BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>043847
MAAKLVISLTLLSLFSLSYPLPDNSVSDAVEILSNSGYLSMALTLEFGSKFLTPPSPSLT
IFSPSDSAFASFGQPSLALLQLHFSPLSFPSTFMKTLPYHAKIPTMSPNHTLIVTSLPSD
DQVSLNGVKINQPEIYDDGSLRIFGIETFLDPDYSVSESQDGADPDLTLGQSVECLESVR
GSEMNFDDAVRYLTTEGYNVMASFLQLQLVGFKDQTVVLTVFAPPDEAFQGYFGNFSEYS
SIFLRHVVPCKISYQDLIDFDQGTVLPTFLEGFKINVTKSLKDLYLNNVRVNDPSLYLND
WMFIHGVEKIVPEYVPQSSQIGSSM

High Scoring Gene Products

Symbol, full name Information P value
FLA20
AT5G40940
protein from Arabidopsis thaliana 7.2e-43
AT1G15190 protein from Arabidopsis thaliana 4.6e-06
FLA21
AT5G06920
protein from Arabidopsis thaliana 1.9e-05

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  043847
        (325 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2167742 - symbol:FLA20 "AT5G40940" species:370...   259  7.2e-43   2
TAIR|locus:2037873 - symbol:AT1G15190 "AT1G15190" species...   129  4.6e-06   1
TAIR|locus:2169464 - symbol:FLA21 "AT5G06920" species:370...   127  1.9e-05   1


>TAIR|locus:2167742 [details] [associations]
            symbol:FLA20 "AT5G40940" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] Pfam:PF02469
            InterPro:IPR000782 GO:GO:0016021 EMBL:CP002688
            GenomeReviews:BA000015_GR Gene3D:2.30.180.10 SMART:SM00554
            SUPFAM:SSF82153 PROSITE:PS50213 EMBL:AB023040 IPI:IPI00530710
            RefSeq:NP_198910.1 UniGene:At.65613 ProteinModelPortal:Q9FGW0
            SMR:Q9FGW0 EnsemblPlants:AT5G40940.1 GeneID:834095
            KEGG:ath:AT5G40940 GeneFarm:3818 TAIR:At5g40940 eggNOG:NOG324992
            HOGENOM:HOG000090788 InParanoid:Q9FGW0 OMA:LEDWQEL PhylomeDB:Q9FGW0
            ProtClustDB:CLSN2916251 Genevestigator:Q9FGW0 GermOnline:AT5G40940
            Uniprot:Q9FGW0
        Length = 424

 Score = 259 (96.2 bits), Expect = 7.2e-43, Sum P(2) = 7.2e-43
 Identities = 59/148 (39%), Positives = 86/148 (58%)

Query:    25 SVSDAVEILSNSGYLSMALTLEFGSKFLTPPS-PSLTIFSPSDSAFASFGQPSLALLQLH 83
             SVS AVE+LS+SGYLSM LTL+  ++ L       LT+F+PSD +F+ FGQPSL  ++  
Sbjct:    68 SVSSAVEVLSDSGYLSMGLTLKLANQDLNLEDWQELTLFAPSDQSFSKFGQPSLLDMKYQ 127

Query:    84 FSPLSFPSTFMKTLPYHAKIPTMSPNHTLIVT-SLPSDDQVSLNGVKINQPEIYDDGSLR 142
              SP   P   ++ LP  AKIPT+  N++L VT S     + S+N V +    ++DDG + 
Sbjct:   128 LSPTRLPGETLRNLPNGAKIPTLRSNYSLTVTNSSRFGGKTSINNVVVQDSPVFDDGYVV 187

Query:   143 IFGIETFLDPDYSVSE--SQDGADPDLT 168
             I+G + F      +S+  S   + P  T
Sbjct:   188 IYGSDEFFTSPTKISDDSSSSSSIPSTT 215

 Score = 217 (81.4 bits), Expect = 7.2e-43, Sum P(2) = 7.2e-43
 Identities = 49/128 (38%), Positives = 76/128 (59%)

Query:   186 FDDAVRYLTTEGYNVMASFLQLQLV-GFKDQTVVLTVFAPPDEAFQGYFGNFSEYSSIFL 244
             F+ A R L + G+ ++A+FL LQL          +TVFAP DEA       FS+Y +IF 
Sbjct:   257 FESASRLLMSRGFVIIATFLALQLEDNTSGNDTKITVFAPIDEAIPNPTTKFSDYVTIFR 316

Query:   245 RHVVPCKISYQDLIDF-DQGTVLPTFLEGFKINVTKSLKDLYLNNVRVNDPSLYLNDWMF 303
              HVV   + ++DL  F  +G++L T L+G++I ++ S   L LN V +  P LY+NDW+ 
Sbjct:   317 GHVVSQLLLWKDLQKFAKEGSILQTVLKGYEIEISLSGDILLLNGVPLIYPDLYVNDWIA 376

Query:   304 IHGVEKIV 311
             +HG  +++
Sbjct:   377 VHGFNQMI 384

 Score = 113 (44.8 bits), Expect = 0.00098, P = 0.00098
 Identities = 40/158 (25%), Positives = 75/158 (47%)

Query:   176 LESVRGSEMNFDDAVRYLTTEGYNVMASFLQL--QLVGFKDQTVVLTVFAPPDEAFQGYF 233
             ++ V  S  +   AV  L+  GY  M   L+L  Q +  +D    LT+FAP D++F    
Sbjct:    59 IDLVATSMTSVSSAVEVLSDSGYLSMGLTLKLANQDLNLEDWQE-LTLFAPSDQSFS--- 114

Query:   234 GNFSEYSSIFLRHVV-PCKISYQDLIDFDQGTVLPTFLEGFKINVTKSLK---DLYLNNV 289
               F + S + +++ + P ++  + L +   G  +PT    + + VT S +      +NNV
Sbjct:   115 -KFGQPSLLDMKYQLSPTRLPGETLRNLPNGAKIPTLRSNYSLTVTNSSRFGGKTSINNV 173

Query:   290 RVNDPSLYLNDWMFIHGVEKIV--PEYVPQSSQIGSSM 325
              V D  ++ + ++ I+G ++    P  +   S   SS+
Sbjct:   174 VVQDSPVFDDGYVVIYGSDEFFTSPTKISDDSSSSSSI 211


>TAIR|locus:2037873 [details] [associations]
            symbol:AT1G15190 "AT1G15190" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND]
            InterPro:IPR000782 EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0005576 EMBL:AC007591 SMART:SM00554 SUPFAM:SSF82153
            PROSITE:PS50213 EMBL:AY924669 EMBL:AY800579 IPI:IPI00530315
            PIR:H86285 RefSeq:NP_172971.1 UniGene:At.20307 UniGene:At.51172
            UniGene:At.68762 ProteinModelPortal:Q5Q0H2
            EnsemblPlants:AT1G15190.1 GeneID:838085 KEGG:ath:AT1G15190
            GeneFarm:3817 TAIR:At1g15190 eggNOG:NOG278507 HOGENOM:HOG000214989
            InParanoid:Q5Q0H2 OMA:FANAIIT PhylomeDB:Q5Q0H2
            ProtClustDB:CLSN2914694 Genevestigator:Q5Q0H2 Uniprot:Q5Q0H2
        Length = 248

 Score = 129 (50.5 bits), Expect = 4.6e-06, P = 4.6e-06
 Identities = 31/99 (31%), Positives = 56/99 (56%)

Query:    58 SLTIFSPSDSAFASFGQP-SL----ALLQLHFSPLSFPSTFMKTLPYHAKIPTMSPNHTL 112
             SLT+F+P+DS         SL    + L+LH  PL    + +++LP  + +PT+ P+H L
Sbjct:    68 SLTLFAPTDSMLFDLDMTHSLPFYVSTLRLHSVPLRLSLSGLRSLPNSSSLPTLLPSHRL 127

Query:   113 IVTS-LPSDDQVSLNGVKINQPEIYDDGSLRIFGIETFL 150
             ++T    S+D + L+GV++  P ++D   + + G+   L
Sbjct:   128 LLTKHSSSNDSIFLDGVQLLIPGLFDGQHIAVHGLADLL 166


>TAIR|locus:2169464 [details] [associations]
            symbol:FLA21 "AT5G06920" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0006863 "purine nucleobase
            transport" evidence=RCA] Pfam:PF02469 InterPro:IPR000782
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005576 EMBL:AB010697
            Gene3D:2.30.180.10 SMART:SM00554 SUPFAM:SSF82153 PROSITE:PS50213
            UniGene:At.69266 IPI:IPI00545154 RefSeq:NP_196309.1
            UniGene:At.54756 ProteinModelPortal:Q9FL53 SMR:Q9FL53 PRIDE:Q9FL53
            EnsemblPlants:AT5G06920.1 GeneID:830583 KEGG:ath:AT5G06920
            GeneFarm:3820 TAIR:At5g06920 eggNOG:NOG308909 HOGENOM:HOG000091003
            InParanoid:Q9FL53 OMA:ICDANSS PhylomeDB:Q9FL53
            ProtClustDB:CLSN2916541 Genevestigator:Q9FL53 GermOnline:AT5G06920
            Uniprot:Q9FL53
        Length = 353

 Score = 127 (49.8 bits), Expect = 1.9e-05, P = 1.9e-05
 Identities = 39/128 (30%), Positives = 63/128 (49%)

Query:   188 DAVRYLTTEGYNVMASFLQLQLVGFKDQTVVLTVFAPPDEAFQGYFGNFSEYSSIFLR-- 245
             +A   L    +  +A+ L +    F   +   T+FA  D +F   F N S    +FL+  
Sbjct:    51 NASNTLRQSNFKAIATLLHISPEIFLSSSPNTTLFAIEDASF---F-NTSSLHPLFLKQL 106

Query:   246 ---HVVPCKISYQDLIDFDQGTVLPTFL--EGFKIN-VTKSLKDLYLNNVRVNDPSLYLN 299
                H +P  +S  DL+   QGT LPT L  +  +I+ V +  +   +N+VR+  P ++L 
Sbjct:   107 LHYHTLPLMLSMDDLLKKPQGTCLPTLLHHKSVQISTVNQESRTAEVNHVRITHPDMFLG 166

Query:   300 DWMFIHGV 307
             D + IHGV
Sbjct:   167 DSLVIHGV 174


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.135   0.392    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      325       308   0.00078  116 3  11 22  0.41    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  591 (63 KB)
  Total size of DFA:  193 KB (2110 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  25.32u 0.14s 25.46t   Elapsed:  00:00:01
  Total cpu time:  25.32u 0.14s 25.46t   Elapsed:  00:00:01
  Start:  Fri May 10 20:06:29 2013   End:  Fri May 10 20:06:30 2013

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