYRHHPALVHSEFAVVVVPEGAEFGNRCG 184
Query: 174 RLRVWSDIHCTVRLCGGVAKTLLILTI-NKNGQGTATPSCLEQYAVEERTISRWSPEQCR 232
RL VWSD+ C +R G VAKTLL+LTI + + ++P CLEQ V ERTI+RW +QCR
Sbjct: 185 RLEVWSDLLCALRASGSVAKTLLVLTISSSSKCELSSPDCLEQLVVHERTITRWILQQCR 244
Query: 233 E 233
E
Sbjct: 245 E 245
>gi|294460714|gb|ADE75931.1| unknown [Picea sitchensis]
Length = 269
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 122/259 (47%), Positives = 154/259 (59%), Gaps = 26/259 (10%)
Query: 2 GPRWKGRASEAKSSGRSHVQNHLRFTFLSIQSEAHAVLAGYSALLAVEAEQTELLNRACF 61
G RWK R + A + + R QSE + +G + L+ +E T+LLNRACF
Sbjct: 5 GVRWKNRDAAAIADADPMSKIIYRLQSSLEQSETCGLFSGSAVLIQAGSELTKLLNRACF 64
Query: 62 GRHIVTA--------------------EKDKQWYQLGMEEGFYLCHSLKCLKI---VGED 98
GR I+TA D QW+QLGMEE FYL +SL CL I E
Sbjct: 65 GRPIITAPPTSSCSLKGTKYKLDGEQQSADLQWFQLGMEEAFYLNYSLNCLTICRSTREG 124
Query: 99 NSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSE 158
N +E+W++MK +++ F YKAYSHLR KNWVVRSG QYG DFVAYRHHP+LVHSE
Sbjct: 125 RQNLNAEEIWRHMKERQKMFLQHYKAYSHLRAKNWVVRSGLQYGADFVAYRHHPALVHSE 184
Query: 159 YAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGT--ATPSCLEQY 216
YAV++ +E + G+ RL WSD T+RLCG VAKTLL+L+I G T +P+CL+ Y
Sbjct: 185 YAVIISSESDVGQ-ARLTTWSDWQSTLRLCGSVAKTLLVLSIMPRGNKTDETSPTCLDDY 243
Query: 217 AVEERTISRWSPEQCREDP 235
VEE I W E+ REDP
Sbjct: 244 FVEEFEIRGWIAEKHREDP 262
>gi|226503655|ref|NP_001148986.1| tRNA-splicing endonuclease subunit Sen2 [Zea mays]
gi|195623792|gb|ACG33726.1| tRNA-splicing endonuclease subunit Sen2 [Zea mays]
gi|238006304|gb|ACR34187.1| unknown [Zea mays]
gi|413935039|gb|AFW69590.1| tRNA-splicing endonuclease subunit Sen2 [Zea mays]
Length = 335
Score = 216 bits (551), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 114/242 (47%), Positives = 151/242 (62%), Gaps = 12/242 (4%)
Query: 2 GPRWK------GRASEAKSSGRSHVQNHLRFTFLSIQSEAHAVLAGYS--ALLAVEAEQT 53
GPRWK G A+ A ++ S + L+ + SEA A+LA ++ A+L V Q
Sbjct: 36 GPRWKKGKDCKGFAALAAANPMSSIVAELQASLRD--SEAVAILAAHARDAILEVGPRQA 93
Query: 54 ELLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKA 113
LLN A FGR + A + QW+QLG EE F+LCH+LKCL++ + + ELW + +
Sbjct: 94 ALLNGAAFGRAVEGAGAESQWFQLGPEEVFFLCHALKCLRVESNNKTRIGAPELWGLLAS 153
Query: 114 KKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGE--DGE 171
E FP +Y+AY +LR KNWVVRSG QYG DFVAYRHHP+LVHSE+ V+V EG+
Sbjct: 154 GSEQFPEMYRAYQYLRLKNWVVRSGLQYGADFVAYRHHPALVHSEFTVVVAPEGKAFGTR 213
Query: 172 NGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGTATPSCLEQYAVEERTISRWSPEQC 231
R+ VWS++ C +R G VAKTLL+LTI+ + CLEQ V ERTI+RW P+QC
Sbjct: 214 CARMEVWSEVLCALRASGSVAKTLLVLTISTKSCELGSLDCLEQMIVHERTITRWIPQQC 273
Query: 232 RE 233
E
Sbjct: 274 SE 275
>gi|413935040|gb|AFW69591.1| hypothetical protein ZEAMMB73_126444 [Zea mays]
Length = 352
Score = 216 bits (551), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 114/242 (47%), Positives = 151/242 (62%), Gaps = 12/242 (4%)
Query: 2 GPRWK------GRASEAKSSGRSHVQNHLRFTFLSIQSEAHAVLAGYS--ALLAVEAEQT 53
GPRWK G A+ A ++ S + L+ + SEA A+LA ++ A+L V Q
Sbjct: 53 GPRWKKGKDCKGFAALAAANPMSSIVAELQASLRD--SEAVAILAAHARDAILEVGPRQA 110
Query: 54 ELLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKA 113
LLN A FGR + A + QW+QLG EE F+LCH+LKCL++ + + ELW + +
Sbjct: 111 ALLNGAAFGRAVEGAGAESQWFQLGPEEVFFLCHALKCLRVESNNKTRIGAPELWGLLAS 170
Query: 114 KKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGE--DGE 171
E FP +Y+AY +LR KNWVVRSG QYG DFVAYRHHP+LVHSE+ V+V EG+
Sbjct: 171 GSEQFPEMYRAYQYLRLKNWVVRSGLQYGADFVAYRHHPALVHSEFTVVVAPEGKAFGTR 230
Query: 172 NGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGTATPSCLEQYAVEERTISRWSPEQC 231
R+ VWS++ C +R G VAKTLL+LTI+ + CLEQ V ERTI+RW P+QC
Sbjct: 231 CARMEVWSEVLCALRASGSVAKTLLVLTISTKSCELGSLDCLEQMIVHERTITRWIPQQC 290
Query: 232 RE 233
E
Sbjct: 291 SE 292
>gi|222635688|gb|EEE65820.1| hypothetical protein OsJ_21558 [Oryza sativa Japonica Group]
Length = 415
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/241 (44%), Positives = 147/241 (60%), Gaps = 21/241 (8%)
Query: 2 GPRWK----GR--ASEAKSSGRSHVQNHLRFTFLSIQSEAHAVLAGYSALLAVEAEQTEL 55
GPRWK G+ AS A ++ S + + L+ +F+S + A G SA+L V EQ +
Sbjct: 139 GPRWKKGKDGKDFASLAAANPMSAIVSELKASFISSKPVAILSGPGGSAVLGVGPEQAVI 198
Query: 56 LNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKK 115
LNRA FG I A K W+QL EE FYLCH+L C+++ DN ++ ELW Y ++
Sbjct: 199 LNRAAFGHAIENATAQKHWFQLSPEEVFYLCHALNCIRVDSLDNKQMSEIELWDYFRSGS 258
Query: 116 ETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGEN--G 173
E+FP +YKAY+HLR KNWV + P+LV+SE+A++V+ EG + N G
Sbjct: 259 ESFPEMYKAYAHLRLKNWVPNG------------NIPALVNSEFALVVVPEGAEFGNRCG 306
Query: 174 RLRVWSDIHCTVRLCGGVAKTLLILTI-NKNGQGTATPSCLEQYAVEERTISRWSPEQCR 232
RL VWSD+ C +R G VAKTLL+LTI + + ++P CLEQ V ERTI+RW +QCR
Sbjct: 307 RLEVWSDLLCALRASGSVAKTLLVLTISSSSKCELSSPDCLEQLVVHERTITRWILQQCR 366
Query: 233 E 233
E
Sbjct: 367 E 367
>gi|168019588|ref|XP_001762326.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686404|gb|EDQ72793.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 248
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/240 (41%), Positives = 150/240 (62%), Gaps = 14/240 (5%)
Query: 1 MGPRWKGR--ASEAKSSGRSHVQNHLRFTFLSIQSEAHAVLAGYSALLAVEAEQTELLNR 58
+G RWK R A+ A S + LR + S++ +L S +L+++ + ++LNR
Sbjct: 3 LGVRWKSREAAAVALEEPISSLYKELR-EWKSVE----GLLVHSSVILSIDFAKAQILNR 57
Query: 59 ACFGRHI-VTAE-KDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKE 116
ACFG+ I + AE +D + +QLG+EE F+L L+C+ +V + + +E+W+ M+A K
Sbjct: 58 ACFGKPIYLNAELEDVRMFQLGLEEAFFLTSELECISLVLQGRVVLSKEEVWRCMQASKP 117
Query: 117 TFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLR 176
F LY AY+HLR K WVVRSG QYG DF+AYRHHP+LVHS+YAV+V+ EG + R++
Sbjct: 118 EFGQLYIAYAHLRAKQWVVRSGIQYGADFMAYRHHPALVHSDYAVIVMVEGHE---ERMK 174
Query: 177 VWSDIHCTVRLCGGVAKTLLILTI--NKNGQGTATPSCLEQYAVEERTISRWSPEQCRED 234
W+++ RLCG VAKTLL++ + G ++P C + VE + RW PE+ RE+
Sbjct: 175 TWTEMQAMNRLCGSVAKTLLLIHFIPKREGIDLSSPLCQGDFVVEAVEVRRWLPEKSREE 234
>gi|388497594|gb|AFK36863.1| unknown [Medicago truncatula]
Length = 108
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/106 (69%), Positives = 82/106 (77%), Gaps = 2/106 (1%)
Query: 74 WYQLGMEEGFYLCHSLKCLKIV-GEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
W+QL +EE FYL +SLKCLKI G D ND+ELW K+KKETFP YKAYSHLR KN
Sbjct: 3 WFQLTVEEAFYLSYSLKCLKINDGADTGPLNDEELWCCFKSKKETFPYFYKAYSHLRMKN 62
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGE-NGRLRV 177
WVVRS SQYGVDF+ YRHHP+ VHSEY VLVL+ DGE NGRLRV
Sbjct: 63 WVVRSRSQYGVDFIVYRHHPAWVHSEYGVLVLSHDNDGELNGRLRV 108
>gi|326524754|dbj|BAK04313.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 187
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 103/170 (60%), Gaps = 8/170 (4%)
Query: 3 PRWK----GR--ASEAKSSGRSHVQNHLRFTFLSIQSEAHAVLAGYSALLAVEAEQTELL 56
PRWK G+ A+ A S S + L+ + + A A+L V +Q LL
Sbjct: 7 PRWKKGKDGKDLAALAASQPMSAIVAKLQASLKGSKLAATLSSGAGDAILGVNPQQAALL 66
Query: 57 NRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIV--GEDNSTKNDDELWQYMKAK 114
+RA FGR + A + W+QLG EE FYL H+L C+ +V ++ + ELW + +
Sbjct: 67 SRAAFGRALENAGAGRHWFQLGAEELFYLLHALNCIAVVESASKDNPMSQGELWDRLCSA 126
Query: 115 KETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVL 164
E+FP Y+AYSHLR KNWVVRSG QYG DFVAYRHHP+LVHSE+AV+V+
Sbjct: 127 SESFPETYRAYSHLRSKNWVVRSGLQYGADFVAYRHHPALVHSEFAVVVV 176
>gi|413943062|gb|AFW75711.1| hypothetical protein ZEAMMB73_205893 [Zea mays]
Length = 174
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/114 (52%), Positives = 78/114 (68%), Gaps = 2/114 (1%)
Query: 121 LYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGE--DGENGRLRVW 178
+YKAY HLR KNWVV+SG QYG DFV YRH P+LVHSE+AV+V ++G+ G +++W
Sbjct: 1 MYKAYEHLRLKNWVVKSGLQYGADFVTYRHQPTLVHSEFAVIVASKGKAFSTRCGCMKLW 60
Query: 179 SDIHCTVRLCGGVAKTLLILTINKNGQGTATPSCLEQYAVEERTISRWSPEQCR 232
S++ C +R VAKTLL LTI+ + CLE V ER I+RW P+QCR
Sbjct: 61 SELLCALRASESVAKTLLFLTISTKCCELGSLDCLEHMVVHEREITRWLPQQCR 114
>gi|218186016|gb|EEC68443.1| hypothetical protein OsI_36652 [Oryza sativa Indica Group]
Length = 253
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 104/184 (56%), Gaps = 14/184 (7%)
Query: 2 GPRWK----GR--ASEAKSSGRSHVQNHLRFTFLSIQSEAHAVLAGYS--ALLAVEAEQT 53
GPRWK G+ ++ A ++ S + L+ +F+S S+ AVL+G A+L VE EQ
Sbjct: 5 GPRWKKGKDGKDFSALAAANPMSVIVAELKASFIS--SKPVAVLSGPGGGAILGVEPEQA 62
Query: 54 ELLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKA 113
+LNRA FG + A K W+QL EE FYLCH L C+++ D +D +LW + ++
Sbjct: 63 VILNRAAFGHAVEIAAAQKHWFQLSPEEVFYLCHVLNCIRVESHDKKQMSDKQLWNHFRS 122
Query: 114 KKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENG 173
E+FP +YKAYSHLR KNWVVRSG QY + + P V E V+ L +G G
Sbjct: 123 MSESFPEMYKAYSHLRFKNWVVRSGLQYD----SKQLKPPKVLIESKVIELERRYEGTEG 178
Query: 174 RLRV 177
R
Sbjct: 179 FKRT 182
>gi|241671159|ref|XP_002400009.1| tRNA-splicing endonuclease subunit Sen2, putative [Ixodes
scapularis]
gi|215506247|gb|EEC15741.1| tRNA-splicing endonuclease subunit Sen2, putative [Ixodes
scapularis]
Length = 540
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 94/167 (56%), Gaps = 8/167 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL EE ++L + L CL IV E+N + +LWQ + A TFP Y AY H R K
Sbjct: 371 EYLQLFFEEAYFLSYGLGCL-IVQENNEELDLLKLWQRLCALCPTFPARYAAYHHFRSKG 429
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLA----EGEDGENGRLRVWSDIHCTVRLC 188
WVVR+GS+Y D++ Y+ P+ H+ ++VLV E+ E+ RLR W+ + +RL
Sbjct: 430 WVVRTGSRYAADYLLYKDGPAFYHATFSVLVRQAWSETLEEAEDRRLRSWTSLAGLIRLS 489
Query: 189 GGVAKTLLI--LTINKNGQGTATPSCLEQYAVEERTISRWSPEQCRE 233
AK +L+ + I K+ +TP CL + ++E + RW + RE
Sbjct: 490 ASAAKAVLLCYVVIPKDAD-LSTPECLRSFKIQELLLRRWITSEERE 535
>gi|328713814|ref|XP_003245183.1| PREDICTED: hypothetical protein LOC100568704 [Acyrthosiphon pisum]
Length = 318
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 83/161 (51%), Gaps = 2/161 (1%)
Query: 75 YQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWV 134
Y L +EE F+LC++L+CL+I ED+S + E W+ K+ FP Y AY + R K WV
Sbjct: 160 YFLLLEEAFFLCYTLECLEIRSEDSSLISIVECWKQFNGLKKKFPYFYAAYHYYRSKGWV 219
Query: 135 VRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKT 194
V+ G QYG D+V Y+ P HS Y V++ G++ E L W + R +K
Sbjct: 220 VKPGQQYGGDYVLYKSSPIYYHSSYVVVISVNGQNSE--LLPSWPSWYGCGRAIEAASKE 277
Query: 195 LLILTINKNGQGTATPSCLEQYAVEERTISRWSPEQCREDP 235
LLI T+ L QY + + + RW P Q R+ P
Sbjct: 278 LLICTVLGPAYEEGMLIDLSQYTINDTIVRRWVPSQNRKKP 318
>gi|357485405|ref|XP_003612990.1| tRNA-splicing endonuclease subunit Sen2-2 [Medicago truncatula]
gi|355514325|gb|AES95948.1| tRNA-splicing endonuclease subunit Sen2-2 [Medicago truncatula]
Length = 157
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 75/143 (52%), Gaps = 38/143 (26%)
Query: 93 KIVGE-DNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHH 151
KI G+ D ND+ELW Y K+KK+ FP YK YGVD + +R+H
Sbjct: 48 KINGDADTGPLNDEELWCYFKSKKDAFPCFYK-----------------YGVDLIVHRNH 90
Query: 152 PSLVHSEYAVLVLA-EGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGTATP 210
P+ VHSEY V VL+ E +D N RLRVWSDI NKN +
Sbjct: 91 PARVHSEYCVFVLSHEIDDYLNERLRVWSDI-------------------NKNVHSDESL 131
Query: 211 SCLEQYAVEERTISRWSPEQCRE 233
C Y VEERTISRWSPEQCRE
Sbjct: 132 LCFTNYTVEERTISRWSPEQCRE 154
>gi|384248614|gb|EIE22098.1| hypothetical protein COCSUDRAFT_83489, partial [Coccomyxa
subellipsoidea C-169]
Length = 192
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 93/188 (49%), Gaps = 14/188 (7%)
Query: 46 LAVEAEQTELLNRACFGRHIVTAEKDKQ-WYQLGMEEGFYLCHSLKCLKIVGEDNSTKND 104
L V+A ++LL+ ACFG A + K L +EE F+L ++LK L + +
Sbjct: 10 LEVDAAVSDLLDSACFGEKSSYAGRKKSGQIILSLEEAFFLVYALKALTV------SPTP 63
Query: 105 DELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVL 164
+LW+ K F Y + H R K WVVR G+QYGVD+V Y HP+ HS Y +L L
Sbjct: 64 TDLWRTCVGLKPDFKFSYIPFHHFRSKGWVVRPGAQYGVDYVLYSKHPAEAHSSYCLLSL 123
Query: 165 AEGEDGENGRLRVWSDIHCTVR---LCGGVAKTLLILTINKNGQGTAT-PSCLEQYAVEE 220
++ L W+D+ R + + LL+L + + P+CL VEE
Sbjct: 124 M---GTKHPSLLSWNDVEAANRNSSQASSLRQPLLLLYVEEQPTTDQDFPACLSSVTVEE 180
Query: 221 RTISRWSP 228
R + RW+P
Sbjct: 181 RLVERWTP 188
>gi|440794731|gb|ELR15886.1| tRNA intron endonuclease, catalytic Cterminal subfamily protein
[Acanthamoeba castellanii str. Neff]
Length = 489
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 91/182 (50%), Gaps = 18/182 (9%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKND-----------DELWQYMKAKKETF 118
++ ++ QLG+EE FYL L+CLK++ D + DE W A + F
Sbjct: 308 ENGEFLQLGLEETFYLIAELRCLKVIRIDRAQPPQPSAQAWRFMGVDECWSAFCAAQGGF 367
Query: 119 PLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGED------GEN 172
Y AY H R+ NWVV+SG +YG DFV YR P+ H+E++V+V A GE
Sbjct: 368 AYTYAAYRHYRQHNWVVKSGIKYGTDFVLYRRGPAHYHAEWSVVVQASGEGVVCGQWSAG 427
Query: 173 GRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGTATP-SCLEQYAVEERTISRWSPEQC 231
GR W ++ RL VAK LL+ ++ G+G++ + + V + RW P
Sbjct: 428 GRQLSWRNLATLNRLSEQVAKGLLLCSVEPAGEGSSQGWATSAGWPVHQAVYRRWVPAVS 487
Query: 232 RE 233
RE
Sbjct: 488 RE 489
>gi|218192115|gb|EEC74542.1| hypothetical protein OsI_10066 [Oryza sativa Indica Group]
Length = 160
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 76/134 (56%), Gaps = 6/134 (4%)
Query: 2 GPRWK-GRASE-----AKSSGRSHVQNHLRFTFLSIQSEAHAVLAGYSALLAVEAEQTEL 55
GPRWK G+ + A ++ S + L +F+S + A G A+L VE +Q +
Sbjct: 5 GPRWKKGKDGKDFLALAAANPMSVIVAELNASFISSKPVAILSGPGGGAILGVEPKQAVI 64
Query: 56 LNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKK 115
LNRA FG + A K W+QL EE FYLCH L C+++ D +D +LW + ++
Sbjct: 65 LNRAAFGHAVEIAAAQKHWFQLSPEEVFYLCHVLNCIRVESRDKKQMSDKQLWNHFRSMS 124
Query: 116 ETFPLLYKAYSHLR 129
E+FP +YKAYSHLR
Sbjct: 125 ESFPEMYKAYSHLR 138
>gi|39841065|ref|NP_950198.1| tRNA-splicing endonuclease subunit Sen2 [Mus musculus]
gi|50428912|sp|Q6P7W5.1|SEN2_MOUSE RecName: Full=tRNA-splicing endonuclease subunit Sen2; AltName:
Full=tRNA-intron endonuclease Sen2
gi|38494187|gb|AAH61473.1| TRNA splicing endonuclease 2 homolog (S. cerevisiae) [Mus musculus]
gi|74145207|dbj|BAE22246.1| unnamed protein product [Mus musculus]
Length = 460
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 86/168 (51%), Gaps = 7/168 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I E +LWQ A + TF Y AY + R K
Sbjct: 290 EYLQLSLEEAFFLAYALGCLSIYYEKEPL-TIVKLWQAFTAVQPTFRTTYMAYHYFRSKG 348
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGG 190
WV + G +YG D + YR P H+ Y+V++ L + +G R W + R+ G
Sbjct: 349 WVPKVGLKYGTDLLLYRKGPPFYHASYSVIIELLDDNYEGSLRRPFSWKSLAALSRVSGN 408
Query: 191 VAKTLLILTINKNGQGTA----TPSCLEQYAVEERTISRWSPEQCRED 234
V+K L++ + K TA TP C+++ V+E +SRW + R D
Sbjct: 409 VSKELMLCYLIKPSTMTAEDMETPECMKRIQVQEVILSRWVSSRERSD 456
>gi|148667113|gb|EDK99529.1| tRNA splicing endonuclease 2 homolog (SEN2, S. cerevisiae), isoform
CRA_c [Mus musculus]
Length = 461
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 86/168 (51%), Gaps = 7/168 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I E +LWQ A + TF Y AY + R K
Sbjct: 291 EYLQLSLEEAFFLAYALGCLSIYYEKEPL-TIVKLWQAFTAVQPTFRTTYMAYHYFRSKG 349
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGG 190
WV + G +YG D + YR P H+ Y+V++ L + +G R W + R+ G
Sbjct: 350 WVPKVGLKYGTDLLLYRKGPPFYHASYSVIIELLDDNYEGSLRRPFSWKSLAALSRVSGN 409
Query: 191 VAKTLLILTINKNGQGTA----TPSCLEQYAVEERTISRWSPEQCRED 234
V+K L++ + K TA TP C+++ V+E +SRW + R D
Sbjct: 410 VSKELMLCYLIKPSTMTAEDMETPECMKRIQVQEVILSRWVSSRERSD 457
>gi|108706248|gb|ABF94043.1| tRNA-splicing endonuclease, putative [Oryza sativa Japonica Group]
gi|125584963|gb|EAZ25627.1| hypothetical protein OsJ_09455 [Oryza sativa Japonica Group]
Length = 180
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 75/134 (55%), Gaps = 6/134 (4%)
Query: 2 GPRWK-GRASE-----AKSSGRSHVQNHLRFTFLSIQSEAHAVLAGYSALLAVEAEQTEL 55
GPRWK G+ + A ++ S + L +F+S + A G A+L VE +Q +
Sbjct: 5 GPRWKKGKDGKDFLALAAANPMSVIVAELNASFISSKPVAILSGPGGGAILGVEPKQAVI 64
Query: 56 LNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKK 115
LNRA FG + A K W+QL EE FYLCH L C+++ D ++ +LW + ++
Sbjct: 65 LNRAAFGHAVEIAAAQKHWFQLSPEEVFYLCHVLNCIRVESRDKKQMSEKQLWNHFRSMS 124
Query: 116 ETFPLLYKAYSHLR 129
E+FP +YKAYSH R
Sbjct: 125 ESFPEMYKAYSHPR 138
>gi|354490488|ref|XP_003507389.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-like [Cricetulus
griseus]
gi|344256516|gb|EGW12620.1| tRNA-splicing endonuclease subunit Sen2 [Cricetulus griseus]
Length = 459
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 7/168 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I E +LWQ A + TF Y AY + R K
Sbjct: 289 EYLQLSLEEAFFLTYALGCLSIYYEKEPL-TIAKLWQAFTAVQPTFRTTYMAYHYFRSKG 347
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGG 190
WV + G +YG D + YR P H+ Y+V+V + + +G R W + R+ G
Sbjct: 348 WVPKVGLKYGTDLLLYRKGPPFYHASYSVIVELVDDNFEGSLRRPFSWKSLAALSRVSGN 407
Query: 191 VAKTLLILTINKNGQGTA----TPSCLEQYAVEERTISRWSPEQCRED 234
V+K L++ + K T+ TP C+++ V+E +SRW + R D
Sbjct: 408 VSKELMLCYLIKPSTMTSEDMETPECMKRIQVQEVILSRWVSSRERSD 455
>gi|351696034|gb|EHA98952.1| tRNA-splicing endonuclease subunit Sen2 [Heterocephalus glaber]
Length = 445
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 84/168 (50%), Gaps = 7/168 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL + E +LWQ A + TF Y AY + R K
Sbjct: 275 EYLQLSLEEAFFLVYALGCLSVYYEKEPL-TIVKLWQAFTAIQPTFRTTYGAYHYFRSKG 333
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGG 190
WV ++G +YG D + YR P H+ Y+V+V + E G R W + R+ G
Sbjct: 334 WVPKTGLKYGTDLLLYRKGPPFYHASYSVIVELVDERFTGPLRRPFTWKSLATLSRVSGN 393
Query: 191 VAKTLLILTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
V+K L++ + K T +P CL + V+E +SRW + R D
Sbjct: 394 VSKELMLCYLIKPSTMTDEDMKSPECLRRIKVQEVILSRWVSSRERSD 441
>gi|62078847|ref|NP_001014079.1| tRNA-splicing endonuclease subunit Sen2 [Rattus norvegicus]
gi|81883151|sp|Q5M954.1|SEN2_RAT RecName: Full=tRNA-splicing endonuclease subunit Sen2; AltName:
Full=tRNA-intron endonuclease Sen2
gi|56585031|gb|AAH87631.1| TRNA splicing endonuclease 2 homolog (S. cerevisiae) [Rattus
norvegicus]
Length = 463
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 7/168 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I E +LWQ A + TF Y AY + R K
Sbjct: 293 EYLQLSLEEAFFLAYALGCLSIYYEKEPL-TIVKLWQAFTAVQPTFRTTYMAYHYFRSKG 351
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGG 190
WV + G +YG D + YR P H+ Y+V++ + + +G R W + R+ G
Sbjct: 352 WVPKVGLKYGTDLLLYRKGPPFYHASYSVIIELVDDNFEGSLRRPFSWKSLAALSRVSGN 411
Query: 191 VAKTLLILTINK----NGQGTATPSCLEQYAVEERTISRWSPEQCRED 234
V+K L++ + K + TP C+ + V+E +SRW + R D
Sbjct: 412 VSKELMLCYLIKPSTMTNEDMETPECMRRIQVQEVILSRWVSSRERSD 459
>gi|348553939|ref|XP_003462783.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-like [Cavia
porcellus]
Length = 448
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 81/160 (50%), Gaps = 7/160 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I + +LWQ A + TF Y AY + R K
Sbjct: 278 EYLQLSLEEAFFLVYALGCLSIYYKKEPL-TIRKLWQVFTAIRPTFRTTYGAYHYFRSKG 336
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGG 190
WV ++G +YG D + YR P H+ Y+V+V + E G R W + R+ G
Sbjct: 337 WVPKAGLKYGTDLLLYRKGPPFYHASYSVIVELVDERFTGPLRRPFTWKSLATLSRVSGN 396
Query: 191 VAKTLLILTINKNGQGT----ATPSCLEQYAVEERTISRW 226
V+K L++ + K T +P CL + V+E +SRW
Sbjct: 397 VSKELMLCYLIKPSTMTDEDMESPECLRRIKVQEVILSRW 436
>gi|432859167|ref|XP_004069046.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-like [Oryzias
latipes]
Length = 401
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 89/172 (51%), Gaps = 11/172 (6%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L +SL CL + D ++ +LW+ ++ + F Y AY H R +
Sbjct: 229 EYLQLSLEEAFFLVYSLGCLSVYL-DQEPQSVIQLWRRFRSLRPDFTSSYAAYHHFRSRG 287
Query: 133 WVVR--SGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRV--WSDIHCTVRLC 188
WV + SG++YGVDF+ YR P H+ Y+V+V ++ LR W R+
Sbjct: 288 WVPKGGSGAKYGVDFMLYRKGPPFYHASYSVVVEQTDDEFRGSTLRPFSWRSFAALSRIT 347
Query: 189 GGVAKTLLILTINKNG----QGTATPSCLEQYAVEERTISRW--SPEQCRED 234
V+K L++ I G + +P CL + V+E ISRW S E+ +D
Sbjct: 348 ASVSKELMLCYIVYPGELLKEELDSPVCLSKLKVQEVIISRWVSSKERAEQD 399
>gi|449666676|ref|XP_002160232.2| PREDICTED: tRNA-splicing endonuclease subunit Sen2-like [Hydra
magnipapillata]
Length = 382
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 82/169 (48%), Gaps = 8/169 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L +L CL + E + ++W A K F +Y AY + R K
Sbjct: 211 EYLQLTLEEAFFLSFALGCLSVENESKEAMSITKMWNTYSAVKADFIQMYIAYHYFRSKG 270
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGR----LRVWSDIHCTVRLC 188
WVVR+ + YG DF+ Y+ H+ Y+V V E+ N W D+ R+
Sbjct: 271 WVVRTTNIYGTDFLLYKDGMPFYHASYSVCVRLVDEENLNMIDGMGASSWKDLSSISRVN 330
Query: 189 GGVAKTLLILTINKNG----QGTATPSCLEQYAVEERTISRWSPEQCRE 233
VAK +L + K + A PSC++ + V E + RW PE+ RE
Sbjct: 331 ERVAKDVLFCYVVKPKEMKVEQLAVPSCIKHFKVIETVLRRWIPEKYRE 379
>gi|79314295|ref|NP_001030813.1| tRNA-intron endonuclease [Arabidopsis thaliana]
gi|98962053|gb|ABF59356.1| unknown protein [Arabidopsis thaliana]
gi|332644524|gb|AEE78045.1| tRNA-intron endonuclease [Arabidopsis thaliana]
Length = 118
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 57/83 (68%)
Query: 50 AEQTELLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQ 109
+EQ ELL+R CFGR + AEKDK+W QL EE F+L + LKC+KI S N +LW+
Sbjct: 36 SEQAELLDRYCFGRLVFGAEKDKRWIQLSYEEAFFLFYKLKCIKISLHGRSLVNGVDLWR 95
Query: 110 YMKAKKETFPLLYKAYSHLRKKN 132
+++ K F +LYKAYSHLR KN
Sbjct: 96 SIRSFKPNFTILYKAYSHLRSKN 118
>gi|347832658|emb|CCD48355.1| hypothetical protein [Botryotinia fuckeliana]
Length = 680
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 93/198 (46%), Gaps = 36/198 (18%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTK----NDDELWQYMKAK----------- 114
+D++ +QL MEE F+L + L L ++ D TK N D + K+
Sbjct: 485 EDQEHFQLTMEEAFFLSYGLGALTVL--DPVTKQALSNQDLFSLFRKSSYFPPTSNPSLS 542
Query: 115 -KETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDG--- 170
+ F + Y Y H R WVVR G+++ VD++ Y P H+E+AVL+L D
Sbjct: 543 TDDPFLVNYVVYHHFRSLGWVVRGGTKFSVDYLLYNRGPVFSHAEFAVLILPSYSDPYWS 602
Query: 171 ---------ENGRLRVWSDIHCTVRLCGGVAKTLLIL------TINKNGQGTATPSCLEQ 215
+ + R WS +HC R+ V KTL+++ I+ N + + LE+
Sbjct: 603 SGPFLQNYVKGKQERSWSWMHCINRVITQVKKTLILVYVDIPAPIDGNMKENSVDKLLEK 662
Query: 216 YAVEERTISRWSPEQCRE 233
Y V E + RWSP + R+
Sbjct: 663 YKVREVVLKRWSPNRSRD 680
>gi|334335557|ref|XP_001365981.2| PREDICTED: tRNA-splicing endonuclease subunit Sen2-like
[Monodelphis domestica]
Length = 466
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 84/168 (50%), Gaps = 7/168 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I E+ +LW+ + TF Y AY + R K
Sbjct: 296 EYLQLSLEEAFFLVYALGCLNIYYEEEPL-TILKLWEAFHLVQPTFRTTYMAYHYFRSKG 354
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGG 190
WV + G +YG DF+ YR PS H+ Y+V++ + E +G R W + R+
Sbjct: 355 WVPKVGLKYGTDFLLYRKGPSFYHASYSVIIELVNESFEGSLRRPFSWKSLAGLNRITAN 414
Query: 191 VAKTL----LILTINKNGQGTATPSCLEQYAVEERTISRWSPEQCRED 234
V+K L LI N +P CL++ V+E ++RW + R D
Sbjct: 415 VSKELMLCYLIRPSNMTDNEMESPECLKRIKVQEVILNRWVSSRERSD 462
>gi|154313133|ref|XP_001555893.1| hypothetical protein BC1G_05568 [Botryotinia fuckeliana B05.10]
Length = 680
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 93/198 (46%), Gaps = 36/198 (18%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTK----NDDELWQYMKAK----------- 114
+D++ +QL MEE F+L + L L ++ D TK N D + K+
Sbjct: 485 EDQEHFQLTMEEAFFLSYGLGALTVL--DPVTKQALSNQDLFSLFRKSSYFPPTSNPSLS 542
Query: 115 -KETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDG--- 170
+ F + Y Y H R WVVR G+++ VD++ Y P H+E+AVL+L D
Sbjct: 543 TDDPFLVNYVVYHHFRSLGWVVRGGTKFSVDYLLYNRGPVFSHAEFAVLILPSYSDPYWS 602
Query: 171 ---------ENGRLRVWSDIHCTVRLCGGVAKTLLIL------TINKNGQGTATPSCLEQ 215
+ + R WS +HC R+ V KTL+++ I+ N + + LE+
Sbjct: 603 SGPFLQNYVKGKQERSWSWMHCINRVITQVKKTLILVYVDIPAPIDGNMKENSVDKLLEK 662
Query: 216 YAVEERTISRWSPEQCRE 233
Y V E + RWSP + R+
Sbjct: 663 YKVREVVLKRWSPNRSRD 680
>gi|157423033|gb|AAI53527.1| Zgc:154067 protein [Danio rerio]
Length = 438
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIV--GEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRK 130
++ QL EE F+L ++L CL I GE S +LW ++ + F Y AY + R
Sbjct: 268 EYLQLSYEEAFFLVYALGCLSIYYNGEPLSVA---QLWTMFRSLQPNFCFSYAAYHYYRS 324
Query: 131 KNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRV--WSDIHCTVRLC 188
K WV +SG +YG D + YR P H+ Y+V+V LR W + R
Sbjct: 325 KGWVPKSGVKYGTDLMLYRKGPPFYHASYSVVVDTVDASFRRSSLRPFSWRSLATLSRTT 384
Query: 189 GGVAKTLLILTI----NKNGQGTATPSCLEQYAVEERTISRW 226
G V+K L++ I + G +P CL++++V+E +SRW
Sbjct: 385 GNVSKELMLCFIITPSDVTGDLLVSPQCLKRFSVQEVLMSRW 426
>gi|115495149|ref|NP_001070119.1| tRNA-splicing endonuclease subunit Sen2 [Danio rerio]
gi|115313421|gb|AAI24531.1| Zgc:154067 [Danio rerio]
Length = 438
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIV--GEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRK 130
++ QL EE F+L ++L CL I GE S +LW ++ + F Y AY + R
Sbjct: 268 EYLQLSYEEAFFLVYALGCLSIYYNGEALSVA---QLWTMFRSLQPNFCFSYAAYHYYRS 324
Query: 131 KNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRV--WSDIHCTVRLC 188
K WV +SG +YG D + YR P H+ Y+V+V LR W + R
Sbjct: 325 KGWVPKSGVKYGTDLMLYRKGPPFYHASYSVVVDTVDASFRRSSLRPFSWRSLATLSRTT 384
Query: 189 GGVAKTLLILTI----NKNGQGTATPSCLEQYAVEERTISRW 226
G V+K L++ I + G +P CL++++V+E +SRW
Sbjct: 385 GNVSKELMLCFIITPSDVTGDLLVSPQCLKRFSVQEVLMSRW 426
>gi|148878115|gb|AAI46216.1| TRNA splicing endonuclease 2 homolog (S. cerevisiae) [Bos taurus]
gi|296474661|tpg|DAA16776.1| TPA: tRNA-splicing endonuclease subunit Sen2 [Bos taurus]
Length = 459
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 81/168 (48%), Gaps = 7/168 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I E +LW + TF Y AY H R K
Sbjct: 289 EYLQLSLEEAFFLVYALGCLSIYYEKEPL-TIMKLWNAFSTVQPTFRTTYMAYHHFRSKG 347
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGG 190
WV + G +YG D + YR P H+ Y+V+V + + G R W + R+
Sbjct: 348 WVPKPGLKYGTDLLLYRKGPPFYHASYSVIVELVDDRFQGAPRRPLSWRSLAALSRVSVS 407
Query: 191 VAKTLLILTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
V+K L++ + K T +P C++Q V+E +SRW + R D
Sbjct: 408 VSKELMLCYLIKPSTMTDKDMESPECMKQIKVQEVILSRWVSSRERSD 455
>gi|109715823|ref|NP_001035942.1| tRNA-splicing endonuclease subunit Sen2 [Bos taurus]
gi|82546901|gb|ABB82240.1| tRNA spicing endonuclease 2-like protein [Bos taurus]
Length = 459
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 81/168 (48%), Gaps = 7/168 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I E +LW + TF Y AY H R K
Sbjct: 289 EYLQLSLEEAFFLVYALGCLSIYYEKEPL-TIMKLWNAFSTVQPTFRTTYMAYHHFRSKG 347
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGG 190
WV + G +YG D + YR P H+ Y+V+V + + G R W + R+
Sbjct: 348 WVPKPGLKYGTDLLLYRKGPPFYHASYSVIVELVDDRFQGAPRRPLSWRSLAALSRVSVS 407
Query: 191 VAKTLLILTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
V+K L++ + K T +P C++Q V+E +SRW + R D
Sbjct: 408 VSKELMLCYLIKPSTMTDKDMESPECMKQIKVQEVILSRWVSSRERSD 455
>gi|426249715|ref|XP_004018595.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2 [Ovis aries]
Length = 462
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 81/168 (48%), Gaps = 7/168 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I E +LW + TF Y AY H R K
Sbjct: 292 EYLQLSLEEAFFLVYALGCLSIYYEKEPL-TIMKLWNAFTTVQPTFRTTYMAYHHFRSKG 350
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGG 190
WV + G +YG D + YR P H+ Y+V+V + + G R W + R+
Sbjct: 351 WVPKPGLKYGTDLLLYRKGPPFYHASYSVIVELVDDRFQGAPRRPLSWRSLAALSRVSVS 410
Query: 191 VAKTLLILTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
V+K L++ + K T +P C++Q V+E +SRW + R D
Sbjct: 411 VSKELMLCYLIKPSAMTDKDMESPECMKQIKVQEVILSRWVSSRERSD 458
>gi|440900004|gb|ELR51235.1| tRNA-splicing endonuclease subunit Sen2 [Bos grunniens mutus]
Length = 461
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 81/168 (48%), Gaps = 7/168 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I E +LW + TF Y AY H R K
Sbjct: 291 EYLQLSLEEAFFLVYALGCLSIYYEKEPL-TIMKLWNAFSTVQPTFRTTYMAYHHFRSKG 349
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGG 190
WV + G +YG D + YR P H+ Y+V+V + + G R W + R+
Sbjct: 350 WVPKPGLKYGTDLLLYRKGPPFYHASYSVVVELVDDRFQGAPRRPLSWRSLAALSRVSVS 409
Query: 191 VAKTLLILTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
V+K L++ + K T +P C++Q V+E +SRW + R D
Sbjct: 410 VSKELMLCYLIKPSTMTDKDMESPECMKQIKVQEVILSRWVSSRERSD 457
>gi|355726516|gb|AES08897.1| tRNA splicing endonuclease 2-like protein [Mustela putorius furo]
Length = 253
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 7/168 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I E +LW+ A + TF Y AY + R K
Sbjct: 83 EYLQLSLEEAFFLVYALGCLSIYYEKEPL-TILKLWKAFTAVQPTFRTTYMAYHYFRSKG 141
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGG 190
WV + G +YG D + YR P H+ Y+V++ + + +G R W + R+
Sbjct: 142 WVPKVGLKYGTDLLLYRKGPPFYHASYSVIIELVDDNFEGSLRRPFSWRSLAALSRVSVN 201
Query: 191 VAKTLLILTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
V+K L++ + K T +P C++Q V+E +SRW + R D
Sbjct: 202 VSKELMLCYLIKPSTMTNKEMESPECMKQIKVQEVILSRWVSSRERSD 249
>gi|395516636|ref|XP_003762493.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2 [Sarcophilus
harrisii]
Length = 416
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 83/168 (49%), Gaps = 7/168 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL + E+ +LW + TF Y AY + R K
Sbjct: 246 EYLQLSLEEAFFLVYALGCLNVYYEEEPL-TILKLWDAFHLVQPTFRTTYMAYHYFRSKG 304
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGG 190
WV + G +YG DF+ YR P H+ Y+V++ + + +G R W + R+
Sbjct: 305 WVPKVGLKYGTDFLLYRKGPPFYHASYSVIIELVNDSFEGSLRRPFSWKSLAGLNRITAN 364
Query: 191 VAKTL----LILTINKNGQGTATPSCLEQYAVEERTISRWSPEQCRED 234
V+K L LI N + +P CL++ V+E +SRW + R D
Sbjct: 365 VSKELMLCYLIRPSNMTDKEMESPECLKRIKVQEVILSRWVSSRERSD 412
>gi|291233654|ref|XP_002736770.1| PREDICTED: tRNA splicing endonuclease 2 homolog (SEN2, S.
cerevisiae)-like [Saccoglossus kowalevskii]
Length = 597
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 84/171 (49%), Gaps = 9/171 (5%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L + L CL ++ +D ++ N ++W A F Y Y ++R K
Sbjct: 419 EYLQLSLEEAFFLSYGLGCLTVLDKDKNSLNLSDMWLRYCAINPRFISSYAVYHYIRSKG 478
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDG-----ENGRLRVWSDIHCTVRL 187
WV ++G ++G D++ Y+ P HS Y+VL+ ED + R W I R+
Sbjct: 479 WVPKTGIKFGSDYIVYKQGPPFYHSTYSVLISMVDEDTLLSCEDEQRPLTWPVICGMSRV 538
Query: 188 CGGVAKTLLILTINKNGQGTA----TPSCLEQYAVEERTISRWSPEQCRED 234
AK ++ + K TA +P CLE+ V+E + RW + R D
Sbjct: 539 TEHAAKEIMFCHVIKPSDMTAEEMKSPRCLERLKVQETVMRRWVSAKERMD 589
>gi|395847239|ref|XP_003796288.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2 isoform 1
[Otolemur garnettii]
Length = 466
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 7/168 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I E +LW+ + TF Y AY + R K
Sbjct: 296 EYLQLSLEEAFFLVYALGCLSIYHEKEPL-TILKLWKTFTVVQPTFRTTYMAYHYFRSKG 354
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGG 190
WV + G +YG D + YR P H+ Y+V++ +++ +G R W + R+
Sbjct: 355 WVPKVGLKYGTDLLLYRKGPPFYHASYSVIIELVSDHFEGSLRRPFTWKSLAALSRVSAN 414
Query: 191 VAKTLLILTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
V+K L++ + K T +P C+++ V+E +SRW + R D
Sbjct: 415 VSKELMLCYLIKPSTMTDKEMESPECMKRIKVQEVIVSRWVSSRERSD 462
>gi|395847243|ref|XP_003796290.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2 isoform 3
[Otolemur garnettii]
Length = 439
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 7/168 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I E +LW+ + TF Y AY + R K
Sbjct: 269 EYLQLSLEEAFFLVYALGCLSIYHEKEPL-TILKLWKTFTVVQPTFRTTYMAYHYFRSKG 327
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGG 190
WV + G +YG D + YR P H+ Y+V++ +++ +G R W + R+
Sbjct: 328 WVPKVGLKYGTDLLLYRKGPPFYHASYSVIIELVSDHFEGSLRRPFTWKSLAALSRVSAN 387
Query: 191 VAKTLLILTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
V+K L++ + K T +P C+++ V+E +SRW + R D
Sbjct: 388 VSKELMLCYLIKPSTMTDKEMESPECMKRIKVQEVIVSRWVSSRERSD 435
>gi|405971183|gb|EKC36035.1| tRNA-splicing endonuclease subunit Sen2 [Crassostrea gigas]
Length = 233
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 81/164 (49%), Gaps = 9/164 (5%)
Query: 82 GFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQY 141
F+L + L CL+ V E+ N +LW+ + F LY AY + R K WV +SG ++
Sbjct: 67 SFFLAYGLGCLR-VYENEKLLNLTDLWRAFCQRHNRFISLYVAYHYFRSKGWVPKSGLKF 125
Query: 142 GVDFVAYRHHPSLVHSEYAVLVLAEGEDG----ENGRLRVWSDIHCTVRLCGGVAKTLLI 197
G DF+ Y+ P H Y+V+V +D +N W+ I RL VAK LLI
Sbjct: 126 GTDFIIYKEGPPFYHGSYSVIVKMVRDDDLKEEDNLPTLTWTQIAGLNRLTEHVAKQLLI 185
Query: 198 LTINK----NGQGTATPSCLEQYAVEERTISRWSPEQCREDPAT 237
+ + N +P+ + Q+ V+E +SRW Q RE +T
Sbjct: 186 CYVIRPTHVNSDLMLSPNVISQFKVKEIVVSRWVSSQERESKST 229
>gi|148667111|gb|EDK99527.1| tRNA splicing endonuclease 2 homolog (SEN2, S. cerevisiae), isoform
CRA_a [Mus musculus]
Length = 435
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 7/158 (4%)
Query: 83 FYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYG 142
F+L ++L CL I E +LWQ A + TF Y AY + R K WV + G +YG
Sbjct: 275 FFLAYALGCLSIYYEKEPL-TIVKLWQAFTAVQPTFRTTYMAYHYFRSKGWVPKVGLKYG 333
Query: 143 VDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTI 200
D + YR P H+ Y+V++ L + +G R W + R+ G V+K L++ +
Sbjct: 334 TDLLLYRKGPPFYHASYSVIIELLDDNYEGSLRRPFSWKSLAALSRVSGNVSKELMLCYL 393
Query: 201 NKNGQGTA----TPSCLEQYAVEERTISRWSPEQCRED 234
K TA TP C+++ V+E +SRW + R D
Sbjct: 394 IKPSTMTAEDMETPECMKRIQVQEVILSRWVSSRERSD 431
>gi|427787249|gb|JAA59076.1| Putative trna-splicing endonuclease subunit sen2 [Rhipicephalus
pulchellus]
Length = 615
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 44 ALLAVEAEQTELLNRACFGRHIVTAEKDKQW-----YQLGMEEGFYLCHSLKCLKIVGED 98
++ + ++ ELLN A G + W QL EE ++L + L CL IV +
Sbjct: 412 GIIGSDGDEVELLN-ADDGEEPEVFSTEDPWPMTESLQLFFEEAYFLSYGLGCL-IVKDG 469
Query: 99 NSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSE 158
+ +LWQ + FP Y Y H R K WVVRSG+++ D++ Y+ P H+
Sbjct: 470 DQDLELLKLWQRFCGLDDNFPARYAVYHHFRSKGWVVRSGAKFAADYLLYKDGPPFYHAT 529
Query: 159 YAVLVLAEGEDG----ENGRLRVWSDIHCTVRLCGGVAKTLLIL-TINKNGQGTATPSCL 213
++V+V + D + RL+ W + +R+ G +K++L+ I TP L
Sbjct: 530 FSVIVRSVWADNLETEPDHRLQSWPSLSGLIRVNGNASKSVLLCHVIMPRDADFTTPHVL 589
Query: 214 EQYAVEERTISRW--SPEQCREDPAT 237
+ V+E + RW S E+ R+D ++
Sbjct: 590 RSFKVQEILVRRWIVSEERERKDDSS 615
>gi|345309684|ref|XP_001514951.2| PREDICTED: tRNA-splicing endonuclease subunit Sen2-like
[Ornithorhynchus anatinus]
Length = 431
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I ++ +LW+ + TF Y AY + R K
Sbjct: 261 EYLQLSLEEAFFLVYALGCLSISYKEEPL-TITKLWEVFTVLQPTFRTTYMAYHYFRSKG 319
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGG 190
WV + G +YG D + YR P H+ Y+V+V + + +G R W + R
Sbjct: 320 WVPKVGLKYGTDLLLYRKGPPFYHASYSVVVELVDDQFEGSPRRPFTWKSLAGLNRTTAN 379
Query: 191 VAKTLLILTINKNGQGT----ATPSCLEQYAVEERTISRW--SPEQCRED 234
V+K L++ + + T +P CL++ V+E +SRW S E+C +D
Sbjct: 380 VSKELMLCYLIRPSSMTEKEMESPECLKKIKVQELILSRWVSSRERCDQD 429
>gi|149728264|ref|XP_001492417.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2 isoform 1 [Equus
caballus]
Length = 466
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 83/168 (49%), Gaps = 7/168 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I D +LW+ + TF Y AY H R K
Sbjct: 296 EYLQLSLEEAFFLVYALGCLSIYY-DKEPLTIVKLWKVFTVIQPTFRTTYMAYHHFRSKG 354
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGG 190
WV + G +YG D + YR P H+ Y+V+V + + +G R W + R+
Sbjct: 355 WVPKVGLKYGTDLLLYRKGPPFYHASYSVIVELVDDHFEGPLRRPFSWKSLAALSRVSVN 414
Query: 191 VAKTLLILTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
V+K L++ + K T +P C+++ V+E +SRW + R D
Sbjct: 415 VSKELMLCYLIKPSTMTDKEMESPECMKRIKVQEVILSRWVSSRERSD 462
>gi|349604258|gb|AEP99859.1| tRNA-splicing endonuclease subunit Sen2-like protein, partial
[Equus caballus]
Length = 306
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 83/168 (49%), Gaps = 7/168 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I D +LW+ + TF Y AY H R K
Sbjct: 136 EYLQLSLEEAFFLVYALGCLSIY-YDKEPLTIVKLWKVFTVIQPTFRTTYMAYHHFRSKG 194
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGG 190
WV + G +YG D + YR P H+ Y+V+V + + +G R W + R+
Sbjct: 195 WVPKVGLKYGTDLLLYRKGPPFYHASYSVIVELVDDHFEGPLRRPFSWKSLAALSRVSVN 254
Query: 191 VAKTLLILTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
V+K L++ + K T +P C+++ V+E +SRW + R D
Sbjct: 255 VSKELMLCYLIKPSTMTDKEMESPECMKRIKVQEVILSRWVSSRERSD 302
>gi|147905189|ref|NP_001085705.1| tRNA splicing endonuclease 2 homolog [Xenopus laevis]
gi|49116749|gb|AAH73227.1| MGC80553 protein [Xenopus laevis]
Length = 460
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 81/168 (48%), Gaps = 7/168 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL EE F+L ++L CL I + +LW+ A + +F Y AY H R K
Sbjct: 290 EYLQLSREEAFFLVYALGCLTISYKKEPL-TIQKLWEVFCAAQPSFSTKYLAYHHFRSKG 348
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRV--WSDIHCTVRLCGG 190
WV + G +YG D + YR P H+ Y+V+V + GE LR W + R
Sbjct: 349 WVPKVGLKYGTDLLLYRKGPPFYHASYSVIVELVNDKGEGTPLRPLSWRSLAGLHRTTAN 408
Query: 191 VAKTLLILTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
V+K LL + K T +P+C+ + V+E +SRW + R D
Sbjct: 409 VSKELLFCYLIKPAGFTDSDFISPACIHRIKVQELIVSRWVSSRERMD 456
>gi|156062816|ref|XP_001597330.1| hypothetical protein SS1G_01524 [Sclerotinia sclerotiorum 1980]
gi|154696860|gb|EDN96598.1| hypothetical protein SS1G_01524 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 685
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 115/261 (44%), Gaps = 51/261 (19%)
Query: 14 SSGRSHVQNHLRF-------TFLSIQSEAHAVLAGYSALLAVEAEQTELLNRACFGRHIV 66
S+ S Q +RF TFL Q + +A E+ + +++ +V
Sbjct: 435 STSVSDRQKSVRFSPIVEQTTFLPSQPPSPG------RTVASTEEKPDEISKLVLDEEMV 488
Query: 67 TAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTK----NDDELWQYMKAK-------- 114
+D++ +QL MEE F+L + L L ++ D TK N D + K+
Sbjct: 489 I--EDQEHFQLTMEEAFFLSYGLGALTVL--DPVTKSGISNQDLFSLFRKSSYFPPVSNP 544
Query: 115 ----KETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDG 170
+ F + Y Y H R WVVR G+++ VD++ Y P H+E+AVL+L D
Sbjct: 545 SLSTDDPFLINYVVYHHFRSLGWVVRGGTKFSVDYLLYNRGPVFSHAEFAVLILPSYSDP 604
Query: 171 ------------ENGRLRVWSDIHCTVRLCGGVAKTLLIL------TINKNGQGTATPSC 212
+ + R WS +HC R+ V KTL+++ ++ + + +
Sbjct: 605 YWSSGPFLQNYVKGKQERSWSWMHCINRVITQVKKTLILVYVDIPAPVDGSIKENSVDEL 664
Query: 213 LEQYAVEERTISRWSPEQCRE 233
L++Y V E + RWSP + R+
Sbjct: 665 LQKYKVREVVLKRWSPNRSRD 685
>gi|301627309|ref|XP_002942818.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2, partial
[Xenopus (Silurana) tropicalis]
Length = 323
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 79/168 (47%), Gaps = 7/168 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL EE F+L +L CL V + +LW+ A + +F Y AY H R K
Sbjct: 153 EYLQLSREEAFFLVFALGCL-TVSYNKEPLTILKLWEVFSAAQASFSTTYMAYHHFRSKG 211
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRV--WSDIHCTVRLCGG 190
WV + G +YG D + YR P H+ Y+V+V + E LR W + R
Sbjct: 212 WVPKVGLKYGTDLLLYRKGPPFYHASYSVIVELVNDKCEGAPLRPLSWRSLAGLHRTTAN 271
Query: 191 VAKTLLILTINKNGQGTAT----PSCLEQYAVEERTISRWSPEQCRED 234
V+K LL + K T T P+C+ + V+E +SRW + R D
Sbjct: 272 VSKELLFCYLIKPAGFTDTDLMSPACINRIKVQELIVSRWVSSRERLD 319
>gi|302854398|ref|XP_002958707.1| hypothetical protein VOLCADRAFT_108274 [Volvox carteri f.
nagariensis]
gi|300255947|gb|EFJ40227.1| hypothetical protein VOLCADRAFT_108274 [Volvox carteri f.
nagariensis]
Length = 1683
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 76 QLGMEEGFYLCHSLKCLKI-----------VGEDNSTKNDDELWQYMKAKKETFPLLYKA 124
+L +EE F+L + L+CL++ ED + + LW + + F Y A
Sbjct: 271 RLTLEEAFFLHYVLRCLEVYELHPALPIPAAAEDVQLLDTEALWNSCRGIRSNFVTSYAA 330
Query: 125 YSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLA--------EGEDGENGRLR 176
Y HL+ K W+ RSG YGVDFV Y+ HP HS++ VLV+ G +
Sbjct: 331 YHHLKCKGWIPRSGLLYGVDFVVYQLHPVGAHSDFGVLVMPLGSGPGGSSRSGGPHAPPL 390
Query: 177 VWSDIHCTVRLCGGVAKTLLILTI-NKNGQGTATPSCLEQYAVEE 220
W D+ T RL V K L++L + + G TP CL +AV +
Sbjct: 391 SWLDLQITNRLINQVVKRLVLLYLYERPGPDHTTPRCLSNFAVAD 435
>gi|56556326|gb|AAH87754.1| tsen2 protein [Xenopus (Silurana) tropicalis]
Length = 493
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 79/168 (47%), Gaps = 7/168 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL EE F+L +L CL V + +LW+ A + +F Y AY H R K
Sbjct: 323 EYLQLSREEAFFLVFALGCL-TVSYNKEPLTILKLWEVFSAAQASFSTTYMAYHHFRSKG 381
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRV--WSDIHCTVRLCGG 190
WV + G +YG D + YR P H+ Y+V+V + E LR W + R
Sbjct: 382 WVPKVGLKYGTDLLLYRKGPPFYHASYSVIVELVNDKCEGAPLRPLSWRSLAGLHRTTAN 441
Query: 191 VAKTLLILTINKNGQGTAT----PSCLEQYAVEERTISRWSPEQCRED 234
V+K LL + K T T P+C+ + V+E +SRW + R D
Sbjct: 442 VSKELLFCYLIKPAGFTDTDLMSPACINRIKVQELIVSRWVSSRERLD 489
>gi|344275999|ref|XP_003409797.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2 isoform 1
[Loxodonta africana]
Length = 465
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 7/168 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I E +LW+ + +F Y AY + R K
Sbjct: 295 EYLQLSLEEAFFLVYALGCLSIYYEQEPL-TIVKLWKAFTVVQPSFRTTYMAYHYFRSKG 353
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGG 190
WV + G +YG D + YR P H+ Y+V++ L + +G R W + R+
Sbjct: 354 WVPKVGLKYGTDLLLYRKGPPFYHASYSVIIELLDDRYEGSLRRPFSWKSLAALSRVSVN 413
Query: 191 VAKTLLILTINK----NGQGTATPSCLEQYAVEERTISRWSPEQCRED 234
V+K L++ + K Q +P C+++ V+E +SRW + R D
Sbjct: 414 VSKELMLCYLIKPSTMTDQEMESPECMKRIKVQEVIVSRWVSSRERSD 461
>gi|291393512|ref|XP_002713200.1| PREDICTED: tRNA-intron nuclease 2 [Oryctolagus cuniculus]
Length = 458
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 83/168 (49%), Gaps = 7/168 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I E +LW+ A + TF Y AY + R K
Sbjct: 288 EYLQLSLEEAFFLVYALGCLSIYYEKEPL-TIMKLWEAFSAVQPTFRTTYLAYHYFRSKG 346
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGG 190
WV + G +YG D + YR P H+ Y+V+V + + G R W + R+
Sbjct: 347 WVPKVGLKYGTDLLLYRKGPPFYHASYSVIVELVDDRFQGTARRPFSWRALAALSRVSAN 406
Query: 191 VAKTLLILTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
V+K L++ + K T +P C+++ V+E +SRW + R D
Sbjct: 407 VSKELMLCYLIKPSTMTDEEMDSPECMKRIQVQEVILSRWVSSRERSD 454
>gi|350591439|ref|XP_003132420.3| PREDICTED: tRNA-splicing endonuclease subunit Sen2 [Sus scrofa]
Length = 463
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 7/168 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I E +LW + TF Y AY H R K
Sbjct: 293 EYLQLSLEEAFFLVYALGCLSIYYEKEPL-TIVKLWNAFTRVQPTFRTTYMAYHHFRSKG 351
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGG 190
WV + G +YG D + YR P H+ Y+V++ + + +G R W + R+
Sbjct: 352 WVPKVGLKYGTDLLLYRKGPPFYHASYSVIIELVDDCFEGTLRRPFSWRSLAALSRVSVS 411
Query: 191 VAKTLLILTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
V+K L++ + K T +P C++Q V+E +SRW + R D
Sbjct: 412 VSKELMLCYVIKPSTMTDREMESPECMKQIKVQEVILSRWVSSRERGD 459
>gi|432110904|gb|ELK34378.1| tRNA-splicing endonuclease subunit Sen2 [Myotis davidii]
Length = 458
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 9/169 (5%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIV-GEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKK 131
++ QL +EE F+L ++L CL + G++ T +LW+ A + TF Y AY + R K
Sbjct: 288 EYLQLSLEEAFFLVYALGCLSVYSGKEPLTIM--KLWKVFTAVQPTFRTTYMAYHYFRSK 345
Query: 132 NWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCG 189
WV + G +YG D + YR P H+ Y+V++ + + +G R W + R+
Sbjct: 346 GWVPKVGLKYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGSLRRPFSWKSLATLSRVSV 405
Query: 190 GVAKTLLILTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
V+K LL+ + K T +P C+++ V+E +SRW + R D
Sbjct: 406 NVSKELLLCYLIKPSTMTDKEMESPECMKRIKVQEVILSRWVSSRERSD 454
>gi|223972636|ref|NP_001138866.1| tRNA-splicing endonuclease subunit Sen2 isoform 3 [Homo sapiens]
Length = 406
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 7/168 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I E +LW+ + TF Y AY + R K
Sbjct: 236 EYLQLSLEEAFFLVYALGCLSIYYEKEPL-TIVKLWKAFTVVQPTFRTTYMAYHYFRSKG 294
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGG 190
WV + G +YG D + YR P H+ Y+V++ + + +G R W + R+
Sbjct: 295 WVPKVGLKYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGSLRRPLSWKSLAALSRVSVN 354
Query: 191 VAKTLLILTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
V+K L++ + K T +P C+++ V+E +SRW + R D
Sbjct: 355 VSKELMLCYLIKPSTMTDKEMESPECMKRIKVQEVILSRWVSSRERSD 402
>gi|296225878|ref|XP_002758727.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2 [Callithrix
jacchus]
Length = 324
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 7/168 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I E +LW+ + TF Y AY + R K
Sbjct: 154 EYLQLSLEEAFFLVYALGCLSIYYEKEPL-TIVKLWKAFTVVQPTFRTTYMAYHYFRAKG 212
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGG 190
WV + G +YG D + YR P H+ Y+V++ + + +G R W + R+
Sbjct: 213 WVPKVGLKYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGSLRRPFSWKSLAALSRVSVN 272
Query: 191 VAKTLLILTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
V+K L++ + K T +P C+++ V+E +SRW + R D
Sbjct: 273 VSKELMLCYLIKPSAMTDKEMESPECMKRIKVQEVILSRWVSSRERSD 320
>gi|39644952|gb|AAH21975.2| TSEN2 protein [Homo sapiens]
Length = 255
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 7/168 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I E +LW+ + TF Y AY + R K
Sbjct: 85 EYLQLSLEEAFFLVYALGCLSIYYEKEPL-TIVKLWKAFTVVQPTFRTTYMAYHYFRSKG 143
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGG 190
WV + G +YG D + YR P H+ Y+V++ + + +G R W + R+
Sbjct: 144 WVPKVGLKYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGSLRRPLSWKSLAALSRVSVN 203
Query: 191 VAKTLLILTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
V+K L++ + K T +P C+++ V+E +SRW + R D
Sbjct: 204 VSKELMLCYLIKPSTMTDKEMESPECMKRIKVQEVILSRWVSSRERSD 251
>gi|301771794|ref|XP_002921311.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-like isoform 1
[Ailuropoda melanoleuca]
Length = 470
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 83/168 (49%), Gaps = 7/168 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I E +LW+ + TF Y AY + R K
Sbjct: 300 EYLQLSLEEAFFLAYALGCLSIYYEKEPL-TVMKLWKAFTVVQPTFRTTYMAYHYFRSKG 358
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGG 190
WV + G +YG D + YR P H+ Y+V+V + + +G R W + R+
Sbjct: 359 WVPKVGLKYGTDLLLYRKGPPFYHASYSVIVELVDDHFEGSLRRPFSWRSLAALSRVSVN 418
Query: 191 VAKTLLILTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
V+K L++ + K T +P C+++ V+E +SRW + R D
Sbjct: 419 VSKELMLCYLIKPSTMTDKEMESPECMKRIKVQEVILSRWVSSRERSD 466
>gi|357609601|gb|EHJ66534.1| hypothetical protein KGM_18473 [Danaus plexippus]
Length = 347
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 6/152 (3%)
Query: 77 LGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVR 136
L ++E F+L + L CLKIV E++ N +E W + F Y Y H R K +VV+
Sbjct: 195 LTLQEAFFLVYGLGCLKIVKEEDQVLNIEECWSLFCNTDKYFVSKYIVYHHFRSKGYVVK 254
Query: 137 SGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLL 196
SG ++G DF+ Y+ P + H++Y V++ E + W + VR+ K ++
Sbjct: 255 SGIKFGGDFLLYKEGPEVNHADYIVVIKTENDTFN------WISLLGHVRMATTTVKEVM 308
Query: 197 ILTINKNGQGTATPSCLEQYAVEERTISRWSP 228
I + G+ P L +Y+V E +SR P
Sbjct: 309 IAEVKSEGENLRLPHDLCKYSVRELVLSRNLP 340
>gi|57101028|ref|XP_541765.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2 isoform 2 [Canis
lupus familiaris]
Length = 470
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 83/168 (49%), Gaps = 7/168 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I E +LW+ + TF Y AY + R K
Sbjct: 300 EYLQLSLEEAFFLVYALGCLSIYYEKEPL-TIMKLWKAFTVVQPTFRTTYMAYHYFRSKG 358
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGG 190
WV + G +YG D + YR P H+ Y+V++ + + +G R W + R+
Sbjct: 359 WVPKVGLKYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGSLRRPFSWRSLAALNRVSVN 418
Query: 191 VAKTLLILTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
V+K L++ + K T +P C++Q V+E +SRW + R D
Sbjct: 419 VSKELMLCYLIKPSTMTDKEMESPECMKQIKVQEVILSRWVSSRERSD 466
>gi|397511909|ref|XP_003846211.1| PREDICTED: LOW QUALITY PROTEIN: tRNA-splicing endonuclease subunit
Sen2 [Pan paniscus]
Length = 484
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 7/168 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I E +LW+ + TF Y AY + R K
Sbjct: 314 EYLQLSLEEAFFLVYALGCLSIYYEKEPL-TIVKLWKAFTVVQPTFRTTYMAYHYFRSKG 372
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGG 190
WV + G +YG D + YR P H+ Y+V++ + + +G R W + R+
Sbjct: 373 WVPKVGLKYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGSLRRPLSWKSLAALSRVSVN 432
Query: 191 VAKTLLILTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
V+K L++ + K T +P C+++ V+E +SRW + R D
Sbjct: 433 VSKELMLCYLIKPSTMTDKEMESPECMKRIKVQEVILSRWVSSRERSD 480
>gi|13376882|ref|NP_079541.1| tRNA-splicing endonuclease subunit Sen2 isoform 1 [Homo sapiens]
gi|223972632|ref|NP_001138864.1| tRNA-splicing endonuclease subunit Sen2 isoform 1 [Homo sapiens]
gi|50428914|sp|Q8NCE0.2|SEN2_HUMAN RecName: Full=tRNA-splicing endonuclease subunit Sen2; AltName:
Full=tRNA-intron endonuclease Sen2; Short=HsSen2
gi|13278819|gb|AAH04178.1| TSEN2 protein [Homo sapiens]
gi|13278906|gb|AAH04211.1| TSEN2 protein [Homo sapiens]
gi|18043116|gb|AAH19582.1| TRNA splicing endonuclease 2 homolog (S. cerevisiae) [Homo sapiens]
gi|119584531|gb|EAW64127.1| tRNA splicing endonuclease 2 homolog (S. cerevisiae), isoform CRA_a
[Homo sapiens]
gi|119584532|gb|EAW64128.1| tRNA splicing endonuclease 2 homolog (S. cerevisiae), isoform CRA_a
[Homo sapiens]
gi|119584534|gb|EAW64130.1| tRNA splicing endonuclease 2 homolog (S. cerevisiae), isoform CRA_a
[Homo sapiens]
gi|312151752|gb|ADQ32388.1| tRNA splicing endonuclease 2 homolog (S. cerevisiae) [synthetic
construct]
Length = 465
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 7/168 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I E +LW+ + TF Y AY + R K
Sbjct: 295 EYLQLSLEEAFFLVYALGCLSIYYEKEPL-TIVKLWKAFTVVQPTFRTTYMAYHYFRSKG 353
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGG 190
WV + G +YG D + YR P H+ Y+V++ + + +G R W + R+
Sbjct: 354 WVPKVGLKYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGSLRRPLSWKSLAALSRVSVN 413
Query: 191 VAKTLLILTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
V+K L++ + K T +P C+++ V+E +SRW + R D
Sbjct: 414 VSKELMLCYLIKPSTMTDKEMESPECMKRIKVQEVILSRWVSSRERSD 461
>gi|343959428|dbj|BAK63571.1| tRNA-splicing endonuclease subunit Sen2 [Pan troglodytes]
Length = 465
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 7/168 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I E +LW+ + TF Y AY + R K
Sbjct: 295 EYLQLSLEEAFFLVYALGCLSIYYEKEPL-TIVKLWKAFTVVQPTFRTTYMAYHYFRSKG 353
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGG 190
WV + G +YG D + YR P H+ Y+V++ + + +G R W + R+
Sbjct: 354 WVPKVGLKYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGSLRRPLSWKSLAALSRVSVN 413
Query: 191 VAKTLLILTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
V+K L++ + K T +P C+++ V+E +SRW + R D
Sbjct: 414 VSKELMLCYLIKPSTMTDKEMESPECMKRIKVQEVILSRWVSSRERSD 461
>gi|221040900|dbj|BAH12091.1| unnamed protein product [Homo sapiens]
Length = 438
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 7/168 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I E +LW+ + TF Y AY + R K
Sbjct: 268 EYLQLSLEEAFFLVYALGCLSIYYEKEPL-TIVKLWKAFTVVQPTFRTTYMAYHYFRSKG 326
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGG 190
WV + G +YG D + YR P H+ Y+V++ + + +G R W + R+
Sbjct: 327 WVPKVGLKYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGSLRRPLSWKSLAALSRVSVN 386
Query: 191 VAKTLLILTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
V+K L++ + K T +P C+++ V+E +SRW + R D
Sbjct: 387 VSKELMLCYLIKPSTMTDKEMESPECMKRIKVQEVILSRWVSSRERSD 434
>gi|114585462|ref|XP_001154322.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2 isoform 5 [Pan
troglodytes]
gi|114585464|ref|XP_001154384.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2 isoform 6 [Pan
troglodytes]
gi|410036563|ref|XP_003950080.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2 [Pan
troglodytes]
gi|410220964|gb|JAA07701.1| tRNA splicing endonuclease 2 homolog [Pan troglodytes]
gi|410263342|gb|JAA19637.1| tRNA splicing endonuclease 2 homolog [Pan troglodytes]
gi|410303236|gb|JAA30218.1| tRNA splicing endonuclease 2 homolog [Pan troglodytes]
gi|410333293|gb|JAA35593.1| tRNA splicing endonuclease 2 homolog [Pan troglodytes]
Length = 465
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 7/168 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I E +LW+ + TF Y AY + R K
Sbjct: 295 EYLQLSLEEAFFLVYALGCLSIYYEKEPL-TIVKLWKAFTVVQPTFRTTYMAYHYFRSKG 353
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGG 190
WV + G +YG D + YR P H+ Y+V++ + + +G R W + R+
Sbjct: 354 WVPKVGLKYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGSLRRPLSWKSLAALSRVSVN 413
Query: 191 VAKTLLILTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
V+K L++ + K T +P C+++ V+E +SRW + R D
Sbjct: 414 VSKELMLCYLIKPSTMTDKEMESPECMKRIKVQEVILSRWVSSRERSD 461
>gi|158255802|dbj|BAF83872.1| unnamed protein product [Homo sapiens]
Length = 465
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 9/169 (5%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I E +LW+ + TF Y AY + R K
Sbjct: 295 EYLQLSLEEAFFLVYALGCLSIYYEKEPL-TIVKLWKAFTVVQPTFRTTYMAYHYFRSKG 353
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLR---VWSDIHCTVRLCG 189
WV + G +YG D + YR P H+ Y+V ++ +D G LR W + R+
Sbjct: 354 WVPKVGLKYGTDLLLYRKGPPFYHASYSV-IIELVDDHFEGSLRWPLSWKSLAALSRVSV 412
Query: 190 GVAKTLLILTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
V+K L++ + K T +P C+++ V+E +SRW + R D
Sbjct: 413 NVSKELMLCYLIKPSTMTDKEMESPECMKRIKVQEVILSRWVSSRERSD 461
>gi|71895431|ref|NP_001025765.1| tRNA-splicing endonuclease subunit Sen2 [Gallus gallus]
gi|82081231|sp|Q5ZIN2.1|SEN2_CHICK RecName: Full=tRNA-splicing endonuclease subunit Sen2; AltName:
Full=tRNA-intron endonuclease Sen2
gi|53135278|emb|CAG32411.1| hypothetical protein RCJMB04_24m3 [Gallus gallus]
Length = 461
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 82/161 (50%), Gaps = 9/161 (5%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIV-GEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKK 131
++ QL +EE F+L ++L CL + GE+ T +LW+ K +F Y AY + R K
Sbjct: 291 EYLQLSLEEAFFLVYALGCLTVYYGEEPLTIL--KLWEIFSEVKPSFKTTYMAYHYFRSK 348
Query: 132 NWVVRSGSQYGVDFVAYRHHPSLVHSEYAVL--VLAEGEDGENGRLRVWSDIHCTVRLCG 189
WV + G +YG D + YR P H+ Y+V+ ++ + +G R W + R
Sbjct: 349 GWVPKVGLKYGTDLLLYRKGPPFYHASYSVIAELVDDNFEGSLRRPLSWMSLSGLNRTTV 408
Query: 190 GVAKTLLILTINKNGQGT----ATPSCLEQYAVEERTISRW 226
+K LL+ + K T ATP CL++ V+E ++RW
Sbjct: 409 NASKELLLCYLIKPSDMTEEEMATPECLKRIKVQELIVTRW 449
>gi|449266325|gb|EMC77389.1| tRNA-splicing endonuclease subunit Sen2 [Columba livia]
Length = 460
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 81/161 (50%), Gaps = 9/161 (5%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIV-GEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKK 131
++ QL +EE F+L ++L CL I GE+ T +LW+ K F Y AY + R K
Sbjct: 290 EYLQLSLEEAFFLVYALGCLSIYYGEEPLTIL--KLWEVFSEVKPNFKTTYMAYHYFRSK 347
Query: 132 NWVVRSGSQYGVDFVAYRHHPSLVHSEYAVL--VLAEGEDGENGRLRVWSDIHCTVRLCG 189
WV + G +YG D + YR P H+ Y+VL ++ + +G R W + R
Sbjct: 348 GWVPKVGLKYGTDLLLYRKGPPFYHASYSVLAELVDDSFEGSLRRPLSWKSLSGLNRTTA 407
Query: 190 GVAKTLLILTINKNGQGT----ATPSCLEQYAVEERTISRW 226
+K L++ + + T +TP C+++ V+E +SRW
Sbjct: 408 NASKELMLCYLIRPSDMTEKEMSTPECMKRIKVQELIVSRW 448
>gi|297670629|ref|XP_002813463.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2 isoform 3 [Pongo
abelii]
gi|297670631|ref|XP_002813464.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2 isoform 4 [Pongo
abelii]
gi|297670633|ref|XP_002813465.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2 isoform 5 [Pongo
abelii]
Length = 465
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 7/168 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I E +LW+ + TF Y AY + R K
Sbjct: 295 EYLQLSLEEAFFLVYALGCLSIYYEKEPL-TIVKLWKAFTVVQPTFRTTYMAYHYFRSKG 353
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGG 190
WV + G +YG D + YR P H+ Y+V++ + + +G R W + R+
Sbjct: 354 WVPKVGLKYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGSLRRPFSWKSLAALSRVSIN 413
Query: 191 VAKTLLILTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
V+K L++ + K T +P C+++ V+E +SRW + R D
Sbjct: 414 VSKELMLCYLIKPSTMTDKEMESPECMKRIKVQEVILSRWVSSRERSD 461
>gi|326927825|ref|XP_003210089.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-like [Meleagris
gallopavo]
Length = 463
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 82/161 (50%), Gaps = 9/161 (5%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIV-GEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKK 131
++ QL +EE F+L ++L CL + GE+ T +LW+ K +F Y AY + R K
Sbjct: 293 EYLQLSLEEAFFLVYALGCLTVYYGEEPLTIL--KLWEIFSEVKPSFKTTYMAYHYFRSK 350
Query: 132 NWVVRSGSQYGVDFVAYRHHPSLVHSEYAVL--VLAEGEDGENGRLRVWSDIHCTVRLCG 189
WV + G +YG D + YR P H+ Y+V+ ++ + +G R W + R
Sbjct: 351 GWVPKVGLKYGTDLLLYRKGPPFYHASYSVIAELVDDNFEGSLRRPLSWMSLSGLNRTTV 410
Query: 190 GVAKTLLILTINKNGQGT----ATPSCLEQYAVEERTISRW 226
+K L++ + K T ATP CL++ V+E ++RW
Sbjct: 411 NASKELMLCYLIKPSDMTEEEMATPECLKRIKVQELIVTRW 451
>gi|410951732|ref|XP_003982547.1| PREDICTED: LOW QUALITY PROTEIN: tRNA-splicing endonuclease subunit
Sen2 [Felis catus]
Length = 468
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 7/168 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I E +LW+ + TF Y AY + R K
Sbjct: 298 EYLQLSLEEAFFLVYALGCLSIYYEKEPL-TILKLWKAFPIVQPTFRTTYMAYHYFRSKG 356
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGG 190
WV + G +YG D + YR P H+ Y+V++ + + +G R W + R+
Sbjct: 357 WVPKVGLKYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGSLRRPFSWRSLAALSRVSVN 416
Query: 191 VAKTLLILTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
V+K L++ + K T +P C+++ V+E +SRW + R D
Sbjct: 417 VSKELMLCYLIKPSTMTDKEMESPECMKRIKVQEVILSRWVSSRERSD 464
>gi|260793636|ref|XP_002591817.1| hypothetical protein BRAFLDRAFT_88756 [Branchiostoma floridae]
gi|229277028|gb|EEN47828.1| hypothetical protein BRAFLDRAFT_88756 [Branchiostoma floridae]
Length = 449
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 78/168 (46%), Gaps = 9/168 (5%)
Query: 76 QLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVV 135
QL +EE F+L + L CL +V E ++WQ + F Y Y +LR K WV
Sbjct: 277 QLSLEEAFFLSYGLGCLSVVDESGCLMTLTDMWQSFTQTQHNFLPNYIVYHYLRSKGWVP 336
Query: 136 RSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGR-----LRVWSDIHCTVRLCGG 190
R+G +YG +V Y PS HS Y+V+V D R W + R+
Sbjct: 337 RAGVKYGAPWVLYWKGPSFYHSSYSVVVQTVSGDSLKPSPGLSCCRSWLLLAGMDRITQH 396
Query: 191 VAKTLLILTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
V K +++ + + T +PSC+ ++ V+E + RW Q RE+
Sbjct: 397 VGKEVVLCFVVRPADMTEEEQTSPSCISRFRVQEVVMKRWVSSQEREE 444
>gi|224065485|ref|XP_002187180.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2 [Taeniopygia
guttata]
Length = 338
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 9/161 (5%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIV-GEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKK 131
++ QL +EE F+L ++L CL I GE+ + +LW+ K F Y AY + R K
Sbjct: 168 EYLQLSLEEAFFLVYALGCLSIYYGEEPLSIV--KLWEVFSEVKPDFKTTYMAYHYFRGK 225
Query: 132 NWVVRSGSQYGVDFVAYRHHPSLVHSEYAVL--VLAEGEDGENGRLRVWSDIHCTVRLCG 189
WV + G +YG D + YR P H+ Y+V+ ++ + +G R W + R
Sbjct: 226 GWVPKVGLKYGTDLLLYRKGPPFYHASYSVIAELVDDNFEGPLRRPLSWMSLSGLNRTTA 285
Query: 190 GVAKTLLILTINKNGQGTA----TPSCLEQYAVEERTISRW 226
+K L++ + + TA TP C+++ V+E +SRW
Sbjct: 286 NASKELMLCYLIRPSDMTAEEMSTPECMKRIKVQELIVSRW 326
>gi|355746517|gb|EHH51131.1| hypothetical protein EGM_10461 [Macaca fascicularis]
Length = 465
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 7/168 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I E +LW+ + TF Y AY + R K
Sbjct: 295 EYLQLSLEEAFFLVYALGCLSIYYEKEPL-TIVKLWKAFTVVQPTFRTTYMAYHYFRSKG 353
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGG 190
WV + G +YG D + YR P H+ Y+V++ + + +G R W + R+
Sbjct: 354 WVPKVGLKYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGCLRRPFSWKSLAALSRVSVN 413
Query: 191 VAKTLLILTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
V+K L++ + K T +P C+++ V+E +SRW + R D
Sbjct: 414 VSKELMLCYLIKPSTMTDKEMESPECMKRIKVQEVILSRWVSSRERSD 461
>gi|355559439|gb|EHH16167.1| hypothetical protein EGK_11411 [Macaca mulatta]
Length = 465
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 7/168 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I E +LW+ + TF Y AY + R K
Sbjct: 295 EYLQLSLEEAFFLVYALGCLSIYYEKEPL-TIVKLWKAFTVVQPTFRTTYMAYHYFRSKG 353
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGG 190
WV + G +YG D + YR P H+ Y+V++ + + +G R W + R+
Sbjct: 354 WVPKVGLKYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGCLRRPFSWKSLAALSRVSVN 413
Query: 191 VAKTLLILTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
V+K L++ + K T +P C+++ V+E +SRW + R D
Sbjct: 414 VSKELMLCYLIKPSTMTDKEMESPECMKRIKVQEVILSRWVSSRERSD 461
>gi|380816780|gb|AFE80264.1| tRNA-splicing endonuclease subunit Sen2 isoform 1 [Macaca mulatta]
Length = 465
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 7/168 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I E +LW+ + TF Y AY + R K
Sbjct: 295 EYLQLSLEEAFFLVYALGCLSIYYEKEPL-TIVKLWKAFTVVQPTFRTTYMAYHYFRSKG 353
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGG 190
WV + G +YG D + YR P H+ Y+V++ + + +G R W + R+
Sbjct: 354 WVPKVGLKYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGCLRRPFSWKSLAALSRVSVN 413
Query: 191 VAKTLLILTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
V+K L++ + K T +P C+++ V+E +SRW + R D
Sbjct: 414 VSKELMLCYLIKPSTMTDKEMESPECMKRIKVQEVILSRWVSSRERSD 461
>gi|383421829|gb|AFH34128.1| tRNA-splicing endonuclease subunit Sen2 isoform 1 [Macaca mulatta]
Length = 465
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 7/168 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I E +LW+ + TF Y AY + R K
Sbjct: 295 EYLQLSLEEAFFLVYALGCLSIYYEKEPL-TIVKLWKAFTVVQPTFRTTYMAYHYFRSKG 353
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGG 190
WV + G +YG D + YR P H+ Y+V++ + + +G R W + R+
Sbjct: 354 WVPKVGLKYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGCLRRPFSWKSLAALSRVSVN 413
Query: 191 VAKTLLILTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
V+K L++ + K T +P C+++ V+E +SRW + R D
Sbjct: 414 VSKELMLCYLIKPSTMTDKEMESPECMKRIKVQEVILSRWVSSRERSD 461
>gi|402859347|ref|XP_003894124.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2 isoform 1 [Papio
anubis]
gi|402859351|ref|XP_003894126.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2 isoform 3 [Papio
anubis]
Length = 465
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 7/168 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I E +LW+ + TF Y AY + R K
Sbjct: 295 EYLQLSLEEAFFLVYALGCLSIYYEKEPL-TIVKLWKAFTVVQPTFRTTYMAYHYFRSKG 353
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGG 190
WV + G +YG D + YR P H+ Y+V++ + + +G R W + R+
Sbjct: 354 WVPKVGLKYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGCLRRPFSWKSLAALSRVSVN 413
Query: 191 VAKTLLILTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
V+K L++ + K T +P C+++ V+E +SRW + R D
Sbjct: 414 VSKELMLCYLIKPSTMTDKEMESPECMKRIKVQEVILSRWVSSRERSD 461
>gi|391340124|ref|XP_003744395.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-like
[Metaseiulus occidentalis]
Length = 279
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 2/152 (1%)
Query: 77 LGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVR 136
L EE ++L L L + E + DEL+ ++ FP+ Y AY H R+K W+VR
Sbjct: 125 LSPEESYFLAFGLGVLSVRTESGQHLSLDELFTRFESNDSLFPIRYAAYHHFRQKGWIVR 184
Query: 137 SGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWS-DIHCTVRLCGGVAKTL 195
SG G D++ Y+ P H+ + V V + D E + DI R+ G V+K+L
Sbjct: 185 SGMTMGADYLLYKDGPPFTHASFIVSVQTDQNDPEPSTPALTERDIDSLTRISGSVSKSL 244
Query: 196 LI-LTINKNGQGTATPSCLEQYAVEERTISRW 226
L+ + G P L+ + E +RW
Sbjct: 245 LLCYVLRPPGLNLKDPQSLKAMKICEVITNRW 276
>gi|119183402|ref|XP_001242743.1| hypothetical protein CIMG_06639 [Coccidioides immitis RS]
gi|392865650|gb|EAS31456.2| tRNA-intron endonuclease [Coccidioides immitis RS]
Length = 473
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 91/202 (45%), Gaps = 40/202 (19%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKIVGEDNST-----------------KNDDELWQYMK 112
+D++ QL EE F+L + L L++ + S+ DEL
Sbjct: 274 QDEEHLQLSNEEAFFLAYGLGVLQVYDHNMSSVLPNSHLLSLFRRHSYFPPRDELMHL-- 331
Query: 113 AKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGE---- 168
+ F + Y AY H R WVVRSG ++GVDF+ Y P H+E+AV+VL E
Sbjct: 332 EPDDRFIVSYVAYHHFRSLGWVVRSGVKFGVDFLLYNRGPVFSHAEFAVVVLPAYEHPYW 391
Query: 169 -DGENGRLRV-------WSDIHCTVRLCGGVAKTLLILTIN-----KNGQGTA----TPS 211
+ E R V W +HC R+ V KTL++L + Q T+ +
Sbjct: 392 SETEERRAAVAKKLPHTWWWLHCVNRVQAQVKKTLVLLYVEIPPTAPEPQDTSGELDIGA 451
Query: 212 CLEQYAVEERTISRWSPEQCRE 233
L+ YAV E T+ RW P + R+
Sbjct: 452 LLKTYAVREMTMRRWVPNRSRD 473
>gi|198438429|ref|XP_002127990.1| PREDICTED: similar to tRNA splicing endonuclease 2 homolog [Ciona
intestinalis]
Length = 314
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 39 LAGYSALLAVEAEQTELLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGED 98
++G+S+ + + +Q E A K ++ L EE F+L + L CL + +
Sbjct: 108 ISGHSSTIPTQHKQHE----------TALAAKVEEILVLTYEEAFFLSYGLGCLFVKDYN 157
Query: 99 NSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSE 158
N ++ W + FP+ Y AY H R K WV R G +YG D V YR P H+
Sbjct: 158 GENINIEQQWNIFCKRNMRFPVTYCAYHHFRSKGWVPRDGIRYGGDLVLYRKGPPYYHAS 217
Query: 159 YAVLVLAEGEDG--------ENGRLRVWSDIHCTVRLCGGVAKTLL----ILTINKNGQG 206
Y V++++ + R W + +RL V+K ++ ++
Sbjct: 218 YIVIIVSVDAETLQETVFREAKNRTFSWPTMSGQLRLATSVSKEVMLCHVVVPTKYLKSD 277
Query: 207 TATPSCLEQYAVEERTISRWSPEQCRE 233
+ SCL + V+E +SRW + RE
Sbjct: 278 SCDVSCLNNFQVKETIVSRWISTKERE 304
>gi|344276001|ref|XP_003409798.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2 isoform 2
[Loxodonta africana]
Length = 439
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 7/161 (4%)
Query: 80 EEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGS 139
EE F+L ++L CL I E +LW+ + +F Y AY + R K WV + G
Sbjct: 276 EEAFFLVYALGCLSIYYEQEPL-TIVKLWKAFTVVQPSFRTTYMAYHYFRSKGWVPKVGL 334
Query: 140 QYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLI 197
+YG D + YR P H+ Y+V++ L + +G R W + R+ V+K L++
Sbjct: 335 KYGTDLLLYRKGPPFYHASYSVIIELLDDRYEGSLRRPFSWKSLAALSRVSVNVSKELML 394
Query: 198 LTINK----NGQGTATPSCLEQYAVEERTISRWSPEQCRED 234
+ K Q +P C+++ V+E +SRW + R D
Sbjct: 395 CYLIKPSTMTDQEMESPECMKRIKVQEVIVSRWVSSRERSD 435
>gi|307187911|gb|EFN72824.1| tRNA-splicing endonuclease subunit Sen2 [Camponotus floridanus]
Length = 441
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 73/171 (42%), Gaps = 10/171 (5%)
Query: 77 LGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVR 136
L EE F+L L CL++V D S + + W Y +K F Y Y + R K WVV+
Sbjct: 265 LTFEETFFLLFGLGCLQVVHFDGSLLDINNAWLYFCKEKPDFLQKYVVYHYYRSKGWVVK 324
Query: 137 SGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGED-----GENGRLRVWSDIHCTVRLCGGV 191
G +YG DF+ Y+ P H+ Y V+V D W + RL
Sbjct: 325 PGLKYGGDFLLYKEGPPFFHASYIVIVEVVDADSLVIESTLSTRSTWDSLFGLQRLSETA 384
Query: 192 AKTLLILTI-----NKNGQGTATPSCLEQYAVEERTISRWSPEQCREDPAT 237
AK +L + +P L ++ V E RW+P+Q RED T
Sbjct: 385 AKEILFAQVLWPSSVPQDISATSPEILSEFTVRELLWRRWNPKQHREDVPT 435
>gi|390354075|ref|XP_784204.3| PREDICTED: uncharacterized protein LOC578976 [Strongylocentrotus
purpuratus]
Length = 789
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 77/167 (46%), Gaps = 7/167 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL EE F+L + L CL + + + E+W+ + + +F Y Y R K
Sbjct: 613 EYLQLSYEEAFFLSYGLGCLSLRNANEEQMDLTEMWKTFRRHQPSFVANYIVYHFFRSKG 672
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGE---DGENGRLRVWSDIHCTVRLCG 189
WV ++G ++G DF+ Y+ P H+ Y V V E D + W+ + R+
Sbjct: 673 WVPKTGLKFGADFILYKKGPPFYHASYCVYVFMINEEDIDHQGIHKMNWASLMGRDRVIE 732
Query: 190 GVAKTLLILTINKNG----QGTATPSCLEQYAVEERTISRWSPEQCR 232
AK L+ + K + +P+C+ + V+E + RW P + R
Sbjct: 733 NAAKELMFCFVIKPSKLLQKDLDSPACIPHFKVQEMVMKRWVPSRGR 779
>gi|327265853|ref|XP_003217722.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-like [Anolis
carolinensis]
Length = 455
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 7/160 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I + + +LW+ + F Y AY + R K
Sbjct: 285 EYLQLSLEEAFFLVYALGCLSI-HYNEVPLSIVKLWEVFSEAQPNFKATYMAYHYFRSKG 343
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV-LAEGE-DGENGRLRVWSDIHCTVRLCGG 190
WV + G +YG D + YR P H+ Y+V+V L G+ +G R W + R
Sbjct: 344 WVPKVGLKYGTDLLLYRKGPPFYHASYSVIVELVNGDFEGPLRRPFSWKSLSGLNRTTAN 403
Query: 191 VAKTLLILTINKNGQGTA----TPSCLEQYAVEERTISRW 226
V+K LL + K T +P C ++ V+E ++RW
Sbjct: 404 VSKELLFCYLIKPSDMTEKEMLSPECFKRIKVQELILNRW 443
>gi|189240005|ref|XP_001810064.1| PREDICTED: similar to tRNA splicing endonuclease 2 homolog
[Tribolium castaneum]
gi|270011792|gb|EFA08240.1| hypothetical protein TcasGA2_TC005868 [Tribolium castaneum]
Length = 281
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 9/161 (5%)
Query: 76 QLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVV 135
LG+EE F+L ++ CL + D + ++LW+ K + F Y AY + R KNWVV
Sbjct: 119 NLGLEEAFFLATAINCLDVY--DEVCLSPEQLWEVFKKSDKYFAQNYIAYYYFRAKNWVV 176
Query: 136 RSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGED-----GENGRLRVWSDIHCTVRLCGG 190
+ G ++G DF+ Y+ P H+ Y V++ D +N R + + RLC
Sbjct: 177 KPGIKFGGDFLLYKQGPPFYHASYVVIICVVDGDLKPIKSQNRRSMRKTHLMGLNRLCET 236
Query: 191 VAKTLLILTINKNGQGTATPSCLE--QYAVEERTISRWSPE 229
K LLI I G + E ++ ++E + RW+P+
Sbjct: 237 ARKELLICEIVCPGVSPDSIPFNEIGKFTIKETIMKRWTPQ 277
>gi|338714444|ref|XP_003363080.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2 isoform 2 [Equus
caballus]
Length = 440
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 7/161 (4%)
Query: 80 EEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGS 139
E+ F+L ++L CL I D +LW+ + TF Y AY H R K WV + G
Sbjct: 277 EQAFFLVYALGCLSIY-YDKEPLTIVKLWKVFTVIQPTFRTTYMAYHHFRSKGWVPKVGL 335
Query: 140 QYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLI 197
+YG D + YR P H+ Y+V+V + + +G R W + R+ V+K L++
Sbjct: 336 KYGTDLLLYRKGPPFYHASYSVIVELVDDHFEGPLRRPFSWKSLAALSRVSVNVSKELML 395
Query: 198 LTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
+ K T +P C+++ V+E +SRW + R D
Sbjct: 396 CYLIKPSTMTDKEMESPECMKRIKVQEVILSRWVSSRERSD 436
>gi|258570957|ref|XP_002544282.1| predicted protein [Uncinocarpus reesii 1704]
gi|237904552|gb|EEP78953.1| predicted protein [Uncinocarpus reesii 1704]
Length = 468
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 91/200 (45%), Gaps = 38/200 (19%)
Query: 71 DKQWYQLGMEEGFYLCHSLKCLKIVGEDN-----STKNDDELWQ---YMKAKKETFPL-- 120
D++ QL EE F+L + L L++ E N ST L++ Y + E PL
Sbjct: 270 DEEHLQLSNEEAFFLVYGLGVLQVY-ESNMKSAISTPQLLSLFRRHSYFPPRDEFLPLEP 328
Query: 121 ------LYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGE-----D 169
Y AY H R WVVRSG ++GVD + Y P H+E+AV++L E +
Sbjct: 329 DDRFIVSYVAYHHFRSLGWVVRSGVKFGVDLLLYNRGPVFSHAEFAVVLLPAYEHPYWSE 388
Query: 170 GENGRLRV-------WSDIHCTVRLCGGVAKTLLILTI---------NKNGQGTATPSCL 213
E R V W HC R+ V KTL++ + ++G + L
Sbjct: 389 TEERRAAVTKKCRHTWWWFHCVNRVQAQVKKTLVLCYVEIPPPAPETEEDGGELDIGALL 448
Query: 214 EQYAVEERTISRWSPEQCRE 233
E+YAV E TI RW P + R+
Sbjct: 449 ERYAVREVTIRRWVPNRSRD 468
>gi|303319809|ref|XP_003069904.1| tRNA intron endonuclease, catalytic C-terminal domain containing
protein [Coccidioides posadasii C735 delta SOWgp]
gi|240109590|gb|EER27759.1| tRNA intron endonuclease, catalytic C-terminal domain containing
protein [Coccidioides posadasii C735 delta SOWgp]
Length = 473
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 88/202 (43%), Gaps = 40/202 (19%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKIVGEDNST-----------------KNDDELWQYMK 112
+D++ QL EE F+L + L L++ + S+ DEL
Sbjct: 274 QDEEHLQLSNEEAFFLAYGLGVLQVYDHNMSSVLPNSHLLSLFRRHSYFPPRDELMHL-- 331
Query: 113 AKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGE---- 168
+ F + Y AY H R WVVRSG ++GVDF+ Y P H+E+AV+VL E
Sbjct: 332 EPDDRFIVSYVAYHHFRSLGWVVRSGVKFGVDFLLYNRGPVFSHAEFAVVVLPAYEHPYW 391
Query: 169 -DGENGRLRV-------WSDIHCTVRLCGGVAKTLLILTINKNGQGTATP---------S 211
+ E R V W +HC R+ V KTL++L + +
Sbjct: 392 SETEERRAAVAKKLPHTWWWLHCVNRVQAQVKKTLVLLYVEIPPTAPEPQDMSGELDIGA 451
Query: 212 CLEQYAVEERTISRWSPEQCRE 233
L+ YAV E T+ RW P + R+
Sbjct: 452 LLKTYAVREMTMRRWVPNRSRD 473
>gi|410926897|ref|XP_003976905.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-like [Takifugu
rubripes]
Length = 611
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 79/155 (50%), Gaps = 9/155 (5%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L +SL CL V D + +LW+ + + F L+ AY H R K
Sbjct: 251 EYLQLSLEEAFFLVYSLGCL-CVYLDQEPLSILQLWRNFCSLRTDFISLFAAYQHFRSKG 309
Query: 133 WVVR--SGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLC 188
W+ + SG++YGVDF+ YR P H+ Y+V+V + G RL W + R+
Sbjct: 310 WIPKGGSGAKYGVDFLLYRKGPPFYHASYSVVVERVHNSYSGPGMRLFSWRSLAALSRIT 369
Query: 189 GGVAKTLLILTI----NKNGQGTATPSCLEQYAVE 219
V+K L++ I + + +P CL + V+
Sbjct: 370 ANVSKELMLCYIIYPDDLSDDELRSPECLSRLKVQ 404
>gi|320034204|gb|EFW16149.1| tRNA-splicing endonuclease subunit SEN2 [Coccidioides posadasii
str. Silveira]
Length = 473
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 88/202 (43%), Gaps = 40/202 (19%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKIVGEDNST-----------------KNDDELWQYMK 112
+D++ QL EE F+L + L L++ + S+ DEL
Sbjct: 274 QDEEHLQLSNEEAFFLAYGLGVLQVYDHNMSSVLPNSHLLSLFRRHSYFPPRDELMHL-- 331
Query: 113 AKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGE---- 168
+ F + Y AY H R WVVRSG ++GVDF+ Y P H+E+AV+VL E
Sbjct: 332 EPDDRFIVSYVAYHHFRSLGWVVRSGVKFGVDFLLYNRGPVFSHAEFAVVVLPAYEHPYW 391
Query: 169 -DGENGRLRV-------WSDIHCTVRLCGGVAKTLLILTINKNGQGTATP---------S 211
+ E R V W +HC R+ V KTL++L + +
Sbjct: 392 SETEERRAAVAKKLPHTWWWLHCVNRVQAQVKKTLVLLYVEIPPTAPEPQDMSGELDIGA 451
Query: 212 CLEQYAVEERTISRWSPEQCRE 233
L+ YAV E T+ RW P + R+
Sbjct: 452 LLKTYAVREMTMRRWVPNRSRD 473
>gi|322801946|gb|EFZ22493.1| hypothetical protein SINV_07981 [Solenopsis invicta]
Length = 436
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 11/167 (6%)
Query: 77 LGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVR 136
L EE F+L L CL+++ D S + + W Y +K F Y Y + R K WVV+
Sbjct: 257 LTFEETFFLLFGLGCLQVIHFDGSPLDINSAWLYFCKEKPDFIQTYVVYHYYRSKGWVVK 316
Query: 137 SGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDG------ENGRLRVWSDIHCTVRLCGG 190
G +YG DF+ Y+ P H+ Y +++ D R W+++ RL
Sbjct: 317 PGIKYGGDFLLYQEGPPFYHASYIIIIQVADADSLVIDTTVASRTMTWNNLFGFERLSET 376
Query: 191 VAKTLLILTI-----NKNGQGTATPSCLEQYAVEERTISRWSPEQCR 232
AK +L + +P L ++ V E RW+P+Q R
Sbjct: 377 AAKEILFAQVLWPSSVPRDVSMTSPEILSEFTVRELLWRRWNPKQHR 423
>gi|301771796|ref|XP_002921312.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-like isoform 2
[Ailuropoda melanoleuca]
Length = 444
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 7/161 (4%)
Query: 80 EEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGS 139
EE F+L ++L CL I E +LW+ + TF Y AY + R K WV + G
Sbjct: 281 EEAFFLAYALGCLSIYYEKEPL-TVMKLWKAFTVVQPTFRTTYMAYHYFRSKGWVPKVGL 339
Query: 140 QYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLI 197
+YG D + YR P H+ Y+V+V + + +G R W + R+ V+K L++
Sbjct: 340 KYGTDLLLYRKGPPFYHASYSVIVELVDDHFEGSLRRPFSWRSLAALSRVSVNVSKELML 399
Query: 198 LTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
+ K T +P C+++ V+E +SRW + R D
Sbjct: 400 CYLIKPSTMTDKEMESPECMKRIKVQEVILSRWVSSRERSD 440
>gi|345786154|ref|XP_003432790.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2 isoform 1 [Canis
lupus familiaris]
Length = 444
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 7/161 (4%)
Query: 80 EEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGS 139
EE F+L ++L CL I E +LW+ + TF Y AY + R K WV + G
Sbjct: 281 EEAFFLVYALGCLSIYYEKEPL-TIMKLWKAFTVVQPTFRTTYMAYHYFRSKGWVPKVGL 339
Query: 140 QYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLI 197
+YG D + YR P H+ Y+V++ + + +G R W + R+ V+K L++
Sbjct: 340 KYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGSLRRPFSWRSLAALNRVSVNVSKELML 399
Query: 198 LTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
+ K T +P C++Q V+E +SRW + R D
Sbjct: 400 CYLIKPSTMTDKEMESPECMKQIKVQEVILSRWVSSRERSD 440
>gi|395847241|ref|XP_003796289.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2 isoform 2
[Otolemur garnettii]
Length = 440
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 82 GFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQY 141
F+L ++L CL I E +LW+ + TF Y AY + R K WV + G +Y
Sbjct: 279 AFFLVYALGCLSIYHEKEPL-TILKLWKTFTVVQPTFRTTYMAYHYFRSKGWVPKVGLKY 337
Query: 142 GVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILT 199
G D + YR P H+ Y+V++ +++ +G R W + R+ V+K L++
Sbjct: 338 GTDLLLYRKGPPFYHASYSVIIELVSDHFEGSLRRPFTWKSLAALSRVSANVSKELMLCY 397
Query: 200 INKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
+ K T +P C+++ V+E +SRW + R D
Sbjct: 398 LIKPSTMTDKEMESPECMKRIKVQEVIVSRWVSSRERSD 436
>gi|223972634|ref|NP_001138865.1| tRNA-splicing endonuclease subunit Sen2 isoform 2 [Homo sapiens]
gi|22760473|dbj|BAC11213.1| unnamed protein product [Homo sapiens]
Length = 439
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 7/161 (4%)
Query: 80 EEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGS 139
EE F+L ++L CL I E +LW+ + TF Y AY + R K WV + G
Sbjct: 276 EEAFFLVYALGCLSIYYEKEPL-TIVKLWKAFTVVQPTFRTTYMAYHYFRSKGWVPKVGL 334
Query: 140 QYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLI 197
+YG D + YR P H+ Y+V++ + + +G R W + R+ V+K L++
Sbjct: 335 KYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGSLRRPLSWKSLAALSRVSVNVSKELML 394
Query: 198 LTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
+ K T +P C+++ V+E +SRW + R D
Sbjct: 395 CYLIKPSTMTDKEMESPECMKRIKVQEVILSRWVSSRERSD 435
>gi|114585470|ref|XP_001154265.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2 isoform 4 [Pan
troglodytes]
Length = 439
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 7/161 (4%)
Query: 80 EEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGS 139
EE F+L ++L CL I E +LW+ + TF Y AY + R K WV + G
Sbjct: 276 EEAFFLVYALGCLSIYYEKEPL-TIVKLWKAFTVVQPTFRTTYMAYHYFRSKGWVPKVGL 334
Query: 140 QYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLI 197
+YG D + YR P H+ Y+V++ + + +G R W + R+ V+K L++
Sbjct: 335 KYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGSLRRPLSWKSLAALSRVSVNVSKELML 394
Query: 198 LTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
+ K T +P C+++ V+E +SRW + R D
Sbjct: 395 CYLIKPSTMTDKEMESPECMKRIKVQEVILSRWVSSRERSD 435
>gi|389609631|dbj|BAM18427.1| unknown unsecreted protein [Papilio xuthus]
Length = 319
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 85/164 (51%), Gaps = 7/164 (4%)
Query: 66 VTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAY 125
V K ++ L +E F+L + L CL+I+ ++ N ++ W+ + + F Y Y
Sbjct: 154 VNKIKIQEKLMLSKQESFFLLYGLGCLQILNNYDNVLNIEQCWKLFQEDDKYFLEKYVVY 213
Query: 126 SHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTV 185
+ R K +VV+ G ++G +F+ Y+ PS+ H+++ VL+ GE+ + W I +
Sbjct: 214 HYFRSKGYVVKPGIKFGGNFLLYKEGPSVNHADFIVLIKYAGEEYD------WISIFGHL 267
Query: 186 RLCGGVAKTLLIL-TINKNGQGTATPSCLEQYAVEERTISRWSP 228
R+ K +LI+ I N + P L++Y+V E +SR +P
Sbjct: 268 RVASTTVKEILIVEVIQPNKEELQLPKDLKEYSVREVLLSRNNP 311
>gi|303272035|ref|XP_003055379.1| tRNA-splicing endonuclease subunit Sen2 [Micromonas pusilla
CCMP1545]
gi|226463353|gb|EEH60631.1| tRNA-splicing endonuclease subunit Sen2 [Micromonas pusilla
CCMP1545]
Length = 311
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 96/227 (42%), Gaps = 57/227 (25%)
Query: 60 CFGRHIVTAEK------DKQWYQLGMEEGFYLCHSLKCLKI-----------VGEDNSTK 102
CF R++V E+ D +L EE FY+ L L + G +N +
Sbjct: 77 CFFRNVVGDERGGDSADDDPIVRLSPEEAFYVVWCLGSLTVHAPRDAADDAADGAENQIQ 136
Query: 103 ND---------------DELWQYM----------KAKKETFPLLYKAYSHLRKKNWVVRS 137
N DELW+ + F + H R W+ RS
Sbjct: 137 NPERNAPPPPSLTPLTIDELWRALLTAGMSGVNAAIAAPRFVAAAASQIHFRSAGWLPRS 196
Query: 138 GSQYGVDFVAYRHHPSLVHSEYAVLV--------LAEGEDGENGRLRV---WSDIHCTVR 186
G QYG D V YR+HPSLVHS+ V+V A G GE G L W ++ R
Sbjct: 197 GLQYGADLVLYRNHPSLVHSDCCVVVKPSSAIVSRASGVFGEGGELEKDSRWIEVQAASR 256
Query: 187 LCGGVAKTLLILTINKNGQGTA---TPSCLEQYAVEERTISRWSPEQ 230
LC V K L+ T++ G G A P CL++ +V E ++R++P++
Sbjct: 257 LCVQVNKRLVFATLDVAG-GDADFLDPECLKRLSVNEMEVTRFNPDR 302
>gi|391874451|gb|EIT83333.1| tRNA splicing endonuclease SEN2 [Aspergillus oryzae 3.042]
Length = 481
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 35/199 (17%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKIV-GEDNSTKNDDELWQ------YMKAK-------- 114
K+++ QL EE F+L + L L+IV G+ N+ + L Y +
Sbjct: 283 KNEEHLQLSNEEAFFLVYGLGALQIVDGKRNAVLSPPSLLSRFCQHSYCPPRGLSSNLEP 342
Query: 115 KETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDG---- 170
+ F + Y Y H R WVVRSG ++GVD++ Y P H+E+AV+++ E
Sbjct: 343 DDPFMISYIVYHHFRSLGWVVRSGVKFGVDYLLYNRGPVFSHAEFAVVIIPSFEHPYWSE 402
Query: 171 --------ENGRLRVWSDIHCTVRLCGGVAKTLLILTIN--------KNGQGTATPSCLE 214
+ R W +HC R+ V K+L++ ++ N + L
Sbjct: 403 TEERKAHCARKQARSWWWLHCVNRVQAQVKKSLVVCYVDVPPPLFGEANAPSEDIGALLA 462
Query: 215 QYAVEERTISRWSPEQCRE 233
+YAV E I RW P + R+
Sbjct: 463 RYAVREMLIRRWVPNRTRD 481
>gi|440635787|gb|ELR05706.1| hypothetical protein GMDG_07549 [Geomyces destructans 20631-21]
Length = 647
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 30/193 (15%)
Query: 71 DKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFP----------- 119
+++ QL MEE F+L + L L I ++ + + + +FP
Sbjct: 455 NQEHIQLTMEEAFFLSYGLGVLSIQDAHSNLPIPPQDLLPLFRQTSSFPVSATPHTRPDD 514
Query: 120 ---LLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVL------------ 164
+ Y Y H R W VR G+++GVD++ Y P H+E+AVL+L
Sbjct: 515 LFIISYVVYHHFRSLGWCVRGGTKFGVDYLLYSRGPVFSHAEFAVLILPTYSHPYWSSDD 574
Query: 165 AEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTIN----KNGQGTATPSCLEQYAVEE 220
A +D + + + W+ +HC R+ G V KTL+++ ++ N +G L +Y V E
Sbjct: 575 AIAKDVQKRQSKKWNWLHCVNRVNGQVKKTLVLVYVDVPPPVNEEGMRVDEVLARYTVRE 634
Query: 221 RTISRWSPEQCRE 233
+ RW + R+
Sbjct: 635 VVLKRWLSNRSRD 647
>gi|332022768|gb|EGI63041.1| tRNA-splicing endonuclease subunit Sen2 [Acromyrmex echinatior]
Length = 436
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 13/168 (7%)
Query: 77 LGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVR 136
L EE F+L L CL+++ D S + + W Y +K F Y Y + R K WVV+
Sbjct: 257 LTFEETFFLLFGLGCLQLIHFDGSLLDINSAWLYFCKEKPDFIQKYVVYHYYRSKGWVVK 316
Query: 137 SGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDG------ENGRLRVWSDIHCTVRLCGG 190
G +YG DF+ Y+ P H+ Y +++ D + R W+++ RL
Sbjct: 317 PGLKYGGDFLLYKEGPPFYHASYIIMIEVADADSLVIDPTVSSRSITWNNLFGFERLSET 376
Query: 191 VAKTLLIL------TINKNGQGTATPSCLEQYAVEERTISRWSPEQCR 232
AK +L +++++ T+ P L ++ V E RW+P+Q R
Sbjct: 377 AAKEILFAQVLWPSSVSRDINMTS-PEILSEFTVREILWRRWNPKQHR 423
>gi|297285235|ref|XP_001086382.2| PREDICTED: tRNA-splicing endonuclease subunit Sen2 isoform 1
[Macaca mulatta]
Length = 451
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 7/161 (4%)
Query: 80 EEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGS 139
EE F+L ++L CL I E +LW+ + TF Y AY + R K WV + G
Sbjct: 288 EEAFFLVYALGCLSIYYEKEPL-TIVKLWKAFTVVQPTFRTTYMAYHYFRSKGWVPKVGL 346
Query: 140 QYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLI 197
+YG D + YR P H+ Y+V++ + + +G R W + R+ V+K L++
Sbjct: 347 KYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGCLRRPFSWKSLAALSRVSVNVSKELML 406
Query: 198 LTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
+ K T +P C+++ V+E +SRW + R D
Sbjct: 407 CYLIKPSTMTDKEMESPECMKRIKVQEVILSRWVSSRERSD 447
>gi|443696464|gb|ELT97158.1| hypothetical protein CAPTEDRAFT_222272 [Capitella teleta]
Length = 359
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 62/131 (47%), Gaps = 6/131 (4%)
Query: 76 QLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVV 135
QL EE F+L + L CL I E + +E WQ + F Y AY HLR K WV
Sbjct: 145 QLSSEEAFFLYYGLGCLAIADESGAALTIEETWQKFSSSSPQFLPRYIAYHHLRSKGWVP 204
Query: 136 RSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDG------ENGRLRVWSDIHCTVRLCG 189
++G ++G DF+ Y+ P H Y V+V A D R W+ + C R+
Sbjct: 205 KAGVKFGGDFLLYKKGPPFYHGTYTVVVQAVSNDDCSPLPQLTPRNFSWTSLACLNRITE 264
Query: 190 GVAKTLLILTI 200
V K +++L +
Sbjct: 265 QVNKEVMLLYV 275
>gi|402859349|ref|XP_003894125.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2 isoform 2 [Papio
anubis]
Length = 439
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 7/161 (4%)
Query: 80 EEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGS 139
EE F+L ++L CL I E +LW+ + TF Y AY + R K WV + G
Sbjct: 276 EEAFFLVYALGCLSIYYEKEPL-TIVKLWKAFTVVQPTFRTTYMAYHYFRSKGWVPKVGL 334
Query: 140 QYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLI 197
+YG D + YR P H+ Y+V++ + + +G R W + R+ V+K L++
Sbjct: 335 KYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGCLRRPFSWKSLAALSRVSVNVSKELML 394
Query: 198 LTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
+ K T +P C+++ V+E +SRW + R D
Sbjct: 395 CYLIKPSTMTDKEMESPECMKRIKVQEVILSRWVSSRERSD 435
>gi|393245824|gb|EJD53334.1| hypothetical protein AURDEDRAFT_54534 [Auricularia delicata
TFB-10046 SS5]
Length = 381
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 92/194 (47%), Gaps = 30/194 (15%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKIV-GEDNSTKNDDELWQ------------YMKAK-K 115
+D ++ QL ++E F+L +L LK++ E + + +LW+ Y++ +
Sbjct: 188 EDLEYLQLTLQEAFFLAWALDTLKVLDSETHDPLSLHDLWRESQYAHFVPPSPYLEPRFD 247
Query: 116 ETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDG----- 170
F + Y Y H R WVV+SG ++ D + Y+ P H+E+AV+V ED
Sbjct: 248 NPFLVNYAVYHHYRSLGWVVKSGIKFCADLLLYKRGPVFTHAEFAVVVCPVYEDDADRST 307
Query: 171 -----ENGRLRVWSDIHCTVRLCGGVAKTLLI--LTINKNGQGTA----TPSCLEQYAVE 219
N WS + R+ V KT+++ +TI + + + +P CLE Y+V
Sbjct: 308 SPFRLANAEPFTWSWLSTIGRVNSQVQKTVILTYVTIPSSRRASTDAVNSPECLELYSVR 367
Query: 220 ERTISRWSPEQCRE 233
E + RW P + R+
Sbjct: 368 EVVLRRWVPARMRD 381
>gi|255721073|ref|XP_002545471.1| hypothetical protein CTRG_00252 [Candida tropicalis MYA-3404]
gi|240135960|gb|EER35513.1| hypothetical protein CTRG_00252 [Candida tropicalis MYA-3404]
Length = 384
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 84/184 (45%), Gaps = 33/184 (17%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKET-------FPLLYKAY 125
++ QL E F+L +L +++ G +++ +L+Q ++ E+ F + Y Y
Sbjct: 211 EYLQLQPVEAFFLKFALNRIQVDGMNSTF----DLFQTCCSQYESVVTPNNRFIVDYAVY 266
Query: 126 SHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTV 185
+ R W VRSG ++G DF+ Y+ P +H+EY VLV+ + D + W +I
Sbjct: 267 HYFRSNGWCVRSGVKFGTDFLLYKRGPPFIHAEYCVLVMTKDTDYD------WFEIAAKA 320
Query: 186 RLCGGVAKTLLILTINKNGQ----------------GTATPSCLEQYAVEERTISRWSPE 229
R+ G V KT ++ ++ Q G EQY + E RW+P
Sbjct: 321 RVIGSVKKTFVLCYVDSPSQEVFDEILSQQQSQLDHGLLFKQLFEQYKISEVVYRRWNPS 380
Query: 230 QCRE 233
+ R+
Sbjct: 381 RTRD 384
>gi|254569880|ref|XP_002492050.1| Subunit of the tRNA splicing endonuclease, which is composed of
Sen2p, Sen15p, Sen34p, and Sen54p [Komagataella pastoris
GS115]
gi|238031847|emb|CAY69770.1| Subunit of the tRNA splicing endonuclease, which is composed of
Sen2p, Sen15p, Sen34p, and Sen54p [Komagataella pastoris
GS115]
gi|328351459|emb|CCA37858.1| tRNA-intron endonuclease [Komagataella pastoris CBS 7435]
Length = 377
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 93/215 (43%), Gaps = 50/215 (23%)
Query: 33 SEAHAVLAGYSALLAVEAEQTELLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCL 92
E H Y L+ VEA L CFG + D +QL F LC + + L
Sbjct: 197 DETHIKDLEYLQLMPVEA----LFLSFCFGSKV----NDFDLFQL-----FQLCMN-RSL 242
Query: 93 KIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHP 152
++ DNS F LLY Y H + W V+SG+++G DF+ YR P
Sbjct: 243 EV---DNS-----------------FILLYMVYHHYKSHGWCVKSGTKFGSDFLLYRRGP 282
Query: 153 SLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQG------ 206
H+E+AVLV + + ++ W DI R+ GGV KTLL+ + + +
Sbjct: 283 PFQHAEFAVLVQPDYKPSDSPS-NEWIDISAISRVVGGVNKTLLLTYVTQPTKDAFQQAL 341
Query: 207 -----TATP----SCLEQYAVEERTISRWSPEQCR 232
+ TP + LE Y ++E RW P + R
Sbjct: 342 TMFSESPTPHSLRNLLELYHIDEFIYRRWLPSRNR 376
>gi|238503287|ref|XP_002382877.1| tRNA-splicing endonuclease subunit Sen2, putative [Aspergillus
flavus NRRL3357]
gi|317148411|ref|XP_001822752.2| tRNA-splicing endonuclease subunit Sen2 [Aspergillus oryzae RIB40]
gi|220691687|gb|EED48035.1| tRNA-splicing endonuclease subunit Sen2, putative [Aspergillus
flavus NRRL3357]
Length = 481
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 35/199 (17%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKIV-GEDNSTKNDDELWQ------YMKAK-------- 114
K+++ QL EE F+L + L L+IV G+ N+ + L Y +
Sbjct: 283 KNEEHLQLSNEEAFFLVYGLGALQIVDGKRNAVLSPPSLLSRFCQHSYCPPRGLSSNLEP 342
Query: 115 KETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDG---- 170
+ F + Y Y H R WVVRSG ++GVD++ Y P H+E+AV+++ E
Sbjct: 343 DDPFMISYIVYHHFRSLGWVVRSGVKFGVDYLLYNRGPVFSHAEFAVVIIPSFEHPYWSE 402
Query: 171 --------ENGRLRVWSDIHCTVRLCGGVAKTLLILTIN--------KNGQGTATPSCLE 214
+ R W +HC R+ V K+L++ ++ N + L
Sbjct: 403 TEERKAHCARKQARSWWWLHCVNRVQAQVKKSLVVCYVDVPPPLFGEANAPSEDIGALLA 462
Query: 215 QYAVEERTISRWSPEQCRE 233
+Y V E I RW P + R+
Sbjct: 463 RYTVREMLIRRWVPNRTRD 481
>gi|212535396|ref|XP_002147854.1| tRNA-splicing endonuclease subunit Sen2, putative [Talaromyces
marneffei ATCC 18224]
gi|210070253|gb|EEA24343.1| tRNA-splicing endonuclease subunit Sen2, putative [Talaromyces
marneffei ATCC 18224]
Length = 459
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 79/190 (41%), Gaps = 32/190 (16%)
Query: 76 QLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLL-------------- 121
QL EE +L + L L++ +D +T + + TFP L
Sbjct: 270 QLTNEEALFLVYGLGALQVFDQDTNTIIPTPSLIKLFTQNSTFPALSDAQPIAPDDPFLI 329
Query: 122 -YKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGED----------- 169
Y AY H R WVVRSG ++G D++ Y P H+E+AVLVL E+
Sbjct: 330 SYVAYHHFRSLGWVVRSGVKFGTDYLLYNRGPVFAHAEFAVLVLPSYENSYWESTPELKE 389
Query: 170 -GENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGTATP-----SCLEQYAVEERTI 223
+ R W +H R+ V KTL++ ++ + L QY V E +
Sbjct: 390 YSTKKQSRSWWWLHGVNRVQAQVKKTLVLCFVDVPPPSASASLDNLGETLRQYKVREILL 449
Query: 224 SRWSPEQCRE 233
RW P + R+
Sbjct: 450 RRWLPNRSRD 459
>gi|281347606|gb|EFB23190.1| hypothetical protein PANDA_010203 [Ailuropoda melanoleuca]
Length = 451
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 7/153 (4%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I E +LW+ + TF Y AY + R K
Sbjct: 300 EYLQLSLEEAFFLAYALGCLSIYYEKEPL-TVMKLWKAFTVVQPTFRTTYMAYHYFRSKG 358
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGG 190
WV + G +YG D + YR P H+ Y+V+V + + +G R W + R+
Sbjct: 359 WVPKVGLKYGTDLLLYRKGPPFYHASYSVIVELVDDHFEGSLRRPFSWRSLAALSRVSVN 418
Query: 191 VAKTLLILTINKNGQGT----ATPSCLEQYAVE 219
V+K L++ + K T +P C+++ V+
Sbjct: 419 VSKELMLCYLIKPSTMTDKEMESPECMKRIKVQ 451
>gi|156550641|ref|XP_001604779.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-like [Nasonia
vitripennis]
Length = 468
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 79/167 (47%), Gaps = 15/167 (8%)
Query: 77 LGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVR 136
L EE F+L + L CL+++ D + E W+Y ++++F Y AY + R K WVV+
Sbjct: 278 LTFEETFFLMYGLGCLRVIDFDGKFLSISETWEYFCKEQKSFLQKYVAYHYFRSKGWVVK 337
Query: 137 SGSQYGVDFVAYRHHPSLVHSEYAVLV-------LAEGEDGENGRLRVWSDIHCTVRLCG 189
+G +YG D++ Y+ P+ HS Y V++ L E N R W+ RL
Sbjct: 338 TGLKYGGDYLLYKEGPAFYHSSYIVIIDVLDAVTLKRIESKVN-RNMTWNKFIGLERLAE 396
Query: 190 GVAKTLLIL------TINKNGQGTATPSCLEQYAVEERTISRWSPEQ 230
V K +LI T+ + T+ P L Q+ V E RW Q
Sbjct: 397 TVKKEVLIAQVLWPSTVPIDIVPTS-PDVLSQFTVREVLWRRWKITQ 442
>gi|83771487|dbj|BAE61619.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 443
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 88/201 (43%), Gaps = 35/201 (17%)
Query: 68 AEKDKQWYQLGMEEGFYLCHSLKCLKIV-GEDNSTKNDDELWQ------YMKAK------ 114
++ +++ QL EE F+L + L L+IV G+ N+ + L Y +
Sbjct: 243 SKTNEEHLQLSNEEAFFLVYGLGALQIVDGKRNAVLSPPSLLSRFCQHSYCPPRGLSSNL 302
Query: 115 --KETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDG-- 170
+ F + Y Y H R WVVRSG ++GVD++ Y P H+E+AV+++ E
Sbjct: 303 EPDDPFMISYIVYHHFRSLGWVVRSGVKFGVDYLLYNRGPVFSHAEFAVVIIPSFEHPYW 362
Query: 171 ----------ENGRLRVWSDIHCTVRLCGGVAKTLLILTIN--------KNGQGTATPSC 212
+ R W +HC R+ V K+L++ ++ N +
Sbjct: 363 SETEERKAHCARKQARSWWWLHCVNRVQAQVKKSLVVCYVDVPPPLFGEANAPSEDIGAL 422
Query: 213 LEQYAVEERTISRWSPEQCRE 233
L +Y V E I RW P + R+
Sbjct: 423 LARYTVREMLIRRWVPNRTRD 443
>gi|242792924|ref|XP_002482056.1| tRNA-splicing endonuclease subunit Sen2, putative [Talaromyces
stipitatus ATCC 10500]
gi|218718644|gb|EED18064.1| tRNA-splicing endonuclease subunit Sen2, putative [Talaromyces
stipitatus ATCC 10500]
Length = 462
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 80/192 (41%), Gaps = 37/192 (19%)
Query: 76 QLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFP---------------L 120
QL EE +L + L L++ +D +T + + TFP +
Sbjct: 274 QLTHEEALFLVYGLGALQVFDQDTNTIIPTPSLIKLFTQNSTFPARSDTEPISPDDPFLI 333
Query: 121 LYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGED----------- 169
Y AY H R WVVRSG ++G D++ Y P H+E+AVLVL E+
Sbjct: 334 SYVAYHHFRSLGWVVRSGVKFGTDYLLYNRGPVFAHAEFAVLVLPSYENPYWESTPELRE 393
Query: 170 -GENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGTATPS-------CLEQYAVEER 221
+ R W +H R+ V KTL++ ++ PS L QY V E
Sbjct: 394 YSTKKQSRSWWWLHGVNRVQAQVKKTLVLCFVD---VPPPLPSSWENLGGILRQYKVREI 450
Query: 222 TISRWSPEQCRE 233
+ RW P + R+
Sbjct: 451 LLRRWLPNRSRD 462
>gi|302685844|ref|XP_003032602.1| hypothetical protein SCHCODRAFT_15250 [Schizophyllum commune H4-8]
gi|300106296|gb|EFI97699.1| hypothetical protein SCHCODRAFT_15250 [Schizophyllum commune H4-8]
Length = 425
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 41/206 (19%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTK-NDDELWQ------------------- 109
+D + QL ++E F+L ++L CL + D T +LW
Sbjct: 217 EDVEHLQLTLQEAFFLAYALDCLTVYDADTDTALTLQDLWLACQHAHIPSAGNSPIPRQI 276
Query: 110 YMK--------AKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAV 161
Y+ + F + Y Y H R WVVR G ++ DF+ Y+ P H+E+A+
Sbjct: 277 YLSLELDPSTLSPDNPFLVNYAVYHHYRSLGWVVRGGIKFCADFLLYKKGPVFTHAEFAL 336
Query: 162 LVL----AEGE---DGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQ------GTA 208
V+ A GE + E+G W+ + R+ V KTL+++ + +
Sbjct: 337 AVIPSYEAPGERTLNPEDGAPYTWTWLSTINRVNAQVMKTLVLVYVTIPARERLPAGALL 396
Query: 209 TPSCLEQYAVEERTISRWSPEQCRED 234
P+CL Y+V E + R+ P + R++
Sbjct: 397 GPACLAHYSVREIVVRRFIPARMRDE 422
>gi|358371603|dbj|GAA88210.1| tRNA-splicing endonuclease subunit Sen2 [Aspergillus kawachii IFO
4308]
Length = 493
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 80/194 (41%), Gaps = 36/194 (18%)
Query: 76 QLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFP---------------L 120
QL EE F+L + L L++ + T+ + + FP +
Sbjct: 300 QLSNEEAFFLAYGLGVLRVRDDTRKTEIPTSSLLPLLCRHSYFPPRAPSADLTPDDPFMI 359
Query: 121 LYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDG---------- 170
Y Y H R WVVRSG ++GVD++ Y P H+E+AV+V+ G
Sbjct: 360 SYVVYHHFRSLGWVVRSGVKFGVDYILYNRGPVFSHAEFAVVVVPSYGHGYWSETAERKA 419
Query: 171 --ENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGT---ATP------SCLEQYAVE 219
E R W +HC R+ V K+L++ + + TP S L +Y V
Sbjct: 420 QCEEKTARSWWWLHCVNRVQAQVKKSLVVCYVEVPPPTSYELDTPSEEDIGSMLSRYQVR 479
Query: 220 ERTISRWSPEQCRE 233
E I RW P + R+
Sbjct: 480 EMVIRRWVPNRTRD 493
>gi|406866451|gb|EKD19491.1| tRNA-splicing endonuclease subunit [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 661
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 85/198 (42%), Gaps = 35/198 (17%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKIVGED-NSTKNDDELWQYMKAKKETFPLL------- 121
K+++ QL +EE F+L ++L L ++ N + EL+ + + TFP L
Sbjct: 465 KNQEHMQLTLEETFFLSYALGALTVLSPSTNLPIPNTELFHLCR-QTSTFPPLLTPALSP 523
Query: 122 -------YKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGED----- 169
Y Y H R WVVR G ++ VDF+ Y P H+E+ VLVL D
Sbjct: 524 DDPFTTNYVVYHHFRSLGWVVRPGIKFSVDFMLYLRGPVFTHAEFCVLVLPSYSDPYWRS 583
Query: 170 -------GENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGTA-------TPSCLEQ 215
+ R W+ + C R+ V KTL++ ++ +A L +
Sbjct: 584 TEALAQYAKAKEQRTWAWMSCINRVVTQVKKTLMLTYVDIPAPVSAERERELGIAGVLAR 643
Query: 216 YAVEERTISRWSPEQCRE 233
Y V E + RWS + R+
Sbjct: 644 YRVREVVLKRWSVNRMRD 661
>gi|320169185|gb|EFW46084.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 558
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 78/194 (40%), Gaps = 45/194 (23%)
Query: 76 QLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVV 135
QL +EE +L +L CL ++ + DE W +A + F Y AY + R K WV
Sbjct: 369 QLALEEAMFLQFALGCL------DNILSIDEFWAVCRATEPRFVERYVAYHYCRSKGWVP 422
Query: 136 RSGSQYGVDFVAYRHHPSLVHSEYAVLVL--------------AEGEDGE---------- 171
R G +YGV+FV YR P HS + V + A ED E
Sbjct: 423 RPGLKYGVEFVLYRRGPVFFHSNFTVAIQLLHEDTLVPVSLDSAPYEDAEAAVDSYKPFA 482
Query: 172 -----------NGRLRVWSDIHCTVRLCGGVAKTLLILTINK----NGQGTATPSCLEQY 216
+ R W + R V K L++ + K + Q A+P C+ +
Sbjct: 483 FHNHFDPRASMDMRFATWPTLLALARTTDQVKKETLLVNVLKPRDMDEQELASPLCISRL 542
Query: 217 AVEERTISRWSPEQ 230
V E + R+ PEQ
Sbjct: 543 QVREVLLRRFVPEQ 556
>gi|407926122|gb|EKG19092.1| tRNA-splicing endonuclease [Macrophomina phaseolina MS6]
Length = 429
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 101/230 (43%), Gaps = 26/230 (11%)
Query: 29 LSIQSEAHAVLAGYSALLAVEAEQTELLNRA-CFGRHIVTAE--KDKQWYQLGMEEGFYL 85
L Q+ + +G S++ ++ + L+ + F I E ++++ QL +EE F+L
Sbjct: 199 LPTQNSTETLQSGESSIKTARSDGSALVEKTTVFSTDIAVDEPVQNEEHLQLSLEEAFFL 258
Query: 86 CHSLKCLKIVGEDNSTKNDD-ELWQYMKA-------------KKETFPLLYKAYSHLRKK 131
+ L L++V + +L+Q ++ + F L Y Y H R +
Sbjct: 259 TYGLGVLEVVAARTKKVVEPLQLFQLCRSLSYFPPSSALLVRPDDPFLLKYVVYHHYRSR 318
Query: 132 NWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEG-----EDGENGRLRVWSDIHCTVR 186
WVVR G ++ VD++ Y P H+E+AV ++ +D E W +HC R
Sbjct: 319 GWVVRDGIKFSVDYMVYNRGPVFSHAEFAVHIVPSYSDPYWKDQEKKEQSPWWWLHCVNR 378
Query: 187 LCGGVAKTLLILTIN----KNGQGTATPSCLEQYAVEERTISRWSPEQCR 232
+ V KTL+++ + G + L +Y V E + RW + R
Sbjct: 379 VQSQVLKTLVLVYVEVPPPAEGPVKDIGAFLGKYKVREFVLKRWVANRMR 428
>gi|367025063|ref|XP_003661816.1| hypothetical protein MYCTH_2301666 [Myceliophthora thermophila ATCC
42464]
gi|347009084|gb|AEO56571.1| hypothetical protein MYCTH_2301666 [Myceliophthora thermophila ATCC
42464]
Length = 689
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 87/198 (43%), Gaps = 29/198 (14%)
Query: 59 ACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGE-DNSTKNDDELWQYMKA---- 113
A R T+ +++ +QL EE F+L SL LK+V S + + L Q +A
Sbjct: 487 ADVSRDTSTSVVNREHFQLAPEEAFFLAFSLGALKVVDPVTGSPISTEHLLQLFRAHSYF 546
Query: 114 ----------KKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV 163
+ F + Y Y H R WV R G ++GVD++ Y+ P HSE+ V+V
Sbjct: 547 PPRLASSDLRPDDPFLVNYAVYHHFRSLGWVPRHGIKFGVDWILYQRGPVFDHSEFGVMV 606
Query: 164 LAEGED------GENGRLRVWSDIHCTVRLCGGVAKTLLILTIN--------KNGQGTAT 209
+ D G R WS + R+ V K+L+++ ++ K Q
Sbjct: 607 MPAYSDPAWEGYGHEEPKRSWSWLMGVNRVLSHVLKSLVLVYVDLPSPAVFEKEMQRGGI 666
Query: 210 PSCLEQYAVEERTISRWS 227
+ L++Y + E + R+S
Sbjct: 667 AAALKKYTIREVMVRRFS 684
>gi|332231716|ref|XP_003265040.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2 isoform 1
[Nomascus leucogenys]
Length = 475
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 17/178 (9%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I E +LW+ + TF Y AY + R K
Sbjct: 295 EYLQLSLEEAFFLVYALGCLSIYYEKEPL-TIVKLWKAFTVVQPTFRTTYMAYHYFRSKG 353
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVH----------SEYAVLV--LAEGEDGENGRLRVWSD 180
WV + G +YG D Y SL H S Y+V++ + + +G R W
Sbjct: 354 WVPKVGLKYGTDLCLYLRGWSLFHAYFSNAFSVFSSYSVIIELVDDHFEGSLRRPFSWKS 413
Query: 181 IHCTVRLCGGVAKTLLILTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
+ R+ V+K L++ + K T +P C+++ V+E +SRW + R D
Sbjct: 414 LAALSRVSVNVSKELMLCYLIKPSTMTDKEMESPECMKRIKVQEVILSRWVSSRERSD 471
>gi|380013765|ref|XP_003690919.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-like [Apis
florea]
Length = 450
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 78/168 (46%), Gaps = 11/168 (6%)
Query: 77 LGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVR 136
L EE F+L + L CL ++ D + + D W + + F Y Y + R K WVV+
Sbjct: 274 LTFEETFFLLYGLGCLNLIDFDGNLLDIDSAWHFFCKTDKNFIPKYVVYHYFRSKGWVVK 333
Query: 137 SGSQYGVDFVAYRHHPSLVHSEYAVLV-LAEGE---DGENGRLR--VWSDIHCTVRLCGG 190
G +YG DF+ Y+ P H+ Y VL+ + +G+ +N +R W+ + RL
Sbjct: 334 PGLKYGGDFLLYKQGPPFYHASYIVLIDILDGDALVTDQNKCMRKLTWNSLLGLERLSET 393
Query: 191 VAKTLLILTI-----NKNGQGTATPSCLEQYAVEERTISRWSPEQCRE 233
AK +L + + + L +++V E RW+P+ ++
Sbjct: 394 AAKEILFAQVLWPSSVLHTSNSLNVDILSEFSVRELLWRRWNPKHNKD 441
>gi|145242710|ref|XP_001393928.1| tRNA-splicing endonuclease subunit Sen2 [Aspergillus niger CBS
513.88]
gi|134078483|emb|CAL00346.1| unnamed protein product [Aspergillus niger]
Length = 492
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 81/194 (41%), Gaps = 36/194 (18%)
Query: 76 QLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFP---------------L 120
QL EE F+L + L L++ + +++ + + FP +
Sbjct: 299 QLSNEEAFFLAYGLGVLRVRDDTRTSEIPTSSLLPLLCQHSYFPPGAPSADPTPDDPFMI 358
Query: 121 LYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDG---------- 170
Y Y H R WVVRSG ++GVD++ Y P H+E+AV+V+ G
Sbjct: 359 SYVVYHHFRSLGWVVRSGVKFGVDYILYNRGPVFSHAEFAVVVVPSYGHGYWSETAERKA 418
Query: 171 --ENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGT---ATPS------CLEQYAVE 219
E R W +HC R+ V K+L++ + + TPS L +Y V
Sbjct: 419 QCEEKMARSWWWLHCVNRVQAQVKKSLVVCYVEVPPPTSYELDTPSEEDIGAMLARYQVR 478
Query: 220 ERTISRWSPEQCRE 233
E I RW P + R+
Sbjct: 479 EMVIRRWVPNRTRD 492
>gi|195034134|ref|XP_001988831.1| GH11377 [Drosophila grimshawi]
gi|193904831|gb|EDW03698.1| GH11377 [Drosophila grimshawi]
Length = 244
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 106/229 (46%), Gaps = 24/229 (10%)
Query: 17 RSHVQNHLRFTFLSIQSEAHAVLAGYSALLAVEAEQTE------LLNRACFGRH------ 64
RS+ ++ ++ + +E G L VE TE L + C+G+
Sbjct: 11 RSNSKDKIKIAPFPLCAEGQRGYQGVFTGLCVEVVDTEQARIRTLHDNGCYGKGSCSRGG 70
Query: 65 IVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKE---TFPLL 121
V+ E D+ LG+EE L L+ L+I + N + YM+A E FP
Sbjct: 71 PVSGEADETLL-LGLEEACLLTFFLEVLEI---RDVLGNVMDWNSYMQAALEYDKDFPYK 126
Query: 122 YKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDI 181
AY +L+ KNW+++SG ++G DF+ Y+H P H+ + VLV E+ + ++
Sbjct: 127 LAAYLYLKSKNWIIKSGIKFGGDFLIYKHGPREFHASFLVLVQTPAENIHSH--YAAKNL 184
Query: 182 HCTVRLCGGVAKTLLILTINKNGQ---GTATPSCLEQYAVEERTISRWS 227
R+ K +L+L++N+ ATP+ L+ ++E I R++
Sbjct: 185 KGVQRVAETSDKDVLVLSVNQFPDFEPKLATPTTLQSLTIQETVIRRFN 233
>gi|328789982|ref|XP_003251354.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-like [Apis
mellifera]
Length = 443
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 10/167 (5%)
Query: 77 LGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVR 136
L EE F+L + L CL ++ D + + D W + + F Y Y + R K WVV+
Sbjct: 268 LTFEETFFLLYGLGCLNLIDFDGNLLDIDSAWHFFCKTDKNFISKYVVYHYFRSKGWVVK 327
Query: 137 SGSQYGVDFVAYRHHPSLVHSEYAVLV-LAEGE---DGENGRLR--VWSDIHCTVRLCGG 190
G +YG DF+ Y+ P H+ Y V++ + +G+ +N +R W+ + RL
Sbjct: 328 PGLKYGGDFLLYKQGPPFYHASYIVIIDILDGDALVTDQNKYMRKLTWNSLLGLERLSET 387
Query: 191 VAKTLLILTINKNGQGTATPS----CLEQYAVEERTISRWSPEQCRE 233
AK +L + T + L +++V E RW+P+ ++
Sbjct: 388 AAKEILFAQVLWPSSVLHTSNLNVDILSEFSVRELLWRRWNPKHNKD 434
>gi|395331761|gb|EJF64141.1| hypothetical protein DICSQDRAFT_100817 [Dichomitus squalens
LYAD-421 SS1]
Length = 389
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 31/195 (15%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTK-NDDELWQ--------------YMKAK 114
KD + QL ++E F+L +L CL ++ S + ++W+ Y
Sbjct: 195 KDVEHLQLTLQEAFFLVWNLDCLTVLDPQTSEPLSLQQIWKAFQNVHCVPPELPVYTNRF 254
Query: 115 KETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDG---- 170
F + Y AY + R WVV+ G ++ VD + Y+ P H+E+ V+V+ ED
Sbjct: 255 DNPFLVNYAAYHYYRSLGWVVKGGIKFCVDLLLYKRGPVFHHAEFGVVVIPVYEDSRDQE 314
Query: 171 ------ENGRLRVWSDIHCTVRLCGGVAKTLLI--LTINKNGQGT----ATPSCLEQYAV 218
N WS + R+ V KTL++ +TI + + + ++P+CL Y+V
Sbjct: 315 SSPFNLPNANTFSWSWLSTINRVNSQVQKTLILTYVTIPSSSRVSTDLLSSPACLAHYSV 374
Query: 219 EERTISRWSPEQCRE 233
+ + R+ P + R+
Sbjct: 375 RDVVLRRFIPARMRD 389
>gi|402223402|gb|EJU03466.1| hypothetical protein DACRYDRAFT_114863 [Dacryopinax sp. DJM-731
SS1]
Length = 415
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 80/193 (41%), Gaps = 35/193 (18%)
Query: 76 QLGMEEGFYLCHSLKCLKIVG-EDNSTKNDDELWQY---MKAKKETF------------- 118
QL ++E F+L L CL+I+ E + LW A F
Sbjct: 223 QLTLQEAFFLAWGLDCLRILDTESGQYLSLQTLWSLCLSASASPNPFQPAARAASHRMDN 282
Query: 119 PLL--YKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENG--- 173
P L Y Y H R WVVR G ++ VD++ Y+ P H+E+AV++ ED E+
Sbjct: 283 PFLINYIVYHHFRSLGWVVRGGIKFCVDYLLYKRGPVFTHAEFAVVICPVYEDPEDAVSC 342
Query: 174 -------RLRVWSDIHCTVRLCGGVAKTLLILTIN------KNGQGTATPSCLEQYAVEE 220
WS R+ V KT+++ + NG+ P CL ++V E
Sbjct: 343 PFSSMSTEPFTWSWFSTISRVNTQVKKTVILAYVTIPAMTRTNGRTLDGPGCLGMFSVRE 402
Query: 221 RTISRWSPEQCRE 233
I R+ P + R+
Sbjct: 403 VVIRRFVPARMRD 415
>gi|383860672|ref|XP_003705813.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-like [Megachile
rotundata]
Length = 443
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 11/168 (6%)
Query: 77 LGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVR 136
L EE F+L + L CL ++ D + + D W + + F Y Y + R K WVV+
Sbjct: 267 LTFEETFFLLYGLGCLNLIDFDGNLLDVDSAWHFFCKADKNFVPKYVVYHYFRSKGWVVK 326
Query: 137 SGSQYGVDFVAYRHHPSLVHSEYAVLV-LAEGED---GENGRLR--VWSDIHCTVRLCGG 190
G +YG DF+ Y+ P H+ Y VLV + +G+ EN + WS++ RL
Sbjct: 327 PGLKYGGDFLLYKQGPPFYHASYIVLVDVIDGDTLLRNENKIMHKLTWSNLLGLERLSET 386
Query: 191 VAKTLLILTINKNGQGTATPS-----CLEQYAVEERTISRWSPEQCRE 233
AK +L + T + L +++V E R +P+ R+
Sbjct: 387 AAKEILFAQVLWPSSAIETSNSFNVDILSEFSVREVLWRRLNPKHNRD 434
>gi|195118459|ref|XP_002003754.1| GI18082 [Drosophila mojavensis]
gi|193914329|gb|EDW13196.1| GI18082 [Drosophila mojavensis]
Length = 242
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 97/211 (45%), Gaps = 30/211 (14%)
Query: 36 HAVLAGYSALLAVEAEQTE------LLNRACFGRH------IVTAEKDKQWYQLGMEEGF 83
H V G L VE TE L + C+G+ ++ E D+ LG+EE
Sbjct: 33 HGVFNG----LCVEVFNTEQNLIKTLHDNGCYGKGSNSRGGPMSGEPDESLL-LGLEEAC 87
Query: 84 YLCHSLKCLKIVGEDNSTKNDDELWQ-YMKAKKE---TFPLLYKAYSHLRKKNWVVRSGS 139
L + L L+I T N + WQ Y++A E F AY +L+ KNW+++SG
Sbjct: 88 VLAYYLNILEI----KDTSNKEIAWQAYVQAALEYDKEFVYKLAAYLYLKSKNWIIKSGI 143
Query: 140 QYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILT 199
++G DF+ Y+ P H+ + LVL D N V ++ R+ K +LIL
Sbjct: 144 KFGGDFLIYKEGPRQFHASF--LVLVHTSDYINHPHYVGKNLKGAQRVAETSDKDVLILR 201
Query: 200 INKN---GQGTATPSCLEQYAVEERTISRWS 227
+N+ ATP+ LE ++E I R++
Sbjct: 202 VNEQKDFDPALATPAALESLTIDETVIRRFN 232
>gi|344305143|gb|EGW35375.1| hypothetical protein SPAPADRAFT_64506 [Spathaspora passalidarum
NRRL Y-27907]
Length = 385
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 77/181 (42%), Gaps = 25/181 (13%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDEL-WQYMKAK----KETFPLLYKAYSH 127
++ QL + E F+L +L + I G ++ +QY + F + Y Y H
Sbjct: 210 EYLQLQLVETFFLKFALNVINIPGIASTFDLFKTCCYQYDNNQSIQPNNKFIIDYVVYHH 269
Query: 128 LRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRL 187
R W VRSG ++G DF+ Y+ P H+EY VLV+ E + W + R+
Sbjct: 270 FRSLGWCVRSGIKFGTDFLLYKRGPPFTHAEYCVLVMKPDEQEYD-----WFQMAAKARV 324
Query: 188 CGGVAKTLLILTI---------------NKNGQGTATPSCLEQYAVEERTISRWSPEQCR 232
G V K ++ + K+ G A L+QY V E RW+P + R
Sbjct: 325 IGTVKKIFVLTYVGCPSPEEFKELVSQCEKDDTGLAIGDLLQQYKVSEILYRRWAPSRTR 384
Query: 233 E 233
+
Sbjct: 385 D 385
>gi|425773693|gb|EKV12028.1| TRNA-splicing endonuclease subunit Sen2, putative [Penicillium
digitatum Pd1]
gi|425776004|gb|EKV14243.1| TRNA-splicing endonuclease subunit Sen2, putative [Penicillium
digitatum PHI26]
Length = 474
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 37/195 (18%)
Query: 76 QLGMEEGFYLCHSLKCLKIV------GEDNSTKND--DELWQ------YMKAKK------ 115
QL EE F+L +SL L+I GE +T L Q + A+
Sbjct: 280 QLSNEEAFFLAYSLGALQIYDSPLKPGEAQTTSPTTISALLQKFCHHSFQPARDGSASLQ 339
Query: 116 --ETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVL--------A 165
+ F Y Y H R WVVRSG ++G D++ Y P H+E+AV+++ +
Sbjct: 340 PDDPFMTSYAVYHHFRSLGWVVRSGIKFGTDYLLYNRGPVFSHAEFAVIIIPSYSHSYWS 399
Query: 166 EGEDGEN----GRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGTATP---SCLEQYAV 218
E ++ +N + R W +HC R+ V K+L++ + + + QY V
Sbjct: 400 ETQERKNYTAEKQARSWWWMHCVSRVQAQVLKSLVVCYVEVPPPAASIDDIGALFGQYKV 459
Query: 219 EERTISRWSPEQCRE 233
E I RW+P + R+
Sbjct: 460 REFLIKRWTPNRTRD 474
>gi|255949114|ref|XP_002565324.1| Pc22g14000 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592341|emb|CAP98688.1| Pc22g14000 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 474
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 37/195 (18%)
Query: 76 QLGMEEGFYLCHSLKCLKI------VGEDNSTKN--DDELWQ------YMKAKK------ 115
QL EE F+L +SL L+I +GE ST + L Q + A+
Sbjct: 280 QLSNEEAFFLAYSLGALQIYDSPSKLGEVQSTSSITTSALLQQFCHHSFQPARDASASLL 339
Query: 116 --ETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVL--------A 165
+ F + Y Y H R WV+RSG ++G D++ Y P H+E+AV+++ +
Sbjct: 340 PDDPFMISYTVYHHFRSLGWVIRSGVKFGTDYLLYNRGPVFSHAEFAVVIIPSYTHPYWS 399
Query: 166 EGEDGEN----GRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGTATP---SCLEQYAV 218
E E+ +N + R W +H R+ V K+L++ ++ + + QY V
Sbjct: 400 ETEERKNYTGEKQARSWWWMHSVSRVQAQVLKSLVVCYVDVPPPAASLDDIGALFGQYKV 459
Query: 219 EERTISRWSPEQCRE 233
E I RW P + R+
Sbjct: 460 REFLIKRWIPNRTRD 474
>gi|145352690|ref|XP_001420671.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580906|gb|ABO98964.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 382
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 78/180 (43%), Gaps = 33/180 (18%)
Query: 80 EEGFYLCHSLKCLKIVGEDNSTKNDDE--------------LWQYMKAK-KETFPLLYKA 124
E+ +Y+C L+CL +V ED E LW+ + F L A
Sbjct: 193 EDAYYMCAFLRCL-VVSEDGDEDAAREIRLGLGTREMDCETLWRVFRRDCGHAFALKCAA 251
Query: 125 YSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGE-------DGENGRLR- 176
H R W+ RSG QYG DFV Y+ HPSLVHS+ V+++ + D ++ R
Sbjct: 252 TVHFRLTGWLPRSGLQYGADFVLYQRHPSLVHSDSTVVLVPDAAARRSFQIDDDDAPHRG 311
Query: 177 --------VWSDIHCTVRLCGGVAKTLLILTINKNGQGT-ATPSCLEQYAVEERTISRWS 227
W D+ T RL V+K + I+ PSCL+ V E +SR++
Sbjct: 312 VALDNGWPDWPDLQATSRLAVQVSKKFIEAHISAPKNVNWNEPSCLQHIYVNEIEVSRFN 371
>gi|260948438|ref|XP_002618516.1| hypothetical protein CLUG_01975 [Clavispora lusitaniae ATCC 42720]
gi|238848388|gb|EEQ37852.1| hypothetical protein CLUG_01975 [Clavispora lusitaniae ATCC 42720]
Length = 384
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 74/171 (43%), Gaps = 26/171 (15%)
Query: 81 EGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKA-------KKETFPLLYKAYSHLRKKNW 133
E F+L +L +K+ N L Q +A + F L Y Y H R W
Sbjct: 222 EVFFLAFALDVVKVTHNHNVLS----LKQTFEACTGDNVVPQNKFILDYVVYHHFRSLGW 277
Query: 134 VVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAK 193
VRSG ++G DF+ Y+ P +H+EY VLV+ ++ + W DI R+ GV K
Sbjct: 278 CVRSGIKFGCDFLLYKRGPPFMHAEYTVLVIPSDQES----WKAWEDIMAVSRVVSGVKK 333
Query: 194 TLLILTIN-----------KNGQGTATPSCLEQYAVEERTISRWSPEQCRE 233
L+++ ++ ++ L Y V E RW+P + R+
Sbjct: 334 ILILVYVDVPATEVFDSVYRDMDRGKFMELLSLYRVTEVVWRRWNPSRTRD 384
>gi|194884391|ref|XP_001976247.1| GG22764 [Drosophila erecta]
gi|190659434|gb|EDV56647.1| GG22764 [Drosophila erecta]
Length = 233
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 11/186 (5%)
Query: 48 VEAEQTE-LLNRACFG-----RHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNST 101
V+ EQ + L + CFG R + + + LGMEE +L H L L I
Sbjct: 43 VDPEQAKSLYDNGCFGKGSKSRGGPASGDEDETLLLGMEESCFLAHYLNVLDITNSAGCF 102
Query: 102 KNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAV 161
+ + K + +TF +Y +L+ KNWV++SG ++G DF+ Y+ P L H+ + V
Sbjct: 103 MDFHMFVEVAKEQNDTFVENLASYVYLKSKNWVIKSGIKFGGDFLIYKQSPRLYHASFLV 162
Query: 162 LVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGTATPSCLEQYAVEER 221
+V G D ++ + + + R+ K +L+LT+ + + + P L++ V E
Sbjct: 163 IVQKPG-DSDHYQSKNLKGVQ---RVAETSDKDVLLLTV-QQPKNISCPRNLQEATVTET 217
Query: 222 TISRWS 227
+ R++
Sbjct: 218 IVRRFN 223
>gi|330791955|ref|XP_003284056.1| hypothetical protein DICPUDRAFT_147816 [Dictyostelium purpureum]
gi|325085985|gb|EGC39382.1| hypothetical protein DICPUDRAFT_147816 [Dictyostelium purpureum]
Length = 387
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 21/156 (13%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIV------------------GEDNSTK-NDDELWQYMKA 113
++ QL + E FYL + L CL I+ G+ N K +E ++ +
Sbjct: 171 EFLQLSLCEAFYLQYGLGCLTILRPVKLDDKLKDPSNIPNNGKKNMVKMGIEEAFKEFQL 230
Query: 114 KKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGE 171
+ F Y Y + R W+ RSG +YG DF+ Y+ P L+H++Y +++ + +
Sbjct: 231 VEPDFVDKYIVYHYFRSLGWIPRSGLKYGCDFILYKLKPDLIHAQYGIVIQKFNSNKSVD 290
Query: 172 NGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGT 207
RL+ W ++ C R+ VAK +++ + K+ + T
Sbjct: 291 KNRLQTWDELSCINRVSETVAKGIIVCNVFKDDKDT 326
>gi|169615597|ref|XP_001801214.1| hypothetical protein SNOG_10957 [Phaeosphaeria nodorum SN15]
gi|111060336|gb|EAT81456.1| hypothetical protein SNOG_10957 [Phaeosphaeria nodorum SN15]
Length = 471
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 109/264 (41%), Gaps = 64/264 (24%)
Query: 33 SEAHAVLAGYSALLAVEAEQTELLNRACFGRHIVTAE-KDKQWYQLGMEEGFYLCHSLKC 91
+A V+A S + +E E+ L A G+ + + KD++ QL EE F+L ++L
Sbjct: 209 PDAGDVVAVGSNDITLEVERM-LAEEAADGQALSLDDIKDQEHLQLTPEEAFFLTYTLGA 267
Query: 92 LKIVGED-------------------NSTKNDDELWQYMKAKKE---------------- 116
L +V ED NS + E+ Q ++
Sbjct: 268 LCVVSEDGPTDSYPTWFLLRLYALHGNSPVPEQEMRQLQNVLRKYEHDNIVLSDVSNIPS 327
Query: 117 -----TFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVL------- 164
F L Y + H R WVVR G ++ VD++ Y P+ H+E+A++++
Sbjct: 328 VEPDSQFILRYVVFHHFRSLGWVVRPGIKFAVDYLLYLRGPAFHHAEFAIMIIPSYSHPY 387
Query: 165 ----AEGEDGENGRLRV-----WSDIHCTVRLCGGVAKTLLILTI------NKNGQGTAT 209
E E G R + W +H R+ V KTL+++ + +K+
Sbjct: 388 WTEAPEHESGIEARKKELGKKDWWWLHRVNRVQTAVFKTLVLVYVEIPPPWDKDKMEVDI 447
Query: 210 PSCLEQYAVEERTISRWSPEQCRE 233
S L+QY V E + RWSP + R+
Sbjct: 448 GSVLKQYTVREVILKRWSPNRNRD 471
>gi|170032313|ref|XP_001844026.1| tRNA-splicing endonuclease subunit Sen2 [Culex quinquefasciatus]
gi|167872312|gb|EDS35695.1| tRNA-splicing endonuclease subunit Sen2 [Culex quinquefasciatus]
Length = 319
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 21/168 (12%)
Query: 63 RHIVTAEKD----KQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETF 118
R+ + E+D ++ L +EE +L L LK+ D S + L + A K+ F
Sbjct: 136 RNALKVEEDPFLIRENLSLSLEEAMFLERELNVLKLQAFDGSVLTEKNLVEKFAAIKKDF 195
Query: 119 PLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAE---------GED 169
Y A+ +L+ +NW++RSG ++G +F+ Y+ P H+ Y VL A G +
Sbjct: 196 IPSYAAFMYLKSRNWIIRSGLKFGGNFLLYQKGPQFFHASYIVLTQAYQSGKILTTCGRN 255
Query: 170 GENGRLRVWSDIHCTVRLCGGVAKTLLILTIN-KNGQGTATP-SCLEQ 215
EN D C R+ AK LLIL ++ G A P CL +
Sbjct: 256 LEN------YDFQCFNRIAETTAKDLLILEVHYPEGLDPADPHECLRR 297
>gi|328899926|gb|AEB54652.1| tRNA_splicing nuclease 2 [Procambarus clarkii]
Length = 188
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 23/145 (15%)
Query: 76 QLGMEEGFYLCHSLKCLKIVGEDNSTKND-----------------DELWQYMKAKKETF 118
QL EE +L ++L CL + ++ KN D LW F
Sbjct: 8 QLLPEEALFLAYALGCLIVSKKETGMKNKNGKRSSSPHTYVSEMTIDSLWSTFTDDDPKF 67
Query: 119 PLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV------LAEGEDGEN 172
P+ Y Y H R K WVV+SG ++G D+V Y P HS+Y +++ + ++ +
Sbjct: 68 PIKYAVYHHYRTKGWVVKSGLKFGADWVLYPVGPPFYHSQYTIMIQCVWADTLDKDETLS 127
Query: 173 GRLRVWSDIHCTVRLCGGVAKTLLI 197
R W +I T R+ V KT LI
Sbjct: 128 WRELSWINISATERMNNQVNKTPLI 152
>gi|225683508|gb|EEH21792.1| tRNA-splicing endonuclease subunit Sen2 [Paracoccidioides
brasiliensis Pb03]
Length = 486
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 87/203 (42%), Gaps = 39/203 (19%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDE-----LWQ--YMKAKKETFP--- 119
K+++ QL EE F+L + L L++ D +T L Q Y + + P
Sbjct: 284 KNEEHLQLSNEEAFFLVYGLGVLQVYDSDRTTILTATSLLPLLRQHSYFPPRDSSMPGEP 343
Query: 120 -----LLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDG---- 170
L Y Y H R WV+RSG ++GVD++ Y P H+E+AV +L D
Sbjct: 344 DDPFILSYVIYHHFRSLGWVIRSGVKFGVDYLLYNRGPVFSHAEFAVCLLPAYSDPYWRV 403
Query: 171 -ENGRL-------RVWSDIHCTVRLCGGVAKTLLILTI------------NKNGQGTATP 210
E R R W +HC R+ V K+L++ + ++
Sbjct: 404 TEERRQMIAKKQGRTWWWLHCVNRVQAQVKKSLILCYVEVPPPRPVAVDGERDCDELDIG 463
Query: 211 SCLEQYAVEERTISRWSPEQCRE 233
+ L++Y V E +I RW P + R+
Sbjct: 464 ALLKKYKVREMSIRRWVPNRSRD 486
>gi|296808893|ref|XP_002844785.1| tRNA-splicing endonuclease subunit SEN2 [Arthroderma otae CBS
113480]
gi|238844268|gb|EEQ33930.1| tRNA-splicing endonuclease subunit SEN2 [Arthroderma otae CBS
113480]
Length = 464
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 84/199 (42%), Gaps = 36/199 (18%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLL-------- 121
+D++ QL E+ F+L + L L + + +T + + + FP L
Sbjct: 267 EDEEHLQLSSEDAFFLSYGLGVLDVYDDTGNTVLQPQSLLTLLRQHSYFPPLGPSTIPQP 326
Query: 122 -------YKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAE------GE 168
Y AY H R WVVRSG ++GVD + Y P H+E+AV +L E
Sbjct: 327 DDLFMISYVAYHHFRSLGWVVRSGVKFGVDLLLYNKGPVFSHAEFAVNLLPSYSHPYWKE 386
Query: 169 DGENGRL------RVWSDIHCTVRLCGGVAKTLLI--------LTINKNGQGTATPSCLE 214
E + R W +HC R+ V K+L++ LT NK + L+
Sbjct: 387 TEERRKYVATKLNRTWWWLHCINRVQAQVKKSLILCFVEIPPPLTENKPDEQDIG-KLLK 445
Query: 215 QYAVEERTISRWSPEQCRE 233
Y V E + RW P + R+
Sbjct: 446 SYEVRELAVKRWVPNRSRD 464
>gi|336363818|gb|EGN92189.1| hypothetical protein SERLA73DRAFT_117634 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380975|gb|EGO22127.1| hypothetical protein SERLADRAFT_362541 [Serpula lacrymans var.
lacrymans S7.9]
Length = 404
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 80/190 (42%), Gaps = 32/190 (16%)
Query: 76 QLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQ-YMKAKKETF-------------PLL 121
QL E F+L +L CL + + ++W + A T P L
Sbjct: 215 QLTFPEAFFLSWTLDCLTVCNSEGEPLTLAQVWTLFQDAHSPTLLLSIPPPQRRFDNPFL 274
Query: 122 --YKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDG--------- 170
Y Y H R WVV+SG ++ VD++ Y+ P H+E+A++V ED
Sbjct: 275 VNYAVYHHYRSLGWVVKSGIKFCVDYLLYKRGPVFHHAEFAIVVCPVYEDPADQTNSPFD 334
Query: 171 -ENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQG------TATPSCLEQYAVEERTI 223
+N WS + R+ V KTL++ + ++P+CL Y+V E +
Sbjct: 335 LQNASPFSWSWLSTINRVNSQVQKTLILTYVTIPALSRLREDVLSSPACLAHYSVREVVL 394
Query: 224 SRWSPEQCRE 233
R+ P + R+
Sbjct: 395 RRFIPARMRD 404
>gi|261202314|ref|XP_002628371.1| tRNA-splicing endonuclease subunit SEN2 [Ajellomyces dermatitidis
SLH14081]
gi|239590468|gb|EEQ73049.1| tRNA-splicing endonuclease subunit SEN2 [Ajellomyces dermatitidis
SLH14081]
Length = 497
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 86/205 (41%), Gaps = 41/205 (20%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKIVGED-NSTKNDDELW------QYMKAKKETFP--- 119
K+++ QL EE +L + L L++ D S + L Y ++ + P
Sbjct: 293 KNEEHLQLSNEEALFLVYGLGVLQVYNSDRTSILSASSLLTVFRQHSYFPPRESSAPAQP 352
Query: 120 -----LLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDG---- 170
L Y Y H R WV+RSG ++GVD++ Y P H+E+AV +L D
Sbjct: 353 DDPFMLSYVVYHHFRSLGWVIRSGVKFGVDYLLYNRGPVFSHAEFAVCLLPAYSDPYWTA 412
Query: 171 -ENGRL-------RVWSDIHCTVRLCGGVAKTLLILTI------------NKNGQGTATP 210
E R R W +HC R+ V K+L++ + + G+G
Sbjct: 413 TEERRQKTAKKEGRTWWWLHCVNRVQAQVKKSLVLCYVEVPPPHTQPPPTDATGEGGELD 472
Query: 211 --SCLEQYAVEERTISRWSPEQCRE 233
+ L Y V E TI RW P + R+
Sbjct: 473 IGTLLRTYKVREMTIKRWVPNRSRD 497
>gi|327353137|gb|EGE81994.1| tRNA-splicing endonuclease subunit SEN2 [Ajellomyces dermatitidis
ATCC 18188]
Length = 497
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 86/205 (41%), Gaps = 41/205 (20%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKIVGED-NSTKNDDELW------QYMKAKKETFP--- 119
K+++ QL EE +L + L L++ D S + L Y ++ + P
Sbjct: 293 KNEEHLQLSNEEALFLVYGLGVLQVYNSDRTSILSASSLLTGFRQHSYFPPRESSAPAQP 352
Query: 120 -----LLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDG---- 170
L Y Y H R WV+RSG ++GVD++ Y P H+E+AV +L D
Sbjct: 353 DDPFMLSYVVYHHFRSLGWVIRSGVKFGVDYLLYNRGPVFSHAEFAVCLLPAYSDPYWTA 412
Query: 171 -ENGRL-------RVWSDIHCTVRLCGGVAKTLLILTI------------NKNGQGTATP 210
E R R W +HC R+ V K+L++ + + G+G
Sbjct: 413 TEERRQKTAKKEGRTWWWLHCVNRVQAQVKKSLVLCYVEVPPPHTQPPPTDATGEGGELD 472
Query: 211 --SCLEQYAVEERTISRWSPEQCRE 233
+ L Y V E TI RW P + R+
Sbjct: 473 IGTLLRTYKVREMTIKRWVPNRSRD 497
>gi|350405669|ref|XP_003487512.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-like [Bombus
impatiens]
Length = 450
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 71/164 (43%), Gaps = 11/164 (6%)
Query: 77 LGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVR 136
L EE F+L + L CL ++ D + + D W + F Y Y + R K WVV+
Sbjct: 275 LTFEETFFLLYGLGCLNLIDFDGNLLDIDSAWHIFCKTDKNFISKYVVYHYFRSKGWVVK 334
Query: 137 SGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGED----GENGRLR--VWSDIHCTVRLCGG 190
G +YG DF+ Y+ P H+ Y V++ D ++ R+ W+ + RL
Sbjct: 335 PGLKYGGDFLLYKQGPPFYHASYIVIIDTLDSDTLITDQDKRMHKLTWNSLLGLERLSET 394
Query: 191 VAKTLLILTINKNGQGTATPSCLE-----QYAVEERTISRWSPE 229
AK +L + T L +++V E RW+P+
Sbjct: 395 TAKEILFAQVLWPSSALQTSDSLNVDLLSEFSVRELLWRRWNPK 438
>gi|239612195|gb|EEQ89182.1| tRNA-splicing endonuclease subunit Sen2 [Ajellomyces dermatitidis
ER-3]
Length = 443
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 86/205 (41%), Gaps = 41/205 (20%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKIVGED-NSTKNDDELW------QYMKAKKETFP--- 119
K+++ QL EE +L + L L++ D S + L Y ++ + P
Sbjct: 239 KNEEHLQLSNEEALFLVYGLGVLQVYNSDRTSILSASSLLTGFRQHSYFPPRESSAPAQP 298
Query: 120 -----LLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDG---- 170
L Y Y H R WV+RSG ++GVD++ Y P H+E+AV +L D
Sbjct: 299 DDPFMLSYVVYHHFRSLGWVIRSGVKFGVDYLLYNRGPVFSHAEFAVCLLPAYSDPYWTA 358
Query: 171 -ENGRL-------RVWSDIHCTVRLCGGVAKTLLILTI------------NKNGQGTATP 210
E R R W +HC R+ V K+L++ + + G+G
Sbjct: 359 TEERRQKTAKKEGRTWWWLHCVNRVQAQVKKSLVLCYVEVPPPHTQPPPTDATGEGGELD 418
Query: 211 --SCLEQYAVEERTISRWSPEQCRE 233
+ L Y V E TI RW P + R+
Sbjct: 419 IGTLLRTYKVREMTIKRWVPNRSRD 443
>gi|170104860|ref|XP_001883643.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164641278|gb|EDR05539.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 398
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 35/193 (18%)
Query: 76 QLGMEEGFYLCHSLKCLKIVGEDNSTKND-DELWQYMKAK------------------KE 116
QL ++E F L +L CL ++ + T ++W +
Sbjct: 206 QLTLQEAFLLLWNLDCLTVLDPQSMTPMSLKQIWIAFQVAHLPPRLPSQPTQKPQLQYDN 265
Query: 117 TFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLR 176
F + + Y H R WVV+ G ++ VD++ Y+ P H+E+A++V+ ED E+ ++
Sbjct: 266 PFLINFVVYHHYRSLGWVVKGGIKFCVDYLLYKRGPVFHHAEFALVVIPVYEDPEDQQVS 325
Query: 177 V----------WSDIHCTVRLCGGVAKTLLILTINKNGQG------TATPSCLEQYAVEE 220
V WS + R+ V KTL+++ + + +P+CL Y+V E
Sbjct: 326 VTNLQNASPFAWSWLSTINRVNSQVQKTLILVYVTIPARSRLPESILESPACLAHYSVRE 385
Query: 221 RTISRWSPEQCRE 233
+ R+ P + R+
Sbjct: 386 VILRRFIPARMRD 398
>gi|240277727|gb|EER41235.1| tRNA-splicing endonuclease subunit SEN2 [Ajellomyces capsulatus
H143]
gi|325093811|gb|EGC47121.1| tRNA-splicing endonuclease subunit SEN2 [Ajellomyces capsulatus
H88]
Length = 497
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 84/199 (42%), Gaps = 41/199 (20%)
Query: 76 QLGMEEGFYLCHSLKCLKIVGEDNST----KNDDELWQ---YMKAKKETFP--------L 120
QL EE F+L + L L++ D ++ + L++ Y ++ + P L
Sbjct: 299 QLSNEEAFFLVYCLGVLQVYDNDRTSILPATSLLSLFRRHSYFPPREPSVPAKPDDPFLL 358
Query: 121 LYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDG---------- 170
Y Y H R WV+RSG ++GVD++ Y P H+E+AV +L D
Sbjct: 359 SYVVYHHFRSLGWVIRSGVKFGVDYLLYNRGPVFSHAEFAVCLLPAYSDPYWIATAEKRQ 418
Query: 171 --ENGRLRVWSDIHCTVRLCGGVAKTLLILTIN------------KNGQGTATP--SCLE 214
R W +HC R+ V K+L++ + NG+ + L+
Sbjct: 419 KTAKKEGRTWWWLHCVNRVQAQVKKSLVLCYVEVPPPPPKPQPTGANGENDELDIGALLK 478
Query: 215 QYAVEERTISRWSPEQCRE 233
Y V E TI RW P + R+
Sbjct: 479 TYKVREMTIKRWVPNRSRD 497
>gi|296425161|ref|XP_002842111.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638370|emb|CAZ86302.1| unnamed protein product [Tuber melanosporum]
Length = 399
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 34/200 (17%)
Query: 58 RACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTK-NDDELWQYMKA--- 113
R R + E D + QL +EE F+L L L++ D + K + ++ + +
Sbjct: 196 RRSLERPVADVE-DIEHLQLTLEEAFFLSFGLGVLELTDADTNKKISQKDMLRLFRGHAC 254
Query: 114 -----------KKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVL 162
+ F L Y Y H R WVV+ G ++ VD++ Y P H+E+ VL
Sbjct: 255 FPPRDPQSSFEPDDPFMLSYVVYHHFRSLGWVVKPGVKFAVDYLLYNRGPVFSHAEFGVL 314
Query: 163 VLA---------EGEDGENGRLRVWSDIHCTVRLCGGVAKTLLIL------TINKNGQ-G 206
+L + E LR W +H R+ V KT++++ ++ +G+ G
Sbjct: 315 ILPAYSHTHWANDKSRKEGKELRPWHWLHSINRVSSQVKKTVVLVFVEVPPPLDDDGKIG 374
Query: 207 TATPSCLEQYAVEERTISRW 226
A L +Y+V E + RW
Sbjct: 375 VA--DLLARYSVREVALRRW 392
>gi|121718203|ref|XP_001276131.1| tRNA-splicing endonuclease subunit Sen2, putative [Aspergillus
clavatus NRRL 1]
gi|119404329|gb|EAW14705.1| tRNA-splicing endonuclease subunit Sen2, putative [Aspergillus
clavatus NRRL 1]
Length = 487
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 89/211 (42%), Gaps = 43/211 (20%)
Query: 62 GRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDN-------------------STK 102
+ + + K+++ QL EE F+L ++L L + + + ++
Sbjct: 281 AKQVDSTLKNEEHLQLSNEEAFFLAYALGVLHVFDDGHKAVVPPTALLPLFCHTSYYPSR 340
Query: 103 NDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVL 162
+ + Q + F + Y Y H R WVVRSG ++GVD++ Y P H+E+AV+
Sbjct: 341 SSSMILQ----PDDPFLVSYVVYHHFRSLGWVVRSGVKFGVDYLLYNRGPVFSHAEFAVV 396
Query: 163 VLAEGEDG------------ENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGT--- 207
V+ E E+ + R W +HC R+ V K+L++ + +
Sbjct: 397 VIPAYEHTYWSETLERRAYCESKQARSWWWLHCVNRVQAQVKKSLVVCYVEVPSPASHEL 456
Query: 208 -----ATPSCLEQYAVEERTISRWSPEQCRE 233
+ L +Y V E + RW P + R+
Sbjct: 457 EQDSEDIGALLSRYKVREMLLRRWVPNRTRD 487
>gi|367037957|ref|XP_003649359.1| hypothetical protein THITE_2107870 [Thielavia terrestris NRRL 8126]
gi|346996620|gb|AEO63023.1| hypothetical protein THITE_2107870 [Thielavia terrestris NRRL 8126]
Length = 677
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 83/189 (43%), Gaps = 33/189 (17%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDE-LWQYMKA--------------K 114
++K+ +QL EE F+L SL L++V S+ E L +A
Sbjct: 486 ENKEHFQLAPEEAFFLVFSLGALRVVDPVTSSPISTEHLLSLFRAYSHFPPRPLGSCLGP 545
Query: 115 KETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGE--- 171
+ F + Y Y H R WV R G ++GVD++ Y+ P HSE+ ++V+ D
Sbjct: 546 DDPFLVNYAVYHHFRSLGWVPRHGIKFGVDWILYQRGPVFDHSEFGIMVMPTFSDPSWED 605
Query: 172 ---NGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQ----------GTATPSCLEQYAV 218
N R WS + R+ V K+L+++ ++ G A + L++Y +
Sbjct: 606 HEHNAPRRSWSWLMGVNRVLSHVLKSLVLVYVDIPSPPVFDEQMRRGGIA--AALKKYTI 663
Query: 219 EERTISRWS 227
E + R+S
Sbjct: 664 REIMVRRFS 672
>gi|403413664|emb|CCM00364.1| predicted protein [Fibroporia radiculosa]
Length = 387
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 82/189 (43%), Gaps = 25/189 (13%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKND-DELWQYMKAKKETFPL-------L 121
D + QL ++E F+L +L CL I+ S E+W + ++ P+ L
Sbjct: 199 PDLEHLQLTLQEAFFLLWNLNCLTIINSATSEPMTLQEIWAAFQGTPDSTPISVPLHVQL 258
Query: 122 YK-----------AYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDG 170
YK Y H R W+++ G ++ VD + Y+ P H+E+AV+VL ED
Sbjct: 259 YKRFDNPFLVNYAVYHHYRSLGWIIKGGIKFCVDLLLYKRGPVFHHAEFAVIVLPVYEDP 318
Query: 171 ENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQ------GTATPSCLEQYAVEERTIS 224
+ + + ++ TL++ + Q +P+CL Y+V + +
Sbjct: 319 ADQENSPFDLANAEPFSWSWLSTTLILAYVTIPAQSRISPNALTSPACLAHYSVRDIVLR 378
Query: 225 RWSPEQCRE 233
R+ P + R+
Sbjct: 379 RFIPARMRD 387
>gi|340519160|gb|EGR49399.1| hypothetical protein TRIREDRAFT_60255 [Trichoderma reesei QM6a]
Length = 541
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 85/192 (44%), Gaps = 30/192 (15%)
Query: 71 DKQWYQLGMEEGFYLCHSLKCLKIV----GEDNSTKNDDELWQ---YMKAKK-------- 115
+K+ QL EE F+L L L++ G S ++ L++ Y +
Sbjct: 350 NKEHLQLMPEEAFFLSFGLGVLEVTDPASGRVLSRQDLFRLFRQYSYFPPRNGPDEPDLE 409
Query: 116 --ETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGED---- 169
+ F L Y Y H R WV R+G ++GVD++ Y P H+E+ ++V+ D
Sbjct: 410 PDDGFLLHYAVYHHFRSLGWVPRAGIKFGVDWLLYARGPVFDHAEFGLIVIPSYSDEWWK 469
Query: 170 --GENGRLRVWSDIHCTVRLCGGVAKTLLILTIN-------KNGQGTATPSCLEQYAVEE 220
G+ G + WS +H VR+ V K+L+++ ++ T ++ Y V E
Sbjct: 470 KQGKQGPRKPWSWLHSVVRVLSHVTKSLVLVYVDVPPPHKFDEALKTGAAEAMKLYKVRE 529
Query: 221 RTISRWSPEQCR 232
+ RWS + R
Sbjct: 530 VMVKRWSSNRNR 541
>gi|336269683|ref|XP_003349602.1| hypothetical protein SMAC_03190 [Sordaria macrospora k-hell]
gi|380093323|emb|CCC08981.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 608
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 70/143 (48%), Gaps = 22/143 (15%)
Query: 43 SALLAVEAEQTELLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTK 102
SAL AVE + A + +V DK+ +QL EE F+L L L++V D TK
Sbjct: 395 SALPAVEKPVISDVVPAVYSEELV----DKEHFQLAPEEAFFLAFGLGALRVV--DPVTK 448
Query: 103 ---NDDELWQYMKA-------------KKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFV 146
++++L ++A ++ F + Y AY H R WV R G ++GVD++
Sbjct: 449 APISNEQLLANLRANSYFPPRSVDNLSPEDPFLVQYAAYHHFRSFGWVPRHGIKFGVDWI 508
Query: 147 AYRHHPSLVHSEYAVLVLAEGED 169
Y+ P HSE+ ++V+ D
Sbjct: 509 IYQRGPVFDHSEFGIMVVPSFSD 531
>gi|403270496|ref|XP_003927213.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2 [Saimiri
boliviensis boliviensis]
Length = 458
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 80/170 (47%), Gaps = 18/170 (10%)
Query: 73 QWYQLGMEEGFY--LCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRK 130
++ QL +EE + + S + L IV ++W+ + TF Y AY + R
Sbjct: 295 EYLQLSLEEVCFQHVIISAEPLTIV----------KIWKAFTVVQPTFRTTYMAYHYFRS 344
Query: 131 KNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLC 188
K WV + G +YG D + YR P H+ Y+V++ + + +G R W + R+
Sbjct: 345 KGWVPKVGLKYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGSLRRPFSWKSLAALSRVS 404
Query: 189 GGVAKTLLILTINKNGQGT----ATPSCLEQYAVEERTISRWSPEQCRED 234
V+K L++ + K T +P C+++ V+E +SRW + R D
Sbjct: 405 VNVSKELMLCYLIKPSTMTDKEMESPECMKRIKVQEVILSRWVSSRERSD 454
>gi|307212765|gb|EFN88436.1| tRNA-splicing endonuclease subunit Sen2 [Harpegnathos saltator]
Length = 424
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Query: 77 LGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVR 136
L EE F+L L CL++V D S + + W Y +K F Y Y + R K W+V+
Sbjct: 267 LTFEETFFLMFGLGCLQVVHFDGSLIDINNAWLYFCKEKTDFLQKYVVYHYYRSKGWIVK 326
Query: 137 SGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGED------GENGRLRVWSDIHCTVRLCGG 190
SG +YG DF+ Y+ P H+ Y V+V D + R W+ + RL
Sbjct: 327 SGIKYGGDFLIYKEGPPFYHASYIVIVEVVDADSLIVDSATSSRSVTWNSLFGLERLSET 386
Query: 191 VAKT 194
AK
Sbjct: 387 AAKV 390
>gi|302667778|ref|XP_003025469.1| hypothetical protein TRV_00338 [Trichophyton verrucosum HKI 0517]
gi|291189580|gb|EFE44858.1| hypothetical protein TRV_00338 [Trichophyton verrucosum HKI 0517]
Length = 432
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 83/198 (41%), Gaps = 34/198 (17%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFP---------- 119
+D++ QL E+ F+L + L L++ + ST + + + FP
Sbjct: 235 EDEEHLQLSSEDAFFLSYGLGVLEVYDDTRSTVLKPQALLALLRQHSYFPPRAPSAAPEP 294
Query: 120 -----LLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEG-----ED 169
+ Y AY H R WVVRSG ++GVD + Y P H+E+AV +L ++
Sbjct: 295 DDRFMISYVAYHHFRSLGWVVRSGVKFGVDLLLYNKGPVFSHAEFAVNLLPSYSHPYWKE 354
Query: 170 GENGRLRV-------WSDIHCTVRLCGGVAKTLLILTINKNGQGTATPS-------CLEQ 215
E R V W +HC R+ V K+ ++ + T + L+
Sbjct: 355 TEERREYVAAKLNHTWWWLHCVNRVQAQVKKSFVMCFVEIPPPATGSKPDEQDIGELLKT 414
Query: 216 YAVEERTISRWSPEQCRE 233
Y V E + RW P + R+
Sbjct: 415 YQVRELAVKRWVPNRSRD 432
>gi|119498751|ref|XP_001266133.1| tRNA-splicing endonuclease subunit Sen2, putative [Neosartorya
fischeri NRRL 181]
gi|119414297|gb|EAW24236.1| tRNA-splicing endonuclease subunit Sen2, putative [Neosartorya
fischeri NRRL 181]
Length = 484
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 106/263 (40%), Gaps = 45/263 (17%)
Query: 6 KGRASEAKSSGRSHVQNHLRFTFLSIQSEAHAVLAGYSALLAVEAEQTELLNRACFGRHI 65
KG AS S G+ +RF+ + + E A SA+L + TE + +
Sbjct: 232 KGPAS--PSPGQESPSKAVRFSPVVQEKE----FASDSAILRLPGPVTEAQETSQEELPL 285
Query: 66 VTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELW-------QYMKAKK--- 115
K+++ QL EE F+L + L L + T Y +
Sbjct: 286 ----KNEEHLQLSNEEAFFLAYGLGVLHVYDHQQKTIIPHTSLLSLFCHNSYYPPRDPST 341
Query: 116 -----ETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVL------ 164
+ F + Y Y H R WVVRSG ++GVD++ Y P H+E+AV+V+
Sbjct: 342 DLNPDDPFMISYIVYHHFRSLGWVVRSGVKFGVDYLLYNRGPVFSHAEFAVVVIPAYEHS 401
Query: 165 --AEGEDGENG----RLRVWSDIHCTVRLCGGVAKTLLILTI--------NKNGQGTATP 210
+E D + + R W +HC R+ V K+L++ + +
Sbjct: 402 YWSETSDRRSSCATKQARSWWWLHCVNRVQAQVKKSLVVCYVEVPPPRSHDSKNHSEDIG 461
Query: 211 SCLEQYAVEERTISRWSPEQCRE 233
+ L +Y V E I RW P + R+
Sbjct: 462 ALLSRYRVREMLIRRWVPNRTRD 484
>gi|195484017|ref|XP_002090528.1| GE12758 [Drosophila yakuba]
gi|194176629|gb|EDW90240.1| GE12758 [Drosophila yakuba]
Length = 233
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 97/209 (46%), Gaps = 25/209 (11%)
Query: 25 RFTFLSIQSEAHAVLAGYSALLAVEAEQTE-LLNRACFG-----RHIVTAEKDKQWYQLG 78
RFT LS++ V+ EQ + L + CFG R + + + LG
Sbjct: 34 RFTGLSVE--------------IVDPEQAKSLYDNGCFGKGSKSRGAPESGDEDETLLLG 79
Query: 79 MEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSG 138
MEE +L H L L I + + + + + F +Y +L+ KNWV++SG
Sbjct: 80 MEESCFLAHYLNVLDITNSAGCFMDFHRFVEVAEEQNDKFLENLASYVYLKSKNWVIKSG 139
Query: 139 SQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLIL 198
++G DF+ Y+ P L H+ + V+V G D ++ + + + R+ K +L+L
Sbjct: 140 IKFGGDFLIYKQSPRLYHASFLVIVQKPG-DSDHYQSKNLKGVQ---RVAETSDKDVLLL 195
Query: 199 TINKNGQGTATPSCLEQYAVEERTISRWS 227
T+ + + + P L++ +V E + R++
Sbjct: 196 TV-QAPKDISCPRDLQEASVTETIVRRFN 223
>gi|315048679|ref|XP_003173714.1| tRNA-splicing endonuclease subunit SEN2 [Arthroderma gypseum CBS
118893]
gi|311341681|gb|EFR00884.1| tRNA-splicing endonuclease subunit SEN2 [Arthroderma gypseum CBS
118893]
Length = 432
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 36/199 (18%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFP---------- 119
+D++ QL E+ F+L + L L++ + ST + + + FP
Sbjct: 235 EDEEHLQLSSEDAFFLSYGLGVLEVYDDTRSTILQPQSLLALLRQHSYFPPRDPSAVPEP 294
Query: 120 -----LLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEG-----ED 169
+ Y AY H R WVVRSG ++GVD + Y P H+E+AV +L ++
Sbjct: 295 DDRFMISYVAYHHFRSLGWVVRSGVKFGVDLLLYNKGPVFSHAEFAVNLLPSYSHPYWKE 354
Query: 170 GENGRLRV-------WSDIHCTVRLCGGVAKTLLILTI--------NKNGQGTATPSCLE 214
E R V W +HC R+ V K+ ++ + +K+G+ L+
Sbjct: 355 TEERRKYVAAKLNHTWWWLHCVNRVQAQVKKSFVMCFVEIPPPSADDKSGEQDIG-ELLK 413
Query: 215 QYAVEERTISRWSPEQCRE 233
Y V E I RW P + R+
Sbjct: 414 SYQVRELAIKRWVPNRSRD 432
>gi|241954386|ref|XP_002419914.1| tRNA-splicing endonuclease subunit, putative [Candida dubliniensis
CD36]
gi|223643255|emb|CAX42129.1| tRNA-splicing endonuclease subunit, putative [Candida dubliniensis
CD36]
Length = 389
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 77/186 (41%), Gaps = 34/186 (18%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQ--------YMKAKKETFPLLYKA 124
++ QL E F+L +L+ + IV D+ D ++ + F + Y A
Sbjct: 213 EFLQLQEVEAFFLKFALQRVDIVNVDSLL---DLFYKCCSHHSFSAIPTSNNQFVIEYIA 269
Query: 125 YSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCT 184
Y + R W VRSG ++G DF+ Y+ P H+E+ VLV+ + + W I
Sbjct: 270 YHYFRTNGWCVRSGIKFGTDFLLYKRGPPFTHAEFCVLVMTKDSKYD------WFQIAAK 323
Query: 185 VRLCGGVAKTLLILTINKNGQ-----------------GTATPSCLEQYAVEERTISRWS 227
R+ G V KT ++ I+ Q G L +Y + E RW+
Sbjct: 324 ARVIGSVKKTFVLCYIDYPTQEEFDHILQKQHEKDIDHGLLLKELLNKYKISEVIYKRWN 383
Query: 228 PEQCRE 233
P + R+
Sbjct: 384 PSRTRD 389
>gi|115432988|ref|XP_001216631.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114189483|gb|EAU31183.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1965
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 83/192 (43%), Gaps = 34/192 (17%)
Query: 68 AEKDKQWYQLGMEEGFYLCHSLKCLKIVG-EDNSTKNDDELWQYM-------------KA 113
A K+++ QL EE F+L + L L+I + NS + L Q
Sbjct: 286 ALKNEEHLQLSNEEAFFLVYGLGALQIYDRQTNSPFSSSSLLQLFCQHSSYPPRATADLK 345
Query: 114 KKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVL--------A 165
+TF + Y Y H R WVVRSG ++GVD++ Y P H+E+AV+++ +
Sbjct: 346 TDDTFLVSYVVYHHFRSLGWVVRSGVKFGVDYLLYNRGPVFSHAEFAVVIIPSYDHPYWS 405
Query: 166 EGEDG----ENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGTATP--------SCL 213
E E+ + + R W HC R+ V KTL++ + A P + L
Sbjct: 406 ETEERIAYCASKQARSWWWFHCVNRVQAQVRKTLVVCYVEIPPPTIANPDVSKSDIGALL 465
Query: 214 EQYAVEERTISR 225
Y V E I R
Sbjct: 466 GHYKVREMAIRR 477
>gi|340711140|ref|XP_003394138.1| PREDICTED: LOW QUALITY PROTEIN: tRNA-splicing endonuclease subunit
Sen2-like [Bombus terrestris]
Length = 450
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 13/165 (7%)
Query: 77 LGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVR 136
L EE F+L + L CL ++ D + + D W + F Y Y + R K WVV+
Sbjct: 275 LTFEETFFLLYGLGCLNLIDFDGNLLDIDSAWHIFCKTDKNFISKYVVYHYFRSKGWVVK 334
Query: 137 SGSQYGVDFVAYRHHPSLVHSEYAVLV-------LAEGEDGENGRLRVWSDIHCTVRLCG 189
G +YG DF+ Y+ P H+ Y V++ L +D +L W+ + RL
Sbjct: 335 PGLKYGGDFLLYKQGPPFYHASYIVIIDTLDSDTLITDQDKCMHKL-TWNSLLGLERLSE 393
Query: 190 GVAKTLLILTINKNGQGTATPSCLE-----QYAVEERTISRWSPE 229
AK +L + T + L +++V E RW+P+
Sbjct: 394 TAAKEILFAQVLWPSSALQTSNSLNVDMLPEFSVRELLWRRWNPK 438
>gi|242216843|ref|XP_002474226.1| predicted protein [Postia placenta Mad-698-R]
gi|220726644|gb|EED80587.1| predicted protein [Postia placenta Mad-698-R]
Length = 387
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 38/196 (19%)
Query: 76 QLGMEEGFYLCHSLKCLKIVGEDNSTKND-DELWQYMKAKKET----------------- 117
QL ++E F+L +L CL ++ S ++W ++ + T
Sbjct: 192 QLTLQEAFFLMWTLDCLTVLDPATSAPMSLRDVWTAFRSVQCTPQIPIPGTLDLDLYAGR 251
Query: 118 ----FPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDG--- 170
F + Y AY + R WV++ G ++ VD + Y+ P H+E+AV+VL ED
Sbjct: 252 FDNPFLVHYAAYHYYRSLGWVIKGGIKFCVDLLLYKRGPVFHHAEFAVVVLPVYEDPADQ 311
Query: 171 -------ENGRLRVWSDIHCTVRLCGGVAKTLLI--LTINKNGQGT----ATPSCLEQYA 217
N W+ + R+ V KTL++ +TI + + ++P+CL Y+
Sbjct: 312 ESSPFDLANASPFSWTWLSTVNRVNSQVQKTLILTYVTIPARSRMSPDLLSSPACLAHYS 371
Query: 218 VEERTISRWSPEQCRE 233
V E + R+ P + R+
Sbjct: 372 VREVVLRRFIPARMRD 387
>gi|70984874|ref|XP_747943.1| tRNA-splicing endonuclease subunit Sen2 [Aspergillus fumigatus
Af293]
gi|66845571|gb|EAL85905.1| tRNA-splicing endonuclease subunit Sen2, putative [Aspergillus
fumigatus Af293]
gi|159126132|gb|EDP51248.1| tRNA-splicing endonuclease subunit Sen2, putative [Aspergillus
fumigatus A1163]
Length = 484
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 81/200 (40%), Gaps = 37/200 (18%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKIVGED----------------NSTKNDDELWQYMKA 113
K+++ QL EE F+L + L L + NS + +K
Sbjct: 286 KNEEHLQLSNEEAFFLAYGLGVLHVYDHQQKTIIPHTSLLSLFCHNSYYPPRDPSTDLKP 345
Query: 114 KKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDG--- 170
+ F + Y Y H R WVVRSG ++GVD++ Y P H+E+AV+V+ E
Sbjct: 346 D-DPFMISYIVYHHFRSLGWVVRSGVKFGVDYLLYNRGPVFSHAEFAVVVIPAYEHSYWS 404
Query: 171 ---------ENGRLRVWSDIHCTVRLCGGVAKTLLILTI--------NKNGQGTATPSCL 213
+ R W +HC R+ V K+L++ + + + L
Sbjct: 405 ETSDRRSYCATKQARSWWWLHCVNRVQAQVKKSLVVCYVEVPPPRSHDSKTHSEDIGALL 464
Query: 214 EQYAVEERTISRWSPEQCRE 233
+Y V E I RW P + R+
Sbjct: 465 SRYRVREMLIRRWVPNRTRD 484
>gi|302505433|ref|XP_003014423.1| hypothetical protein ARB_06985 [Arthroderma benhamiae CBS 112371]
gi|291178244|gb|EFE34034.1| hypothetical protein ARB_06985 [Arthroderma benhamiae CBS 112371]
Length = 431
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 82/199 (41%), Gaps = 34/199 (17%)
Query: 69 EKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFP--------- 119
E D++ QL E+ F+L + L L + + ST + + + FP
Sbjct: 233 EVDEEHLQLSSEDAFFLSYGLGVLDVYDDTRSTVLKPQALLALLRQHSYFPPRAPSAAPE 292
Query: 120 ------LLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEG-----E 168
+ Y AY H R WVVRSG ++GVD + Y P H+E+AV +L +
Sbjct: 293 PDDRFMISYIAYHHFRSLGWVVRSGVKFGVDLLLYNKGPVFSHAEFAVNLLPSYSHPYWK 352
Query: 169 DGENGRLRV-------WSDIHCTVRLCGGVAKTLLILTINKNGQGTATPS-------CLE 214
+ E R V W +HC R+ V K+ ++ + T + L+
Sbjct: 353 ETEERREYVAAKLNHTWWWLHCVNRVQAQVKKSFVMCFVEIPPPTTGSKPDEQDIGELLK 412
Query: 215 QYAVEERTISRWSPEQCRE 233
Y V E + RW P + R+
Sbjct: 413 TYQVRELAVKRWVPNRSRD 431
>gi|345568657|gb|EGX51550.1| hypothetical protein AOL_s00054g249 [Arthrobotrys oligospora ATCC
24927]
Length = 485
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 37/198 (18%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTK-NDDELWQYMKAKKETFPLL------- 121
++++ QL + E F+L ++L L + D+ + E+++ + FP L
Sbjct: 291 QNQEHLQLMLSEAFFLAYALGVLSVTTADSPKPLSLPEIFKLF-LRHSIFPPLPESSISL 349
Query: 122 ------------YKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLA---- 165
Y Y H R WVV+SG ++ VD++ Y+ P H+E+A+L++
Sbjct: 350 TNFNPDNSFLINYVVYHHFRSLGWVVKSGVKFSVDYLLYKRGPVFSHAEFAILIIPSYSR 409
Query: 166 -EGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTINK---------NGQGTATPSCLEQ 215
EG++ GR W +H R+ V KT++++ ++ + + + L +
Sbjct: 410 WEGKEENVGREWYW--LHSITRVNSQVKKTVVLVYVDVPTADEVKGWDCETDGLKTVLGK 467
Query: 216 YAVEERTISRWSPEQCRE 233
Y + E + RW P + RE
Sbjct: 468 YRIREVALRRWIPGRNRE 485
>gi|154285530|ref|XP_001543560.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150407201|gb|EDN02742.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 383
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 79/199 (39%), Gaps = 41/199 (20%)
Query: 76 QLGMEEGFYLCHSLKCLKIVGED-------NSTKNDDELWQYMKAKKETFP--------L 120
QL EE F+L + L L++ D S + Y ++ + P L
Sbjct: 185 QLSNEEAFFLVYCLGVLQVYDNDRISILPATSLLSLFRRHSYFPPREPSVPAKPDDPFLL 244
Query: 121 LYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDG---------- 170
Y Y H R W VRSG ++GVD++ Y P H+E+AV +L D
Sbjct: 245 SYVVYHHFRSLGWAVRSGVKFGVDYLLYNRGPVFSHAEFAVCLLPAYSDPYWTATAEKRQ 304
Query: 171 --ENGRLRVWSDIHCTVRLCGGVAKTLLILTIN------------KNGQGTATP--SCLE 214
R W +HC R+ V K+L++ + NG+ + L+
Sbjct: 305 KTAKKEDRTWWWLHCVNRVQAQVKKSLVLCYVEVPPPPPKLQPTGANGENDELDIGALLK 364
Query: 215 QYAVEERTISRWSPEQCRE 233
Y V E TI RW P + R+
Sbjct: 365 TYKVREMTIKRWVPNRSRD 383
>gi|242206491|ref|XP_002469101.1| predicted protein [Postia placenta Mad-698-R]
gi|220731772|gb|EED85613.1| predicted protein [Postia placenta Mad-698-R]
Length = 387
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 86/196 (43%), Gaps = 38/196 (19%)
Query: 76 QLGMEEGFYLCHSLKCLKIVGEDNSTKND-DELWQYMKAKK------------------- 115
QL ++E F+L +L CL ++ S ++W ++ +
Sbjct: 192 QLTLQEAFFLMWTLDCLTVLDPATSAPMSLRDVWTAFRSVQCAPQIPIPGTLELDLYAGR 251
Query: 116 --ETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDG--- 170
F + Y AY + R WV++ G ++ VD + Y+ P H+E+AV+VL ED
Sbjct: 252 FDNPFLVHYAAYHYYRSLGWVIKGGIKFCVDLLLYKRGPVFHHAEFAVVVLPVYEDPADQ 311
Query: 171 -------ENGRLRVWSDIHCTVRLCGGVAKTLLI--LTINKNGQGT----ATPSCLEQYA 217
N W+ + R+ V KTL++ +TI + + ++P+CL Y+
Sbjct: 312 ESSPFDLANASPFSWTWLSTVNRVNSQVQKTLILTYVTIPARSRMSPDLLSSPACLTHYS 371
Query: 218 VEERTISRWSPEQCRE 233
V E + R+ P + R+
Sbjct: 372 VREVVLRRFIPARMRD 387
>gi|198474061|ref|XP_001356545.2| GA16496 [Drosophila pseudoobscura pseudoobscura]
gi|198138231|gb|EAL33609.2| GA16496 [Drosophila pseudoobscura pseudoobscura]
Length = 244
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 96/210 (45%), Gaps = 24/210 (11%)
Query: 36 HAVLAGYSALLAVEAEQTELLNRACFG-----RHIVTAEKDKQWYQLGMEEGFYLCHSLK 90
H VL G S ++ + L N C+G R + + + LG+EE +L + LK
Sbjct: 32 HGVLTGLSVEISDSTQSQSLHNNGCYGKGSKSRGGPASGDEDETLLLGLEESCFLAYYLK 91
Query: 91 CLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRH 150
L+I + ++ + + + + + F Y +L+ KNWV++SG ++G DF+ Y+
Sbjct: 92 VLEIKNQSGTSVDWEGFLKVAQDLNDRFLENLACYLYLKSKNWVIKSGIKFGGDFLIYKQ 151
Query: 151 HPSLVHSEYAVLVLAEGEDGENGRLRVWS--DIHCTVRLCGGVAKTLLILTIN------- 201
P H+ + V+V + L + ++ R+ K +L+LT++
Sbjct: 152 SPRNFHASFLVIVQTHSD------LDYYQPKNLKGVQRVAETSDKDVLLLTVDCRTGLTV 205
Query: 202 ----KNGQGTATPSCLEQYAVEERTISRWS 227
++ ATP L++ +V E + R++
Sbjct: 206 GQPKEDSSHIATPEALKEISVTETIVRRFN 235
>gi|429850919|gb|ELA26148.1| tRNA-splicing endonuclease subunit [Colletotrichum gloeosporioides
Nara gc5]
Length = 728
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 92/220 (41%), Gaps = 40/220 (18%)
Query: 48 VEAEQTELLNRACFGRHIVTAEK------DKQWYQLGMEEGFYLCHSLKCLKIVGEDNST 101
VE++Q N G H+ AE +K+ QL EE F+L L L++V N
Sbjct: 514 VESDQEPQTN----GTHVTQAEATPTEIVNKEHLQLTSEEAFFLTFGLGALRVVNPINKQ 569
Query: 102 K-NDDEL------WQYMKAKKET-------FPLLYKAYSHLRKKNWVVRSGSQYGVDFVA 147
EL + Y ++ T F + Y Y H R WV R+G ++GVD++
Sbjct: 570 PIPTPELLNLFRQYSYFPSRASTDLHPDDSFLVNYAVYHHFRSLGWVPRAGIKFGVDWML 629
Query: 148 YRHHPSLVHSEYAVLVLA-------EGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTI 200
Y P H+E+ ++L + D E R + W +H VR+ V K+L+++ +
Sbjct: 630 YAKGPVFDHAEFGAIILPSYSDQWWKDSDRELPR-KTWHWLHGVVRVLSHVQKSLVLVYV 688
Query: 201 NKNG--------QGTATPSCLEQYAVEERTISRWSPEQCR 232
+ Q + Y + E + RWS + R
Sbjct: 689 DIPPPPQFDEALQKGGPAEIFKLYKIREVMVKRWSSNRNR 728
>gi|358392632|gb|EHK42036.1| hypothetical protein TRIATDRAFT_302330 [Trichoderma atroviride IMI
206040]
Length = 572
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 30/192 (15%)
Query: 71 DKQWYQLGMEEGFYLCHSLKCLKIVGEDNS-TKNDDELWQYMKA---------------- 113
+K+ QL EE F+L L L++ + + EL+ +
Sbjct: 381 NKEHLQLTPEEAFFLSFGLGVLEVCDPASGRVLSRQELFSLFRQYSYFPPRNGPDEPDLE 440
Query: 114 KKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGED---- 169
+ F + Y Y H R WV R G ++GVD++ Y P H+E+ ++V+ D
Sbjct: 441 PDDGFLVHYAVYHHFRSLGWVPRGGIKFGVDWLLYTRGPVFDHAEFGLIVIPSYSDAWWK 500
Query: 170 --GENGRLRVWSDIHCTVRLCGGVAKTLLILTIN-------KNGQGTATPSCLEQYAVEE 220
G+ G + WS +H VR+ V K+L+++ ++ + G ++ Y + E
Sbjct: 501 KQGKKGPRKPWSWLHSVVRVLSHVTKSLVLIYVDVPPPHKFEEGLKKGITEAMKLYKIRE 560
Query: 221 RTISRWSPEQCR 232
+ RWS + R
Sbjct: 561 VMVKRWSSNRNR 572
>gi|393222075|gb|EJD07559.1| hypothetical protein FOMMEDRAFT_130716 [Fomitiporia mediterranea
MF3/22]
Length = 417
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 86/199 (43%), Gaps = 35/199 (17%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKIVGEDN-STKNDDELWQYMKAK-------------- 114
KD + QL ++E F+L ++ CL I S+ N ++W+ +A
Sbjct: 219 KDMEHLQLTLQEAFFLIWTMDCLTIADPSTGSSLNLQQIWRAFQAIYYPSFFVSRSLDAF 278
Query: 115 ----KETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDG 170
F + Y + H R WV+++G ++ VD++ Y+ P H++++++V ED
Sbjct: 279 LSRFDNPFLIHYVVFHHYRSLGWVLKNGIKFCVDYMLYKRGPVFSHADFSLVVCPVYEDP 338
Query: 171 ----------ENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQG------TATPSCLE 214
+N WS + R+ V KT ++ + ++P+CLE
Sbjct: 339 SDREGSPFDLQNVGPFTWSWLSTINRVNSQVQKTPVLTYVTIPAMSRLPSDILSSPACLE 398
Query: 215 QYAVEERTISRWSPEQCRE 233
Y + E + R+ P + R+
Sbjct: 399 HYTIREIVVRRFIPARMRD 417
>gi|150951249|ref|XP_001387539.2| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|149388438|gb|EAZ63516.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 383
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 40/205 (19%)
Query: 51 EQTELLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQY 110
E +L+ GR++ ++ QL E F+L ++ +++ D STK +
Sbjct: 197 EDLDLIESNQLGRNL-------EFLQLQAIETFFLKFAVNVIRV--NDFSTKQ-----LF 242
Query: 111 MKAKKET--------FPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVL 162
++ +++ F L Y Y H R W VRSG ++G D + Y+ P +H+EY +L
Sbjct: 243 LECCRQSGILKPTNKFVLDYVVYHHYRSLGWCVRSGVKFGCDMLLYKRGPPFIHAEYCIL 302
Query: 163 VLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTINK--------------NGQGTA 208
V++ + W ++ R+ G V KT +++ ++ + +G
Sbjct: 303 VISNDDKARYD----WFEMAAKARVIGTVKKTFVLVYVDSPTEERFNSILSSAYSDEGIL 358
Query: 209 TPSCLEQYAVEERTISRWSPEQCRE 233
+ Y V E RW+P + R+
Sbjct: 359 FQDLFKLYKVTEILYRRWAPSKTRD 383
>gi|358382352|gb|EHK20024.1| hypothetical protein TRIVIDRAFT_181313 [Trichoderma virens Gv29-8]
Length = 598
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 38/196 (19%)
Query: 71 DKQWYQLGMEEGFYLCHSLKCLKIV----GEDNSTKNDDELWQ---YMKAKK-------- 115
+K+ QL EE F+L L L+I G S ++ L++ Y +
Sbjct: 407 NKEHLQLMPEEAFFLSFGLGVLEITDPASGRVLSRQDLFSLFRQYSYFPPRNGPDEPDLE 466
Query: 116 --ETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGED---- 169
+ F + Y Y H R WV R+G ++GVD++ Y P H+E+ ++V+ D
Sbjct: 467 PDDGFLVHYAVYHHFRSLGWVPRAGIKFGVDWLLYARGPVFDHAEFGLIVIPSYSDAWWK 526
Query: 170 --GENGRLRVWSDIHCTVRLCGGVAKTLLILTIN-----------KNGQGTATPSCLEQY 216
G+ G + WS +H VR+ V K+L+++ ++ K+G A ++ Y
Sbjct: 527 KEGKQGPRKPWSWLHSVVRVLSHVTKSLVLIYVDVPPPHKFEEALKDGITEA----MKLY 582
Query: 217 AVEERTISRWSPEQCR 232
V E + RWS + R
Sbjct: 583 KVREVMVKRWSSNRNR 598
>gi|398393728|ref|XP_003850323.1| hypothetical protein MYCGRDRAFT_46254 [Zymoseptoria tritici IPO323]
gi|339470201|gb|EGP85299.1| hypothetical protein MYCGRDRAFT_46254 [Zymoseptoria tritici IPO323]
Length = 464
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 36/200 (18%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKA--KKETFP-------- 119
++++ QL EE F+L + L L I +S++ + ++ + TFP
Sbjct: 265 ENQEHLQLTCEEAFFLSYGLGVLVIRTPSDSSRPPFSTSELLRQFDRTSTFPRKPATLDV 324
Query: 120 -------LLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDG-- 170
L Y Y H R WVVR G ++ +D++ Y P H+E+AV+++ D
Sbjct: 325 PPDSQFMLNYVVYHHFRSLGWVVRPGIKFSIDYLLYYRGPVFSHAEFAVMIIPSYSDAYW 384
Query: 171 --ENGR--LRVWSD------IHCTVRLCGGVAKTLLILTINKNGQGTATPS-------CL 213
E GR R+ D +HC R+ V KTL+++ ++ T + L
Sbjct: 385 NTEEGRSKRRIKEDSKDWWWLHCVNRVQSQVLKTLVLVYVDIPPPNEFTGAETLDIGGLL 444
Query: 214 EQYAVEERTISRWSPEQCRE 233
+ Y + E + RW + R+
Sbjct: 445 KGYKIREFVMKRWVANRSRD 464
>gi|213407422|ref|XP_002174482.1| tRNA-splicing endonuclease subunit Sen2 [Schizosaccharomyces
japonicus yFS275]
gi|212002529|gb|EEB08189.1| tRNA-splicing endonuclease subunit Sen2 [Schizosaccharomyces
japonicus yFS275]
Length = 338
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 63/127 (49%), Gaps = 16/127 (12%)
Query: 122 YKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDI 181
+ AY + R+ WVV+ G+++ VDF+ YR P H+E AV+++ D + W ++
Sbjct: 213 FAAYQYFRQLGWVVKMGTKFTVDFLLYRRGPVFTHAELAVVLVPCIGDKQTRNFE-WHEL 271
Query: 182 HCTVRLCGGVAKTLLILTI---------------NKNGQGTATPSCLEQYAVEERTISRW 226
HC R+ V KTLL+ + N Q T + L+ Y+V ++ RW
Sbjct: 272 HCLNRVISQVRKTLLVCYVQCPEQAAFEKVWAKRNSMPQWEWTKAILQSYSVRCVSLRRW 331
Query: 227 SPEQCRE 233
P++ R+
Sbjct: 332 VPQRNRD 338
>gi|157113620|ref|XP_001652026.1| hypothetical protein AaeL_AAEL006508 [Aedes aegypti]
gi|108877672|gb|EAT41897.1| AAEL006508-PA [Aedes aegypti]
Length = 334
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 12/133 (9%)
Query: 77 LGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVR 136
L EE +L LKCL++ + ++++L + F LY AY +++ KNW+++
Sbjct: 159 LLFEESLFLVRELKCLEVRTFEGVVLSEEDLLKRFSKLNSNFLELYVAYHYMKSKNWIIK 218
Query: 137 SGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENG-RLRVWS-------DIHCTVRLC 188
SG ++G DF+ Y+ P H+ Y VLV + NG RL S D R+
Sbjct: 219 SGLKFGGDFILYQKGPQFFHASYIVLV----QPYRNGERLPQCSSHYLDNFDFQGFNRIA 274
Query: 189 GGVAKTLLILTIN 201
AK LLIL ++
Sbjct: 275 ETTAKDLLILEVH 287
>gi|189209984|ref|XP_001941324.1| tRNA-splicing endonuclease subunit SEN2 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187977417|gb|EDU44043.1| tRNA-splicing endonuclease subunit SEN2 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 439
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 77/188 (40%), Gaps = 29/188 (15%)
Query: 71 DKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRK 130
D + QL EE F+L + L L +V + +F L Y + H R
Sbjct: 256 DVEHLQLTPEEAFFLTYVLGVLNVVLRGPPC----HVMHSHITPDNSFLLKYVVFHHFRS 311
Query: 131 KNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVL--------------AEGEDGENGRLR 176
WVVR G ++ VD++ Y P+ H+E+A++++ A G + +
Sbjct: 312 LGWVVRPGIKFAVDYLLYIRGPAFTHAEFAIMIIPSYSAPYWNEQPDGATKPRGADKEQK 371
Query: 177 VWSDIHCTVRLCGGVAKTLLILTI-----------NKNGQGTATPSCLEQYAVEERTISR 225
W H R+ V KTL+++ + +G S L++Y V E R
Sbjct: 372 DWWWFHRVNRVQTQVMKTLMLVYVEVPEPWDTKCMEMDGFKIDVGSVLKKYTVREVVFKR 431
Query: 226 WSPEQCRE 233
WSP + R+
Sbjct: 432 WSPSRNRD 439
>gi|408397699|gb|EKJ76839.1| hypothetical protein FPSE_03025 [Fusarium pseudograminearum CS3096]
Length = 594
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 92/219 (42%), Gaps = 48/219 (21%)
Query: 49 EAEQTELLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIV----GEDNSTKND 104
E +TE++N+ K+ + QL EE F+L L L++ G S+ +
Sbjct: 388 EDGKTEIVNKPVL--------KNMEHLQLMPEEAFFLSFGLGALQVTDPASGSQLSSLDL 439
Query: 105 DELWQ---YMKAKKE----------TFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHH 151
L++ Y + E F + Y Y H R +V R G ++GVD++ Y
Sbjct: 440 LRLFRQHSYFPPRVEAEDPALQPDDNFLIHYAVYHHFRSLGFVPRGGIKFGVDWLLYTRG 499
Query: 152 PSLVHSEYAVLVLAE------GEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQ 205
P H+E+ ++V+ E G+ + W +H TVR+ V K+L+++ ++
Sbjct: 500 PVFDHAEFGLIVIPSYSDALWKESGKQNPQKTWQWLHGTVRVLSHVTKSLVLVYVD---- 555
Query: 206 GTATPSCLEQ------------YAVEERTISRWSPEQCR 232
PS EQ Y V E + RWS + R
Sbjct: 556 -VPPPSKFEQALEKGVAEALKLYKVREVMVKRWSTNRNR 593
>gi|389739281|gb|EIM80475.1| hypothetical protein STEHIDRAFT_68228 [Stereum hirsutum FP-91666
SS1]
Length = 401
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 87/200 (43%), Gaps = 36/200 (18%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKIVGEDN-STKNDDELWQYMKAKKETFPL-------- 120
+D + QL + E F+LC +L CL ++ + ++W ++ PL
Sbjct: 202 EDVEHLQLTLPEAFFLCWALDCLTVLDPKSMEPMTLQDIWIAFQSAHLPLPLGVGSVQGQ 261
Query: 121 -----------LYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGED 169
Y + H R WVV++G ++ VD++ Y+ P H+E+A +++ ED
Sbjct: 262 ETLRPDNPFLINYVFHHHYRSLGWVVKNGIKFCVDYLLYKRGPVFHHAEFAFVLMPVYED 321
Query: 170 GE----------NGRLRVWSDIHCTVRLCGGVAKTLLI--LTINKNGQGT----ATPSCL 213
E N W + R+ V KTL++ +TI + + +P+C
Sbjct: 322 EEDKTSSPFSLPNVEPFTWQWLSTVNRVNSQVQKTLILAYVTIPARKRMSKEVLGSPACF 381
Query: 214 EQYAVEERTISRWSPEQCRE 233
E Y++ E + R+ P + R+
Sbjct: 382 EHYSIREIALRRFIPARMRD 401
>gi|116198811|ref|XP_001225217.1| hypothetical protein CHGG_07561 [Chaetomium globosum CBS 148.51]
gi|88178840|gb|EAQ86308.1| hypothetical protein CHGG_07561 [Chaetomium globosum CBS 148.51]
Length = 710
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 89/192 (46%), Gaps = 29/192 (15%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKIVGEDN----STKNDDELWQ---YMKAK-------- 114
++K+ +QL EE F+L S+ LK+V ST+N L++ Y +
Sbjct: 519 ENKEHFQLAPEEAFFLVFSIGALKVVDPVTRSPISTENLLSLFRSHSYFTPRTAHSRLRP 578
Query: 115 KETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDG---- 170
+ F + Y Y H R WV R G ++GVD++ Y+ P HSE+ ++V+ D
Sbjct: 579 DDPFLINYAVYHHFRSLGWVPRHGIKFGVDWIIYQRGPVFDHSEFGIMVMPAFSDAAWKE 638
Query: 171 -ENGRL-RVWSDIHCTVRLCGGVAKTLLILTINKNG--------QGTATPSCLEQYAVEE 220
++ L R WS + R+ V K+L+++ ++ Q + L++Y + E
Sbjct: 639 HDHEELERSWSWLMGVNRVLSHVLKSLVLVYVDIPPPAVFDGEMQRGGIAAALKKYTIRE 698
Query: 221 RTISRWSPEQCR 232
+ R+S + R
Sbjct: 699 VMVRRFSANRNR 710
>gi|67993595|ref|NP_001018222.1| tRNA-splicing endonuclease subunit catalytic subunit Sen2
(predicted) [Schizosaccharomyces pombe 972h-]
gi|50401620|sp|Q8TFH7.1|SEN2_SCHPO RecName: Full=Probable tRNA-splicing endonuclease subunit sen2;
AltName: Full=tRNA-intron endonuclease sen2
gi|19571750|emb|CAD27500.1| tRNA-splicing endonuclease subunit catalytic subunit Sen2
(predicted) [Schizosaccharomyces pombe]
Length = 380
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 67/125 (53%), Gaps = 16/125 (12%)
Query: 124 AYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHC 183
AY + R++ WVV++G+++ VDF+ Y+ P H+E+A+L++ + + ++ W ++HC
Sbjct: 257 AYFYFRQQGWVVKNGTKFSVDFLLYKKGPVFSHAEFAILLIPCVGNKQKYNMQ-WHEVHC 315
Query: 184 TVRLCGGVAKTLLILTI--------NKNGQGTAT-------PSCLEQYAVEERTISRWSP 228
R+ V K+L++ + NK + A+ S L QY + T+ RW P
Sbjct: 316 LNRVIAQVKKSLILCYVQCPSIEDFNKIWKNQASMNEWDWAESVLRQYLIRCVTLRRWVP 375
Query: 229 EQCRE 233
+ R+
Sbjct: 376 SRNRD 380
>gi|299472200|emb|CBN77170.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 374
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 105 DELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVL 164
+E W+Y ++ FP ++ Y H R +++ V +G +YG +V Y P HS Y V V
Sbjct: 193 EEAWRYCCNRRPDFPAMFAVYRHFRIRSFTVDTGHKYGAHYVLYEGPPDECHSRYCVHVT 252
Query: 165 AEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQG 206
G G++ WS + RL VAK+LL+ + QG
Sbjct: 253 GGGGRGDS-----WSHVKTMTRLMPDVAKSLLVCGVTYRPQG 289
>gi|326428479|gb|EGD74049.1| hypothetical protein PTSG_05742 [Salpingoeca sp. ATCC 50818]
Length = 509
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 62 GRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLL 121
GR I+ A + + QL + E F+L H L CL+I+ E + E W+ + F
Sbjct: 408 GRQIIHATR--EVLQLSLVEAFFLKHGLGCLRILDEAGRDMSTVECWRAFTRVQPQFVQR 465
Query: 122 YKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHS 157
Y Y HLR WV +SG ++ DF+AYR P+ HS
Sbjct: 466 YVVYHHLRSAGWVPKSGLKFAADFLAYRQGPAYYHS 501
>gi|195147570|ref|XP_002014752.1| GL18779 [Drosophila persimilis]
gi|194106705|gb|EDW28748.1| GL18779 [Drosophila persimilis]
Length = 244
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 12/204 (5%)
Query: 36 HAVLAGYSALLAVEAEQTELLNRACFG-----RHIVTAEKDKQWYQLGMEEGFYLCHSLK 90
H VL G S ++ + L + C+G R + + + LG+EE +L + LK
Sbjct: 32 HGVLTGLSVEISDSTQSQSLHDNGCYGKGSKSRGGPASGDEDETLLLGLEESCFLAYYLK 91
Query: 91 CLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRH 150
L+I + ++ + + + + + F Y +L+ KNWV++SG ++G DF+ Y+
Sbjct: 92 VLEIKNQSGTSVDWEGFLKVAQDLNDRFLENLACYLYLKSKNWVIKSGIKFGGDFLIYKQ 151
Query: 151 HPSLVHSEYAVLVLAEGE------DGENGRLRVWSDIHCTVRLCGGVAKTLLILTINK-N 203
P H+ + V+V + G RV V L +T+L + K +
Sbjct: 152 SPRNFHASFLVIVQTHSDLDYYQPKNLKGVQRVAETSDKDVLLLTVDCRTVLTVGQPKED 211
Query: 204 GQGTATPSCLEQYAVEERTISRWS 227
ATP L++ +V E + R++
Sbjct: 212 SSHIATPEALKEISVTETIVRRFN 235
>gi|301115706|ref|XP_002905582.1| hypothetical protein PITG_04879 [Phytophthora infestans T30-4]
gi|262110371|gb|EEY68423.1| hypothetical protein PITG_04879 [Phytophthora infestans T30-4]
Length = 259
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 57/133 (42%), Gaps = 16/133 (12%)
Query: 106 ELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLA 165
ELW+ K+ TF + Y H R+ WV +SG YG FV YR + HSEY V V
Sbjct: 93 ELWERFKSSSVTFARNFIVYQHFRRFGWVPKSGLNYGAHFVLYRGSATDYHSEYIVYVQD 152
Query: 166 EGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTIN--KNGQGTATPSCL--------EQ 215
E E W+ I R+ V KT+L+ T+ G ++ + Q
Sbjct: 153 EDESSS------WNTIQSLTRIAADVKKTVLLCTVTTATTVSGDSSTDLMFGVYNFHDVQ 206
Query: 216 YAVEERTISRWSP 228
Y VE I W P
Sbjct: 207 YTVEGVAIRFWDP 219
>gi|326481338|gb|EGE05348.1| tRNA-splicing endonuclease subunit Sen2 [Trichophyton equinum CBS
127.97]
Length = 458
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 79/192 (41%), Gaps = 34/192 (17%)
Query: 76 QLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFP---------------L 120
QL E+ F+L + L L++ + ST + + + FP +
Sbjct: 267 QLSSEDAFFLSYGLGVLEVYDDTRSTVLKPQALLALLRQHSYFPPRAPSAVPEPDDRFMI 326
Query: 121 LYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEG-----EDGENGRL 175
Y AY H R WVVRSG ++GVD + Y P H+E+AV +L ++ E R
Sbjct: 327 SYVAYHHFRSLGWVVRSGVKFGVDLLLYNRGPVFSHAEFAVNLLPSYSHPYWKETEERRE 386
Query: 176 RV-------WSDIHCTVRLCGGVAKTLLI-------LTINKNGQGTATPSCLEQYAVEER 221
V W +HC R+ V K+ ++ +I+ L+ Y V E
Sbjct: 387 YVAAKLNHTWWWLHCVNRVQAQVKKSFVMCFVEIPPPSIDSKPDEQDIGELLKTYQVREL 446
Query: 222 TISRWSPEQCRE 233
+ RW P + R+
Sbjct: 447 AVKRWVPNRSRD 458
>gi|343198395|gb|AEM05970.1| antitumor protein [Trichinella spiralis]
Length = 146
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 3/124 (2%)
Query: 105 DELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVL 164
+E + Y A F + Y H R++ W+V+ G YGVD+V Y PS VHS++ V+++
Sbjct: 4 NEFFSYCIASAADFVFRFAVYLHFRRRGWIVKPGLNYGVDYVVYPDAPSNVHSQFMVIIV 63
Query: 165 AEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTI-NKNGQ-GTATPSCLEQYAVEERT 222
+G + W D R+ V+K +L+ + N NG T + LEQ V+
Sbjct: 64 PHW-NGFHELPMTWRDAVSASRISSAVSKNVLLCGVKNLNGDFQKLTLADLEQCPVQIVC 122
Query: 223 ISRW 226
+ +W
Sbjct: 123 LKQW 126
>gi|340905222|gb|EGS17590.1| hypothetical protein CTHT_0069270 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 637
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 81/189 (42%), Gaps = 33/189 (17%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMK----------------- 112
++K+ +QL EE F+L SL L +V D +T Q +
Sbjct: 446 ENKEHFQLSPEEAFFLVFSLGALSVV--DRTTGQPIPAKQLLTLFCSHSYFPPRPADSSL 503
Query: 113 AKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGEN 172
A + F + Y Y H R WV R G ++GVD++ Y+ P HSE+ V+V+ D +
Sbjct: 504 APNDPFLIHYAVYHHFRSLGWVPRHGIKFGVDWLIYQRGPVFDHSEFGVIVMPSYSDPQW 563
Query: 173 GR------LRVWSDIHCTVRLCGGVAKTLLILTINKNGQGT--------ATPSCLEQYAV 218
R R W+ + R+ V K+L+++ ++ L++Y++
Sbjct: 564 ERHEHEETKRTWAWLMGVNRVLSHVLKSLVLVYVDVPAPPVFEQAMRSGGISEALKKYSI 623
Query: 219 EERTISRWS 227
E + R+S
Sbjct: 624 REVMVRRFS 632
>gi|302911637|ref|XP_003050535.1| hypothetical protein NECHADRAFT_63731 [Nectria haematococca mpVI
77-13-4]
gi|256731472|gb|EEU44822.1| hypothetical protein NECHADRAFT_63731 [Nectria haematococca mpVI
77-13-4]
Length = 557
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 83/198 (41%), Gaps = 40/198 (20%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTK-NDDEL------WQYMKAKKE------ 116
K+ + QL EE F+L L L + + ++ + EL + Y + E
Sbjct: 365 KNMEHLQLMPEEAFFLSFGLGALTVNDPTSGSRLSSMELLRLFRQYSYFPPRVEPEDPAL 424
Query: 117 ----TFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGED--- 169
F + Y Y H R WV R G ++GVD++ Y P H+E+ ++V+ D
Sbjct: 425 QPDDNFLVHYAVYHHFRSLGWVPRGGIKFGVDWLLYTRGPVFDHAEFGLIVIPSYSDPQW 484
Query: 170 ---GENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGTATPSCLEQ----------- 215
G+ + W +H TVR+ V K+L+++ ++ PS E+
Sbjct: 485 KQVGKQNPQKSWQWLHGTVRVLSHVTKSLVLVYVD-----VPPPSKFEEALDKGIAEAFK 539
Query: 216 -YAVEERTISRWSPEQCR 232
Y V E + RWS + R
Sbjct: 540 MYKVREVMVKRWSSNRNR 557
>gi|326468728|gb|EGD92737.1| tRNA-splicing endonuclease subunit Sen2 [Trichophyton tonsurans CBS
112818]
Length = 432
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 79/192 (41%), Gaps = 34/192 (17%)
Query: 76 QLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFP---------------L 120
QL E+ F+L + L L++ + ST + + + FP +
Sbjct: 241 QLSSEDTFFLSYGLGVLEVYDDTRSTVLKPQALLALLRQHSYFPPRAPSAVPEPDDRFMI 300
Query: 121 LYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEG-----EDGENGRL 175
Y AY H R WVVRSG ++GVD + Y P H+E+AV +L ++ E R
Sbjct: 301 SYVAYHHFRSLGWVVRSGVKFGVDLLLYNRGPVFSHAEFAVNLLPSYSHPYWKETEERRE 360
Query: 176 RV-------WSDIHCTVRLCGGVAKTLLI-------LTINKNGQGTATPSCLEQYAVEER 221
V W +HC R+ V K+ ++ +I+ L+ Y V E
Sbjct: 361 YVAAKLNHTWWWLHCVNRVQAQVKKSFVMCFVEIPPPSIDSKPDEQDIGELLKTYQVREL 420
Query: 222 TISRWSPEQCRE 233
+ RW P + R+
Sbjct: 421 AVKRWVPNRSRD 432
>gi|327300951|ref|XP_003235168.1| tRNA-splicing endonuclease subunit Sen2 [Trichophyton rubrum CBS
118892]
gi|326462520|gb|EGD87973.1| tRNA-splicing endonuclease subunit Sen2 [Trichophyton rubrum CBS
118892]
Length = 432
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 82/198 (41%), Gaps = 34/198 (17%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFP---------- 119
+D++ QL E+ F+L + L L++ + S + + + FP
Sbjct: 235 EDEEHLQLSSEDAFFLSYGLGVLEVYDDTRSAILKPQALLALLRQHSYFPPRAPSAAPEP 294
Query: 120 -----LLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEG-----ED 169
+ Y AY H R WVVRSG ++GVD + Y P H+E+AV +L ++
Sbjct: 295 DDRFIVSYVAYHHFRSLGWVVRSGVKFGVDLLLYNKGPVFSHAEFAVNLLPSYSHPYWKE 354
Query: 170 GENGRLRV-------WSDIHCTVRLCGGVAKTLLILTINKNGQGTATPS-------CLEQ 215
E R V W +HC R+ V K+ ++ + T + L+
Sbjct: 355 TEERREYVAAKLNHTWWWLHCVNRVQAQVKKSFVMCFVEIPPPSTDSKPDEQDIGELLKT 414
Query: 216 YAVEERTISRWSPEQCRE 233
Y V E + RW P + R+
Sbjct: 415 YRVRELAVKRWVPNRSRD 432
>gi|66811308|ref|XP_639362.1| hypothetical protein DDB_G0282855 [Dictyostelium discoideum AX4]
gi|60467996|gb|EAL66007.1| hypothetical protein DDB_G0282855 [Dictyostelium discoideum AX4]
Length = 432
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 43/173 (24%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNST----KNDD--------------ELWQYMKAK 114
++ QL + E FYL +SL CL I+ NS+ K +D E W+ +
Sbjct: 197 EYLQLSLCEAFYLIYSLGCLTILRRPNSSDKIIKTNDIDTNKKTMVKMTIQECWKEFQTI 256
Query: 115 KETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGE--- 171
+ +F Y Y + R W+ RSG +YG D++ Y+ P L+H++Y +++ E
Sbjct: 257 ESSFISKYITYHYFRSLGWIPRSGIKYGCDYILYKLKPDLIHAQYGIIIQNRNEQSTNNN 316
Query: 172 ----------------------NGRLRVWSDIHCTVRLCGGVAKTLLILTINK 202
N ++ W ++ R+ VAK +++ I K
Sbjct: 317 DNNNNNNGEINSNQPLFDESSGNRIIQSWDELSGINRVSESVAKGIIVFNIFK 369
>gi|380492144|emb|CCF34816.1| tRNA intron endonuclease [Colletotrichum higginsianum]
Length = 806
Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 42/217 (19%)
Query: 45 LLAVEAEQTELLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTK-- 102
L VEAE TE + IV +K+ QL EE F+L + L++V D+ TK
Sbjct: 603 LTEVEAESTETI-------EIV----NKEHLQLTSEEAFFLAFGMGALRVV--DHVTKAP 649
Query: 103 -------NDDELWQYMKAKK-------ETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAY 148
N + Y ++K + F + Y Y H R WV R+G ++GVD++ Y
Sbjct: 650 IPTVELFNLFRSYSYFPSRKVEELQPDDGFLVNYAVYHHFRSLGWVPRAGIKFGVDWMLY 709
Query: 149 RHHPSLVHSEYAVLVLAEGED---GENGRL---RVWSDIHCTVRLCGGVAKTLLILTIN- 201
P H+E+ ++L D ++ R + W +H VR+ V K+L+++ ++
Sbjct: 710 ARGPVFDHAEFGAIILPSYSDQWWKDSDRQLPRKTWHWLHGVVRVLSHVQKSLVLVYVDV 769
Query: 202 ------KNGQGTATPSCLEQYAVEERTISRWSPEQCR 232
+ Y + E + RWS + R
Sbjct: 770 PAPPQFDEAMKKGPTEVFKLYKIREVMVKRWSSNRNR 806
>gi|299745366|ref|XP_001831674.2| tRNA-intron endonuclease [Coprinopsis cinerea okayama7#130]
gi|298406554|gb|EAU90207.2| tRNA-intron endonuclease [Coprinopsis cinerea okayama7#130]
Length = 413
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 90/206 (43%), Gaps = 42/206 (20%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDD-----------ELW-QYMKAK--- 114
K+ + QL ++E F+L ++ CL ++ + + + + ++W + +A
Sbjct: 208 KNVEHLQLTLQEAFFLLWNMDCLTVLDPNTAWRLTEKPKQLEPMSLKDIWIAFQRAHLPP 267
Query: 115 -----------KETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV 163
F + Y Y H R WVV+ G ++ VD++ Y+ P H+E+A++V
Sbjct: 268 SFDQPPPPLQFDNPFLINYVVYHHYRSLGWVVKGGIKFCVDYLLYKRGPVFSHAEFALVV 327
Query: 164 LAEGEDG----------ENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGTA----- 208
+ ED +N WS + R+ V KTL+++ + +
Sbjct: 328 MPVYEDEQDQASSMVNLQNSTPFTWSWLSTINRVNSQVQKTLVLVYVTIPSESRISTNVL 387
Query: 209 -TPSCLEQYAVEERTISRWSPEQCRE 233
+P+C + Y++ E + R+ P + R+
Sbjct: 388 NSPACFKHYSIREVVLRRFIPARMRD 413
>gi|46123153|ref|XP_386130.1| hypothetical protein FG05954.1 [Gibberella zeae PH-1]
Length = 594
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 48/219 (21%)
Query: 49 EAEQTELLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIV----GEDNSTKND 104
E +TE++++ K+ + QL EE F+L L L++ G S+ +
Sbjct: 388 EDAKTEIVSKPVL--------KNMEHLQLMPEEAFFLNFGLGALQVTDPASGSQLSSLDL 439
Query: 105 DELWQ---YMKAKKE----------TFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHH 151
L++ Y + E F + Y Y H R +V R G ++GVD++ Y
Sbjct: 440 LRLFRQHSYFPPRVEAEDPALQPDDNFLVHYAVYHHFRSLGFVPRGGIKFGVDWLLYTRG 499
Query: 152 PSLVHSEYAVLVLAE------GEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQ 205
P H+E+ ++V+ E G+ + W +H TVR+ V K+L+++ ++
Sbjct: 500 PVFDHAEFGLIVIPSYSDALWKESGKQNPQKTWQWLHGTVRVLSHVTKSLVLVYVD---- 555
Query: 206 GTATPSCLEQ------------YAVEERTISRWSPEQCR 232
PS LEQ Y V E + RWS + R
Sbjct: 556 -VPPPSKLEQALEKGVAEALKLYKVREVMVKRWSTNRNR 593
>gi|336472800|gb|EGO60960.1| hypothetical protein NEUTE1DRAFT_76608 [Neurospora tetrasperma FGSC
2508]
Length = 634
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 85/187 (45%), Gaps = 32/187 (17%)
Query: 71 DKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTK---NDDELWQYMKA-------------K 114
DK+ +QL EE F+L L L+++ D TK ++++L ++A
Sbjct: 445 DKEHFQLAPEEAFFLAFGLGALRVI--DPVTKAPISNEQLLIKLRANSYFPPRSVDKLSP 502
Query: 115 KETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGR 174
++ F + Y Y H R WV R G ++GVD++ Y+ P HSE+ ++V+ D
Sbjct: 503 EDPFLVQYAVYHHFRSLGWVPRHGIKFGVDWIIYQRGPVFDHSEFGIMVVPSFSDPRWSE 562
Query: 175 L------RVWSDIHCTVRLCGGVAKTLLI--------LTINKNGQGTATPSCLEQYAVEE 220
+ W+ + R+ V K+L++ L ++ + + L+++ + E
Sbjct: 563 FEHEESKKTWAWLMGVNRVLSHVLKSLVLVYVDVPPPLVFDEEMKKGGIAAALKKFTIRE 622
Query: 221 RTISRWS 227
+ R+S
Sbjct: 623 VMVRRFS 629
>gi|350293951|gb|EGZ75036.1| hypothetical protein NEUTE2DRAFT_104316 [Neurospora tetrasperma
FGSC 2509]
Length = 595
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 85/187 (45%), Gaps = 32/187 (17%)
Query: 71 DKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTK---NDDELWQYMKA-------------K 114
DK+ +QL EE F+L L L+++ D TK ++++L ++A
Sbjct: 406 DKEHFQLAPEEAFFLAFGLGALRVI--DPVTKAPISNEQLLIKLRANSYFPPRSVDKLSP 463
Query: 115 KETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGR 174
++ F + Y Y H R WV R G ++GVD++ Y+ P HSE+ ++V+ D
Sbjct: 464 EDPFLVQYAVYHHFRSLGWVPRHGIKFGVDWIIYQRGPVFDHSEFGIMVVPSFSDPRWSE 523
Query: 175 L------RVWSDIHCTVRLCGGVAKTLLI--------LTINKNGQGTATPSCLEQYAVEE 220
+ W+ + R+ V K+L++ L ++ + + L+++ + E
Sbjct: 524 FEHEESKKTWAWLMGVNRVLSHVLKSLVLVYVDVPPPLVFDEEMKKGGIAAALKKFTIRE 583
Query: 221 RTISRWS 227
+ R+S
Sbjct: 584 VMVRRFS 590
>gi|68470956|ref|XP_720485.1| potential tRNA splicing endonuclease subunit [Candida albicans
SC5314]
gi|68471412|ref|XP_720254.1| potential tRNA splicing endonuclease subunit [Candida albicans
SC5314]
gi|46442113|gb|EAL01405.1| potential tRNA splicing endonuclease subunit [Candida albicans
SC5314]
gi|46442355|gb|EAL01645.1| potential tRNA splicing endonuclease subunit [Candida albicans
SC5314]
gi|238881582|gb|EEQ45220.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 389
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 75/186 (40%), Gaps = 34/186 (18%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQ--------YMKAKKETFPLLYKA 124
++ QL E F+L +L+ + IV D+ D ++ + F + Y A
Sbjct: 213 EFLQLQEVETFFLKFALQRIDIVNVDSLL---DLFYKCCSHHSFSPIPTSNNQFIIEYIA 269
Query: 125 YSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCT 184
Y + R W VRSG ++G DF+ Y+ P H+E+ VLV+ + + W I
Sbjct: 270 YHYFRTNGWCVRSGIKFGTDFLLYKRGPPFTHAEFCVLVMTKDSKYD------WFQIAAK 323
Query: 185 VRLCGGVAKTLLILTINKNGQ-----------------GTATPSCLEQYAVEERTISRWS 227
R+ G V K ++ I Q G L +Y + E RW+
Sbjct: 324 ARVIGSVKKAFVLCYIEYPTQEEFDQILQKQNEEDIDHGLLLKELLSKYKISEVIYKRWN 383
Query: 228 PEQCRE 233
P + R+
Sbjct: 384 PSRTRD 389
>gi|195579632|ref|XP_002079665.1| GD24075 [Drosophila simulans]
gi|194191674|gb|EDX05250.1| GD24075 [Drosophila simulans]
Length = 233
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 25/209 (11%)
Query: 25 RFTFLSIQSEAHAVLAGYSALLAVEAEQTELL-NRACFG-----RHIVTAEKDKQWYQLG 78
RFT LS++ V+ EQ + L + CFG R + + + LG
Sbjct: 34 RFTGLSVE--------------IVDPEQAKSLHDNGCFGKGSKSRGGPESGDEDEILLLG 79
Query: 79 MEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSG 138
MEE +L H L L I + + + K + + F +Y +L+ KNWV++SG
Sbjct: 80 MEESCFLAHYLNVLDITNLAGNFMDFHMFVEVAKDQNDKFVENLASYVYLKSKNWVIKSG 139
Query: 139 SQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLIL 198
++G DF+ Y+ P L H+ + V+V G D ++ + + + R+ K +LIL
Sbjct: 140 IKFGGDFLIYKQSPRLYHASFLVIVQRPG-DTDHYQSKNLKGVQ---RVAETSDKDVLIL 195
Query: 199 TINKNGQGTATPSCLEQYAVEERTISRWS 227
T+ + +++ L++ V E + R++
Sbjct: 196 TVQPPKEISSSRD-LKEATVTETIVRRFN 223
>gi|149236648|ref|XP_001524201.1| hypothetical protein LELG_04171 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451736|gb|EDK45992.1| hypothetical protein LELG_04171 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 418
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 84/200 (42%), Gaps = 41/200 (20%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGE-----------------------DNSTKNDDELWQ 109
++ QL E F+L +L + ++G+ D+ T + ++
Sbjct: 221 EYMQLQAVEAFFLKFALDLIAVIGKGEDSLSLRLLFEQCCRLYDVNAVDSFTNSSNDSNS 280
Query: 110 YMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGED 169
+ A + F + Y Y + R K W VRSG ++G DF+ Y+ P H+EY +L++ + E
Sbjct: 281 TIDANNK-FIIHYIVYHYFRSKGWCVRSGIKFGCDFLLYKRGPPFSHAEYCILIMQDNEL 339
Query: 170 GENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQ----------------GTATPSCL 213
+ + W+ + R+ GGV K L+ + + Q G L
Sbjct: 340 SVSF-INDWTQMSGQARVIGGVKKNLVQIYVEPPTQDEFDKIYYHNEKEIDEGLKLKLLL 398
Query: 214 EQYAVEERTISRWSPEQCRE 233
+Y V E RW+P + R+
Sbjct: 399 SKYRVSELLYRRWNPSRTRD 418
>gi|190346919|gb|EDK39107.2| hypothetical protein PGUG_03205 [Meyerozyma guilliermondii ATCC
6260]
Length = 372
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 74/174 (42%), Gaps = 19/174 (10%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL E F+L +L ++ + + + L A +F + Y Y H R
Sbjct: 205 EYLQLQPVEFFFLYFALGVTQLSPPRSFSDTLNTLVPSPSASS-SFLVEYAVYHHYRSLG 263
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVA 192
W VRSG ++G D + Y+ P H+E+A+ + D WSDI R+ GGV
Sbjct: 264 WCVRSGIKFGCDMLLYKRGPPFSHAEFAIKISTTEPDFHYE----WSDISALARVVGGVK 319
Query: 193 KTLLILTI-------------NKNGQGTATPSCLEQYAVEERTISRWSPEQCRE 233
KTL+++ + N N L+ Y + E RW P + R+
Sbjct: 320 KTLVLVYVEVPNDAQFQDQWHNVNSADNFL-QLLKTYKITEILYKRWVPSRTRD 372
>gi|195344556|ref|XP_002038847.1| GM17198 [Drosophila sechellia]
gi|194133977|gb|EDW55493.1| GM17198 [Drosophila sechellia]
Length = 233
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 25/209 (11%)
Query: 25 RFTFLSIQSEAHAVLAGYSALLAVEAEQTELL-NRACFG-----RHIVTAEKDKQWYQLG 78
RFT LS++ V+ EQ + L + CFG R + + + LG
Sbjct: 34 RFTGLSVE--------------IVDPEQAKSLHDNGCFGKGSKSRGGPESGDEDESLLLG 79
Query: 79 MEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSG 138
MEE +L H L L I + + + K + + F +Y +L+ KNWV++SG
Sbjct: 80 MEESCFLAHYLNVLDITNLAGNFMDFHMFVEVAKDQNDKFVENLASYVYLKSKNWVIKSG 139
Query: 139 SQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLIL 198
++G DF+ Y+ P L H+ + V+V G D ++ + + + R+ K +LIL
Sbjct: 140 IKFGGDFLIYKQSPRLYHASFLVIVQRPG-DTDHYQSKNLKGVQ---RVAETSDKDVLIL 195
Query: 199 TINKNGQGTATPSCLEQYAVEERTISRWS 227
T+ + +++ L++ V E + R++
Sbjct: 196 TVQPPKEISSSRD-LKEATVTETIVRRFN 223
>gi|324518220|gb|ADY47038.1| tRNA-splicing endonuclease subunit Sen2 [Ascaris suum]
Length = 365
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 78/161 (48%), Gaps = 19/161 (11%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQ-YMKAKKETFPLLYKAYSHL 128
KD++ +LGMEE YL + L L++ D DD LW+ + +F Y Y L
Sbjct: 208 KDRRL-RLGMEEAMYLMYDLSVLEVSAADKQLSADD-LWRCFYSYAGISFVKRYACYRSL 265
Query: 129 RKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLC 188
R+ WVVR G YGVDF+ Y P HS AV +L E D ++S ++ R
Sbjct: 266 RRLGWVVRPGLPYGVDFMLYCDGPEYHHSSAAVRLLDEHIDAT-----LFSALN---RTL 317
Query: 189 GGVAKTLLILTIN-----KNGQGTATPSCLEQYAVEERTIS 224
+ KTL+ + ++ GQG C+++ VE T++
Sbjct: 318 NNMKKTLVEVRVDIPVGLPLGQGV---KCVQRINVEYLTVA 355
>gi|328874789|gb|EGG23154.1| hypothetical protein DFA_05286 [Dictyostelium fasciculatum]
Length = 395
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 71/170 (41%), Gaps = 41/170 (24%)
Query: 72 KQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKND-------------------------DE 106
+++ QL + E FYL +S CL I+ N + D +E
Sbjct: 144 EEYLQLSLYEAFYLSYSFGCLTILRYPNDNEIDEIEIEEKGEEKEEKLNLRKYVRMTIEE 203
Query: 107 LWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAE 166
W ++F Y Y H R W+VRSG +YG DFV Y+ P L+H++YA++
Sbjct: 204 CWIKFNQYDKSFLYGYIVYHHFRSIGWIVRSGLKYGCDFVLYKLSPELIHAQYAIIAKPT 263
Query: 167 GE---------------DGENGRL-RVWSDIHCTVRLCGGVAKTLLILTI 200
E +G + ++ W + C R+ V+K ++I +
Sbjct: 264 KELLSLLERMGLDTRTMEGLSPKIDETWESLSCMNRVSENVSKGIIICNV 313
>gi|194766355|ref|XP_001965290.1| GF20864 [Drosophila ananassae]
gi|190617900|gb|EDV33424.1| GF20864 [Drosophila ananassae]
Length = 230
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 90/198 (45%), Gaps = 12/198 (6%)
Query: 36 HAVLAGYSALLAVEAEQTELLNRACFGRH------IVTAEKDKQWYQLGMEEGFYLCHSL 89
V G S + + L + C+G+ + E+D+ LG+EE +L L
Sbjct: 29 QGVFNGLSVEVTDAQQGRSLYDNGCYGKGSKSRGGPASGEQDETLL-LGLEESCFLAFYL 87
Query: 90 KCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYR 149
L+I T + + K E F Y +L+ KNWV++SG ++G DF+ Y+
Sbjct: 88 GKLEIKSLSGDTMDWETFLNAAKELNERFLDNLACYLYLKAKNWVIKSGIKFGGDFLIYK 147
Query: 150 HHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGTAT 209
P L H+ + V+V + ++G ++ R+ K +LIL +++ + T T
Sbjct: 148 ESPRLYHASFLVIV----QTSDDGDYYQPKNLKGVQRVAETSDKDVLILRVSQPKEIT-T 202
Query: 210 PSCLEQYAVEERTISRWS 227
P +++ V E + R++
Sbjct: 203 PEDIQEITVTETIVRRFN 220
>gi|344233789|gb|EGV65659.1| hypothetical protein CANTEDRAFT_118126 [Candida tenuis ATCC 10573]
gi|344233790|gb|EGV65660.1| hypothetical protein CANTEDRAFT_118126 [Candida tenuis ATCC 10573]
Length = 391
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 23/177 (12%)
Query: 76 QLGMEEGFYLCHSLKCLKIVG-EDNSTKNDDELW-----QYMKAKKETFPLLYKAYSHLR 129
QL E F+L + L + ++ +D S + E++ +F + Y Y + R
Sbjct: 219 QLQPVELFFLKYGLDVVDVISSQDASALSTREVFFACCGTRTPIPSTSFIVQYVVYHYYR 278
Query: 130 KKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCG 189
W VRSG ++G DF+ Y+ P H+E+AVLV+ DG++ + W ++ R+ G
Sbjct: 279 SLGWSVRSGIKFGCDFILYKRGPQFSHAEHAVLVIP--ADGQHE--KSWVELQTLSRVIG 334
Query: 190 GVAKTLLILTIN-------------KNGQGTATPSCLEQYAVEERTISRWSPEQCRE 233
V KTL++ + T + L Y V E RW P + R+
Sbjct: 335 SVRKTLVLNYVEMPSVADFTAVLHPDQSDETLFTTLLRLYRVNEVVYRRWVPNKTRD 391
>gi|320589123|gb|EFX01585.1| tRNA-splicing endonuclease subunit [Grosmannia clavigera kw1407]
Length = 971
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 27/180 (15%)
Query: 71 DKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKND---DELWQYMK-------------AK 114
+K+ QL EE F+L + L L + D TK EL+ + +
Sbjct: 434 NKEHLQLSAEEAFFLAYGLGALVVT--DPETKKPLTTAELFSLCRQFSYFPPRTPNALST 491
Query: 115 KETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDG---E 171
+ F + Y Y H R WV R G ++GVD++ Y P+L H+E+ V+V+ D
Sbjct: 492 DDPFLVHYAVYHHFRSLGWVPRHGIKFGVDWLLYGKGPALDHAEFGVIVMPSYSDAWWKA 551
Query: 172 NGR---LRVWSDIHCTVRLCGGVAKTLLILTIN---KNGQGTATPSCLEQYAVEERTISR 225
NGR + W +H R+ V K+L+++ ++ + G + L+++ + E + R
Sbjct: 552 NGREAPRKSWHWLHSVNRVLSTVFKSLVLVYVDVPPPSAVGDSASDLLQRFQIREVMVRR 611
>gi|353245741|emb|CCA76599.1| related to tRNA splicing endonuclease beta subunit, partial
[Piriformospora indica DSM 11827]
Length = 386
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 26/171 (15%)
Query: 76 QLGMEEGFYLCHSLKCLKIVGEDNSTK-NDDELWQY---------MKAKKETFPLLYKAY 125
QL ++E F+L +++CL+I D + + +LW K +F + Y Y
Sbjct: 216 QLSLQEAFFLAWTVRCLRIHDSDTGQELSLQQLWNACFRISSPIGSKRVDNSFLVHYVVY 275
Query: 126 SHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGE----------NGRL 175
H R WVV+ G ++ VD++ Y+ P H+E+AV+++ ED + N
Sbjct: 276 HHFRSLGWVVKPGIKFCVDYLLYKRGPVFHHAEFAVMIVPVYEDAKERERSPRPLPNSGP 335
Query: 176 RVWSDIHCTVRLCGGVAKTLLILTI------NKNGQGTATPSCLEQYAVEE 220
W R V KTL++ + TP+ LE++ V+E
Sbjct: 336 LSWQWFSTVNRANAQVMKTLVLAHVMIPSSDRIKSSDLETPAILEKFQVKE 386
>gi|346975578|gb|EGY19030.1| tRNA-splicing endonuclease subunit SEN2 [Verticillium dahliae
VdLs.17]
Length = 540
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 79/191 (41%), Gaps = 31/191 (16%)
Query: 71 DKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYM--------------KAKKE 116
+K+ QL EE +L L LK++ T D + +
Sbjct: 352 NKEHLQLTGEEALFLSFGLGTLKVLDPQTKTPIDTSSLLTLFRQNAVFPPLPPTALLPDD 411
Query: 117 TFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAE------GEDG 170
+F L Y Y H R WV R G ++G+D++ Y P H+E+ V++L E+
Sbjct: 412 SFLLNYAVYHHFRSLGWVPRPGIKFGMDWMLYAKGPVFDHAEFGVIILPSYSHAWWKENK 471
Query: 171 ENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNG---------QGTATPSCLEQYAVEER 221
+ W +H VR+ V K+L+++ ++ QG A + L+ Y + E
Sbjct: 472 HPVPQKTWHWLHGVVRVLAHVHKSLVLVYVDVPPPPIFDKAFEQGPA--AALKLYKIREV 529
Query: 222 TISRWSPEQCR 232
+ RWS + R
Sbjct: 530 MVRRWSSNRNR 540
>gi|331228639|ref|XP_003326986.1| hypothetical protein PGTG_08763 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309305976|gb|EFP82567.1| hypothetical protein PGTG_08763 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 399
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 86/188 (45%), Gaps = 25/188 (13%)
Query: 71 DKQWYQLGMEEGFYLCHSLKCLKIV--GEDNSTKNDD--ELWQ-YMKA-----------K 114
D + QL EE F+L L CL + ED+S+ E+W + +A
Sbjct: 212 DLEHLQLMNEEAFFLSFGLGCLDVSLSAEDSSSGPLTILEMWDLFCRASLRGQSDQTIRP 271
Query: 115 KETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAY-RHHPSLVHSEYAVLVL---AEGEDG 170
F L Y Y H R WVVRSG ++ D+V Y P H+E+AV ++ A+G
Sbjct: 272 DNPFILSYVVYHHFRSLGWVVRSGIKFCADWVLYGSRGPVGGHAEFAVCMIPVYADGRPV 331
Query: 171 ENGRLR-VWSDIHCTVRLCGGVAKTLLILTINKNGQ----GTATPSCLEQYAVEERTISR 225
E R W + R+C GV KTL+++ + + +P L +Y ++E + R
Sbjct: 332 ETMEDRSSWRWLGTVNRVCSGVKKTLILVHVVVPDEFETDDLDSPEILTKYIIKEIALKR 391
Query: 226 WSPEQCRE 233
+ P + R+
Sbjct: 392 FIPARMRD 399
>gi|221475543|ref|NP_723994.2| CG31812 [Drosophila melanogaster]
gi|220902052|gb|AAN10958.2| CG31812 [Drosophila melanogaster]
Length = 233
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 25/209 (11%)
Query: 25 RFTFLSIQSEAHAVLAGYSALLAVEAEQTELL-NRACFG-----RHIVTAEKDKQWYQLG 78
RFT LS++ V+ EQ + L + CFG R + + + LG
Sbjct: 34 RFTGLSVE--------------IVDPEQAKSLHDNGCFGKGSKSRGGPASGDENETLFLG 79
Query: 79 MEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSG 138
MEE +L H L L I + + K E F +Y +L+ KNWV++SG
Sbjct: 80 MEESCFLAHYLNVLDITNSAGYLMDFCMFVEVAKEHNEKFVENLASYVYLKSKNWVIKSG 139
Query: 139 SQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLIL 198
++G DF+ Y+ P L H+ + V+V G D ++ + + + R+ K +L+L
Sbjct: 140 IKFGGDFLIYKQSPRLYHASFLVIVQKPG-DTDHYQSKNLKGVQ---RVAETSDKDVLLL 195
Query: 199 TINKNGQGTATPSCLEQYAVEERTISRWS 227
T+ + +++ L++ V E + R++
Sbjct: 196 TVQPPKKISSSRD-LQEATVTETIVRRFN 223
>gi|206597338|gb|ACI15763.1| RE20410p [Drosophila melanogaster]
Length = 232
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 25/209 (11%)
Query: 25 RFTFLSIQSEAHAVLAGYSALLAVEAEQTELL-NRACFG-----RHIVTAEKDKQWYQLG 78
RFT LS++ V+ EQ + L + CFG R + + + LG
Sbjct: 33 RFTGLSVE--------------IVDPEQAKSLHDNGCFGKGSKSRGGPASGDENETLFLG 78
Query: 79 MEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSG 138
MEE +L H L L I + + K E F +Y +L+ KNWV++SG
Sbjct: 79 MEESCFLAHYLNVLDITNSAGYLMDFCMFVEVAKEHNEKFVENLASYVYLKSKNWVIKSG 138
Query: 139 SQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLIL 198
++G DF+ Y+ P L H+ + V+V G D ++ + + + R+ K +L+L
Sbjct: 139 IKFGGDFLIYKQSPRLYHASFLVIVQKPG-DTDHYQSKNLKGVQ---RVAETSDKDVLLL 194
Query: 199 TINKNGQGTATPSCLEQYAVEERTISRWS 227
T+ + +++ L++ V E + R++
Sbjct: 195 TVQPPKKISSSRD-LQEATVTETIVRRFN 222
>gi|424513473|emb|CCO66095.1| predicted protein [Bathycoccus prasinos]
Length = 299
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 83/222 (37%), Gaps = 52/222 (23%)
Query: 58 RACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTK--------------- 102
R C R + +D +L E+ FYL + CL + + S
Sbjct: 69 RECVARDVPFVHRDVVALRLSPEDAFYLHAVVGCLVVYAYEESVVNSNSDDENDNNDNNN 128
Query: 103 -----------NDDELWQYMK-AKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRH 150
+ ++ W ++ F L A H R + W+ RSG QYG D V YR
Sbjct: 129 NNNKGGRHVELSREQFWTLLRETAGAAFGLKCVATCHFRLQGWLPRSGLQYGADLVLYRR 188
Query: 151 HPSLVHSEYAVLVLAEGEDG------------------ENGR------LRVWSDIHCTVR 186
HPSLVHS+ LVL E EN R W ++ R
Sbjct: 189 HPSLVHSDCCALVLPENNGARKSFDVFSEGNASESSLKENNRGELTKSFPKWYELQSLSR 248
Query: 187 LCGGVAKTLLILTINKNGQGTATPS-CLEQYAVEERTISRWS 227
LC V K L++ +I+ S + + V+E ISR++
Sbjct: 249 LCVQVNKKLILCSISVPEACDWNDSGVIAEATVKETEISRFN 290
>gi|322698085|gb|EFY89858.1| tRNA-splicing endonuclease subunit Sen2, putative [Metarhizium
acridum CQMa 102]
Length = 561
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 81/193 (41%), Gaps = 31/193 (16%)
Query: 71 DKQWYQLGMEEGFYLCHSLKCLKIV----GEDNSTKNDDELW-QYMKAKKET-------- 117
+++ QL EE F+L L + G+ + K L+ QY T
Sbjct: 369 NREHLQLMPEEAFFLTFGFGALSVTDPASGKSLTAKEMLTLFRQYSYFPPRTGGPDESDL 428
Query: 118 -----FPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGED--- 169
F + Y Y H R WV R+G ++GVD++ Y P H+E+ ++++ D
Sbjct: 429 GPDDGFLVHYAVYHHFRSLGWVPRAGIKFGVDWLLYTRGPVFDHAEFGLIIVPSYSDAWW 488
Query: 170 ---GENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQG-------TATPSCLEQYAVE 219
G+ G + W+ +H +R+ V K+L+++ ++ T L Y V
Sbjct: 489 KDRGKQGPQKTWAWLHSVIRVLSHVIKSLVLVYVDIPPPPKFDAALETGFAEALHLYRVR 548
Query: 220 ERTISRWSPEQCR 232
E + RWS + R
Sbjct: 549 EVMVKRWSSNRNR 561
>gi|322712803|gb|EFZ04376.1| tRNA-splicing endonuclease subunit Sen2, putative [Metarhizium
anisopliae ARSEF 23]
Length = 562
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 80/193 (41%), Gaps = 31/193 (16%)
Query: 71 DKQWYQLGMEEGFYLCHSLKCLKIV----GEDNSTKNDDELW-QYMKAKKET-------- 117
+++ QL EE F+L L + G+ +TK L+ QY T
Sbjct: 370 NREHLQLMPEEAFFLTFGFGALSVTDPASGKSLTTKEMLTLFRQYSYFPPRTGCPDEPEL 429
Query: 118 -----FPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGED--- 169
F + Y Y H R WV R+G ++GVD++ Y P H+E+ ++++ D
Sbjct: 430 GPDDGFLVHYAVYHHFRSLGWVPRAGIKFGVDWLLYTRGPVFDHAEFGLIIVPSYSDVWW 489
Query: 170 ---GENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQG-------TATPSCLEQYAVE 219
G+ G W +H +R+ K+L+++ ++ T L+ Y V
Sbjct: 490 KNRGKQGPQNTWPWLHSVIRVLSHAVKSLVLVYVDIPPPPKFDAALETGFAEALQLYRVR 549
Query: 220 ERTISRWSPEQCR 232
E + RWS + R
Sbjct: 550 EVMVKRWSSNRNR 562
>gi|310799348|gb|EFQ34241.1| tRNA intron endonuclease [Glomerella graminicola M1.001]
Length = 784
Score = 64.3 bits (155), Expect = 4e-08, Method: Composition-based stats.
Identities = 53/214 (24%), Positives = 90/214 (42%), Gaps = 45/214 (21%)
Query: 48 VEAEQTELLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKN---D 104
++AE TE+ NR H+ QL EE F+L + L++V D +TK
Sbjct: 587 IKAETTEIANR----EHL----------QLTSEEAFFLSFGMGALRVV--DPATKAPIPT 630
Query: 105 DELWQYMKA-------------KKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHH 151
EL+ ++ + F + Y Y H R WV R+G ++GVD++ Y
Sbjct: 631 PELFNLFRSYSYFPSQAAGELQPDDGFLVNYAVYHHFRSLGWVPRAGIKFGVDWMLYARG 690
Query: 152 PSLVHSEYAVLVLAEGEDG----ENGRL--RVWSDIHCTVRLCGGVAKTLLILTIN---- 201
P H+E+ ++L D + RL + W +H VR+ V K+L+++ ++
Sbjct: 691 PVFDHAEFGAIILPSYSDQWWKESDRRLPRKTWHWLHGIVRVLSHVQKSLVLVYVDVPPP 750
Query: 202 ---KNGQGTATPSCLEQYAVEERTISRWSPEQCR 232
+ Y + E + RWS + R
Sbjct: 751 PQFDEAMKKGPAEVFKLYKIREVMVKRWSSNRNR 784
>gi|351707538|gb|EHB10457.1| tRNA-splicing endonuclease subunit Sen2 [Heterocephalus glaber]
Length = 225
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 10/141 (7%)
Query: 100 STKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEY 159
S D + + +K+ K T Y AY + R K+WV ++G +YG D + YR H+ Y
Sbjct: 85 SKGEDTQAVEEVKSIKTT----YGAYHYFRSKDWVPKTGLKYGTDLLLYRKGTPFYHASY 140
Query: 160 AVLV--LAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGTAT----PSCL 213
+V+V + + G R W + R+ G V+K L++ + K T P CL
Sbjct: 141 SVIVELVDKRFTGPLRRPSTWKSLATLSRVSGNVSKELMLCHLIKPSTMTDEDMKFPECL 200
Query: 214 EQYAVEERTISRWSPEQCRED 234
+ V+E +SRW + R D
Sbjct: 201 RRIKVQEVILSRWVSSRERSD 221
>gi|406601634|emb|CCH46747.1| putative tRNA-splicing endonuclease subunit [Wickerhamomyces
ciferrii]
Length = 353
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 80/170 (47%), Gaps = 16/170 (9%)
Query: 76 QLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKK--ETFPLLYKAYSHLRKKNW 133
+L E F+L +L + I D EL+ + + K + F + Y Y H R W
Sbjct: 188 ELFAAEAFFLKFALNAINIRHNDQPISTV-ELFNKLSSSKVDDLFIMNYVVYHHYRSLGW 246
Query: 134 VVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGEN----GRLRVWSDIHCTVRLCG 189
VRSG ++G +++ Y+ P H+E+AV++L +D + + VW + R+ G
Sbjct: 247 CVRSGIKFGTEYLLYKRGPPFHHAEHAVIILPNYKDEQQNEQVAKDFVW--LSSISRVIG 304
Query: 190 GVAKTLLILTINKNGQGTATPSC--LEQ----YAVEERTISRWSPEQCRE 233
GV K L+I+ ++ Q SC LE+ Y + E RW + R+
Sbjct: 305 GVRKNLIIVFVDIPTQ-EEFDSCETLEEKFKLYKINELLYRRWVANKNRD 353
>gi|226287124|gb|EEH42637.1| BRCT domain-containing protein [Paracoccidioides brasiliensis Pb18]
Length = 2048
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 69/155 (44%), Gaps = 27/155 (17%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDE-----LWQ--YMKAKKETFP--- 119
K+++ QL EE F+L + L L++ D +T L Q Y + + P
Sbjct: 284 KNEEHLQLSNEEAFFLVYGLGVLQVYDSDRTTILTATSLLPLLRQHSYFPPRDSSMPGEP 343
Query: 120 -----LLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDG---- 170
L Y Y H R WV+RSG ++GVD++ Y P H+E+AV +L D
Sbjct: 344 DDPFILSYVIYHHFRSLGWVIRSGVKFGVDYLLYNRGPVFSHAEFAVCLLPAYSDPYWRV 403
Query: 171 -ENGRL-------RVWSDIHCTVRLCGGVAKTLLI 197
E R R W +HC R+ V K+L++
Sbjct: 404 TEERRQMIAKKQGRTWWWLHCVNRVQAQVKKSLIL 438
>gi|339237859|ref|XP_003380484.1| L-aminoadipate-semialdehyde
dehydrogenase-phosphopantetheinyltransferase
[Trichinella spiralis]
gi|316976653|gb|EFV59900.1| L-aminoadipate-semialdehyde
dehydrogenase-phosphopantetheinyltransferase
[Trichinella spiralis]
Length = 805
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 3/123 (2%)
Query: 106 ELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLA 165
E + Y A F + Y H R++ W+V+ G YGVD+V Y P+ VHS++ V+++
Sbjct: 368 EFFSYCIASAADFVFRFAVYLHFRRRGWIVKPGLNYGVDYVVYPDAPNNVHSQFMVIIVP 427
Query: 166 EGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTI-NKNGQ-GTATPSCLEQYAVEERTI 223
+G + W D R+ V+K +L+ + N NG T + LEQ V+ +
Sbjct: 428 HW-NGFHELPMTWRDAVSASRISSAVSKNVLLCGVKNLNGDFQKLTLADLEQCPVQIVCL 486
Query: 224 SRW 226
+W
Sbjct: 487 KQW 489
>gi|339256884|ref|XP_003370183.1| L-aminoadipate-semialdehyde
dehydrogenase-phosphopantetheinyltransferase
[Trichinella spiralis]
gi|316962618|gb|EFV48706.1| L-aminoadipate-semialdehyde
dehydrogenase-phosphopantetheinyltransferase
[Trichinella spiralis]
Length = 422
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 3/123 (2%)
Query: 106 ELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLA 165
E + Y A F + Y H R++ W+V+ G YGVD+V Y P+ VHS++ V+++
Sbjct: 66 EFFSYCIASAADFVFRFAVYLHFRRRGWIVKPGLNYGVDYVVYPDAPNNVHSQFMVIIVP 125
Query: 166 EGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTI-NKNGQ-GTATPSCLEQYAVEERTI 223
+G + W D R+ V+K +L+ + N NG T + LEQ V+ +
Sbjct: 126 HW-NGFHELPMTWRDAVSASRISSAVSKNVLLCGVKNLNGDFQKLTLADLEQCPVQIVCL 184
Query: 224 SRW 226
+W
Sbjct: 185 KQW 187
>gi|209879547|ref|XP_002141214.1| tRNA intron endonuclease, catalytic C-terminal domain-containing
protein [Cryptosporidium muris RN66]
gi|209556820|gb|EEA06865.1| tRNA intron endonuclease, catalytic C-terminal domain-containing
protein [Cryptosporidium muris RN66]
Length = 224
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 59/104 (56%), Gaps = 8/104 (7%)
Query: 120 LLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV-------LAEG-EDGE 171
++Y YS R + ++VRSG +YGVDF+ Y P++VH+ Y+V + + +G +
Sbjct: 118 IIYPVYSFFRNEKYIVRSGLKYGVDFILYEKSPTVVHASYSVKIGNFLPNDIYQGLSKSQ 177
Query: 172 NGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGTATPSCLEQ 215
G+ W D+ +RL V+K LL++T + N + +C+++
Sbjct: 178 LGKPIKWRDVIGLLRLTEAVSKDLLLVTPDLNDKFKIHCTCIQR 221
>gi|221043220|dbj|BAH13287.1| unnamed protein product [Homo sapiens]
Length = 402
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
Query: 80 EEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGS 139
EE F+L ++L CL I E +LW+ + TF Y AY + R K WV + G
Sbjct: 276 EEAFFLVYALGCLSIYYEKEPL-TIVKLWKAFTVVQPTFRTTYMAYHYFRSKGWVPKVGL 334
Query: 140 QYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGGVAKT 194
+YG D + YR P H+ Y+V++ + + +G R W + R+ V+K
Sbjct: 335 KYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGSLRRPLSWKSLAALSRVSVNVSKV 391
>gi|223972638|ref|NP_001138867.1| tRNA-splicing endonuclease subunit Sen2 isoform 4 [Homo sapiens]
gi|119584533|gb|EAW64129.1| tRNA splicing endonuclease 2 homolog (S. cerevisiae), isoform CRA_b
[Homo sapiens]
Length = 402
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
Query: 80 EEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGS 139
EE F+L ++L CL I E +LW+ + TF Y AY + R K WV + G
Sbjct: 276 EEAFFLVYALGCLSIYYEKEPL-TIVKLWKAFTVVQPTFRTTYMAYHYFRSKGWVPKVGL 334
Query: 140 QYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGGVAKT 194
+YG D + YR P H+ Y+V++ + + +G R W + R+ V+K
Sbjct: 335 KYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGSLRRPLSWKSLAALSRVSVNVSKV 391
>gi|431899942|gb|ELK07889.1| Putative E3 ubiquitin-protein ligase makorin-2 [Pteropus alecto]
Length = 798
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I E +LW+ + TF Y AY + R K
Sbjct: 295 EYLQLSLEEAFFLVYALGCLSIYYEKEPL-TIVKLWKVFTIVRPTFRTTYMAYHYFRSKG 353
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVL 162
WV ++G +YG D + YR P H+ +L
Sbjct: 354 WVPKTGLKYGTDLLLYRKGPPFYHASEELL 383
>gi|302309380|ref|NP_986738.2| AGR073Cp [Ashbya gossypii ATCC 10895]
gi|442570021|sp|Q74ZY5.2|SEN2_ASHGO RecName: Full=tRNA-splicing endonuclease subunit SEN2; AltName:
Full=tRNA-intron endonuclease SEN2
gi|299788332|gb|AAS54562.2| AGR073Cp [Ashbya gossypii ATCC 10895]
gi|374109989|gb|AEY98894.1| FAGR073Cp [Ashbya gossypii FDAG1]
Length = 356
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 15/122 (12%)
Query: 121 LYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSD 180
LY AY H R W VRSG ++G DF+ YR P H+E++V+VLA E + ++
Sbjct: 241 LYAAYHHYRSHGWCVRSGIKFGCDFLLYRRGPPFHHAEFSVMVLAPDERHD------YTW 294
Query: 181 IHCTVRLCGGVAKTLLILTINKNGQGTATPSC------LEQYA---VEERTISRWSPEQC 231
R+ GG KTL++ + + + +E +A V E RW P +
Sbjct: 295 YSTVARVVGGAQKTLVLAYVARRAAADQLAALWHARRYMEAFALFEVHELVYRRWLPGKN 354
Query: 232 RE 233
RE
Sbjct: 355 RE 356
>gi|350640207|gb|EHA28560.1| hypothetical protein ASPNIDRAFT_212403 [Aspergillus niger ATCC
1015]
Length = 1876
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 27/155 (17%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFP---------- 119
++++ QL EE F+L + L L++ + +++ + + FP
Sbjct: 253 RNEEHLQLSNEEAFFLAYGLGVLRVRDDTRTSEIPTSSLLPLLCQHSYFPPGAPSADPTP 312
Query: 120 -----LLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDG---- 170
+ Y Y H R WVVRSG ++GVD++ Y P H+E+AV+V+ G
Sbjct: 313 DDPFMISYVVYHHFRSLGWVVRSGVKFGVDYILYNRGPVFSHAEFAVVVVPSYGHGYWSE 372
Query: 171 --------ENGRLRVWSDIHCTVRLCGGVAKTLLI 197
E R W +HC R+ V K+L++
Sbjct: 373 TAERKAQCEEKMARSWWWLHCVNRVQAQVKKSLVV 407
>gi|195433603|ref|XP_002064800.1| GK15008 [Drosophila willistoni]
gi|194160885|gb|EDW75786.1| GK15008 [Drosophila willistoni]
Length = 243
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 98/225 (43%), Gaps = 20/225 (8%)
Query: 17 RSHVQNH----LRFTFLSIQSEAHAVLAGYSALLAVEAEQTELLNRACFG-----RHIVT 67
RSH +N+ L +Q E V G S + + L + CFG R
Sbjct: 11 RSHFKNNDAAPLPLPEEGLQYEG--VFTGLSVDVTQPDQVKSLYDNGCFGKGSKSRGGPE 68
Query: 68 AEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSH 127
+ + +LG+EE +L + L L+I + ++ + + E F AY +
Sbjct: 69 SGDPDESLRLGLEEACFLAYFLNVLQIKDLEGKVIEWNDFLNFSRELNERFMEHLAAYVY 128
Query: 128 LRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRL 187
L+ K WV++SG ++G DF+ Y+ P H+ + VL+ E + ++ R+
Sbjct: 129 LKSKYWVIKSGIKFGGDFLIYKQSPRHFHASFLVLIQRPNEKNH----FLAKNLKGVQRV 184
Query: 188 CGGVAKTLLILTINKNGQG-TATP----SCLEQYAVEERTISRWS 227
K +L+L+I ++ G + TP +E ++E + R++
Sbjct: 185 AETSDKDVLLLSIEQSTDGESKTPENPSEAIEDMCIQETVVRRFN 229
>gi|171693233|ref|XP_001911541.1| hypothetical protein [Podospora anserina S mat+]
gi|170946565|emb|CAP73366.1| unnamed protein product [Podospora anserina S mat+]
Length = 401
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 16/115 (13%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTK---NDDELWQYMKA-----------KK 115
+DK+ +QL EE F+L SL LK++ D T+ +++ L ++
Sbjct: 213 QDKEHFQLAPEEAFFLAFSLGALKVI--DPKTREPISNERLLSLFRSYSYFPPSAGLRPD 270
Query: 116 ETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDG 170
+ F + Y Y H R WV R G ++GVD++ Y+ P HSE+ ++V+ D
Sbjct: 271 DPFLVHYAVYHHFRSLGWVPRHGIKFGVDWILYQRGPVFDHSEFGLMVMPAFSDA 325
>gi|342873687|gb|EGU75844.1| hypothetical protein FOXB_13644 [Fusarium oxysporum Fo5176]
Length = 1101
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 86/199 (43%), Gaps = 35/199 (17%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKIV----GEDNSTKNDDELWQ---YMKAKKE------ 116
K+ + QL EE F+L L L + G S+ + L++ Y + E
Sbjct: 412 KNMEHLQLTPEEAFFLSFGLGVLTVTDPSSGAQLSSSDLLRLFRQHSYFPPRVEPADPAL 471
Query: 117 ----TFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGED--- 169
F + Y Y + R WV R+G ++GVD++ Y P H+E+ ++V+ D
Sbjct: 472 QPDDNFLIHYAVYHYFRSLGWVPRAGIKFGVDWLLYAKGPVFDHAEFGLIVVPSYSDALW 531
Query: 170 ---GENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNG---------QGTATPSCLEQYA 217
G+ + W +H TVR+ V K+L+++ ++ QG A L+ Y
Sbjct: 532 KEAGKQDPQKTWQWLHGTVRVLSHVTKSLVLVYVDVPPPPKFEKALEQGVA--EALKLYK 589
Query: 218 VEERTISRW-SPEQCREDP 235
V E + RW + CR P
Sbjct: 590 VREVMVKRWLTAYSCRALP 608
>gi|443895145|dbj|GAC72491.1| tRNA splicing endonuclease SEN2 [Pseudozyma antarctica T-34]
Length = 528
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 79/216 (36%), Gaps = 54/216 (25%)
Query: 71 DKQWYQLGMEEGFYLCHSLKCLKI---VGEDNSTK-NDDELWQYMKAKKETFPLL----- 121
D + QL + E F+L CL I G ST DE +Q PLL
Sbjct: 312 DVERMQLSLVEAFFLSSMFGCLDIRTTTGRHTSTPLGLDEFYQLCLESTLPQPLLDLRSR 371
Query: 122 ---------------------YKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYA 160
Y AY H R WVV+SG ++ D + Y+ P H+E+A
Sbjct: 372 GLASRHLASLYARPDNPFLINYVAYHHFRSLGWVVKSGIKFCADLLLYKRGPVFSHAEFA 431
Query: 161 VLVLAEGEDG-----------ENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGTAT 209
V+++ ED N + W+ T R+ V KTL++ +
Sbjct: 432 VVIIPSYEDEADAQTSPFAPHPNAGRKDWTWFSTTNRVQSQVLKTLILAHVFVPSIKRCP 491
Query: 210 PSCLE-------------QYAVEERTISRWSPEQCR 232
P LE YAV+E I RW P + +
Sbjct: 492 PETLESPTAFFEALRMRRSYAVKEVAIRRWVPARMK 527
>gi|448528765|ref|XP_003869748.1| Sen2 tRNA splicing endonuclease subunit [Candida orthopsilosis Co
90-125]
gi|380354102|emb|CCG23615.1| Sen2 tRNA splicing endonuclease subunit [Candida orthopsilosis]
Length = 374
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 56/130 (43%), Gaps = 15/130 (11%)
Query: 118 FPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRV 177
F + Y AY + R K W VRSG ++G D++ Y+ P H+E+ V V+ + + G
Sbjct: 246 FIVNYVAYHYFRSKGWCVRSGIKFGTDYLLYKRGPPFSHAEFCVSVMQDDYEQGIGPYD- 304
Query: 178 WSDIHCTVRLCGGVAKTLL--------------ILTINKNGQGTATPSCLEQYAVEERTI 223
W I R+ G V K + I T + G L +Y V E
Sbjct: 305 WFQICAKARVIGSVKKNFVQIYVEAPSQVEFDKIFTTSDIDDGLMFKQLLSKYRVSEVLY 364
Query: 224 SRWSPEQCRE 233
RW+P + R+
Sbjct: 365 KRWNPSRTRD 374
>gi|378728691|gb|EHY55150.1| tRNA-intron endonuclease [Exophiala dermatitidis NIH/UT8656]
Length = 503
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 87/200 (43%), Gaps = 35/200 (17%)
Query: 69 EKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNST------------KNDDELWQYMKAKKE 116
++D++ L +EE F+L + L L+I +D+ ++ + + A E
Sbjct: 304 QEDQEHLNLSLEEAFFLSYGLGVLQIYCDDSDAVLPPSSLLSLFRRHSYHPPRSLSAPAE 363
Query: 117 T---FPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAE------G 167
F L Y Y H R WVVRSG ++ D++ Y P+ H+E+AV+++
Sbjct: 364 PDDPFMLSYVVYHHYRSLGWVVRSGVKFSTDYLLYNRGPAFSHAEFAVVIIPSYSHPSWT 423
Query: 168 EDGE------NGRLRVWSDIHCTVRLCGGVAKTLLILTIN-----KNG---QGTATPSCL 213
E E + W +H R+ V K L++ ++ KNG + L
Sbjct: 424 ETPELKKAVEKKSKKTWWWLHGINRVQAQVHKQLVLCYVDVPPPSKNGAKRKDIDIGHLL 483
Query: 214 EQYAVEERTISRWSPEQCRE 233
QY + + + RW+P + R+
Sbjct: 484 SQYKIRDVNVRRWTPNRSRD 503
>gi|50294868|ref|XP_449845.1| hypothetical protein [Candida glabrata CBS 138]
gi|49529159|emb|CAG62825.1| unnamed protein product [Candida glabrata]
Length = 368
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 16/122 (13%)
Query: 122 YKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDI 181
Y AY H R W VRSG ++G D++ Y+ P H+E+A++VL E + ++
Sbjct: 253 YAAYHHYRSLKWCVRSGIKFGCDYLLYKRGPPFQHAEFAIMVLDHTESHD------YTWY 306
Query: 182 HCTVRLCGGVAKTLLILTINKNGQGTAT----------PSCLEQYAVEERTISRWSPEQC 231
R+ G KTL++ I+ G T L+ + V E T RW P +
Sbjct: 307 SSVARVASGAKKTLILCYIDDQGLTNETLLDLWHQGNLVKLLQHFKVAEVTYKRWIPGKN 366
Query: 232 RE 233
R+
Sbjct: 367 RD 368
>gi|67902536|ref|XP_681524.1| hypothetical protein AN8255.2 [Aspergillus nidulans FGSC A4]
gi|40739803|gb|EAA58993.1| hypothetical protein AN8255.2 [Aspergillus nidulans FGSC A4]
gi|259481044|tpe|CBF74219.1| TPA: DNA damage repair protein (Rad9), putative (AFU_orthologue;
AFUA_5G04020) [Aspergillus nidulans FGSC A4]
Length = 1851
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 32/176 (18%)
Query: 50 AEQTELLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGED----------- 98
A++T + R G +T E + QL EE F+L + L L I D
Sbjct: 237 ADRTVINLRDPSGELAITNE---EHLQLSNEEAFFLVYGLGALHIFDHDLKTVLSPTSLL 293
Query: 99 -----NSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPS 153
+S +L +K + F + Y Y H R WVVRSG ++GVD++ Y P
Sbjct: 294 RTLCHHSYSPPRDLSMDLKTD-DPFLVSYVVYHHFRSLGWVVRSGVKFGVDYLLYYRGPV 352
Query: 154 LVHSEYAVLVL--------AEGEDGE----NGRLRVWSDIHCTVRLCGGVAKTLLI 197
H+E+AV+V+ +E +D + + R W HC R+ V KTL++
Sbjct: 353 FSHAEFAVVVIPSYDHPYWSETKDRKAECARKQSRSWWWFHCVNRVQAQVKKTLVV 408
>gi|146419022|ref|XP_001485476.1| hypothetical protein PGUG_03205 [Meyerozyma guilliermondii ATCC
6260]
Length = 372
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 73/174 (41%), Gaps = 19/174 (10%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL E F+L +L +++ + + L A +F + Y Y H R
Sbjct: 205 EYLQLQPVEFFFLYFALGVTQLLPPRSFLDTLNTLVPSPLASS-SFLVEYAVYHHYRSLG 263
Query: 133 WVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVA 192
W VR G ++G D + Y+ P H+E+A+ + D WSDI R+ GGV
Sbjct: 264 WCVRLGIKFGCDMLLYKRGPPFSHAEFAIKISTTEPDFHYE----WSDISALARVVGGVK 319
Query: 193 KTLLILTI-------------NKNGQGTATPSCLEQYAVEERTISRWSPEQCRE 233
KTL+++ + N N L+ Y + E RW P + R+
Sbjct: 320 KTLVLVYVEVPNDAQFQDQWHNVNSADNFL-QLLKTYKITEILYKRWVPSRTRD 372
>gi|396498051|ref|XP_003845125.1| similar to tRNA-splicing endonuclease subunit Sen2 [Leptosphaeria
maculans JN3]
gi|312221706|emb|CBY01646.1| similar to tRNA-splicing endonuclease subunit Sen2 [Leptosphaeria
maculans JN3]
Length = 483
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 71/174 (40%), Gaps = 36/174 (20%)
Query: 79 MEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSG 138
+E + +L C+ + DN F L Y Y H R WVVR G
Sbjct: 327 LESAASIDTALTCIPEISPDNP-----------------FMLKYVVYHHFRSLGWVVRPG 369
Query: 139 SQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDG---------ENGRLRVWSDIHCTVRLCG 189
++ VD++ Y P+ H+E+A++++ D + + + W +H R+
Sbjct: 370 IKFAVDYLLYLRGPAFTHAEFAIIIIPSYSDPYWKNAVEGTTSMKDKDWWWLHRVNRVQT 429
Query: 190 GVAKTLLILTINKNGQ----------GTATPSCLEQYAVEERTISRWSPEQCRE 233
V KTLL++ + + L++Y V E + RWSP + R+
Sbjct: 430 QVMKTLLLVYVEVPAPWDQRHTGADFKVDIGNVLQKYTVREFVLKRWSPSRNRD 483
>gi|302408699|ref|XP_003002184.1| tRNA-splicing endonuclease subunit Sen2 [Verticillium albo-atrum
VaMs.102]
gi|261359105|gb|EEY21533.1| tRNA-splicing endonuclease subunit Sen2 [Verticillium albo-atrum
VaMs.102]
Length = 555
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 79/191 (41%), Gaps = 31/191 (16%)
Query: 71 DKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYM--------------KAKKE 116
+K+ QL EE +L L LK++ T D + +
Sbjct: 367 NKEHLQLTGEEALFLSFGLGTLKVLDLQTKTPIDTSSLLTLFRQNAVFPPLPPTALLPDD 426
Query: 117 TFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAE------GEDG 170
+F L Y Y H R WV R G ++G+D++ Y P H+E+ V++L ++
Sbjct: 427 SFLLNYAVYHHFRSLGWVPRPGIKFGMDWMLYAKGPVFDHAEFGVIILPSYSHAWWKDNK 486
Query: 171 ENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNG---------QGTATPSCLEQYAVEER 221
+ W +H VR+ V K+L+++ ++ QG A + L+ Y + E
Sbjct: 487 HPVPQKTWHWLHGVVRVLAHVHKSLVLVYVDVPPPPIFDKAFEQGPA--AALKLYKIREV 544
Query: 222 TISRWSPEQCR 232
+ RWS + R
Sbjct: 545 MVRRWSSNRNR 555
>gi|50546148|ref|XP_500601.1| YALI0B07293p [Yarrowia lipolytica]
gi|49646467|emb|CAG82834.1| YALI0B07293p [Yarrowia lipolytica CLIB122]
Length = 342
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 72/168 (42%), Gaps = 16/168 (9%)
Query: 71 DKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRK 130
D ++ QL E +L H LK+ D D+ K F Y Y H R
Sbjct: 186 DIEFLQLMDVEALFL-HMAFGLKVGDMDVKAMVDE-----FTRKDPRFLTYYAVYHHYRS 239
Query: 131 KNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGG 190
W VRSG ++G DF+ Y+ P H+E+ + V+ + E + W C R+ GG
Sbjct: 240 LGWCVRSGIKFGADFLLYKKGPPFTHAEFCIKVMPKDEPMPDF---WWQSNLC--RVIGG 294
Query: 191 VAKTLLILTIN-KNGQGTATPS----CLEQYAVEERTISRWSPEQCRE 233
V KT + ++ +G + L+Q+ V E RW P + R+
Sbjct: 295 VKKTTVFCFVDVPKVEGVVDDAKLVEVLKQFKVREVVYRRWIPSRNRD 342
>gi|158288335|ref|XP_310213.4| AGAP009485-PA [Anopheles gambiae str. PEST]
gi|157019201|gb|EAA05863.4| AGAP009485-PA [Anopheles gambiae str. PEST]
Length = 143
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 63/127 (49%), Gaps = 3/127 (2%)
Query: 77 LGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVR 136
L +EE F+L H L L + +T + + + + K F + AY +L+ KNW+++
Sbjct: 8 LFLEEAFFLMHVLNILCLKDTRGNTISVAQAFAKFRKVKRNFLACFCAYLYLKSKNWIIK 67
Query: 137 SGSQYGVDFVAYRHHPSLVHSEYAVLV--LAEGEDGENGRLRVWSDIHCTVRLCGGVAKT 194
SG ++G DFV Y P H+ Y VL+ + +G D ++ + D R+ K
Sbjct: 68 SGIKFGGDFVVYVKGPQFYHASYIVLIQEVFDGADMQSSAID-GLDFQGFNRIAETTGKD 126
Query: 195 LLILTIN 201
LL L ++
Sbjct: 127 LLFLEVH 133
>gi|85100772|ref|XP_961022.1| hypothetical protein NCU01115 [Neurospora crassa OR74A]
gi|50401692|sp|Q9P6Y2.1|SEN2_NEUCR RecName: Full=Probable tRNA-splicing endonuclease subunit sen-2;
AltName: Full=tRNA-intron endonuclease sen-2
gi|7635886|emb|CAB88602.1| related to tRNA-splicing endonuclease beta chain [Neurospora
crassa]
gi|28922559|gb|EAA31786.1| predicted protein [Neurospora crassa OR74A]
Length = 633
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 20/145 (13%)
Query: 71 DKQWYQLGMEEGFYLCHSLKCLKIVGE-DNSTKNDDELWQYMKA-------------KKE 116
DK+ +QL EE F+L L L++V + ++++L ++A ++
Sbjct: 444 DKEHFQLAPEEAFFLTFGLGALRVVDPVTEAPISNEQLLIKLRANSYFPPRSVDNLSPED 503
Query: 117 TFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRL- 175
F + Y Y H R WV R G ++GVD++ Y+ P HSE+ ++V+ D
Sbjct: 504 PFLVQYAVYHHFRSLGWVPRHGIKFGVDWIIYQRGPVFDHSEFGIMVVPSFSDPRWSEFE 563
Query: 176 -----RVWSDIHCTVRLCGGVAKTL 195
+ WS + R+ V K+L
Sbjct: 564 HEESKKTWSWLMGVNRVLSHVLKSL 588
>gi|453083719|gb|EMF11764.1| hypothetical protein SEPMUDRAFT_26011, partial [Mycosphaerella
populorum SO2202]
Length = 378
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 74/191 (38%), Gaps = 55/191 (28%)
Query: 76 QLGMEEGFYLCHSLKCLKI--VGEDNSTKND-----DELWQYMKA-------------KK 115
QL +EE F+L + L L+I ST N L Q A
Sbjct: 210 QLTLEEAFFLSYGLGVLQIHLPTTPPSTLNPAASSTQSLLQIFSAHSFFPPASSETIRPD 269
Query: 116 ETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLA-------EGE 168
+ F L Y Y H R WVVR G ++ VD++ Y P H+E+A++++ E
Sbjct: 270 DPFLLNYVVYHHFRSLGWVVRPGLKFSVDYLLYYRGPVFSHAEFAIIIVPAYSHAYWTTE 329
Query: 169 DGENGRLRV------WSDIHCTVRLCGGVAKTLLILTINKNGQGTATPSCLEQYAVEERT 222
GE R RV W +HC R G + L +Y V E
Sbjct: 330 QGERER-RVKGSGGDWWWMHCVNRDVGAL---------------------LRRYKVREFV 367
Query: 223 ISRWSPEQCRE 233
+ RW+P + R+
Sbjct: 368 VKRWTPNRSRD 378
>gi|227830655|ref|YP_002832435.1| tRNA-splicing endonuclease subunit alpha [Sulfolobus islandicus
L.S.2.15]
gi|229579563|ref|YP_002837962.1| tRNA-splicing endonuclease subunit alpha [Sulfolobus islandicus
Y.G.57.14]
gi|284998183|ref|YP_003419950.1| tRNA intron endonuclease [Sulfolobus islandicus L.D.8.5]
gi|259645862|sp|C3MQX7.1|ENDA_SULIL RecName: Full=tRNA-splicing endonuclease; AltName: Full=tRNA-intron
endonuclease
gi|259645865|sp|C3N746.1|ENDA_SULIY RecName: Full=tRNA-splicing endonuclease; AltName: Full=tRNA-intron
endonuclease
gi|227457103|gb|ACP35790.1| tRNA intron endonuclease [Sulfolobus islandicus L.S.2.15]
gi|228010278|gb|ACP46040.1| tRNA intron endonuclease [Sulfolobus islandicus Y.G.57.14]
gi|284446078|gb|ADB87580.1| tRNA intron endonuclease [Sulfolobus islandicus L.D.8.5]
Length = 182
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 68/138 (49%), Gaps = 6/138 (4%)
Query: 37 AVLAGYSALLAVEAEQTELLNRACFGRHI-VTAEKDKQ----WYQLGMEEGFYLCHSLKC 91
A+L G L+ E + + +G+ I ++ KD + +L + E YL
Sbjct: 4 ALLVGSKVLIPNVDESRYIYSNGFYGKAIGISKPKDPKDIIRPLELSLIESVYLAKK-GL 62
Query: 92 LKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHH 151
+K++ ++ ++L++Y F ++Y+ Y LR+K ++VRSG +YG DF Y
Sbjct: 63 IKVIDKNGEVLEYEKLYEYSSKIINKFDIMYRVYEDLREKGFIVRSGVKYGADFAVYTLG 122
Query: 152 PSLVHSEYAVLVLAEGED 169
P L H+ Y V+ + E+
Sbjct: 123 PGLEHAPYVVIAVDIDEE 140
>gi|255070077|ref|XP_002507120.1| tRNA-splicing endonuclease subunit Sen2 [Micromonas sp. RCC299]
gi|226522395|gb|ACO68378.1| tRNA-splicing endonuclease subunit Sen2 [Micromonas sp. RCC299]
Length = 321
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 24/97 (24%)
Query: 124 AYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV-------------------- 163
+Y H R+ W+ +SG QYG DFV Y HPS VHSEY V++
Sbjct: 183 SYLHFRRVGWLPKSGLQYGSDFVLYYCHPSTVHSEYCVVLHPHKAGNALRDDSAIAAQKL 242
Query: 164 ----LAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLL 196
+ E +L W+D+ RLCG V+K+L+
Sbjct: 243 EQDCALQSNSIETDQLASWADVQAVTRLCGQVSKSLV 279
>gi|15897369|ref|NP_341974.1| tRNA-splicing endonuclease subunit alpha [Sulfolobus solfataricus
P2]
gi|284173289|ref|ZP_06387258.1| tRNA-splicing endonuclease subunit alpha [Sulfolobus solfataricus
98/2]
gi|384433892|ref|YP_005643250.1| tRNA intron endonuclease [Sulfolobus solfataricus 98/2]
gi|54035953|sp|Q97ZY3.1|ENDA_SULSO RecName: Full=tRNA-splicing endonuclease; AltName: Full=tRNA-intron
endonuclease
gi|13813592|gb|AAK40764.1| tRNA intron endonuclease, putative [Sulfolobus solfataricus P2]
gi|261602046|gb|ACX91649.1| tRNA intron endonuclease [Sulfolobus solfataricus 98/2]
Length = 182
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 6/138 (4%)
Query: 37 AVLAGYSALLAVEAEQTELLNRACFGRHIVTAE----KD-KQWYQLGMEEGFYLCHSLKC 91
A+L G L+ E L + +G+ I ++ KD + +L + E YL
Sbjct: 4 ALLVGSKVLVPSIDESRYLYSNGFYGKPIGISKPKGPKDIVRPLELSLIESVYLTKK-GL 62
Query: 92 LKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHH 151
+ +V ++ +L++Y K F +LYK Y LR+K ++VRSG +YG DF Y
Sbjct: 63 INVVDKNGDLLEYKKLYEYSAMKINKFEILYKVYEDLREKGFIVRSGVKYGADFAVYTLG 122
Query: 152 PSLVHSEYAVLVLAEGED 169
P L H+ Y V+ + E+
Sbjct: 123 PGLEHAPYVVIAVDIDEE 140
>gi|451854068|gb|EMD67361.1| hypothetical protein COCSADRAFT_288683 [Cochliobolus sativus
ND90Pr]
Length = 471
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 23/144 (15%)
Query: 113 AKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLA------- 165
A F L Y + H R WVVR G ++ VD++ Y P+ H+E+A++++
Sbjct: 328 APDNPFLLKYVVFHHFRSLGWVVRPGIKFAVDYLLYMRGPAFTHAEFAIMIIPSYSAPYW 387
Query: 166 -EGEDGE----NGRLRVWSDIHCTVRLCGGVAKTLLILTINK-----------NGQGTAT 209
E GE + + + W H R+ V KTL+++ + G
Sbjct: 388 NENSGGESKIADQQRKDWWWFHRVNRVQTQVMKTLMLVYVEVPEPWDTSATELGGFKVDI 447
Query: 210 PSCLEQYAVEERTISRWSPEQCRE 233
S L++Y V E RWSP + R+
Sbjct: 448 GSVLKKYKVREFVFKRWSPSRNRD 471
>gi|308810134|ref|XP_003082376.1| putative tRNA intron endonuclease (ISS) [Ostreococcus tauri]
gi|116060844|emb|CAL57322.1| putative tRNA intron endonuclease (ISS) [Ostreococcus tauri]
Length = 371
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 76/187 (40%), Gaps = 28/187 (14%)
Query: 80 EEGFYLCHSLKCLKI------------VGEDNSTKNDDELWQ-YMKAKKETFPLLYKAYS 126
E+ +Y+ L CL + +G + LW+ + + F + A
Sbjct: 184 EDAYYVASVLGCLCVSEVIEGREMEVKLGLGTCDMDLGTLWRRFRRDCGHAFAMKCAATM 243
Query: 127 HLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRV--------- 177
H R W+ RSG QYG D V Y+ HP+LVHS++ V ++ + ++ L
Sbjct: 244 HFRMLGWLPRSGLQYGADLVLYQRHPALVHSDFVVTLVPDVGARQSFVLDTSANRAVALD 303
Query: 178 -----WSDIHCTVRLCGGVAKTLLILTIN-KNGQGTATPSCLEQYAVEERTISRWSPEQC 231
W D+ T RL V K L ++ PSCL V E +ISR+ +
Sbjct: 304 AGWPDWPDVQATSRLAVQVNKKFLQAHVSAPKNLNWDDPSCLSHVWVNEISISRFRSNRN 363
Query: 232 REDPATV 238
E A V
Sbjct: 364 IESYAEV 370
>gi|229581773|ref|YP_002840172.1| tRNA-splicing endonuclease subunit alpha [Sulfolobus islandicus
Y.N.15.51]
gi|259645864|sp|C3NGJ0.1|ENDA_SULIN RecName: Full=tRNA-splicing endonuclease; AltName: Full=tRNA-intron
endonuclease
gi|228012489|gb|ACP48250.1| tRNA intron endonuclease [Sulfolobus islandicus Y.N.15.51]
Length = 182
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 68/138 (49%), Gaps = 6/138 (4%)
Query: 37 AVLAGYSALLAVEAEQTELLNRACFGRHI-VTAEKDKQ----WYQLGMEEGFYLCHSLKC 91
A+L G L+ E + + +G+ + ++ KD + +L + E YL
Sbjct: 4 ALLVGSKVLIPNVDESRYIYSNGFYGKAVGISKPKDPKDIIRPLELSLIESVYLAKK-GL 62
Query: 92 LKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHH 151
+K++ ++ ++L++Y F ++Y+ Y LR+K ++VRSG +YG DF Y
Sbjct: 63 IKVIDKNGEVLEYEKLYEYSSKIINKFDIMYRVYEDLREKGFIVRSGVKYGADFAVYTLG 122
Query: 152 PSLVHSEYAVLVLAEGED 169
P L H+ Y V+ + E+
Sbjct: 123 PGLEHAPYVVIAVDIDEE 140
>gi|358059909|dbj|GAA94339.1| hypothetical protein E5Q_00990 [Mixia osmundae IAM 14324]
Length = 378
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 83/192 (43%), Gaps = 34/192 (17%)
Query: 76 QLGMEEGFYLCHSLKCLKIV-GEDNSTKNDDELWQ-YMKAKKE--------------TFP 119
QL EE F+L +L + + E N + E W + + K F
Sbjct: 187 QLQREEAFFLLFALGSITLRHPELNENLSIIEAWDLFCRPPKPWDEGDLREPLRADNPFI 246
Query: 120 LLYKAYSHLRKKNWVVRSGSQYGVDFVAYR---------HHPSLVHSEYAVLVLAEGE-- 168
L Y Y H R WV RSG+++ VD++ YR P H+E++VLV+ E
Sbjct: 247 LSYVTYHHYRSLGWVCRSGTKFCVDWLLYRGADGSFTGGAGPVGTHAEFSVLVMPSYETT 306
Query: 169 ----DGENGRLRVWSDIHCTVRLCGGVAKTLLI--LTI-NKNGQGTATPSCLEQYAVEER 221
D W + R+ GV KTL++ +TI N +P+CL++Y V E
Sbjct: 307 RPDMDSIEETSTSWRWLATVNRVTSGVKKTLVLAYVTIPNLTEDELRSPACLQRYTVREF 366
Query: 222 TISRWSPEQCRE 233
+ R+ P + R+
Sbjct: 367 VLRRFIPARMRD 378
>gi|452841323|gb|EME43260.1| hypothetical protein DOTSEDRAFT_131389 [Dothistroma septosporum
NZE10]
Length = 413
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 77/197 (39%), Gaps = 57/197 (28%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKI------VGEDNSTKNDDELWQYMKAKKETFP---- 119
+D++ QL +EE F+L + L L I G N N D L ++ + TFP
Sbjct: 241 EDQEHLQLTLEEAFFLSYGLGVLSICYCHPTAGPYNPFANQDLLTRF--SHHSTFPPQSP 298
Query: 120 -----------LLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLA--- 165
L Y Y H R WVVR G ++ VD++ Y P H+E+AV+++
Sbjct: 299 FTEVPPDSKFLLNYVVYHHFRSLGWVVRPGVKFAVDYLLYFRGPVFSHAEFAVIIVPSYT 358
Query: 166 ----EGEDGENGRLRV-----WSDIHCTVRLCGGVAKTLLILTINKNGQGTATPSCLEQY 216
E G R RV W +HC R G + L+ Y
Sbjct: 359 KAHWRTEQGAKER-RVRQNNDWWWMHCVNRDIG---------------------TLLKMY 396
Query: 217 AVEERTISRWSPEQCRE 233
V E + RW + R+
Sbjct: 397 KVREFVVKRWVANRQRD 413
>gi|330930551|ref|XP_003303080.1| hypothetical protein PTT_15116 [Pyrenophora teres f. teres 0-1]
gi|311321204|gb|EFQ88836.1| hypothetical protein PTT_15116 [Pyrenophora teres f. teres 0-1]
Length = 472
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 61/146 (41%), Gaps = 25/146 (17%)
Query: 113 AKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVL-------- 164
A F L Y + H R WVVR G ++ VD++ Y P+ H+E+A++++
Sbjct: 327 APDNPFLLKYVVFHHFRSLGWVVRPGIKFAVDYLLYIRGPAFTHAEFAIMIIPSYSAQYW 386
Query: 165 ------AEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTIN-----------KNGQGT 207
A G + + W H R+ V KTL+++ + G
Sbjct: 387 NEQPDGATKPRGADKERKDWWWFHRVNRVQTQVMKTLMLVYVEVPEPWDTRCMGMGGFKV 446
Query: 208 ATPSCLEQYAVEERTISRWSPEQCRE 233
S L++Y V E RWSP + R+
Sbjct: 447 DVGSVLKKYTVREVVFKRWSPSRNRD 472
>gi|402081031|gb|EJT76176.1| hypothetical protein GGTG_06098 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 535
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 83/197 (42%), Gaps = 35/197 (17%)
Query: 71 DKQWYQLGMEEGFYLCHSLKCLKIVGEDN-STKNDDELWQ------YMKAKKETF----- 118
D++ QL +E F+L ++ L +V ST + EL + + +
Sbjct: 339 DREHLQLSAQEAFFLVFAIGALAVVDPKTESTLSTVELLHLFGDHSFFPPRTSSLDSPGF 398
Query: 119 ----PLL--YKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEG----- 167
P L Y Y H R WV R G ++GVD++ YR P H+E+ +LV+
Sbjct: 399 RTDDPFLVHYVVYHHFRSLGWVPREGVKFGVDWLLYRRGPVFDHAEFGLLVIPSYSNPAW 458
Query: 168 ---EDGENGRLRVWSDIHCTVRLCGGVAKTLLILTIN---KNGQGTAT------PSCLEQ 215
E R W +H R+ V K+++++ ++ + G+ + L+Q
Sbjct: 459 TGLERKAPQRQPSWHWLHGVQRVLSHVLKSMVLVYVDIPPPSAIGSVSDVESGISGLLKQ 518
Query: 216 YAVEERTISRWSPEQCR 232
Y V E + RWS + R
Sbjct: 519 YRVREVMVRRWSSNRNR 535
>gi|294657704|ref|XP_460005.2| DEHA2E16170p [Debaryomyces hansenii CBS767]
gi|199432887|emb|CAG88258.2| DEHA2E16170p [Debaryomyces hansenii CBS767]
Length = 369
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 23/177 (12%)
Query: 71 DKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRK 130
D ++ QL E F+L +L + I + + ++ E + + +F L Y Y H R
Sbjct: 202 DLEYLQLQKTEVFFLRFALNVINI--DLSLSQLFSECCERDISPNNSFILEYVVYHHYRS 259
Query: 131 KNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGG 190
W VRSG ++G D + Y+ P H+E+A+L++++ WS I R+ GG
Sbjct: 260 LGWCVRSGIKFGCDMLLYKRGPPFSHAEHAILIMSDSHHD-------WSSISSISRVIGG 312
Query: 191 VAKTLLILTINK------NGQGTATPSC--------LEQYAVEERTISRWSPEQCRE 233
V K L++ I+ + ++ SC + Y + E RW P + R+
Sbjct: 313 VKKNLVLTFIDGPTTEEFDAVVNSSYSCANEKLYNIFKLYKITEILYRRWIPSRNRD 369
>gi|348540555|ref|XP_003457753.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-like
[Oreochromis niloticus]
Length = 439
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L +SL CL + + + +LW+ ++ + F Y AY H R K
Sbjct: 268 EYLQLSLEEAFFLVYSLGCLSVYLQQKPL-SIVQLWRTFRSLRPDFVSSYAAYHHFRSKG 326
Query: 133 WVVR--SGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGE-DGENGRLRVWSDIHCTVRLCG 189
WV + G++YGVD + PS S V+ A+ R W + R+
Sbjct: 327 WVPKGGGGTKYGVDLRSIPLSPSSSRSYSVVIERADDAFRASPLRPFSWRSLAALSRITA 386
Query: 190 GVAKTLL----ILTINKNGQGTATPSCLEQYAVEERTISRW--SPEQCRED 234
V+K L+ I + + +P CL + V+E +SRW S E+ +D
Sbjct: 387 NVSKELMLCYVIYPADLSEAELDSPVCLSRLKVQEVIVSRWVSSRERAEQD 437
>gi|170593865|ref|XP_001901684.1| tRNA-splicing endonuclease subunit SEN2 [Brugia malayi]
gi|158590628|gb|EDP29243.1| tRNA-splicing endonuclease subunit SEN2, putative [Brugia malayi]
Length = 150
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 79 MEEGFYLCHSLKCLKIVGEDNSTKNDDELWQ-YMKAKKETFPLLYKAYSHLRKKNWVVRS 137
MEE YL + L+I ++ DE+W+ + F Y Y + R + WVVRS
Sbjct: 1 MEEAMYLSAEIGVLQISADNGQGCMPDEVWKTFFGCYGIRFVRRYATYRYFRHQGWVVRS 60
Query: 138 GSQYGVDFVAYRHHPSLVHSEYAVLVLAEG 167
G GVDF+ YR P HS AV ++++G
Sbjct: 61 GIHCGVDFMLYRDGPEYYHSSAAVRIVSKG 90
>gi|281210384|gb|EFA84550.1| hypothetical protein PPL_01539 [Polysphondylium pallidum PN500]
Length = 599
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 52/122 (42%), Gaps = 34/122 (27%)
Query: 76 QLGMEEGFYLCHSLKCLKIVGEDNSTKNDD------------------------------ 105
QL + E FYL + L CL I+ E + + ++
Sbjct: 315 QLSLYEAFYLLYGLGCLTILREPTTEEVNEYKNNIESSNNSNNNDSLNSSNHKNKKILTS 374
Query: 106 ----ELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAV 161
E W+ + + F Y AY H R W+ RSG +YG DFV Y+ P LVH++Y V
Sbjct: 375 MTIEECWKLFNEEDDRFLPNYIAYHHFRSTGWIPRSGLKYGCDFVLYKLRPELVHAQYQV 434
Query: 162 LV 163
+V
Sbjct: 435 VV 436
>gi|388852118|emb|CCF54294.1| related to tRNA splicing endonuclease beta subunit [Ustilago
hordei]
Length = 536
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 79/216 (36%), Gaps = 54/216 (25%)
Query: 71 DKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTK----NDDELWQY---------------- 110
D + QL + E F+L CL I D ++ D+ + Y
Sbjct: 320 DVERMQLSLVEAFFLSAMFGCLDICTSDGTSAIKILTLDKFYTYCLQSSLPQALLDLRDR 379
Query: 111 ----------MKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYA 160
F L Y AY H R WVV++G ++ D + Y+ P H+E+A
Sbjct: 380 GLAERHLQKLYTRPDNPFLLNYVAYHHFRSLGWVVKTGIKFCADLLLYKRGPVFSHAEFA 439
Query: 161 VLVLAEGEDGE-----------NGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGTAT 209
V+++ ED E N + W+ R+ V KTL++ + +
Sbjct: 440 VVIIPSYEDAEEEQSSPFPPHPNAGEKDWTWFSTVNRVQSQVLKTLILAHVFVPSLKRCS 499
Query: 210 PSCL-------------EQYAVEERTISRWSPEQCR 232
P L + YAV+E I RW P + +
Sbjct: 500 PEMLASPDAFFEGLRQGKTYAVKEVAIRRWVPARMK 535
>gi|388579450|gb|EIM19773.1| hypothetical protein WALSEDRAFT_70304 [Wallemia sebi CBS 633.66]
Length = 393
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 30/189 (15%)
Query: 76 QLGMEEGFYLCHSLKCLKIVG-EDNSTKNDDELWQYMKAKKETF------------PLL- 121
QL ++E F+L + CL+I+ + + ++ +LW+ + T P L
Sbjct: 205 QLTLQEAFFLAWGVGCLRIIDPQKDIFMSNRQLWKEFRYLPITLDSNSVNIDRLDNPFLV 264
Query: 122 -YKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDG---------- 170
Y Y H R WV++SG ++ VD V Y+ P H+E+AV++ ED
Sbjct: 265 NYAVYHHYRSLGWVIKSGIKFCVDMVLYKRGPVFHHAEFAVVICPTYEDEADKSTSPFKL 324
Query: 171 ENGRLRVWSDIHCTVRLCGGVAKTLLILTI----NKNGQGTATPS-CLEQYAVEERTISR 225
N W ++ R+ KTL++ + K + P+ L++Y V+E I R
Sbjct: 325 HNTDELSWQWLNTINRVNSQAKKTLILAYVEIPSKKRVENIDEPTEVLKEYNVKEVVIKR 384
Query: 226 WSPEQCRED 234
+ + R++
Sbjct: 385 FVAARNRDN 393
>gi|195385918|ref|XP_002051651.1| GJ16733 [Drosophila virilis]
gi|194148108|gb|EDW63806.1| GJ16733 [Drosophila virilis]
Length = 244
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 89/187 (47%), Gaps = 21/187 (11%)
Query: 55 LLNRACFGRH------IVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELW 108
L + C+G+ V+ E D+ LG+EE L + L L+I ++ W
Sbjct: 54 LHDNGCYGKGSASRGGPVSGEADETLL-LGLEEACLLGYYLGVLEI----RDMLGNELSW 108
Query: 109 Q-YMKAKKE-TFPLLYK--AYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVL 164
Q Y++A + +YK +Y +L+ KNW+++SG ++G DF+ Y+ P H+ + VLV
Sbjct: 109 QAYVQAALDYDRQFIYKLASYLYLKSKNWIIKSGIKFGGDFLIYKQGPRQYHASFLVLVQ 168
Query: 165 AEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQ----GTATPSCLEQYAVEE 220
G+ V ++ R+ K +LIL +N+ TP+ L+ +EE
Sbjct: 169 VSGDAMHTH--YVAKNLKGVQRVAETSDKDVLILRLNQLNDDFDPALCTPASLQSLTIEE 226
Query: 221 RTISRWS 227
I R++
Sbjct: 227 TVIRRFN 233
>gi|390596784|gb|EIN06185.1| hypothetical protein PUNSTDRAFT_73149 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 408
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 39/200 (19%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKND-----DELWQYMKA----------- 113
+D + QL + E F+L +L CL I+ +STK + D + +A
Sbjct: 212 EDLEHLQLTLPEAFFLSWALDCLTII---DSTKLEPLSLSDIYMSFHEAHIDVPSPPDTK 268
Query: 114 ----KKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGED 169
F L Y Y H R WVV+ G ++ VD++ Y+ P H+E+A+++ E
Sbjct: 269 PPLRPDNPFLLHYVLYHHYRSLGWVVKGGIKFCVDYLLYKRGPVFHHAEFALVLCPVYEA 328
Query: 170 G----------ENGRLRVWSDIHCTVRLCGGVAKTLLILTIN------KNGQGTATPSCL 213
+N WS + R+ V KTL+++ + + + +P+ L
Sbjct: 329 PADRSSSPFTLQNVDPFEWSWLSTINRVNSQVHKTLILVYVTIPALSRLDPEVLRSPAVL 388
Query: 214 EQYAVEERTISRWSPEQCRE 233
Y++ E TI R+ P + R+
Sbjct: 389 AHYSIREVTIRRFIPARMRD 408
>gi|289743021|gb|ADD20258.1| tRNA splicing endonuclease SEN2 [Glossina morsitans morsitans]
Length = 246
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 96/220 (43%), Gaps = 27/220 (12%)
Query: 28 FLSIQSEAHAVLAGYSALLAVEAEQTELLNRACFGR-----------HIVTAEKDKQWYQ 76
F + E + G S + A+ EL +G+ I +A + + Y+
Sbjct: 22 FPTADKELIGIFTGLSVEVCENADIIELYTNGNYGKGTKSRSTPQIIRIESATHNLERYE 81
Query: 77 ----LGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKET----FPLLYKAYSHL 128
L +EE F+L + LK L I N+ +++ W M + ET F AY +L
Sbjct: 82 ETLALSLEEAFFLSYYLKVLTI----NNIQDERLEWFEMLQECETINRKFVCNLAAYIYL 137
Query: 129 RKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLC 188
+ K W+V+SG ++G +F+ YR P H+ +AVL+ E + V +I R+
Sbjct: 138 KSKCWIVKSGLKFGSNFLIYRKGPRFYHASFAVLISCNNEACAH---LVAKNIKGLQRIA 194
Query: 189 GGVAKTLLILTINKNGQGTA-TPSCLEQYAVEERTISRWS 227
K +L+L + K + + + A+ E I R++
Sbjct: 195 ETSDKDILLLDVTKPSDFQMRSLEDISRLAISESVIRRFN 234
>gi|346318295|gb|EGX87899.1| tRNA-splicing endonuclease subunit Sen2, putative [Cordyceps
militaris CM01]
Length = 520
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 81/192 (42%), Gaps = 30/192 (15%)
Query: 71 DKQWYQLGMEEGFYLCHSLKCLKIV----GEDNSTKNDDELWQ---YMKAKK-------- 115
+K+ QL EE F+L L L I G D ST L++ Y +
Sbjct: 329 NKEHLQLTPEEAFFLNFGLGALSITDPYSGLDMSTMELLRLFREHSYSPPRNGPDADDLQ 388
Query: 116 --ETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDG--- 170
++F + Y Y H R WV R+G ++GVD++ Y P H+E+ ++++
Sbjct: 389 PDDSFLVHYVVYHHFRSLGWVPRAGIKFGVDWLLYARGPVFDHAEFGLIIVPSYSHSWWK 448
Query: 171 ---ENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQG-------TATPSCLEQYAVEE 220
+ + W+ +H VR+ V K+L+++ ++ L+ Y V E
Sbjct: 449 AHWKRAETKSWAWLHSVVRVLSHVTKSLVLVYVDVPPPPIFDAAITAGLTDALKLYKVRE 508
Query: 221 RTISRWSPEQCR 232
+ RW+ + R
Sbjct: 509 IMVKRWAANRNR 520
>gi|156936915|ref|YP_001434711.1| tRNA intron endonuclease [Ignicoccus hospitalis KIN4/I]
gi|156565899|gb|ABU81304.1| tRNA intron endonuclease [Ignicoccus hospitalis KIN4/I]
Length = 180
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 82/177 (46%), Gaps = 19/177 (10%)
Query: 37 AVLAGYSALLAVEAEQTELLNRACFGRHIVT-----AEKDKQWYQLGMEEGFYLCHS-LK 90
A L G ++ +A ++ ++ FG + T E K L E YL + +
Sbjct: 4 AYLVGDRVVVLDDAAAKDIYSKGFFGHPLGTEKPKGPEDVKAPLALSPLEALYLLETGVI 63
Query: 91 CLKIVGEDNSTKNDD--ELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAY 148
++ + D S ++ E+W++M+ +E Y Y LR K +VVRSG +YG DFV Y
Sbjct: 64 EIRDITTDKSYSPEELKEIWKFMEGLEEK----YLVYKELRNKGFVVRSGLKYGSDFVVY 119
Query: 149 RHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQ 205
P + H+ Y V VL +G + S+I R+ GV K I+ I +NG
Sbjct: 120 EFGPGIDHAPYVVDVLEKGTSLDP------SEIVKGGRVAHGVRKR-YIMAIVENGS 169
>gi|225557179|gb|EEH05466.1| BRCT domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 2025
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 31/156 (19%)
Query: 71 DKQWYQLGMEEGFYLCHSLKCLKIVGEDNST----KNDDELWQ---YMKAKKETFP---- 119
+++ QL EE F+L L L++ D ++ + L++ Y ++ + P
Sbjct: 294 NQEHLQLSNEEAFFLVFCLGVLQVYDNDRTSILPATSLLSLFRRHSYFPPREPSVPEKPD 353
Query: 120 ----LLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDG----- 170
L Y Y H R WV+RSG ++GVD++ Y P H+E+AV +L D
Sbjct: 354 DPFLLSYVVYHHFRSLGWVIRSGVKFGVDYLLYNRGPVFSHAEFAVCLLPAYSDPYWTAT 413
Query: 171 ---------ENGRLRVWSDIHCTVRLCGGVAKTLLI 197
+ GR W +HC R+ V K+L++
Sbjct: 414 AEKRQKTAKKEGRTWWW--LHCVNRVQAQVKKSLVL 447
>gi|229585200|ref|YP_002843702.1| tRNA-splicing endonuclease subunit alpha [Sulfolobus islandicus
M.16.27]
gi|238620160|ref|YP_002914986.1| tRNA-splicing endonuclease subunit alpha [Sulfolobus islandicus
M.16.4]
gi|385773637|ref|YP_005646203.1| archaeal intron splicing enzyme, alpha subunit [Sulfolobus
islandicus HVE10/4]
gi|385776273|ref|YP_005648841.1| archaeal intron splicing enzyme, alpha subunit [Sulfolobus
islandicus REY15A]
gi|259645860|sp|C3N6N2.1|ENDA_SULIA RecName: Full=tRNA-splicing endonuclease; AltName: Full=tRNA-intron
endonuclease
gi|259645861|sp|C4KIA4.1|ENDA_SULIK RecName: Full=tRNA-splicing endonuclease; AltName: Full=tRNA-intron
endonuclease
gi|228020250|gb|ACP55657.1| tRNA intron endonuclease [Sulfolobus islandicus M.16.27]
gi|238381230|gb|ACR42318.1| tRNA intron endonuclease [Sulfolobus islandicus M.16.4]
gi|323475021|gb|ADX85627.1| archaeal intron splicing enzyme, alpha subunit [Sulfolobus
islandicus REY15A]
gi|323477751|gb|ADX82989.1| archaeal intron splicing enzyme, alpha subunit [Sulfolobus
islandicus HVE10/4]
Length = 182
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 68/138 (49%), Gaps = 6/138 (4%)
Query: 37 AVLAGYSALLAVEAEQTELLNRACFGRHIVTAE----KDK-QWYQLGMEEGFYLCHSLKC 91
A+L G L+ E + + +G+ I ++ KD + +L + E YL
Sbjct: 4 ALLVGSKVLIPNVDESRYIYSNGFYGKAIGISKPKGPKDIIRPLELSLIESVYLAKK-GL 62
Query: 92 LKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHH 151
+K++ ++ ++L++Y F ++Y+ Y LR+K ++VRSG +YG DF Y
Sbjct: 63 IKVIDKNGEVLEYEKLYEYSSKIINKFDIMYRVYEDLREKGFIVRSGVKYGADFAVYTLG 122
Query: 152 PSLVHSEYAVLVLAEGED 169
P L H+ Y V+ + E+
Sbjct: 123 PGLEHAPYVVIAVDIDEE 140
>gi|159484009|ref|XP_001700053.1| predicted protein [Chlamydomonas reinhardtii]
gi|158281995|gb|EDP07749.1| predicted protein [Chlamydomonas reinhardtii]
Length = 175
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 80/198 (40%), Gaps = 50/198 (25%)
Query: 36 HAVLAGYSALLAVEAEQTELLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIV 95
HA+L LAV E E+LN+ C G Q Y+L + G + + + ++++
Sbjct: 28 HALLQHGGIWLAVPPELGEVLNQCCTG----------QVYEL--QPGAPIPATSEHVQLL 75
Query: 96 GEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLV 155
E LW +A + F Y AY HL+ K W+ RSG YGVD+V +
Sbjct: 76 DEQG-------LWDACRAIRSNFVTSYAAYHHLKAKGWIPRSGLLYGVDYVVVK------ 122
Query: 156 HSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGTATPSCLEQ 215
+ +L L E + G ATP+CL+
Sbjct: 123 --KLILLYLYEQQ-----------------------QPQQPGGQQQPGGPDHATPACLQN 157
Query: 216 YAVEERTISRWSPEQCRE 233
+ VEER + RW P+ R+
Sbjct: 158 FLVEERIVRRWVPDATRD 175
>gi|354547480|emb|CCE44214.1| hypothetical protein CPAR2_400150 [Candida parapsilosis]
Length = 390
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 56/133 (42%), Gaps = 17/133 (12%)
Query: 118 FPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGED-GENGRLR 176
F + Y Y + R K W VRSG ++G D++ Y+ P H+E+ V V+ + +D +
Sbjct: 258 FIINYIVYHYFRSKGWCVRSGIKFGTDYLLYKRGPPFSHAEFCVSVMQDEDDYTADVSAY 317
Query: 177 VWSDIHCTVRLCGGVAKTLLILTINKNGQ----------------GTATPSCLEQYAVEE 220
W I R+ G V K + + + Q G L +Y V E
Sbjct: 318 DWLQICAKARVIGSVKKNFVQVYVEAPSQIEFDEIWTSSGDEVDEGLMFKQLLSKYRVSE 377
Query: 221 RTISRWSPEQCRE 233
RW+P + R+
Sbjct: 378 VLYKRWNPSRTRD 390
>gi|389624903|ref|XP_003710105.1| hypothetical protein MGG_15480 [Magnaporthe oryzae 70-15]
gi|351649634|gb|EHA57493.1| hypothetical protein MGG_15480 [Magnaporthe oryzae 70-15]
gi|440463986|gb|ELQ33497.1| hypothetical protein OOU_Y34scaffold00936g24 [Magnaporthe oryzae
Y34]
gi|440484010|gb|ELQ64210.1| hypothetical protein OOW_P131scaffold00739g3 [Magnaporthe oryzae
P131]
Length = 512
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 76/192 (39%), Gaps = 35/192 (18%)
Query: 76 QLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFP---------------- 119
QL +E FYL ++ L +V + ++ A FP
Sbjct: 321 QLSAQEAFYLSFAIGALAVVDPKTQAIMSNLELLHLFADHYYFPPRLPSHASSGLRTDDP 380
Query: 120 --LLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAE--------GED 169
+ Y Y H R WV R G ++GVD + YR P H+E+ ++VL E
Sbjct: 381 FLVHYVVYHHFRSLGWVPREGVKFGVDLLLYRRGPVFDHAEFGLVVLPSYSHPDWNLEER 440
Query: 170 GENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGT----ATPS-----CLEQYAVEE 220
+ W +H R+ V K+L+++ ++ T + P+ LE+Y V E
Sbjct: 441 KHPQQHLSWFWLHGIQRVLSHVLKSLVLVYVDIPPPSTVDLVSDPNKGIVGLLERYKVRE 500
Query: 221 RTISRWSPEQCR 232
+ RWS + R
Sbjct: 501 VMVRRWSSNRNR 512
>gi|227827933|ref|YP_002829713.1| tRNA-splicing endonuclease subunit alpha [Sulfolobus islandicus
M.14.25]
gi|259645863|sp|C3MWW5.1|ENDA_SULIM RecName: Full=tRNA-splicing endonuclease; AltName: Full=tRNA-intron
endonuclease
gi|227459729|gb|ACP38415.1| tRNA intron endonuclease [Sulfolobus islandicus M.14.25]
Length = 182
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 68/138 (49%), Gaps = 6/138 (4%)
Query: 37 AVLAGYSALLAVEAEQTELLNRACFGRHIVTAE----KDK-QWYQLGMEEGFYLCHSLKC 91
A+L G L+ E + + +G+ I ++ KD + +L + E YL
Sbjct: 4 ALLVGSKVLIPNVDESRYIYSTGFYGKAIGISKPKGPKDIIRPLELSLIESVYLAKK-GL 62
Query: 92 LKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHH 151
+K++ ++ ++L++Y F ++Y+ Y LR+K ++VRSG +YG DF Y
Sbjct: 63 IKVIDKNGEVLEYEKLYEYSSKIINKFDIMYRVYEDLREKGFIVRSGVKYGADFAVYTLG 122
Query: 152 PSLVHSEYAVLVLAEGED 169
P L H+ Y V+ + E+
Sbjct: 123 PGLEHAPYVVIAVDIDEE 140
>gi|164655154|ref|XP_001728708.1| hypothetical protein MGL_4187 [Malassezia globosa CBS 7966]
gi|159102591|gb|EDP41494.1| hypothetical protein MGL_4187 [Malassezia globosa CBS 7966]
Length = 312
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 26/129 (20%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKND----------DELWQY--------- 110
+D + +QL M E F+L L CL++ + + + D L+Q
Sbjct: 150 QDVEHFQLTMIEAFFLAAMLGCLEVHDVNGHVRANLHANQKCLSLDTLYQLCMISYLPRF 209
Query: 111 -----MKAKKETFPLL--YKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV 163
+K + P L Y Y H R WVV+SG+++ VDF+ Y+ P H+E++VLV
Sbjct: 210 DAHNQLKWVRPDNPFLLSYVVYHHFRSLGWVVKSGTKFCVDFLLYKRGPVFSHAEFSVLV 269
Query: 164 LAEGEDGEN 172
+ E E+ ++
Sbjct: 270 IPEYENEQD 278
>gi|123468468|ref|XP_001317452.1| tRNA intron endonuclease, catalytic C-terminal domain containing
protein [Trichomonas vaginalis G3]
gi|121900186|gb|EAY05229.1| tRNA intron endonuclease, catalytic C-terminal domain containing
protein [Trichomonas vaginalis G3]
Length = 181
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 76/178 (42%), Gaps = 24/178 (13%)
Query: 52 QTELLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYM 111
+ EL+ + FGR + EK L E F+L K + I + N ELW
Sbjct: 20 RNELVQKFAFGRML--GEK----CILSAYEVFFLYDVCKSVNI------SFNRKELWDIC 67
Query: 112 K--AKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGED 169
++ F Y Y + R WVVR GS +G +FV Y HP +VHS + V +L ++
Sbjct: 68 SGLSQNGIFARNYSVYRYYRSLLWVVRDGSVFGCEFVLYHDHPEVVHSSFIVRILENWDN 127
Query: 170 GENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGT--ATPSCLEQYAVEERTISR 225
EN L T+ G K IL + K+ + P ++ + +E + R
Sbjct: 128 FENEAL--------TITRIGWFLKKRGILCVVKHTDNIDYSDPDSVDLFEIESFIVKR 177
>gi|451992234|gb|EMD84744.1| hypothetical protein COCHEDRAFT_1149984 [Cochliobolus
heterostrophus C5]
gi|451999985|gb|EMD92447.1| hypothetical protein COCHEDRAFT_1174419 [Cochliobolus
heterostrophus C5]
Length = 470
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 23/144 (15%)
Query: 113 AKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLA------- 165
A F L Y + H R WVVR G ++ VD++ Y P+ H+E+A++++
Sbjct: 327 APDNPFLLKYVVFHHFRSLGWVVRPGIKFAVDYLLYMRGPAFTHAEFAIMIIPSYSAPYW 386
Query: 166 -EGEDGE----NGRLRVWSDIHCTVRLCGGVAKTLLILTINK-----------NGQGTAT 209
E E + + + W H R+ V KTL+++ + G
Sbjct: 387 NENPGSESTIADKQRKDWWWFHRVNRVQTQVMKTLMLVYVEVPEPWDTSATELGGFKVDI 446
Query: 210 PSCLEQYAVEERTISRWSPEQCRE 233
S L++Y V E RWSP + R+
Sbjct: 447 GSVLKKYKVREFVFKRWSPSRNRD 470
>gi|444705528|gb|ELW46950.1| tRNA-splicing endonuclease subunit Sen2 [Tupaia chinensis]
Length = 419
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 106 ELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLV-- 163
+LW+ A + TF Y AY + R K WV + G +YG D + YR P H+ Y+V+V
Sbjct: 311 DLWRAFPAAQPTFRTTYMAYHYFRSKGWVPKVGLKYGTDLLLYRKGPPFYHASYSVIVEL 370
Query: 164 LAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLI 197
+ + +G R W + R+ V+K +L+
Sbjct: 371 VDDHFEGSLRRPFSWKSLAALSRVSVNVSKEVLL 404
>gi|71013033|ref|XP_758550.1| hypothetical protein UM02403.1 [Ustilago maydis 521]
gi|46098208|gb|EAK83441.1| hypothetical protein UM02403.1 [Ustilago maydis 521]
Length = 496
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 78/216 (36%), Gaps = 54/216 (25%)
Query: 71 DKQWYQLGMEEGFYLCHSLKCLKI-VGEDNSTKNDDELWQYMKA---------------- 113
D + QL + E F+L CL I GE + EL + K
Sbjct: 280 DFERMQLSLVEAFFLSSMFGCLDIHTGEGSVDAQPLELDDFYKECLLSRLPQTLLDLRER 339
Query: 114 -------------KKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYA 160
F + Y AY H R W V++G ++ VD + Y+ P H+E+A
Sbjct: 340 GLADRYLTKLYARPDNPFLIDYVAYHHFRSLGWTVKTGVKFCVDMLLYKRGPVFSHAEFA 399
Query: 161 VLVLAEGEDGE-----------NGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGTAT 209
V+V+ ED + N + W+ R+ V KTL++ +
Sbjct: 400 VVVIPSYEDAQDQESSPFALHPNAGRKDWTWFSTINRVQSQVLKTLILAHVFVPSSKRCR 459
Query: 210 PSCL-------------EQYAVEERTISRWSPEQCR 232
P L + YAV+E I RW P + +
Sbjct: 460 PETLATPEAFFTSLREGKSYAVKEVAIRRWVPARMK 495
>gi|15920559|ref|NP_376228.1| tRNA-splicing endonuclease subunit alpha [Sulfolobus tokodaii str.
7]
gi|54035951|sp|Q975R3.1|ENDA_SULTO RecName: Full=tRNA-splicing endonuclease; AltName: Full=tRNA-intron
endonuclease
gi|342306159|dbj|BAK54248.1| RNA splicing endonuclease alpha subunit [Sulfolobus tokodaii str.
7]
Length = 180
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Query: 67 TAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDE-LWQYMKAKKETFPLLYKAY 125
+AE+ L + EG YL K L+IV N + D E L+Q + F +LY Y
Sbjct: 38 SAEEINSELILSLIEGVYLVKKGK-LEIV--SNGERLDFERLYQIGVTQIPRFRILYSVY 94
Query: 126 SHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAE 166
LR+K +VVRSG +YG DF Y P + H+ Y V+ L E
Sbjct: 95 EDLREKGYVVRSGIKYGADFAVYTIGPGIEHAPYLVIALDE 135
>gi|83754882|pdb|2CV8|A Chain A, Crystal Structure Of Trna-Intron Endonuclease From
Sulfolobus Tokodaii
gi|83754883|pdb|2CV8|B Chain B, Crystal Structure Of Trna-Intron Endonuclease From
Sulfolobus Tokodaii
Length = 180
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Query: 67 TAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDE-LWQYMKAKKETFPLLYKAY 125
+AE+ L + EG YL K L+IV N + D E L+Q + F +LY Y
Sbjct: 38 SAEEINSELILSLIEGVYLVKKGK-LEIV--SNGERLDFERLYQIGVTQIPRFRILYSVY 94
Query: 126 SHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAE 166
LR+K +VVRSG +YG DF Y P + H+ Y V+ L E
Sbjct: 95 EDLREKGYVVRSGIKYGADFAVYTIGPGIEHAPYLVIALDE 135
>gi|70606648|ref|YP_255518.1| tRNA-splicing endonuclease subunit alpha [Sulfolobus acidocaldarius
DSM 639]
gi|449066870|ref|YP_007433952.1| tRNA-splicing endonuclease subunit alpha [Sulfolobus acidocaldarius
N8]
gi|449069142|ref|YP_007436223.1| tRNA-splicing endonuclease subunit alpha [Sulfolobus acidocaldarius
Ron12/I]
gi|76364181|sp|Q4JAF4.1|ENDA_SULAC RecName: Full=tRNA-splicing endonuclease; AltName: Full=tRNA-intron
endonuclease
gi|68567296|gb|AAY80225.1| tRNA-intron endonuclease [Sulfolobus acidocaldarius DSM 639]
gi|449035378|gb|AGE70804.1| tRNA-splicing endonuclease subunit alpha [Sulfolobus acidocaldarius
N8]
gi|449037650|gb|AGE73075.1| tRNA-splicing endonuclease subunit alpha [Sulfolobus acidocaldarius
Ron12/I]
Length = 181
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 67 TAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYS 126
+ E K+ L + E YL K ++++ D +D L++ F LLY Y
Sbjct: 39 SPEDIKKPLILSLIEALYLSKK-KIIEVI-RDGKVIDDALLYKIGMENIPRFELLYTVYE 96
Query: 127 HLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGED 169
LR+K +VVRSG +YG DF Y P L H+ Y V+ + E ++
Sbjct: 97 DLREKKFVVRSGMKYGADFAIYTVAPGLEHAPYLVIAIDEEQE 139
>gi|348665269|gb|EGZ05101.1| hypothetical protein PHYSODRAFT_534684 [Phytophthora sojae]
Length = 269
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 60/154 (38%), Gaps = 28/154 (18%)
Query: 106 ELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLA 165
+LW ++ TF + Y H R++ W + G YG FV YR + HSEY V V
Sbjct: 95 DLWGRFESCSATFTRHFVVYQHFRRQGWTPKPGLNYGAPFVLYRGSAAEFHSEYVVYVQD 154
Query: 166 EGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGTATPSCLE----------- 214
E W+ I R+ V KT+L+ T+ Q T+T + +
Sbjct: 155 SDEASS------WNTIQSLTRIAADVKKTVLLCTVTIE-QATSTIAADQPVTDLTFGSYS 207
Query: 215 ----QYAVEERTISRW------SPEQCREDPATV 238
QY VE I W SPE P V
Sbjct: 208 FHDVQYTVEAVAIRFWDAAVADSPESYAFQPQPV 241
>gi|400596788|gb|EJP64544.1| tRNA-splicing endonuclease subunit Sen2 [Beauveria bassiana ARSEF
2860]
Length = 522
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 84/192 (43%), Gaps = 30/192 (15%)
Query: 71 DKQWYQLGMEEGFYLCHSLKCLKIV----GEDNSTKNDDELWQ---YMKAKK-------- 115
+K+ QL +E F+L L L + G D ST + L++ Y +
Sbjct: 331 NKEHLQLTPQEAFFLKFGLGALSVTDPYSGLDLSTMDMLRLFREHSYAPPRNGPDADNLQ 390
Query: 116 --ETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAE------G 167
+ F + Y Y H R WV R+G ++GVD++ Y P H+++ ++++
Sbjct: 391 PDDPFLVHYVVYHHFRSLGWVPRAGIKFGVDWLLYNRGPVFDHAQFGLILVPSYSAPWWK 450
Query: 168 EDGENGRLRVWSDIHCTVRLCGGVAKTLLILTIN-------KNGQGTATPSCLEQYAVEE 220
+G+ + WS +H VR+ V K+L+++ ++ + L+ Y V E
Sbjct: 451 ANGKKPETKSWSWLHSVVRVLSHVTKSLVLVYVDVPPPPVFDEAIASGLTDALKLYKVRE 510
Query: 221 RTISRWSPEQCR 232
+ RW+ + R
Sbjct: 511 IMVKRWAANRNR 522
>gi|332796374|ref|YP_004457874.1| intron splicing enzyme subunit alpha [Acidianus hospitalis W1]
gi|332694109|gb|AEE93576.1| archaeal intron splicing enzyme, alpha subunit [Acidianus
hospitalis W1]
Length = 183
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 68 AEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSH 127
AE K +L + EG YL + ++++ N N+++L++ + F L+ YS
Sbjct: 41 AEDIKYPLELSLIEGLYLLKKGE-IEVIYNGNKL-NENDLYEIGRKNIARFDSLFTVYSD 98
Query: 128 LRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVL 164
LR K +VVRSG ++G DF Y P + H+ Y V+VL
Sbjct: 99 LRNKGFVVRSGIKFGADFAIYTLGPGIEHAPYVVIVL 135
>gi|348551456|ref|XP_003461546.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-like, partial
[Cavia porcellus]
Length = 428
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
++ QL +EE F+L ++L CL I + +LWQ A + TF Y AY + R K
Sbjct: 357 EYLQLSLEEAFFLVYALGCLSIYYKKEPL-TIRKLWQVFTAIRPTFRTTYGAYHYFRSKG 415
Query: 133 WVVRSGSQYGVDF 145
WV ++G +YG D
Sbjct: 416 WVPKAGLKYGTDL 428
>gi|363751877|ref|XP_003646155.1| hypothetical protein Ecym_4274 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889790|gb|AET39338.1| hypothetical protein Ecym_4274 [Eremothecium cymbalariae
DBVPG#7215]
Length = 364
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 80/196 (40%), Gaps = 22/196 (11%)
Query: 47 AVEAEQTELLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDE 106
+ E +++L G I+ EK +L E +L +L L I +D E
Sbjct: 182 GIRMEDSDILTED--GTGIIKLEK----LELMPVEAMFLTFALPVLDISMKDLLHSIFVE 235
Query: 107 LWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAE 166
+ + E + Y AY H R W VRSG ++G D++ YR P H+E++V+VL
Sbjct: 236 TPSFEQI--EALCMKYAAYHHYRSHGWCVRSGVKFGCDYMLYRQGPPFHHAEFSVMVLHH 293
Query: 167 GEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGT---------ATPSCLEQYA 217
+ + ++ R+ GG K L++ I+K + +
Sbjct: 294 NQAQHD-----YTWYSTVARVVGGAKKCLVLCYISKKAADDILMELWSRGSYAQAFALFE 348
Query: 218 VEERTISRWSPEQCRE 233
V E RW P + R+
Sbjct: 349 VNELVYRRWVPGKNRD 364
>gi|325184686|emb|CCA19177.1| hypothetical protein PITG_04879 [Albugo laibachii Nc14]
Length = 252
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 77 LGMEEGFYLCHSLKCLKI--VGEDNSTKNDDE-----LWQYMKAKKET--FPLLYKAYSH 127
L + E +Y K L I V ++ K D E LW + F + Y H
Sbjct: 56 LSLVEAYYEVAVTKRLSISNVELKDALKRDSESISLHLWTLFSSSLPDGRFISHFITYYH 115
Query: 128 LRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRL 187
R++ W+++SG YG +V YR P L HSEY + + N + W+ + RL
Sbjct: 116 FRQRAWLLKSGLNYGGHYVMYRGDPYLYHSEYIIYTI-------NDQAVSWNLVQAMTRL 168
Query: 188 CGGVAKTLLILTINKNGQ--GTATPSCLEQY 216
V KT+L+ ++ + + G+ +P C + +
Sbjct: 169 AVDVKKTVLLCSVKLSDEDPGSKSPDCSDTF 199
>gi|410730235|ref|XP_003671297.2| hypothetical protein NDAI_0G02770 [Naumovozyma dairenensis CBS 421]
gi|401780115|emb|CCD26054.2| hypothetical protein NDAI_0G02770 [Naumovozyma dairenensis CBS 421]
Length = 380
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 15/121 (12%)
Query: 122 YKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDI 181
Y +Y H R W VRSG ++G D++ Y+ P H+E+ ++ + D + W
Sbjct: 266 YVSYHHYRSHGWCVRSGIKFGCDYLLYKRGPPFQHAEFCIVTM----DAHTTKDYTW--Y 319
Query: 182 HCTVRLCGGVAKTLLILTINKNGQGTATPSCLEQ---------YAVEERTISRWSPEQCR 232
R+CGG KTL++ + + + L + Y + E T RW P + R
Sbjct: 320 SSIARVCGGARKTLVLCYVERLISEEKVMALLNKRDYAGIFSSYKINEVTYKRWVPGKNR 379
Query: 233 E 233
+
Sbjct: 380 D 380
>gi|393910319|gb|EJD75817.1| hypothetical protein LOAG_17102 [Loa loa]
Length = 258
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 76 QLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKET-FPLLYKAYSHLRKKNWV 134
+LG EE YL + L+I + D +W+ + F Y Y + R + WV
Sbjct: 106 RLGTEEAMYLSAEVGVLQIFANNGQECVPDVVWKIFYDRYGIRFVRRYATYRYFRLQGWV 165
Query: 135 VRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEG 167
VRSG GVDF+ YR P HS AV +++ G
Sbjct: 166 VRSGLHCGVDFMLYRDGPEYYHSSAAVRIVSIG 198
>gi|242022190|ref|XP_002431524.1| tRNA-splicing endonuclease subunit SEN2, putative [Pediculus
humanus corporis]
gi|212516818|gb|EEB18786.1| tRNA-splicing endonuclease subunit SEN2, putative [Pediculus
humanus corporis]
Length = 334
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%)
Query: 77 LGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVR 136
L EE +L ++L K+ E+ + DELW+ + F Y Y + R K W+V+
Sbjct: 223 LNFEETLFLNYALNYFKVHNENGVKLSIDELWEKFNKSQWNFFERYVIYHYYRTKGWIVK 282
Query: 137 SGSQYGVDFVAYRHHPSLVHSEYAVLVL 164
SG +YG D++ Y+ P H+ Y + +
Sbjct: 283 SGIKYGGDYLLYKEGPLYSHASYLIKIF 310
>gi|342319385|gb|EGU11334.1| tRNA-intron endonuclease [Rhodotorula glutinis ATCC 204091]
Length = 470
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 70/184 (38%), Gaps = 59/184 (32%)
Query: 76 QLGMEEGFYLCHSLKCLKIVGEDNSTKNDDE------------------LWQYMKAKKET 117
QL EE F+L ++ CL + G +++ + L + E+
Sbjct: 244 QLQPEEAFFLVFAIGCLALTGPSDTSPTASKRLSILETLRLFLLTSCPSLPPSLTLAPES 303
Query: 118 FPLL----------YKAYSHLRKKNWVVRSGSQYGVDFVAY-RHHPSLVHSEYAVLVLA- 165
P L Y AY H R WVVRSG ++ VD+V Y + P H+E+AV+++
Sbjct: 304 DPRLNRLDSPFFLSYAAYHHYRSMGWVVRSGVKFCVDWVLYGQGGPVGGHAEFAVVIVPT 363
Query: 166 -----------------------------EGEDGENGRLRVWSDIHCTVRLCGGVAKTLL 196
E GE R W H R+C GV KTL+
Sbjct: 364 YVNPADSASNPFRSTSTFAVDQDPDARDEEHRRGEGERKSSWKWFHTINRVCSGVKKTLV 423
Query: 197 ILTI 200
+L +
Sbjct: 424 LLHV 427
>gi|18313226|ref|NP_559893.1| tRNA-splicing endonuclease subunit alpha [Pyrobaculum aerophilum
str. IM2]
gi|54035949|sp|Q8ZVI1.1|ENDA_PYRAE RecName: Full=tRNA-splicing endonuclease; AltName: Full=tRNA-intron
endonuclease
gi|241913141|pdb|2ZYZ|B Chain B, Pyrobaculum Aerophilum Splicing Endonuclease
gi|241913143|pdb|2ZYZ|D Chain D, Pyrobaculum Aerophilum Splicing Endonuclease
gi|18160743|gb|AAL64075.1| tRNA intron endonuclease [Pyrobaculum aerophilum str. IM2]
Length = 183
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 74/173 (42%), Gaps = 18/173 (10%)
Query: 39 LAGYSALLAVEAEQTELLNR----ACFGRHIV-------TAEKDKQWYQLGMEEGFYLCH 87
+ GY LAV E E R +GR + EK LG+ E YL
Sbjct: 1 MIGYLRGLAVIVEDVEFARRLYKEGFYGRFLGYDKVKRDEVEKINAPLILGLYEALYLAE 60
Query: 88 SLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVA 147
+ LK++GED +EL + + F +YK Y + R +VV+SG ++G F
Sbjct: 61 KGR-LKVMGEDGREVAPEELAALGRERMRNFDEIYKIYKYFRDLGYVVKSGLKFGALFSV 119
Query: 148 YRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTI 200
Y P + H+ V+V E + G + +DI RL V KT + T+
Sbjct: 120 YEKGPGIDHAP-MVVVFLEPDKGISA-----TDITRGGRLSHSVRKTWTLATV 166
>gi|452823275|gb|EME30287.1| tRNA-intron endonuclease [Galdieria sulphuraria]
Length = 356
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 73/165 (44%), Gaps = 15/165 (9%)
Query: 76 QLGMEEGFYLCHSLKCLKIVGE-DNSTK--NDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
QL + E FY K L I + D TK + D + Y FP Y + +++
Sbjct: 182 QLCLWEAFYASFISKQLNIFDKTDPITKLTDPDRTYAYFCRLIPHFPYYLAIYCYYKERG 241
Query: 133 WVVRSGSQYGVDFVAYRHH-PSLVHSEYAVLVLAEGEDGENGRL--RVWSDIHCTVRLCG 189
W SG +YGVDFV Y S VHS + VLV +D L + W + +RL
Sbjct: 242 WSPHSGLKYGVDFVLYYGSVESHVHSPFCVLVDIHKDDSPGDCLLEKSWISLQNRLRLVK 301
Query: 190 GVAKTLLILTINKNGQGTAT-------PSCLEQYAVEERTISRWS 227
VAK LL++ + K +G A SCL + E + RW+
Sbjct: 302 QVAKQLLLVHVQKP-KGLADEILFSRWESCL-SLEISEMRVERWT 344
>gi|367015888|ref|XP_003682443.1| hypothetical protein TDEL_0F04210 [Torulaspora delbrueckii]
gi|359750105|emb|CCE93232.1| hypothetical protein TDEL_0F04210 [Torulaspora delbrueckii]
Length = 359
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 57/130 (43%), Gaps = 23/130 (17%)
Query: 118 FPLL--YKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRL 175
+PL+ Y AY H R W VRSG ++G D++ Y+ P H+++ + VL D E
Sbjct: 239 YPLVRQYVAYHHYRSHGWCVRSGIKFGCDYLLYKRGPPFQHAQFCITVL----DSEEYHD 294
Query: 176 RVWSDIHCTVRLCGGVAKTLL------------ILTINKNGQGTATPSCLEQYAVEERTI 223
W R+ GG KTL+ I+ + KNGQ + + E
Sbjct: 295 YTWYS--SAARVVGGAKKTLILCYVERMASEERIVELWKNGQFA---DVFSSFKIGEVIY 349
Query: 224 SRWSPEQCRE 233
RW P + R+
Sbjct: 350 RRWVPGKNRD 359
>gi|366991867|ref|XP_003675699.1| hypothetical protein NCAS_0C03440 [Naumovozyma castellii CBS 4309]
gi|342301564|emb|CCC69334.1| hypothetical protein NCAS_0C03440 [Naumovozyma castellii CBS 4309]
Length = 371
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 17/122 (13%)
Query: 122 YKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDI 181
Y AY H R W VRSG ++G D++ Y+ P H+E+ ++V+ D E R W
Sbjct: 257 YVAYHHYRSHGWCVRSGIKFGCDYILYKRGPPFQHAEFCIMVM----DAEVPRDYTW--- 309
Query: 182 HCTV-RLCGGVAKTLLILTINKNGQGTAT---------PSCLEQYAVEERTISRWSPEQC 231
+ TV R+ GG KT ++ + + + Y V E RW P +
Sbjct: 310 YSTVARVTGGARKTFVLCYVQRLVSQDKILEAWDRKDFTTIFSSYKVAEVIYKRWVPGKN 369
Query: 232 RE 233
R+
Sbjct: 370 RD 371
>gi|392579715|gb|EIW72842.1| hypothetical protein TREMEDRAFT_25866 [Tremella mesenterica DSM
1558]
Length = 450
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 80/209 (38%), Gaps = 45/209 (21%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDE------LWQYMKAKKETFPLL-- 121
+D + QL +EE ++L +L LKI +T L + PL
Sbjct: 242 EDMEHLQLALEEAWFLASALGVLKIYDPLTNTYPPPSAILPLFLTPFSPGLHPVVPLPVR 301
Query: 122 --------YKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENG 173
Y AY H R WVV+ G ++ D++ YR P+ HS ++ +V+ D E
Sbjct: 302 PDDPFLVSYVAYHHFRSLGWVVKPGIKFACDWLLYRRGPAFSHSAFSCVVIPVYSDLEEQ 361
Query: 174 RLRV------------WSDIHCTVRLCGGVAKTLLILTINKNGQGTATPS---------- 211
W ++ +R+ V KT++++ + PS
Sbjct: 362 AESPYGKEDWYVERCSWKWMNTIMRVNSLVQKTVILVYVTIPSTSAFPPSTQLSGGGLDW 421
Query: 212 -------CLEQYAVEERTISRWSPEQCRE 233
L +Y V E ++R+SP + R+
Sbjct: 422 RKINMSGILSRYTVREAALTRFSPARRRD 450
>gi|444319514|ref|XP_004180414.1| hypothetical protein TBLA_0D03980 [Tetrapisispora blattae CBS 6284]
gi|387513456|emb|CCH60895.1| hypothetical protein TBLA_0D03980 [Tetrapisispora blattae CBS 6284]
Length = 375
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 26/168 (15%)
Query: 81 EGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLL---YKAYSHLRKKNWVVRS 137
E +L SL L I ++ ++ + Q +K + LL Y Y H R + W VRS
Sbjct: 219 EAIFLTFSLPVLNISVQELCSRLVPKPVQNIKY--DDIQLLIRKYIVYHHYRSRGWCVRS 276
Query: 138 GSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLL- 196
G ++G +++ Y+ P H+E+ VLVL D E + W R+ GG K+L+
Sbjct: 277 GIKFGCEYLLYKRGPPFQHAEFCVLVL----DAEESQDYTWYS--SIARVIGGARKSLVL 330
Query: 197 -----------ILTINKNGQGTATPSCLEQYAVEERTISRWSPEQCRE 233
IL + K+G T ++ V E RW P + R+
Sbjct: 331 CYVHNELPEKNILQLWKSGNFT---ELFSKFNVGEIVYKRWVPGKNRD 375
>gi|428179029|gb|EKX47902.1| hypothetical protein GUITHDRAFT_106448 [Guillardia theta CCMP2712]
Length = 209
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 20/169 (11%)
Query: 77 LGMEEGFYLCHSLKCLKIVGEDNSTKNDD--ELWQYMKAKKETFPLLYKAYSHLRKKNWV 134
+ +EE FY L L+I + K D E W+ + F + Y H ++ W
Sbjct: 48 MSLEEAFYKAFILHELQIRAQGQEHKFIDRAEAWKLFSERSVEFQRNFIVYHHYSQREWR 107
Query: 135 VRSGSQYGVDFVAYRHHPSL-----VHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCG 189
+ G++YG F+ Y S H+ YAV +L +G + W + + RL G
Sbjct: 108 LIQGTKYGCSFLLYPKSESSNDDRHKHAPYAVQILPDGNN-----CMTWLGVQRSSRLAG 162
Query: 190 GVAKTLLILTIN------KNGQGTATPSCLEQYAVEERTISRWSPEQCR 232
V+K L+I +++ + + +C Q V E ++RW P + R
Sbjct: 163 QVSKELIIASVDYAATDRERSAISFEEAC--QAKVREIKVARWEPGRDR 209
>gi|343427616|emb|CBQ71143.1| related to tRNA splicing endonuclease beta subunit [Sporisorium
reilianum SRZ2]
Length = 536
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 59/139 (42%), Gaps = 24/139 (17%)
Query: 118 FPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGE------ 171
F + Y AY H R WVV++G ++ D + Y+ P H+E+AV+++ ED +
Sbjct: 397 FLINYVAYHHFRSLGWVVKTGIKFCADLLLYKRGPVFSHAEFAVIIIPSYEDAQDQESSP 456
Query: 172 -----NGRLRVWSDIHCTVRLCGGVAKTLLILTINKNG------QGTATPSCL------- 213
N + W R+ V K L++ + Q ATP
Sbjct: 457 FAPHPNAGRKDWIWFSTVNRVQSQVLKALILAHVFVPSVKRCPPQQLATPEAFFESLREG 516
Query: 214 EQYAVEERTISRWSPEQCR 232
+ YAV+E I RW P + +
Sbjct: 517 KSYAVKEVAIRRWVPARMK 535
>gi|323452645|gb|EGB08518.1| hypothetical protein AURANDRAFT_15827, partial [Aureococcus
anophagefferens]
Length = 125
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 118 FPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRV 177
F Y+H R K W+V+ G Q+G DFV YR P + H+EY V+V E +
Sbjct: 56 FDATLAVYAHFRDKKWIVKDGLQFGADFVLYRRSPDVFHAEYCVVV------AERDEIVP 109
Query: 178 WSDIHCTVRLCGGVAK 193
W RL V K
Sbjct: 110 WRRCKANARLSSDVRK 125
>gi|156846385|ref|XP_001646080.1| hypothetical protein Kpol_543p52 [Vanderwaltozyma polyspora DSM
70294]
gi|156116752|gb|EDO18222.1| hypothetical protein Kpol_543p52 [Vanderwaltozyma polyspora DSM
70294]
Length = 363
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 122 YKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDI 181
Y AY H R W VRSG ++G D++ Y+ P H+E+ V+VL D E W
Sbjct: 249 YVAYHHYRSHGWCVRSGIKFGCDYILYQRGPPFHHAEFCVMVL----DSEEKHDYTW--F 302
Query: 182 HCTVRLCGGVAKTLLILTINK 202
R+ GGV KT ++ I +
Sbjct: 303 SSIARVVGGVKKTFVLCYIER 323
>gi|448082523|ref|XP_004195160.1| Piso0_005705 [Millerozyma farinosa CBS 7064]
gi|359376582|emb|CCE87164.1| Piso0_005705 [Millerozyma farinosa CBS 7064]
Length = 377
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 74/191 (38%), Gaps = 46/191 (24%)
Query: 72 KQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKA-----------KKETFPL 120
K++ QL E F+L ++L + I D L + K + F L
Sbjct: 204 KEYLQLQATEVFFLRYALHTVDI---------DMTLLELFKKCAGVSSVASIEPRNNFVL 254
Query: 121 LYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSD 180
Y Y H R W VRSG ++G +F+ Y+ H+E+A+ ++ E W
Sbjct: 255 EYVVYHHYRSLGWCVRSGIKFGSNFLLYKRGLPFSHAEHAIYIMPEEVS--------WPT 306
Query: 181 IHCTVRLCGGVAKTLLIL---------------TINKNGQG---TATPSCLEQYAVEERT 222
I R+ GV K L+++ T+ + G + +QY V E
Sbjct: 307 ISALSRVVSGVKKNLVLVFVETPCQEVLDNLLHTLERMGNDHYKKNLSNIFKQYRVNELI 366
Query: 223 ISRWSPEQCRE 233
RW P + R+
Sbjct: 367 YRRWIPGRNRD 377
>gi|295666760|ref|XP_002793930.1| BRCT domain-containing protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226277583|gb|EEH33149.1| BRCT domain-containing protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1939
Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 15/106 (14%)
Query: 70 KDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFP---------- 119
K+++ QL EE F+L + L L++ D +T + + FP
Sbjct: 284 KNEEHLQLSNEEAFFLVYGLGVLQVYDSDRTTILTATSLLPLLRQHSYFPPRDSSMPGEP 343
Query: 120 -----LLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYA 160
L Y Y H R WV+RSG ++GVD++ Y P H+E+A
Sbjct: 344 DDPFILSYVIYHHFRSLGWVIRSGVKFGVDYLLYNRGPVFSHAEFA 389
>gi|430814297|emb|CCJ28441.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 1826
Score = 54.7 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 25/143 (17%)
Query: 76 QLGMEEGFYLCHSLKCLKI-VGEDNSTKN-------------------DDELWQYMKAKK 115
QL +EE F+L + L LKI + ++ K + + Q + A
Sbjct: 1433 QLHLEEAFFLSYGLGVLKIDISKEMGVKTSMDLLLLFCSLSSGLNMQVESRIKQPVHADN 1492
Query: 116 ETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRL 175
F + Y AY H R WVVR G ++ VD++ Y+ P HSE+ ++VL D
Sbjct: 1493 R-FLVSYVAYHHYRSLGWVVRPGVKFAVDWLLYKQGPIFSHSEFTIVVLPSYSDEVRKEK 1551
Query: 176 RV-WSDIHCTVRLCGGVAKTLLI 197
+ W +HC R+ V++T+++
Sbjct: 1552 ELSWYWLHCINRV---VSQTVVL 1571
>gi|328768894|gb|EGF78939.1| hypothetical protein BATDEDRAFT_90120 [Batrachochytrium
dendrobatidis JAM81]
Length = 3110
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 30/141 (21%)
Query: 62 GRHIVTAE--KDKQWYQLGMEEGFYL--CHSLKCLKIVGEDNSTKNDDELWQYMKAKKET 117
R + +E D + Y L MEE YL C K L++ G + +LWQ + +++
Sbjct: 71 ARMTIVSETSSDPEMYILMMEEAVYLVVCDQ-KLLQVRGSQGNILTIQDLWQQCRLARQS 129
Query: 118 --------FPLLYKAYSHLRKKNWVVRSGSQYGVDF-----------------VAYRHHP 152
F + + Y + + + W+V+SG +G D+ V YR P
Sbjct: 130 KATLDASEFAIQFAVYRYYQSQGWIVKSGHLFGADYGNTLLDCVSWQILTFYLVLYRDGP 189
Query: 153 SLVHSEYAVLVLAEGEDGENG 173
+ HSE+ +L LA+G + G
Sbjct: 190 TRKHSEFGMLPLADGNQKKAG 210
>gi|289192112|ref|YP_003458053.1| tRNA intron endonuclease [Methanocaldococcus sp. FS406-22]
gi|288938562|gb|ADC69317.1| tRNA intron endonuclease [Methanocaldococcus sp. FS406-22]
Length = 174
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 9/135 (6%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
+ L + E YL + L L++ +D+ + +EL++Y K +E L Y Y LR +
Sbjct: 36 NFLSLSLVEALYLVN-LGWLEVKNKDSKIMSFEELYEYAKNIEERLCLKYLVYKDLRTRG 94
Query: 133 WVVRSGSQYGVDFVAYRHHPSLV--HSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGG 190
++V++G +YG DF Y ++ HS Y V V E + S++ VR+
Sbjct: 95 YIVKTGLKYGADFRLYERGANIDKEHSVYLVKVFTEDSS------FLLSELTGFVRVAHS 148
Query: 191 VAKTLLILTINKNGQ 205
V K LLI ++ +G
Sbjct: 149 VRKKLLIAIVDADGD 163
>gi|305663771|ref|YP_003860059.1| tRNA intron endonuclease [Ignisphaera aggregans DSM 17230]
gi|304378340|gb|ADM28179.1| tRNA intron endonuclease [Ignisphaera aggregans DSM 17230]
Length = 185
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 75 YQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWV 134
+ L + YLC K + + N EL + +K L Y+ Y +LR + ++
Sbjct: 55 FILSTYDSIYLCR-----KNIADLNLNLRCQELLEKLKHMDRRLWLRYRVYEYLRDRGYI 109
Query: 135 VRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGED 169
VRSG ++G DF Y P L H+ Y V V+ E D
Sbjct: 110 VRSGIKFGTDFSVYELGPGLEHAPYVVTVIDENAD 144
>gi|374633236|ref|ZP_09705603.1| tRNA intron endonuclease [Metallosphaera yellowstonensis MK1]
gi|373524720|gb|EHP69597.1| tRNA intron endonuclease [Metallosphaera yellowstonensis MK1]
Length = 182
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 10/136 (7%)
Query: 67 TAEKDKQWYQLGMEEGFYLCHSLK-CLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAY 125
+ E+ K +L + EG YL K ++ G D ++ EL Y + F LY+ Y
Sbjct: 40 STEEIKTPLELSLIEGLYLLRKGKIAVRYKGNDV---DERELEDYAVKRIPRFRDLYRVY 96
Query: 126 SHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTV 185
L+++ +VVRSG ++G DF Y P + H+ + V V+ E+ L + + +
Sbjct: 97 EDLKRRGFVVRSGIKFGADFAVYTLGPGVEHAPFVVSVVNADEEMNATELMSYGRVSHST 156
Query: 186 RLCGGVAKTLLILTIN 201
R K L++ IN
Sbjct: 157 R------KKLILAIIN 166
>gi|385305555|gb|EIF49520.1| putative trna splicing endonuclease subunit [Dekkera bruxellensis
AWRI1499]
Length = 378
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 57/134 (42%), Gaps = 17/134 (12%)
Query: 113 AKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGEN 172
+ + F + + Y H + W V+SG ++ D+V Y+ P H+ +AV V+ +
Sbjct: 247 SPQNDFLIQFVVYMHYKSLGWCVKSGLKFSSDYVLYQRGPPFHHAAFAVTVM---NNTSK 303
Query: 173 GRLRVWSDIHCTVRLCGGVAKTLLILTINK----------NGQGTATPS----CLEQYAV 218
RL+ W+ R+ V KT+++ ++ N P L Y +
Sbjct: 304 QRLKNWTHFGSIFRVVSAVKKTMILCYVDSPSKEMFEQVWNSLDERDPEGLIRLLNLYTI 363
Query: 219 EERTISRWSPEQCR 232
+E RW+P + R
Sbjct: 364 QEIVYKRWTPSRTR 377
>gi|50311881|ref|XP_455972.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49645108|emb|CAG98680.1| KLLA0F19866p [Kluyveromyces lactis]
Length = 369
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 15/155 (9%)
Query: 46 LAVEAEQTELLN---RACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTK 102
LA E + ++ + R G+ ++ E QL E +L +++ LKI +
Sbjct: 182 LAFEKDSMQIRDEDLRLIEGKSVIQLES----LQLMPVEAIFLSYAVPVLKITLQQLMVS 237
Query: 103 NDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVL 162
E + KK Y AY H R K W VRSG ++G +++ YR P H+EY ++
Sbjct: 238 LVLEPKSFQDIKKLIHQ--YVAYHHYRSKGWCVRSGIKFGCEYLLYRRGPPFQHAEYGIM 295
Query: 163 VLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLI 197
VL D W R+ GG K ++
Sbjct: 296 VL----DANQSNDYTWYS--SAARVVGGAKKQFVL 324
>gi|315426913|dbj|BAJ48533.1| tRNA-intron endonuclease [Candidatus Caldiarchaeum subterraneum]
gi|315426956|dbj|BAJ48575.1| tRNA-intron endonuclease [Candidatus Caldiarchaeum subterraneum]
gi|343485633|dbj|BAJ51287.1| tRNA-intron endonuclease [Candidatus Caldiarchaeum subterraneum]
Length = 178
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 17/150 (11%)
Query: 49 EAEQTELLNRACF-GRHI-VTAEKDKQW---YQLGMEEGFYLCHSLKCLKIV--GEDNST 101
+ EQ L R F G+ + + KD + L + E YL K L+I+ G + S
Sbjct: 15 DVEQARQLYRLGFYGKPLGIPKPKDMNFDAPLVLDLVEALYLARQRK-LRILRGGVEVSP 73
Query: 102 KNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAV 161
K E +Y + + FP Y+ YS LR + +VV G ++G DF YRH P + H+ + +
Sbjct: 74 K---EFEEYASSVEPNFPTKYRVYSDLRDRGFVVLPGIKFGSDFAVYRHGPGIDHAPFII 130
Query: 162 LV------LAEGEDGENGRLRVWSDIHCTV 185
+ L+ E GRL H T+
Sbjct: 131 QIKKGDEKLSALEIIRAGRLATSVKKHFTI 160
>gi|15669615|ref|NP_248428.1| tRNA-splicing endonuclease subunit alpha [Methanocaldococcus
jannaschii DSM 2661]
gi|3913580|sp|Q58819.1|ENDA_METJA RecName: Full=tRNA-splicing endonuclease; AltName: Full=tRNA-intron
endonuclease
gi|1592074|gb|AAB99435.1| tRNA intron endonuclease (endA) [Methanocaldococcus jannaschii DSM
2661]
Length = 179
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 9/135 (6%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
+ L + E YL + L L++ +DN + +EL++Y + +E L Y Y LR +
Sbjct: 41 NFLSLSLVEALYLIN-LGWLEVKYKDNKPLSFEELYEYARNVEERLCLKYLVYKDLRTRG 99
Query: 133 WVVRSGSQYGVDFVAYRHHPSL--VHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGG 190
++V++G +YG DF Y ++ HS Y V V E + S++ VR+
Sbjct: 100 YIVKTGLKYGADFRLYERGANIDKEHSVYLVKVFPEDSS------FLLSELTGFVRVAHS 153
Query: 191 VAKTLLILTINKNGQ 205
V K LLI ++ +G
Sbjct: 154 VRKKLLIAIVDADGD 168
>gi|5107417|pdb|1A79|A Chain A, Crystal Structure Of The Trna Splicing Endonuclease From
Methanococcus Jannaschii
gi|5107418|pdb|1A79|B Chain B, Crystal Structure Of The Trna Splicing Endonuclease From
Methanococcus Jannaschii
gi|5107419|pdb|1A79|C Chain C, Crystal Structure Of The Trna Splicing Endonuclease From
Methanococcus Jannaschii
gi|5107420|pdb|1A79|D Chain D, Crystal Structure Of The Trna Splicing Endonuclease From
Methanococcus Jannaschii
Length = 171
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 9/135 (6%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
+ L + E YL + L L++ +DN + +EL++Y + +E L Y Y LR +
Sbjct: 33 NFLSLSLVEALYLIN-LGWLEVKYKDNKPLSFEELYEYARNVEERLCLKYLVYKDLRTRG 91
Query: 133 WVVRSGSQYGVDFVAYRHHPSL--VHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGG 190
++V++G +YG DF Y ++ HS Y V V E + S++ VR+
Sbjct: 92 YIVKTGLKYGADFRLYERGANIDKEHSVYLVKVFPEDSS------FLLSELTGFVRVAHS 145
Query: 191 VAKTLLILTINKNGQ 205
V K LLI ++ +G
Sbjct: 146 VRKKLLIAIVDADGD 160
>gi|296109525|ref|YP_003616474.1| tRNA intron endonuclease [methanocaldococcus infernus ME]
gi|295434339|gb|ADG13510.1| tRNA intron endonuclease [Methanocaldococcus infernus ME]
Length = 167
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 105 DELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVL 164
+EL+ Y K +E + Y Y LR + ++V++G +YG DF YR HSEY V V
Sbjct: 64 EELYLYAKEIEEYLCIKYLVYKDLRNRGYIVKTGLKYGSDFRLYRKMEE--HSEYLVRVF 121
Query: 165 AEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQ 205
ENG++ + +++ VR+ V K LLI ++ +G
Sbjct: 122 P-----ENGKIFI-NELTGFVRVAHSVRKKLLIAIVDDDGD 156
>gi|448622155|ref|ZP_21668849.1| tRNA splicing endonuclease [Haloferax denitrificans ATCC 35960]
gi|445754237|gb|EMA05642.1| tRNA splicing endonuclease [Haloferax denitrificans ATCC 35960]
Length = 339
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 64/154 (41%), Gaps = 17/154 (11%)
Query: 55 LLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAK 114
L R FG+ + D QL + E YL + L I D ++ D +
Sbjct: 189 LYQRGFFGQRLYGRNADSGPLQLSLLEAAYLARA-DALAIDEADVLSRGRD-------VE 240
Query: 115 KETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPS---LVHSEYAVLVLAEGEDGE 171
+ F Y+ LR N V +SG ++G DF Y S L HSE+ V V+A
Sbjct: 241 GDRFDRRLAVYAALRGANTVPKSGFKFGSDFRVYTEFESVSDLSHSEFLVRVVAPDH--- 297
Query: 172 NGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQ 205
V D+ VRL GGV K ++ + NG+
Sbjct: 298 ---TFVPRDLSLDVRLAGGVRKRMVFALTDDNGE 328
>gi|357478659|ref|XP_003609615.1| hypothetical protein MTR_4g119190 [Medicago truncatula]
gi|355510670|gb|AES91812.1| hypothetical protein MTR_4g119190 [Medicago truncatula]
Length = 66
Score = 53.5 bits (127), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/44 (54%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 77 LGMEEGFYLCHSLKCLKIVGE-DNSTKNDDELWQYMKAKKETFP 119
L +EE FYLC+SLKCLKI G+ D N++ELW+ K+KK+ P
Sbjct: 23 LTLEEVFYLCYSLKCLKINGDVDTGPLNEEELWRNFKSKKDALP 66
>gi|449017921|dbj|BAM81323.1| probable tRNA splicing endonuclease subunit Sen2 [Cyanidioschyzon
merolae strain 10D]
Length = 246
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 70/171 (40%), Gaps = 20/171 (11%)
Query: 67 TAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYS 126
T ++D + L E YL + L + G +N+ LW Y + + Y Y
Sbjct: 72 TDKEDVEHLHLAPFEAAYLAFDEQFLTVKGFENT----QSLWTYFVSLPKEHLRQYAVYR 127
Query: 127 HLRKKNWVVRSGSQYGVDFVAYRHHPS---LVHSEYAVLVLAEGEDGENGRLRVWSDIHC 183
R W SG +YG DFV YR S H+ YAVLV + E W +
Sbjct: 128 AYRHAGWAPHSGCKYGADFVLYRFRASEGRHSHAPYAVLVRSANERIHQR----WIAVQN 183
Query: 184 TVRLCGGVAKTLLILTINKNGQGTATPSC------LEQYAVEERTISRWSP 228
+RL VAK L+ + ++ + TA L+ + E + RW+P
Sbjct: 184 QLRLTKQVAKRLVYVEVSMS---TAMEHLQHRERWLQTVCLHEVLVDRWTP 231
>gi|328857399|gb|EGG06516.1| hypothetical protein MELLADRAFT_86553 [Melampsora larici-populina
98AG31]
Length = 388
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 32/150 (21%)
Query: 76 QLGMEEGFYLCHSLKCLKIVGEDNSTK------------NDDELWQYM---------KAK 114
QL E+ F+L + + CL+I E + T + +ELW+ +
Sbjct: 238 QLKPEDAFFLSYGIGCLQIEKEVSETDEVVSKPENKQWFSINELWETFCSNADRDSQRKP 297
Query: 115 KETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAY-RHHPSLVHSEYAVLVLAEGEDGEN- 172
F + Y Y H R WVVR G ++ VD+V Y P H+E+AV V+ ED +
Sbjct: 298 DNPFIVSYVTYHHFRSLGWVVRDGIKFCVDWVLYGSRGPVGGHAEFAVCVIPVYEDPNDQ 357
Query: 173 ---------GRLRVWSDIHCTVRLCGGVAK 193
+ + W + R+C GV K
Sbjct: 358 EELHQSDLSNQKKNWKWLSTVNRVCSGVKK 387
>gi|118431543|ref|NP_148074.2| tRNA-splicing endonuclease subunit alpha [Aeropyrum pernix K1]
gi|150421547|sp|Q9YBF1.2|ENDA_AERPE RecName: Full=tRNA-splicing endonuclease; AltName: Full=tRNA-intron
endonuclease
gi|343197207|pdb|3P1Z|B Chain B, Crystal Structure Of The Aperopyrum Pernix Rna Splicing
Endonuclease
gi|343197209|pdb|3P1Z|D Chain D, Crystal Structure Of The Aperopyrum Pernix Rna Splicing
Endonuclease
gi|343197211|pdb|3P1Z|F Chain F, Crystal Structure Of The Aperopyrum Pernix Rna Splicing
Endonuclease
gi|343197213|pdb|3P1Z|H Chain H, Crystal Structure Of The Aperopyrum Pernix Rna Splicing
Endonuclease
gi|343197215|pdb|3P1Z|J Chain J, Crystal Structure Of The Aperopyrum Pernix Rna Splicing
Endonuclease
gi|343197217|pdb|3P1Z|L Chain L, Crystal Structure Of The Aperopyrum Pernix Rna Splicing
Endonuclease
gi|116062868|dbj|BAA80647.2| tRNA-splicing endonuclease [Aeropyrum pernix K1]
Length = 186
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Query: 34 EAHAVLAGYSALLAVEAEQTELLNRACFGRHIVTAEKDKQW-----YQLGMEEGFYLCHS 88
+A VL G ++L + EQ L + + EK + +L + E YL
Sbjct: 9 KASGVLIG-DSVLVTDVEQARSLYSCGYYGQPLDVEKPRGADFEGPLRLSLIESLYLAEK 67
Query: 89 LKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAY 148
L++ D S+ ++L ++ F +LY Y LR++ +VVRSG ++G DF Y
Sbjct: 68 -GVLEVAKPDGSSVGVEDLRTAVRGNPR-FSMLYNIYRDLRERGFVVRSGLKFGSDFAVY 125
Query: 149 RHHPSLVHSEYAV 161
R P + H+ + V
Sbjct: 126 RLGPGIDHAPFIV 138
>gi|401881285|gb|EJT45587.1| tRNA-intron endonuclease [Trichosporon asahii var. asahii CBS 2479]
Length = 604
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 20/135 (14%)
Query: 119 PLL--YKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGEN---- 172
PLL Y Y+H R W VRSG ++ VD++ YR P HS +++LV+ + E+
Sbjct: 470 PLLVQYAVYAHFRALGWCVRSGIKFCVDWLLYRRGPVFSHSAFSILVVPVYMNNEDRDQS 529
Query: 173 --------GRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQ------GTATPSCLEQYAV 218
+ W I+ +R+ V KT+++ + + G + Q++V
Sbjct: 530 PHASTDWYAERQSWKWINTVMRVNSLVMKTVVVAYVTIPSRETFRTYGGDLSRIMGQFSV 589
Query: 219 EERTISRWSPEQCRE 233
E ++ R+SP + R+
Sbjct: 590 REVSLMRFSPARRRD 604
>gi|219362967|ref|NP_001136472.1| uncharacterized protein LOC100216584 [Zea mays]
gi|194695834|gb|ACF82001.1| unknown [Zea mays]
gi|195612968|gb|ACG28314.1| hypothetical protein [Zea mays]
gi|195616958|gb|ACG30309.1| hypothetical protein [Zea mays]
gi|224035063|gb|ACN36607.1| unknown [Zea mays]
Length = 118
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 175 LRVWSDIHCTVRLCGGVAKTLLILTINKNGQGTATPSCLEQYAVEERTISRWSPEQCRE 233
++VWS++ C + VAK +L+LTI+ + CLEQ V ERTI+RW P+ CRE
Sbjct: 1 MKVWSELLCALWDSSSVAK-MLLLTISTKSYELESLDCLEQMIVHERTITRWIPQPCRE 58
>gi|385805817|ref|YP_005842215.1| tRNA-splicing endonuclease subunit alpha [Fervidicoccus fontis
Kam940]
gi|383795680|gb|AFH42763.1| tRNA-splicing endonuclease subunit alpha [Fervidicoccus fontis
Kam940]
Length = 156
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 76 QLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVV 135
+L + E YL K L ++ + + DEL + ++F LY Y LR+K +VV
Sbjct: 24 ELSLVEALYLVEKGK-LSVLNSEGKEMSFDELLNEAYNRIKSFKSLYIIYRDLREKGYVV 82
Query: 136 RSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGED 169
RSG ++G D+ YRH P + H+ Y + V EG++
Sbjct: 83 RSGLKFGSDYSLYRHGPGIEHAPYLIHV-YEGDE 115
>gi|452982276|gb|EME82035.1| hypothetical protein MYCFIDRAFT_89840 [Pseudocercospora fijiensis
CIRAD86]
Length = 380
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 21/111 (18%)
Query: 76 QLGMEEGFYLCHSLKCLKIVGED-------NSTKNDDELWQYMKAK-------------- 114
QL +EE F+L ++L L++ + + +L QY A+
Sbjct: 219 QLTLEEAFFLTYALGVLQVRSSAPALSPTIETAYDTRQLMQYFAAQGSFPPKTIPYKPAP 278
Query: 115 KETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLA 165
+ F L Y Y H R WVVR G ++ D++ Y P H+E+AV++
Sbjct: 279 DDRFLLNYVVYHHFRSLGWVVRPGVKFSADYMLYLRGPVFSHAEFAVIIFP 329
>gi|448544416|ref|ZP_21625607.1| tRNA splicing endonuclease [Haloferax sp. ATCC BAA-646]
gi|448551381|ref|ZP_21629449.1| tRNA splicing endonuclease [Haloferax sp. ATCC BAA-645]
gi|448558040|ref|ZP_21632875.1| tRNA splicing endonuclease [Haloferax sp. ATCC BAA-644]
gi|445705490|gb|ELZ57387.1| tRNA splicing endonuclease [Haloferax sp. ATCC BAA-646]
gi|445710545|gb|ELZ62351.1| tRNA splicing endonuclease [Haloferax sp. ATCC BAA-645]
gi|445713616|gb|ELZ65392.1| tRNA splicing endonuclease [Haloferax sp. ATCC BAA-644]
Length = 339
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 64/154 (41%), Gaps = 17/154 (11%)
Query: 55 LLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAK 114
L R FG+ + D QL + E YL + L I D ++ D +
Sbjct: 189 LYQRGFFGQRLYGRNADSGPLQLSLLEAAYLARA-DALAIDESDVVSRGRD-------VE 240
Query: 115 KETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPS---LVHSEYAVLVLAEGEDGE 171
+ F Y+ LR+ V +SG ++G DF Y S L HSE V V+A G
Sbjct: 241 GDRFDRRLAVYAALREAATVPKSGFKFGSDFRVYTEFESVSDLSHSESLVRVVAPGH--- 297
Query: 172 NGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQ 205
V D+ VRL GGV K ++ + NG+
Sbjct: 298 ---TFVPRDLSLDVRLAGGVRKRMVFALTDDNGE 328
>gi|402592262|gb|EJW86191.1| hypothetical protein WUBG_02900 [Wuchereria bancrofti]
Length = 146
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 83 FYLCHSLKCLKIVGEDNSTKNDDELWQ-YMKAKKETFPLLYKAYSHLRKKNWVVRSGSQY 141
YL + L+I ++ D +W+ + F Y Y + R++ WVVRSG
Sbjct: 1 MYLSAEIGVLQISADNGQECMPDVVWKTFFGCYGIRFVRRYATYRYFRRQGWVVRSGLHC 60
Query: 142 GVDFVAYRHHPSLVHSEYAVLVLAEG 167
GVDF+ YR P HS AV ++++G
Sbjct: 61 GVDFMLYRDGPEYYHSSAAVRIVSKG 86
>gi|448087091|ref|XP_004196253.1| Piso0_005705 [Millerozyma farinosa CBS 7064]
gi|359377675|emb|CCE86058.1| Piso0_005705 [Millerozyma farinosa CBS 7064]
Length = 377
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 72/184 (39%), Gaps = 46/184 (25%)
Query: 72 KQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMK-----------AKKETFPL 120
+++ QL E F+L ++L + I D L + +K + F L
Sbjct: 204 REYLQLQATEVFFLRYALHAVDI---------DMTLLELLKECACVGSVASIGPRNNFVL 254
Query: 121 LYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSD 180
Y Y H R W VRSG ++G +F+ Y+ H+E+A+ ++ E W
Sbjct: 255 EYVVYHHYRSLGWCVRSGIKFGSNFLLYKRGLPFSHAEHAIYIVPEQVS--------WPS 306
Query: 181 IHCTVRLCGGVAKTLLIL---------------TINKNGQG---TATPSCLEQYAVEERT 222
I R+ GV K L+++ T+ + G+ + +QY V E
Sbjct: 307 ISALSRVVSGVKKNLVLVFVETPRQEVFDDLLHTLEREGKDHYKKNLSNIFQQYRVNELI 366
Query: 223 ISRW 226
RW
Sbjct: 367 YRRW 370
>gi|448560330|ref|ZP_21633778.1| tRNA splicing endonuclease [Haloferax prahovense DSM 18310]
gi|445721980|gb|ELZ73643.1| tRNA splicing endonuclease [Haloferax prahovense DSM 18310]
Length = 339
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 64/154 (41%), Gaps = 17/154 (11%)
Query: 55 LLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAK 114
L R FG+ + D QL + E YL + L I D ++ D +
Sbjct: 189 LYQRGFFGQRLYGRNADSGPLQLSLLEAAYLARA-DALAIDEADVVSRGRD-------VE 240
Query: 115 KETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPS---LVHSEYAVLVLAEGEDGE 171
+ F Y+ LR+ V +SG ++G DF Y S L HSE+ V V+A
Sbjct: 241 GDRFDRRLAVYAALREAKTVPKSGFKFGSDFRVYTEFESVSDLSHSEFLVRVVAPDH--- 297
Query: 172 NGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQ 205
V D+ VRL GGV K ++ + NG+
Sbjct: 298 ---TFVPRDLSLDVRLAGGVRKRMVFALTDDNGE 328
>gi|449298264|gb|EMC94281.1| hypothetical protein BAUCODRAFT_227890 [Baudoinia compniacensis
UAMH 10762]
Length = 574
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 22/137 (16%)
Query: 118 FPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVL----------AEG 167
F L Y Y H R WVVR G ++GVDF+ Y P H+E+AV+++ A+G
Sbjct: 437 FLLSYATYHHFRSLGWVVRPGIKFGVDFLLYNRGPVFSHAEFAVVIMPAYTHTYWATAKG 496
Query: 168 ED---GENGRLRVWSDIHCTVRLCGGVAKTLLILTIN---------KNGQGTATPSCLEQ 215
E + W +H R+ V KTL++ ++ G + + +
Sbjct: 497 RSLRRREGNGEKDWWWLHALNRVQSHVVKTLVLCYVDVPPPPPTTTGTGSVSDVTALFAR 556
Query: 216 YAVEERTISRWSPEQCR 232
Y + E + RWS + R
Sbjct: 557 YKIREFIVRRWSVNRMR 573
>gi|448573877|ref|ZP_21641288.1| tRNA splicing endonuclease [Haloferax lucentense DSM 14919]
gi|448597999|ref|ZP_21654881.1| tRNA splicing endonuclease [Haloferax alexandrinus JCM 10717]
gi|445718386|gb|ELZ70087.1| tRNA splicing endonuclease [Haloferax lucentense DSM 14919]
gi|445738701|gb|ELZ90214.1| tRNA splicing endonuclease [Haloferax alexandrinus JCM 10717]
Length = 339
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 64/154 (41%), Gaps = 17/154 (11%)
Query: 55 LLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAK 114
L R FG+ + D QL + E YL + L I D ++ D +
Sbjct: 189 LYQRGFFGQRLYGRNADSGPLQLSLLEAAYLARA-DALAIDEADVVSRGRD-------VE 240
Query: 115 KETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPS---LVHSEYAVLVLAEGEDGE 171
+ F Y+ LR+ V +SG ++G DF Y S L HSE+ V V+A
Sbjct: 241 GDRFDRRLAVYAALREAKTVPKSGFKFGSDFRVYTEFESVDDLSHSEFLVRVVAPDH--- 297
Query: 172 NGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQ 205
V D+ VRL GGV K ++ + NG+
Sbjct: 298 ---TFVPRDLSLDVRLAGGVRKRMVFALTDDNGE 328
>gi|347524144|ref|YP_004781714.1| tRNA intron endonuclease [Pyrolobus fumarii 1A]
gi|343461026|gb|AEM39462.1| tRNA intron endonuclease [Pyrolobus fumarii 1A]
Length = 193
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 76 QLGMEEGFYLCHSLKCLKIVGEDNSTK--NDDELWQYMKAKKETFPLLYKAYSHLRKKNW 133
+L + E YL + L +V ED+ + DEL F LLY+ YS LR +
Sbjct: 59 ELDLIEAVYLVR--RGLLVV-EDSEGRVLTPDELESIAARFVPRFHLLYRVYSELRDAGY 115
Query: 134 VVRSGSQYGVDFVAYRHHPSLVHSEYAVLVL 164
VVRSG ++G DF Y H P + H+ + V V+
Sbjct: 116 VVRSGLKFGTDFAVYVHGPGIDHAPFLVSVV 146
>gi|2160792|gb|AAC45446.1| tRNA intron endonuclease [Haloferax volcanii]
Length = 339
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 64/154 (41%), Gaps = 17/154 (11%)
Query: 55 LLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAK 114
L R FG+ + D QL + E YL + L I D ++ D +
Sbjct: 189 LYQRGFFGQRLYGRNADSGPLQLSLLEAAYLARA-DALAIDEADVVSRGRD-------VE 240
Query: 115 KETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPS---LVHSEYAVLVLAEGEDGE 171
+ F Y+ LR+ V +SG ++G DF Y S L HSE+ V V+A
Sbjct: 241 GDRFDRRLAVYAALREAKTVPKSGFKFGSDFRVYTEFESVDDLSHSEFLVRVVAPDH--- 297
Query: 172 NGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQ 205
V D+ VRL GGV K ++ + NG+
Sbjct: 298 ---TFVPRDLSLDVRLAGGVRKRMVFALTDDNGE 328
>gi|292657060|ref|YP_003536957.1| tRNA-splicing endonuclease [Haloferax volcanii DS2]
gi|448293659|ref|ZP_21483763.1| tRNA splicing endonuclease [Haloferax volcanii DS2]
gi|347595652|sp|O07118.2|ENDA_HALVD RecName: Full=tRNA-splicing endonuclease; AltName: Full=tRNA-intron
endonuclease
gi|291372038|gb|ADE04265.1| tRNA-splicing endonuclease [Haloferax volcanii DS2]
gi|445569990|gb|ELY24557.1| tRNA splicing endonuclease [Haloferax volcanii DS2]
Length = 339
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 64/154 (41%), Gaps = 17/154 (11%)
Query: 55 LLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAK 114
L R FG+ + D QL + E YL + L I D ++ D +
Sbjct: 189 LYQRGFFGQRLYGRNADSGPLQLSLLEAAYLARA-DALAIDEADVVSRGRD-------VE 240
Query: 115 KETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPS---LVHSEYAVLVLAEGEDGE 171
+ F Y+ LR+ V +SG ++G DF Y S L HSE+ V V+A
Sbjct: 241 GDRFDRRLAVYAALREAKTVPKSGFKFGSDFRVYTEFESVDDLSHSEFLVRVVAPDH--- 297
Query: 172 NGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQ 205
V D+ VRL GGV K ++ + NG+
Sbjct: 298 ---TFVPRDLSLDVRLAGGVRKRMVFALTDDNGE 328
>gi|433422442|ref|ZP_20405999.1| tRNA splicing endonuclease [Haloferax sp. BAB2207]
gi|432198618|gb|ELK54881.1| tRNA splicing endonuclease [Haloferax sp. BAB2207]
Length = 339
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 64/154 (41%), Gaps = 17/154 (11%)
Query: 55 LLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAK 114
L R FG+ + D QL + E YL + L I D ++ D +
Sbjct: 189 LYQRGFFGQRLYGRNADSGPLQLSLLEAAYLARA-DALAIDEADVVSRGRD-------VE 240
Query: 115 KETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPS---LVHSEYAVLVLAEGEDGE 171
+ F Y+ LR+ V +SG ++G DF Y S L HSE+ V V+A
Sbjct: 241 GDRFDRRLAVYAALREAKTVPKSGFKFGSDFRVYTEFESVDDLSHSEFLVRVVAPDH--- 297
Query: 172 NGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQ 205
V D+ VRL GGV K ++ + NG+
Sbjct: 298 ---TFVPRDLSLDVRLAGGVRKRMVFALTDDNGE 328
>gi|414585091|tpg|DAA35662.1| TPA: hypothetical protein ZEAMMB73_748597 [Zea mays]
Length = 434
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 159 YAVLVLAEGE--DGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGTATPSCLEQY 216
+ +V EG+ D ++VWS++ C + VAKTLL+LTI+ CLEQ
Sbjct: 363 FVEVVALEGKAFDTRCALMKVWSELLCALWDSSSVAKTLLLLTISTKSYELGYLDCLEQM 422
Query: 217 AVEERTISRWSP 228
V ERTI+RW P
Sbjct: 423 IVHERTITRWIP 434
>gi|413918107|gb|AFW58039.1| hypothetical protein ZEAMMB73_777360 [Zea mays]
Length = 213
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 159 YAVLVLAEGE--DGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGTATPSCLEQY 216
+ +V EG+ D R++ WS++ C + VAK +L+LTI+ + CLEQ
Sbjct: 111 FVEVVAPEGKAFDTRCTRMKFWSELLCALWDSSSVAK-MLLLTISTKSYELGSLDCLEQM 169
Query: 217 AVEERTISRWSPEQCRE 233
+ E TI+RW P+ CRE
Sbjct: 170 IIHEMTITRWIPQSCRE 186
>gi|124026948|ref|YP_001012268.1| tRNA-splicing endonuclease subunit alpha [Hyperthermus butylicus
DSM 5456]
gi|160380654|sp|A2BIW2.1|ENDA_HYPBU RecName: Full=tRNA-splicing endonuclease; AltName: Full=tRNA-intron
endonuclease
gi|123977642|gb|ABM79923.1| General archaeal splicing enzyme [Hyperthermus butylicus DSM 5456]
Length = 181
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%)
Query: 91 CLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRH 150
L++ E+ + +E+ + + F LLYK Y LR + +VVRSG +YG DF Y
Sbjct: 61 MLEVYDEEGHRVSVEEVRRRAERFIPKFELLYKVYRDLRDRGYVVRSGLKYGSDFAVYER 120
Query: 151 HPSLVHSEYAVLVLAEGED 169
P L H+ Y V V+ E+
Sbjct: 121 GPGLEHAPYLVHVMRVDEE 139
>gi|389860489|ref|YP_006362728.1| trNA-splicing endonuclease subunit alpha [Thermogladius
cellulolyticus 1633]
gi|388525392|gb|AFK50590.1| tRNA-splicing endonuclease subunit alpha [Thermogladius
cellulolyticus 1633]
Length = 185
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 68 AEKDKQWYQLGMEEGFYLCHS--LKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAY 125
+ D+ +L + E YL L+ G+ + +EL+ + F LY Y
Sbjct: 41 SRSDQAPLELSLIEALYLLEKNLLRVYADRGDGPTPLTPEELYSIGLERVNRFRELYVVY 100
Query: 126 SHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTV 185
LR++ +VVR G ++G D++ YR P + H+ Y V V ++ E + +I
Sbjct: 101 KDLRERGFVVRRGLKFGCDYLVYRRGPGIDHAPYGVQVYSKDESTDP------IEIVRMG 154
Query: 186 RLCGGVAKTLLILTINK 202
RL V K L++ +++
Sbjct: 155 RLLHSVRKRLIVAIVDE 171
>gi|448605352|ref|ZP_21658027.1| tRNA splicing endonuclease [Haloferax sulfurifontis ATCC BAA-897]
gi|445742876|gb|ELZ94369.1| tRNA splicing endonuclease [Haloferax sulfurifontis ATCC BAA-897]
Length = 339
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 63/154 (40%), Gaps = 17/154 (11%)
Query: 55 LLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAK 114
L R FG+ + D QL + E YL + L I D ++ D +
Sbjct: 189 LYQRGFFGQRLYGRNADSGPLQLSLLEAAYLARA-DALAIDEADVVSRGRD-------VE 240
Query: 115 KETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPS---LVHSEYAVLVLAEGEDGE 171
+ F Y+ LR V +SG ++G DF Y S L HSE+ V V+A
Sbjct: 241 GDRFDRRLAVYAALRGAKTVPKSGFKFGSDFRVYTEFESVSDLSHSEFLVRVVAPDH--- 297
Query: 172 NGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQ 205
V D+ VRL GGV K ++ + NG+
Sbjct: 298 ---TFVPRDLSLDVRLAGGVRKRMVFALTDDNGE 328
>gi|401624688|gb|EJS42739.1| sen2p [Saccharomyces arboricola H-6]
Length = 377
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 51/126 (40%), Gaps = 15/126 (11%)
Query: 117 TFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLR 176
+F Y Y H R W VRSG ++G D++ Y+ P H+E+ V+ G D + +
Sbjct: 258 SFVRYYVIYHHYRSHGWCVRSGIKFGCDYLLYKRGPPFQHAEFCVM----GLDHDVSKAY 313
Query: 177 VWSDIHCTVRLCGGVAKTLLILTINK---------NGQGTATPSCLEQYAVEERTISRWS 227
W R+ GG KT ++ + + + Y V E RW
Sbjct: 314 TWYS--SIARVVGGAKKTFVLCYVERLISEEDAVALWKANNFTKLFNSYQVAEVIYKRWV 371
Query: 228 PEQCRE 233
P + R+
Sbjct: 372 PGRNRD 377
>gi|119872405|ref|YP_930412.1| tRNA-splicing endonuclease subunit alpha [Pyrobaculum islandicum
DSM 4184]
gi|160380657|sp|A1RSY7.1|ENDA_PYRIL RecName: Full=tRNA-splicing endonuclease; AltName: Full=tRNA-intron
endonuclease
gi|119673813|gb|ABL88069.1| tRNA intron endonuclease [Pyrobaculum islandicum DSM 4184]
Length = 183
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 7/127 (5%)
Query: 77 LGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVR 136
L + E YL K LK+V ++ + ++L + + K + F +YK Y + R +VV+
Sbjct: 50 LALYEALYLAERGK-LKVVSKNGTEVLPEKLIELGREKIKNFDDIYKIYKYFRDLGYVVK 108
Query: 137 SGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLL 196
SG ++G F Y P + H+ V+ L E R +DI RL V KT
Sbjct: 109 SGLKFGALFSVYERGPGIDHAPMVVVFL------EPDRGISATDITRGGRLSHSVKKTFT 162
Query: 197 ILTINKN 203
+ T++K
Sbjct: 163 LATVSKQ 169
>gi|333910597|ref|YP_004484330.1| tRNA-splicing endonuclease [Methanotorris igneus Kol 5]
gi|333751186|gb|AEF96265.1| tRNA-splicing endonuclease [Methanotorris igneus Kol 5]
Length = 175
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 9/140 (6%)
Query: 68 AEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSH 127
EK+ + L + E YL SL L + + + +EL++Y + +E+ + Y Y
Sbjct: 32 GEKNDDFLSLSLIEALYLT-SLGWLVVKDSNGRLLSFEELYEYARNIEESLCIKYLVYKD 90
Query: 128 LRKKNWVVRSGSQYGVDFVAYRHHPSLV--HSEYAVLVLAEGEDGENGRLRVWSDIHCTV 185
LR + + V++G +YG DF Y + HS Y V V +E + S++ V
Sbjct: 91 LRNRGYTVKTGLKYGTDFRLYERGADIDKEHSVYLVKVFSEEKPCN------ISELTGFV 144
Query: 186 RLCGGVAKTLLILTINKNGQ 205
R+ V K LLI ++ +G
Sbjct: 145 RVAHSVRKKLLIAIVDADGD 164
>gi|448582993|ref|ZP_21646472.1| tRNA splicing endonuclease [Haloferax gibbonsii ATCC 33959]
gi|445730447|gb|ELZ82036.1| tRNA splicing endonuclease [Haloferax gibbonsii ATCC 33959]
Length = 339
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 62/154 (40%), Gaps = 17/154 (11%)
Query: 55 LLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAK 114
L R FG+ + D QL + E YL + +T D + + +
Sbjct: 189 LYQRGFFGQRLYGRNADSGPLQLSLLEAAYLARADAL--------ATDEADVVSRGRDVE 240
Query: 115 KETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPS---LVHSEYAVLVLAEGEDGE 171
+ F Y+ LR V +SG ++G DF Y S L HSE+ V V+A
Sbjct: 241 GDRFDRRLAVYAALRGAKTVPKSGFKFGSDFRVYTEFESVSDLSHSEFLVRVVAPDH--- 297
Query: 172 NGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQ 205
V D+ VRL GGV K ++ + NG+
Sbjct: 298 ---TFVPRDLSLDVRLAGGVRKRMVFALTDDNGE 328
>gi|126460235|ref|YP_001056513.1| tRNA-splicing endonuclease subunit alpha [Pyrobaculum calidifontis
JCM 11548]
gi|126249956|gb|ABO09047.1| tRNA intron endonuclease [Pyrobaculum calidifontis JCM 11548]
Length = 184
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 73/173 (42%), Gaps = 14/173 (8%)
Query: 37 AVLAGYSALLAVEAEQTELLNRACFGRHI-------VTAEKDKQWYQLGMEEGFYLCHSL 89
VL G + ++ EL R +GR + +K L + E YL
Sbjct: 4 GVLRGLAVVVEDVESGRELYRRGFYGRFLGYDKVKREEVDKVDAPLILALYEALYLAEK- 62
Query: 90 KCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYR 149
L +V E+ +L + +A+ + F +YK Y + R +VV+SG ++G F Y
Sbjct: 63 GVLTVVDENGVEIPPQQLVELGRARIKNFDDIYKIYKYFRDLGYVVKSGLKFGALFSVYE 122
Query: 150 HHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTINK 202
P + H+ V+V E + G + +DI RL V KT + T+ K
Sbjct: 123 KGPGIDHAP-MVVVFLEPDKGISA-----TDITRGGRLGHSVKKTFTLATVLK 169
>gi|254581452|ref|XP_002496711.1| ZYRO0D06424p [Zygosaccharomyces rouxii]
gi|238939603|emb|CAR27778.1| ZYRO0D06424p [Zygosaccharomyces rouxii]
Length = 357
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 66/162 (40%), Gaps = 17/162 (10%)
Query: 81 EGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQ 140
E +L +L L I +D + + +Y + F Y Y H R W RSG +
Sbjct: 204 EAMFLTFALPVLDITAKDLTRRLVGIPEKYEDIHQ--FISQYVVYHHYRSHGWCARSGVK 261
Query: 141 YGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLIL-- 198
+G D++ Y+ P L H+E+ V +L + ++ ++ R+ G KT ++
Sbjct: 262 FGCDYLLYQRGPPLEHAEFCVRILNSND------IKDYNWYSSLARVVAGANKTYVLCYV 315
Query: 199 -------TINKNGQGTATPSCLEQYAVEERTISRWSPEQCRE 233
TI + S Y V E T RW P + RE
Sbjct: 316 ESLRSPETILRWWHQGNYKSIFSSYKVGEITYKRWIPGKNRE 357
>gi|312207782|pdb|3AJV|B Chain B, Splicing Endonuclease From Aeropyrum Pernix
gi|312207784|pdb|3AJV|D Chain D, Splicing Endonuclease From Aeropyrum Pernix
Length = 186
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 8/133 (6%)
Query: 34 EAHAVLAGYSALLAVEAEQTELLNRACFGRHIVTAEKDKQW-----YQLGMEEGFYLCHS 88
+A VL G S L+ + EQ L + + EK + +L + E YL
Sbjct: 9 KASGVLIGDSVLVT-DVEQARSLYSCGYYGQPLDVEKPRGADFEGPLRLSLIESLYLAEK 67
Query: 89 LKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAY 148
L++ D S+ ++L ++ F +LY Y LR++ +VVRSG ++G DF Y
Sbjct: 68 -GVLEVAKPDGSSVGVEDLRTAVRGNPR-FSMLYNIYRDLRERGFVVRSGLKFGSDFAVY 125
Query: 149 RHHPSLVHSEYAV 161
R P + + + V
Sbjct: 126 RLGPGIDAAPFIV 138
>gi|374636666|ref|ZP_09708223.1| tRNA intron endonuclease [Methanotorris formicicus Mc-S-70]
gi|373558221|gb|EHP84575.1| tRNA intron endonuclease [Methanotorris formicicus Mc-S-70]
Length = 175
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 9/140 (6%)
Query: 68 AEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSH 127
EK+ + L + E YL SL L + + + ++L++Y + +E+ + Y Y
Sbjct: 32 GEKNDNFLSLSLVEALYLT-SLGWLVVKDSNGKLLSFEKLYEYARNIEESLCIKYLVYRD 90
Query: 128 LRKKNWVVRSGSQYGVDFVAYRHHPSL--VHSEYAVLVLAEGEDGENGRLRVWSDIHCTV 185
LR + + V++G +YG DF Y + HS Y V V +E + S++ V
Sbjct: 91 LRNRGYTVKTGLKYGTDFRLYERGADIDKEHSIYLVKVFSEEKPCN------ISELTGFV 144
Query: 186 RLCGGVAKTLLILTINKNGQ 205
R+ V K LLI ++ +G
Sbjct: 145 RVAHSVRKKLLIAIVDADGD 164
>gi|256811335|ref|YP_003128704.1| tRNA-splicing endonuclease subunit alpha [Methanocaldococcus
fervens AG86]
gi|256794535|gb|ACV25204.1| tRNA intron endonuclease [Methanocaldococcus fervens AG86]
Length = 173
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 10/135 (7%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
+ L + E YL + L L V ++N + +EL++Y K +E L Y Y LR +
Sbjct: 36 NFLSLSLVEALYLTN-LGWLA-VKDNNKILSFEELYEYAKNIEERLCLKYLVYKDLRSRG 93
Query: 133 WVVRSGSQYGVDFVAYRHHPSLV--HSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGG 190
++V++G +YG DF Y ++ HS Y V V E + +++ VR+
Sbjct: 94 YIVKTGLKYGADFRLYERGANIDKEHSVYLVKVFTEDSS------FLLNELTGFVRVAHS 147
Query: 191 VAKTLLILTINKNGQ 205
V K LLI ++ +G
Sbjct: 148 VRKKLLIAIVDADGD 162
>gi|323353970|gb|EGA85823.1| Sen2p [Saccharomyces cerevisiae VL3]
Length = 157
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 66/164 (40%), Gaps = 21/164 (12%)
Query: 81 EGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKE--TFPLLYKAYSHLRKKNWVVRSG 138
E +L +L L I + K L+Q+ K+ +F Y Y H R W VRSG
Sbjct: 4 EAMFLTFALPVLDISPACLAGK----LFQFDAKYKDIHSFVRSYVIYHHYRSHGWCVRSG 59
Query: 139 SQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLIL 198
++G D++ Y+ P H+E+ V+ G D + + W R+ GG KT ++
Sbjct: 60 IKFGCDYLLYKRGPPFQHAEFCVM----GLDHDVSKDYTWYS--SIARVVGGAKKTFVLC 113
Query: 199 TINK---------NGQGTATPSCLEQYAVEERTISRWSPEQCRE 233
+ + + + V E RW P + R+
Sbjct: 114 YVERLISEQEAIALWKSNNFTKLFNSFQVGEVLYKRWVPGRNRD 157
>gi|149049698|gb|EDM02152.1| tRNA splicing endonuclease 2 homolog (S. cerevisiae) [Rattus
norvegicus]
Length = 338
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 80 EEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGS 139
+E F+L ++L CL I E +LWQ A + TF Y AY + R K WV + G
Sbjct: 274 DEAFFLAYALGCLSIYYEKEPL-TIVKLWQAFTAVQPTFRTTYMAYHYFRSKGWVPKVGL 332
Query: 140 QYGVDF 145
+YG D
Sbjct: 333 KYGTDL 338
>gi|261402853|ref|YP_003247077.1| tRNA-splicing endonuclease subunit alpha [Methanocaldococcus
vulcanius M7]
gi|261369846|gb|ACX72595.1| tRNA intron endonuclease [Methanocaldococcus vulcanius M7]
Length = 174
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 9/135 (6%)
Query: 73 QWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKN 132
+ L + E YL + L +++ ++ + +EL++Y + +E L Y Y LR +
Sbjct: 36 NFLSLSLVEALYLMN-LGWIEVKDKNKKIISFEELYEYARTVEEKLCLKYLVYKDLRTRG 94
Query: 133 WVVRSGSQYGVDFVAYRHHPSL--VHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGG 190
++V++G +YG DF Y ++ HS Y V V +E + S++ VR+
Sbjct: 95 YIVKTGLKYGADFRLYERGANIEKEHSVYLVKVFSEDCS------LLLSELTGFVRVAHS 148
Query: 191 VAKTLLILTINKNGQ 205
V K LLI ++ +G
Sbjct: 149 VRKKLLIAIVDADGD 163
>gi|167387965|ref|XP_001738384.1| tRNA-splicing endonuclease [Entamoeba dispar SAW760]
gi|165898480|gb|EDR25328.1| tRNA-splicing endonuclease, putative [Entamoeba dispar SAW760]
Length = 163
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 122 YKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDI 181
Y Y L+KK + ++ G +YG DFV Y+ HP HS Y VL++ + N L
Sbjct: 73 YHLYCELKKKGFFIKDGFKYGCDFVVYKKHPQCCHSYYGVLLMNIHQSLINNELIGLC-- 130
Query: 182 HCTVRLCGGVAKTLLILTIN 201
RL V K LL+ N
Sbjct: 131 ----RLLHNVKKHLLLCNYN 146
>gi|167526034|ref|XP_001747351.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774186|gb|EDQ87818.1| predicted protein [Monosiga brevicollis MX1]
Length = 1322
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 31/145 (21%), Positives = 64/145 (44%), Gaps = 15/145 (10%)
Query: 80 EEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGS 139
E+ F+L H+L CL + + +D +L+ + +L + + + WV ++G
Sbjct: 491 EQAFFLAHALGCLNVKSQTGQALSDGQLF----VGYDNSRVLASMHPN---RGWVPKTGL 543
Query: 140 QYGVDFVAYRHHPSLVHSEYAVLVLAEGEDG----ENGRLRVWSDIHCTVRLCGGVAKTL 195
++ D++ YR P+ HS Y+++V D W + R+ G K
Sbjct: 544 KFAADWLIYRQGPTFYHSSYSIVVRTAWADTFDPWHAEPTMSWHYLSAVSRVSGQAGKEA 603
Query: 196 LILTINK----NGQGTATPSCLEQY 216
++ + + +G PSCL+++
Sbjct: 604 MVAYVVRPRAVDGAALRDPSCLDKF 628
>gi|323332543|gb|EGA73951.1| Sen2p [Saccharomyces cerevisiae AWRI796]
Length = 218
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 66/164 (40%), Gaps = 21/164 (12%)
Query: 81 EGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKE--TFPLLYKAYSHLRKKNWVVRSG 138
E +L +L L I + K L+Q+ K+ +F Y Y H R W VRSG
Sbjct: 65 EAMFLTFALPVLDISPACLAGK----LFQFDAKYKDIHSFVRSYVIYHHYRSHGWCVRSG 120
Query: 139 SQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLIL 198
++G D++ Y+ P H+E+ V+ G D + + W R+ GG KT ++
Sbjct: 121 IKFGCDYLLYKRGPPFQHAEFCVM----GLDHDVSKDYTWYS--SIARVVGGAKKTFVLC 174
Query: 199 TINK---------NGQGTATPSCLEQYAVEERTISRWSPEQCRE 233
+ + + + V E RW P + R+
Sbjct: 175 YVERLISEQEAIALWKSNNFTKLFNSFQVGEVLYKRWVPGRNRD 218
>gi|150402310|ref|YP_001329604.1| tRNA-splicing endonuclease subunit alpha [Methanococcus maripaludis
C7]
gi|150033340|gb|ABR65453.1| tRNA intron endonuclease [Methanococcus maripaludis C7]
Length = 176
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 63/138 (45%), Gaps = 8/138 (5%)
Query: 68 AEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSH 127
E + + L EG YL S + + + N + +EL+ + + Y AY
Sbjct: 34 GELHENFLSLSFVEGLYLV-SKNWISLRDKTNKLLSFEELFDVAQNIDRKLCIRYLAYKD 92
Query: 128 LRKKNWVVRSGSQYGVDFVAY-RHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVR 186
LR + + VR+G +YG DF Y R + +HS Y V V +E E S+I VR
Sbjct: 93 LRNRGYTVRTGLKYGSDFRLYERSNIDEIHSRYLVKVFSEEIPCE------ISEITGFVR 146
Query: 187 LCGGVAKTLLILTINKNG 204
+ V K L+I ++ +G
Sbjct: 147 VAHSVRKELIIAIVDADG 164
>gi|297527305|ref|YP_003669329.1| tRNA intron endonuclease [Staphylothermus hellenicus DSM 12710]
gi|297256221|gb|ADI32430.1| tRNA intron endonuclease [Staphylothermus hellenicus DSM 12710]
Length = 182
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 8/126 (6%)
Query: 76 QLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVV 135
+L + E YL K L I N ++EL+ E F LY Y LR++ ++V
Sbjct: 51 ELSIIEALYLFEK-KTLDIY-MGNKKVEENELYTIGNKYIERFKELYIVYKDLRERGFIV 108
Query: 136 RSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTL 195
R G ++G D++ YR P + H+ + V V E + DI RL V K L
Sbjct: 109 RRGLKFGCDYLIYRFGPGIDHAPFGVEVFLSSEKYDP------IDIVRIGRLLHSVRKKL 162
Query: 196 LILTIN 201
+I ++
Sbjct: 163 IIAIVS 168
>gi|159905917|ref|YP_001549579.1| tRNA-splicing endonuclease subunit alpha [Methanococcus maripaludis
C6]
gi|159887410|gb|ABX02347.1| tRNA intron endonuclease [Methanococcus maripaludis C6]
Length = 176
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 63/138 (45%), Gaps = 8/138 (5%)
Query: 68 AEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSH 127
E + + L EG YL S + + ++N + EL+ + + Y AY
Sbjct: 34 GELHENFLSLSFVEGLYLV-SKNWISLRDKNNKLLSFGELFDVAQNIDRKLCIRYLAYKD 92
Query: 128 LRKKNWVVRSGSQYGVDFVAY-RHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVR 186
LR + + VR+G +YG DF Y R + +HS Y V V +E E S+I VR
Sbjct: 93 LRNRGYTVRTGLKYGSDFRLYERSNIDEIHSRYLVKVFSEEIPCE------ISEITGFVR 146
Query: 187 LCGGVAKTLLILTINKNG 204
+ V K L+I ++ +G
Sbjct: 147 VAHSVRKELIIAIVDADG 164
>gi|67480495|ref|XP_655597.1| tRNA intron endonuclease [Entamoeba histolytica HM-1:IMSS]
gi|67482393|ref|XP_656546.1| tRNA intron endonuclease [Entamoeba histolytica HM-1:IMSS]
gi|56472749|gb|EAL50211.1| tRNA intron endonuclease, putative [Entamoeba histolytica
HM-1:IMSS]
gi|56473751|gb|EAL51160.1| tRNA intron endonuclease, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449706131|gb|EMD46042.1| tRNA intron endonuclease, putative [Entamoeba histolytica KU27]
Length = 163
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 122 YKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVL 164
Y+ Y L+KK ++ G +YG DFV Y++HP HS Y V+++
Sbjct: 73 YQLYCELKKKGLFIKDGFKYGCDFVVYKNHPQYCHSSYGVILM 115
>gi|407041802|gb|EKE40962.1| tRNA intron endonuclease, putative, partial [Entamoeba nuttalli
P19]
Length = 163
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 122 YKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRL----RV 177
Y+ Y L+KK ++ G +YG DFV Y++HP HS Y V+++ + N L R+
Sbjct: 73 YQLYCELKKKGLFIKDGFKYGCDFVVYKNHPQYCHSSYGVILMNIHQSLINNELIGLCRL 132
Query: 178 WSDIHCTVRLCG 189
++ + LC
Sbjct: 133 LHNVKKHLLLCN 144
>gi|119719531|ref|YP_920026.1| tRNA-splicing endonuclease subunit alpha [Thermofilum pendens Hrk
5]
gi|119524651|gb|ABL78023.1| tRNA intron endonuclease [Thermofilum pendens Hrk 5]
Length = 171
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 76 QLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVV 135
+L + + YL CL + ED S + EL++ E F Y Y LR + +VV
Sbjct: 38 ELSLFDAMYLLEQ-GCLDLKREDGSPVSPSELFELASRIYENFYDAYAVYKDLRGRGYVV 96
Query: 136 RSGSQYGVDFVAYRHHPSLVHSEYAVLVL 164
+SG ++G F Y+ P + HS + V VL
Sbjct: 97 KSGMKFGSTFAVYQFGPGIDHSIFLVDVL 125
>gi|66357090|ref|XP_625723.1| possible tRNA-INTRON ENDONUCLEASE [Cryptosporidium parvum Iowa II]
gi|46226739|gb|EAK87718.1| possible tRNA-INTRON ENDONUCLEASE [Cryptosporidium parvum Iowa II]
Length = 158
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 100 STKNDDELWQYMKAKKETFPLL-YKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSE 158
+ +N ++ + +E LL Y Y + ++KN++V+ G ++GVD++ Y PSLVH +
Sbjct: 4 TYENISNIYNKFQFNQENLILLKYIIYKYFKEKNYIVKDGMKFGVDYILYHKSPSLVHGK 63
Query: 159 YAVLV 163
+ +L+
Sbjct: 64 HCILI 68
>gi|171185887|ref|YP_001794806.1| tRNA-splicing endonuclease subunit alpha [Pyrobaculum neutrophilum
V24Sta]
gi|254783125|sp|B1Y9D1.1|ENDA_THENV RecName: Full=tRNA-splicing endonuclease; AltName: Full=tRNA-intron
endonuclease
gi|170935099|gb|ACB40360.1| tRNA intron endonuclease [Pyrobaculum neutrophilum V24Sta]
Length = 183
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 7/127 (5%)
Query: 77 LGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVR 136
L + E YL + +K+V ED + ++L + + F +YK Y + R +VV+
Sbjct: 50 LALYEALYLAERGR-IKVVAEDGAEIPPEKLAELGRGMIRNFDDVYKIYKYFRDLGYVVK 108
Query: 137 SGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLL 196
SG ++G F Y P + H+ V+ L E R +DI RL V KT
Sbjct: 109 SGLKFGALFSVYEKGPGIDHAPMVVVFL------EPDRGISATDITRGGRLGHSVKKTFT 162
Query: 197 ILTINKN 203
+ T+ +
Sbjct: 163 LATVLRQ 169
>gi|207343087|gb|EDZ70655.1| YLR105Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 295
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 12/124 (9%)
Query: 81 EGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKE--TFPLLYKAYSHLRKKNWVVRSG 138
E +L +L L I + K L+Q+ K+ +F Y Y H R W VRSG
Sbjct: 142 EAMFLTFALPVLDISPACLAGK----LFQFDAKYKDIHSFVRSYVIYHHYRSHGWCVRSG 197
Query: 139 SQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLIL 198
++G D++ Y+ P H+E+ V+ G D + + W R+ GG KT ++
Sbjct: 198 IKFGCDYLLYKRGPPFQHAEFCVM----GLDHDVSKDYTW--YSSIARVVGGAKKTFVLC 251
Query: 199 TINK 202
+ +
Sbjct: 252 YVER 255
>gi|323336639|gb|EGA77905.1| Sen2p [Saccharomyces cerevisiae Vin13]
Length = 300
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 12/124 (9%)
Query: 81 EGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKE--TFPLLYKAYSHLRKKNWVVRSG 138
E +L +L L I + K L+Q+ K+ +F Y Y H R W VRSG
Sbjct: 147 EAMFLTFALPVLDISPACLAGK----LFQFDAKYKDIHSFVRSYVIYHHYRSHGWCVRSG 202
Query: 139 SQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLIL 198
++G D++ Y+ P H+E+ V+ G D + + W R+ GG KT ++
Sbjct: 203 IKFGCDYLLYKRGPPFQHAEFCVM----GLDHDVSKDYTW--YSSIARVVGGAKKTFVLC 256
Query: 199 TINK 202
+ +
Sbjct: 257 YVER 260
>gi|410076282|ref|XP_003955723.1| hypothetical protein KAFR_0B02910 [Kazachstania africana CBS 2517]
gi|372462306|emb|CCF56588.1| hypothetical protein KAFR_0B02910 [Kazachstania africana CBS 2517]
Length = 351
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 122 YKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDI 181
Y AY H R W VRSG ++G D++ Y+ P H+E V+V+ D + W
Sbjct: 237 YVAYHHYRSHGWCVRSGIKFGTDYLLYKRGPPFQHAEICVMVI----DSQASNDYTW--- 289
Query: 182 HCTV-RLCGGVAKTLLI 197
+ T+ R+ G KTLL+
Sbjct: 290 YSTLSRVSSGAKKTLLL 306
>gi|312075087|ref|XP_003140261.1| tRNA-splicing endonuclease subunit SEN2 [Loa loa]
Length = 146
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 83 FYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKET-FPLLYKAYSHLRKKNWVVRSGSQY 141
YL + L+I + D +W+ + F Y Y + R + WVVRSG
Sbjct: 1 MYLSAEVGVLQIFANNGQECVPDVVWKIFYDRYGIRFVRRYATYRYFRLQGWVVRSGLHC 60
Query: 142 GVDFVAYRHHPSLVHSEYAVLVLAEG 167
GVDF+ YR P HS AV +++ G
Sbjct: 61 GVDFMLYRDGPEYYHSSAAVRIVSIG 86
>gi|6323134|ref|NP_013206.1| Sen2p [Saccharomyces cerevisiae S288c]
gi|134427|sp|P16658.1|SEN2_YEAST RecName: Full=tRNA-splicing endonuclease subunit SEN2; AltName:
Full=Splicing endonuclease protein 2; AltName:
Full=tRNA-intron endonuclease SEN2
gi|172576|gb|AAB65811.1| tRNA splicing endonuclease beta-subunit [Saccharomyces cerevisiae]
gi|1256853|gb|AAB67547.1| Sen2p: tRNA-splicing endonuclease beta-subunit [Saccharomyces
cerevisiae]
gi|1360492|emb|CAA97670.1| SEN2 [Saccharomyces cerevisiae]
gi|151941272|gb|EDN59650.1| tRNA splicing endonuclease subunit [Saccharomyces cerevisiae
YJM789]
gi|190406141|gb|EDV09408.1| tRNA splicing endonuclease subunit [Saccharomyces cerevisiae
RM11-1a]
gi|256271857|gb|EEU06887.1| Sen2p [Saccharomyces cerevisiae JAY291]
gi|259148093|emb|CAY81342.1| Sen2p [Saccharomyces cerevisiae EC1118]
gi|285813525|tpg|DAA09421.1| TPA: Sen2p [Saccharomyces cerevisiae S288c]
gi|323347496|gb|EGA81765.1| Sen2p [Saccharomyces cerevisiae Lalvin QA23]
gi|349579830|dbj|GAA24991.1| K7_Sen2p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365764382|gb|EHN05906.1| Sen2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392297624|gb|EIW08723.1| Sen2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 377
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 66/164 (40%), Gaps = 21/164 (12%)
Query: 81 EGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKE--TFPLLYKAYSHLRKKNWVVRSG 138
E +L +L L I + K L+Q+ K+ +F Y Y H R W VRSG
Sbjct: 224 EAMFLTFALPVLDISPACLAGK----LFQFDAKYKDIHSFVRSYVIYHHYRSHGWCVRSG 279
Query: 139 SQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLIL 198
++G D++ Y+ P H+E+ V+ G D + + W R+ GG KT ++
Sbjct: 280 IKFGCDYLLYKRGPPFQHAEFCVM----GLDHDVSKDYTW--YSSIARVVGGAKKTFVLC 333
Query: 199 TINK---------NGQGTATPSCLEQYAVEERTISRWSPEQCRE 233
+ + + + V E RW P + R+
Sbjct: 334 YVERLISEQEAIALWKSNNFTKLFNSFQVGEVLYKRWVPGRNRD 377
>gi|379003273|ref|YP_005258945.1| tRNA intron endonuclease [Pyrobaculum oguniense TE7]
gi|375158726|gb|AFA38338.1| tRNA intron endonuclease [Pyrobaculum oguniense TE7]
Length = 183
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 7/127 (5%)
Query: 77 LGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVR 136
L + E YL L++V + L + + K + F +YK Y + R +VV+
Sbjct: 50 LALYEALYLVER-GVLEVVTDSGEKITQTRLVELGREKLKNFDEIYKIYKYFRDLGYVVK 108
Query: 137 SGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLL 196
SG ++G F Y P + H+ V+V E + G + +DI RL V KT
Sbjct: 109 SGLKFGALFSVYEKGPGIDHAP-MVVVFLEPDKGISA-----TDITRGGRLGHSVKKTFT 162
Query: 197 ILTINKN 203
+ T+ KN
Sbjct: 163 LATVLKN 169
>gi|323304026|gb|EGA57806.1| Sen2p [Saccharomyces cerevisiae FostersB]
Length = 377
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 66/164 (40%), Gaps = 21/164 (12%)
Query: 81 EGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKE--TFPLLYKAYSHLRKKNWVVRSG 138
E +L +L L I + K L+Q+ K+ +F Y Y H R W VRSG
Sbjct: 224 EAMFLTFALPVLDISPACLAGK----LFQFDAKYKDIHSFVRSYVIYHHYRSHGWCVRSG 279
Query: 139 SQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLIL 198
++G D++ Y+ P H+E+ V+ G D + + W R+ GG KT ++
Sbjct: 280 IKFGCDYLLYKRGPPFQHAEFCVM----GLDHDVSKDYTW--YSSIARVVGGAKKTFVLC 333
Query: 199 TINK---------NGQGTATPSCLEQYAVEERTISRWSPEQCRE 233
+ + + + V E RW P + R+
Sbjct: 334 YVERLISEQEAIALWKSNNFTKLFNSFQVGEVLYKRWVPGRNRD 377
>gi|145592020|ref|YP_001154022.1| tRNA-splicing endonuclease subunit alpha [Pyrobaculum arsenaticum
DSM 13514]
gi|160380656|sp|A4WLV3.1|ENDA_PYRAR RecName: Full=tRNA-splicing endonuclease; AltName: Full=tRNA-intron
endonuclease
gi|145283788|gb|ABP51370.1| tRNA intron endonuclease [Pyrobaculum arsenaticum DSM 13514]
Length = 183
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 7/127 (5%)
Query: 77 LGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVR 136
L + E YL L++V + L + + K + F +YK Y + R +VV+
Sbjct: 50 LALYEALYLVER-GVLEVVTDSGEKITQTRLVELGREKLKNFDEIYKIYKYFRDLGYVVK 108
Query: 137 SGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLL 196
SG ++G F Y P + H+ V+V E + G + +DI RL V KT
Sbjct: 109 SGLKFGALFSVYEKGPGIDHAP-MVVVFLEPDKGISA-----TDITRGGRLGHSVKKTFT 162
Query: 197 ILTINKN 203
+ T+ KN
Sbjct: 163 LATVLKN 169
>gi|255718625|ref|XP_002555593.1| KLTH0G12936p [Lachancea thermotolerans]
gi|238936977|emb|CAR25156.1| KLTH0G12936p [Lachancea thermotolerans CBS 6340]
Length = 351
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 48/118 (40%), Gaps = 5/118 (4%)
Query: 120 LLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGE----NGRL 175
L Y AY H R W RSG ++G D++ YR P H+EY V VL + + G
Sbjct: 235 LKYVAYHHYRSHGWCARSGIKFGCDYLLYRRGPPFQHAEYGVKVLEACKPFDTTLFTGAA 294
Query: 176 RVWSDIHCTVRLCGGVAKTLLILTINKNGQGTATPSCLEQYAVEERTISRWSPEQCRE 233
RV S LC + + QG Y V E + RW P + R+
Sbjct: 295 RVLSGARKPFILCYVELQKPESEVLESWRQGRLD-KVFRSYKVGEVSYRRWVPGKNRD 351
>gi|403216786|emb|CCK71282.1| hypothetical protein KNAG_0G02240 [Kazachstania naganishii CBS
8797]
Length = 362
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 122 YKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDI 181
Y Y H R W VRSG ++G D++ Y+ P H+E+ ++VL D + + W
Sbjct: 248 YVTYHHYRSLGWCVRSGIKFGCDYLLYKRGPPFQHAEFCIMVL----DHDKSKDYTWYS- 302
Query: 182 HCTVRLCGGVAKTLLILTINK 202
R+ GG KT ++ + +
Sbjct: 303 -SISRVIGGAKKTCVLCYVER 322
>gi|321254564|ref|XP_003193118.1| tRNA-intron endonuclease [Cryptococcus gattii WM276]
gi|317459587|gb|ADV21331.1| tRNA-intron endonuclease, putative [Cryptococcus gattii WM276]
Length = 532
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 31/142 (21%)
Query: 122 YKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAE-------------GE 168
Y Y H R WVV+ G ++ VD++ YR P HS +A +++ GE
Sbjct: 392 YAVYHHFRSLGWVVKDGIKFCVDWLLYRRGPVFSHSAFACVIIPVYADPQDQVVSPYGGE 451
Query: 169 DGENGRLRVWSDIHCTVRLCGGVAKTLLILTIN-----------KNGQGTATP------S 211
D R+ W ++ +R+ V K ++ + I K GT P S
Sbjct: 452 DWYEERMS-WKWMNTIIRVNALVQKNVIAVYITIPPLSFFPPSMKLADGTLDPRKNDLKS 510
Query: 212 CLEQYAVEERTISRWSPEQCRE 233
L+QY + E ++R+ + R+
Sbjct: 511 LLKQYTIREVALTRFGATRRRD 532
>gi|167386396|ref|XP_001737738.1| tRNA-splicing endonuclease [Entamoeba dispar SAW760]
gi|165899342|gb|EDR25967.1| tRNA-splicing endonuclease, putative [Entamoeba dispar SAW760]
Length = 163
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 122 YKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDI 181
Y Y L+KK + ++ G +YG DFV Y+ HP HS + VL++ + N L
Sbjct: 73 YHLYCELKKKGFFIKDGFKYGCDFVVYKKHPQCCHSYFGVLLMNIHQSLINNELIGLC-- 130
Query: 182 HCTVRLCGGVAKTLLILTIN 201
RL V K LL+ N
Sbjct: 131 ----RLLHNVKKHLLLCNYN 146
>gi|134045496|ref|YP_001096982.1| tRNA-splicing endonuclease subunit alpha [Methanococcus maripaludis
C5]
gi|132663121|gb|ABO34767.1| tRNA splicing endonuclease [Methanococcus maripaludis C5]
Length = 176
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 8/134 (5%)
Query: 72 KQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKK 131
+ + L EG YL S + + + N + +E++ + + Y AY LR +
Sbjct: 38 ENFLSLSFVEGLYLV-SKNWISLKDKKNKLLSFEEVYDVAQNIDRKLCIRYLAYKDLRNR 96
Query: 132 NWVVRSGSQYGVDFVAY-RHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGG 190
+ VR+G +YG DF Y R + +HS Y V V +E E S+I VR+
Sbjct: 97 GYTVRTGLKYGSDFRLYERSNIDEIHSRYLVKVFSEEIPCE------ISEITGFVRVAHS 150
Query: 191 VAKTLLILTINKNG 204
V K L+I ++ +G
Sbjct: 151 VRKELIIAIVDADG 164
>gi|337284815|ref|YP_004624289.1| tRNA-splicing endonuclease subunit alpha [Pyrococcus yayanosii CH1]
gi|334900749|gb|AEH25017.1| tRNA-splicing endonuclease subunit alpha [Pyrococcus yayanosii CH1]
Length = 175
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 56/101 (55%), Gaps = 8/101 (7%)
Query: 105 DELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVL 164
+EL+ + + E F + + Y LR++ ++V+SG ++G + YR HS++ V V+
Sbjct: 72 EELFDLGRKRDEDFDVKFLVYRDLRERGYIVKSGLKFGSHYRVYRRGSE--HSDWLVWVV 129
Query: 165 AEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQ 205
EN +L +DI +R+ GV K++++ ++++G
Sbjct: 130 R-----ENAKLSP-NDITARIRVAHGVRKSMVMAVVDEDGD 164
>gi|45358695|ref|NP_988252.1| tRNA-splicing endonuclease subunit alpha [Methanococcus maripaludis
S2]
gi|54035935|sp|Q6LY59.1|ENDA_METMP RecName: Full=tRNA-splicing endonuclease; AltName: Full=tRNA-intron
endonuclease
gi|45047561|emb|CAF30688.1| tRNA-intron endonuclease [Methanococcus maripaludis S2]
Length = 177
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 8/134 (5%)
Query: 72 KQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKK 131
+ + L EG YL S + + ++ + +EL+ + + Y AY LR +
Sbjct: 39 ENFLSLSFVEGLYLV-SKNWISLRDKNKKLLSFEELFDVAQNIDRKLCIRYLAYKDLRNR 97
Query: 132 NWVVRSGSQYGVDFVAY-RHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGG 190
+ VR+G +YG DF Y R + +HS Y V V +E E S+I VR+
Sbjct: 98 GYTVRTGLKYGSDFRLYERSNIDEIHSRYLVKVFSEEIPCE------ISEITGFVRVAHS 151
Query: 191 VAKTLLILTINKNG 204
V K L+I ++ +G
Sbjct: 152 VRKELIIAIVDADG 165
>gi|352682773|ref|YP_004893297.1| tRNA intron endonuclease [Thermoproteus tenax Kra 1]
gi|350275572|emb|CCC82219.1| tRNA intron endonuclease [Thermoproteus tenax Kra 1]
Length = 182
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 72/180 (40%), Gaps = 15/180 (8%)
Query: 36 HAVLAGYSALLAVEAEQTELLNRACFGRHIVT-------AEKDKQWYQLGMEEGFYLCHS 88
VL G + ++ E + R +G+ ++ +K + L + E YL
Sbjct: 2 RGVLRGLAVVIEDPQEARAIYKRGFYGKFLLKDKVKLDEVDKLESPLVLALYEALYLAE- 60
Query: 89 LKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAY 148
+ + V ED+ +EL + + + F +Y Y H R ++V+SG ++G F Y
Sbjct: 61 -RGILEVYEDDKKIEIEELRKIGRENIKNFDDIYLIYKHFRDLGYIVKSGLKFGALFSVY 119
Query: 149 RHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGTA 208
P + H+ V+ L E R +DI RL V KT T+ K A
Sbjct: 120 EKGPGIDHAPMVVVFL------EPDRGISATDIARGGRLSHSVRKTFTFATVLKPSNEVA 173
>gi|340624455|ref|YP_004742908.1| tRNA-splicing endonuclease subunit alpha [Methanococcus maripaludis
X1]
gi|339904723|gb|AEK20165.1| tRNA-splicing endonuclease subunit alpha [Methanococcus maripaludis
X1]
Length = 176
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 8/134 (5%)
Query: 72 KQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKK 131
+ + L EG YL S + + ++ + +EL+ + + Y AY LR +
Sbjct: 38 ENFLSLSFVEGLYLV-SKNWISLRDKNKKLLSFEELFDVAQNIDRKLCIRYLAYKDLRNR 96
Query: 132 NWVVRSGSQYGVDFVAY-RHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGG 190
+ VR+G +YG DF Y R + +HS Y V V +E E S+I VR+
Sbjct: 97 GYTVRTGLKYGSDFRLYERSNIDEIHSRYLVKVFSEEIPCE------ISEITGFVRVAHS 150
Query: 191 VAKTLLILTINKNG 204
V K L+I ++ +G
Sbjct: 151 VRKELIIAIVDADG 164
>gi|150401438|ref|YP_001325204.1| tRNA-splicing endonuclease subunit alpha [Methanococcus aeolicus
Nankai-3]
gi|150014141|gb|ABR56592.1| tRNA intron endonuclease [Methanococcus aeolicus Nankai-3]
Length = 174
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 7/102 (6%)
Query: 105 DELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAY-RHHPSLVHSEYAVLV 163
+EL+ Y E + Y Y LR + + V++G +YG DF Y R + + +HSE+ V V
Sbjct: 68 EELYDYAHNIDEKICIKYLVYRDLRNRGYTVKTGLKYGSDFRLYSRENINAIHSEFVVKV 127
Query: 164 LAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQ 205
+E + S++ VR+ V K L+I ++ +G
Sbjct: 128 FSEDKPC------AISELTGFVRVAHSVRKKLIISIVDDDGD 163
>gi|328781555|ref|XP_003249995.1| PREDICTED: tRNA-splicing endonuclease subunit Sen34-like [Apis
mellifera]
Length = 299
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 108 WQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEG 167
W+Y K+ L YK Y +L +K + V SG ++G DF+ Y P + HS++ +L E
Sbjct: 193 WKYPSNYKQQ--LRYKTYKNLWEKGYYVSSGEKFGGDFLVYPGDPIMFHSQFIILCKHEN 250
Query: 168 EDGENGRLRVWSDIHCTVR 186
E+ L I C VR
Sbjct: 251 EEIPITELSAQCRIACHVR 269
>gi|336121528|ref|YP_004576303.1| tRNA-splicing endonuclease [Methanothermococcus okinawensis IH1]
gi|334856049|gb|AEH06525.1| tRNA-splicing endonuclease [Methanothermococcus okinawensis IH1]
Length = 174
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
Query: 105 DELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAY-RHHPSLVHSEYAVLV 163
+EL+ Y E + Y Y LR + + V++G +YG D+ Y R + +HSEY V V
Sbjct: 68 EELYDYAHNIDEKLCIKYLVYKDLRNRGYTVKTGLKYGSDYRLYSRENIDEIHSEYLVKV 127
Query: 164 LAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQ 205
+E R S++ VR+ V K L+I ++ +G
Sbjct: 128 FSE------DRPCAISELTGFVRVAHSVRKKLIIAIVDDDGD 163
>gi|374326042|ref|YP_005084242.1| tRNA intron endonuclease [Pyrobaculum sp. 1860]
gi|356641311|gb|AET31990.1| tRNA intron endonuclease [Pyrobaculum sp. 1860]
Length = 183
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 7/127 (5%)
Query: 77 LGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVR 136
L + E YL + L+++ E ++L + +++ + F +YK Y + R +VV+
Sbjct: 50 LALYEALYLAERGR-LRVMAEGGEEVPPEKLAELGRSRLKNFDEIYKIYRYFRDLGYVVK 108
Query: 137 SGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLL 196
SG ++G F Y P + H+ V+V E + G + +DI RL V KT
Sbjct: 109 SGLKFGALFSVYEKGPGIDHAP-MVVVFLEPDKGISA-----TDITRGGRLGHSVKKTFT 162
Query: 197 ILTINKN 203
+ T+ K
Sbjct: 163 LATVLKQ 169
>gi|340713319|ref|XP_003395192.1| PREDICTED: tRNA-splicing endonuclease subunit Sen34-like [Bombus
terrestris]
Length = 299
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%)
Query: 100 STKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEY 159
+ +ND E+ ++ E L YK Y L ++ + V +G ++G DF+AY P + HS++
Sbjct: 183 TDENDIEIIEWKYPSNEKQQLRYKTYKDLWERGYYVTNGEKFGGDFLAYPGDPIMFHSQF 242
Query: 160 AVLVLAEGEDGENGRLRVWSDIHCTVR 186
+L + E+ L I C VR
Sbjct: 243 IILCKDKKEEIPITELSAQCRIACHVR 269
>gi|350404941|ref|XP_003487267.1| PREDICTED: tRNA-splicing endonuclease subunit Sen34-like [Bombus
impatiens]
Length = 299
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%)
Query: 100 STKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEY 159
+ +ND E+ ++ E L YK Y L ++ + V +G ++G DF+AY P + HS++
Sbjct: 183 TDENDIEIIEWKYPSNEKQQLRYKTYKDLWERGYYVTNGEKFGGDFLAYPGDPIMFHSQF 242
Query: 160 AVLVLAEGEDGENGRLRVWSDIHCTVR 186
+L + E+ L I C VR
Sbjct: 243 IILCKDKKEEIPITELSAQCRIACHVR 269
>gi|320100441|ref|YP_004176033.1| tRNA intron endonuclease [Desulfurococcus mucosus DSM 2162]
gi|319752793|gb|ADV64551.1| tRNA intron endonuclease [Desulfurococcus mucosus DSM 2162]
Length = 145
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Query: 76 QLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVV 135
+L + E YL + + G+ + EL K F LY Y LR++ +
Sbjct: 14 ELSLIEALYLVEMNRVAVLQGDRQLAQG--ELRDIALGKIPRFEELYAVYRDLRRRGLIP 71
Query: 136 RSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGE 168
R G ++G D++ YRH P + H+ + V V E
Sbjct: 72 RRGLKFGCDYLVYRHGPGIDHAPFGVQVFRVNE 104
>gi|118576229|ref|YP_875972.1| tRNA splicing endonuclease [Cenarchaeum symbiosum A]
gi|118194750|gb|ABK77668.1| tRNA splicing endonuclease [Cenarchaeum symbiosum A]
Length = 177
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Query: 77 LGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVR 136
L M EG YL + K V D+EL + +++ F Y Y R K ++V
Sbjct: 47 LDMMEGLYLSRAGKI--TVYRSKKRVPDEELAEKCRSEYHNFEKKYAVYCDFRDKGYIVS 104
Query: 137 SGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGED 169
G ++G DF Y P + H+ Y V V +G+D
Sbjct: 105 PGIKFGCDFAVYERGPGIDHAPYLVQVY-DGKD 136
>gi|366997893|ref|XP_003683683.1| hypothetical protein TPHA_0A01660 [Tetrapisispora phaffii CBS 4417]
gi|357521978|emb|CCE61249.1| hypothetical protein TPHA_0A01660 [Tetrapisispora phaffii CBS 4417]
Length = 370
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 82/202 (40%), Gaps = 29/202 (14%)
Query: 46 LAVEAEQTELLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDN-----S 100
L V+ E E++N I+ E +L E +L ++L L ED
Sbjct: 184 LIVKFEDDEIINDQ---NEIINLES----LELLPVEAIFLTYALPVLDTKLEDLFNILLR 236
Query: 101 TKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYA 160
D+E + Y E Y Y H R + W VRSG ++G +++ Y+ P H+++
Sbjct: 237 KSQDNEAYSYNNI--ENIVKQYLIYHHYRSRGWSVRSGIKFGCEYLLYKRGPPFQHAQFC 294
Query: 161 VLVLAEGEDGE----NGRLRVWSDIHCTVRLCGGVAKTL-----LILTINKNGQGTATPS 211
V+ L E + RV S+ ++ LC +TL +I NK S
Sbjct: 295 VMSLGYEESKPYEWYSSLSRVTSNAKKSLILC--YIETLKNEDEIIKLWNKQDYT----S 348
Query: 212 CLEQYAVEERTISRWSPEQCRE 233
Y + E +RW P + R+
Sbjct: 349 VFSSYRISEVVYNRWMPGKNRD 370
>gi|57642150|ref|YP_184628.1| tRNA-splicing endonuclease subunit alpha [Thermococcus kodakarensis
KOD1]
gi|73919332|sp|Q5JHP5.1|ENDA_PYRKO RecName: Full=tRNA-splicing endonuclease; AltName: Full=tRNA-intron
endonuclease
gi|57160474|dbj|BAD86404.1| archaeal tRNA-intron endonuclease [Thermococcus kodakarensis KOD1]
Length = 168
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 105 DELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVL 164
+E+ +A+ E F Y Y LR + + V+SG ++G F YR HSE+ V V+
Sbjct: 64 EEIMNLGRARDELFDAKYLVYKDLRDRGYTVKSGLKFGSHFRVYRRGME-EHSEWLVWVV 122
Query: 165 AEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGT 207
EN RL +DI VR+ GV K +++ ++++ T
Sbjct: 123 P-----ENSRLSP-NDITARVRVAHGVRKNMIMAIVDEDADVT 159
>gi|302347835|ref|YP_003815473.1| tRNA-splicing endonuclease subunit alpha [Acidilobus saccharovorans
345-15]
gi|302328247|gb|ADL18442.1| tRNA-splicing endonuclease subunit alpha [Acidilobus saccharovorans
345-15]
Length = 187
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 81 EGFYLCHSLKCLKIVGEDNSTKNDDELWQYM--KAKKETFPLLYKAYSHLRKKNWVVRSG 138
E YL +++ GED + L + + ++E LLY++ LR + VVRSG
Sbjct: 59 EALYLVER-GMIEVEGEDGRVLDFSGLREALGLTGRQEKLYLLYRS---LRSRGLVVRSG 114
Query: 139 SQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLIL 198
+YG FVAYR P L H+ + + E + ++ RL V KT ++
Sbjct: 115 LKYGASFVAYRKGPGLEHAPFIIHYYDPDEPFDP------VELVRAGRLSHSVKKTFIVA 168
Query: 199 TINKNGQ 205
T + G+
Sbjct: 169 TTGQVGE 175
>gi|405118946|gb|AFR93719.1| tRNA-intron endonuclease [Cryptococcus neoformans var. grubii H99]
Length = 528
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 24/135 (17%)
Query: 122 YKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLA-------------EGE 168
Y Y H R WVV+ G ++ VD++ YR P HS +A +++ GE
Sbjct: 395 YAVYHHFRSLGWVVKDGIKFCVDWLLYRRGPVFSHSAFACVIIPVYTDTHDQAVSPYGGE 454
Query: 169 DGENGRLRVWSDIHCTVRLCGGVAKTLLIL---TIN-KNGQGTATP------SCLEQYAV 218
D R+ W ++ +R V T+ L T N K GT P S LE+Y +
Sbjct: 455 DWYEERMS-WKWMNTVIRNVIAVYITIPPLSSFTSNLKLADGTLDPRKNDLKSLLERYTI 513
Query: 219 EERTISRWSPEQCRE 233
E ++R+ + R+
Sbjct: 514 REVALTRFGATRRRD 528
>gi|389851861|ref|YP_006354095.1| tRNA-splicing endonuclease subunit alpha [Pyrococcus sp. ST04]
gi|388249167|gb|AFK22020.1| putative tRNA-splicing endonuclease subunit alpha [Pyrococcus sp.
ST04]
Length = 170
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Query: 105 DELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVL 164
DE++ K + E F + + Y LR + ++V+SG ++G F YR HS++ + VL
Sbjct: 67 DEVFSLGKKRDEDFDIKFLVYKDLRDRGYIVKSGLKFGSHFRVYRKGAE--HSDWLIWVL 124
Query: 165 AEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQ 205
EN +L +DI R+ GV K++++ ++++
Sbjct: 125 R-----ENQKLSP-NDITARARVAHGVRKSMIMAIVDEDND 159
>gi|297619352|ref|YP_003707457.1| tRNA intron endonuclease [Methanococcus voltae A3]
gi|297378329|gb|ADI36484.1| tRNA intron endonuclease [Methanococcus voltae A3]
Length = 182
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 10/136 (7%)
Query: 73 QWYQLGMEEGFYLCHS--LKCLKIVGEDNSTKND-DELWQYMKAKKETFPLLYKAYSHLR 129
+ L + EG YL + + K +D TK D +EL++ + Y Y LR
Sbjct: 41 NFLSLSLVEGLYLTYKEWIVVSKGNKKDGYTKIDFEELFELVNEINPKLCSKYLVYRDLR 100
Query: 130 KKNWVVRSGSQYGVDFVAY-RHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLC 188
+ + VR+G +YG DF Y R++ +HS+Y V V E E S++ VR+
Sbjct: 101 TRGYTVRTGLKYGSDFRLYERNNIDEIHSKYLVKVFTEEMPCE------LSEMTGFVRVA 154
Query: 189 GGVAKTLLILTINKNG 204
V K L++ ++ +G
Sbjct: 155 HSVKKQLIVAILDADG 170
>gi|386875810|ref|ZP_10117969.1| tRNA intron endonuclease [Candidatus Nitrosopumilus salaria BD31]
gi|386806566|gb|EIJ66026.1| tRNA intron endonuclease [Candidatus Nitrosopumilus salaria BD31]
Length = 178
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Query: 77 LGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVR 136
L + EG YL + K + + N + DE+ + K + F Y Y + R K +++
Sbjct: 47 LDLIEGLYLLENKKI--TINKTNQKISVDEMIEICKKEVHEFDKKYLVYKNFRDKGYIIN 104
Query: 137 SGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVR 186
G ++G DF Y P + H+ + + V E + + + + TVR
Sbjct: 105 PGIKFGCDFAVYEKGPGIDHAPFLIQVYNRSESITSTGIVLAGRLATTVR 154
>gi|330833955|ref|YP_004408683.1| tRNA-splicing endonuclease subunit alpha [Metallosphaera cuprina
Ar-4]
gi|329566094|gb|AEB94199.1| tRNA-splicing endonuclease subunit alpha [Metallosphaera cuprina
Ar-4]
Length = 182
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 76 QLGMEEGFYLCHSLKCLKI--VGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNW 133
+L + EG +L LK+ +G+ S ++ + + AK F LY Y L+++ +
Sbjct: 49 ELSLLEGLFLAEQ-DILKVSHLGKVMSVQDIESYANSIIAK---FKPLYLVYKDLKRRGF 104
Query: 134 VVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGE 168
+VRSG ++G DF Y P + H+ + + VL E
Sbjct: 105 IVRSGIKFGADFAIYTLGPGIEHAPFVISVLDGSE 139
>gi|156543555|ref|XP_001603407.1| PREDICTED: tRNA-splicing endonuclease subunit Sen34-like [Nasonia
vitripennis]
Length = 302
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 106 ELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLA 165
E W Y ++E+F YK + + ++ + V SG ++G DF+AY P + HS+ +++
Sbjct: 194 EQWNYPSNEEESF--RYKVFKDIWEQGFYVTSGQKFGCDFLAYPGDPIMFHSQ--LMIQC 249
Query: 166 EGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQ 205
+ + E L + S+ R+ V KTL+ T++K+G+
Sbjct: 250 KNRNEELPVLELISE----CRIGSHVRKTLVYATLSKDGE 285
>gi|167045652|gb|ABZ10300.1| putative tRNA intron endonuclease, catalytic C-terminal domain
protein [uncultured marine crenarchaeote
HF4000_APKG10L15]
Length = 179
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 6/123 (4%)
Query: 51 EQTELLNRACFGRHIVTAEKDKQWYQ----LGMEEGFYLCHSLKCLKIVGEDNSTKNDDE 106
E +L FG+ I + + L + EG YL + K +KI +D + D
Sbjct: 17 ESRDLFANGYFGKPIGIPKPNVNDINVPLILDLIEGCYLQETSK-IKIT-KDGKKVSLDA 74
Query: 107 LWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAE 166
L + + + F Y+ Y R+K +V+ G ++G DF Y+ P + H+ Y V V +
Sbjct: 75 LIKICRKEYHNFGKKYQVYKDFREKGYVINPGIKFGCDFAVYQKGPGIDHAPYLVQVYNK 134
Query: 167 GED 169
+D
Sbjct: 135 NDD 137
>gi|429962557|gb|ELA42101.1| hypothetical protein VICG_00742 [Vittaforma corneae ATCC 50505]
Length = 114
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 127 HLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVR 186
HL + V G +YG+D +AY PS VHS+Y V++ NG + + R
Sbjct: 16 HLESLGFSVNDGIKYGLDLLAYTDDPSRVHSKYGVII-------SNG--MTFQQLVAYQR 66
Query: 187 LCGGVAKTLLILTINK 202
+C KTLLI +N+
Sbjct: 67 ICTSNNKTLLIALVNQ 82
>gi|380011166|ref|XP_003689682.1| PREDICTED: tRNA-splicing endonuclease subunit Sen34-like [Apis
florea]
Length = 299
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 108 WQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEG 167
W+Y K+ L YK Y L +K + V SG ++G DF+ Y P + HS++ +L E
Sbjct: 193 WKYPFNYKQQ--LRYKTYQDLWEKGYYVSSGEKFGGDFLVYPGDPIMFHSQFIILCKHEN 250
Query: 168 EDGENGRLRVWSDIHCTVR 186
E+ L I C VR
Sbjct: 251 EEIPITELSAQCRIACHVR 269
>gi|240104113|ref|YP_002960422.1| tRNA-splicing endonuclease subunit alpha [Thermococcus
gammatolerans EJ3]
gi|259645866|sp|C5A2D9.1|ENDA_THEGJ RecName: Full=tRNA-splicing endonuclease; AltName: Full=tRNA-intron
endonuclease
gi|239911667|gb|ACS34558.1| tRNA-splicing endonuclease (endA) [Thermococcus gammatolerans EJ3]
Length = 168
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 105 DELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVL 164
+EL + + E F Y Y LR + + V+SG ++G F YR HS++ V VL
Sbjct: 64 EELMNLGRERDELFDAKYLVYKDLRDRGYTVKSGLKFGSHFRVYRRGMD-EHSQWLVWVL 122
Query: 165 AEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGT 207
EN RL +DI VR+ GV K +++ ++++ T
Sbjct: 123 P-----ENSRLSP-NDITARVRVAHGVRKNMIMAIVDEDADVT 159
>gi|156381253|ref|XP_001632180.1| predicted protein [Nematostella vectensis]
gi|156219232|gb|EDO40117.1| predicted protein [Nematostella vectensis]
Length = 70
Score = 45.4 bits (106), Expect = 0.021, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 81 EGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQ 140
+ F+L + L CL ++ ++ N +++WQ A F Y Y +LR K WV ++G +
Sbjct: 8 QAFFLSYGLGCLCVLDKEREM-NLNDMWQAFCAASPDFLQKYIVYHYLRSKGWVPKTGLK 66
Query: 141 YGVD 144
YG D
Sbjct: 67 YGTD 70
>gi|223477915|ref|YP_002582179.1| tRNA-intron endonuclease [Thermococcus sp. AM4]
gi|214033141|gb|EEB73969.1| tRNA-intron endonuclease [Thermococcus sp. AM4]
Length = 168
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 105 DELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVL 164
+EL + + E F Y Y LR + + V+SG ++G F YR HS++ V VL
Sbjct: 64 EELMNLGRKRDELFDAKYLVYKDLRDRGYTVKSGLKFGSHFRVYRRGMD-EHSQWLVWVL 122
Query: 165 AEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGT 207
EN RL +DI VR+ GV K +++ ++++ T
Sbjct: 123 P-----ENSRLSP-NDITARVRVAHGVRKNMVMAIVDEDADVT 159
>gi|448312745|ref|ZP_21502481.1| tRNA splicing endonuclease [Natronolimnobius innermongolicus JCM
12255]
gi|445600436|gb|ELY54447.1| tRNA splicing endonuclease [Natronolimnobius innermongolicus JCM
12255]
Length = 353
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 75/178 (42%), Gaps = 29/178 (16%)
Query: 54 ELLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKA 113
EL +A +G+ + E D+ Q + E YL I E + + + +
Sbjct: 202 ELYEKAFYGQPLEGREYDEPTLQCSLLEAAYLAERGA---IALEPETLRE-----RGREV 253
Query: 114 KKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPS---LVHSEYAVLVLAEGEDG 170
+ E F Y+ LR+++ V ++G ++G DF Y S L HSE V V +G
Sbjct: 254 EGERFDRRLAVYTALRERDIVPKTGYKFGADFRTYADVASVDDLGHSELLVRVHPDGVVF 313
Query: 171 ENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGTATPSCLEQYAVEERTISRWSP 228
E D+ VRL GV KT++ ++ +G +E R+I R +P
Sbjct: 314 EP------RDLALDVRLAHGVRKTMVFALVDDDG------------GIEWRSIERLTP 353
>gi|15384025|gb|AAK96103.1|AF393466_41 tRNA intron endonuclease [uncultured crenarchaeote 74A4]
Length = 178
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 50/120 (41%), Gaps = 8/120 (6%)
Query: 77 LGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVR 136
L + EG YL + K + + +EL + K F Y Y H R K +++
Sbjct: 47 LDLIEGLYLLKNKKIT--INKLKKKITVEELIEIGKNAYFDFENKYLVYKHFRDKGYIIN 104
Query: 137 SGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLL 196
G ++G DF Y P + HS Y + V G N + ++I T RL V K +
Sbjct: 105 PGIKFGCDFAVYEKGPGIDHSPYLIQVY-----GRNDTIPA-TEITITGRLASSVRKQFI 158
>gi|58265292|ref|XP_569802.1| tRNA-intron endonuclease [Cryptococcus neoformans var. neoformans
JEC21]
gi|134109057|ref|XP_776643.1| hypothetical protein CNBC1360 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259323|gb|EAL21996.1| hypothetical protein CNBC1360 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226034|gb|AAW42495.1| tRNA-intron endonuclease, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 533
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 58/292 (19%), Positives = 111/292 (38%), Gaps = 76/292 (26%)
Query: 8 RASEAKSSGRSHVQNHLRFTF-----LSIQSEAHAVLAGYSALLAVEAEQTELLNRACFG 62
R +S ++ VQ++ + ++ S A A + +EAE+ F
Sbjct: 252 RRRPPQSQAQAQVQDNTDTSVATPAVVTAPSTEQTTQAPADADVDMEAEED------LFD 305
Query: 63 RHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDN-----STKNDDELWQYMK----- 112
+V ++ ++ QL +EE +L ++ L++ T N + + +K
Sbjct: 306 ESLV---EEMEYLQLSIEESLFLSLAIGVLRVYDPSTGMYLTPTSNSADAGELLKLLLPR 362
Query: 113 -------------AKKETFPLL--------YKAYSHLRKKNWVVRSGSQYGVDFVAYRHH 151
++ + PLL Y Y H R WVV+ G ++ VD++ YR
Sbjct: 363 PSPSSPLSAQLSVSEGKGAPLLPDNPALVSYAVYHHFRSLGWVVKDGIKFCVDWLLYRRG 422
Query: 152 PSLVHSEYAVLVLA-------------EGEDGENGRLRVWSDIHCTVRLCGGVAKTLLIL 198
P HS +A +++ GED ++ W ++ +R+ V K ++ +
Sbjct: 423 PVFSHSAFACVIIPVYADTHDQAVSPYGGEDWYEEKMS-WKWMNTVIRVNALVQKNVIAV 481
Query: 199 TIN-----------KNGQGTATP------SCLEQYAVEERTISRWSPEQCRE 233
I K GT P S L+ Y + E ++R+ + R+
Sbjct: 482 YITIPPISSFPSNLKLADGTLDPKKNDLKSLLKSYTIREVALTRFGATRRRD 533
>gi|73667898|ref|YP_303913.1| tRNA splicing endonuclease [Methanosarcina barkeri str. Fusaro]
gi|121695959|sp|Q46FK9.1|ENDA_METBF RecName: Full=tRNA-splicing endonuclease; AltName: Full=tRNA-intron
endonuclease
gi|72395060|gb|AAZ69333.1| tRNA-intron endonuclease [Methanosarcina barkeri str. Fusaro]
Length = 350
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 16/157 (10%)
Query: 45 LLAVEAEQTE-LLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKN 103
++A +A+ +E L R +G+ + D + QL + E YL S + + +
Sbjct: 188 VIAWDAQASETLYKRGFYGKML-----DSERLQLSLVESLYLF-SRGIITVRDRKGKVFS 241
Query: 104 DDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPS---LVHSEYA 160
DE + + F Y AY +LR VV++G ++G +F YR S + HSEY
Sbjct: 242 FDEFIEKASEIESFFLRKYSAYKNLRDSGHVVKTGFKFGTNFRVYRKVESIEKIPHSEY- 300
Query: 161 VLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLI 197
LV A D E RL V S VRL V K +L
Sbjct: 301 -LVNAIPADFEF-RLSVMS---GAVRLANSVRKKMLF 332
>gi|448629851|ref|ZP_21672746.1| tRNA splicing endonuclease [Haloarcula vallismortis ATCC 29715]
gi|445757272|gb|EMA08627.1| tRNA splicing endonuclease [Haloarcula vallismortis ATCC 29715]
Length = 341
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 75/173 (43%), Gaps = 21/173 (12%)
Query: 54 ELLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKA 113
EL +A +G+ + D+ QL + E YL L + G + + + +
Sbjct: 185 ELYEQAFYGQRL----DDEGAVQLSLVEAAYLARE-GLLTVEGGAAAV-----VERGREV 234
Query: 114 KKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPS---LVHSEYAVLVLAEGEDG 170
+ + F Y+ LR ++G ++G DF Y S L HSE V VL G
Sbjct: 235 EGDRFDRRLAVYAALRGSGVAPKTGFKFGADFRTYADVESAENLGHSELLVRVLPAGHRF 294
Query: 171 ENGRLRVWSDIHCTVRLCGGVAKTLLI-LTINKNGQGTATPSCLEQYAVEERT 222
E D+ VRL GV KT++ LT + G+GT + S +E AVE T
Sbjct: 295 EP------RDLALDVRLAHGVRKTMMFALTADSGGEGTDSDS-IEWIAVERLT 340
>gi|301611009|ref|XP_002935038.1| PREDICTED: tRNA-splicing endonuclease subunit Sen34 [Xenopus
(Silurana) tropicalis]
Length = 308
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 108 WQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEG 167
W Y K+ + YK + L +K + + SGS++G DF+ Y P H+ + +
Sbjct: 207 WPYAGQKEHE--VRYKVFKSLWQKGYFLTSGSKFGGDFLVYPGDPMRFHAHFIAICFPYK 264
Query: 168 EDGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGTAT 209
E+ SDI RL V KT+L+ + ++ G+ T T
Sbjct: 265 EE------IPLSDIVTAGRLGTNVKKTVLLCSADEGGEVTFT 300
>gi|448367365|ref|ZP_21555131.1| tRNA splicing endonuclease [Natrialba aegyptia DSM 13077]
gi|445652984|gb|ELZ05857.1| tRNA splicing endonuclease [Natrialba aegyptia DSM 13077]
Length = 397
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 9/114 (7%)
Query: 112 KAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPS---LVHSEYAVLVLAEGE 168
+ + E F + Y+ LR++ V ++G ++G DF Y S L HSE V V G
Sbjct: 289 EVEGERFDRRLRVYTELREREIVPKTGYKFGADFRTYAEVESVAELGHSELLVRVHPAGA 348
Query: 169 DGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGTATPSCLEQYAVEERT 222
E D+ VRL GV KT++ + ++ T S +E +++E T
Sbjct: 349 VFEP------RDLALDVRLAHGVRKTMVFALVERDDGATPAESDIEWWSIERLT 396
>gi|401825731|ref|XP_003886960.1| putative tRNA-intron endonuclease [Encephalitozoon hellem ATCC
50504]
gi|392998117|gb|AFM97979.1| putative tRNA-intron endonuclease [Encephalitozoon hellem ATCC
50504]
Length = 100
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 111 MKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDG 170
MK +E +L + + ++ +VV G +YGVD + Y PS VHS+Y +L+
Sbjct: 1 MKTHQEKREVLKRMFE---EEGFVVGDGLKYGVDLLLYTDKPSRVHSKYGILI------- 50
Query: 171 ENGRLRVWSDIHCTVRLCGGVAKTLLIL 198
R + DI R C V KTL+++
Sbjct: 51 --DRRHSFLDIVGAQRTCTSVNKTLVVV 76
>gi|150399206|ref|YP_001322973.1| tRNA-splicing endonuclease subunit alpha [Methanococcus vannielii
SB]
gi|160380655|sp|A6UPD9.1|ENDA_METVS RecName: Full=tRNA-splicing endonuclease; AltName: Full=tRNA-intron
endonuclease
gi|150011909|gb|ABR54361.1| tRNA intron endonuclease [Methanococcus vannielii SB]
Length = 177
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Query: 79 MEEGFYLCHSLKCLKIVGED--------NSTKNDDELWQYMKAKKETFPLLYKAYSHLRK 130
+ E F ++ L +V +D N + +EL + + + Y Y LR
Sbjct: 37 LHENFLSLSYVEALYLVAKDWVLIRDKKNKILSFEELHEIAHVIDKKLCIRYLVYKDLRN 96
Query: 131 KNWVVRSGSQYGVDFVAY-RHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCG 189
+ + VR+G +YG DF Y R + VHS+Y V V +E E S+I VR+
Sbjct: 97 RGYTVRTGLKYGSDFRLYERSNIDEVHSKYLVKVFSEEIPCE------ISEITGFVRVAH 150
Query: 190 GVAKTLLILTINKNG 204
V K L+I ++ +G
Sbjct: 151 SVRKELVIAIVDADG 165
>gi|448315597|ref|ZP_21505238.1| tRNA splicing endonuclease [Natronococcus jeotgali DSM 18795]
gi|445610969|gb|ELY64732.1| tRNA splicing endonuclease [Natronococcus jeotgali DSM 18795]
Length = 345
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 17/154 (11%)
Query: 54 ELLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKA 113
EL +G+ + E D+ Q + E YL + D +T + + +
Sbjct: 195 ELYEETFYGQPLEGREYDEPTLQCSLLEAAYLAEG----GAIDLDPATVRE----RGREV 246
Query: 114 KKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPS---LVHSEYAVLVLAEGEDG 170
+ E F ++ Y+ LR++ V ++G ++G DF Y S L HSE V V
Sbjct: 247 EGERFDRRFRVYTELRERGVVPKTGYKFGADFRTYADVESVDDLGHSELLVRVHPADHVF 306
Query: 171 ENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNG 204
E D+ VRL GV KT+++ + +NG
Sbjct: 307 EP------RDVALDVRLAHGVRKTMVVALVGENG 334
>gi|396081082|gb|AFN82701.1| tRNA-intron endonuclease [Encephalitozoon romaleae SJ-2008]
Length = 108
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 12/87 (13%)
Query: 111 MKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDG 170
MK +E L + + ++ +VV G +YGVD + Y PS VHS Y VL+
Sbjct: 1 MKTHQEKREALRRMFE---EEGFVVGDGLKYGVDLLVYTDKPSRVHSRYGVLI------- 50
Query: 171 ENGRLRVWSDIHCTVRLCGGVAKTLLI 197
R + DI R C V KTL++
Sbjct: 51 --DRRHSFLDIVGAQRTCTSVNKTLVV 75
>gi|365759486|gb|EHN01271.1| Sen2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 377
Score = 43.9 bits (102), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 19/110 (17%)
Query: 117 TFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLR 176
+F Y Y H R W VRSG ++G D++ Y+ P H+E+ ++ G D + +
Sbjct: 258 SFVRSYVIYHHYRSHGWCVRSGIKFGCDYLLYKRGPPFQHAEFCIM----GLDYDICKDY 313
Query: 177 VWSDIHCTVRLCGGVAKTLLILTINKNGQGTATPSCLEQYAVEERTISRW 226
W R+ G KT ++ + E+ EE IS W
Sbjct: 314 TW--YSSIARVAGAAKKTFVLCYV-------------ERLISEEEAISLW 348
>gi|448611435|ref|ZP_21662069.1| tRNA splicing endonuclease [Haloferax mucosum ATCC BAA-1512]
gi|445743867|gb|ELZ95348.1| tRNA splicing endonuclease [Haloferax mucosum ATCC BAA-1512]
Length = 354
Score = 43.9 bits (102), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 60/154 (38%), Gaps = 17/154 (11%)
Query: 55 LLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAK 114
L FG+ + D QL + E YL L I D + D +
Sbjct: 204 LYQGGFFGQRLYGRNADSGPLQLSLLEAAYLARQ-DVLAIDEADVISCGHD-------VE 255
Query: 115 KETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPS---LVHSEYAVLVLAEGEDGE 171
E F Y+ LR+ V +SG ++G DF Y + L HSE+ V V+
Sbjct: 256 GERFDRRLAVYASLREMQTVPKSGFKFGSDFRVYTDFETVDDLSHSEFLVRVVTPDH--- 312
Query: 172 NGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQ 205
V D+ VRL GGV K ++ + NG+
Sbjct: 313 ---TFVPRDLSLDVRLAGGVRKRMVFALTDANGE 343
>gi|21226614|ref|NP_632536.1| tRNA splicing endonuclease [Methanosarcina mazei Go1]
gi|54035944|sp|Q8PZI1.1|ENDA_METMA RecName: Full=tRNA-splicing endonuclease; AltName: Full=tRNA-intron
endonuclease
gi|20904892|gb|AAM30208.1| tRNA-intron endonuclease [Methanosarcina mazei Go1]
Length = 353
Score = 43.5 bits (101), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 64/146 (43%), Gaps = 15/146 (10%)
Query: 55 LLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAK 114
L +R +G+ + D + QL + E YL S + + + DE +
Sbjct: 202 LYSRGFYGKML-----DPERLQLSLVESLYLF-SRGVIVVRDRKGKIFSFDEFVEKASEI 255
Query: 115 KETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPS---LVHSEYAVLVLAEGEDGE 171
+ +F Y AY LR VV++G ++G F YR S + HSEY V V+ ED E
Sbjct: 256 EGSFLRKYSAYKALRDSGHVVKTGFKFGTHFRVYRKVESIEKIPHSEYLVNVIP--EDYE 313
Query: 172 NGRLRVWSDIHCTVRLCGGVAKTLLI 197
RL V S VRL V K +L
Sbjct: 314 F-RLPVMS---GAVRLANSVRKRMLF 335
>gi|18976638|ref|NP_577995.1| tRNA-splicing endonuclease subunit alpha [Pyrococcus furiosus DSM
3638]
gi|397650764|ref|YP_006491345.1| tRNA-splicing endonuclease subunit alpha [Pyrococcus furiosus COM1]
gi|54035948|sp|Q8U429.1|ENDA_PYRFU RecName: Full=tRNA-splicing endonuclease; AltName: Full=tRNA-intron
endonuclease
gi|18892209|gb|AAL80390.1| putative tRNA-intron endonuclease [Pyrococcus furiosus DSM 3638]
gi|393188355|gb|AFN03053.1| tRNA-splicing endonuclease subunit alpha [Pyrococcus furiosus COM1]
Length = 170
Score = 43.5 bits (101), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 112 KAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGE 171
K K E F + Y Y LR + ++V+S ++G + YR HS++ V V+ E +
Sbjct: 74 KKKDEDFDVKYLVYKDLRDRGYIVKSALKFGSHYRVYRKGAE--HSDWLVWVVRESQKLS 131
Query: 172 NGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQ 205
+DI R+ GV KT+++ ++++G
Sbjct: 132 P------NDITARARVAHGVRKTMVLAVVDEDGD 159
>gi|159040932|ref|YP_001540184.1| tRNA-splicing endonuclease subunit alpha [Caldivirga maquilingensis
IC-167]
gi|157919767|gb|ABW01194.1| tRNA intron endonuclease [Caldivirga maquilingensis IC-167]
Length = 192
Score = 43.1 bits (100), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 58/123 (47%), Gaps = 8/123 (6%)
Query: 81 EGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQ 140
E YL L L++V ++ S L ++++ + E L+Y+ Y + R + +VVRSG +
Sbjct: 66 EALYLV-ELGLLEVV-DNGSVVGRGTLKEFVEGRYEHGELVYELYKYFRDRGYVVRSGLK 123
Query: 141 YGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTI 200
+G + Y P + H+ V ++ + GR D+ RL V KT ++
Sbjct: 124 FGSLYAVYEKGPGIDHAPMLVHLI------DPGRNITALDVTRAARLSHTVRKTFVLAVK 177
Query: 201 NKN 203
+ N
Sbjct: 178 HMN 180
>gi|389848358|ref|YP_006350597.1| tRNA splicing endonuclease [Haloferax mediterranei ATCC 33500]
gi|448616980|ref|ZP_21665690.1| tRNA splicing endonuclease [Haloferax mediterranei ATCC 33500]
gi|388245664|gb|AFK20610.1| tRNA splicing endonuclease [Haloferax mediterranei ATCC 33500]
gi|445751635|gb|EMA03072.1| tRNA splicing endonuclease [Haloferax mediterranei ATCC 33500]
Length = 339
Score = 43.1 bits (100), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 61/154 (39%), Gaps = 17/154 (11%)
Query: 55 LLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAK 114
L FG+ + D QL + E YL L I D ++ D +
Sbjct: 189 LYQNGFFGQRLYGRNADSGPLQLSLLEAAYLARQ-DSLAIDETDVVSRGHD-------VE 240
Query: 115 KETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPS---LVHSEYAVLVLAEGEDGE 171
+ F Y+ LR+ V +SG ++G DF Y + L HSE+ V V+A
Sbjct: 241 GDRFDRRLAVYAMLRELQTVPKSGFKFGSDFRVYTDFETVSDLSHSEFLVRVVAPEH--- 297
Query: 172 NGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQ 205
V D+ VRL GGV K ++ + G+
Sbjct: 298 ---TFVPRDLSLDVRLAGGVRKRMVFALTSAKGE 328
>gi|315230684|ref|YP_004071120.1| tRNA-intron endonuclease [Thermococcus barophilus MP]
gi|315183712|gb|ADT83897.1| tRNA-intron endonuclease [Thermococcus barophilus MP]
Length = 171
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 106 ELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLA 165
EL+ + K E F L + Y LR + +VV++ +YG F YR HS++ V V++
Sbjct: 68 ELFDLGRKKDEQFDLKFLVYKDLRDRGYVVKTALKYGSHFRVYRKGME-EHSDWLVWVVS 126
Query: 166 EGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQ 205
E + +D+ VR+ GV K +++ ++++
Sbjct: 127 ENQK------MFPNDLTARVRVAHGVRKKMIMAVVDEDND 160
>gi|327311818|ref|YP_004338715.1| tRNA-splicing endonuclease subunit alpha [Thermoproteus uzoniensis
768-20]
gi|326948297|gb|AEA13403.1| tRNA-splicing endonuclease subunit alpha [Thermoproteus uzoniensis
768-20]
Length = 182
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 8/132 (6%)
Query: 77 LGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVR 136
L + E YL + L + +D + DEL + + + F +Y Y + R ++V+
Sbjct: 50 LSLYEALYLAE--RGLLEIYDDERRIDIDELRKIGEINLKNFNEIYLIYKYFRDLGYIVK 107
Query: 137 SGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLL 196
SG ++G F Y P + H+ V+V E + G + +DI RL V KT
Sbjct: 108 SGLKFGALFSVYEKGPGIDHAP-MVVVFLEPDRGISA-----TDIARGGRLSHSVKKTFT 161
Query: 197 ILTINKNGQGTA 208
+ T+ K A
Sbjct: 162 LATVLKPSNEVA 173
>gi|146304963|ref|YP_001192279.1| tRNA-splicing endonuclease subunit alpha [Metallosphaera sedula DSM
5348]
gi|145703213|gb|ABP96355.1| tRNA intron endonuclease [Metallosphaera sedula DSM 5348]
Length = 182
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 67 TAEKDKQWYQLGMEEGFYLC-HSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAY 125
+A+ + +L + EG YL + ++ +GE + L Y + F +Y Y
Sbjct: 40 SAKDINKPLELSLIEGLYLSEQGILEVRHLGE---VLDIARLENYATSVVAKFKPIYLVY 96
Query: 126 SHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGE 168
L+++ ++VRSG ++G DF Y P + H+ + V V+ E
Sbjct: 97 KDLKRRGFIVRSGIKFGSDFAIYTLGPGVEHAPFVVSVIDSSE 139
>gi|268572893|ref|XP_002641439.1| Hypothetical protein CBG13308 [Caenorhabditis briggsae]
Length = 849
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 104 DDELWQYMKA---KKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYA 160
D+E+W MK K E F + + L+ W+V SG +G F+ Y H HS
Sbjct: 138 DNEIWLKMKDYDDKPEDFGKCFAVFRFLKLNGWIVSSGLTFGCHFLIYCHGAQFYHSSAG 197
Query: 161 VLVLAE 166
VL+ E
Sbjct: 198 VLITNE 203
>gi|19173050|ref|NP_597601.1| tRNA-INTRON ENDONUCLEASE [Encephalitozoon cuniculi GB-M1]
gi|19168717|emb|CAD26236.1| tRNA-INTRON ENDONUCLEASE [Encephalitozoon cuniculi GB-M1]
gi|449329726|gb|AGE95996.1| tRNA-intron endonuclease [Encephalitozoon cuniculi]
Length = 108
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 128 LRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRL 187
+++ +VV G +YGVD + Y PS VHS Y +L+ R DI R
Sbjct: 15 FQERGFVVGDGLKYGVDLLLYTDCPSKVHSRYGILI---------DRRHTLLDIVGVQRT 65
Query: 188 CGGVAKTLLILTINKNGQGTATPSCLEQYAVEERTISRWSP 228
C V K L+++ + + +E +R+++ SP
Sbjct: 66 CASVNKALVVVFFDGLDVQMVSAERMELSGGGDRSLAARSP 106
>gi|358336462|dbj|GAA36928.2| tRNA-intron endonuclease [Clonorchis sinensis]
Length = 271
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 73/186 (39%), Gaps = 38/186 (20%)
Query: 81 EGFYLCHSLKCLKIVGEDNSTKNDDE-------LWQYM--------------KAKKETFP 119
E +L H L CL IV D+ D LW Y+ +A+ E
Sbjct: 90 EILFLFHGLGCLDIVLPDSEQSETDSDLTNPLRLWYYLCSVSRLPSPPVHPTQARTELPQ 149
Query: 120 LL---------YKAYSHLRKKNWVVRSGSQY-GVDFVAYRHHPSLVHSEYAVLVLAEGED 169
+ Y AY + R + WVVR G GV F+ Y P+ H+ + V+V D
Sbjct: 150 FIHLERDLLRRYAAYLYYRSRGWVVRPGLALGGVHFLLYAQGPAWRHAAFGVVVDRAEMD 209
Query: 170 GENGRLRVWSDIHCTVRLCGGVAKTLLI--LTINKNGQGTATP-SCLEQYAVEERTISRW 226
G+ + +H VR+ V K L++ +++ P + + V E + W
Sbjct: 210 GQQMTCAALA-VH--VRVVHSVGKRLILCRVSLPDVVNYKDCPWDAIREATVVETLVDHW 266
Query: 227 SPEQCR 232
+P CR
Sbjct: 267 NP-SCR 271
>gi|167043264|gb|ABZ07970.1| putative tRNA intron endonuclease, catalytic C-terminal domain
protein [uncultured marine crenarchaeote
HF4000_ANIW141M12]
Length = 178
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 6/123 (4%)
Query: 51 EQTELLNRACFGRHIVTAEKDKQWYQ----LGMEEGFYLCHSLKCLKIVGEDNSTKNDDE 106
E +L FG+ I + + L + EG YL + +KI ++ + D
Sbjct: 17 ESRDLFANGYFGKPIGIPKPNVNDINVPLILDLIEGCYL-QEISKIKIT-KNGKKVSLDT 74
Query: 107 LWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAE 166
L + + + F ++ Y R+K +V+ G ++G DF Y+ P + H+ Y V V +
Sbjct: 75 LIKICRKEYHNFDKKFQVYKDFREKGYVINPGIKFGCDFAVYQKGPGIDHAPYLVQVYNK 134
Query: 167 GED 169
+D
Sbjct: 135 NDD 137
>gi|303388703|ref|XP_003072585.1| tRNA-intron endonuclease [Encephalitozoon intestinalis ATCC 50506]
gi|303301726|gb|ADM11225.1| tRNA-intron endonuclease [Encephalitozoon intestinalis ATCC 50506]
Length = 107
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 15/90 (16%)
Query: 112 KAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGE 171
+ K+ET +++ ++ +VV G +YGVD + Y PS VHS+Y VL+
Sbjct: 5 REKRETLKRMFQ------EEGFVVGDGLKYGVDLLLYTDSPSKVHSKYGVLI-------- 50
Query: 172 NGRLRVWSDIHCTVRLCGGVAKTLLILTIN 201
R DI R C V K L+++ +
Sbjct: 51 -DRKHSLLDIVGVQRTCTSVNKILIVVFFD 79
>gi|345005995|ref|YP_004808848.1| tRNA-splicing endonuclease [halophilic archaeon DL31]
gi|344321621|gb|AEN06475.1| tRNA-splicing endonuclease [halophilic archaeon DL31]
Length = 342
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 63/158 (39%), Gaps = 25/158 (15%)
Query: 55 LLNRACFGRHIVTAEKDKQWYQLGMEEGFYL----CHSLKCLKIVGEDNSTKNDDELWQY 110
L FG+ + +K QL + E YL C +L+ + S +
Sbjct: 192 LYEDGFFGQRLAGRNAEKGPLQLSLLEAAYLADRSCLNLRAAAVRSHAESVEG------- 244
Query: 111 MKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHP---SLVHSEYAVLVLAEG 167
E F Y AY LR+ V +SG ++G DF Y +L HS+ V V
Sbjct: 245 -----ERFSRRYVAYESLREAGVVPKSGFKFGADFRVYEAFDGVENLGHSDKLVRVT--- 296
Query: 168 EDGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQ 205
E G + ++ VR+ GGV K ++ + +G+
Sbjct: 297 ---EPGHEFLPRELSLDVRMAGGVRKRMVFALTDPSGE 331
>gi|20093835|ref|NP_613682.1| tRNA splicing endonuclease [Methanopyrus kandleri AV19]
gi|54035946|sp|Q8TGZ5.1|ENDAL_METKA RecName: Full=EndA-like protein
gi|19886761|gb|AAM01612.1| tRNA splicing endonuclease [Methanopyrus kandleri AV19]
Length = 166
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 11/128 (8%)
Query: 76 QLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVV 135
QL EE +LC + V N + +EL + FP+ Y Y+ LR++ W
Sbjct: 37 QLWPEEALFLCEIGRLE--VRSGNVRISPEELMDRFVEEDPRFPVRYAVYADLRRRGWKP 94
Query: 136 RSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTL 195
+ G ++G +F A+R + AV VL E D + DI ++L G L
Sbjct: 95 KPGRKFGTEFRAFRGEDERI----AVKVLQEELDEFTAQ-----DILEWLKLVEGTEFEL 145
Query: 196 LILTINKN 203
++ ++ +
Sbjct: 146 VVAIVDND 153
>gi|383855044|ref|XP_003703029.1| PREDICTED: tRNA-splicing endonuclease subunit Sen34-like [Megachile
rotundata]
Length = 300
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 11/142 (7%)
Query: 47 AVEAEQTELLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDE 106
++ + E LN + + AE+ + +L E H++ + K+D E
Sbjct: 137 PLDPKVQETLNNIEINKQDLLAEEMARLPKLDKSEALIQTHTVYPW-------ANKDDIE 189
Query: 107 L--WQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVL 164
+ W+Y K+ L YK Y L +K + V +G ++G DF+ Y P + HS++ +L
Sbjct: 190 IVEWKYPSNYKQR--LRYKTYKDLWEKGYYVTNGEKFGGDFLVYPGDPIMFHSQFIILCK 247
Query: 165 AEGEDGENGRLRVWSDIHCTVR 186
+ ++ L C VR
Sbjct: 248 DKNDEIPITELSAQCRTACHVR 269
>gi|193084347|gb|ACF10004.1| tRNA-intron endonuclease [uncultured marine crenarchaeote
SAT1000-49-D2]
Length = 179
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%)
Query: 105 DELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVL 164
D L + + + F ++ Y R+K +V+ G ++G DF Y+ P + H+ Y V V
Sbjct: 73 DTLIKICRKEYHNFDKKFQVYKDFREKGYVINPGIKFGCDFAVYQKGPGIDHAPYLVQVY 132
Query: 165 AEGED 169
+ +D
Sbjct: 133 NKNDD 137
>gi|170291091|ref|YP_001737907.1| tRNA intron endonuclease [Candidatus Korarchaeum cryptofilum OPF8]
gi|170175171|gb|ACB08224.1| tRNA intron endonuclease [Candidatus Korarchaeum cryptofilum OPF8]
Length = 358
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 10/133 (7%)
Query: 33 SEAHAVLAGYSALLAVEAEQTELLNRACFGRHIVTAEKDK------QWYQLGMEEGFYLC 86
E VL G L+ + + L +R +G H + EK + Q QL + E YL
Sbjct: 180 PEKSGVLIGDRVLIF--EDPSGLYSRGFWG-HPIGIEKPEPFKDYEQPLQLPLIEALYLV 236
Query: 87 HSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFV 146
K LK+ + +EL ++ + + +S+ R ++ ++GS+YGVD++
Sbjct: 237 SRGK-LKVRDPKGNIIGLEELRNIFSGVRDNAEVKERVFSYWRDLGYIPKAGSKYGVDYM 295
Query: 147 AYRHHPSLVHSEY 159
Y P L H+ Y
Sbjct: 296 IYERGPGLEHAPY 308
>gi|340379900|ref|XP_003388463.1| PREDICTED: tRNA-splicing endonuclease subunit Sen34-like
[Amphimedon queenslandica]
Length = 227
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 15/115 (13%)
Query: 85 LCHSLKCLKIVGEDNS----TKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQ 140
+ HS C + N+ T D W + +E L ++ YS L +K + + SG +
Sbjct: 98 IVHSSDCTDAIDHVNTDTVNTDTDYVNWNWPSTDEEV--LRFRVYSDLWQKGYYITSGLK 155
Query: 141 YGVDFVAYRHHPSLVHSEYAVLVLAEGE---------DGENGRLRVWSDIHCTVR 186
YG +++ Y P++VHS + +L E DG G + I+CTV
Sbjct: 156 YGGEYLVYEGDPAIVHSHFIAKLLQWDEPISPLSLVQDGRLGGKVKKNTIYCTVN 210
>gi|307203727|gb|EFN82687.1| tRNA-splicing endonuclease subunit Sen34 [Harpegnathos saltator]
Length = 96
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%)
Query: 122 YKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDI 181
YK Y L ++ + + SG ++G DF+ Y P + HS++ V E E+ L I
Sbjct: 10 YKVYKDLHERGYYISSGDKFGGDFLVYPGDPIMFHSQFIVQCQCEKEEISVIELIAKCRI 69
Query: 182 HCTVR 186
C VR
Sbjct: 70 SCHVR 74
>gi|429217225|ref|YP_007175215.1| tRNA intron endonuclease [Caldisphaera lagunensis DSM 15908]
gi|429133754|gb|AFZ70766.1| tRNA intron endonuclease [Caldisphaera lagunensis DSM 15908]
Length = 181
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 122 YKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDI 181
Y+ Y LR VRSG +YG DFVAYR P + H+ + + E+ + L
Sbjct: 93 YEIYKELRDNGLKVRSGLKYGSDFVAYRLGPGIEHAPFIIHYYDINENFDPIELVRAG-- 150
Query: 182 HCTVRLCGGVAKTLLILTINKNGQ 205
RL V K +I ++ NG+
Sbjct: 151 ----RLSHSVKKDFIISSLKDNGK 170
>gi|448578676|ref|ZP_21644052.1| tRNA splicing endonuclease [Haloferax larsenii JCM 13917]
gi|445725259|gb|ELZ76883.1| tRNA splicing endonuclease [Haloferax larsenii JCM 13917]
Length = 339
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 71/179 (39%), Gaps = 19/179 (10%)
Query: 30 SIQSEAHAVLAGYSALLAVEAEQTELLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSL 89
+ ++ A L AL++ ++ L FG+ + D QL + E YL
Sbjct: 166 DLPADLDADLLSDRALVSTGVDR--LYQGGFFGQRLYGRNADSGPLQLSLLEAAYLARQ- 222
Query: 90 KCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYR 149
L I D+ + + + + + F Y+ LR+ V +SG ++G DF Y
Sbjct: 223 GALDI-------DADEVVERGREVEGDRFDRRLSVYTALREVGTVPKSGFKFGSDFRVYT 275
Query: 150 HHPS---LVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQ 205
+ L HSE+ V V+ V D+ VRL GGV K ++ G+
Sbjct: 276 DFETVDDLSHSEFLVRVVTPDH------TFVPRDLSLDVRLAGGVRKRMVFALTTAKGE 328
>gi|20092424|ref|NP_618499.1| tRNA splicing endonuclease [Methanosarcina acetivorans C2A]
gi|54035945|sp|Q8TGX1.1|ENDA_METAC RecName: Full=tRNA-splicing endonuclease; AltName: Full=tRNA-intron
endonuclease
gi|19917681|gb|AAM06979.1| tRNA intron endonuclease [Methanosarcina acetivorans C2A]
Length = 350
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 58/137 (42%), Gaps = 10/137 (7%)
Query: 71 DKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRK 130
D + QL + E YL S + + + + DE + + +F Y AY LR
Sbjct: 210 DPERLQLSLVESLYLF-SRGIIVVRDRKDRIFSFDEFVEKASEIESSFLRKYGAYKALRD 268
Query: 131 KNWVVRSGSQYGVDFVAYRHHPS---LVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRL 187
VV++G ++G F YR S + HSEY V V+ + RL V S VRL
Sbjct: 269 SGHVVKTGFKFGTHFRVYRKVESIEKIPHSEYLVNVIPSDYE---FRLPVMS---GAVRL 322
Query: 188 CGGVAKTLLILTINKNG 204
V K +L + G
Sbjct: 323 ANSVRKRMLFAVEKEEG 339
>gi|190345091|gb|EDK36912.2| hypothetical protein PGUG_01010 [Meyerozyma guilliermondii ATCC
6260]
Length = 232
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 9/73 (12%)
Query: 121 LYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSD 180
LYK YS LR + + V G ++G DFVAY P L HS L+++ ++ N D
Sbjct: 149 LYKVYSSLRSRGYWVSPGLRFGGDFVAYPGDPLLFHSH---LIVSHADEVTN------QD 199
Query: 181 IHCTVRLCGGVAK 193
+ RL GV K
Sbjct: 200 LVHRGRLATGVKK 212
>gi|269987054|gb|EEZ93328.1| tRNA-intron endonuclease [Candidatus Parvarchaeum acidiphilum
ARMAN-4]
Length = 177
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 74/163 (45%), Gaps = 11/163 (6%)
Query: 39 LAGYSALLAVEAEQTELLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGED 98
G +++ +A + L N+ FG + L +EE YL K LKI D
Sbjct: 11 FVGSKVIVSDQALASTLFNKGNFGTFVDGN------LVLSIEEAVYLNQK-KELKIYDTD 63
Query: 99 NSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSE 158
+EL K +++ F + Y YS L+ ++ ++ +YG DF Y + S+ E
Sbjct: 64 GKELKFNELINLAKKRQKRFWIRYLVYSDLKNNGYLPKTAFKYGGDFRVY-NKGSIPGKE 122
Query: 159 YAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTIN 201
+A +L ++ E+ L +S ++ R+ V K LL+ ++
Sbjct: 123 HAEWILYCSDEHESLPLLNFSAMN---RVAHSVRKKLLMGVVD 162
>gi|146423409|ref|XP_001487633.1| hypothetical protein PGUG_01010 [Meyerozyma guilliermondii ATCC
6260]
Length = 232
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 9/73 (12%)
Query: 121 LYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSD 180
LYK YS LR + + V G ++G DFVAY P L HS L+++ ++ N D
Sbjct: 149 LYKVYSSLRSRGYWVLPGLRFGGDFVAYPGDPLLFHSH---LIVSHADEVTN------QD 199
Query: 181 IHCTVRLCGGVAK 193
+ RL GV K
Sbjct: 200 LVHRGRLATGVKK 212
>gi|20093779|ref|NP_613626.1| tRNA splicing endonuclease [Methanopyrus kandleri AV19]
gi|54035947|sp|Q8TGZ7.1|ENDA_METKA RecName: Full=tRNA-splicing endonuclease; AltName: Full=tRNA-intron
endonuclease
gi|19886689|gb|AAM01556.1| tRNA splicing endonuclease [Methanopyrus kandleri AV19]
Length = 179
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 105 DELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVL 164
+EL + + ++ F Y Y L ++ +VV+SG +YG F Y P HS+Y V V+
Sbjct: 72 EELLSFFERRRPGFRAGYVVYRDLTERGYVVKSGFKYGGRFRVYEEDPDREHSKYVVRVV 131
>gi|254167344|ref|ZP_04874196.1| tRNA intron endonuclease, putative [Aciduliprofundum boonei T469]
gi|197623607|gb|EDY36170.1| tRNA intron endonuclease, putative [Aciduliprofundum boonei T469]
Length = 289
Score = 40.8 bits (94), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 121 LYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSD 180
+Y+ Y LR + +V+SG +YG F Y + HS+Y V +++E E+ +
Sbjct: 204 VYEIYKDLRDRGLIVKSGFKYGTHFRVYENSME-EHSKYLVHLISEREEIQK-------- 254
Query: 181 IHCTVRLCGGVAKTLLILTINKNGQ 205
I VR+ GV KTLL L N NG+
Sbjct: 255 ISRAVRVAHGVRKTLL-LAHNLNGK 278
>gi|303312737|ref|XP_003066380.1| tRNA-splicing endonuclease subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240106042|gb|EER24235.1| tRNA-splicing endonuclease subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
Length = 305
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 14/111 (12%)
Query: 119 PLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVW 178
P Y Y+HL K + + G ++G ++AY P HS + LV A D E +
Sbjct: 205 PSSYPLYAHLHSKGYFLSPGLRFGCQYMAYPGDPLRFHSHF--LVSASEWDEEINLM--- 259
Query: 179 SDIHCTVRLCGGVAKTLLILTINKNGQGTATPSCLEQYAVEERTISRWSPE 229
D+ RL GV K LI G PS ++ +ERT+ +S E
Sbjct: 260 -DLVVGGRLGTGVKKGYLI--------GGEIPSDEQEKGTDERTVRTFSLE 301
>gi|145348393|ref|XP_001418633.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578863|gb|ABO96926.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 177
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 98 DNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHS 157
D + +D W + ++E Y + L K++ + SG+++G DF+AY P L H+
Sbjct: 54 DGDGEEEDARWSFPSTREER--ERYAVFKDLHDKSFYMTSGAKFGSDFLAYPGDPILFHA 111
Query: 158 EYAVLVLA 165
Y V +++
Sbjct: 112 HYTVRIVS 119
>gi|156357327|ref|XP_001624172.1| predicted protein [Nematostella vectensis]
gi|156210931|gb|EDO32072.1| predicted protein [Nematostella vectensis]
Length = 102
Score = 40.4 bits (93), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 8/98 (8%)
Query: 108 WQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEG 167
W Y + E L Y + +L ++ + SG ++G DF+AY P HS Y V+V+
Sbjct: 1 WSYPNTENEH--LRYSIFKNLWERGLYITSGCKFGGDFLAYPGDPVKFHSFYIVVVVP-- 56
Query: 168 EDGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQ 205
D G L D+ RL V KT + +++ G
Sbjct: 57 YDKRTGML----DVVSMGRLGATVKKTAVFASMDSGGN 90
>gi|387133832|ref|YP_006299804.1| arginase family protein [Prevotella intermedia 17]
gi|386376680|gb|AFJ08000.1| arginase family protein [Prevotella intermedia 17]
Length = 397
Score = 40.4 bits (93), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 2/125 (1%)
Query: 22 NHLRFTFLSIQSEAHAVLAGYSALLAVEAEQTELLNRACFGRHIVTAEKDKQWYQLGMEE 81
N + F+ + +AHA + + E +L+N A +HI+ E + YQ+G+ E
Sbjct: 228 NEINTPFVILHFDAHADMKNGVVMKLHELSGYKLVNHANVIKHIIGFENVEHIYQIGIRE 287
Query: 82 GFYLCHSLKCLKIVGED-NSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQ 140
F L + K +I +D NS+KN D L + TF + + S + V+ +G
Sbjct: 288 PF-LYDNKKITRISVQDINSSKNTDILKEIETPVYITFDVDFFDPSLVPGTATVLPNGGD 346
Query: 141 YGVDF 145
Y F
Sbjct: 347 YNNTF 351
>gi|218883361|ref|YP_002427743.1| tRNA-splicing endonuclease [Desulfurococcus kamchatkensis 1221n]
gi|218764977|gb|ACL10376.1| tRNA-splicing endonuclease [Desulfurococcus kamchatkensis 1221n]
Length = 98
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%)
Query: 113 AKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGE 168
K F LY Y+ LR + R G ++G D++ YRH P + H+ + + V E
Sbjct: 2 GKIPRFEELYTVYNDLRSHGLIPRRGLKFGCDYLVYRHGPGIDHAPFGLQVFRTDE 57
>gi|402467504|gb|EJW02793.1| hypothetical protein EDEG_02809 [Edhazardia aedis USNM 41457]
Length = 104
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 123 KAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIH 182
K ++ +VV +G +YGVD + Y VHS+YAVL+ R + + +
Sbjct: 13 KIKEEFERQGFVVGNGLKYGVDLILYTDEKDKVHSKYAVLL---------NRGQSFHQLI 63
Query: 183 CTVRLCGGVAKTLLILTINKNG 204
R+C V K +++ +G
Sbjct: 64 SIQRICASVKKEFVLVDFRDDG 85
>gi|322787022|gb|EFZ13246.1| hypothetical protein SINV_09281 [Solenopsis invicta]
Length = 297
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 120 LLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWS 179
L YK Y L +K + + SG ++G DF+ Y P + HS+Y V + E+ +
Sbjct: 200 LKYKVYKDLWEKQYYITSGEKFGGDFLVYPGDPIMFHSQYIVQCKRKDEEMPITNIVNQC 259
Query: 180 DIHCTVR 186
+ C VR
Sbjct: 260 RLSCHVR 266
>gi|209882104|ref|XP_002142489.1| tRNA intron endonuclease, catalytic C-terminal domain-containing
protein [Cryptosporidium muris RN66]
gi|209558095|gb|EEA08140.1| tRNA intron endonuclease, catalytic C-terminal domain-containing
protein [Cryptosporidium muris RN66]
Length = 257
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 11/85 (12%)
Query: 128 LRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRL 187
R N+ V GS+YG DF Y P HS V V+ E + G + +W RL
Sbjct: 81 FRNHNYYVLEGSKYGCDFKIYDKDPDFNHSIALVHVVMEPFEVSVGDMILWQ------RL 134
Query: 188 CGGVAKTLLILTINKNGQGTATPSC 212
V K ++I ++K T SC
Sbjct: 135 AHSVNKKMMIAMVSK-----KTSSC 154
>gi|254166857|ref|ZP_04873711.1| tRNA intron endonuclease, putative [Aciduliprofundum boonei T469]
gi|289596249|ref|YP_003482945.1| tRNA intron endonuclease [Aciduliprofundum boonei T469]
gi|197624467|gb|EDY37028.1| tRNA intron endonuclease, putative [Aciduliprofundum boonei T469]
gi|289534036|gb|ADD08383.1| tRNA intron endonuclease [Aciduliprofundum boonei T469]
Length = 289
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 121 LYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSD 180
+Y Y LR + +V+SG +YG F Y + HS+Y V +++E E+ +
Sbjct: 204 VYDIYKDLRNRGLIVKSGFKYGTHFRVYENSME-EHSKYLVHLISEREEIQK-------- 254
Query: 181 IHCTVRLCGGVAKTLLILTINKNGQ 205
I VR+ GV KTLL L N NG+
Sbjct: 255 ISRAVRVAHGVRKTLL-LAHNLNGK 278
>gi|32564508|ref|NP_499543.2| Protein Y56A3A.11 [Caenorhabditis elegans]
gi|22859114|emb|CAB60523.3| Protein Y56A3A.11 [Caenorhabditis elegans]
Length = 278
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 90 KCLKIVGEDNSTKNDDELWQYMK---AKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFV 146
K + +V + +D+E+W M+ + F ++ + L+ W+V SG +G D++
Sbjct: 128 KIINVVKNGKISLSDEEIWTEMRNLYDNPKEFGKVFSVFRFLKMNGWIVTSGHTFGCDYL 187
Query: 147 AYRHHPSLVHSEYAVLV 163
Y HS VL+
Sbjct: 188 IYCLGAEFYHSSAGVLI 204
>gi|448320981|ref|ZP_21510464.1| tRNA splicing endonuclease [Natronococcus amylolyticus DSM 10524]
gi|445604874|gb|ELY58815.1| tRNA splicing endonuclease [Natronococcus amylolyticus DSM 10524]
Length = 345
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Query: 112 KAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPS---LVHSEYAVLVLAEGE 168
+ + E F + Y+ LR++ V ++G ++G DF Y S L HSE V V +
Sbjct: 245 EVEGERFDRRLRVYAELRERGLVPKTGYKFGADFRTYADVDSVDDLGHSELLVRVHPDDH 304
Query: 169 DGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNG 204
E DI VRL GV KT++ + +G
Sbjct: 305 VFEP------RDIALDVRLAHGVRKTMVFALVGDDG 334
>gi|432328384|ref|YP_007246528.1| tRNA intron endonuclease [Aciduliprofundum sp. MAR08-339]
gi|432135093|gb|AGB04362.1| tRNA intron endonuclease [Aciduliprofundum sp. MAR08-339]
Length = 289
Score = 40.0 bits (92), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 57/144 (39%), Gaps = 35/144 (24%)
Query: 54 ELLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKA 113
EL++ FGR + +W L + E YL C K
Sbjct: 163 ELIDSTTFGR------SEGEWGHLSVLEAMYLWEKGLCDK-------------------- 196
Query: 114 KKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENG 173
K + +Y+ Y LR+ +V+SG +YG F AY HS Y V V++ E+ +
Sbjct: 197 KPQVKTRIYRVYRDLRENGLIVKSGFKYGTHFRAYEKSME-EHSNYLVHVISRSEEIQK- 254
Query: 174 RLRVWSDIHCTVRLCGGVAKTLLI 197
I VR+ GV K LL+
Sbjct: 255 -------ISRAVRVAHGVRKILLL 271
>gi|448490683|ref|ZP_21608141.1| tRNA splicing endonuclease [Halorubrum californiensis DSM 19288]
gi|445693801|gb|ELZ45943.1| tRNA splicing endonuclease [Halorubrum californiensis DSM 19288]
Length = 394
Score = 40.0 bits (92), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 69/172 (40%), Gaps = 19/172 (11%)
Query: 53 TELLNRACFGRHIVTAEKDKQW-YQLGMEEGFYLCH----SLKCLKIVGEDNSTKNDDEL 107
+L R +GR + D + QL + E L SL VG+ + D
Sbjct: 202 ADLYERGFYGRPLTGRAADVEGALQLSLVEAASLAADGRLSLSASVGVGDVDGKTGDAAA 261
Query: 108 WQYMKAKK---ETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPS---LVHSEYAV 161
+ + E F Y HLR + V ++G ++G DF Y + L HSE+ V
Sbjct: 262 RVVARGRDVEGERFDRRLAVYKHLRAADAVPKTGFKFGADFRTYLDVETVEDLPHSEHLV 321
Query: 162 LVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLL--ILTINKNGQGTATPS 211
V+ G D E ++ VRL GGV K ++ + + + G PS
Sbjct: 322 RVV--GPDHEFS----PRELSLDVRLAGGVRKEMVFALTAVGEGHPGNDAPS 367
>gi|332025005|gb|EGI65192.1| tRNA-splicing endonuclease subunit Sen34 [Acromyrmex echinatior]
Length = 314
Score = 40.0 bits (92), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Query: 100 STKNDDEL--WQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHS 157
S K+D ++ W+Y + L YK Y L ++ + + SG ++G DF+ Y P + HS
Sbjct: 197 SNKDDVKIVEWKYPLTSDQQ--LKYKIYKDLWERQYYITSGEKFGGDFLVYPGDPIMFHS 254
Query: 158 EYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILT 199
+Y ++ + D E + D+ RL V KTL+ T
Sbjct: 255 QY--IIQCKRADEEIPIM----DVIAQCRLSCHVRKTLVFAT 290
>gi|313239607|emb|CBY14506.1| unnamed protein product [Oikopleura dioica]
Length = 161
Score = 39.7 bits (91), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 123 KAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVL 164
K + +L + + + SG +YG D++AY H P LVH++Y V VL
Sbjct: 94 KCHRYLWQCGYYLTSGMKYGCDWLAYEHPPDLVHAKYIVSVL 135
>gi|256076915|ref|XP_002574754.1| hypothetical protein [Schistosoma mansoni]
gi|353233663|emb|CCD81017.1| hypothetical protein Smp_033140 [Schistosoma mansoni]
Length = 286
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 5/112 (4%)
Query: 122 YKAYSHLRKKNWVVRSGSQY-GVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSD 180
Y Y + R + W+VRSG G D++ Y P+ H+ + VLV + + +L S
Sbjct: 174 YAVYIYYRSRGWIVRSGLCVGGADYLLYAEDPNRRHASFCVLVDRDSTAKDGEQLNC-SS 232
Query: 181 IHCTVRLCGGVAKTLLI--LTINKNGQGTATP-SCLEQYAVEERTISRWSPE 229
I VR+ + K L++ +++ + + P + + V+E I W P+
Sbjct: 233 IAAHVRVAHSIGKRLILCRVSLPSIEEFSNNPWEGVRKTTVKETLIDYWKPK 284
>gi|392863868|gb|EAS35361.2| tRNA-intron endonuclease [Coccidioides immitis RS]
Length = 302
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 48/111 (43%), Gaps = 14/111 (12%)
Query: 119 PLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVW 178
P Y Y+HL K + + G ++G ++AY P HS + LV A D E +
Sbjct: 202 PSSYPLYAHLHSKGYFLSPGLRFGCQYMAYPGDPLRFHSHF--LVSASEWDEEINLM--- 256
Query: 179 SDIHCTVRLCGGVAKTLLILTINKNGQGTATPSCLEQYAVEERTISRWSPE 229
D+ RL GV K LI G PS + +ERT+ +S E
Sbjct: 257 -DLVVGGRLGTGVKKGYLI--------GGEIPSDEQGKGTDERTVRTFSLE 298
>gi|161172160|pdb|2OHC|A Chain A, Structural And Mutational Analysis Of Trna-Intron Splicing
Endonuclease From Thermoplasma Acidophilum Dsm1728
gi|161172161|pdb|2OHC|B Chain B, Structural And Mutational Analysis Of Trna-Intron Splicing
Endonuclease From Thermoplasma Acidophilum Dsm1728
Length = 289
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 124 AYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHC 183
YS L + +V++G +YG +F Y S H+EY V V+ E E W I
Sbjct: 205 VYSDLVGRGCIVKTGFKYGANFRVYLGRDSQ-HAEYLVSVMPEEER--------WYSISR 255
Query: 184 TVRLCGGVAKTLLILTINKN 203
VR+ V KT++ +I KN
Sbjct: 256 GVRVASSVRKTMIYASIYKN 275
>gi|16082200|ref|NP_394647.1| tRNA splicing endonuclease [Thermoplasma acidophilum DSM 1728]
gi|54035955|sp|Q9HIY5.1|ENDA_THEAC RecName: Full=tRNA-splicing endonuclease; AltName: Full=tRNA-intron
endonuclease
gi|10640502|emb|CAC12316.1| tRNA intron endonuclease related protein [Thermoplasma acidophilum]
Length = 289
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 124 AYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHC 183
YS L + +V++G +YG +F Y S H+EY V V+ E E W I
Sbjct: 205 VYSDLVGRGCIVKTGFKYGANFRVYLGRDSQ-HAEYLVSVMPEEER--------WYSISR 255
Query: 184 TVRLCGGVAKTLLILTINKN 203
VR+ V KT++ +I KN
Sbjct: 256 GVRVASSVRKTMIYASIYKN 275
>gi|448330203|ref|ZP_21519489.1| tRNA splicing endonuclease [Natrinema versiforme JCM 10478]
gi|445612185|gb|ELY65917.1| tRNA splicing endonuclease [Natrinema versiforme JCM 10478]
Length = 356
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 17/156 (10%)
Query: 54 ELLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKA 113
EL R +G+ + E D+ Q + E YL + + E + +
Sbjct: 201 ELYERTFYGQPLEGREYDEPTLQCSLLEAAYLAER-GAIDLEPETVRERG-------REV 252
Query: 114 KKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPS---LVHSEYAVLVLAEGEDG 170
+ E F Y+ LR+++ V ++G ++G DF Y S L HSE V V
Sbjct: 253 EGERFDRRLLVYTALRERDVVPKTGYKFGADFRTYADVDSVEDLGHSELLVRVHPADYVF 312
Query: 171 ENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQG 206
E D+ VRL GV KT++ ++ + +G
Sbjct: 313 EP------RDLALDVRLAHGVRKTMVFALVDDDAEG 342
>gi|161172168|pdb|2OHE|A Chain A, Structural And Mutational Analysis Of Trna-Intron Splicing
Endonuclease From Thermoplasma Acidophilum Dsm 1728
Length = 290
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 124 AYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHC 183
YS L + +V++G +YG +F Y S H+EY V V+ E E W I
Sbjct: 206 VYSDLVGRGCIVKTGFKYGANFRVYLGRDSQ-HAEYLVSVMPEEER--------WYSISR 256
Query: 184 TVRLCGGVAKTLLILTINKN 203
VR+ V KT++ +I KN
Sbjct: 257 GVRVASSVRKTMIYASIYKN 276
>gi|448351343|ref|ZP_21540150.1| tRNA splicing endonuclease [Natrialba taiwanensis DSM 12281]
gi|445634297|gb|ELY87480.1| tRNA splicing endonuclease [Natrialba taiwanensis DSM 12281]
Length = 359
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 9/114 (7%)
Query: 112 KAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPS---LVHSEYAVLVLAEGE 168
+ + E F + Y+ LR++ V ++G ++G DF Y S L HSE V V
Sbjct: 251 EVEGERFDRRLRVYTELREREIVPKTGYKFGADFRTYAEVESVAELGHSELLVRVHPAEA 310
Query: 169 DGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGTATPSCLEQYAVEERT 222
E D+ VRL GV KT++ + + T + +E +++E T
Sbjct: 311 VFEP------RDLALDVRLAHGVRKTMVFALVERGDGATPAETDIEWWSIERLT 358
>gi|320032244|gb|EFW14199.1| tRNA-splicing endonuclease subunit sen34 [Coccidioides posadasii
str. Silveira]
Length = 305
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 48/111 (43%), Gaps = 14/111 (12%)
Query: 119 PLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVW 178
P Y Y+HL K + + G ++G ++AY P HS + LV A D E +
Sbjct: 205 PSSYPLYAHLHSKGYFLSPGLRFGCQYMAYPGDPLRFHSHF--LVSASEWDEEINLM--- 259
Query: 179 SDIHCTVRLCGGVAKTLLILTINKNGQGTATPSCLEQYAVEERTISRWSPE 229
D+ RL GV K LI G PS + +ERT+ +S E
Sbjct: 260 -DLVVGGRLGTGVKKGYLI--------GGEIPSDEQGKGTDERTVRTFSLE 301
>gi|307170883|gb|EFN62994.1| tRNA-splicing endonuclease subunit Sen34 [Camponotus floridanus]
Length = 305
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 122 YKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDI 181
YK Y L ++ + + SG ++G DF+ Y P + HS++ + + E+ L I
Sbjct: 210 YKVYKDLWERKYYITSGEKFGGDFLVYPGDPIMFHSQFIIQCKCKDEEMSITELVGQCRI 269
Query: 182 HCTVRLCGGVAKTLLILT 199
C VR KTL+ T
Sbjct: 270 SCHVR------KTLVFAT 281
>gi|448364296|ref|ZP_21552890.1| tRNA splicing endonuclease [Natrialba asiatica DSM 12278]
gi|445645184|gb|ELY98191.1| tRNA splicing endonuclease [Natrialba asiatica DSM 12278]
Length = 359
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 9/114 (7%)
Query: 112 KAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPS---LVHSEYAVLVLAEGE 168
+ + E F + Y+ LR++ V ++G ++G DF Y S L HSE V V
Sbjct: 251 EVEGERFDRRLRVYTELREREIVPKTGYKFGADFRTYAEVESVAELGHSELLVRVHPAEA 310
Query: 169 DGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGTATPSCLEQYAVEERT 222
E D+ VRL GV KT++ + + T + +E +++E T
Sbjct: 311 VFEP------RDLALDVRLAHGVRKTMVFALVERGDGATPAETDIEWWSIERLT 358
>gi|448298811|ref|ZP_21488832.1| tRNA splicing endonuclease [Natronorubrum tibetense GA33]
gi|445589846|gb|ELY44070.1| tRNA splicing endonuclease [Natronorubrum tibetense GA33]
Length = 354
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 64/150 (42%), Gaps = 11/150 (7%)
Query: 55 LLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAK 114
L +G+ + E D+ QL + E +L + D T D + + +
Sbjct: 204 LYETTFYGQPLEGREYDEPTLQLSLLEAAFLAER----GAIDLDPETVRD----RGHEVE 255
Query: 115 KETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGR 174
E F Y+ LR+++ V ++G ++G DF Y S+ + ++ L+L D
Sbjct: 256 GERFARRLAVYTELRERDVVPKTGYKFGADFRTYADVESVENLGHSELLLRVHPDDHVFE 315
Query: 175 LRVWSDIHCTVRLCGGVAKTLLILTINKNG 204
R D+ VRL GV KT++ + +G
Sbjct: 316 PR---DLALDVRLAHGVRKTMVFALVGADG 342
>gi|159469023|ref|XP_001692667.1| predicted protein [Chlamydomonas reinhardtii]
gi|158277920|gb|EDP03686.1| predicted protein [Chlamydomonas reinhardtii]
Length = 350
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 108 WQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEG 167
W+Y +E L ++ +S + ++ + + G ++G D +AY PSL H+++ V + E
Sbjct: 85 WRYPATAQEV--LRHRVFSDMHRQGFTLTGGIKFGADMMAYPGDPSLYHAQFTVRPVPEA 142
>gi|66822301|ref|XP_644505.1| hypothetical protein DDB_G0273777 [Dictyostelium discoideum AX4]
gi|66822781|ref|XP_644745.1| hypothetical protein DDB_G0273343 [Dictyostelium discoideum AX4]
gi|60472628|gb|EAL70579.1| hypothetical protein DDB_G0273777 [Dictyostelium discoideum AX4]
gi|60472940|gb|EAL70889.1| hypothetical protein DDB_G0273343 [Dictyostelium discoideum AX4]
Length = 385
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 120 LLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWS 179
L Y+ + L + + + GS++G F+AY+ P L H+ + V++ + ++
Sbjct: 293 LNYQIFKDLWSRGYYLSGGSKFGGTFLAYKGEPFLYHATFIVVIKRSNQTFQS------L 346
Query: 180 DIHCTVRLCGGVAKTLLILTINK 202
DI T RL V KT LI ++++
Sbjct: 347 DIITTARLAVHVNKTTLIASLDE 369
>gi|375082746|ref|ZP_09729793.1| tRNA-splicing endonuclease subunit alpha [Thermococcus litoralis
DSM 5473]
gi|374742594|gb|EHR78985.1| tRNA-splicing endonuclease subunit alpha [Thermococcus litoralis
DSM 5473]
Length = 170
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 106 ELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLA 165
EL++ + K E F L + Y LR + + V++ +YG F YR H+++ + V++
Sbjct: 67 ELFEIGRKKDEQFDLKFLVYRDLRNRGYTVKTALKYGSHFRVYRKGME-EHADWLIWVVS 125
Query: 166 EGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQ 205
E + +D+ VR+ GV K +++ ++++
Sbjct: 126 ENQKMYP------NDLTARVRVAHGVRKKMVLAVVDEDND 159
>gi|119192574|ref|XP_001246893.1| hypothetical protein CIMG_00664 [Coccidioides immitis RS]
Length = 320
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 48/111 (43%), Gaps = 14/111 (12%)
Query: 119 PLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVW 178
P Y Y+HL K + + G ++G ++AY P HS + LV A D E +
Sbjct: 220 PSSYPLYAHLHSKGYFLSPGLRFGCQYMAYPGDPLRFHSHF--LVSASEWDEEINLM--- 274
Query: 179 SDIHCTVRLCGGVAKTLLILTINKNGQGTATPSCLEQYAVEERTISRWSPE 229
D+ RL GV K LI G PS + +ERT+ +S E
Sbjct: 275 -DLVVGGRLGTGVKKGYLI--------GGEIPSDEQGKGTDERTVRTFSLE 316
>gi|405968684|gb|EKC33731.1| tRNA-splicing endonuclease subunit Sen34 [Crassostrea gigas]
Length = 301
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 108 WQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLA 165
W + ++K+E L Y Y L + + + +GS++G DF+ Y PS HS Y V+ +
Sbjct: 187 WSHPESKQEQ--LRYHVYRDLWNQGFFLSNGSKFGGDFLVYPGDPSRYHSHYIVICIP 242
>gi|433637175|ref|YP_007282935.1| tRNA intron endonuclease [Halovivax ruber XH-70]
gi|433288979|gb|AGB14802.1| tRNA intron endonuclease [Halovivax ruber XH-70]
Length = 377
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 13/109 (11%)
Query: 123 KAYSHLRKKNWVVRSGSQYGVDFVAYRHHPS---LVHSEYAVLVLAEGEDGENGRLRVWS 179
+ Y+ LR++ V ++G ++G DF Y + L HSE+ + V+ D E
Sbjct: 279 RVYTALRERGVVPKTGYKFGADFRTYATVDTVDDLGHSEHLIRVVPSTHDFEP------R 332
Query: 180 DIHCTVRLCGGVAKTLLILTINKNGQGTATPSCLEQYAVEERTISRWSP 228
D+ VRL GV KT+++ + P+ + R++ R +P
Sbjct: 333 DLSLDVRLAHGVRKTMVVALVTDEPAHPDDPA----EGISWRSVERLTP 377
>gi|242019734|ref|XP_002430314.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212515429|gb|EEB17576.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 260
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 122 YKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDI 181
Y Y +L +K + + G ++G DF+AY P H+ + V+ L E +L++ D+
Sbjct: 172 YLIYKNLWEKGFYITPGGKFGADFLAYPGDPVKFHAFFIVVCLKTRE-----KLQL-QDV 225
Query: 182 HCTVRLCGGVAKTLLILTINKNG 204
RL V KT+++ +N N
Sbjct: 226 ITYGRLGHSVKKTVVLAYLNDNN 248
>gi|448725653|ref|ZP_21708100.1| tRNA splicing endonuclease [Halococcus morrhuae DSM 1307]
gi|445797877|gb|EMA48315.1| tRNA splicing endonuclease [Halococcus morrhuae DSM 1307]
Length = 341
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 64/156 (41%), Gaps = 17/156 (10%)
Query: 54 ELLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKA 113
+L RA +G+ + + QL + E +L L + G + + +
Sbjct: 188 DLYERAFYGQRLAGRGAEGGPLQLSLVETAFLARE-GVLDLDGGAETV-----VERGRAV 241
Query: 114 KKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPS---LVHSEYAVLVL-AEGED 169
+ E F Y+ LR + V ++G ++G DF Y S L HSE+ V VL AE
Sbjct: 242 EGERFDRRLAVYATLRSEGLVPKTGFKFGADFRTYADVESVENLGHSEFLVRVLPAEYAF 301
Query: 170 GENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQ 205
G ++ VRL GGV K + + NG
Sbjct: 302 GPR-------ELSLDVRLAGGVHKRMAFALTDTNGD 330
>gi|448683122|ref|ZP_21692096.1| tRNA splicing endonuclease [Haloarcula japonica DSM 6131]
gi|445784107|gb|EMA34925.1| tRNA splicing endonuclease [Haloarcula japonica DSM 6131]
Length = 336
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 66/172 (38%), Gaps = 24/172 (13%)
Query: 54 ELLNRACFGRHIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKA 113
EL ++A +G+ + D+ QL + E YL G D + E+
Sbjct: 185 ELYDQAFYGQQL----GDEGAVQLSLVEAAYLTQEGLLTVDGGADAVVERGREV------ 234
Query: 114 KKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPS---LVHSEYAVLVLAEGEDG 170
+ + F Y+ LR ++G ++G DF Y S L HSE V VL
Sbjct: 235 EGDRFDRRLTVYAALRASGVAPKTGFKFGADFRTYADVESAENLGHSELLVRVLPHDHRF 294
Query: 171 ENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGTATPSCLEQYAVEERT 222
E D+ VRL GV KT++ G G +E AVE T
Sbjct: 295 EP------RDLALDVRLAHGVRKTMVFALTTDGGDGD-----IEWIAVERLT 335
>gi|448354304|ref|ZP_21543063.1| tRNA splicing endonuclease [Natrialba hulunbeirensis JCM 10989]
gi|445638185|gb|ELY91324.1| tRNA splicing endonuclease [Natrialba hulunbeirensis JCM 10989]
Length = 385
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 9/97 (9%)
Query: 112 KAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPS---LVHSEYAVLVLAEGE 168
+ + E F + Y+ LR++ V ++G ++G DF Y + S L HSE V V G
Sbjct: 255 EVEGERFDRRLRVYTELREREIVPKTGYKFGADFRTYANVESVSELSHSELLVRVHPAGY 314
Query: 169 DGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQ 205
E D+ VRL GV KT++ + ++ +
Sbjct: 315 IFEP------RDLALDVRLAHGVRKTMVFALVGESDE 345
>gi|260821442|ref|XP_002606042.1| hypothetical protein BRAFLDRAFT_239658 [Branchiostoma floridae]
gi|229291379|gb|EEN62052.1| hypothetical protein BRAFLDRAFT_239658 [Branchiostoma floridae]
Length = 300
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 108 WQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEG 167
W Y KET L + L +K + + SG ++G DF+ Y P HS Y +
Sbjct: 199 WNYPNTDKET--LRCNVFQDLWEKGYFLTSGGKFGGDFLVYPGDPFRYHSFYIAVCQQRT 256
Query: 168 EDGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQ 205
E E DI RL V KT+L+ + ++ G+
Sbjct: 257 EKMEA------LDIVRLGRLGSNVKKTVLLCSESETGE 288
>gi|321477677|gb|EFX88635.1| hypothetical protein DAPPUDRAFT_191173 [Daphnia pulex]
Length = 270
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 123 KAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIH 182
K +S L +K + + SG ++G DF+ Y P HS + + + E + L W I
Sbjct: 183 KVFSDLWEKGYYITSGEKFGGDFLVYPGDPLKFHSHFIAVCVEEHQ-----MLTPWFLIQ 237
Query: 183 CTVRLCGGVAKTLLILTINKNGQ 205
RL V KT+L+ ++++N +
Sbjct: 238 -KGRLGTSVKKTVLMCSLDENDE 259
>gi|198435386|ref|XP_002123488.1| PREDICTED: similar to tRNA-splicing endonuclease subunit sen34
[Ciona intestinalis]
Length = 307
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Query: 121 LYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSD 180
LY + L + + + G ++G +F+ Y P L HS Y +L + ++ +
Sbjct: 217 LYLIFCDLHNQGYFLTDGVKFGGNFLVYPGDPGLYHSTYILLHIPYEKEISATEFATFG- 275
Query: 181 IHCTVRLCGGVAKTLLILTINKNGQ 205
RL V KTLL+ +I+K +
Sbjct: 276 -----RLASSVKKTLLLASIDKENK 295
>gi|355571312|ref|ZP_09042564.1| tRNA intron endonuclease [Methanolinea tarda NOBI-1]
gi|354825700|gb|EHF09922.1| tRNA intron endonuclease [Methanolinea tarda NOBI-1]
Length = 333
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 46/113 (40%), Gaps = 9/113 (7%)
Query: 92 LKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHH 151
L + GE + + D + + FP + Y LRKK V R+G ++G F Y
Sbjct: 219 LVLTGE-GAGMDPDTFARTARESDVEFPEKMEVYEDLRKKGLVPRTGYKFGHHFRVYTGR 277
Query: 152 PSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNG 204
+HSE V L G S I +VRL V K +L I+ G
Sbjct: 278 K--IHSEMLVQALP------GGAALPMSSISRSVRLAHSVKKKMLFACIHNGG 322
>gi|348677310|gb|EGZ17127.1| hypothetical protein PHYSODRAFT_331137 [Phytophthora sojae]
Length = 240
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 127 HLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVR 186
L ++ +VV GS++G DF+ Y+ P H+ V+V +D E RV D+ R
Sbjct: 130 DLWERGYVVTFGSKFGADFLVYKDDPKKTHAVALVVV----KDYEEEFARV--DLVSFCR 183
Query: 187 LCGGVAKTLLILTINKNGQ 205
+ V K LL + NG+
Sbjct: 184 VAKMVKKKLLFACVRTNGE 202
>gi|449016481|dbj|BAM79883.1| probable tRNA splicing endonuclease subunit Sen34 [Cyanidioschyzon
merolae strain 10D]
Length = 435
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 122 YKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVL 164
+ + L ++ + + SG ++G DF+AY H P L H+ V+VL
Sbjct: 343 FLVFRDLWRRGFYLTSGHKFGADFLAYAHDPCLFHAGLCVIVL 385
>gi|448376356|ref|ZP_21559565.1| tRNA splicing endonuclease [Halovivax asiaticus JCM 14624]
gi|445657281|gb|ELZ10110.1| tRNA splicing endonuclease [Halovivax asiaticus JCM 14624]
Length = 377
Score = 37.7 bits (86), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 9/92 (9%)
Query: 123 KAYSHLRKKNWVVRSGSQYGVDFVAY---RHHPSLVHSEYAVLVLAEGEDGENGRLRVWS 179
+ Y+ LR++ V ++G ++G DF Y L HSE+ + V+ D E
Sbjct: 279 RVYTALRERGVVPKTGYKFGADFRTYVTVDTVDDLGHSEHLIRVVPSTHDFEP------R 332
Query: 180 DIHCTVRLCGGVAKTLLILTINKNGQGTATPS 211
D+ VRL GV KT+++ + P+
Sbjct: 333 DLSLDVRLAHGVRKTMVVALVTDEPAHPDDPA 364
>gi|254570008|ref|XP_002492114.1| hypothetical protein [Komagataella pastoris GS115]
gi|238031911|emb|CAY69834.1| hypothetical protein PAS_chr2-2_0460 [Komagataella pastoris GS115]
Length = 280
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 28/54 (51%)
Query: 122 YKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRL 175
Y +SHLRK + + +G ++G FVAY P HS V + GE E +L
Sbjct: 168 YLIFSHLRKNGYFITAGLRFGGKFVAYPGDPLRYHSHLIVKPVYNGEKIELKKL 221
>gi|50302909|ref|XP_451392.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640523|emb|CAH02980.1| KLLA0A08932p [Kluyveromyces lactis]
Length = 297
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 48/106 (45%), Gaps = 12/106 (11%)
Query: 114 KKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENG 173
+ E L YK Y LR+ + + G+++G +VAY P HS V A +D E
Sbjct: 199 QNEKLRLNYKVYKKLREMGYFMSPGARFGGRYVAYPGDPLRYHSHLTVQD-ARSKDEEID 257
Query: 174 RLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGTATPSCLEQYAVE 219
L + + RL V KT ++ IN+NG E Y+VE
Sbjct: 258 LLNMIN----GARLGTSVKKTWVLPGINENGDA-------EFYSVE 292
>gi|347533639|ref|YP_004840402.1| GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase
[Roseburia hominis A2-183]
gi|345503787|gb|AEN98470.1| GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase
[Roseburia hominis A2-183]
Length = 405
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 23/153 (15%)
Query: 91 CLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLR------KKNWVVRSGSQYGVD 144
C +++ ED + +LW+ K TF + +LR K+ V +QYG D
Sbjct: 165 CCEVMKEDGTMMRTSQLWEMAKEHNLTFITIRDLQDYLRIHEKHVKEEAVANLPTQYG-D 223
Query: 145 FVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWS-----DIHCTVRL-CGGVAKTLL-- 196
F Y + + + LV + DGE+ RV S D ++R CG +T +
Sbjct: 224 FKMYGYINDITGEHHLALVKGDLGDGEDVLCRVHSECLTGDAFGSLRCDCGLQLQTAMRQ 283
Query: 197 --------ILTINKNGQGTATPSCLEQYAVEER 221
IL + + G+G + ++ YA++E+
Sbjct: 284 VEAEGRGIILYMRQEGRGIGLINKIKAYALQEQ 316
>gi|328351398|emb|CCA37797.1| hypothetical protein PP7435_Chr2-0100 [Komagataella pastoris CBS
7435]
Length = 185
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 28/54 (51%)
Query: 122 YKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRL 175
Y +SHLRK + + +G ++G FVAY P HS V + GE E +L
Sbjct: 73 YLIFSHLRKNGYFITAGLRFGGKFVAYPGDPLRYHSHLIVKPVYNGEKIELKKL 126
>gi|409096236|ref|ZP_11216260.1| tRNA-splicing endonuclease subunit alpha [Thermococcus zilligii
AN1]
Length = 168
Score = 37.4 bits (85), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Query: 105 DELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVL 164
+E+ + + + E F Y Y LR + + V+SG ++G F YR HS + V V+
Sbjct: 64 EEVMKLGREEDELFDAKYLVYKDLRDRGYTVKSGLKFGSHFRVYRGGTE-EHSRWLVWVV 122
Query: 165 AEGEDGENGRLRVWSDIHCTVRLCGGVAKTLLILTINKNGQGT 207
E + +DI R+ GV K +++ ++ +G T
Sbjct: 123 PE------NKTIAPNDITARGRVAHGVRKEMIMAVVDDDGDVT 159
>gi|328772703|gb|EGF82741.1| hypothetical protein BATDEDRAFT_22850 [Batrachochytrium
dendrobatidis JAM81]
Length = 280
Score = 37.4 bits (85), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 99 NSTKNDDELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSE 158
N+ D L ++++++ + + L + W + SGS++G DF+ Y PSL H+
Sbjct: 172 NAVPVDPGLGMHLQSRQN---IRNTVFLFLWRAGWFISSGSKFGGDFLLYPRDPSLCHAM 228
Query: 159 YAVLVL 164
Y V ++
Sbjct: 229 YIVKIV 234
>gi|397628978|gb|EJK69142.1| hypothetical protein THAOC_09638 [Thalassiosira oceanica]
Length = 265
Score = 37.4 bits (85), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 53/139 (38%), Gaps = 27/139 (19%)
Query: 127 HLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWSDIHCTVR 186
H K + V SG Q+G + V Y P VHS++ V V + + W + VR
Sbjct: 126 HYEGKGYRVHSGLQFGCELVLYADSPDRVHSDFCVHVPPDRVGTMD-----WRTLQTLVR 180
Query: 187 LCGGVAKTLLIL---------------------TINKNGQGTATPSCLEQYAVEERTI-S 224
+ KTL++ I +G G T S +Y V+E + S
Sbjct: 181 SMPDLHKTLIVAHVRVEEMSAPAEGEKGGTNGQPIGPSGNGGNTASTSTRYCVDELCLTS 240
Query: 225 RWSPEQCREDPATVANGIK 243
+P + R P V +K
Sbjct: 241 EHAPFRQRNVPTEVGKQVK 259
>gi|242398092|ref|YP_002993516.1| tRNA-splicing endonuclease subunit alpha [Thermococcus sibiricus MM
739]
gi|242264485|gb|ACS89167.1| tRNA-splicing endonuclease subunit alpha [Thermococcus sibiricus MM
739]
Length = 175
Score = 37.0 bits (84), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 53/100 (53%), Gaps = 9/100 (9%)
Query: 105 DELWQYMKAKKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVL 164
+E+++ + K E F L + Y LR + + V++ +YG F YR H+++ + V+
Sbjct: 71 EEVFELGRKKDEQFDLKFLVYKDLRDRGYTVKTALKYGSHFRVYRKGME-DHADWLIWVV 129
Query: 165 AEGEDGENGRLRVW-SDIHCTVRLCGGVAKTLLILTINKN 203
E + R++ +++ VR+ GV K +++ ++++
Sbjct: 130 NESQ-------RMYPNELTARVRVAHGVRKKMVLAVVDED 162
>gi|195454789|ref|XP_002074405.1| GK10584 [Drosophila willistoni]
gi|194170490|gb|EDW85391.1| GK10584 [Drosophila willistoni]
Length = 257
Score = 37.0 bits (84), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 120 LLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWS 179
L Y+ + L +KN + SG +G DF+ Y P + H+ V+VL E+ +R
Sbjct: 167 LKYRIFCDLWQKNKFITSGESFGADFLVYSGDPLIYHASQIVIVL------EDSVIRPLE 220
Query: 180 DIHCTVRLCGGVAKTLLILTINKNG 204
I VRL V K+ + + NG
Sbjct: 221 FI-GKVRLSVIVNKSCIFAYEDNNG 244
>gi|237833017|ref|XP_002365806.1| tRNA intron endonuclease, catalytic C-terminal domain subfamily,
putative [Toxoplasma gondii ME49]
gi|211963470|gb|EEA98665.1| tRNA intron endonuclease, catalytic C-terminal domain subfamily,
putative [Toxoplasma gondii ME49]
Length = 454
Score = 37.0 bits (84), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 126 SHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLA 165
+ L K W V G ++GVDF+ Y H+++ VL+LA
Sbjct: 81 ARLAKAGWTVGCGVKFGVDFLLYSRAADYAHAQFGVLLLA 120
>gi|295108675|emb|CBL22628.1| GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase
[Ruminococcus obeum A2-162]
Length = 405
Score = 37.0 bits (84), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 23/153 (15%)
Query: 91 CLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLR------KKNWVVRSGSQYGVD 144
C +++ ED + +LW+ K TF + ++R K+ V +QYG D
Sbjct: 165 CCEVMKEDGTMMRTSQLWEMAKEHNLTFITIRDLQDYIRIHEKHVKEEAVANLPTQYG-D 223
Query: 145 FVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWS-----DIHCTVRL-CGGVAKTLL-- 196
F Y + + + LV + DGE+ RV S D ++R CG +T +
Sbjct: 224 FKMYGYINDITGEHHLALVKGDLGDGEDVLCRVHSECLTGDAFGSLRCDCGLQLQTAMRQ 283
Query: 197 --------ILTINKNGQGTATPSCLEQYAVEER 221
IL + + G+G + ++ YA++E+
Sbjct: 284 VEVEGRGIILYMRQEGRGIGLINKIKAYALQEQ 316
>gi|153811507|ref|ZP_01964175.1| hypothetical protein RUMOBE_01899 [Ruminococcus obeum ATCC 29174]
gi|153814756|ref|ZP_01967424.1| hypothetical protein RUMTOR_00971 [Ruminococcus torques ATCC 27756]
gi|317501332|ref|ZP_07959535.1| GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase
[Lachnospiraceae bacterium 8_1_57FAA]
gi|331088368|ref|ZP_08337287.1| riboflavin biosynthesis protein ribBA [Lachnospiraceae bacterium
3_1_46FAA]
gi|336440553|ref|ZP_08620139.1| riboflavin biosynthesis protein ribBA [Lachnospiraceae bacterium
1_1_57FAA]
gi|145847787|gb|EDK24705.1| 3,4-dihydroxy-2-butanone-4-phosphate synthase [Ruminococcus torques
ATCC 27756]
gi|149832248|gb|EDM87333.1| 3,4-dihydroxy-2-butanone-4-phosphate synthase [Ruminococcus obeum
ATCC 29174]
gi|316897296|gb|EFV19364.1| GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase
[Lachnospiraceae bacterium 8_1_57FAA]
gi|330408612|gb|EGG88078.1| riboflavin biosynthesis protein ribBA [Lachnospiraceae bacterium
3_1_46FAA]
gi|336012783|gb|EGN42678.1| riboflavin biosynthesis protein ribBA [Lachnospiraceae bacterium
1_1_57FAA]
Length = 405
Score = 37.0 bits (84), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 23/153 (15%)
Query: 91 CLKIVGEDNSTKNDDELWQYMKAKKETFPLLYKAYSHLR------KKNWVVRSGSQYGVD 144
C +++ ED + +LW+ K TF + ++R K+ V +QYG D
Sbjct: 165 CCEVMKEDGTMMRTSQLWEMAKEHNLTFITIRDLQDYIRIHEKHVKEEAVANLPTQYG-D 223
Query: 145 FVAYRHHPSLVHSEYAVLVLAEGEDGENGRLRVWS-----DIHCTVRL-CGGVAKTLL-- 196
F Y + + + LV + DGE+ RV S D ++R CG +T +
Sbjct: 224 FKMYGYINDITGEHHLALVKGDLGDGEDVLCRVHSECLTGDAFGSLRCDCGLQLQTAMRQ 283
Query: 197 --------ILTINKNGQGTATPSCLEQYAVEER 221
IL + + G+G + ++ YA++E+
Sbjct: 284 VEAEGRGIILYMRQEGRGIGLINKIKAYALQEQ 316
>gi|221488266|gb|EEE26480.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 454
Score = 36.6 bits (83), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 126 SHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLA 165
+ L K W V G ++GVDF+ Y H+++ VL+LA
Sbjct: 81 ARLAKAGWTVGCGVKFGVDFLLYSRAADYAHAQFGVLLLA 120
>gi|221508774|gb|EEE34343.1| troponin I, slow skeletal muscle, putative [Toxoplasma gondii VEG]
Length = 453
Score = 36.6 bits (83), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 126 SHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLA 165
+ L K W V G ++GVDF+ Y H+++ VL+LA
Sbjct: 80 ARLAKAGWTVGCGVKFGVDFLLYSRAADYAHAQFGVLLLA 119
>gi|308483988|ref|XP_003104195.1| hypothetical protein CRE_00989 [Caenorhabditis remanei]
gi|308258503|gb|EFP02456.1| hypothetical protein CRE_00989 [Caenorhabditis remanei]
Length = 284
Score = 36.6 bits (83), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 106 ELWQYMKA---KKETFPLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVL 162
E+W MK K F Y Y +L+ W V SG +G D++ Y HS VL
Sbjct: 150 EIWNKMKDYDNKSSHFGKYYSIYRYLKLNGWTVASGHTFGCDYLIYCLGAQFYHSSAGVL 209
Query: 163 V 163
+
Sbjct: 210 I 210
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.132 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,994,699,739
Number of Sequences: 23463169
Number of extensions: 161244110
Number of successful extensions: 310640
Number of sequences better than 100.0: 525
Number of HSP's better than 100.0 without gapping: 422
Number of HSP's successfully gapped in prelim test: 103
Number of HSP's that attempted gapping in prelim test: 309802
Number of HSP's gapped (non-prelim): 551
length of query: 243
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 105
effective length of database: 9,121,278,045
effective search space: 957734194725
effective search space used: 957734194725
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 75 (33.5 bits)