Query 043853
Match_columns 222
No_of_seqs 158 out of 2677
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 15:19:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043853.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043853hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jjq_A Uncharacterized RNA met 100.0 3.2E-33 1.1E-37 242.5 24.0 193 4-220 233-425 (425)
2 3bt7_A TRNA (uracil-5-)-methyl 100.0 1.1E-32 3.6E-37 235.7 23.1 194 15-222 160-369 (369)
3 1uwv_A 23S rRNA (uracil-5-)-me 100.0 6.3E-32 2.2E-36 235.4 23.8 194 17-222 239-432 (433)
4 3a27_A TYW2, uncharacterized p 99.9 3.1E-22 1.1E-26 164.1 17.8 195 7-220 64-270 (272)
5 3c0k_A UPF0064 protein YCCW; P 99.9 3.1E-20 1E-24 159.9 17.8 158 13-179 167-347 (396)
6 2frn_A Hypothetical protein PH 99.8 5.7E-20 2E-24 151.1 17.5 192 9-221 72-277 (278)
7 2b78_A Hypothetical protein SM 99.8 1.1E-20 3.8E-25 162.1 12.9 158 14-179 159-339 (385)
8 2yx1_A Hypothetical protein MJ 99.8 1.9E-19 6.3E-24 151.9 17.4 190 8-221 140-335 (336)
9 3k6r_A Putative transferase PH 99.8 2.6E-19 9E-24 146.7 16.3 148 9-171 72-225 (278)
10 2igt_A SAM dependent methyltra 99.8 1E-17 3.5E-22 140.9 21.0 152 18-171 100-272 (332)
11 1wxx_A TT1595, hypothetical pr 99.8 3.1E-19 1E-23 153.0 11.3 157 13-179 158-333 (382)
12 3p9n_A Possible methyltransfer 99.8 7E-18 2.4E-22 130.5 17.4 141 28-173 8-155 (189)
13 2as0_A Hypothetical protein PH 99.8 1.1E-18 3.6E-23 150.3 12.7 154 13-174 165-338 (396)
14 2yxd_A Probable cobalt-precorr 99.8 1.2E-17 4.2E-22 127.6 16.5 151 34-202 2-155 (183)
15 3lpm_A Putative methyltransfer 99.8 4E-17 1.4E-21 132.6 17.9 145 67-221 49-218 (259)
16 1nv8_A HEMK protein; class I a 99.8 2.5E-17 8.4E-22 135.8 16.2 138 28-175 88-253 (284)
17 3v97_A Ribosomal RNA large sub 99.8 2.1E-17 7.3E-22 151.3 17.0 176 25-220 501-701 (703)
18 2fpo_A Methylase YHHF; structu 99.8 1.6E-17 5.3E-22 130.2 13.8 139 29-175 20-164 (202)
19 1ws6_A Methyltransferase; stru 99.7 1.5E-17 5E-22 126.0 12.5 142 29-176 8-152 (171)
20 2ift_A Putative methylase HI07 99.7 1.9E-17 6.4E-22 129.7 12.9 140 29-175 19-167 (201)
21 2b3t_A Protein methyltransfera 99.7 7.2E-17 2.5E-21 132.2 14.9 146 28-183 75-250 (276)
22 1wy7_A Hypothetical protein PH 99.7 2.8E-16 9.7E-21 122.9 17.7 144 43-207 28-178 (207)
23 4dmg_A Putative uncharacterize 99.7 6.6E-17 2.2E-21 138.8 14.8 148 14-173 162-329 (393)
24 3dxy_A TRNA (guanine-N(7)-)-me 99.7 1.5E-17 5E-22 132.0 9.9 145 67-220 34-191 (218)
25 2nxc_A L11 mtase, ribosomal pr 99.7 4.6E-17 1.6E-21 132.0 12.8 157 29-203 85-243 (254)
26 2ipx_A RRNA 2'-O-methyltransfe 99.7 2.9E-16 1E-20 125.3 16.5 136 66-212 76-225 (233)
27 3evz_A Methyltransferase; NYSG 99.7 2.3E-16 8E-21 125.4 15.7 171 27-221 23-219 (230)
28 3njr_A Precorrin-6Y methylase; 99.7 3E-16 1E-20 123.1 15.3 133 55-204 45-180 (204)
29 3mti_A RRNA methylase; SAM-dep 99.7 7.1E-16 2.4E-20 118.5 16.5 133 66-205 21-170 (185)
30 1yzh_A TRNA (guanine-N(7)-)-me 99.7 2.4E-16 8.3E-21 124.2 13.5 128 67-203 41-181 (214)
31 3e05_A Precorrin-6Y C5,15-meth 99.7 8.9E-16 3E-20 120.0 16.5 119 55-180 30-151 (204)
32 3dmg_A Probable ribosomal RNA 99.7 6.1E-16 2.1E-20 132.3 16.2 166 32-203 197-372 (381)
33 1fbn_A MJ fibrillarin homologu 99.7 8.4E-16 2.9E-20 122.5 15.6 130 67-207 74-216 (230)
34 3grz_A L11 mtase, ribosomal pr 99.7 5.4E-16 1.9E-20 121.2 14.0 156 30-203 26-184 (205)
35 3axs_A Probable N(2),N(2)-dime 99.7 3.8E-16 1.3E-20 133.6 13.7 142 27-173 3-160 (392)
36 2ozv_A Hypothetical protein AT 99.7 1.9E-15 6.6E-20 122.8 16.5 145 67-220 36-210 (260)
37 2dul_A N(2),N(2)-dimethylguano 99.7 1.2E-15 4E-20 130.3 15.6 137 26-172 4-165 (378)
38 1dus_A MJ0882; hypothetical pr 99.7 2.2E-15 7.5E-20 115.8 15.0 143 25-178 13-164 (194)
39 2fhp_A Methylase, putative; al 99.7 1.8E-16 6.1E-21 121.8 8.3 142 28-173 9-156 (187)
40 4dzr_A Protein-(glutamine-N5) 99.7 1.6E-16 5.3E-21 124.4 7.6 108 36-147 2-111 (215)
41 3jwg_A HEN1, methyltransferase 99.7 9.1E-15 3.1E-19 115.2 17.4 162 48-222 12-210 (219)
42 1dl5_A Protein-L-isoaspartate 99.6 4.4E-16 1.5E-20 130.1 10.1 167 32-215 43-214 (317)
43 3lbf_A Protein-L-isoaspartate 99.6 1E-15 3.5E-20 120.0 11.4 140 57-213 69-208 (210)
44 2fca_A TRNA (guanine-N(7)-)-me 99.6 5.4E-15 1.8E-19 116.7 15.4 125 67-201 38-176 (213)
45 2h1r_A Dimethyladenosine trans 99.6 2.8E-15 9.4E-20 124.4 14.2 146 55-218 32-192 (299)
46 4dcm_A Ribosomal RNA large sub 99.6 5E-15 1.7E-19 126.4 16.2 163 31-203 191-367 (375)
47 3tm4_A TRNA (guanine N2-)-meth 99.6 1.4E-15 4.9E-20 129.8 12.7 125 49-180 202-339 (373)
48 3tma_A Methyltransferase; thum 99.6 1E-14 3.5E-19 123.6 17.8 119 49-173 187-319 (354)
49 2esr_A Methyltransferase; stru 99.6 7.9E-16 2.7E-20 117.5 9.7 122 50-175 15-142 (177)
50 1jg1_A PIMT;, protein-L-isoasp 99.6 1.4E-16 4.7E-21 127.5 5.7 144 55-213 81-225 (235)
51 4df3_A Fibrillarin-like rRNA/T 99.6 3.1E-15 1.1E-19 119.4 13.1 147 63-221 73-233 (233)
52 1ne2_A Hypothetical protein TA 99.6 7.5E-15 2.6E-19 114.3 14.5 127 41-184 28-159 (200)
53 2h00_A Methyltransferase 10 do 99.6 2.1E-15 7E-20 121.8 11.1 123 26-148 22-151 (254)
54 1l3i_A Precorrin-6Y methyltran 99.6 7.2E-15 2.5E-19 112.7 13.0 115 52-173 20-136 (192)
55 3ajd_A Putative methyltransfer 99.6 1.4E-14 4.8E-19 118.6 15.2 105 67-171 83-211 (274)
56 3hm2_A Precorrin-6Y C5,15-meth 99.6 4.8E-14 1.6E-18 107.2 16.6 114 52-173 12-129 (178)
57 1ixk_A Methyltransferase; open 99.6 2.4E-14 8.2E-19 119.5 16.1 79 67-149 118-199 (315)
58 3eey_A Putative rRNA methylase 99.6 1.1E-14 3.7E-19 113.0 12.6 132 67-205 22-174 (197)
59 3q87_B N6 adenine specific DNA 99.6 3.8E-14 1.3E-18 107.9 14.5 130 48-204 8-149 (170)
60 1jsx_A Glucose-inhibited divis 99.6 3.9E-14 1.3E-18 110.5 14.9 136 68-221 66-204 (207)
61 3dr5_A Putative O-methyltransf 99.6 1.8E-14 6.1E-19 114.4 13.1 119 49-171 40-163 (221)
62 3jwh_A HEN1; methyltransferase 99.6 9.8E-14 3.4E-18 109.2 17.2 159 49-220 13-208 (217)
63 3g89_A Ribosomal RNA small sub 99.6 6.7E-14 2.3E-18 113.1 16.6 145 66-221 79-228 (249)
64 3bzb_A Uncharacterized protein 99.6 2.8E-14 9.5E-19 117.2 14.5 155 49-213 63-250 (281)
65 3duw_A OMT, O-methyltransferas 99.6 1.9E-14 6.4E-19 113.8 13.0 103 68-171 59-167 (223)
66 1xdz_A Methyltransferase GIDB; 99.6 5.3E-14 1.8E-18 112.7 15.6 144 67-221 70-218 (240)
67 3m4x_A NOL1/NOP2/SUN family pr 99.6 4.3E-14 1.5E-18 123.1 15.6 126 66-201 104-260 (456)
68 3tfw_A Putative O-methyltransf 99.6 3.8E-14 1.3E-18 114.3 14.3 103 68-171 64-170 (248)
69 3kr9_A SAM-dependent methyltra 99.6 8.9E-14 3.1E-18 110.3 15.9 119 67-202 15-141 (225)
70 2f8l_A Hypothetical protein LM 99.6 3.7E-14 1.3E-18 119.7 14.3 164 40-221 106-304 (344)
71 2yxe_A Protein-L-isoaspartate 99.6 1.1E-14 3.9E-19 114.4 10.4 141 56-213 68-211 (215)
72 3mb5_A SAM-dependent methyltra 99.6 2.8E-14 9.5E-19 115.1 12.8 112 54-174 82-197 (255)
73 4gek_A TRNA (CMO5U34)-methyltr 99.6 1E-14 3.6E-19 118.6 10.3 112 54-171 57-178 (261)
74 1yb2_A Hypothetical protein TA 99.6 3.8E-14 1.3E-18 115.9 13.5 130 56-202 101-235 (275)
75 2pbf_A Protein-L-isoaspartate 99.6 2.1E-14 7.3E-19 113.8 11.4 163 30-211 48-226 (227)
76 3ntv_A MW1564 protein; rossman 99.6 2.5E-14 8.4E-19 114.2 11.8 98 68-169 72-174 (232)
77 3tr6_A O-methyltransferase; ce 99.6 2.4E-14 8.2E-19 113.3 11.3 104 68-171 65-174 (225)
78 3lec_A NADB-rossmann superfami 99.6 2.1E-13 7.1E-18 108.5 16.4 119 67-202 21-147 (230)
79 3u81_A Catechol O-methyltransf 99.6 6.2E-14 2.1E-18 110.9 13.1 105 68-172 59-171 (221)
80 3fpf_A Mtnas, putative unchara 99.5 1E-12 3.5E-17 108.1 20.6 105 59-172 116-223 (298)
81 1o9g_A RRNA methyltransferase; 99.5 2.4E-14 8.1E-19 115.4 10.0 125 47-173 33-216 (250)
82 3gdh_A Trimethylguanosine synt 99.5 1.2E-13 4E-18 110.5 13.5 103 37-149 52-156 (241)
83 4htf_A S-adenosylmethionine-de 99.5 3.4E-13 1.2E-17 110.5 16.5 102 67-171 68-173 (285)
84 2yxl_A PH0851 protein, 450AA l 99.5 5.7E-14 2E-18 122.6 12.5 147 67-221 259-448 (450)
85 3ldg_A Putative uncharacterize 99.5 4.7E-14 1.6E-18 120.6 11.4 124 49-180 178-352 (384)
86 2gb4_A Thiopurine S-methyltran 99.5 4.1E-13 1.4E-17 108.6 16.4 144 67-221 68-251 (252)
87 2yvl_A TRMI protein, hypotheti 99.5 3.2E-13 1.1E-17 108.1 15.5 111 67-183 91-202 (248)
88 3gnl_A Uncharacterized protein 99.5 2.8E-13 9.6E-18 108.6 14.9 117 67-200 21-145 (244)
89 3m6w_A RRNA methylase; rRNA me 99.5 1.2E-13 4.2E-18 120.4 13.8 114 67-184 101-245 (464)
90 1pjz_A Thiopurine S-methyltran 99.5 1.4E-13 4.7E-18 107.7 12.7 144 67-221 22-202 (203)
91 2ex4_A Adrenal gland protein A 99.5 1.8E-13 6.2E-18 109.4 13.7 141 67-218 79-239 (241)
92 3ldu_A Putative methylase; str 99.5 6.2E-14 2.1E-18 120.0 11.3 94 48-148 178-312 (385)
93 2pwy_A TRNA (adenine-N(1)-)-me 99.5 4.8E-13 1.6E-17 107.7 15.9 120 55-183 86-211 (258)
94 1vbf_A 231AA long hypothetical 99.5 8.9E-14 3E-18 110.4 11.4 140 54-211 59-198 (231)
95 3k0b_A Predicted N6-adenine-sp 99.5 4.4E-14 1.5E-18 121.2 10.2 125 48-180 184-359 (393)
96 1sui_A Caffeoyl-COA O-methyltr 99.5 2.7E-13 9.4E-18 109.3 14.2 103 68-171 80-190 (247)
97 1vl5_A Unknown conserved prote 99.5 8.1E-14 2.8E-18 112.7 11.0 111 54-171 26-140 (260)
98 3lcc_A Putative methyl chlorid 99.5 4E-13 1.4E-17 106.9 14.7 142 68-221 67-225 (235)
99 2avd_A Catechol-O-methyltransf 99.5 1.1E-13 3.7E-18 109.8 11.2 103 68-170 70-178 (229)
100 1o54_A SAM-dependent O-methylt 99.5 3.3E-13 1.1E-17 110.3 14.3 109 67-183 112-226 (277)
101 1r18_A Protein-L-isoaspartate( 99.5 6.9E-14 2.4E-18 111.0 9.9 131 67-209 84-227 (227)
102 1i1n_A Protein-L-isoaspartate 99.5 1.9E-13 6.5E-18 108.2 11.8 135 66-212 76-218 (226)
103 3dh0_A SAM dependent methyltra 99.5 3.9E-13 1.3E-17 105.7 13.4 101 67-171 37-143 (219)
104 1zq9_A Probable dimethyladenos 99.5 3.6E-13 1.2E-17 110.8 13.5 96 54-157 17-113 (285)
105 3f4k_A Putative methyltransfer 99.5 1E-12 3.5E-17 105.7 15.6 101 67-171 46-150 (257)
106 1y8c_A S-adenosylmethionine-de 99.5 7.9E-13 2.7E-17 105.3 14.7 113 53-171 23-142 (246)
107 3c3p_A Methyltransferase; NP_9 99.5 3.2E-13 1.1E-17 105.9 12.2 98 68-170 57-159 (210)
108 3kkz_A Uncharacterized protein 99.5 9.3E-13 3.2E-17 106.9 15.3 101 66-171 45-150 (267)
109 3hem_A Cyclopropane-fatty-acyl 99.5 9.1E-13 3.1E-17 108.9 15.4 108 55-171 62-183 (302)
110 3ckk_A TRNA (guanine-N(7)-)-me 99.5 3.7E-13 1.2E-17 107.8 12.4 111 67-179 46-176 (235)
111 1nkv_A Hypothetical protein YJ 99.5 3.5E-13 1.2E-17 108.4 12.2 113 52-171 23-140 (256)
112 1g8a_A Fibrillarin-like PRE-rR 99.5 2.4E-12 8.1E-17 102.0 16.9 103 66-171 72-178 (227)
113 2vdv_E TRNA (guanine-N(7)-)-me 99.5 4.2E-13 1.4E-17 107.9 12.6 114 67-181 49-183 (246)
114 3c3y_A Pfomt, O-methyltransfer 99.5 3.1E-13 1E-17 108.3 11.6 103 68-171 71-181 (237)
115 3r3h_A O-methyltransferase, SA 99.5 3.6E-14 1.2E-18 114.1 6.0 103 68-170 61-169 (242)
116 3cbg_A O-methyltransferase; cy 99.5 2.5E-13 8.6E-18 108.4 10.8 103 68-171 73-182 (232)
117 3htx_A HEN1; HEN1, small RNA m 99.5 1.9E-12 6.6E-17 118.3 17.7 160 48-221 704-916 (950)
118 2xvm_A Tellurite resistance pr 99.5 5.3E-13 1.8E-17 103.1 12.2 99 68-171 33-136 (199)
119 2gpy_A O-methyltransferase; st 99.5 2.4E-13 8.2E-18 108.2 10.4 101 68-170 55-159 (233)
120 3vc1_A Geranyl diphosphate 2-C 99.5 1.4E-12 4.7E-17 108.4 15.4 100 67-171 117-221 (312)
121 3iv6_A Putative Zn-dependent a 99.5 2.3E-13 7.9E-18 110.5 10.3 123 54-184 34-161 (261)
122 1ve3_A Hypothetical protein PH 99.5 7E-13 2.4E-17 104.6 12.8 99 68-171 39-142 (227)
123 3ofk_A Nodulation protein S; N 99.5 2.1E-13 7.3E-18 107.0 9.8 114 49-171 35-154 (216)
124 1xxl_A YCGJ protein; structura 99.5 7E-13 2.4E-17 106.0 13.0 100 67-171 21-124 (239)
125 3id6_C Fibrillarin-like rRNA/T 99.5 2.9E-12 1E-16 102.2 16.3 142 64-218 73-229 (232)
126 3uwp_A Histone-lysine N-methyl 99.5 5.7E-13 1.9E-17 113.8 12.9 114 54-171 162-288 (438)
127 2okc_A Type I restriction enzy 99.5 6.3E-13 2.2E-17 115.9 13.4 144 67-222 171-357 (445)
128 3h2b_A SAM-dependent methyltra 99.5 6.1E-13 2.1E-17 103.4 11.8 123 68-206 42-184 (203)
129 2hnk_A SAM-dependent O-methylt 99.5 3.2E-13 1.1E-17 108.0 10.4 103 68-171 61-181 (239)
130 4hc4_A Protein arginine N-meth 99.5 2.7E-13 9.3E-18 115.4 10.5 95 68-168 84-186 (376)
131 3m70_A Tellurite resistance pr 99.5 5.3E-13 1.8E-17 109.4 11.9 99 67-171 120-223 (286)
132 3mgg_A Methyltransferase; NYSG 99.4 1.3E-12 4.4E-17 106.3 13.7 100 67-171 37-142 (276)
133 3r0q_C Probable protein argini 99.4 5.9E-13 2E-17 113.7 12.0 113 51-171 49-169 (376)
134 2qm3_A Predicted methyltransfe 99.4 3.3E-12 1.1E-16 108.9 16.6 103 67-173 172-280 (373)
135 1xtp_A LMAJ004091AAA; SGPP, st 99.4 1.6E-12 5.6E-17 104.3 13.8 133 67-212 93-246 (254)
136 3ll7_A Putative methyltransfer 99.4 2.5E-13 8.5E-18 116.6 9.4 80 68-149 94-175 (410)
137 1i9g_A Hypothetical protein RV 99.4 9.5E-13 3.3E-17 107.4 12.4 111 54-173 88-205 (280)
138 2r6z_A UPF0341 protein in RSP 99.4 9.5E-14 3.2E-18 112.7 6.3 82 67-148 83-172 (258)
139 2p7i_A Hypothetical protein; p 99.4 1.5E-12 5.3E-17 103.7 13.3 96 67-171 42-141 (250)
140 3g2m_A PCZA361.24; SAM-depende 99.4 1.8E-12 6.2E-17 106.9 14.1 99 68-171 83-190 (299)
141 3bus_A REBM, methyltransferase 99.4 2.2E-12 7.5E-17 104.8 14.2 117 49-171 45-166 (273)
142 3sm3_A SAM-dependent methyltra 99.4 2.8E-12 9.7E-17 101.4 14.5 101 67-171 30-141 (235)
143 2pjd_A Ribosomal RNA small sub 99.4 1.4E-12 4.6E-17 110.0 13.4 130 32-173 166-305 (343)
144 1nt2_A Fibrillarin-like PRE-rR 99.4 1.5E-12 5.1E-17 102.4 12.6 103 66-171 56-161 (210)
145 2frx_A Hypothetical protein YE 99.4 8.8E-13 3E-17 115.8 12.4 80 67-149 117-199 (479)
146 3gru_A Dimethyladenosine trans 99.4 5.2E-13 1.8E-17 110.2 10.1 99 53-159 38-136 (295)
147 3dlc_A Putative S-adenosyl-L-m 99.4 1E-12 3.6E-17 102.7 11.4 114 51-171 30-148 (219)
148 2fyt_A Protein arginine N-meth 99.4 1.8E-12 6.3E-17 109.2 12.9 109 53-168 52-168 (340)
149 3cgg_A SAM-dependent methyltra 99.4 4.1E-12 1.4E-16 97.4 13.8 129 67-211 46-183 (195)
150 3e8s_A Putative SAM dependent 99.4 5.2E-12 1.8E-16 99.2 14.6 98 68-171 53-152 (227)
151 2fk8_A Methoxy mycolic acid sy 99.4 3.8E-12 1.3E-16 105.8 14.4 99 66-171 89-194 (318)
152 3q7e_A Protein arginine N-meth 99.4 1.1E-12 3.8E-17 110.9 11.3 98 67-169 66-171 (349)
153 1kpg_A CFA synthase;, cyclopro 99.4 6.4E-12 2.2E-16 102.8 15.5 97 67-171 64-168 (287)
154 1sqg_A SUN protein, FMU protei 99.4 2.8E-12 9.5E-17 111.3 13.9 81 66-149 245-327 (429)
155 2ih2_A Modification methylase 99.4 1.4E-12 4.7E-17 112.5 11.8 153 40-222 19-211 (421)
156 2o57_A Putative sarcosine dime 99.4 3.7E-12 1.3E-16 104.8 13.8 115 50-171 63-187 (297)
157 3g5l_A Putative S-adenosylmeth 99.4 3.6E-12 1.2E-16 102.4 13.4 98 67-171 44-145 (253)
158 2ar0_A M.ecoki, type I restric 99.4 4E-12 1.4E-16 113.3 14.6 165 39-221 148-361 (541)
159 3orh_A Guanidinoacetate N-meth 99.4 6.3E-13 2.2E-17 106.4 8.6 101 67-170 60-169 (236)
160 2b9e_A NOL1/NOP2/SUN domain fa 99.4 7.7E-12 2.6E-16 104.0 15.4 82 66-148 101-185 (309)
161 1xj5_A Spermidine synthase 1; 99.4 6.7E-12 2.3E-16 105.4 15.0 103 67-171 120-235 (334)
162 3dtn_A Putative methyltransfer 99.4 1.5E-12 5.1E-17 103.4 10.5 110 54-171 32-148 (234)
163 3tqs_A Ribosomal RNA small sub 99.4 1.4E-12 4.7E-17 105.7 10.4 90 54-148 18-107 (255)
164 1wzn_A SAM-dependent methyltra 99.4 3.9E-12 1.3E-16 102.1 12.7 99 67-171 41-145 (252)
165 2kw5_A SLR1183 protein; struct 99.4 4.7E-12 1.6E-16 98.3 12.7 98 68-171 31-131 (202)
166 3m33_A Uncharacterized protein 99.4 2.7E-12 9.1E-17 101.8 11.4 117 67-202 48-165 (226)
167 4hg2_A Methyltransferase type 99.4 8.5E-13 2.9E-17 107.0 8.7 105 52-171 28-135 (257)
168 3v97_A Ribosomal RNA large sub 99.4 3E-12 1E-16 117.3 12.8 127 48-178 173-354 (703)
169 1g6q_1 HnRNP arginine N-methyl 99.4 3.7E-12 1.3E-16 106.8 12.4 110 52-168 25-142 (328)
170 3lkd_A Type I restriction-modi 99.4 3.2E-11 1.1E-15 107.3 19.0 173 39-222 196-408 (542)
171 3e23_A Uncharacterized protein 99.4 6.2E-12 2.1E-16 98.3 12.8 95 67-172 43-142 (211)
172 2y1w_A Histone-arginine methyl 99.4 2.7E-12 9.3E-17 108.4 11.5 111 53-171 38-155 (348)
173 2yqz_A Hypothetical protein TT 99.4 4.6E-12 1.6E-16 102.0 12.1 100 67-171 39-141 (263)
174 3thr_A Glycine N-methyltransfe 99.4 5.3E-12 1.8E-16 103.6 12.6 117 53-172 45-176 (293)
175 1zx0_A Guanidinoacetate N-meth 99.4 1.5E-12 5E-17 103.9 8.9 101 67-170 60-169 (236)
176 3l8d_A Methyltransferase; stru 99.4 9.3E-12 3.2E-16 99.1 13.5 108 53-171 43-153 (242)
177 3hnr_A Probable methyltransfer 99.4 2.9E-12 9.8E-17 100.7 10.3 96 67-171 45-145 (220)
178 3dli_A Methyltransferase; PSI- 99.4 6.3E-12 2.2E-16 100.3 12.3 128 67-211 41-191 (240)
179 1u2z_A Histone-lysine N-methyl 99.4 3.9E-12 1.3E-16 110.0 11.5 113 57-171 234-359 (433)
180 3mq2_A 16S rRNA methyltransfer 99.4 8.7E-13 3E-17 103.8 6.8 100 67-171 27-140 (218)
181 3d2l_A SAM-dependent methyltra 99.4 4E-12 1.4E-16 101.2 10.6 108 53-171 23-137 (243)
182 3ujc_A Phosphoethanolamine N-m 99.4 2.6E-12 8.9E-17 103.6 9.6 99 67-171 55-159 (266)
183 2b25_A Hypothetical protein; s 99.4 4.5E-12 1.5E-16 106.4 11.4 110 57-173 97-221 (336)
184 1inl_A Spermidine synthase; be 99.4 4.7E-12 1.6E-16 104.7 11.3 103 67-172 90-206 (296)
185 3gu3_A Methyltransferase; alph 99.4 6.2E-12 2.1E-16 103.1 11.9 98 67-171 22-126 (284)
186 3b3j_A Histone-arginine methyl 99.4 2E-12 6.7E-17 113.7 9.4 114 50-171 143-263 (480)
187 2pxx_A Uncharacterized protein 99.4 3.9E-12 1.3E-16 99.2 10.1 101 67-173 42-161 (215)
188 3adn_A Spermidine synthase; am 99.3 2.2E-12 7.5E-17 106.6 8.8 102 67-171 83-198 (294)
189 2o07_A Spermidine synthase; st 99.3 9.9E-12 3.4E-16 103.1 12.4 102 67-171 95-209 (304)
190 3g5t_A Trans-aconitate 3-methy 99.3 1E-11 3.5E-16 102.4 12.1 114 52-169 24-147 (299)
191 1mjf_A Spermidine synthase; sp 99.3 8.5E-12 2.9E-16 102.4 11.2 100 67-171 75-193 (281)
192 3fut_A Dimethyladenosine trans 99.3 7.5E-12 2.5E-16 102.1 10.5 98 54-160 36-133 (271)
193 1qam_A ERMC' methyltransferase 99.3 4.5E-11 1.5E-15 96.1 14.9 97 53-158 18-114 (244)
194 1iy9_A Spermidine synthase; ro 99.3 1.1E-11 3.7E-16 101.5 11.4 103 67-172 75-190 (275)
195 3ocj_A Putative exported prote 99.3 2.7E-12 9.2E-17 106.3 7.9 101 66-171 117-227 (305)
196 3bkx_A SAM-dependent methyltra 99.3 1.8E-11 6E-16 99.5 12.6 112 56-171 34-159 (275)
197 3p2e_A 16S rRNA methylase; met 99.3 8.4E-13 2.9E-17 105.0 4.5 100 67-169 24-137 (225)
198 2pt6_A Spermidine synthase; tr 99.3 2.7E-11 9.3E-16 101.2 13.8 102 67-171 116-230 (321)
199 3pfg_A N-methyltransferase; N, 99.3 4.5E-12 1.5E-16 102.5 8.8 95 67-171 50-151 (263)
200 3fzg_A 16S rRNA methylase; met 99.3 8.4E-12 2.9E-16 96.0 9.2 103 52-168 38-149 (200)
201 2p8j_A S-adenosylmethionine-de 99.3 1.4E-11 4.7E-16 95.9 10.6 100 67-171 23-128 (209)
202 3g07_A 7SK snRNA methylphospha 99.3 2.1E-12 7.1E-17 106.5 6.2 106 67-172 46-221 (292)
203 2a14_A Indolethylamine N-methy 99.3 7.8E-12 2.7E-16 101.5 9.4 115 57-171 45-197 (263)
204 1uir_A Polyamine aminopropyltr 99.3 1.2E-11 4E-16 103.1 10.6 102 67-171 77-195 (314)
205 3ou2_A SAM-dependent methyltra 99.3 1.7E-11 5.7E-16 95.9 10.7 96 67-171 46-146 (218)
206 3ggd_A SAM-dependent methyltra 99.3 1.8E-11 6.1E-16 97.9 11.1 102 67-171 56-163 (245)
207 3bwc_A Spermidine synthase; SA 99.3 2.9E-11 9.9E-16 100.3 12.6 104 67-172 95-211 (304)
208 3bkw_A MLL3908 protein, S-aden 99.3 1.5E-11 5.1E-16 97.9 10.3 98 67-171 43-144 (243)
209 2i62_A Nicotinamide N-methyltr 99.3 3.8E-11 1.3E-15 96.7 12.5 106 66-171 55-198 (265)
210 1m6y_A S-adenosyl-methyltransf 99.3 7.8E-12 2.7E-16 103.5 8.4 81 67-148 26-109 (301)
211 3ege_A Putative methyltransfer 99.3 1.2E-11 3.9E-16 100.2 9.2 106 53-172 22-132 (261)
212 3bgv_A MRNA CAP guanine-N7 met 99.3 3E-11 1E-15 100.3 11.9 107 67-173 34-157 (313)
213 3i9f_A Putative type 11 methyl 99.3 3E-11 1E-15 91.1 10.7 93 67-171 17-112 (170)
214 1ri5_A MRNA capping enzyme; me 99.3 1.2E-11 4E-16 101.4 9.1 102 67-171 64-174 (298)
215 4fsd_A Arsenic methyltransfera 99.3 2.5E-11 8.6E-16 103.7 11.4 104 67-171 83-203 (383)
216 2oyr_A UPF0341 protein YHIQ; a 99.3 9.9E-12 3.4E-16 100.6 8.3 91 55-148 76-175 (258)
217 3ccf_A Cyclopropane-fatty-acyl 99.3 1.7E-11 5.9E-16 100.0 9.7 95 67-171 57-154 (279)
218 2vdw_A Vaccinia virus capping 99.3 2.4E-11 8.1E-16 100.8 10.6 103 67-172 48-170 (302)
219 2i7c_A Spermidine synthase; tr 99.3 4.1E-11 1.4E-15 98.4 11.8 103 67-172 78-193 (283)
220 3khk_A Type I restriction-modi 99.3 4.6E-11 1.6E-15 106.4 13.1 164 40-222 225-446 (544)
221 3gjy_A Spermidine synthase; AP 99.3 1.9E-11 6.6E-16 101.6 9.9 102 69-172 91-201 (317)
222 2p35_A Trans-aconitate 2-methy 99.3 2E-11 6.8E-16 98.2 9.5 95 67-171 33-132 (259)
223 3s1s_A Restriction endonucleas 99.3 2.1E-10 7.3E-15 104.8 16.9 104 41-147 295-409 (878)
224 2qfm_A Spermine synthase; sper 99.3 2.7E-11 9.1E-16 102.0 10.2 110 67-176 188-319 (364)
225 2bm8_A Cephalosporin hydroxyla 99.2 1.6E-11 5.4E-16 98.3 8.1 96 68-171 82-187 (236)
226 2b2c_A Spermidine synthase; be 99.2 1.9E-11 6.6E-16 101.8 8.8 102 67-171 108-222 (314)
227 3uzu_A Ribosomal RNA small sub 99.2 6.7E-11 2.3E-15 96.9 11.1 98 54-158 31-134 (279)
228 3bxo_A N,N-dimethyltransferase 99.2 3.6E-11 1.2E-15 95.4 9.1 95 67-171 40-141 (239)
229 2gs9_A Hypothetical protein TT 99.2 5.7E-11 2E-15 92.7 9.8 94 67-171 36-132 (211)
230 3ftd_A Dimethyladenosine trans 99.2 1E-10 3.6E-15 94.3 11.4 98 53-159 19-117 (249)
231 2avn_A Ubiquinone/menaquinone 99.2 1.4E-10 4.6E-15 93.7 11.5 95 67-172 54-153 (260)
232 4azs_A Methyltransferase WBDD; 99.2 6.2E-11 2.1E-15 106.3 10.3 76 68-145 67-142 (569)
233 3ufb_A Type I restriction-modi 99.2 7.3E-10 2.5E-14 98.4 17.0 101 40-147 197-312 (530)
234 3dou_A Ribosomal RNA large sub 99.2 4.9E-10 1.7E-14 86.7 13.7 120 49-181 9-149 (191)
235 2g72_A Phenylethanolamine N-me 99.2 6.8E-10 2.3E-14 91.0 15.2 104 67-170 71-214 (289)
236 3opn_A Putative hemolysin; str 99.2 5.8E-10 2E-14 89.0 14.1 140 67-221 37-201 (232)
237 1vlm_A SAM-dependent methyltra 99.2 3.4E-10 1.2E-14 89.0 12.0 89 68-171 48-139 (219)
238 1qzz_A RDMB, aclacinomycin-10- 99.2 1.7E-09 5.8E-14 91.7 16.9 99 67-172 182-288 (374)
239 1ej0_A FTSJ; methyltransferase 99.1 7.1E-10 2.4E-14 83.3 12.7 95 67-174 22-139 (180)
240 1qyr_A KSGA, high level kasuga 99.1 7.1E-11 2.4E-15 95.4 7.3 91 54-150 10-103 (252)
241 3cc8_A Putative methyltransfer 99.1 4E-10 1.4E-14 88.5 10.9 96 67-171 32-130 (230)
242 3gwz_A MMCR; methyltransferase 99.1 4.5E-09 1.5E-13 89.3 17.8 98 67-171 202-307 (369)
243 3hp7_A Hemolysin, putative; st 99.1 2E-09 6.9E-14 88.4 15.0 98 67-170 85-184 (291)
244 1p91_A Ribosomal RNA large sub 99.1 6.7E-10 2.3E-14 89.9 11.9 93 67-172 85-179 (269)
245 1x19_A CRTF-related protein; m 99.1 3.7E-09 1.3E-13 89.3 16.4 98 67-171 190-295 (359)
246 2cmg_A Spermidine synthase; tr 99.1 2.1E-10 7.1E-15 93.2 7.6 95 67-171 72-171 (262)
247 1yub_A Ermam, rRNA methyltrans 99.1 1.4E-11 4.9E-16 99.0 0.7 88 55-150 19-106 (245)
248 2qe6_A Uncharacterized protein 99.1 5.6E-09 1.9E-13 85.2 15.4 102 68-172 78-197 (274)
249 3lcv_B Sisomicin-gentamicin re 99.1 7.3E-10 2.5E-14 89.1 9.8 93 67-168 132-233 (281)
250 1tw3_A COMT, carminomycin 4-O- 99.0 1.3E-09 4.6E-14 91.9 10.5 98 67-171 183-288 (360)
251 2r3s_A Uncharacterized protein 99.0 1.1E-09 3.9E-14 91.3 9.9 99 67-171 165-271 (335)
252 3i53_A O-methyltransferase; CO 99.0 3.7E-09 1.3E-13 88.4 12.9 98 67-171 169-274 (332)
253 3dp7_A SAM-dependent methyltra 99.0 3.1E-09 1.1E-13 90.1 12.6 101 67-171 179-287 (363)
254 3frh_A 16S rRNA methylase; met 99.0 2.8E-09 9.7E-14 84.8 11.3 92 67-168 105-203 (253)
255 2aot_A HMT, histamine N-methyl 99.0 1.5E-09 5.2E-14 89.1 10.0 104 67-171 52-172 (292)
256 2plw_A Ribosomal RNA methyltra 99.0 1E-08 3.5E-13 79.1 13.7 93 67-172 22-155 (201)
257 3mcz_A O-methyltransferase; ad 99.0 2E-09 6.7E-14 90.7 9.5 100 68-171 180-287 (352)
258 2oo3_A Protein involved in cat 99.0 6.3E-10 2.2E-14 90.4 5.7 98 68-167 92-194 (283)
259 3cvo_A Methyltransferase-like 98.9 1E-08 3.4E-13 79.8 11.8 113 68-184 31-168 (202)
260 4e2x_A TCAB9; kijanose, tetron 98.9 1.6E-09 5.4E-14 93.3 8.0 96 67-171 107-208 (416)
261 1af7_A Chemotaxis receptor met 98.9 3.3E-09 1.1E-13 86.6 9.4 101 68-171 106-252 (274)
262 2k4m_A TR8_protein, UPF0146 pr 98.9 3.5E-09 1.2E-13 77.5 8.1 106 39-167 11-119 (153)
263 2nyu_A Putative ribosomal RNA 98.9 2.2E-08 7.5E-13 76.9 13.1 95 67-173 22-147 (196)
264 2ip2_A Probable phenazine-spec 98.9 6E-09 2.1E-13 87.0 9.6 96 69-171 169-272 (334)
265 1g55_A DNA cytosine methyltran 98.9 2.4E-08 8.1E-13 84.1 13.0 130 68-211 2-159 (343)
266 4fzv_A Putative methyltransfer 98.8 1.8E-08 6.1E-13 85.1 10.6 82 65-149 146-235 (359)
267 2wa2_A Non-structural protein 98.8 1.6E-09 5.5E-14 88.6 4.1 97 67-171 82-193 (276)
268 2oxt_A Nucleoside-2'-O-methylt 98.8 1.6E-09 5.6E-14 88.0 3.7 97 67-171 74-185 (265)
269 3giw_A Protein of unknown func 98.8 4.1E-08 1.4E-12 79.8 10.9 104 68-171 79-200 (277)
270 2p41_A Type II methyltransfera 98.8 3.5E-09 1.2E-13 87.8 4.2 96 67-171 82-191 (305)
271 2zfu_A Nucleomethylin, cerebra 98.8 2.4E-08 8.3E-13 77.9 8.6 107 67-202 67-177 (215)
272 3g7u_A Cytosine-specific methy 98.8 6E-08 2E-12 82.6 11.4 95 69-168 3-117 (376)
273 3ua3_A Protein arginine N-meth 98.7 8.5E-08 2.9E-12 86.6 11.2 100 68-168 410-531 (745)
274 3sso_A Methyltransferase; macr 98.7 2E-08 6.9E-13 85.6 6.8 95 67-170 216-323 (419)
275 1wg8_A Predicted S-adenosylmet 98.7 3.1E-08 1.1E-12 80.4 7.4 76 67-146 22-98 (285)
276 2xyq_A Putative 2'-O-methyl tr 98.7 3.7E-08 1.3E-12 80.9 7.9 86 66-171 62-171 (290)
277 2qy6_A UPF0209 protein YFCK; s 98.7 3.7E-07 1.2E-11 73.7 13.4 107 67-173 60-215 (257)
278 4gqb_A Protein arginine N-meth 98.7 1.2E-07 4.2E-12 85.3 11.2 94 68-168 358-464 (637)
279 4a6d_A Hydroxyindole O-methylt 98.7 1.8E-07 6E-12 79.0 11.4 98 67-171 179-283 (353)
280 3lst_A CALO1 methyltransferase 98.6 2.6E-07 8.8E-12 77.7 11.8 95 67-171 184-286 (348)
281 3o4f_A Spermidine synthase; am 98.6 3.6E-07 1.2E-11 74.9 10.7 102 67-171 83-198 (294)
282 1fp2_A Isoflavone O-methyltran 98.6 1E-07 3.6E-12 80.2 7.3 91 67-171 188-288 (352)
283 3reo_A (ISO)eugenol O-methyltr 98.6 2.7E-07 9.3E-12 78.2 9.4 91 67-171 203-300 (368)
284 1fp1_D Isoliquiritigenin 2'-O- 98.5 2E-07 6.8E-12 79.1 8.2 90 67-170 209-305 (372)
285 2zig_A TTHA0409, putative modi 98.5 2E-07 7E-12 76.8 8.0 58 52-112 223-280 (297)
286 3p9c_A Caffeic acid O-methyltr 98.5 3.5E-07 1.2E-11 77.5 8.9 91 67-171 201-298 (364)
287 1zg3_A Isoflavanone 4'-O-methy 98.5 2E-07 6.9E-12 78.6 7.2 91 67-171 193-293 (358)
288 2wk1_A NOVP; transferase, O-me 98.5 7.8E-07 2.7E-11 72.7 10.3 102 68-171 107-244 (282)
289 2c7p_A Modification methylase 98.5 1E-06 3.5E-11 73.5 10.5 92 68-169 11-119 (327)
290 1g60_A Adenine-specific methyl 98.4 4E-07 1.4E-11 73.6 6.6 49 66-114 211-259 (260)
291 3ubt_Y Modification methylase 98.4 4.1E-06 1.4E-10 69.7 12.3 92 69-169 1-109 (331)
292 2qrv_A DNA (cytosine-5)-methyl 98.3 4.2E-06 1.4E-10 68.8 9.6 93 67-164 15-127 (295)
293 3c6k_A Spermine synthase; sper 98.2 3E-06 1E-10 71.6 8.5 106 67-172 205-332 (381)
294 4h0n_A DNMT2; SAH binding, tra 98.2 5.7E-06 2E-10 69.2 9.6 94 69-168 4-117 (333)
295 1i4w_A Mitochondrial replicati 98.2 9.1E-06 3.1E-10 68.4 10.4 73 53-128 40-118 (353)
296 2ld4_A Anamorsin; methyltransf 98.1 1.7E-06 5.8E-11 65.2 4.0 85 66-170 11-100 (176)
297 4auk_A Ribosomal RNA large sub 98.1 5.5E-06 1.9E-10 69.8 7.3 92 66-168 210-303 (375)
298 3qv2_A 5-cytosine DNA methyltr 98.0 1.4E-05 4.9E-10 66.6 8.0 76 68-150 10-89 (327)
299 3tka_A Ribosomal RNA small sub 97.9 2.5E-05 8.5E-10 64.9 7.0 83 57-145 49-136 (347)
300 3me5_A Cytosine-specific methy 97.9 0.00027 9.2E-09 61.8 13.7 78 68-147 88-179 (482)
301 1boo_A Protein (N-4 cytosine-s 97.8 2E-05 6.8E-10 65.6 4.6 63 66-129 251-313 (323)
302 4ft4_B DNA (cytosine-5)-methyl 97.7 0.00056 1.9E-08 63.4 14.3 54 68-126 212-272 (784)
303 1eg2_A Modification methylase 97.7 3.3E-05 1.1E-09 64.2 5.0 48 66-113 241-291 (319)
304 3swr_A DNA (cytosine-5)-methyl 97.6 0.00046 1.6E-08 65.3 11.4 99 67-170 539-669 (1002)
305 3p8z_A Mtase, non-structural p 97.2 0.003 1E-07 49.8 9.8 88 49-146 63-153 (267)
306 3av4_A DNA (cytosine-5)-methyl 97.2 0.0017 5.8E-08 63.0 9.9 96 68-168 851-978 (1330)
307 2py6_A Methyltransferase FKBM; 97.1 0.0013 4.3E-08 56.5 8.1 58 66-123 225-290 (409)
308 3gcz_A Polyprotein; flavivirus 97.1 0.00026 8.8E-09 57.3 3.1 87 49-146 75-165 (282)
309 3evf_A RNA-directed RNA polyme 97.0 0.0018 6.2E-08 52.2 7.4 115 48-171 58-184 (277)
310 3lkz_A Non-structural protein 97.0 0.0031 1.1E-07 51.3 8.3 73 67-146 94-169 (321)
311 4dkj_A Cytosine-specific methy 96.9 0.0036 1.2E-07 53.5 8.3 44 68-111 10-60 (403)
312 2px2_A Genome polyprotein [con 96.8 0.00025 8.6E-09 56.6 1.0 71 66-145 72-147 (269)
313 3eld_A Methyltransferase; flav 96.4 0.0039 1.3E-07 50.7 5.3 48 49-99 66-115 (300)
314 3vyw_A MNMC2; tRNA wobble urid 96.4 0.026 8.8E-07 46.3 9.9 123 68-203 97-247 (308)
315 3r24_A NSP16, 2'-O-methyl tran 96.2 0.075 2.6E-06 43.3 11.6 116 50-183 93-229 (344)
316 3fwz_A Inner membrane protein 96.1 0.043 1.5E-06 39.2 8.9 103 68-177 7-111 (140)
317 2efj_A 3,7-dimethylxanthine me 95.9 0.11 3.7E-06 44.0 11.6 74 68-145 53-157 (384)
318 3llv_A Exopolyphosphatase-rela 95.7 0.11 3.7E-06 36.9 9.6 103 68-180 6-112 (141)
319 3c85_A Putative glutathione-re 95.5 0.14 4.9E-06 38.1 9.9 98 68-173 39-141 (183)
320 3tos_A CALS11; methyltransfera 95.3 0.13 4.3E-06 41.2 9.5 116 69-184 71-234 (257)
321 3pvc_A TRNA 5-methylaminomethy 95.2 0.061 2.1E-06 49.0 8.3 104 68-171 59-211 (689)
322 1lss_A TRK system potassium up 95.1 0.22 7.6E-06 34.8 9.6 98 68-173 4-105 (140)
323 3l4b_C TRKA K+ channel protien 95.0 0.15 5.1E-06 39.2 9.0 94 71-172 3-100 (218)
324 1m6e_X S-adenosyl-L-methionnin 94.8 0.04 1.4E-06 46.3 5.6 78 67-145 51-147 (359)
325 1boo_A Protein (N-4 cytosine-s 94.8 0.29 9.9E-06 40.2 10.6 57 116-174 14-87 (323)
326 3l9w_A Glutathione-regulated p 94.6 0.13 4.5E-06 43.9 8.5 97 68-173 4-104 (413)
327 2zig_A TTHA0409, putative modi 94.3 0.1 3.5E-06 42.3 6.9 56 116-173 21-99 (297)
328 3b5i_A S-adenosyl-L-methionine 93.9 0.24 8.2E-06 41.7 8.3 21 67-87 52-72 (374)
329 1eg2_A Modification methylase 93.4 0.48 1.6E-05 38.9 9.3 58 117-176 39-111 (319)
330 2qrv_B DNA (cytosine-5)-methyl 93.4 0.051 1.7E-06 42.6 3.2 76 68-164 33-117 (230)
331 1g60_A Adenine-specific methyl 93.3 0.14 4.7E-06 40.8 5.6 58 117-176 5-79 (260)
332 3o26_A Salutaridine reductase; 93.1 0.79 2.7E-05 36.6 10.2 78 68-146 12-100 (311)
333 2pv0_B DNA (cytosine-5)-methyl 92.9 0.085 2.9E-06 44.4 4.0 76 68-164 189-273 (386)
334 1f8f_A Benzyl alcohol dehydrog 92.7 0.45 1.5E-05 39.6 8.3 96 66-170 189-288 (371)
335 1id1_A Putative potassium chan 92.5 0.93 3.2E-05 32.5 8.9 102 68-175 3-109 (153)
336 2aef_A Calcium-gated potassium 92.5 0.6 2E-05 36.1 8.3 93 68-171 9-105 (234)
337 1pl8_A Human sorbitol dehydrog 92.3 0.85 2.9E-05 37.7 9.4 93 67-170 171-272 (356)
338 3ps9_A TRNA 5-methylaminomethy 92.1 0.45 1.6E-05 43.0 8.1 106 68-173 67-221 (676)
339 3s2e_A Zinc-containing alcohol 91.9 0.55 1.9E-05 38.5 7.8 95 66-170 165-262 (340)
340 1lnq_A MTHK channels, potassiu 91.5 0.65 2.2E-05 38.1 7.8 92 69-171 116-211 (336)
341 2g1u_A Hypothetical protein TM 91.4 0.41 1.4E-05 34.5 5.8 99 67-174 18-121 (155)
342 1rjd_A PPM1P, carboxy methyl t 91.3 0.63 2.2E-05 38.5 7.5 60 67-127 97-179 (334)
343 1xg5_A ARPG836; short chain de 91.1 3.7 0.00013 32.3 11.8 77 68-145 32-119 (279)
344 4dcm_A Ribosomal RNA large sub 90.9 0.99 3.4E-05 37.9 8.5 95 68-172 39-137 (375)
345 1zkd_A DUF185; NESG, RPR58, st 90.6 1.6 5.6E-05 36.8 9.4 58 53-110 65-132 (387)
346 4fn4_A Short chain dehydrogena 90.4 1.4 4.7E-05 34.9 8.5 78 67-145 6-92 (254)
347 4g81_D Putative hexonate dehyd 90.4 0.77 2.6E-05 36.4 6.9 78 67-145 8-94 (255)
348 1e3j_A NADP(H)-dependent ketos 90.3 2.1 7.1E-05 35.2 9.8 97 67-170 168-270 (352)
349 1pqw_A Polyketide synthase; ro 90.2 0.92 3.1E-05 33.9 7.0 95 66-170 37-136 (198)
350 2dpo_A L-gulonate 3-dehydrogen 90.1 5 0.00017 32.8 11.8 92 69-168 7-120 (319)
351 3f1l_A Uncharacterized oxidore 89.7 1.1 3.7E-05 35.0 7.3 77 68-145 12-100 (252)
352 3ius_A Uncharacterized conserv 89.6 2.8 9.5E-05 32.9 9.8 88 69-171 6-103 (286)
353 3ucx_A Short chain dehydrogena 89.4 2.1 7.3E-05 33.5 8.9 77 68-145 11-96 (264)
354 3i1j_A Oxidoreductase, short c 89.2 1.1 3.9E-05 34.5 7.0 77 68-145 14-102 (247)
355 3dqp_A Oxidoreductase YLBE; al 89.1 1.3 4.3E-05 33.6 7.1 93 70-172 2-107 (219)
356 4ej6_A Putative zinc-binding d 88.9 1 3.5E-05 37.5 6.9 95 67-170 182-283 (370)
357 2hmt_A YUAA protein; RCK, KTN, 88.8 2.1 7.1E-05 29.7 7.7 95 68-172 6-106 (144)
358 3gms_A Putative NADPH:quinone 88.6 0.69 2.3E-05 38.0 5.6 96 66-170 143-242 (340)
359 3fpc_A NADP-dependent alcohol 88.3 0.7 2.4E-05 38.1 5.5 94 67-168 166-263 (352)
360 3lyl_A 3-oxoacyl-(acyl-carrier 88.1 3.1 0.0001 32.0 8.9 76 68-145 5-90 (247)
361 1v3u_A Leukotriene B4 12- hydr 87.8 1.5 5.2E-05 35.7 7.2 93 66-169 144-242 (333)
362 3e8x_A Putative NAD-dependent 87.7 4.2 0.00014 30.9 9.4 94 68-172 21-132 (236)
363 4dvj_A Putative zinc-dependent 87.6 2.8 9.7E-05 34.6 8.9 95 67-170 171-269 (363)
364 3o38_A Short chain dehydrogena 87.6 2.5 8.5E-05 33.0 8.2 79 67-145 21-109 (266)
365 3uko_A Alcohol dehydrogenase c 87.5 1.9 6.5E-05 35.8 7.8 91 67-168 193-292 (378)
366 4g65_A TRK system potassium up 87.1 1.1 3.9E-05 38.6 6.2 71 68-146 3-77 (461)
367 1p0f_A NADP-dependent alcohol 86.9 2.8 9.5E-05 34.7 8.4 92 67-169 191-291 (373)
368 2c0c_A Zinc binding alcohol de 86.9 3.2 0.00011 34.3 8.8 93 67-169 163-259 (362)
369 3jv7_A ADH-A; dehydrogenase, n 86.9 2.3 8E-05 34.7 7.9 97 66-170 170-269 (345)
370 2z1n_A Dehydrogenase; reductas 86.8 7.4 0.00025 30.2 10.5 76 68-145 7-93 (260)
371 3ip1_A Alcohol dehydrogenase, 86.6 2.5 8.7E-05 35.5 8.1 98 66-170 212-317 (404)
372 3m6i_A L-arabinitol 4-dehydrog 86.5 12 0.00042 30.6 12.3 96 67-170 179-282 (363)
373 4b7c_A Probable oxidoreductase 86.3 1.7 5.7E-05 35.5 6.6 94 67-169 149-246 (336)
374 2jhf_A Alcohol dehydrogenase E 86.2 3.3 0.00011 34.3 8.5 93 66-169 190-291 (374)
375 3ew7_A LMO0794 protein; Q8Y8U8 86.1 1.9 6.5E-05 32.3 6.5 90 70-171 2-103 (221)
376 1cdo_A Alcohol dehydrogenase; 86.0 2.9 9.9E-05 34.6 8.1 93 66-169 191-292 (374)
377 1uuf_A YAHK, zinc-type alcohol 85.9 1.8 6.3E-05 35.9 6.7 91 66-168 193-285 (369)
378 3rih_A Short chain dehydrogena 85.7 0.9 3.1E-05 36.6 4.6 77 68-145 41-127 (293)
379 2fzw_A Alcohol dehydrogenase c 85.7 3.2 0.00011 34.3 8.2 93 66-169 189-290 (373)
380 2gn4_A FLAA1 protein, UDP-GLCN 85.3 8.8 0.0003 31.3 10.6 100 68-172 21-143 (344)
381 1e3i_A Alcohol dehydrogenase, 85.2 3.3 0.00011 34.3 8.0 93 66-169 194-295 (376)
382 4a2c_A Galactitol-1-phosphate 85.2 5.4 0.00019 32.4 9.2 98 66-171 159-260 (346)
383 1vj0_A Alcohol dehydrogenase, 85.1 1.8 6E-05 36.2 6.3 94 66-169 194-296 (380)
384 2dph_A Formaldehyde dismutase; 85.1 1.9 6.4E-05 36.2 6.5 98 66-168 184-296 (398)
385 2c07_A 3-oxoacyl-(acyl-carrier 85.0 9.7 0.00033 30.0 10.5 76 68-145 44-129 (285)
386 3two_A Mannitol dehydrogenase; 84.9 1.5 5.1E-05 36.0 5.7 88 66-170 175-264 (348)
387 1rjw_A ADH-HT, alcohol dehydro 84.9 2 6.9E-05 35.1 6.5 92 67-168 164-258 (339)
388 3pk0_A Short-chain dehydrogena 84.7 3.3 0.00011 32.4 7.5 77 68-145 10-96 (262)
389 2nwq_A Probable short-chain de 84.6 13 0.00044 29.2 11.2 74 69-145 22-105 (272)
390 2hcy_A Alcohol dehydrogenase 1 84.6 1.2 4.1E-05 36.6 4.9 93 66-168 168-266 (347)
391 3t4x_A Oxidoreductase, short c 84.3 3.9 0.00013 32.0 7.7 77 68-145 10-93 (267)
392 2eih_A Alcohol dehydrogenase; 84.0 2.6 8.8E-05 34.5 6.7 94 66-168 165-262 (343)
393 3tjr_A Short chain dehydrogena 83.9 5.2 0.00018 32.0 8.5 76 68-145 31-116 (301)
394 3fbg_A Putative arginate lyase 83.8 3.9 0.00013 33.5 7.8 93 67-168 150-245 (346)
395 3lf2_A Short chain oxidoreduct 83.8 5.8 0.0002 30.9 8.6 77 68-145 8-95 (265)
396 2b4q_A Rhamnolipids biosynthes 83.6 2.7 9.3E-05 33.3 6.5 75 68-145 29-113 (276)
397 3qwb_A Probable quinone oxidor 83.6 2.3 7.7E-05 34.7 6.2 95 66-169 147-245 (334)
398 3ic5_A Putative saccharopine d 83.4 7.5 0.00026 25.6 8.8 79 68-159 5-90 (118)
399 1xu9_A Corticosteroid 11-beta- 83.4 4.4 0.00015 32.0 7.7 76 68-144 28-113 (286)
400 3jyn_A Quinone oxidoreductase; 83.1 2.2 7.5E-05 34.6 5.9 96 66-170 139-238 (325)
401 1qor_A Quinone oxidoreductase; 83.0 2.9 9.8E-05 33.9 6.6 94 66-169 139-237 (327)
402 3qiv_A Short-chain dehydrogena 82.9 6 0.00021 30.4 8.3 76 68-145 9-94 (253)
403 3h7a_A Short chain dehydrogena 82.8 3.4 0.00011 32.2 6.7 75 68-145 7-91 (252)
404 4ibo_A Gluconate dehydrogenase 82.6 2.8 9.5E-05 33.1 6.2 76 68-145 26-111 (271)
405 4dup_A Quinone oxidoreductase; 82.5 2 6.8E-05 35.4 5.5 94 66-169 166-263 (353)
406 3gaf_A 7-alpha-hydroxysteroid 82.3 5.9 0.0002 30.8 8.0 76 68-145 12-97 (256)
407 3m2p_A UDP-N-acetylglucosamine 82.3 4.4 0.00015 32.3 7.4 90 69-171 3-109 (311)
408 4gx0_A TRKA domain protein; me 82.1 6.3 0.00022 34.6 8.9 70 68-145 127-200 (565)
409 3nyw_A Putative oxidoreductase 81.9 6 0.00021 30.6 7.9 77 68-145 7-95 (250)
410 3v2h_A D-beta-hydroxybutyrate 81.9 5.4 0.00019 31.5 7.7 77 68-145 25-112 (281)
411 2d8a_A PH0655, probable L-thre 81.5 2.8 9.5E-05 34.4 6.0 93 67-169 167-265 (348)
412 4eye_A Probable oxidoreductase 81.4 3.1 0.00011 34.0 6.3 93 66-169 158-255 (342)
413 3rkr_A Short chain oxidoreduct 81.4 6.1 0.00021 30.7 7.8 76 68-145 29-114 (262)
414 3ruf_A WBGU; rossmann fold, UD 81.3 10 0.00036 30.5 9.5 102 68-171 25-151 (351)
415 4eez_A Alcohol dehydrogenase 1 81.1 8.9 0.0003 31.1 9.0 97 66-170 162-262 (348)
416 3rku_A Oxidoreductase YMR226C; 81.0 8.9 0.0003 30.4 8.8 77 68-145 33-123 (287)
417 3sju_A Keto reductase; short-c 80.9 6.9 0.00023 30.9 8.0 76 68-145 24-109 (279)
418 3ioy_A Short-chain dehydrogena 80.8 8.1 0.00028 31.2 8.6 77 68-145 8-95 (319)
419 3grk_A Enoyl-(acyl-carrier-pro 80.7 8.5 0.00029 30.6 8.5 77 67-145 30-117 (293)
420 4fs3_A Enoyl-[acyl-carrier-pro 80.5 4.8 0.00016 31.5 6.9 79 67-145 5-94 (256)
421 3tfo_A Putative 3-oxoacyl-(acy 80.5 6.6 0.00023 30.8 7.7 76 68-145 4-89 (264)
422 2dpm_A M.dpnii 1, protein (ade 80.4 2.7 9.1E-05 33.8 5.4 44 54-102 25-68 (284)
423 3svt_A Short-chain type dehydr 80.3 7.7 0.00026 30.5 8.1 77 68-145 11-99 (281)
424 4dry_A 3-oxoacyl-[acyl-carrier 80.1 4.4 0.00015 32.1 6.6 77 68-145 33-119 (281)
425 2uyo_A Hypothetical protein ML 79.5 11 0.00039 30.5 9.0 58 68-126 103-164 (310)
426 3f9i_A 3-oxoacyl-[acyl-carrier 79.3 7.4 0.00025 29.8 7.6 74 67-145 13-92 (249)
427 1e7w_A Pteridine reductase; di 79.1 5.1 0.00017 31.9 6.7 59 68-128 9-73 (291)
428 1mxh_A Pteridine reductase 2; 78.8 5.2 0.00018 31.3 6.6 76 68-145 11-102 (276)
429 2jah_A Clavulanic acid dehydro 78.7 12 0.0004 28.8 8.6 76 68-145 7-92 (247)
430 1zej_A HBD-9, 3-hydroxyacyl-CO 78.7 22 0.00076 28.5 10.4 93 68-171 12-107 (293)
431 3ggo_A Prephenate dehydrogenas 78.7 13 0.00044 30.1 9.1 87 68-168 33-125 (314)
432 2ehd_A Oxidoreductase, oxidore 78.6 8.5 0.00029 29.1 7.7 72 68-145 5-86 (234)
433 2g1p_A DNA adenine methylase; 78.6 2.8 9.6E-05 33.6 4.9 43 54-102 18-60 (278)
434 3l77_A Short-chain alcohol deh 78.4 9.2 0.00031 29.0 7.8 76 68-145 2-88 (235)
435 1kol_A Formaldehyde dehydrogen 78.4 3.8 0.00013 34.3 5.9 96 66-169 184-298 (398)
436 3t7c_A Carveol dehydrogenase; 78.2 11 0.00038 29.9 8.5 76 68-145 28-125 (299)
437 3v8b_A Putative dehydrogenase, 78.2 8.5 0.00029 30.5 7.7 76 68-145 28-113 (283)
438 3t8y_A CHEB, chemotaxis respon 78.1 15 0.00053 25.8 8.9 82 90-173 26-108 (164)
439 4f3n_A Uncharacterized ACR, CO 78.1 1.5 5E-05 37.6 3.3 58 52-111 124-188 (432)
440 4egf_A L-xylulose reductase; s 78.1 6.4 0.00022 30.8 6.9 76 68-145 20-106 (266)
441 1yb1_A 17-beta-hydroxysteroid 78.0 12 0.00039 29.3 8.5 76 68-145 31-116 (272)
442 3awd_A GOX2181, putative polyo 77.8 12 0.00042 28.6 8.5 76 68-145 13-98 (260)
443 3ce6_A Adenosylhomocysteinase; 77.7 13 0.00044 32.4 9.2 89 67-173 273-363 (494)
444 1y1p_A ARII, aldehyde reductas 77.7 25 0.00084 27.9 13.2 77 68-146 11-92 (342)
445 1wly_A CAAR, 2-haloacrylate re 77.4 5 0.00017 32.5 6.3 95 66-169 144-242 (333)
446 2rhc_B Actinorhodin polyketide 77.3 12 0.00042 29.3 8.5 76 68-145 22-107 (277)
447 2qhx_A Pteridine reductase 1; 77.3 5.9 0.0002 32.2 6.7 59 68-128 46-110 (328)
448 3enk_A UDP-glucose 4-epimerase 77.3 4.2 0.00014 32.7 5.8 102 68-171 5-129 (341)
449 2ae2_A Protein (tropinone redu 77.2 12 0.00043 28.8 8.4 76 68-145 9-95 (260)
450 3sx2_A Putative 3-ketoacyl-(ac 77.2 12 0.0004 29.3 8.3 76 68-145 13-110 (278)
451 1ae1_A Tropinone reductase-I; 77.2 13 0.00045 29.0 8.6 76 68-145 21-107 (273)
452 2zb4_A Prostaglandin reductase 77.1 7.3 0.00025 31.9 7.3 94 67-169 158-258 (357)
453 2x9g_A PTR1, pteridine reducta 77.1 4.7 0.00016 31.9 5.9 76 68-145 23-114 (288)
454 3ftp_A 3-oxoacyl-[acyl-carrier 76.9 7.6 0.00026 30.5 7.1 76 68-145 28-113 (270)
455 1f0y_A HCDH, L-3-hydroxyacyl-C 76.8 26 0.00089 27.8 11.3 41 69-109 16-58 (302)
456 2b5w_A Glucose dehydrogenase; 76.8 4.1 0.00014 33.5 5.6 90 69-169 174-271 (357)
457 4fc7_A Peroxisomal 2,4-dienoyl 76.6 9.2 0.00031 30.0 7.5 76 68-145 27-113 (277)
458 3h2s_A Putative NADH-flavin re 76.6 5.2 0.00018 29.9 5.8 66 70-146 2-71 (224)
459 3imf_A Short chain dehydrogena 76.5 6.3 0.00021 30.6 6.4 76 68-145 6-91 (257)
460 3pxx_A Carveol dehydrogenase; 76.4 13 0.00044 29.1 8.4 76 68-145 10-107 (287)
461 3uve_A Carveol dehydrogenase ( 76.4 12 0.00042 29.4 8.2 76 68-145 11-112 (286)
462 4g65_A TRK system potassium up 76.4 12 0.00042 32.1 8.7 75 67-146 234-309 (461)
463 3pgx_A Carveol dehydrogenase; 76.3 12 0.00043 29.2 8.2 76 68-145 15-113 (280)
464 3hzh_A Chemotaxis response reg 76.3 16 0.00055 25.4 8.2 82 90-172 37-120 (157)
465 1zem_A Xylitol dehydrogenase; 75.9 13 0.00043 28.9 8.1 76 68-145 7-92 (262)
466 3eul_A Possible nitrate/nitrit 75.1 17 0.0006 24.9 8.9 82 89-172 15-98 (152)
467 3abi_A Putative uncharacterize 75.1 6.5 0.00022 32.5 6.5 77 68-158 16-97 (365)
468 1iy8_A Levodione reductase; ox 74.9 15 0.0005 28.6 8.2 77 68-145 13-100 (267)
469 3r1i_A Short-chain type dehydr 74.7 7.2 0.00025 30.7 6.4 77 67-145 31-117 (276)
470 1xkq_A Short-chain reductase f 74.6 11 0.00038 29.5 7.5 77 68-145 6-94 (280)
471 3rd5_A Mypaa.01249.C; ssgcid, 74.5 7.7 0.00026 30.7 6.5 74 67-145 15-94 (291)
472 3oig_A Enoyl-[acyl-carrier-pro 74.5 8.7 0.0003 29.8 6.8 78 68-145 7-95 (266)
473 1zcj_A Peroxisomal bifunctiona 74.5 40 0.0014 28.8 14.4 94 69-171 38-150 (463)
474 3tsc_A Putative oxidoreductase 74.4 17 0.00058 28.4 8.5 76 68-145 11-109 (277)
475 4da9_A Short-chain dehydrogena 74.4 17 0.00057 28.6 8.5 76 68-145 29-115 (280)
476 2qq5_A DHRS1, dehydrogenase/re 74.3 12 0.0004 29.0 7.5 76 68-145 5-91 (260)
477 3tox_A Short chain dehydrogena 73.9 5.6 0.00019 31.5 5.5 76 68-145 8-93 (280)
478 3uog_A Alcohol dehydrogenase; 73.8 6.3 0.00021 32.5 6.0 93 66-169 188-285 (363)
479 3cxt_A Dehydrogenase with diff 73.8 14 0.00049 29.3 8.0 76 68-145 34-119 (291)
480 4e12_A Diketoreductase; oxidor 73.7 31 0.0011 27.1 12.7 92 69-168 5-118 (283)
481 3asu_A Short-chain dehydrogena 73.1 21 0.00072 27.4 8.7 70 71-145 3-82 (248)
482 3ai3_A NADPH-sorbose reductase 73.1 18 0.00062 27.9 8.4 76 68-145 7-93 (263)
483 3r6d_A NAD-dependent epimerase 73.0 17 0.0006 27.0 8.0 94 70-172 7-109 (221)
484 1o5i_A 3-oxoacyl-(acyl carrier 72.9 28 0.00096 26.6 9.4 68 67-145 18-89 (249)
485 1yf3_A DNA adenine methylase; 72.7 2.8 9.7E-05 33.2 3.4 43 54-103 15-57 (259)
486 1smk_A Malate dehydrogenase, g 72.6 22 0.00075 28.9 9.0 100 68-176 8-130 (326)
487 1pzg_A LDH, lactate dehydrogen 72.6 37 0.0013 27.6 11.1 103 68-178 9-139 (331)
488 3ado_A Lambda-crystallin; L-gu 72.4 38 0.0013 27.6 10.4 95 68-170 6-121 (319)
489 4imr_A 3-oxoacyl-(acyl-carrier 72.3 6.6 0.00023 30.9 5.6 75 68-145 33-117 (275)
490 2zat_A Dehydrogenase/reductase 72.3 17 0.00059 28.0 8.0 76 68-145 14-99 (260)
491 1xhl_A Short-chain dehydrogena 72.3 15 0.00051 29.2 7.8 77 68-145 26-114 (297)
492 4id9_A Short-chain dehydrogena 72.0 6.2 0.00021 31.8 5.5 87 68-171 19-126 (347)
493 4iin_A 3-ketoacyl-acyl carrier 71.9 16 0.00054 28.5 7.8 76 68-145 29-115 (271)
494 4dio_A NAD(P) transhydrogenase 71.9 8 0.00027 32.8 6.2 41 67-107 189-231 (405)
495 3oec_A Carveol dehydrogenase ( 71.9 16 0.00056 29.3 8.0 76 68-145 46-143 (317)
496 3p2y_A Alanine dehydrogenase/p 71.8 9.3 0.00032 32.1 6.5 41 67-107 183-225 (381)
497 4hp8_A 2-deoxy-D-gluconate 3-d 71.8 19 0.00065 28.2 8.0 75 67-145 8-87 (247)
498 2v6b_A L-LDH, L-lactate dehydr 71.5 37 0.0013 27.1 10.6 99 70-176 2-121 (304)
499 3ppi_A 3-hydroxyacyl-COA dehyd 71.4 16 0.00053 28.6 7.7 71 68-144 30-110 (281)
500 1cyd_A Carbonyl reductase; sho 71.3 23 0.00077 26.7 8.4 72 68-145 7-84 (244)
No 1
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=100.00 E-value=3.2e-33 Score=242.53 Aligned_cols=193 Identities=40% Similarity=0.612 Sum_probs=175.8
Q ss_pred ccCCCCCccccCceEEEeCCCceeeeecCeeEEEcCCccccCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHH
Q 043853 4 VNTSVGNTSVGEEEYTLYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGL 83 (222)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~ 83 (222)
+|++..+.+++ ++..++|+..+.+.++|..|.+++++|+|.|...++.+.+++.+ . .++.+|||+|||+|.+++
T Consensus 233 ~~~~~~~~~~g-~~~~l~G~~~i~e~~~g~~f~~~~~~F~q~n~~~~e~l~~~~~~-~----~~~~~VLDlgcG~G~~sl 306 (425)
T 2jjq_A 233 VNRSKSDVSYG-DIERFWGKEFIRERLDDVDYLIHPNSFFQTNSYQAVNLVRKVSE-L----VEGEKILDMYSGVGTFGI 306 (425)
T ss_dssp ECCSSSCCSCC-EEEEEEECSCEEEEETTEEEEECTTSCCCSBHHHHHHHHHHHHH-H----CCSSEEEEETCTTTHHHH
T ss_pred cCCCCCceecc-eEEEEECCCeEEEEECCEEEEEccccccccCHHHHHHHHHHhhc-c----CCCCEEEEeeccchHHHH
Confidence 45666666777 88999999999999999999999999999999999999888877 2 247899999999999999
Q ss_pred HHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCCCCCccHHHHHHHHhCCC
Q 043853 84 TLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKA 163 (222)
Q Consensus 84 ~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~~~~~~~~~~l~~l~~ 163 (222)
.+++.+.+|+|+|+|+.+++.|++|++.++++ ++++++|+.++... .||+|++|||+.++...+++.+..++|
T Consensus 307 ~la~~~~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~~~------~fD~Vv~dPPr~g~~~~~~~~l~~l~p 379 (425)
T 2jjq_A 307 YLAKRGFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVSVK------GFDTVIVDPPRAGLHPRLVKRLNREKP 379 (425)
T ss_dssp HHHHTTCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCCCT------TCSEEEECCCTTCSCHHHHHHHHHHCC
T ss_pred HHHHcCCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcCcc------CCCEEEEcCCccchHHHHHHHHHhcCC
Confidence 99998889999999999999999999999998 99999999886532 799999999999998889999999999
Q ss_pred CcEEEEeeCccchHhhHHHhhccCCCCccCCCeEEeEeeeeccCCCCCceeEEEEEE
Q 043853 164 PRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLLE 220 (222)
Q Consensus 164 ~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~~~~ 220 (222)
++++|++|++.++++|+..| . |++..+.++||||+|+|+|+|++|+
T Consensus 380 ~givyvsc~p~tlarDl~~l---------~--y~l~~~~~~DmFP~T~HvE~v~ll~ 425 (425)
T 2jjq_A 380 GVIVYVSCNPETFARDVKML---------D--YRIDEIVALDMFPHTPHVELVAKLV 425 (425)
T ss_dssp SEEEEEESCHHHHHHHHHHS---------S--CCEEEEEEECCSTTSSCCEEEEEEC
T ss_pred CcEEEEECChHHHHhHHhhC---------e--EEEEEEEEECcCCCCceEEEEEEEC
Confidence 99999999999999999887 3 9999999999999999999999984
No 2
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=100.00 E-value=1.1e-32 Score=235.72 Aligned_cols=194 Identities=27% Similarity=0.433 Sum_probs=170.6
Q ss_pred CceEEEeCCCceeeee--cC--eeEEEcCCccccCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCC
Q 043853 15 EEEYTLYGKSNITETL--RG--LTFQISANSFFQTNTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVK 90 (222)
Q Consensus 15 ~~~~~~~g~~~~~~~~--~~--~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~ 90 (222)
.+..+++|+..+.+.. +| ..|.+++++|+|.|...++.+.+++.+.+... +.+|||+|||+|.+++.+|+.+.
T Consensus 160 ~~~~~~~G~~~i~e~~~~~g~~~~~~~~~~~F~Q~n~~~~~~l~~~~~~~~~~~---~~~vLDl~cG~G~~~l~la~~~~ 236 (369)
T 3bt7_A 160 TKTKIELDQDYIDERLPVAGKEMIYRQVENSFTQPNAAMNIQMLEWALDVTKGS---KGDLLELYCGNGNFSLALARNFD 236 (369)
T ss_dssp TTEEEESSCSEEEEECCBTTBCCEEEEETTSCCCSBHHHHHHHHHHHHHHTTTC---CSEEEEESCTTSHHHHHHGGGSS
T ss_pred CceEEEcCCCEEEEEeccCCceEEEEECCCCeecCCHHHHHHHHHHHHHHhhcC---CCEEEEccCCCCHHHHHHHhcCC
Confidence 4567889998888877 68 77888899999999999999999998886432 46899999999999999999888
Q ss_pred eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCC------------CCCcEEEECCCCCCccHHHHHHH
Q 043853 91 HVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAF------------PKPDIVISDPNRPGMHMKLIKFL 158 (222)
Q Consensus 91 ~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~------------~~fD~ii~~pp~~~~~~~~~~~l 158 (222)
+|+|+|+|+.+++.|++|++.+++++++++++|+.++...+.... ..||+|++|||+.++...+.+.+
T Consensus 237 ~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~g~~~~~~~~l 316 (369)
T 3bt7_A 237 RVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDPPRSGLDSETEKMV 316 (369)
T ss_dssp EEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEECCCTTCCCHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhccccccccccccccCCCCEEEECcCccccHHHHHHHH
Confidence 999999999999999999999999889999999988765433211 26999999999999988888888
Q ss_pred HhCCCCcEEEEeeCccchHhhHHHhhccCCCCccCCCeEEeEeeeeccCCCCCceeEEEEEEeC
Q 043853 159 LKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLLELS 222 (222)
Q Consensus 159 ~~l~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~~~~~~ 222 (222)
. +++.++|++|++.++++++..+. .+|++..+.++|+||+|+|+|+|++|+|.
T Consensus 317 ~--~~g~ivyvsc~p~t~ard~~~l~---------~~y~~~~~~~~D~FP~T~HvE~v~ll~r~ 369 (369)
T 3bt7_A 317 Q--AYPRILYISCNPETLCKNLETLS---------QTHKVERLALFDQFPYTHHMQCGVLLTAK 369 (369)
T ss_dssp T--TSSEEEEEESCHHHHHHHHHHHH---------HHEEEEEEEEECCSTTSSCCEEEEEEEEC
T ss_pred h--CCCEEEEEECCHHHHHHHHHHHh---------hCcEEEEEEeeccCCCCCcEEEEEEEEeC
Confidence 6 78899999999999999999884 36999999999999999999999999873
No 3
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=100.00 E-value=6.3e-32 Score=235.37 Aligned_cols=194 Identities=35% Similarity=0.501 Sum_probs=170.4
Q ss_pred eEEEeCCCceeeeecCeeEEEcCCccccCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCCeEEEEe
Q 043853 17 EYTLYGKSNITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVKHVYGYE 96 (222)
Q Consensus 17 ~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~~v~gvD 96 (222)
...++|...+.+ +.|..|.+++++|+|.|...++.+++++.+.+... ++.+|||+|||+|.+++.+++...+++|+|
T Consensus 239 ~~~l~g~~~~~~-~~g~~~~~~~~~f~q~n~~~~e~l~~~~~~~l~~~--~~~~VLDlgcG~G~~~~~la~~~~~V~gvD 315 (433)
T 1uwv_A 239 LETVSGEMPWYD-SNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQ--PEDRVLDLFCGMGNFTLPLATQAASVVGVE 315 (433)
T ss_dssp CEEEECCCCEEE-ETTEEEECCSSSCCCSBHHHHHHHHHHHHHHHTCC--TTCEEEEESCTTTTTHHHHHTTSSEEEEEE
T ss_pred EEEEeCCCcEEE-ECCEEEEECcccccccCHHHHHHHHHHHHHhhcCC--CCCEEEECCCCCCHHHHHHHhhCCEEEEEe
Confidence 466788776655 88999999999999999999999999998887543 367999999999999999998888999999
Q ss_pred CCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCCCCCccHHHHHHHHhCCCCcEEEEeeCccch
Q 043853 97 VVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATC 176 (222)
Q Consensus 97 ~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~~~~~~~~~~l~~l~~~~~v~~~~~~~~~ 176 (222)
+|+.+++.|++|++.+++++++++++|+.+....+....+.||+|++|||+.+.. .+++.+..+++++++|++|++.++
T Consensus 316 ~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~dPPr~g~~-~~~~~l~~~~p~~ivyvsc~p~tl 394 (433)
T 1uwv_A 316 GVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAA-GVMQQIIKLEPIRIVYVSCNPATL 394 (433)
T ss_dssp SCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEECCCTTCCH-HHHHHHHHHCCSEEEEEESCHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEECCCCccHH-HHHHHHHhcCCCeEEEEECChHHH
Confidence 9999999999999999998999999999885432111124799999999999875 788888888999999999999999
Q ss_pred HhhHHHhhccCCCCccCCCeEEeEeeeeccCCCCCceeEEEEEEeC
Q 043853 177 ARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLLELS 222 (222)
Q Consensus 177 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~~~~~~ 222 (222)
++++..+. +.||++..+.++|+||+|+|+|+|++|+|.
T Consensus 395 ard~~~l~--------~~Gy~~~~~~~~d~Fp~t~HvE~v~ll~r~ 432 (433)
T 1uwv_A 395 ARDSEALL--------KAGYTIARLAMLDMFPHTGHLESMVLFSRV 432 (433)
T ss_dssp HHHHHHHH--------HTTCEEEEEEEECCSTTSSCCEEEEEEEC-
T ss_pred HhhHHHHH--------HCCcEEEEEEEeccCCCCCeEEEEEEEEEC
Confidence 99999886 679999999999999999999999999873
No 4
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.89 E-value=3.1e-22 Score=164.14 Aligned_cols=195 Identities=22% Similarity=0.250 Sum_probs=139.5
Q ss_pred CCCCccccCceEEEeCCCc-eeeeecCeeEEEcCCccccCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHH
Q 043853 7 SVGNTSVGEEEYTLYGKSN-ITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTL 85 (222)
Q Consensus 7 ~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~l 85 (222)
+..+.+...++++++|+.. ...+++|..|.+++.+||+.+...++.+.. .... .++.+|||+|||+|.+++.+
T Consensus 64 ~~~~~~~~~~~~~l~G~~~~~~~~e~g~~f~~~~~~~f~~~~~~~e~~~~----~~~~--~~~~~VLDlgcG~G~~s~~l 137 (272)
T 3a27_A 64 QITGEFRTPHVKILYGKETETIHKEYGCLFKLDVAKIMWSQGNIEERKRM----AFIS--NENEVVVDMFAGIGYFTIPL 137 (272)
T ss_dssp ---------CCEEEECSCCEEEEEETTEEEEEETTTSCCCGGGHHHHHHH----HTSC--CTTCEEEETTCTTTTTHHHH
T ss_pred CCCCcccccceEEEeCCCcEEEEEECCEEEEEechhEEECCCchHHHHHH----HHhc--CCCCEEEEecCcCCHHHHHH
Confidence 3445666778899999871 224468999999999988877666655431 1112 34789999999999999999
Q ss_pred hhcCC--eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCCCCCccHHHHHHHHhCCC
Q 043853 86 ARWVK--HVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKA 163 (222)
Q Consensus 86 a~~~~--~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~~~~~~~~~~l~~l~~ 163 (222)
++.++ +|+|+|+|+.+++.|++|++.+++++++++++|+.++ .. .+.||+|+++||+ +...-+...+..++|
T Consensus 138 a~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~-~~----~~~~D~Vi~d~p~-~~~~~l~~~~~~Lkp 211 (272)
T 3a27_A 138 AKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV-EL----KDVADRVIMGYVH-KTHKFLDKTFEFLKD 211 (272)
T ss_dssp HHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC-CC----TTCEEEEEECCCS-SGGGGHHHHHHHEEE
T ss_pred HHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc-Cc----cCCceEEEECCcc-cHHHHHHHHHHHcCC
Confidence 98754 9999999999999999999999998899999999887 32 2479999999996 444444555667899
Q ss_pred CcEEEEeeCcc------chHhhHHHhhccCCCCccCCCe--EEeEeeeeccC-CCCCceeEEEEEE
Q 043853 164 PRIVYVSCNPA------TCARDLDYLCHGVGDQNIKGCY--KLKSLQPVDMF-PHTPHIECVCLLE 220 (222)
Q Consensus 164 ~~~v~~~~~~~------~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~-p~~~~~~~v~~~~ 220 (222)
+|++|++|... +..+.++.+.+ ..++ +......++.+ |.++|+-.-..+.
T Consensus 212 gG~l~~s~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~v~~~~p~~~~~~~d~~~~ 270 (272)
T 3a27_A 212 RGVIHYHETVAEKIMYERPIERLKFYAE-------KNGYKLIDYEVRKIKKYAPGVWHVVVDAKFE 270 (272)
T ss_dssp EEEEEEEEEEEGGGTTTHHHHHHHHHHH-------HTTEEEEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCEEEEEEcCccccccccHHHHHHHHHH-------HhCCeeEEeEEEEEEEECCCCCEEEEEEEEe
Confidence 99999999754 44455555542 2234 44466777777 7777765544443
No 5
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.85 E-value=3.1e-20 Score=159.92 Aligned_cols=158 Identities=16% Similarity=0.201 Sum_probs=123.8
Q ss_pred ccCceEEEeCCC---ceeeeecCeeEEEcCC-----ccccCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHH
Q 043853 13 VGEEEYTLYGKS---NITETLRGLTFQISAN-----SFFQTNTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLT 84 (222)
Q Consensus 13 ~~~~~~~~~g~~---~~~~~~~~~~~~~~~~-----~f~~~~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~ 84 (222)
...+.+.++|+. .+.+.++|..|.+++. +||+.+... .+++... .++.+|||+|||+|.+++.
T Consensus 167 ~~~~~~~l~G~~~~~~~~~~~~g~~f~v~~~~~~~tgff~~~~~~----~~~l~~~-----~~~~~VLDl~cG~G~~sl~ 237 (396)
T 3c0k_A 167 MELTQGPVTGELPPALLPIEEHGMKLLVDIQHGHKTGYYLDQRDS----RLATRRY-----VENKRVLNCFSYTGGFAVS 237 (396)
T ss_dssp CCCEEEEEESCCCCSSEEEEETTEEEEECTTTSSTTSSCGGGHHH----HHHHHHH-----CTTCEEEEESCTTCSHHHH
T ss_pred CCccceeEcCCCCCceEEEEECCEEEEEeccccccCCcCcCHHHH----HHHHHHh-----hCCCeEEEeeccCCHHHHH
Confidence 445678899984 7889999999999987 999865443 2333333 1378999999999999999
Q ss_pred Hhhc-CCeEEEEeCCHHHHHHHHHHHHHcCC-C-cEEEEeCchhchhhhcCCCCCCCcEEEECCCCC------------C
Q 043853 85 LARW-VKHVYGYEVVPQAISDACRNAKLNNI-S-NATFVQGDLNKIGGDFGNAFPKPDIVISDPNRP------------G 149 (222)
Q Consensus 85 la~~-~~~v~gvD~~~~~i~~a~~n~~~~~~-~-~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~------------~ 149 (222)
+++. ..+|+|+|+|+.+++.|++|++.+++ + +++++++|+.++...+......||+|++|||+. +
T Consensus 238 la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~ 317 (396)
T 3c0k_A 238 ALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRG 317 (396)
T ss_dssp HHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCSSTTTCSSSSSCCCTH
T ss_pred HHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEECCCCCCCChhHHHHHHHH
Confidence 9987 45999999999999999999999999 7 799999999887654321224799999999962 2
Q ss_pred ccHHHHHHHHhCCCCcEEEEeeCccchHhh
Q 043853 150 MHMKLIKFLLKLKAPRIVYVSCNPATCARD 179 (222)
Q Consensus 150 ~~~~~~~~l~~l~~~~~v~~~~~~~~~~~~ 179 (222)
...-+...+..++|+|++|++|++.+...+
T Consensus 318 ~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~ 347 (396)
T 3c0k_A 318 YKDINMLAIQLLNEGGILLTFSCSGLMTSD 347 (396)
T ss_dssp HHHHHHHHHHTEEEEEEEEEEECCTTCCHH
T ss_pred HHHHHHHHHHhcCCCcEEEEEeCCCcCCHH
Confidence 223334455668999999999988766544
No 6
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.85 E-value=5.7e-20 Score=151.10 Aligned_cols=192 Identities=18% Similarity=0.196 Sum_probs=131.7
Q ss_pred CCccccCceEEEeCCCce-eeeecCeeEEEcC--CccccCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHH
Q 043853 9 GNTSVGEEEYTLYGKSNI-TETLRGLTFQISA--NSFFQTNTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTL 85 (222)
Q Consensus 9 ~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~--~~f~~~~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~l 85 (222)
.+.....+...++|+... ...++|..|.++. ..|++.+......+.+. + .++.+|||+|||+|.+++.+
T Consensus 72 ~~~~~~~~~~~l~G~~~~~~~~e~g~~f~~d~~~~~f~~~~~~~~~~l~~~----~----~~~~~VLDlgcG~G~~~~~l 143 (278)
T 2frn_A 72 HGETRKPDYELLYGSDTVTVHVENGIKYKLDVAKIMFSPANVKERVRMAKV----A----KPDELVVDMFAGIGHLSLPI 143 (278)
T ss_dssp --------CEEEECSCCEEEEEETTEEEEEETTTSCCCGGGHHHHHHHHHH----C----CTTCEEEETTCTTTTTHHHH
T ss_pred cCCccccceEEEECCCCEEEEEECCEEEEEEccceeEcCCcHHHHHHHHHh----C----CCCCEEEEecccCCHHHHHH
Confidence 455667788899998754 4468999999985 46777665655554332 2 24789999999999999999
Q ss_pred hhcCC-eEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhhhcCCCCCCCcEEEECCCCCCccHHHHHHHHhCCC
Q 043853 86 ARWVK-HVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKA 163 (222)
Q Consensus 86 a~~~~-~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~~~~~~~~~~l~~l~~ 163 (222)
++.+. +|+|+|+|+.+++.|++|++.+++++ ++++++|+.++.. ...||+|+++||... ..-+....+.++|
T Consensus 144 a~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-----~~~fD~Vi~~~p~~~-~~~l~~~~~~Lkp 217 (278)
T 2frn_A 144 AVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-----ENIADRILMGYVVRT-HEFIPKALSIAKD 217 (278)
T ss_dssp HHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-----CSCEEEEEECCCSSG-GGGHHHHHHHEEE
T ss_pred HHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-----cCCccEEEECCchhH-HHHHHHHHHHCCC
Confidence 98766 69999999999999999999999986 9999999988765 258999999998432 2233334455789
Q ss_pred CcEEEEeeCc------cchHhhHHHhhccCCCCccCCCeEEeEee---eeccCCCCCceeEEEEEEe
Q 043853 164 PRIVYVSCNP------ATCARDLDYLCHGVGDQNIKGCYKLKSLQ---PVDMFPHTPHIECVCLLEL 221 (222)
Q Consensus 164 ~~~v~~~~~~------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~v~~~~~ 221 (222)
+|.+++.++. ......+...+. +.||++.... ...+.|..+|...-..+.|
T Consensus 218 gG~l~~~~~~~~~~~~~~~~~~i~~~~~-------~~G~~~~~~~~~~v~~~~p~~~h~~~d~~v~r 277 (278)
T 2frn_A 218 GAIIHYHNTVPEKLMPREPFETFKRITK-------EYGYDVEKLNELKIKRYAPGVWHVVLDLRVFK 277 (278)
T ss_dssp EEEEEEEEEEEGGGTTTTTHHHHHHHHH-------HTTCEEEEEEEEEEEEETTTEEEEEEEEEEEC
T ss_pred CeEEEEEEeeccccccccHHHHHHHHHH-------HcCCeeEEeeeEEEEecCCCceEEEEEEEEec
Confidence 8887765532 233334443332 5577766633 2345677777655444433
No 7
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.84 E-value=1.1e-20 Score=162.11 Aligned_cols=158 Identities=17% Similarity=0.165 Sum_probs=120.3
Q ss_pred cCceEEEeCCC---ceeeeecCeeEEEcCC-----ccccCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHH
Q 043853 14 GEEEYTLYGKS---NITETLRGLTFQISAN-----SFFQTNTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTL 85 (222)
Q Consensus 14 ~~~~~~~~g~~---~~~~~~~~~~~~~~~~-----~f~~~~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~l 85 (222)
..++++++|+. .+...++|.+|.+++. +|| .+......++ .+.+ .++.+|||+|||+|.+++.+
T Consensus 159 ~~~~~~l~G~~~~~~~~v~e~g~~f~v~~~~~~~t~ff-~~~~~~~~~~---~~~~----~~~~~VLDl~cGtG~~sl~l 230 (385)
T 2b78_A 159 DNVSAHLYGQEAPEQFLILENGISYNVFLNDGLMTGIF-LDQRQVRNEL---INGS----AAGKTVLNLFSYTAAFSVAA 230 (385)
T ss_dssp -CCEEEEEESCCCSSEEEEETTEEEEECSSSSSCCSSC-GGGHHHHHHH---HHTT----TBTCEEEEETCTTTHHHHHH
T ss_pred CccceeecCCCCCceEEEEECCEEEEEeccccccCCcC-CcHHHHHHHH---HHHh----cCCCeEEEEeeccCHHHHHH
Confidence 56788899985 6766779999999987 999 4555554443 2332 23689999999999999999
Q ss_pred hhcC-CeEEEEeCCHHHHHHHHHHHHHcCCC--cEEEEeCchhchhhhcCCCCCCCcEEEECCCCC----CccHHHH---
Q 043853 86 ARWV-KHVYGYEVVPQAISDACRNAKLNNIS--NATFVQGDLNKIGGDFGNAFPKPDIVISDPNRP----GMHMKLI--- 155 (222)
Q Consensus 86 a~~~-~~v~gvD~~~~~i~~a~~n~~~~~~~--~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~----~~~~~~~--- 155 (222)
|+.+ .+|+|+|+|+.+++.|++|++.++++ +++++++|+.++...+......||+|++|||+. +......
T Consensus 231 a~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~ 310 (385)
T 2b78_A 231 AMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIIIDPPSFARNKKEVFSVSKDY 310 (385)
T ss_dssp HHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCC-----CCCCHHHHH
T ss_pred HHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEECCCCCCCChhhHHHHHHHH
Confidence 9854 59999999999999999999999987 799999999887544322234799999999973 1211222
Q ss_pred ----HH-HHhCCCCcEEEEeeCccchHhh
Q 043853 156 ----KF-LLKLKAPRIVYVSCNPATCARD 179 (222)
Q Consensus 156 ----~~-l~~l~~~~~v~~~~~~~~~~~~ 179 (222)
.. ...++|+|+++++|++.++.++
T Consensus 311 ~~ll~~~~~~L~pgG~l~~~~~~~~~~~~ 339 (385)
T 2b78_A 311 HKLIRQGLEILSENGLIIASTNAANMTVS 339 (385)
T ss_dssp HHHHHHHHHTEEEEEEEEEEECCTTSCHH
T ss_pred HHHHHHHHHhcCCCcEEEEEeCCCcCCHH
Confidence 22 3458999999999988776554
No 8
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.83 E-value=1.9e-19 Score=151.86 Aligned_cols=190 Identities=16% Similarity=0.181 Sum_probs=139.2
Q ss_pred CCCccccCceEEEeCCC--ceeeeecCeeEEEcCCccccCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHH
Q 043853 8 VGNTSVGEEEYTLYGKS--NITETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTL 85 (222)
Q Consensus 8 ~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~l 85 (222)
..+.....+...++|+. .....++|..|.+++..|++.+...++.+ .+...+ .++.+|||+|||+|.+++.
T Consensus 140 ~~g~~r~~~~~~l~G~~~~~~~~~e~g~~f~~d~~~~~~~~~~~~er~--~i~~~~----~~~~~VLDlg~G~G~~~l~- 212 (336)
T 2yx1_A 140 VKGEFRVRELEHLAGENRTLTIHKENGYRLWVDIAKVYFSPRLGGERA--RIMKKV----SLNDVVVDMFAGVGPFSIA- 212 (336)
T ss_dssp -----CCCCEEEEEECCCCEEEEEETTEEEEEETTTSCCCGGGHHHHH--HHHHHC----CTTCEEEETTCTTSHHHHH-
T ss_pred CCCcccccceEEEeCCCCcEEEEEECCEEEEEehHHhccCCccHHHHH--HHHHhc----CCCCEEEEccCccCHHHHh-
Confidence 34555666788999986 34566799999999998888766666654 333433 2478999999999999999
Q ss_pred hhcCCeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEeCchhchhhhcCCCCCCCcEEEECCCCCCccHHHHHHH-HhCCC
Q 043853 86 ARWVKHVYGYEVVPQAISDACRNAKLNNIS-NATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFL-LKLKA 163 (222)
Q Consensus 86 a~~~~~v~gvD~~~~~i~~a~~n~~~~~~~-~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~~~~~~~~~~l-~~l~~ 163 (222)
++.+.+++|+|+|+.+++.|++|++.++++ +++++++|+.++. ..||+|++|||+... .+++.+ ..+++
T Consensus 213 a~~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~-------~~fD~Vi~dpP~~~~--~~l~~~~~~L~~ 283 (336)
T 2yx1_A 213 CKNAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD-------VKGNRVIMNLPKFAH--KFIDKALDIVEE 283 (336)
T ss_dssp TTTSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC-------CCEEEEEECCTTTGG--GGHHHHHHHEEE
T ss_pred ccCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc-------CCCcEEEECCcHhHH--HHHHHHHHHcCC
Confidence 887779999999999999999999999984 6999999998875 379999999986532 445544 44688
Q ss_pred CcEEEEe-eCccchHhhHHHhhccCCCCccCCCeEEeEeeeec-cCCCCCceeEEEEEEe
Q 043853 164 PRIVYVS-CNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVD-MFPHTPHIECVCLLEL 221 (222)
Q Consensus 164 ~~~v~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~v~~~~~ 221 (222)
+|.+++. |.+. .....+.+.+ ..++++.....+. +.|++.|+.....+.+
T Consensus 284 gG~l~~~~~~~~-~~~~~~~l~~-------~~~~~i~~~~~v~~~~p~~~~~~~~~~l~~ 335 (336)
T 2yx1_A 284 GGVIHYYTIGKD-FDKAIKLFEK-------KCDCEVLEKRIVKSYAPREYILALDFKINK 335 (336)
T ss_dssp EEEEEEEEEESS-SHHHHHHHHH-------HSEEEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCEEEEEEeecC-chHHHHHHHH-------hcCCcEEEEEEEeccCCCCCEEEEEEEEec
Confidence 8876654 4444 4444444432 1167777766664 5688888888777765
No 9
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.82 E-value=2.6e-19 Score=146.67 Aligned_cols=148 Identities=19% Similarity=0.257 Sum_probs=109.5
Q ss_pred CCccccCceEEEeCCCc-eeeeecCeeEEEcCC--ccccCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHH
Q 043853 9 GNTSVGEEEYTLYGKSN-ITETLRGLTFQISAN--SFFQTNTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTL 85 (222)
Q Consensus 9 ~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~--~f~~~~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~l 85 (222)
...+...++.+++|+.. ....++|..|.++.. .|++.+.....++. +.. .++++|||+|||+|.+++.+
T Consensus 72 ~g~~R~~~~e~L~G~~~~~~~~E~G~~~~~D~~k~~f~~~~~~er~ri~----~~~----~~g~~VlD~~aG~G~~~i~~ 143 (278)
T 3k6r_A 72 HGETRKPDYELLYGSDTVTVHVENGIKYKLDVAKIMFSPANVKERVRMA----KVA----KPDELVVDMFAGIGHLSLPI 143 (278)
T ss_dssp --------CEEEECSCCEEEEEETTEEEEEETTTSCCCGGGHHHHHHHH----HHC----CTTCEEEETTCTTTTTTHHH
T ss_pred CCccccccceEEecCCcEEEEEECCEEEEEeccceEEcCCcHHHHHHHH----Hhc----CCCCEEEEecCcCcHHHHHH
Confidence 34556667889999984 445789999999964 56665555544433 332 35889999999999999988
Q ss_pred hhcC-CeEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhhhcCCCCCCCcEEEECCCCCCccHHHHH-HHHhCC
Q 043853 86 ARWV-KHVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIK-FLLKLK 162 (222)
Q Consensus 86 a~~~-~~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~~~~~~~~~-~l~~l~ 162 (222)
|+.+ .+|+|+|+||.+++.+++|++.|++++ ++++++|+.++... ..||.|+.+||... ..+++ .+..++
T Consensus 144 a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~-----~~~D~Vi~~~p~~~--~~~l~~a~~~lk 216 (278)
T 3k6r_A 144 AVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGE-----NIADRILMGYVVRT--HEFIPKALSIAK 216 (278)
T ss_dssp HHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCC-----SCEEEEEECCCSSG--GGGHHHHHHHEE
T ss_pred HHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccc-----cCCCEEEECCCCcH--HHHHHHHHHHcC
Confidence 8765 599999999999999999999999976 99999999887542 57999999988542 23333 455578
Q ss_pred CCcEEEEee
Q 043853 163 APRIVYVSC 171 (222)
Q Consensus 163 ~~~~v~~~~ 171 (222)
++|++.+.+
T Consensus 217 ~gG~ih~~~ 225 (278)
T 3k6r_A 217 DGAIIHYHN 225 (278)
T ss_dssp EEEEEEEEE
T ss_pred CCCEEEEEe
Confidence 999886554
No 10
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.80 E-value=1e-17 Score=140.91 Aligned_cols=152 Identities=20% Similarity=0.152 Sum_probs=110.0
Q ss_pred EEEeCC----CceeeeecCeeEEEcCCccccC--CHHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCCe
Q 043853 18 YTLYGK----SNITETLRGLTFQISANSFFQT--NTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVKH 91 (222)
Q Consensus 18 ~~~~g~----~~~~~~~~~~~~~~~~~~f~~~--~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~~ 91 (222)
+.++|. ..+...++|..|.+++..++++ ...+.. .++++.+.+.. ..++.+|||+|||+|.+++.+++.+.+
T Consensus 100 ~~~~g~~~~~~~~~i~e~g~~f~v~~~~~~~tg~f~dq~~-~~~~l~~~~~~-~~~~~~VLDlgcGtG~~sl~la~~ga~ 177 (332)
T 2igt_A 100 RWRFPKEALGETWPLSLLGVEFLGRFTAFRHVGVFPEQIV-HWEWLKNAVET-ADRPLKVLNLFGYTGVASLVAAAAGAE 177 (332)
T ss_dssp EEECSSSCCCSEEEEEETTEEEEEECCSSSCCSCCGGGHH-HHHHHHHHHHH-SSSCCEEEEETCTTCHHHHHHHHTTCE
T ss_pred ceEecCCCCCCceEEEECCEEEEEecCccccceechHHHH-HHHHHHHHHHh-cCCCCcEEEcccccCHHHHHHHHcCCE
Confidence 567773 4677888999999998766654 222222 23344444321 123679999999999999999987779
Q ss_pred EEEEeCCHHHHHHHHHHHHHcCCCc--EEEEeCchhchhhhcCCCCCCCcEEEECCCCCCc------------cHHHHHH
Q 043853 92 VYGYEVVPQAISDACRNAKLNNISN--ATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGM------------HMKLIKF 157 (222)
Q Consensus 92 v~gvD~~~~~i~~a~~n~~~~~~~~--v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~~~------------~~~~~~~ 157 (222)
|+++|+|+.+++.|++|++.+++++ ++++++|+.++..........||+|++|||+.+. ...+++.
T Consensus 178 V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~ 257 (332)
T 2igt_A 178 VTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDI 257 (332)
T ss_dssp EEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999874 9999999988764321112479999999995321 1344444
Q ss_pred H-HhCCCCcEEEEee
Q 043853 158 L-LKLKAPRIVYVSC 171 (222)
Q Consensus 158 l-~~l~~~~~v~~~~ 171 (222)
+ ..++|+|++++.+
T Consensus 258 ~~~~LkpgG~lli~~ 272 (332)
T 2igt_A 258 CREILSPKALGLVLT 272 (332)
T ss_dssp HHHTBCTTCCEEEEE
T ss_pred HHHhcCcCcEEEEEE
Confidence 3 4489999876655
No 11
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.79 E-value=3.1e-19 Score=152.99 Aligned_cols=157 Identities=16% Similarity=0.178 Sum_probs=118.6
Q ss_pred ccCceEEEeCCC--ceeeeecCeeEEEcCC-----ccccCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHH
Q 043853 13 VGEEEYTLYGKS--NITETLRGLTFQISAN-----SFFQTNTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTL 85 (222)
Q Consensus 13 ~~~~~~~~~g~~--~~~~~~~~~~~~~~~~-----~f~~~~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~l 85 (222)
...+...++|+. .+.+.++|..|.+++. +||+...... .++ ... ++.+|||+|||+|.+++.+
T Consensus 158 ~~~~~~~l~G~~~~~~~~~e~g~~f~i~~~~~~~~g~f~~~~~~~----~~~---~~~---~~~~VLDlg~G~G~~~~~l 227 (382)
T 1wxx_A 158 LPLYVRPLLGEVPERVQVQEGRVRYLVDLRAGQKTGAYLDQRENR----LYM---ERF---RGERALDVFSYAGGFALHL 227 (382)
T ss_dssp CCCEEEEEESCCCSEEEEEETTEEEEEECSTTSCCCCCGGGHHHH----HHG---GGC---CEEEEEEETCTTTHHHHHH
T ss_pred CCcccceecCCCCceEEEEECCEEEEEEchhcccCccccchHHHH----HHH---Hhc---CCCeEEEeeeccCHHHHHH
Confidence 456777899986 6778889999999986 6776432221 112 222 3679999999999999999
Q ss_pred hhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCCCCCcc-----------HHH
Q 043853 86 ARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMH-----------MKL 154 (222)
Q Consensus 86 a~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~~~~-----------~~~ 154 (222)
++.+.+|+|+|+|+.+++.|++|++.+++++++++++|+.++...+......||+|++|||+.... ..+
T Consensus 228 a~~~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~ 307 (382)
T 1wxx_A 228 ALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDPPAFAKGKKDVERAYRAYKEV 307 (382)
T ss_dssp HHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCCSTTSHHHHHHHHHHH
T ss_pred HHhCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECCCCCCCChhHHHHHHHHHHHH
Confidence 887779999999999999999999999998899999999887654322235799999999963321 222
Q ss_pred HH-HHHhCCCCcEEEEeeCccchHhh
Q 043853 155 IK-FLLKLKAPRIVYVSCNPATCARD 179 (222)
Q Consensus 155 ~~-~l~~l~~~~~v~~~~~~~~~~~~ 179 (222)
+. .+..++|+|+++++++......+
T Consensus 308 l~~~~~~LkpgG~l~~~~~~~~~~~~ 333 (382)
T 1wxx_A 308 NLRAIKLLKEGGILATASCSHHMTEP 333 (382)
T ss_dssp HHHHHHTEEEEEEEEEEECCTTSCHH
T ss_pred HHHHHHhcCCCCEEEEEECCCCCCHH
Confidence 23 34457899999988876555443
No 12
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.79 E-value=7e-18 Score=130.53 Aligned_cols=141 Identities=18% Similarity=0.188 Sum_probs=108.4
Q ss_pred eeecCeeEEEcCCccccCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhc-CCeEEEEeCCHHHHHHHH
Q 043853 28 ETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARW-VKHVYGYEVVPQAISDAC 106 (222)
Q Consensus 28 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~-~~~v~gvD~~~~~i~~a~ 106 (222)
.++.|..+..++..+.+......+.+.+++..... .++.+|||+|||+|.+++.++.. ..+++|+|+|+.+++.|+
T Consensus 8 g~~~g~~l~~~~~~~rp~~~~~~~~l~~~l~~~~~---~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~ 84 (189)
T 3p9n_A 8 GVAGGRRIAVPPRGTRPTTDRVRESLFNIVTARRD---LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIA 84 (189)
T ss_dssp STTTTCEEECCSCCC---CHHHHHHHHHHHHHHSC---CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHH
T ss_pred eccCCcEecCCCCCCccCcHHHHHHHHHHHHhccC---CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHH
Confidence 34678888888877777777777777776665432 24689999999999999976654 458999999999999999
Q ss_pred HHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCCCCCc---cHHHHHHHH---hCCCCcEEEEeeCc
Q 043853 107 RNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGM---HMKLIKFLL---KLKAPRIVYVSCNP 173 (222)
Q Consensus 107 ~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~~~---~~~~~~~l~---~l~~~~~v~~~~~~ 173 (222)
+|++.+++++++++++|+.++..... .+.||+|+++||+... ...+++.+. .++|+|++++.+..
T Consensus 85 ~~~~~~~~~~v~~~~~d~~~~~~~~~--~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 85 RNIEALGLSGATLRRGAVAAVVAAGT--TSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp HHHHHHTCSCEEEEESCHHHHHHHCC--SSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred HHHHHcCCCceEEEEccHHHHHhhcc--CCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 99999998789999999998865432 2589999999996643 345555554 47999999987754
No 13
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.78 E-value=1.1e-18 Score=150.30 Aligned_cols=154 Identities=25% Similarity=0.260 Sum_probs=113.7
Q ss_pred ccCceEEEeCCC--ceeeeecCeeEEEcCC----ccccCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHh
Q 043853 13 VGEEEYTLYGKS--NITETLRGLTFQISAN----SFFQTNTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLA 86 (222)
Q Consensus 13 ~~~~~~~~~g~~--~~~~~~~~~~~~~~~~----~f~~~~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la 86 (222)
+..+.+.++|+. .+...++|..|.+++. +||+..... ..++..++ .++.+|||+|||+|.+++.++
T Consensus 165 ~~~~~~~l~g~~~~~~~~~e~g~~~~~~~~~~~tg~f~~~~~~----~~~~~~~~----~~~~~VLDl~~G~G~~~~~la 236 (396)
T 2as0_A 165 LPEIERVLLGKEKYRTIIQEGRAKFIVDMRGQKTGFFLDQREN----RLALEKWV----QPGDRVLDVFTYTGGFAIHAA 236 (396)
T ss_dssp CCCEEEEEEESCCCEEEEEETTEEEEEESSSSSSCCCSTTHHH----HHHHGGGC----CTTCEEEETTCTTTHHHHHHH
T ss_pred CCcccceecCCCCceEEEEeCCEEEEEeccccccCccCCHHHH----HHHHHHHh----hCCCeEEEecCCCCHHHHHHH
Confidence 455778899986 5667789999999974 688753332 22232222 247899999999999999999
Q ss_pred hc-CCeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEeCchhchhhhcCCCCCCCcEEEECCCCCCc-----------cHH
Q 043853 87 RW-VKHVYGYEVVPQAISDACRNAKLNNIS-NATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGM-----------HMK 153 (222)
Q Consensus 87 ~~-~~~v~gvD~~~~~i~~a~~n~~~~~~~-~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~~~-----------~~~ 153 (222)
+. ..+|+|+|+|+.+++.|++|++.++++ +++++++|+.++...+......||+|++|||+... ...
T Consensus 237 ~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~ 316 (396)
T 2as0_A 237 IAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLDPPAFVQHEKDLKAGLRAYFN 316 (396)
T ss_dssp HTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCSSGGGHHHHHHHHHH
T ss_pred HCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEECCCCCCCCHHHHHHHHHHHHH
Confidence 87 459999999999999999999999997 79999999988765432223579999999996331 122
Q ss_pred H-HHHHHhCCCCcEEEEeeCcc
Q 043853 154 L-IKFLLKLKAPRIVYVSCNPA 174 (222)
Q Consensus 154 ~-~~~l~~l~~~~~v~~~~~~~ 174 (222)
+ ...+..++|+|.++++++..
T Consensus 317 ~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 317 VNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp HHHHHHTTEEEEEEEEEEECCT
T ss_pred HHHHHHHhcCCCcEEEEEECCC
Confidence 2 22344478999776665543
No 14
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.78 E-value=1.2e-17 Score=127.56 Aligned_cols=151 Identities=17% Similarity=0.246 Sum_probs=114.7
Q ss_pred eEEEcCCccccCC--HHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHH
Q 043853 34 TFQISANSFFQTN--THQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKL 111 (222)
Q Consensus 34 ~~~~~~~~f~~~~--~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~ 111 (222)
+|.+++..|++.+ ....+.+.+.+.+.+... ++.+|||+|||+|.++..+++...+++|+|+|+.+++.|+++++.
T Consensus 2 ~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~ 79 (183)
T 2yxd_A 2 KYMIPDEEFIRREGVPITKEEIRAVSIGKLNLN--KDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNLAK 79 (183)
T ss_dssp --CCCSTTSCCBTTBCCCCHHHHHHHHHHHCCC--TTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHHHH
T ss_pred CccCCchheeeccCCCcCHHHHHHHHHHHcCCC--CCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHH
Confidence 4667778887766 445555566666666543 377999999999999999998777999999999999999999999
Q ss_pred cCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCCCCCccHHHHHHHHhCCCCcEEEEee-CccchHhhHHHhhccCCCC
Q 043853 112 NNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSC-NPATCARDLDYLCHGVGDQ 190 (222)
Q Consensus 112 ~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~~~~~~~~~~l~~l~~~~~v~~~~-~~~~~~~~~~~l~~~~~~~ 190 (222)
+++++++++++|+.+.... +.||+|+++++ .....+++.+.++ ++|.+++.. ...........+.
T Consensus 80 ~~~~~~~~~~~d~~~~~~~-----~~~D~i~~~~~--~~~~~~l~~~~~~-~gG~l~~~~~~~~~~~~~~~~l~------ 145 (183)
T 2yxd_A 80 FNIKNCQIIKGRAEDVLDK-----LEFNKAFIGGT--KNIEKIIEILDKK-KINHIVANTIVLENAAKIINEFE------ 145 (183)
T ss_dssp TTCCSEEEEESCHHHHGGG-----CCCSEEEECSC--SCHHHHHHHHHHT-TCCEEEEEESCHHHHHHHHHHHH------
T ss_pred cCCCcEEEEECCccccccC-----CCCcEEEECCc--ccHHHHHHHHhhC-CCCEEEEEecccccHHHHHHHHH------
Confidence 9988899999999873322 47999999998 4457888888888 888887776 4444444455554
Q ss_pred ccCCCeEEeEee
Q 043853 191 NIKGCYKLKSLQ 202 (222)
Q Consensus 191 ~~~~~~~~~~~~ 202 (222)
+.||++....
T Consensus 146 --~~g~~~~~~~ 155 (183)
T 2yxd_A 146 --SRGYNVDAVN 155 (183)
T ss_dssp --HTTCEEEEEE
T ss_pred --HcCCeEEEEE
Confidence 4556666543
No 15
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.76 E-value=4e-17 Score=132.56 Aligned_cols=145 Identities=21% Similarity=0.174 Sum_probs=111.8
Q ss_pred CCCeEEEEecccchhHHHHhhcCC-eEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhhhcCCCCCCCcEEEEC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVK-HVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGDFGNAFPKPDIVISD 144 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~-~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~~~~~~~fD~ii~~ 144 (222)
++.+|||+|||+|.+++.+++... +++|+|+++.+++.|++|+..+++++ ++++++|+.++...+. .+.||+|++|
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~--~~~fD~Ii~n 126 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIP--KERADIVTCN 126 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSC--TTCEEEEEEC
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhc--cCCccEEEEC
Confidence 378999999999999999998765 99999999999999999999999874 9999999998764332 2589999999
Q ss_pred CCCCCc----------------------cHHHHHHHH-hCCCCcEEEEeeCccchHhhHHHhhccCCCCccCCCeEEeEe
Q 043853 145 PNRPGM----------------------HMKLIKFLL-KLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSL 201 (222)
Q Consensus 145 pp~~~~----------------------~~~~~~~l~-~l~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (222)
||+... ...+++.+. .++++|.+++...+.........+. +.+|....+
T Consensus 127 pPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~--------~~~~~~~~~ 198 (259)
T 3lpm_A 127 PPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPERLLDIIDIMR--------KYRLEPKRI 198 (259)
T ss_dssp CCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTTHHHHHHHHH--------HTTEEEEEE
T ss_pred CCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHHHHHHHHHHH--------HCCCceEEE
Confidence 995322 123444443 3799999998777766666666654 578999988
Q ss_pred eeeccCCCCCceeEEEEEEe
Q 043853 202 QPVDMFPHTPHIECVCLLEL 221 (222)
Q Consensus 202 ~~~~~~p~~~~~~~v~~~~~ 221 (222)
.++...+..+..-.+..+.+
T Consensus 199 ~~v~~~~~~~~~~~l~~~~k 218 (259)
T 3lpm_A 199 QFVHPRSDREANTVLVEGIK 218 (259)
T ss_dssp EEEESSTTSCCSEEEEEEEE
T ss_pred EEeecCCCCCcEEEEEEEEe
Confidence 88877777765555554443
No 16
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.76 E-value=2.5e-17 Score=135.76 Aligned_cols=138 Identities=20% Similarity=0.296 Sum_probs=109.4
Q ss_pred eeecCeeEEEcCCccccCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhc-CCeEEEEeCCHHHHHHHH
Q 043853 28 ETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARW-VKHVYGYEVVPQAISDAC 106 (222)
Q Consensus 28 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~-~~~v~gvD~~~~~i~~a~ 106 (222)
..+++..|.++++.|.+. +.++.+++++.+.+... ++.+|||+|||+|.+++.+++. ..+++|+|+|+.+++.|+
T Consensus 88 ~~f~~~~~~v~~~~lipr--~~te~lv~~~l~~~~~~--~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~ 163 (284)
T 1nv8_A 88 KEFMGLSFLVEEGVFVPR--PETEELVELALELIRKY--GIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIAR 163 (284)
T ss_dssp EEETTEEEECCTTSCCCC--TTHHHHHHHHHHHHHHH--TCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHH
T ss_pred eEECCeEEEeCCCceecC--hhHHHHHHHHHHHhccc--CCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHH
Confidence 468999999999999864 56666777776665322 3579999999999999999887 569999999999999999
Q ss_pred HHHHHcCCCc-EEEEeCchhchhhhcCCCCCCC---cEEEECCCCCCccH---------------------HHHHHH--H
Q 043853 107 RNAKLNNISN-ATFVQGDLNKIGGDFGNAFPKP---DIVISDPNRPGMHM---------------------KLIKFL--L 159 (222)
Q Consensus 107 ~n~~~~~~~~-v~~~~~d~~~~~~~~~~~~~~f---D~ii~~pp~~~~~~---------------------~~~~~l--~ 159 (222)
+|++.+++++ ++++++|+.+... +.| |+|++|||+..... .+.+.+ .
T Consensus 164 ~n~~~~~l~~~v~~~~~D~~~~~~------~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~ 237 (284)
T 1nv8_A 164 KNAERHGVSDRFFVRKGEFLEPFK------EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGR 237 (284)
T ss_dssp HHHHHTTCTTSEEEEESSTTGGGG------GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHH
T ss_pred HHHHHcCCCCceEEEECcchhhcc------cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHh
Confidence 9999999976 9999999988543 257 99999999653221 344444 4
Q ss_pred hCCCCcEEEEeeCccc
Q 043853 160 KLKAPRIVYVSCNPAT 175 (222)
Q Consensus 160 ~l~~~~~v~~~~~~~~ 175 (222)
.++++|.+++......
T Consensus 238 ~l~pgG~l~~e~~~~q 253 (284)
T 1nv8_A 238 YDTSGKIVLMEIGEDQ 253 (284)
T ss_dssp CCCTTCEEEEECCTTC
T ss_pred cCCCCCEEEEEECchH
Confidence 5789999998876643
No 17
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.75 E-value=2.1e-17 Score=151.28 Aligned_cols=176 Identities=19% Similarity=0.185 Sum_probs=126.9
Q ss_pred ceeeeecCeeEEEcCCc-----cccCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCC-eEEEEeCC
Q 043853 25 NITETLRGLTFQISANS-----FFQTNTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVK-HVYGYEVV 98 (222)
Q Consensus 25 ~~~~~~~~~~~~~~~~~-----f~~~~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~-~v~gvD~~ 98 (222)
.+...++|..|.++... +|...... .+++.... ++.+|||+|||+|.+++.++..+. +|+++|+|
T Consensus 501 ~~~v~E~g~~~~v~~~~~~~tG~f~d~r~~----r~~l~~~~-----~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s 571 (703)
T 3v97_A 501 FLEVTEYNAHLWVNLTDYLDTGLFLDHRIA----RRMLGQMS-----KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMS 571 (703)
T ss_dssp CEEEEETTEEEEECSSSSSSCSCCGGGHHH----HHHHHHHC-----TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESC
T ss_pred eEEEEECCEEEEEeccccccCCCcccHHHH----HHHHHHhc-----CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCC
Confidence 67788999999999753 44432221 23333332 378999999999999998887654 79999999
Q ss_pred HHHHHHHHHHHHHcCCC--cEEEEeCchhchhhhcCCCCCCCcEEEECCCCCCc-------------cHHHHH-HHHhCC
Q 043853 99 PQAISDACRNAKLNNIS--NATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGM-------------HMKLIK-FLLKLK 162 (222)
Q Consensus 99 ~~~i~~a~~n~~~~~~~--~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~~~-------------~~~~~~-~l~~l~ 162 (222)
+.+++.|++|++.|+++ +++++++|+.++.... .++||+|++|||.-.. ...++. ....++
T Consensus 572 ~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~---~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~Lk 648 (703)
T 3v97_A 572 RTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREA---NEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLR 648 (703)
T ss_dssp HHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHC---CCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEE
T ss_pred HHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhc---CCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999987 6999999999876542 2589999999994211 112232 334489
Q ss_pred CCcEEEEeeCccchHhhHHHhhccCCCCccCCCeEEeEeeee---ccCCCCCceeEEEEEE
Q 043853 163 APRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPV---DMFPHTPHIECVCLLE 220 (222)
Q Consensus 163 ~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---~~~p~~~~~~~v~~~~ 220 (222)
|+|+++++|+..++..+...+. +.+++...+... .-|+..+++...-.++
T Consensus 649 pgG~L~~s~~~~~~~~~~~~l~--------~~g~~~~~i~~~~lp~df~~~~~ih~~w~i~ 701 (703)
T 3v97_A 649 AGGTIMFSNNKRGFRMDLDGLA--------KLGLKAQEITQKTLSQDFARNRQIHNCWLIT 701 (703)
T ss_dssp EEEEEEEEECCTTCCCCHHHHH--------HTTEEEEECTTTTCCGGGTTCSSCCEEEEEE
T ss_pred CCcEEEEEECCcccccCHHHHH--------HcCCceeeeeeccCCCCCCCCCcceEEEEEe
Confidence 9999999999988888887775 567775554422 2265555555554443
No 18
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.75 E-value=1.6e-17 Score=130.23 Aligned_cols=139 Identities=20% Similarity=0.268 Sum_probs=102.1
Q ss_pred eecCeeEEEcCCc-cccCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcC-CeEEEEeCCHHHHHHHH
Q 043853 29 TLRGLTFQISANS-FFQTNTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWV-KHVYGYEVVPQAISDAC 106 (222)
Q Consensus 29 ~~~~~~~~~~~~~-f~~~~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~-~~v~gvD~~~~~i~~a~ 106 (222)
++.|..+..+.+. +.+......+.+.+++.... ++.+|||+|||+|.+++.++..+ .+|+|+|+|+.+++.|+
T Consensus 20 ~~~g~~l~~~~~~~~rp~~~~~~~~l~~~l~~~~-----~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~ 94 (202)
T 2fpo_A 20 QWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPVI-----VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLI 94 (202)
T ss_dssp GGTTCEEECCCC------CHHHHHHHHHHHHHHH-----TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHH
T ss_pred EEcCcEecCCCCCCCCCCHHHHHHHHHHHHHhhc-----CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHH
Confidence 4567778776643 33433344444444443321 36799999999999999766544 59999999999999999
Q ss_pred HHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCC-CCCccHHHHHHHHh---CCCCcEEEEeeCccc
Q 043853 107 RNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPN-RPGMHMKLIKFLLK---LKAPRIVYVSCNPAT 175 (222)
Q Consensus 107 ~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp-~~~~~~~~~~~l~~---l~~~~~v~~~~~~~~ 175 (222)
+|++.+++++++++++|+.++... ..+.||+|+++|| ..+....+++.+.. ++|+|++++++++..
T Consensus 95 ~~~~~~~~~~v~~~~~D~~~~~~~---~~~~fD~V~~~~p~~~~~~~~~l~~l~~~~~L~pgG~l~i~~~~~~ 164 (202)
T 2fpo_A 95 KNLATLKAGNARVVNSNAMSFLAQ---KGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEVEN 164 (202)
T ss_dssp HHHHHTTCCSEEEECSCHHHHHSS---CCCCEEEEEECCSSSTTTHHHHHHHHHHTTCEEEEEEEEEEEEGGG
T ss_pred HHHHHcCCCcEEEEECCHHHHHhh---cCCCCCEEEECCCCCCCcHHHHHHHHHhcCccCCCcEEEEEECCCc
Confidence 999999987899999999886432 2247999999999 44555677777765 899999999987643
No 19
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.75 E-value=1.5e-17 Score=125.97 Aligned_cols=142 Identities=16% Similarity=0.122 Sum_probs=108.1
Q ss_pred eecCeeEEEcCCccccCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHH
Q 043853 29 TLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRN 108 (222)
Q Consensus 29 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n 108 (222)
++++..+..+++ +.+......+.+.+++.... +++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.|++|
T Consensus 8 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~ 82 (171)
T 1ws6_A 8 KARGVALKVPAS-ARPSPVRLRKALFDYLRLRY----PRRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKEN 82 (171)
T ss_dssp GGTTCEECCCTT-CCCCCHHHHHHHHHHHHHHC----TTCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHH
T ss_pred ccCCeEecCCCC-CCCCHHHHHHHHHHHHHhhc----cCCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHH
Confidence 457888888888 66665556665555554321 1367999999999999999998888899999999999999999
Q ss_pred HHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCCCCCccHHHHHHHH---hCCCCcEEEEeeCccch
Q 043853 109 AKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLL---KLKAPRIVYVSCNPATC 176 (222)
Q Consensus 109 ~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~~~~~~~~~~l~---~l~~~~~v~~~~~~~~~ 176 (222)
++.+++ +++++++|+.+.........+.||+|+++||.......+.+.+. .++|+|.+++++.....
T Consensus 83 ~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~~ 152 (171)
T 1ws6_A 83 VRRTGL-GARVVALPVEVFLPEAKAQGERFTVAFMAPPYAMDLAALFGELLASGLVEAGGLYVLQHPKDLY 152 (171)
T ss_dssp HHHHTC-CCEEECSCHHHHHHHHHHTTCCEEEEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEEEEETTSC
T ss_pred HHHcCC-ceEEEeccHHHHHHhhhccCCceEEEEECCCCchhHHHHHHHHHhhcccCCCcEEEEEeCCccC
Confidence 999888 79999999988643322112379999999986444456666664 37899999988865433
No 20
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.74 E-value=1.9e-17 Score=129.68 Aligned_cols=140 Identities=19% Similarity=0.219 Sum_probs=100.3
Q ss_pred eecCeeEEEcCCc-cccCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcC-CeEEEEeCCHHHHHHHH
Q 043853 29 TLRGLTFQISANS-FFQTNTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWV-KHVYGYEVVPQAISDAC 106 (222)
Q Consensus 29 ~~~~~~~~~~~~~-f~~~~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~-~~v~gvD~~~~~i~~a~ 106 (222)
++.|..+..+++. +.+......+.+.+++.... ++.+|||+|||+|.+++.++..+ .+|+|+|+|+.+++.|+
T Consensus 19 ~~~g~~l~~~~~~~~rp~~~~~~~~l~~~l~~~~-----~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~ 93 (201)
T 2ift_A 19 LWRGRKLPVLNSEGLRPTGDRVKETLFNWLMPYI-----HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLK 93 (201)
T ss_dssp TTTTCEEECC---------CHHHHHHHHHHHHHH-----TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHH
T ss_pred eeCCcEecCCCCCCcCcCHHHHHHHHHHHHHHhc-----CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHH
Confidence 4667778776643 33333334444444443321 36799999999999999765544 59999999999999999
Q ss_pred HHHHHcCC--CcEEEEeCchhchhhhcCCCCCC-CcEEEECCC-CCCccHHHHHHHHh---CCCCcEEEEeeCccc
Q 043853 107 RNAKLNNI--SNATFVQGDLNKIGGDFGNAFPK-PDIVISDPN-RPGMHMKLIKFLLK---LKAPRIVYVSCNPAT 175 (222)
Q Consensus 107 ~n~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~-fD~ii~~pp-~~~~~~~~~~~l~~---l~~~~~v~~~~~~~~ 175 (222)
+|++.+++ ++++++++|+.++...+. .+. ||+|+++|| ..+....+++.+.. ++|+|.+++++++.+
T Consensus 94 ~~~~~~~~~~~~v~~~~~d~~~~~~~~~--~~~~fD~I~~~~~~~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 94 KNLQTLKCSSEQAEVINQSSLDFLKQPQ--NQPHFDVVFLDPPFHFNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp HHHHHTTCCTTTEEEECSCHHHHTTSCC--SSCCEEEEEECCCSSSCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred HHHHHhCCCccceEEEECCHHHHHHhhc--cCCCCCEEEECCCCCCccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 99999998 579999999988754321 247 999999999 33445667777743 789999999887755
No 21
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.73 E-value=7.2e-17 Score=132.21 Aligned_cols=146 Identities=20% Similarity=0.168 Sum_probs=111.4
Q ss_pred eeecCeeEEEcCCccccCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhc--CCeEEEEeCCHHHHHHH
Q 043853 28 ETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARW--VKHVYGYEVVPQAISDA 105 (222)
Q Consensus 28 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~--~~~v~gvD~~~~~i~~a 105 (222)
..+++..|.++++.|.+. +.++.+++.+.+.+. .++.+|||+|||+|.+++.+++. ..+++|+|+|+.+++.|
T Consensus 75 ~~f~~~~~~~~~~~~ipr--~~te~l~~~~l~~~~---~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a 149 (276)
T 2b3t_A 75 REFWSLPLFVSPATLIPR--PDTECLVEQALARLP---EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLA 149 (276)
T ss_dssp EEETTEEEECCTTSCCCC--TTHHHHHHHHHHHSC---SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHH
T ss_pred eEECCceEEeCCCCcccC--chHHHHHHHHHHhcc---cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHH
Confidence 467899999999999874 456777777777654 24679999999999999999865 45999999999999999
Q ss_pred HHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCCCCCc---------------------------cHHHHHHH
Q 043853 106 CRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGM---------------------------HMKLIKFL 158 (222)
Q Consensus 106 ~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~~~---------------------------~~~~~~~l 158 (222)
++|++.+++++++++++|+.+... .+.||+|+++||+... ...+++.+
T Consensus 150 ~~n~~~~~~~~v~~~~~d~~~~~~-----~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~ 224 (276)
T 2b3t_A 150 QRNAQHLAIKNIHILQSDWFSALA-----GQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQS 224 (276)
T ss_dssp HHHHHHHTCCSEEEECCSTTGGGT-----TCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHH
T ss_pred HHHHHHcCCCceEEEEcchhhhcc-----cCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHH
Confidence 999999998889999999987532 2479999999985432 13334444
Q ss_pred Hh-CCCCcEEEEeeCccchHhhHHHh
Q 043853 159 LK-LKAPRIVYVSCNPATCARDLDYL 183 (222)
Q Consensus 159 ~~-l~~~~~v~~~~~~~~~~~~~~~l 183 (222)
.. ++++|.+++.....+...-.+.+
T Consensus 225 ~~~LkpgG~l~~~~~~~~~~~~~~~l 250 (276)
T 2b3t_A 225 RNALVSGGFLLLEHGWQQGEAVRQAF 250 (276)
T ss_dssp GGGEEEEEEEEEECCSSCHHHHHHHH
T ss_pred HHhcCCCCEEEEEECchHHHHHHHHH
Confidence 33 78999998877654433333333
No 22
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.73 E-value=2.8e-16 Score=122.90 Aligned_cols=144 Identities=19% Similarity=0.184 Sum_probs=107.9
Q ss_pred ccCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcC-CeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEe
Q 043853 43 FQTNTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWV-KHVYGYEVVPQAISDACRNAKLNNISNATFVQ 121 (222)
Q Consensus 43 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~-~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~ 121 (222)
++.+....+.+...+... ...++.+|||+|||+|.++..+++.+ .+++|+|+|+.+++.|++|++.+++ ++++++
T Consensus 28 ~~~~~~~~~~l~~~~~~~---~~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~ 103 (207)
T 1wy7_A 28 YRTPGNAASELLWLAYSL---GDIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG-KFKVFI 103 (207)
T ss_dssp CCCCHHHHHHHHHHHHHT---TSSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT-SEEEEE
T ss_pred ecCchHHHHHHHHHHHHc---CCCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC-CEEEEE
Confidence 556677777766555432 12347899999999999999998875 4799999999999999999998888 799999
Q ss_pred CchhchhhhcCCCCCCCcEEEECCC----CCCccHHHHHHHHhCCCCcEEEEee--CccchHhhHHHhhccCCCCccCCC
Q 043853 122 GDLNKIGGDFGNAFPKPDIVISDPN----RPGMHMKLIKFLLKLKAPRIVYVSC--NPATCARDLDYLCHGVGDQNIKGC 195 (222)
Q Consensus 122 ~d~~~~~~~~~~~~~~fD~ii~~pp----~~~~~~~~~~~l~~l~~~~~v~~~~--~~~~~~~~~~~l~~~~~~~~~~~~ 195 (222)
+|+.+++ ..||+|++||| +.+....+++.+..+. +.+|+.| ++.+.....+.+. +.|
T Consensus 104 ~d~~~~~-------~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~~~~~~~~~~~~~~~l~--------~~g 166 (207)
T 1wy7_A 104 GDVSEFN-------SRVDIVIMNPPFGSQRKHADRPFLLKAFEIS--DVVYSIHLAKPEVRRFIEKFSW--------EHG 166 (207)
T ss_dssp SCGGGCC-------CCCSEEEECCCCSSSSTTTTHHHHHHHHHHC--SEEEEEEECCHHHHHHHHHHHH--------HTT
T ss_pred CchHHcC-------CCCCEEEEcCCCccccCCchHHHHHHHHHhc--CcEEEEEeCCcCCHHHHHHHHH--------HCC
Confidence 9998853 27999999999 3344556666665544 5677777 6655555555554 568
Q ss_pred eEEeEeeeeccC
Q 043853 196 YKLKSLQPVDMF 207 (222)
Q Consensus 196 ~~~~~~~~~~~~ 207 (222)
|++..+...++.
T Consensus 167 ~~~~~~~~~~~~ 178 (207)
T 1wy7_A 167 FVVTHRLTTKIE 178 (207)
T ss_dssp EEEEEEEEEEEE
T ss_pred CeEEEEEEEecC
Confidence 888877766543
No 23
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.73 E-value=6.6e-17 Score=138.77 Aligned_cols=148 Identities=19% Similarity=0.199 Sum_probs=107.5
Q ss_pred cCceEEEeCCC--ceeeeecCeeEEEcCCc-----cccCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHh
Q 043853 14 GEEEYTLYGKS--NITETLRGLTFQISANS-----FFQTNTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLA 86 (222)
Q Consensus 14 ~~~~~~~~g~~--~~~~~~~~~~~~~~~~~-----f~~~~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la 86 (222)
..+.+.++|+. .+...++|..|.++... +|...... ..++...+ .++.+|||+|||+|.+++.++
T Consensus 162 ~~~~~~l~G~~~~~~~v~E~g~~f~vd~~~~~~tG~f~dqr~~----r~~l~~~~----~~g~~VLDlg~GtG~~sl~~a 233 (393)
T 4dmg_A 162 PERVGVVYGEVPEVLEVEEDGLRFPIPLALAQKTGYYLDQREN----RRLFEAMV----RPGERVLDVYSYVGGFALRAA 233 (393)
T ss_dssp CCCCEEEEECCCSEEEEEETTEEEEEETTTCCTTSSCGGGHHH----HHHHHTTC----CTTCEEEEESCTTTHHHHHHH
T ss_pred CcccceEecCCCCcEEEEECCEEEEEechhccccCcCCCHHHH----HHHHHHHh----cCCCeEEEcccchhHHHHHHH
Confidence 34567888874 57788899999999654 55542222 22233322 247899999999999999999
Q ss_pred hcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCCCCC-----------ccHHHH
Q 043853 87 RWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPG-----------MHMKLI 155 (222)
Q Consensus 87 ~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~~-----------~~~~~~ 155 (222)
+.+..|+|+|+|+.+++.|++|++.++++ .++.++|+.++..... +.||+|++|||.-. ....++
T Consensus 234 ~~ga~V~avDis~~al~~a~~n~~~ng~~-~~~~~~D~~~~l~~~~---~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll 309 (393)
T 4dmg_A 234 RKGAYALAVDKDLEALGVLDQAALRLGLR-VDIRHGEALPTLRGLE---GPFHHVLLDPPTLVKRPEELPAMKRHLVDLV 309 (393)
T ss_dssp HTTCEEEEEESCHHHHHHHHHHHHHHTCC-CEEEESCHHHHHHTCC---CCEEEEEECCCCCCSSGGGHHHHHHHHHHHH
T ss_pred HcCCeEEEEECCHHHHHHHHHHHHHhCCC-CcEEEccHHHHHHHhc---CCCCEEEECCCcCCCCHHHHHHHHHHHHHHH
Confidence 88778999999999999999999999986 4577999998765432 24999999999521 112333
Q ss_pred HH-HHhCCCCcEEE-EeeCc
Q 043853 156 KF-LLKLKAPRIVY-VSCNP 173 (222)
Q Consensus 156 ~~-l~~l~~~~~v~-~~~~~ 173 (222)
.. ++.++|+|.++ .+|..
T Consensus 310 ~~a~~~LkpGG~Lv~~s~s~ 329 (393)
T 4dmg_A 310 REALRLLAEEGFLWLSSCSY 329 (393)
T ss_dssp HHHHHTEEEEEEEEEEECCT
T ss_pred HHHHHhcCCCCEEEEEECCC
Confidence 33 34478888876 55544
No 24
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.73 E-value=1.5e-17 Score=132.04 Aligned_cols=145 Identities=14% Similarity=0.085 Sum_probs=105.6
Q ss_pred CCCeEEEEecccchhHHHHhhcCC--eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEEC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVK--HVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISD 144 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~--~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~ 144 (222)
++.+|||+|||+|.+++.+|+..+ .++|+|+|+.+++.|++++..++++|++++++|+.++..... +.+.||.|+++
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~-~~~~~d~v~~~ 112 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMI-PDNSLRMVQLF 112 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHS-CTTCEEEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHc-CCCChheEEEe
Confidence 468999999999999999998654 799999999999999999999999899999999988643211 22579999887
Q ss_pred --CCCC--------CccHHHHHHHHh-CCCCcEEEEeeCccchHhhHHHhhccCCCCccCCCeEEeEeeeeccCCCCCce
Q 043853 145 --PNRP--------GMHMKLIKFLLK-LKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHI 213 (222)
Q Consensus 145 --pp~~--------~~~~~~~~~l~~-l~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 213 (222)
+|+. -....+++.+.+ |+|+|.+++.++..+....+..... -..+|+... ..+.|+.+++.
T Consensus 113 ~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~~~~~~~~~~~------~~~~~~~~~--~~~~~~~~~~~ 184 (218)
T 3dxy_A 113 FPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMS------SIDGYKNLS--ESNDYVPRPAS 184 (218)
T ss_dssp SCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHH------TSTTEEECC--TTSSCBCCCTT
T ss_pred CCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHH------hCCCccccc--CcCccCCCCCC
Confidence 3321 122356776654 8999999999998887777554332 023454433 34456666665
Q ss_pred eEEEEEE
Q 043853 214 ECVCLLE 220 (222)
Q Consensus 214 ~~v~~~~ 220 (222)
+.++.|+
T Consensus 185 ~~~t~fE 191 (218)
T 3dxy_A 185 RPVTKFE 191 (218)
T ss_dssp SCCCTTC
T ss_pred CCCcHHH
Confidence 5555443
No 25
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.72 E-value=4.6e-17 Score=131.98 Aligned_cols=157 Identities=17% Similarity=0.146 Sum_probs=112.6
Q ss_pred eecCeeEEEcCCccccCCHHHHHHH-HHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHH
Q 043853 29 TLRGLTFQISANSFFQTNTHQAEVL-YKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACR 107 (222)
Q Consensus 29 ~~~~~~~~~~~~~f~~~~~~~~~~~-~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~ 107 (222)
..++..+.++++.+|+++...+..+ .+++...+ .++.+|||+|||+|.+++.+++.+.+++|+|+|+.+++.|++
T Consensus 85 ~~~~~~~~l~p~~~fgtg~~~tt~~~~~~l~~~~----~~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~ 160 (254)
T 2nxc_A 85 EGAEIPLVIEPGMAFGTGHHETTRLALKALARHL----RPGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEA 160 (254)
T ss_dssp CSSSEEEECCCC-----CCSHHHHHHHHHHHHHC----CTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHH
T ss_pred CCCceEEEECCCccccCCCCHHHHHHHHHHHHhc----CCCCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHH
Confidence 3567788999998888777655544 34444332 247899999999999999998877799999999999999999
Q ss_pred HHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCCCCCccHHHHHHH-HhCCCCcEEEEeeCccchHhhHHHhhcc
Q 043853 108 NAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFL-LKLKAPRIVYVSCNPATCARDLDYLCHG 186 (222)
Q Consensus 108 n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~~~~~~~~~~l-~~l~~~~~v~~~~~~~~~~~~~~~l~~~ 186 (222)
|++.++++ +++.++|+.+.... ..||+|+++++...+ ..++..+ +.++|+|.++++........++...++
T Consensus 161 n~~~~~~~-v~~~~~d~~~~~~~-----~~fD~Vv~n~~~~~~-~~~l~~~~~~LkpgG~lils~~~~~~~~~v~~~l~- 232 (254)
T 2nxc_A 161 NAKRNGVR-PRFLEGSLEAALPF-----GPFDLLVANLYAELH-AALAPRYREALVPGGRALLTGILKDRAPLVREAMA- 232 (254)
T ss_dssp HHHHTTCC-CEEEESCHHHHGGG-----CCEEEEEEECCHHHH-HHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHHHHH-
T ss_pred HHHHcCCc-EEEEECChhhcCcC-----CCCCEEEECCcHHHH-HHHHHHHHHHcCCCCEEEEEeeccCCHHHHHHHHH-
Confidence 99999987 99999999874321 479999999864332 3444444 447999999987654444555554433
Q ss_pred CCCCccCCCeEEeEeee
Q 043853 187 VGDQNIKGCYKLKSLQP 203 (222)
Q Consensus 187 ~~~~~~~~~~~~~~~~~ 203 (222)
+.||++.....
T Consensus 233 ------~~Gf~~~~~~~ 243 (254)
T 2nxc_A 233 ------GAGFRPLEEAA 243 (254)
T ss_dssp ------HTTCEEEEEEE
T ss_pred ------HCCCEEEEEec
Confidence 56888877654
No 26
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.72 E-value=2.9e-16 Score=125.30 Aligned_cols=136 Identities=15% Similarity=0.072 Sum_probs=101.6
Q ss_pred CCCCeEEEEecccchhHHHHhhc---CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEE
Q 043853 66 DGSEIVLDLFCGTGTIGLTLARW---VKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVI 142 (222)
Q Consensus 66 ~~~~~vlDlg~G~G~~~~~la~~---~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii 142 (222)
.++.+|||+|||+|.++..+++. ..+++|+|+|+.+++.+.++++.+ ++++++++|+.+.... ....+.||+|+
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~--~~v~~~~~d~~~~~~~-~~~~~~~D~V~ 152 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR--TNIIPVIEDARHPHKY-RMLIAMVDVIF 152 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC--TTEEEECSCTTCGGGG-GGGCCCEEEEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc--CCeEEEEcccCChhhh-cccCCcEEEEE
Confidence 34789999999999999999876 259999999999999999888876 5799999999874310 00124799999
Q ss_pred ECCCCCCccHHHHH-HHHhCCCCcEEEEeeCccc----------hHhhHHHhhccCCCCccCCCeEEeEeeeeccCCCCC
Q 043853 143 SDPNRPGMHMKLIK-FLLKLKAPRIVYVSCNPAT----------CARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTP 211 (222)
Q Consensus 143 ~~pp~~~~~~~~~~-~l~~l~~~~~v~~~~~~~~----------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 211 (222)
++++.......++. ..+.++|+|.+++++.+.+ +.++++.+. +.||++.....++.||++.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~--------~~Gf~~~~~~~~~~~~~~~ 224 (233)
T 2ipx_A 153 ADVAQPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQ--------QENMKPQEQLTLEPYERDH 224 (233)
T ss_dssp ECCCCTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTG--------GGTEEEEEEEECTTTSSSE
T ss_pred EcCCCccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHH--------HCCCceEEEEecCCccCCc
Confidence 99984433334444 4556899999999886532 334444442 6799999988888888764
Q ss_pred c
Q 043853 212 H 212 (222)
Q Consensus 212 ~ 212 (222)
+
T Consensus 225 ~ 225 (233)
T 2ipx_A 225 A 225 (233)
T ss_dssp E
T ss_pred E
Confidence 3
No 27
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.72 E-value=2.3e-16 Score=125.35 Aligned_cols=171 Identities=19% Similarity=0.162 Sum_probs=114.1
Q ss_pred eeeecCeeEEEcCCccccCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEecc-cchhHHHHhhc-CCeEEEEeCCHHHHHH
Q 043853 27 TETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCG-TGTIGLTLARW-VKHVYGYEVVPQAISD 104 (222)
Q Consensus 27 ~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G-~G~~~~~la~~-~~~v~gvD~~~~~i~~ 104 (222)
..++++..|.+++..|.+. ..++.+. +... ..++.+|||+||| +|.+++.+++. ..+++|+|+|+.+++.
T Consensus 23 ~~~~~~~~~~~~~~~~~p~--~~~~~l~--~~~~----~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~ 94 (230)
T 3evz_A 23 AKALFGLDIEYHPKGLVTT--PISRYIF--LKTF----LRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEY 94 (230)
T ss_dssp HHHHHCCCCCCCTTSCCCC--HHHHHHH--HHTT----CCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHH
T ss_pred HHHhcCCceecCCCeEeCC--CchhhhH--hHhh----cCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHH
Confidence 3456788888888888863 3333221 1111 1347899999999 99999999887 7899999999999999
Q ss_pred HHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCCCCCc---------------------cHHHHHHHHh-CC
Q 043853 105 ACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGM---------------------HMKLIKFLLK-LK 162 (222)
Q Consensus 105 a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~~~---------------------~~~~~~~l~~-l~ 162 (222)
|++|++.+++ +++++++|+..+... . .+.||+|++|||.... ...+++.+.. ++
T Consensus 95 a~~~~~~~~~-~v~~~~~d~~~~~~~-~--~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk 170 (230)
T 3evz_A 95 ARRNIERNNS-NVRLVKSNGGIIKGV-V--EGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLN 170 (230)
T ss_dssp HHHHHHHTTC-CCEEEECSSCSSTTT-C--CSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEE
T ss_pred HHHHHHHhCC-CcEEEeCCchhhhhc-c--cCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhC
Confidence 9999999998 799999997543221 1 2589999999984321 1445555544 78
Q ss_pred CCcEEEEeeC--ccchHhhHHHhhccCCCCccCCCeEEeEeeeeccCCCCCceeEEEEEEe
Q 043853 163 APRIVYVSCN--PATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLLEL 221 (222)
Q Consensus 163 ~~~~v~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~~~~~ 221 (222)
|+|.+++.+. ........+.+. +.||.+..+... .......+.+|.|
T Consensus 171 pgG~l~~~~~~~~~~~~~~~~~l~--------~~g~~~~~~~~~----~g~~~~~~l~f~~ 219 (230)
T 3evz_A 171 PGGKVALYLPDKEKLLNVIKERGI--------KLGYSVKDIKFK----VGTRWRHSLIFFK 219 (230)
T ss_dssp EEEEEEEEEESCHHHHHHHHHHHH--------HTTCEEEEEEEC----CCC-CEEEEEEEC
T ss_pred CCeEEEEEecccHhHHHHHHHHHH--------HcCCceEEEEec----CCCeEEEEEEEec
Confidence 9999877542 222333334443 567877665442 2233444455544
No 28
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.71 E-value=3e-16 Score=123.12 Aligned_cols=133 Identities=16% Similarity=0.119 Sum_probs=99.2
Q ss_pred HHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEeCchhchhhhcCC
Q 043853 55 KLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNIS-NATFVQGDLNKIGGDFGN 133 (222)
Q Consensus 55 ~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~-~v~~~~~d~~~~~~~~~~ 133 (222)
..+...+... ++.+|||+|||+|.+++.+++.+.+|+|+|+|+.+++.|++|++.++++ +++++++|+.+.....
T Consensus 45 ~~~l~~l~~~--~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~-- 120 (204)
T 3njr_A 45 ALTLAALAPR--RGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADL-- 120 (204)
T ss_dssp HHHHHHHCCC--TTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTS--
T ss_pred HHHHHhcCCC--CCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccC--
Confidence 3344444433 4789999999999999999988889999999999999999999999998 7999999998854322
Q ss_pred CCCCCcEEEECCCCCCccHHHHHHHH-hCCCCcEEEEeeCc-cchHhhHHHhhccCCCCccCCCeEEeEeeee
Q 043853 134 AFPKPDIVISDPNRPGMHMKLIKFLL-KLKAPRIVYVSCNP-ATCARDLDYLCHGVGDQNIKGCYKLKSLQPV 204 (222)
Q Consensus 134 ~~~~fD~ii~~pp~~~~~~~~~~~l~-~l~~~~~v~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 204 (222)
+.||+|++++.. ...+++.+. .++|+|.+++++.. .+.......+. +.++++..+...
T Consensus 121 --~~~D~v~~~~~~---~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~--------~~g~~i~~i~~~ 180 (204)
T 3njr_A 121 --PLPEAVFIGGGG---SQALYDRLWEWLAPGTRIVANAVTLESETLLTQLHA--------RHGGQLLRIDIA 180 (204)
T ss_dssp --CCCSEEEECSCC---CHHHHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHH--------HHCSEEEEEEEE
T ss_pred --CCCCEEEECCcc---cHHHHHHHHHhcCCCcEEEEEecCcccHHHHHHHHH--------hCCCcEEEEEee
Confidence 379999998743 222555554 48999998887754 44444444443 445777665543
No 29
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.70 E-value=7.1e-16 Score=118.54 Aligned_cols=133 Identities=17% Similarity=0.153 Sum_probs=92.8
Q ss_pred CCCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECC
Q 043853 66 DGSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDP 145 (222)
Q Consensus 66 ~~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~p 145 (222)
.++.+|||+|||+|.+++.+++.+.+|+|+|+|+.+++.|+++++.+++++++++++|...+.... .+.||+|++++
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~---~~~fD~v~~~~ 97 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYV---REPIRAAIFNL 97 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTC---CSCEEEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhc---cCCcCEEEEeC
Confidence 457899999999999999999888899999999999999999999999888999998887754322 24799999985
Q ss_pred CCCC--------cc---HHHHHHH-HhCCCCcEEEEeeCccc-----hHhhHHHhhccCCCCccCCCeEEeEeeeec
Q 043853 146 NRPG--------MH---MKLIKFL-LKLKAPRIVYVSCNPAT-----CARDLDYLCHGVGDQNIKGCYKLKSLQPVD 205 (222)
Q Consensus 146 p~~~--------~~---~~~~~~l-~~l~~~~~v~~~~~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 205 (222)
+.-. .. ..+++.+ +.++|+|.+++.+.... ....+..+.... -..+|++.......
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~~~~~~~ 170 (185)
T 3mti_A 98 GYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGL----DQRVFTAMLYQPLN 170 (185)
T ss_dssp C-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHS----CTTTEEEEEEEESS
T ss_pred CCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhC----CCceEEEEEehhhc
Confidence 3211 11 1233333 45899999887764311 112222222111 14578888877655
No 30
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.70 E-value=2.4e-16 Score=124.20 Aligned_cols=128 Identities=12% Similarity=0.033 Sum_probs=99.0
Q ss_pred CCCeEEEEecccchhHHHHhhcC--CeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEEC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWV--KHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISD 144 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~--~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~ 144 (222)
++.+|||+|||+|.+++.+++.. .+++|+|+|+.+++.|++++..+++++++++++|+.++...+. .+.||+|+++
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~--~~~~D~i~~~ 118 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFE--DGEIDRLYLN 118 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSC--TTCCSEEEEE
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcC--CCCCCEEEEE
Confidence 46899999999999999998874 5999999999999999999999998889999999988553222 2479999999
Q ss_pred CCCCC----------ccHHHHHHHHh-CCCCcEEEEeeCccchHhhHHHhhccCCCCccCCCeEEeEeee
Q 043853 145 PNRPG----------MHMKLIKFLLK-LKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQP 203 (222)
Q Consensus 145 pp~~~----------~~~~~~~~l~~-l~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 203 (222)
+|... ....+++.+.. ++++|.+++.++......++..... +.||+......
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~-------~~g~~~~~~~~ 181 (214)
T 1yzh_A 119 FSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFS-------QYGMKLNGVWL 181 (214)
T ss_dssp SCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHH-------HHTCEEEEEES
T ss_pred CCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHH-------HCCCeeeeccc
Confidence 87432 23567776654 8999999999877555555443322 45787766553
No 31
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.70 E-value=8.9e-16 Score=119.95 Aligned_cols=119 Identities=16% Similarity=0.193 Sum_probs=91.9
Q ss_pred HHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcC--CeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcC
Q 043853 55 KLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWV--KHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFG 132 (222)
Q Consensus 55 ~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~--~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~ 132 (222)
..+...+... ++.+|||+|||+|.+++.+++.+ .+++|+|+|+.+++.|++|++.+++++++++++|+.+.....
T Consensus 30 ~~~l~~l~~~--~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~- 106 (204)
T 3e05_A 30 AVTLSKLRLQ--DDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDL- 106 (204)
T ss_dssp HHHHHHTTCC--TTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTS-
T ss_pred HHHHHHcCCC--CCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcC-
Confidence 3444444433 47899999999999999999876 699999999999999999999999878999999997654422
Q ss_pred CCCCCCcEEEECCCCCCccHHHHHHH-HhCCCCcEEEEeeCccchHhhH
Q 043853 133 NAFPKPDIVISDPNRPGMHMKLIKFL-LKLKAPRIVYVSCNPATCARDL 180 (222)
Q Consensus 133 ~~~~~fD~ii~~pp~~~~~~~~~~~l-~~l~~~~~v~~~~~~~~~~~~~ 180 (222)
+.||+|+++.+.... ..+++.+ +.++|+|.+++.+........+
T Consensus 107 ---~~~D~i~~~~~~~~~-~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~ 151 (204)
T 3e05_A 107 ---PDPDRVFIGGSGGML-EEIIDAVDRRLKSEGVIVLNAVTLDTLTKA 151 (204)
T ss_dssp ---CCCSEEEESCCTTCH-HHHHHHHHHHCCTTCEEEEEECBHHHHHHH
T ss_pred ---CCCCEEEECCCCcCH-HHHHHHHHHhcCCCeEEEEEecccccHHHH
Confidence 479999999875544 4555554 4589999999887654333333
No 32
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.69 E-value=6.1e-16 Score=132.32 Aligned_cols=166 Identities=18% Similarity=0.207 Sum_probs=117.4
Q ss_pred CeeEEEcCCccccCCHH-HHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHH
Q 043853 32 GLTFQISANSFFQTNTH-QAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAK 110 (222)
Q Consensus 32 ~~~~~~~~~~f~~~~~~-~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~ 110 (222)
+..|...++.|++.+.. .++.+.+.+...+.....++.+|||+|||+|.+++.+++.+.+|+++|+|+.+++.|++|++
T Consensus 197 ~~~~~~~pgvFs~~~~d~~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n~~ 276 (381)
T 3dmg_A 197 EYTFHHLPGVFSAGKVDPASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGLE 276 (381)
T ss_dssp EEEEEECTTCTTTTSCCHHHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHHHH
T ss_pred eEEEEeCCCceeCCCCCHHHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHH
Confidence 34677789999876543 55666676666553222346799999999999999999888899999999999999999999
Q ss_pred HcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCCCCC-------ccHHHHHHH-HhCCCCcEEEEeeCccchH-hhHH
Q 043853 111 LNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPG-------MHMKLIKFL-LKLKAPRIVYVSCNPATCA-RDLD 181 (222)
Q Consensus 111 ~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~~-------~~~~~~~~l-~~l~~~~~v~~~~~~~~~~-~~~~ 181 (222)
.++++ ++++++|+.+.... .+.||+|++|||... ....+++.+ +.++++|.+++.+++.... ..+.
T Consensus 277 ~~~~~-v~~~~~D~~~~~~~----~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~~~~l~ 351 (381)
T 3dmg_A 277 ANALK-AQALHSDVDEALTE----EARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFLKYEPLLE 351 (381)
T ss_dssp HTTCC-CEEEECSTTTTSCT----TCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTSCHHHHHH
T ss_pred HcCCC-eEEEEcchhhcccc----CCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCCChHHHHH
Confidence 99875 89999999886542 258999999998542 123444443 3489999999988764322 2233
Q ss_pred HhhccCCCCccCCCeEEeEeee
Q 043853 182 YLCHGVGDQNIKGCYKLKSLQP 203 (222)
Q Consensus 182 ~l~~~~~~~~~~~~~~~~~~~~ 203 (222)
......... -..+|++.....
T Consensus 352 ~~f~~v~~l-~~~gF~Vl~a~~ 372 (381)
T 3dmg_A 352 EKFGAFQTL-KVAEYKVLFAEK 372 (381)
T ss_dssp HHHSCCEEE-EESSSEEEEEEC
T ss_pred HhhccEEEE-eCCCEEEEEEEE
Confidence 322211111 245777766544
No 33
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.69 E-value=8.4e-16 Score=122.53 Aligned_cols=130 Identities=22% Similarity=0.195 Sum_probs=95.5
Q ss_pred CCCeEEEEecccchhHHHHhhcC--CeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEEC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWV--KHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISD 144 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~--~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~ 144 (222)
++.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.|+++++.+ ++++++.+|+.+........ ..||+|+.+
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~v~~~~~d~~~~~~~~~~~-~~~D~v~~~ 150 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER--ENIIPILGDANKPQEYANIV-EKVDVIYED 150 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC--TTEEEEECCTTCGGGGTTTS-CCEEEEEEC
T ss_pred CCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC--CCeEEEECCCCCcccccccC-ccEEEEEEe
Confidence 57899999999999999998864 69999999999999999998765 57999999997732111111 479999998
Q ss_pred CCCCCccHHHHHHHH-hCCCCcEEEEe----eCccc------hHhhHHHhhccCCCCccCCCeEEeEeeeeccC
Q 043853 145 PNRPGMHMKLIKFLL-KLKAPRIVYVS----CNPAT------CARDLDYLCHGVGDQNIKGCYKLKSLQPVDMF 207 (222)
Q Consensus 145 pp~~~~~~~~~~~l~-~l~~~~~v~~~----~~~~~------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 207 (222)
++..+....+++.+. .++|+|.+++. +.+.+ ..+++..+. +.||++.....++.+
T Consensus 151 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~~l~--------~~Gf~~~~~~~~~~~ 216 (230)
T 1fbn_A 151 VAQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKEILE--------AGGFKIVDEVDIEPF 216 (230)
T ss_dssp CCSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHHHHH--------HHTEEEEEEEECTTT
T ss_pred cCChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHHHHH--------HCCCEEEEEEccCCC
Confidence 876555566566554 58999999884 33322 235555443 568988887765544
No 34
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.69 E-value=5.4e-16 Score=121.19 Aligned_cols=156 Identities=15% Similarity=0.128 Sum_probs=109.1
Q ss_pred ecCeeEEEcCCc-cccCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCC-eEEEEeCCHHHHHHHHH
Q 043853 30 LRGLTFQISANS-FFQTNTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVK-HVYGYEVVPQAISDACR 107 (222)
Q Consensus 30 ~~~~~~~~~~~~-f~~~~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~-~v~gvD~~~~~i~~a~~ 107 (222)
..+..+.++++. |.....+....+.+++...+ .++.+|||+|||+|.++..+++... +++|+|+|+.+++.|++
T Consensus 26 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~l~~~~----~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~ 101 (205)
T 3grz_A 26 KDQEIIRLDPGLAFGTGNHQTTQLAMLGIERAM----VKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEE 101 (205)
T ss_dssp TTCEEEEESCC-----CCHHHHHHHHHHHHHHC----SSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred CCceeEEecCCcccCCCCCccHHHHHHHHHHhc----cCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHH
Confidence 345677788775 44444445555566665543 2468999999999999999887644 99999999999999999
Q ss_pred HHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCCCCCccHHHHHHHH-hCCCCcEEEEeeCccchHhhHHHhhcc
Q 043853 108 NAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLL-KLKAPRIVYVSCNPATCARDLDYLCHG 186 (222)
Q Consensus 108 n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~~~~~~~~~~l~-~l~~~~~v~~~~~~~~~~~~~~~l~~~ 186 (222)
++..++.+++++.++|+.+... +.||+|+++++...+ ..+++.+. .++++|.+++++.......++..+..
T Consensus 102 ~~~~~~~~~v~~~~~d~~~~~~------~~fD~i~~~~~~~~~-~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~- 173 (205)
T 3grz_A 102 NAALNGIYDIALQKTSLLADVD------GKFDLIVANILAEIL-LDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALA- 173 (205)
T ss_dssp HHHHTTCCCCEEEESSTTTTCC------SCEEEEEEESCHHHH-HHHGGGSGGGEEEEEEEEEEEEEGGGHHHHHHHHH-
T ss_pred HHHHcCCCceEEEeccccccCC------CCceEEEECCcHHHH-HHHHHHHHHhcCCCCEEEEEecCcccHHHHHHHHH-
Confidence 9999998779999999977532 489999999874322 23333332 37899998887544444444444433
Q ss_pred CCCCccCCCeEEeEeee
Q 043853 187 VGDQNIKGCYKLKSLQP 203 (222)
Q Consensus 187 ~~~~~~~~~~~~~~~~~ 203 (222)
+.||++.....
T Consensus 174 ------~~Gf~~~~~~~ 184 (205)
T 3grz_A 174 ------ENSFQIDLKMR 184 (205)
T ss_dssp ------HTTEEEEEEEE
T ss_pred ------HcCCceEEeec
Confidence 56787776543
No 35
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.68 E-value=3.8e-16 Score=133.61 Aligned_cols=142 Identities=18% Similarity=0.149 Sum_probs=109.1
Q ss_pred eeeecCeeEEEc---------CCccccCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhc--C-CeEEE
Q 043853 27 TETLRGLTFQIS---------ANSFFQTNTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARW--V-KHVYG 94 (222)
Q Consensus 27 ~~~~~~~~~~~~---------~~~f~~~~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~--~-~~v~g 94 (222)
..+++|..|.++ .++||+++......+...+.........++.+|||+|||+|.+++.++.. + .+|++
T Consensus 3 ~i~E~g~~~~v~~~~~~~~~~~~~Ffn~~~~~nR~l~~~~~~~~~~~~~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~a 82 (392)
T 3axs_A 3 IVQEGIAKIIVPEIPKTVSSDMPVFYNPRMRVNRDLAVLGLEYLCKKLGRPVKVADPLSASGIRAIRFLLETSCVEKAYA 82 (392)
T ss_dssp EEEETTEEEEECCCCSSCCTTCCSSCCGGGHHHHHHHHHHHHHHHHHHCSCEEEEESSCTTSHHHHHHHHHCSCEEEEEE
T ss_pred EEEECCEEEEEecccccccCCCCEEEcCCcHHHHHHHHHHHHHHhhccCCCCEEEECCCcccHHHHHHHHhCCCCCEEEE
Confidence 467889999985 36899877777766654443333210023689999999999999988874 3 58999
Q ss_pred EeCCHHHHHHHHHHHHHcCCCc--EEEEeCchhchhh-hcCCCCCCCcEEEECCCCCCccHHHHHHH-HhCCCCcEEEEe
Q 043853 95 YEVVPQAISDACRNAKLNNISN--ATFVQGDLNKIGG-DFGNAFPKPDIVISDPNRPGMHMKLIKFL-LKLKAPRIVYVS 170 (222)
Q Consensus 95 vD~~~~~i~~a~~n~~~~~~~~--v~~~~~d~~~~~~-~~~~~~~~fD~ii~~pp~~~~~~~~~~~l-~~l~~~~~v~~~ 170 (222)
+|+++.+++.+++|++.|++++ ++++++|+.++.. .+. ..||+|++||+ +....+++.+ ..++++|++|++
T Consensus 83 vDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~---~~fD~V~lDP~--g~~~~~l~~a~~~Lk~gGll~~t 157 (392)
T 3axs_A 83 NDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWG---FGFDYVDLDPF--GTPVPFIESVALSMKRGGILSLT 157 (392)
T ss_dssp ECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCS---SCEEEEEECCS--SCCHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhC---CCCcEEEECCC--cCHHHHHHHHHHHhCCCCEEEEE
Confidence 9999999999999999999976 9999999988865 432 47999999995 3234566644 448999999999
Q ss_pred eCc
Q 043853 171 CNP 173 (222)
Q Consensus 171 ~~~ 173 (222)
|..
T Consensus 158 ~t~ 160 (392)
T 3axs_A 158 ATD 160 (392)
T ss_dssp ECC
T ss_pred ecc
Confidence 843
No 36
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.67 E-value=1.9e-15 Score=122.81 Aligned_cols=145 Identities=15% Similarity=0.107 Sum_probs=102.7
Q ss_pred CCCeEEEEecccchhHHHHhhcC--CeEEEEeCCHHHHHHHHHHHHH---cCCCc-EEEEeCchhchhhhc---CCCCCC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWV--KHVYGYEVVPQAISDACRNAKL---NNISN-ATFVQGDLNKIGGDF---GNAFPK 137 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~--~~v~gvD~~~~~i~~a~~n~~~---~~~~~-v~~~~~d~~~~~~~~---~~~~~~ 137 (222)
++.+|||+|||+|.+++.+++.. .+++|+|+++.+++.|++|+.. +++++ ++++++|+.++.... .-....
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 115 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEH 115 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTC
T ss_pred CCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCC
Confidence 46799999999999999998875 4999999999999999999998 88864 999999998873211 001247
Q ss_pred CcEEEECCCCCCc--------------------cHHHHHHHH-hCCCCcEEEEeeCccchHhhHHHhhccCCCCccCCCe
Q 043853 138 PDIVISDPNRPGM--------------------HMKLIKFLL-KLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCY 196 (222)
Q Consensus 138 fD~ii~~pp~~~~--------------------~~~~~~~l~-~l~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 196 (222)
||+|++|||+... ...+++.+. .++++|.+++...+.....-+..+. + .|
T Consensus 116 fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~--------~-~~ 186 (260)
T 2ozv_A 116 FHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQSVAEIIAACG--------S-RF 186 (260)
T ss_dssp EEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGGGHHHHHHHHT--------T-TE
T ss_pred cCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHHHHHHHHHHHH--------h-cC
Confidence 9999999995422 234444443 4799999988877765554445442 3 37
Q ss_pred EEeEeeeeccCCCCCceeEEEEEE
Q 043853 197 KLKSLQPVDMFPHTPHIECVCLLE 220 (222)
Q Consensus 197 ~~~~~~~~~~~p~~~~~~~v~~~~ 220 (222)
....+.++.-.+..+..-.+..+.
T Consensus 187 ~~~~i~~v~~~~~~~~~~~lv~~~ 210 (260)
T 2ozv_A 187 GGLEITLIHPRPGEDAVRMLVTAI 210 (260)
T ss_dssp EEEEEEEEESSTTSCCCEEEEEEE
T ss_pred CceEEEEEcCCCCCCceEEEEEEE
Confidence 666666655555555444444443
No 37
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.67 E-value=1.2e-15 Score=130.34 Aligned_cols=137 Identities=19% Similarity=0.196 Sum_probs=108.8
Q ss_pred eeeeecCeeEEEcC-------CccccCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhc--CCeEEEEe
Q 043853 26 ITETLRGLTFQISA-------NSFFQTNTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARW--VKHVYGYE 96 (222)
Q Consensus 26 ~~~~~~~~~~~~~~-------~~f~~~~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~--~~~v~gvD 96 (222)
...++++..|.++. ..||++.......+...+.... ++.+|||+|||+|.+++.++.. ..+|+++|
T Consensus 4 ~~~~Eg~~~~~~p~~~~~~~~~~F~np~~~~nr~l~~~~l~~~-----~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avD 78 (378)
T 2dul_A 4 IEVQEGKAKILIPKAESIYDSPVFYNPRMALNRDIVVVLLNIL-----NPKIVLDALSATGIRGIRFALETPAEEVWLND 78 (378)
T ss_dssp EEEEETTEEEEEC--------CCCCCGGGHHHHHHHHHHHHHH-----CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEE
T ss_pred eEEEeCcEEEEecCccccCCCCceeCCchHHHHHHHHHHHHHc-----CCCEEEECCCchhHHHHHHHHhCCCCeEEEEE
Confidence 45678899999875 6899877776666544444443 3789999999999999998875 34899999
Q ss_pred CCHHHHHHHHHHHHHc---------------CCCcEEEEeCchhchhhhcCCCCCCCcEEEECCCCCCccHHHHHH-HHh
Q 043853 97 VVPQAISDACRNAKLN---------------NISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKF-LLK 160 (222)
Q Consensus 97 ~~~~~i~~a~~n~~~~---------------~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~~~~~~~~~~-l~~ 160 (222)
+|+.+++.+++|++.+ ++++++++++|+.++..... ..||+|++|||.. ...+++. +..
T Consensus 79 i~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~~~~---~~fD~I~lDP~~~--~~~~l~~a~~~ 153 (378)
T 2dul_A 79 ISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAERH---RYFHFIDLDPFGS--PMEFLDTALRS 153 (378)
T ss_dssp SCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHHST---TCEEEEEECCSSC--CHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHHhcc---CCCCEEEeCCCCC--HHHHHHHHHHh
Confidence 9999999999999999 88779999999988865431 4799999999843 3566664 455
Q ss_pred CCCCcEEEEeeC
Q 043853 161 LKAPRIVYVSCN 172 (222)
Q Consensus 161 l~~~~~v~~~~~ 172 (222)
++++|++|++|.
T Consensus 154 lk~gG~l~vt~t 165 (378)
T 2dul_A 154 AKRRGILGVTAT 165 (378)
T ss_dssp EEEEEEEEEEEC
T ss_pred cCCCCEEEEEee
Confidence 899999999884
No 38
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.67 E-value=2.2e-15 Score=115.84 Aligned_cols=143 Identities=25% Similarity=0.317 Sum_probs=104.8
Q ss_pred ceeeeecCeeEEEc-CCccccCCH--HHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHH
Q 043853 25 NITETLRGLTFQIS-ANSFFQTNT--HQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQA 101 (222)
Q Consensus 25 ~~~~~~~~~~~~~~-~~~f~~~~~--~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~ 101 (222)
.+...+.+..+.+. ..++++++. ...+. +.+.+... ++.+|||+|||+|.++..+++.+.+++|+|+|+.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~~~~--~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~ 86 (194)
T 1dus_A 13 IVEDILRGKKLKFKTDSGVFSYGKVDKGTKI----LVENVVVD--KDDDILDLGCGYGVIGIALADEVKSTTMADINRRA 86 (194)
T ss_dssp EEEEEETTEEEEEEEETTSTTTTSCCHHHHH----HHHHCCCC--TTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHH
T ss_pred EEeeecCCCceEEEeCCCcCCccccchHHHH----HHHHcccC--CCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHH
Confidence 45667788888774 445555432 33333 34444333 47899999999999999998887799999999999
Q ss_pred HHHHHHHHHHcCCCc--EEEEeCchhchhhhcCCCCCCCcEEEECCCCCC---ccHHHHHHHH-hCCCCcEEEEeeCccc
Q 043853 102 ISDACRNAKLNNISN--ATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPG---MHMKLIKFLL-KLKAPRIVYVSCNPAT 175 (222)
Q Consensus 102 i~~a~~n~~~~~~~~--v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~~---~~~~~~~~l~-~l~~~~~v~~~~~~~~ 175 (222)
++.|++++..+++++ ++++.+|+.+... .+.||+|++++|... ....+++.+. .++++|.+++.+....
T Consensus 87 ~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 161 (194)
T 1dus_A 87 IKLAKENIKLNNLDNYDIRVVHSDLYENVK-----DRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTKQ 161 (194)
T ss_dssp HHHHHHHHHHTTCTTSCEEEEECSTTTTCT-----TSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEESTH
T ss_pred HHHHHHHHHHcCCCccceEEEECchhcccc-----cCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 999999999999887 9999999987543 247999999998542 1234444443 3789999888776544
Q ss_pred hHh
Q 043853 176 CAR 178 (222)
Q Consensus 176 ~~~ 178 (222)
...
T Consensus 162 ~~~ 164 (194)
T 1dus_A 162 GAK 164 (194)
T ss_dssp HHH
T ss_pred ChH
Confidence 444
No 39
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.66 E-value=1.8e-16 Score=121.76 Aligned_cols=142 Identities=13% Similarity=0.116 Sum_probs=100.6
Q ss_pred eeecCeeEEEcCCccccCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcC-CeEEEEeCCHHHHHHHH
Q 043853 28 ETLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWV-KHVYGYEVVPQAISDAC 106 (222)
Q Consensus 28 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~-~~v~gvD~~~~~i~~a~ 106 (222)
.++++..+.++++....+ ..+.+.+.+.+.+... .++.+|||+|||+|.+++.+++.. .+++|+|+|+.+++.|+
T Consensus 9 g~~~~~~~~~~~~~~~rp---~~~~~~~~~~~~l~~~-~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~ 84 (187)
T 2fhp_A 9 GEYGGRRLKALDGDNTRP---TTDKVKESIFNMIGPY-FDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIK 84 (187)
T ss_dssp STTTTCBCCCCCCCSSCC---CCHHHHHHHHHHHCSC-CSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHH
T ss_pred ccccCccccCCCCCCcCc---CHHHHHHHHHHHHHhh-cCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHH
Confidence 355677777776543222 2233344444444211 246799999999999999877654 59999999999999999
Q ss_pred HHHHHcCCC-cEEEEeCchhchhhhcCCCCCCCcEEEECCCCC-CccHHHHHHH--H-hCCCCcEEEEeeCc
Q 043853 107 RNAKLNNIS-NATFVQGDLNKIGGDFGNAFPKPDIVISDPNRP-GMHMKLIKFL--L-KLKAPRIVYVSCNP 173 (222)
Q Consensus 107 ~n~~~~~~~-~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~-~~~~~~~~~l--~-~l~~~~~v~~~~~~ 173 (222)
+|+..++++ +++++++|+.+....+....+.||+|+++||.. ......+..+ . .++|+|++++++..
T Consensus 85 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 85 ENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDPPYAKQEIVSQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp HHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCGGGCCHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred HHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEECCCCCchhHHHHHHHHHHhcccCCCCEEEEEeCC
Confidence 999999874 699999999886542211125799999999932 3445666665 2 26899999887654
No 40
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.66 E-value=1.6e-16 Score=124.42 Aligned_cols=108 Identities=17% Similarity=0.122 Sum_probs=66.5
Q ss_pred EEcCCccccCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcC--CeEEEEeCCHHHHHHHHHHHHHcC
Q 043853 36 QISANSFFQTNTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWV--KHVYGYEVVPQAISDACRNAKLNN 113 (222)
Q Consensus 36 ~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~--~~v~gvD~~~~~i~~a~~n~~~~~ 113 (222)
.++++.|.+. +.++.+.+++.+.+... .++.+|||+|||+|.++..+++.. .+++|+|+|+.+++.|++|+..++
T Consensus 2 ~~~~~~~~p~--~~~~~~~~~~~~~l~~~-~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~ 78 (215)
T 4dzr_A 2 EVGPDCLIPR--PDTEVLVEEAIRFLKRM-PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFG 78 (215)
T ss_dssp BCSGGGGSCC--HHHHHHHHHHHHHHTTC-CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC---------------
T ss_pred cCCCCccCCC--ccHHHHHHHHHHHhhhc-CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhC
Confidence 3456666653 56677788887776431 247899999999999999999874 399999999999999999999888
Q ss_pred CCcEEEEeCchhchhhhcCCCCCCCcEEEECCCC
Q 043853 114 ISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNR 147 (222)
Q Consensus 114 ~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~ 147 (222)
. +++++++|+.+.........+.||+|++|||.
T Consensus 79 ~-~~~~~~~d~~~~~~~~~~~~~~fD~i~~npp~ 111 (215)
T 4dzr_A 79 A-VVDWAAADGIEWLIERAERGRPWHAIVSNPPY 111 (215)
T ss_dssp -----CCHHHHHHHHHHHHHTTCCBSEEEECCCC
T ss_pred C-ceEEEEcchHhhhhhhhhccCcccEEEECCCC
Confidence 7 79999999988443210112479999999984
No 41
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.65 E-value=9.1e-15 Score=115.24 Aligned_cols=162 Identities=14% Similarity=0.149 Sum_probs=113.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcC--CeEEEEeCCHHHHHHHHHHHHHcCCC-----cEEEE
Q 043853 48 HQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWV--KHVYGYEVVPQAISDACRNAKLNNIS-----NATFV 120 (222)
Q Consensus 48 ~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~--~~v~gvD~~~~~i~~a~~n~~~~~~~-----~v~~~ 120 (222)
+..+...+++.+.+... ++.+|||+|||+|.++..+++.+ .+++|+|+|+.+++.|++++..++++ +++++
T Consensus 12 ~~~~~~~~~l~~~l~~~--~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~ 89 (219)
T 3jwg_A 12 NLNQQRLGTVVAVLKSV--NAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLF 89 (219)
T ss_dssp CHHHHHHHHHHHHHHHT--TCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEE
T ss_pred cchHHHHHHHHHHHhhc--CCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEE
Confidence 45555566666665433 36799999999999999999865 49999999999999999999877764 69999
Q ss_pred eCchhchhhhcCCCCCCCcEEEECCCCCCcc----HHHHHHHHh-CCCCcEEEEeeCccc--------------------
Q 043853 121 QGDLNKIGGDFGNAFPKPDIVISDPNRPGMH----MKLIKFLLK-LKAPRIVYVSCNPAT-------------------- 175 (222)
Q Consensus 121 ~~d~~~~~~~~~~~~~~fD~ii~~pp~~~~~----~~~~~~l~~-l~~~~~v~~~~~~~~-------------------- 175 (222)
++|+...... .+.||+|++.....-+. ..+++.+.+ ++|+|+++...+...
T Consensus 90 ~~d~~~~~~~----~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (219)
T 3jwg_A 90 QSSLVYRDKR----FSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFE 165 (219)
T ss_dssp ECCSSSCCGG----GTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTS
T ss_pred eCcccccccc----cCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceee
Confidence 9998654432 24799999875422111 345555544 789986665443211
Q ss_pred -hHhhHH----HhhccCCCCccCCCeEEeEeeeeccCCCCCceeEEEEEEeC
Q 043853 176 -CARDLD----YLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLLELS 222 (222)
Q Consensus 176 -~~~~~~----~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~~~~~~ 222 (222)
...++. .+++ ..||++.....-+..|.......++++.|+
T Consensus 166 ~~~~~l~~~~~~l~~-------~~Gf~v~~~~~g~~~~~~g~~~qi~~~~~~ 210 (219)
T 3jwg_A 166 WTRKEFQTWAVKVAE-------KYGYSVRFLQIGEIDDEFGSPTQMGVFTLG 210 (219)
T ss_dssp BCHHHHHHHHHHHHH-------HHTEEEEEEEESCCCTTSCCSEEEEEEEEC
T ss_pred ecHHHHHHHHHHHHH-------HCCcEEEEEecCCccccCCCCeEEEEEecc
Confidence 111122 3332 568998888777777777788888888774
No 42
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.65 E-value=4.4e-16 Score=130.08 Aligned_cols=167 Identities=18% Similarity=0.112 Sum_probs=119.9
Q ss_pred CeeE-EEcCCccccCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCC---eEEEEeCCHHHHHHHHH
Q 043853 32 GLTF-QISANSFFQTNTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVK---HVYGYEVVPQAISDACR 107 (222)
Q Consensus 32 ~~~~-~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~---~v~gvD~~~~~i~~a~~ 107 (222)
+... .+..++|+|.+. .+.+...+.+.+... ++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|++
T Consensus 43 ~~~~~~l~~~~f~q~~~--~~~~~~~l~~~l~~~--~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~ 118 (317)
T 1dl5_A 43 DIVLVSYDDGEEYSTSS--QPSLMALFMEWVGLD--KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKR 118 (317)
T ss_dssp SSCEEEEECSSCEEEEC--CHHHHHHHHHHTTCC--TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHH
T ss_pred CCCcccccCCCcceecc--CHHHHHHHHHhcCCC--CcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHH
Confidence 4445 667777776532 233344555555443 478999999999999999987654 49999999999999999
Q ss_pred HHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCCCCCccHHHHHHHHhCCCCcEEEEeeCccc-hHhhHHHhhcc
Q 043853 108 NAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPAT-CARDLDYLCHG 186 (222)
Q Consensus 108 n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~~~~~~~~~~l~~l~~~~~v~~~~~~~~-~~~~~~~l~~~ 186 (222)
+++.++++++++..+|+.+.... .+.||+|+++++...+...+ ...++|+|.+++++.+.. ....+..+.+
T Consensus 119 ~~~~~g~~~v~~~~~d~~~~~~~----~~~fD~Iv~~~~~~~~~~~~---~~~LkpgG~lvi~~~~~~~~~~~~~~~~~- 190 (317)
T 1dl5_A 119 NVERLGIENVIFVCGDGYYGVPE----FSPYDVIFVTVGVDEVPETW---FTQLKEGGRVIVPINLKLSRRQPAFLFKK- 190 (317)
T ss_dssp HHHHTTCCSEEEEESCGGGCCGG----GCCEEEEEECSBBSCCCHHH---HHHEEEEEEEEEEBCBGGGTBCEEEEEEE-
T ss_pred HHHHcCCCCeEEEECChhhcccc----CCCeEEEEEcCCHHHHHHHH---HHhcCCCcEEEEEECCCCcccceEEEEEE-
Confidence 99999988899999999875432 14799999998866555333 345689999999987643 1111221110
Q ss_pred CCCCccCCCeEEeEeeeeccCCCCCceeE
Q 043853 187 VGDQNIKGCYKLKSLQPVDMFPHTPHIEC 215 (222)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 215 (222)
....|....+.+..++|..++++.
T Consensus 191 -----~~~~~~~~~i~~~~~~p~~~~~~~ 214 (317)
T 1dl5_A 191 -----KDPYLVGNYKLETRFITAGGNLGN 214 (317)
T ss_dssp -----ETTEEEEEEEEECCCCBCCGGGSC
T ss_pred -----eCCcEEEEEeccEEEEEccCcccc
Confidence 134578888888899999887653
No 43
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.65 E-value=1e-15 Score=120.00 Aligned_cols=140 Identities=19% Similarity=0.190 Sum_probs=106.1
Q ss_pred HHHHhcCCCCCCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCC
Q 043853 57 IEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFP 136 (222)
Q Consensus 57 i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 136 (222)
+.+.+... ++.+|||+|||+|.++..+++.+.+++++|+|+.+++.|++++..++.++++++.+|+.+.... .+
T Consensus 69 ~~~~l~~~--~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~----~~ 142 (210)
T 3lbf_A 69 MTELLELT--PQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQA----RA 142 (210)
T ss_dssp HHHHTTCC--TTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG----GC
T ss_pred HHHhcCCC--CCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCcc----CC
Confidence 44444333 4789999999999999999988889999999999999999999999988899999999875442 24
Q ss_pred CCcEEEECCCCCCccHHHHHHHHhCCCCcEEEEeeCccchHhhHHHhhccCCCCccCCCeEEeEeeeeccCCCCCce
Q 043853 137 KPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHI 213 (222)
Q Consensus 137 ~fD~ii~~pp~~~~~~~~~~~l~~l~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 213 (222)
.||+|+++.....+... ....++|+|.+++++.... ..+..+.+ ..++|....+.++.++|.+...
T Consensus 143 ~~D~i~~~~~~~~~~~~---~~~~L~pgG~lv~~~~~~~--~~~~~~~~------~~~~~~~~~~~~~~f~pl~~~~ 208 (210)
T 3lbf_A 143 PFDAIIVTAAPPEIPTA---LMTQLDEGGILVLPVGEEH--QYLKRVRR------RGGEFIIDTVEAVRFVPLVKGE 208 (210)
T ss_dssp CEEEEEESSBCSSCCTH---HHHTEEEEEEEEEEECSSS--CEEEEEEE------ETTEEEEEEEEECCCCBCCCSS
T ss_pred CccEEEEccchhhhhHH---HHHhcccCcEEEEEEcCCc--eEEEEEEE------cCCeEEEEEeccEEEEEccCcc
Confidence 79999998654444332 3445789999998887621 11111111 2567888999999999988754
No 44
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.64 E-value=5.4e-15 Score=116.65 Aligned_cols=125 Identities=13% Similarity=0.070 Sum_probs=94.3
Q ss_pred CCCeEEEEecccchhHHHHhhc--CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEEC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARW--VKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISD 144 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~--~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~ 144 (222)
++.+|||+|||+|.+++.+|+. ..+++|+|+|+.+++.|++++..+++++++++++|+.++...+. .+.||.|+++
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~--~~~~d~v~~~ 115 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFE--PGEVKRVYLN 115 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCC--TTSCCEEEEE
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcC--cCCcCEEEEE
Confidence 4679999999999999999986 45999999999999999999999999889999999988643222 2479999886
Q ss_pred CCCC----------CccHHHHHHHHh-CCCCcEEEEeeCccchHhhH-HHhhccCCCCccCCCeEEeEe
Q 043853 145 PNRP----------GMHMKLIKFLLK-LKAPRIVYVSCNPATCARDL-DYLCHGVGDQNIKGCYKLKSL 201 (222)
Q Consensus 145 pp~~----------~~~~~~~~~l~~-l~~~~~v~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~ 201 (222)
.|.. -....+++.+.. |+|+|.+++.++........ ..+. +.+|+....
T Consensus 116 ~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~--------~~g~~~~~~ 176 (213)
T 2fca_A 116 FSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFS--------EYGLLLTYV 176 (213)
T ss_dssp SCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHH--------HHTCEEEEE
T ss_pred CCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHH--------HCCCccccc
Confidence 5421 113566666654 89999999998765555443 3443 346665543
No 45
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.64 E-value=2.8e-15 Score=124.35 Aligned_cols=146 Identities=19% Similarity=0.264 Sum_probs=96.1
Q ss_pred HHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCC
Q 043853 55 KLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNA 134 (222)
Q Consensus 55 ~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~ 134 (222)
+.+.+.+... ++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.|++++..++.++++++++|+.++..
T Consensus 32 ~~i~~~~~~~--~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~----- 104 (299)
T 2h1r_A 32 DKIIYAAKIK--SSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVF----- 104 (299)
T ss_dssp HHHHHHHCCC--TTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCC-----
T ss_pred HHHHHhcCCC--CcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCc-----
Confidence 3344444433 478999999999999999998888999999999999999999988888789999999987643
Q ss_pred CCCCcEEEECCCCCCccHHHHHHHHhCCC-C-cEEEE-------------eeCccchHhhHHHhhccCCCCccCCCeEEe
Q 043853 135 FPKPDIVISDPNRPGMHMKLIKFLLKLKA-P-RIVYV-------------SCNPATCARDLDYLCHGVGDQNIKGCYKLK 199 (222)
Q Consensus 135 ~~~fD~ii~~pp~~~~~~~~~~~l~~l~~-~-~~v~~-------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 199 (222)
..||+|++|+|+....+.+...+..... . .++.+ ++...++..+.+.+++ .+..
T Consensus 105 -~~~D~Vv~n~py~~~~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G~~~y~~ls~~~~~~~~----------~~~~ 173 (299)
T 2h1r_A 105 -PKFDVCTANIPYKISSPLIFKLISHRPLFKCAVLMFQKEFAERMLANVGDSNYSRLTINVKLFCK----------VTKV 173 (299)
T ss_dssp -CCCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTTSTTCCHHHHHHHHHEE----------EEEE
T ss_pred -ccCCEEEEcCCcccccHHHHHHHhcCCccceeeehHHHHHHHHHhcCCCCcchhHHHHHHHHhhc----------eEEE
Confidence 3799999999976554444444432111 1 11111 2344555555555531 1222
Q ss_pred EeeeeccCCCCCceeEEEE
Q 043853 200 SLQPVDMFPHTPHIECVCL 218 (222)
Q Consensus 200 ~~~~~~~~p~~~~~~~v~~ 218 (222)
...+...|+.+++++.+.+
T Consensus 174 ~~v~~~~F~p~p~V~s~vv 192 (299)
T 2h1r_A 174 CNVNRSSFNPPPKVDSVIV 192 (299)
T ss_dssp EEECGGGEESCCSSCEEEE
T ss_pred EEECchhcCCCCCCEEEEE
Confidence 2334458888998876554
No 46
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.64 E-value=5e-15 Score=126.44 Aligned_cols=163 Identities=17% Similarity=0.139 Sum_probs=112.3
Q ss_pred cCeeEEEcCCccccCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhc--CCeEEEEeCCHHHHHHHHHH
Q 043853 31 RGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARW--VKHVYGYEVVPQAISDACRN 108 (222)
Q Consensus 31 ~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~--~~~v~gvD~~~~~i~~a~~n 108 (222)
.+..+...++.|.+.+......+ +.+.+... ++.+|||+|||+|.+++.+++. ..+++|+|+|+.+++.|++|
T Consensus 191 ~~~~~~~~pg~Fs~~~~d~~~~~---ll~~l~~~--~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n 265 (375)
T 4dcm_A 191 TDWTIHNHANVFSRTGLDIGARF---FMQHLPEN--LEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLN 265 (375)
T ss_dssp TTEEEEECTTCTTCSSCCHHHHH---HHHTCCCS--CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHH
T ss_pred CceEEEeCCCcccCCcccHHHHH---HHHhCccc--CCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHH
Confidence 45677778899988665554432 33443322 3579999999999999999987 46999999999999999999
Q ss_pred HHHcCCC---cEEEEeCchhchhhhcCCCCCCCcEEEECCCCC-------CccHHHHHHHH-hCCCCcEEEEeeCccc-h
Q 043853 109 AKLNNIS---NATFVQGDLNKIGGDFGNAFPKPDIVISDPNRP-------GMHMKLIKFLL-KLKAPRIVYVSCNPAT-C 176 (222)
Q Consensus 109 ~~~~~~~---~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~-------~~~~~~~~~l~-~l~~~~~v~~~~~~~~-~ 176 (222)
++.++++ ++++..+|+.+... .+.||+|++|||.. .....+++.+. .++|+|.+++.++... .
T Consensus 266 ~~~ngl~~~~~v~~~~~D~~~~~~-----~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~~~ 340 (375)
T 4dcm_A 266 VETNMPEALDRCEFMINNALSGVE-----PFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDY 340 (375)
T ss_dssp HHHHCGGGGGGEEEEECSTTTTCC-----TTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEETTSCH
T ss_pred HHHcCCCcCceEEEEechhhccCC-----CCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECCcCH
Confidence 9999875 48999999987432 24799999999932 12224455554 4899999998875433 2
Q ss_pred HhhHHHhhccCCCCccCCCeEEeEeee
Q 043853 177 ARDLDYLCHGVGDQNIKGCYKLKSLQP 203 (222)
Q Consensus 177 ~~~~~~l~~~~~~~~~~~~~~~~~~~~ 203 (222)
...+...........-..+|++.....
T Consensus 341 ~~~l~~~fg~~~~~a~~~~F~V~~~~~ 367 (375)
T 4dcm_A 341 FHKLKKIFGNCTTIATNNKFVVLKAVK 367 (375)
T ss_dssp HHHHHHHHSCCEEEEECSSEEEEEEEC
T ss_pred HHHHHHhcCCEEEEeeCCCEEEEEEcC
Confidence 223333322222222255677766543
No 47
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.64 E-value=1.4e-15 Score=129.78 Aligned_cols=125 Identities=23% Similarity=0.264 Sum_probs=94.8
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCC--eEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEeCchh
Q 043853 49 QAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVK--HVYGYEVVPQAISDACRNAKLNNIS-NATFVQGDLN 125 (222)
Q Consensus 49 ~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~--~v~gvD~~~~~i~~a~~n~~~~~~~-~v~~~~~d~~ 125 (222)
+.+.+...+..++ . .++.+|||+|||+|.+++.++..+. +++|+|+|+.+++.|++|++.+|++ ++++.++|+.
T Consensus 202 l~~~la~~l~~~~-~--~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~ 278 (373)
T 3tm4_A 202 LKASIANAMIELA-E--LDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDAT 278 (373)
T ss_dssp CCHHHHHHHHHHH-T--CCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGG
T ss_pred ccHHHHHHHHHhh-c--CCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChh
Confidence 3445555555554 2 3478999999999999999998776 9999999999999999999999984 5999999999
Q ss_pred chhhhcCCCCCCCcEEEECCCCCC----------ccHHHHHHHHhCCCCcEEEEeeCccchHhhH
Q 043853 126 KIGGDFGNAFPKPDIVISDPNRPG----------MHMKLIKFLLKLKAPRIVYVSCNPATCARDL 180 (222)
Q Consensus 126 ~~~~~~~~~~~~fD~ii~~pp~~~----------~~~~~~~~l~~l~~~~~v~~~~~~~~~~~~~ 180 (222)
+++.. .+.||+|++|||+.. +...+.+.+.+.-+++.+++++++..+.+.+
T Consensus 279 ~~~~~----~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l~g~~~~i~~~~~~~~~~~ 339 (373)
T 3tm4_A 279 QLSQY----VDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVLEKRGVFITTEKKAIEEAI 339 (373)
T ss_dssp GGGGT----CSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHEEEEEEEEESCHHHHHHHH
T ss_pred hCCcc----cCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence 87642 247999999999431 1245556665522677788888775555433
No 48
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.64 E-value=1e-14 Score=123.56 Aligned_cols=119 Identities=24% Similarity=0.243 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcC---CeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchh
Q 043853 49 QAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWV---KHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLN 125 (222)
Q Consensus 49 ~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~---~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~ 125 (222)
+.+.+...+..++... ++..|||+|||+|.+++.++..+ .+++|+|+|+.+++.|++|++..+++++++.++|+.
T Consensus 187 l~~~la~~l~~~~~~~--~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~ 264 (354)
T 3tma_A 187 LTPVLAQALLRLADAR--PGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADAR 264 (354)
T ss_dssp CCHHHHHHHHHHTTCC--TTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGG
T ss_pred cCHHHHHHHHHHhCCC--CCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChh
Confidence 4445555566665443 47899999999999999988754 699999999999999999999999888999999999
Q ss_pred chhhhcCCCCCCCcEEEECCCCCCc----------cHHHHHHHHh-CCCCcEEEEeeCc
Q 043853 126 KIGGDFGNAFPKPDIVISDPNRPGM----------HMKLIKFLLK-LKAPRIVYVSCNP 173 (222)
Q Consensus 126 ~~~~~~~~~~~~fD~ii~~pp~~~~----------~~~~~~~l~~-l~~~~~v~~~~~~ 173 (222)
+++... ..||+|++|||+... ...+.+.+.+ ++|+|.+++.+..
T Consensus 265 ~~~~~~----~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~ 319 (354)
T 3tma_A 265 HLPRFF----PEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR 319 (354)
T ss_dssp GGGGTC----CCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC
T ss_pred hCcccc----CCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 876532 368999999995321 1345555544 6788888776654
No 49
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.64 E-value=7.9e-16 Score=117.46 Aligned_cols=122 Identities=17% Similarity=0.134 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcC-CeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEeCchhch
Q 043853 50 AEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWV-KHVYGYEVVPQAISDACRNAKLNNIS-NATFVQGDLNKI 127 (222)
Q Consensus 50 ~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~-~~v~gvD~~~~~i~~a~~n~~~~~~~-~v~~~~~d~~~~ 127 (222)
++.+.+.+.+.+... .++.+|||+|||+|.+++.+++.. .+++|+|+|+.+++.|+++++.++++ +++++++|+.+.
T Consensus 15 ~~~~~~~~~~~l~~~-~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 93 (177)
T 2esr_A 15 SDKVRGAIFNMIGPY-FNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERA 93 (177)
T ss_dssp ---CHHHHHHHHCSC-CCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHhh-cCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHh
Confidence 344455555555311 246799999999999999888764 59999999999999999999999886 599999999886
Q ss_pred hhhcCCCCCCCcEEEECCCCC-CccHHHHHHH---HhCCCCcEEEEeeCccc
Q 043853 128 GGDFGNAFPKPDIVISDPNRP-GMHMKLIKFL---LKLKAPRIVYVSCNPAT 175 (222)
Q Consensus 128 ~~~~~~~~~~fD~ii~~pp~~-~~~~~~~~~l---~~l~~~~~v~~~~~~~~ 175 (222)
..... +.||+|+++||.. .....+++.+ +.++++|++++++....
T Consensus 94 ~~~~~---~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 94 IDCLT---GRFDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp HHHBC---SCEEEEEECCSSHHHHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred HHhhc---CCCCEEEECCCCCcchHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 44322 3699999999852 3335555666 34789999998886533
No 50
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.64 E-value=1.4e-16 Score=127.47 Aligned_cols=144 Identities=19% Similarity=0.213 Sum_probs=107.5
Q ss_pred HHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcC-CeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCC
Q 043853 55 KLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWV-KHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGN 133 (222)
Q Consensus 55 ~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~-~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~ 133 (222)
..+.+.+... ++.+|||+|||+|.++..+++.. .+++++|+++.+++.|+++++..+++++++..+|+......
T Consensus 81 ~~~~~~l~~~--~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~--- 155 (235)
T 1jg1_A 81 AIMLEIANLK--PGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPP--- 155 (235)
T ss_dssp HHHHHHHTCC--TTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG---
T ss_pred HHHHHhcCCC--CCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCC---
Confidence 3344444333 47799999999999999998866 79999999999999999999999988899999998332221
Q ss_pred CCCCCcEEEECCCCCCccHHHHHHHHhCCCCcEEEEeeCccchHhhHHHhhccCCCCccCCCeEEeEeeeeccCCCCCce
Q 043853 134 AFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHI 213 (222)
Q Consensus 134 ~~~~fD~ii~~pp~~~~~~~~~~~l~~l~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 213 (222)
...||+|+++.+...+... ....++++|.+++++........+..+.+ .+++|+...+.+++++|.+.+.
T Consensus 156 -~~~fD~Ii~~~~~~~~~~~---~~~~L~pgG~lvi~~~~~~~~~~l~~~~~------~~~~~~~~~~~~~~f~p~~~~~ 225 (235)
T 1jg1_A 156 -KAPYDVIIVTAGAPKIPEP---LIEQLKIGGKLIIPVGSYHLWQELLEVRK------TKDGIKIKNHGGVAFVPLIGEY 225 (235)
T ss_dssp -GCCEEEEEECSBBSSCCHH---HHHTEEEEEEEEEEECSSSSCEEEEEEEE------ETTEEEEEEEEEECCCBCBSTT
T ss_pred -CCCccEEEECCcHHHHHHH---HHHhcCCCcEEEEEEecCCCccEEEEEEE------eCCeEEEEEeccEEEEEccCCC
Confidence 1359999998875555443 34457899999999976554333332321 1467999999999999988763
No 51
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.64 E-value=3.1e-15 Score=119.38 Aligned_cols=147 Identities=16% Similarity=0.191 Sum_probs=105.7
Q ss_pred CCCCCCCeEEEEecccchhHHHHhhc-C--CeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCc
Q 043853 63 LRDDGSEIVLDLFCGTGTIGLTLARW-V--KHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPD 139 (222)
Q Consensus 63 ~~~~~~~~vlDlg~G~G~~~~~la~~-~--~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD 139 (222)
+...++++|||+|||+|.++..+|+. + .+|+|+|+++.|++.++++++.. .|+..+.+|....... ....+.+|
T Consensus 73 l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~--~ni~~V~~d~~~p~~~-~~~~~~vD 149 (233)
T 4df3_A 73 LPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR--RNIFPILGDARFPEKY-RHLVEGVD 149 (233)
T ss_dssp CCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC--TTEEEEESCTTCGGGG-TTTCCCEE
T ss_pred cCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh--cCeeEEEEeccCcccc-ccccceEE
Confidence 34456999999999999999999985 2 48999999999999999987653 4789999998765432 22235799
Q ss_pred EEEECCCCCCccHHHHHHHH-hCCCCcEEEEee----------CccchHhhHHHhhccCCCCccCCCeEEeEeeeeccCC
Q 043853 140 IVISDPNRPGMHMKLIKFLL-KLKAPRIVYVSC----------NPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFP 208 (222)
Q Consensus 140 ~ii~~pp~~~~~~~~~~~l~-~l~~~~~v~~~~----------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~p 208 (222)
+|+++.+..+....++..+. .|+|+|.++++. ....+.++.+.+. +.||++.+...++-|+
T Consensus 150 vVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~--------~~GF~l~e~i~L~pf~ 221 (233)
T 4df3_A 150 GLYADVAQPEQAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLM--------DGGLEIKDVVHLDPFD 221 (233)
T ss_dssp EEEECCCCTTHHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHH--------HTTCCEEEEEECTTTS
T ss_pred EEEEeccCChhHHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHH--------HCCCEEEEEEccCCCC
Confidence 99999887665555665554 489999988764 2334455566664 6789888766555555
Q ss_pred CCCceeEEEEEEe
Q 043853 209 HTPHIECVCLLEL 221 (222)
Q Consensus 209 ~~~~~~~v~~~~~ 221 (222)
+ .|.-.+.++.|
T Consensus 222 ~-~H~lv~~~~rR 233 (233)
T 4df3_A 222 R-DHAMIYAVMRR 233 (233)
T ss_dssp T-TEEEEEECC--
T ss_pred C-ceEEEEEEEeC
Confidence 4 47666666554
No 52
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.63 E-value=7.5e-15 Score=114.31 Aligned_cols=127 Identities=20% Similarity=0.209 Sum_probs=92.1
Q ss_pred ccccCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCC-eEEEEeCCHHHHHHHHHHHHHcCCCcEEE
Q 043853 41 SFFQTNTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVK-HVYGYEVVPQAISDACRNAKLNNISNATF 119 (222)
Q Consensus 41 ~f~~~~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~-~v~gvD~~~~~i~~a~~n~~~~~~~~v~~ 119 (222)
.+++++......+...+... . ..++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.|++|+. ++++
T Consensus 28 ~~~~~~~~~~~~l~~~~~~~-~--~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~-----~~~~ 99 (200)
T 1ne2_A 28 EQYPTDASTAAYFLIEIYND-G--NIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG-----GVNF 99 (200)
T ss_dssp --CCCCHHHHHHHHHHHHHH-T--SSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT-----TSEE
T ss_pred eecCCCHHHHHHHHHHHHhc-C--CCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC-----CCEE
Confidence 45666677777766555443 1 22468999999999999999987644 79999999999999999875 6899
Q ss_pred EeCchhchhhhcCCCCCCCcEEEECCCC----CCccHHHHHHHHhCCCCcEEEEeeCccchHhhHHHhh
Q 043853 120 VQGDLNKIGGDFGNAFPKPDIVISDPNR----PGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLC 184 (222)
Q Consensus 120 ~~~d~~~~~~~~~~~~~~fD~ii~~pp~----~~~~~~~~~~l~~l~~~~~v~~~~~~~~~~~~~~~l~ 184 (222)
+++|+.+++ +.||+|+++||. .+....+++.+.+.. +.+|+.+++.+.....+.+.
T Consensus 100 ~~~d~~~~~-------~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~--g~~~~~~~~~~~~~~~~~~~ 159 (200)
T 1ne2_A 100 MVADVSEIS-------GKYDTWIMNPPFGSVVKHSDRAFIDKAFETS--MWIYSIGNAKARDFLRREFS 159 (200)
T ss_dssp EECCGGGCC-------CCEEEEEECCCC-------CHHHHHHHHHHE--EEEEEEEEGGGHHHHHHHHH
T ss_pred EECcHHHCC-------CCeeEEEECCCchhccCchhHHHHHHHHHhc--CcEEEEEcCchHHHHHHHHH
Confidence 999998853 379999999993 333345566555433 66888888777655555543
No 53
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.62 E-value=2.1e-15 Score=121.82 Aligned_cols=123 Identities=15% Similarity=0.031 Sum_probs=89.3
Q ss_pred eeeeecCeeEEEcCCccccC--CHHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhc--CCeEEEEeCCHHH
Q 043853 26 ITETLRGLTFQISANSFFQT--NTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARW--VKHVYGYEVVPQA 101 (222)
Q Consensus 26 ~~~~~~~~~~~~~~~~f~~~--~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~--~~~v~gvD~~~~~ 101 (222)
+...++|..|.++++.|+|. +.+.+..++..+...+.....++.+|||+|||+|.+++.++.. ..+++|+|+|+.+
T Consensus 22 ~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~ 101 (254)
T 2h00_A 22 LLREDFGLSIDIPLERLIPTVPLRLNYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMC 101 (254)
T ss_dssp HHHHHHCCCCCCCTTSCCCCHHHHHHHHHHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHH
T ss_pred HHHHcCCeeeecCccccCCCccchHHHHHHHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHH
Confidence 34456788899999999885 2234444444333322211124679999999999999988765 5699999999999
Q ss_pred HHHHHHHHHHcCCCc-EEEEeCchhch-hhhcCCC-CCCCcEEEECCCCC
Q 043853 102 ISDACRNAKLNNISN-ATFVQGDLNKI-GGDFGNA-FPKPDIVISDPNRP 148 (222)
Q Consensus 102 i~~a~~n~~~~~~~~-v~~~~~d~~~~-~~~~~~~-~~~fD~ii~~pp~~ 148 (222)
++.|++|++.+++++ ++++++|+.+. ...+... .+.||+|++|||+.
T Consensus 102 ~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i~~npp~~ 151 (254)
T 2h00_A 102 FNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFCMCNPPFF 151 (254)
T ss_dssp HHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEEEECCCCC
T ss_pred HHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEEEECCCCc
Confidence 999999999999876 99999998762 2222211 14799999999854
No 54
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.62 E-value=7.2e-15 Score=112.75 Aligned_cols=115 Identities=25% Similarity=0.360 Sum_probs=89.0
Q ss_pred HHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCC-CcEEEEeCchhchhhh
Q 043853 52 VLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNI-SNATFVQGDLNKIGGD 130 (222)
Q Consensus 52 ~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~-~~v~~~~~d~~~~~~~ 130 (222)
.+..++.+.+... ++.+|||+|||+|.++..+++...+++++|+|+.+++.+++++..++. +++++.++|+.+....
T Consensus 20 ~~~~~~~~~~~~~--~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 97 (192)
T 1l3i_A 20 EVRCLIMCLAEPG--KNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCK 97 (192)
T ss_dssp HHHHHHHHHHCCC--TTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTT
T ss_pred HHHHHHHHhcCCC--CCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhccc
Confidence 3444455555433 478999999999999999988778999999999999999999999988 5699999999873322
Q ss_pred cCCCCCCCcEEEECCCCCCccHHHHHHHHh-CCCCcEEEEeeCc
Q 043853 131 FGNAFPKPDIVISDPNRPGMHMKLIKFLLK-LKAPRIVYVSCNP 173 (222)
Q Consensus 131 ~~~~~~~fD~ii~~pp~~~~~~~~~~~l~~-l~~~~~v~~~~~~ 173 (222)
.+.||+|+++.+.... ..+++.+.. ++++|.+++....
T Consensus 98 ----~~~~D~v~~~~~~~~~-~~~l~~~~~~l~~gG~l~~~~~~ 136 (192)
T 1l3i_A 98 ----IPDIDIAVVGGSGGEL-QEILRIIKDKLKPGGRIIVTAIL 136 (192)
T ss_dssp ----SCCEEEEEESCCTTCH-HHHHHHHHHTEEEEEEEEEEECB
T ss_pred ----CCCCCEEEECCchHHH-HHHHHHHHHhcCCCcEEEEEecC
Confidence 1379999999875444 555555544 7899888876654
No 55
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.61 E-value=1.4e-14 Score=118.59 Aligned_cols=105 Identities=17% Similarity=0.154 Sum_probs=81.7
Q ss_pred CCCeEEEEecccchhHHHHhhc--C-CeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEE
Q 043853 67 GSEIVLDLFCGTGTIGLTLARW--V-KHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVIS 143 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~--~-~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~ 143 (222)
++.+|||+|||+|+.+..+++. + .+|+|+|+|+.+++.+++|++.+++++++++++|+.++...+....+.||+|++
T Consensus 83 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl~ 162 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKILL 162 (274)
T ss_dssp TTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEEEE
Confidence 4789999999999999988863 3 699999999999999999999999988999999998876432111247999999
Q ss_pred CCCCCCc--------------------cHHHHHHHH-hCCCCcEEEEee
Q 043853 144 DPNRPGM--------------------HMKLIKFLL-KLKAPRIVYVSC 171 (222)
Q Consensus 144 ~pp~~~~--------------------~~~~~~~l~-~l~~~~~v~~~~ 171 (222)
|||..+. ...+++.+. .++|+|.+++++
T Consensus 163 d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~st 211 (274)
T 3ajd_A 163 DAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYST 211 (274)
T ss_dssp EECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 9997542 245555443 478888765544
No 56
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.61 E-value=4.8e-14 Score=107.20 Aligned_cols=114 Identities=15% Similarity=0.112 Sum_probs=85.8
Q ss_pred HHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhc--CCeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEeCchhchh
Q 043853 52 VLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARW--VKHVYGYEVVPQAISDACRNAKLNNIS-NATFVQGDLNKIG 128 (222)
Q Consensus 52 ~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~--~~~v~gvD~~~~~i~~a~~n~~~~~~~-~v~~~~~d~~~~~ 128 (222)
.+.+.+.+.+... ++.+|||+|||+|.++..+++. ..+++|+|+|+.+++.|+++++.++++ ++ ++++|..+..
T Consensus 12 ~~~~~~~~~~~~~--~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~ 88 (178)
T 3hm2_A 12 HVRALAISALAPK--PHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAF 88 (178)
T ss_dssp HHHHHHHHHHCCC--TTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGG
T ss_pred HHHHHHHHHhccc--CCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhh
Confidence 3344455555433 4789999999999999999886 459999999999999999999999987 69 8889986643
Q ss_pred hhcCCCCCCCcEEEECCCCCCccHHHHHHH-HhCCCCcEEEEeeCc
Q 043853 129 GDFGNAFPKPDIVISDPNRPGMHMKLIKFL-LKLKAPRIVYVSCNP 173 (222)
Q Consensus 129 ~~~~~~~~~fD~ii~~pp~~~~~~~~~~~l-~~l~~~~~v~~~~~~ 173 (222)
... .+.||+|+++.+... ..+++.+ +.++|+|.+++....
T Consensus 89 ~~~---~~~~D~i~~~~~~~~--~~~l~~~~~~L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 89 DDV---PDNPDVIFIGGGLTA--PGVFAAAWKRLPVGGRLVANAVT 129 (178)
T ss_dssp GGC---CSCCSEEEECC-TTC--TTHHHHHHHTCCTTCEEEEEECS
T ss_pred hcc---CCCCCEEEECCcccH--HHHHHHHHHhcCCCCEEEEEeec
Confidence 321 147999999886443 3455554 448999998877654
No 57
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.60 E-value=2.4e-14 Score=119.52 Aligned_cols=79 Identities=20% Similarity=0.233 Sum_probs=69.0
Q ss_pred CCCeEEEEecccchhHHHHhhcC---CeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEE
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWV---KHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVIS 143 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~---~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~ 143 (222)
++.+|||+|||+|..+..+++.. .+++|+|+|+.+++.+++|++.+++++++++++|+.++... .+.||+|++
T Consensus 118 ~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~----~~~fD~Il~ 193 (315)
T 1ixk_A 118 PGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGEL----NVEFDKILL 193 (315)
T ss_dssp TTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGG----CCCEEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccc----cccCCEEEE
Confidence 47899999999999999998752 58999999999999999999999998899999999887541 247999999
Q ss_pred CCCCCC
Q 043853 144 DPNRPG 149 (222)
Q Consensus 144 ~pp~~~ 149 (222)
|||..+
T Consensus 194 d~Pcsg 199 (315)
T 1ixk_A 194 DAPCTG 199 (315)
T ss_dssp ECCTTS
T ss_pred eCCCCC
Confidence 999543
No 58
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.60 E-value=1.1e-14 Score=112.98 Aligned_cols=132 Identities=15% Similarity=0.181 Sum_probs=93.9
Q ss_pred CCCeEEEEecccchhHHHHhhcC---CeEEEEeCCHHHHHHHHHHHHHcCC-CcEEEEeCchhchhhhcCCCCCCCcEEE
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWV---KHVYGYEVVPQAISDACRNAKLNNI-SNATFVQGDLNKIGGDFGNAFPKPDIVI 142 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~---~~v~gvD~~~~~i~~a~~n~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~ii 142 (222)
++.+|||+|||+|.++..+++.. .+++|+|+|+.+++.|+++++.+++ ++++++++|+.++.... .+.||+|+
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~---~~~fD~v~ 98 (197)
T 3eey_A 22 EGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYI---DCPVKAVM 98 (197)
T ss_dssp TTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTC---CSCEEEEE
T ss_pred CCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhc---cCCceEEE
Confidence 47899999999999999888752 4999999999999999999999988 56999999998875432 25799999
Q ss_pred ECCCCCC-----------ccHHHHHHH-HhCCCCcEEEEeeCcc-----chHhhHHHhhccCCCCccCCCeEEeEeeeec
Q 043853 143 SDPNRPG-----------MHMKLIKFL-LKLKAPRIVYVSCNPA-----TCARDLDYLCHGVGDQNIKGCYKLKSLQPVD 205 (222)
Q Consensus 143 ~~pp~~~-----------~~~~~~~~l-~~l~~~~~v~~~~~~~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 205 (222)
+++|.-. ....+++.+ +.++++|.+++.+... .....+..+.... -..+|++.....+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~v~~~~~~~ 174 (197)
T 3eey_A 99 FNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGV----DQKKFIVQRTDFIN 174 (197)
T ss_dssp EEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTS----CTTTEEEEEEEETT
T ss_pred EcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhC----CCCcEEEEEEEecc
Confidence 9986410 012344444 4489999988775221 1122233332211 14578888877655
No 59
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.59 E-value=3.8e-14 Score=107.89 Aligned_cols=130 Identities=19% Similarity=0.183 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhch
Q 043853 48 HQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKI 127 (222)
Q Consensus 48 ~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~ 127 (222)
+.++.+.+++... . .++.+|||+|||+|.++..+++.+ +++|+|+|+.+++. ..+++++++|+.+.
T Consensus 8 ~~~~~l~~~l~~~-~---~~~~~vLD~GcG~G~~~~~l~~~~-~v~gvD~s~~~~~~---------~~~~~~~~~d~~~~ 73 (170)
T 3q87_B 8 EDTYTLMDALERE-G---LEMKIVLDLGTSTGVITEQLRKRN-TVVSTDLNIRALES---------HRGGNLVRADLLCS 73 (170)
T ss_dssp HHHHHHHHHHHHH-T---CCSCEEEEETCTTCHHHHHHTTTS-EEEEEESCHHHHHT---------CSSSCEEECSTTTT
T ss_pred ccHHHHHHHHHhh-c---CCCCeEEEeccCccHHHHHHHhcC-cEEEEECCHHHHhc---------ccCCeEEECChhhh
Confidence 4555566654332 1 236799999999999999999888 99999999999988 23588999999874
Q ss_pred hhhcCCCCCCCcEEEECCCCCC------------ccHHHHHHHHhCCCCcEEEEeeCccchHhhHHHhhccCCCCccCCC
Q 043853 128 GGDFGNAFPKPDIVISDPNRPG------------MHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGC 195 (222)
Q Consensus 128 ~~~~~~~~~~fD~ii~~pp~~~------------~~~~~~~~l~~l~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 195 (222)
... +.||+|+++||... ....+.+.+..+ |+|.+++.+.......++..+.+ +.|
T Consensus 74 ~~~-----~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~-------~~g 140 (170)
T 3q87_B 74 INQ-----ESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLE-------ERG 140 (170)
T ss_dssp BCG-----GGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHH-------HTT
T ss_pred ccc-----CCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHH-------HCC
Confidence 322 47999999998431 123334444556 99999887766555566654443 568
Q ss_pred eEEeEeeee
Q 043853 196 YKLKSLQPV 204 (222)
Q Consensus 196 ~~~~~~~~~ 204 (222)
|+...+...
T Consensus 141 f~~~~~~~~ 149 (170)
T 3q87_B 141 YGTRILKVR 149 (170)
T ss_dssp CEEEEEEEE
T ss_pred CcEEEEEee
Confidence 887776543
No 60
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.59 E-value=3.9e-14 Score=110.54 Aligned_cols=136 Identities=15% Similarity=0.143 Sum_probs=102.4
Q ss_pred CCeEEEEecccchhHHHHhhc--CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECC
Q 043853 68 SEIVLDLFCGTGTIGLTLARW--VKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDP 145 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~--~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~p 145 (222)
+.+|||+|||+|.++..+++. ..+++|+|+|+.+++.|+++++.++++++++.++|+.+... .+.||+|+++.
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~~~~D~i~~~~ 140 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPS-----EPPFDGVISRA 140 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCC-----CSCEEEEECSC
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCc-----cCCcCEEEEec
Confidence 679999999999999999876 45999999999999999999999998889999999987652 24799999875
Q ss_pred CCCCccHHHHHHHHh-CCCCcEEEEeeCccchHhhHHHhhccCCCCccCCCeEEeEeeeeccCCCCCceeEEEEEEe
Q 043853 146 NRPGMHMKLIKFLLK-LKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLLEL 221 (222)
Q Consensus 146 p~~~~~~~~~~~l~~-l~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~~~~~ 221 (222)
. .....+++.+.. ++|+|.+++...... ..++..+. . +|+......+. +|.......+.++++
T Consensus 141 ~--~~~~~~l~~~~~~L~~gG~l~~~~~~~~-~~~~~~~~--------~-g~~~~~~~~~~-~~~~~~~~~~~~~~k 204 (207)
T 1jsx_A 141 F--ASLNDMVSWCHHLPGEQGRFYALKGQMP-EDEIALLP--------E-EYQVESVVKLQ-VPALDGERHLVVIKA 204 (207)
T ss_dssp S--SSHHHHHHHHTTSEEEEEEEEEEESSCC-HHHHHTSC--------T-TEEEEEEEEEE-CC--CCEEEEEEEEE
T ss_pred c--CCHHHHHHHHHHhcCCCcEEEEEeCCCc-hHHHHHHh--------c-CCceeeeeeec-cCCCCCceEEEEEEe
Confidence 3 223556666654 789999988766533 33444432 3 89888776653 777776677666665
No 61
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.59 E-value=1.8e-14 Score=114.41 Aligned_cols=119 Identities=9% Similarity=0.037 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhc---CCeEEEEeCCHHHHHHHHHHHHHcCCC--cEEEEeCc
Q 043853 49 QAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARW---VKHVYGYEVVPQAISDACRNAKLNNIS--NATFVQGD 123 (222)
Q Consensus 49 ~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~---~~~v~gvD~~~~~i~~a~~n~~~~~~~--~v~~~~~d 123 (222)
....++.++..... +.++.+|||+|||+|..++.+++. ..+++++|+|+.+++.|+++++..+++ +++++++|
T Consensus 40 ~~~~~l~~l~~~~~--~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gd 117 (221)
T 3dr5_A 40 MTGQLLTTLAATTN--GNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSR 117 (221)
T ss_dssp HHHHHHHHHHHHSC--CTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSC
T ss_pred HHHHHHHHHHHhhC--CCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcC
Confidence 34444455544432 112459999999999999999875 459999999999999999999999986 59999999
Q ss_pred hhchhhhcCCCCCCCcEEEECCCCCCccHHHHHHHHhCCCCcEEEEee
Q 043853 124 LNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSC 171 (222)
Q Consensus 124 ~~~~~~~~~~~~~~fD~ii~~pp~~~~~~~~~~~l~~l~~~~~v~~~~ 171 (222)
+.+....+. .+.||+|+++.+......-+....+.++|+|+++++.
T Consensus 118 a~~~l~~~~--~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 118 PLDVMSRLA--NDSYQLVFGQVSPMDLKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp HHHHGGGSC--TTCEEEEEECCCTTTHHHHHHHHHHHEEEEEEEEETT
T ss_pred HHHHHHHhc--CCCcCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEEeC
Confidence 988765542 2589999999876554333344445689999988643
No 62
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.59 E-value=9.8e-14 Score=109.21 Aligned_cols=159 Identities=12% Similarity=0.105 Sum_probs=106.8
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcC--CeEEEEeCCHHHHHHHHHHHHHcCCC-----cEEEEe
Q 043853 49 QAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWV--KHVYGYEVVPQAISDACRNAKLNNIS-----NATFVQ 121 (222)
Q Consensus 49 ~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~--~~v~gvD~~~~~i~~a~~n~~~~~~~-----~v~~~~ 121 (222)
..+...+++.+.+... ++.+|||+|||+|.++..+++.+ .+++|+|+|+.+++.|++++..++++ ++++++
T Consensus 13 ~~~~~~~~l~~~l~~~--~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 90 (217)
T 3jwh_A 13 LNQQRMNGVVAALKQS--NARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQ 90 (217)
T ss_dssp HHHHHHHHHHHHHHHT--TCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHHHhc--CCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEe
Confidence 3444455565555433 36799999999999999999865 49999999999999999999887775 699999
Q ss_pred CchhchhhhcCCCCCCCcEEEECCCCCCcc----HHHHHHHHh-CCCCcEEEEeeCccc---------------------
Q 043853 122 GDLNKIGGDFGNAFPKPDIVISDPNRPGMH----MKLIKFLLK-LKAPRIVYVSCNPAT--------------------- 175 (222)
Q Consensus 122 ~d~~~~~~~~~~~~~~fD~ii~~pp~~~~~----~~~~~~l~~-l~~~~~v~~~~~~~~--------------------- 175 (222)
+|+...... .+.||+|++.....-+. ..+++.+.+ ++|+|++++..+...
T Consensus 91 ~d~~~~~~~----~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (217)
T 3jwh_A 91 GALTYQDKR----FHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFEW 166 (217)
T ss_dssp CCTTSCCGG----GCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC-----------CCSCB
T ss_pred CCccccccc----CCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccchhhccccccccccccccccc
Confidence 998654332 24799999876422111 345555544 789997765543211
Q ss_pred hHhhHH----HhhccCCCCccCCCeEEeEeeeeccCCCCCceeEEEEEE
Q 043853 176 CARDLD----YLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLLE 220 (222)
Q Consensus 176 ~~~~~~----~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~~~~ 220 (222)
...++. .+++ ..||++.....-+..|.......+..|.
T Consensus 167 ~~~~l~~~~~~~~~-------~~Gf~v~~~~~g~~~~~~g~~~q~~~~~ 208 (217)
T 3jwh_A 167 TRSQFQNWANKITE-------RFAYNVQFQPIGEADPEVGSPTQMAVFI 208 (217)
T ss_dssp CHHHHHHHHHHHHH-------HSSEEEEECCCSCCCSSSCCSEEEEEEE
T ss_pred CHHHHHHHHHHHHH-------HcCceEEEEecCCccCCCCchheeEeee
Confidence 111122 3332 5689888876666666666555555543
No 63
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.59 E-value=6.7e-14 Score=113.06 Aligned_cols=145 Identities=17% Similarity=0.122 Sum_probs=104.2
Q ss_pred CCCCeEEEEecccchhHHHHhhc--CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEE
Q 043853 66 DGSEIVLDLFCGTGTIGLTLARW--VKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVIS 143 (222)
Q Consensus 66 ~~~~~vlDlg~G~G~~~~~la~~--~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~ 143 (222)
.++.+|||+|||+|..++.++.. ..+|+++|+|+.+++.|++|++.+++++++++++|+.++..... ..+.||+|++
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~-~~~~fD~I~s 157 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAG-HREAYARAVA 157 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTT-TTTCEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccc-cCCCceEEEE
Confidence 35789999999999999999876 45999999999999999999999999889999999988754210 1247999999
Q ss_pred CCCCCCccHHHHHHHHh-CCCCcEEEEeeCc--cchHhhHHHhhccCCCCccCCCeEEeEeeeeccCCCCCceeEEEEEE
Q 043853 144 DPNRPGMHMKLIKFLLK-LKAPRIVYVSCNP--ATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLLE 220 (222)
Q Consensus 144 ~pp~~~~~~~~~~~l~~-l~~~~~v~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~~~~ 220 (222)
..-. . ...+++.+.. ++++|.+++.... ......+....+ ..|+++.....+ ..|.......+.++.
T Consensus 158 ~a~~-~-~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~-------~~G~~~~~~~~~-~~p~~~~~R~l~~~~ 227 (249)
T 3g89_A 158 RAVA-P-LCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALE-------RLGGRLGEVLAL-QLPLSGEARHLVVLE 227 (249)
T ss_dssp ESSC-C-HHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHH-------HHTEEEEEEEEE-ECTTTCCEEEEEEEE
T ss_pred CCcC-C-HHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHH-------HcCCeEEEEEEe-eCCCCCCcEEEEEEE
Confidence 7431 2 3566666544 7898887654432 222222322221 458888888877 467766666666665
Q ss_pred e
Q 043853 221 L 221 (222)
Q Consensus 221 ~ 221 (222)
+
T Consensus 228 k 228 (249)
T 3g89_A 228 K 228 (249)
T ss_dssp E
T ss_pred e
Confidence 4
No 64
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.59 E-value=2.8e-14 Score=117.24 Aligned_cols=155 Identities=14% Similarity=0.093 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCC-eEEEEeC-CHHHHHHHHHHH-----HHcCCC-----c
Q 043853 49 QAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVK-HVYGYEV-VPQAISDACRNA-----KLNNIS-----N 116 (222)
Q Consensus 49 ~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~-~v~gvD~-~~~~i~~a~~n~-----~~~~~~-----~ 116 (222)
.++.+.+++....... ++.+|||+|||+|.+++.+++.+. +|+|+|+ |+.+++.|++|+ +.+++. +
T Consensus 63 ~~~~l~~~l~~~~~~~--~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~ 140 (281)
T 3bzb_A 63 GARALADTLCWQPELI--AGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRAS 140 (281)
T ss_dssp HHHHHHHHHHHCGGGT--TTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CC
T ss_pred HHHHHHHHHHhcchhc--CCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCC
Confidence 3556667776654322 367999999999999999888665 9999999 899999999999 555553 5
Q ss_pred EEEEeCchhchhhhcCC--CCCCCcEEEE-CCCC-CCccHHHHHHHHh-CC---C--CcEEEEeeCccc------hHhhH
Q 043853 117 ATFVQGDLNKIGGDFGN--AFPKPDIVIS-DPNR-PGMHMKLIKFLLK-LK---A--PRIVYVSCNPAT------CARDL 180 (222)
Q Consensus 117 v~~~~~d~~~~~~~~~~--~~~~fD~ii~-~pp~-~~~~~~~~~~l~~-l~---~--~~~v~~~~~~~~------~~~~~ 180 (222)
+++...|+.+....+.. ....||+|++ +... ......+++.+.. ++ + +|.+++.+.+.. ....+
T Consensus 141 v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~~~~~~~~~~ 220 (281)
T 3bzb_A 141 PKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTHHRPHLAERDLAFF 220 (281)
T ss_dssp CEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC--------CTHHH
T ss_pred eEEEEecCCCccHHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeecccchhHHHHH
Confidence 88886665443221110 1247999987 5543 2234566666655 77 8 998877665532 12223
Q ss_pred HHhhccCCCCccCCC-eEEeEe----eeeccCCCCCce
Q 043853 181 DYLCHGVGDQNIKGC-YKLKSL----QPVDMFPHTPHI 213 (222)
Q Consensus 181 ~~l~~~~~~~~~~~~-~~~~~~----~~~~~~p~~~~~ 213 (222)
..+. +.| |++..+ ....+||.+.+.
T Consensus 221 ~~l~--------~~G~f~v~~~~~~~~~~~~f~~~~~~ 250 (281)
T 3bzb_A 221 RLVN--------ADGALIAEPWLSPLQMDPMFPDDPGD 250 (281)
T ss_dssp HHHH--------HSTTEEEEEEECCC------------
T ss_pred HHHH--------hcCCEEEEEeccccccccccccCCcc
Confidence 3332 567 888776 334567766554
No 65
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.59 E-value=1.9e-14 Score=113.82 Aligned_cols=103 Identities=15% Similarity=0.071 Sum_probs=83.0
Q ss_pred CCeEEEEecccchhHHHHhhc---CCeEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhhhcCCCC-CCCcEEE
Q 043853 68 SEIVLDLFCGTGTIGLTLARW---VKHVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGDFGNAF-PKPDIVI 142 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~---~~~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~~~~~-~~fD~ii 142 (222)
+.+|||+|||+|..++.+++. ..+++++|+++.+++.|++++...++++ ++++++|+.+....+.... ..||+|+
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v~ 138 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFIF 138 (223)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEEE
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEEE
Confidence 689999999999999999986 5699999999999999999999999876 9999999987654432111 4699999
Q ss_pred ECCCCCCccHHHHHH-HHhCCCCcEEEEee
Q 043853 143 SDPNRPGMHMKLIKF-LLKLKAPRIVYVSC 171 (222)
Q Consensus 143 ~~pp~~~~~~~~~~~-l~~l~~~~~v~~~~ 171 (222)
++++.... ..+++. .+.++|+|++++..
T Consensus 139 ~d~~~~~~-~~~l~~~~~~L~pgG~lv~~~ 167 (223)
T 3duw_A 139 IDADKQNN-PAYFEWALKLSRPGTVIIGDN 167 (223)
T ss_dssp ECSCGGGH-HHHHHHHHHTCCTTCEEEEES
T ss_pred EcCCcHHH-HHHHHHHHHhcCCCcEEEEeC
Confidence 99885544 444444 45589999888654
No 66
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.58 E-value=5.3e-14 Score=112.74 Aligned_cols=144 Identities=13% Similarity=0.068 Sum_probs=102.0
Q ss_pred CCCeEEEEecccchhHHHHhh--cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEEC
Q 043853 67 GSEIVLDLFCGTGTIGLTLAR--WVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISD 144 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~--~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~ 144 (222)
++.+|||+|||+|..++.++. ...+++|+|+|+.+++.|+++++.+++++++++++|+.++..... ..+.||+|++.
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~-~~~~fD~V~~~ 148 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKD-VRESYDIVTAR 148 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTT-TTTCEEEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhccccc-ccCCccEEEEe
Confidence 467999999999999998885 356999999999999999999999999889999999988653110 12479999997
Q ss_pred CCCCCccHHHHHHHH-hCCCCcEEEEeeCccch--HhhHHHhhccCCCCccCCCeEEeEeeeeccCCCCCceeEEEEEEe
Q 043853 145 PNRPGMHMKLIKFLL-KLKAPRIVYVSCNPATC--ARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLLEL 221 (222)
Q Consensus 145 pp~~~~~~~~~~~l~-~l~~~~~v~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~~~~~ 221 (222)
.. .. ...+++.+. .++|+|.+++....... ...+....+ ..|+++.....+. +|.......+.++++
T Consensus 149 ~~-~~-~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~-------~~g~~~~~~~~~~-~~~~~~~~~l~~~~k 218 (240)
T 1xdz_A 149 AV-AR-LSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAIT-------TLGGELENIHSFK-LPIEESDRNIMVIRK 218 (240)
T ss_dssp CC-SC-HHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHH-------HTTEEEEEEEEEE-CTTTCCEEEEEEEEE
T ss_pred cc-CC-HHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHH-------HcCCeEeEEEEEe-cCCCCCceEEEEEEe
Confidence 63 22 356666664 47899998876543221 112222221 5688888777654 666555555555543
No 67
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.58 E-value=4.3e-14 Score=123.14 Aligned_cols=126 Identities=19% Similarity=0.230 Sum_probs=92.7
Q ss_pred CCCCeEEEEecccchhHHHHhhc---CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEE
Q 043853 66 DGSEIVLDLFCGTGTIGLTLARW---VKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVI 142 (222)
Q Consensus 66 ~~~~~vlDlg~G~G~~~~~la~~---~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii 142 (222)
.++.+|||+|||+|+.++.+|.. ...|+|+|+|+.+++.+++|++.+|++++.++++|+.++..... +.||.|+
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~---~~FD~Il 180 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFS---GFFDRIV 180 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHT---TCEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhcc---ccCCEEE
Confidence 35789999999999999988864 35899999999999999999999999899999999988764322 4799999
Q ss_pred ECCCCCCcc------------------------HHHHHHHH-hCCCCcEE-EEeeC--ccchHhhHHHhhccCCCCccCC
Q 043853 143 SDPNRPGMH------------------------MKLIKFLL-KLKAPRIV-YVSCN--PATCARDLDYLCHGVGDQNIKG 194 (222)
Q Consensus 143 ~~pp~~~~~------------------------~~~~~~l~-~l~~~~~v-~~~~~--~~~~~~~~~~l~~~~~~~~~~~ 194 (222)
+|||+++.. ..+++.+. .++|+|.+ |.+|. +..-...+..+++ .+
T Consensus 181 ~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEne~vv~~~l~-------~~ 253 (456)
T 3m4x_A 181 VDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEENEEIISWLVE-------NY 253 (456)
T ss_dssp EECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGGGTHHHHHHHHH-------HS
T ss_pred ECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccccCHHHHHHHHH-------hC
Confidence 999965432 13333333 36887765 55553 4444455555553 33
Q ss_pred CeEEeEe
Q 043853 195 CYKLKSL 201 (222)
Q Consensus 195 ~~~~~~~ 201 (222)
++++..+
T Consensus 254 ~~~l~~~ 260 (456)
T 3m4x_A 254 PVTIEEI 260 (456)
T ss_dssp SEEEECC
T ss_pred CCEEEec
Confidence 4665554
No 68
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.58 E-value=3.8e-14 Score=114.32 Aligned_cols=103 Identities=17% Similarity=0.148 Sum_probs=83.4
Q ss_pred CCeEEEEecccchhHHHHhhc---CCeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEeCchhchhhhcCCCCCCCcEEEE
Q 043853 68 SEIVLDLFCGTGTIGLTLARW---VKHVYGYEVVPQAISDACRNAKLNNIS-NATFVQGDLNKIGGDFGNAFPKPDIVIS 143 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~---~~~v~gvD~~~~~i~~a~~n~~~~~~~-~v~~~~~d~~~~~~~~~~~~~~fD~ii~ 143 (222)
+.+|||+|||+|..++.+++. ..+++++|+|+.+++.|+++++..+++ +++++.+|+.+....+. ....||+|++
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~-~~~~fD~V~~ 142 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLG-ECPAFDLIFI 142 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCC-SCCCCSEEEE
T ss_pred CCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcC-CCCCeEEEEE
Confidence 689999999999999999986 569999999999999999999999987 59999999988655432 2247999999
Q ss_pred CCCCCCccHHHHHHHHhCCCCcEEEEee
Q 043853 144 DPNRPGMHMKLIKFLLKLKAPRIVYVSC 171 (222)
Q Consensus 144 ~pp~~~~~~~~~~~l~~l~~~~~v~~~~ 171 (222)
+.+.......+....+.++|+|+++++.
T Consensus 143 d~~~~~~~~~l~~~~~~LkpGG~lv~~~ 170 (248)
T 3tfw_A 143 DADKPNNPHYLRWALRYSRPGTLIIGDN 170 (248)
T ss_dssp CSCGGGHHHHHHHHHHTCCTTCEEEEEC
T ss_pred CCchHHHHHHHHHHHHhcCCCeEEEEeC
Confidence 9875544333333445589999888654
No 69
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.58 E-value=8.9e-14 Score=110.34 Aligned_cols=119 Identities=14% Similarity=0.132 Sum_probs=87.7
Q ss_pred CCCeEEEEecccchhHHHHhhcCC--eEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhhhcCCCCCCCcEEEE
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVK--HVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGDFGNAFPKPDIVIS 143 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~--~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~~~~~~~fD~ii~ 143 (222)
++.+|+|+|||+|.+++.+++.++ +|+|+|+|+.+++.|++|++.+++++ +++..+|+.+.... .++||+|++
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~----~~~~D~Ivi 90 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE----TDQVSVITI 90 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG----GGCCCEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhccc----CcCCCEEEE
Confidence 578999999999999999998764 89999999999999999999999975 99999999765432 126998876
Q ss_pred CCCCCCccHH----HHHHHH-hCCCCcEEEEeeCccchHhhHHHhhccCCCCccCCCeEEeEee
Q 043853 144 DPNRPGMHMK----LIKFLL-KLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQ 202 (222)
Q Consensus 144 ~pp~~~~~~~----~~~~l~-~l~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 202 (222)
. ++... +++... .+++++.++++.. +-...+...+. ++||.+..-.
T Consensus 91 a----G~Gg~~i~~Il~~~~~~L~~~~~lVlq~~--~~~~~vr~~L~-------~~Gf~i~~e~ 141 (225)
T 3kr9_A 91 A----GMGGRLIARILEEGLGKLANVERLILQPN--NREDDLRIWLQ-------DHGFQIVAES 141 (225)
T ss_dssp E----EECHHHHHHHHHHTGGGCTTCCEEEEEES--SCHHHHHHHHH-------HTTEEEEEEE
T ss_pred c----CCChHHHHHHHHHHHHHhCCCCEEEEECC--CCHHHHHHHHH-------HCCCEEEEEE
Confidence 3 33333 333322 3678888887765 33444443332 6788777644
No 70
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.57 E-value=3.7e-14 Score=119.70 Aligned_cols=164 Identities=21% Similarity=0.171 Sum_probs=107.4
Q ss_pred CccccCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcC-------CeEEEEeCCHHHHHHHHHHHHHc
Q 043853 40 NSFFQTNTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWV-------KHVYGYEVVPQAISDACRNAKLN 112 (222)
Q Consensus 40 ~~f~~~~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~-------~~v~gvD~~~~~i~~a~~n~~~~ 112 (222)
+.|| ++......+...+..+.. +.++.+|||+|||+|.+++.+++.. .+++|+|+++.+++.|+.|+..+
T Consensus 106 g~~~-TP~~i~~~~~~ll~~l~~--~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~ 182 (344)
T 2f8l_A 106 NHQM-TPDSIGFIVAYLLEKVIQ--KKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQ 182 (344)
T ss_dssp GGCC-CCHHHHHHHHHHHHHHHT--TCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHH
T ss_pred CcCC-ChHHHHHHHHHHHHHhcC--CCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhC
Confidence 3444 334444443333333222 1246799999999999999887643 58999999999999999999988
Q ss_pred CCCcEEEEeCchhchhhhcCCCCCCCcEEEECCCCCCc--------------------cHHHHHH-HHhCCCCcEEEEee
Q 043853 113 NISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGM--------------------HMKLIKF-LLKLKAPRIVYVSC 171 (222)
Q Consensus 113 ~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~~~--------------------~~~~~~~-l~~l~~~~~v~~~~ 171 (222)
++ ++++.++|..+... ...||+|++|||.... ...++.. +..++++|.+.+.+
T Consensus 183 g~-~~~i~~~D~l~~~~-----~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~ 256 (344)
T 2f8l_A 183 RQ-KMTLLHQDGLANLL-----VDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLV 256 (344)
T ss_dssp TC-CCEEEESCTTSCCC-----CCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CC-CceEEECCCCCccc-----cCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEE
Confidence 88 68999999876431 2479999999993111 0134444 44578888876555
Q ss_pred -----CccchHhhHH-HhhccCCCCccCCCeEEe-EeeeeccCCCCCceeEEEEEEe
Q 043853 172 -----NPATCARDLD-YLCHGVGDQNIKGCYKLK-SLQPVDMFPHTPHIECVCLLEL 221 (222)
Q Consensus 172 -----~~~~~~~~~~-~l~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~v~~~~~ 221 (222)
.... ...+. .+. +.++... -.-+-++|+.+....+|.+|.+
T Consensus 257 p~~~~~~~~-~~~ir~~l~--------~~~~~~~ii~lp~~~F~~~~~~~~i~vl~k 304 (344)
T 2f8l_A 257 PDAMFGTSD-FAKVDKFIK--------KNGHIEGIIKLPETLFKSEQARKSILILEK 304 (344)
T ss_dssp EGGGGGSTT-HHHHHHHHH--------HHEEEEEEEECCGGGSCC-CCCEEEEEEEE
T ss_pred CchhcCCch-HHHHHHHHH--------hCCeEEEeeeCChhhccCCCCceEEEEEEC
Confidence 2222 23333 332 3444322 2235578999889999999876
No 71
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.57 E-value=1.1e-14 Score=114.38 Aligned_cols=141 Identities=17% Similarity=0.140 Sum_probs=104.6
Q ss_pred HHHHHhcCCCCCCCeEEEEecccchhHHHHhhcC---CeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcC
Q 043853 56 LIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWV---KHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFG 132 (222)
Q Consensus 56 ~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~---~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~ 132 (222)
.+.+.+... ++.+|||+|||+|.++..+++.. .+++++|+|+.+++.|++++...+.+++++..+|+......
T Consensus 68 ~~~~~~~~~--~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-- 143 (215)
T 2yxe_A 68 MMCELLDLK--PGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEP-- 143 (215)
T ss_dssp HHHHHTTCC--TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGG--
T ss_pred HHHHhhCCC--CCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCC--
Confidence 344444333 47899999999999999988764 69999999999999999999998888899999998654321
Q ss_pred CCCCCCcEEEECCCCCCccHHHHHHHHhCCCCcEEEEeeCccchHhhHHHhhccCCCCccCCCeEEeEeeeeccCCCCCc
Q 043853 133 NAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPH 212 (222)
Q Consensus 133 ~~~~~fD~ii~~pp~~~~~~~~~~~l~~l~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 212 (222)
...||+|+++.+...+.. .....++++|.+++.+.+.. ..+..+.+ ...+|....+.+..++|..++
T Consensus 144 --~~~fD~v~~~~~~~~~~~---~~~~~L~pgG~lv~~~~~~~--~~~~~~~~------~~~~~~~~~~~~~~~~p~~~~ 210 (215)
T 2yxe_A 144 --LAPYDRIYTTAAGPKIPE---PLIRQLKDGGKLLMPVGRYL--QRLVLAEK------RGDEIIIKDCGPVAFVPLVGK 210 (215)
T ss_dssp --GCCEEEEEESSBBSSCCH---HHHHTEEEEEEEEEEESSSS--EEEEEEEE------ETTEEEEEEEEEECCCBCBST
T ss_pred --CCCeeEEEECCchHHHHH---HHHHHcCCCcEEEEEECCCC--cEEEEEEE------eCCEEEEEEeccEEEEecccc
Confidence 247999999986544443 33445789999998887653 33333321 134688888888888898775
Q ss_pred e
Q 043853 213 I 213 (222)
Q Consensus 213 ~ 213 (222)
.
T Consensus 211 ~ 211 (215)
T 2yxe_A 211 E 211 (215)
T ss_dssp T
T ss_pred c
Confidence 3
No 72
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.57 E-value=2.8e-14 Score=115.07 Aligned_cols=112 Identities=21% Similarity=0.178 Sum_probs=87.1
Q ss_pred HHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhc---CCeEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhh
Q 043853 54 YKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARW---VKHVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGG 129 (222)
Q Consensus 54 ~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~---~~~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~ 129 (222)
...+...+... ++.+|||+|||+|.++..+++. ..+++++|+|+.+++.|+++++.+++++ ++++++|+.+...
T Consensus 82 ~~~i~~~~~~~--~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 159 (255)
T 3mb5_A 82 AALIVAYAGIS--PGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIE 159 (255)
T ss_dssp HHHHHHHTTCC--TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCC
T ss_pred HHHHHHhhCCC--CCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccC
Confidence 34455555433 4789999999999999999887 5699999999999999999999999877 9999999986532
Q ss_pred hcCCCCCCCcEEEECCCCCCccHHHHHHHHhCCCCcEEEEeeCcc
Q 043853 130 DFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPA 174 (222)
Q Consensus 130 ~~~~~~~~fD~ii~~pp~~~~~~~~~~~l~~l~~~~~v~~~~~~~ 174 (222)
...||+|++++|.. ..-+....+.++|+|.+++.+...
T Consensus 160 -----~~~~D~v~~~~~~~--~~~l~~~~~~L~~gG~l~~~~~~~ 197 (255)
T 3mb5_A 160 -----EENVDHVILDLPQP--ERVVEHAAKALKPGGFFVAYTPCS 197 (255)
T ss_dssp -----CCSEEEEEECSSCG--GGGHHHHHHHEEEEEEEEEEESSH
T ss_pred -----CCCcCEEEECCCCH--HHHHHHHHHHcCCCCEEEEEECCH
Confidence 24799999999844 222333344578999988776543
No 73
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.57 E-value=1e-14 Score=118.62 Aligned_cols=112 Identities=17% Similarity=0.196 Sum_probs=82.6
Q ss_pred HHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcC----CeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEeCchhchh
Q 043853 54 YKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWV----KHVYGYEVVPQAISDACRNAKLNNIS-NATFVQGDLNKIG 128 (222)
Q Consensus 54 ~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~----~~v~gvD~~~~~i~~a~~n~~~~~~~-~v~~~~~d~~~~~ 128 (222)
.+.+..++....+++.+|||+|||+|.+++.+++.. .+++|+|+|+.|++.|+++++..+.. +++++++|+.+++
T Consensus 57 ~~~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~ 136 (261)
T 4gek_A 57 ISMIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIA 136 (261)
T ss_dssp HHHHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCC
T ss_pred HHHHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccc
Confidence 344444443333468899999999999999998753 38999999999999999999987765 5999999998865
Q ss_pred hhcCCCCCCCcEEEECCCCCCc----cHHHHHHH-HhCCCCcEEEEee
Q 043853 129 GDFGNAFPKPDIVISDPNRPGM----HMKLIKFL-LKLKAPRIVYVSC 171 (222)
Q Consensus 129 ~~~~~~~~~fD~ii~~pp~~~~----~~~~~~~l-~~l~~~~~v~~~~ 171 (222)
. +.||+|+++-.-.-+ ...+++.+ +.|+|||.++++.
T Consensus 137 ~------~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e 178 (261)
T 4gek_A 137 I------ENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSE 178 (261)
T ss_dssp C------CSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred c------cccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEe
Confidence 3 369999887531111 12344444 4489999988764
No 74
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.57 E-value=3.8e-14 Score=115.92 Aligned_cols=130 Identities=14% Similarity=0.043 Sum_probs=94.1
Q ss_pred HHHHHhcCCCCCCCeEEEEecccchhHHHHhhc---CCeEEEEeCCHHHHHHHHHHHHHc-CCCcEEEEeCchhchhhhc
Q 043853 56 LIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARW---VKHVYGYEVVPQAISDACRNAKLN-NISNATFVQGDLNKIGGDF 131 (222)
Q Consensus 56 ~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~---~~~v~gvD~~~~~i~~a~~n~~~~-~~~~v~~~~~d~~~~~~~~ 131 (222)
.+...+.. .++.+|||+|||+|.++..+++. ..+++|+|+++.+++.|+++++.+ +.+++++.++|+.+...
T Consensus 101 ~~~~~~~~--~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~-- 176 (275)
T 1yb2_A 101 YIIMRCGL--RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFIS-- 176 (275)
T ss_dssp -----CCC--CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCC--
T ss_pred HHHHHcCC--CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCc--
Confidence 44444433 34789999999999999999876 569999999999999999999988 87789999999987322
Q ss_pred CCCCCCCcEEEECCCCCCccHHHHHHHH-hCCCCcEEEEeeCccchHhhHHHhhccCCCCccCCCeEEeEee
Q 043853 132 GNAFPKPDIVISDPNRPGMHMKLIKFLL-KLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQ 202 (222)
Q Consensus 132 ~~~~~~fD~ii~~pp~~~~~~~~~~~l~-~l~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 202 (222)
.+.||+|++++|.. ..+++.+. .++|+|.+++.+.......++..... +.||......
T Consensus 177 ---~~~fD~Vi~~~~~~---~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~-------~~Gf~~~~~~ 235 (275)
T 1yb2_A 177 ---DQMYDAVIADIPDP---WNHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLS-------ASGMHHLETV 235 (275)
T ss_dssp ---SCCEEEEEECCSCG---GGSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSG-------GGTEEEEEEE
T ss_pred ---CCCccEEEEcCcCH---HHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHH-------HCCCeEEEEE
Confidence 24799999998743 24445444 47899999888876544444433322 4577666544
No 75
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.56 E-value=2.1e-14 Score=113.78 Aligned_cols=163 Identities=14% Similarity=0.086 Sum_probs=109.8
Q ss_pred ecCeeEEEcCCccccCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCC-------eEEEEeCCHHHH
Q 043853 30 LRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVK-------HVYGYEVVPQAI 102 (222)
Q Consensus 30 ~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~-------~v~gvD~~~~~i 102 (222)
+++..+.+..+.... .+.....+.+ .+.....++.+|||+|||+|.++..+++... +++++|+++.++
T Consensus 48 y~d~~~~~~~~~~~~-~p~~~~~~~~----~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~ 122 (227)
T 2pbf_A 48 YIDTPVYISHGVTIS-APHMHALSLK----RLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLV 122 (227)
T ss_dssp TSSSCEEEETTEEEC-CHHHHHHHHH----HHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHH
T ss_pred CCCCccccCCCCccC-ChHHHHHHHH----HHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHH
Confidence 344455555554333 2333333333 3321123478999999999999999988653 999999999999
Q ss_pred HHHHHHHHHcC-----CCcEEEEeCchhchh----hhcCCCCCCCcEEEECCCCCCccHHHHHHHHhCCCCcEEEEeeCc
Q 043853 103 SDACRNAKLNN-----ISNATFVQGDLNKIG----GDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNP 173 (222)
Q Consensus 103 ~~a~~n~~~~~-----~~~v~~~~~d~~~~~----~~~~~~~~~fD~ii~~pp~~~~~~~~~~~l~~l~~~~~v~~~~~~ 173 (222)
+.|+++++.++ .++++++.+|+.+.. .. ...||+|+++.+...+...+ ...++++|.+++.+.+
T Consensus 123 ~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~----~~~fD~I~~~~~~~~~~~~~---~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 123 NFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKE----LGLFDAIHVGASASELPEIL---VDLLAENGKLIIPIEE 195 (227)
T ss_dssp HHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHH----HCCEEEEEECSBBSSCCHHH---HHHEEEEEEEEEEEEE
T ss_pred HHHHHHHHHcCccccccCCEEEEECChHhcccccCcc----CCCcCEEEECCchHHHHHHH---HHhcCCCcEEEEEEcc
Confidence 99999999887 567999999998753 21 14799999998765554333 3446899998888754
Q ss_pred cchHhhHHHhhccCCCCccCCCeEEeEeeeeccCCCCC
Q 043853 174 ATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTP 211 (222)
Q Consensus 174 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 211 (222)
... ..+..+.+ .+++|....+..+.++|.+.
T Consensus 196 ~~~-~~~~~~~~------~~~~~~~~~~~~~~~~pl~~ 226 (227)
T 2pbf_A 196 DYT-QVLYEITK------KNGKIIKDRLFDVCFVSLKK 226 (227)
T ss_dssp TTE-EEEEEEEC------SCC-CEEEEEEEECCCBCCC
T ss_pred CCc-eEEEEEEE------eCCeEEEEEeccEEEEeccC
Confidence 211 11111110 25678888898999998764
No 76
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.56 E-value=2.5e-14 Score=114.21 Aligned_cols=98 Identities=16% Similarity=0.101 Sum_probs=82.0
Q ss_pred CCeEEEEecccchhHHHHhh--cCCeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEeCchhchhh-hcCCCCCCCcEEEE
Q 043853 68 SEIVLDLFCGTGTIGLTLAR--WVKHVYGYEVVPQAISDACRNAKLNNIS-NATFVQGDLNKIGG-DFGNAFPKPDIVIS 143 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~--~~~~v~gvD~~~~~i~~a~~n~~~~~~~-~v~~~~~d~~~~~~-~~~~~~~~fD~ii~ 143 (222)
+.+|||+|||+|..++.+++ ...+++++|+++.+++.|+++++..+++ +++++.+|+.+... .+ .+.||+|++
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~---~~~fD~V~~ 148 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVN---DKVYDMIFI 148 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHT---TSCEEEEEE
T ss_pred CCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhc---cCCccEEEE
Confidence 68999999999999999998 3569999999999999999999999986 69999999988655 33 248999999
Q ss_pred CCCCCCccHHHHHHH-HhCCCCcEEEE
Q 043853 144 DPNRPGMHMKLIKFL-LKLKAPRIVYV 169 (222)
Q Consensus 144 ~pp~~~~~~~~~~~l-~~l~~~~~v~~ 169 (222)
+.+.... ..+++.+ +.++|+|++++
T Consensus 149 ~~~~~~~-~~~l~~~~~~LkpgG~lv~ 174 (232)
T 3ntv_A 149 DAAKAQS-KKFFEIYTPLLKHQGLVIT 174 (232)
T ss_dssp ETTSSSH-HHHHHHHGGGEEEEEEEEE
T ss_pred cCcHHHH-HHHHHHHHHhcCCCeEEEE
Confidence 9876554 4555555 45899999887
No 77
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.56 E-value=2.4e-14 Score=113.28 Aligned_cols=104 Identities=13% Similarity=0.056 Sum_probs=82.9
Q ss_pred CCeEEEEecccchhHHHHhhc---CCeEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhhhcCCCC--CCCcEE
Q 043853 68 SEIVLDLFCGTGTIGLTLARW---VKHVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGDFGNAF--PKPDIV 141 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~---~~~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~~~~~--~~fD~i 141 (222)
+.+|||+|||+|..++.+++. ..+++++|+++.+++.|+++++..++++ ++++++|+.+....+.... +.||+|
T Consensus 65 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v 144 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLI 144 (225)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEEE
T ss_pred CCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccEE
Confidence 679999999999999999986 5699999999999999999999999875 9999999987654432111 479999
Q ss_pred EECCCCCCccHHHHHHHHhCCCCcEEEEee
Q 043853 142 ISDPNRPGMHMKLIKFLLKLKAPRIVYVSC 171 (222)
Q Consensus 142 i~~pp~~~~~~~~~~~l~~l~~~~~v~~~~ 171 (222)
+++++......-+....+.++|+|+++++.
T Consensus 145 ~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~ 174 (225)
T 3tr6_A 145 YIDADKANTDLYYEESLKLLREGGLIAVDN 174 (225)
T ss_dssp EECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EECCCHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 999885544333333445589999988654
No 78
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.55 E-value=2.1e-13 Score=108.48 Aligned_cols=119 Identities=16% Similarity=0.102 Sum_probs=88.7
Q ss_pred CCCeEEEEecccchhHHHHhhcCC--eEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhhhcCCCCCCCcEEEE
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVK--HVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGDFGNAFPKPDIVIS 143 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~--~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~~~~~~~fD~ii~ 143 (222)
++.+|+|+|||+|.+++.+++.++ +|+|+|+++.+++.|++|++.+++++ +++.++|+.+.... .+.||+|++
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~----~~~~D~Ivi 96 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEE----ADNIDTITI 96 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG----GGCCCEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcccc----ccccCEEEE
Confidence 478999999999999999998764 89999999999999999999999976 99999999887542 126999875
Q ss_pred CCCCCCccHHHHHHHH-----hCCCCcEEEEeeCccchHhhHHHhhccCCCCccCCCeEEeEee
Q 043853 144 DPNRPGMHMKLIKFLL-----KLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQ 202 (222)
Q Consensus 144 ~pp~~~~~~~~~~~l~-----~l~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 202 (222)
.++...++..+. .+++++.++++... -...+...+. ++||.+..-.
T Consensus 97 ----aGmGg~lI~~IL~~~~~~l~~~~~lIlqp~~--~~~~lr~~L~-------~~Gf~i~~E~ 147 (230)
T 3lec_A 97 ----CGMGGRLIADILNNDIDKLQHVKTLVLQPNN--REDDLRKWLA-------ANDFEIVAED 147 (230)
T ss_dssp ----EEECHHHHHHHHHHTGGGGTTCCEEEEEESS--CHHHHHHHHH-------HTTEEEEEEE
T ss_pred ----eCCchHHHHHHHHHHHHHhCcCCEEEEECCC--ChHHHHHHHH-------HCCCEEEEEE
Confidence 244444333322 26777888877653 2444443332 6778777644
No 79
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.55 E-value=6.2e-14 Score=110.92 Aligned_cols=105 Identities=14% Similarity=0.156 Sum_probs=82.1
Q ss_pred CCeEEEEecccchhHHHHhhc---CCeEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhhhcCC--CCCCCcEE
Q 043853 68 SEIVLDLFCGTGTIGLTLARW---VKHVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGDFGN--AFPKPDIV 141 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~---~~~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~~~--~~~~fD~i 141 (222)
+.+|||+|||+|..++.+++. ..+++++|+++.+++.|++|++.+++++ ++++++|+.+....+.. ..+.||+|
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V 138 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMV 138 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEEE
Confidence 679999999999999999874 4599999999999999999999999874 99999999886554321 11479999
Q ss_pred EECCCCCCccH--HHHHHHHhCCCCcEEEEeeC
Q 043853 142 ISDPNRPGMHM--KLIKFLLKLKAPRIVYVSCN 172 (222)
Q Consensus 142 i~~pp~~~~~~--~~~~~l~~l~~~~~v~~~~~ 172 (222)
+++.+...... .+++.++.++|+|+++++..
T Consensus 139 ~~d~~~~~~~~~~~~~~~~~~LkpgG~lv~~~~ 171 (221)
T 3u81_A 139 FLDHWKDRYLPDTLLLEKCGLLRKGTVLLADNV 171 (221)
T ss_dssp EECSCGGGHHHHHHHHHHTTCCCTTCEEEESCC
T ss_pred EEcCCcccchHHHHHHHhccccCCCeEEEEeCC
Confidence 99986443322 23333345899999887653
No 80
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.55 E-value=1e-12 Score=108.10 Aligned_cols=105 Identities=11% Similarity=0.092 Sum_probs=81.3
Q ss_pred HHhcCCCCCCCeEEEEecccchhHH-HHhh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCC
Q 043853 59 DCAGLRDDGSEIVLDLFCGTGTIGL-TLAR-WVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFP 136 (222)
Q Consensus 59 ~~~~~~~~~~~~vlDlg~G~G~~~~-~la~-~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 136 (222)
.++.+. ++++|||+|||+|.++. .+|+ .+.+|+|+|+|+.+++.|+++++..++++++++++|+.+++. +
T Consensus 116 ~la~l~--~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~d------~ 187 (298)
T 3fpf_A 116 ALGRFR--RGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVIDG------L 187 (298)
T ss_dssp HHTTCC--TTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGGG------C
T ss_pred HHcCCC--CcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCCC------C
Confidence 344444 48999999999998764 5565 367999999999999999999999888779999999988642 4
Q ss_pred CCcEEEECCCCCCccHHHHHHH-HhCCCCcEEEEeeC
Q 043853 137 KPDIVISDPNRPGMHMKLIKFL-LKLKAPRIVYVSCN 172 (222)
Q Consensus 137 ~fD~ii~~pp~~~~~~~~~~~l-~~l~~~~~v~~~~~ 172 (222)
.||+|++.-.... ...+.+.+ +.++|+|.+.+...
T Consensus 188 ~FDvV~~~a~~~d-~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 188 EFDVLMVAALAEP-KRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp CCSEEEECTTCSC-HHHHHHHHHHHCCTTCEEEEEEC
T ss_pred CcCEEEECCCccC-HHHHHHHHHHHcCCCcEEEEEcC
Confidence 8999998754222 24555555 44899999887653
No 81
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.54 E-value=2.4e-14 Score=115.40 Aligned_cols=125 Identities=20% Similarity=0.224 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhc----CCeEEEEeCCHHHHHHHHHHHHHc---CCCc---
Q 043853 47 THQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARW----VKHVYGYEVVPQAISDACRNAKLN---NISN--- 116 (222)
Q Consensus 47 ~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~----~~~v~gvD~~~~~i~~a~~n~~~~---~~~~--- 116 (222)
..++..+++.+.+.+. ..++.+|||+|||+|.+++.+++. ..+++|+|+|+.+++.|++|+..+ ++++
T Consensus 33 ~~la~~l~~~~l~~~~--~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~ 110 (250)
T 1o9g_A 33 VRLATEIFQRALARLP--GDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTAREL 110 (250)
T ss_dssp HHHHHHHHHHHHHTSS--CCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcc--cCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccch
Confidence 4455566666555432 224679999999999999988876 358999999999999999998876 4432
Q ss_pred -----------------------EE-------------EEeCchhchhhhcC-CCCCCCcEEEECCCCCCc---------
Q 043853 117 -----------------------AT-------------FVQGDLNKIGGDFG-NAFPKPDIVISDPNRPGM--------- 150 (222)
Q Consensus 117 -----------------------v~-------------~~~~d~~~~~~~~~-~~~~~fD~ii~~pp~~~~--------- 150 (222)
++ +.++|+.+...... .....||+|+++||....
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~ 190 (250)
T 1o9g_A 111 ERREQSERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPG 190 (250)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCH
T ss_pred hhhhhhhhcccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccc
Confidence 56 99999877542100 011379999999983211
Q ss_pred --cHHHHHHH-HhCCCCcEEEEeeCc
Q 043853 151 --HMKLIKFL-LKLKAPRIVYVSCNP 173 (222)
Q Consensus 151 --~~~~~~~l-~~l~~~~~v~~~~~~ 173 (222)
...+++.+ +.++|+|.+++..+.
T Consensus 191 ~~~~~~l~~~~~~LkpgG~l~~~~~~ 216 (250)
T 1o9g_A 191 QPVAGLLRSLASALPAHAVIAVTDRS 216 (250)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEEEESS
T ss_pred cHHHHHHHHHHHhcCCCcEEEEeCcc
Confidence 12445544 348999999886544
No 82
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.53 E-value=1.2e-13 Score=110.48 Aligned_cols=103 Identities=24% Similarity=0.380 Sum_probs=81.7
Q ss_pred EcCCccccCCHH-HHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCC-
Q 043853 37 ISANSFFQTNTH-QAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNI- 114 (222)
Q Consensus 37 ~~~~~f~~~~~~-~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~- 114 (222)
.+..+|++.++. ....+...+.... ++.+|||+|||+|.+++.+++.+.+++|+|+|+.+++.|++|++.+++
T Consensus 52 ~~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~~~~ 126 (241)
T 3gdh_A 52 LDREGWFSVTPEKIAEHIAGRVSQSF-----KCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNAEVYGIA 126 (241)
T ss_dssp CCHHHHHHCCCHHHHHHHHHHHHHHS-----CCSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCG
T ss_pred ecccceeecCHHHHHHHHHHHhhhcc-----CCCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCC
Confidence 344466655444 3444444444332 378999999999999999998889999999999999999999999998
Q ss_pred CcEEEEeCchhchhhhcCCCCCCCcEEEECCCCCC
Q 043853 115 SNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPG 149 (222)
Q Consensus 115 ~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~~ 149 (222)
++++++++|+.++... ..||+|+++||...
T Consensus 127 ~~~~~~~~d~~~~~~~-----~~~D~v~~~~~~~~ 156 (241)
T 3gdh_A 127 DKIEFICGDFLLLASF-----LKADVVFLSPPWGG 156 (241)
T ss_dssp GGEEEEESCHHHHGGG-----CCCSEEEECCCCSS
T ss_pred cCeEEEECChHHhccc-----CCCCEEEECCCcCC
Confidence 4799999999887632 48999999998543
No 83
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.53 E-value=3.4e-13 Score=110.45 Aligned_cols=102 Identities=16% Similarity=0.182 Sum_probs=81.2
Q ss_pred CCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCC-CcEEEEeCchhchhhhcCCCCCCCcEEEECC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNI-SNATFVQGDLNKIGGDFGNAFPKPDIVISDP 145 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~p 145 (222)
++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.|++++...++ ++++++++|+.+.+.. ..+.||+|+++.
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~~fD~v~~~~ 144 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASH---LETPVDLILFHA 144 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGG---CSSCEEEEEEES
T ss_pred CCCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhh---cCCCceEEEECc
Confidence 467999999999999999998888999999999999999999998888 4699999999887632 125899999975
Q ss_pred CC--CCccHHHHHHHHh-CCCCcEEEEee
Q 043853 146 NR--PGMHMKLIKFLLK-LKAPRIVYVSC 171 (222)
Q Consensus 146 p~--~~~~~~~~~~l~~-l~~~~~v~~~~ 171 (222)
.. ..-...+++.+.+ ++|+|.+++..
T Consensus 145 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (285)
T 4htf_A 145 VLEWVADPRSVLQTLWSVLRPGGVLSLMF 173 (285)
T ss_dssp CGGGCSCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hhhcccCHHHHHHHHHHHcCCCeEEEEEE
Confidence 41 1112455555544 78999988765
No 84
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.53 E-value=5.7e-14 Score=122.65 Aligned_cols=147 Identities=20% Similarity=0.245 Sum_probs=100.9
Q ss_pred CCCeEEEEecccchhHHHHhhcC---CeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEE
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWV---KHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVIS 143 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~---~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~ 143 (222)
++.+|||+|||+|+.+..+++.. .+++|+|+|+.+++.+++|++.+|+++++++++|+.+....+. .+.||+|++
T Consensus 259 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~--~~~fD~Vl~ 336 (450)
T 2yxl_A 259 PGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIG--EEVADKVLL 336 (450)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSC--SSCEEEEEE
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhc--cCCCCEEEE
Confidence 47899999999999999998742 5899999999999999999999999889999999987653221 147999999
Q ss_pred CCCCCCcc------------------------HHHHHHHHh-CCCCcEE-EEeeCc--cchHhhHHHhhccCCCCccCCC
Q 043853 144 DPNRPGMH------------------------MKLIKFLLK-LKAPRIV-YVSCNP--ATCARDLDYLCHGVGDQNIKGC 195 (222)
Q Consensus 144 ~pp~~~~~------------------------~~~~~~l~~-l~~~~~v-~~~~~~--~~~~~~~~~l~~~~~~~~~~~~ 195 (222)
|||+.+.. ..+++.+.. ++|+|.+ |.+|.. ......+..+.+. ..+
T Consensus 337 D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~~v~~~l~~------~~~ 410 (450)
T 2yxl_A 337 DAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKNIRWFLNV------HPE 410 (450)
T ss_dssp ECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHH------CSS
T ss_pred cCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHHHHHHHHHHh------CCC
Confidence 99975542 344554444 6787766 555533 3333344444330 225
Q ss_pred eEEeEeee----------eccCCCCCcee--EEEEEEe
Q 043853 196 YKLKSLQP----------VDMFPHTPHIE--CVCLLEL 221 (222)
Q Consensus 196 ~~~~~~~~----------~~~~p~~~~~~--~v~~~~~ 221 (222)
|++..+.+ +.++|+..+.+ -+++|+|
T Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~P~~~~~dGff~a~l~k 448 (450)
T 2yxl_A 411 FKLVPLKSPYDPGFLEGTMRAWPHRHSTIGFFYALLEK 448 (450)
T ss_dssp CEECCCCSSSEECSSTTCEEECHHHHSSCCEEEEEEEC
T ss_pred CEEeecccccccccCCCeEEECCCCCCCCceEEEEEEE
Confidence 66655432 45667654433 2455554
No 85
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.53 E-value=4.7e-14 Score=120.64 Aligned_cols=124 Identities=15% Similarity=0.134 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcC---------------------------------------
Q 043853 49 QAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWV--------------------------------------- 89 (222)
Q Consensus 49 ~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~--------------------------------------- 89 (222)
+.+.+...+..+.... ++..++|++||+|++++.+|..+
T Consensus 178 l~e~LAaall~l~~~~--~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~ 255 (384)
T 3ldg_A 178 IKENMAAAIILLSNWF--PDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDI 255 (384)
T ss_dssp CCHHHHHHHHHHTTCC--TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTC
T ss_pred CcHHHHHHHHHHhCCC--CCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccC
Confidence 5566666666666544 37899999999999999777532
Q ss_pred -CeEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhhhcCCCCCCCcEEEECCCCC---Cc-------cHHHHHH
Q 043853 90 -KHVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGDFGNAFPKPDIVISDPNRP---GM-------HMKLIKF 157 (222)
Q Consensus 90 -~~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~---~~-------~~~~~~~ 157 (222)
.+++|+|+|+.+++.|++|++.+|+++ +++.++|+.++... ..||+|++|||+. +. ...+.+.
T Consensus 256 ~~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~-----~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~ 330 (384)
T 3ldg_A 256 QLDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTN-----KINGVLISNPPYGERLLDDKAVDILYNEMGET 330 (384)
T ss_dssp CCCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCC-----CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHH
T ss_pred CceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCcc-----CCcCEEEECCchhhccCCHHHHHHHHHHHHHH
Confidence 249999999999999999999999976 99999999987542 3799999999953 21 1222233
Q ss_pred HHhCCCCcEEEEeeCccchHhhH
Q 043853 158 LLKLKAPRIVYVSCNPATCARDL 180 (222)
Q Consensus 158 l~~l~~~~~v~~~~~~~~~~~~~ 180 (222)
++. .+++.+++-+....+.+.+
T Consensus 331 lk~-~~g~~~~iit~~~~l~~~~ 352 (384)
T 3ldg_A 331 FAP-LKTWSQFILTNDTDFEQKF 352 (384)
T ss_dssp HTT-CTTSEEEEEESCTTHHHHH
T ss_pred Hhh-CCCcEEEEEECCHHHHHHh
Confidence 333 3466666555554444444
No 86
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.53 E-value=4.1e-13 Score=108.65 Aligned_cols=144 Identities=17% Similarity=0.152 Sum_probs=98.0
Q ss_pred CCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHH-----------------cCCCcEEEEeCchhchhh
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKL-----------------NNISNATFVQGDLNKIGG 129 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~-----------------~~~~~v~~~~~d~~~~~~ 129 (222)
++.+|||+|||+|..+..+++.+.+|+|+|+|+.|++.|+++... ....+++++++|+.++..
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~ 147 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPR 147 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGG
T ss_pred CCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCCc
Confidence 467999999999999999999888999999999999999876531 012469999999988765
Q ss_pred hcCCCCCCCcEEEECCCCC----CccHHHHHHHHh-CCCCcEEEEee-C--------c--cchHhhHHHhhccCCCCccC
Q 043853 130 DFGNAFPKPDIVISDPNRP----GMHMKLIKFLLK-LKAPRIVYVSC-N--------P--ATCARDLDYLCHGVGDQNIK 193 (222)
Q Consensus 130 ~~~~~~~~fD~ii~~pp~~----~~~~~~~~~l~~-l~~~~~v~~~~-~--------~--~~~~~~~~~l~~~~~~~~~~ 193 (222)
.. .+.||+|++..... .....++..+.+ ++|+|.+++.+ . + .....++..+. .
T Consensus 148 ~~---~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l--------~ 216 (252)
T 2gb4_A 148 AN---IGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLF--------G 216 (252)
T ss_dssp GC---CCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHH--------T
T ss_pred cc---CCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHh--------h
Confidence 31 14799999754211 122345555544 79999886432 1 0 01123444443 3
Q ss_pred CCeEEeEeeeeccCCC-------CCceeEEEEEEe
Q 043853 194 GCYKLKSLQPVDMFPH-------TPHIECVCLLEL 221 (222)
Q Consensus 194 ~~~~~~~~~~~~~~p~-------~~~~~~v~~~~~ 221 (222)
.+|++......+.+.. ....+.+..|.|
T Consensus 217 ~~f~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 251 (252)
T 2gb4_A 217 TKCSMQCLEEVDALEERHKAWGLDYLFEKLYLLTE 251 (252)
T ss_dssp TTEEEEEEEEEECCCGGGTTTTCSCCEEEEEEEEE
T ss_pred CCeEEEEEeccccchhhhhhcCcchhhheeEEEec
Confidence 4698888877665442 334677777765
No 87
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.53 E-value=3.2e-13 Score=108.12 Aligned_cols=111 Identities=21% Similarity=0.124 Sum_probs=86.1
Q ss_pred CCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCC-CcEEEEeCchhchhhhcCCCCCCCcEEEECC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNI-SNATFVQGDLNKIGGDFGNAFPKPDIVISDP 145 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~p 145 (222)
++.+|||+|||+|.++..+++...+++++|+++.+++.|+++...+++ +++++..+|+.+... +...||+|++++
T Consensus 91 ~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~~D~v~~~~ 166 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEV----PEGIFHAAFVDV 166 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCC----CTTCBSEEEECS
T ss_pred CCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhccc----CCCcccEEEECC
Confidence 478999999999999999888777999999999999999999999888 569999999987541 124799999998
Q ss_pred CCCCccHHHHHHHHhCCCCcEEEEeeCccchHhhHHHh
Q 043853 146 NRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYL 183 (222)
Q Consensus 146 p~~~~~~~~~~~l~~l~~~~~v~~~~~~~~~~~~~~~l 183 (222)
|.. ..-+....+.++++|.+++.+.......++...
T Consensus 167 ~~~--~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~ 202 (248)
T 2yvl_A 167 REP--WHYLEKVHKSLMEGAPVGFLLPTANQVIKLLES 202 (248)
T ss_dssp SCG--GGGHHHHHHHBCTTCEEEEEESSHHHHHHHHHH
T ss_pred cCH--HHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHH
Confidence 733 222333344589999998888754444444433
No 88
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.52 E-value=2.8e-13 Score=108.57 Aligned_cols=117 Identities=16% Similarity=0.147 Sum_probs=86.3
Q ss_pred CCCeEEEEecccchhHHHHhhcCC--eEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhhhcCCCCCCCcEEEE
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVK--HVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGDFGNAFPKPDIVIS 143 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~--~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~~~~~~~fD~ii~ 143 (222)
++.+|||+|||+|.+++.+++.++ +|+|+|+|+.+++.|++|++.+++++ +++.++|+.+.... .+.||+|++
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~----~~~~D~Ivi 96 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEK----KDAIDTIVI 96 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG----GGCCCEEEE
T ss_pred CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCc----cccccEEEE
Confidence 478999999999999999998764 89999999999999999999999976 99999999886542 125999876
Q ss_pred CCCCCCccHHHHHHHH-----hCCCCcEEEEeeCccchHhhHHHhhccCCCCccCCCeEEeE
Q 043853 144 DPNRPGMHMKLIKFLL-----KLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKS 200 (222)
Q Consensus 144 ~pp~~~~~~~~~~~l~-----~l~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (222)
.++...++..+. .+++++.++++... -...+...+. +.||.+..
T Consensus 97 ----agmGg~lI~~IL~~~~~~L~~~~~lIlq~~~--~~~~lr~~L~-------~~Gf~i~~ 145 (244)
T 3gnl_A 97 ----AGMGGTLIRTILEEGAAKLAGVTKLILQPNI--AAWQLREWSE-------QNNWLITS 145 (244)
T ss_dssp ----EEECHHHHHHHHHHTGGGGTTCCEEEEEESS--CHHHHHHHHH-------HHTEEEEE
T ss_pred ----eCCchHHHHHHHHHHHHHhCCCCEEEEEcCC--ChHHHHHHHH-------HCCCEEEE
Confidence 244444333322 26677777777643 3344443332 56777644
No 89
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.52 E-value=1.2e-13 Score=120.42 Aligned_cols=114 Identities=19% Similarity=0.203 Sum_probs=86.1
Q ss_pred CCCeEEEEecccchhHHHHhhcC---CeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEE
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWV---KHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVIS 143 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~---~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~ 143 (222)
++.+|||+|||+|+.++.+|+.. ..|+|+|+|+.+++.+++|++.+|++ ++++++|+.++..... +.||+|++
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~~~~~---~~FD~Il~ 176 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALAEAFG---TYFHRVLL 176 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHHHHHC---SCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhhhhcc---ccCCEEEE
Confidence 47899999999999999988642 48999999999999999999999998 9999999988764222 47999999
Q ss_pred CCCCCCcc------------------------HHHHHHHHh-CCCCcEE-EEeeC--ccchHhhHHHhh
Q 043853 144 DPNRPGMH------------------------MKLIKFLLK-LKAPRIV-YVSCN--PATCARDLDYLC 184 (222)
Q Consensus 144 ~pp~~~~~------------------------~~~~~~l~~-l~~~~~v-~~~~~--~~~~~~~~~~l~ 184 (222)
|||+.+.. ..+++.+.. ++|+|.+ |.+|. +..-...+..+.
T Consensus 177 D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~eEne~vv~~~l 245 (464)
T 3m6w_A 177 DAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPEENEGVVAHFL 245 (464)
T ss_dssp ECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHH
T ss_pred CCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCchhcCHHHHHHHH
Confidence 99964321 344444433 6887775 55553 344444455554
No 90
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.52 E-value=1.4e-13 Score=107.71 Aligned_cols=144 Identities=14% Similarity=0.080 Sum_probs=95.6
Q ss_pred CCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHc------------CCCcEEEEeCchhchhhhcCCC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLN------------NISNATFVQGDLNKIGGDFGNA 134 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~------------~~~~v~~~~~d~~~~~~~~~~~ 134 (222)
++.+|||+|||+|..+..+++.+.+|+|+|+|+.|++.|+++.... ...+++++++|+.+++...
T Consensus 22 ~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~--- 98 (203)
T 1pjz_A 22 PGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD--- 98 (203)
T ss_dssp TTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH---
T ss_pred CCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCccc---
Confidence 4789999999999999999988889999999999999999876431 1346899999998876431
Q ss_pred CCCCcEEEECCCCCCc----cHHHHHHHH-hCCCCcEE-EEeeCcc----------chHhhHHHhhccCCCCccCCCeEE
Q 043853 135 FPKPDIVISDPNRPGM----HMKLIKFLL-KLKAPRIV-YVSCNPA----------TCARDLDYLCHGVGDQNIKGCYKL 198 (222)
Q Consensus 135 ~~~fD~ii~~pp~~~~----~~~~~~~l~-~l~~~~~v-~~~~~~~----------~~~~~~~~l~~~~~~~~~~~~~~~ 198 (222)
.+.||+|++......+ ...+++.+. .++|+|.+ ++..... ....++..+. ..||++
T Consensus 99 ~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~--------~~gf~i 170 (203)
T 1pjz_A 99 IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVM--------SGNWEV 170 (203)
T ss_dssp HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTS--------CSSEEE
T ss_pred CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHh--------cCCcEE
Confidence 0379999975421111 123444444 48999973 3332211 0123444443 338999
Q ss_pred eEeeeeccCCCCC---------ceeEEEEEEe
Q 043853 199 KSLQPVDMFPHTP---------HIECVCLLEL 221 (222)
Q Consensus 199 ~~~~~~~~~p~~~---------~~~~v~~~~~ 221 (222)
..+...+.....+ ..+.+..|+|
T Consensus 171 ~~~~~~~~~~~~p~~~~~g~~~~~~~~~~~~~ 202 (203)
T 1pjz_A 171 TKVGGQDTLHSSARGLKAGLERMDEHVYVLER 202 (203)
T ss_dssp EEEEESSCTTTCHHHHHHTCSSCCEEEEEEEE
T ss_pred EEeccccchhcchhhhhcCcchhheeEEEEEe
Confidence 8888776544322 2466665554
No 91
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.52 E-value=1.8e-13 Score=109.41 Aligned_cols=141 Identities=12% Similarity=0.041 Sum_probs=99.8
Q ss_pred CCCeEEEEecccchhHHHHhhc-CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARW-VKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDP 145 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~-~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~p 145 (222)
++.+|||+|||+|.++..+++. ..+++|+|+|+.+++.|++++...+..+++++.+|+.++... .+.||+|+++.
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~----~~~fD~v~~~~ 154 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPE----PDSYDVIWIQW 154 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCC----SSCEEEEEEES
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCC----CCCEEEEEEcc
Confidence 4789999999999999988876 459999999999999999998776544699999998776532 24799999985
Q ss_pred CCCCc----cHHHHHHHH-hCCCCcEEEEeeCcc-----------c---hHhhHHHhhccCCCCccCCCeEEeEeeeecc
Q 043853 146 NRPGM----HMKLIKFLL-KLKAPRIVYVSCNPA-----------T---CARDLDYLCHGVGDQNIKGCYKLKSLQPVDM 206 (222)
Q Consensus 146 p~~~~----~~~~~~~l~-~l~~~~~v~~~~~~~-----------~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 206 (222)
....+ ...+++.+. .++|+|.+++..... . ...++..+.+ +.||++........
T Consensus 155 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-------~aGf~~~~~~~~~~ 227 (241)
T 2ex4_A 155 VIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIIC-------SAGLSLLAEERQEN 227 (241)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHH-------HTTCCEEEEEECCS
T ss_pred hhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHH-------HcCCeEEEeeecCC
Confidence 31111 124445443 378999988754211 0 1233443333 67899999988888
Q ss_pred CCCCCceeEEEE
Q 043853 207 FPHTPHIECVCL 218 (222)
Q Consensus 207 ~p~~~~~~~v~~ 218 (222)
+|.....-.+.+
T Consensus 228 ~~~~~~~v~~~~ 239 (241)
T 2ex4_A 228 LPDEIYHVYSFA 239 (241)
T ss_dssp CCTTSCEEEEEE
T ss_pred Ccchhhhhhhhe
Confidence 887554433433
No 92
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.52 E-value=6.2e-14 Score=120.03 Aligned_cols=94 Identities=22% Similarity=0.364 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcC--------------------------------------
Q 043853 48 HQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWV-------------------------------------- 89 (222)
Q Consensus 48 ~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~-------------------------------------- 89 (222)
++.+.+...+..+.... ++..|||+|||+|++++.++..+
T Consensus 178 pl~e~lAa~ll~~~~~~--~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~ 255 (385)
T 3ldu_A 178 PIRETLAAGLIYLTPWK--AGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNE 255 (385)
T ss_dssp CCCHHHHHHHHHTSCCC--TTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCS
T ss_pred CCcHHHHHHHHHhhCCC--CCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhcc
Confidence 34666666666665443 47899999999999999877542
Q ss_pred --CeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEeCchhchhhhcCCCCCCCcEEEECCCCC
Q 043853 90 --KHVYGYEVVPQAISDACRNAKLNNIS-NATFVQGDLNKIGGDFGNAFPKPDIVISDPNRP 148 (222)
Q Consensus 90 --~~v~gvD~~~~~i~~a~~n~~~~~~~-~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~ 148 (222)
.+|+|+|+|+.+++.|++|+..++++ ++++.++|+.++... ..||+|++|||+.
T Consensus 256 ~~~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~-----~~~D~Iv~NPPyg 312 (385)
T 3ldu_A 256 SKFKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSE-----DEFGFIITNPPYG 312 (385)
T ss_dssp CCCCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCS-----CBSCEEEECCCCC
T ss_pred CCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcC-----CCCcEEEECCCCc
Confidence 36999999999999999999999997 499999999887542 4799999999953
No 93
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.52 E-value=4.8e-13 Score=107.71 Aligned_cols=120 Identities=24% Similarity=0.211 Sum_probs=89.1
Q ss_pred HHHHHHhcCCCCCCCeEEEEecccchhHHHHhhc---CCeEEEEeCCHHHHHHHHHHHHHc-CCCcEEEEeCchhchhhh
Q 043853 55 KLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARW---VKHVYGYEVVPQAISDACRNAKLN-NISNATFVQGDLNKIGGD 130 (222)
Q Consensus 55 ~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~---~~~v~gvD~~~~~i~~a~~n~~~~-~~~~v~~~~~d~~~~~~~ 130 (222)
..+...+... ++.+|||+|||+|.++..+++. ..+++++|+++.+++.|+++++.+ +.+++++.++|+.+...
T Consensus 86 ~~~~~~~~~~--~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~- 162 (258)
T 2pwy_A 86 SAMVTLLDLA--PGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAEL- 162 (258)
T ss_dssp HHHHHHTTCC--TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCC-
T ss_pred HHHHHHcCCC--CCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCC-
Confidence 3445554433 4789999999999999999886 469999999999999999999988 76679999999987622
Q ss_pred cCCCCCCCcEEEECCCCCCccHHHHHH-HHhCCCCcEEEEeeCcc-chHhhHHHh
Q 043853 131 FGNAFPKPDIVISDPNRPGMHMKLIKF-LLKLKAPRIVYVSCNPA-TCARDLDYL 183 (222)
Q Consensus 131 ~~~~~~~fD~ii~~pp~~~~~~~~~~~-l~~l~~~~~v~~~~~~~-~~~~~~~~l 183 (222)
+.+.||+|++++|.. ..+++. .+.++++|.+++.+... ........+
T Consensus 163 ---~~~~~D~v~~~~~~~---~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l 211 (258)
T 2pwy_A 163 ---EEAAYDGVALDLMEP---WKVLEKAALALKPDRFLVAYLPNITQVLELVRAA 211 (258)
T ss_dssp ---CTTCEEEEEEESSCG---GGGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHH
T ss_pred ---CCCCcCEEEECCcCH---HHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHH
Confidence 124799999998743 233443 34478999888777554 333444444
No 94
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.52 E-value=8.9e-14 Score=110.40 Aligned_cols=140 Identities=18% Similarity=0.078 Sum_probs=98.5
Q ss_pred HHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCC
Q 043853 54 YKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGN 133 (222)
Q Consensus 54 ~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~ 133 (222)
.+.+.+.+... ++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.|++++..++ +++++.+|+.+....
T Consensus 59 ~~~~~~~~~~~--~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~v~~~~~d~~~~~~~--- 131 (231)
T 1vbf_A 59 GIFMLDELDLH--KGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLSYYN--NIKLILGDGTLGYEE--- 131 (231)
T ss_dssp HHHHHHHTTCC--TTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHTTCS--SEEEEESCGGGCCGG---
T ss_pred HHHHHHhcCCC--CCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHhhcC--CeEEEECCccccccc---
Confidence 33444544433 47899999999999999999877899999999999999999998766 799999999873221
Q ss_pred CCCCCcEEEECCCCCCccHHHHHHHHhCCCCcEEEEeeCccchHhhHHHhhccCCCCccCCCeEEeEeeeeccCCCCC
Q 043853 134 AFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTP 211 (222)
Q Consensus 134 ~~~~fD~ii~~pp~~~~~~~~~~~l~~l~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 211 (222)
.+.||+|+++.+...+... ....++|+|.+++.+.+...... ..+.. ....|......+..++|...
T Consensus 132 -~~~fD~v~~~~~~~~~~~~---~~~~L~pgG~l~~~~~~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~ 198 (231)
T 1vbf_A 132 -EKPYDRVVVWATAPTLLCK---PYEQLKEGGIMILPIGVGRVQKL-YKVIK------KGNSPSLENLGEVMFGRIGG 198 (231)
T ss_dssp -GCCEEEEEESSBBSSCCHH---HHHTEEEEEEEEEEECSSSSEEE-EEEEC------CTTSCEEEEEEEECCCBCCS
T ss_pred -CCCccEEEECCcHHHHHHH---HHHHcCCCcEEEEEEcCCCccEE-EEEEE------cCCeeEEEEeccEEEEEcCC
Confidence 2479999999865544433 33457899999988865432111 11110 13456666666666666443
No 95
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.52 E-value=4.4e-14 Score=121.22 Aligned_cols=125 Identities=17% Similarity=0.159 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcC--------------------------------------
Q 043853 48 HQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWV-------------------------------------- 89 (222)
Q Consensus 48 ~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~-------------------------------------- 89 (222)
++.+.+...+..++... ++..+||++||+|++++.+|..+
T Consensus 184 pl~e~lAa~ll~l~~~~--~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~ 261 (393)
T 3k0b_A 184 PIKETMAAALVLLTSWH--PDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYD 261 (393)
T ss_dssp SCCHHHHHHHHHHSCCC--TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTT
T ss_pred CCcHHHHHHHHHHhCCC--CCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhccc
Confidence 45666666666666544 37899999999999999777542
Q ss_pred --CeEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhhhcCCCCCCCcEEEECCCCCC----------ccHHHHH
Q 043853 90 --KHVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPG----------MHMKLIK 156 (222)
Q Consensus 90 --~~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~~----------~~~~~~~ 156 (222)
.+++|+|+|+.+++.|++|++.+|+++ +++.++|+.++... ..||+|++|||+.. +...+.+
T Consensus 262 ~~~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~-----~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~ 336 (393)
T 3k0b_A 262 QPLNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTE-----DEYGVVVANPPYGERLEDEEAVRQLYREMGI 336 (393)
T ss_dssp CCCCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCC-----CCSCEEEECCCCCCSHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCC-----CCCCEEEECCCCccccCCchhHHHHHHHHHH
Confidence 249999999999999999999999975 99999999887542 47999999999532 1222333
Q ss_pred HHHhCCCCcEEEEeeCccchHhhH
Q 043853 157 FLLKLKAPRIVYVSCNPATCARDL 180 (222)
Q Consensus 157 ~l~~l~~~~~v~~~~~~~~~~~~~ 180 (222)
.++. .+++.+++-+....+.+.+
T Consensus 337 ~lk~-~~g~~~~iit~~~~l~~~~ 359 (393)
T 3k0b_A 337 VYKR-MPTWSVYVLTSYELFEEVY 359 (393)
T ss_dssp HHHT-CTTCEEEEEECCTTHHHHH
T ss_pred HHhc-CCCCEEEEEECCHHHHHHh
Confidence 4444 3466666555544444433
No 96
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.51 E-value=2.7e-13 Score=109.30 Aligned_cols=103 Identities=11% Similarity=0.067 Sum_probs=82.1
Q ss_pred CCeEEEEecccchhHHHHhhc---CCeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEeCchhchhhhcCCC---CCCCcE
Q 043853 68 SEIVLDLFCGTGTIGLTLARW---VKHVYGYEVVPQAISDACRNAKLNNIS-NATFVQGDLNKIGGDFGNA---FPKPDI 140 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~---~~~v~gvD~~~~~i~~a~~n~~~~~~~-~v~~~~~d~~~~~~~~~~~---~~~fD~ 140 (222)
..+|||+|||+|..++.+++. ..+++++|+|+.+++.|+++++..++. +++++.+|+.+....+... .+.||+
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~ 159 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYDF 159 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBSE
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEEE
Confidence 679999999999999999876 469999999999999999999999885 5999999998765433100 247999
Q ss_pred EEECCCCCCccHHHHHH-HHhCCCCcEEEEee
Q 043853 141 VISDPNRPGMHMKLIKF-LLKLKAPRIVYVSC 171 (222)
Q Consensus 141 ii~~pp~~~~~~~~~~~-l~~l~~~~~v~~~~ 171 (222)
|+++.+.... ..+++. .+.++|+|+++++.
T Consensus 160 V~~d~~~~~~-~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 160 IFVDADKDNY-LNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp EEECSCSTTH-HHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEcCchHHH-HHHHHHHHHhCCCCeEEEEec
Confidence 9999875554 444444 45589999988653
No 97
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.51 E-value=8.1e-14 Score=112.66 Aligned_cols=111 Identities=22% Similarity=0.241 Sum_probs=85.3
Q ss_pred HHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCC
Q 043853 54 YKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGN 133 (222)
Q Consensus 54 ~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~ 133 (222)
.+.+.+.+... ++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.|++++...+.++++++.+|+.+++.
T Consensus 26 ~~~l~~~l~~~--~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~---- 99 (260)
T 1vl5_A 26 LAKLMQIAALK--GNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPF---- 99 (260)
T ss_dssp HHHHHHHHTCC--SCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCS----
T ss_pred HHHHHHHhCCC--CCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCC----
Confidence 34444544433 478999999999999999998888999999999999999999999888889999999988653
Q ss_pred CCCCCcEEEECCC---CCCccHHHHHHH-HhCCCCcEEEEee
Q 043853 134 AFPKPDIVISDPN---RPGMHMKLIKFL-LKLKAPRIVYVSC 171 (222)
Q Consensus 134 ~~~~fD~ii~~pp---~~~~~~~~~~~l-~~l~~~~~v~~~~ 171 (222)
+.+.||+|+++.. ..+. ..++..+ +.++|+|.+++..
T Consensus 100 ~~~~fD~V~~~~~l~~~~d~-~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 100 TDERFHIVTCRIAAHHFPNP-ASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp CTTCEEEEEEESCGGGCSCH-HHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCEEEEEEhhhhHhcCCH-HHHHHHHHHHcCCCCEEEEEE
Confidence 2258999999753 2222 4555554 4489999988753
No 98
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.51 E-value=4e-13 Score=106.94 Aligned_cols=142 Identities=15% Similarity=0.072 Sum_probs=100.4
Q ss_pred CCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCC-CcEEEEeCchhchhhhcCCCCCCCcEEEECCC
Q 043853 68 SEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNI-SNATFVQGDLNKIGGDFGNAFPKPDIVISDPN 146 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp 146 (222)
..+|||+|||+|.++..+++.+.+++|+|+|+.+++.|++++...+. .+++++++|+.++... ..||+|++...
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-----~~fD~v~~~~~ 141 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPT-----ELFDLIFDYVF 141 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCS-----SCEEEEEEESS
T ss_pred CCCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCC-----CCeeEEEEChh
Confidence 45999999999999999988778999999999999999999876543 3599999999886532 47999998654
Q ss_pred CC----CccHHHHHHHHh-CCCCcEEEEeeCcc----------chHhhHHHhhccCCCCccCCCeEEeEeeeecc-CCCC
Q 043853 147 RP----GMHMKLIKFLLK-LKAPRIVYVSCNPA----------TCARDLDYLCHGVGDQNIKGCYKLKSLQPVDM-FPHT 210 (222)
Q Consensus 147 ~~----~~~~~~~~~l~~-l~~~~~v~~~~~~~----------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~p~~ 210 (222)
.. .....+++.+.+ ++|+|.+++...+. ....++..+.+ +.||++..+..... .+..
T Consensus 142 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~-------~~Gf~~~~~~~~~~~~~~~ 214 (235)
T 3lcc_A 142 FCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLV-------PIGFKAVSVEENPHAIPTR 214 (235)
T ss_dssp TTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHG-------GGTEEEEEEEECTTCCTTT
T ss_pred hhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHH-------HcCCeEEEEEecCCccccc
Confidence 21 123455555544 89999988755321 11234444443 67899988776542 3333
Q ss_pred CceeEEEEEEe
Q 043853 211 PHIECVCLLEL 221 (222)
Q Consensus 211 ~~~~~v~~~~~ 221 (222)
...+.+.++++
T Consensus 215 ~g~e~~~~~~~ 225 (235)
T 3lcc_A 215 KGKEKLGRWKK 225 (235)
T ss_dssp TTSCEEEEEEE
T ss_pred cCHHHHhhhhh
Confidence 44566655543
No 99
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.51 E-value=1.1e-13 Score=109.79 Aligned_cols=103 Identities=18% Similarity=0.031 Sum_probs=81.8
Q ss_pred CCeEEEEecccchhHHHHhhc---CCeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEeCchhchhhhcCCCC--CCCcEE
Q 043853 68 SEIVLDLFCGTGTIGLTLARW---VKHVYGYEVVPQAISDACRNAKLNNIS-NATFVQGDLNKIGGDFGNAF--PKPDIV 141 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~---~~~v~gvD~~~~~i~~a~~n~~~~~~~-~v~~~~~d~~~~~~~~~~~~--~~fD~i 141 (222)
+.+|||+|||+|..++.+++. ..+++++|+++.+++.|+++++.+++. +++++++|+.+....+.... +.||+|
T Consensus 70 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~v 149 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVA 149 (229)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccEE
Confidence 679999999999999999875 459999999999999999999999884 59999999987654332111 479999
Q ss_pred EECCCCCCccHHHHHHHHhCCCCcEEEEe
Q 043853 142 ISDPNRPGMHMKLIKFLLKLKAPRIVYVS 170 (222)
Q Consensus 142 i~~pp~~~~~~~~~~~l~~l~~~~~v~~~ 170 (222)
+++++......-+......++++|++++.
T Consensus 150 ~~d~~~~~~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 150 VVDADKENCSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp EECSCSTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 99998655433344444558999988874
No 100
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.51 E-value=3.3e-13 Score=110.34 Aligned_cols=109 Identities=20% Similarity=0.178 Sum_probs=84.3
Q ss_pred CCCeEEEEecccchhHHHHhhc---CCeEEEEeCCHHHHHHHHHHHHHcCC-CcEEEEeCchhchhhhcCCCCCCCcEEE
Q 043853 67 GSEIVLDLFCGTGTIGLTLARW---VKHVYGYEVVPQAISDACRNAKLNNI-SNATFVQGDLNKIGGDFGNAFPKPDIVI 142 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~---~~~v~gvD~~~~~i~~a~~n~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~ii 142 (222)
++.+|||+|||+|.+++.+++. ..+++++|+|+.+++.|++|++.+++ +++++..+|+.+... .+.||+|+
T Consensus 112 ~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-----~~~~D~V~ 186 (277)
T 1o54_A 112 EGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFD-----EKDVDALF 186 (277)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCS-----CCSEEEEE
T ss_pred CCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHccc-----CCccCEEE
Confidence 4789999999999999998876 45999999999999999999999988 469999999987622 24799999
Q ss_pred ECCCCCCccHHHHHH-HHhCCCCcEEEEeeCcc-chHhhHHHh
Q 043853 143 SDPNRPGMHMKLIKF-LLKLKAPRIVYVSCNPA-TCARDLDYL 183 (222)
Q Consensus 143 ~~pp~~~~~~~~~~~-l~~l~~~~~v~~~~~~~-~~~~~~~~l 183 (222)
+++|.. ..+++. .+.++++|.+++.+... ......+.+
T Consensus 187 ~~~~~~---~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l 226 (277)
T 1o54_A 187 LDVPDP---WNYIDKCWEALKGGGRFATVCPTTNQVQETLKKL 226 (277)
T ss_dssp ECCSCG---GGTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHH
T ss_pred ECCcCH---HHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHH
Confidence 999844 233333 34478999988777643 333334444
No 101
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.51 E-value=6.9e-14 Score=111.02 Aligned_cols=131 Identities=15% Similarity=0.186 Sum_probs=97.1
Q ss_pred CCCeEEEEecccchhHHHHhhc-C-------CeEEEEeCCHHHHHHHHHHHHHcC-----CCcEEEEeCchhchhhhcCC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARW-V-------KHVYGYEVVPQAISDACRNAKLNN-----ISNATFVQGDLNKIGGDFGN 133 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~-~-------~~v~gvD~~~~~i~~a~~n~~~~~-----~~~v~~~~~d~~~~~~~~~~ 133 (222)
++.+|||+|||+|.++..+++. . .+++++|+++.+++.|++++...+ .++++++.+|+.+....
T Consensus 84 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~--- 160 (227)
T 1r18_A 84 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPP--- 160 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGG---
T ss_pred CCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCc---
Confidence 4789999999999999988874 2 499999999999999999998776 56799999999873221
Q ss_pred CCCCCcEEEECCCCCCccHHHHHHHHhCCCCcEEEEeeCccchHhhHHHhhccCCCCccCCCeEEeEeeeeccCCC
Q 043853 134 AFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPH 209 (222)
Q Consensus 134 ~~~~fD~ii~~pp~~~~~~~~~~~l~~l~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~ 209 (222)
...||+|+++.+...+... ....++++|.+++.+.+......+..+.+ ..+++|+...+.++.++|.
T Consensus 161 -~~~fD~I~~~~~~~~~~~~---~~~~LkpgG~lvi~~~~~~~~~~l~~~~~-----~~~~~~~~~~l~~~~~~p~ 227 (227)
T 1r18_A 161 -NAPYNAIHVGAAAPDTPTE---LINQLASGGRLIVPVGPDGGSQYMQQYDK-----DANGKVEMTRLMGVMYVPL 227 (227)
T ss_dssp -GCSEEEEEECSCBSSCCHH---HHHTEEEEEEEEEEESCSSSCEEEEEEEE-----CTTSCEEEEEEEEECCCCC
T ss_pred -CCCccEEEECCchHHHHHH---HHHHhcCCCEEEEEEecCCCceEEEEEEE-----cCCCcEEEEEeccEEEeeC
Confidence 1479999999875554433 33446899999988875333333322221 1145788888888888874
No 102
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.50 E-value=1.9e-13 Score=108.20 Aligned_cols=135 Identities=21% Similarity=0.243 Sum_probs=98.1
Q ss_pred CCCCeEEEEecccchhHHHHhhcC---CeEEEEeCCHHHHHHHHHHHHHcCC-----CcEEEEeCchhchhhhcCCCCCC
Q 043853 66 DGSEIVLDLFCGTGTIGLTLARWV---KHVYGYEVVPQAISDACRNAKLNNI-----SNATFVQGDLNKIGGDFGNAFPK 137 (222)
Q Consensus 66 ~~~~~vlDlg~G~G~~~~~la~~~---~~v~gvD~~~~~i~~a~~n~~~~~~-----~~v~~~~~d~~~~~~~~~~~~~~ 137 (222)
.++.+|||+|||+|.++..+++.. .+++++|+++.+++.+++++..++. ++++++.+|+.+.... ...
T Consensus 76 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~----~~~ 151 (226)
T 1i1n_A 76 HEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAE----EAP 151 (226)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGG----GCC
T ss_pred CCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCccc----CCC
Confidence 357899999999999999988753 4999999999999999999988663 5699999999764322 247
Q ss_pred CcEEEECCCCCCccHHHHHHHHhCCCCcEEEEeeCccchHhhHHHhhccCCCCccCCCeEEeEeeeeccCCCCCc
Q 043853 138 PDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPH 212 (222)
Q Consensus 138 fD~ii~~pp~~~~~~~~~~~l~~l~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 212 (222)
||+|+++.+...+... ....++|+|.++++..+......+..+.+ ..++.|+...+..+.+.|....
T Consensus 152 fD~i~~~~~~~~~~~~---~~~~LkpgG~lv~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~f~p~~~~ 218 (226)
T 1i1n_A 152 YDAIHVGAAAPVVPQA---LIDQLKPGGRLILPVGPAGGNQMLEQYDK-----LQDGSIKMKPLMGVIYVPLTDK 218 (226)
T ss_dssp EEEEEECSBBSSCCHH---HHHTEEEEEEEEEEESCTTSCEEEEEEEE-----CTTSCEEEEEEEEECCCBCCCH
T ss_pred cCEEEECCchHHHHHH---HHHhcCCCcEEEEEEecCCCceEEEEEEE-----cCCCcEEEEEcCceEEEeccCC
Confidence 9999999876555433 33446899999888765332222222211 1145788888888888887653
No 103
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.49 E-value=3.9e-13 Score=105.65 Aligned_cols=101 Identities=19% Similarity=0.144 Sum_probs=80.5
Q ss_pred CCCeEEEEecccchhHHHHhhcC---CeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEE
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWV---KHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVIS 143 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~---~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~ 143 (222)
++.+|||+|||+|.++..+++.. .+++|+|+|+.+++.|++++...++++++++.+|+.+... ..+.||+|++
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~----~~~~fD~v~~ 112 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPL----PDNTVDFIFM 112 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSS----CSSCEEEEEE
T ss_pred CCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCC----CCCCeeEEEe
Confidence 47899999999999999998765 5999999999999999999999998889999999987653 2257999999
Q ss_pred CCCCC--CccHHHHHHHH-hCCCCcEEEEee
Q 043853 144 DPNRP--GMHMKLIKFLL-KLKAPRIVYVSC 171 (222)
Q Consensus 144 ~pp~~--~~~~~~~~~l~-~l~~~~~v~~~~ 171 (222)
+.... .-...+++.+. .++|+|.+++..
T Consensus 113 ~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~ 143 (219)
T 3dh0_A 113 AFTFHELSEPLKFLEELKRVAKPFAYLAIID 143 (219)
T ss_dssp ESCGGGCSSHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ehhhhhcCCHHHHHHHHHHHhCCCeEEEEEE
Confidence 76411 11245555554 478999888764
No 104
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.49 E-value=3.6e-13 Score=110.84 Aligned_cols=96 Identities=23% Similarity=0.272 Sum_probs=75.7
Q ss_pred HHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCC-CcEEEEeCchhchhhhcC
Q 043853 54 YKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNI-SNATFVQGDLNKIGGDFG 132 (222)
Q Consensus 54 ~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~-~~v~~~~~d~~~~~~~~~ 132 (222)
.+.+.+.+... ++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.+++++..++. ++++++++|+.+...
T Consensus 17 ~~~i~~~~~~~--~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~--- 91 (285)
T 1zq9_A 17 INSIIDKAALR--PTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDL--- 91 (285)
T ss_dssp HHHHHHHTCCC--TTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCC---
T ss_pred HHHHHHhcCCC--CCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccc---
Confidence 34455554433 478999999999999999998888999999999999999999987766 469999999987643
Q ss_pred CCCCCCcEEEECCCCCCccHHHHHH
Q 043853 133 NAFPKPDIVISDPNRPGMHMKLIKF 157 (222)
Q Consensus 133 ~~~~~fD~ii~~pp~~~~~~~~~~~ 157 (222)
..||+|++|+|+....+.+...
T Consensus 92 ---~~fD~vv~nlpy~~~~~~~~~~ 113 (285)
T 1zq9_A 92 ---PFFDTCVANLPYQISSPFVFKL 113 (285)
T ss_dssp ---CCCSEEEEECCGGGHHHHHHHH
T ss_pred ---hhhcEEEEecCcccchHHHHHH
Confidence 2699999999965443333333
No 105
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.49 E-value=1e-12 Score=105.73 Aligned_cols=101 Identities=24% Similarity=0.260 Sum_probs=81.7
Q ss_pred CCCeEEEEecccchhHHHHhhcCC-eEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhhhcCCCCCCCcEEEEC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVK-HVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGDFGNAFPKPDIVISD 144 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~-~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~~~~~~~fD~ii~~ 144 (222)
++.+|||+|||+|.++..+++..+ +++|+|+|+.+++.|++++..+++++ ++++++|+.+++. +.+.||+|+++
T Consensus 46 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~fD~v~~~ 121 (257)
T 3f4k_A 46 DDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPF----QNEELDLIWSE 121 (257)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSS----CTTCEEEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCC----CCCCEEEEEec
Confidence 467999999999999999998765 99999999999999999999999876 9999999977653 23589999987
Q ss_pred CCCCC-ccHHHHHHHHh-CCCCcEEEEee
Q 043853 145 PNRPG-MHMKLIKFLLK-LKAPRIVYVSC 171 (222)
Q Consensus 145 pp~~~-~~~~~~~~l~~-l~~~~~v~~~~ 171 (222)
..... -...+++.+.+ ++|+|.+++++
T Consensus 122 ~~l~~~~~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 122 GAIYNIGFERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp SCSCCCCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred ChHhhcCHHHHHHHHHHHcCCCcEEEEEE
Confidence 64221 13455555544 78999988775
No 106
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.49 E-value=7.9e-13 Score=105.34 Aligned_cols=113 Identities=17% Similarity=0.187 Sum_probs=85.1
Q ss_pred HHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcC
Q 043853 53 LYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFG 132 (222)
Q Consensus 53 ~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~ 132 (222)
..+++.+.+.....++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.|++++...+. +++++++|+.+.+..
T Consensus 23 ~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~-- 99 (246)
T 1y8c_A 23 WSDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGL-KPRLACQDISNLNIN-- 99 (246)
T ss_dssp HHHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTC-CCEEECCCGGGCCCS--
T ss_pred HHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHhhcCC-CeEEEecccccCCcc--
Confidence 34445555433323578999999999999999998888999999999999999999988776 699999999886532
Q ss_pred CCCCCCcEEEECC-CC--C---CccHHHHHHHHh-CCCCcEEEEee
Q 043853 133 NAFPKPDIVISDP-NR--P---GMHMKLIKFLLK-LKAPRIVYVSC 171 (222)
Q Consensus 133 ~~~~~fD~ii~~p-p~--~---~~~~~~~~~l~~-l~~~~~v~~~~ 171 (222)
+.||+|+++. .. - .....+++.+.+ ++|+|.+++++
T Consensus 100 ---~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 142 (246)
T 1y8c_A 100 ---RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDI 142 (246)
T ss_dssp ---CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred ---CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 4799999976 31 1 122344454444 78999888754
No 107
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.49 E-value=3.2e-13 Score=105.88 Aligned_cols=98 Identities=16% Similarity=0.079 Sum_probs=80.2
Q ss_pred CCeEEEEecccchhHHHHhhc---CCeEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhhhcCCCCCCCcEEEE
Q 043853 68 SEIVLDLFCGTGTIGLTLARW---VKHVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGDFGNAFPKPDIVIS 143 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~---~~~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~~~~~~~fD~ii~ 143 (222)
+.+|||+|||+|..++.+++. ..+++++|+|+.+++.|+++++..++++ ++++++|+.+..... .+ ||+|++
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~---~~-fD~v~~ 132 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQ---RD-IDILFM 132 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTC---CS-EEEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccC---CC-CCEEEE
Confidence 679999999999999999876 4599999999999999999999888864 999999998764432 24 999999
Q ss_pred CCCCCCccHHHHHHHH-hCCCCcEEEEe
Q 043853 144 DPNRPGMHMKLIKFLL-KLKAPRIVYVS 170 (222)
Q Consensus 144 ~pp~~~~~~~~~~~l~-~l~~~~~v~~~ 170 (222)
+.+.... ..+++.+. .++|+|+++++
T Consensus 133 ~~~~~~~-~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 133 DCDVFNG-ADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp ETTTSCH-HHHHHHHGGGEEEEEEEEEE
T ss_pred cCChhhh-HHHHHHHHHhcCCCeEEEEE
Confidence 9775544 45555554 47899988874
No 108
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.49 E-value=9.3e-13 Score=106.86 Aligned_cols=101 Identities=25% Similarity=0.285 Sum_probs=81.4
Q ss_pred CCCCeEEEEecccchhHHHHhhcCC-eEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhhhcCCCCCCCcEEEE
Q 043853 66 DGSEIVLDLFCGTGTIGLTLARWVK-HVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGDFGNAFPKPDIVIS 143 (222)
Q Consensus 66 ~~~~~vlDlg~G~G~~~~~la~~~~-~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~~~~~~~fD~ii~ 143 (222)
.++.+|||+|||+|.++..+++... +++|+|+|+.+++.|+++++..++++ ++++++|+.+++. +.+.||+|++
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~fD~i~~ 120 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPF----RNEELDLIWS 120 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCC----CTTCEEEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCC----CCCCEEEEEE
Confidence 3578999999999999999988754 99999999999999999999999865 9999999987653 2258999999
Q ss_pred CCCC--CCccHHHHHHHHh-CCCCcEEEEee
Q 043853 144 DPNR--PGMHMKLIKFLLK-LKAPRIVYVSC 171 (222)
Q Consensus 144 ~pp~--~~~~~~~~~~l~~-l~~~~~v~~~~ 171 (222)
.... .+ ...+++.+.+ ++|+|.+++.+
T Consensus 121 ~~~~~~~~-~~~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 121 EGAIYNIG-FERGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp SSCGGGTC-HHHHHHHHGGGEEEEEEEEEEE
T ss_pred cCCceecC-HHHHHHHHHHHcCCCCEEEEEE
Confidence 8752 22 2455555544 78999988765
No 109
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.48 E-value=9.1e-13 Score=108.90 Aligned_cols=108 Identities=13% Similarity=0.021 Sum_probs=83.6
Q ss_pred HHHHHHhcCCCCCCCeEEEEecccchhHHHHhhc-CCeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEeCchhchhhhcC
Q 043853 55 KLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARW-VKHVYGYEVVPQAISDACRNAKLNNIS-NATFVQGDLNKIGGDFG 132 (222)
Q Consensus 55 ~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~-~~~v~gvD~~~~~i~~a~~n~~~~~~~-~v~~~~~d~~~~~~~~~ 132 (222)
+.+.+.+.. .++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.|++++...+++ +++++.+|+.++
T Consensus 62 ~~~~~~~~~--~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----- 134 (302)
T 3hem_A 62 KLALDKLNL--EPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF----- 134 (302)
T ss_dssp HHHHHTTCC--CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC-----
T ss_pred HHHHHHcCC--CCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc-----
Confidence 334444433 34789999999999999999886 679999999999999999999999987 599999999876
Q ss_pred CCCCCCcEEEECCC-----CC------CccHHHHHHHH-hCCCCcEEEEee
Q 043853 133 NAFPKPDIVISDPN-----RP------GMHMKLIKFLL-KLKAPRIVYVSC 171 (222)
Q Consensus 133 ~~~~~fD~ii~~pp-----~~------~~~~~~~~~l~-~l~~~~~v~~~~ 171 (222)
.+.||+|++... .. .....+++.+. .++|+|.+++..
T Consensus 135 --~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 183 (302)
T 3hem_A 135 --DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT 183 (302)
T ss_dssp --CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEE
T ss_pred --CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEE
Confidence 148999998643 11 11245555554 489999988766
No 110
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.48 E-value=3.7e-13 Score=107.80 Aligned_cols=111 Identities=14% Similarity=0.100 Sum_probs=83.2
Q ss_pred CCCeEEEEecccchhHHHHhhcC--CeEEEEeCCHHHHHHHHHHHHH------cCCCcEEEEeCchhc-hhhhcCCCCCC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWV--KHVYGYEVVPQAISDACRNAKL------NNISNATFVQGDLNK-IGGDFGNAFPK 137 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~--~~v~gvD~~~~~i~~a~~n~~~------~~~~~v~~~~~d~~~-~~~~~~~~~~~ 137 (222)
++.+|||+|||+|.+++.+|+.. ..++|+|+|+.+++.|+++++. .+.+|++++++|+.+ +...+. .+.
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~--~~~ 123 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFY--KGQ 123 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCC--TTC
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCC--CcC
Confidence 46789999999999999999864 4899999999999999998865 456789999999987 332121 247
Q ss_pred CcEEEECCCCC----------CccHHHHHHHHh-CCCCcEEEEeeCccchHhh
Q 043853 138 PDIVISDPNRP----------GMHMKLIKFLLK-LKAPRIVYVSCNPATCARD 179 (222)
Q Consensus 138 fD~ii~~pp~~----------~~~~~~~~~l~~-l~~~~~v~~~~~~~~~~~~ 179 (222)
||.|+++.|.. .....+++.+.+ |+++|.+++.++.......
T Consensus 124 ~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~~ 176 (235)
T 3ckk_A 124 LTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVLELHDW 176 (235)
T ss_dssp EEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHHH
T ss_pred eeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCHHHHHH
Confidence 99998865421 122456666544 8999999988766544443
No 111
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.48 E-value=3.5e-13 Score=108.41 Aligned_cols=113 Identities=20% Similarity=0.168 Sum_probs=86.3
Q ss_pred HHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhc-CCeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEeCchhchhh
Q 043853 52 VLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARW-VKHVYGYEVVPQAISDACRNAKLNNIS-NATFVQGDLNKIGG 129 (222)
Q Consensus 52 ~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~-~~~v~gvD~~~~~i~~a~~n~~~~~~~-~v~~~~~d~~~~~~ 129 (222)
...+.+...+... ++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.|+++++..+++ +++++++|+.+.+.
T Consensus 23 ~~~~~l~~~~~~~--~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 100 (256)
T 1nkv_A 23 EKYATLGRVLRMK--PGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA 100 (256)
T ss_dssp HHHHHHHHHTCCC--TTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC
T ss_pred HHHHHHHHhcCCC--CCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc
Confidence 3345555555433 4789999999999999998875 569999999999999999999998885 69999999988653
Q ss_pred hcCCCCCCCcEEEECCC--CCCccHHHHHHHHh-CCCCcEEEEee
Q 043853 130 DFGNAFPKPDIVISDPN--RPGMHMKLIKFLLK-LKAPRIVYVSC 171 (222)
Q Consensus 130 ~~~~~~~~fD~ii~~pp--~~~~~~~~~~~l~~-l~~~~~v~~~~ 171 (222)
.+.||+|++... ...-...+++.+.+ ++|+|.+++..
T Consensus 101 -----~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 101 -----NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp -----SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred -----CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence 247999998543 11123556666654 78999888754
No 112
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.48 E-value=2.4e-12 Score=101.97 Aligned_cols=103 Identities=20% Similarity=0.226 Sum_probs=78.6
Q ss_pred CCCCeEEEEecccchhHHHHhhc---CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEE
Q 043853 66 DGSEIVLDLFCGTGTIGLTLARW---VKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVI 142 (222)
Q Consensus 66 ~~~~~vlDlg~G~G~~~~~la~~---~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii 142 (222)
.++.+|||+|||+|.++..+++. ..+++|+|+|+.+++.++++++.+ ++++++++|+.+...... ..+.||+|+
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~--~~v~~~~~d~~~~~~~~~-~~~~~D~v~ 148 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER--RNIVPILGDATKPEEYRA-LVPKVDVIF 148 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC--TTEEEEECCTTCGGGGTT-TCCCEEEEE
T ss_pred CCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc--CCCEEEEccCCCcchhhc-ccCCceEEE
Confidence 35789999999999999999875 259999999999999999998765 579999999987431111 114799999
Q ss_pred ECCCCCCccHHHHHH-HHhCCCCcEEEEee
Q 043853 143 SDPNRPGMHMKLIKF-LLKLKAPRIVYVSC 171 (222)
Q Consensus 143 ~~pp~~~~~~~~~~~-l~~l~~~~~v~~~~ 171 (222)
+++|.......++.. .+.++|+|.+++..
T Consensus 149 ~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 149 EDVAQPTQAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp ECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCCCHhHHHHHHHHHHHhcCCCCEEEEEE
Confidence 999854433342444 45589999988764
No 113
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.48 E-value=4.2e-13 Score=107.89 Aligned_cols=114 Identities=16% Similarity=0.114 Sum_probs=85.6
Q ss_pred CCCeEEEEecccchhHHHHhhcCC--eEEEEeCCHHHHHHHHHHHHHc--------CCCcEEEEeCchhchhhhcCCCCC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVK--HVYGYEVVPQAISDACRNAKLN--------NISNATFVQGDLNKIGGDFGNAFP 136 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~--~v~gvD~~~~~i~~a~~n~~~~--------~~~~v~~~~~d~~~~~~~~~~~~~ 136 (222)
++.+|||+|||+|.+++.+++.++ +++|+|+|+.+++.|+++++.+ ++++++++++|+.+...... +..
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~-~~~ 127 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFF-EKG 127 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTS-CTT
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhc-ccc
Confidence 467999999999999999998753 8999999999999999999887 77789999999987433221 224
Q ss_pred CCcEEEECCCCC----------CccHHHHHHHH-hCCCCcEEEEeeCccchHhhHH
Q 043853 137 KPDIVISDPNRP----------GMHMKLIKFLL-KLKAPRIVYVSCNPATCARDLD 181 (222)
Q Consensus 137 ~fD~ii~~pp~~----------~~~~~~~~~l~-~l~~~~~v~~~~~~~~~~~~~~ 181 (222)
.+|.|+++.|.. .....++..+. .++++|.+++.++...+...+.
T Consensus 128 ~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~ 183 (246)
T 2vdv_E 128 QLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDVKDLHEWMV 183 (246)
T ss_dssp CEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHH
T ss_pred ccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEeccHHHHHHHH
Confidence 788887654321 12245666554 4899999998877655544443
No 114
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.48 E-value=3.1e-13 Score=108.28 Aligned_cols=103 Identities=15% Similarity=0.059 Sum_probs=82.1
Q ss_pred CCeEEEEecccchhHHHHhhc---CCeEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhhhcCCC---CCCCcE
Q 043853 68 SEIVLDLFCGTGTIGLTLARW---VKHVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGDFGNA---FPKPDI 140 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~---~~~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~~~~---~~~fD~ 140 (222)
..+|||+|||+|..++.+++. ..+++++|+|+.+++.|+++++..++++ ++++.+|+.+....+... .+.||+
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~ 150 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYDF 150 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEEE
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcCE
Confidence 679999999999999999875 4699999999999999999999999864 999999998875433100 247999
Q ss_pred EEECCCCCCccHHHHHHH-HhCCCCcEEEEee
Q 043853 141 VISDPNRPGMHMKLIKFL-LKLKAPRIVYVSC 171 (222)
Q Consensus 141 ii~~pp~~~~~~~~~~~l-~~l~~~~~v~~~~ 171 (222)
|+++.+.... ..+++.+ ..++|+|+++++.
T Consensus 151 I~~d~~~~~~-~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 151 GFVDADKPNY-IKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEECSCGGGH-HHHHHHHHHHEEEEEEEEEEC
T ss_pred EEECCchHHH-HHHHHHHHHhcCCCeEEEEec
Confidence 9999875443 4444544 4589999888753
No 115
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.47 E-value=3.6e-14 Score=114.11 Aligned_cols=103 Identities=13% Similarity=0.017 Sum_probs=81.9
Q ss_pred CCeEEEEecccchhHHHHhhc---CCeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEeCchhchhhhcCC--CCCCCcEE
Q 043853 68 SEIVLDLFCGTGTIGLTLARW---VKHVYGYEVVPQAISDACRNAKLNNIS-NATFVQGDLNKIGGDFGN--AFPKPDIV 141 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~---~~~v~gvD~~~~~i~~a~~n~~~~~~~-~v~~~~~d~~~~~~~~~~--~~~~fD~i 141 (222)
+.+|||+|||+|..++.+++. ..+|+++|+++.+++.|+++++..+++ +++++.+|+.+....+.. ..+.||+|
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V 140 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFI 140 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEE
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEE
Confidence 679999999999999999874 459999999999999999999999986 599999999887654310 02479999
Q ss_pred EECCCCCCccHHHHHHHHhCCCCcEEEEe
Q 043853 142 ISDPNRPGMHMKLIKFLLKLKAPRIVYVS 170 (222)
Q Consensus 142 i~~pp~~~~~~~~~~~l~~l~~~~~v~~~ 170 (222)
+++.+.......+....+.++|+|++++.
T Consensus 141 ~~d~~~~~~~~~l~~~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 141 FIDADKTNYLNYYELALKLVTPKGLIAID 169 (242)
T ss_dssp EEESCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEcCChHHhHHHHHHHHHhcCCCeEEEEE
Confidence 99987544433333344558999998874
No 116
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.47 E-value=2.5e-13 Score=108.36 Aligned_cols=103 Identities=13% Similarity=0.123 Sum_probs=81.3
Q ss_pred CCeEEEEecccchhHHHHhhc---CCeEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhhhcCCCC--CCCcEE
Q 043853 68 SEIVLDLFCGTGTIGLTLARW---VKHVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGDFGNAF--PKPDIV 141 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~---~~~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~~~~~--~~fD~i 141 (222)
+.+|||+|||+|..++.+++. ..+++++|+++.+++.|+++++..++++ ++++.+|+.+....+.... +.||+|
T Consensus 73 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V 152 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDLI 152 (232)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEE
Confidence 679999999999999999875 3499999999999999999999988864 9999999977654432222 479999
Q ss_pred EECCCCCCccHHHHHHH-HhCCCCcEEEEee
Q 043853 142 ISDPNRPGMHMKLIKFL-LKLKAPRIVYVSC 171 (222)
Q Consensus 142 i~~pp~~~~~~~~~~~l-~~l~~~~~v~~~~ 171 (222)
+++.+.... ..+++.+ ..++|+|++++..
T Consensus 153 ~~d~~~~~~-~~~l~~~~~~LkpgG~lv~~~ 182 (232)
T 3cbg_A 153 FIDADKRNY-PRYYEIGLNLLRRGGLMVIDN 182 (232)
T ss_dssp EECSCGGGH-HHHHHHHHHTEEEEEEEEEEC
T ss_pred EECCCHHHH-HHHHHHHHHHcCCCeEEEEeC
Confidence 999874433 3444444 5578999988753
No 117
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.47 E-value=1.9e-12 Score=118.35 Aligned_cols=160 Identities=13% Similarity=0.151 Sum_probs=111.2
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcC---CeEEEEeCCHHHHHHHHHHHHHc------CCCcEE
Q 043853 48 HQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWV---KHVYGYEVVPQAISDACRNAKLN------NISNAT 118 (222)
Q Consensus 48 ~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~---~~v~gvD~~~~~i~~a~~n~~~~------~~~~v~ 118 (222)
+......+++.+.+... ++.+|||+|||+|.++..+++.+ .+|+|+|+|+.|++.|++++... +.++++
T Consensus 704 PL~eqRle~LLelL~~~--~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVe 781 (950)
T 3htx_A 704 PLSKQRVEYALKHIRES--SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSAT 781 (950)
T ss_dssp CHHHHHHHHHHHHHHHS--CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEE
T ss_pred hHHHHHHHHHHHHhccc--CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceE
Confidence 34444556666655433 37899999999999999999876 59999999999999999977642 566799
Q ss_pred EEeCchhchhhhcCCCCCCCcEEEECCCCCCcc----HHHHHHH-HhCCCCcEEEEeeCccchHhhHH------------
Q 043853 119 FVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMH----MKLIKFL-LKLKAPRIVYVSCNPATCARDLD------------ 181 (222)
Q Consensus 119 ~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~~~~----~~~~~~l-~~l~~~~~v~~~~~~~~~~~~~~------------ 181 (222)
++++|+.+++.. .+.||+|++.....-+. ..+++.+ +.++|+ .+++++........+.
T Consensus 782 fiqGDa~dLp~~----d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~eyN~lF~~Lnp~tr~~dPd 856 (950)
T 3htx_A 782 LYDGSILEFDSR----LHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNYEFNTILQRSTPETQEENNS 856 (950)
T ss_dssp EEESCTTSCCTT----SCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBGGGHHHHTCC----------
T ss_pred EEECchHhCCcc----cCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCchhhhhhhhccccccccccc
Confidence 999999887542 35799999975422222 1244443 447888 7776663322211111
Q ss_pred --------------------------HhhccCCCCccCCCeEEeEeeeecc-CCCCCceeEEEEEEe
Q 043853 182 --------------------------YLCHGVGDQNIKGCYKLKSLQPVDM-FPHTPHIECVCLLEL 221 (222)
Q Consensus 182 --------------------------~l~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~v~~~~~ 221 (222)
.++. ..+|.+.....-+. +|...+.+.+.+|.|
T Consensus 857 ~~~~~~fRh~DHrFEWTReEFr~Wae~LAe-------r~GYsVefvGVGDg~ep~vG~~TQiAVFtR 916 (950)
T 3htx_A 857 EPQLPKFRNHDHKFEWTREQFNQWASKLGK-------RHNYSVEFSGVGGSGEVEPGFASQIAIFRR 916 (950)
T ss_dssp --CCSSCSCSSCSCCBCHHHHHHHHHHHHH-------HTTEEEEEEEESSCSSSTTCCSEEEEEEEE
T ss_pred ccccccccccCcceeecHHHHHHHHHHHHH-------hcCcEEEEEccCCCCCCCCCCccEEEEEEE
Confidence 1221 44788877776666 678889999999987
No 118
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.47 E-value=5.3e-13 Score=103.10 Aligned_cols=99 Identities=22% Similarity=0.169 Sum_probs=79.8
Q ss_pred CCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCCC
Q 043853 68 SEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNR 147 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~ 147 (222)
+.+|||+|||+|.++..+++.+.+++|+|+|+.+++.|++++...+.+++++..+|+.+.+. .+.||+|+++...
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-----~~~~D~v~~~~~l 107 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-----DRQYDFILSTVVL 107 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-----CCCEEEEEEESCG
T ss_pred CCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-----CCCceEEEEcchh
Confidence 67999999999999999998878999999999999999999998888789999999988643 2579999998642
Q ss_pred C----CccHHHHHHHHh-CCCCcEEEEee
Q 043853 148 P----GMHMKLIKFLLK-LKAPRIVYVSC 171 (222)
Q Consensus 148 ~----~~~~~~~~~l~~-l~~~~~v~~~~ 171 (222)
. .....+++.+.+ ++|+|.+++.+
T Consensus 108 ~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 108 MFLEAKTIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp GGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hhCCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 1 123455555544 78999866543
No 119
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.47 E-value=2.4e-13 Score=108.25 Aligned_cols=101 Identities=12% Similarity=0.234 Sum_probs=81.7
Q ss_pred CCeEEEEecccchhHHHHhhc--CCeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEeCchhchhhhcCCCCCCCcEEEEC
Q 043853 68 SEIVLDLFCGTGTIGLTLARW--VKHVYGYEVVPQAISDACRNAKLNNIS-NATFVQGDLNKIGGDFGNAFPKPDIVISD 144 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~--~~~v~gvD~~~~~i~~a~~n~~~~~~~-~v~~~~~d~~~~~~~~~~~~~~fD~ii~~ 144 (222)
+.+|||+|||+|..+..+++. ..+++++|+++.+++.|+++++..+++ +++++.+|+.+...... ..+.||+|+++
T Consensus 55 ~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~~~~fD~I~~~ 133 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLE-LYPLFDVLFID 133 (233)
T ss_dssp CSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHT-TSCCEEEEEEE
T ss_pred CCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcc-cCCCccEEEEC
Confidence 679999999999999999886 469999999999999999999999886 49999999988644321 12479999999
Q ss_pred CCCCCccHHHHHHH-HhCCCCcEEEEe
Q 043853 145 PNRPGMHMKLIKFL-LKLKAPRIVYVS 170 (222)
Q Consensus 145 pp~~~~~~~~~~~l-~~l~~~~~v~~~ 170 (222)
++.... ..+++.+ ..++++|.++++
T Consensus 134 ~~~~~~-~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 134 AAKGQY-RRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp GGGSCH-HHHHHHHGGGEEEEEEEEEE
T ss_pred CCHHHH-HHHHHHHHHHcCCCeEEEEE
Confidence 875543 4555554 447899998876
No 120
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.47 E-value=1.4e-12 Score=108.40 Aligned_cols=100 Identities=13% Similarity=-0.009 Sum_probs=81.2
Q ss_pred CCCeEEEEecccchhHHHHhhc-CCeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEeCchhchhhhcCCCCCCCcEEEEC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARW-VKHVYGYEVVPQAISDACRNAKLNNIS-NATFVQGDLNKIGGDFGNAFPKPDIVISD 144 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~-~~~v~gvD~~~~~i~~a~~n~~~~~~~-~v~~~~~d~~~~~~~~~~~~~~fD~ii~~ 144 (222)
++.+|||+|||+|.++..+++. +.+++|+|+++.+++.|+++++.++++ +++++.+|+.+.+. +.+.||+|++.
T Consensus 117 ~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~fD~V~~~ 192 (312)
T 3vc1_A 117 PDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPF----DKGAVTASWNN 192 (312)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCC----CTTCEEEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCC----CCCCEeEEEEC
Confidence 4789999999999999999886 789999999999999999999999986 59999999987642 22589999986
Q ss_pred CC--CCCccHHHHHHHH-hCCCCcEEEEee
Q 043853 145 PN--RPGMHMKLIKFLL-KLKAPRIVYVSC 171 (222)
Q Consensus 145 pp--~~~~~~~~~~~l~-~l~~~~~v~~~~ 171 (222)
.. ..+ ...+++.+. .++|+|.+++.+
T Consensus 193 ~~l~~~~-~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 193 ESTMYVD-LHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp SCGGGSC-HHHHHHHHHHHEEEEEEEEEEE
T ss_pred CchhhCC-HHHHHHHHHHHcCCCcEEEEEE
Confidence 53 223 355555554 489999887665
No 121
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.47 E-value=2.3e-13 Score=110.48 Aligned_cols=123 Identities=10% Similarity=-0.061 Sum_probs=82.3
Q ss_pred HHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCC
Q 043853 54 YKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGN 133 (222)
Q Consensus 54 ~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~ 133 (222)
.+.+.+.+... ++.+|||+|||+|.+++.+++.+.+|+|+|+|+.|++.|++++..+.+ ...+...+.. .....
T Consensus 34 ~~~il~~l~l~--~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~~~~v-~~~~~~~~~~-~~~~~-- 107 (261)
T 3iv6_A 34 RENDIFLENIV--PGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALADRCV-TIDLLDITAE-IPKEL-- 107 (261)
T ss_dssp HHHHHHTTTCC--TTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTSSSCC-EEEECCTTSC-CCGGG--
T ss_pred HHHHHHhcCCC--CcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhccc-eeeeeecccc-ccccc--
Confidence 34444544433 478999999999999999999888999999999999999999865411 1333222220 01111
Q ss_pred CCCCCcEEEECCCCCC----ccHHHHHHH-HhCCCCcEEEEeeCccchHhhHHHhh
Q 043853 134 AFPKPDIVISDPNRPG----MHMKLIKFL-LKLKAPRIVYVSCNPATCARDLDYLC 184 (222)
Q Consensus 134 ~~~~fD~ii~~pp~~~----~~~~~~~~l-~~l~~~~~v~~~~~~~~~~~~~~~l~ 184 (222)
.+.||+|+++..-.. -...++..+ +.+ |+|.+++++......++...+.
T Consensus 108 -~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~g~~~~d~~~l~ 161 (261)
T 3iv6_A 108 -AGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKLGFYDIDLKLIE 161 (261)
T ss_dssp -TTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEBSCCHHHHHHHH
T ss_pred -CCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEeccCcccccHHHHH
Confidence 147999999864211 112334433 347 9999999998877777765443
No 122
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.47 E-value=7e-13 Score=104.57 Aligned_cols=99 Identities=26% Similarity=0.254 Sum_probs=78.4
Q ss_pred CCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCC-
Q 043853 68 SEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPN- 146 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp- 146 (222)
+.+|||+|||+|.++..+++.+.+++|+|+|+.+++.|+++.+.++ .+++++++|+.+... +.+.||+|+++++
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~~----~~~~~D~v~~~~~~ 113 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAKSRE-SNVEFIVGDARKLSF----EDKTFDYVIFIDSI 113 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCTTSCCS----CTTCEEEEEEESCG
T ss_pred CCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC-CCceEEECchhcCCC----CCCcEEEEEEcCch
Confidence 6799999999999999999888899999999999999999998877 579999999987542 1247999999877
Q ss_pred -CCCc--cHHHHHHHH-hCCCCcEEEEee
Q 043853 147 -RPGM--HMKLIKFLL-KLKAPRIVYVSC 171 (222)
Q Consensus 147 -~~~~--~~~~~~~l~-~l~~~~~v~~~~ 171 (222)
.... ...+++.+. .++|+|.+++..
T Consensus 114 ~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 142 (227)
T 1ve3_A 114 VHFEPLELNQVFKEVRRVLKPSGKFIMYF 142 (227)
T ss_dssp GGCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HhCCHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 3321 133444443 378988887654
No 123
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.46 E-value=2.1e-13 Score=107.02 Aligned_cols=114 Identities=17% Similarity=0.175 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchh
Q 043853 49 QAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIG 128 (222)
Q Consensus 49 ~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~ 128 (222)
..+.+.+.+...+... ++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.|++++...+ +++++++|+.+..
T Consensus 35 ~~~~~~~~l~~~~~~~--~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~~~~ 110 (216)
T 3ofk_A 35 ERERHTQLLRLSLSSG--AVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKRWS--HISWAATDILQFS 110 (216)
T ss_dssp HHHHHHHHHHHHTTTS--SEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTTTCS--SEEEEECCTTTCC
T ss_pred HHHHHHHHHHHHcccC--CCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhcccCC--CeEEEEcchhhCC
Confidence 3345455555554333 36799999999999999999888899999999999999999987543 6999999998876
Q ss_pred hhcCCCCCCCcEEEECCCCCCc-----cHHHHHHH-HhCCCCcEEEEee
Q 043853 129 GDFGNAFPKPDIVISDPNRPGM-----HMKLIKFL-LKLKAPRIVYVSC 171 (222)
Q Consensus 129 ~~~~~~~~~fD~ii~~pp~~~~-----~~~~~~~l-~~l~~~~~v~~~~ 171 (222)
. .+.||+|+++.....+ ...+++.+ +.++|+|.+++++
T Consensus 111 ~-----~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 111 T-----AELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp C-----SCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred C-----CCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 2 2589999997541111 12334444 3478999998865
No 124
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.46 E-value=7e-13 Score=105.98 Aligned_cols=100 Identities=19% Similarity=0.205 Sum_probs=81.4
Q ss_pred CCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPN 146 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp 146 (222)
++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.+++++...+++++++.++|+.+++. +.+.||+|++...
T Consensus 21 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~----~~~~fD~v~~~~~ 96 (239)
T 1xxl_A 21 AEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPF----PDDSFDIITCRYA 96 (239)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCS----CTTCEEEEEEESC
T ss_pred CCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCC----CCCcEEEEEECCc
Confidence 478999999999999999998888999999999999999999999888889999999987643 2257999998753
Q ss_pred ---CCCccHHHHHHH-HhCCCCcEEEEee
Q 043853 147 ---RPGMHMKLIKFL-LKLKAPRIVYVSC 171 (222)
Q Consensus 147 ---~~~~~~~~~~~l-~~l~~~~~v~~~~ 171 (222)
... ...++..+ +.++|+|.+++..
T Consensus 97 l~~~~~-~~~~l~~~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 97 AHHFSD-VRKAVREVARVLKQDGRFLLVD 124 (239)
T ss_dssp GGGCSC-HHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhccC-HHHHHHHHHHHcCCCcEEEEEE
Confidence 222 24555554 4479999888754
No 125
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.46 E-value=2.9e-12 Score=102.23 Aligned_cols=142 Identities=15% Similarity=0.096 Sum_probs=94.0
Q ss_pred CCCCCCeEEEEecccchhHHHHhhc---CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcE
Q 043853 64 RDDGSEIVLDLFCGTGTIGLTLARW---VKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDI 140 (222)
Q Consensus 64 ~~~~~~~vlDlg~G~G~~~~~la~~---~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ 140 (222)
...++.+|||+|||+|+++..+++. ..+|+|+|+++.+++.+.+.++.. +|+.++++|+....... ...+.||+
T Consensus 73 ~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r--~nv~~i~~Da~~~~~~~-~~~~~~D~ 149 (232)
T 3id6_C 73 PIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR--PNIFPLLADARFPQSYK-SVVENVDV 149 (232)
T ss_dssp SCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC--TTEEEEECCTTCGGGTT-TTCCCEEE
T ss_pred CCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc--CCeEEEEcccccchhhh-ccccceEE
Confidence 3446899999999999999998875 349999999999986665555443 47999999997643211 11247999
Q ss_pred EEECCCCCCccHHHHHHHH-hCCCCcEEEEeeCc---------cch-HhhHHHhhccCCCCccCCCeEEeEeeeeccCCC
Q 043853 141 VISDPNRPGMHMKLIKFLL-KLKAPRIVYVSCNP---------ATC-ARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPH 209 (222)
Q Consensus 141 ii~~pp~~~~~~~~~~~l~-~l~~~~~v~~~~~~---------~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~ 209 (222)
|++|.+.......+...+. .|+|+|.+++++.+ ... ......+. +.+|++... .++.|.
T Consensus 150 I~~d~a~~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~--------~~gf~~~~~--~~l~p~ 219 (232)
T 3id6_C 150 LYVDIAQPDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLE--------NSNFETIQI--INLDPY 219 (232)
T ss_dssp EEECCCCTTHHHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHH--------HTTEEEEEE--EECTTT
T ss_pred EEecCCChhHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHH--------HCCCEEEEE--eccCCC
Confidence 9999875433233344444 58999998876422 122 22334443 567887774 456675
Q ss_pred CC-ceeEEEE
Q 043853 210 TP-HIECVCL 218 (222)
Q Consensus 210 ~~-~~~~v~~ 218 (222)
.. |.-.+..
T Consensus 220 ~~~h~~v~~~ 229 (232)
T 3id6_C 220 DKDHAIVLSK 229 (232)
T ss_dssp CSSCEEEEEE
T ss_pred cCceEEEEEE
Confidence 44 5555543
No 126
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.46 E-value=5.7e-13 Score=113.82 Aligned_cols=114 Identities=18% Similarity=0.139 Sum_probs=81.9
Q ss_pred HHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhc-C-CeEEEEeCCHHHHHHHHHHH-------HHcCC--CcEEEEeC
Q 043853 54 YKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARW-V-KHVYGYEVVPQAISDACRNA-------KLNNI--SNATFVQG 122 (222)
Q Consensus 54 ~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~-~-~~v~gvD~~~~~i~~a~~n~-------~~~~~--~~v~~~~~ 122 (222)
+..+.+.+... ++.+|||+|||+|.+++.+|.. + .+++|||+++.+++.|++++ +.+|+ .+++++++
T Consensus 162 i~~il~~l~l~--~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~G 239 (438)
T 3uwp_A 162 VAQMIDEIKMT--DDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERG 239 (438)
T ss_dssp HHHHHHHHCCC--TTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEEC
T ss_pred HHHHHHhcCCC--CCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEEC
Confidence 34444555444 4889999999999999988864 3 36999999999999999875 34565 46999999
Q ss_pred chhchhhhcCCCCCCCcEEEECCCCC--CccHHHHHHHHhCCCCcEEEEee
Q 043853 123 DLNKIGGDFGNAFPKPDIVISDPNRP--GMHMKLIKFLLKLKAPRIVYVSC 171 (222)
Q Consensus 123 d~~~~~~~~~~~~~~fD~ii~~pp~~--~~~~~~~~~l~~l~~~~~v~~~~ 171 (222)
|+.+.+.... ...||+|+++++.- .....+.+.++.|+|||.++++.
T Consensus 240 D~~~lp~~d~--~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE 288 (438)
T 3uwp_A 240 DFLSEEWRER--IANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK 288 (438)
T ss_dssp CTTSHHHHHH--HHTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEESS
T ss_pred cccCCccccc--cCCccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEee
Confidence 9988764210 12699999998732 23333444445589999888553
No 127
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.46 E-value=6.3e-13 Score=115.88 Aligned_cols=144 Identities=19% Similarity=0.186 Sum_probs=99.7
Q ss_pred CCCeEEEEecccchhHHHHhhc---------------CCeEEEEeCCHHHHHHHHHHHHHcCCC--cEEEEeCchhchhh
Q 043853 67 GSEIVLDLFCGTGTIGLTLARW---------------VKHVYGYEVVPQAISDACRNAKLNNIS--NATFVQGDLNKIGG 129 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~---------------~~~v~gvD~~~~~i~~a~~n~~~~~~~--~v~~~~~d~~~~~~ 129 (222)
++.+|+|+|||+|++++.+++. ..+++|+|+++.+++.|+.|+..+++. ++++.++|......
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~~ 250 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKEP 250 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSCC
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCcc
Confidence 4679999999999999987753 258999999999999999999999885 68899999876543
Q ss_pred hcCCCCCCCcEEEECCCCCCcc-------------------HHHHHH-HHhCCCCcEEEEeeCcc-----chHhhHHH-h
Q 043853 130 DFGNAFPKPDIVISDPNRPGMH-------------------MKLIKF-LLKLKAPRIVYVSCNPA-----TCARDLDY-L 183 (222)
Q Consensus 130 ~~~~~~~~fD~ii~~pp~~~~~-------------------~~~~~~-l~~l~~~~~v~~~~~~~-----~~~~~~~~-l 183 (222)
. ..||+|++|||..... ..++.. +..++++|.+.+..... .....++. +
T Consensus 251 ~-----~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~~~L~~~~~~~~iR~~L 325 (445)
T 2okc_A 251 S-----TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPDNVLFEAGAGETIRKRL 325 (445)
T ss_dssp S-----SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHHHHHCSTHHHHHHHHH
T ss_pred c-----CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECCcccccCcHHHHHHHHH
Confidence 2 3799999999943211 134443 44578887764443211 12233432 3
Q ss_pred hccCCCCccCCCeEEeEeeeeccCCCCCceeEEEEEEeC
Q 043853 184 CHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLLELS 222 (222)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~~~~~~ 222 (222)
.+ ...+.....-|-.+|+.+..-.+|.+|.+.
T Consensus 326 ~~-------~~~l~~ii~lp~~~F~~t~v~t~Il~~~k~ 357 (445)
T 2okc_A 326 LQ-------DFNLHTILRLPTGIFYAQGVKANVLFFSKG 357 (445)
T ss_dssp HH-------HEEEEEEEECCSSSSSSTTCCEEEEEEEES
T ss_pred Hh-------cCcEEEEEeCCCCCccCCCCCEEEEEEECC
Confidence 22 223444444466788887888888888763
No 128
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.46 E-value=6.1e-13 Score=103.40 Aligned_cols=123 Identities=15% Similarity=0.103 Sum_probs=90.7
Q ss_pred CCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCCC
Q 043853 68 SEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNR 147 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~ 147 (222)
+.+|||+|||+|.++..+++.+.+++|+|+|+.+++.|+++ .++++++++|+.+++.. .+.||+|++....
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~~----~~~fD~v~~~~~l 112 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQT-----HPSVTFHHGTITDLSDS----PKRWAGLLAWYSL 112 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHHHH-----CTTSEEECCCGGGGGGS----CCCEEEEEEESSS
T ss_pred CCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHh-----CCCCeEEeCcccccccC----CCCeEEEEehhhH
Confidence 67999999999999999998888999999999999999987 34689999999886532 2589999996531
Q ss_pred ----CCccHHHHHHHHh-CCCCcEEEEeeCcc---------------chHhhHHHhhccCCCCccCCCeEEeEeeeecc
Q 043853 148 ----PGMHMKLIKFLLK-LKAPRIVYVSCNPA---------------TCARDLDYLCHGVGDQNIKGCYKLKSLQPVDM 206 (222)
Q Consensus 148 ----~~~~~~~~~~l~~-l~~~~~v~~~~~~~---------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 206 (222)
......+++.+.+ ++|+|.++++.... ....++..+++ +.||++........
T Consensus 113 ~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-------~~Gf~~~~~~~~~~ 184 (203)
T 3h2b_A 113 IHMGPGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALE-------TAGFQVTSSHWDPR 184 (203)
T ss_dssp TTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHH-------HTTEEEEEEEECTT
T ss_pred hcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHH-------HCCCcEEEEEecCC
Confidence 1123455555544 78999988776221 11334444433 67999998876554
No 129
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.46 E-value=3.2e-13 Score=108.01 Aligned_cols=103 Identities=15% Similarity=0.080 Sum_probs=80.8
Q ss_pred CCeEEEEecccchhHHHHhhc---CCeEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhhhcCCC---------
Q 043853 68 SEIVLDLFCGTGTIGLTLARW---VKHVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGDFGNA--------- 134 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~---~~~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~~~~--------- 134 (222)
+.+|||+|||+|..+..+++. ..+++++|+++.+++.|+++++..+.++ ++++.+|+.+....+...
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~ 140 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASD 140 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTT
T ss_pred cCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccccc
Confidence 679999999999999999876 4699999999999999999999998876 999999997754322100
Q ss_pred ---C-CCCcEEEECCCCCCccHHHHHH-HHhCCCCcEEEEee
Q 043853 135 ---F-PKPDIVISDPNRPGMHMKLIKF-LLKLKAPRIVYVSC 171 (222)
Q Consensus 135 ---~-~~fD~ii~~pp~~~~~~~~~~~-l~~l~~~~~v~~~~ 171 (222)
. +.||+|+++...... ..+++. ...++++|++++..
T Consensus 141 f~~~~~~fD~I~~~~~~~~~-~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 141 FAFGPSSIDLFFLDADKENY-PNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp TCCSTTCEEEEEECSCGGGH-HHHHHHHHHHEEEEEEEEEEC
T ss_pred ccCCCCCcCEEEEeCCHHHH-HHHHHHHHHHcCCCeEEEEEc
Confidence 1 479999999764433 344444 45589999988764
No 130
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.46 E-value=2.7e-13 Score=115.38 Aligned_cols=95 Identities=20% Similarity=0.284 Sum_probs=77.4
Q ss_pred CCeEEEEecccchhHHHHhhcC-CeEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhhhcCCCCCCCcEEEECC
Q 043853 68 SEIVLDLFCGTGTIGLTLARWV-KHVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGDFGNAFPKPDIVISDP 145 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~~-~~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~~~~~~~fD~ii~~p 145 (222)
+++|||+|||+|.+++.+|+.+ .+|+|+|.|+ +++.|+++++.|++++ ++++++|+.++... ++||+|++.+
T Consensus 84 ~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-----e~~DvivsE~ 157 (376)
T 4hc4_A 84 GKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELP-----EQVDAIVSEW 157 (376)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCS-----SCEEEEECCC
T ss_pred CCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCC-----ccccEEEeec
Confidence 7899999999999999888865 5899999996 8899999999999976 99999999887432 4899999976
Q ss_pred C-----CCCccHHHHHHHHh-CCCCcEEE
Q 043853 146 N-----RPGMHMKLIKFLLK-LKAPRIVY 168 (222)
Q Consensus 146 p-----~~~~~~~~~~~l~~-l~~~~~v~ 168 (222)
- ..++...++....+ |+|+|+++
T Consensus 158 ~~~~l~~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 158 MGYGLLHESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp CBTTBTTTCSHHHHHHHHHHHEEEEEEEE
T ss_pred ccccccccchhhhHHHHHHhhCCCCceEC
Confidence 3 34455666665543 78887765
No 131
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.46 E-value=5.3e-13 Score=109.35 Aligned_cols=99 Identities=19% Similarity=0.134 Sum_probs=80.9
Q ss_pred CCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPN 146 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp 146 (222)
++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.|++++..+++ +++++++|+.+... .+.||+|+++.+
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~-----~~~fD~i~~~~~ 193 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKENL-NISTALYDINAANI-----QENYDFIVSTVV 193 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCGGGCCC-----CSCEEEEEECSS
T ss_pred CCCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHcCC-ceEEEEeccccccc-----cCCccEEEEccc
Confidence 378999999999999999998888999999999999999999999988 79999999988654 258999999875
Q ss_pred CC----CccHHHHHHHHh-CCCCcEEEEee
Q 043853 147 RP----GMHMKLIKFLLK-LKAPRIVYVSC 171 (222)
Q Consensus 147 ~~----~~~~~~~~~l~~-l~~~~~v~~~~ 171 (222)
.. .....+++.+.+ ++++|.+++.+
T Consensus 194 ~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 194 FMFLNRERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp GGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 21 222355555544 78999876654
No 132
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.45 E-value=1.3e-12 Score=106.35 Aligned_cols=100 Identities=22% Similarity=0.237 Sum_probs=81.0
Q ss_pred CCCeEEEEecccchhHHHHhhc--CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEEC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARW--VKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISD 144 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~--~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~ 144 (222)
++.+|||+|||+|.++..+++. ..+++|+|+|+.+++.|++++...++++++++.+|+.+.+.. .+.||+|+++
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~----~~~fD~v~~~ 112 (276)
T 3mgg_A 37 PGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFE----DSSFDHIFVC 112 (276)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSC----TTCEEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCC----CCCeeEEEEe
Confidence 4789999999999999999887 459999999999999999999999988899999999876532 2589999987
Q ss_pred CC---CCCccHHHHHHHHh-CCCCcEEEEee
Q 043853 145 PN---RPGMHMKLIKFLLK-LKAPRIVYVSC 171 (222)
Q Consensus 145 pp---~~~~~~~~~~~l~~-l~~~~~v~~~~ 171 (222)
.. ... ...+++.+.+ ++|+|.+++..
T Consensus 113 ~~l~~~~~-~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 113 FVLEHLQS-PEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp SCGGGCSC-HHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhhcCC-HHHHHHHHHHHcCCCcEEEEEE
Confidence 54 122 2455555544 79999887653
No 133
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.45 E-value=5.9e-13 Score=113.66 Aligned_cols=113 Identities=23% Similarity=0.272 Sum_probs=86.3
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCC-eEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchh
Q 043853 51 EVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVK-HVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIG 128 (222)
Q Consensus 51 ~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~-~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~ 128 (222)
..+.+.+...... .++.+|||+|||+|.+++.+++.+. +|+|+|+| .+++.|+++++.+++++ ++++++|+.++.
T Consensus 49 ~~~~~~i~~~~~~--~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 125 (376)
T 3r0q_C 49 DAYFNAVFQNKHH--FEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDIS 125 (376)
T ss_dssp HHHHHHHHTTTTT--TTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCC
T ss_pred HHHHHHHHhcccc--CCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcC
Confidence 3334444443322 3478999999999999999988765 99999999 99999999999999876 999999998875
Q ss_pred hhcCCCCCCCcEEEECCC-----CCCccHHHHHHH-HhCCCCcEEEEee
Q 043853 129 GDFGNAFPKPDIVISDPN-----RPGMHMKLIKFL-LKLKAPRIVYVSC 171 (222)
Q Consensus 129 ~~~~~~~~~fD~ii~~pp-----~~~~~~~~~~~l-~~l~~~~~v~~~~ 171 (222)
.. ++||+|++++. .......++..+ +.|+|+|+++++.
T Consensus 126 ~~-----~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 126 LP-----EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp CS-----SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred cC-----CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 42 47999999873 223345566666 5589999887543
No 134
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.45 E-value=3.3e-12 Score=108.92 Aligned_cols=103 Identities=17% Similarity=0.083 Sum_probs=80.0
Q ss_pred CCCeEEEEecccchhHHHHhhcC--CeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhc-hhhhcCCCCCCCcEEEE
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWV--KHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNK-IGGDFGNAFPKPDIVIS 143 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~--~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~-~~~~~~~~~~~fD~ii~ 143 (222)
++.+|||+| |+|.+++.+++.+ .+++|+|+|+.+++.|++|++.+|+++++++++|+.+ ++... .+.||+|++
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~---~~~fD~Vi~ 247 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYA---LHKFDTFIT 247 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTT---SSCBSEEEE
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhc---cCCccEEEE
Confidence 468999999 9999999998765 4999999999999999999999998789999999988 33211 247999999
Q ss_pred CCCCCCc-cHHHHHHH-HhCCCCc-EEEEeeCc
Q 043853 144 DPNRPGM-HMKLIKFL-LKLKAPR-IVYVSCNP 173 (222)
Q Consensus 144 ~pp~~~~-~~~~~~~l-~~l~~~~-~v~~~~~~ 173 (222)
|||.... ...+++.+ +.++|+| ++++++..
T Consensus 248 ~~p~~~~~~~~~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 248 DPPETLEAIRAFVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp CCCSSHHHHHHHHHHHHHTBCSTTCEEEEEECT
T ss_pred CCCCchHHHHHHHHHHHHHcccCCeEEEEEEec
Confidence 9995311 13334433 4478988 55666655
No 135
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.45 E-value=1.6e-12 Score=104.27 Aligned_cols=133 Identities=14% Similarity=0.107 Sum_probs=94.7
Q ss_pred CCCeEEEEecccchhHHHHhhc-CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARW-VKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDP 145 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~-~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~p 145 (222)
++.+|||+|||+|.++..+++. ..+++|+|+|+.+++.|++++... .+++++++|+.+++. +.+.||+|++..
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~~----~~~~fD~v~~~~ 166 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM--PVGKFILASMETATL----PPNTYDLIVIQW 166 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS--SEEEEEESCGGGCCC----CSSCEEEEEEES
T ss_pred CCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC--CceEEEEccHHHCCC----CCCCeEEEEEcc
Confidence 4789999999999999988865 558999999999999999987654 469999999987643 224799999976
Q ss_pred CCCCc----cHHHHHHHH-hCCCCcEEEEeeCcc---------------chHhhHHHhhccCCCCccCCCeEEeEeeeec
Q 043853 146 NRPGM----HMKLIKFLL-KLKAPRIVYVSCNPA---------------TCARDLDYLCHGVGDQNIKGCYKLKSLQPVD 205 (222)
Q Consensus 146 p~~~~----~~~~~~~l~-~l~~~~~v~~~~~~~---------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 205 (222)
....+ ...+++.+. .++|+|.+++..... .....+..+++ +.||++.......
T Consensus 167 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-------~aGf~~~~~~~~~ 239 (254)
T 1xtp_A 167 TAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFN-------ESGVRVVKEAFQE 239 (254)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHH-------HHTCCEEEEEECT
T ss_pred hhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHH-------HCCCEEEEeeecC
Confidence 42211 234444443 478999988776310 01123343332 5689999888777
Q ss_pred cCCCCCc
Q 043853 206 MFPHTPH 212 (222)
Q Consensus 206 ~~p~~~~ 212 (222)
.+|....
T Consensus 240 ~~~~~~~ 246 (254)
T 1xtp_A 240 EWPTDLF 246 (254)
T ss_dssp TCCTTSC
T ss_pred CCCchhh
Confidence 7776543
No 136
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.44 E-value=2.5e-13 Score=116.56 Aligned_cols=80 Identities=21% Similarity=0.166 Sum_probs=69.5
Q ss_pred CCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHc--CCCcEEEEeCchhchhhhcCCCCCCCcEEEECC
Q 043853 68 SEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLN--NISNATFVQGDLNKIGGDFGNAFPKPDIVISDP 145 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~--~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~p 145 (222)
+.+|||+|||+|..++.+++.+.+|+|+|+|+.+++.|++|++.+ |+++++++++|+.++..... ...||+|++||
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~--~~~fDvV~lDP 171 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIK--TFHPDYIYVDP 171 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHH--HHCCSEEEECC
T ss_pred CCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhcc--CCCceEEEECC
Confidence 689999999999999999998889999999999999999999998 88779999999988643221 13799999999
Q ss_pred CCCC
Q 043853 146 NRPG 149 (222)
Q Consensus 146 p~~~ 149 (222)
|+.+
T Consensus 172 Prr~ 175 (410)
T 3ll7_A 172 ARRS 175 (410)
T ss_dssp EEC-
T ss_pred CCcC
Confidence 9543
No 137
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.44 E-value=9.5e-13 Score=107.44 Aligned_cols=111 Identities=22% Similarity=0.158 Sum_probs=85.0
Q ss_pred HHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhc---CCeEEEEeCCHHHHHHHHHHHHHc-C--CCcEEEEeCchhch
Q 043853 54 YKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARW---VKHVYGYEVVPQAISDACRNAKLN-N--ISNATFVQGDLNKI 127 (222)
Q Consensus 54 ~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~---~~~v~gvD~~~~~i~~a~~n~~~~-~--~~~v~~~~~d~~~~ 127 (222)
...+...+... ++.+|||+|||+|.++..+++. ..+++++|+++.+++.|++|++.+ + .++++++++|+.+.
T Consensus 88 ~~~i~~~~~~~--~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~ 165 (280)
T 1i9g_A 88 AAQIVHEGDIF--PGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADS 165 (280)
T ss_dssp HHHHHHHTTCC--TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGC
T ss_pred HHHHHHHcCCC--CCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhc
Confidence 34455554433 4789999999999999999875 469999999999999999999887 6 56799999999876
Q ss_pred hhhcCCCCCCCcEEEECCCCCCccHHHHHHH-HhCCCCcEEEEeeCc
Q 043853 128 GGDFGNAFPKPDIVISDPNRPGMHMKLIKFL-LKLKAPRIVYVSCNP 173 (222)
Q Consensus 128 ~~~~~~~~~~fD~ii~~pp~~~~~~~~~~~l-~~l~~~~~v~~~~~~ 173 (222)
.. +.+.||+|++++|.. ..+++.+ +.++++|.+++.+..
T Consensus 166 ~~----~~~~~D~v~~~~~~~---~~~l~~~~~~L~pgG~l~~~~~~ 205 (280)
T 1i9g_A 166 EL----PDGSVDRAVLDMLAP---WEVLDAVSRLLVAGGVLMVYVAT 205 (280)
T ss_dssp CC----CTTCEEEEEEESSCG---GGGHHHHHHHEEEEEEEEEEESS
T ss_pred CC----CCCceeEEEECCcCH---HHHHHHHHHhCCCCCEEEEEeCC
Confidence 32 124799999998733 2344444 447899998877754
No 138
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.44 E-value=9.5e-14 Score=112.73 Aligned_cols=82 Identities=26% Similarity=0.284 Sum_probs=68.5
Q ss_pred CCCeEEEEecccchhHHHHhhcCCeEEEEeCCH-------HHHHHHHHHHHHcCCCc-EEEEeCchhchhhhcCCCCCCC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVP-------QAISDACRNAKLNNISN-ATFVQGDLNKIGGDFGNAFPKP 138 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~-------~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~~~~~~~f 138 (222)
++.+|||+|||+|.+++.+|..+.+|+|+|+|+ .+++.|++|++.+++.+ ++++++|+.++...+....+.|
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~~f 162 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQGKP 162 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHCCC
T ss_pred CcCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCCCc
Confidence 367999999999999999998888999999999 99999999999888866 9999999988754322100379
Q ss_pred cEEEECCCCC
Q 043853 139 DIVISDPNRP 148 (222)
Q Consensus 139 D~ii~~pp~~ 148 (222)
|+|++||++.
T Consensus 163 D~V~~dP~~~ 172 (258)
T 2r6z_A 163 DIVYLDPMYP 172 (258)
T ss_dssp SEEEECCCC-
T ss_pred cEEEECCCCC
Confidence 9999999743
No 139
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.44 E-value=1.5e-12 Score=103.68 Aligned_cols=96 Identities=17% Similarity=0.147 Sum_probs=76.3
Q ss_pred CCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPN 146 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp 146 (222)
++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.|+++... +++++++|+.+... .+.||+|++.-.
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~----~v~~~~~d~~~~~~-----~~~fD~v~~~~~ 112 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRLKD----GITYIHSRFEDAQL-----PRRYDNIVLTHV 112 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHSCS----CEEEEESCGGGCCC-----SSCEEEEEEESC
T ss_pred CCCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhhhC----CeEEEEccHHHcCc-----CCcccEEEEhhH
Confidence 367899999999999999998888999999999999999988642 69999999988632 257999998653
Q ss_pred --CCCccHHHHHHHH-h-CCCCcEEEEee
Q 043853 147 --RPGMHMKLIKFLL-K-LKAPRIVYVSC 171 (222)
Q Consensus 147 --~~~~~~~~~~~l~-~-l~~~~~v~~~~ 171 (222)
.-.-...+++.+. + ++|+|.+++++
T Consensus 113 l~~~~~~~~~l~~~~~~~LkpgG~l~i~~ 141 (250)
T 2p7i_A 113 LEHIDDPVALLKRINDDWLAEGGRLFLVC 141 (250)
T ss_dssp GGGCSSHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred HHhhcCHHHHHHHHHHHhcCCCCEEEEEc
Confidence 1111256666666 4 78999988776
No 140
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.44 E-value=1.8e-12 Score=106.93 Aligned_cols=99 Identities=17% Similarity=0.146 Sum_probs=77.8
Q ss_pred CCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCC---CcEEEEeCchhchhhhcCCCCCCCcEEEEC
Q 043853 68 SEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNI---SNATFVQGDLNKIGGDFGNAFPKPDIVISD 144 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~---~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~ 144 (222)
+.+|||+|||+|.++..+++.+.+++|+|+|+.+++.|++++...+. .+++++++|+.+++. .+.||+|++.
T Consensus 83 ~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-----~~~fD~v~~~ 157 (299)
T 3g2m_A 83 SGPVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-----DKRFGTVVIS 157 (299)
T ss_dssp CSCEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-----SCCEEEEEEC
T ss_pred CCcEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-----CCCcCEEEEC
Confidence 45999999999999999998888999999999999999999988764 469999999988654 2589998865
Q ss_pred CC---CCC--ccHHHHHHHH-hCCCCcEEEEee
Q 043853 145 PN---RPG--MHMKLIKFLL-KLKAPRIVYVSC 171 (222)
Q Consensus 145 pp---~~~--~~~~~~~~l~-~l~~~~~v~~~~ 171 (222)
.. ... ....+++.+. .++|+|.+++++
T Consensus 158 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 190 (299)
T 3g2m_A 158 SGSINELDEADRRGLYASVREHLEPGGKFLLSL 190 (299)
T ss_dssp HHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcccccCCHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 21 111 1244455444 478999988766
No 141
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.44 E-value=2.2e-12 Score=104.75 Aligned_cols=117 Identities=18% Similarity=0.169 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhc-CCeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEeCchhc
Q 043853 49 QAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARW-VKHVYGYEVVPQAISDACRNAKLNNIS-NATFVQGDLNK 126 (222)
Q Consensus 49 ~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~-~~~v~gvD~~~~~i~~a~~n~~~~~~~-~v~~~~~d~~~ 126 (222)
....+.+.+.+.+... ++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.|++++...+++ +++++.+|+.+
T Consensus 45 ~~~~~~~~l~~~~~~~--~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 122 (273)
T 3bus_A 45 ATDRLTDEMIALLDVR--SGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMD 122 (273)
T ss_dssp HHHHHHHHHHHHSCCC--TTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS
T ss_pred HHHHHHHHHHHhcCCC--CCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECcccc
Confidence 3444455555555433 4789999999999999988874 669999999999999999999998876 49999999987
Q ss_pred hhhhcCCCCCCCcEEEECCCCC--CccHHHHHHHHh-CCCCcEEEEee
Q 043853 127 IGGDFGNAFPKPDIVISDPNRP--GMHMKLIKFLLK-LKAPRIVYVSC 171 (222)
Q Consensus 127 ~~~~~~~~~~~fD~ii~~pp~~--~~~~~~~~~l~~-l~~~~~v~~~~ 171 (222)
.+. +.+.||+|++..... .-...+++.+.+ ++|+|.+++..
T Consensus 123 ~~~----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 123 LPF----EDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp CCS----CTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCC----CCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 643 225799999875421 123555666554 78999887665
No 142
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.44 E-value=2.8e-12 Score=101.41 Aligned_cols=101 Identities=23% Similarity=0.281 Sum_probs=79.2
Q ss_pred CCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCC-----cEEEEeCchhchhhhcCCCCCCCcEE
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNIS-----NATFVQGDLNKIGGDFGNAFPKPDIV 141 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~-----~v~~~~~d~~~~~~~~~~~~~~fD~i 141 (222)
++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.|++++...++. ++++..+|+.+.+. ..+.||+|
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~~D~v 105 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSF----HDSSFDFA 105 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCS----CTTCEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCC----CCCceeEE
Confidence 4789999999999999999988889999999999999999999877762 48999999987653 23589999
Q ss_pred EECCCCCCc--cH---HHHHHHH-hCCCCcEEEEee
Q 043853 142 ISDPNRPGM--HM---KLIKFLL-KLKAPRIVYVSC 171 (222)
Q Consensus 142 i~~pp~~~~--~~---~~~~~l~-~l~~~~~v~~~~ 171 (222)
+++.....+ .. .+++.+. .++|+|.+++..
T Consensus 106 ~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 106 VMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVE 141 (235)
T ss_dssp EEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 997642111 12 4555554 478999988764
No 143
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.44 E-value=1.4e-12 Score=110.04 Aligned_cols=130 Identities=19% Similarity=0.253 Sum_probs=95.2
Q ss_pred CeeEEEcCCccccCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcC--CeEEEEeCCHHHHHHHHHHH
Q 043853 32 GLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWV--KHVYGYEVVPQAISDACRNA 109 (222)
Q Consensus 32 ~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~--~~v~gvD~~~~~i~~a~~n~ 109 (222)
+..+...++.|.+....... +.+.+.+... .+.+|||+|||+|.++..+++.+ .+++++|+|+.+++.|++++
T Consensus 166 ~~~~~~~~gvf~~~~~d~~~---~~ll~~l~~~--~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~ 240 (343)
T 2pjd_A 166 GLTVKTLPGVFSRDGLDVGS---QLLLSTLTPH--TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATL 240 (343)
T ss_dssp TEEEEECTTCTTSSSCCHHH---HHHHHHSCTT--CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHH
T ss_pred ceEEEecCCccCCCCCcHHH---HHHHHhcCcC--CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH
Confidence 56777778888876543322 2333443222 35689999999999999998875 38999999999999999999
Q ss_pred HHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCCCCC-c------cHHHHHHHHh-CCCCcEEEEeeCc
Q 043853 110 KLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPG-M------HMKLIKFLLK-LKAPRIVYVSCNP 173 (222)
Q Consensus 110 ~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~~-~------~~~~~~~l~~-l~~~~~v~~~~~~ 173 (222)
..+++. ++++.+|+.+.. .+.||+|+++||... . ...+++.+.+ ++|+|.+++..+.
T Consensus 241 ~~~~~~-~~~~~~d~~~~~------~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 241 AANGVE-GEVFASNVFSEV------KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp HHTTCC-CEEEECSTTTTC------CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred HHhCCC-CEEEEccccccc------cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 998875 678899987643 147999999998542 1 1344444433 7899998877643
No 144
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.43 E-value=1.5e-12 Score=102.44 Aligned_cols=103 Identities=22% Similarity=0.112 Sum_probs=74.9
Q ss_pred CCCCeEEEEecccchhHHHHhhcC--CeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEE
Q 043853 66 DGSEIVLDLFCGTGTIGLTLARWV--KHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVIS 143 (222)
Q Consensus 66 ~~~~~vlDlg~G~G~~~~~la~~~--~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~ 143 (222)
.++.+|||+|||+|..+..+++.. .+|+|+|+|+.+++.+.++++.. .++.++.+|+.+........ +.||+|++
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~--~~v~~~~~d~~~~~~~~~~~-~~fD~V~~ 132 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER--NNIIPLLFDASKPWKYSGIV-EKVDLIYQ 132 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC--SSEEEECSCTTCGGGTTTTC-CCEEEEEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC--CCeEEEEcCCCCchhhcccc-cceeEEEE
Confidence 357899999999999999888764 59999999999988777776643 46899999987642111111 47999999
Q ss_pred CCCCCCccHHHHHHH-HhCCCCcEEEEee
Q 043853 144 DPNRPGMHMKLIKFL-LKLKAPRIVYVSC 171 (222)
Q Consensus 144 ~pp~~~~~~~~~~~l-~~l~~~~~v~~~~ 171 (222)
+.+.......+++.+ +.|+|+|.++++.
T Consensus 133 ~~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 133 DIAQKNQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp CCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eccChhHHHHHHHHHHHHhCCCCEEEEEE
Confidence 965433222324444 4589999988774
No 145
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.43 E-value=8.8e-13 Score=115.80 Aligned_cols=80 Identities=16% Similarity=0.167 Sum_probs=69.6
Q ss_pred CCCeEEEEecccchhHHHHhhc---CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEE
Q 043853 67 GSEIVLDLFCGTGTIGLTLARW---VKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVIS 143 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~---~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~ 143 (222)
++.+|||+|||+|+.++.+|+. ...|+|+|+|+.+++.+++|++.+|+++++++++|+.++..... +.||.|++
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~---~~fD~Il~ 193 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVP---EMFDAILL 193 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHST---TCEEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhcc---ccCCEEEE
Confidence 5789999999999999999875 25899999999999999999999999889999999988754221 47999999
Q ss_pred CCCCCC
Q 043853 144 DPNRPG 149 (222)
Q Consensus 144 ~pp~~~ 149 (222)
|||+.+
T Consensus 194 D~PcSg 199 (479)
T 2frx_A 194 DAPCSG 199 (479)
T ss_dssp ECCCCC
T ss_pred CCCcCC
Confidence 999653
No 146
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.43 E-value=5.2e-13 Score=110.24 Aligned_cols=99 Identities=19% Similarity=0.162 Sum_probs=76.2
Q ss_pred HHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcC
Q 043853 53 LYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFG 132 (222)
Q Consensus 53 ~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~ 132 (222)
+.+.+.+.+... ++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.+++++. +.++++++++|+.++....
T Consensus 38 i~~~Iv~~l~~~--~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~--~~~~v~vi~gD~l~~~~~~- 112 (295)
T 3gru_A 38 FVNKAVESANLT--KDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKE--LYNNIEIIWGDALKVDLNK- 112 (295)
T ss_dssp HHHHHHHHTTCC--TTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHH--HCSSEEEEESCTTTSCGGG-
T ss_pred HHHHHHHhcCCC--CcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhc--cCCCeEEEECchhhCCccc-
Confidence 344455555433 37899999999999999999888899999999999999999987 3457999999998865431
Q ss_pred CCCCCCcEEEECCCCCCccHHHHHHHH
Q 043853 133 NAFPKPDIVISDPNRPGMHMKLIKFLL 159 (222)
Q Consensus 133 ~~~~~fD~ii~~pp~~~~~~~~~~~l~ 159 (222)
..||.|++|+|+....+-+...+.
T Consensus 113 ---~~fD~Iv~NlPy~is~pil~~lL~ 136 (295)
T 3gru_A 113 ---LDFNKVVANLPYQISSPITFKLIK 136 (295)
T ss_dssp ---SCCSEEEEECCGGGHHHHHHHHHH
T ss_pred ---CCccEEEEeCcccccHHHHHHHHh
Confidence 369999999996544333333443
No 147
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.43 E-value=1e-12 Score=102.74 Aligned_cols=114 Identities=18% Similarity=0.196 Sum_probs=86.1
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhc-CCeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEeCchhchh
Q 043853 51 EVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARW-VKHVYGYEVVPQAISDACRNAKLNNIS-NATFVQGDLNKIG 128 (222)
Q Consensus 51 ~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~-~~~v~gvD~~~~~i~~a~~n~~~~~~~-~v~~~~~d~~~~~ 128 (222)
..+.+.+.+.+... ..+|||+|||+|.++..+++. ..+++|+|+|+.+++.|+++++..++. +++++++|+.+.+
T Consensus 30 ~~~~~~~~~~~~~~---~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 106 (219)
T 3dlc_A 30 PIIAENIINRFGIT---AGTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIP 106 (219)
T ss_dssp HHHHHHHHHHHCCC---EEEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCS
T ss_pred HHHHHHHHHhcCCC---CCEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCC
Confidence 34445555555433 239999999999999999886 459999999999999999999998875 5999999998865
Q ss_pred hhcCCCCCCCcEEEECCC--CCCccHHHHHHHH-hCCCCcEEEEee
Q 043853 129 GDFGNAFPKPDIVISDPN--RPGMHMKLIKFLL-KLKAPRIVYVSC 171 (222)
Q Consensus 129 ~~~~~~~~~fD~ii~~pp--~~~~~~~~~~~l~-~l~~~~~v~~~~ 171 (222)
. +.+.||+|+++.. .......+++.+. .++|+|.+++..
T Consensus 107 ~----~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 107 I----EDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp S----CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred C----CcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEe
Confidence 3 2257999999864 1122345555554 489999988864
No 148
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.42 E-value=1.8e-12 Score=109.19 Aligned_cols=109 Identities=22% Similarity=0.295 Sum_probs=82.1
Q ss_pred HHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCC-eEEEEeCCHHHHHHHHHHHHHcCC-CcEEEEeCchhchhhh
Q 043853 53 LYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVK-HVYGYEVVPQAISDACRNAKLNNI-SNATFVQGDLNKIGGD 130 (222)
Q Consensus 53 ~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~-~v~gvD~~~~~i~~a~~n~~~~~~-~~v~~~~~d~~~~~~~ 130 (222)
+.+.+...+... ++.+|||+|||+|.+++.+++.+. +++|+|+|+ +++.|+++++.++. ++++++++|+.++..
T Consensus 52 ~~~~i~~~~~~~--~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~- 127 (340)
T 2fyt_A 52 YRDFIYQNPHIF--KDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHL- 127 (340)
T ss_dssp HHHHHHHCGGGT--TTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCC-
T ss_pred HHHHHHhhhhhc--CCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcC-
Confidence 334555544333 378999999999999999988654 999999997 99999999999998 469999999987643
Q ss_pred cCCCCCCCcEEEECC-C----CCCccHHHHHHH-HhCCCCcEEE
Q 043853 131 FGNAFPKPDIVISDP-N----RPGMHMKLIKFL-LKLKAPRIVY 168 (222)
Q Consensus 131 ~~~~~~~fD~ii~~p-p----~~~~~~~~~~~l-~~l~~~~~v~ 168 (222)
+.++||+|++++ + .......++..+ +.++|+|.++
T Consensus 128 ---~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 128 ---PVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp ---SCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred ---CCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 124799999987 2 122334455555 3478998876
No 149
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.42 E-value=4.1e-12 Score=97.43 Aligned_cols=129 Identities=22% Similarity=0.226 Sum_probs=89.5
Q ss_pred CCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPN 146 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp 146 (222)
++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.++++. ++++++++|+.+... +.+.||+|+++++
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~-----~~~~~~~~d~~~~~~----~~~~~D~i~~~~~ 116 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQDF-----PEARWVVGDLSVDQI----SETDFDLIVSAGN 116 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTTSCC----CCCCEEEEEECCC
T ss_pred CCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHHhC-----CCCcEEEcccccCCC----CCCceeEEEECCc
Confidence 4789999999999999999988889999999999999999875 358899999987542 1247999999854
Q ss_pred CCC-----ccHHHHHHHH-hCCCCcEEEEeeCccc--hHhhHHHhhccCCCCccCCCeEEeEeeee-ccCCCCC
Q 043853 147 RPG-----MHMKLIKFLL-KLKAPRIVYVSCNPAT--CARDLDYLCHGVGDQNIKGCYKLKSLQPV-DMFPHTP 211 (222)
Q Consensus 147 ~~~-----~~~~~~~~l~-~l~~~~~v~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~p~~~ 211 (222)
.-. ....+++.+. .++++|.+++...... ...++..+.+ +.||++...... +..|...
T Consensus 117 ~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~-------~~Gf~~~~~~~~~~~~~~~~ 183 (195)
T 3cgg_A 117 VMGFLAEDGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAE-------RVGLELENAFESWDLKPFVQ 183 (195)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHH-------HHTEEEEEEESSTTCCBCCT
T ss_pred HHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHH-------HcCCEEeeeecccccCcCCC
Confidence 211 1134444443 3789999887664321 2233333332 568888776433 3444433
No 150
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.41 E-value=5.2e-12 Score=99.24 Aligned_cols=98 Identities=15% Similarity=0.090 Sum_probs=75.2
Q ss_pred CCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCCC
Q 043853 68 SEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNR 147 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~ 147 (222)
+.+|||+|||+|.++..+++.+.+++|+|+|+.+++.|+++ .++++..+|+.++..........||+|+++...
T Consensus 53 ~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l 126 (227)
T 3e8s_A 53 PERVLDLGCGEGWLLRALADRGIEAVGVDGDRTLVDAARAA------GAGEVHLASYAQLAEAKVPVGKDYDLICANFAL 126 (227)
T ss_dssp CSEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHT------CSSCEEECCHHHHHTTCSCCCCCEEEEEEESCC
T ss_pred CCEEEEeCCCCCHHHHHHHHCCCEEEEEcCCHHHHHHHHHh------cccccchhhHHhhcccccccCCCccEEEECchh
Confidence 58999999999999999998888999999999999999987 347888999888733222233469999987542
Q ss_pred -CCccHHHHHHHH-hCCCCcEEEEee
Q 043853 148 -PGMHMKLIKFLL-KLKAPRIVYVSC 171 (222)
Q Consensus 148 -~~~~~~~~~~l~-~l~~~~~v~~~~ 171 (222)
......+++.+. .++|+|.++++.
T Consensus 127 ~~~~~~~~l~~~~~~L~pgG~l~~~~ 152 (227)
T 3e8s_A 127 LHQDIIELLSAMRTLLVPGGALVIQT 152 (227)
T ss_dssp CSSCCHHHHHHHHHTEEEEEEEEEEE
T ss_pred hhhhHHHHHHHHHHHhCCCeEEEEEe
Confidence 122345556554 478999988766
No 151
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.41 E-value=3.8e-12 Score=105.85 Aligned_cols=99 Identities=13% Similarity=0.039 Sum_probs=79.0
Q ss_pred CCCCeEEEEecccchhHHHHhhc-CCeEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhhhcCCCCCCCcEEEE
Q 043853 66 DGSEIVLDLFCGTGTIGLTLARW-VKHVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGDFGNAFPKPDIVIS 143 (222)
Q Consensus 66 ~~~~~vlDlg~G~G~~~~~la~~-~~~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~~~~~~~fD~ii~ 143 (222)
.++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.|++++...++++ +++..+|+.+++ +.||+|++
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-------~~fD~v~~ 161 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA-------EPVDRIVS 161 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC-------CCCSEEEE
T ss_pred CCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC-------CCcCEEEE
Confidence 34789999999999999998876 7799999999999999999999888754 999999997753 37999998
Q ss_pred CCCCC----CccHHHHHHH-HhCCCCcEEEEee
Q 043853 144 DPNRP----GMHMKLIKFL-LKLKAPRIVYVSC 171 (222)
Q Consensus 144 ~pp~~----~~~~~~~~~l-~~l~~~~~v~~~~ 171 (222)
..... .....+++.+ +.++|+|.+++..
T Consensus 162 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 194 (318)
T 2fk8_A 162 IEAFEHFGHENYDDFFKRCFNIMPADGRMTVQS 194 (318)
T ss_dssp ESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred eChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 74311 1224555555 4489999988765
No 152
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.41 E-value=1.1e-12 Score=110.88 Aligned_cols=98 Identities=22% Similarity=0.281 Sum_probs=79.8
Q ss_pred CCCeEEEEecccchhHHHHhhcCC-eEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhhhcCCCCCCCcEEEEC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVK-HVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGDFGNAFPKPDIVISD 144 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~-~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~~~~~~~fD~ii~~ 144 (222)
++.+|||+|||+|.++..+++.+. +|+|+|+|+ +++.|+++++.+++++ ++++++|+.++... .++||+|+++
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~----~~~fD~Iis~ 140 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVELP----VEKVDIIISE 140 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS----SSCEEEEEEC
T ss_pred CCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHccCC----CCceEEEEEc
Confidence 378999999999999999988754 999999995 9999999999999876 99999999887432 2589999998
Q ss_pred CC-----CCCccHHHHHHH-HhCCCCcEEEE
Q 043853 145 PN-----RPGMHMKLIKFL-LKLKAPRIVYV 169 (222)
Q Consensus 145 pp-----~~~~~~~~~~~l-~~l~~~~~v~~ 169 (222)
+. .......++..+ +.++|+|+++.
T Consensus 141 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 141 WMGYCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp CCBBTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred cccccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 73 334456666666 44899998763
No 153
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.41 E-value=6.4e-12 Score=102.84 Aligned_cols=97 Identities=11% Similarity=0.122 Sum_probs=77.8
Q ss_pred CCCeEEEEecccchhHHHHh-hcCCeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEeCchhchhhhcCCCCCCCcEEEEC
Q 043853 67 GSEIVLDLFCGTGTIGLTLA-RWVKHVYGYEVVPQAISDACRNAKLNNIS-NATFVQGDLNKIGGDFGNAFPKPDIVISD 144 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la-~~~~~v~gvD~~~~~i~~a~~n~~~~~~~-~v~~~~~d~~~~~~~~~~~~~~fD~ii~~ 144 (222)
++.+|||+|||+|.++..++ +.+.+++|+|+|+.+++.|++++...+.. ++++..+|+.+++ +.||+|++.
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-------~~fD~v~~~ 136 (287)
T 1kpg_A 64 PGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD-------EPVDRIVSI 136 (287)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC-------CCCSEEEEE
T ss_pred CcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC-------CCeeEEEEe
Confidence 47899999999999999888 45669999999999999999999988775 5999999997653 379999987
Q ss_pred CC-----CCCccHHHHHHH-HhCCCCcEEEEee
Q 043853 145 PN-----RPGMHMKLIKFL-LKLKAPRIVYVSC 171 (222)
Q Consensus 145 pp-----~~~~~~~~~~~l-~~l~~~~~v~~~~ 171 (222)
.. ... ...+++.+ +.++|+|.+++..
T Consensus 137 ~~l~~~~~~~-~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 137 GAFEHFGHER-YDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp SCGGGTCTTT-HHHHHHHHHHHSCTTCEEEEEE
T ss_pred CchhhcChHH-HHHHHHHHHHhcCCCCEEEEEE
Confidence 42 122 34555555 4489999988765
No 154
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.41 E-value=2.8e-12 Score=111.31 Aligned_cols=81 Identities=22% Similarity=0.187 Sum_probs=68.8
Q ss_pred CCCCeEEEEecccchhHHHHhhcC--CeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEE
Q 043853 66 DGSEIVLDLFCGTGTIGLTLARWV--KHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVIS 143 (222)
Q Consensus 66 ~~~~~vlDlg~G~G~~~~~la~~~--~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~ 143 (222)
.++.+|||+|||+|+.+..+++.. .+++|+|+|+.+++.+++|++.+++. ++++++|+.+....+. .+.||.|++
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~-~~~~~~D~~~~~~~~~--~~~fD~Vl~ 321 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMK-ATVKQGDGRYPSQWCG--EQQFDRILL 321 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCC-CEEEECCTTCTHHHHT--TCCEEEEEE
T ss_pred CCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCC-eEEEeCchhhchhhcc--cCCCCEEEE
Confidence 347899999999999999998765 59999999999999999999999884 8999999988753222 247999999
Q ss_pred CCCCCC
Q 043853 144 DPNRPG 149 (222)
Q Consensus 144 ~pp~~~ 149 (222)
|||+.+
T Consensus 322 D~Pcsg 327 (429)
T 1sqg_A 322 DAPCSA 327 (429)
T ss_dssp ECCCCC
T ss_pred eCCCCc
Confidence 999654
No 155
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.41 E-value=1.4e-12 Score=112.51 Aligned_cols=153 Identities=14% Similarity=0.093 Sum_probs=97.9
Q ss_pred CccccCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhc---CCeEEEEeCCHHHHHHHHHHHHHcCCCc
Q 043853 40 NSFFQTNTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARW---VKHVYGYEVVPQAISDACRNAKLNNISN 116 (222)
Q Consensus 40 ~~f~~~~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~---~~~v~gvD~~~~~i~~a~~n~~~~~~~~ 116 (222)
+.|+. +....+. +.+.+.. .++.+|||+|||+|.+++.+++. ..+++|+|+++.+++.| .+
T Consensus 19 g~~~T-P~~l~~~----~~~~~~~--~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------~~ 82 (421)
T 2ih2_A 19 GRVET-PPEVVDF----MVSLAEA--PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------PW 82 (421)
T ss_dssp --CCC-CHHHHHH----HHHHCCC--CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------TT
T ss_pred ceEeC-CHHHHHH----HHHhhcc--CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------CC
Confidence 44554 3444444 4444432 23569999999999999988874 45999999999999887 36
Q ss_pred EEEEeCchhchhhhcCCCCCCCcEEEECCCCCCcc----------H---------------------HHHHH-HHhCCCC
Q 043853 117 ATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMH----------M---------------------KLIKF-LLKLKAP 164 (222)
Q Consensus 117 v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~~~~----------~---------------------~~~~~-l~~l~~~ 164 (222)
++++++|+.+... .+.||+|++|||+.... . .+++. +..++++
T Consensus 83 ~~~~~~D~~~~~~-----~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~ 157 (421)
T 2ih2_A 83 AEGILADFLLWEP-----GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPG 157 (421)
T ss_dssp EEEEESCGGGCCC-----SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEE
T ss_pred CcEEeCChhhcCc-----cCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCC
Confidence 8999999987642 24799999999953211 1 22332 3347888
Q ss_pred cEEEEeeCcc----chHhhHHHhhccCCCCccCCCe-EEeEeeeeccCCCCCceeEEEEEEeC
Q 043853 165 RIVYVSCNPA----TCARDLDYLCHGVGDQNIKGCY-KLKSLQPVDMFPHTPHIECVCLLELS 222 (222)
Q Consensus 165 ~~v~~~~~~~----~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~v~~~~~~ 222 (222)
|.+.+..... .....+..+.. +.++ .+..+. ..|+.+..-.++..++++
T Consensus 158 G~~~~i~p~~~l~~~~~~~lr~~l~-------~~~~~~i~~l~--~~F~~~~~~~~il~~~k~ 211 (421)
T 2ih2_A 158 GVLVFVVPATWLVLEDFALLREFLA-------REGKTSVYYLG--EVFPQKKVSAVVIRFQKS 211 (421)
T ss_dssp EEEEEEEEGGGGTCGGGHHHHHHHH-------HHSEEEEEEEE--SCSTTCCCCEEEEEEESS
T ss_pred CEEEEEEChHHhcCccHHHHHHHHH-------hcCCeEEEECC--CCCCCCCccEEEEEEEeC
Confidence 8776554322 12233433321 3444 344333 778888877888887763
No 156
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.41 E-value=3.7e-12 Score=104.76 Aligned_cols=115 Identities=17% Similarity=0.118 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHh----cCCCCCCCeEEEEecccchhHHHHhhc-CCeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEeCc
Q 043853 50 AEVLYKLIEDCA----GLRDDGSEIVLDLFCGTGTIGLTLARW-VKHVYGYEVVPQAISDACRNAKLNNIS-NATFVQGD 123 (222)
Q Consensus 50 ~~~~~~~i~~~~----~~~~~~~~~vlDlg~G~G~~~~~la~~-~~~v~gvD~~~~~i~~a~~n~~~~~~~-~v~~~~~d 123 (222)
.....+.+.+.+ ... ++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.|+++++..+++ +++++++|
T Consensus 63 ~~~~~~~l~~~l~~~~~~~--~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d 140 (297)
T 2o57_A 63 SLRTDEWLASELAMTGVLQ--RQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGS 140 (297)
T ss_dssp HHHHHHHHHHHHHHTTCCC--TTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECC
T ss_pred HHHHHHHHHHHhhhccCCC--CCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcC
Confidence 333445555554 333 4789999999999999998876 669999999999999999999988885 59999999
Q ss_pred hhchhhhcCCCCCCCcEEEECCC---CCCccHHHHHHHHh-CCCCcEEEEee
Q 043853 124 LNKIGGDFGNAFPKPDIVISDPN---RPGMHMKLIKFLLK-LKAPRIVYVSC 171 (222)
Q Consensus 124 ~~~~~~~~~~~~~~fD~ii~~pp---~~~~~~~~~~~l~~-l~~~~~v~~~~ 171 (222)
+.+.+. +.+.||+|++... ... ...+++.+.+ ++|+|.+++..
T Consensus 141 ~~~~~~----~~~~fD~v~~~~~l~~~~~-~~~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 141 FLEIPC----EDNSYDFIWSQDAFLHSPD-KLKVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp TTSCSS----CTTCEEEEEEESCGGGCSC-HHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccCCC----CCCCEeEEEecchhhhcCC-HHHHHHHHHHHcCCCeEEEEEE
Confidence 988653 2257999998753 122 3455555544 79999888765
No 157
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.41 E-value=3.6e-12 Score=102.38 Aligned_cols=98 Identities=20% Similarity=0.207 Sum_probs=77.1
Q ss_pred CCCeEEEEecccchhHHHHhhcCC-eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVK-HVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDP 145 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~-~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~p 145 (222)
++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.|+++.. ..+++++++|+.+++. +.+.||+|++..
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~~~----~~~~fD~v~~~~ 116 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT---SPVVCYEQKAIEDIAI----EPDAYNVVLSSL 116 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC---CTTEEEEECCGGGCCC----CTTCEEEEEEES
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc---cCCeEEEEcchhhCCC----CCCCeEEEEEch
Confidence 478999999999999999988776 99999999999999998865 3469999999987653 235899999976
Q ss_pred CC--CCccHHHHHHHHh-CCCCcEEEEee
Q 043853 146 NR--PGMHMKLIKFLLK-LKAPRIVYVSC 171 (222)
Q Consensus 146 p~--~~~~~~~~~~l~~-l~~~~~v~~~~ 171 (222)
.. ..-...+++.+.+ ++|+|.++++.
T Consensus 117 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 145 (253)
T 3g5l_A 117 ALHYIASFDDICKKVYINLKSSGSFIFSV 145 (253)
T ss_dssp CGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhhhhhHHHHHHHHHHHcCCCcEEEEEe
Confidence 41 1123455555544 89999998863
No 158
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.40 E-value=4e-12 Score=113.27 Aligned_cols=165 Identities=19% Similarity=0.239 Sum_probs=107.7
Q ss_pred CCccccCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhc--------------------CCeEEEEeCC
Q 043853 39 ANSFFQTNTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARW--------------------VKHVYGYEVV 98 (222)
Q Consensus 39 ~~~f~~~~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~--------------------~~~v~gvD~~ 98 (222)
.+.||.+ ......++ +.+. +.++.+|+|++||+|++++.+++. ...++|+|++
T Consensus 148 ~G~fyTP-~~iv~~mv----~~l~--p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid 220 (541)
T 2ar0_A 148 AGQYFTP-RPLIKTII----HLLK--PQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELV 220 (541)
T ss_dssp --CCCCC-HHHHHHHH----HHHC--CCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESC
T ss_pred CCeeeCC-HHHHHHHH----HHhc--cCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCC
Confidence 3566643 45544444 3333 234679999999999999877643 1379999999
Q ss_pred HHHHHHHHHHHHHcCCCc-----EEEEeCchhchhhhcCCCCCCCcEEEECCCCCCcc----------------HHHHHH
Q 043853 99 PQAISDACRNAKLNNISN-----ATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMH----------------MKLIKF 157 (222)
Q Consensus 99 ~~~i~~a~~n~~~~~~~~-----v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~~~~----------------~~~~~~ 157 (222)
+.+++.|+.|+..+++.+ +.+.++|....... ....||+|++|||+.... ..++..
T Consensus 221 ~~~~~lA~~nl~l~gi~~~~~~~~~I~~gDtL~~~~~---~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~ 297 (541)
T 2ar0_A 221 PGTRRLALMNCLLHDIEGNLDHGGAIRLGNTLGSDGE---NLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQH 297 (541)
T ss_dssp HHHHHHHHHHHHTTTCCCBGGGTBSEEESCTTSHHHH---TSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCccccccCCeEeCCCcccccc---cccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHH
Confidence 999999999999988875 88999998765432 124799999999954321 134444
Q ss_pred -HHhCCCCcEEEEeeCccc-----hHhhHH-HhhccCCCCccCCC-eEEeEeeeeccCCCCCceeEEEEEEe
Q 043853 158 -LLKLKAPRIVYVSCNPAT-----CARDLD-YLCHGVGDQNIKGC-YKLKSLQPVDMFPHTPHIECVCLLEL 221 (222)
Q Consensus 158 -l~~l~~~~~v~~~~~~~~-----~~~~~~-~l~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~v~~~~~ 221 (222)
+..++++|.+.+-+.... ....++ .+. +.+ ..-...-|..+|+.+....+|.+|.+
T Consensus 298 ~l~~Lk~gGr~a~V~p~~~L~~~~~~~~iR~~L~--------~~~~l~~ii~Lp~~~F~~t~v~t~Ilvl~k 361 (541)
T 2ar0_A 298 IIETLHPGGRAAVVVPDNVLFEGGKGTDIRRDLM--------DKCHLHTILRLPTGIFYAQGVKTNVLFFTK 361 (541)
T ss_dssp HHHHEEEEEEEEEEEEHHHHHCCTHHHHHHHHHH--------HHEEEEEEEECCSSCSSSCSCCEEEEEEEE
T ss_pred HHHHhCCCCEEEEEecCcceecCcHHHHHHHHHh--------hcCCEEEEEEcCcCcccCCCCcEEEEEEEC
Confidence 445788777654443221 123333 332 222 22222335678988888899999986
No 159
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.40 E-value=6.3e-13 Score=106.36 Aligned_cols=101 Identities=10% Similarity=-0.033 Sum_probs=77.5
Q ss_pred CCCeEEEEecccchhHHHHhhcC-CeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWV-KHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDP 145 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~-~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~p 145 (222)
++.+|||||||+|..+..+++.. .++++||+||.+++.|+++....+. +++++.+|+.+....+. .+.||.|+.|+
T Consensus 60 ~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~-~~~~~~~~a~~~~~~~~--~~~FD~i~~D~ 136 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTH-KVIPLKGLWEDVAPTLP--DGHFDGILYDT 136 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSS-EEEEEESCHHHHGGGSC--TTCEEEEEECC
T ss_pred CCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCC-ceEEEeehHHhhccccc--ccCCceEEEee
Confidence 47899999999999999998764 4899999999999999999887665 58999999988765443 25799999987
Q ss_pred CCCC-------ccHHHHHHH-HhCCCCcEEEEe
Q 043853 146 NRPG-------MHMKLIKFL-LKLKAPRIVYVS 170 (222)
Q Consensus 146 p~~~-------~~~~~~~~l-~~l~~~~~v~~~ 170 (222)
.... ....+++.+ +.|+|||++.+.
T Consensus 137 ~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 137 YPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp CCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred eecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 4211 123444444 448999987643
No 160
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.40 E-value=7.7e-12 Score=103.98 Aligned_cols=82 Identities=11% Similarity=0.200 Sum_probs=69.0
Q ss_pred CCCCeEEEEecccchhHHHHhhc---CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEE
Q 043853 66 DGSEIVLDLFCGTGTIGLTLARW---VKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVI 142 (222)
Q Consensus 66 ~~~~~vlDlg~G~G~~~~~la~~---~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii 142 (222)
.++.+|||+|||+|+.++.+++. ..+|+|+|+++.+++.+++|++.+|+++++++++|+.++..... ....||.|+
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~-~~~~fD~Vl 179 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDP-RYHEVHYIL 179 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCG-GGTTEEEEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCcccc-ccCCCCEEE
Confidence 34789999999999999998874 35999999999999999999999999889999999988653211 013699999
Q ss_pred ECCCCC
Q 043853 143 SDPNRP 148 (222)
Q Consensus 143 ~~pp~~ 148 (222)
+|||+.
T Consensus 180 ~D~PcS 185 (309)
T 2b9e_A 180 LDPSCS 185 (309)
T ss_dssp ECCCCC
T ss_pred EcCCcC
Confidence 999954
No 161
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.40 E-value=6.7e-12 Score=105.43 Aligned_cols=103 Identities=17% Similarity=0.137 Sum_probs=80.0
Q ss_pred CCCeEEEEecccchhHHHHhhc--CCeEEEEeCCHHHHHHHHHHHHHc--CC--CcEEEEeCchhchhhhcCCCCCCCcE
Q 043853 67 GSEIVLDLFCGTGTIGLTLARW--VKHVYGYEVVPQAISDACRNAKLN--NI--SNATFVQGDLNKIGGDFGNAFPKPDI 140 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~--~~~v~gvD~~~~~i~~a~~n~~~~--~~--~~v~~~~~d~~~~~~~~~~~~~~fD~ 140 (222)
+..+|||+|||+|.++..+++. ..+++++|+|+.+++.|++++... ++ ++++++.+|+.++..... .+.||+
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~--~~~fDl 197 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAA--EGSYDA 197 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSC--TTCEEE
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhcc--CCCccE
Confidence 4679999999999999999876 359999999999999999998753 33 469999999988754321 247999
Q ss_pred EEECCCCCC-----c-cHHHHHHHHh-CCCCcEEEEee
Q 043853 141 VISDPNRPG-----M-HMKLIKFLLK-LKAPRIVYVSC 171 (222)
Q Consensus 141 ii~~pp~~~-----~-~~~~~~~l~~-l~~~~~v~~~~ 171 (222)
|++|++... + ...+.+.+.+ |+++|++++.+
T Consensus 198 Ii~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 198 VIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp EEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 999986211 1 3566666544 89999998864
No 162
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.40 E-value=1.5e-12 Score=103.39 Aligned_cols=110 Identities=21% Similarity=0.174 Sum_probs=82.8
Q ss_pred HHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhc--CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhc
Q 043853 54 YKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARW--VKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDF 131 (222)
Q Consensus 54 ~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~--~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~ 131 (222)
++.+...+.. ..++.+|||+|||+|.++..+++. ..+++|+|+|+.+++.|++++...+ +++++++|+.+.+..
T Consensus 32 ~~~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~~~~~~- 107 (234)
T 3dtn_A 32 YGVSVSIASV-DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL--KVKYIEADYSKYDFE- 107 (234)
T ss_dssp HHHHHHTCCC-SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT--TEEEEESCTTTCCCC-
T ss_pred HHHHHHHhhc-CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC--CEEEEeCchhccCCC-
Confidence 3445555432 235789999999999999999887 5599999999999999999986554 799999999887543
Q ss_pred CCCCCCCcEEEECCCCCCccH----HHHHHHH-hCCCCcEEEEee
Q 043853 132 GNAFPKPDIVISDPNRPGMHM----KLIKFLL-KLKAPRIVYVSC 171 (222)
Q Consensus 132 ~~~~~~fD~ii~~pp~~~~~~----~~~~~l~-~l~~~~~v~~~~ 171 (222)
+.||+|+++.....+.. .+++.+. .++|+|.+++..
T Consensus 108 ----~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 108 ----EKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp ----SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ----CCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 48999999875222221 2455554 489999988765
No 163
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.40 E-value=1.4e-12 Score=105.67 Aligned_cols=90 Identities=11% Similarity=0.005 Sum_probs=70.4
Q ss_pred HHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCC
Q 043853 54 YKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGN 133 (222)
Q Consensus 54 ~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~ 133 (222)
.+.+.+.+... ++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.+++++.. .++++++++|+.++......
T Consensus 18 ~~~iv~~~~~~--~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~--~~~v~~i~~D~~~~~~~~~~ 93 (255)
T 3tqs_A 18 LQKIVSAIHPQ--KTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQ--QKNITIYQNDALQFDFSSVK 93 (255)
T ss_dssp HHHHHHHHCCC--TTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTT--CTTEEEEESCTTTCCGGGSC
T ss_pred HHHHHHhcCCC--CcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhh--CCCcEEEEcchHhCCHHHhc
Confidence 34455555433 378999999999999999998888999999999999999999864 45799999999887543211
Q ss_pred CCCCCcEEEECCCCC
Q 043853 134 AFPKPDIVISDPNRP 148 (222)
Q Consensus 134 ~~~~fD~ii~~pp~~ 148 (222)
...+|| |++|+|+.
T Consensus 94 ~~~~~~-vv~NlPY~ 107 (255)
T 3tqs_A 94 TDKPLR-VVGNLPYN 107 (255)
T ss_dssp CSSCEE-EEEECCHH
T ss_pred cCCCeE-EEecCCcc
Confidence 123577 99999964
No 164
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.39 E-value=3.9e-12 Score=102.05 Aligned_cols=99 Identities=29% Similarity=0.266 Sum_probs=77.3
Q ss_pred CCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPN 146 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp 146 (222)
++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.|++++...+. +++++++|+.+.... +.||+|++...
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~-~v~~~~~d~~~~~~~-----~~fD~v~~~~~ 114 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKERNL-KIEFLQGDVLEIAFK-----NEFDAVTMFFS 114 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CCEEEESCGGGCCCC-----SCEEEEEECSS
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEECChhhcccC-----CCccEEEEcCC
Confidence 467999999999999999998888999999999999999999988776 599999999886432 47999997532
Q ss_pred ---CC--CccHHHHHHH-HhCCCCcEEEEee
Q 043853 147 ---RP--GMHMKLIKFL-LKLKAPRIVYVSC 171 (222)
Q Consensus 147 ---~~--~~~~~~~~~l-~~l~~~~~v~~~~ 171 (222)
.. .....+++.+ +.++|+|.++++.
T Consensus 115 ~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 115 TIMYFDEEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp GGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhcCCHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 11 1123344444 3478999988764
No 165
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.39 E-value=4.7e-12 Score=98.29 Aligned_cols=98 Identities=17% Similarity=0.091 Sum_probs=77.9
Q ss_pred CCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCCC
Q 043853 68 SEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNR 147 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~ 147 (222)
+ +|||+|||+|.++..+++.+.+++|+|+|+.+++.|+++....+. ++++.++|+.+... +.+.||+|++....
T Consensus 31 ~-~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~----~~~~fD~v~~~~~~ 104 (202)
T 2kw5_A 31 G-KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLAQEKGV-KITTVQSNLADFDI----VADAWEGIVSIFCH 104 (202)
T ss_dssp S-EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHTC-CEEEECCBTTTBSC----CTTTCSEEEEECCC
T ss_pred C-CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcChhhcCC----CcCCccEEEEEhhc
Confidence 5 999999999999999998778999999999999999999988777 69999999987642 22579999986542
Q ss_pred CC--ccHHHHHHHHh-CCCCcEEEEee
Q 043853 148 PG--MHMKLIKFLLK-LKAPRIVYVSC 171 (222)
Q Consensus 148 ~~--~~~~~~~~l~~-l~~~~~v~~~~ 171 (222)
.. ....+++.+.+ ++|+|.+++.+
T Consensus 105 ~~~~~~~~~l~~~~~~L~pgG~l~~~~ 131 (202)
T 2kw5_A 105 LPSSLRQQLYPKVYQGLKPGGVFILEG 131 (202)
T ss_dssp CCHHHHHHHHHHHHTTCCSSEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 21 12344444444 78999988775
No 166
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.39 E-value=2.7e-12 Score=101.79 Aligned_cols=117 Identities=10% Similarity=0.039 Sum_probs=82.1
Q ss_pred CCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCC-CCCCcEEEECC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNA-FPKPDIVISDP 145 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~fD~ii~~p 145 (222)
++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.|+++ .++++++++|+.+.... . .+.||+|++++
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~~---~~~~~fD~v~~~~ 119 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARAN-----APHADVYEWNGKGELPA---GLGAPFGLIVSRR 119 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHH-----CTTSEEEECCSCSSCCT---TCCCCEEEEEEES
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHh-----CCCceEEEcchhhccCC---cCCCCEEEEEeCC
Confidence 478999999999999999998888999999999999999998 34689999999543221 1 25899999985
Q ss_pred CCCCccHHHHHHHHhCCCCcEEEEeeCccchHhhHHHhhccCCCCccCCCeEEeEee
Q 043853 146 NRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQ 202 (222)
Q Consensus 146 p~~~~~~~~~~~l~~l~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 202 (222)
....... +..+.++|+|.++......+...-...+. +.||+.....
T Consensus 120 ~~~~~l~---~~~~~LkpgG~l~~~~~~~~~~~~~~~l~--------~~Gf~~~~~~ 165 (226)
T 3m33_A 120 GPTSVIL---RLPELAAPDAHFLYVGPRLNVPEVPERLA--------AVGWDIVAED 165 (226)
T ss_dssp CCSGGGG---GHHHHEEEEEEEEEEESSSCCTHHHHHHH--------HTTCEEEEEE
T ss_pred CHHHHHH---HHHHHcCCCcEEEEeCCcCCHHHHHHHHH--------HCCCeEEEEE
Confidence 4333222 33344689998884433333333333332 4566655544
No 167
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.39 E-value=8.5e-13 Score=107.04 Aligned_cols=105 Identities=18% Similarity=0.224 Sum_probs=79.6
Q ss_pred HHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhc
Q 043853 52 VLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDF 131 (222)
Q Consensus 52 ~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~ 131 (222)
.+++++.+.. +...+|||+|||+|.++..+++.+.+|+|+|+|+.|++.|++ .++++++++|+.+++.
T Consensus 28 ~l~~~l~~~~----~~~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~~a~~------~~~v~~~~~~~e~~~~-- 95 (257)
T 4hg2_A 28 ALFRWLGEVA----PARGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIRQALR------HPRVTYAVAPAEDTGL-- 95 (257)
T ss_dssp HHHHHHHHHS----SCSSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHHTCCC------CTTEEEEECCTTCCCC--
T ss_pred HHHHHHHHhc----CCCCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhhhhhh------cCCceeehhhhhhhcc--
Confidence 4556666654 235689999999999999999988999999999999998864 2479999999988754
Q ss_pred CCCCCCCcEEEECCC--CCCccHHHHHHHH-hCCCCcEEEEee
Q 043853 132 GNAFPKPDIVISDPN--RPGMHMKLIKFLL-KLKAPRIVYVSC 171 (222)
Q Consensus 132 ~~~~~~fD~ii~~pp--~~~~~~~~~~~l~-~l~~~~~v~~~~ 171 (222)
+.+.||+|++.-. +... ..++..+. .|+|+|++.+.+
T Consensus 96 --~~~sfD~v~~~~~~h~~~~-~~~~~e~~rvLkpgG~l~~~~ 135 (257)
T 4hg2_A 96 --PPASVDVAIAAQAMHWFDL-DRFWAELRRVARPGAVFAAVT 135 (257)
T ss_dssp --CSSCEEEEEECSCCTTCCH-HHHHHHHHHHEEEEEEEEEEE
T ss_pred --cCCcccEEEEeeehhHhhH-HHHHHHHHHHcCCCCEEEEEE
Confidence 2358999999753 2232 44555554 489999876554
No 168
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.38 E-value=3e-12 Score=117.28 Aligned_cols=127 Identities=22% Similarity=0.242 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcC--------------------------------------
Q 043853 48 HQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWV-------------------------------------- 89 (222)
Q Consensus 48 ~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~-------------------------------------- 89 (222)
++.+.+...+..++... ++..++|++||+|++++.+|..+
T Consensus 173 pl~e~LAa~ll~~~~~~--~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~ 250 (703)
T 3v97_A 173 PIKETLAAAIVMRSGWQ--PGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARK 250 (703)
T ss_dssp SSCHHHHHHHHHHTTCC--TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHhhCCC--CCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhh
Confidence 46666777777766433 37789999999999999776531
Q ss_pred ------CeEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhhhcCCCCCCCcEEEECCCCCC---c-------cH
Q 043853 90 ------KHVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPG---M-------HM 152 (222)
Q Consensus 90 ------~~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~~---~-------~~ 152 (222)
.+++|+|+|+.+++.|+.|+..+|+++ +++.++|+.++..... .+.||+|++|||+.. . ..
T Consensus 251 ~~~~~~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~--~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~ 328 (703)
T 3v97_A 251 GLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLP--KGPYGTVLSNPPYGERLDSEPALIALHS 328 (703)
T ss_dssp HHHHCCCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCT--TCCCCEEEECCCCCC---CCHHHHHHHH
T ss_pred ccccCCccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccc--cCCCCEEEeCCCccccccchhHHHHHHH
Confidence 379999999999999999999999987 9999999988643211 127999999999532 1 22
Q ss_pred HHHHHHHhCCCCcEEEEeeCccchHh
Q 043853 153 KLIKFLLKLKAPRIVYVSCNPATCAR 178 (222)
Q Consensus 153 ~~~~~l~~l~~~~~v~~~~~~~~~~~ 178 (222)
.+.+.++.+.+++.+++-+....+.+
T Consensus 329 ~l~~~lk~~~~g~~~~ilt~~~~l~~ 354 (703)
T 3v97_A 329 LLGRIMKNQFGGWNLSLFSASPDLLS 354 (703)
T ss_dssp HHHHHHHHHCTTCEEEEEESCHHHHH
T ss_pred HHHHHHHhhCCCCeEEEEeCCHHHHH
Confidence 23334444567777776665534433
No 169
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.38 E-value=3.7e-12 Score=106.76 Aligned_cols=110 Identities=29% Similarity=0.376 Sum_probs=82.1
Q ss_pred HHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcC-CeEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhh
Q 043853 52 VLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWV-KHVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGG 129 (222)
Q Consensus 52 ~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~-~~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~ 129 (222)
.+.+.+....... ++.+|||+|||+|.+++.+++.+ .+++|+|+| .+++.|+++++.+++++ ++++++|+.++..
T Consensus 25 ~y~~ai~~~~~~~--~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~ 101 (328)
T 1g6q_1 25 SYRNAIIQNKDLF--KDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHL 101 (328)
T ss_dssp HHHHHHHHHHHHH--TTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCC
T ss_pred HHHHHHHhhHhhc--CCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccC
Confidence 3344444333323 36799999999999999888865 499999999 59999999999999864 9999999988643
Q ss_pred hcCCCCCCCcEEEECCCC-----CCccHHHHHHH-HhCCCCcEEE
Q 043853 130 DFGNAFPKPDIVISDPNR-----PGMHMKLIKFL-LKLKAPRIVY 168 (222)
Q Consensus 130 ~~~~~~~~fD~ii~~pp~-----~~~~~~~~~~l-~~l~~~~~v~ 168 (222)
. .++||+|+++++. ......++..+ +.++|+|.++
T Consensus 102 ~----~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 102 P----FPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp S----SSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred C----CCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEE
Confidence 1 2479999998752 22234555555 4478998876
No 170
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=99.38 E-value=3.2e-11 Score=107.25 Aligned_cols=173 Identities=16% Similarity=0.156 Sum_probs=112.2
Q ss_pred CCccccCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhc-----CCeEEEEeCCHHHHHHHHHHHHHcC
Q 043853 39 ANSFFQTNTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARW-----VKHVYGYEVVPQAISDACRNAKLNN 113 (222)
Q Consensus 39 ~~~f~~~~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~-----~~~v~gvD~~~~~i~~a~~n~~~~~ 113 (222)
.+.||. +......+++++.... .+.++.+|+|++||+|++.+.+++. ...++|+|+++.++..|+.|+..+|
T Consensus 196 ~G~fyT-P~~Vv~lmv~ll~~~~--~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g 272 (542)
T 3lkd_A 196 AGEFYT-PQPVAKLMTQIAFLGR--EDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHG 272 (542)
T ss_dssp CSSCCC-CHHHHHHHHHHHHTTC--TTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTT
T ss_pred CCeecc-cHHHHHHHHHHHhccc--CCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcC
Confidence 355664 4666666655543211 1234779999999999999977764 3489999999999999999999999
Q ss_pred C--CcEEEEeCchhchhhhcCCCCCCCcEEEECCCCCCcc-------------------------HHHHH-HHHhCC-CC
Q 043853 114 I--SNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMH-------------------------MKLIK-FLLKLK-AP 164 (222)
Q Consensus 114 ~--~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~~~~-------------------------~~~~~-~l~~l~-~~ 164 (222)
+ +++.+.++|........ ....+||+|++|||+.... -.++. .+..++ ++
T Consensus 273 i~~~~~~I~~gDtL~~d~p~-~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~g 351 (542)
T 3lkd_A 273 VPIENQFLHNADTLDEDWPT-QEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDN 351 (542)
T ss_dssp CCGGGEEEEESCTTTSCSCC-SSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTT
T ss_pred CCcCccceEecceecccccc-cccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCc
Confidence 8 46899999987652110 1225799999999942100 11333 344578 88
Q ss_pred cEEEEeeCccch-----HhhHH-HhhccCCCCccCCCeEEeEeeeeccCCCCCceeEEEEEEeC
Q 043853 165 RIVYVSCNPATC-----ARDLD-YLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLLELS 222 (222)
Q Consensus 165 ~~v~~~~~~~~~-----~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~~~~~~ 222 (222)
|.+.+-+....+ ...++ .+.+ .....-.-.-|-.+|..+..-.+|.+|.|+
T Consensus 352 Gr~a~VlP~g~Lf~~~~~~~iRk~Lle-------~~~l~~II~LP~~lF~~t~i~t~Ilvl~K~ 408 (542)
T 3lkd_A 352 GVMAIVLPHGVLFRGNAEGTIRKALLE-------EGAIDTVIGLPANIFFNTSIPTTVIILKKN 408 (542)
T ss_dssp CEEEEEEETHHHHCCTHHHHHHHHHHH-------TTCEEEEEECCSSCSSSCCCCEEEEEECSS
T ss_pred eeEEEEecchHhhCCchhHHHHHHHHh-------CCceeEEEEccccccCCCCCcEEEEEEecC
Confidence 876444322211 23333 3321 223333333366889988889999998763
No 171
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.38 E-value=6.2e-12 Score=98.30 Aligned_cols=95 Identities=17% Similarity=0.191 Sum_probs=74.5
Q ss_pred CCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPN 146 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp 146 (222)
++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.|++++ ++++..+|+.+++. .+.||+|+++..
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~d~~~~~~-----~~~fD~v~~~~~ 111 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRL------GRPVRTMLFHQLDA-----IDAYDAVWAHAC 111 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------TSCCEECCGGGCCC-----CSCEEEEEECSC
T ss_pred CCCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhc------CCceEEeeeccCCC-----CCcEEEEEecCc
Confidence 4779999999999999999988889999999999999999987 46788899887652 258999999864
Q ss_pred CCC----ccHHHHHHHH-hCCCCcEEEEeeC
Q 043853 147 RPG----MHMKLIKFLL-KLKAPRIVYVSCN 172 (222)
Q Consensus 147 ~~~----~~~~~~~~l~-~l~~~~~v~~~~~ 172 (222)
... ....+++.+. .++|+|.++++..
T Consensus 112 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 142 (211)
T 3e23_A 112 LLHVPRDELADVLKLIWRALKPGGLFYASYK 142 (211)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhcCHHHHHHHHHHHHHhcCCCcEEEEEEc
Confidence 211 1234444443 4789999987763
No 172
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.38 E-value=2.7e-12 Score=108.44 Aligned_cols=111 Identities=21% Similarity=0.254 Sum_probs=81.3
Q ss_pred HHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcC-CeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEeCchhchhhh
Q 043853 53 LYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWV-KHVYGYEVVPQAISDACRNAKLNNIS-NATFVQGDLNKIGGD 130 (222)
Q Consensus 53 ~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~-~~v~gvD~~~~~i~~a~~n~~~~~~~-~v~~~~~d~~~~~~~ 130 (222)
+.+.+...+... ++.+|||+|||+|.++..+++.+ .+|+|+|+|+ +++.|+++++.++++ +++++.+|+.++...
T Consensus 38 y~~~i~~~l~~~--~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~ 114 (348)
T 2y1w_A 38 YQRAILQNHTDF--KDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP 114 (348)
T ss_dssp HHHHHHHTGGGT--TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS
T ss_pred HHHHHHhccccC--CcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCC
Confidence 344454444333 37899999999999999888764 4999999996 889999999999984 699999999886422
Q ss_pred cCCCCCCCcEEEECCCCC----CccHHHHHHH-HhCCCCcEEEEee
Q 043853 131 FGNAFPKPDIVISDPNRP----GMHMKLIKFL-LKLKAPRIVYVSC 171 (222)
Q Consensus 131 ~~~~~~~fD~ii~~pp~~----~~~~~~~~~l-~~l~~~~~v~~~~ 171 (222)
++||+|+++++.. ......+..+ +.|+|+|.++++.
T Consensus 115 -----~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 115 -----EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp -----SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred -----CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 4799999997621 1112333333 3478999887543
No 173
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.37 E-value=4.6e-12 Score=102.02 Aligned_cols=100 Identities=17% Similarity=0.017 Sum_probs=77.8
Q ss_pred CCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPN 146 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp 146 (222)
++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.|++++ ..+.+++++..+|+.+++. +.+.||+|++...
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~~----~~~~fD~v~~~~~ 113 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKI-AGVDRKVQVVQADARAIPL----PDESVHGVIVVHL 113 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHT-TTSCTTEEEEESCTTSCCS----CTTCEEEEEEESC
T ss_pred CCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-hccCCceEEEEcccccCCC----CCCCeeEEEECCc
Confidence 4789999999999999999988889999999999999999998 4444579999999987642 2257999999754
Q ss_pred C--CCccHHHHHHH-HhCCCCcEEEEee
Q 043853 147 R--PGMHMKLIKFL-LKLKAPRIVYVSC 171 (222)
Q Consensus 147 ~--~~~~~~~~~~l-~~l~~~~~v~~~~ 171 (222)
. ..-...+++.+ +.++|+|.+++..
T Consensus 114 l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (263)
T 2yqz_A 114 WHLVPDWPKVLAEAIRVLKPGGALLEGW 141 (263)
T ss_dssp GGGCTTHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhcCCHHHHHHHHHHHCCCCcEEEEEe
Confidence 1 11124555555 4478999887764
No 174
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.37 E-value=5.3e-12 Score=103.56 Aligned_cols=117 Identities=16% Similarity=0.130 Sum_probs=84.5
Q ss_pred HHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCC----CcEEEEeCchhchh
Q 043853 53 LYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNI----SNATFVQGDLNKIG 128 (222)
Q Consensus 53 ~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~----~~v~~~~~d~~~~~ 128 (222)
+.+++...+... ++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.|++++...+. .++.+..+|+.+++
T Consensus 45 ~~~~l~~~l~~~--~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~ 122 (293)
T 3thr_A 45 YKAWLLGLLRQH--GCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLD 122 (293)
T ss_dssp HHHHHHHHHHHT--TCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHH
T ss_pred HHHHHHHHhccc--CCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCc
Confidence 334455544333 367999999999999999998888999999999999999998855433 35889999998876
Q ss_pred hhcCCCCCCCcEEEEC-CC---CCC------ccHHHHHHHH-hCCCCcEEEEeeC
Q 043853 129 GDFGNAFPKPDIVISD-PN---RPG------MHMKLIKFLL-KLKAPRIVYVSCN 172 (222)
Q Consensus 129 ~~~~~~~~~fD~ii~~-pp---~~~------~~~~~~~~l~-~l~~~~~v~~~~~ 172 (222)
..+ -..+.||+|++. .. ... ....+++.+. .++|+|.++++..
T Consensus 123 ~~~-~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 123 KDV-PAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp HHS-CCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ccc-ccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 332 123589999996 22 111 1344555554 4799999887764
No 175
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.37 E-value=1.5e-12 Score=103.90 Aligned_cols=101 Identities=10% Similarity=-0.046 Sum_probs=75.0
Q ss_pred CCCeEEEEecccchhHHHHhhcCC-eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVK-HVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDP 145 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~-~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~p 145 (222)
++.+|||+|||+|.++..+++... +++|+|+|+.+++.|+++.+..+ .+++++++|+.+....+. .+.||+|+++.
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~--~~~fD~V~~d~ 136 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT-HKVIPLKGLWEDVAPTLP--DGHFDGILYDT 136 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCS-SEEEEEESCHHHHGGGSC--TTCEEEEEECC
T ss_pred CCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcC-CCeEEEecCHHHhhcccC--CCceEEEEECC
Confidence 478999999999999999987544 89999999999999999988766 469999999988733222 25799999932
Q ss_pred -C----CCC--ccHHHHHHH-HhCCCCcEEEEe
Q 043853 146 -N----RPG--MHMKLIKFL-LKLKAPRIVYVS 170 (222)
Q Consensus 146 -p----~~~--~~~~~~~~l-~~l~~~~~v~~~ 170 (222)
+ ... ....+++.+ +.|+|+|.+++.
T Consensus 137 ~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~ 169 (236)
T 1zx0_A 137 YPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp CCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred cccchhhhhhhhHHHHHHHHHHhcCCCeEEEEE
Confidence 1 111 111334434 448999988754
No 176
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.37 E-value=9.3e-12 Score=99.10 Aligned_cols=108 Identities=16% Similarity=0.221 Sum_probs=80.8
Q ss_pred HHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcC
Q 043853 53 LYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFG 132 (222)
Q Consensus 53 ~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~ 132 (222)
+.+++...+ .++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.++++. ...+++++++|+.+.+.
T Consensus 43 ~~~~l~~~~----~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~--- 112 (242)
T 3l8d_A 43 IIPFFEQYV----KKEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKERG---EGPDLSFIKGDLSSLPF--- 112 (242)
T ss_dssp HHHHHHHHS----CTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHTTT---CBTTEEEEECBTTBCSS---
T ss_pred HHHHHHHHc----CCCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhc---ccCCceEEEcchhcCCC---
Confidence 344454443 24779999999999999999988889999999999999999875 23469999999988653
Q ss_pred CCCCCCcEEEECCCC--CCccHHHHHHHH-hCCCCcEEEEee
Q 043853 133 NAFPKPDIVISDPNR--PGMHMKLIKFLL-KLKAPRIVYVSC 171 (222)
Q Consensus 133 ~~~~~fD~ii~~pp~--~~~~~~~~~~l~-~l~~~~~v~~~~ 171 (222)
+.+.||+|++.... ..-...+++.+. .++|+|.++++.
T Consensus 113 -~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 153 (242)
T 3l8d_A 113 -ENEQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAI 153 (242)
T ss_dssp -CTTCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -CCCCccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEE
Confidence 23589999987541 122235555554 478999988765
No 177
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.37 E-value=2.9e-12 Score=100.71 Aligned_cols=96 Identities=18% Similarity=0.090 Sum_probs=75.9
Q ss_pred CCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPN 146 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp 146 (222)
++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.+++++. .+++++++|+.+++.. +.||+|+++..
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~d~~~~~~~-----~~fD~v~~~~~ 115 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAKEKLP----KEFSITEGDFLSFEVP-----TSIDTIVSTYA 115 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHHHHSC----TTCCEESCCSSSCCCC-----SCCSEEEEESC
T ss_pred CCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCC----CceEEEeCChhhcCCC-----CCeEEEEECcc
Confidence 47899999999999999999888899999999999999998865 4689999999886542 48999999864
Q ss_pred CCCcc--H--HHHHHHH-hCCCCcEEEEee
Q 043853 147 RPGMH--M--KLIKFLL-KLKAPRIVYVSC 171 (222)
Q Consensus 147 ~~~~~--~--~~~~~l~-~l~~~~~v~~~~ 171 (222)
...+. . .+++.+. .++|+|.+++..
T Consensus 116 l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 145 (220)
T 3hnr_A 116 FHHLTDDEKNVAIAKYSQLLNKGGKIVFAD 145 (220)
T ss_dssp GGGSCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred hhcCChHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 22111 1 1455544 489999988774
No 178
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.37 E-value=6.3e-12 Score=100.33 Aligned_cols=128 Identities=14% Similarity=0.106 Sum_probs=89.7
Q ss_pred CCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPN 146 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp 146 (222)
++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.|+++ ++++.+|+.+....+. .+.||+|++.-.
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~d~~~~~~~~~--~~~fD~i~~~~~ 110 (240)
T 3dli_A 41 GCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFCEGK--------FNVVKSDAIEYLKSLP--DKYLDGVMISHF 110 (240)
T ss_dssp TCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHHHTT--------SEEECSCHHHHHHTSC--TTCBSEEEEESC
T ss_pred CCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHHHhh--------cceeeccHHHHhhhcC--CCCeeEEEECCc
Confidence 468999999999999999988888999999999999999876 6899999988643322 258999998653
Q ss_pred C--CC--ccHHHHHHHH-hCCCCcEEEEeeC-ccchH-----------------hhHHHhhccCCCCccCCCeEEeEeee
Q 043853 147 R--PG--MHMKLIKFLL-KLKAPRIVYVSCN-PATCA-----------------RDLDYLCHGVGDQNIKGCYKLKSLQP 203 (222)
Q Consensus 147 ~--~~--~~~~~~~~l~-~l~~~~~v~~~~~-~~~~~-----------------~~~~~l~~~~~~~~~~~~~~~~~~~~ 203 (222)
. -. ....+++.+. .++|+|.++++.. +.... .++..+.+ +.||++.....
T Consensus 111 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-------~aGf~~~~~~~ 183 (240)
T 3dli_A 111 VEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILE-------YLGFRDVKIEF 183 (240)
T ss_dssp GGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHH-------HHTCEEEEEEE
T ss_pred hhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHH-------HCCCeEEEEEE
Confidence 1 11 1245555554 4899998887662 22211 22333332 56888888777
Q ss_pred eccCCCCC
Q 043853 204 VDMFPHTP 211 (222)
Q Consensus 204 ~~~~p~~~ 211 (222)
...++...
T Consensus 184 ~~~~~~~~ 191 (240)
T 3dli_A 184 FEECEELT 191 (240)
T ss_dssp ECCCCTTT
T ss_pred eccCcccc
Confidence 66555433
No 179
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.36 E-value=3.9e-12 Score=110.03 Aligned_cols=113 Identities=17% Similarity=0.162 Sum_probs=77.4
Q ss_pred HHHHhcCCCCCCCeEEEEecccchhHHHHhhc-C-CeEEEEeCCHHHHHHH-------HHHHHHcC--CCcEEEEeCchh
Q 043853 57 IEDCAGLRDDGSEIVLDLFCGTGTIGLTLARW-V-KHVYGYEVVPQAISDA-------CRNAKLNN--ISNATFVQGDLN 125 (222)
Q Consensus 57 i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~-~-~~v~gvD~~~~~i~~a-------~~n~~~~~--~~~v~~~~~d~~ 125 (222)
+.+.+... ++.+|||+|||+|.+++.+|+. + .+++|+|+++.+++.| +++++..| ..+++++++|..
T Consensus 234 ml~~l~l~--~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~ 311 (433)
T 1u2z_A 234 VYQQCQLK--KGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSF 311 (433)
T ss_dssp HHHHTTCC--TTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCS
T ss_pred HHHhcCCC--CCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcc
Confidence 44444433 4789999999999999999874 3 4899999999999999 99999888 567999998654
Q ss_pred chhhhcCCCCCCCcEEEECCCCC--CccHHHHHHHHhCCCCcEEEEee
Q 043853 126 KIGGDFGNAFPKPDIVISDPNRP--GMHMKLIKFLLKLKAPRIVYVSC 171 (222)
Q Consensus 126 ~~~~~~~~~~~~fD~ii~~pp~~--~~~~~~~~~l~~l~~~~~v~~~~ 171 (222)
.....+....+.||+|+++.... .....+.+..+.+++||.+++..
T Consensus 312 ~~~~~~~~~~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~d 359 (433)
T 1u2z_A 312 VDNNRVAELIPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK 359 (433)
T ss_dssp TTCHHHHHHGGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred ccccccccccCCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEee
Confidence 21100000013799999975421 11122223334489999988763
No 180
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.36 E-value=8.7e-13 Score=103.81 Aligned_cols=100 Identities=10% Similarity=0.067 Sum_probs=72.8
Q ss_pred CCCeEEEEecccchhHHHHhhc--CCeEEEEeCCHHHHHHHHH----HHHHcCCCcEEEEeCchhchhhhcCCCCCCCcE
Q 043853 67 GSEIVLDLFCGTGTIGLTLARW--VKHVYGYEVVPQAISDACR----NAKLNNISNATFVQGDLNKIGGDFGNAFPKPDI 140 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~--~~~v~gvD~~~~~i~~a~~----n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ 140 (222)
++.+|||+|||+|.++..+++. ..+++|+|+|+.|++.+.+ +....+.++++++++|+.+++.. .+. |.
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~----~~~-d~ 101 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPL----SGV-GE 101 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSC----CCE-EE
T ss_pred CCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCC----CCC-CE
Confidence 4789999999999999999987 4599999999998886433 33345677899999999886532 123 77
Q ss_pred EEECCCCCCcc-------HHHHHHH-HhCCCCcEEEEee
Q 043853 141 VISDPNRPGMH-------MKLIKFL-LKLKAPRIVYVSC 171 (222)
Q Consensus 141 ii~~pp~~~~~-------~~~~~~l-~~l~~~~~v~~~~ 171 (222)
++...+..... ..+++.+ +.++|+|.++++.
T Consensus 102 v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 102 LHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp EEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEe
Confidence 76655432221 3444544 4479999998865
No 181
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.36 E-value=4e-12 Score=101.25 Aligned_cols=108 Identities=17% Similarity=0.118 Sum_probs=80.7
Q ss_pred HHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcC
Q 043853 53 LYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFG 132 (222)
Q Consensus 53 ~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~ 132 (222)
+.+++...+ .++.+|||+|||+|.++..+++. .+++|+|+|+.+++.|++++...+. +++++++|+.+.+..
T Consensus 23 ~~~~~~~~~----~~~~~vLdiG~G~G~~~~~l~~~-~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~-- 94 (243)
T 3d2l_A 23 WVAWVLEQV----EPGKRIADIGCGTGTATLLLADH-YEVTGVDLSEEMLEIAQEKAMETNR-HVDFWVQDMRELELP-- 94 (243)
T ss_dssp HHHHHHHHS----CTTCEEEEESCTTCHHHHHHTTT-SEEEEEESCHHHHHHHHHHHHHTTC-CCEEEECCGGGCCCS--
T ss_pred HHHHHHHHc----CCCCeEEEecCCCCHHHHHHhhC-CeEEEEECCHHHHHHHHHhhhhcCC-ceEEEEcChhhcCCC--
Confidence 344455544 23579999999999999999887 8999999999999999999987763 699999999876432
Q ss_pred CCCCCCcEEEECC-C--CC---CccHHHHHHH-HhCCCCcEEEEee
Q 043853 133 NAFPKPDIVISDP-N--RP---GMHMKLIKFL-LKLKAPRIVYVSC 171 (222)
Q Consensus 133 ~~~~~fD~ii~~p-p--~~---~~~~~~~~~l-~~l~~~~~v~~~~ 171 (222)
+.||+|++.. . .- .....+++.+ +.++|+|.+++++
T Consensus 95 ---~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 95 ---EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDV 137 (243)
T ss_dssp ---SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 4799999865 2 11 1123344444 3478999988765
No 182
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.36 E-value=2.6e-12 Score=103.60 Aligned_cols=99 Identities=17% Similarity=0.114 Sum_probs=76.6
Q ss_pred CCCeEEEEecccchhHHHHhhc-CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARW-VKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDP 145 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~-~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~p 145 (222)
++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.|++++... ++++++++|+.+.+. +.+.||+|++..
T Consensus 55 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~~----~~~~fD~v~~~~ 128 (266)
T 3ujc_A 55 ENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN--NKIIFEANDILTKEF----PENNFDLIYSRD 128 (266)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC--TTEEEEECCTTTCCC----CTTCEEEEEEES
T ss_pred CCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC--CCeEEEECccccCCC----CCCcEEEEeHHH
Confidence 4789999999999999999886 779999999999999999987654 579999999988643 235899999975
Q ss_pred CCC----CccHHHHHHHH-hCCCCcEEEEee
Q 043853 146 NRP----GMHMKLIKFLL-KLKAPRIVYVSC 171 (222)
Q Consensus 146 p~~----~~~~~~~~~l~-~l~~~~~v~~~~ 171 (222)
... .....+++.+. .++|+|.+++..
T Consensus 129 ~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 129 AILALSLENKNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHhcChHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 311 11234444443 478999988765
No 183
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.36 E-value=4.5e-12 Score=106.44 Aligned_cols=110 Identities=22% Similarity=0.196 Sum_probs=79.4
Q ss_pred HHHHhcCCCCCCCeEEEEecccchhHHHHhhc-C--CeEEEEeCCHHHHHHHHHHHHHcC-----------CCcEEEEeC
Q 043853 57 IEDCAGLRDDGSEIVLDLFCGTGTIGLTLARW-V--KHVYGYEVVPQAISDACRNAKLNN-----------ISNATFVQG 122 (222)
Q Consensus 57 i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~-~--~~v~gvD~~~~~i~~a~~n~~~~~-----------~~~v~~~~~ 122 (222)
+...+... ++.+|||+|||+|.++..+++. + .+++|+|+++.+++.|++|+...+ .+++++..+
T Consensus 97 ~l~~l~~~--~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~ 174 (336)
T 2b25_A 97 ILSMMDIN--PGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHK 174 (336)
T ss_dssp HHHHHTCC--TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEES
T ss_pred HHHhcCCC--CCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEEC
Confidence 44444333 4789999999999999999875 3 699999999999999999998632 246999999
Q ss_pred chhchhhhcCCCCCCCcEEEECCCCCCccHHHHHHH-HhCCCCcEEEEeeCc
Q 043853 123 DLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFL-LKLKAPRIVYVSCNP 173 (222)
Q Consensus 123 d~~~~~~~~~~~~~~fD~ii~~pp~~~~~~~~~~~l-~~l~~~~~v~~~~~~ 173 (222)
|+.+....+. .+.||+|++++|.... +++.+ +.++|+|.+++....
T Consensus 175 d~~~~~~~~~--~~~fD~V~~~~~~~~~---~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 175 DISGATEDIK--SLTFDAVALDMLNPHV---TLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp CTTCCC---------EEEEEECSSSTTT---THHHHGGGEEEEEEEEEEESS
T ss_pred ChHHcccccC--CCCeeEEEECCCCHHH---HHHHHHHhcCCCcEEEEEeCC
Confidence 9987642221 1369999999874422 33433 447899988876644
No 184
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.36 E-value=4.7e-12 Score=104.69 Aligned_cols=103 Identities=19% Similarity=0.158 Sum_probs=78.2
Q ss_pred CCCeEEEEecccchhHHHHhhc--CCeEEEEeCCHHHHHHHHHHHHH--cC--CCcEEEEeCchhchhhhcCCCCCCCcE
Q 043853 67 GSEIVLDLFCGTGTIGLTLARW--VKHVYGYEVVPQAISDACRNAKL--NN--ISNATFVQGDLNKIGGDFGNAFPKPDI 140 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~--~~~v~gvD~~~~~i~~a~~n~~~--~~--~~~v~~~~~d~~~~~~~~~~~~~~fD~ 140 (222)
++.+|||+|||+|.++..+++. ..+++++|+|+.+++.|++++.. .+ .++++++.+|+.++.... .+.||+
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~---~~~fD~ 166 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKF---KNEFDV 166 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGC---SSCEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC---CCCceE
Confidence 3579999999999999999876 35999999999999999999865 22 346999999998865432 247999
Q ss_pred EEECCCCC--C-----ccHHHHHHHHh-CCCCcEEEEeeC
Q 043853 141 VISDPNRP--G-----MHMKLIKFLLK-LKAPRIVYVSCN 172 (222)
Q Consensus 141 ii~~pp~~--~-----~~~~~~~~l~~-l~~~~~v~~~~~ 172 (222)
|++|++.. + ....+.+.+.+ ++|+|++++.+.
T Consensus 167 Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 206 (296)
T 1inl_A 167 IIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE 206 (296)
T ss_dssp EEEEC----------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEcc
Confidence 99998633 1 22556665544 899999887653
No 185
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.36 E-value=6.2e-12 Score=103.09 Aligned_cols=98 Identities=19% Similarity=0.235 Sum_probs=78.2
Q ss_pred CCCeEEEEecccchhHHHHhhc---CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEE
Q 043853 67 GSEIVLDLFCGTGTIGLTLARW---VKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVIS 143 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~---~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~ 143 (222)
++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.|++++...+. +++++++|+.+++.. +.||+|++
T Consensus 22 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~-----~~fD~v~~ 95 (284)
T 3gu3_A 22 KPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY-DSEFLEGDATEIELN-----DKYDIAIC 95 (284)
T ss_dssp SCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS-EEEEEESCTTTCCCS-----SCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcchhhcCcC-----CCeeEEEE
Confidence 4789999999999999999876 46999999999999999999987665 799999999886532 47999999
Q ss_pred CCC---CCCccHHHHHHH-HhCCCCcEEEEee
Q 043853 144 DPN---RPGMHMKLIKFL-LKLKAPRIVYVSC 171 (222)
Q Consensus 144 ~pp---~~~~~~~~~~~l-~~l~~~~~v~~~~ 171 (222)
... ... ...+++.+ +.++|+|.+++..
T Consensus 96 ~~~l~~~~~-~~~~l~~~~~~LkpgG~l~~~~ 126 (284)
T 3gu3_A 96 HAFLLHMTT-PETMLQKMIHSVKKGGKIICFE 126 (284)
T ss_dssp ESCGGGCSS-HHHHHHHHHHTEEEEEEEEEEE
T ss_pred CChhhcCCC-HHHHHHHHHHHcCCCCEEEEEe
Confidence 764 122 24555555 4478999887554
No 186
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.36 E-value=2e-12 Score=113.68 Aligned_cols=114 Identities=20% Similarity=0.273 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcC-CeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEeCchhch
Q 043853 50 AEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWV-KHVYGYEVVPQAISDACRNAKLNNIS-NATFVQGDLNKI 127 (222)
Q Consensus 50 ~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~-~~v~gvD~~~~~i~~a~~n~~~~~~~-~v~~~~~d~~~~ 127 (222)
++.+.+.+...+... ++.+|||+|||+|.+++.+++.+ .+|+|+|+|+ +++.|+++++.++++ +++++++|+.++
T Consensus 143 t~~~~~~il~~l~~~--~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~ 219 (480)
T 3b3j_A 143 TGTYQRAILQNHTDF--KDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEV 219 (480)
T ss_dssp HHHHHHHHHHTGGGT--TTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTC
T ss_pred HHHHHHHHHHhhhhc--CCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhC
Confidence 344444455544322 36899999999999999888764 4999999998 999999999999984 699999999875
Q ss_pred hhhcCCCCCCCcEEEECCCCC-CccHHHHHHH----HhCCCCcEEEEee
Q 043853 128 GGDFGNAFPKPDIVISDPNRP-GMHMKLIKFL----LKLKAPRIVYVSC 171 (222)
Q Consensus 128 ~~~~~~~~~~fD~ii~~pp~~-~~~~~~~~~l----~~l~~~~~v~~~~ 171 (222)
... ++||+|+++++.. .......+.+ +.|+|+|.++++.
T Consensus 220 ~~~-----~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 220 SLP-----EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp CCS-----SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESCE
T ss_pred ccC-----CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 321 4799999998711 1112233332 3478999887443
No 187
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.35 E-value=3.9e-12 Score=99.24 Aligned_cols=101 Identities=11% Similarity=0.045 Sum_probs=76.0
Q ss_pred CCCeEEEEecccchhHHHHhhcCC-eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVK-HVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDP 145 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~-~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~p 145 (222)
++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.|+++... .++++++++|+.++.. +.+.||+|++++
T Consensus 42 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~--~~~i~~~~~d~~~~~~----~~~~fD~v~~~~ 115 (215)
T 2pxx_A 42 PEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH--VPQLRWETMDVRKLDF----PSASFDVVLEKG 115 (215)
T ss_dssp TTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT--CTTCEEEECCTTSCCS----CSSCEEEEEEES
T ss_pred CCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc--CCCcEEEEcchhcCCC----CCCcccEEEECc
Confidence 477999999999999999988765 899999999999999998763 3468999999987632 224799999876
Q ss_pred CCCC-----------------ccHHHHHHHH-hCCCCcEEEEeeCc
Q 043853 146 NRPG-----------------MHMKLIKFLL-KLKAPRIVYVSCNP 173 (222)
Q Consensus 146 p~~~-----------------~~~~~~~~l~-~l~~~~~v~~~~~~ 173 (222)
+... ....+++.+. .++|+|.+++....
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 161 (215)
T 2pxx_A 116 TLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSA 161 (215)
T ss_dssp HHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred chhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCC
Confidence 4211 1134444443 37899988766643
No 188
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.35 E-value=2.2e-12 Score=106.59 Aligned_cols=102 Identities=17% Similarity=0.093 Sum_probs=76.6
Q ss_pred CCCeEEEEecccchhHHHHhhc--CCeEEEEeCCHHHHHHHHHHHHHc-----CCCcEEEEeCchhchhhhcCCCCCCCc
Q 043853 67 GSEIVLDLFCGTGTIGLTLARW--VKHVYGYEVVPQAISDACRNAKLN-----NISNATFVQGDLNKIGGDFGNAFPKPD 139 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~--~~~v~gvD~~~~~i~~a~~n~~~~-----~~~~v~~~~~d~~~~~~~~~~~~~~fD 139 (222)
+..+|||+|||+|.++..+++. ..+|+++|+|+.+++.|++++... ..++++++.+|+.++... ..+.||
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~---~~~~fD 159 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ---TSQTFD 159 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---C---CCCCEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhh---cCCCcc
Confidence 4679999999999999998876 358999999999999999998764 234699999999887543 235899
Q ss_pred EEEECCCCCC------ccHHHHHHHHh-CCCCcEEEEee
Q 043853 140 IVISDPNRPG------MHMKLIKFLLK-LKAPRIVYVSC 171 (222)
Q Consensus 140 ~ii~~pp~~~------~~~~~~~~l~~-l~~~~~v~~~~ 171 (222)
+|++|++... ...++.+.+.+ |+|+|++.+.+
T Consensus 160 vIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 160 VIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EEEECC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 9999876321 12456665544 79999988765
No 189
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.34 E-value=9.9e-12 Score=103.14 Aligned_cols=102 Identities=17% Similarity=0.126 Sum_probs=77.7
Q ss_pred CCCeEEEEecccchhHHHHhhcC--CeEEEEeCCHHHHHHHHHHHHH--cCC--CcEEEEeCchhchhhhcCCCCCCCcE
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWV--KHVYGYEVVPQAISDACRNAKL--NNI--SNATFVQGDLNKIGGDFGNAFPKPDI 140 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~--~~v~gvD~~~~~i~~a~~n~~~--~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~ 140 (222)
+..+|||+|||+|.++..+++.. .+++++|+|+.+++.|++++.. .++ ++++++.+|+.++.... .+.||+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~---~~~fD~ 171 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQN---QDAFDV 171 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTC---SSCEEE
T ss_pred CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhC---CCCceE
Confidence 46799999999999999998764 5999999999999999999875 233 46999999998865432 257999
Q ss_pred EEECCCCCC------ccHHHHHHH-HhCCCCcEEEEee
Q 043853 141 VISDPNRPG------MHMKLIKFL-LKLKAPRIVYVSC 171 (222)
Q Consensus 141 ii~~pp~~~------~~~~~~~~l-~~l~~~~~v~~~~ 171 (222)
|++|++... ....+.+.+ +.|+|+|++++..
T Consensus 172 Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 172 IITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 999987421 113445544 4489999988765
No 190
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.33 E-value=1e-11 Score=102.38 Aligned_cols=114 Identities=17% Similarity=0.190 Sum_probs=83.7
Q ss_pred HHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhh---cCCeEEEEeCCHHHHHHHHHHHHHc--CCCcEEEEeCchhc
Q 043853 52 VLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLAR---WVKHVYGYEVVPQAISDACRNAKLN--NISNATFVQGDLNK 126 (222)
Q Consensus 52 ~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~---~~~~v~gvD~~~~~i~~a~~n~~~~--~~~~v~~~~~d~~~ 126 (222)
.+.+.+..... .++.+|||+|||+|.++..+++ .+.+++|+|+|+.+++.|+++++.. ..++++++++|+.+
T Consensus 24 ~~~~~l~~~~~---~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 100 (299)
T 3g5t_A 24 DFYKMIDEYHD---GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDD 100 (299)
T ss_dssp HHHHHHHHHCC---SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTC
T ss_pred HHHHHHHHHhc---CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHh
Confidence 34455555432 3478999999999999999994 4669999999999999999999886 23569999999988
Q ss_pred hhhhc--CCCCCCCcEEEECCC--CCCccHHHHHHHHh-CCCCcEEEE
Q 043853 127 IGGDF--GNAFPKPDIVISDPN--RPGMHMKLIKFLLK-LKAPRIVYV 169 (222)
Q Consensus 127 ~~~~~--~~~~~~fD~ii~~pp--~~~~~~~~~~~l~~-l~~~~~v~~ 169 (222)
+.... ....+.||+|++... .. -...+++.+.+ ++|+|.+++
T Consensus 101 ~~~~~~~~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 101 FKFLGADSVDKQKIDMITAVECAHWF-DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp CGGGCTTTTTSSCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEE
T ss_pred CCccccccccCCCeeEEeHhhHHHHh-CHHHHHHHHHHhcCCCcEEEE
Confidence 76431 001147999999764 22 23455555544 789999876
No 191
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.33 E-value=8.5e-12 Score=102.40 Aligned_cols=100 Identities=18% Similarity=0.165 Sum_probs=78.0
Q ss_pred CCCeEEEEecccchhHHHHhhc-CCeEEEEeCCHHHHHHHHHHHHHc--C---------CCcEEEEeCchhchhhhcCCC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARW-VKHVYGYEVVPQAISDACRNAKLN--N---------ISNATFVQGDLNKIGGDFGNA 134 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~-~~~v~gvD~~~~~i~~a~~n~~~~--~---------~~~v~~~~~d~~~~~~~~~~~ 134 (222)
++.+|||+|||+|.++..+++. ..+++++|+|+.+++.|++++ .. + .++++++.+|+.++...
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~---- 149 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN---- 149 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH----
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc----
Confidence 3679999999999999998876 349999999999999999998 33 2 34699999999887543
Q ss_pred CCCCcEEEECCCCC-----Cc-cHHHHHHHHh-CCCCcEEEEee
Q 043853 135 FPKPDIVISDPNRP-----GM-HMKLIKFLLK-LKAPRIVYVSC 171 (222)
Q Consensus 135 ~~~fD~ii~~pp~~-----~~-~~~~~~~l~~-l~~~~~v~~~~ 171 (222)
.+.||+|++|+|.. .+ ...+.+.+.+ ++|+|++++.+
T Consensus 150 ~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 150 NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 24799999998732 11 3555665544 79999988764
No 192
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.32 E-value=7.5e-12 Score=102.13 Aligned_cols=98 Identities=12% Similarity=-0.026 Sum_probs=75.5
Q ss_pred HHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCC
Q 043853 54 YKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGN 133 (222)
Q Consensus 54 ~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~ 133 (222)
.+.+.+.+...+ + +|||+|||+|.++..+++.+.+|+|+|+|+.+++.+++++.. .+++++++|+.++.....
T Consensus 36 ~~~Iv~~~~~~~--~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~~---~~v~vi~~D~l~~~~~~~- 108 (271)
T 3fut_A 36 LRRIVEAARPFT--G-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLSG---LPVRLVFQDALLYPWEEV- 108 (271)
T ss_dssp HHHHHHHHCCCC--S-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTTT---SSEEEEESCGGGSCGGGS-
T ss_pred HHHHHHhcCCCC--C-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCC---CCEEEEECChhhCChhhc-
Confidence 334455554433 6 999999999999999999888999999999999999998762 469999999988754311
Q ss_pred CCCCCcEEEECCCCCCccHHHHHHHHh
Q 043853 134 AFPKPDIVISDPNRPGMHMKLIKFLLK 160 (222)
Q Consensus 134 ~~~~fD~ii~~pp~~~~~~~~~~~l~~ 160 (222)
..+|.|++|+|+.-..+-+...+..
T Consensus 109 --~~~~~iv~NlPy~iss~il~~ll~~ 133 (271)
T 3fut_A 109 --PQGSLLVANLPYHIATPLVTRLLKT 133 (271)
T ss_dssp --CTTEEEEEEECSSCCHHHHHHHHHH
T ss_pred --cCccEEEecCcccccHHHHHHHhcC
Confidence 2589999999976554444444444
No 193
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.32 E-value=4.5e-11 Score=96.10 Aligned_cols=97 Identities=11% Similarity=0.052 Sum_probs=72.3
Q ss_pred HHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcC
Q 043853 53 LYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFG 132 (222)
Q Consensus 53 ~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~ 132 (222)
+.+.+.+.+... ++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.+++++.. .++++++++|+.++...
T Consensus 18 ~~~~i~~~~~~~--~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~~~~~--~~~v~~~~~D~~~~~~~-- 91 (244)
T 1qam_A 18 NIDKIMTNIRLN--EHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLVD--HDNFQVLNKDILQFKFP-- 91 (244)
T ss_dssp HHHHHHTTCCCC--TTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTTT--CCSEEEECCCGGGCCCC--
T ss_pred HHHHHHHhCCCC--CCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHHhhcc--CCCeEEEEChHHhCCcc--
Confidence 344454544332 478999999999999999998889999999999999999998864 34799999999887542
Q ss_pred CCCCCCcEEEECCCCCCccHHHHHHH
Q 043853 133 NAFPKPDIVISDPNRPGMHMKLIKFL 158 (222)
Q Consensus 133 ~~~~~fD~ii~~pp~~~~~~~~~~~l 158 (222)
....| .|++|+|+... ..++..+
T Consensus 92 -~~~~~-~vv~nlPy~~~-~~~l~~~ 114 (244)
T 1qam_A 92 -KNQSY-KIFGNIPYNIS-TDIIRKI 114 (244)
T ss_dssp -SSCCC-EEEEECCGGGH-HHHHHHH
T ss_pred -cCCCe-EEEEeCCcccC-HHHHHHH
Confidence 11245 78999997543 3343333
No 194
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.32 E-value=1.1e-11 Score=101.52 Aligned_cols=103 Identities=15% Similarity=0.064 Sum_probs=79.8
Q ss_pred CCCeEEEEecccchhHHHHhhc--CCeEEEEeCCHHHHHHHHHHHHHc--CC--CcEEEEeCchhchhhhcCCCCCCCcE
Q 043853 67 GSEIVLDLFCGTGTIGLTLARW--VKHVYGYEVVPQAISDACRNAKLN--NI--SNATFVQGDLNKIGGDFGNAFPKPDI 140 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~--~~~v~gvD~~~~~i~~a~~n~~~~--~~--~~v~~~~~d~~~~~~~~~~~~~~fD~ 140 (222)
+..+|||+|||+|.++..+++. ..+++++|+|+.+++.|++++... +. ++++++.+|+.++.... .++||+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~---~~~fD~ 151 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKS---ENQYDV 151 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTC---CSCEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC---CCCeeE
Confidence 4679999999999999998876 359999999999999999998642 23 46999999998875432 257999
Q ss_pred EEECCCCCC------ccHHHHHHH-HhCCCCcEEEEeeC
Q 043853 141 VISDPNRPG------MHMKLIKFL-LKLKAPRIVYVSCN 172 (222)
Q Consensus 141 ii~~pp~~~------~~~~~~~~l-~~l~~~~~v~~~~~ 172 (222)
|++|++... ...++.+.+ +.|+|+|++++.+.
T Consensus 152 Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~ 190 (275)
T 1iy9_A 152 IMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTD 190 (275)
T ss_dssp EEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECC
T ss_pred EEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 999987421 124555555 44899999987753
No 195
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.32 E-value=2.7e-12 Score=106.30 Aligned_cols=101 Identities=20% Similarity=0.155 Sum_probs=79.3
Q ss_pred CCCCeEEEEecccchhHHHHh-hc--CCeEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhhhcCCCCCCCcEE
Q 043853 66 DGSEIVLDLFCGTGTIGLTLA-RW--VKHVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGDFGNAFPKPDIV 141 (222)
Q Consensus 66 ~~~~~vlDlg~G~G~~~~~la-~~--~~~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~~~~~~~fD~i 141 (222)
.++.+|||+|||+|.++..++ .. ..+++|+|+|+.+++.|++++...++.+ ++++++|+.+.+.. +.||+|
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-----~~fD~v 191 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-----EGYDLL 191 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-----SCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-----CCeEEE
Confidence 357899999999999999885 22 4599999999999999999999888865 99999999886542 489999
Q ss_pred EECCCCC---CccH--HHHHHHH-hCCCCcEEEEee
Q 043853 142 ISDPNRP---GMHM--KLIKFLL-KLKAPRIVYVSC 171 (222)
Q Consensus 142 i~~pp~~---~~~~--~~~~~l~-~l~~~~~v~~~~ 171 (222)
+++.+.. +... .+++.+. .++|+|.+++++
T Consensus 192 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 192 TSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp ECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 9987521 2111 2445444 489999998776
No 196
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.32 E-value=1.8e-11 Score=99.48 Aligned_cols=112 Identities=20% Similarity=0.199 Sum_probs=79.5
Q ss_pred HHHHHhcCCCCCCCeEEEEecccchhHHHHhhcC---CeEEEEeCCHH------HHHHHHHHHHHcCCC-cEEEEeCc-h
Q 043853 56 LIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWV---KHVYGYEVVPQ------AISDACRNAKLNNIS-NATFVQGD-L 124 (222)
Q Consensus 56 ~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~---~~v~gvD~~~~------~i~~a~~n~~~~~~~-~v~~~~~d-~ 124 (222)
.+.+.+... ++.+|||+|||+|.++..+++.. .+++|+|+|+. +++.|+++++..+++ +++++.+| .
T Consensus 34 ~l~~~~~~~--~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 111 (275)
T 3bkx_A 34 AIAEAWQVK--PGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNL 111 (275)
T ss_dssp HHHHHHTCC--TTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCT
T ss_pred HHHHHcCCC--CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChh
Confidence 344444333 47899999999999999998763 69999999997 999999999988874 69999998 3
Q ss_pred hchhhhcCCCCCCCcEEEECCCC--CCccHHHHHHHHhCC-CCcEEEEee
Q 043853 125 NKIGGDFGNAFPKPDIVISDPNR--PGMHMKLIKFLLKLK-APRIVYVSC 171 (222)
Q Consensus 125 ~~~~~~~~~~~~~fD~ii~~pp~--~~~~~~~~~~l~~l~-~~~~v~~~~ 171 (222)
......+ +.+.||+|++.... ......+.+.++.+. ++|.+++..
T Consensus 112 ~~~~~~~--~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 112 SDDLGPI--ADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAE 159 (275)
T ss_dssp TTCCGGG--TTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEE
T ss_pred hhccCCC--CCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence 2211111 22579999997641 111234666666654 488887654
No 197
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.32 E-value=8.4e-13 Score=104.99 Aligned_cols=100 Identities=14% Similarity=0.070 Sum_probs=76.2
Q ss_pred CCCeEEEEecccchhHHHHhhc--CCeEEEEeCC-HHHHHHH---HHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcE
Q 043853 67 GSEIVLDLFCGTGTIGLTLARW--VKHVYGYEVV-PQAISDA---CRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDI 140 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~--~~~v~gvD~~-~~~i~~a---~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ 140 (222)
++.+|||+|||+|.++..+++. ..+|+|+|+| +.|++.| ++++...+++++++.++|+.+++.... +.+|.
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~---d~v~~ 100 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELK---NIADS 100 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGT---TCEEE
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhcc---CeEEE
Confidence 4789999999999999999853 4589999999 6666666 888888888889999999988854321 46788
Q ss_pred EEECCCCCCc-------cHHHHHHHHh-CCCCcEEEE
Q 043853 141 VISDPNRPGM-------HMKLIKFLLK-LKAPRIVYV 169 (222)
Q Consensus 141 ii~~pp~~~~-------~~~~~~~l~~-l~~~~~v~~ 169 (222)
+.+++|.... ...++..+.+ ++|+|.+++
T Consensus 101 i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 101 ISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp EEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred EEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 8888764321 1334555544 799999887
No 198
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.32 E-value=2.7e-11 Score=101.23 Aligned_cols=102 Identities=19% Similarity=0.199 Sum_probs=79.1
Q ss_pred CCCeEEEEecccchhHHHHhhc--CCeEEEEeCCHHHHHHHHHHHHH--cCC--CcEEEEeCchhchhhhcCCCCCCCcE
Q 043853 67 GSEIVLDLFCGTGTIGLTLARW--VKHVYGYEVVPQAISDACRNAKL--NNI--SNATFVQGDLNKIGGDFGNAFPKPDI 140 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~--~~~v~gvD~~~~~i~~a~~n~~~--~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~ 140 (222)
++.+|||+|||+|.++..+++. ..+++++|+|+.+++.|++++.. ++. ++++++.+|+.++.... .+.||+
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~---~~~fDv 192 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV---TNTYDV 192 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC---CSCEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhc---CCCceE
Confidence 3579999999999999999876 45999999999999999999875 222 46999999998865432 247999
Q ss_pred EEECCCCC-----Cc-cHHHHHHHHh-CCCCcEEEEee
Q 043853 141 VISDPNRP-----GM-HMKLIKFLLK-LKAPRIVYVSC 171 (222)
Q Consensus 141 ii~~pp~~-----~~-~~~~~~~l~~-l~~~~~v~~~~ 171 (222)
|++|++.. .+ ...+.+.+.+ ++|+|++++..
T Consensus 193 Ii~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 193 IIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp EEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 99998521 11 1566666544 79999988765
No 199
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.32 E-value=4.5e-12 Score=102.49 Aligned_cols=95 Identities=20% Similarity=0.155 Sum_probs=74.8
Q ss_pred CCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECC-
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDP- 145 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~p- 145 (222)
++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.|+++.. +++++++|+.+++. .+.||+|++..
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~-----~~~~~~~d~~~~~~-----~~~fD~v~~~~~ 119 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARRRNP-----DAVLHHGDMRDFSL-----GRRFSAVTCMFS 119 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHHHCT-----TSEEEECCTTTCCC-----SCCEEEEEECTT
T ss_pred CCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhCC-----CCEEEECChHHCCc-----cCCcCEEEEcCc
Confidence 46799999999999999999888899999999999999998753 68999999988654 25899999975
Q ss_pred CCCC-----ccHHHHHHHH-hCCCCcEEEEee
Q 043853 146 NRPG-----MHMKLIKFLL-KLKAPRIVYVSC 171 (222)
Q Consensus 146 p~~~-----~~~~~~~~l~-~l~~~~~v~~~~ 171 (222)
...- ....+++.+. .++|+|.++++.
T Consensus 120 ~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 120 SIGHLAGQAELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp GGGGSCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 3111 1223444443 378999999864
No 200
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.31 E-value=8.4e-12 Score=95.96 Aligned_cols=103 Identities=14% Similarity=0.053 Sum_probs=73.6
Q ss_pred HHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhc--CCeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEeCchhchh
Q 043853 52 VLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARW--VKHVYGYEVVPQAISDACRNAKLNNIS-NATFVQGDLNKIG 128 (222)
Q Consensus 52 ~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~--~~~v~gvD~~~~~i~~a~~n~~~~~~~-~v~~~~~d~~~~~ 128 (222)
.++..+...+ ++..+|||+|||+|.+++.++.. ..+++|+|+|+.|++.+++|+..+|+. ++++ .|..+..
T Consensus 38 ~fY~~~~~~l----~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~ 111 (200)
T 3fzg_A 38 DFYTYVFGNI----KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDV 111 (200)
T ss_dssp HHHHHHHHHS----CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHH
T ss_pred HHHHHHHhhc----CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccC
Confidence 3444455544 23679999999999999999665 339999999999999999999999997 4776 5554432
Q ss_pred hhcCCCCCCCcEEEECCC------CCCccHHHHHHHHhCCCCcEEE
Q 043853 129 GDFGNAFPKPDIVISDPN------RPGMHMKLIKFLLKLKAPRIVY 168 (222)
Q Consensus 129 ~~~~~~~~~fD~ii~~pp------~~~~~~~~~~~l~~l~~~~~v~ 168 (222)
. ...||+|++.-- +.+. ..+.+..++++++++
T Consensus 112 ~-----~~~~DvVLa~k~LHlL~~~~~a---l~~v~~~L~pggvfI 149 (200)
T 3fzg_A 112 Y-----KGTYDVVFLLKMLPVLKQQDVN---ILDFLQLFHTQNFVI 149 (200)
T ss_dssp T-----TSEEEEEEEETCHHHHHHTTCC---HHHHHHTCEEEEEEE
T ss_pred C-----CCCcChhhHhhHHHhhhhhHHH---HHHHHHHhCCCCEEE
Confidence 2 247999988642 2222 224455578887665
No 201
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.30 E-value=1.4e-11 Score=95.94 Aligned_cols=100 Identities=19% Similarity=0.106 Sum_probs=74.5
Q ss_pred CCCeEEEEecccchhHH-HHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECC
Q 043853 67 GSEIVLDLFCGTGTIGL-TLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDP 145 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~-~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~p 145 (222)
++.+|||+|||+|.++. .+++.+.+++|+|+|+.+++.|++++...+. +++++++|+.+.+. +.+.||+|++..
T Consensus 23 ~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~----~~~~fD~v~~~~ 97 (209)
T 2p8j_A 23 LDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNF-KLNISKGDIRKLPF----KDESMSFVYSYG 97 (209)
T ss_dssp SCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTC-CCCEEECCTTSCCS----CTTCEEEEEECS
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEECchhhCCC----CCCceeEEEEcC
Confidence 36899999999999855 4455667999999999999999999987763 68999999987642 224799999875
Q ss_pred CCCC----ccHHHHHHH-HhCCCCcEEEEee
Q 043853 146 NRPG----MHMKLIKFL-LKLKAPRIVYVSC 171 (222)
Q Consensus 146 p~~~----~~~~~~~~l-~~l~~~~~v~~~~ 171 (222)
.... ....+++.+ +.++|+|.++++.
T Consensus 98 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 98 TIFHMRKNDVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hHHhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 3111 123444444 3378999988765
No 202
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.30 E-value=2.1e-12 Score=106.51 Aligned_cols=106 Identities=21% Similarity=0.255 Sum_probs=74.7
Q ss_pred CCCeEEEEecccchhHHHHhhc--CCeEEEEeCCHHHHHHHHHHHHHcCC------------------------------
Q 043853 67 GSEIVLDLFCGTGTIGLTLARW--VKHVYGYEVVPQAISDACRNAKLNNI------------------------------ 114 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~--~~~v~gvD~~~~~i~~a~~n~~~~~~------------------------------ 114 (222)
++.+|||+|||+|.+++.+++. ..+++|+|+|+.+++.|+++++..+.
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 4789999999999999999986 45999999999999999999776542
Q ss_pred ----------------------------CcEEEEeCchhchhhhc-CCCCCCCcEEEECCCCCC--------ccHHHHHH
Q 043853 115 ----------------------------SNATFVQGDLNKIGGDF-GNAFPKPDIVISDPNRPG--------MHMKLIKF 157 (222)
Q Consensus 115 ----------------------------~~v~~~~~d~~~~~~~~-~~~~~~fD~ii~~pp~~~--------~~~~~~~~ 157 (222)
.++++.++|+......+ ....+.||+|++...... ....+++.
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 26999999987543211 112358999999754100 11233443
Q ss_pred H-HhCCCCcEEEEeeC
Q 043853 158 L-LKLKAPRIVYVSCN 172 (222)
Q Consensus 158 l-~~l~~~~~v~~~~~ 172 (222)
+ +.|+|+|.+++...
T Consensus 206 ~~~~LkpGG~lil~~~ 221 (292)
T 3g07_A 206 IYRHLRPGGILVLEPQ 221 (292)
T ss_dssp HHHHEEEEEEEEEECC
T ss_pred HHHHhCCCcEEEEecC
Confidence 3 34899999998753
No 203
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.30 E-value=7.8e-12 Score=101.46 Aligned_cols=115 Identities=10% Similarity=0.011 Sum_probs=75.1
Q ss_pred HHHHhcCCCCCCCeEEEEecccchhHHHHhhcC-CeEEEEeCCHHHHHHHHHHHHHcC--C-------------------
Q 043853 57 IEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWV-KHVYGYEVVPQAISDACRNAKLNN--I------------------- 114 (222)
Q Consensus 57 i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~-~~v~gvD~~~~~i~~a~~n~~~~~--~------------------- 114 (222)
+.+++.....++.+|||+|||+|.++..++..+ .+|+|+|+|+.|++.|+++++.+. +
T Consensus 45 ~~~~~~~~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~ 124 (263)
T 2a14_A 45 LHKTFGPGGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRW 124 (263)
T ss_dssp HHHHHSTTSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGH
T ss_pred HHHHhcCCCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcch
Confidence 333333233457899999999998888766554 479999999999999999876542 0
Q ss_pred --------CcEE-EEeCchhchhhhcCCCCCCCcEEEECCC------CCCccHHHHHHHHh-CCCCcEEEEee
Q 043853 115 --------SNAT-FVQGDLNKIGGDFGNAFPKPDIVISDPN------RPGMHMKLIKFLLK-LKAPRIVYVSC 171 (222)
Q Consensus 115 --------~~v~-~~~~d~~~~~~~~~~~~~~fD~ii~~pp------~~~~~~~~~~~l~~-l~~~~~v~~~~ 171 (222)
.+++ ++++|+.+.........+.||+|++.-- ...-...++..+.+ |+|||.++++.
T Consensus 125 ~~~~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 125 EEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTV 197 (263)
T ss_dssp HHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhHHHHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 1243 8899998742110001247999999632 11111234444434 89999988775
No 204
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.30 E-value=1.2e-11 Score=103.12 Aligned_cols=102 Identities=16% Similarity=0.111 Sum_probs=80.1
Q ss_pred CCCeEEEEecccchhHHHHhhc--CCeEEEEeCCHHHHHHHHHHHHH--cC---CCcEEEEeCchhchhhhcCCCCCCCc
Q 043853 67 GSEIVLDLFCGTGTIGLTLARW--VKHVYGYEVVPQAISDACRNAKL--NN---ISNATFVQGDLNKIGGDFGNAFPKPD 139 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~--~~~v~gvD~~~~~i~~a~~n~~~--~~---~~~v~~~~~d~~~~~~~~~~~~~~fD 139 (222)
+..+|||+|||+|.++..+++. ..+++++|+|+.+++.|++++.. .+ .++++++.+|+.++.... .+.||
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~---~~~fD 153 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERT---EERYD 153 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHC---CCCEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhc---CCCcc
Confidence 3579999999999999999876 45999999999999999999865 22 356999999998865432 25799
Q ss_pred EEEECCCCCC---c------cHHHHHHHHh-CCCCcEEEEee
Q 043853 140 IVISDPNRPG---M------HMKLIKFLLK-LKAPRIVYVSC 171 (222)
Q Consensus 140 ~ii~~pp~~~---~------~~~~~~~l~~-l~~~~~v~~~~ 171 (222)
+|+++++... - ...+.+.+.+ |+|+|++++.+
T Consensus 154 ~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 154 VVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 9999987432 1 3566666654 78999988765
No 205
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.30 E-value=1.7e-11 Score=95.90 Aligned_cols=96 Identities=20% Similarity=0.114 Sum_probs=74.6
Q ss_pred CCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPN 146 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp 146 (222)
++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.|++ .+.++++++++|+.++. ..+.||+|+++..
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~----~~~~~~~~~~~d~~~~~-----~~~~~D~v~~~~~ 116 (218)
T 3ou2_A 46 IRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGR----HGLDNVEFRQQDLFDWT-----PDRQWDAVFFAHW 116 (218)
T ss_dssp SCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGG----GCCTTEEEEECCTTSCC-----CSSCEEEEEEESC
T ss_pred CCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHh----cCCCCeEEEecccccCC-----CCCceeEEEEech
Confidence 36799999999999999999888899999999999999988 55667999999998762 2358999999753
Q ss_pred CCCcc----HHHHHHHH-hCCCCcEEEEee
Q 043853 147 RPGMH----MKLIKFLL-KLKAPRIVYVSC 171 (222)
Q Consensus 147 ~~~~~----~~~~~~l~-~l~~~~~v~~~~ 171 (222)
...+. ..+++.+. .++|+|.+++..
T Consensus 117 l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 146 (218)
T 3ou2_A 117 LAHVPDDRFEAFWESVRSAVAPGGVVEFVD 146 (218)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 11111 34444443 478988887664
No 206
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.30 E-value=1.8e-11 Score=97.86 Aligned_cols=102 Identities=17% Similarity=0.089 Sum_probs=75.3
Q ss_pred CCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCC-CCCCCcEEEECC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGN-AFPKPDIVISDP 145 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~-~~~~fD~ii~~p 145 (222)
++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.|+++.. ..+++++++|+.+......- ....||+|+++.
T Consensus 56 ~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~ 132 (245)
T 3ggd_A 56 PELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKENT---AANISYRLLDGLVPEQAAQIHSEIGDANIYMRT 132 (245)
T ss_dssp TTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHSC---CTTEEEEECCTTCHHHHHHHHHHHCSCEEEEES
T ss_pred CCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhCc---ccCceEEECcccccccccccccccCccEEEEcc
Confidence 47799999999999999999888899999999999999999872 33699999999886542100 002489999875
Q ss_pred CCC--C--ccHHHHHHHH-hCCCCcEEEEee
Q 043853 146 NRP--G--MHMKLIKFLL-KLKAPRIVYVSC 171 (222)
Q Consensus 146 p~~--~--~~~~~~~~l~-~l~~~~~v~~~~ 171 (222)
... . ....+++.+. .++|+|.+++..
T Consensus 133 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 133 GFHHIPVEKRELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp SSTTSCGGGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred hhhcCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 311 1 2245555554 479999866554
No 207
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.29 E-value=2.9e-11 Score=100.32 Aligned_cols=104 Identities=21% Similarity=0.145 Sum_probs=78.2
Q ss_pred CCCeEEEEecccchhHHHHhhc--CCeEEEEeCCHHHHHHHHHHHHHc----CCCcEEEEeCchhchhhhcCCCCCCCcE
Q 043853 67 GSEIVLDLFCGTGTIGLTLARW--VKHVYGYEVVPQAISDACRNAKLN----NISNATFVQGDLNKIGGDFGNAFPKPDI 140 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~--~~~v~gvD~~~~~i~~a~~n~~~~----~~~~v~~~~~d~~~~~~~~~~~~~~fD~ 140 (222)
++.+|||+|||+|.++..+++. ..+++++|+|+.+++.|++++... ..++++++.+|+.++.... ..+.||+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~--~~~~fDv 172 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQT--PDNTYDV 172 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSS--CTTCEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhc--cCCceeE
Confidence 4679999999999999999876 359999999999999999987431 2346999999998876431 1257999
Q ss_pred EEECCCCCC-----c-cHHHHHHHHh-CCCCcEEEEeeC
Q 043853 141 VISDPNRPG-----M-HMKLIKFLLK-LKAPRIVYVSCN 172 (222)
Q Consensus 141 ii~~pp~~~-----~-~~~~~~~l~~-l~~~~~v~~~~~ 172 (222)
|++|++... + ...+++.+.+ |+|+|++++.+.
T Consensus 173 Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 211 (304)
T 3bwc_A 173 VIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGE 211 (304)
T ss_dssp EEEECC---------CCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 999986321 1 1455665544 899999887654
No 208
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.29 E-value=1.5e-11 Score=97.86 Aligned_cols=98 Identities=18% Similarity=0.154 Sum_probs=75.6
Q ss_pred CCCeEEEEecccchhHHHHhhcCC-eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVK-HVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDP 145 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~-~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~p 145 (222)
++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.|+++... .+++++++|+.+.+. +.+.||+|++..
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~---~~~~~~~~d~~~~~~----~~~~fD~v~~~~ 115 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD---TGITYERADLDKLHL----PQDSFDLAYSSL 115 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS---SSEEEEECCGGGCCC----CTTCEEEEEEES
T ss_pred CCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc---CCceEEEcChhhccC----CCCCceEEEEec
Confidence 478999999999999999988776 999999999999999987643 358999999987642 225799999876
Q ss_pred CC--CCccHHHHHHHH-hCCCCcEEEEee
Q 043853 146 NR--PGMHMKLIKFLL-KLKAPRIVYVSC 171 (222)
Q Consensus 146 p~--~~~~~~~~~~l~-~l~~~~~v~~~~ 171 (222)
.. ......+++.+. .++|+|.++++.
T Consensus 116 ~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 116 ALHYVEDVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp CGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccccchHHHHHHHHHHhcCcCcEEEEEe
Confidence 41 112345555554 478999988765
No 209
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.28 E-value=3.8e-11 Score=96.69 Aligned_cols=106 Identities=14% Similarity=0.043 Sum_probs=76.0
Q ss_pred CCCCeEEEEecccchhHHHHhhcCC-eEEEEeCCHHHHHHHHHHHHHcCC-----------------------------C
Q 043853 66 DGSEIVLDLFCGTGTIGLTLARWVK-HVYGYEVVPQAISDACRNAKLNNI-----------------------------S 115 (222)
Q Consensus 66 ~~~~~vlDlg~G~G~~~~~la~~~~-~v~gvD~~~~~i~~a~~n~~~~~~-----------------------------~ 115 (222)
.++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.|++++...+. .
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 3568999999999999998888776 999999999999999998865431 1
Q ss_pred cE-EEEeCchhchhhhcCCCCCCCcEEEECCCCC----C--ccHHHHHHHHh-CCCCcEEEEee
Q 043853 116 NA-TFVQGDLNKIGGDFGNAFPKPDIVISDPNRP----G--MHMKLIKFLLK-LKAPRIVYVSC 171 (222)
Q Consensus 116 ~v-~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~----~--~~~~~~~~l~~-l~~~~~v~~~~ 171 (222)
++ ++.++|+.+.........+.||+|++..... . ....++..+.+ ++|+|.+++..
T Consensus 135 ~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 198 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVD 198 (265)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEe
Confidence 27 8999999876431111124799999865311 1 22344444443 78999988765
No 210
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.28 E-value=7.8e-12 Score=103.52 Aligned_cols=81 Identities=15% Similarity=0.149 Sum_probs=67.2
Q ss_pred CCCeEEEEecccchhHHHHhhcC--CeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCC-CCCCCcEEEE
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWV--KHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGN-AFPKPDIVIS 143 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~--~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~-~~~~fD~ii~ 143 (222)
++.+|||+|||+|+++..+++.. .+++|+|+|+.+++.|++|++.++ ++++++++|+.++...+.. ....||.|++
T Consensus 26 ~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g-~~v~~v~~d~~~l~~~l~~~g~~~~D~Vl~ 104 (301)
T 1m6y_A 26 DEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS-DRVSLFKVSYREADFLLKTLGIEKVDGILM 104 (301)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT-TTEEEEECCGGGHHHHHHHTTCSCEEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEECCHHHHHHHHHhcCCCCCCEEEE
Confidence 47899999999999999998763 699999999999999999998887 6799999999887532211 1137999999
Q ss_pred CCCCC
Q 043853 144 DPNRP 148 (222)
Q Consensus 144 ~pp~~ 148 (222)
|||..
T Consensus 105 D~gvS 109 (301)
T 1m6y_A 105 DLGVS 109 (301)
T ss_dssp ECSCC
T ss_pred cCccc
Confidence 99854
No 211
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.28 E-value=1.2e-11 Score=100.20 Aligned_cols=106 Identities=18% Similarity=0.132 Sum_probs=77.4
Q ss_pred HHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcC
Q 043853 53 LYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFG 132 (222)
Q Consensus 53 ~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~ 132 (222)
+.+.+.+.+... ++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.|+++. +++++++|+.+++.
T Consensus 22 ~~~~l~~~~~~~--~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~d~~~~~~--- 90 (261)
T 3ege_A 22 IVNAIINLLNLP--KGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAVVHP------QVEWFTGYAENLAL--- 90 (261)
T ss_dssp HHHHHHHHHCCC--TTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSCCCT------TEEEECCCTTSCCS---
T ss_pred HHHHHHHHhCCC--CCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHHHhcc------CCEEEECchhhCCC---
Confidence 344455555433 4789999999999999999987789999999999999887654 69999999987653
Q ss_pred CCCCCCcEEEECCC---CCCccHHHHHHH-HhCCCCcE-EEEeeC
Q 043853 133 NAFPKPDIVISDPN---RPGMHMKLIKFL-LKLKAPRI-VYVSCN 172 (222)
Q Consensus 133 ~~~~~fD~ii~~pp---~~~~~~~~~~~l-~~l~~~~~-v~~~~~ 172 (222)
+.+.||+|++... ... ...+++.+ +.++ +|. ++++.+
T Consensus 91 -~~~~fD~v~~~~~l~~~~~-~~~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 91 -PDKSVDGVISILAIHHFSH-LEKSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp -CTTCBSEEEEESCGGGCSS-HHHHHHHHHHHBC-SSCEEEEEEC
T ss_pred -CCCCEeEEEEcchHhhccC-HHHHHHHHHHHhC-CcEEEEEEcC
Confidence 2358999999764 222 24555554 4478 884 444444
No 212
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.28 E-value=3e-11 Score=100.30 Aligned_cols=107 Identities=16% Similarity=0.069 Sum_probs=77.9
Q ss_pred CCCeEEEEecccchhHHHHhhc-CCeEEEEeCCHHHHHHHHHHHHHc-------CCCcEEEEeCchhchhh--hcCCCCC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARW-VKHVYGYEVVPQAISDACRNAKLN-------NISNATFVQGDLNKIGG--DFGNAFP 136 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~-~~~v~gvD~~~~~i~~a~~n~~~~-------~~~~v~~~~~d~~~~~~--~~~~~~~ 136 (222)
++.+|||+|||+|.++..+++. ..+++|+|+|+.+++.|+++.... +..+++++++|+.+... .+..+.+
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 4679999999999999988864 559999999999999999998765 33469999999987641 1211224
Q ss_pred CCcEEEECCCCCCc------cHHHHHHHHh-CCCCcEEEEeeCc
Q 043853 137 KPDIVISDPNRPGM------HMKLIKFLLK-LKAPRIVYVSCNP 173 (222)
Q Consensus 137 ~fD~ii~~pp~~~~------~~~~~~~l~~-l~~~~~v~~~~~~ 173 (222)
.||+|+++...... ...++..+.+ ++|+|.+++++..
T Consensus 114 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 114 CFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp CEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 79999997642111 1345555544 7899998877643
No 213
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.27 E-value=3e-11 Score=91.11 Aligned_cols=93 Identities=14% Similarity=0.174 Sum_probs=71.5
Q ss_pred CCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPN 146 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp 146 (222)
++.+|||+|||+|.++..+++.+.+++|+|+++.+++.++++ .+++++..+| ..+ +.+.||+|+++..
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-----~~~v~~~~~d-~~~------~~~~~D~v~~~~~ 84 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEK-----FDSVITLSDP-KEI------PDNSVDFILFANS 84 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHH-----CTTSEEESSG-GGS------CTTCEEEEEEESC
T ss_pred CCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHHh-----CCCcEEEeCC-CCC------CCCceEEEEEccc
Confidence 477999999999999999988766999999999999999998 4478999999 222 2258999998764
Q ss_pred CC--CccHHHHHHHH-hCCCCcEEEEee
Q 043853 147 RP--GMHMKLIKFLL-KLKAPRIVYVSC 171 (222)
Q Consensus 147 ~~--~~~~~~~~~l~-~l~~~~~v~~~~ 171 (222)
.. .-...+++.+. .++|+|.+++..
T Consensus 85 l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 112 (170)
T 3i9f_A 85 FHDMDDKQHVISEVKRILKDDGRVIIID 112 (170)
T ss_dssp STTCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhcccCHHHHHHHHHHhcCCCCEEEEEE
Confidence 21 12345555554 478999887664
No 214
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.27 E-value=1.2e-11 Score=101.42 Aligned_cols=102 Identities=21% Similarity=0.149 Sum_probs=78.0
Q ss_pred CCCeEEEEecccchhHHHHhhcCC-eEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEeCchhchhhhcCCCCCCCcEEEEC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVK-HVYGYEVVPQAISDACRNAKLNNIS-NATFVQGDLNKIGGDFGNAFPKPDIVISD 144 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~-~v~gvD~~~~~i~~a~~n~~~~~~~-~v~~~~~d~~~~~~~~~~~~~~fD~ii~~ 144 (222)
++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.|++++...+.. +++++++|+.+.+.. ..+.||+|+++
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~~fD~v~~~ 140 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMD---LGKEFDVISSQ 140 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCC---CSSCEEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccC---CCCCcCEEEEC
Confidence 478999999999999998887654 9999999999999999999888774 599999999876431 12579999987
Q ss_pred CCC----C--CccHHHHHHHHh-CCCCcEEEEee
Q 043853 145 PNR----P--GMHMKLIKFLLK-LKAPRIVYVSC 171 (222)
Q Consensus 145 pp~----~--~~~~~~~~~l~~-l~~~~~v~~~~ 171 (222)
... . .....+++.+.+ ++|+|.+++..
T Consensus 141 ~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 141 FSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTV 174 (298)
T ss_dssp SCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred chhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 531 1 112344444433 78999888765
No 215
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.27 E-value=2.5e-11 Score=103.73 Aligned_cols=104 Identities=25% Similarity=0.307 Sum_probs=78.3
Q ss_pred CCCeEEEEecccchhHHHHhhc---CCeEEEEeCCHHHHHHHHHHHHHc-----C-C--CcEEEEeCchhchhhhc--CC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARW---VKHVYGYEVVPQAISDACRNAKLN-----N-I--SNATFVQGDLNKIGGDF--GN 133 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~---~~~v~gvD~~~~~i~~a~~n~~~~-----~-~--~~v~~~~~d~~~~~~~~--~~ 133 (222)
++.+|||+|||+|.++..+++. ..+++|+|+|+.+++.|+++++.+ | . ++++++++|+.++.... .-
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~ 162 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV 162 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCC
Confidence 4789999999999999988875 349999999999999999998765 3 2 47999999998763210 11
Q ss_pred CCCCCcEEEECCC---CCCccHHHHHHHH-hCCCCcEEEEee
Q 043853 134 AFPKPDIVISDPN---RPGMHMKLIKFLL-KLKAPRIVYVSC 171 (222)
Q Consensus 134 ~~~~fD~ii~~pp---~~~~~~~~~~~l~-~l~~~~~v~~~~ 171 (222)
+.+.||+|+++.. ... ...+++.+. .|+|+|.++++.
T Consensus 163 ~~~~fD~V~~~~~l~~~~d-~~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 163 PDSSVDIVISNCVCNLSTN-KLALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp CTTCEEEEEEESCGGGCSC-HHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCEEEEEEccchhcCCC-HHHHHHHHHHHcCCCCEEEEEE
Confidence 2358999999874 122 345555554 489999988764
No 216
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=99.27 E-value=9.9e-12 Score=100.64 Aligned_cols=91 Identities=20% Similarity=0.216 Sum_probs=69.4
Q ss_pred HHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHc-------C-C-CcEEEEeCchh
Q 043853 55 KLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLN-------N-I-SNATFVQGDLN 125 (222)
Q Consensus 55 ~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~-------~-~-~~v~~~~~d~~ 125 (222)
+.+.+.+...+....+|||+|||+|..++.++..+.+|+++|+++.+++.++++++.. + + ++++++++|+.
T Consensus 76 e~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~ 155 (258)
T 2oyr_A 76 EAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSL 155 (258)
T ss_dssp SHHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHH
T ss_pred HHHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHH
Confidence 3344445444312279999999999999999987779999999999887777776532 2 3 46999999999
Q ss_pred chhhhcCCCCCCCcEEEECCCCC
Q 043853 126 KIGGDFGNAFPKPDIVISDPNRP 148 (222)
Q Consensus 126 ~~~~~~~~~~~~fD~ii~~pp~~ 148 (222)
++...+. +.||+|++|||+.
T Consensus 156 ~~L~~~~---~~fDvV~lDP~y~ 175 (258)
T 2oyr_A 156 TALTDIT---PRPQVVYLDPMFP 175 (258)
T ss_dssp HHSTTCS---SCCSEEEECCCCC
T ss_pred HHHHhCc---ccCCEEEEcCCCC
Confidence 8765443 3699999999854
No 217
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.27 E-value=1.7e-11 Score=99.98 Aligned_cols=95 Identities=23% Similarity=0.197 Sum_probs=74.7
Q ss_pred CCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPN 146 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp 146 (222)
++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.|+++. +++++..+|+.+++. .+.||+|++...
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~-----~~~fD~v~~~~~ 126 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQNY-----PHLHFDVADARNFRV-----DKPLDAVFSNAM 126 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----TTSCEEECCTTTCCC-----SSCEEEEEEESC
T ss_pred CCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhhC-----CCCEEEECChhhCCc-----CCCcCEEEEcch
Confidence 4789999999999999999887779999999999999999875 468899999987653 147999999764
Q ss_pred C--CCccHHHHHHH-HhCCCCcEEEEee
Q 043853 147 R--PGMHMKLIKFL-LKLKAPRIVYVSC 171 (222)
Q Consensus 147 ~--~~~~~~~~~~l-~~l~~~~~v~~~~ 171 (222)
. -.-...++..+ +.++|+|.+++..
T Consensus 127 l~~~~d~~~~l~~~~~~LkpgG~l~~~~ 154 (279)
T 3ccf_A 127 LHWVKEPEAAIASIHQALKSGGRFVAEF 154 (279)
T ss_dssp GGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhCcCHHHHHHHHHHhcCCCcEEEEEe
Confidence 1 11124555555 4489999988765
No 218
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.27 E-value=2.4e-11 Score=100.77 Aligned_cols=103 Identities=14% Similarity=0.069 Sum_probs=72.1
Q ss_pred CCCeEEEEecccchhHHHHhh-cCCeEEEEeCCHHHHHHHHHHHHHcCCC------cEEEEeCch------hchhhhcCC
Q 043853 67 GSEIVLDLFCGTGTIGLTLAR-WVKHVYGYEVVPQAISDACRNAKLNNIS------NATFVQGDL------NKIGGDFGN 133 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~-~~~~v~gvD~~~~~i~~a~~n~~~~~~~------~v~~~~~d~------~~~~~~~~~ 133 (222)
++.+|||+|||+|..+..++. .+.+|+|+|+|+.|++.|++.....+.. ++++.+.|+ .++....
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~-- 125 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF-- 125 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC--
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc--
Confidence 468999999999987765544 4569999999999999999998776543 267888877 3222111
Q ss_pred CCCCCcEEEECCC------CCCccHHHHHHHHh-CCCCcEEEEeeC
Q 043853 134 AFPKPDIVISDPN------RPGMHMKLIKFLLK-LKAPRIVYVSCN 172 (222)
Q Consensus 134 ~~~~fD~ii~~pp------~~~~~~~~~~~l~~-l~~~~~v~~~~~ 172 (222)
+.+.||+|++.-. .... ..++..+.+ |+|||.+++++.
T Consensus 126 ~~~~FD~V~~~~~lhy~~~~~~~-~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 126 YFGKFNIIDWQFAIHYSFHPRHY-ATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp CSSCEEEEEEESCGGGTCSTTTH-HHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCCeeEEEECchHHHhCCHHHH-HHHHHHHHHHcCCCCEEEEEeC
Confidence 2258999987531 1122 455555544 899999987764
No 219
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.26 E-value=4.1e-11 Score=98.43 Aligned_cols=103 Identities=17% Similarity=0.171 Sum_probs=80.0
Q ss_pred CCCeEEEEecccchhHHHHhhcC--CeEEEEeCCHHHHHHHHHHHHHcC----CCcEEEEeCchhchhhhcCCCCCCCcE
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWV--KHVYGYEVVPQAISDACRNAKLNN----ISNATFVQGDLNKIGGDFGNAFPKPDI 140 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~--~~v~gvD~~~~~i~~a~~n~~~~~----~~~v~~~~~d~~~~~~~~~~~~~~fD~ 140 (222)
++.+|||+|||+|.++..+++.. .+++++|+|+.+++.|++++...+ .++++++.+|+.++.... .+.||+
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~---~~~fD~ 154 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV---TNTYDV 154 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC---CSCEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhC---CCCceE
Confidence 46799999999999999998763 599999999999999999986542 346999999998875432 257999
Q ss_pred EEECCCCC-----Cc-cHHHHHHHHh-CCCCcEEEEeeC
Q 043853 141 VISDPNRP-----GM-HMKLIKFLLK-LKAPRIVYVSCN 172 (222)
Q Consensus 141 ii~~pp~~-----~~-~~~~~~~l~~-l~~~~~v~~~~~ 172 (222)
|++|++.. .+ ...+.+.+.+ ++|+|++++.+.
T Consensus 155 Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 155 IIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp EEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 99987522 11 1466666544 899999887753
No 220
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=99.26 E-value=4.6e-11 Score=106.38 Aligned_cols=164 Identities=15% Similarity=0.159 Sum_probs=104.7
Q ss_pred CccccCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhc-----------------CCeEEEEeCCHHHH
Q 043853 40 NSFFQTNTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARW-----------------VKHVYGYEVVPQAI 102 (222)
Q Consensus 40 ~~f~~~~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~-----------------~~~v~gvD~~~~~i 102 (222)
+.|| ++......+++. +... ..+|+|++||||++.+.+++. ...++|+|+++.++
T Consensus 225 G~fy-TP~~Vv~lmv~l----l~p~---~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~ 296 (544)
T 3khk_A 225 GQYY-TPKSIVTLIVEM----LEPY---KGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTW 296 (544)
T ss_dssp TTTC-CCHHHHHHHHHH----HCCC---SEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHH
T ss_pred CeEe-CCHHHHHHHHHH----HhcC---CCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHH
Confidence 3455 345555554443 3221 239999999999999876532 24799999999999
Q ss_pred HHHHHHHHHcCCCc-EEEEeCchhchhhhcCCCCCCCcEEEECCCCCCc-------------------------c-----
Q 043853 103 SDACRNAKLNNISN-ATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGM-------------------------H----- 151 (222)
Q Consensus 103 ~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~~~-------------------------~----- 151 (222)
..|+.|+..++++. +.+.++|....+.. ...+||+|++|||.... .
T Consensus 297 ~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~---~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~ 373 (544)
T 3khk_A 297 KLAAMNMVIRGIDFNFGKKNADSFLDDQH---PDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNA 373 (544)
T ss_dssp HHHHHHHHHTTCCCBCCSSSCCTTTSCSC---TTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCT
T ss_pred HHHHHHHHHhCCCcccceeccchhcCccc---ccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcch
Confidence 99999999998853 55588887654321 12479999999995421 0
Q ss_pred -HHHHH-HHHhCCCCcEEEEeeCcc------chHhhHH-HhhccCCCCccCCC-eEEeEeeeeccCCCCCceeEEEEEEe
Q 043853 152 -MKLIK-FLLKLKAPRIVYVSCNPA------TCARDLD-YLCHGVGDQNIKGC-YKLKSLQPVDMFPHTPHIECVCLLEL 221 (222)
Q Consensus 152 -~~~~~-~l~~l~~~~~v~~~~~~~------~~~~~~~-~l~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~v~~~~~ 221 (222)
-.++. .+..++++|.+.+-+... .....++ .+. +.+ ..-+-.-|-.+|..+..-.+|.+|.|
T Consensus 374 ~~~Fl~~~l~~Lk~gGr~aiVlP~g~L~~~~~~~~~iRk~Ll--------e~~~l~aII~LP~~lF~~t~i~t~Ilvl~K 445 (544)
T 3khk_A 374 NFAWMLHMLYHLAPTGSMALLLANGSMSSNTNNEGEIRKTLV--------EQDLVECMVALPGQLFTNTQIPACIWFLTK 445 (544)
T ss_dssp HHHHHHHHHHTEEEEEEEEEEEETHHHHCCGGGHHHHHHHHH--------HTTCEEEEEECCTTBCCSCSSCEEEEEEES
T ss_pred hHHHHHHHHHHhccCceEEEEecchhhhcCcchHHHHHHHHH--------hCCcHhEEEECCCCCCCCCCCCeEEEEEec
Confidence 12334 345578877754333211 1223343 332 333 33333345678998888999999986
Q ss_pred C
Q 043853 222 S 222 (222)
Q Consensus 222 ~ 222 (222)
.
T Consensus 446 ~ 446 (544)
T 3khk_A 446 D 446 (544)
T ss_dssp C
T ss_pred C
Confidence 3
No 221
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.26 E-value=1.9e-11 Score=101.56 Aligned_cols=102 Identities=12% Similarity=0.084 Sum_probs=79.4
Q ss_pred CeEEEEecccchhHHHHhhc--CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCC
Q 043853 69 EIVLDLFCGTGTIGLTLARW--VKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPN 146 (222)
Q Consensus 69 ~~vlDlg~G~G~~~~~la~~--~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp 146 (222)
.+|||||||+|.++..+++. ..+++++|+|+.+++.|++++.....++++++.+|+.++..... .+.||+|++|.+
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~--~~~fDvIi~D~~ 168 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFT--PASRDVIIRDVF 168 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCC--TTCEEEEEECCS
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhcc--CCCCCEEEECCC
Confidence 39999999999999998874 34899999999999999999865544579999999998865432 247999999864
Q ss_pred CCC------ccHHHHHHHHh-CCCCcEEEEeeC
Q 043853 147 RPG------MHMKLIKFLLK-LKAPRIVYVSCN 172 (222)
Q Consensus 147 ~~~------~~~~~~~~l~~-l~~~~~v~~~~~ 172 (222)
... ...++.+.+.+ |+++|++++.+.
T Consensus 169 ~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 169 AGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp TTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 211 12566666644 899999876664
No 222
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.26 E-value=2e-11 Score=98.16 Aligned_cols=95 Identities=20% Similarity=0.264 Sum_probs=75.1
Q ss_pred CCCeEEEEecccchhHHHHhhc--CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEEC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARW--VKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISD 144 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~--~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~ 144 (222)
++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++ .++++++.+|+.+++. .+.||+|+++
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~-----~~~fD~v~~~ 102 (259)
T 2p35_A 33 RVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR-----LPNTNFGKADLATWKP-----AQKADLLYAN 102 (259)
T ss_dssp CCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH-----STTSEEEECCTTTCCC-----SSCEEEEEEE
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh-----CCCcEEEECChhhcCc-----cCCcCEEEEe
Confidence 4689999999999999999886 67999999999999999987 3468999999987651 2579999997
Q ss_pred CCC--CCccHHHHHHHH-hCCCCcEEEEee
Q 043853 145 PNR--PGMHMKLIKFLL-KLKAPRIVYVSC 171 (222)
Q Consensus 145 pp~--~~~~~~~~~~l~-~l~~~~~v~~~~ 171 (222)
... ..-...+++.+. .++|+|.+++++
T Consensus 103 ~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 103 AVFQWVPDHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp SCGGGSTTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CchhhCCCHHHHHHHHHHhcCCCeEEEEEe
Confidence 641 112345555554 478999988776
No 223
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=99.25 E-value=2.1e-10 Score=104.78 Aligned_cols=104 Identities=13% Similarity=0.205 Sum_probs=73.0
Q ss_pred ccccCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcC-----CeEEEEeCCHHHHHHH--HHHHHHc-
Q 043853 41 SFFQTNTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWV-----KHVYGYEVVPQAISDA--CRNAKLN- 112 (222)
Q Consensus 41 ~f~~~~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~-----~~v~gvD~~~~~i~~a--~~n~~~~- 112 (222)
+-+.++......+++++.........++.+|+|+|||+|.+++.+++.. .+++|+|+++.+++.| +.|+..+
T Consensus 295 GqFYTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~ 374 (878)
T 3s1s_A 295 GVVPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQ 374 (878)
T ss_dssp BSSSCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTT
T ss_pred ceEcCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhh
Confidence 3344557777776666444443222347899999999999999888754 2799999999999999 7776553
Q ss_pred ---CCCcEEEEeCchhchhhhcCCCCCCCcEEEECCCC
Q 043853 113 ---NISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNR 147 (222)
Q Consensus 113 ---~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~ 147 (222)
+++...+...|..+.... ....||+|++|||+
T Consensus 375 LlhGi~~~~I~~dD~L~~~~~---~~~kFDVVIgNPPY 409 (878)
T 3s1s_A 375 LVSSNNAPTITGEDVCSLNPE---DFANVSVVVMNPPY 409 (878)
T ss_dssp TCBTTBCCEEECCCGGGCCGG---GGTTEEEEEECCBC
T ss_pred hhcCCCcceEEecchhccccc---ccCCCCEEEECCCc
Confidence 333346667777653221 12479999999996
No 224
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.25 E-value=2.7e-11 Score=102.03 Aligned_cols=110 Identities=17% Similarity=0.130 Sum_probs=82.1
Q ss_pred CCCeEEEEecccchhHHHHhhcC-CeEEEEeCCHHHHHHHHHHHHHcC---C-----CcEEEEeCchhchhhhcCCCCCC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWV-KHVYGYEVVPQAISDACRNAKLNN---I-----SNATFVQGDLNKIGGDFGNAFPK 137 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~-~~v~gvD~~~~~i~~a~~n~~~~~---~-----~~v~~~~~d~~~~~~~~~~~~~~ 137 (222)
++.+||++|||+|+++..+++.. .+|+++|+|+.+++.|++++...+ + ++++++.+|+.++........++
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 57899999999999999877654 589999999999999999975321 1 15999999999987643111257
Q ss_pred CcEEEECCCC-C-C------ccHHHHHHH-----HhCCCCcEEEEeeCccch
Q 043853 138 PDIVISDPNR-P-G------MHMKLIKFL-----LKLKAPRIVYVSCNPATC 176 (222)
Q Consensus 138 fD~ii~~pp~-~-~------~~~~~~~~l-----~~l~~~~~v~~~~~~~~~ 176 (222)
||+||+|||. + + ...++.+.+ +.|+|+|++++.++...+
T Consensus 268 fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~ 319 (364)
T 2qfm_A 268 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNL 319 (364)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTC
T ss_pred ceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcch
Confidence 9999999864 1 1 224555554 458999998877755443
No 225
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.24 E-value=1.6e-11 Score=98.29 Aligned_cols=96 Identities=13% Similarity=0.112 Sum_probs=72.6
Q ss_pred CCeEEEEecccchhHHHHhhc------CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhch--hhhcCCCCCCCc
Q 043853 68 SEIVLDLFCGTGTIGLTLARW------VKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKI--GGDFGNAFPKPD 139 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~------~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~--~~~~~~~~~~fD 139 (222)
+.+|||+|||+|..+..+++. ..+|+|+|+|+.+++.|+. . .++++++++|+.+. ..... ...||
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~----~-~~~v~~~~gD~~~~~~l~~~~--~~~fD 154 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS----D-MENITLHQGDCSDLTTFEHLR--EMAHP 154 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG----G-CTTEEEEECCSSCSGGGGGGS--SSCSS
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc----c-CCceEEEECcchhHHHHHhhc--cCCCC
Confidence 579999999999999999876 4699999999999998871 1 24699999999875 22111 12699
Q ss_pred EEEECCCCCCccHHHHHHHH--hCCCCcEEEEee
Q 043853 140 IVISDPNRPGMHMKLIKFLL--KLKAPRIVYVSC 171 (222)
Q Consensus 140 ~ii~~pp~~~~~~~~~~~l~--~l~~~~~v~~~~ 171 (222)
+|+++...... ..++..+. .++++|+++++.
T Consensus 155 ~I~~d~~~~~~-~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 155 LIFIDNAHANT-FNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp EEEEESSCSSH-HHHHHHHHHHTCCTTCEEEECS
T ss_pred EEEECCchHhH-HHHHHHHHHhhCCCCCEEEEEe
Confidence 99988764433 45555543 689999998753
No 226
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.24 E-value=1.9e-11 Score=101.81 Aligned_cols=102 Identities=20% Similarity=0.154 Sum_probs=77.0
Q ss_pred CCCeEEEEecccchhHHHHhhc--CCeEEEEeCCHHHHHHHHHHHHHc--CC--CcEEEEeCchhchhhhcCCCCCCCcE
Q 043853 67 GSEIVLDLFCGTGTIGLTLARW--VKHVYGYEVVPQAISDACRNAKLN--NI--SNATFVQGDLNKIGGDFGNAFPKPDI 140 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~--~~~v~gvD~~~~~i~~a~~n~~~~--~~--~~v~~~~~d~~~~~~~~~~~~~~fD~ 140 (222)
+..+|||+|||+|.++..+++. ..+++++|+|+.+++.|++++... ++ ++++++.+|+.++... ..+.||+
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~---~~~~fD~ 184 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKN---HKNEFDV 184 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHH---CTTCEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHh---cCCCceE
Confidence 3579999999999999999876 359999999999999999998653 32 4699999999886543 1257999
Q ss_pred EEECCCCC-----Ccc-HHHHHHHH-hCCCCcEEEEee
Q 043853 141 VISDPNRP-----GMH-MKLIKFLL-KLKAPRIVYVSC 171 (222)
Q Consensus 141 ii~~pp~~-----~~~-~~~~~~l~-~l~~~~~v~~~~ 171 (222)
|++|++.. .+. ..+.+.+. .|+|+|++++..
T Consensus 185 Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 185 IITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp EEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred EEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 99998521 111 45555554 489999998875
No 227
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=99.22 E-value=6.7e-11 Score=96.89 Aligned_cols=98 Identities=11% Similarity=-0.048 Sum_probs=70.6
Q ss_pred HHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCCe----EEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh
Q 043853 54 YKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVKH----VYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG 129 (222)
Q Consensus 54 ~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~~----v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~ 129 (222)
.+.+.+.+... ++.+|||+|||+|.++..+++.+.+ ++|+|+|+.+++.++++. .++++++++|+.++..
T Consensus 31 ~~~iv~~~~~~--~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~----~~~v~~i~~D~~~~~~ 104 (279)
T 3uzu_A 31 IDAIVAAIRPE--RGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF----GELLELHAGDALTFDF 104 (279)
T ss_dssp HHHHHHHHCCC--TTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH----GGGEEEEESCGGGCCG
T ss_pred HHHHHHhcCCC--CcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc----CCCcEEEECChhcCCh
Confidence 33444544433 3789999999999999999987766 999999999999999983 3469999999988754
Q ss_pred hcCCC-C-CCCcEEEECCCCCCccHHHHHHH
Q 043853 130 DFGNA-F-PKPDIVISDPNRPGMHMKLIKFL 158 (222)
Q Consensus 130 ~~~~~-~-~~fD~ii~~pp~~~~~~~~~~~l 158 (222)
....+ . .....|++|+|+.-. ..++..+
T Consensus 105 ~~~~~~~~~~~~~vv~NlPY~is-s~il~~l 134 (279)
T 3uzu_A 105 GSIARPGDEPSLRIIGNLPYNIS-SPLLFHL 134 (279)
T ss_dssp GGGSCSSSSCCEEEEEECCHHHH-HHHHHHH
T ss_pred hHhcccccCCceEEEEccCcccc-HHHHHHH
Confidence 31111 0 134689999996432 3444333
No 228
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.22 E-value=3.6e-11 Score=95.37 Aligned_cols=95 Identities=22% Similarity=0.202 Sum_probs=72.7
Q ss_pred CCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECC-
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDP- 145 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~p- 145 (222)
++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.|+++. ++++++++|+.+... .+.||+|++..
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~-----~~~~D~v~~~~~ 109 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARKRL-----PDATLHQGDMRDFRL-----GRKFSAVVSMFS 109 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHHHC-----TTCEEEECCTTTCCC-----SSCEEEEEECTT
T ss_pred CCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhC-----CCCEEEECCHHHccc-----CCCCcEEEEcCc
Confidence 4689999999999999999887779999999999999999874 468999999987643 24799999533
Q ss_pred C--CC---CccHHHHHHHH-hCCCCcEEEEee
Q 043853 146 N--RP---GMHMKLIKFLL-KLKAPRIVYVSC 171 (222)
Q Consensus 146 p--~~---~~~~~~~~~l~-~l~~~~~v~~~~ 171 (222)
. .- .....+++.+. .++|+|.++++.
T Consensus 110 ~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 110 SVGYLKTTEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp GGGGCCSHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred hHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 1 11 11234444443 378999988875
No 229
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.21 E-value=5.7e-11 Score=92.68 Aligned_cols=94 Identities=18% Similarity=0.050 Sum_probs=71.9
Q ss_pred CCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPN 146 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp 146 (222)
++.+|||+|||+|.++..+ ...+++|+|+|+.+++.++++. ++++++++|+.+.+. +.+.||+|++...
T Consensus 36 ~~~~vLdiG~G~G~~~~~l--~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~----~~~~fD~v~~~~~ 104 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL--PYPQKVGVEPSEAMLAVGRRRA-----PEATWVRAWGEALPF----PGESFDVVLLFTT 104 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC--CCSEEEEECCCHHHHHHHHHHC-----TTSEEECCCTTSCCS----CSSCEEEEEEESC
T ss_pred CCCeEEEECCCCCHhHHhC--CCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcccccCCC----CCCcEEEEEEcCh
Confidence 5789999999999999887 3339999999999999999886 468999999987643 2247999998764
Q ss_pred CC--CccHHHHHHHH-hCCCCcEEEEee
Q 043853 147 RP--GMHMKLIKFLL-KLKAPRIVYVSC 171 (222)
Q Consensus 147 ~~--~~~~~~~~~l~-~l~~~~~v~~~~ 171 (222)
.. .....+++.+. .++|+|.++++.
T Consensus 105 l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 132 (211)
T 2gs9_A 105 LEFVEDVERVLLEARRVLRPGGALVVGV 132 (211)
T ss_dssp TTTCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhcCCHHHHHHHHHHHcCCCCEEEEEe
Confidence 21 12345555554 478999888765
No 230
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=99.21 E-value=1e-10 Score=94.27 Aligned_cols=98 Identities=13% Similarity=0.093 Sum_probs=72.0
Q ss_pred HHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhc-CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhc
Q 043853 53 LYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARW-VKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDF 131 (222)
Q Consensus 53 ~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~-~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~ 131 (222)
+.+.+.+.+... ++.+|||+|||+|.++..+++. ..+++|+|+|+.+++.++++ +..+++++++|+.++....
T Consensus 19 i~~~iv~~~~~~--~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~----~~~~v~~i~~D~~~~~~~~ 92 (249)
T 3ftd_A 19 VLKKIAEELNIE--EGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI----GDERLEVINEDASKFPFCS 92 (249)
T ss_dssp HHHHHHHHTTCC--TTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS----CCTTEEEECSCTTTCCGGG
T ss_pred HHHHHHHhcCCC--CcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc----cCCCeEEEEcchhhCChhH
Confidence 344455555433 3789999999999999999987 47999999999999999987 2346999999998875432
Q ss_pred CCCCCCCcEEEECCCCCCccHHHHHHHH
Q 043853 132 GNAFPKPDIVISDPNRPGMHMKLIKFLL 159 (222)
Q Consensus 132 ~~~~~~fD~ii~~pp~~~~~~~~~~~l~ 159 (222)
.. + ...|++|+|+....+-+...+.
T Consensus 93 ~~--~-~~~vv~NlPy~i~~~il~~ll~ 117 (249)
T 3ftd_A 93 LG--K-ELKVVGNLPYNVASLIIENTVY 117 (249)
T ss_dssp SC--S-SEEEEEECCTTTHHHHHHHHHH
T ss_pred cc--C-CcEEEEECchhccHHHHHHHHh
Confidence 11 1 3489999998654333344443
No 231
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.20 E-value=1.4e-10 Score=93.74 Aligned_cols=95 Identities=17% Similarity=0.089 Sum_probs=73.4
Q ss_pred CCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPN 146 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp 146 (222)
++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.|+++.. .+ ++++|+.+++. +.+.||+|++...
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~----~~--~~~~d~~~~~~----~~~~fD~v~~~~~ 123 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAREKGV----KN--VVEAKAEDLPF----PSGAFEAVLALGD 123 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHHTC----SC--EEECCTTSCCS----CTTCEEEEEECSS
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHHHHHHhhcC----CC--EEECcHHHCCC----CCCCEEEEEEcch
Confidence 46899999999999999999888899999999999999998754 22 88889877642 2257999999753
Q ss_pred ----CCCccHHHHHHHHh-CCCCcEEEEeeC
Q 043853 147 ----RPGMHMKLIKFLLK-LKAPRIVYVSCN 172 (222)
Q Consensus 147 ----~~~~~~~~~~~l~~-l~~~~~v~~~~~ 172 (222)
... ...+++.+.+ ++|+|.++++..
T Consensus 124 ~~~~~~~-~~~~l~~~~~~LkpgG~l~~~~~ 153 (260)
T 2avn_A 124 VLSYVEN-KDKAFSEIRRVLVPDGLLIATVD 153 (260)
T ss_dssp HHHHCSC-HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhcccc-HHHHHHHHHHHcCCCeEEEEEeC
Confidence 122 3555555544 789999887653
No 232
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.19 E-value=6.2e-11 Score=106.31 Aligned_cols=76 Identities=24% Similarity=0.216 Sum_probs=66.6
Q ss_pred CCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECC
Q 043853 68 SEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDP 145 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~p 145 (222)
+-+|||+|||.|.++..+|+.+.+|+|||.++.+++.|+..+...+.-++++.++++.++..... .+.||+|++.-
T Consensus 67 ~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~--~~~fD~v~~~e 142 (569)
T 4azs_A 67 PLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALE--EGEFDLAIGLS 142 (569)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCC--TTSCSEEEEES
T ss_pred CCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhcc--CCCccEEEECc
Confidence 46999999999999999999999999999999999999999998876579999999998854322 24799999864
No 233
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=99.19 E-value=7.3e-10 Score=98.42 Aligned_cols=101 Identities=15% Similarity=0.158 Sum_probs=74.6
Q ss_pred CccccCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhc---------------CCeEEEEeCCHHHHHH
Q 043853 40 NSFFQTNTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARW---------------VKHVYGYEVVPQAISD 104 (222)
Q Consensus 40 ~~f~~~~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~---------------~~~v~gvD~~~~~i~~ 104 (222)
+.||. +.+.... +.+++. +.++.+|+|.+||||++.+.+.+. ...++|+|+++.++..
T Consensus 197 GqfyT-P~~Vv~l----mv~l~~--p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~l 269 (530)
T 3ufb_A 197 GEFYT-PRPVVRF----MVEVMD--PQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLL 269 (530)
T ss_dssp CCCCC-CHHHHHH----HHHHHC--CCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHH
T ss_pred ceECC-cHHHHHH----HHHhhc--cCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHH
Confidence 56664 3455444 444443 234779999999999999866542 1369999999999999
Q ss_pred HHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCCC
Q 043853 105 ACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNR 147 (222)
Q Consensus 105 a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~ 147 (222)
|+-|+..+|++...+..+|....+.....+..+||+|++|||.
T Consensus 270 a~mNl~lhg~~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf 312 (530)
T 3ufb_A 270 VQMNLLLHGLEYPRIDPENSLRFPLREMGDKDRVDVILTNPPF 312 (530)
T ss_dssp HHHHHHHHTCSCCEEECSCTTCSCGGGCCGGGCBSEEEECCCS
T ss_pred HHHHHHhcCCccccccccccccCchhhhcccccceEEEecCCC
Confidence 9999999998777888999876543322223479999999995
No 234
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.19 E-value=4.9e-10 Score=86.70 Aligned_cols=120 Identities=16% Similarity=0.182 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchh
Q 043853 49 QAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIG 128 (222)
Q Consensus 49 ~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~ 128 (222)
..-.+.++.... ... .++.+|||+|||+|.++..+++...+|+|+|+++.. ..++++++++|+.+..
T Consensus 9 a~~KL~ei~~~~-~~~-~~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~-----------~~~~v~~~~~D~~~~~ 75 (191)
T 3dou_A 9 AAFKLEFLLDRY-RVV-RKGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEME-----------EIAGVRFIRCDIFKET 75 (191)
T ss_dssp HHHHHHHHHHHH-CCS-CTTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCC-----------CCTTCEEEECCTTSSS
T ss_pred HHHHHHHHHHHc-CCC-CCCCEEEEEeecCCHHHHHHHHcCCcEEEEeccccc-----------cCCCeEEEEccccCHH
Confidence 344445544443 222 247899999999999999999888899999999741 2457999999987743
Q ss_pred hh------cC-CCCCCCcEEEECCCCC--Ccc-----------HHHHHH-HHhCCCCcEEEEeeCccchHhhHH
Q 043853 129 GD------FG-NAFPKPDIVISDPNRP--GMH-----------MKLIKF-LLKLKAPRIVYVSCNPATCARDLD 181 (222)
Q Consensus 129 ~~------~~-~~~~~fD~ii~~pp~~--~~~-----------~~~~~~-l~~l~~~~~v~~~~~~~~~~~~~~ 181 (222)
.. +. ...+.||+|++|++.. +.. ..+++. ...|+|+|.+++..........+.
T Consensus 76 ~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~~~~~ 149 (191)
T 3dou_A 76 IFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMTNDFI 149 (191)
T ss_dssp HHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHHHHHH
T ss_pred HHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCHHHHH
Confidence 11 00 0002799999998532 210 122222 234899999887664333333333
No 235
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.18 E-value=6.8e-10 Score=90.97 Aligned_cols=104 Identities=11% Similarity=0.046 Sum_probs=68.9
Q ss_pred CCCeEEEEecccchhHHHHhh-cCCeEEEEeCCHHHHHHHHHHHHHc-----------------CC-------------C
Q 043853 67 GSEIVLDLFCGTGTIGLTLAR-WVKHVYGYEVVPQAISDACRNAKLN-----------------NI-------------S 115 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~-~~~~v~gvD~~~~~i~~a~~n~~~~-----------------~~-------------~ 115 (222)
++.+|||+|||+|.....++. .+.+|+|+|+|+.|++.|+++++.. +. .
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 150 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRAR 150 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhh
Confidence 478999999999996655544 3669999999999999999865421 10 0
Q ss_pred cEEEEeCchhc-hhhhc-CCCCCCCcEEEECCCC----CC--ccHHHHHHHHh-CCCCcEEEEe
Q 043853 116 NATFVQGDLNK-IGGDF-GNAFPKPDIVISDPNR----PG--MHMKLIKFLLK-LKAPRIVYVS 170 (222)
Q Consensus 116 ~v~~~~~d~~~-~~~~~-~~~~~~fD~ii~~pp~----~~--~~~~~~~~l~~-l~~~~~v~~~ 170 (222)
.++++.+|+.+ .+... ..+.+.||+|+++... .. -...++..+.+ |+|+|.+++.
T Consensus 151 ~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~ 214 (289)
T 2g72_A 151 VKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLI 214 (289)
T ss_dssp EEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred hceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 15678889877 32110 1112469999998631 11 12344444443 7899998875
No 236
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.18 E-value=5.8e-10 Score=88.96 Aligned_cols=140 Identities=16% Similarity=0.109 Sum_probs=86.1
Q ss_pred CCCeEEEEecccchhHHHHhhcC-CeEEEEeCCHHHHHHHHHHHHHcCCCcEEEE-eCchhchh-hhcCCCCCCCcEEEE
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWV-KHVYGYEVVPQAISDACRNAKLNNISNATFV-QGDLNKIG-GDFGNAFPKPDIVIS 143 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~-~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~-~~d~~~~~-~~~~~~~~~fD~ii~ 143 (222)
++.+|||+|||+|.++..+++.+ .+|+|+|+|+.|++.|+++.. ++... ..++.... ..+. ...||.+.+
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~-----~~~~~~~~~~~~~~~~~~~--~~~~d~~~~ 109 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDE-----RVVVMEQFNFRNAVLADFE--QGRPSFTSI 109 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCT-----TEEEECSCCGGGCCGGGCC--SCCCSEEEE
T ss_pred CCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCc-----cccccccceEEEeCHhHcC--cCCCCEEEE
Confidence 46799999999999999888876 499999999999999877532 23222 22332221 1111 113566666
Q ss_pred CCCCCCccHHHHHHH-HhCCCCcEEEEeeCccc---------------------hHhhHHHhhccCCCCccCCCeEEeEe
Q 043853 144 DPNRPGMHMKLIKFL-LKLKAPRIVYVSCNPAT---------------------CARDLDYLCHGVGDQNIKGCYKLKSL 201 (222)
Q Consensus 144 ~pp~~~~~~~~~~~l-~~l~~~~~v~~~~~~~~---------------------~~~~~~~l~~~~~~~~~~~~~~~~~~ 201 (222)
|.....+ ..++..+ +.++|+|.+++...+.. ...++..+++ +.||++..+
T Consensus 110 D~v~~~l-~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~-------~aGf~v~~~ 181 (232)
T 3opn_A 110 DVSFISL-DLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTAT-------QLGFSVKGL 181 (232)
T ss_dssp CCSSSCG-GGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHH-------HHTEEEEEE
T ss_pred EEEhhhH-HHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHH-------HCCCEEEEE
Confidence 6654444 3444444 45899998887643211 0112222222 568998887
Q ss_pred eeeccCCCCCceeEEEEEEe
Q 043853 202 QPVDMFPHTPHIECVCLLEL 221 (222)
Q Consensus 202 ~~~~~~p~~~~~~~v~~~~~ 221 (222)
......-....++-++.++|
T Consensus 182 ~~~pi~g~~gn~e~l~~~~~ 201 (232)
T 3opn_A 182 TFSPIKGGAGNVEFLVHLLK 201 (232)
T ss_dssp EECSSCBTTTBCCEEEEEEE
T ss_pred EEccCCCCCCCHHHHHHHhh
Confidence 76554444556777776665
No 237
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.16 E-value=3.4e-10 Score=88.99 Aligned_cols=89 Identities=15% Similarity=0.062 Sum_probs=68.3
Q ss_pred CCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCCC
Q 043853 68 SEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNR 147 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~ 147 (222)
+.+|||+|||+|.++..+++. +|+|+|+.+++.++++ +++++.+|+.+.+. +.+.||+|++....
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~----~~vD~s~~~~~~a~~~-------~~~~~~~d~~~~~~----~~~~fD~v~~~~~l 112 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK----IGVEPSERMAEIARKR-------GVFVLKGTAENLPL----KDESFDFALMVTTI 112 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC----EEEESCHHHHHHHHHT-------TCEEEECBTTBCCS----CTTCEEEEEEESCG
T ss_pred CCcEEEeCCCCCHHHHHHHHH----hccCCCHHHHHHHHhc-------CCEEEEcccccCCC----CCCCeeEEEEcchH
Confidence 679999999999999988765 9999999999999986 47899999877642 22479999987541
Q ss_pred --CCccHHHHHHHH-hCCCCcEEEEee
Q 043853 148 --PGMHMKLIKFLL-KLKAPRIVYVSC 171 (222)
Q Consensus 148 --~~~~~~~~~~l~-~l~~~~~v~~~~ 171 (222)
..-...+++.+. .++|+|.++++.
T Consensus 113 ~~~~~~~~~l~~~~~~L~pgG~l~i~~ 139 (219)
T 1vlm_A 113 CFVDDPERALKEAYRILKKGGYLIVGI 139 (219)
T ss_dssp GGSSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhccCHHHHHHHHHHHcCCCcEEEEEE
Confidence 111245555554 478999888765
No 238
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.16 E-value=1.7e-09 Score=91.72 Aligned_cols=99 Identities=17% Similarity=0.101 Sum_probs=75.5
Q ss_pred CCCeEEEEecccchhHHHHhhcC--CeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEeCchhchhhhcCCCCCCCcEEEE
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWV--KHVYGYEVVPQAISDACRNAKLNNIS-NATFVQGDLNKIGGDFGNAFPKPDIVIS 143 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~--~~v~gvD~~~~~i~~a~~n~~~~~~~-~v~~~~~d~~~~~~~~~~~~~~fD~ii~ 143 (222)
++.+|||+|||+|.++..+++.. .+++++|+ +.+++.|++++...++. +++++.+|+.+... ..||+|++
T Consensus 182 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~------~~~D~v~~ 254 (374)
T 1qzz_A 182 AVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPLP------VTADVVLL 254 (374)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCS------CCEEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcCC------CCCCEEEE
Confidence 46899999999999999998864 48999999 99999999999998886 59999999976221 24999998
Q ss_pred CCCCCCcc----HHHHHHHHh-CCCCcEEEEeeC
Q 043853 144 DPNRPGMH----MKLIKFLLK-LKAPRIVYVSCN 172 (222)
Q Consensus 144 ~pp~~~~~----~~~~~~l~~-l~~~~~v~~~~~ 172 (222)
........ ..+++.+.+ ++|+|.+++...
T Consensus 255 ~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 255 SFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred eccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 75421111 245555543 789997776543
No 239
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.15 E-value=7.1e-10 Score=83.28 Aligned_cols=95 Identities=16% Similarity=0.092 Sum_probs=68.6
Q ss_pred CCCeEEEEecccchhHHHHhhc---CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh-----h-cCCCCCC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARW---VKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG-----D-FGNAFPK 137 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~---~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~-----~-~~~~~~~ 137 (222)
++.+|||+|||+|.++..+++. ..+++|+|+++ +++. .++++.++|+.+... . + +.+.
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----------~~~~~~~~d~~~~~~~~~~~~~~--~~~~ 88 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI----------VGVDFLQGDFRDELVMKALLERV--GDSK 88 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC----------TTEEEEESCTTSHHHHHHHHHHH--TTCC
T ss_pred CCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc----------CcEEEEEcccccchhhhhhhccC--CCCc
Confidence 4779999999999999988876 25999999998 6532 468999999987641 0 1 1247
Q ss_pred CcEEEECCCCCCc--c-----------HHHHHHH-HhCCCCcEEEEeeCcc
Q 043853 138 PDIVISDPNRPGM--H-----------MKLIKFL-LKLKAPRIVYVSCNPA 174 (222)
Q Consensus 138 fD~ii~~pp~~~~--~-----------~~~~~~l-~~l~~~~~v~~~~~~~ 174 (222)
||+|++++|.... . ..+++.+ +.++++|.+++.....
T Consensus 89 ~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 89 VQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp EEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred eeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 9999999874321 1 3444444 3478999988766433
No 240
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=99.14 E-value=7.1e-11 Score=95.39 Aligned_cols=91 Identities=10% Similarity=-0.039 Sum_probs=66.4
Q ss_pred HHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCCe--EEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhc
Q 043853 54 YKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVKH--VYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDF 131 (222)
Q Consensus 54 ~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~~--v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~ 131 (222)
.+.+.+.+... ++.+|||+|||+|.++. +++ +.+ ++|+|+|+.+++.+++++... ++++++++|+.++...-
T Consensus 10 ~~~iv~~~~~~--~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~~~~~~a~~~~~~~--~~v~~i~~D~~~~~~~~ 83 (252)
T 1qyr_A 10 IDSIVSAINPQ--KGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDRDLAARLQTHPFLG--PKLTIYQQDAMTFNFGE 83 (252)
T ss_dssp HHHHHHHHCCC--TTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCHHHHHHHHTCTTTG--GGEEEECSCGGGCCHHH
T ss_pred HHHHHHhcCCC--CcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCHHHHHHHHHHhccC--CceEEEECchhhCCHHH
Confidence 34444444433 37799999999999999 765 567 999999999999999887542 47999999998864321
Q ss_pred CCC-CCCCcEEEECCCCCCc
Q 043853 132 GNA-FPKPDIVISDPNRPGM 150 (222)
Q Consensus 132 ~~~-~~~fD~ii~~pp~~~~ 150 (222)
..+ .+..+.|++|+|+...
T Consensus 84 ~~~~~~~~~~vvsNlPY~i~ 103 (252)
T 1qyr_A 84 LAEKMGQPLRVFGNLPYNIS 103 (252)
T ss_dssp HHHHHTSCEEEEEECCTTTH
T ss_pred hhcccCCceEEEECCCCCcc
Confidence 000 0145899999997643
No 241
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.12 E-value=4e-10 Score=88.50 Aligned_cols=96 Identities=22% Similarity=0.246 Sum_probs=71.7
Q ss_pred CCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPN 146 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp 146 (222)
++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.++++. .++..+|+.+....+ +.+.||+|+++..
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~-------~~~~~~d~~~~~~~~--~~~~fD~v~~~~~ 102 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAKEKL-------DHVVLGDIETMDMPY--EEEQFDCVIFGDV 102 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHHHHHTTS-------SEEEESCTTTCCCCS--CTTCEEEEEEESC
T ss_pred CCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC-------CcEEEcchhhcCCCC--CCCccCEEEECCh
Confidence 5789999999999999999877779999999999999998753 378889987643222 2257999998753
Q ss_pred C--CCccHHHHHHHHh-CCCCcEEEEee
Q 043853 147 R--PGMHMKLIKFLLK-LKAPRIVYVSC 171 (222)
Q Consensus 147 ~--~~~~~~~~~~l~~-l~~~~~v~~~~ 171 (222)
. ..-...+++.+.+ ++++|.++++.
T Consensus 103 l~~~~~~~~~l~~~~~~L~~gG~l~~~~ 130 (230)
T 3cc8_A 103 LEHLFDPWAVIEKVKPYIKQNGVILASI 130 (230)
T ss_dssp GGGSSCHHHHHHHTGGGEEEEEEEEEEE
T ss_pred hhhcCCHHHHHHHHHHHcCCCCEEEEEe
Confidence 1 1112455555544 78999888765
No 242
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.12 E-value=4.5e-09 Score=89.28 Aligned_cols=98 Identities=12% Similarity=0.121 Sum_probs=75.2
Q ss_pred CCCeEEEEecccchhHHHHhhcCC--eEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEeCchhchhhhcCCCCCCCcEEEE
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVK--HVYGYEVVPQAISDACRNAKLNNIS-NATFVQGDLNKIGGDFGNAFPKPDIVIS 143 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~--~v~gvD~~~~~i~~a~~n~~~~~~~-~v~~~~~d~~~~~~~~~~~~~~fD~ii~ 143 (222)
+..+|||+|||+|.++..+++..+ +++++|+ |.+++.|++++...++. ++++..+|+.+... ..||+|++
T Consensus 202 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p------~~~D~v~~ 274 (369)
T 3gwz_A 202 GAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFETIP------DGADVYLI 274 (369)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTCCC------SSCSEEEE
T ss_pred cCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCCCC------CCceEEEh
Confidence 468999999999999999988754 8999999 99999999999988874 59999999973211 26999988
Q ss_pred CCCCCCcc-H---HHHHHHHh-CCCCcEEEEee
Q 043853 144 DPNRPGMH-M---KLIKFLLK-LKAPRIVYVSC 171 (222)
Q Consensus 144 ~pp~~~~~-~---~~~~~l~~-l~~~~~v~~~~ 171 (222)
.-...... . .+++.+.+ ++|+|.+++..
T Consensus 275 ~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e 307 (369)
T 3gwz_A 275 KHVLHDWDDDDVVRILRRIATAMKPDSRLLVID 307 (369)
T ss_dssp ESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred hhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 65311111 1 45555544 78999887644
No 243
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.12 E-value=2e-09 Score=88.42 Aligned_cols=98 Identities=15% Similarity=0.010 Sum_probs=67.0
Q ss_pred CCCeEEEEecccchhHHHHhhcC-CeEEEEeCCHHHHHHHHHHHHHcCCCcEE-EEeCchhchhhhcCCCCCCCcEEEEC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWV-KHVYGYEVVPQAISDACRNAKLNNISNAT-FVQGDLNKIGGDFGNAFPKPDIVISD 144 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~-~~v~gvD~~~~~i~~a~~n~~~~~~~~v~-~~~~d~~~~~~~~~~~~~~fD~ii~~ 144 (222)
++.+|||+|||||.++..+++.+ .+|+|+|+|+.|++.+.++ .+++. +...|+..+..... +...||+++++
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~-----~~rv~~~~~~ni~~l~~~~l-~~~~fD~v~~d 158 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQ-----DDRVRSMEQYNFRYAEPVDF-TEGLPSFASID 158 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHT-----CTTEEEECSCCGGGCCGGGC-TTCCCSEEEEC
T ss_pred cccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHh-----CcccceecccCceecchhhC-CCCCCCEEEEE
Confidence 46799999999999999888764 5999999999999986443 12333 33455544432211 12249999998
Q ss_pred CCCCCccHHHHHHHHhCCCCcEEEEe
Q 043853 145 PNRPGMHMKLIKFLLKLKAPRIVYVS 170 (222)
Q Consensus 145 pp~~~~~~~~~~~l~~l~~~~~v~~~ 170 (222)
.....+..-+.+..+.++|+|.+++.
T Consensus 159 ~sf~sl~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 159 VSFISLNLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp CSSSCGGGTHHHHHHHSCTTCEEEEE
T ss_pred eeHhhHHHHHHHHHHHcCcCCEEEEE
Confidence 76555533333344558999988766
No 244
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.11 E-value=6.7e-10 Score=89.89 Aligned_cols=93 Identities=20% Similarity=0.188 Sum_probs=71.9
Q ss_pred CCCeEEEEecccchhHHHHhhc--CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEEC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARW--VKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISD 144 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~--~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~ 144 (222)
++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.|+++. .++.+..+|+.+++. ..+.||+|++.
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~----~~~~fD~v~~~ 155 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY-----PQVTFCVASSHRLPF----SDTSMDAIIRI 155 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTSCSB----CTTCEEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcchhhCCC----CCCceeEEEEe
Confidence 4679999999999999999876 569999999999999998874 358899999977643 12479999987
Q ss_pred CCCCCccHHHHHHHHhCCCCcEEEEeeC
Q 043853 145 PNRPGMHMKLIKFLLKLKAPRIVYVSCN 172 (222)
Q Consensus 145 pp~~~~~~~~~~~l~~l~~~~~v~~~~~ 172 (222)
.... .+.+..+.++|+|.+++...
T Consensus 156 ~~~~----~l~~~~~~L~pgG~l~~~~~ 179 (269)
T 1p91_A 156 YAPC----KAEELARVVKPGGWVITATP 179 (269)
T ss_dssp SCCC----CHHHHHHHEEEEEEEEEEEE
T ss_pred CChh----hHHHHHHhcCCCcEEEEEEc
Confidence 5422 13333445789998877664
No 245
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.10 E-value=3.7e-09 Score=89.35 Aligned_cols=98 Identities=16% Similarity=0.151 Sum_probs=75.7
Q ss_pred CCCeEEEEecccchhHHHHhhcCC--eEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhhhcCCCCCCCcEEEE
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVK--HVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGDFGNAFPKPDIVIS 143 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~--~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~~~~~~~fD~ii~ 143 (222)
+..+|||+|||+|.++..+++..+ +++++|+ +.+++.|+++++..++++ ++++.+|+.+.+. ..+|+|++
T Consensus 190 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~------~~~D~v~~ 262 (359)
T 1x19_A 190 GVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESY------PEADAVLF 262 (359)
T ss_dssp TCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCC------CCCSEEEE
T ss_pred CCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCC------CCCCEEEE
Confidence 478999999999999999988754 9999999 999999999999988865 9999999987532 23599988
Q ss_pred CCCCCCc----cHHHHHHHHh-CCCCcEEEEee
Q 043853 144 DPNRPGM----HMKLIKFLLK-LKAPRIVYVSC 171 (222)
Q Consensus 144 ~pp~~~~----~~~~~~~l~~-l~~~~~v~~~~ 171 (222)
....... ...+++.+.+ ++|+|.+++..
T Consensus 263 ~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 263 CRILYSANEQLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp ESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred echhccCCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 6542111 2344555544 78998886543
No 246
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.08 E-value=2.1e-10 Score=93.20 Aligned_cols=95 Identities=15% Similarity=-0.015 Sum_probs=74.2
Q ss_pred CCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHH----cCCCcEEEEeCchhchhhhcCCCCCCCcEEE
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKL----NNISNATFVQGDLNKIGGDFGNAFPKPDIVI 142 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~----~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii 142 (222)
+..+|||+|||+|.++..+++...+++++|+|+.+++.|++++.. ...++++++.+|+.++. ++||+|+
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~-------~~fD~Ii 144 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI-------KKYDLIF 144 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC-------CCEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH-------hhCCEEE
Confidence 457999999999999998776546999999999999999987643 12346999999998865 3799999
Q ss_pred ECCCCCCccHHHHHHHH-hCCCCcEEEEee
Q 043853 143 SDPNRPGMHMKLIKFLL-KLKAPRIVYVSC 171 (222)
Q Consensus 143 ~~pp~~~~~~~~~~~l~-~l~~~~~v~~~~ 171 (222)
++.+.. ..+.+.+. .|+|+|++.+..
T Consensus 145 ~d~~dp---~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 145 CLQEPD---IHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp ESSCCC---HHHHHHHHTTEEEEEEEEEEE
T ss_pred ECCCCh---HHHHHHHHHhcCCCcEEEEEc
Confidence 997532 23555554 489999988754
No 247
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.08 E-value=1.4e-11 Score=98.95 Aligned_cols=88 Identities=15% Similarity=0.136 Sum_probs=69.2
Q ss_pred HHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCC
Q 043853 55 KLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNA 134 (222)
Q Consensus 55 ~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~ 134 (222)
+.+.+.+... ++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.|++++. ..++++++++|+.++... .
T Consensus 19 ~~i~~~~~~~--~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~--~~~~v~~~~~D~~~~~~~---~ 91 (245)
T 1yub_A 19 NQIIKQLNLK--ETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLK--LNTRVTLIHQDILQFQFP---N 91 (245)
T ss_dssp HHHHHHCCCC--SSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTT--TCSEEEECCSCCTTTTCC---C
T ss_pred HHHHHhcCCC--CCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhc--cCCceEEEECChhhcCcc---c
Confidence 3444554433 47899999999999999999888899999999999999998875 335699999999887532 1
Q ss_pred CCCCcEEEECCCCCCc
Q 043853 135 FPKPDIVISDPNRPGM 150 (222)
Q Consensus 135 ~~~fD~ii~~pp~~~~ 150 (222)
.+.| .|++|||+...
T Consensus 92 ~~~f-~vv~n~Py~~~ 106 (245)
T 1yub_A 92 KQRY-KIVGNIPYHLS 106 (245)
T ss_dssp SSEE-EEEEECCSSSC
T ss_pred CCCc-EEEEeCCcccc
Confidence 1367 89999997654
No 248
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.06 E-value=5.6e-09 Score=85.24 Aligned_cols=102 Identities=11% Similarity=0.028 Sum_probs=73.5
Q ss_pred CCeEEEEeccc---chhHHHHhhc--CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhh-------cCCCC
Q 043853 68 SEIVLDLFCGT---GTIGLTLARW--VKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGD-------FGNAF 135 (222)
Q Consensus 68 ~~~vlDlg~G~---G~~~~~la~~--~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~-------~~~~~ 135 (222)
..+|||+|||+ |.++..+++. ..+|+++|+||.|++.|++++.. .++++++++|+.+.... ..-+.
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~~d~ 155 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK--DPNTAVFTADVRDPEYILNHPDVRRMIDF 155 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT--CTTEEEEECCTTCHHHHHHSHHHHHHCCT
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC--CCCeEEEEeeCCCchhhhccchhhccCCC
Confidence 47999999999 9887666554 35999999999999999998843 24699999999764211 00112
Q ss_pred CCCcEEEECCC-----CCCccHHHHHHHHh-CCCCcEEEEeeC
Q 043853 136 PKPDIVISDPN-----RPGMHMKLIKFLLK-LKAPRIVYVSCN 172 (222)
Q Consensus 136 ~~fD~ii~~pp-----~~~~~~~~~~~l~~-l~~~~~v~~~~~ 172 (222)
+.||+|++..- .. ....++..+.+ ++|+|.++++..
T Consensus 156 ~~~d~v~~~~vlh~~~d~-~~~~~l~~~~~~L~pGG~l~i~~~ 197 (274)
T 2qe6_A 156 SRPAAIMLVGMLHYLSPD-VVDRVVGAYRDALAPGSYLFMTSL 197 (274)
T ss_dssp TSCCEEEETTTGGGSCTT-THHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCEEEEEechhhhCCcH-HHHHHHHHHHHhCCCCcEEEEEEe
Confidence 37999998752 22 23556666554 899999887763
No 249
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.06 E-value=7.3e-10 Score=89.06 Aligned_cols=93 Identities=14% Similarity=0.118 Sum_probs=73.9
Q ss_pred CCCeEEEEecccchhHHHHhhcC--CeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEEC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWV--KHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISD 144 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~--~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~ 144 (222)
+..+|||+|||+|.+++.++... .+++++|+|+.+++.+++|+..+|++ .++...|...-... ..||++++.
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~-~~~~v~D~~~~~p~-----~~~DvaL~l 205 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVP-HRTNVADLLEDRLD-----EPADVTLLL 205 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCC-EEEEECCTTTSCCC-----SCCSEEEET
T ss_pred CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEeeecccCCC-----CCcchHHHH
Confidence 36799999999999999887653 49999999999999999999999986 88999988665432 589999997
Q ss_pred CC-------CCCccHHHHHHHHhCCCCcEEE
Q 043853 145 PN-------RPGMHMKLIKFLLKLKAPRIVY 168 (222)
Q Consensus 145 pp-------~~~~~~~~~~~l~~l~~~~~v~ 168 (222)
-. +.+ ...+.+..++++++++
T Consensus 206 kti~~Le~q~kg---~g~~ll~aL~~~~vvV 233 (281)
T 3lcv_B 206 KTLPCLETQQRG---SGWEVIDIVNSPNIVV 233 (281)
T ss_dssp TCHHHHHHHSTT---HHHHHHHHSSCSEEEE
T ss_pred HHHHHhhhhhhH---HHHHHHHHhCCCCEEE
Confidence 53 222 2225666678888766
No 250
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.02 E-value=1.3e-09 Score=91.93 Aligned_cols=98 Identities=18% Similarity=0.167 Sum_probs=74.7
Q ss_pred CCCeEEEEecccchhHHHHhhcCC--eEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEeCchhchhhhcCCCCCCCcEEEE
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVK--HVYGYEVVPQAISDACRNAKLNNIS-NATFVQGDLNKIGGDFGNAFPKPDIVIS 143 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~--~v~gvD~~~~~i~~a~~n~~~~~~~-~v~~~~~d~~~~~~~~~~~~~~fD~ii~ 143 (222)
++.+|||+|||+|.++..+++..+ +++++|+ +.+++.|++++...+++ +++++.+|+.+... ..||+|++
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~------~~~D~v~~ 255 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPLP------RKADAIIL 255 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCCS------SCEEEEEE
T ss_pred cCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCCC------CCccEEEE
Confidence 468999999999999999987653 8999999 99999999999998886 59999999976321 24999988
Q ss_pred CCCCCCcc----HHHHHHHHh-CCCCcEEEEee
Q 043853 144 DPNRPGMH----MKLIKFLLK-LKAPRIVYVSC 171 (222)
Q Consensus 144 ~pp~~~~~----~~~~~~l~~-l~~~~~v~~~~ 171 (222)
........ ..+++.+.. ++|+|.+++..
T Consensus 256 ~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 288 (360)
T 1tw3_A 256 SFVLLNWPDHDAVRILTRCAEALEPGGRILIHE 288 (360)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cccccCCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 65421111 245555544 78998877653
No 251
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.02 E-value=1.1e-09 Score=91.29 Aligned_cols=99 Identities=18% Similarity=0.245 Sum_probs=74.9
Q ss_pred CCCeEEEEecccchhHHHHhhc--CCeEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhhhcCCCCCCCcEEEE
Q 043853 67 GSEIVLDLFCGTGTIGLTLARW--VKHVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGDFGNAFPKPDIVIS 143 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~--~~~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~~~~~~~fD~ii~ 143 (222)
+..+|||+|||+|.++..+++. ..+++++|++ .+++.|++++...++++ ++++.+|+.+... . +.||+|++
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~---~~~D~v~~ 238 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDY--G---NDYDLVLL 238 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCC--C---SCEEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCC--C---CCCcEEEE
Confidence 4689999999999999999876 4599999999 99999999999888864 9999999987532 1 24999998
Q ss_pred CCCCCCc----cHHHHHHHHh-CCCCcEEEEee
Q 043853 144 DPNRPGM----HMKLIKFLLK-LKAPRIVYVSC 171 (222)
Q Consensus 144 ~pp~~~~----~~~~~~~l~~-l~~~~~v~~~~ 171 (222)
.-.-... ...+++.+.+ ++|+|.+++..
T Consensus 239 ~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 271 (335)
T 2r3s_A 239 PNFLHHFDVATCEQLLRKIKTALAVEGKVIVFD 271 (335)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cchhccCCHHHHHHHHHHHHHhCCCCcEEEEEe
Confidence 5431111 1344444433 78888776544
No 252
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.02 E-value=3.7e-09 Score=88.36 Aligned_cols=98 Identities=14% Similarity=0.028 Sum_probs=74.2
Q ss_pred CCCeEEEEecccchhHHHHhhcCC--eEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEeCchhchhhhcCCCCCCCcEEEE
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVK--HVYGYEVVPQAISDACRNAKLNNIS-NATFVQGDLNKIGGDFGNAFPKPDIVIS 143 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~--~v~gvD~~~~~i~~a~~n~~~~~~~-~v~~~~~d~~~~~~~~~~~~~~fD~ii~ 143 (222)
+..+|||+|||+|.++..+++..+ +++++|+ |.+++.|++++...++. ++++..+|+.+.. + ..||+|++
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----p-~~~D~v~~ 241 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDPL-----P-AGAGGYVL 241 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-----C-CSCSEEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCCC-----C-CCCcEEEE
Confidence 467999999999999999987643 8999999 99999999999988874 5999999997421 1 26999988
Q ss_pred CCCCCCc----cHHHHHHHHh-CCCCcEEEEee
Q 043853 144 DPNRPGM----HMKLIKFLLK-LKAPRIVYVSC 171 (222)
Q Consensus 144 ~pp~~~~----~~~~~~~l~~-l~~~~~v~~~~ 171 (222)
.-.-... ...+++.+.+ ++|+|.+++..
T Consensus 242 ~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 274 (332)
T 3i53_A 242 SAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIE 274 (332)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred ehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 6431111 1344454433 78999887654
No 253
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.02 E-value=3.1e-09 Score=90.06 Aligned_cols=101 Identities=14% Similarity=0.053 Sum_probs=75.0
Q ss_pred CCCeEEEEecccchhHHHHhhcC--CeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEeCchhchhhhcCCCCCCCcEEEE
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWV--KHVYGYEVVPQAISDACRNAKLNNIS-NATFVQGDLNKIGGDFGNAFPKPDIVIS 143 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~--~~v~gvD~~~~~i~~a~~n~~~~~~~-~v~~~~~d~~~~~~~~~~~~~~fD~ii~ 143 (222)
+..+|||+|||+|.++..+++.. .+++++|+ |.+++.|++++...++. +++++.+|+.+....+. +.||+|++
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p---~~~D~v~~ 254 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP---TGFDAVWM 254 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC---CCCSEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC---CCcCEEEE
Confidence 46799999999999999998754 48999999 99999999999888774 59999999987420111 37999988
Q ss_pred CCCCCCcc----HHHHHHHH-hCCCCcEEEEee
Q 043853 144 DPNRPGMH----MKLIKFLL-KLKAPRIVYVSC 171 (222)
Q Consensus 144 ~pp~~~~~----~~~~~~l~-~l~~~~~v~~~~ 171 (222)
.-.-.... ..+++.+. .++|+|.+++..
T Consensus 255 ~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 255 SQFLDCFSEEEVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp ESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred echhhhCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 64321111 23444443 489999887644
No 254
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.01 E-value=2.8e-09 Score=84.78 Aligned_cols=92 Identities=20% Similarity=0.249 Sum_probs=72.8
Q ss_pred CCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPN 146 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp 146 (222)
+..+|||+|||+|.+++.+. ....++|+|+|+.+++.+++++..++. +..+..+|....+.. ..||++++.-.
T Consensus 105 ~p~~VLDlGCG~gpLal~~~-~~~~y~a~DId~~~i~~ar~~~~~~g~-~~~~~v~D~~~~~~~-----~~~DvvLllk~ 177 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER-GIASVWGCDIHQGLGDVITPFAREKDW-DFTFALQDVLCAPPA-----EAGDLALIFKL 177 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT-TCSEEEEEESBHHHHHHHHHHHHHTTC-EEEEEECCTTTSCCC-----CBCSEEEEESC
T ss_pred CCCeEEEecCCccHHHHHhc-cCCeEEEEeCCHHHHHHHHHHHHhcCC-CceEEEeecccCCCC-----CCcchHHHHHH
Confidence 46799999999999999887 566999999999999999999998885 589999999765532 47999988731
Q ss_pred -------CCCccHHHHHHHHhCCCCcEEE
Q 043853 147 -------RPGMHMKLIKFLLKLKAPRIVY 168 (222)
Q Consensus 147 -------~~~~~~~~~~~l~~l~~~~~v~ 168 (222)
..+ ...+.+..++++++++
T Consensus 178 lh~LE~q~~~---~~~~ll~aL~~~~vvV 203 (253)
T 3frh_A 178 LPLLEREQAG---SAMALLQSLNTPRMAV 203 (253)
T ss_dssp HHHHHHHSTT---HHHHHHHHCBCSEEEE
T ss_pred HHHhhhhchh---hHHHHHHHhcCCCEEE
Confidence 222 2235555678887665
No 255
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.01 E-value=1.5e-09 Score=89.12 Aligned_cols=104 Identities=13% Similarity=0.087 Sum_probs=69.4
Q ss_pred CCCeEEEEecccchhHHHH----hhcC--Ce--EEEEeCCHHHHHHHHHHHHHc-CCCcE--EEEeCchhchhhhcC--C
Q 043853 67 GSEIVLDLFCGTGTIGLTL----ARWV--KH--VYGYEVVPQAISDACRNAKLN-NISNA--TFVQGDLNKIGGDFG--N 133 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~l----a~~~--~~--v~gvD~~~~~i~~a~~n~~~~-~~~~v--~~~~~d~~~~~~~~~--~ 133 (222)
++.+|||+|||+|.++..+ +... .. ++|+|.|+.|++.|++++... +++++ .+..+++.++...+. -
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKK 131 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcccc
Confidence 4679999999999876532 2222 33 399999999999999998754 55554 556777766542110 0
Q ss_pred CCCCCcEEEECCC---CCCccHHHHHHHHh-CCCCcEEEEee
Q 043853 134 AFPKPDIVISDPN---RPGMHMKLIKFLLK-LKAPRIVYVSC 171 (222)
Q Consensus 134 ~~~~fD~ii~~pp---~~~~~~~~~~~l~~-l~~~~~v~~~~ 171 (222)
+.+.||+|++.-. ..+. ..++..+.+ |+|+|.+++..
T Consensus 132 ~~~~fD~V~~~~~l~~~~d~-~~~l~~~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 132 ELQKWDFIHMIQMLYYVKDI-PATLKFFHSLLGTNAKMLIIV 172 (292)
T ss_dssp CCCCEEEEEEESCGGGCSCH-HHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCceeEEEEeeeeeecCCH-HHHHHHHHHHcCCCcEEEEEE
Confidence 1257999998753 2232 455555544 79999887653
No 256
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.99 E-value=1e-08 Score=79.13 Aligned_cols=93 Identities=23% Similarity=0.322 Sum_probs=64.4
Q ss_pred CCCeEEEEecccchhHHHHhhcC----CeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh-------------
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWV----KHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG------------- 129 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~----~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~------------- 129 (222)
++.+|||+|||+|.++..+++.. .+++|+|+|+.+ ..++++++++|+.+...
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~ 90 (201)
T 2plw_A 22 KNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PIPNVYFIQGEIGKDNMNNIKNINYIDNMN 90 (201)
T ss_dssp TTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CCTTCEEEECCTTTTSSCCC----------
T ss_pred CCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CCCCceEEEccccchhhhhhcccccccccc
Confidence 46899999999999999998753 589999999831 23568999999977540
Q ss_pred ----------hcCCCCCCCcEEEECCCCC--Cc---cH--------HHHHHH-HhCCCCcEEEEeeC
Q 043853 130 ----------DFGNAFPKPDIVISDPNRP--GM---HM--------KLIKFL-LKLKAPRIVYVSCN 172 (222)
Q Consensus 130 ----------~~~~~~~~fD~ii~~pp~~--~~---~~--------~~~~~l-~~l~~~~~v~~~~~ 172 (222)
.+ +...||+|+++++.. +. .. .++..+ +.++|+|.+++...
T Consensus 91 ~~~~~~~~~~~~--~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 155 (201)
T 2plw_A 91 NNSVDYKLKEIL--QDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMY 155 (201)
T ss_dssp -CHHHHHHHHHH--TTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred chhhHHHHHhhc--CCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEe
Confidence 01 124799999987522 11 10 123333 34789999887553
No 257
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.97 E-value=2e-09 Score=90.65 Aligned_cols=100 Identities=16% Similarity=0.173 Sum_probs=75.9
Q ss_pred CCeEEEEecccchhHHHHhhcC--CeEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhhhcCCCCCCCcEEEEC
Q 043853 68 SEIVLDLFCGTGTIGLTLARWV--KHVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGDFGNAFPKPDIVISD 144 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~~--~~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~~~~~~~fD~ii~~ 144 (222)
..+|||+|||+|.++..+++.. .+++++|+ +.+++.|++++...++.+ ++++.+|+.+...... ..||+|++.
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~---~~~D~v~~~ 255 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEG---GAADVVMLN 255 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTT---CCEEEEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCC---CCccEEEEe
Confidence 6899999999999999998864 48999999 889999999999888764 9999999987642111 369999986
Q ss_pred CCCCCcc----HHHHHHHHh-CCCCcEEEEee
Q 043853 145 PNRPGMH----MKLIKFLLK-LKAPRIVYVSC 171 (222)
Q Consensus 145 pp~~~~~----~~~~~~l~~-l~~~~~v~~~~ 171 (222)
..-.... ..+++.+.+ ++|+|.+++..
T Consensus 256 ~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (352)
T 3mcz_A 256 DCLHYFDAREAREVIGHAAGLVKPGGALLILT 287 (352)
T ss_dssp SCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cccccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 5321111 345555543 78988887644
No 258
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.96 E-value=6.3e-10 Score=90.41 Aligned_cols=98 Identities=10% Similarity=0.030 Sum_probs=78.1
Q ss_pred CCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCCC
Q 043853 68 SEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNR 147 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~ 147 (222)
+..+||+++|||.+++.+...+.+++.+|.++..++..++|++. .+++++++.|.......+..+..+||+|++|||+
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~~d~~vfvE~~~~a~~~L~~Nl~~--~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPPY 169 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHF--NKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSY 169 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCTTSEEEEECCSHHHHHHHTTSCCT--TSCEEEECSCHHHHHHHHCSCTTSCEEEEECCCC
T ss_pred CCCceeEeCCcHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHhCc--CCcEEEEeCcHHHHHHHhcCCCCCccEEEECCCC
Confidence 45789999999999997776668999999999999999999864 3469999999988766544444579999999997
Q ss_pred C--CccHHHHHHHHh---CCCCcEE
Q 043853 148 P--GMHMKLIKFLLK---LKAPRIV 167 (222)
Q Consensus 148 ~--~~~~~~~~~l~~---l~~~~~v 167 (222)
. +....+++.+.. ..+.|++
T Consensus 170 e~k~~~~~vl~~L~~~~~r~~~Gi~ 194 (283)
T 2oo3_A 170 ERKEEYKEIPYAIKNAYSKFSTGLY 194 (283)
T ss_dssp CSTTHHHHHHHHHHHHHHHCTTSEE
T ss_pred CCCcHHHHHHHHHHHhCccCCCeEE
Confidence 5 466677766654 3566654
No 259
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.95 E-value=1e-08 Score=79.82 Aligned_cols=113 Identities=16% Similarity=0.142 Sum_probs=80.5
Q ss_pred CCeEEEEecccchhHHHHhhc-CCeEEEEeCCHHHHHHHHHHHHHcCC---CcEEEEeCchhch--------------hh
Q 043853 68 SEIVLDLFCGTGTIGLTLARW-VKHVYGYEVVPQAISDACRNAKLNNI---SNATFVQGDLNKI--------------GG 129 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~-~~~v~gvD~~~~~i~~a~~n~~~~~~---~~v~~~~~d~~~~--------------~~ 129 (222)
.++|||+|| |+-++.+|+. ..+|+++|.+++..+.|+++++..|+ ++++++.+|+.+. ..
T Consensus 31 a~~VLEiGt--GySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l~ 108 (202)
T 3cvo_A 31 AEVILEYGS--GGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSYP 108 (202)
T ss_dssp CSEEEEESC--SHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGTT
T ss_pred CCEEEEECc--hHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhHH
Confidence 679999998 5777788875 57999999999999999999999996 4599999997543 11
Q ss_pred hc------CCCCCCCcEEEECCCCCCccHHHHHHHHhCCCCcEEEEee-CccchHhhHHHhh
Q 043853 130 DF------GNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSC-NPATCARDLDYLC 184 (222)
Q Consensus 130 ~~------~~~~~~fD~ii~~pp~~~~~~~~~~~l~~l~~~~~v~~~~-~~~~~~~~~~~l~ 184 (222)
.+ .....+||+||+|-... ...+...+..++++|++++.- -.......+..+.
T Consensus 109 ~~~~~i~~~~~~~~fDlIfIDg~k~--~~~~~~~l~~l~~GG~Iv~DNv~~r~~y~~v~~~~ 168 (202)
T 3cvo_A 109 DYPLAVWRTEGFRHPDVVLVDGRFR--VGCALATAFSITRPVTLLFDDYSQRRWQHQVEEFL 168 (202)
T ss_dssp HHHHGGGGCTTCCCCSEEEECSSSH--HHHHHHHHHHCSSCEEEEETTGGGCSSGGGGHHHH
T ss_pred HHhhhhhccccCCCCCEEEEeCCCc--hhHHHHHHHhcCCCeEEEEeCCcCCcchHHHHHHH
Confidence 10 01125799999997533 244555667789999886543 1333344455554
No 260
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.94 E-value=1.6e-09 Score=93.35 Aligned_cols=96 Identities=10% Similarity=0.131 Sum_probs=69.0
Q ss_pred CCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcE--EEEeCchhchhhhcCCCCCCCcEEEEC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNA--TFVQGDLNKIGGDFGNAFPKPDIVISD 144 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v--~~~~~d~~~~~~~~~~~~~~fD~ii~~ 144 (222)
++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.|+++ +++.. .+...+...++.. .+.||+|++.
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l~~~----~~~fD~I~~~ 178 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDVRRT----EGPANVIYAA 178 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHHHHH----HCCEEEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhcccC----CCCEEEEEEC
Confidence 478999999999999999998888999999999999999876 44321 1223444444321 2479999987
Q ss_pred CC---CCCccHHHHHHHHh-CCCCcEEEEee
Q 043853 145 PN---RPGMHMKLIKFLLK-LKAPRIVYVSC 171 (222)
Q Consensus 145 pp---~~~~~~~~~~~l~~-l~~~~~v~~~~ 171 (222)
-. ... ...+++.+.+ ++|+|.++++.
T Consensus 179 ~vl~h~~d-~~~~l~~~~r~LkpgG~l~i~~ 208 (416)
T 4e2x_A 179 NTLCHIPY-VQSVLEGVDALLAPDGVFVFED 208 (416)
T ss_dssp SCGGGCTT-HHHHHHHHHHHEEEEEEEEEEE
T ss_pred ChHHhcCC-HHHHHHHHHHHcCCCeEEEEEe
Confidence 53 122 3455555544 79999998865
No 261
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.94 E-value=3.3e-09 Score=86.59 Aligned_cols=101 Identities=14% Similarity=0.139 Sum_probs=68.6
Q ss_pred CCeEEEEecccch----hHHHHhhc-C-----CeEEEEeCCHHHHHHHHHHHHH-----------------------cC-
Q 043853 68 SEIVLDLFCGTGT----IGLTLARW-V-----KHVYGYEVVPQAISDACRNAKL-----------------------NN- 113 (222)
Q Consensus 68 ~~~vlDlg~G~G~----~~~~la~~-~-----~~v~gvD~~~~~i~~a~~n~~~-----------------------~~- 113 (222)
..+|||+|||||. +++.+++. . .+|+|+|+|+.|++.|++++.. .+
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~ 185 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGL 185 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCc
Confidence 5799999999998 55556553 2 3899999999999999997510 01
Q ss_pred --C-----CcEEEEeCchhchhhhcCCCCCCCcEEEECCCC----CCccHHHHHHHHh-CCCCcEEEEee
Q 043853 114 --I-----SNATFVQGDLNKIGGDFGNAFPKPDIVISDPNR----PGMHMKLIKFLLK-LKAPRIVYVSC 171 (222)
Q Consensus 114 --~-----~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~----~~~~~~~~~~l~~-l~~~~~v~~~~ 171 (222)
+ ++++|.++|+.+.+.. ..+.||+|+|.--. ......++..+.. |+|+|++++..
T Consensus 186 ~~v~~~lr~~V~F~~~dl~~~~~~---~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg~ 252 (274)
T 1af7_A 186 VRVRQELANYVEFSSVNLLEKQYN---VPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAGH 252 (274)
T ss_dssp EEECHHHHTTEEEEECCTTCSSCC---CCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEECT
T ss_pred eeechhhcccCeEEecccCCCCCC---cCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEEe
Confidence 0 2489999999874221 12479999994320 0112344554443 79999998754
No 262
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.93 E-value=3.5e-09 Score=77.46 Aligned_cols=106 Identities=13% Similarity=0.154 Sum_probs=79.2
Q ss_pred CCccccCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEecccc-hhHHHHhh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCc
Q 043853 39 ANSFFQTNTHQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTG-TIGLTLAR-WVKHVYGYEVVPQAISDACRNAKLNNISN 116 (222)
Q Consensus 39 ~~~f~~~~~~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G-~~~~~la~-~~~~v~gvD~~~~~i~~a~~n~~~~~~~~ 116 (222)
.++..+....+.+.+.+++.+.. .++.+|||+|||.| ..+..|++ .+..|+++|++|.+++
T Consensus 11 ~~~~~~~~~~m~e~LaeYI~~~~----~~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~------------- 73 (153)
T 2k4m_A 11 SSGLVPRGSHMWNDLAVYIIRCS----GPGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG------------- 73 (153)
T ss_dssp CCCCCCCCCHHHHHHHHHHHHHS----CSSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT-------------
T ss_pred cCCcccchhhHHHHHHHHHHhcC----CCCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc-------------
Confidence 45566666678888888887765 23569999999999 59999997 6779999999998877
Q ss_pred EEEEeCchhchhhhcCCCCCCCcEE-EECCCCCCccHHHHHHHHhCCCCcEE
Q 043853 117 ATFVQGDLNKIGGDFGNAFPKPDIV-ISDPNRPGMHMKLIKFLLKLKAPRIV 167 (222)
Q Consensus 117 v~~~~~d~~~~~~~~~~~~~~fD~i-i~~pp~~~~~~~~~~~l~~l~~~~~v 167 (222)
+++.|+++.....- ..||+| -++|| .++++.+++..+.....-++
T Consensus 74 --~v~dDiF~P~~~~Y---~~~DLIYsirPP-~El~~~i~~lA~~v~adliI 119 (153)
T 2k4m_A 74 --IVRDDITSPRMEIY---RGAALIYSIRPP-AEIHSSLMRVADAVGARLII 119 (153)
T ss_dssp --EECCCSSSCCHHHH---TTEEEEEEESCC-TTTHHHHHHHHHHHTCEEEE
T ss_pred --eEEccCCCCccccc---CCcCEEEEcCCC-HHHHHHHHHHHHHcCCCEEE
Confidence 88899987544321 279999 77777 46777777777665543333
No 263
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.92 E-value=2.2e-08 Score=76.86 Aligned_cols=95 Identities=18% Similarity=0.182 Sum_probs=64.9
Q ss_pred CCCeEEEEecccchhHHHHhhcC-----------CeEEEEeCCHHHHHHHHHHHHHcCCCcEEEE-eCchhchhhh----
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWV-----------KHVYGYEVVPQAISDACRNAKLNNISNATFV-QGDLNKIGGD---- 130 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~-----------~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~-~~d~~~~~~~---- 130 (222)
++.+|||+|||+|.++..+++.. .+++|+|+|+.+ ..++++++ .+|+.+....
T Consensus 22 ~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~~~~~~~~~~d~~~~~~~~~~~ 90 (196)
T 2nyu_A 22 PGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PLEGATFLCPADVTDPRTSQRIL 90 (196)
T ss_dssp TTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CCTTCEEECSCCTTSHHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cCCCCeEEEeccCCCHHHHHHHH
Confidence 47899999999999999998763 689999999831 23568899 9998664321
Q ss_pred -cCCCCCCCcEEEECCCCC--Ccc-----------HHHHHH-HHhCCCCcEEEEeeCc
Q 043853 131 -FGNAFPKPDIVISDPNRP--GMH-----------MKLIKF-LLKLKAPRIVYVSCNP 173 (222)
Q Consensus 131 -~~~~~~~fD~ii~~pp~~--~~~-----------~~~~~~-l~~l~~~~~v~~~~~~ 173 (222)
.. +...||+|+++++.. +.. ..+++. .+.++|+|.+++....
T Consensus 91 ~~~-~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 91 EVL-PGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWA 147 (196)
T ss_dssp HHS-GGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred Hhc-CCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC
Confidence 00 113799999987422 111 133333 3448999998877543
No 264
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.89 E-value=6e-09 Score=87.01 Aligned_cols=96 Identities=14% Similarity=0.066 Sum_probs=73.0
Q ss_pred CeEEEEecccchhHHHHhhcC--CeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEeCchhchhhhcCCCCCCCcEEEECC
Q 043853 69 EIVLDLFCGTGTIGLTLARWV--KHVYGYEVVPQAISDACRNAKLNNIS-NATFVQGDLNKIGGDFGNAFPKPDIVISDP 145 (222)
Q Consensus 69 ~~vlDlg~G~G~~~~~la~~~--~~v~gvD~~~~~i~~a~~n~~~~~~~-~v~~~~~d~~~~~~~~~~~~~~fD~ii~~p 145 (222)
.+|||+|||+|..+..+++.. .+++++|+ +.+++.|++++...++. +++++.+|+.+. . . ..||+|++..
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~--~---~~~D~v~~~~ 241 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQE-V--P---SNGDIYLLSR 241 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTC-C--C---SSCSEEEEES
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCC-C--C---CCCCEEEEch
Confidence 799999999999999998764 48999999 99999999998877654 599999999772 1 1 3699999865
Q ss_pred CCCCc-c---HHHHHHHH-hCCCCcEEEEee
Q 043853 146 NRPGM-H---MKLIKFLL-KLKAPRIVYVSC 171 (222)
Q Consensus 146 p~~~~-~---~~~~~~l~-~l~~~~~v~~~~ 171 (222)
..... . ..+++.+. .++|+|.+++..
T Consensus 242 vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 272 (334)
T 2ip2_A 242 IIGDLDEAASLRLLGNCREAMAGDGRVVVIE 272 (334)
T ss_dssp CGGGCCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred hccCCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 42111 1 24445443 389999887664
No 265
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=98.89 E-value=2.4e-08 Score=84.10 Aligned_cols=130 Identities=16% Similarity=0.206 Sum_probs=89.3
Q ss_pred CCeEEEEecccchhHHHHhhcC---CeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEEC
Q 043853 68 SEIVLDLFCGTGTIGLTLARWV---KHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISD 144 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~~---~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~ 144 (222)
..+++|++||.|++++.+...+ ..+.++|+++.+++..+.|.. +..++++|+.++...... ...+|+++.+
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~-----~~~~~~~Di~~~~~~~~~-~~~~D~l~~g 75 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP-----HTQLLAKTIEGITLEEFD-RLSFDMILMS 75 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT-----TSCEECSCGGGCCHHHHH-HHCCSEEEEC
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc-----ccccccCCHHHccHhHcC-cCCcCEEEEc
Confidence 3589999999999999888765 379999999999999999964 345788999887532110 0159999999
Q ss_pred CCC----------------CCccHHHHHHHHhCC--CCcEEE--Eee--CccchHhhHHHhhccCCCCccCCCeEEeE--
Q 043853 145 PNR----------------PGMHMKLIKFLLKLK--APRIVY--VSC--NPATCARDLDYLCHGVGDQNIKGCYKLKS-- 200 (222)
Q Consensus 145 pp~----------------~~~~~~~~~~l~~l~--~~~~v~--~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-- 200 (222)
||+ ..+..++++.+..++ |.-+++ +.+ +..++...++.|. +.||.+..
T Consensus 76 pPCq~fS~ag~~~g~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~l~~~~~~~~i~~~l~--------~~GY~v~~~v 147 (343)
T 1g55_A 76 PPCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIE--------NCGFQYQEFL 147 (343)
T ss_dssp CC------------------CHHHHHHHHGGGCSSCCSEEEEEEETTGGGSHHHHHHHHHHH--------HTTEEEEEEE
T ss_pred CCCcchhhcCCcCCccCccchHHHHHHHHHHHhcCCCCEEEEeCCccccCHHHHHHHHHHHH--------HCCCeeEEEE
Confidence 992 234456667777777 877777 333 2334444555554 56777665
Q ss_pred eeeecc-CCCCC
Q 043853 201 LQPVDM-FPHTP 211 (222)
Q Consensus 201 ~~~~~~-~p~~~ 211 (222)
+...++ .|++=
T Consensus 148 l~a~~~GvPQ~R 159 (343)
T 1g55_A 148 LSPTSLGIPNSR 159 (343)
T ss_dssp ECGGGGTCSCCC
T ss_pred EEHHHCCCCCcc
Confidence 444455 66554
No 266
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.84 E-value=1.8e-08 Score=85.15 Aligned_cols=82 Identities=20% Similarity=0.077 Sum_probs=68.9
Q ss_pred CCCCCeEEEEecccchhHHHHhhcCC--eEEEEeCCHHHHHHHHHHHHHcCC------CcEEEEeCchhchhhhcCCCCC
Q 043853 65 DDGSEIVLDLFCGTGTIGLTLARWVK--HVYGYEVVPQAISDACRNAKLNNI------SNATFVQGDLNKIGGDFGNAFP 136 (222)
Q Consensus 65 ~~~~~~vlDlg~G~G~~~~~la~~~~--~v~gvD~~~~~i~~a~~n~~~~~~------~~v~~~~~d~~~~~~~~~~~~~ 136 (222)
+.++.+|||++||.|+-+..++.... .++++|+|+.-++.+++|++..+. .++.+...|...+.... .+
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~---~~ 222 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELE---GD 222 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHS---TT
T ss_pred CCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhc---cc
Confidence 34589999999999999998887654 799999999999999999998765 35899999998876432 24
Q ss_pred CCcEEEECCCCCC
Q 043853 137 KPDIVISDPNRPG 149 (222)
Q Consensus 137 ~fD~ii~~pp~~~ 149 (222)
.||.|++|+|.++
T Consensus 223 ~fD~VLlDaPCSg 235 (359)
T 4fzv_A 223 TYDRVLVDVPCTT 235 (359)
T ss_dssp CEEEEEEECCCCC
T ss_pred cCCEEEECCccCC
Confidence 7999999999654
No 267
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.84 E-value=1.6e-09 Score=88.58 Aligned_cols=97 Identities=16% Similarity=0.167 Sum_probs=65.1
Q ss_pred CCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHH-HcCCC-cEEEE--eCchhchhhhcCCCCCCCcEEE
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAK-LNNIS-NATFV--QGDLNKIGGDFGNAFPKPDIVI 142 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~-~~~~~-~v~~~--~~d~~~~~~~~~~~~~~fD~ii 142 (222)
++.+|||+|||+|.++..+++. .+|+|+|+++ ++..++++.. ..... +++++ ++|+.+++ .+.||+|+
T Consensus 82 ~g~~VLDlGcGtG~~s~~la~~-~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~------~~~fD~Vv 153 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAASQ-PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME------PFQADTVL 153 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHHTS-TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC------CCCCSEEE
T ss_pred CCCEEEEeccCCCHHHHHHHHc-CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC------CCCcCEEE
Confidence 4789999999999999999887 7999999998 5433322110 00111 58899 99998854 24799999
Q ss_pred ECCCCCCcc-----H---HHHHHH-HhCCCCc--EEEEee
Q 043853 143 SDPNRPGMH-----M---KLIKFL-LKLKAPR--IVYVSC 171 (222)
Q Consensus 143 ~~pp~~~~~-----~---~~~~~l-~~l~~~~--~v~~~~ 171 (222)
++....... . .+++.+ +.++|+| .+++..
T Consensus 154 sd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~ 193 (276)
T 2wa2_A 154 CDIGESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKV 193 (276)
T ss_dssp ECCCCCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEE
T ss_pred ECCCcCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEe
Confidence 987511101 0 234444 3478888 666544
No 268
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.82 E-value=1.6e-09 Score=88.00 Aligned_cols=97 Identities=16% Similarity=0.183 Sum_probs=64.9
Q ss_pred CCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHH-cCCC-cEEEE--eCchhchhhhcCCCCCCCcEEE
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKL-NNIS-NATFV--QGDLNKIGGDFGNAFPKPDIVI 142 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~-~~~~-~v~~~--~~d~~~~~~~~~~~~~~fD~ii 142 (222)
++.+|||+|||+|.++..+++. .+|+|+|+++ ++..++++... .... +++++ ++|+.+++ ...||+|+
T Consensus 74 ~g~~VLDlGcGtG~~s~~la~~-~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~------~~~fD~V~ 145 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAASR-PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP------VERTDVIM 145 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHHTS-TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC------CCCCSEEE
T ss_pred CCCEEEEeCcCCCHHHHHHHHc-CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC------CCCCcEEE
Confidence 4789999999999999999887 8999999998 53333221000 0011 58888 99998754 14799999
Q ss_pred ECCCCC-Ccc----H---HHHHHH-HhCCCCc--EEEEee
Q 043853 143 SDPNRP-GMH----M---KLIKFL-LKLKAPR--IVYVSC 171 (222)
Q Consensus 143 ~~pp~~-~~~----~---~~~~~l-~~l~~~~--~v~~~~ 171 (222)
++.... +.. . .+++.+ +.++|+| .+++..
T Consensus 146 sd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv 185 (265)
T 2oxt_A 146 CDVGESSPKWSVESERTIKILELLEKWKVKNPSADFVVKV 185 (265)
T ss_dssp ECCCCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred EeCcccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEe
Confidence 987511 110 1 134444 3478999 776654
No 269
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.79 E-value=4.1e-08 Score=79.79 Aligned_cols=104 Identities=12% Similarity=0.001 Sum_probs=68.0
Q ss_pred CCeEEEEeccc--chhHHHHhhc---CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCC--CCCCc-
Q 043853 68 SEIVLDLFCGT--GTIGLTLARW---VKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNA--FPKPD- 139 (222)
Q Consensus 68 ~~~vlDlg~G~--G~~~~~la~~---~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~--~~~fD- 139 (222)
..+|||+|||+ +..+..+++. ..+|+++|.||.|++.|+.++...+..+++++++|+.+...-+..+ ...||
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D~ 158 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLDL 158 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCCT
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccCc
Confidence 46899999997 4455555442 3599999999999999999886544346999999998863211100 01233
Q ss_pred ----EEEECCC--C-CCc--cHHHHHHH-HhCCCCcEEEEee
Q 043853 140 ----IVISDPN--R-PGM--HMKLIKFL-LKLKAPRIVYVSC 171 (222)
Q Consensus 140 ----~ii~~pp--~-~~~--~~~~~~~l-~~l~~~~~v~~~~ 171 (222)
.|+++.- + ... ...++..+ ..++||+.+.++.
T Consensus 159 ~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~ 200 (277)
T 3giw_A 159 TRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSI 200 (277)
T ss_dssp TSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEE
T ss_pred CCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEe
Confidence 4666542 1 111 13455555 4489999988774
No 270
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.78 E-value=3.5e-09 Score=87.77 Aligned_cols=96 Identities=17% Similarity=0.115 Sum_probs=65.2
Q ss_pred CCCeEEEEecccchhHHHHhhcCCeEEEEeC----CHHHHHHHHHHHHHcCCCcEEEEeC-chhchhhhcCCCCCCCcEE
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVKHVYGYEV----VPQAISDACRNAKLNNISNATFVQG-DLNKIGGDFGNAFPKPDIV 141 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~----~~~~i~~a~~n~~~~~~~~v~~~~~-d~~~~~~~~~~~~~~fD~i 141 (222)
++.+|||+|||+|.++..+++. .+|+|+|+ ++.+++.+. ++..+.++++++++ |+.+++. ..||+|
T Consensus 82 ~g~~VLDlGcG~G~~s~~la~~-~~V~gvD~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~D~~~l~~------~~fD~V 152 (305)
T 2p41_A 82 PEGKVVDLGCGRGGWSYYCGGL-KNVREVKGLTKGGPGHEEPIP--MSTYGWNLVRLQSGVDVFFIPP------ERCDTL 152 (305)
T ss_dssp CCEEEEEETCTTSHHHHHHHTS-TTEEEEEEECCCSTTSCCCCC--CCSTTGGGEEEECSCCTTTSCC------CCCSEE
T ss_pred CCCEEEEEcCCCCHHHHHHHhc-CCEEEEeccccCchhHHHHHH--hhhcCCCCeEEEeccccccCCc------CCCCEE
Confidence 4789999999999999999987 68999999 554432211 11112246999999 8876532 479999
Q ss_pred EECCCCC-Ccc----H---HHHHHH-HhCCCCcEEEEee
Q 043853 142 ISDPNRP-GMH----M---KLIKFL-LKLKAPRIVYVSC 171 (222)
Q Consensus 142 i~~pp~~-~~~----~---~~~~~l-~~l~~~~~v~~~~ 171 (222)
+++.+.. +.. . .++..+ +.|+|+|.+.+..
T Consensus 153 ~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv 191 (305)
T 2p41_A 153 LCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKV 191 (305)
T ss_dssp EECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred EECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 9986532 111 1 233333 4589999877654
No 271
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.77 E-value=2.4e-08 Score=77.88 Aligned_cols=107 Identities=14% Similarity=0.105 Sum_probs=72.0
Q ss_pred CCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPN 146 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp 146 (222)
++.+|||+|||+|.++..++ .+++|+|+|+. ++++.++|+.+.+. +.+.||+|++...
T Consensus 67 ~~~~vLDiG~G~G~~~~~l~---~~v~~~D~s~~---------------~~~~~~~d~~~~~~----~~~~fD~v~~~~~ 124 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSIR---NPVHCFDLASL---------------DPRVTVCDMAQVPL----EDESVDVAVFCLS 124 (215)
T ss_dssp TTSCEEEETCTTCHHHHHCC---SCEEEEESSCS---------------STTEEESCTTSCSC----CTTCEEEEEEESC
T ss_pred CCCeEEEECCcCCHHHHHhh---ccEEEEeCCCC---------------CceEEEeccccCCC----CCCCEeEEEEehh
Confidence 46799999999999998774 68999999987 35688899877542 2247999998764
Q ss_pred CC-CccHHHHHHHH-hCCCCcEEEEeeCccc--hHhhHHHhhccCCCCccCCCeEEeEee
Q 043853 147 RP-GMHMKLIKFLL-KLKAPRIVYVSCNPAT--CARDLDYLCHGVGDQNIKGCYKLKSLQ 202 (222)
Q Consensus 147 ~~-~~~~~~~~~l~-~l~~~~~v~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~ 202 (222)
.. .-...+++.+. .++|+|.+++...... ...++..+.+ ..||++....
T Consensus 125 l~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~-------~~Gf~~~~~~ 177 (215)
T 2zfu_A 125 LMGTNIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVT-------KLGFKIVSKD 177 (215)
T ss_dssp CCSSCHHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHH-------HTTEEEEEEE
T ss_pred ccccCHHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHH-------HCCCEEEEEe
Confidence 21 22245555544 4789999887653321 2233443332 5678777643
No 272
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=98.76 E-value=6e-08 Score=82.58 Aligned_cols=95 Identities=23% Similarity=0.258 Sum_probs=72.2
Q ss_pred CeEEEEecccchhHHHHhhcCC-eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcC----CCCCCCcEEEE
Q 043853 69 EIVLDLFCGTGTIGLTLARWVK-HVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFG----NAFPKPDIVIS 143 (222)
Q Consensus 69 ~~vlDlg~G~G~~~~~la~~~~-~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~----~~~~~fD~ii~ 143 (222)
.+++|++||.|++++.+.+.+. .+.++|+++.+++..+.|. ++..++++|+.++..... .....+|+|+.
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~-----~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~g 77 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINF-----PRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIG 77 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHC-----TTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEE
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhC-----CCCceEecChhhcCHHHHHhhcccCCCeeEEEe
Confidence 4799999999999998877655 6779999999999999885 357888999988743211 01247999999
Q ss_pred CCCCCC---------------ccHHHHHHHHhCCCCcEEE
Q 043853 144 DPNRPG---------------MHMKLIKFLLKLKAPRIVY 168 (222)
Q Consensus 144 ~pp~~~---------------~~~~~~~~l~~l~~~~~v~ 168 (222)
+||+.+ +...+++.+..++|.-+++
T Consensus 78 gpPCQ~fS~ag~~~~~d~r~~L~~~~~~~v~~~~P~~~v~ 117 (376)
T 3g7u_A 78 GPPCQGFSSIGKGNPDDSRNQLYMHFYRLVSELQPLFFLA 117 (376)
T ss_dssp CCCCCTTC-------CHHHHHHHHHHHHHHHHHCCSEEEE
T ss_pred cCCCCCcccccCCCCCCchHHHHHHHHHHHHHhCCCEEEE
Confidence 999432 3455666777788887777
No 273
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.71 E-value=8.5e-08 Score=86.63 Aligned_cols=100 Identities=22% Similarity=0.257 Sum_probs=70.7
Q ss_pred CCeEEEEecccchhHH---HHhhc-C-----------CeEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhhhc
Q 043853 68 SEIVLDLFCGTGTIGL---TLARW-V-----------KHVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGDF 131 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~---~la~~-~-----------~~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~ 131 (222)
...|+|+|||+|.++. .+++. + .+|+|||.|+.++..++.... |+..+ |+++++|+.++....
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccccc
Confidence 4689999999999974 23321 1 299999999988877666554 77766 999999999986410
Q ss_pred -CCCCCCCcEEEECCCC----CCccHHHHHHHHh-CCCCcEEE
Q 043853 132 -GNAFPKPDIVISDPNR----PGMHMKLIKFLLK-LKAPRIVY 168 (222)
Q Consensus 132 -~~~~~~fD~ii~~pp~----~~~~~~~~~~l~~-l~~~~~v~ 168 (222)
....+++|+||+-.-- .++.++.++...+ |+|+|+++
T Consensus 489 ~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 489 KDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 0012589999998751 2244566665544 78888865
No 274
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.71 E-value=2e-08 Score=85.60 Aligned_cols=95 Identities=18% Similarity=0.186 Sum_probs=64.3
Q ss_pred CCCeEEEEecc------cchhHHHHhhc---CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhh--cCCCC
Q 043853 67 GSEIVLDLFCG------TGTIGLTLARW---VKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGD--FGNAF 135 (222)
Q Consensus 67 ~~~~vlDlg~G------~G~~~~~la~~---~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~--~~~~~ 135 (222)
+..+|||+||| +|+.++.+++. ..+|+|+|+|+.|. ...++++++++|+.+.+.. +....
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---------~~~~rI~fv~GDa~dlpf~~~l~~~d 286 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---------VDELRIRTIQGDQNDAEFLDRIARRY 286 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---------GCBTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---------hcCCCcEEEEecccccchhhhhhccc
Confidence 46799999999 78888877653 45999999999973 1235799999999886432 10001
Q ss_pred CCCcEEEECCCCC-CccHHHHHHH-HhCCCCcEEEEe
Q 043853 136 PKPDIVISDPNRP-GMHMKLIKFL-LKLKAPRIVYVS 170 (222)
Q Consensus 136 ~~fD~ii~~pp~~-~~~~~~~~~l-~~l~~~~~v~~~ 170 (222)
+.||+|+++-... .-....++.+ +.|+|+|+++++
T Consensus 287 ~sFDlVisdgsH~~~d~~~aL~el~rvLKPGGvlVi~ 323 (419)
T 3sso_A 287 GPFDIVIDDGSHINAHVRTSFAALFPHVRPGGLYVIE 323 (419)
T ss_dssp CCEEEEEECSCCCHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCccEEEECCcccchhHHHHHHHHHHhcCCCeEEEEE
Confidence 4799999975421 0012333333 347899988875
No 275
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.70 E-value=3.1e-08 Score=80.42 Aligned_cols=76 Identities=18% Similarity=0.254 Sum_probs=62.6
Q ss_pred CCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCC-CCCCCcEEEECC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGN-AFPKPDIVISDP 145 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~-~~~~fD~ii~~p 145 (222)
++..++|.+||.|+.+..+++...+++|+|.||.+++.|++ ++. ++++++++|..++...+.. ..+.+|.|++|+
T Consensus 22 ~gg~~VD~T~G~GGHS~~il~~~g~VigiD~Dp~Ai~~A~~-L~~---~rv~lv~~~f~~l~~~L~~~g~~~vDgIL~DL 97 (285)
T 1wg8_A 22 PGGVYVDATLGGAGHARGILERGGRVIGLDQDPEAVARAKG-LHL---PGLTVVQGNFRHLKRHLAALGVERVDGILADL 97 (285)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHH-TCC---TTEEEEESCGGGHHHHHHHTTCSCEEEEEEEC
T ss_pred CCCEEEEeCCCCcHHHHHHHHCCCEEEEEeCCHHHHHHHHh-hcc---CCEEEEECCcchHHHHHHHcCCCCcCEEEeCC
Confidence 47899999999999999998876799999999999999998 543 4799999999887543221 124799999987
Q ss_pred C
Q 043853 146 N 146 (222)
Q Consensus 146 p 146 (222)
.
T Consensus 98 G 98 (285)
T 1wg8_A 98 G 98 (285)
T ss_dssp S
T ss_pred c
Confidence 5
No 276
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.70 E-value=3.7e-08 Score=80.91 Aligned_cols=86 Identities=26% Similarity=0.322 Sum_probs=59.1
Q ss_pred CCCCeEEEEeccc------chhHHHHhhc---CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEE-EeCchhchhhhcCCCC
Q 043853 66 DGSEIVLDLFCGT------GTIGLTLARW---VKHVYGYEVVPQAISDACRNAKLNNISNATF-VQGDLNKIGGDFGNAF 135 (222)
Q Consensus 66 ~~~~~vlDlg~G~------G~~~~~la~~---~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~-~~~d~~~~~~~~~~~~ 135 (222)
.++.+|||+|||+ |. ..+++. ..+|+|+|+++. ++++++ +++|+.+....
T Consensus 62 ~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v~~v~~~i~gD~~~~~~~----- 121 (290)
T 2xyq_A 62 PYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------VSDADSTLIGDCATVHTA----- 121 (290)
T ss_dssp CTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------BCSSSEEEESCGGGCCCS-----
T ss_pred CCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------CCCCEEEEECccccCCcc-----
Confidence 3578999999955 66 333332 359999999987 135788 99999876432
Q ss_pred CCCcEEEECCCCC-------------CccHHHHHHH-HhCCCCcEEEEee
Q 043853 136 PKPDIVISDPNRP-------------GMHMKLIKFL-LKLKAPRIVYVSC 171 (222)
Q Consensus 136 ~~fD~ii~~pp~~-------------~~~~~~~~~l-~~l~~~~~v~~~~ 171 (222)
+.||+|++|++.. .+...+++.+ +.|+|+|.+++..
T Consensus 122 ~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~ 171 (290)
T 2xyq_A 122 NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKI 171 (290)
T ss_dssp SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 4799999986421 1123445544 3489999988755
No 277
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.69 E-value=3.7e-07 Score=73.75 Aligned_cols=107 Identities=17% Similarity=0.096 Sum_probs=72.3
Q ss_pred CCCeEEEEecccchhHHHHhhc-------C-------CeEEEEeCCH---HHHH-----------HHHHHHHH-------
Q 043853 67 GSEIVLDLFCGTGTIGLTLARW-------V-------KHVYGYEVVP---QAIS-----------DACRNAKL------- 111 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~-------~-------~~v~gvD~~~---~~i~-----------~a~~n~~~------- 111 (222)
+..+|||+|+|+|..++.+++. . .+++++|..| +.+. .|+.+++.
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 4579999999999998875432 2 2899999887 4443 66776654
Q ss_pred -----c--CCCcEEEEeCchhchhhhcCCC-CCCCcEEEECC--CCCC---ccHHHHHHHHh-CCCCcEEEEeeCc
Q 043853 112 -----N--NISNATFVQGDLNKIGGDFGNA-FPKPDIVISDP--NRPG---MHMKLIKFLLK-LKAPRIVYVSCNP 173 (222)
Q Consensus 112 -----~--~~~~v~~~~~d~~~~~~~~~~~-~~~fD~ii~~p--p~~~---~~~~~~~~l~~-l~~~~~v~~~~~~ 173 (222)
. +..+++++.+|+.+....+... ...||+|+.|+ |... ....+++.+.+ ++|+|++..-+..
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tysaa 215 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTSA 215 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEESCCB
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEEEeCC
Confidence 1 2235889999999876554210 12799999997 4322 24566666655 7898887754433
No 278
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.67 E-value=1.2e-07 Score=85.30 Aligned_cols=94 Identities=18% Similarity=0.191 Sum_probs=68.4
Q ss_pred CCeEEEEecccchhHH---HHhhc-CC--eEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhhhcCCCCCCCcE
Q 043853 68 SEIVLDLFCGTGTIGL---TLARW-VK--HVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGDFGNAFPKPDI 140 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~---~la~~-~~--~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~~~~~~~fD~ 140 (222)
...|+|+|||+|.+.. .+++. +. +|+|||.|| +...|++..+.|+..+ |+++++|++++... +++|+
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~LP-----EKVDI 431 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWVAP-----EKADI 431 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCCCS-----SCEEE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceeccCC-----cccCE
Confidence 4689999999999844 33332 33 789999997 5667888999999876 99999999997542 58999
Q ss_pred EEECCC-----CCCccHHHHHHHHh-CCCCcEEE
Q 043853 141 VISDPN-----RPGMHMKLIKFLLK-LKAPRIVY 168 (222)
Q Consensus 141 ii~~pp-----~~~~~~~~~~~l~~-l~~~~~v~ 168 (222)
||+-+= ...+ ..++....+ |+|+|+++
T Consensus 432 IVSEwMG~fLl~E~m-levL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 432 IVSELLGSFADNELS-PECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp EECCCCBTTBGGGCH-HHHHHHHGGGEEEEEEEE
T ss_pred EEEEcCcccccccCC-HHHHHHHHHhcCCCcEEc
Confidence 999763 2222 344444433 67887765
No 279
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.66 E-value=1.8e-07 Score=78.98 Aligned_cols=98 Identities=16% Similarity=0.181 Sum_probs=69.9
Q ss_pred CCCeEEEEecccchhHHHHhhcCC--eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEEC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVK--HVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISD 144 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~--~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~ 144 (222)
+..+|+|+|||+|.++..+++..+ +++..|. |.+++.|++++...+.++++++.+|+.+.+. ..+|++++.
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~------~~~D~~~~~ 251 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPL------PEADLYILA 251 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCC------CCCSEEEEE
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCC------CCceEEEee
Confidence 467999999999999999998876 6777786 8999999998876666679999999976422 357998775
Q ss_pred CC---CCC-ccHHHHHHHH-hCCCCcEEEEee
Q 043853 145 PN---RPG-MHMKLIKFLL-KLKAPRIVYVSC 171 (222)
Q Consensus 145 pp---~~~-~~~~~~~~l~-~l~~~~~v~~~~ 171 (222)
-- +.+ ....+++.+. .++|+|.+++..
T Consensus 252 ~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e 283 (353)
T 4a6d_A 252 RVLHDWADGKCSHLLERIYHTCKPGGGILVIE 283 (353)
T ss_dssp SSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred eecccCCHHHHHHHHHHHHhhCCCCCEEEEEE
Confidence 42 111 0123444443 388988776544
No 280
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.65 E-value=2.6e-07 Score=77.69 Aligned_cols=95 Identities=15% Similarity=0.126 Sum_probs=64.8
Q ss_pred CCCeEEEEecccchhHHHHhhcCC--eEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEeCchhchhhhcCCCCCCCcEEEE
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVK--HVYGYEVVPQAISDACRNAKLNNIS-NATFVQGDLNKIGGDFGNAFPKPDIVIS 143 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~--~v~gvD~~~~~i~~a~~n~~~~~~~-~v~~~~~d~~~~~~~~~~~~~~fD~ii~ 143 (222)
+..+|||+|||+|.++..+++..+ +++++|+ +.++. +++++..+.. +++++.+|+.+.. + .||+|++
T Consensus 184 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~~~-----p--~~D~v~~ 253 (348)
T 3lst_A 184 ATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLREV-----P--HADVHVL 253 (348)
T ss_dssp SSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTTCC-----C--CCSEEEE
T ss_pred CCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCCCC-----C--CCcEEEE
Confidence 478999999999999999988654 7899999 45555 3333333333 5999999996321 1 6999988
Q ss_pred CCCCCCc-c---HHHHHHHHh-CCCCcEEEEee
Q 043853 144 DPNRPGM-H---MKLIKFLLK-LKAPRIVYVSC 171 (222)
Q Consensus 144 ~pp~~~~-~---~~~~~~l~~-l~~~~~v~~~~ 171 (222)
...-... . ..+++.+.+ ++|+|.+++..
T Consensus 254 ~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e 286 (348)
T 3lst_A 254 KRILHNWGDEDSVRILTNCRRVMPAHGRVLVID 286 (348)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEE
T ss_pred ehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 6531111 1 345555544 89999887654
No 281
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.59 E-value=3.6e-07 Score=74.88 Aligned_cols=102 Identities=16% Similarity=0.070 Sum_probs=79.5
Q ss_pred CCCeEEEEecccchhHHHHhhc--CCeEEEEeCCHHHHHHHHHHHHHc-----CCCcEEEEeCchhchhhhcCCCCCCCc
Q 043853 67 GSEIVLDLFCGTGTIGLTLARW--VKHVYGYEVVPQAISDACRNAKLN-----NISNATFVQGDLNKIGGDFGNAFPKPD 139 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~--~~~v~gvD~~~~~i~~a~~n~~~~-----~~~~v~~~~~d~~~~~~~~~~~~~~fD 139 (222)
+.++||=+|.|.|+.+..+.+. ..+++.+|+++..++.+++.+... .-++++++.+|+.++... ..++||
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~---~~~~yD 159 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ---TSQTFD 159 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSC---SSCCEE
T ss_pred CCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhh---ccccCC
Confidence 4689999999999999988875 359999999999999999987542 234699999999998754 235899
Q ss_pred EEEECCCC------CCccHHHHHHHHh-CCCCcEEEEee
Q 043853 140 IVISDPNR------PGMHMKLIKFLLK-LKAPRIVYVSC 171 (222)
Q Consensus 140 ~ii~~pp~------~~~~~~~~~~l~~-l~~~~~v~~~~ 171 (222)
+|+.|.+. .-...++.+.+++ |+|+|++...+
T Consensus 160 vIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 160 VIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEec
Confidence 99999752 1133566666654 89999887654
No 282
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.57 E-value=1e-07 Score=80.19 Aligned_cols=91 Identities=21% Similarity=0.247 Sum_probs=66.0
Q ss_pred CCCeEEEEecccchhHHHHhhcC--CeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEEC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWV--KHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISD 144 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~--~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~ 144 (222)
+..+|||+|||+|.++..+++.. .+++++|+ +.+++.|++ .++++++.+|+.+ .. ..||+|++.
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~------p~~D~v~~~ 253 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG------SNNLTYVGGDMFT-SI------PNADAVLLK 253 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------BTTEEEEECCTTT-CC------CCCSEEEEE
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc------CCCcEEEeccccC-CC------CCccEEEee
Confidence 46799999999999999998764 38999999 999998875 2459999999976 21 149999886
Q ss_pred CCCCCc--cH--HHHHHHHh-CCC---CcEEEEee
Q 043853 145 PNRPGM--HM--KLIKFLLK-LKA---PRIVYVSC 171 (222)
Q Consensus 145 pp~~~~--~~--~~~~~l~~-l~~---~~~v~~~~ 171 (222)
-.-... .. .+++.+.+ ++| +|.+++..
T Consensus 254 ~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 254 YILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred hhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 531111 11 44444433 788 88876654
No 283
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.55 E-value=2.7e-07 Score=78.22 Aligned_cols=91 Identities=22% Similarity=0.257 Sum_probs=65.3
Q ss_pred CCCeEEEEecccchhHHHHhhcCC--eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEEC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVK--HVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISD 144 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~--~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~ 144 (222)
+..+|||+|||+|.++..+++..+ +++++|+ |.+++.|+++ ++++++.+|+.+ +. . .. |+|++.
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~~v~~~~~d~~~-~~--p---~~-D~v~~~ 268 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF------SGVEHLGGDMFD-GV--P---KG-DAIFIK 268 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC------TTEEEEECCTTT-CC--C---CC-SEEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc------CCCEEEecCCCC-CC--C---CC-CEEEEe
Confidence 468999999999999999988654 8999999 9999887642 469999999976 22 1 12 999886
Q ss_pred CCCCCcc----HHHHHHHH-hCCCCcEEEEee
Q 043853 145 PNRPGMH----MKLIKFLL-KLKAPRIVYVSC 171 (222)
Q Consensus 145 pp~~~~~----~~~~~~l~-~l~~~~~v~~~~ 171 (222)
-.-.... ..+++.+. .++|+|.+++..
T Consensus 269 ~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 300 (368)
T 3reo_A 269 WICHDWSDEHCLKLLKNCYAALPDHGKVIVAE 300 (368)
T ss_dssp SCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred chhhcCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 5311111 23444443 489999877644
No 284
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.54 E-value=2e-07 Score=79.09 Aligned_cols=90 Identities=20% Similarity=0.224 Sum_probs=66.0
Q ss_pred CCCeEEEEecccchhHHHHhhcCC--eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEEC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVK--HVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISD 144 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~--~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~ 144 (222)
+..+|||+|||+|.++..+++..+ +++++|+ +.+++.|++ .++++++.+|+.+ +. ..||+|++.
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~------~~~D~v~~~ 274 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP------LSGIEHVGGDMFA-SV------PQGDAMILK 274 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------CTTEEEEECCTTT-CC------CCEEEEEEE
T ss_pred CCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh------cCCCEEEeCCccc-CC------CCCCEEEEe
Confidence 468999999999999999988754 7888899 999988875 2469999999976 22 138999986
Q ss_pred CCCCCc--cH--HHHHHHHh-CCCCcEEEEe
Q 043853 145 PNRPGM--HM--KLIKFLLK-LKAPRIVYVS 170 (222)
Q Consensus 145 pp~~~~--~~--~~~~~l~~-l~~~~~v~~~ 170 (222)
-.-... .. .+++.+.+ ++|+|.+++.
T Consensus 275 ~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~ 305 (372)
T 1fp1_D 275 AVCHNWSDEKCIEFLSNCHKALSPNGKVIIV 305 (372)
T ss_dssp SSGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccccCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 531111 11 44454443 7899887765
No 285
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.53 E-value=2e-07 Score=76.76 Aligned_cols=58 Identities=29% Similarity=0.358 Sum_probs=48.0
Q ss_pred HHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHc
Q 043853 52 VLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLN 112 (222)
Q Consensus 52 ~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~ 112 (222)
.+++.+..... .++..|||+|||+|..++++++.+.+++|+|+++.+++.|+++++..
T Consensus 223 ~l~~~~i~~~~---~~~~~vlD~f~GsGt~~~~a~~~g~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 223 ELAERLVRMFS---FVGDVVLDPFAGTGTTLIAAARWGRRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp HHHHHHHHHHC---CTTCEEEETTCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC---CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHh
Confidence 34444444433 34789999999999999999998999999999999999999999764
No 286
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.51 E-value=3.5e-07 Score=77.47 Aligned_cols=91 Identities=22% Similarity=0.207 Sum_probs=65.2
Q ss_pred CCCeEEEEecccchhHHHHhhcCC--eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEEC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVK--HVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISD 144 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~--~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~ 144 (222)
+..+|||+|||+|.++..+++..+ +++++|+ |.+++.|++. ++++++.+|+.+ +.. .. |+|++.
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~~v~~~~~D~~~-~~p-----~~-D~v~~~ 266 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF------PGVTHVGGDMFK-EVP-----SG-DTILMK 266 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC------TTEEEEECCTTT-CCC-----CC-SEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc------CCeEEEeCCcCC-CCC-----CC-CEEEeh
Confidence 468999999999999999988654 8999999 8998887642 469999999987 321 12 999885
Q ss_pred CCCCCc----cHHHHHHHH-hCCCCcEEEEee
Q 043853 145 PNRPGM----HMKLIKFLL-KLKAPRIVYVSC 171 (222)
Q Consensus 145 pp~~~~----~~~~~~~l~-~l~~~~~v~~~~ 171 (222)
-..... ...+++.+. .++|+|.+++..
T Consensus 267 ~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e 298 (364)
T 3p9c_A 267 WILHDWSDQHCATLLKNCYDALPAHGKVVLVQ 298 (364)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred HHhccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 431111 123444443 389999887644
No 287
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.50 E-value=2e-07 Score=78.61 Aligned_cols=91 Identities=22% Similarity=0.264 Sum_probs=65.7
Q ss_pred CCCeEEEEecccchhHHHHhhcCC--eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEEC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVK--HVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISD 144 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~--~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~ 144 (222)
+..+|||+|||+|.++..+++..+ +++++|+ +.+++.|++ .++++++.+|+.+ +. ..||+|++.
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~------~~~D~v~~~ 258 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG------NENLNFVGGDMFK-SI------PSADAVLLK 258 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC------CSSEEEEECCTTT-CC------CCCSEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc------CCCcEEEeCccCC-CC------CCceEEEEc
Confidence 357999999999999999988754 8999999 789887764 3469999999976 22 259999987
Q ss_pred CCCCCcc----HHHHHHHHh-CCC---CcEEEEee
Q 043853 145 PNRPGMH----MKLIKFLLK-LKA---PRIVYVSC 171 (222)
Q Consensus 145 pp~~~~~----~~~~~~l~~-l~~---~~~v~~~~ 171 (222)
-...... ..+++.+.+ ++| +|.+++..
T Consensus 259 ~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e 293 (358)
T 1zg3_A 259 WVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIID 293 (358)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEE
T ss_pred ccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 5411111 144444433 788 88776543
No 288
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.49 E-value=7.8e-07 Score=72.66 Aligned_cols=102 Identities=11% Similarity=0.036 Sum_probs=74.4
Q ss_pred CCeEEEEecccchhHHHHhhc-------CCeEEEEeCCH--------------------------HHHHHHHHHHHHcCC
Q 043853 68 SEIVLDLFCGTGTIGLTLARW-------VKHVYGYEVVP--------------------------QAISDACRNAKLNNI 114 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~-------~~~v~gvD~~~--------------------------~~i~~a~~n~~~~~~ 114 (222)
...|||+|+..|+.++.++.. ..+++++|... ..++.+++|++..|+
T Consensus 107 pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~gl 186 (282)
T 2wk1_A 107 PGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYDL 186 (282)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTTC
T ss_pred CCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcCC
Confidence 469999999999999877642 45899999631 147889999999998
Q ss_pred --CcEEEEeCchhchhhhcCCCCCCCcEEEECCCCCCccHHHHHHH-HhCCCCcEEEEee
Q 043853 115 --SNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFL-LKLKAPRIVYVSC 171 (222)
Q Consensus 115 --~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~~~~~~~~~~l-~~l~~~~~v~~~~ 171 (222)
++++++.||+.+....+. ..+||+|++|-.........++.+ ..+.+||+++++-
T Consensus 187 ~~~~I~li~Gda~etL~~~~--~~~~d~vfIDaD~y~~~~~~Le~~~p~L~pGGiIv~DD 244 (282)
T 2wk1_A 187 LDEQVRFLPGWFKDTLPTAP--IDTLAVLRMDGDLYESTWDTLTNLYPKVSVGGYVIVDD 244 (282)
T ss_dssp CSTTEEEEESCHHHHSTTCC--CCCEEEEEECCCSHHHHHHHHHHHGGGEEEEEEEEESS
T ss_pred CcCceEEEEeCHHHHHhhCC--CCCEEEEEEcCCccccHHHHHHHHHhhcCCCEEEEEcC
Confidence 469999999988776543 247999999974211112334443 3378889887654
No 289
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=98.46 E-value=1e-06 Score=73.54 Aligned_cols=92 Identities=21% Similarity=0.231 Sum_probs=70.8
Q ss_pred CCeEEEEecccchhHHHHhhcCC-eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCC
Q 043853 68 SEIVLDLFCGTGTIGLTLARWVK-HVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPN 146 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~~~-~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp 146 (222)
..+++|++||+|++++.+...+. .+.++|+++.+++..+.|.... . ++|+.++..... ..+|+++.+||
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~-----~--~~Di~~~~~~~~---~~~D~l~~gpP 80 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEK-----P--EGDITQVNEKTI---PDHDILCAGFP 80 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCC-----C--BSCGGGSCGGGS---CCCSEEEEECC
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCC-----C--cCCHHHcCHhhC---CCCCEEEECCC
Confidence 46899999999999998876544 7889999999999999997421 1 689888765422 36999999998
Q ss_pred ----------------CCCccHHHHHHHHhCCCCcEEEE
Q 043853 147 ----------------RPGMHMKLIKFLLKLKAPRIVYV 169 (222)
Q Consensus 147 ----------------~~~~~~~~~~~l~~l~~~~~v~~ 169 (222)
+..+...+++.+..++|.-+++-
T Consensus 81 CQ~fS~ag~~~g~~d~r~~L~~~~~r~i~~~~P~~~~~E 119 (327)
T 2c7p_A 81 CQAFSISGKQKGFEDSRGTLFFDIARIVREKKPKVVFME 119 (327)
T ss_dssp CTTTCTTSCCCGGGSTTSCHHHHHHHHHHHHCCSEEEEE
T ss_pred CCCcchhcccCCCcchhhHHHHHHHHHHHhccCcEEEEe
Confidence 22355677777877888766653
No 290
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=98.41 E-value=4e-07 Score=73.57 Aligned_cols=49 Identities=20% Similarity=0.355 Sum_probs=43.1
Q ss_pred CCCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCC
Q 043853 66 DGSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNI 114 (222)
Q Consensus 66 ~~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~ 114 (222)
.++..|||++||+|+.++++++.+.+++|+|+++.+++.|+++++.+++
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~gr~~ig~e~~~~~~~~~~~r~~~~~~ 259 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAEYVNQANFVLNQLEI 259 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC---
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhccC
Confidence 3578999999999999999998899999999999999999999986654
No 291
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=98.38 E-value=4.1e-06 Score=69.73 Aligned_cols=92 Identities=24% Similarity=0.288 Sum_probs=71.2
Q ss_pred CeEEEEecccchhHHHHhhcCC-eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCC-
Q 043853 69 EIVLDLFCGTGTIGLTLARWVK-HVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPN- 146 (222)
Q Consensus 69 ~~vlDlg~G~G~~~~~la~~~~-~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp- 146 (222)
.+|||++||.|++++.+.+.+- -+.++|+++.+++..+.|.. -+++.+|+.++..... ...|+++..||
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~------~~~~~~DI~~i~~~~~---~~~D~l~ggpPC 71 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHS------AKLIKGDISKISSDEF---PKCDGIIGGPPS 71 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCC------SEEEESCGGGCCGGGS---CCCSEEECCCCG
T ss_pred CeEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCC------CCcccCChhhCCHhhC---CcccEEEecCCC
Confidence 3799999999999998877554 67799999999999888852 3678899988765422 47999999998
Q ss_pred ---------------CCCccHHHHHHHHhCCCCcEEEE
Q 043853 147 ---------------RPGMHMKLIKFLLKLKAPRIVYV 169 (222)
Q Consensus 147 ---------------~~~~~~~~~~~l~~l~~~~~v~~ 169 (222)
+..+...+++.+..++|.-+++-
T Consensus 72 Q~fS~ag~~~g~~d~R~~L~~~~~r~i~~~~Pk~~~~E 109 (331)
T 3ubt_Y 72 QSWSEGGSLRGIDDPRGKLFYEYIRILKQKKPIFFLAE 109 (331)
T ss_dssp GGTEETTEECCTTCGGGHHHHHHHHHHHHHCCSEEEEE
T ss_pred CCcCCCCCccCCCCchhHHHHHHHHHHhccCCeEEEee
Confidence 22345667777777888776663
No 292
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=98.27 E-value=4.2e-06 Score=68.82 Aligned_cols=93 Identities=18% Similarity=0.186 Sum_probs=68.8
Q ss_pred CCCeEEEEecccchhHHHHhhcCCe---EEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEE
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVKH---VYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVIS 143 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~~---v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~ 143 (222)
...+++|++||.|++++.+.+.+.+ +.++|+++.+++..+.|.. +..++.+|+.++..........+|+++.
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~-----~~~~~~~DI~~i~~~~i~~~~~~Dll~g 89 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQ-----GKIMYVGDVRSVTQKHIQEWGPFDLVIG 89 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTT-----TCEEEECCGGGCCHHHHHHTCCCSEEEE
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCC-----CCceeCCChHHccHHHhcccCCcCEEEe
Confidence 4668999999999999988776543 6999999999998888752 4568889998875431111136999999
Q ss_pred CCCC-----------------CCccHHHHHHHHhCCCC
Q 043853 144 DPNR-----------------PGMHMKLIKFLLKLKAP 164 (222)
Q Consensus 144 ~pp~-----------------~~~~~~~~~~l~~l~~~ 164 (222)
.||. ..+..++++.+..++|.
T Consensus 90 gpPCQ~fS~ag~~r~g~~d~r~~L~~~~~rii~~~~P~ 127 (295)
T 2qrv_A 90 GSPCNDLSIVNPARKGLYEGTGRLFFEFYRLLHDARPK 127 (295)
T ss_dssp CCCCGGGBTTCTTCCTTTSTTTTHHHHHHHHHHHHSCC
T ss_pred cCCCccccccCccccccccccchhHHHHHHHHHHhCcc
Confidence 9981 23445667777777776
No 293
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.25 E-value=3e-06 Score=71.64 Aligned_cols=106 Identities=17% Similarity=0.089 Sum_probs=75.7
Q ss_pred CCCeEEEEecccchhHHHHhhc-CCeEEEEeCCHHHHHHHHHHHHHc-----CC---CcEEEEeCchhchhhhcCCCCCC
Q 043853 67 GSEIVLDLFCGTGTIGLTLARW-VKHVYGYEVVPQAISDACRNAKLN-----NI---SNATFVQGDLNKIGGDFGNAFPK 137 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~-~~~v~gvD~~~~~i~~a~~n~~~~-----~~---~~v~~~~~d~~~~~~~~~~~~~~ 137 (222)
+.++||=+|.|.|+.+..+.+. ..+++.+|++|..++.|++.+... .. ++++++.+|+.++........++
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~ 284 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 284 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCc
Confidence 4689999999999999987764 358999999999999999875321 11 24899999999887543222357
Q ss_pred CcEEEECCCC---C----Cc-----cHHHHHHHH-hCCCCcEEEEeeC
Q 043853 138 PDIVISDPNR---P----GM-----HMKLIKFLL-KLKAPRIVYVSCN 172 (222)
Q Consensus 138 fD~ii~~pp~---~----~~-----~~~~~~~l~-~l~~~~~v~~~~~ 172 (222)
||+|+.|.+. . +. ..++.+.++ .|+++|++...++
T Consensus 285 yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~ 332 (381)
T 3c6k_A 285 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 332 (381)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred eeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecC
Confidence 9999998531 1 11 134444444 3889998876554
No 294
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=98.22 E-value=5.7e-06 Score=69.18 Aligned_cols=94 Identities=17% Similarity=0.214 Sum_probs=70.7
Q ss_pred CeEEEEecccchhHHHHhhcC---CeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECC
Q 043853 69 EIVLDLFCGTGTIGLTLARWV---KHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDP 145 (222)
Q Consensus 69 ~~vlDlg~G~G~~~~~la~~~---~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~p 145 (222)
-+++|++||.|++++.+.+.+ .-+.++|+++.+++..+.|.. +..++.+|+.++....... ..+|+++..|
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~-----~~~~~~~DI~~~~~~~~~~-~~~D~l~ggp 77 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP-----ETNLLNRNIQQLTPQVIKK-WNVDTILMSP 77 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT-----TSCEECCCGGGCCHHHHHH-TTCCEEEECC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC-----CCceeccccccCCHHHhcc-CCCCEEEecC
Confidence 479999999999999887755 358899999999999988863 3457788988775421110 2699999999
Q ss_pred C----------------CCCccHHHHHHHHhCC-CCcEEE
Q 043853 146 N----------------RPGMHMKLIKFLLKLK-APRIVY 168 (222)
Q Consensus 146 p----------------~~~~~~~~~~~l~~l~-~~~~v~ 168 (222)
| +..+...+++.+..++ |.-+++
T Consensus 78 PCQ~fS~ag~~~~~~d~r~~L~~~~~r~i~~~~~P~~~vl 117 (333)
T 4h0n_A 78 PCQPFTRNGKYLDDNDPRTNSFLYLIGILDQLDNVDYILM 117 (333)
T ss_dssp CCCCSEETTEECCTTCTTSCCHHHHHHHGGGCTTCCEEEE
T ss_pred CCcchhhhhhccCCcCcccccHHHHHHHHHHhcCCCEEEE
Confidence 8 2345667888887786 766555
No 295
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=98.20 E-value=9.1e-06 Score=68.38 Aligned_cols=73 Identities=18% Similarity=0.057 Sum_probs=56.6
Q ss_pred HHHHHHHHhcCCCC----CCCeEEEEecccchhHHHHhhc--CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhc
Q 043853 53 LYKLIEDCAGLRDD----GSEIVLDLFCGTGTIGLTLARW--VKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNK 126 (222)
Q Consensus 53 ~~~~i~~~~~~~~~----~~~~vlDlg~G~G~~~~~la~~--~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~ 126 (222)
+++.|.+.++.... ++..|||+|.|.|.+|..|++. ..+++++|+|+..+...++.. . .++++++++|+.+
T Consensus 40 i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~--~~~l~ii~~D~l~ 116 (353)
T 1i4w_A 40 VYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E--GSPLQILKRDPYD 116 (353)
T ss_dssp HHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T--TSSCEEECSCTTC
T ss_pred HHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c--CCCEEEEECCccc
Confidence 34445555443321 3589999999999999999875 569999999999999998876 2 3579999999977
Q ss_pred hh
Q 043853 127 IG 128 (222)
Q Consensus 127 ~~ 128 (222)
+.
T Consensus 117 ~~ 118 (353)
T 1i4w_A 117 WS 118 (353)
T ss_dssp HH
T ss_pred hh
Confidence 64
No 296
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.12 E-value=1.7e-06 Score=65.23 Aligned_cols=85 Identities=7% Similarity=0.051 Sum_probs=61.4
Q ss_pred CCCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECC
Q 043853 66 DGSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDP 145 (222)
Q Consensus 66 ~~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~p 145 (222)
.++.+|||+|||. +++|+|+.|++.|+++... ++++.++|+.+++... -+.+.||+|++.-
T Consensus 11 ~~g~~vL~~~~g~--------------v~vD~s~~ml~~a~~~~~~----~~~~~~~d~~~~~~~~-~~~~~fD~V~~~~ 71 (176)
T 2ld4_A 11 SAGQFVAVVWDKS--------------SPVEALKGLVDKLQALTGN----EGRVSVENIKQLLQSA-HKESSFDIILSGL 71 (176)
T ss_dssp CTTSEEEEEECTT--------------SCHHHHHHHHHHHHHHTTT----TSEEEEEEGGGGGGGC-CCSSCEEEEEECC
T ss_pred CCCCEEEEecCCc--------------eeeeCCHHHHHHHHHhccc----CcEEEEechhcCcccc-CCCCCEeEEEECC
Confidence 4589999999996 2399999999999988642 4889999998875410 0125799999964
Q ss_pred C--C--CCccHHHHHHHH-hCCCCcEEEEe
Q 043853 146 N--R--PGMHMKLIKFLL-KLKAPRIVYVS 170 (222)
Q Consensus 146 p--~--~~~~~~~~~~l~-~l~~~~~v~~~ 170 (222)
. . ... ..+++.+. .++|+|.+++.
T Consensus 72 ~l~~~~~~~-~~~l~~~~r~LkpgG~l~~~ 100 (176)
T 2ld4_A 72 VPGSTTLHS-AEILAEIARILRPGGCLFLK 100 (176)
T ss_dssp STTCCCCCC-HHHHHHHHHHEEEEEEEEEE
T ss_pred hhhhcccCH-HHHHHHHHHHCCCCEEEEEE
Confidence 3 1 233 55555554 48999998874
No 297
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.12 E-value=5.5e-06 Score=69.81 Aligned_cols=92 Identities=14% Similarity=0.138 Sum_probs=63.8
Q ss_pred CCCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECC
Q 043853 66 DGSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDP 145 (222)
Q Consensus 66 ~~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~p 145 (222)
.+++++||+||..|+++..+++.+..|+|||..+-. ... ...++|+++++|+.++... ..++|+|++|.
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~l~-~~l------~~~~~V~~~~~d~~~~~~~----~~~~D~vvsDm 278 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGPMA-QSL------MDTGQVTWLREDGFKFRPT----RSNISWMVCDM 278 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCEEEEECSSCCC-HHH------HTTTCEEEECSCTTTCCCC----SSCEEEEEECC
T ss_pred CCCCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhhcC-hhh------ccCCCeEEEeCccccccCC----CCCcCEEEEcC
Confidence 358999999999999999999888899999986421 111 1235799999999886542 24799999997
Q ss_pred CCC--CccHHHHHHHHhCCCCcEEE
Q 043853 146 NRP--GMHMKLIKFLLKLKAPRIVY 168 (222)
Q Consensus 146 p~~--~~~~~~~~~l~~l~~~~~v~ 168 (222)
... +....+.+.+.....++.++
T Consensus 279 ~~~p~~~~~l~~~wl~~~~~~~aI~ 303 (375)
T 4auk_A 279 VEKPAKVAALMAQWLVNGWCRETIF 303 (375)
T ss_dssp SSCHHHHHHHHHHHHHTTSCSEEEE
T ss_pred CCChHHhHHHHHHHHhccccceEEE
Confidence 422 22233333444444455555
No 298
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=98.02 E-value=1.4e-05 Score=66.58 Aligned_cols=76 Identities=14% Similarity=0.115 Sum_probs=57.7
Q ss_pred CCeEEEEecccchhHHHHhhcC---CeE-EEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEE
Q 043853 68 SEIVLDLFCGTGTIGLTLARWV---KHV-YGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVIS 143 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~~---~~v-~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~ 143 (222)
.-+++|++||.|++++.+.+.+ ..+ .++|+++.+++..+.|... . ++++|+.++....... ..+|+++.
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~-----~-~~~~DI~~~~~~~i~~-~~~Dil~g 82 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE-----E-VQVKNLDSISIKQIES-LNCNTWFM 82 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC-----C-CBCCCTTTCCHHHHHH-TCCCEEEE
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC-----C-cccCChhhcCHHHhcc-CCCCEEEe
Confidence 4589999999999999888765 456 7999999999999999742 2 5678887764321100 26899999
Q ss_pred CCCCCCc
Q 043853 144 DPNRPGM 150 (222)
Q Consensus 144 ~pp~~~~ 150 (222)
.||..+.
T Consensus 83 gpPCQ~f 89 (327)
T 3qv2_A 83 SPPCQPY 89 (327)
T ss_dssp CCCCTTC
T ss_pred cCCccCc
Confidence 9995554
No 299
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.89 E-value=2.5e-05 Score=64.90 Aligned_cols=83 Identities=18% Similarity=0.189 Sum_probs=61.7
Q ss_pred HHHHhcCCCCCCCeEEEEecccchhHHHHhhc-C--CeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCC
Q 043853 57 IEDCAGLRDDGSEIVLDLFCGTGTIGLTLARW-V--KHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGN 133 (222)
Q Consensus 57 i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~-~--~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~ 133 (222)
+.+.+... ++..++|..||.|+.+..+++. + .+++|+|.+|.+++.|+ ++ ..+++++++++..++...+..
T Consensus 49 vl~~L~i~--pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL---~~~Rv~lv~~nF~~l~~~L~~ 122 (347)
T 3tka_A 49 AVNGLNIR--PDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI---DDPRFSIIHGPFSALGEYVAE 122 (347)
T ss_dssp HHHHTCCC--TTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC---CCTTEEEEESCGGGHHHHHHH
T ss_pred HHHhhCCC--CCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh---cCCcEEEEeCCHHHHHHHHHh
Confidence 44444433 4789999999999999988875 2 48999999999999994 33 234699999999887543321
Q ss_pred C-C-CCCcEEEECC
Q 043853 134 A-F-PKPDIVISDP 145 (222)
Q Consensus 134 ~-~-~~fD~ii~~p 145 (222)
. . +.+|.|+.|.
T Consensus 123 ~g~~~~vDgILfDL 136 (347)
T 3tka_A 123 RDLIGKIDGILLDL 136 (347)
T ss_dssp TTCTTCEEEEEEEC
T ss_pred cCCCCcccEEEECC
Confidence 1 1 2599999886
No 300
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=97.87 E-value=0.00027 Score=61.84 Aligned_cols=78 Identities=18% Similarity=0.179 Sum_probs=57.6
Q ss_pred CCeEEEEecccchhHHHHhhcCC-eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhc-------------CC
Q 043853 68 SEIVLDLFCGTGTIGLTLARWVK-HVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDF-------------GN 133 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~~~-~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~-------------~~ 133 (222)
.-+++|++||.|++++.+.+.+. -+.++|+++.+++..+.|... .++..++.+|+.++.... ..
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~--~p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i~~ 165 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYC--DPATHHFNEDIRDITLSHQEGVSDEAAAEHIRQ 165 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCC--CTTTCEEESCTHHHHCTTCTTSCHHHHHHHHHH
T ss_pred cceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhccc--CCCcceeccchhhhhhccccccchhhHHhhhhh
Confidence 35899999999999998877554 589999999999988888621 123567789988775210 00
Q ss_pred CCCCCcEEEECCCC
Q 043853 134 AFPKPDIVISDPNR 147 (222)
Q Consensus 134 ~~~~fD~ii~~pp~ 147 (222)
....+|+++..||+
T Consensus 166 ~~~~~Dvl~gGpPC 179 (482)
T 3me5_A 166 HIPEHDVLLAGFPC 179 (482)
T ss_dssp HSCCCSEEEEECCC
T ss_pred cCCCCCEEEecCCC
Confidence 11368999999983
No 301
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=97.77 E-value=2e-05 Score=65.59 Aligned_cols=63 Identities=25% Similarity=0.375 Sum_probs=52.2
Q ss_pred CCCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh
Q 043853 66 DGSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG 129 (222)
Q Consensus 66 ~~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~ 129 (222)
.++..|||.+||+|+.+++..+.+.+.+|+|+++..++.++++++..+.+ ...++.|+.++..
T Consensus 251 ~~~~~VlDpF~GsGtt~~aa~~~gr~~ig~e~~~~~~~~~~~r~~~~~~~-~~~~~~~~~~i~~ 313 (323)
T 1boo_A 251 EPDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVAASAFRFLDNNIS-EEKITDIYNRILN 313 (323)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHGGGSCSCSC-HHHHHHHHHHHHT
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCCCEEEEeCCHHHHHHHHHHHHhcccc-hHHHHHHHHHHHc
Confidence 35789999999999999999988999999999999999999998765543 5555666666543
No 302
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=97.74 E-value=0.00056 Score=63.37 Aligned_cols=54 Identities=15% Similarity=0.202 Sum_probs=41.6
Q ss_pred CCeEEEEecccchhHHHHhhcC-------CeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhc
Q 043853 68 SEIVLDLFCGTGTIGLTLARWV-------KHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNK 126 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~~-------~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~ 126 (222)
..+||||+||.|++++.+.+.+ .-+.++|+++.+++..+.|.. +..+.+.|+.+
T Consensus 212 ~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp-----~~~~~~~di~~ 272 (784)
T 4ft4_B 212 TATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHP-----QTEVRNEKADE 272 (784)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCT-----TSEEEESCHHH
T ss_pred CCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCC-----CCceecCcHHH
Confidence 4579999999999999776543 367899999999999988853 34555666543
No 303
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=97.71 E-value=3.3e-05 Score=64.19 Aligned_cols=48 Identities=15% Similarity=0.189 Sum_probs=41.1
Q ss_pred CCCCeEEEEecccchhHHHHhhcCCeEEEEeCCH---HHHHHHHHHHHHcC
Q 043853 66 DGSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVP---QAISDACRNAKLNN 113 (222)
Q Consensus 66 ~~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~---~~i~~a~~n~~~~~ 113 (222)
.++..|||.+||+|+.+++..+.+.+.+|+|+++ ..++.++++++..+
T Consensus 241 ~~~~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 241 HPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCCCEEEecCCCCCHHHHHHHHcCCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 3578999999999999999999899999999999 99999999887554
No 304
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=97.59 E-value=0.00046 Score=65.25 Aligned_cols=99 Identities=13% Similarity=0.110 Sum_probs=69.4
Q ss_pred CCCeEEEEecccchhHHHHhhcCC--eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhh-----c-------C
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVK--HVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGD-----F-------G 132 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~--~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~-----~-------~ 132 (222)
..-+++|++||.|++++.+.+.+. .+.++|+++.+++..+.|. ++..++.+|+.++... . .
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~-----p~~~~~~~DI~~l~~~~~~~di~~~~~~~l 613 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNN-----PGSTVFTEDCNILLKLVMAGETTNSRGQRL 613 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHC-----TTSEEECSCHHHHHHHHHHTCSBCTTCCBC
T ss_pred CCCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhC-----CCCccccccHHHHhhhccchhhhhhhhhhc
Confidence 345899999999999998877664 6789999999999888874 3567888887654210 0 0
Q ss_pred CCCCCCcEEEECCCCCC------------------ccHHHHHHHHhCCCCcEEEEe
Q 043853 133 NAFPKPDIVISDPNRPG------------------MHMKLIKFLLKLKAPRIVYVS 170 (222)
Q Consensus 133 ~~~~~fD~ii~~pp~~~------------------~~~~~~~~l~~l~~~~~v~~~ 170 (222)
.....+|+|+..||..+ +...+++.+..++|.-+++-.
T Consensus 614 p~~~~vDll~GGpPCQ~FS~ag~~~~~~~~d~R~~L~~~~~riv~~~rPk~~llEN 669 (1002)
T 3swr_A 614 PQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLEN 669 (1002)
T ss_dssp CCTTTCSEEEECCCCTTCCSSSCCCHHHHHHHTTSHHHHHHHHHHHHCCSEEEEEE
T ss_pred ccCCCeeEEEEcCCCcchhhhCCCCCCcccchhhHHHHHHHHHHHHhCCCEEEEec
Confidence 01136899999999322 223455666667887766633
No 305
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.18 E-value=0.003 Score=49.77 Aligned_cols=88 Identities=20% Similarity=0.197 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhc--CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeC-chh
Q 043853 49 QAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARW--VKHVYGYEVVPQAISDACRNAKLNNISNATFVQG-DLN 125 (222)
Q Consensus 49 ~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~--~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~-d~~ 125 (222)
..-++.++.... .+. ++..|+|+||+.|+++...+.. ...|+|+|+-+.-.+.= ..++..|-..++|.++ |+.
T Consensus 63 a~~KL~ei~ek~-~l~--~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P-~~~~s~gwn~v~fk~gvDv~ 138 (267)
T 3p8z_A 63 GSAKLQWFVERN-MVI--PEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEP-VPMSTYGWNIVKLMSGKDVF 138 (267)
T ss_dssp HHHHHHHHHHTT-SSC--CCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCC-CCCCCTTTTSEEEECSCCGG
T ss_pred HHHHHHHHHHhc-CCC--CCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCc-chhhhcCcCceEEEecccee
Confidence 334444433333 333 4779999999999999966653 34899999975432100 0001123334999999 986
Q ss_pred chhhhcCCCCCCCcEEEECCC
Q 043853 126 KIGGDFGNAFPKPDIVISDPN 146 (222)
Q Consensus 126 ~~~~~~~~~~~~fD~ii~~pp 146 (222)
.... .++|.|+||.-
T Consensus 139 ~~~~------~~~DtllcDIg 153 (267)
T 3p8z_A 139 YLPP------EKCDTLLCDIG 153 (267)
T ss_dssp GCCC------CCCSEEEECCC
T ss_pred ecCC------ccccEEEEecC
Confidence 5543 37999999973
No 306
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=97.16 E-value=0.0017 Score=63.02 Aligned_cols=96 Identities=14% Similarity=0.130 Sum_probs=67.8
Q ss_pred CCeEEEEecccchhHHHHhhcCC--eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhc------------CC
Q 043853 68 SEIVLDLFCGTGTIGLTLARWVK--HVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDF------------GN 133 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~~~--~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~------------~~ 133 (222)
..+++|++||.|++++.+.+.+. .+.++|+++.+++..+.|. ++..++.+|+.++.... ..
T Consensus 851 ~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~-----p~~~~~~~DI~~l~~~~~~gdi~~~~~~~lp 925 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNN-----PGTTVFTEDCNVLLKLVMAGEVTNSLGQRLP 925 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHC-----TTSEEECSCHHHHHHHHTTTCSBCSSCCBCC
T ss_pred CceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhC-----CCCcEeeccHHHHhHhhhccchhhhhhhhcc
Confidence 46899999999999999887664 5889999999999888874 34567788876553110 00
Q ss_pred CCCCCcEEEECCCCCC------------------ccHHHHHHHHhCCCCcEEE
Q 043853 134 AFPKPDIVISDPNRPG------------------MHMKLIKFLLKLKAPRIVY 168 (222)
Q Consensus 134 ~~~~fD~ii~~pp~~~------------------~~~~~~~~l~~l~~~~~v~ 168 (222)
....+|+++..||..+ +...+++.+..++|.-+++
T Consensus 926 ~~~~vDvl~GGpPCQ~FS~agr~~~~~~~d~R~~L~~~~lriv~~~rPk~fv~ 978 (1330)
T 3av4_A 926 QKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLL 978 (1330)
T ss_dssp CTTTCSEEEECCCCTTTCSSSCCCHHHHHHHHHSHHHHHHHHHHHHCCSEEEE
T ss_pred ccCccceEEecCCCcccccccccccccccchhhHHHHHHHHHHHHhcCcEEEE
Confidence 1136899999999322 1223555666678876665
No 307
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=97.15 E-value=0.0013 Score=56.46 Aligned_cols=58 Identities=17% Similarity=0.026 Sum_probs=47.6
Q ss_pred CCCCeEEEEecccchhHHHHh-hcC---CeEEEEeCCHHHHHHHHHHHHH--c-CC-CcEEEEeCc
Q 043853 66 DGSEIVLDLFCGTGTIGLTLA-RWV---KHVYGYEVVPQAISDACRNAKL--N-NI-SNATFVQGD 123 (222)
Q Consensus 66 ~~~~~vlDlg~G~G~~~~~la-~~~---~~v~gvD~~~~~i~~a~~n~~~--~-~~-~~v~~~~~d 123 (222)
.++..++|+||+.|..++.++ +.. .+|+++|-+|...+.+++|++. | +. +++++++.-
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~a 290 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCG 290 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSE
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeE
Confidence 457899999999999999877 433 5899999999999999999998 3 45 567766543
No 308
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.10 E-value=0.00026 Score=57.25 Aligned_cols=87 Identities=22% Similarity=0.224 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhc--CCeEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeC-ch
Q 043853 49 QAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARW--VKHVYGYEVVPQAISDACRNAKLNNISN-ATFVQG-DL 124 (222)
Q Consensus 49 ~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~--~~~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~-d~ 124 (222)
.+-+|.++.... .+. ++.+|||||||.|+++..+++. ...+.|+|+...+...+... ...+. + +.+... |+
T Consensus 75 AAfKL~ei~eK~-~Lk--~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~~~g~-~ii~~~~~~dv 149 (282)
T 3gcz_A 75 GSAKLRWMEERG-YVK--PTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-TTLGW-NLIRFKDKTDV 149 (282)
T ss_dssp HHHHHHHHHHTT-SCC--CCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-CBTTG-GGEEEECSCCG
T ss_pred HHHHHHHHHHhc-CCC--CCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-ccCCC-ceEEeeCCcch
Confidence 444555544443 333 4679999999999999977753 33788999975432222110 00111 3 333322 44
Q ss_pred hchhhhcCCCCCCCcEEEECCC
Q 043853 125 NKIGGDFGNAFPKPDIVISDPN 146 (222)
Q Consensus 125 ~~~~~~~~~~~~~fD~ii~~pp 146 (222)
..+. ..++|+|++|..
T Consensus 150 ~~l~------~~~~DvVLSDmA 165 (282)
T 3gcz_A 150 FNME------VIPGDTLLCDIG 165 (282)
T ss_dssp GGSC------CCCCSEEEECCC
T ss_pred hhcC------CCCcCEEEecCc
Confidence 3322 258999999973
No 309
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.03 E-value=0.0018 Score=52.21 Aligned_cols=115 Identities=16% Similarity=0.094 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhc--CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchh
Q 043853 48 HQAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARW--VKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLN 125 (222)
Q Consensus 48 ~~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~--~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~ 125 (222)
+.+-+|.++... ..+. ++.+|||||||.|+++..+++. ...+.|+|+.-.+....... ...+. ++..+.+++.
T Consensus 58 RaA~KL~ei~ek-~~l~--~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~-~~~g~-~ii~~~~~~d 132 (277)
T 3evf_A 58 RGTAKLRWFHER-GYVK--LEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNV-QSLGW-NIITFKDKTD 132 (277)
T ss_dssp THHHHHHHHHHT-TSSC--CCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCC-CBTTG-GGEEEECSCC
T ss_pred cHHHHHHHHHHh-CCCC--CCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccccc-CcCCC-CeEEEeccce
Confidence 345555554444 3233 4679999999999999977754 34778888873221000000 00011 3344455442
Q ss_pred chhhhcCCCCCCCcEEEECC-CCCCcc--H-----HHHHHH-HhCCCC-cEEEEee
Q 043853 126 KIGGDFGNAFPKPDIVISDP-NRPGMH--M-----KLIKFL-LKLKAP-RIVYVSC 171 (222)
Q Consensus 126 ~~~~~~~~~~~~fD~ii~~p-p~~~~~--~-----~~~~~l-~~l~~~-~~v~~~~ 171 (222)
... + ...+||+|++|. |..+.. . .+++.. ..|+|+ |.+++..
T Consensus 133 v~~--l--~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KV 184 (277)
T 3evf_A 133 IHR--L--EPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKV 184 (277)
T ss_dssp TTT--S--CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred ehh--c--CCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEe
Confidence 211 1 125799999997 322221 0 111222 237888 8776554
No 310
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.98 E-value=0.0031 Score=51.30 Aligned_cols=73 Identities=22% Similarity=0.191 Sum_probs=48.0
Q ss_pred CCCeEEEEecccchhHHHHhhc--CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeC-chhchhhhcCCCCCCCcEEEE
Q 043853 67 GSEIVLDLFCGTGTIGLTLARW--VKHVYGYEVVPQAISDACRNAKLNNISNATFVQG-DLNKIGGDFGNAFPKPDIVIS 143 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~--~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~-d~~~~~~~~~~~~~~fD~ii~ 143 (222)
++..|||+||++|+++...+.. ...|+|+|+-..-.+.=+ .++..+-.-|.+..+ |+..+.. .++|+|+|
T Consensus 94 ~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~-~~~ql~w~lV~~~~~~Dv~~l~~------~~~D~ivc 166 (321)
T 3lkz_A 94 PVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQ-LVQSYGWNIVTMKSGVDVFYRPS------ECCDTLLC 166 (321)
T ss_dssp CCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCC-CCCBTTGGGEEEECSCCTTSSCC------CCCSEEEE
T ss_pred CCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcc-hhhhcCCcceEEEeccCHhhCCC------CCCCEEEE
Confidence 4679999999999999966643 338999999754111000 000111112888888 8866543 36999999
Q ss_pred CCC
Q 043853 144 DPN 146 (222)
Q Consensus 144 ~pp 146 (222)
|.-
T Consensus 167 Dig 169 (321)
T 3lkz_A 167 DIG 169 (321)
T ss_dssp CCC
T ss_pred ECc
Confidence 985
No 311
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=96.86 E-value=0.0036 Score=53.53 Aligned_cols=44 Identities=18% Similarity=0.036 Sum_probs=37.0
Q ss_pred CCeEEEEecccchhHHHHhhcC---Ce----EEEEeCCHHHHHHHHHHHHH
Q 043853 68 SEIVLDLFCGTGTIGLTLARWV---KH----VYGYEVVPQAISDACRNAKL 111 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~~---~~----v~gvD~~~~~i~~a~~n~~~ 111 (222)
.-+|+|++||.|++.+.+.+.+ .- +.++|+++.+++.-+.|...
T Consensus 10 ~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~ 60 (403)
T 4dkj_A 10 VIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSK 60 (403)
T ss_dssp EEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCS
T ss_pred cceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCC
Confidence 3589999999999999887644 34 88999999999999988853
No 312
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=96.85 E-value=0.00025 Score=56.56 Aligned_cols=71 Identities=23% Similarity=0.180 Sum_probs=42.8
Q ss_pred CCCCeEEEEecccchhHHHHhhc--CCeEEEEeCCHHHHHHHHHHHH-H-cCCCcEEEEeC-chhchhhhcCCCCCCCcE
Q 043853 66 DGSEIVLDLFCGTGTIGLTLARW--VKHVYGYEVVPQAISDACRNAK-L-NNISNATFVQG-DLNKIGGDFGNAFPKPDI 140 (222)
Q Consensus 66 ~~~~~vlDlg~G~G~~~~~la~~--~~~v~gvD~~~~~i~~a~~n~~-~-~~~~~v~~~~~-d~~~~~~~~~~~~~~fD~ 140 (222)
.++.+|+||||+.|+++..+++. ...|.|.++.... . .. -+. . .|..=+.+.++ |+.+.. ..++|+
T Consensus 72 kpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~-~~-P~~~~~~Gv~~i~~~~G~Df~~~~------~~~~Dv 142 (269)
T 2px2_A 72 QPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H-EE-PMLMQSYGWNIVTMKSGVDVFYKP------SEISDT 142 (269)
T ss_dssp CCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S-CC-CCCCCSTTGGGEEEECSCCGGGSC------CCCCSE
T ss_pred CCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c-cC-CCcccCCCceEEEeeccCCccCCC------CCCCCE
Confidence 35899999999999999988876 3233343332210 0 00 000 0 11111466667 998743 137999
Q ss_pred EEECC
Q 043853 141 VISDP 145 (222)
Q Consensus 141 ii~~p 145 (222)
|++|.
T Consensus 143 VLSDM 147 (269)
T 2px2_A 143 LLCDI 147 (269)
T ss_dssp EEECC
T ss_pred EEeCC
Confidence 99997
No 313
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=96.44 E-value=0.0039 Score=50.73 Aligned_cols=48 Identities=33% Similarity=0.296 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhc--CCeEEEEeCCH
Q 043853 49 QAEVLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARW--VKHVYGYEVVP 99 (222)
Q Consensus 49 ~~~~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~--~~~v~gvD~~~ 99 (222)
.+-.|.++... .+.. ++.+|||+||+.|+++..+++. ...+.|+|+..
T Consensus 66 aa~KL~ei~ek--~l~~-~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~ 115 (300)
T 3eld_A 66 GAAKIRWLHER--GYLR-ITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGI 115 (300)
T ss_dssp THHHHHHHHHH--TSCC-CCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCC
T ss_pred HHHHHHHHHHh--CCCC-CCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecc
Confidence 34445554444 3332 5889999999999999988864 33788999974
No 314
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=96.38 E-value=0.026 Score=46.31 Aligned_cols=123 Identities=13% Similarity=0.045 Sum_probs=72.2
Q ss_pred CCeEEEEecccchhHHHHh----hcCC----eEEEEeCCH--------HHH-HHHHHHHHHc---CCCc--EEEEeCchh
Q 043853 68 SEIVLDLFCGTGTIGLTLA----RWVK----HVYGYEVVP--------QAI-SDACRNAKLN---NISN--ATFVQGDLN 125 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la----~~~~----~v~gvD~~~--------~~i-~~a~~n~~~~---~~~~--v~~~~~d~~ 125 (222)
.-+|+|+|=|+|...+... +..+ +.+++|..+ ... +..+...... .-.+ +++..+|+.
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~ 176 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDAR 176 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHH
Confidence 3579999999999765322 1222 567888632 111 2222222221 1122 688899998
Q ss_pred chhhhcCCCCCCCcEEEECC--CCCC---ccHHHHHHHHh-CCCCcEEEEeeCccchHhhHHHhhccCCCCccCCCeEEe
Q 043853 126 KIGGDFGNAFPKPDIVISDP--NRPG---MHMKLIKFLLK-LKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLK 199 (222)
Q Consensus 126 ~~~~~~~~~~~~fD~ii~~p--p~~~---~~~~~~~~l~~-l~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 199 (222)
+....+.. ..+|+++.|+ |... ...++...+.+ +++++++..-|.....-+.+. +.||.+.
T Consensus 177 ~~l~~l~~--~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laTYtaag~VRR~L~-----------~aGF~V~ 243 (308)
T 3vyw_A 177 KRIKEVEN--FKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVSYSSSLSVRKSLL-----------TLGFKVG 243 (308)
T ss_dssp HHGGGCCS--CCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEESCCCHHHHHHHH-----------HTTCEEE
T ss_pred HHHhhhcc--cceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEEEeCcHHHHHHHH-----------HCCCEEE
Confidence 88776532 3699999997 4221 23567777765 578887765554433333333 4577777
Q ss_pred Eeee
Q 043853 200 SLQP 203 (222)
Q Consensus 200 ~~~~ 203 (222)
...+
T Consensus 244 k~~G 247 (308)
T 3vyw_A 244 SSRE 247 (308)
T ss_dssp EEEC
T ss_pred ecCC
Confidence 6654
No 315
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=96.23 E-value=0.075 Score=43.31 Aligned_cols=116 Identities=18% Similarity=0.119 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEEEec------ccchhHHH-HhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeC
Q 043853 50 AEVLYKLIEDCAGLRDDGSEIVLDLFC------GTGTIGLT-LARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQG 122 (222)
Q Consensus 50 ~~~~~~~i~~~~~~~~~~~~~vlDlg~------G~G~~~~~-la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~ 122 (222)
...+++.+.. ..+..+-+++|||+|+ -.|+..+. +...+..++++|+.|-.. ..+ .++++
T Consensus 93 ytqlcqyl~~-~~~~vp~gmrVLDLGA~s~kg~APGS~VLr~~~p~g~~VVavDL~~~~s-----------da~-~~IqG 159 (344)
T 3r24_A 93 YTQLCQYLNT-LTLAVPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFVS-----------DAD-STLIG 159 (344)
T ss_dssp HHHHHHHHTT-SCCCCCTTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCCBC-----------SSS-EEEES
T ss_pred HHHHHHHhcc-ccEeecCCCEEEeCCCCCCCCCCCcHHHHHHhCCCCcEEEEeeCccccc-----------CCC-eEEEc
Confidence 3344555522 2233345899999997 45664332 212234899999986431 112 44999
Q ss_pred chhchhhhcCCCCCCCcEEEECCC----------C--C-CccHHHHHHHHh-CCCCcEEEEeeCccchHhhHHHh
Q 043853 123 DLNKIGGDFGNAFPKPDIVISDPN----------R--P-GMHMKLIKFLLK-LKAPRIVYVSCNPATCARDLDYL 183 (222)
Q Consensus 123 d~~~~~~~~~~~~~~fD~ii~~pp----------~--~-~~~~~~~~~l~~-l~~~~~v~~~~~~~~~~~~~~~l 183 (222)
|..+.... .+||+|++|.. + . .+.+.+++.... |+++|.+.+-.-..+-...+..+
T Consensus 160 D~~~~~~~-----~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg~~~L~~l 229 (344)
T 3r24_A 160 DCATVHTA-----NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKL 229 (344)
T ss_dssp CGGGEEES-----SCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHH
T ss_pred cccccccC-----CCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCCHHHHHHH
Confidence 98664331 48999999963 1 1 234555555544 88999887666333333444444
No 316
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.07 E-value=0.043 Score=39.23 Aligned_cols=103 Identities=8% Similarity=-0.114 Sum_probs=62.1
Q ss_pred CCeEEEEeccc-chhHH-HHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECC
Q 043853 68 SEIVLDLFCGT-GTIGL-TLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDP 145 (222)
Q Consensus 68 ~~~vlDlg~G~-G~~~~-~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~p 145 (222)
..+|+=+|||. |.... .+.+.+.+++++|.+++.++.+++ . ++.++.+|..+...-........|++++..
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~---g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 79 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----R---GVRAVLGNAANEEIMQLAHLECAKWLILTI 79 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T---TCEEEESCTTSHHHHHHTTGGGCSEEEECC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----c---CCCEEECCCCCHHHHHhcCcccCCEEEEEC
Confidence 35788888763 22222 333456799999999998887764 2 467888988654211111123689998876
Q ss_pred CCCCccHHHHHHHHhCCCCcEEEEeeCccchH
Q 043853 146 NRPGMHMKLIKFLLKLKAPRIVYVSCNPATCA 177 (222)
Q Consensus 146 p~~~~~~~~~~~l~~l~~~~~v~~~~~~~~~~ 177 (222)
|.......+...++.+.+...++.-.+.....
T Consensus 80 ~~~~~n~~~~~~a~~~~~~~~iiar~~~~~~~ 111 (140)
T 3fwz_A 80 PNGYEAGEIVASARAKNPDIEIIARAHYDDEV 111 (140)
T ss_dssp SCHHHHHHHHHHHHHHCSSSEEEEEESSHHHH
T ss_pred CChHHHHHHHHHHHHHCCCCeEEEEECCHHHH
Confidence 64332333455566667776666555543333
No 317
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=95.86 E-value=0.11 Score=44.05 Aligned_cols=74 Identities=12% Similarity=0.038 Sum_probs=44.0
Q ss_pred CCeEEEEecccchhHHHHhhc-----------------CC--eEEEEeCC-----------HHHHHHHHHHHHHcCC-Cc
Q 043853 68 SEIVLDLFCGTGTIGLTLARW-----------------VK--HVYGYEVV-----------PQAISDACRNAKLNNI-SN 116 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~-----------------~~--~v~gvD~~-----------~~~i~~a~~n~~~~~~-~~ 116 (222)
..+|+|+||++|..++.+... .+ +++..|+- |...+.+++ ..+. .+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~---~~g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEK---ENGRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHH---HTCCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhh---hccCCCC
Confidence 478999999999999866533 12 67777876 444443322 2221 12
Q ss_pred EEEEeCchhchhhhcCCCCCCCcEEEECC
Q 043853 117 ATFVQGDLNKIGGDFGNAFPKPDIVISDP 145 (222)
Q Consensus 117 v~~~~~d~~~~~~~~~~~~~~fD~ii~~p 145 (222)
--++.+....+-..+- +.+.+|+|+++-
T Consensus 130 ~~f~~gvpgSFy~rlf-p~~S~d~v~Ss~ 157 (384)
T 2efj_A 130 SCLIGAMPGSFYSRLF-PEESMHFLHSCY 157 (384)
T ss_dssp SEEEEECCSCTTSCCS-CTTCEEEEEEES
T ss_pred ceEEEecchhhhhccC-CCCceEEEEecc
Confidence 3555555555433222 235899998864
No 318
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.67 E-value=0.11 Score=36.92 Aligned_cols=103 Identities=12% Similarity=0.017 Sum_probs=60.5
Q ss_pred CCeEEEEecccchhHHHHh----hcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEE
Q 043853 68 SEIVLDLFCGTGTIGLTLA----RWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVIS 143 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la----~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~ 143 (222)
.++++=+|+| .++..++ +.+.+|+++|.+++.++.+++. .+.++.+|..+...-.......+|+++.
T Consensus 6 ~~~v~I~G~G--~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~-------~~~~~~gd~~~~~~l~~~~~~~~d~vi~ 76 (141)
T 3llv_A 6 RYEYIVIGSE--AAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE-------GFDAVIADPTDESFYRSLDLEGVSAVLI 76 (141)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT-------TCEEEECCTTCHHHHHHSCCTTCSEEEE
T ss_pred CCEEEEECCC--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC-------CCcEEECCCCCHHHHHhCCcccCCEEEE
Confidence 3578888885 4554443 4567999999999988777542 3578888886642211111246899998
Q ss_pred CCCCCCccHHHHHHHHhCCCCcEEEEeeCccchHhhH
Q 043853 144 DPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDL 180 (222)
Q Consensus 144 ~pp~~~~~~~~~~~l~~l~~~~~v~~~~~~~~~~~~~ 180 (222)
..|.......+...++.+. ...++...........+
T Consensus 77 ~~~~~~~n~~~~~~a~~~~-~~~iia~~~~~~~~~~l 112 (141)
T 3llv_A 77 TGSDDEFNLKILKALRSVS-DVYAIVRVSSPKKKEEF 112 (141)
T ss_dssp CCSCHHHHHHHHHHHHHHC-CCCEEEEESCGGGHHHH
T ss_pred ecCCHHHHHHHHHHHHHhC-CceEEEEEcChhHHHHH
Confidence 8773332333444455556 44455444443333333
No 319
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.45 E-value=0.14 Score=38.06 Aligned_cols=98 Identities=15% Similarity=0.069 Sum_probs=58.7
Q ss_pred CCeEEEEeccc-chhHH-HHhhc-CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchh--hhcCCCCCCCcEEE
Q 043853 68 SEIVLDLFCGT-GTIGL-TLARW-VKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIG--GDFGNAFPKPDIVI 142 (222)
Q Consensus 68 ~~~vlDlg~G~-G~~~~-~la~~-~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~--~~~~~~~~~fD~ii 142 (222)
+.+|+=+|+|. |.... .+.+. +.+|+++|.+++.++.+++ .+ +.++.+|..+.. ... .....+|+|+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~----~g---~~~~~gd~~~~~~l~~~-~~~~~ad~vi 110 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS----EG---RNVISGDATDPDFWERI-LDTGHVKLVL 110 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH----TT---CCEEECCTTCHHHHHTB-CSCCCCCEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH----CC---CCEEEcCCCCHHHHHhc-cCCCCCCEEE
Confidence 45788787753 22222 33445 6799999999988776653 23 456777765432 221 0124689998
Q ss_pred ECCCCCCccHHHHHHHHhCCCCcEEEEeeCc
Q 043853 143 SDPNRPGMHMKLIKFLLKLKAPRIVYVSCNP 173 (222)
Q Consensus 143 ~~pp~~~~~~~~~~~l~~l~~~~~v~~~~~~ 173 (222)
...|.......+...++.+.+...++...+.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~ 141 (183)
T 3c85_A 111 LAMPHHQGNQTALEQLQRRNYKGQIAAIAEY 141 (183)
T ss_dssp ECCSSHHHHHHHHHHHHHTTCCSEEEEEESS
T ss_pred EeCCChHHHHHHHHHHHHHCCCCEEEEEECC
Confidence 8766433334445566667766666666554
No 320
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=95.31 E-value=0.13 Score=41.15 Aligned_cols=116 Identities=10% Similarity=0.068 Sum_probs=68.8
Q ss_pred CeEEEEecccchhHHHHhhc---------CCeEEEEeC-----CH----------------------HHHHHH---HHHH
Q 043853 69 EIVLDLFCGTGTIGLTLARW---------VKHVYGYEV-----VP----------------------QAISDA---CRNA 109 (222)
Q Consensus 69 ~~vlDlg~G~G~~~~~la~~---------~~~v~gvD~-----~~----------------------~~i~~a---~~n~ 109 (222)
..|+|+||-.|..+..++.. ..+++++|. .+ +.++.. +++.
T Consensus 71 G~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~~ 150 (257)
T 3tos_A 71 GVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHECS 150 (257)
T ss_dssp SEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHTT
T ss_pred CeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhhh
Confidence 48999999999988876531 258999992 11 112211 1122
Q ss_pred HHcCC--CcEEEEeCchhchhhhcC--CCCCCCcEEEECCCCCCccHHHHHHH-HhCCCCcEEEEeeC----ccchHhhH
Q 043853 110 KLNNI--SNATFVQGDLNKIGGDFG--NAFPKPDIVISDPNRPGMHMKLIKFL-LKLKAPRIVYVSCN----PATCARDL 180 (222)
Q Consensus 110 ~~~~~--~~v~~~~~d~~~~~~~~~--~~~~~fD~ii~~pp~~~~~~~~~~~l-~~l~~~~~v~~~~~----~~~~~~~~ 180 (222)
+..+. ++++++.|++.+....+. .+..++|++++|-.........++.+ ..+.+||+++++.- ...+.+.+
T Consensus 151 ~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~Y~~t~~~le~~~p~l~~GGvIv~DD~~~~~w~G~~~A~ 230 (257)
T 3tos_A 151 DFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDLYEPTKAVLEAIRPYLTKGSIVAFDELDNPKWPGENIAM 230 (257)
T ss_dssp STTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCCHHHHHHHHHHHGGGEEEEEEEEESSTTCTTCTHHHHHH
T ss_pred hhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcccchHHHHHHHHHHHhCCCcEEEEcCCCCCCChHHHHHH
Confidence 22343 469999999988765531 12347999999974211112233333 34688998887653 12344445
Q ss_pred HHhh
Q 043853 181 DYLC 184 (222)
Q Consensus 181 ~~l~ 184 (222)
..+.
T Consensus 231 ~ef~ 234 (257)
T 3tos_A 231 RKVL 234 (257)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 5554
No 321
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=95.17 E-value=0.061 Score=48.95 Aligned_cols=104 Identities=19% Similarity=0.129 Sum_probs=63.7
Q ss_pred CCeEEEEecccchhHHHHhhc----------C----CeEEEEeCCH---HHHHHHH-----------HHHHHc-----CC
Q 043853 68 SEIVLDLFCGTGTIGLTLARW----------V----KHVYGYEVVP---QAISDAC-----------RNAKLN-----NI 114 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~----------~----~~v~gvD~~~---~~i~~a~-----------~n~~~~-----~~ 114 (222)
.-+|+|+|-|+|...+...+. . -+++++|..| ..+..|- +.+... |+
T Consensus 59 ~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 138 (689)
T 3pvc_A 59 SCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGC 138 (689)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEE
T ss_pred ceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCc
Confidence 468999999999988855432 1 2689999944 4443322 111111 11
Q ss_pred -----C----cEEEEeCchhchhhhcCCC-CCCCcEEEECCCCC-----CccHHHHHHHHh-CCCCcEEEEee
Q 043853 115 -----S----NATFVQGDLNKIGGDFGNA-FPKPDIVISDPNRP-----GMHMKLIKFLLK-LKAPRIVYVSC 171 (222)
Q Consensus 115 -----~----~v~~~~~d~~~~~~~~~~~-~~~fD~ii~~pp~~-----~~~~~~~~~l~~-l~~~~~v~~~~ 171 (222)
+ .+++..||+.+....+... ...+|.++.|+... -....+...+.. +++++.+...+
T Consensus 139 ~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~ 211 (689)
T 3pvc_A 139 HRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTFT 211 (689)
T ss_dssp EEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEESC
T ss_pred eEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEecc
Confidence 1 3788999998887765311 24799999997421 123566666655 46666655333
No 322
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.10 E-value=0.22 Score=34.79 Aligned_cols=98 Identities=12% Similarity=0.096 Sum_probs=55.3
Q ss_pred CCeEEEEecccchhHHHH----hhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEE
Q 043853 68 SEIVLDLFCGTGTIGLTL----ARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVIS 143 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~l----a~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~ 143 (222)
+++|+=+|+ |.++..+ ++.+.+++.+|.++..++.+++. . ++.++.+|..+...-.......+|+|+.
T Consensus 4 ~m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~---~---~~~~~~~d~~~~~~l~~~~~~~~d~vi~ 75 (140)
T 1lss_A 4 GMYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE---I---DALVINGDCTKIKTLEDAGIEDADMYIA 75 (140)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---C---SSEEEESCTTSHHHHHHTTTTTCSEEEE
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh---c---CcEEEEcCCCCHHHHHHcCcccCCEEEE
Confidence 457877776 5555433 34466899999998877655432 1 2456777764432110011236899998
Q ss_pred CCCCCCccHHHHHHHHhCCCCcEEEEeeCc
Q 043853 144 DPNRPGMHMKLIKFLLKLKAPRIVYVSCNP 173 (222)
Q Consensus 144 ~pp~~~~~~~~~~~l~~l~~~~~v~~~~~~ 173 (222)
..|.......+...++.++++.++....++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~ 105 (140)
T 1lss_A 76 VTGKEEVNLMSSLLAKSYGINKTIARISEI 105 (140)
T ss_dssp CCSCHHHHHHHHHHHHHTTCCCEEEECSST
T ss_pred eeCCchHHHHHHHHHHHcCCCEEEEEecCH
Confidence 876433223344455556766655544333
No 323
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=95.00 E-value=0.15 Score=39.20 Aligned_cols=94 Identities=18% Similarity=0.088 Sum_probs=54.3
Q ss_pred EEEEecccchhHHHHhh----cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCC
Q 043853 71 VLDLFCGTGTIGLTLAR----WVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPN 146 (222)
Q Consensus 71 vlDlg~G~G~~~~~la~----~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp 146 (222)
|+=+|+ |.++..+++ .+.+++.+|.+++.++...+. . ++.++.+|..+...-........|++++..+
T Consensus 3 iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~---~---~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 74 (218)
T 3l4b_C 3 VIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK---L---KATIIHGDGSHKEILRDAEVSKNDVVVILTP 74 (218)
T ss_dssp EEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH---S---SSEEEESCTTSHHHHHHHTCCTTCEEEECCS
T ss_pred EEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH---c---CCeEEEcCCCCHHHHHhcCcccCCEEEEecC
Confidence 444554 666655543 466999999999988765432 1 3678999987642111111247899988776
Q ss_pred CCCccHHHHHHHHhCCCCcEEEEeeC
Q 043853 147 RPGMHMKLIKFLLKLKAPRIVYVSCN 172 (222)
Q Consensus 147 ~~~~~~~~~~~l~~l~~~~~v~~~~~ 172 (222)
.......+....+.+.+...++.-.+
T Consensus 75 ~d~~n~~~~~~a~~~~~~~~iia~~~ 100 (218)
T 3l4b_C 75 RDEVNLFIAQLVMKDFGVKRVVSLVN 100 (218)
T ss_dssp CHHHHHHHHHHHHHTSCCCEEEECCC
T ss_pred CcHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 43332233334444455555554443
No 324
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=94.82 E-value=0.04 Score=46.27 Aligned_cols=78 Identities=14% Similarity=0.144 Sum_probs=49.2
Q ss_pred CCCeEEEEecccchhHHHHhhc----------------CC--eEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEeCchhch
Q 043853 67 GSEIVLDLFCGTGTIGLTLARW----------------VK--HVYGYEVVPQAISDACRNAKLNNIS-NATFVQGDLNKI 127 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~----------------~~--~v~gvD~~~~~i~~a~~n~~~~~~~-~v~~~~~d~~~~ 127 (222)
+.-+|+|+||++|..++.+... .+ +|+..|+-......+-+.+....-. +-.++.+....+
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhh
Confidence 3467999999999988755432 12 7889999888888777665432110 234555544443
Q ss_pred hhhcCCCCCCCcEEEECC
Q 043853 128 GGDFGNAFPKPDIVISDP 145 (222)
Q Consensus 128 ~~~~~~~~~~fD~ii~~p 145 (222)
-..+- +.+.+|+++++-
T Consensus 131 y~rlf-p~~S~d~v~Ss~ 147 (359)
T 1m6e_X 131 YGRLF-PRNTLHFIHSSY 147 (359)
T ss_dssp SSCCS-CTTCBSCEEEES
T ss_pred hhccC-CCCceEEEEehh
Confidence 32222 235799998864
No 325
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.76 E-value=0.29 Score=40.24 Aligned_cols=57 Identities=21% Similarity=0.209 Sum_probs=39.4
Q ss_pred cEEEEeCchhchhhhcCCCCCCCcEEEECCCCCCc----------------cHHHHHHH-HhCCCCcEEEEeeCcc
Q 043853 116 NATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGM----------------HMKLIKFL-LKLKAPRIVYVSCNPA 174 (222)
Q Consensus 116 ~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~~~----------------~~~~~~~l-~~l~~~~~v~~~~~~~ 174 (222)
...++++|..+....+. .+.||+|++|||+... ...++..+ +.|+++|.+++.++..
T Consensus 14 ~~~ii~gD~~~~l~~l~--~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~ 87 (323)
T 1boo_A 14 NGSMYIGDSLELLESFP--EESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGA 87 (323)
T ss_dssp SEEEEESCHHHHGGGSC--SSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred CceEEeCcHHHHHhhCC--CCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCE
Confidence 48899999988765443 3579999999996432 22333333 3378999999887643
No 326
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=94.64 E-value=0.13 Score=43.90 Aligned_cols=97 Identities=11% Similarity=0.078 Sum_probs=63.2
Q ss_pred CCeEEEEecccchhHHHH----hhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEE
Q 043853 68 SEIVLDLFCGTGTIGLTL----ARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVIS 143 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~l----a~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~ 143 (222)
..+|+=+|+| .++..+ ...+..++.+|.+++.++.+++ . ++.++.+|+.+...-........|+|++
T Consensus 4 ~~~viIiG~G--r~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~---g~~vi~GDat~~~~L~~agi~~A~~viv 74 (413)
T 3l9w_A 4 GMRVIIAGFG--RFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----F---GMKVFYGDATRMDLLESAGAAKAEVLIN 74 (413)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----T---TCCCEESCTTCHHHHHHTTTTTCSEEEE
T ss_pred CCeEEEECCC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----C---CCeEEEcCCCCHHHHHhcCCCccCEEEE
Confidence 4567777775 444433 3446799999999999988864 2 3568999987753211112347899988
Q ss_pred CCCCCCccHHHHHHHHhCCCCcEEEEeeCc
Q 043853 144 DPNRPGMHMKLIKFLLKLKAPRIVYVSCNP 173 (222)
Q Consensus 144 ~pp~~~~~~~~~~~l~~l~~~~~v~~~~~~ 173 (222)
..+.......+...++.+.|...++.-...
T Consensus 75 ~~~~~~~n~~i~~~ar~~~p~~~Iiara~~ 104 (413)
T 3l9w_A 75 AIDDPQTNLQLTEMVKEHFPHLQIIARARD 104 (413)
T ss_dssp CCSSHHHHHHHHHHHHHHCTTCEEEEEESS
T ss_pred CCCChHHHHHHHHHHHHhCCCCeEEEEECC
Confidence 776544445556666677787666655544
No 327
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=94.34 E-value=0.1 Score=42.34 Aligned_cols=56 Identities=11% Similarity=0.107 Sum_probs=37.6
Q ss_pred cEEEEeCchhchhhhcCCCCCCCcEEEECCCCCCcc---------------H-------HHHHHH-HhCCCCcEEEEeeC
Q 043853 116 NATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMH---------------M-------KLIKFL-LKLKAPRIVYVSCN 172 (222)
Q Consensus 116 ~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~~~~---------------~-------~~~~~l-~~l~~~~~v~~~~~ 172 (222)
.++++++|+.+....+. .+.||+|++|||+.... . .++..+ +.|+++|.+++...
T Consensus 21 ~~~i~~gD~~~~l~~l~--~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 21 VHRLHVGDAREVLASFP--EASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp CEEEEESCHHHHHTTSC--TTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCEEEECcHHHHHhhCC--CCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 47999999998765443 25799999999964210 1 122222 23789999988876
Q ss_pred c
Q 043853 173 P 173 (222)
Q Consensus 173 ~ 173 (222)
.
T Consensus 99 d 99 (297)
T 2zig_A 99 D 99 (297)
T ss_dssp C
T ss_pred C
Confidence 4
No 328
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=93.87 E-value=0.24 Score=41.75 Aligned_cols=21 Identities=19% Similarity=0.313 Sum_probs=17.8
Q ss_pred CCCeEEEEecccchhHHHHhh
Q 043853 67 GSEIVLDLFCGTGTIGLTLAR 87 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~ 87 (222)
+..+|+|+|||+|..++.++.
T Consensus 52 ~~~~IaDlGCssG~Nt~~~v~ 72 (374)
T 3b5i_A 52 PPFTAVDLGCSSGANTVHIID 72 (374)
T ss_dssp CCEEEEEETCCSSHHHHHHHH
T ss_pred CceEEEecCCCCChhHHHHHH
Confidence 357899999999999997754
No 329
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=93.42 E-value=0.48 Score=38.94 Aligned_cols=58 Identities=10% Similarity=-0.053 Sum_probs=39.9
Q ss_pred EEEE-eCchhchhhhcCCCCCCCcEEEECCCCCCc-------------cHHHHHH-HHhCCCCcEEEEeeCccch
Q 043853 117 ATFV-QGDLNKIGGDFGNAFPKPDIVISDPNRPGM-------------HMKLIKF-LLKLKAPRIVYVSCNPATC 176 (222)
Q Consensus 117 v~~~-~~d~~~~~~~~~~~~~~fD~ii~~pp~~~~-------------~~~~~~~-l~~l~~~~~v~~~~~~~~~ 176 (222)
.+++ ++|..+....+. .+.+|+|++|||+... ....+.. .+.++++|.+++.++....
T Consensus 39 ~~l~i~gD~l~~L~~l~--~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~~~~ 111 (319)
T 1eg2_A 39 RHVYDVCDCLDTLAKLP--DDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGLQYQ 111 (319)
T ss_dssp EEEEEECCHHHHHHTSC--TTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECSCCC
T ss_pred ceEEECCcHHHHHHhCc--cCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCcccc
Confidence 6788 999988876543 2479999999996432 1222233 2337899999998875433
No 330
>2qrv_B DNA (cytosine-5)-methyltransferase 3-like; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=93.40 E-value=0.051 Score=42.57 Aligned_cols=76 Identities=13% Similarity=0.027 Sum_probs=45.6
Q ss_pred CCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCCC
Q 043853 68 SEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNR 147 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~ 147 (222)
..+++|++||.|+ + +.+.+-++ +.|. +...++.+|+.++..........+|+++..||.
T Consensus 33 ~~~vidLFaGig~-G--l~~aGf~~-------------~~N~-----~~~~~~~~DI~~i~~~~i~~~~~~DlliGG~PC 91 (230)
T 2qrv_B 33 PVRVLSLFEDIKK-E--LTSLGFLE-------------SGSD-----PGQLKHVVDVTDTVRKDVEEWGPFDLVYGATPP 91 (230)
T ss_dssp CCCEEEESSCCTT-T--TTTTTSCC-----------------------CCEEEESCCTTCCHHHHHHTCCCSEEEEECCC
T ss_pred CceEEEeccChhH-H--HHHCCCch-------------hhcC-----CCCcEecCChhhCCHhHhcccCCCCEEEECCCC
Confidence 4579999999886 2 23333232 1222 223467899988753211111369999999994
Q ss_pred CC---------ccHHHHHHHHhCCCC
Q 043853 148 PG---------MHMKLIKFLLKLKAP 164 (222)
Q Consensus 148 ~~---------~~~~~~~~l~~l~~~ 164 (222)
.+ +..++.+.+..++|.
T Consensus 92 Q~FS~ag~rg~Lf~ef~Riv~~~rPk 117 (230)
T 2qrv_B 92 LGHTCDRPPSWYLFQFHRLLQYARPK 117 (230)
T ss_dssp TTTSSCSCTHHHHHHHHHHHHHHCCC
T ss_pred CcccccCCCchHHHHHHHHHHHHCcC
Confidence 33 556677777777776
No 331
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=93.27 E-value=0.14 Score=40.78 Aligned_cols=58 Identities=17% Similarity=0.196 Sum_probs=38.7
Q ss_pred EEEEeCchhchhhhcCCCCCCCcEEEECCCCCCc----------------cHHHHHHHH-hCCCCcEEEEeeCccch
Q 043853 117 ATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGM----------------HMKLIKFLL-KLKAPRIVYVSCNPATC 176 (222)
Q Consensus 117 v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~~~----------------~~~~~~~l~-~l~~~~~v~~~~~~~~~ 176 (222)
.+++++|+.+....+. .+.||+|++|||+..- ...+++.+. .++++|.+|+...+...
T Consensus 5 ~~l~~gD~~~~l~~l~--~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~~d~~~ 79 (260)
T 1g60_A 5 NKIHQMNCFDFLDQVE--NKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFNTPFNC 79 (260)
T ss_dssp SSEEECCHHHHHHHSC--TTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEECHHHH
T ss_pred CeEEechHHHHHHhcc--ccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEcCcHHH
Confidence 4688999988776554 2479999999996422 123333333 37899999988654333
No 332
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=93.12 E-value=0.79 Score=36.58 Aligned_cols=78 Identities=18% Similarity=0.064 Sum_probs=52.6
Q ss_pred CCeEEEEecccchhHHHH----hhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhch-h------hhcCCCCC
Q 043853 68 SEIVLDLFCGTGTIGLTL----ARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKI-G------GDFGNAFP 136 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~l----a~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~-~------~~~~~~~~ 136 (222)
++++|=.|++ |+++.++ ++.+.+|+.++.++...+.+.+.+...+-.++.++.+|+.+. . .......+
T Consensus 12 ~k~vlITGas-~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g 90 (311)
T 3o26_A 12 RRCAVVTGGN-KGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFG 90 (311)
T ss_dssp CCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred CcEEEEecCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCC
Confidence 5667766654 5555544 445779999999998888877777665545699999998775 1 11111113
Q ss_pred CCcEEEECCC
Q 043853 137 KPDIVISDPN 146 (222)
Q Consensus 137 ~fD~ii~~pp 146 (222)
..|++|.+.-
T Consensus 91 ~iD~lv~nAg 100 (311)
T 3o26_A 91 KLDILVNNAG 100 (311)
T ss_dssp SCCEEEECCC
T ss_pred CCCEEEECCc
Confidence 6899999863
No 333
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=92.88 E-value=0.085 Score=44.42 Aligned_cols=76 Identities=12% Similarity=-0.038 Sum_probs=47.1
Q ss_pred CCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCCC
Q 043853 68 SEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNR 147 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~ 147 (222)
..+++|++||.|+ + +.+.+-++ ..+.++..++.+|+.++..........+|+|+..||.
T Consensus 189 ~ikvidLFaGiGg-G--l~~aGf~v------------------~~N~~~~~~~~~DI~~i~~~~i~~~~~~DlliGG~PC 247 (386)
T 2pv0_B 189 PVRVLSLFEDIKK-E--LTSLGFLE------------------SGSDPGQLKHVVDVTDTVRKDVEEWGPFDLVYGATPP 247 (386)
T ss_dssp CCCEEEESSCCHH-H--HHHTTSSC------------------SSCCSCSEEEESCCTTCCHHHHHHSCCCSEEEEECCC
T ss_pred CceeeEEeccCCh-h--HhhcCccH------------------HHcCCCCcEEeCChhhCCHhHhcccCCCCEEEECCCC
Confidence 3579999999995 3 33333332 1222233567789887753211111369999999983
Q ss_pred C---------CccHHHHHHHHhCCCC
Q 043853 148 P---------GMHMKLIKFLLKLKAP 164 (222)
Q Consensus 148 ~---------~~~~~~~~~l~~l~~~ 164 (222)
. .+..++.+.+..++|.
T Consensus 248 Q~FS~A~~Rg~Lf~ef~Riv~~~rPk 273 (386)
T 2pv0_B 248 LGHTCDRPPSWYLFQFHRLLQYARPK 273 (386)
T ss_dssp TTTCSCSCTHHHHHHHHHHHHHHSCC
T ss_pred CcccccCCcchHHHHHHHHHHHhCCC
Confidence 3 3556777777777775
No 334
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=92.72 E-value=0.45 Score=39.62 Aligned_cols=96 Identities=10% Similarity=-0.010 Sum_probs=56.1
Q ss_pred CCCCeEEEEeccc-chhHHHHhh-cCC-eEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhhhcCCCCCCCcEE
Q 043853 66 DGSEIVLDLFCGT-GTIGLTLAR-WVK-HVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGDFGNAFPKPDIV 141 (222)
Q Consensus 66 ~~~~~vlDlg~G~-G~~~~~la~-~~~-~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~~~~~~~fD~i 141 (222)
.++++||-+|+|. |..++.+++ .+. +|+++|.++..++.+++ .|.+. +.....|+.+...... . +.+|+|
T Consensus 189 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~~vi~~~~~~~~~~~~~~~-~-gg~D~v 262 (371)
T 1f8f_A 189 TPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ----LGATHVINSKTQDPVAAIKEIT-D-GGVNFA 262 (371)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH----HTCSEEEETTTSCHHHHHHHHT-T-SCEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH----cCCCEEecCCccCHHHHHHHhc-C-CCCcEE
Confidence 3478999999874 666666665 344 79999999998888864 35542 1111123222222211 1 268998
Q ss_pred EECCCCCCccHHHHHHHHhCCCCcEEEEe
Q 043853 142 ISDPNRPGMHMKLIKFLLKLKAPRIVYVS 170 (222)
Q Consensus 142 i~~pp~~~~~~~~~~~l~~l~~~~~v~~~ 170 (222)
+-... ....+...+..++++|.+.+.
T Consensus 263 id~~g---~~~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 263 LESTG---SPEILKQGVDALGILGKIAVV 288 (371)
T ss_dssp EECSC---CHHHHHHHHHTEEEEEEEEEC
T ss_pred EECCC---CHHHHHHHHHHHhcCCEEEEe
Confidence 87543 123344455666777665543
No 335
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=92.52 E-value=0.93 Score=32.46 Aligned_cols=102 Identities=7% Similarity=0.011 Sum_probs=57.2
Q ss_pred CCeEEEEecccchhHHHHh----hcCCeEEEEeCC-HHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEE
Q 043853 68 SEIVLDLFCGTGTIGLTLA----RWVKHVYGYEVV-PQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVI 142 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la----~~~~~v~gvD~~-~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii 142 (222)
..+++=+|+ |.++..++ +.+.+++.+|.+ +..++...+... .++.++.+|..+...-........|+|+
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~----~~~~~i~gd~~~~~~l~~a~i~~ad~vi 76 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG----DNADVIPGDSNDSSVLKKAGIDRCRAIL 76 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC----TTCEEEESCTTSHHHHHHHTTTTCSEEE
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc----CCCeEEEcCCCCHHHHHHcChhhCCEEE
Confidence 346766665 55555444 346699999997 455544443321 2478899998654211111124689998
Q ss_pred ECCCCCCccHHHHHHHHhCCCCcEEEEeeCccc
Q 043853 143 SDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPAT 175 (222)
Q Consensus 143 ~~pp~~~~~~~~~~~l~~l~~~~~v~~~~~~~~ 175 (222)
+..+.......+...++.+.+...++...+...
T Consensus 77 ~~~~~d~~n~~~~~~a~~~~~~~~ii~~~~~~~ 109 (153)
T 1id1_A 77 ALSDNDADNAFVVLSAKDMSSDVKTVLAVSDSK 109 (153)
T ss_dssp ECSSCHHHHHHHHHHHHHHTSSSCEEEECSSGG
T ss_pred EecCChHHHHHHHHHHHHHCCCCEEEEEECCHH
Confidence 876643333344444555655555555554433
No 336
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=92.51 E-value=0.6 Score=36.08 Aligned_cols=93 Identities=16% Similarity=0.003 Sum_probs=55.5
Q ss_pred CCeEEEEecccchhHHHHhhc----CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEE
Q 043853 68 SEIVLDLFCGTGTIGLTLARW----VKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVIS 143 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~----~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~ 143 (222)
..+++=+|+ |.++..+++. +. ++.+|.++..++.++ . ++.++.+|..+...-........|.+++
T Consensus 9 ~~~viI~G~--G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~---~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (234)
T 2aef_A 9 SRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKKVLR-----S---GANFVHGDPTRVSDLEKANVRGARAVIV 77 (234)
T ss_dssp -CEEEEESC--CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----T---TCEEEESCTTCHHHHHHTTCTTCSEEEE
T ss_pred CCEEEEECC--ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----c---CCeEEEcCCCCHHHHHhcCcchhcEEEE
Confidence 457887777 5666655542 34 999999988776554 1 4688999987542111111246899888
Q ss_pred CCCCCCccHHHHHHHHhCCCCcEEEEee
Q 043853 144 DPNRPGMHMKLIKFLLKLKAPRIVYVSC 171 (222)
Q Consensus 144 ~pp~~~~~~~~~~~l~~l~~~~~v~~~~ 171 (222)
..+.......+...++.+.+...++...
T Consensus 78 ~~~~d~~n~~~~~~a~~~~~~~~iia~~ 105 (234)
T 2aef_A 78 DLESDSETIHCILGIRKIDESVRIIAEA 105 (234)
T ss_dssp CCSCHHHHHHHHHHHHHHCSSSEEEEEC
T ss_pred cCCCcHHHHHHHHHHHHHCCCCeEEEEE
Confidence 7664333333444555567764454444
No 337
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=92.30 E-value=0.85 Score=37.70 Aligned_cols=93 Identities=15% Similarity=0.077 Sum_probs=56.2
Q ss_pred CCCeEEEEeccc-chhHHHHhhc-CC-eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCc---hhchhh---hcCCCCCC
Q 043853 67 GSEIVLDLFCGT-GTIGLTLARW-VK-HVYGYEVVPQAISDACRNAKLNNISNATFVQGD---LNKIGG---DFGNAFPK 137 (222)
Q Consensus 67 ~~~~vlDlg~G~-G~~~~~la~~-~~-~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d---~~~~~~---~~~~~~~~ 137 (222)
++++||-.|+|. |..++.+++. +. +|+++|.++...+.+++ .|.+. ++..+ ..++.. ... . ..
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~~--vi~~~~~~~~~~~~~i~~~~-~-~g 242 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE----IGADL--VLQISKESPQEIARKVEGQL-G-CK 242 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCSE--EEECSSCCHHHHHHHHHHHH-T-SC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hCCCE--EEcCcccccchHHHHHHHHh-C-CC
Confidence 478999999863 5666666653 45 89999999988877754 46642 22221 112111 111 1 36
Q ss_pred CcEEEECCCCCCccHHHHHHHHhCCCCcEEEEe
Q 043853 138 PDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVS 170 (222)
Q Consensus 138 fD~ii~~pp~~~~~~~~~~~l~~l~~~~~v~~~ 170 (222)
+|+++-... ....+...+..++++|.+...
T Consensus 243 ~D~vid~~g---~~~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 243 PEVTIECTG---AEASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp CSEEEECSC---CHHHHHHHHHHSCTTCEEEEC
T ss_pred CCEEEECCC---ChHHHHHHHHHhcCCCEEEEE
Confidence 999987643 223345556667887776543
No 338
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=92.11 E-value=0.45 Score=43.02 Aligned_cols=106 Identities=17% Similarity=0.127 Sum_probs=65.5
Q ss_pred CCeEEEEecccchhHHHHhhc------------CC--eEEEEeC---CHHHHHHHHH-----------HHHHc-----CC
Q 043853 68 SEIVLDLFCGTGTIGLTLARW------------VK--HVYGYEV---VPQAISDACR-----------NAKLN-----NI 114 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~------------~~--~v~gvD~---~~~~i~~a~~-----------n~~~~-----~~ 114 (222)
.-+|+|+|-|+|...+...+. .. +++++|. +++.+..+-. ..... ++
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 458999999999988744321 11 6899999 7776663322 22211 11
Q ss_pred ---------CcEEEEeCchhchhhhcCCC-CCCCcEEEECCCCC-----CccHHHHHHHHh-CCCCcEEEEeeCc
Q 043853 115 ---------SNATFVQGDLNKIGGDFGNA-FPKPDIVISDPNRP-----GMHMKLIKFLLK-LKAPRIVYVSCNP 173 (222)
Q Consensus 115 ---------~~v~~~~~d~~~~~~~~~~~-~~~fD~ii~~pp~~-----~~~~~~~~~l~~-l~~~~~v~~~~~~ 173 (222)
-.+++..+|+.+....+... ...||+++.|+... -....+...+.. +++++.+...+..
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~~~ 221 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTSA 221 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEESCCC
T ss_pred eEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEeccCc
Confidence 12678889998887765311 24799999997421 123555566655 5677776644444
No 339
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=91.88 E-value=0.55 Score=38.51 Aligned_cols=95 Identities=11% Similarity=-0.051 Sum_probs=56.7
Q ss_pred CCCCeEEEEeccc-chhHHHHhhc-CCeEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhhhcCCCCCCCcEEE
Q 043853 66 DGSEIVLDLFCGT-GTIGLTLARW-VKHVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGDFGNAFPKPDIVI 142 (222)
Q Consensus 66 ~~~~~vlDlg~G~-G~~~~~la~~-~~~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~~~~~~~fD~ii 142 (222)
.++++||-.|+|. |..++.+++. +.+|+++|.+++..+.+++ .|.+. +.....|..+...... +.+|+++
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~~~~~~~~~~---g~~d~vi 237 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARR----LGAEVAVNARDTDPAAWLQKEI---GGAHGVL 237 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----TTCSEEEETTTSCHHHHHHHHH---SSEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH----cCCCEEEeCCCcCHHHHHHHhC---CCCCEEE
Confidence 3578899899863 6667766663 5699999999998887754 46542 1111223322222111 2689888
Q ss_pred ECCCCCCccHHHHHHHHhCCCCcEEEEe
Q 043853 143 SDPNRPGMHMKLIKFLLKLKAPRIVYVS 170 (222)
Q Consensus 143 ~~pp~~~~~~~~~~~l~~l~~~~~v~~~ 170 (222)
-... ....+...+..++++|.+.+.
T Consensus 238 d~~g---~~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 238 VTAV---SPKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp ESSC---CHHHHHHHHHHEEEEEEEEEC
T ss_pred EeCC---CHHHHHHHHHHhccCCEEEEe
Confidence 7643 223444455556777665543
No 340
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=91.50 E-value=0.65 Score=38.08 Aligned_cols=92 Identities=17% Similarity=0.038 Sum_probs=55.9
Q ss_pred CeEEEEecccchhHHHHhh----cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEEC
Q 043853 69 EIVLDLFCGTGTIGLTLAR----WVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISD 144 (222)
Q Consensus 69 ~~vlDlg~G~G~~~~~la~----~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~ 144 (222)
.+++=+|+ |.++..+++ .+. ++.+|.+++.++ +++ .++.++.+|+.+...-........|.+++.
T Consensus 116 ~~viI~G~--G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~-------~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~ 184 (336)
T 1lnq_A 116 RHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKK-VLR-------SGANFVHGDPTRVSDLEKANVRGARAVIVD 184 (336)
T ss_dssp CEEEEESC--CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH-------TTCEEEESCTTSHHHHHHTCSTTEEEEEEC
T ss_pred CCEEEECC--cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh-------CCcEEEEeCCCCHHHHHhcChhhccEEEEc
Confidence 46777775 566665553 345 999999998887 553 247899999876532111123478888886
Q ss_pred CCCCCccHHHHHHHHhCCCCcEEEEee
Q 043853 145 PNRPGMHMKLIKFLLKLKAPRIVYVSC 171 (222)
Q Consensus 145 pp~~~~~~~~~~~l~~l~~~~~v~~~~ 171 (222)
.+...........++.+.+...++...
T Consensus 185 ~~~d~~n~~~~~~ar~~~~~~~iiar~ 211 (336)
T 1lnq_A 185 LESDSETIHCILGIRKIDESVRIIAEA 211 (336)
T ss_dssp CSSHHHHHHHHHHHHTTCTTSEEEEEC
T ss_pred CCccHHHHHHHHHHHHHCCCCeEEEEE
Confidence 653322233344455566764555444
No 341
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=91.39 E-value=0.41 Score=34.51 Aligned_cols=99 Identities=14% Similarity=0.068 Sum_probs=55.9
Q ss_pred CCCeEEEEecccchhHHH----HhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCC-CCCCCcEE
Q 043853 67 GSEIVLDLFCGTGTIGLT----LARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGN-AFPKPDIV 141 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~----la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~-~~~~fD~i 141 (222)
.+.+|+=+|+| .++.. +.+.+.+|+.+|.++..++.++. .. ++.++.+|..+.. .+.. ....+|+|
T Consensus 18 ~~~~v~IiG~G--~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~~---g~~~~~~d~~~~~-~l~~~~~~~ad~V 88 (155)
T 2g1u_A 18 KSKYIVIFGCG--RLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---EF---SGFTVVGDAAEFE-TLKECGMEKADMV 88 (155)
T ss_dssp CCCEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---TC---CSEEEESCTTSHH-HHHTTTGGGCSEE
T ss_pred CCCcEEEECCC--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---cC---CCcEEEecCCCHH-HHHHcCcccCCEE
Confidence 46789988875 44433 33446699999999876554431 11 2456667754321 1111 12368999
Q ss_pred EECCCCCCccHHHHHHHHhCCCCcEEEEeeCcc
Q 043853 142 ISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPA 174 (222)
Q Consensus 142 i~~pp~~~~~~~~~~~l~~l~~~~~v~~~~~~~ 174 (222)
+...+.......+...++.+.+...++...+..
T Consensus 89 i~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~ 121 (155)
T 2g1u_A 89 FAFTNDDSTNFFISMNARYMFNVENVIARVYDP 121 (155)
T ss_dssp EECSSCHHHHHHHHHHHHHTSCCSEEEEECSSG
T ss_pred EEEeCCcHHHHHHHHHHHHHCCCCeEEEEECCH
Confidence 887764433344444555555555565555443
No 342
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=91.35 E-value=0.63 Score=38.50 Aligned_cols=60 Identities=17% Similarity=0.164 Sum_probs=46.5
Q ss_pred CCCeEEEEecccchhHHHHhhcCC--eEEEEeCCHHHHHHHHHHHHHcC---------------------CCcEEEEeCc
Q 043853 67 GSEIVLDLFCGTGTIGLTLARWVK--HVYGYEVVPQAISDACRNAKLNN---------------------ISNATFVQGD 123 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~la~~~~--~v~gvD~~~~~i~~a~~n~~~~~---------------------~~~v~~~~~d 123 (222)
+...|+.+|||..+....+....+ .++-+|. |+.++.-++.+...+ -++.+++.+|
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 367999999999999998876433 6666666 888888888877652 1458999999
Q ss_pred hhch
Q 043853 124 LNKI 127 (222)
Q Consensus 124 ~~~~ 127 (222)
+.+.
T Consensus 176 L~d~ 179 (334)
T 1rjd_A 176 LNDI 179 (334)
T ss_dssp TTCH
T ss_pred CCCc
Confidence 9774
No 343
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=91.13 E-value=3.7 Score=32.28 Aligned_cols=77 Identities=18% Similarity=0.173 Sum_probs=50.5
Q ss_pred CCeEEEEecccchhHHHHh----hcCCeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEeCchhchhh------hcCCCCC
Q 043853 68 SEIVLDLFCGTGTIGLTLA----RWVKHVYGYEVVPQAISDACRNAKLNNIS-NATFVQGDLNKIGG------DFGNAFP 136 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la----~~~~~v~gvD~~~~~i~~a~~n~~~~~~~-~v~~~~~d~~~~~~------~~~~~~~ 136 (222)
++++|=.| |+|+++..++ +.+.+|+.++.++..++...+.++..+.+ ++.++.+|+.+... .......
T Consensus 32 ~k~vlVTG-asggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 110 (279)
T 1xg5_A 32 DRLALVTG-ASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS 110 (279)
T ss_dssp TCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 45666665 5566665544 45679999999988887777767665543 48888899865431 0100113
Q ss_pred CCcEEEECC
Q 043853 137 KPDIVISDP 145 (222)
Q Consensus 137 ~fD~ii~~p 145 (222)
.+|++|.+.
T Consensus 111 ~iD~vi~~A 119 (279)
T 1xg5_A 111 GVDICINNA 119 (279)
T ss_dssp CCSEEEECC
T ss_pred CCCEEEECC
Confidence 689998875
No 344
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=90.95 E-value=0.99 Score=37.86 Aligned_cols=95 Identities=16% Similarity=0.156 Sum_probs=62.2
Q ss_pred CCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCc--EEEEeCchhchhhhcCCCCCCCcEEEECC
Q 043853 68 SEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISN--ATFVQGDLNKIGGDFGNAFPKPDIVISDP 145 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~--v~~~~~d~~~~~~~~~~~~~~fD~ii~~p 145 (222)
+..||.++.+-|.+++.++... ++.+.=|-..-..++.|+..|+++. +++... .+- ....+|+++.-.
T Consensus 39 ~~~~~~~~d~~gal~~~~~~~~--~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~------~~~~~~~v~~~l 108 (375)
T 4dcm_A 39 RGPVLILNDAFGALSCALAEHK--PYSIGDSYISELATRENLRLNGIDESSVKFLDS--TAD------YPQQPGVVLIKV 108 (375)
T ss_dssp CSCEEEECCSSSHHHHHTGGGC--CEEEESCHHHHHHHHHHHHHTTCCGGGSEEEET--TSC------CCSSCSEEEEEC
T ss_pred CCCEEEECCCCCHHHHhhccCC--ceEEEhHHHHHHHHHHHHHHcCCCccceEeccc--ccc------cccCCCEEEEEc
Confidence 4679999999999999988643 3445447777788899999999864 555322 111 114799998887
Q ss_pred CCC-CccHHHHHHH-HhCCCCcEEEEeeC
Q 043853 146 NRP-GMHMKLIKFL-LKLKAPRIVYVSCN 172 (222)
Q Consensus 146 p~~-~~~~~~~~~l-~~l~~~~~v~~~~~ 172 (222)
|+. ......+..+ ..+.++..+++...
T Consensus 109 pk~~~~l~~~L~~l~~~l~~~~~i~~~g~ 137 (375)
T 4dcm_A 109 PKTLALLEQQLRALRKVVTSDTRIIAGAK 137 (375)
T ss_dssp CSCHHHHHHHHHHHHTTCCTTSEEEEEEE
T ss_pred CCCHHHHHHHHHHHHhhCCCCCEEEEEec
Confidence 754 2222233333 33677777765553
No 345
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=90.62 E-value=1.6 Score=36.79 Aligned_cols=58 Identities=16% Similarity=-0.025 Sum_probs=37.2
Q ss_pred HHHHHHHHhcCCC-CCCCeEEEEecccchhHHHHhhc---------CCeEEEEeCCHHHHHHHHHHHH
Q 043853 53 LYKLIEDCAGLRD-DGSEIVLDLFCGTGTIGLTLARW---------VKHVYGYEVVPQAISDACRNAK 110 (222)
Q Consensus 53 ~~~~i~~~~~~~~-~~~~~vlDlg~G~G~~~~~la~~---------~~~v~gvD~~~~~i~~a~~n~~ 110 (222)
+..++.+.....+ +..-.|+|+|+|+|.++.-+.+. ..+++-||+||...+.=++.+.
T Consensus 65 la~~~~~~w~~~g~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 132 (387)
T 1zkd_A 65 LGLWSASVWKAADEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLA 132 (387)
T ss_dssp HHHHHHHHHHHTTCCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHST
T ss_pred HHHHHHHHHHHcCCCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhc
Confidence 3445444333222 22347999999999998744321 1279999999988876555543
No 346
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=90.43 E-value=1.4 Score=34.90 Aligned_cols=78 Identities=14% Similarity=0.166 Sum_probs=55.3
Q ss_pred CCCeEEEEecccch---hHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh------hcCCCCCC
Q 043853 67 GSEIVLDLFCGTGT---IGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG------DFGNAFPK 137 (222)
Q Consensus 67 ~~~~vlDlg~G~G~---~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~------~~~~~~~~ 137 (222)
+++.+|=-|++.|. .+..+++.+.+|+.+|.+++.++.+.+.++..+. ++.++.+|+.+... ......++
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~-~~~~~~~Dvt~~~~v~~~~~~~~~~~G~ 84 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGK-EVLGVKADVSKKKDVEEFVRRTFETYSR 84 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 36777777766654 2335566788999999999999998888887765 58889999865431 11112247
Q ss_pred CcEEEECC
Q 043853 138 PDIVISDP 145 (222)
Q Consensus 138 fD~ii~~p 145 (222)
.|+++.|.
T Consensus 85 iDiLVNNA 92 (254)
T 4fn4_A 85 IDVLCNNA 92 (254)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 99999874
No 347
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=90.36 E-value=0.77 Score=36.44 Aligned_cols=78 Identities=14% Similarity=0.042 Sum_probs=54.8
Q ss_pred CCCeEEEEecccch---hHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchh------hhcCCCCCC
Q 043853 67 GSEIVLDLFCGTGT---IGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIG------GDFGNAFPK 137 (222)
Q Consensus 67 ~~~~vlDlg~G~G~---~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~------~~~~~~~~~ 137 (222)
+++++|=-|++.|. .+..+++.+.+|+.+|.+++.++.+.+.+...+. ++..+.+|+.+.. .......++
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~-~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 86 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGY-DAHGVAFDVTDELAIEAAFSKLDAEGIH 86 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTCHHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence 36777777766554 2335556688999999999999888888877665 5888888885542 112223457
Q ss_pred CcEEEECC
Q 043853 138 PDIVISDP 145 (222)
Q Consensus 138 fD~ii~~p 145 (222)
.|+++.|.
T Consensus 87 iDiLVNNA 94 (255)
T 4g81_D 87 VDILINNA 94 (255)
T ss_dssp CCEEEECC
T ss_pred CcEEEECC
Confidence 99999885
No 348
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=90.26 E-value=2.1 Score=35.20 Aligned_cols=97 Identities=10% Similarity=-0.024 Sum_probs=55.5
Q ss_pred CCCeEEEEeccc-chhHHHHhh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEe-CchhchhhhcCC--CCCCCcE
Q 043853 67 GSEIVLDLFCGT-GTIGLTLAR-WVKHVYGYEVVPQAISDACRNAKLNNISN-ATFVQ-GDLNKIGGDFGN--AFPKPDI 140 (222)
Q Consensus 67 ~~~~vlDlg~G~-G~~~~~la~-~~~~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~-~d~~~~~~~~~~--~~~~fD~ 140 (222)
++++||-.|+|. |..++.+++ .+.+|+++|.+++..+.+++ .|.+. +.... .+..+-...... ....+|+
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~ 243 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN----CGADVTLVVDPAKEEESSIIERIRSAIGDLPNV 243 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----TTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH----hCCCEEEcCcccccHHHHHHHHhccccCCCCCE
Confidence 478999999763 555556665 35589999999998887764 46642 11110 222111111100 0136999
Q ss_pred EEECCCCCCccHHHHHHHHhCCCCcEEEEe
Q 043853 141 VISDPNRPGMHMKLIKFLLKLKAPRIVYVS 170 (222)
Q Consensus 141 ii~~pp~~~~~~~~~~~l~~l~~~~~v~~~ 170 (222)
++-... ....+...+..++++|.+...
T Consensus 244 vid~~g---~~~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 244 TIDCSG---NEKCITIGINITRTGGTLMLV 270 (352)
T ss_dssp EEECSC---CHHHHHHHHHHSCTTCEEEEC
T ss_pred EEECCC---CHHHHHHHHHHHhcCCEEEEE
Confidence 987653 122345556667887766543
No 349
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=90.23 E-value=0.92 Score=33.88 Aligned_cols=95 Identities=13% Similarity=-0.017 Sum_probs=53.8
Q ss_pred CCCCeEEEEec--ccchhHHHHhh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEe--CchhchhhhcCCCCCCCcE
Q 043853 66 DGSEIVLDLFC--GTGTIGLTLAR-WVKHVYGYEVVPQAISDACRNAKLNNISNATFVQ--GDLNKIGGDFGNAFPKPDI 140 (222)
Q Consensus 66 ~~~~~vlDlg~--G~G~~~~~la~-~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~--~d~~~~~~~~~~~~~~fD~ 140 (222)
.++++||-.|+ |.|.....+++ .+.+|+++|.+++..+.+++ .+.+. .+.. .+..+...... ....+|+
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~----~g~~~-~~d~~~~~~~~~~~~~~-~~~~~D~ 110 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR----LGVEY-VGDSRSVDFADEILELT-DGYGVDV 110 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT----TCCSE-EEETTCSTHHHHHHHHT-TTCCEEE
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCCCE-EeeCCcHHHHHHHHHHh-CCCCCeE
Confidence 35789999984 44555554443 46799999999887776643 35432 1211 12211111111 1136999
Q ss_pred EEECCCCCCccHHHHHHHHhCCCCcEEEEe
Q 043853 141 VISDPNRPGMHMKLIKFLLKLKAPRIVYVS 170 (222)
Q Consensus 141 ii~~pp~~~~~~~~~~~l~~l~~~~~v~~~ 170 (222)
++.+.. ...+...+..++++|.+...
T Consensus 111 vi~~~g----~~~~~~~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 111 VLNSLA----GEAIQRGVQILAPGGRFIEL 136 (198)
T ss_dssp EEECCC----THHHHHHHHTEEEEEEEEEC
T ss_pred EEECCc----hHHHHHHHHHhccCCEEEEE
Confidence 997652 23445555667777766543
No 350
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=90.15 E-value=5 Score=32.78 Aligned_cols=92 Identities=14% Similarity=0.047 Sum_probs=54.5
Q ss_pred CeEEEEeccc--chhHHHHhhcCCeEEEEeCCHHHHHHHHHHHHH-------cCC-C----------cEEEEeCchhchh
Q 043853 69 EIVLDLFCGT--GTIGLTLARWVKHVYGYEVVPQAISDACRNAKL-------NNI-S----------NATFVQGDLNKIG 128 (222)
Q Consensus 69 ~~vlDlg~G~--G~~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~-------~~~-~----------~v~~~~~d~~~~~ 128 (222)
++|-=+|+|+ +.++..+++.+.+|+.+|.+++.++.+++.+.. .|. + ++++ ..|..+..
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~-~~~~~eav 85 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTNLAEAV 85 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECCHHHHT
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEE-eCCHHHHH
Confidence 4677777774 223445566677999999999999888765432 221 0 1333 23333322
Q ss_pred hhcCCCCCCCcEEEECCCCC-CccHHHHHHHHh-CCCCcEEE
Q 043853 129 GDFGNAFPKPDIVISDPNRP-GMHMKLIKFLLK-LKAPRIVY 168 (222)
Q Consensus 129 ~~~~~~~~~fD~ii~~pp~~-~~~~~~~~~l~~-l~~~~~v~ 168 (222)
...|+|+..-|.. .....+...+.. ++++.++.
T Consensus 86 -------~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~ 120 (319)
T 2dpo_A 86 -------EGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLS 120 (319)
T ss_dssp -------TTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEE
T ss_pred -------hcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEE
Confidence 2579998887733 344556666665 45555444
No 351
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=89.68 E-value=1.1 Score=35.02 Aligned_cols=77 Identities=17% Similarity=0.158 Sum_probs=49.4
Q ss_pred CCeEEEEecccchhHH----HHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCch--hchh------hhcCCCC
Q 043853 68 SEIVLDLFCGTGTIGL----TLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDL--NKIG------GDFGNAF 135 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~----~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~--~~~~------~~~~~~~ 135 (222)
++++|=.|++ |+++. .+++.+.+|+.++.++..++.+.+.+...+..++.++..|+ .+.. .......
T Consensus 12 ~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (252)
T 3f1l_A 12 DRIILVTGAS-DGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNY 90 (252)
T ss_dssp TCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhC
Confidence 5677766654 55554 44455779999999998888777766554433577888887 3321 1111122
Q ss_pred CCCcEEEECC
Q 043853 136 PKPDIVISDP 145 (222)
Q Consensus 136 ~~fD~ii~~p 145 (222)
+..|+++.+.
T Consensus 91 g~id~lv~nA 100 (252)
T 3f1l_A 91 PRLDGVLHNA 100 (252)
T ss_dssp SCCSEEEECC
T ss_pred CCCCEEEECC
Confidence 3789999875
No 352
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=89.63 E-value=2.8 Score=32.93 Aligned_cols=88 Identities=13% Similarity=0.025 Sum_probs=59.1
Q ss_pred CeEEEEecccchhHHHHhh----cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEEC
Q 043853 69 EIVLDLFCGTGTIGLTLAR----WVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISD 144 (222)
Q Consensus 69 ~~vlDlg~G~G~~~~~la~----~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~ 144 (222)
++||=.|| |.++..+++ .+.+|++++.++........ .+++++.+|+.++. ...+|+||..
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~D~~d~~------~~~~d~vi~~ 70 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA-------SGAEPLLWPGEEPS------LDGVTHLLIS 70 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH-------TTEEEEESSSSCCC------CTTCCEEEEC
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh-------CCCeEEEecccccc------cCCCCEEEEC
Confidence 57999994 888776654 46699999998765443332 25899999998843 2468999887
Q ss_pred CCCC----CccHHHHHHHHh--CCCCcEEEEee
Q 043853 145 PNRP----GMHMKLIKFLLK--LKAPRIVYVSC 171 (222)
Q Consensus 145 pp~~----~~~~~~~~~l~~--l~~~~~v~~~~ 171 (222)
.... .....+++.+.. .+...++|+|+
T Consensus 71 a~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss 103 (286)
T 3ius_A 71 TAPDSGGDPVLAALGDQIAARAAQFRWVGYLST 103 (286)
T ss_dssp CCCBTTBCHHHHHHHHHHHHTGGGCSEEEEEEE
T ss_pred CCccccccHHHHHHHHHHHhhcCCceEEEEeec
Confidence 6421 122455566655 34467888886
No 353
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=89.43 E-value=2.1 Score=33.51 Aligned_cols=77 Identities=14% Similarity=0.115 Sum_probs=52.8
Q ss_pred CCeEEEEecccch---hHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh------hcCCCCCCC
Q 043853 68 SEIVLDLFCGTGT---IGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG------DFGNAFPKP 138 (222)
Q Consensus 68 ~~~vlDlg~G~G~---~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~------~~~~~~~~f 138 (222)
++++|=.|++.|. ++..+++.+.+|+.++.++..++.+.+.+...+. ++.++.+|+.+... ......+..
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 89 (264)
T 3ucx_A 11 DKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGR-RALSVGTDITDDAQVAHLVDETMKAYGRV 89 (264)
T ss_dssp TCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 6678877765543 2234555678999999999988888887776553 58899999866431 111122478
Q ss_pred cEEEECC
Q 043853 139 DIVISDP 145 (222)
Q Consensus 139 D~ii~~p 145 (222)
|+++.+.
T Consensus 90 d~lv~nA 96 (264)
T 3ucx_A 90 DVVINNA 96 (264)
T ss_dssp SEEEECC
T ss_pred cEEEECC
Confidence 9999875
No 354
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=89.17 E-value=1.1 Score=34.50 Aligned_cols=77 Identities=12% Similarity=0.117 Sum_probs=50.3
Q ss_pred CCeEEEEecccchhHHHH----hhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCch--hch------hhhcCCCC
Q 043853 68 SEIVLDLFCGTGTIGLTL----ARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDL--NKI------GGDFGNAF 135 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~l----a~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~--~~~------~~~~~~~~ 135 (222)
++++|=.|+ +|+++..+ ++.+.+|+.++.++..++.+.+.++..+..++.++..|+ .+. ........
T Consensus 14 ~k~vlITGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~ 92 (247)
T 3i1j_A 14 GRVILVTGA-ARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEF 92 (247)
T ss_dssp TCEEEESST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCC-CChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhC
Confidence 566776665 45555544 445779999999999998888888776655577777766 221 11111111
Q ss_pred CCCcEEEECC
Q 043853 136 PKPDIVISDP 145 (222)
Q Consensus 136 ~~fD~ii~~p 145 (222)
+..|++|.+.
T Consensus 93 g~id~lv~nA 102 (247)
T 3i1j_A 93 GRLDGLLHNA 102 (247)
T ss_dssp SCCSEEEECC
T ss_pred CCCCEEEECC
Confidence 3689999875
No 355
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=89.07 E-value=1.3 Score=33.56 Aligned_cols=93 Identities=16% Similarity=0.200 Sum_probs=57.7
Q ss_pred eEEEEecccchhHHHHhh----cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECC
Q 043853 70 IVLDLFCGTGTIGLTLAR----WVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDP 145 (222)
Q Consensus 70 ~vlDlg~G~G~~~~~la~----~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~p 145 (222)
+||=.| |+|.++..+++ .+.+|++++.++...+. ..+++++.+|+.+....+......+|+||.+.
T Consensus 2 ~ilItG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---------~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~a 71 (219)
T 3dqp_A 2 KIFIVG-STGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ---------YNNVKAVHFDVDWTPEEMAKQLHGMDAIINVS 71 (219)
T ss_dssp EEEEES-TTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC---------CTTEEEEECCTTSCHHHHHTTTTTCSEEEECC
T ss_pred eEEEEC-CCCHHHHHHHHHHHHCCCEEEEEECCccchhh---------cCCceEEEecccCCHHHHHHHHcCCCEEEECC
Confidence 455444 67887776654 35699999998653221 14699999999872222222234699999876
Q ss_pred CCC-------Cc--cHHHHHHHHhCCCCcEEEEeeC
Q 043853 146 NRP-------GM--HMKLIKFLLKLKAPRIVYVSCN 172 (222)
Q Consensus 146 p~~-------~~--~~~~~~~l~~l~~~~~v~~~~~ 172 (222)
... .. ...+++.+.....+.++++++.
T Consensus 72 g~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~ 107 (219)
T 3dqp_A 72 GSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTI 107 (219)
T ss_dssp CCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred cCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECcc
Confidence 421 11 2355666655556688888873
No 356
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=88.88 E-value=1 Score=37.53 Aligned_cols=95 Identities=19% Similarity=0.053 Sum_probs=55.6
Q ss_pred CCCeEEEEeccc-chhHHHHhhc-CC-eEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhhh---cCCCCCCCc
Q 043853 67 GSEIVLDLFCGT-GTIGLTLARW-VK-HVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGD---FGNAFPKPD 139 (222)
Q Consensus 67 ~~~~vlDlg~G~-G~~~~~la~~-~~-~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~---~~~~~~~fD 139 (222)
++++||=.|+|. |..++.+|+. +. +|+++|.++...+.+++ .|.+. +.....|+.+.... +. . +.+|
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~~vi~~~~~~~~~~i~~~~~~~-~-gg~D 255 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEE----VGATATVDPSAGDVVEAIAGPVGLV-P-GGVD 255 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH----HTCSEEECTTSSCHHHHHHSTTSSS-T-TCEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----cCCCEEECCCCcCHHHHHHhhhhcc-C-CCCC
Confidence 478898898753 5555566653 44 89999999998887765 45542 11112333222221 11 1 2699
Q ss_pred EEEECCCCCCccHHHHHHHHhCCCCcEEEEe
Q 043853 140 IVISDPNRPGMHMKLIKFLLKLKAPRIVYVS 170 (222)
Q Consensus 140 ~ii~~pp~~~~~~~~~~~l~~l~~~~~v~~~ 170 (222)
++|-.. +....+...+..++++|.+.+.
T Consensus 256 vvid~~---G~~~~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 256 VVIECA---GVAETVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp EEEECS---CCHHHHHHHHHHEEEEEEEEEC
T ss_pred EEEECC---CCHHHHHHHHHHhccCCEEEEE
Confidence 998753 2223444555566777766543
No 357
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=88.85 E-value=2.1 Score=29.67 Aligned_cols=95 Identities=13% Similarity=0.100 Sum_probs=53.5
Q ss_pred CCeEEEEecccchhHHHHh----hcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCC-CCCCCcEEE
Q 043853 68 SEIVLDLFCGTGTIGLTLA----RWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGN-AFPKPDIVI 142 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la----~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~-~~~~fD~ii 142 (222)
.++|+=+|+ |.++..++ +.+.+++.+|.++..++.+++ . ...++.+|..+.. .+.. ....+|+++
T Consensus 6 ~~~v~I~G~--G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~----~---~~~~~~~d~~~~~-~l~~~~~~~~d~vi 75 (144)
T 2hmt_A 6 NKQFAVIGL--GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS----Y---ATHAVIANATEEN-ELLSLGIRNFEYVI 75 (144)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT----T---CSEEEECCTTCHH-HHHTTTGGGCSEEE
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----h---CCEEEEeCCCCHH-HHHhcCCCCCCEEE
Confidence 456888886 55555443 345689999999876554332 1 2356677765431 1111 123689999
Q ss_pred ECCCCC-CccHHHHHHHHhCCCCcEEEEeeC
Q 043853 143 SDPNRP-GMHMKLIKFLLKLKAPRIVYVSCN 172 (222)
Q Consensus 143 ~~pp~~-~~~~~~~~~l~~l~~~~~v~~~~~ 172 (222)
...+.. .....+...++.+.+..++....+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~ 106 (144)
T 2hmt_A 76 VAIGANIQASTLTTLLLKELDIPNIWVKAQN 106 (144)
T ss_dssp ECCCSCHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred ECCCCchHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 887643 222344455566677644443433
No 358
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=88.56 E-value=0.69 Score=37.96 Aligned_cols=96 Identities=10% Similarity=0.039 Sum_probs=56.9
Q ss_pred CCCCeEEEEecc--cchhHHHHhh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhhhcCCCCCCCcEE
Q 043853 66 DGSEIVLDLFCG--TGTIGLTLAR-WVKHVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGDFGNAFPKPDIV 141 (222)
Q Consensus 66 ~~~~~vlDlg~G--~G~~~~~la~-~~~~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~~~~~~~fD~i 141 (222)
.++++||-.|+| .|..++.+++ .+.+|+++|.++..++.+++ .|.+. +.....|..+...... ....+|++
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----lga~~~~~~~~~~~~~~~~~~~-~~~g~Dvv 217 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR----LGAAYVIDTSTAPLYETVMELT-NGIGADAA 217 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH----HTCSEEEETTTSCHHHHHHHHT-TTSCEEEE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----CCCcEEEeCCcccHHHHHHHHh-CCCCCcEE
Confidence 358899999987 5666666655 46699999999888888765 35542 1111122222222211 12369999
Q ss_pred EECCCCCCccHHHHHHHHhCCCCcEEEEe
Q 043853 142 ISDPNRPGMHMKLIKFLLKLKAPRIVYVS 170 (222)
Q Consensus 142 i~~pp~~~~~~~~~~~l~~l~~~~~v~~~ 170 (222)
+-+.. .......+..++++|.+...
T Consensus 218 id~~g----~~~~~~~~~~l~~~G~iv~~ 242 (340)
T 3gms_A 218 IDSIG----GPDGNELAFSLRPNGHFLTI 242 (340)
T ss_dssp EESSC----HHHHHHHHHTEEEEEEEEEC
T ss_pred EECCC----ChhHHHHHHHhcCCCEEEEE
Confidence 87643 23334445556777766543
No 359
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=88.26 E-value=0.7 Score=38.10 Aligned_cols=94 Identities=11% Similarity=0.017 Sum_probs=53.4
Q ss_pred CCCeEEEEeccc-chhHHHHhhc-CC-eEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhhhcCCCCCCCcEEE
Q 043853 67 GSEIVLDLFCGT-GTIGLTLARW-VK-HVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGDFGNAFPKPDIVI 142 (222)
Q Consensus 67 ~~~~vlDlg~G~-G~~~~~la~~-~~-~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~~~~~~~fD~ii 142 (222)
++++||=.|+|. |..++.+|+. +. +|+++|.+++.++.+++ .|.+. +.....|..+...... ....+|+++
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~~vi~~~~~~~~~~v~~~t-~g~g~D~v~ 240 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALE----YGATDIINYKNGDIVEQILKAT-DGKGVDKVV 240 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHH----HTCCEEECGGGSCHHHHHHHHT-TTCCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH----hCCceEEcCCCcCHHHHHHHHc-CCCCCCEEE
Confidence 478899888763 5556666654 44 89999999988887765 35542 1111223322222221 223699998
Q ss_pred ECCCCCCccHHHHHHHHhCCCCcEEE
Q 043853 143 SDPNRPGMHMKLIKFLLKLKAPRIVY 168 (222)
Q Consensus 143 ~~pp~~~~~~~~~~~l~~l~~~~~v~ 168 (222)
-..... ..+...+..++++|.+.
T Consensus 241 d~~g~~---~~~~~~~~~l~~~G~~v 263 (352)
T 3fpc_A 241 IAGGDV---HTFAQAVKMIKPGSDIG 263 (352)
T ss_dssp ECSSCT---THHHHHHHHEEEEEEEE
T ss_pred ECCCCh---HHHHHHHHHHhcCCEEE
Confidence 654322 23344444556655544
No 360
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=88.08 E-value=3.1 Score=32.04 Aligned_cols=76 Identities=14% Similarity=0.121 Sum_probs=51.9
Q ss_pred CCeEEEEecccchhHHHH----hhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh------hcCCCCCC
Q 043853 68 SEIVLDLFCGTGTIGLTL----ARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG------DFGNAFPK 137 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~l----a~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~------~~~~~~~~ 137 (222)
++++|=.|+ +|+++..+ ++.+.+|+.++.++...+...+.++..+. ++.++.+|+.+... ........
T Consensus 5 ~k~vlITGa-s~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (247)
T 3lyl_A 5 EKVALVTGA-SRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGF-KARGLVLNISDIESIQNFFAEIKAENLA 82 (247)
T ss_dssp TCEEEESSC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEECC-CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 456666664 55555544 45577999999999988888777776654 58899999865421 11112246
Q ss_pred CcEEEECC
Q 043853 138 PDIVISDP 145 (222)
Q Consensus 138 fD~ii~~p 145 (222)
.|+++.+.
T Consensus 83 id~li~~A 90 (247)
T 3lyl_A 83 IDILVNNA 90 (247)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 89999885
No 361
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=87.85 E-value=1.5 Score=35.65 Aligned_cols=93 Identities=17% Similarity=0.078 Sum_probs=54.0
Q ss_pred CCCCeEEEEec--ccchhHHHHhh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEe---CchhchhhhcCCCCCCCc
Q 043853 66 DGSEIVLDLFC--GTGTIGLTLAR-WVKHVYGYEVVPQAISDACRNAKLNNISNATFVQ---GDLNKIGGDFGNAFPKPD 139 (222)
Q Consensus 66 ~~~~~vlDlg~--G~G~~~~~la~-~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~---~d~~~~~~~~~~~~~~fD 139 (222)
.++++||-.|+ |.|.....+++ .+.+|+++|.+++.++.+++ .+.+ ..+-. .++.+....... ..+|
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~----~g~~-~~~d~~~~~~~~~~~~~~~~--~~~d 216 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ----IGFD-AAFNYKTVNSLEEALKKASP--DGYD 216 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCS-EEEETTSCSCHHHHHHHHCT--TCEE
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----cCCc-EEEecCCHHHHHHHHHHHhC--CCCe
Confidence 34789999997 45555555544 46699999999888777733 3443 22221 222222222221 3699
Q ss_pred EEEECCCCCCccHHHHHHHHhCCCCcEEEE
Q 043853 140 IVISDPNRPGMHMKLIKFLLKLKAPRIVYV 169 (222)
Q Consensus 140 ~ii~~pp~~~~~~~~~~~l~~l~~~~~v~~ 169 (222)
+++.+.. ...+...+..++++|.+.+
T Consensus 217 ~vi~~~g----~~~~~~~~~~l~~~G~~v~ 242 (333)
T 1v3u_A 217 CYFDNVG----GEFLNTVLSQMKDFGKIAI 242 (333)
T ss_dssp EEEESSC----HHHHHHHHTTEEEEEEEEE
T ss_pred EEEECCC----hHHHHHHHHHHhcCCEEEE
Confidence 9988753 1334445555677666543
No 362
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=87.66 E-value=4.2 Score=30.95 Aligned_cols=94 Identities=18% Similarity=0.068 Sum_probs=57.8
Q ss_pred CCeEEEEecccchhHHHHh----hcCCeEEEEeCCHHHHHHHHHHHHHcCCCcE-EEEeCchhchhhhcCCCCCCCcEEE
Q 043853 68 SEIVLDLFCGTGTIGLTLA----RWVKHVYGYEVVPQAISDACRNAKLNNISNA-TFVQGDLNKIGGDFGNAFPKPDIVI 142 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la----~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v-~~~~~d~~~~~~~~~~~~~~fD~ii 142 (222)
+++||=.| |+|.++..++ +.+.+|++++.++...+.... .++ +++.+|+.+.... .....|+||
T Consensus 21 ~~~ilVtG-atG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~-------~~~~~~~~~Dl~~~~~~---~~~~~D~vi 89 (236)
T 3e8x_A 21 GMRVLVVG-ANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE-------RGASDIVVANLEEDFSH---AFASIDAVV 89 (236)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-------TTCSEEEECCTTSCCGG---GGTTCSEEE
T ss_pred CCeEEEEC-CCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh-------CCCceEEEcccHHHHHH---HHcCCCEEE
Confidence 67777666 5666666554 346799999999776544332 147 8999998722221 224689999
Q ss_pred ECCCCCC---c----------cHHHHHHHHhCCCCcEEEEeeC
Q 043853 143 SDPNRPG---M----------HMKLIKFLLKLKAPRIVYVSCN 172 (222)
Q Consensus 143 ~~pp~~~---~----------~~~~~~~l~~l~~~~~v~~~~~ 172 (222)
.+..... . ...+++.+...+.+.++++++.
T Consensus 90 ~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~ 132 (236)
T 3e8x_A 90 FAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSV 132 (236)
T ss_dssp ECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCT
T ss_pred ECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecC
Confidence 8864211 0 1234444444456788888873
No 363
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=87.64 E-value=2.8 Score=34.64 Aligned_cols=95 Identities=13% Similarity=0.056 Sum_probs=57.2
Q ss_pred CCCeEEEEe-cc-cchhHHHHhhc--CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEE
Q 043853 67 GSEIVLDLF-CG-TGTIGLTLARW--VKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVI 142 (222)
Q Consensus 67 ~~~~vlDlg-~G-~G~~~~~la~~--~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii 142 (222)
++++||=.| +| .|..++.+|+. +.+|+++|.+++-++.+++ .|.+.+--...|..+....+ ....+|+++
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~----lGad~vi~~~~~~~~~v~~~--~~~g~Dvvi 244 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS----LGAHHVIDHSKPLAAEVAAL--GLGAPAFVF 244 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH----TTCSEEECTTSCHHHHHHTT--CSCCEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH----cCCCEEEeCCCCHHHHHHHh--cCCCceEEE
Confidence 477888888 44 57777777764 6699999999988888764 56542211112222222222 224699888
Q ss_pred ECCCCCCccHHHHHHHHhCCCCcEEEEe
Q 043853 143 SDPNRPGMHMKLIKFLLKLKAPRIVYVS 170 (222)
Q Consensus 143 ~~pp~~~~~~~~~~~l~~l~~~~~v~~~ 170 (222)
-.. +....+...+..++++|.+.+.
T Consensus 245 d~~---g~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 245 STT---HTDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp ECS---CHHHHHHHHHHHSCTTCEEEEC
T ss_pred ECC---CchhhHHHHHHHhcCCCEEEEE
Confidence 753 2222344556667887776644
No 364
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=87.63 E-value=2.5 Score=33.01 Aligned_cols=79 Identities=11% Similarity=0.060 Sum_probs=53.6
Q ss_pred CCCeEEEEec-ccch---hHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh------hcCCCCC
Q 043853 67 GSEIVLDLFC-GTGT---IGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG------DFGNAFP 136 (222)
Q Consensus 67 ~~~~vlDlg~-G~G~---~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~------~~~~~~~ 136 (222)
.++++|=.|+ |.|. ++..+++.+.+|+.++.++...+.+.+.++..+..++.++.+|+.+... ......+
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 100 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAG 100 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhC
Confidence 3567777776 4443 2235566678999999999988888777766554569999999866431 1111113
Q ss_pred CCcEEEECC
Q 043853 137 KPDIVISDP 145 (222)
Q Consensus 137 ~fD~ii~~p 145 (222)
.+|++|.+.
T Consensus 101 ~id~li~~A 109 (266)
T 3o38_A 101 RLDVLVNNA 109 (266)
T ss_dssp CCCEEEECC
T ss_pred CCcEEEECC
Confidence 689999886
No 365
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=87.54 E-value=1.9 Score=35.84 Aligned_cols=91 Identities=12% Similarity=-0.004 Sum_probs=54.5
Q ss_pred CCCeEEEEecc-cchhHHHHhhc-CC-eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEe-----CchhchhhhcCCCCCCC
Q 043853 67 GSEIVLDLFCG-TGTIGLTLARW-VK-HVYGYEVVPQAISDACRNAKLNNISNATFVQ-----GDLNKIGGDFGNAFPKP 138 (222)
Q Consensus 67 ~~~~vlDlg~G-~G~~~~~la~~-~~-~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~-----~d~~~~~~~~~~~~~~f 138 (222)
++++||=+|+| .|..++.+|+. +. +|+++|.++..++.+++ .|.+. ++. .|+.+....+. . +.+
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~----lGa~~--vi~~~~~~~~~~~~i~~~~-~-gg~ 264 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKK----FGVNE--FVNPKDHDKPIQEVIVDLT-D-GGV 264 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHT----TTCCE--EECGGGCSSCHHHHHHHHT-T-SCB
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----cCCcE--EEccccCchhHHHHHHHhc-C-CCC
Confidence 47889989886 35566666653 44 89999999988887753 46542 222 22222222222 1 269
Q ss_pred cEEEECCCCCCccHHHHHHHHhCCCC-cEEE
Q 043853 139 DIVISDPNRPGMHMKLIKFLLKLKAP-RIVY 168 (222)
Q Consensus 139 D~ii~~pp~~~~~~~~~~~l~~l~~~-~~v~ 168 (222)
|+++-... ....+...+..++++ |.+.
T Consensus 265 D~vid~~g---~~~~~~~~~~~l~~g~G~iv 292 (378)
T 3uko_A 265 DYSFECIG---NVSVMRAALECCHKGWGTSV 292 (378)
T ss_dssp SEEEECSC---CHHHHHHHHHTBCTTTCEEE
T ss_pred CEEEECCC---CHHHHHHHHHHhhccCCEEE
Confidence 99987543 223455566667774 6554
No 366
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=87.12 E-value=1.1 Score=38.63 Aligned_cols=71 Identities=14% Similarity=0.101 Sum_probs=47.1
Q ss_pred CCeEEEEecccchhHHHHhh----cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEE
Q 043853 68 SEIVLDLFCGTGTIGLTLAR----WVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVIS 143 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~----~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~ 143 (222)
.++|+=+||| .++..+|+ .+..|+.+|.+++.++.+.+.+ ++..+.||+.+..--.....+..|++++
T Consensus 3 ~M~iiI~G~G--~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~------~~~~i~Gd~~~~~~L~~Agi~~ad~~ia 74 (461)
T 4g65_A 3 AMKIIILGAG--QVGGTLAENLVGENNDITIVDKDGDRLRELQDKY------DLRVVNGHASHPDVLHEAGAQDADMLVA 74 (461)
T ss_dssp CEEEEEECCS--HHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS------SCEEEESCTTCHHHHHHHTTTTCSEEEE
T ss_pred cCEEEEECCC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc------CcEEEEEcCCCHHHHHhcCCCcCCEEEE
Confidence 4567666665 45554443 3458999999999998876643 4788999997753211112247899887
Q ss_pred CCC
Q 043853 144 DPN 146 (222)
Q Consensus 144 ~pp 146 (222)
-.+
T Consensus 75 ~t~ 77 (461)
T 4g65_A 75 VTN 77 (461)
T ss_dssp CCS
T ss_pred EcC
Confidence 543
No 367
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=86.94 E-value=2.8 Score=34.72 Aligned_cols=92 Identities=8% Similarity=-0.000 Sum_probs=54.8
Q ss_pred CCCeEEEEecc-cchhHHHHhh-cCC-eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeC-----chhchhhhcCCCCCCC
Q 043853 67 GSEIVLDLFCG-TGTIGLTLAR-WVK-HVYGYEVVPQAISDACRNAKLNNISNATFVQG-----DLNKIGGDFGNAFPKP 138 (222)
Q Consensus 67 ~~~~vlDlg~G-~G~~~~~la~-~~~-~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~-----d~~~~~~~~~~~~~~f 138 (222)
++++||-+|+| .|..++.+|+ .+. +|+++|.++...+.+++ .|.+. ++.. |+.+...... . +.+
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~~--vi~~~~~~~~~~~~i~~~t-~-gg~ 262 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE----LGATE--CLNPKDYDKPIYEVICEKT-N-GGV 262 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----TTCSE--EECGGGCSSCHHHHHHHHT-T-SCB
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH----cCCcE--EEecccccchHHHHHHHHh-C-CCC
Confidence 47899999976 3555556665 355 89999999888877754 46542 2221 2222222221 1 269
Q ss_pred cEEEECCCCCCccHHHHHHHHhCCCC-cEEEE
Q 043853 139 DIVISDPNRPGMHMKLIKFLLKLKAP-RIVYV 169 (222)
Q Consensus 139 D~ii~~pp~~~~~~~~~~~l~~l~~~-~~v~~ 169 (222)
|+||-... ....+...+..++++ |.+..
T Consensus 263 Dvvid~~g---~~~~~~~~~~~l~~~~G~iv~ 291 (373)
T 1p0f_A 263 DYAVECAG---RIETMMNALQSTYCGSGVTVV 291 (373)
T ss_dssp SEEEECSC---CHHHHHHHHHTBCTTTCEEEE
T ss_pred CEEEECCC---CHHHHHHHHHHHhcCCCEEEE
Confidence 99987542 223445556667877 66553
No 368
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=86.89 E-value=3.2 Score=34.27 Aligned_cols=93 Identities=14% Similarity=0.020 Sum_probs=55.1
Q ss_pred CCCeEEEEe--cccchhHHHHhh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCcE-EEEeCchhchhhhcCCCCCCCcEEE
Q 043853 67 GSEIVLDLF--CGTGTIGLTLAR-WVKHVYGYEVVPQAISDACRNAKLNNISNA-TFVQGDLNKIGGDFGNAFPKPDIVI 142 (222)
Q Consensus 67 ~~~~vlDlg--~G~G~~~~~la~-~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v-~~~~~d~~~~~~~~~~~~~~fD~ii 142 (222)
++++||-.| .|.|..++.+++ .+.+|++++.+++.++.+++ .|.+.+ .....|+.+...... ...+|+++
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~----~Ga~~~~~~~~~~~~~~~~~~~--~~g~D~vi 236 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS----LGCDRPINYKTEPVGTVLKQEY--PEGVDVVY 236 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCSEEEETTTSCHHHHHHHHC--TTCEEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----cCCcEEEecCChhHHHHHHHhc--CCCCCEEE
Confidence 478999999 346767776665 35699999999888887765 455421 111122222222211 13689998
Q ss_pred ECCCCCCccHHHHHHHHhCCCCcEEEE
Q 043853 143 SDPNRPGMHMKLIKFLLKLKAPRIVYV 169 (222)
Q Consensus 143 ~~pp~~~~~~~~~~~l~~l~~~~~v~~ 169 (222)
-.... ..+...+..++++|.+..
T Consensus 237 d~~g~----~~~~~~~~~l~~~G~iv~ 259 (362)
T 2c0c_A 237 ESVGG----AMFDLAVDALATKGRLIV 259 (362)
T ss_dssp ECSCT----HHHHHHHHHEEEEEEEEE
T ss_pred ECCCH----HHHHHHHHHHhcCCEEEE
Confidence 76531 344445555676665543
No 369
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=86.87 E-value=2.3 Score=34.75 Aligned_cols=97 Identities=9% Similarity=0.011 Sum_probs=56.6
Q ss_pred CCCCeEEEEeccc-chhHHHHhhc--CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEE
Q 043853 66 DGSEIVLDLFCGT-GTIGLTLARW--VKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVI 142 (222)
Q Consensus 66 ~~~~~vlDlg~G~-G~~~~~la~~--~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii 142 (222)
.++++||=.|+|. |..++.+++. +.+|+++|.+++..+.+++ .|.+.+--...|..+...... ....+|+++
T Consensus 170 ~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~~~~v~~~t-~g~g~d~v~ 244 (345)
T 3jv7_A 170 GPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALARE----VGADAAVKSGAGAADAIRELT-GGQGATAVF 244 (345)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH----TTCSEEEECSTTHHHHHHHHH-GGGCEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCCCEEEcCCCcHHHHHHHHh-CCCCCeEEE
Confidence 3578999998863 5566666653 5699999999998887764 466532111122222211111 113689988
Q ss_pred ECCCCCCccHHHHHHHHhCCCCcEEEEe
Q 043853 143 SDPNRPGMHMKLIKFLLKLKAPRIVYVS 170 (222)
Q Consensus 143 ~~pp~~~~~~~~~~~l~~l~~~~~v~~~ 170 (222)
-... -...+...+..++++|.+.+.
T Consensus 245 d~~G---~~~~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 245 DFVG---AQSTIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp ESSC---CHHHHHHHHHHEEEEEEEEEC
T ss_pred ECCC---CHHHHHHHHHHHhcCCEEEEE
Confidence 7643 222444555556776665543
No 370
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=86.83 E-value=7.4 Score=30.18 Aligned_cols=76 Identities=13% Similarity=0.149 Sum_probs=47.3
Q ss_pred CCeEEEEecccchhHHHH----hhcCCeEEEEeCCHHHHHHHHHHHHHc-CCCcEEEEeCchhchhh------hcCCCCC
Q 043853 68 SEIVLDLFCGTGTIGLTL----ARWVKHVYGYEVVPQAISDACRNAKLN-NISNATFVQGDLNKIGG------DFGNAFP 136 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~l----a~~~~~v~gvD~~~~~i~~a~~n~~~~-~~~~v~~~~~d~~~~~~------~~~~~~~ 136 (222)
++++|=.|+ +|+++..+ ++.+.+|+.++.++...+.+.+.+... .-.++.++.+|+.+... ......+
T Consensus 7 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (260)
T 2z1n_A 7 GKLAVVTAG-SSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG 85 (260)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCEEEEECC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 456666664 45555544 445779999999988777666555432 11158888899865421 1111223
Q ss_pred CCcEEEECC
Q 043853 137 KPDIVISDP 145 (222)
Q Consensus 137 ~fD~ii~~p 145 (222)
.|++|.+.
T Consensus 86 -id~lv~~A 93 (260)
T 2z1n_A 86 -ADILVYST 93 (260)
T ss_dssp -CSEEEECC
T ss_pred -CCEEEECC
Confidence 89999875
No 371
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=86.59 E-value=2.5 Score=35.49 Aligned_cols=98 Identities=10% Similarity=0.005 Sum_probs=54.5
Q ss_pred CCCCeEEEEecc-cchhHHHHhhc-CC-eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEe---CchhchhhhcCCCCCCCc
Q 043853 66 DGSEIVLDLFCG-TGTIGLTLARW-VK-HVYGYEVVPQAISDACRNAKLNNISNATFVQ---GDLNKIGGDFGNAFPKPD 139 (222)
Q Consensus 66 ~~~~~vlDlg~G-~G~~~~~la~~-~~-~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~---~d~~~~~~~~~~~~~~fD 139 (222)
.++++||=.|+| .|..++.+|+. +. +|+++|.++...+.+++ .|.+ .++. .|+.+....+. ....+|
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~----lGa~--~vi~~~~~~~~~~i~~~t-~g~g~D 284 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKE----LGAD--HVIDPTKENFVEAVLDYT-NGLGAK 284 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH----HTCS--EEECTTTSCHHHHHHHHT-TTCCCS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----cCCC--EEEcCCCCCHHHHHHHHh-CCCCCC
Confidence 457889889875 24455555653 44 89999999998888865 3554 2232 23322222221 223699
Q ss_pred EEEECCCCC-CccHHHHHHH-HhCCCCcEEEEe
Q 043853 140 IVISDPNRP-GMHMKLIKFL-LKLKAPRIVYVS 170 (222)
Q Consensus 140 ~ii~~pp~~-~~~~~~~~~l-~~l~~~~~v~~~ 170 (222)
++|-..... .....+.+.+ ..++++|.+.+.
T Consensus 285 ~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~ 317 (404)
T 3ip1_A 285 LFLEATGVPQLVWPQIEEVIWRARGINATVAIV 317 (404)
T ss_dssp EEEECSSCHHHHHHHHHHHHHHCSCCCCEEEEC
T ss_pred EEEECCCCcHHHHHHHHHHHHhccCCCcEEEEe
Confidence 998754321 0122333333 223777766543
No 372
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=86.51 E-value=12 Score=30.59 Aligned_cols=96 Identities=14% Similarity=-0.033 Sum_probs=56.3
Q ss_pred CCCeEEEEeccc-chhHHHHhhc-CC-eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEe-----CchhchhhhcCCCCCCC
Q 043853 67 GSEIVLDLFCGT-GTIGLTLARW-VK-HVYGYEVVPQAISDACRNAKLNNISNATFVQ-----GDLNKIGGDFGNAFPKP 138 (222)
Q Consensus 67 ~~~~vlDlg~G~-G~~~~~la~~-~~-~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~-----~d~~~~~~~~~~~~~~f 138 (222)
++++||=.|+|. |..++.+|+. +. .|+++|.+++..+.+++. . ..-+.+.. .|+.+...... ....+
T Consensus 179 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~---~~~~~~~~~~~~~~~~~~~v~~~t-~g~g~ 253 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-C---PEVVTHKVERLSAEESAKKIVESF-GGIEP 253 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-C---TTCEEEECCSCCHHHHHHHHHHHT-SSCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-c---hhcccccccccchHHHHHHHHHHh-CCCCC
Confidence 478888888753 5566666653 44 499999999999998875 1 11133321 12222221111 12469
Q ss_pred cEEEECCCCCCccHHHHHHHHhCCCCcEEEEe
Q 043853 139 DIVISDPNRPGMHMKLIKFLLKLKAPRIVYVS 170 (222)
Q Consensus 139 D~ii~~pp~~~~~~~~~~~l~~l~~~~~v~~~ 170 (222)
|+++-... -...+...+..++++|.+.+.
T Consensus 254 Dvvid~~g---~~~~~~~~~~~l~~~G~iv~~ 282 (363)
T 3m6i_A 254 AVALECTG---VESSIAAAIWAVKFGGKVFVI 282 (363)
T ss_dssp SEEEECSC---CHHHHHHHHHHSCTTCEEEEC
T ss_pred CEEEECCC---ChHHHHHHHHHhcCCCEEEEE
Confidence 99987543 222345566667887776643
No 373
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=86.30 E-value=1.7 Score=35.49 Aligned_cols=94 Identities=13% Similarity=-0.007 Sum_probs=55.1
Q ss_pred CCCeEEEEec--ccchhHHHHhh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhhhcCCCCCCCcEEE
Q 043853 67 GSEIVLDLFC--GTGTIGLTLAR-WVKHVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGDFGNAFPKPDIVI 142 (222)
Q Consensus 67 ~~~~vlDlg~--G~G~~~~~la~-~~~~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~~~~~~~fD~ii 142 (222)
++++||-.|+ |.|..++.+++ .+.+|++++.+++..+.+.+ ..|.+. +.....|..+...... ...+|+++
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~--~~~~d~vi 223 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVE---ELGFDGAIDYKNEDLAAGLKREC--PKGIDVFF 223 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---TTCCSEEEETTTSCHHHHHHHHC--TTCEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HcCCCEEEECCCHHHHHHHHHhc--CCCceEEE
Confidence 4889999998 45666666554 45699999999987777632 235532 1111223322222222 13699998
Q ss_pred ECCCCCCccHHHHHHHHhCCCCcEEEE
Q 043853 143 SDPNRPGMHMKLIKFLLKLKAPRIVYV 169 (222)
Q Consensus 143 ~~pp~~~~~~~~~~~l~~l~~~~~v~~ 169 (222)
-+.. ...+...+..++++|.+.+
T Consensus 224 ~~~g----~~~~~~~~~~l~~~G~iv~ 246 (336)
T 4b7c_A 224 DNVG----GEILDTVLTRIAFKARIVL 246 (336)
T ss_dssp ESSC----HHHHHHHHTTEEEEEEEEE
T ss_pred ECCC----cchHHHHHHHHhhCCEEEE
Confidence 7643 1344445555677776654
No 374
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=86.22 E-value=3.3 Score=34.25 Aligned_cols=93 Identities=8% Similarity=0.030 Sum_probs=54.6
Q ss_pred CCCCeEEEEeccc-chhHHHHhhc-CC-eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeC-----chhchhhhcCCCCCC
Q 043853 66 DGSEIVLDLFCGT-GTIGLTLARW-VK-HVYGYEVVPQAISDACRNAKLNNISNATFVQG-----DLNKIGGDFGNAFPK 137 (222)
Q Consensus 66 ~~~~~vlDlg~G~-G~~~~~la~~-~~-~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~-----d~~~~~~~~~~~~~~ 137 (222)
.++++||-.|+|. |..++.+++. +. +|+++|.+++..+.+++ .|.+. ++.. ++.+...... . ..
T Consensus 190 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~~--vi~~~~~~~~~~~~~~~~~-~-~g 261 (374)
T 2jhf_A 190 TQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE----VGATE--CVNPQDYKKPIQEVLTEMS-N-GG 261 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCSE--EECGGGCSSCHHHHHHHHT-T-SC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCCce--EecccccchhHHHHHHHHh-C-CC
Confidence 3478999999753 5555566653 44 89999999888887753 45542 2221 2222222221 1 26
Q ss_pred CcEEEECCCCCCccHHHHHHHHhCCCC-cEEEE
Q 043853 138 PDIVISDPNRPGMHMKLIKFLLKLKAP-RIVYV 169 (222)
Q Consensus 138 fD~ii~~pp~~~~~~~~~~~l~~l~~~-~~v~~ 169 (222)
+|+++-... ....+...+..++++ |.+.+
T Consensus 262 ~D~vid~~g---~~~~~~~~~~~l~~~~G~iv~ 291 (374)
T 2jhf_A 262 VDFSFEVIG---RLDTMVTALSCCQEAYGVSVI 291 (374)
T ss_dssp BSEEEECSC---CHHHHHHHHHHBCTTTCEEEE
T ss_pred CcEEEECCC---CHHHHHHHHHHhhcCCcEEEE
Confidence 999987643 123445556667877 66543
No 375
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=86.07 E-value=1.9 Score=32.30 Aligned_cols=90 Identities=16% Similarity=0.124 Sum_probs=53.9
Q ss_pred eEEEEecccchhHHHHh----hcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECC
Q 043853 70 IVLDLFCGTGTIGLTLA----RWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDP 145 (222)
Q Consensus 70 ~vlDlg~G~G~~~~~la----~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~p 145 (222)
+||=.| |+|.++..++ +.+.+|++++.++...+... ++++++.+|+.+..... ...+|+||...
T Consensus 2 kvlVtG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--------~~~~~~~~D~~d~~~~~---~~~~d~vi~~a 69 (221)
T 3ew7_A 2 KIGIIG-ATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--------KDINILQKDIFDLTLSD---LSDQNVVVDAY 69 (221)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--------SSSEEEECCGGGCCHHH---HTTCSEEEECC
T ss_pred eEEEEc-CCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--------CCCeEEeccccChhhhh---hcCCCEEEECC
Confidence 455444 5666666544 34679999999976544321 45889999998764321 13689998875
Q ss_pred CCC--C------ccHHHHHHHHhCCCCcEEEEee
Q 043853 146 NRP--G------MHMKLIKFLLKLKAPRIVYVSC 171 (222)
Q Consensus 146 p~~--~------~~~~~~~~l~~l~~~~~v~~~~ 171 (222)
... . ....+++.+...+.+.++++++
T Consensus 70 g~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS 103 (221)
T 3ew7_A 70 GISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGG 103 (221)
T ss_dssp CSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred cCCccccchHHHHHHHHHHHHHhcCCceEEEEec
Confidence 321 1 1134444444444567777765
No 376
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=86.03 E-value=2.9 Score=34.63 Aligned_cols=93 Identities=9% Similarity=0.026 Sum_probs=54.8
Q ss_pred CCCCeEEEEecc-cchhHHHHhhc-CC-eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeC-----chhchhhhcCCCCCC
Q 043853 66 DGSEIVLDLFCG-TGTIGLTLARW-VK-HVYGYEVVPQAISDACRNAKLNNISNATFVQG-----DLNKIGGDFGNAFPK 137 (222)
Q Consensus 66 ~~~~~vlDlg~G-~G~~~~~la~~-~~-~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~-----d~~~~~~~~~~~~~~ 137 (222)
.++++||-.|+| .|..++.+|+. +. +|+++|.++..++.+++ .|.+. ++.. ++.+...... . +.
T Consensus 191 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~~--vi~~~~~~~~~~~~~~~~~-~-~g 262 (374)
T 1cdo_A 191 EPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV----FGATD--FVNPNDHSEPISQVLSKMT-N-GG 262 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCCE--EECGGGCSSCHHHHHHHHH-T-SC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----hCCce--EEeccccchhHHHHHHHHh-C-CC
Confidence 347899999875 25555566653 44 89999999988887764 45542 2211 2222221111 1 26
Q ss_pred CcEEEECCCCCCccHHHHHHHHhCCCC-cEEEE
Q 043853 138 PDIVISDPNRPGMHMKLIKFLLKLKAP-RIVYV 169 (222)
Q Consensus 138 fD~ii~~pp~~~~~~~~~~~l~~l~~~-~~v~~ 169 (222)
+|++|-... ....+...+..++++ |.+..
T Consensus 263 ~D~vid~~g---~~~~~~~~~~~l~~~~G~iv~ 292 (374)
T 1cdo_A 263 VDFSLECVG---NVGVMRNALESCLKGWGVSVL 292 (374)
T ss_dssp BSEEEECSC---CHHHHHHHHHTBCTTTCEEEE
T ss_pred CCEEEECCC---CHHHHHHHHHHhhcCCcEEEE
Confidence 999987643 223445556667877 66553
No 377
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=85.87 E-value=1.8 Score=35.94 Aligned_cols=91 Identities=18% Similarity=0.110 Sum_probs=52.6
Q ss_pred CCCCeEEEEeccc-chhHHHHhh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEE
Q 043853 66 DGSEIVLDLFCGT-GTIGLTLAR-WVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVIS 143 (222)
Q Consensus 66 ~~~~~vlDlg~G~-G~~~~~la~-~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~ 143 (222)
.++++||-.|+|. |..++.+|+ .+.+|+++|.++..++.+++ .|.+. ++..+-.++..... ..+|++|-
T Consensus 193 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~----lGa~~--vi~~~~~~~~~~~~---~g~Dvvid 263 (369)
T 1uuf_A 193 GPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA----LGADE--VVNSRNADEMAAHL---KSFDFILN 263 (369)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----HTCSE--EEETTCHHHHHTTT---TCEEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCcE--EeccccHHHHHHhh---cCCCEEEE
Confidence 3578999999863 556666665 35689999999988888765 35542 22221112222211 36899887
Q ss_pred CCCCCCccHHHHHHHHhCCCCcEEE
Q 043853 144 DPNRPGMHMKLIKFLLKLKAPRIVY 168 (222)
Q Consensus 144 ~pp~~~~~~~~~~~l~~l~~~~~v~ 168 (222)
....... +...+..++++|.+.
T Consensus 264 ~~g~~~~---~~~~~~~l~~~G~iv 285 (369)
T 1uuf_A 264 TVAAPHN---LDDFTTLLKRDGTMT 285 (369)
T ss_dssp CCSSCCC---HHHHHTTEEEEEEEE
T ss_pred CCCCHHH---HHHHHHHhccCCEEE
Confidence 6542222 233344456665544
No 378
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=85.73 E-value=0.9 Score=36.58 Aligned_cols=77 Identities=23% Similarity=0.150 Sum_probs=50.9
Q ss_pred CCeEEEEecccchhHHH----HhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh------hcCCCCCC
Q 043853 68 SEIVLDLFCGTGTIGLT----LARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG------DFGNAFPK 137 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~----la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~------~~~~~~~~ 137 (222)
++++|=.|+ +|+++.. +++.+.+|+.++.++..++.+.+.+...+..++.++.+|+.+... ......+.
T Consensus 41 ~k~vlVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 119 (293)
T 3rih_A 41 ARSVLVTGG-TKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGA 119 (293)
T ss_dssp TCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence 566666665 4555544 445577999999998887777776665554468999999876421 11111236
Q ss_pred CcEEEECC
Q 043853 138 PDIVISDP 145 (222)
Q Consensus 138 fD~ii~~p 145 (222)
.|++|.+.
T Consensus 120 iD~lvnnA 127 (293)
T 3rih_A 120 LDVVCANA 127 (293)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999875
No 379
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=85.70 E-value=3.2 Score=34.28 Aligned_cols=93 Identities=8% Similarity=-0.004 Sum_probs=54.9
Q ss_pred CCCCeEEEEeccc-chhHHHHhh-cCC-eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEe-----CchhchhhhcCCCCCC
Q 043853 66 DGSEIVLDLFCGT-GTIGLTLAR-WVK-HVYGYEVVPQAISDACRNAKLNNISNATFVQ-----GDLNKIGGDFGNAFPK 137 (222)
Q Consensus 66 ~~~~~vlDlg~G~-G~~~~~la~-~~~-~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~-----~d~~~~~~~~~~~~~~ 137 (222)
.++++||-.|+|. |..++.+|+ .+. +|+++|.+++..+.+++ .|.+. ++. .|+.+...... . ..
T Consensus 189 ~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~~--vi~~~~~~~~~~~~v~~~~-~-~g 260 (373)
T 2fzw_A 189 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE----FGATE--CINPQDFSKPIQEVLIEMT-D-GG 260 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----HTCSE--EECGGGCSSCHHHHHHHHT-T-SC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----cCCce--EeccccccccHHHHHHHHh-C-CC
Confidence 3478999998752 555555555 355 89999999988888764 35542 222 12222222221 1 26
Q ss_pred CcEEEECCCCCCccHHHHHHHHhCCCC-cEEEE
Q 043853 138 PDIVISDPNRPGMHMKLIKFLLKLKAP-RIVYV 169 (222)
Q Consensus 138 fD~ii~~pp~~~~~~~~~~~l~~l~~~-~~v~~ 169 (222)
+|+++-... ....+...+..++++ |.+.+
T Consensus 261 ~D~vid~~g---~~~~~~~~~~~l~~~~G~iv~ 290 (373)
T 2fzw_A 261 VDYSFECIG---NVKVMRAALEACHKGWGVSVV 290 (373)
T ss_dssp BSEEEECSC---CHHHHHHHHHTBCTTTCEEEE
T ss_pred CCEEEECCC---cHHHHHHHHHhhccCCcEEEE
Confidence 999987643 223445556667877 66553
No 380
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=85.32 E-value=8.8 Score=31.26 Aligned_cols=100 Identities=18% Similarity=0.196 Sum_probs=60.3
Q ss_pred CCeEEEEecccchhHHHHh----hc-CC-eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEE
Q 043853 68 SEIVLDLFCGTGTIGLTLA----RW-VK-HVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIV 141 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la----~~-~~-~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~i 141 (222)
+++||=. .|+|.++..++ +. +. +|++++.++.......+.+. ..+++++.+|+.+...- ......+|+|
T Consensus 21 ~k~vlVT-GatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~---~~~v~~~~~Dl~d~~~l-~~~~~~~D~V 95 (344)
T 2gn4_A 21 NQTILIT-GGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN---DPRMRFFIGDVRDLERL-NYALEGVDIC 95 (344)
T ss_dssp TCEEEEE-TTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC---CTTEEEEECCTTCHHHH-HHHTTTCSEE
T ss_pred CCEEEEE-CCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc---CCCEEEEECCCCCHHHH-HHHHhcCCEE
Confidence 5667754 46787776554 34 55 99999999876655544332 23589999998765321 1011368999
Q ss_pred EECCCCCCcc-----------------HHHHHHHHhCCCCcEEEEeeC
Q 043853 142 ISDPNRPGMH-----------------MKLIKFLLKLKAPRIVYVSCN 172 (222)
Q Consensus 142 i~~pp~~~~~-----------------~~~~~~l~~l~~~~~v~~~~~ 172 (222)
|......... ..+++.+.....+.++++|+.
T Consensus 96 ih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~ 143 (344)
T 2gn4_A 96 IHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTD 143 (344)
T ss_dssp EECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCG
T ss_pred EECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCC
Confidence 9876422210 123333444456688888874
No 381
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=85.22 E-value=3.3 Score=34.32 Aligned_cols=93 Identities=8% Similarity=-0.021 Sum_probs=54.6
Q ss_pred CCCCeEEEEecc-cchhHHHHhhc-CC-eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEe-----CchhchhhhcCCCCCC
Q 043853 66 DGSEIVLDLFCG-TGTIGLTLARW-VK-HVYGYEVVPQAISDACRNAKLNNISNATFVQ-----GDLNKIGGDFGNAFPK 137 (222)
Q Consensus 66 ~~~~~vlDlg~G-~G~~~~~la~~-~~-~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~-----~d~~~~~~~~~~~~~~ 137 (222)
.++++||-.|+| .|..++.+|+. +. +|+++|.+++..+.+++ .|.+. ++. .|+.+...... . ..
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~~--vi~~~~~~~~~~~~v~~~~-~-~g 265 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA----LGATD--CLNPRELDKPVQDVITELT-A-GG 265 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCSE--EECGGGCSSCHHHHHHHHH-T-SC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCCcE--EEccccccchHHHHHHHHh-C-CC
Confidence 347899999976 35555566653 44 89999999888877753 46542 221 12222221111 1 26
Q ss_pred CcEEEECCCCCCccHHHHHHHHhCCCC-cEEEE
Q 043853 138 PDIVISDPNRPGMHMKLIKFLLKLKAP-RIVYV 169 (222)
Q Consensus 138 fD~ii~~pp~~~~~~~~~~~l~~l~~~-~~v~~ 169 (222)
+|++|-... ....+...+..++++ |.+.+
T Consensus 266 ~Dvvid~~G---~~~~~~~~~~~l~~~~G~iv~ 295 (376)
T 1e3i_A 266 VDYSLDCAG---TAQTLKAAVDCTVLGWGSCTV 295 (376)
T ss_dssp BSEEEESSC---CHHHHHHHHHTBCTTTCEEEE
T ss_pred ccEEEECCC---CHHHHHHHHHHhhcCCCEEEE
Confidence 999987542 223445556667877 66543
No 382
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=85.15 E-value=5.4 Score=32.41 Aligned_cols=98 Identities=9% Similarity=0.029 Sum_probs=56.1
Q ss_pred CCCCeEEEEeccc-chhHHHHhhc--CCeEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhhhcCCCCCCCcEE
Q 043853 66 DGSEIVLDLFCGT-GTIGLTLARW--VKHVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGDFGNAFPKPDIV 141 (222)
Q Consensus 66 ~~~~~vlDlg~G~-G~~~~~la~~--~~~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~~~~~~~fD~i 141 (222)
.++++||=.|+|. |.+++.+++. ...++++|.+++-++.+++ .|.+. +.....|..+....+. ....+|++
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~----lGa~~~i~~~~~~~~~~~~~~~-~~~g~d~v 233 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKS----FGAMQTFNSSEMSAPQMQSVLR-ELRFNQLI 233 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCSEEEETTTSCHHHHHHHHG-GGCSSEEE
T ss_pred CCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHH----cCCeEEEeCCCCCHHHHHHhhc-ccCCcccc
Confidence 4588999998874 3344455553 3478899999988777764 56643 2222233333322211 12357887
Q ss_pred EECCCCCCccHHHHHHHHhCCCCcEEEEee
Q 043853 142 ISDPNRPGMHMKLIKFLLKLKAPRIVYVSC 171 (222)
Q Consensus 142 i~~pp~~~~~~~~~~~l~~l~~~~~v~~~~ 171 (222)
+-.- +....+...+..+++++.+.+..
T Consensus 234 ~d~~---G~~~~~~~~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 234 LETA---GVPQTVELAVEIAGPHAQLALVG 260 (346)
T ss_dssp EECS---CSHHHHHHHHHHCCTTCEEEECC
T ss_pred cccc---cccchhhhhhheecCCeEEEEEe
Confidence 7643 22234444566678877766443
No 383
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=85.12 E-value=1.8 Score=36.16 Aligned_cols=94 Identities=16% Similarity=0.056 Sum_probs=54.8
Q ss_pred CCCCeEEEEecc-cchhHHHHhhc-C-CeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeC------chhchhhhcCCCCC
Q 043853 66 DGSEIVLDLFCG-TGTIGLTLARW-V-KHVYGYEVVPQAISDACRNAKLNNISNATFVQG------DLNKIGGDFGNAFP 136 (222)
Q Consensus 66 ~~~~~vlDlg~G-~G~~~~~la~~-~-~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~------d~~~~~~~~~~~~~ 136 (222)
.++++||-.|+| .|..++.+|+. + .+|++++.+++.++.+++ .|.+. ++.. |+.+...... ...
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~----lGa~~--vi~~~~~~~~~~~~~v~~~~-~g~ 266 (380)
T 1vj0_A 194 FAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE----IGADL--TLNRRETSVEERRKAIMDIT-HGR 266 (380)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH----TTCSE--EEETTTSCHHHHHHHHHHHT-TTS
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH----cCCcE--EEeccccCcchHHHHHHHHh-CCC
Confidence 357899999965 45555666653 5 599999999988887763 46542 2222 2211111111 123
Q ss_pred CCcEEEECCCCCCccHHHHHHHHhCCCCcEEEE
Q 043853 137 KPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYV 169 (222)
Q Consensus 137 ~fD~ii~~pp~~~~~~~~~~~l~~l~~~~~v~~ 169 (222)
.+|++|-..... ..+...+..++++|.+..
T Consensus 267 g~Dvvid~~g~~---~~~~~~~~~l~~~G~iv~ 296 (380)
T 1vj0_A 267 GADFILEATGDS---RALLEGSELLRRGGFYSV 296 (380)
T ss_dssp CEEEEEECSSCT---THHHHHHHHEEEEEEEEE
T ss_pred CCcEEEECCCCH---HHHHHHHHHHhcCCEEEE
Confidence 699998765322 233444555677666553
No 384
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=85.07 E-value=1.9 Score=36.19 Aligned_cols=98 Identities=11% Similarity=-0.020 Sum_probs=55.7
Q ss_pred CCCCeEEEEeccc-chhHHHHhh-cCC-eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCch-hchhhhcCCCCCCCcEE
Q 043853 66 DGSEIVLDLFCGT-GTIGLTLAR-WVK-HVYGYEVVPQAISDACRNAKLNNISNATFVQGDL-NKIGGDFGNAFPKPDIV 141 (222)
Q Consensus 66 ~~~~~vlDlg~G~-G~~~~~la~-~~~-~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~-~~~~~~~~~~~~~fD~i 141 (222)
.++++||-+|||. |.+++.+|+ .+. +|+++|.++..++.+++ .|.+-+.....|. .+...... ....+|++
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~~i~~~~~~~~~~~~~~~~-~g~g~Dvv 258 (398)
T 2dph_A 184 KPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD----AGFETIDLRNSAPLRDQIDQIL-GKPEVDCG 258 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT----TTCEEEETTSSSCHHHHHHHHH-SSSCEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCCcEEcCCCcchHHHHHHHHh-CCCCCCEE
Confidence 3488999999864 666776665 355 89999999998887754 4542111111222 11111111 11269999
Q ss_pred EECCCCCCc-----------cHHHHHHHHhCCCCcEEE
Q 043853 142 ISDPNRPGM-----------HMKLIKFLLKLKAPRIVY 168 (222)
Q Consensus 142 i~~pp~~~~-----------~~~~~~~l~~l~~~~~v~ 168 (222)
|-....... ...+...+..++++|.+.
T Consensus 259 id~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv 296 (398)
T 2dph_A 259 VDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIG 296 (398)
T ss_dssp EECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEE
T ss_pred EECCCCccccccccccccccHHHHHHHHHHHhcCCEEE
Confidence 876532210 123445556667777654
No 385
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=85.00 E-value=9.7 Score=29.96 Aligned_cols=76 Identities=17% Similarity=0.163 Sum_probs=48.3
Q ss_pred CCeEEEEecccchhHHHHhh----cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhh------cCCCCCC
Q 043853 68 SEIVLDLFCGTGTIGLTLAR----WVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGD------FGNAFPK 137 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~----~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~------~~~~~~~ 137 (222)
++++|=.| |+|+++..+++ .+.+|+.++.++...+.+.+.++..+. ++.++.+|+.+...- .....+.
T Consensus 44 ~k~vlITG-asggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~~~~~~ 121 (285)
T 2c07_A 44 NKVALVTG-AGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGY-ESSGYAGDVSKKEEISEVINKILTEHKN 121 (285)
T ss_dssp SCEEEEES-TTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCC-ceeEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 45666555 55666665553 456899999888877766666654443 488888988654211 0011136
Q ss_pred CcEEEECC
Q 043853 138 PDIVISDP 145 (222)
Q Consensus 138 fD~ii~~p 145 (222)
+|++|.+.
T Consensus 122 id~li~~A 129 (285)
T 2c07_A 122 VDILVNNA 129 (285)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999875
No 386
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=84.91 E-value=1.5 Score=36.05 Aligned_cols=88 Identities=16% Similarity=0.052 Sum_probs=53.7
Q ss_pred CCCCeEEEEeccc-chhHHHHhh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEE
Q 043853 66 DGSEIVLDLFCGT-GTIGLTLAR-WVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVIS 143 (222)
Q Consensus 66 ~~~~~vlDlg~G~-G~~~~~la~-~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~ 143 (222)
.++++||-.|+|. |..++.+++ .+.+|+++|.+++..+.+++ .|.+.+ + .+...+ . ..+|+++-
T Consensus 175 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~v--~-~~~~~~----~---~~~D~vid 240 (348)
T 3two_A 175 TKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS----MGVKHF--Y-TDPKQC----K---EELDFIIS 240 (348)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH----TTCSEE--E-SSGGGC----C---SCEEEEEE
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh----cCCCee--c-CCHHHH----h---cCCCEEEE
Confidence 3578999998763 555566665 35699999999988887754 566532 2 333222 1 16899987
Q ss_pred CCCCCCccHHHHHHHHhCCCCcEEEEe
Q 043853 144 DPNRPGMHMKLIKFLLKLKAPRIVYVS 170 (222)
Q Consensus 144 ~pp~~~~~~~~~~~l~~l~~~~~v~~~ 170 (222)
...... .+...+..++++|.+.+.
T Consensus 241 ~~g~~~---~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 241 TIPTHY---DLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp CCCSCC---CHHHHHTTEEEEEEEEEC
T ss_pred CCCcHH---HHHHHHHHHhcCCEEEEE
Confidence 654322 233444455666665543
No 387
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=84.85 E-value=2 Score=35.09 Aligned_cols=92 Identities=10% Similarity=-0.023 Sum_probs=52.7
Q ss_pred CCCeEEEEecc-cchhHHHHhh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCcE-EEEeCchhchhhhcCCCCCCCcEEEE
Q 043853 67 GSEIVLDLFCG-TGTIGLTLAR-WVKHVYGYEVVPQAISDACRNAKLNNISNA-TFVQGDLNKIGGDFGNAFPKPDIVIS 143 (222)
Q Consensus 67 ~~~~vlDlg~G-~G~~~~~la~-~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v-~~~~~d~~~~~~~~~~~~~~fD~ii~ 143 (222)
++++||-.|+| .|..++.+++ .+.+|+++|.++..++.+++ .|.+.+ .....|+.+...... ..+|+++-
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~~~d~~~~~~~~~~~~~~---~~~d~vid 236 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE----LGADLVVNPLKEDAAKFMKEKV---GGVHAAVV 236 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TTCSEEECTTTSCHHHHHHHHH---SSEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----CCCCEEecCCCccHHHHHHHHh---CCCCEEEE
Confidence 47899999985 3555555554 35699999999998887754 455421 111112221111111 25899987
Q ss_pred CCCCCCccHHHHHHHHhCCCCcEEE
Q 043853 144 DPNRPGMHMKLIKFLLKLKAPRIVY 168 (222)
Q Consensus 144 ~pp~~~~~~~~~~~l~~l~~~~~v~ 168 (222)
... ....+...+..++++|.+.
T Consensus 237 ~~g---~~~~~~~~~~~l~~~G~~v 258 (339)
T 1rjw_A 237 TAV---SKPAFQSAYNSIRRGGACV 258 (339)
T ss_dssp SSC---CHHHHHHHHHHEEEEEEEE
T ss_pred CCC---CHHHHHHHHHHhhcCCEEE
Confidence 643 2233444555566666554
No 388
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=84.66 E-value=3.3 Score=32.36 Aligned_cols=77 Identities=18% Similarity=0.051 Sum_probs=51.8
Q ss_pred CCeEEEEecccchhHHHH----hhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh------hcCCCCCC
Q 043853 68 SEIVLDLFCGTGTIGLTL----ARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG------DFGNAFPK 137 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~l----a~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~------~~~~~~~~ 137 (222)
++++|=.|+ +|+++..+ ++.+.+|+.++.++..++.+.+.++..+..++.++.+|+.+... ......+.
T Consensus 10 ~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 88 (262)
T 3pk0_A 10 GRSVVVTGG-TKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGG 88 (262)
T ss_dssp TCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 566666664 45555544 45577999999999988888777766554468999999866431 11111136
Q ss_pred CcEEEECC
Q 043853 138 PDIVISDP 145 (222)
Q Consensus 138 fD~ii~~p 145 (222)
.|+++.+.
T Consensus 89 id~lvnnA 96 (262)
T 3pk0_A 89 IDVVCANA 96 (262)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 89999875
No 389
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=84.57 E-value=13 Score=29.18 Aligned_cols=74 Identities=8% Similarity=-0.007 Sum_probs=46.6
Q ss_pred CeEEEEecccchhHH----HHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh------hcCCCCCCC
Q 043853 69 EIVLDLFCGTGTIGL----TLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG------DFGNAFPKP 138 (222)
Q Consensus 69 ~~vlDlg~G~G~~~~----~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~------~~~~~~~~f 138 (222)
+++|=.|+ +|+++. .+++.+.+|+.++.++..++.+.+.+... .++.++.+|+.+... ......+..
T Consensus 22 k~vlVTGa-s~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 98 (272)
T 2nwq_A 22 STLFITGA-TSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK--TRVLPLTLDVRDRAAMSAAVDNLPEEFATL 98 (272)
T ss_dssp CEEEESST-TTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT--SCEEEEECCTTCHHHHHHHHHTCCGGGSSC
T ss_pred cEEEEeCC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 46666665 444444 44455779999999988777665554322 358889999865421 111122468
Q ss_pred cEEEECC
Q 043853 139 DIVISDP 145 (222)
Q Consensus 139 D~ii~~p 145 (222)
|++|.+.
T Consensus 99 D~lvnnA 105 (272)
T 2nwq_A 99 RGLINNA 105 (272)
T ss_dssp CEEEECC
T ss_pred CEEEECC
Confidence 9999875
No 390
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=84.57 E-value=1.2 Score=36.61 Aligned_cols=93 Identities=11% Similarity=-0.140 Sum_probs=52.5
Q ss_pred CCCCeEEEEec--ccchhHHHHhh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEe---CchhchhhhcCCCCCCCc
Q 043853 66 DGSEIVLDLFC--GTGTIGLTLAR-WVKHVYGYEVVPQAISDACRNAKLNNISNATFVQ---GDLNKIGGDFGNAFPKPD 139 (222)
Q Consensus 66 ~~~~~vlDlg~--G~G~~~~~la~-~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~---~d~~~~~~~~~~~~~~fD 139 (222)
.++++||-.|+ |.|...+.+++ .+.+|+++|.++...+.+++ .+.+. .+-. .++.+...... .. .+|
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~----~g~~~-~~d~~~~~~~~~~~~~~~-~~-~~D 240 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS----IGGEV-FIDFTKEKDIVGAVLKAT-DG-GAH 240 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHH----TTCCE-EEETTTCSCHHHHHHHHH-TS-CEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH----cCCce-EEecCccHhHHHHHHHHh-CC-CCC
Confidence 35789999998 45666665554 45699999999887776654 35431 1211 12222222111 11 689
Q ss_pred EEEECCCCCCccHHHHHHHHhCCCCcEEE
Q 043853 140 IVISDPNRPGMHMKLIKFLLKLKAPRIVY 168 (222)
Q Consensus 140 ~ii~~pp~~~~~~~~~~~l~~l~~~~~v~ 168 (222)
+++.+.. ....+...+..++++|.+.
T Consensus 241 ~vi~~~g---~~~~~~~~~~~l~~~G~iv 266 (347)
T 2hcy_A 241 GVINVSV---SEAAIEASTRYVRANGTTV 266 (347)
T ss_dssp EEEECSS---CHHHHHHHTTSEEEEEEEE
T ss_pred EEEECCC---cHHHHHHHHHHHhcCCEEE
Confidence 9988753 1123333444456666554
No 391
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=84.26 E-value=3.9 Score=32.01 Aligned_cols=77 Identities=21% Similarity=0.185 Sum_probs=50.0
Q ss_pred CCeEEEEecccchhHHH----HhhcCCeEEEEeCCHHHHHHHHHHHHHcCC-CcEEEEeCchhchhh--hcCCCCCCCcE
Q 043853 68 SEIVLDLFCGTGTIGLT----LARWVKHVYGYEVVPQAISDACRNAKLNNI-SNATFVQGDLNKIGG--DFGNAFPKPDI 140 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~----la~~~~~v~gvD~~~~~i~~a~~n~~~~~~-~~v~~~~~d~~~~~~--~~~~~~~~fD~ 140 (222)
++++|=.|+ +|+++.. +++.+.+|+.++.++...+.+.+.+...+. ..+.++..|+.+... ......+..|+
T Consensus 10 ~k~~lVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~ 88 (267)
T 3t4x_A 10 GKTALVTGS-TAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDI 88 (267)
T ss_dssp TCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSE
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCE
Confidence 566776665 4555544 445577999999999888777776665432 247888888865421 11112247899
Q ss_pred EEECC
Q 043853 141 VISDP 145 (222)
Q Consensus 141 ii~~p 145 (222)
++.+.
T Consensus 89 lv~nA 93 (267)
T 3t4x_A 89 LINNL 93 (267)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 99875
No 392
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=83.96 E-value=2.6 Score=34.48 Aligned_cols=94 Identities=11% Similarity=0.057 Sum_probs=53.9
Q ss_pred CCCCeEEEEec--ccchhHHHHhh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCcE-EEEeCchhchhhhcCCCCCCCcEE
Q 043853 66 DGSEIVLDLFC--GTGTIGLTLAR-WVKHVYGYEVVPQAISDACRNAKLNNISNA-TFVQGDLNKIGGDFGNAFPKPDIV 141 (222)
Q Consensus 66 ~~~~~vlDlg~--G~G~~~~~la~-~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v-~~~~~d~~~~~~~~~~~~~~fD~i 141 (222)
.++++||-.|+ |.|...+.+++ .+.+|++++.++..++.+++ .|.+.+ .....++.+...... ....+|++
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~----~ga~~~~d~~~~~~~~~~~~~~-~~~~~d~v 239 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKA----LGADETVNYTHPDWPKEVRRLT-GGKGADKV 239 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HTCSEEEETTSTTHHHHHHHHT-TTTCEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----cCCCEEEcCCcccHHHHHHHHh-CCCCceEE
Confidence 35789999998 46666666655 45699999999998888764 354321 111112212111111 12369999
Q ss_pred EECCCCCCccHHHHHHHHhCCCCcEEE
Q 043853 142 ISDPNRPGMHMKLIKFLLKLKAPRIVY 168 (222)
Q Consensus 142 i~~pp~~~~~~~~~~~l~~l~~~~~v~ 168 (222)
+-+.. ... +...+..++++|.+.
T Consensus 240 i~~~g-~~~---~~~~~~~l~~~G~~v 262 (343)
T 2eih_A 240 VDHTG-ALY---FEGVIKATANGGRIA 262 (343)
T ss_dssp EESSC-SSS---HHHHHHHEEEEEEEE
T ss_pred EECCC-HHH---HHHHHHhhccCCEEE
Confidence 88764 222 333444456655544
No 393
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=83.86 E-value=5.2 Score=31.99 Aligned_cols=76 Identities=18% Similarity=0.118 Sum_probs=52.0
Q ss_pred CCeEEEEecccchhHH----HHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhh------cCCCCCC
Q 043853 68 SEIVLDLFCGTGTIGL----TLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGD------FGNAFPK 137 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~----~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~------~~~~~~~ 137 (222)
++++|=.|++ |+++. .+++.+.+|+.++.++..++.+.+.++..+. ++.++.+|+.+...- .....+.
T Consensus 31 gk~vlVTGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 108 (301)
T 3tjr_A 31 GRAAVVTGGA-SGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGF-DAHGVVCDVRHLDEMVRLADEAFRLLGG 108 (301)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence 5677777765 44554 4445577999999999998888877776654 588999998664311 1011136
Q ss_pred CcEEEECC
Q 043853 138 PDIVISDP 145 (222)
Q Consensus 138 fD~ii~~p 145 (222)
.|++|.+.
T Consensus 109 id~lvnnA 116 (301)
T 3tjr_A 109 VDVVFSNA 116 (301)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 89999885
No 394
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=83.84 E-value=3.9 Score=33.47 Aligned_cols=93 Identities=14% Similarity=0.050 Sum_probs=52.6
Q ss_pred CCCeEEEEe-cc-cchhHHHHhh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEE
Q 043853 67 GSEIVLDLF-CG-TGTIGLTLAR-WVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVIS 143 (222)
Q Consensus 67 ~~~~vlDlg-~G-~G~~~~~la~-~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~ 143 (222)
++++||=.| +| .|..++.+++ .+.+|++++.+++.++.+++ .|.+.+--...|..+..... ....+|+++-
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~vi~~~~~~~~~~~~~--~~~g~Dvv~d 223 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK----MGADIVLNHKESLLNQFKTQ--GIELVDYVFC 223 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH----HTCSEEECTTSCHHHHHHHH--TCCCEEEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCcEEEECCccHHHHHHHh--CCCCccEEEE
Confidence 478888774 33 4555555555 35699999999998888876 35542211112222222222 1236999987
Q ss_pred CCCCCCccHHHHHHHHhCCCCcEEE
Q 043853 144 DPNRPGMHMKLIKFLLKLKAPRIVY 168 (222)
Q Consensus 144 ~pp~~~~~~~~~~~l~~l~~~~~v~ 168 (222)
... -...+...+..++++|.+.
T Consensus 224 ~~g---~~~~~~~~~~~l~~~G~iv 245 (346)
T 3fbg_A 224 TFN---TDMYYDDMIQLVKPRGHIA 245 (346)
T ss_dssp SSC---HHHHHHHHHHHEEEEEEEE
T ss_pred CCC---chHHHHHHHHHhccCCEEE
Confidence 542 1122344555667777664
No 395
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=83.79 E-value=5.8 Score=30.94 Aligned_cols=77 Identities=10% Similarity=-0.065 Sum_probs=51.2
Q ss_pred CCeEEEEecccchhHH----HHhhcCCeEEEEeCCHHHHHHHHHHHHH-cCCCcEEEEeCchhchhh------hcCCCCC
Q 043853 68 SEIVLDLFCGTGTIGL----TLARWVKHVYGYEVVPQAISDACRNAKL-NNISNATFVQGDLNKIGG------DFGNAFP 136 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~----~la~~~~~v~gvD~~~~~i~~a~~n~~~-~~~~~v~~~~~d~~~~~~------~~~~~~~ 136 (222)
++++|=.|++. +++. .+++.+.+|+.++.++..++.+.+.+.. .+-.++.++.+|+.+... ......+
T Consensus 8 ~k~~lVTGas~-GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 86 (265)
T 3lf2_A 8 EAVAVVTGGSS-GIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLG 86 (265)
T ss_dssp TCEEEEETCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCCC-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 56777777554 4444 4445677999999999988887777765 443358899999866431 1111113
Q ss_pred CCcEEEECC
Q 043853 137 KPDIVISDP 145 (222)
Q Consensus 137 ~fD~ii~~p 145 (222)
..|+++.+.
T Consensus 87 ~id~lvnnA 95 (265)
T 3lf2_A 87 CASILVNNA 95 (265)
T ss_dssp SCSEEEECC
T ss_pred CCCEEEECC
Confidence 689999885
No 396
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=83.61 E-value=2.7 Score=33.25 Aligned_cols=75 Identities=17% Similarity=0.211 Sum_probs=47.8
Q ss_pred CCeEEEEecccchhHHHH----hhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh------hcCCCCCC
Q 043853 68 SEIVLDLFCGTGTIGLTL----ARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG------DFGNAFPK 137 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~l----a~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~------~~~~~~~~ 137 (222)
++++|=.|+ +|+++..+ ++.+.+|+.++.++...+...+.+...+ ++.++.+|+.+... ......+.
T Consensus 29 ~k~vlVTGa-s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 105 (276)
T 2b4q_A 29 GRIALVTGG-SRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG--DCQAIPADLSSEAGARRLAQALGELSAR 105 (276)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS--CEEECCCCTTSHHHHHHHHHHHHHHCSC
T ss_pred CCEEEEeCC-CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--ceEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 567776665 55555544 4457799999999887766655554333 58888888865421 11111236
Q ss_pred CcEEEECC
Q 043853 138 PDIVISDP 145 (222)
Q Consensus 138 fD~ii~~p 145 (222)
.|++|.+.
T Consensus 106 iD~lvnnA 113 (276)
T 2b4q_A 106 LDILVNNA 113 (276)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 89999875
No 397
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=83.56 E-value=2.3 Score=34.66 Aligned_cols=95 Identities=15% Similarity=0.041 Sum_probs=54.7
Q ss_pred CCCCeEEEEec--ccchhHHHHhh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhhhcCCCCCCCcEE
Q 043853 66 DGSEIVLDLFC--GTGTIGLTLAR-WVKHVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGDFGNAFPKPDIV 141 (222)
Q Consensus 66 ~~~~~vlDlg~--G~G~~~~~la~-~~~~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~~~~~~~fD~i 141 (222)
.++++||-.|+ |.|..++.+++ .+.+|++++.+++.++.+++ .|.+. +.....|..+...... ....+|++
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga~~~~~~~~~~~~~~~~~~~-~~~g~D~v 221 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKE----YGAEYLINASKEDILRQVLKFT-NGKGVDAS 221 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCSEEEETTTSCHHHHHHHHT-TTSCEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCcEEEeCCCchHHHHHHHHh-CCCCceEE
Confidence 45889999984 35556666655 45699999999988887755 45432 1111122222222211 12369999
Q ss_pred EECCCCCCccHHHHHHHHhCCCCcEEEE
Q 043853 142 ISDPNRPGMHMKLIKFLLKLKAPRIVYV 169 (222)
Q Consensus 142 i~~pp~~~~~~~~~~~l~~l~~~~~v~~ 169 (222)
+-+... ..+...+..++++|.+..
T Consensus 222 id~~g~----~~~~~~~~~l~~~G~iv~ 245 (334)
T 3qwb_A 222 FDSVGK----DTFEISLAALKRKGVFVS 245 (334)
T ss_dssp EECCGG----GGHHHHHHHEEEEEEEEE
T ss_pred EECCCh----HHHHHHHHHhccCCEEEE
Confidence 876532 234444555666666553
No 398
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=83.43 E-value=7.5 Score=25.60 Aligned_cols=79 Identities=16% Similarity=-0.080 Sum_probs=48.6
Q ss_pred CCeEEEEecccchhHHHHh----hcC-CeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchh--hhcCCCCCCCcE
Q 043853 68 SEIVLDLFCGTGTIGLTLA----RWV-KHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIG--GDFGNAFPKPDI 140 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la----~~~-~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~--~~~~~~~~~fD~ 140 (222)
.++|+=+|+ |.++..++ +.+ .+++++|.++..++.++ . .++.+...|..+.. .... ..+|+
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~---~~~~~~~~d~~~~~~~~~~~---~~~d~ 72 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R---MGVATKQVDAKDEAGLAKAL---GGFDA 72 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T---TTCEEEECCTTCHHHHHHHT---TTCSE
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h---CCCcEEEecCCCHHHHHHHH---cCCCE
Confidence 467888888 55555433 345 68999999988776654 1 23567777775432 1111 36899
Q ss_pred EEECCCCCCccHHHHHHHH
Q 043853 141 VISDPNRPGMHMKLIKFLL 159 (222)
Q Consensus 141 ii~~pp~~~~~~~~~~~l~ 159 (222)
|+...|.. ....+.+...
T Consensus 73 vi~~~~~~-~~~~~~~~~~ 90 (118)
T 3ic5_A 73 VISAAPFF-LTPIIAKAAK 90 (118)
T ss_dssp EEECSCGG-GHHHHHHHHH
T ss_pred EEECCCch-hhHHHHHHHH
Confidence 99887633 2344444443
No 399
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=83.35 E-value=4.4 Score=32.02 Aligned_cols=76 Identities=14% Similarity=0.177 Sum_probs=50.2
Q ss_pred CCeEEEEecccchhHHHHh----hcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh--h----cCCCCCC
Q 043853 68 SEIVLDLFCGTGTIGLTLA----RWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG--D----FGNAFPK 137 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la----~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~--~----~~~~~~~ 137 (222)
++++|=.| |+|+++..++ +.+.+|++++.++..++...+.+...+..++.++.+|+.+... . .....+.
T Consensus 28 ~k~vlITG-asggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 106 (286)
T 1xu9_A 28 GKKVIVTG-ASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG 106 (286)
T ss_dssp TCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 56777666 4566665444 4567999999999888777666665554468899999876421 1 0001136
Q ss_pred CcEEEEC
Q 043853 138 PDIVISD 144 (222)
Q Consensus 138 fD~ii~~ 144 (222)
+|++|.+
T Consensus 107 iD~li~n 113 (286)
T 1xu9_A 107 LDMLILN 113 (286)
T ss_dssp CSEEEEC
T ss_pred CCEEEEC
Confidence 8999977
No 400
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=83.14 E-value=2.2 Score=34.62 Aligned_cols=96 Identities=16% Similarity=0.112 Sum_probs=55.3
Q ss_pred CCCCeEEEEec--ccchhHHHHhh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhhhcCCCCCCCcEE
Q 043853 66 DGSEIVLDLFC--GTGTIGLTLAR-WVKHVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGDFGNAFPKPDIV 141 (222)
Q Consensus 66 ~~~~~vlDlg~--G~G~~~~~la~-~~~~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~~~~~~~fD~i 141 (222)
.++++||-.|+ |.|..++.+++ .+.+|++++.+++.++.+++ .|.+. +.....|..+...... ....+|++
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~Ga~~~~~~~~~~~~~~~~~~~-~~~g~Dvv 213 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKA----LGAWETIDYSHEDVAKRVLELT-DGKKCPVV 213 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH----HTCSEEEETTTSCHHHHHHHHT-TTCCEEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCCEEEeCCCccHHHHHHHHh-CCCCceEE
Confidence 35789998883 35666665555 46699999999998888764 35432 1111122222222211 12369998
Q ss_pred EECCCCCCccHHHHHHHHhCCCCcEEEEe
Q 043853 142 ISDPNRPGMHMKLIKFLLKLKAPRIVYVS 170 (222)
Q Consensus 142 i~~pp~~~~~~~~~~~l~~l~~~~~v~~~ 170 (222)
+-+... ..+...+..++++|.+.+.
T Consensus 214 id~~g~----~~~~~~~~~l~~~G~iv~~ 238 (325)
T 3jyn_A 214 YDGVGQ----DTWLTSLDSVAPRGLVVSF 238 (325)
T ss_dssp EESSCG----GGHHHHHTTEEEEEEEEEC
T ss_pred EECCCh----HHHHHHHHHhcCCCEEEEE
Confidence 876532 2344455556776665543
No 401
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=82.98 E-value=2.9 Score=33.88 Aligned_cols=94 Identities=16% Similarity=0.044 Sum_probs=53.3
Q ss_pred CCCCeEEEEec--ccchhHHHHhh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEe--CchhchhhhcCCCCCCCcE
Q 043853 66 DGSEIVLDLFC--GTGTIGLTLAR-WVKHVYGYEVVPQAISDACRNAKLNNISNATFVQ--GDLNKIGGDFGNAFPKPDI 140 (222)
Q Consensus 66 ~~~~~vlDlg~--G~G~~~~~la~-~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~--~d~~~~~~~~~~~~~~fD~ 140 (222)
.++++||-.|+ |.|...+.+++ .+.+|+++|.+++..+.+++ .+.+ ..+-. .+..+...... ....+|+
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~~-~~~~~D~ 212 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK----AGAW-QVINYREEDLVERLKEIT-GGKKVRV 212 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH----HTCS-EEEETTTSCHHHHHHHHT-TTCCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCCC-EEEECCCccHHHHHHHHh-CCCCceE
Confidence 35789999983 45555555544 46699999999988887765 2443 21211 12211111111 1136999
Q ss_pred EEECCCCCCccHHHHHHHHhCCCCcEEEE
Q 043853 141 VISDPNRPGMHMKLIKFLLKLKAPRIVYV 169 (222)
Q Consensus 141 ii~~pp~~~~~~~~~~~l~~l~~~~~v~~ 169 (222)
++-+.. ...+...+..++++|.+..
T Consensus 213 vi~~~g----~~~~~~~~~~l~~~G~iv~ 237 (327)
T 1qor_A 213 VYDSVG----RDTWERSLDCLQRRGLMVS 237 (327)
T ss_dssp EEECSC----GGGHHHHHHTEEEEEEEEE
T ss_pred EEECCc----hHHHHHHHHHhcCCCEEEE
Confidence 988753 2334445555666665543
No 402
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=82.93 E-value=6 Score=30.43 Aligned_cols=76 Identities=16% Similarity=0.095 Sum_probs=51.3
Q ss_pred CCeEEEEecccchhHHHH----hhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh------hcCCCCCC
Q 043853 68 SEIVLDLFCGTGTIGLTL----ARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG------DFGNAFPK 137 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~l----a~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~------~~~~~~~~ 137 (222)
++++|=.|+ +|+++..+ ++.+.+|+.++.++...+.+.+.+...+. ++.++.+|+.+... ......+.
T Consensus 9 ~k~vlITGa-s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 86 (253)
T 3qiv_A 9 NKVGIVTGS-GGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGG-TAISVAVDVSDPESAKAMADRTLAEFGG 86 (253)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECC-CChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 567776775 45555444 44577999999999988888777766543 58889999866431 11111136
Q ss_pred CcEEEECC
Q 043853 138 PDIVISDP 145 (222)
Q Consensus 138 fD~ii~~p 145 (222)
.|++|.+.
T Consensus 87 id~li~~A 94 (253)
T 3qiv_A 87 IDYLVNNA 94 (253)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999885
No 403
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=82.78 E-value=3.4 Score=32.17 Aligned_cols=75 Identities=11% Similarity=-0.016 Sum_probs=51.4
Q ss_pred CCeEEEEecccchhHH----HHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh------hcCCCCCC
Q 043853 68 SEIVLDLFCGTGTIGL----TLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG------DFGNAFPK 137 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~----~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~------~~~~~~~~ 137 (222)
++++|=.|++. +++. .+++.+.+|+.++.++..++.+.+.++..+. ++.++.+|+.+... ..... +.
T Consensus 7 ~k~vlVTGas~-GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~-g~ 83 (252)
T 3h7a_A 7 NATVAVIGAGD-YIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGG-RIVARSLDARNEDEVTAFLNAADAH-AP 83 (252)
T ss_dssp SCEEEEECCSS-HHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHH-SC
T ss_pred CCEEEEECCCc-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEECcCCCHHHHHHHHHHHHhh-CC
Confidence 56777666654 4444 4445677999999999888888877776653 58999999866431 11111 36
Q ss_pred CcEEEECC
Q 043853 138 PDIVISDP 145 (222)
Q Consensus 138 fD~ii~~p 145 (222)
.|+++.+.
T Consensus 84 id~lv~nA 91 (252)
T 3h7a_A 84 LEVTIFNV 91 (252)
T ss_dssp EEEEEECC
T ss_pred ceEEEECC
Confidence 89999875
No 404
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=82.57 E-value=2.8 Score=33.10 Aligned_cols=76 Identities=13% Similarity=0.076 Sum_probs=51.3
Q ss_pred CCeEEEEecccchhHHH----HhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh------hcCCCCCC
Q 043853 68 SEIVLDLFCGTGTIGLT----LARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG------DFGNAFPK 137 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~----la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~------~~~~~~~~ 137 (222)
++++|=.|+ +|+++.. +++.+.+|+.++.++..++.+.+.++..+. ++.++.+|+.+... ........
T Consensus 26 gk~~lVTGa-s~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 103 (271)
T 4ibo_A 26 GRTALVTGS-SRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGH-DAEAVAFDVTSESEIIEAFARLDEQGID 103 (271)
T ss_dssp TCEEEETTC-SSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence 566776664 4555544 445577999999999988888777766554 58889999866431 11112236
Q ss_pred CcEEEECC
Q 043853 138 PDIVISDP 145 (222)
Q Consensus 138 fD~ii~~p 145 (222)
.|+++.+.
T Consensus 104 iD~lv~nA 111 (271)
T 4ibo_A 104 VDILVNNA 111 (271)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999875
No 405
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=82.49 E-value=2 Score=35.39 Aligned_cols=94 Identities=17% Similarity=0.108 Sum_probs=53.8
Q ss_pred CCCCeEEEEec--ccchhHHHHhh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhhhcCCCCCCCcEE
Q 043853 66 DGSEIVLDLFC--GTGTIGLTLAR-WVKHVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGDFGNAFPKPDIV 141 (222)
Q Consensus 66 ~~~~~vlDlg~--G~G~~~~~la~-~~~~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~~~~~~~fD~i 141 (222)
.++++||-.|+ |.|..++.+++ .+.+|++++.+++.++.+++ .|.+. +.....|..+...... ...+|++
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~~~~~~~~~~~~~~~~~~--~~g~Dvv 239 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER----LGAKRGINYRSEDFAAVIKAET--GQGVDII 239 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HTCSEEEETTTSCHHHHHHHHH--SSCEEEE
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCCEEEeCCchHHHHHHHHHh--CCCceEE
Confidence 34788888753 35555555555 45699999999998888765 35542 1111222222222111 2369999
Q ss_pred EECCCCCCccHHHHHHHHhCCCCcEEEE
Q 043853 142 ISDPNRPGMHMKLIKFLLKLKAPRIVYV 169 (222)
Q Consensus 142 i~~pp~~~~~~~~~~~l~~l~~~~~v~~ 169 (222)
+-.... ..+...+..++++|.+..
T Consensus 240 id~~g~----~~~~~~~~~l~~~G~iv~ 263 (353)
T 4dup_A 240 LDMIGA----AYFERNIASLAKDGCLSI 263 (353)
T ss_dssp EESCCG----GGHHHHHHTEEEEEEEEE
T ss_pred EECCCH----HHHHHHHHHhccCCEEEE
Confidence 876542 234445555666666543
No 406
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=82.31 E-value=5.9 Score=30.79 Aligned_cols=76 Identities=11% Similarity=0.074 Sum_probs=51.3
Q ss_pred CCeEEEEecccchhHH----HHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh------hcCCCCCC
Q 043853 68 SEIVLDLFCGTGTIGL----TLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG------DFGNAFPK 137 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~----~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~------~~~~~~~~ 137 (222)
++++|=.|++ |+++. .+++.+.+|+.+|.++...+.+.+.++..+. ++.++.+|+.+... ......+.
T Consensus 12 ~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 89 (256)
T 3gaf_A 12 DAVAIVTGAA-AGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGG-KAIGLECNVTDEQHREAVIKAALDQFGK 89 (256)
T ss_dssp TCEEEECSCS-SHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5667766655 44444 4445678999999999888888777776553 58889999866431 11111136
Q ss_pred CcEEEECC
Q 043853 138 PDIVISDP 145 (222)
Q Consensus 138 fD~ii~~p 145 (222)
.|+++.+.
T Consensus 90 id~lv~nA 97 (256)
T 3gaf_A 90 ITVLVNNA 97 (256)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999875
No 407
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=82.29 E-value=4.4 Score=32.25 Aligned_cols=90 Identities=17% Similarity=0.101 Sum_probs=52.2
Q ss_pred CeEEEEecccchhHHHHhh----cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEEC
Q 043853 69 EIVLDLFCGTGTIGLTLAR----WVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISD 144 (222)
Q Consensus 69 ~~vlDlg~G~G~~~~~la~----~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~ 144 (222)
++||=.| |+|.++..+++ .+.+|++++.++...+ . ++++++.+|+. . ..+......+|+||..
T Consensus 3 ~~vlVtG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~---------~~~~~~~~Dl~-~-~~~~~~~~~~d~Vih~ 69 (311)
T 3m2p_A 3 LKIAVTG-GTGFLGQYVVESIKNDGNTPIILTRSIGNKA-I---------NDYEYRVSDYT-L-EDLINQLNDVDAVVHL 69 (311)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCCC---------------CCEEEECCCC-H-HHHHHHTTTCSEEEEC
T ss_pred CEEEEEC-CCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-C---------CceEEEEcccc-H-HHHHHhhcCCCEEEEc
Confidence 4566444 57777765543 4669999998843322 1 15788999986 3 2221112378999876
Q ss_pred CCCCCc-------------cHHHHHHHHhCCCCcEEEEee
Q 043853 145 PNRPGM-------------HMKLIKFLLKLKAPRIVYVSC 171 (222)
Q Consensus 145 pp~~~~-------------~~~~~~~l~~l~~~~~v~~~~ 171 (222)
...... ...+++.+...+.++++|+|+
T Consensus 70 a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS 109 (311)
T 3m2p_A 70 AATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYAST 109 (311)
T ss_dssp CCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred cccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 431111 134555555556667899887
No 408
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=82.13 E-value=6.3 Score=34.59 Aligned_cols=70 Identities=13% Similarity=-0.073 Sum_probs=45.6
Q ss_pred CCeEEEEecccchhHHHHhh----cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEE
Q 043853 68 SEIVLDLFCGTGTIGLTLAR----WVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVIS 143 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~----~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~ 143 (222)
...++=+|+| .++..+++ .+..++.+|.+++.++.+++. . ++.++.+|+.+...-.......+|.+++
T Consensus 127 ~~hviI~G~g--~~g~~la~~L~~~~~~vvvid~~~~~~~~~~~~-----~-~~~~i~Gd~~~~~~L~~a~i~~a~~vi~ 198 (565)
T 4gx0_A 127 RGHILIFGID--PITRTLIRKLESRNHLFVVVTDNYDQALHLEEQ-----E-GFKVVYGSPTDAHVLAGLRVAAARSIIA 198 (565)
T ss_dssp CSCEEEESCC--HHHHHHHHHTTTTTCCEEEEESCHHHHHHHHHS-----C-SSEEEESCTTCHHHHHHTTGGGCSEEEE
T ss_pred CCeEEEECCC--hHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHh-----c-CCeEEEeCCCCHHHHHhcCcccCCEEEE
Confidence 4567766665 45554443 456899999999988877653 1 4689999996653221122246888888
Q ss_pred CC
Q 043853 144 DP 145 (222)
Q Consensus 144 ~p 145 (222)
.+
T Consensus 199 t~ 200 (565)
T 4gx0_A 199 NL 200 (565)
T ss_dssp CS
T ss_pred eC
Confidence 43
No 409
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=81.93 E-value=6 Score=30.63 Aligned_cols=77 Identities=13% Similarity=0.095 Sum_probs=50.6
Q ss_pred CCeEEEEecccchhHH----HHhhcCCeEEEEeCCHHHHHHHHHHHHHc--CCCcEEEEeCchhchhh------hcCCCC
Q 043853 68 SEIVLDLFCGTGTIGL----TLARWVKHVYGYEVVPQAISDACRNAKLN--NISNATFVQGDLNKIGG------DFGNAF 135 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~----~la~~~~~v~gvD~~~~~i~~a~~n~~~~--~~~~v~~~~~d~~~~~~------~~~~~~ 135 (222)
++++|=.|++ |+++. .+++.+.+|+.++.++..++.+.+.+... +..++.++.+|+.+... ......
T Consensus 7 ~k~~lVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (250)
T 3nyw_A 7 KGLAIITGAS-QGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKY 85 (250)
T ss_dssp CCEEEEESTT-SHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhc
Confidence 5667766655 44444 44455779999999999888887777654 22458889999866421 111111
Q ss_pred CCCcEEEECC
Q 043853 136 PKPDIVISDP 145 (222)
Q Consensus 136 ~~fD~ii~~p 145 (222)
+..|+++.+.
T Consensus 86 g~iD~lvnnA 95 (250)
T 3nyw_A 86 GAVDILVNAA 95 (250)
T ss_dssp CCEEEEEECC
T ss_pred CCCCEEEECC
Confidence 3689998875
No 410
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=81.92 E-value=5.4 Score=31.55 Aligned_cols=77 Identities=17% Similarity=0.169 Sum_probs=49.0
Q ss_pred CCeEEEEecccchhHH----HHhhcCCeEEEEeC-CHHHHHHHHHHHHHcCCCcEEEEeCchhchhh------hcCCCCC
Q 043853 68 SEIVLDLFCGTGTIGL----TLARWVKHVYGYEV-VPQAISDACRNAKLNNISNATFVQGDLNKIGG------DFGNAFP 136 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~----~la~~~~~v~gvD~-~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~------~~~~~~~ 136 (222)
++++|=.|++ |+++. .+++.+.+|+.++. ++...+...+.+....-.++.++.+|+.+... ......+
T Consensus 25 ~k~~lVTGas-~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 103 (281)
T 3v2h_A 25 TKTAVITGST-SGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFG 103 (281)
T ss_dssp TCEEEEETCS-SHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTS
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCC
Confidence 5677777754 44554 44455779999998 67777666666654423358999999866421 1111123
Q ss_pred CCcEEEECC
Q 043853 137 KPDIVISDP 145 (222)
Q Consensus 137 ~fD~ii~~p 145 (222)
..|+++.+.
T Consensus 104 ~iD~lv~nA 112 (281)
T 3v2h_A 104 GADILVNNA 112 (281)
T ss_dssp SCSEEEECC
T ss_pred CCCEEEECC
Confidence 789999875
No 411
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=81.48 E-value=2.8 Score=34.36 Aligned_cols=93 Identities=17% Similarity=0.032 Sum_probs=53.4
Q ss_pred CCCeEEEEecc-cchhHHHHhh-cCC-eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeC---chhchhhhcCCCCCCCcE
Q 043853 67 GSEIVLDLFCG-TGTIGLTLAR-WVK-HVYGYEVVPQAISDACRNAKLNNISNATFVQG---DLNKIGGDFGNAFPKPDI 140 (222)
Q Consensus 67 ~~~~vlDlg~G-~G~~~~~la~-~~~-~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~---d~~~~~~~~~~~~~~fD~ 140 (222)
++++||-+|+| .|..++.+++ .+. +|+++|.++...+.+++ .|.+. ++.. |+.+...... ....+|+
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~----~Ga~~--~~~~~~~~~~~~v~~~~-~g~g~D~ 239 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKK----VGADY--VINPFEEDVVKEVMDIT-DGNGVDV 239 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHH----HTCSE--EECTTTSCHHHHHHHHT-TTSCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hCCCE--EECCCCcCHHHHHHHHc-CCCCCCE
Confidence 57899999985 3455555555 355 89999999988887764 35432 2222 2222211111 1236999
Q ss_pred EEECCCCCCccHHHHHHHHhCCCCcEEEE
Q 043853 141 VISDPNRPGMHMKLIKFLLKLKAPRIVYV 169 (222)
Q Consensus 141 ii~~pp~~~~~~~~~~~l~~l~~~~~v~~ 169 (222)
++-.... ...+...+..++++|.+..
T Consensus 240 vid~~g~---~~~~~~~~~~l~~~G~iv~ 265 (348)
T 2d8a_A 240 FLEFSGA---PKALEQGLQAVTPAGRVSL 265 (348)
T ss_dssp EEECSCC---HHHHHHHHHHEEEEEEEEE
T ss_pred EEECCCC---HHHHHHHHHHHhcCCEEEE
Confidence 9876531 2334445555666665543
No 412
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=81.43 E-value=3.1 Score=34.03 Aligned_cols=93 Identities=17% Similarity=0.089 Sum_probs=54.9
Q ss_pred CCCCeEEEEec--ccchhHHHHhh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEe--CchhchhhhcCCCCCCCcE
Q 043853 66 DGSEIVLDLFC--GTGTIGLTLAR-WVKHVYGYEVVPQAISDACRNAKLNNISNATFVQ--GDLNKIGGDFGNAFPKPDI 140 (222)
Q Consensus 66 ~~~~~vlDlg~--G~G~~~~~la~-~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~--~d~~~~~~~~~~~~~~fD~ 140 (222)
.++++||=.|+ |.|..++.+++ .+.+|++++.+++..+.+++ .|.+. ++. .+..+...... ....+|+
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga~~--v~~~~~~~~~~v~~~~-~~~g~Dv 230 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS----VGADI--VLPLEEGWAKAVREAT-GGAGVDM 230 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----HTCSE--EEESSTTHHHHHHHHT-TTSCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCcE--EecCchhHHHHHHHHh-CCCCceE
Confidence 35889999987 45666666665 35699999999888877765 35542 222 23322222221 1236999
Q ss_pred EEECCCCCCccHHHHHHHHhCCCCcEEEE
Q 043853 141 VISDPNRPGMHMKLIKFLLKLKAPRIVYV 169 (222)
Q Consensus 141 ii~~pp~~~~~~~~~~~l~~l~~~~~v~~ 169 (222)
++-..... .+...+..++++|.+.+
T Consensus 231 vid~~g~~----~~~~~~~~l~~~G~iv~ 255 (342)
T 4eye_A 231 VVDPIGGP----AFDDAVRTLASEGRLLV 255 (342)
T ss_dssp EEESCC------CHHHHHHTEEEEEEEEE
T ss_pred EEECCchh----HHHHHHHhhcCCCEEEE
Confidence 98765421 23444555666666553
No 413
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=81.43 E-value=6.1 Score=30.75 Aligned_cols=76 Identities=13% Similarity=0.044 Sum_probs=51.5
Q ss_pred CCeEEEEecccchhHHHHh----hcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhh------cCCCCCC
Q 043853 68 SEIVLDLFCGTGTIGLTLA----RWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGD------FGNAFPK 137 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la----~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~------~~~~~~~ 137 (222)
++++|=.|+ +|+++..++ +.+.+|+.++.++..++.+.+.+...+. ++.++.+|+.+...- .....+.
T Consensus 29 ~k~vlITGa-s~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 106 (262)
T 3rkr_A 29 GQVAVVTGA-SRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGG-EAESHACDLSHSDAIAAFATGVLAAHGR 106 (262)
T ss_dssp TCEEEESST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECC-CChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCC-ceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 567776665 555665444 4577999999999988888777776553 588999998654311 1111136
Q ss_pred CcEEEECC
Q 043853 138 PDIVISDP 145 (222)
Q Consensus 138 fD~ii~~p 145 (222)
.|++|.+.
T Consensus 107 id~lv~~A 114 (262)
T 3rkr_A 107 CDVLVNNA 114 (262)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 89999875
No 414
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=81.27 E-value=10 Score=30.48 Aligned_cols=102 Identities=15% Similarity=0.163 Sum_probs=57.0
Q ss_pred CCeEEEEecccchhHHHHhh----cCCeEEEEeCCHHHHHHHHHHHHHcC----CCcEEEEeCchhchhhhcCCCCCCCc
Q 043853 68 SEIVLDLFCGTGTIGLTLAR----WVKHVYGYEVVPQAISDACRNAKLNN----ISNATFVQGDLNKIGGDFGNAFPKPD 139 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~----~~~~v~gvD~~~~~i~~a~~n~~~~~----~~~v~~~~~d~~~~~~~~~~~~~~fD 139 (222)
.++||=.| |+|.++..+++ .+.+|++++.++.........+.... .++++++.+|+.+... +......+|
T Consensus 25 ~~~vlVtG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~~~~d 102 (351)
T 3ruf_A 25 PKTWLITG-VAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTT-CEQVMKGVD 102 (351)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHH-HHHHTTTCS
T ss_pred CCeEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHH-HHHHhcCCC
Confidence 56777555 67777765543 46799999985432211111222111 0368999999876532 111113689
Q ss_pred EEEECCCCCCc-----------------cHHHHHHHHhCCCCcEEEEee
Q 043853 140 IVISDPNRPGM-----------------HMKLIKFLLKLKAPRIVYVSC 171 (222)
Q Consensus 140 ~ii~~pp~~~~-----------------~~~~~~~l~~l~~~~~v~~~~ 171 (222)
+||........ ...+++.+...+.+.++|+|+
T Consensus 103 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 151 (351)
T 3ruf_A 103 HVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAAS 151 (351)
T ss_dssp EEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred EEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEec
Confidence 99877532111 112444555555668899887
No 415
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=81.07 E-value=8.9 Score=31.12 Aligned_cols=97 Identities=7% Similarity=-0.065 Sum_probs=56.0
Q ss_pred CCCCeEEEEecccch-hHHHHhh--cCCeEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhhhcCCCCCCCcEE
Q 043853 66 DGSEIVLDLFCGTGT-IGLTLAR--WVKHVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGDFGNAFPKPDIV 141 (222)
Q Consensus 66 ~~~~~vlDlg~G~G~-~~~~la~--~~~~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~~~~~~~fD~i 141 (222)
.++++||=.|+|.++ +++.+++ .+.+|+++|.+++-.+.+++ .|.+. +.....|..+...... ....+|.+
T Consensus 162 ~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~----~Ga~~~i~~~~~~~~~~v~~~t-~g~g~d~~ 236 (348)
T 4eez_A 162 KPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKK----IGADVTINSGDVNPVDEIKKIT-GGLGVQSA 236 (348)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHH----TTCSEEEEC-CCCHHHHHHHHT-TSSCEEEE
T ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhh----cCCeEEEeCCCCCHHHHhhhhc-CCCCceEE
Confidence 347899999998654 4444444 35699999999987766654 45543 3444445443332222 12357777
Q ss_pred EECCCCCCccHHHHHHHHhCCCCcEEEEe
Q 043853 142 ISDPNRPGMHMKLIKFLLKLKAPRIVYVS 170 (222)
Q Consensus 142 i~~pp~~~~~~~~~~~l~~l~~~~~v~~~ 170 (222)
+.+.. -...+...+..++++|.+.+.
T Consensus 237 ~~~~~---~~~~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 237 IVCAV---ARIAFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp EECCS---CHHHHHHHHHTEEEEEEEEEC
T ss_pred EEecc---CcchhheeheeecCCceEEEE
Confidence 76543 223444555556666665433
No 416
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=81.04 E-value=8.9 Score=30.44 Aligned_cols=77 Identities=13% Similarity=0.109 Sum_probs=50.3
Q ss_pred CCeEEEEecccchhHHHHh----hcCC---eEEEEeCCHHHHHHHHHHHHHcC-CCcEEEEeCchhchhh------hcCC
Q 043853 68 SEIVLDLFCGTGTIGLTLA----RWVK---HVYGYEVVPQAISDACRNAKLNN-ISNATFVQGDLNKIGG------DFGN 133 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la----~~~~---~v~gvD~~~~~i~~a~~n~~~~~-~~~v~~~~~d~~~~~~------~~~~ 133 (222)
++++|=.|++ |+++..++ +.+. +|+.++.++..++.+.+.+.... -.++.++.+|+.+... ....
T Consensus 33 ~k~~lVTGas-~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 111 (287)
T 3rku_A 33 KKTVLITGAS-AGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ 111 (287)
T ss_dssp TCEEEEESTT-SHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred CCEEEEecCC-ChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 5677777755 55554443 3344 89999999998888877776542 2258889999866431 1111
Q ss_pred CCCCCcEEEECC
Q 043853 134 AFPKPDIVISDP 145 (222)
Q Consensus 134 ~~~~fD~ii~~p 145 (222)
..+..|++|.+.
T Consensus 112 ~~g~iD~lVnnA 123 (287)
T 3rku_A 112 EFKDIDILVNNA 123 (287)
T ss_dssp GGCSCCEEEECC
T ss_pred hcCCCCEEEECC
Confidence 224789999875
No 417
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=80.90 E-value=6.9 Score=30.86 Aligned_cols=76 Identities=18% Similarity=0.160 Sum_probs=50.6
Q ss_pred CCeEEEEecccchhHH----HHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh------hcCCCCCC
Q 043853 68 SEIVLDLFCGTGTIGL----TLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG------DFGNAFPK 137 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~----~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~------~~~~~~~~ 137 (222)
++++|=.|++ |+++. .+++.+.+|+.++.++..++.+.+.++..+. ++.++.+|+.+... ......+.
T Consensus 24 ~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 101 (279)
T 3sju_A 24 PQTAFVTGVS-SGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGH-DVDGSSCDVTSTDEVHAAVAAAVERFGP 101 (279)
T ss_dssp -CEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred CCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5677777754 45554 4445677999999999888888777765543 48899999866431 11111136
Q ss_pred CcEEEECC
Q 043853 138 PDIVISDP 145 (222)
Q Consensus 138 fD~ii~~p 145 (222)
.|++|.+.
T Consensus 102 id~lv~nA 109 (279)
T 3sju_A 102 IGILVNSA 109 (279)
T ss_dssp CCEEEECC
T ss_pred CcEEEECC
Confidence 89999875
No 418
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=80.80 E-value=8.1 Score=31.19 Aligned_cols=77 Identities=14% Similarity=0.098 Sum_probs=52.0
Q ss_pred CCeEEEEecccchhHH----HHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEeCchhchhh------hcCCCCC
Q 043853 68 SEIVLDLFCGTGTIGL----TLARWVKHVYGYEVVPQAISDACRNAKLNNIS-NATFVQGDLNKIGG------DFGNAFP 136 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~----~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~-~v~~~~~d~~~~~~------~~~~~~~ 136 (222)
++++|=.|++ |+++. .+++.+.+|+.++.++..++.+.+.+...+.. ++.++..|+.+... ......+
T Consensus 8 ~k~vlVTGas-~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 86 (319)
T 3ioy_A 8 GRTAFVTGGA-NGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG 86 (319)
T ss_dssp TCEEEEETTT-STHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCEEEEcCCc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence 5677777765 44444 44455779999999999888888777665542 58999999866421 1111113
Q ss_pred CCcEEEECC
Q 043853 137 KPDIVISDP 145 (222)
Q Consensus 137 ~fD~ii~~p 145 (222)
..|++|.+.
T Consensus 87 ~id~lv~nA 95 (319)
T 3ioy_A 87 PVSILCNNA 95 (319)
T ss_dssp CEEEEEECC
T ss_pred CCCEEEECC
Confidence 689999885
No 419
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=80.73 E-value=8.5 Score=30.63 Aligned_cols=77 Identities=9% Similarity=-0.113 Sum_probs=50.0
Q ss_pred CCCeEEEEecccc-hhH----HHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh------hcCCCC
Q 043853 67 GSEIVLDLFCGTG-TIG----LTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG------DFGNAF 135 (222)
Q Consensus 67 ~~~~vlDlg~G~G-~~~----~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~------~~~~~~ 135 (222)
.++++|=.|++.| +++ ..+++.+.+|+.++.++...+.+++.....+ ++.++.+|+.+... ......
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELG--AFVAGHCDVADAASIDAVFETLEKKW 107 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHT--CEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CceEEECCCCCHHHHHHHHHHHHHhc
Confidence 3678888887643 233 3556667899999999776666666555443 47888999866421 111112
Q ss_pred CCCcEEEECC
Q 043853 136 PKPDIVISDP 145 (222)
Q Consensus 136 ~~fD~ii~~p 145 (222)
+..|++|.+.
T Consensus 108 g~iD~lVnnA 117 (293)
T 3grk_A 108 GKLDFLVHAI 117 (293)
T ss_dssp SCCSEEEECC
T ss_pred CCCCEEEECC
Confidence 3789999875
No 420
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=80.54 E-value=4.8 Score=31.46 Aligned_cols=79 Identities=10% Similarity=-0.042 Sum_probs=54.6
Q ss_pred CCCeEEEEeccc--c--h-hHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh------hcCCCC
Q 043853 67 GSEIVLDLFCGT--G--T-IGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG------DFGNAF 135 (222)
Q Consensus 67 ~~~~vlDlg~G~--G--~-~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~------~~~~~~ 135 (222)
+++++|=-|+++ | . .+..+++.+.+|+.++.++...+.+.+.++..+-.++.++..|+.+... ......
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV 84 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 478888888643 3 2 3345667788999999999888888887776655568888888865421 111122
Q ss_pred CCCcEEEECC
Q 043853 136 PKPDIVISDP 145 (222)
Q Consensus 136 ~~fD~ii~~p 145 (222)
+..|+++.|.
T Consensus 85 G~iD~lvnnA 94 (256)
T 4fs3_A 85 GNIDGVYHSI 94 (256)
T ss_dssp CCCSEEEECC
T ss_pred CCCCEEEecc
Confidence 4799998874
No 421
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=80.53 E-value=6.6 Score=30.81 Aligned_cols=76 Identities=12% Similarity=0.047 Sum_probs=50.6
Q ss_pred CCeEEEEecccchhHH----HHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh------hcCCCCCC
Q 043853 68 SEIVLDLFCGTGTIGL----TLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG------DFGNAFPK 137 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~----~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~------~~~~~~~~ 137 (222)
++++|=.|++ |+++. .+++.+.+|+.++.++..++.+.+.++..+. ++.++.+|+.+... ......+.
T Consensus 4 ~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 81 (264)
T 3tfo_A 4 DKVILITGAS-GGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGG-TALAQVLDVTDRHSVAAFAQAAVDTWGR 81 (264)
T ss_dssp TCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4566666655 44444 4445677999999999988888877776553 48888888865421 11111136
Q ss_pred CcEEEECC
Q 043853 138 PDIVISDP 145 (222)
Q Consensus 138 fD~ii~~p 145 (222)
.|+++.+.
T Consensus 82 iD~lVnnA 89 (264)
T 3tfo_A 82 IDVLVNNA 89 (264)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999875
No 422
>2dpm_A M.dpnii 1, protein (adenine-specific methyltransferase dpnii 1); DNA adenine methyltransferase, methylase; HET: SAM; 1.80A {Streptococcus pneumoniae} SCOP: c.66.1.28
Probab=80.38 E-value=2.7 Score=33.84 Aligned_cols=44 Identities=18% Similarity=0.218 Sum_probs=32.5
Q ss_pred HHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHH
Q 043853 54 YKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAI 102 (222)
Q Consensus 54 ~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i 102 (222)
+.++...+. ....+.+|++||+|.++..+.. .+++..|+++..+
T Consensus 25 ~~~i~~~lp---~~~~~yvEpF~GggaV~~~~~~--~~~i~ND~n~~Li 68 (284)
T 2dpm_A 25 LPVIRELIP---KTYNRYFEPFVGGGALFFDLAP--KDAVINDFNAELI 68 (284)
T ss_dssp HHHHHHHSC---SSCSCEEETTCTTCHHHHHHCC--SEEEEEESCHHHH
T ss_pred HHHHHHHhc---cccCEEEeecCCccHHHHhhhc--cceeeeecchHHH
Confidence 444555542 1246899999999999887643 5899999999885
No 423
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=80.30 E-value=7.7 Score=30.51 Aligned_cols=77 Identities=12% Similarity=-0.006 Sum_probs=51.5
Q ss_pred CCeEEEEecccchhHH----HHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCC--cEEEEeCchhchhh------hcCCCC
Q 043853 68 SEIVLDLFCGTGTIGL----TLARWVKHVYGYEVVPQAISDACRNAKLNNIS--NATFVQGDLNKIGG------DFGNAF 135 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~----~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~--~v~~~~~d~~~~~~------~~~~~~ 135 (222)
++++|=.|+ +|+++. .+++.+.+|+.+|.++...+.+.+.++..+.. ++.++.+|+.+... ......
T Consensus 11 ~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 89 (281)
T 3svt_A 11 DRTYLVTGG-GSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWH 89 (281)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 567776665 455554 44455779999999999888887777765542 48899999866431 111111
Q ss_pred CCCcEEEECC
Q 043853 136 PKPDIVISDP 145 (222)
Q Consensus 136 ~~fD~ii~~p 145 (222)
+..|+++.+.
T Consensus 90 g~id~lv~nA 99 (281)
T 3svt_A 90 GRLHGVVHCA 99 (281)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 3689999875
No 424
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=80.11 E-value=4.4 Score=32.09 Aligned_cols=77 Identities=13% Similarity=0.050 Sum_probs=49.7
Q ss_pred CCeEEEEecccchhHHHH----hhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh------hcCCCCCC
Q 043853 68 SEIVLDLFCGTGTIGLTL----ARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG------DFGNAFPK 137 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~l----a~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~------~~~~~~~~ 137 (222)
++++|=.|+ +|+++.++ ++.+.+|+.++.++..++.+.+.+...+-..+.++.+|+.+... ......+.
T Consensus 33 gk~~lVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 111 (281)
T 4dry_A 33 GRIALVTGG-GTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFAR 111 (281)
T ss_dssp -CEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 566666664 45555544 44577999999999888877776655443346889999866431 11111136
Q ss_pred CcEEEECC
Q 043853 138 PDIVISDP 145 (222)
Q Consensus 138 fD~ii~~p 145 (222)
.|++|.+.
T Consensus 112 iD~lvnnA 119 (281)
T 4dry_A 112 LDLLVNNA 119 (281)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 89999875
No 425
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=79.55 E-value=11 Score=30.50 Aligned_cols=58 Identities=16% Similarity=0.150 Sum_probs=45.8
Q ss_pred CCeEEEEecccchhHHHHhh-cCCeEEEEeCCHHHHHHHHHHHHHcCC---CcEEEEeCchhc
Q 043853 68 SEIVLDLFCGTGTIGLTLAR-WVKHVYGYEVVPQAISDACRNAKLNNI---SNATFVQGDLNK 126 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~-~~~~v~gvD~~~~~i~~a~~n~~~~~~---~~v~~~~~d~~~ 126 (222)
...|++||||.=+....+.. ....++=+| .|..++..++.+...+. .+.+++.+|+.+
T Consensus 103 ~~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d 164 (310)
T 2uyo_A 103 IRQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ 164 (310)
T ss_dssp CCEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS
T ss_pred CCeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh
Confidence 35799999998888777763 235899999 69999999999976543 348899999875
No 426
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=79.30 E-value=7.4 Score=29.83 Aligned_cols=74 Identities=14% Similarity=0.074 Sum_probs=47.9
Q ss_pred CCCeEEEEecccchhHHHH----hhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh--hcCCCCCCCcE
Q 043853 67 GSEIVLDLFCGTGTIGLTL----ARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG--DFGNAFPKPDI 140 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~l----a~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~--~~~~~~~~fD~ 140 (222)
+++++|=.|+ +|+++..+ ++.+.+|+.++.++..++...+.+. .++.+..+|+.+... .+.......|+
T Consensus 13 ~~k~vlVTGa-s~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~id~ 87 (249)
T 3f9i_A 13 TGKTSLITGA-SSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK----DNYTIEVCNLANKEECSNLISKTSNLDI 87 (249)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----SSEEEEECCTTSHHHHHHHHHTCSCCSE
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc----cCccEEEcCCCCHHHHHHHHHhcCCCCE
Confidence 4677776665 45555544 4457799999999887776655442 358888888865431 11112246899
Q ss_pred EEECC
Q 043853 141 VISDP 145 (222)
Q Consensus 141 ii~~p 145 (222)
++.+.
T Consensus 88 li~~A 92 (249)
T 3f9i_A 88 LVCNA 92 (249)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 98875
No 427
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=79.13 E-value=5.1 Score=31.87 Aligned_cols=59 Identities=14% Similarity=0.024 Sum_probs=39.7
Q ss_pred CCeEEEEecccchhHHHH----hhcCCeEEEEe-CCHHHHHHHHHHHH-HcCCCcEEEEeCchhchh
Q 043853 68 SEIVLDLFCGTGTIGLTL----ARWVKHVYGYE-VVPQAISDACRNAK-LNNISNATFVQGDLNKIG 128 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~l----a~~~~~v~gvD-~~~~~i~~a~~n~~-~~~~~~v~~~~~d~~~~~ 128 (222)
++++|=.|+ +|+++..+ ++.+.+|+.++ .++..++.+.+.+. ..+ .++.++.+|+.+..
T Consensus 9 ~k~~lVTGa-s~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~ 73 (291)
T 1e7w_A 9 VPVALVTGA-AKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP-NSAITVQADLSNVA 73 (291)
T ss_dssp CCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSSC
T ss_pred CCEEEEECC-CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcC-CeeEEEEeecCCcc
Confidence 456665554 45555544 44577999999 99888777766664 333 25888888886643
No 428
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=78.78 E-value=5.2 Score=31.33 Aligned_cols=76 Identities=18% Similarity=0.153 Sum_probs=48.0
Q ss_pred CCeEEEEecccchhHHHHh----hcCCeEEEEeC-CHHHHHHHHHHHHHc-CCCcEEEEeCchhch----hh--hc----
Q 043853 68 SEIVLDLFCGTGTIGLTLA----RWVKHVYGYEV-VPQAISDACRNAKLN-NISNATFVQGDLNKI----GG--DF---- 131 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la----~~~~~v~gvD~-~~~~i~~a~~n~~~~-~~~~v~~~~~d~~~~----~~--~~---- 131 (222)
++++|=.| |+|+++..++ +.+.+|+.++. ++...+.+.+.+... + .++.++.+|+.+. .. ..
T Consensus 11 ~k~~lVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 88 (276)
T 1mxh_A 11 CPAAVITG-GARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARA-GSAVLCKGDLSLSSSLLDCCEDIIDCS 88 (276)
T ss_dssp CCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcC-CceEEEeccCCCccccHHHHHHHHHHH
Confidence 45666555 5566666544 45779999999 888777666665543 3 2588888888765 21 00
Q ss_pred CCCCCCCcEEEECC
Q 043853 132 GNAFPKPDIVISDP 145 (222)
Q Consensus 132 ~~~~~~fD~ii~~p 145 (222)
....+..|++|.+.
T Consensus 89 ~~~~g~id~lv~nA 102 (276)
T 1mxh_A 89 FRAFGRCDVLVNNA 102 (276)
T ss_dssp HHHHSCCCEEEECC
T ss_pred HHhcCCCCEEEECC
Confidence 00113689999875
No 429
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=78.75 E-value=12 Score=28.80 Aligned_cols=76 Identities=13% Similarity=0.025 Sum_probs=49.4
Q ss_pred CCeEEEEecccchhHHHH----hhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhh------cCCCCCC
Q 043853 68 SEIVLDLFCGTGTIGLTL----ARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGD------FGNAFPK 137 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~l----a~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~------~~~~~~~ 137 (222)
++++|=.|+ +|+++..+ ++.+.+|+.++.++..++.+.+.+...+. ++.++.+|+.+...- .....+.
T Consensus 7 ~k~~lVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 84 (247)
T 2jah_A 7 GKVALITGA-SSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGA-KVHVLELDVADRQGVDAAVASTVEALGG 84 (247)
T ss_dssp TCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 566776665 45555544 44577999999998888777666655443 588889998654211 0001136
Q ss_pred CcEEEECC
Q 043853 138 PDIVISDP 145 (222)
Q Consensus 138 fD~ii~~p 145 (222)
.|+++.+.
T Consensus 85 id~lv~nA 92 (247)
T 2jah_A 85 LDILVNNA 92 (247)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 89999875
No 430
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=78.72 E-value=22 Score=28.50 Aligned_cols=93 Identities=18% Similarity=0.184 Sum_probs=57.5
Q ss_pred CCeEEEEeccc-ch-hHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECC
Q 043853 68 SEIVLDLFCGT-GT-IGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDP 145 (222)
Q Consensus 68 ~~~vlDlg~G~-G~-~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~p 145 (222)
.++|-=+|+|. |. ++..++ .+.+|+..|.+++.++.+.+.+...-..++++. .|..+ . ...|+||..-
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~-~~~~~-~-------~~aDlVieav 81 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQIPEELLSKIEFT-TTLEK-V-------KDCDIVMEAV 81 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEE-SSCTT-G-------GGCSEEEECC
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhCCeEEe-CCHHH-H-------cCCCEEEEcC
Confidence 57888889884 33 555667 777999999999999988776200001124432 23322 1 2579999988
Q ss_pred CCC-CccHHHHHHHHhCCCCcEEEEee
Q 043853 146 NRP-GMHMKLIKFLLKLKAPRIVYVSC 171 (222)
Q Consensus 146 p~~-~~~~~~~~~l~~l~~~~~v~~~~ 171 (222)
|.. .+...+...+..+ ++.++...+
T Consensus 82 pe~~~vk~~l~~~l~~~-~~~Ilasnt 107 (293)
T 1zej_A 82 FEDLNTKVEVLREVERL-TNAPLCSNT 107 (293)
T ss_dssp CSCHHHHHHHHHHHHTT-CCSCEEECC
T ss_pred cCCHHHHHHHHHHHhcC-CCCEEEEEC
Confidence 743 3344555566667 666555433
No 431
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=78.70 E-value=13 Score=30.07 Aligned_cols=87 Identities=25% Similarity=0.259 Sum_probs=51.5
Q ss_pred CCeEEEEeccc-c-hhHHHHhhcCC--eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhc-hhhhcCCCCCCCcEEE
Q 043853 68 SEIVLDLFCGT-G-TIGLTLARWVK--HVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNK-IGGDFGNAFPKPDIVI 142 (222)
Q Consensus 68 ~~~vlDlg~G~-G-~~~~~la~~~~--~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~-~~~~~~~~~~~fD~ii 142 (222)
..+|.=+|+|. | .++..+++.+. +|+++|.++..++.+++ .|.. .-...|..+ .. ...|+||
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~----~G~~--~~~~~~~~~~~~-------~~aDvVi 99 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD----LGII--DEGTTSIAKVED-------FSPDFVM 99 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH----TTSC--SEEESCTTGGGG-------GCCSEEE
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH----CCCc--chhcCCHHHHhh-------ccCCEEE
Confidence 36788888763 2 23335555565 89999999988877653 3431 112234333 22 2579998
Q ss_pred ECCCCCCccHHHHHHHHh-CCCCcEEE
Q 043853 143 SDPNRPGMHMKLIKFLLK-LKAPRIVY 168 (222)
Q Consensus 143 ~~pp~~~~~~~~~~~l~~-l~~~~~v~ 168 (222)
..-|... ...+++.+.. ++++.++.
T Consensus 100 lavp~~~-~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 100 LSSPVRT-FREIAKKLSYILSEDATVT 125 (314)
T ss_dssp ECSCGGG-HHHHHHHHHHHSCTTCEEE
T ss_pred EeCCHHH-HHHHHHHHhhccCCCcEEE
Confidence 8766433 3455565654 56666554
No 432
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=78.59 E-value=8.5 Score=29.11 Aligned_cols=72 Identities=17% Similarity=0.103 Sum_probs=43.8
Q ss_pred CCeEEEEecccchhHHHHh----hcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh------hcCCCCCC
Q 043853 68 SEIVLDLFCGTGTIGLTLA----RWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG------DFGNAFPK 137 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la----~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~------~~~~~~~~ 137 (222)
++++|=.| |+|+++..++ +.+.+|+.++.++..++...+.+ .++.++.+|+.+... ......+.
T Consensus 5 ~k~vlVtG-asggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (234)
T 2ehd_A 5 KGAVLITG-ASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL-----EGALPLPGDVREEGDWARAVAAMEEAFGE 78 (234)
T ss_dssp CCEEEESS-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS-----TTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----hhceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 34566444 5667666554 45679999999987665544332 257788888865421 11001126
Q ss_pred CcEEEECC
Q 043853 138 PDIVISDP 145 (222)
Q Consensus 138 fD~ii~~p 145 (222)
+|+++.+.
T Consensus 79 id~li~~A 86 (234)
T 2ehd_A 79 LSALVNNA 86 (234)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89998875
No 433
>2g1p_A DNA adenine methylase; DAM methylation, GATC recognition, base flipping, bacterial factor, transferase-DNA complex; HET: DNA SAH; 1.89A {Escherichia coli} PDB: 2ore_D*
Probab=78.59 E-value=2.8 Score=33.57 Aligned_cols=43 Identities=16% Similarity=0.206 Sum_probs=32.3
Q ss_pred HHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHH
Q 043853 54 YKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAI 102 (222)
Q Consensus 54 ~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i 102 (222)
+.++...+. +..+.+|+++|+|.+.+.+. ..+++..|+++..+
T Consensus 18 ~~~i~~~~p----~~~~yvEpF~Ggg~V~~~~~--~~~~i~ND~n~~li 60 (278)
T 2g1p_A 18 LDDIKRHLP----KGECLVEPFVGAGSVFLNTD--FSRYILADINSDLI 60 (278)
T ss_dssp HHHHHHHCC----CCSEEEETTCTTCHHHHTCC--CSEEEEEESCHHHH
T ss_pred HHHHHHhcc----ccCeEEeeccCccHHHHhhc--ccceEEEeccHHHH
Confidence 444555542 25799999999999988653 35789999999886
No 434
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=78.38 E-value=9.2 Score=28.98 Aligned_cols=76 Identities=13% Similarity=0.142 Sum_probs=48.8
Q ss_pred CCeEEEEecccchhHHHH----hhcCCeEEEEeCCHHHHHHHHHHHH-HcCCCcEEEEeCchhchhh--hcCC----CCC
Q 043853 68 SEIVLDLFCGTGTIGLTL----ARWVKHVYGYEVVPQAISDACRNAK-LNNISNATFVQGDLNKIGG--DFGN----AFP 136 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~l----a~~~~~v~gvD~~~~~i~~a~~n~~-~~~~~~v~~~~~d~~~~~~--~~~~----~~~ 136 (222)
++++|=.|+ +|+++..+ ++.+.+|+.++.++..++.+.+.+. ..+. ++.++.+|+.+... .+.. ..+
T Consensus 2 ~k~vlITGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (235)
T 3l77_A 2 MKVAVITGA-SRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGV-EVFYHHLDVSKAESVEEFSKKVLERFG 79 (235)
T ss_dssp CCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred CCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCC-eEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence 345666664 55555544 4457799999999888877766664 3333 58899999866531 1111 113
Q ss_pred CCcEEEECC
Q 043853 137 KPDIVISDP 145 (222)
Q Consensus 137 ~fD~ii~~p 145 (222)
..|+++.+.
T Consensus 80 ~id~li~~A 88 (235)
T 3l77_A 80 DVDVVVANA 88 (235)
T ss_dssp SCSEEEECC
T ss_pred CCCEEEECC
Confidence 689999885
No 435
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=78.37 E-value=3.8 Score=34.25 Aligned_cols=96 Identities=13% Similarity=0.046 Sum_probs=55.4
Q ss_pred CCCCeEEEEeccc-chhHHHHhhc-CC-eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeC---c-hhchhhhcCCCCCCC
Q 043853 66 DGSEIVLDLFCGT-GTIGLTLARW-VK-HVYGYEVVPQAISDACRNAKLNNISNATFVQG---D-LNKIGGDFGNAFPKP 138 (222)
Q Consensus 66 ~~~~~vlDlg~G~-G~~~~~la~~-~~-~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~---d-~~~~~~~~~~~~~~f 138 (222)
.++++||-.|+|. |.+++.+|+. +. +|+++|.+++.++.+++ .|.+ .+.- + +.+...... ....+
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~i~~~~~~~~~~~v~~~t-~g~g~ 255 (398)
T 1kol_A 184 GPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA----QGFE---IADLSLDTPLHEQIAALL-GEPEV 255 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCE---EEETTSSSCHHHHHHHHH-SSSCE
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH----cCCc---EEccCCcchHHHHHHHHh-CCCCC
Confidence 3578999999763 6666666663 44 79999999998888864 4553 2221 1 111111111 11368
Q ss_pred cEEEECCCCCC------------ccHHHHHHHHhCCCCcEEEE
Q 043853 139 DIVISDPNRPG------------MHMKLIKFLLKLKAPRIVYV 169 (222)
Q Consensus 139 D~ii~~pp~~~------------~~~~~~~~l~~l~~~~~v~~ 169 (222)
|+||-...... ....+...+..++++|.+.+
T Consensus 256 Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~ 298 (398)
T 1kol_A 256 DCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGI 298 (398)
T ss_dssp EEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEE
T ss_pred CEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEE
Confidence 99887643221 01234455666677776653
No 436
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=78.25 E-value=11 Score=29.95 Aligned_cols=76 Identities=20% Similarity=0.249 Sum_probs=49.9
Q ss_pred CCeEEEEecccchhHH----HHhhcCCeEEEEeCC------------HHHHHHHHHHHHHcCCCcEEEEeCchhchhh--
Q 043853 68 SEIVLDLFCGTGTIGL----TLARWVKHVYGYEVV------------PQAISDACRNAKLNNISNATFVQGDLNKIGG-- 129 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~----~la~~~~~v~gvD~~------------~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~-- 129 (222)
++++|=.|++.| ++. .+++.+.+|+.+|.+ +..++.+.+.++..+. ++.++.+|+.+...
T Consensus 28 gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~ 105 (299)
T 3t7c_A 28 GKVAFITGAARG-QGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGR-RIIASQVDVRDFDAMQ 105 (299)
T ss_dssp TCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHH
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHH
Confidence 567777776554 444 445567899999987 6777777666666553 58899999866431
Q ss_pred ----hcCCCCCCCcEEEECC
Q 043853 130 ----DFGNAFPKPDIVISDP 145 (222)
Q Consensus 130 ----~~~~~~~~fD~ii~~p 145 (222)
......+..|++|.+.
T Consensus 106 ~~~~~~~~~~g~iD~lv~nA 125 (299)
T 3t7c_A 106 AAVDDGVTQLGRLDIVLANA 125 (299)
T ss_dssp HHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHhCCCCEEEECC
Confidence 1111113689998875
No 437
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=78.23 E-value=8.5 Score=30.45 Aligned_cols=76 Identities=20% Similarity=0.125 Sum_probs=49.9
Q ss_pred CCeEEEEecccchhHH----HHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh------hcCCCCCC
Q 043853 68 SEIVLDLFCGTGTIGL----TLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG------DFGNAFPK 137 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~----~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~------~~~~~~~~ 137 (222)
++++|=.|++ |+++. .+++.+.+|+.++.++..++.+.+.+...+. ++.++.+|+.+... ......+.
T Consensus 28 ~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 105 (283)
T 3v8b_A 28 SPVALITGAG-SGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGG-QAIALEADVSDELQMRNAVRDLVLKFGH 105 (283)
T ss_dssp CCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTC-CEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5677766655 44454 4445677999999999888877776654443 48889999866421 11111136
Q ss_pred CcEEEECC
Q 043853 138 PDIVISDP 145 (222)
Q Consensus 138 fD~ii~~p 145 (222)
.|+++.+.
T Consensus 106 iD~lVnnA 113 (283)
T 3v8b_A 106 LDIVVANA 113 (283)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89998875
No 438
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=78.11 E-value=15 Score=25.83 Aligned_cols=82 Identities=15% Similarity=0.036 Sum_probs=52.1
Q ss_pred CeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCCCCC-ccHHHHHHHHhCCCCcEEE
Q 043853 90 KHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPG-MHMKLIKFLLKLKAPRIVY 168 (222)
Q Consensus 90 ~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~~-~~~~~~~~l~~l~~~~~v~ 168 (222)
.+|.-+|-++...+..+..+...+...+.....+..+....+.. ..+|+|++|....+ -...+++.++...+..+++
T Consensus 26 ~~ILivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~~--~~~dlvilD~~l~~~~g~~l~~~lr~~~~~~ii~ 103 (164)
T 3t8y_A 26 IRVLVVDDSAFMRMVLKDIIDSQPDMKVVGFAKDGLEAVEKAIE--LKPDVITMDIEMPNLNGIEALKLIMKKAPTRVIM 103 (164)
T ss_dssp EEEEEECSCHHHHHHHHHHHHTSTTEEEEEEESSHHHHHHHHHH--HCCSEEEECSSCSSSCHHHHHHHHHHHSCCEEEE
T ss_pred cEEEEEcCCHHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHhcc--CCCCEEEEeCCCCCCCHHHHHHHHHhcCCceEEE
Confidence 48999999999999998888765421122234555554433221 36999999964322 2357777777666656666
Q ss_pred EeeCc
Q 043853 169 VSCNP 173 (222)
Q Consensus 169 ~~~~~ 173 (222)
++...
T Consensus 104 ~s~~~ 108 (164)
T 3t8y_A 104 VSSLT 108 (164)
T ss_dssp EESSC
T ss_pred EecCC
Confidence 66544
No 439
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=78.10 E-value=1.5 Score=37.62 Aligned_cols=58 Identities=10% Similarity=0.078 Sum_probs=40.2
Q ss_pred HHHHHHHHHhcCCCCCCCeEEEEecccchhHHHHhh----cC---CeEEEEeCCHHHHHHHHHHHHH
Q 043853 52 VLYKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLAR----WV---KHVYGYEVVPQAISDACRNAKL 111 (222)
Q Consensus 52 ~~~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~----~~---~~v~gvD~~~~~i~~a~~n~~~ 111 (222)
.+..++.+.....+ .-.|+|+|+|+|.++.-+.+ .. .+++-||.||.+.+.=++.+..
T Consensus 124 ~la~~~~~~~~~~g--~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 124 TLARPVAQALDASG--TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp HHHHHHHHHHHHHT--CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcC--CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 34455555443222 46899999999998875432 11 2799999999988777777754
No 440
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=78.05 E-value=6.4 Score=30.78 Aligned_cols=76 Identities=16% Similarity=0.042 Sum_probs=49.8
Q ss_pred CCeEEEEecccchhHH----HHhhcCCeEEEEeCCHHHHHHHHHHHHH-cCCCcEEEEeCchhchhh------hcCCCCC
Q 043853 68 SEIVLDLFCGTGTIGL----TLARWVKHVYGYEVVPQAISDACRNAKL-NNISNATFVQGDLNKIGG------DFGNAFP 136 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~----~la~~~~~v~gvD~~~~~i~~a~~n~~~-~~~~~v~~~~~d~~~~~~------~~~~~~~ 136 (222)
++++|=.|++ |+++. .+++.+.+|+.++.++..++.+.+.+.. .+. ++.++.+|+.+... ......+
T Consensus 20 ~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g 97 (266)
T 4egf_A 20 GKRALITGAT-KGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGT-DVHTVAIDLAEPDAPAELARRAAEAFG 97 (266)
T ss_dssp TCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTSTTHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 5666666654 55554 4445577999999999888877776654 333 58999999866431 1111113
Q ss_pred CCcEEEECC
Q 043853 137 KPDIVISDP 145 (222)
Q Consensus 137 ~fD~ii~~p 145 (222)
..|++|.+.
T Consensus 98 ~id~lv~nA 106 (266)
T 4egf_A 98 GLDVLVNNA 106 (266)
T ss_dssp SCSEEEEEC
T ss_pred CCCEEEECC
Confidence 689998875
No 441
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=78.03 E-value=12 Score=29.29 Aligned_cols=76 Identities=13% Similarity=0.111 Sum_probs=50.5
Q ss_pred CCeEEEEecccchhHHHHh----hcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh------hcCCCCCC
Q 043853 68 SEIVLDLFCGTGTIGLTLA----RWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG------DFGNAFPK 137 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la----~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~------~~~~~~~~ 137 (222)
++++|=.| |+|+++..++ +.+.+|+.++.++...+...+.++..+. ++.++.+|+.+... ......+.
T Consensus 31 ~k~vlITG-asggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 108 (272)
T 1yb1_A 31 GEIVLITG-AGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGA-KVHTFVVDCSNREDIYSSAKKVKAEIGD 108 (272)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCC-eEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence 56677666 5566666554 4567999999999888777666665543 58899999865421 11111236
Q ss_pred CcEEEECC
Q 043853 138 PDIVISDP 145 (222)
Q Consensus 138 fD~ii~~p 145 (222)
+|++|.+.
T Consensus 109 iD~li~~A 116 (272)
T 1yb1_A 109 VSILVNNA 116 (272)
T ss_dssp CSEEEECC
T ss_pred CcEEEECC
Confidence 89999876
No 442
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=77.75 E-value=12 Score=28.62 Aligned_cols=76 Identities=13% Similarity=0.128 Sum_probs=49.1
Q ss_pred CCeEEEEecccchhHHHHh----hcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh--hcC----CCCCC
Q 043853 68 SEIVLDLFCGTGTIGLTLA----RWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG--DFG----NAFPK 137 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la----~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~--~~~----~~~~~ 137 (222)
++++|=.| |+|+++..++ +.+.+|+.++.++...+...+.++..+. ++.++.+|+.+... ... .....
T Consensus 13 ~k~vlItG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (260)
T 3awd_A 13 NRVAIVTG-GAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGH-DVSSVVMDVTNTESVQNAVRSVHEQEGR 90 (260)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 56677665 5566666554 4567999999998877766666655443 58899999866431 100 01126
Q ss_pred CcEEEECC
Q 043853 138 PDIVISDP 145 (222)
Q Consensus 138 fD~ii~~p 145 (222)
+|++|.+.
T Consensus 91 id~vi~~A 98 (260)
T 3awd_A 91 VDILVACA 98 (260)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89998875
No 443
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=77.71 E-value=13 Score=32.35 Aligned_cols=89 Identities=17% Similarity=0.099 Sum_probs=54.5
Q ss_pred CCCeEEEEecc-cchhHHHHhh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEEC
Q 043853 67 GSEIVLDLFCG-TGTIGLTLAR-WVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISD 144 (222)
Q Consensus 67 ~~~~vlDlg~G-~G~~~~~la~-~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~ 144 (222)
.+++|+=+|+| .|......++ .+.+|+++|.++...+.|++ .|. ++ .+..+.. ...|+|+..
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~----~Ga---~~--~~l~e~l-------~~aDvVi~a 336 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMM----EGF---DV--VTVEEAI-------GDADIVVTA 336 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TTC---EE--CCHHHHG-------GGCSEEEEC
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCC---EE--ecHHHHH-------hCCCEEEEC
Confidence 47899999875 3333333333 35699999999987766643 344 22 2433322 258999998
Q ss_pred CCCCCccHHHHHHHHhCCCCcEEEEeeCc
Q 043853 145 PNRPGMHMKLIKFLLKLKAPRIVYVSCNP 173 (222)
Q Consensus 145 pp~~~~~~~~~~~l~~l~~~~~v~~~~~~ 173 (222)
.+...+.. .+.+..+++++++......
T Consensus 337 tgt~~~i~--~~~l~~mk~ggilvnvG~~ 363 (494)
T 3ce6_A 337 TGNKDIIM--LEHIKAMKDHAILGNIGHF 363 (494)
T ss_dssp SSSSCSBC--HHHHHHSCTTCEEEECSSS
T ss_pred CCCHHHHH--HHHHHhcCCCcEEEEeCCC
Confidence 76444332 2345557888887755543
No 444
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=77.68 E-value=25 Score=27.92 Aligned_cols=77 Identities=12% Similarity=0.062 Sum_probs=47.6
Q ss_pred CCeEEEEecccchhHHHHh----hcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEE-eCchhchhhhcCCCCCCCcEEE
Q 043853 68 SEIVLDLFCGTGTIGLTLA----RWVKHVYGYEVVPQAISDACRNAKLNNISNATFV-QGDLNKIGGDFGNAFPKPDIVI 142 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la----~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~-~~d~~~~~~~~~~~~~~fD~ii 142 (222)
+++||=.| |+|.++..++ +.+.+|++++.++...+.....+....-.+++++ .+|+.+... +..-...+|+||
T Consensus 11 ~~~vlVTG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~-~~~~~~~~d~vi 88 (342)
T 1y1p_A 11 GSLVLVTG-ANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGA-YDEVIKGAAGVA 88 (342)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTT-TTTTTTTCSEEE
T ss_pred CCEEEEEC-CccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHH-HHHHHcCCCEEE
Confidence 56777555 5677776554 3467999999998766555444332211358888 799876432 111123689998
Q ss_pred ECCC
Q 043853 143 SDPN 146 (222)
Q Consensus 143 ~~pp 146 (222)
....
T Consensus 89 h~A~ 92 (342)
T 1y1p_A 89 HIAS 92 (342)
T ss_dssp ECCC
T ss_pred EeCC
Confidence 8753
No 445
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=77.43 E-value=5 Score=32.53 Aligned_cols=95 Identities=18% Similarity=0.144 Sum_probs=52.9
Q ss_pred CCCCeEEEEec--ccchhHHHHhh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhhhcCCCCCCCcEE
Q 043853 66 DGSEIVLDLFC--GTGTIGLTLAR-WVKHVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGDFGNAFPKPDIV 141 (222)
Q Consensus 66 ~~~~~vlDlg~--G~G~~~~~la~-~~~~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~~~~~~~fD~i 141 (222)
.++++||-.|+ |.|...+.+++ .+.+|+++|.+++.++.+++ .+.+. +.....+..+...... ....+|++
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~----~g~~~~~d~~~~~~~~~i~~~~-~~~~~d~v 218 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK----LGCHHTINYSTQDFAEVVREIT-GGKGVDVV 218 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HTCSEEEETTTSCHHHHHHHHH-TTCCEEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCCEEEECCCHHHHHHHHHHh-CCCCCeEE
Confidence 35789999885 45655655554 45699999999988887765 34432 1111112211111111 11368999
Q ss_pred EECCCCCCccHHHHHHHHhCCCCcEEEE
Q 043853 142 ISDPNRPGMHMKLIKFLLKLKAPRIVYV 169 (222)
Q Consensus 142 i~~pp~~~~~~~~~~~l~~l~~~~~v~~ 169 (222)
+-+... ..+...+..++++|.+..
T Consensus 219 i~~~g~----~~~~~~~~~l~~~G~iv~ 242 (333)
T 1wly_A 219 YDSIGK----DTLQKSLDCLRPRGMCAA 242 (333)
T ss_dssp EECSCT----TTHHHHHHTEEEEEEEEE
T ss_pred EECCcH----HHHHHHHHhhccCCEEEE
Confidence 877542 223344455666665543
No 446
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=77.34 E-value=12 Score=29.27 Aligned_cols=76 Identities=14% Similarity=0.183 Sum_probs=49.4
Q ss_pred CCeEEEEecccchhHHHH----hhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh------hcCCCCCC
Q 043853 68 SEIVLDLFCGTGTIGLTL----ARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG------DFGNAFPK 137 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~l----a~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~------~~~~~~~~ 137 (222)
++++|=.|+ +|+++..+ ++.+.+|+.++.++...+.+.+.++..+. ++.++.+|+.+... ......+.
T Consensus 22 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 99 (277)
T 2rhc_B 22 SEVALVTGA-TSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGV-EADGRTCDVRSVPEIEALVAAVVERYGP 99 (277)
T ss_dssp SCEEEEETC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred CCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 466776665 55555544 44577999999999887776666655443 48888899865421 11111236
Q ss_pred CcEEEECC
Q 043853 138 PDIVISDP 145 (222)
Q Consensus 138 fD~ii~~p 145 (222)
+|++|.+.
T Consensus 100 iD~lv~~A 107 (277)
T 2rhc_B 100 VDVLVNNA 107 (277)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 89999875
No 447
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=77.31 E-value=5.9 Score=32.19 Aligned_cols=59 Identities=15% Similarity=0.042 Sum_probs=39.6
Q ss_pred CCeEEEEecccchhHHHHh----hcCCeEEEEe-CCHHHHHHHHHHHH-HcCCCcEEEEeCchhchh
Q 043853 68 SEIVLDLFCGTGTIGLTLA----RWVKHVYGYE-VVPQAISDACRNAK-LNNISNATFVQGDLNKIG 128 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la----~~~~~v~gvD-~~~~~i~~a~~n~~-~~~~~~v~~~~~d~~~~~ 128 (222)
++++|=.| |+|+++..++ +.+.+|+.++ .++..++.+.+.+. ..+ .++.++.+|+.+..
T Consensus 46 ~k~~lVTG-as~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~d~~ 110 (328)
T 2qhx_A 46 VPVALVTG-AAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP-NSAITVQADLSNVA 110 (328)
T ss_dssp CCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSSC
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcC-CeEEEEEeeCCCch
Confidence 45666555 5566665444 4577999999 99888777766664 333 35888888886643
No 448
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=77.26 E-value=4.2 Score=32.72 Aligned_cols=102 Identities=17% Similarity=0.113 Sum_probs=56.6
Q ss_pred CCeEEEEecccchhHHHHhh----cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh--hcCCCCCCCcEE
Q 043853 68 SEIVLDLFCGTGTIGLTLAR----WVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG--DFGNAFPKPDIV 141 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~----~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~--~~~~~~~~fD~i 141 (222)
+++||=.| |+|.++..+++ .+.+|++++.++.......+.+....-.+++++.+|+.+... ..... ..+|+|
T Consensus 5 ~~~vlVTG-atG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~~~d~v 82 (341)
T 3enk_A 5 KGTILVTG-GAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA-HPITAA 82 (341)
T ss_dssp SCEEEEET-TTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH-SCCCEE
T ss_pred CcEEEEec-CCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc-cCCcEE
Confidence 45666555 67777765553 467999998765443333333322212358899999866431 11100 268999
Q ss_pred EECCCCCCc-----------------cHHHHHHHHhCCCCcEEEEee
Q 043853 142 ISDPNRPGM-----------------HMKLIKFLLKLKAPRIVYVSC 171 (222)
Q Consensus 142 i~~pp~~~~-----------------~~~~~~~l~~l~~~~~v~~~~ 171 (222)
+.+...... ...+++.+...+.+.++++|+
T Consensus 83 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 129 (341)
T 3enk_A 83 IHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSS 129 (341)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred EECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 887532111 112333344445568888887
No 449
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=77.25 E-value=12 Score=28.82 Aligned_cols=76 Identities=17% Similarity=0.169 Sum_probs=49.1
Q ss_pred CCeEEEEecccchhHHHH----hhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh------hcCCCC-C
Q 043853 68 SEIVLDLFCGTGTIGLTL----ARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG------DFGNAF-P 136 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~l----a~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~------~~~~~~-~ 136 (222)
++++|=.|+ +|+++..+ ++.+.+|+.++.++...+.+.+.+...+. ++.++.+|+.+... ...... .
T Consensus 9 ~k~vlVTGa-s~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~g 86 (260)
T 2ae2_A 9 GCTALVTGG-SRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGF-KVEASVCDLSSRSERQELMNTVANHFHG 86 (260)
T ss_dssp TCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred CCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 567776664 55655544 44577999999998877776666654443 48888999866421 100011 3
Q ss_pred CCcEEEECC
Q 043853 137 KPDIVISDP 145 (222)
Q Consensus 137 ~fD~ii~~p 145 (222)
..|+++.+.
T Consensus 87 ~id~lv~~A 95 (260)
T 2ae2_A 87 KLNILVNNA 95 (260)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 689999875
No 450
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=77.24 E-value=12 Score=29.27 Aligned_cols=76 Identities=12% Similarity=0.100 Sum_probs=49.5
Q ss_pred CCeEEEEecccchhHH----HHhhcCCeEEEEeCC------------HHHHHHHHHHHHHcCCCcEEEEeCchhchhh--
Q 043853 68 SEIVLDLFCGTGTIGL----TLARWVKHVYGYEVV------------PQAISDACRNAKLNNISNATFVQGDLNKIGG-- 129 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~----~la~~~~~v~gvD~~------------~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~-- 129 (222)
++++|=.|++ |+++. .+++.+.+|+.+|.+ +..++...+.+...+. ++.++.+|+.+...
T Consensus 13 gk~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~ 90 (278)
T 3sx2_A 13 GKVAFITGAA-RGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGS-RIVARQADVRDRESLS 90 (278)
T ss_dssp TCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTC-CEEEEECCTTCHHHHH
T ss_pred CCEEEEECCC-ChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCC-eEEEEeCCCCCHHHHH
Confidence 5677777754 45444 445567899999987 7777776666665553 58999999865431
Q ss_pred ----hcCCCCCCCcEEEECC
Q 043853 130 ----DFGNAFPKPDIVISDP 145 (222)
Q Consensus 130 ----~~~~~~~~fD~ii~~p 145 (222)
......+..|++|.+.
T Consensus 91 ~~~~~~~~~~g~id~lv~nA 110 (278)
T 3sx2_A 91 AALQAGLDELGRLDIVVANA 110 (278)
T ss_dssp HHHHHHHHHHCCCCEEEECC
T ss_pred HHHHHHHHHcCCCCEEEECC
Confidence 1111113689999885
No 451
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=77.16 E-value=13 Score=28.97 Aligned_cols=76 Identities=16% Similarity=0.137 Sum_probs=49.4
Q ss_pred CCeEEEEecccchhHHHH----hhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhh------cCCCC-C
Q 043853 68 SEIVLDLFCGTGTIGLTL----ARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGD------FGNAF-P 136 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~l----a~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~------~~~~~-~ 136 (222)
++++|=.|+ +|+++..+ ++.+.+|+.++.++..++.+.+.+...+. ++.++.+|+.+...- ..... +
T Consensus 21 ~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~g 98 (273)
T 1ae1_A 21 GTTALVTGG-SKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGL-NVEGSVCDLLSRTERDKLMQTVAHVFDG 98 (273)
T ss_dssp TCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred CCEEEEECC-cchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 567776665 55555544 44577999999998887776666655443 488888998654211 10111 3
Q ss_pred CCcEEEECC
Q 043853 137 KPDIVISDP 145 (222)
Q Consensus 137 ~fD~ii~~p 145 (222)
..|+++.+.
T Consensus 99 ~id~lv~nA 107 (273)
T 1ae1_A 99 KLNILVNNA 107 (273)
T ss_dssp CCCEEEECC
T ss_pred CCcEEEECC
Confidence 689999875
No 452
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=77.12 E-value=7.3 Score=31.88 Aligned_cols=94 Identities=4% Similarity=-0.014 Sum_probs=52.4
Q ss_pred CC--CeEEEEec--ccchhHHHHhh-cCC-eEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEeCchhchhhhcCCCCCCCc
Q 043853 67 GS--EIVLDLFC--GTGTIGLTLAR-WVK-HVYGYEVVPQAISDACRNAKLNNISN-ATFVQGDLNKIGGDFGNAFPKPD 139 (222)
Q Consensus 67 ~~--~~vlDlg~--G~G~~~~~la~-~~~-~v~gvD~~~~~i~~a~~n~~~~~~~~-v~~~~~d~~~~~~~~~~~~~~fD 139 (222)
++ ++||-.|+ |.|...+.+++ .+. +|++++.+++..+.+++. .|.+. +.....+..+...... . ..+|
T Consensus 158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~---~g~~~~~d~~~~~~~~~~~~~~-~-~~~d 232 (357)
T 2zb4_A 158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE---LGFDAAINYKKDNVAEQLRESC-P-AGVD 232 (357)
T ss_dssp TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT---SCCSEEEETTTSCHHHHHHHHC-T-TCEE
T ss_pred CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH---cCCceEEecCchHHHHHHHHhc-C-CCCC
Confidence 36 89999987 35555555544 456 999999998877766542 35431 1111112222222211 1 1689
Q ss_pred EEEECCCCCCccHHHHHHHHhCCCCcEEEE
Q 043853 140 IVISDPNRPGMHMKLIKFLLKLKAPRIVYV 169 (222)
Q Consensus 140 ~ii~~pp~~~~~~~~~~~l~~l~~~~~v~~ 169 (222)
+++-+.- ...+...+..++++|.+.+
T Consensus 233 ~vi~~~G----~~~~~~~~~~l~~~G~iv~ 258 (357)
T 2zb4_A 233 VYFDNVG----GNISDTVISQMNENSHIIL 258 (357)
T ss_dssp EEEESCC----HHHHHHHHHTEEEEEEEEE
T ss_pred EEEECCC----HHHHHHHHHHhccCcEEEE
Confidence 9988753 1344445555677666543
No 453
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=77.06 E-value=4.7 Score=31.93 Aligned_cols=76 Identities=14% Similarity=0.089 Sum_probs=46.6
Q ss_pred CCeEEEEecccchhHHHH----hhcCCeEEEEeCCH-HHHHHHHHHHH-HcCCCcEEEEeCchhc----hh------hhc
Q 043853 68 SEIVLDLFCGTGTIGLTL----ARWVKHVYGYEVVP-QAISDACRNAK-LNNISNATFVQGDLNK----IG------GDF 131 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~l----a~~~~~v~gvD~~~-~~i~~a~~n~~-~~~~~~v~~~~~d~~~----~~------~~~ 131 (222)
++++|=.|+ +|+++..+ ++.+.+|+.++.++ ...+.+.+.+. ..+ .++.++.+|+.+ .. ...
T Consensus 23 ~k~~lVTGa-s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 100 (288)
T 2x9g_A 23 APAAVVTGA-AKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERS-NTAVVCQADLTNSNVLPASCEEIINSC 100 (288)
T ss_dssp CCEEEETTC-SSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred CCEEEEeCC-CCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcC-CceEEEEeecCCccCCHHHHHHHHHHH
Confidence 556666664 45555544 44577999999987 66665555554 333 358888999877 21 100
Q ss_pred CCCCCCCcEEEECC
Q 043853 132 GNAFPKPDIVISDP 145 (222)
Q Consensus 132 ~~~~~~fD~ii~~p 145 (222)
....+..|++|.+.
T Consensus 101 ~~~~g~iD~lvnnA 114 (288)
T 2x9g_A 101 FRAFGRCDVLVNNA 114 (288)
T ss_dssp HHHHSCCCEEEECC
T ss_pred HHhcCCCCEEEECC
Confidence 00113689999875
No 454
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=76.90 E-value=7.6 Score=30.50 Aligned_cols=76 Identities=13% Similarity=0.112 Sum_probs=50.2
Q ss_pred CCeEEEEecccchhHHH----HhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh------hcCCCCCC
Q 043853 68 SEIVLDLFCGTGTIGLT----LARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG------DFGNAFPK 137 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~----la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~------~~~~~~~~ 137 (222)
++++|=.| |+|+++.. +++.+.+|+.++.++...+...+.++..+. ++.++..|+.+... ......+.
T Consensus 28 ~k~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 105 (270)
T 3ftp_A 28 KQVAIVTG-ASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGL-EGRGAVLNVNDATAVDALVESTLKEFGA 105 (270)
T ss_dssp TCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTC-CCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence 55666555 45555554 445577999999999988888777776654 47788888765421 11111136
Q ss_pred CcEEEECC
Q 043853 138 PDIVISDP 145 (222)
Q Consensus 138 fD~ii~~p 145 (222)
.|++|.+.
T Consensus 106 iD~lvnnA 113 (270)
T 3ftp_A 106 LNVLVNNA 113 (270)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999885
No 455
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=76.84 E-value=26 Score=27.78 Aligned_cols=41 Identities=12% Similarity=-0.045 Sum_probs=29.9
Q ss_pred CeEEEEecccch--hHHHHhhcCCeEEEEeCCHHHHHHHHHHH
Q 043853 69 EIVLDLFCGTGT--IGLTLARWVKHVYGYEVVPQAISDACRNA 109 (222)
Q Consensus 69 ~~vlDlg~G~G~--~~~~la~~~~~v~gvD~~~~~i~~a~~n~ 109 (222)
++|.=+|+|.=+ ++..+++.+.+|+.+|.+++.++.+++.+
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i 58 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGI 58 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHH
Confidence 568888887533 34455666779999999999988876544
No 456
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=76.77 E-value=4.1 Score=33.47 Aligned_cols=90 Identities=12% Similarity=0.020 Sum_probs=51.6
Q ss_pred CeEEEEecc-cchhH-HHHh-hc-CCe-EEEEeCCHH---HHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcE
Q 043853 69 EIVLDLFCG-TGTIG-LTLA-RW-VKH-VYGYEVVPQ---AISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDI 140 (222)
Q Consensus 69 ~~vlDlg~G-~G~~~-~~la-~~-~~~-v~gvD~~~~---~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ 140 (222)
++||=.|+| .|.++ +.+| +. +.+ |+++|.+++ ..+.+++ .|.+.+.....|+.+ .... . +.+|+
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~----lGa~~v~~~~~~~~~-i~~~--~-gg~Dv 245 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEE----LDATYVDSRQTPVED-VPDV--Y-EQMDF 245 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHH----TTCEEEETTTSCGGG-HHHH--S-CCEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHH----cCCcccCCCccCHHH-HHHh--C-CCCCE
Confidence 899999974 35566 6666 53 444 999999887 7777653 455423111123333 2222 1 26899
Q ss_pred EEECCCCCCccHHHHHHHHhCCCCcEEEE
Q 043853 141 VISDPNRPGMHMKLIKFLLKLKAPRIVYV 169 (222)
Q Consensus 141 ii~~pp~~~~~~~~~~~l~~l~~~~~v~~ 169 (222)
||-... ....+...+..++++|.+..
T Consensus 246 vid~~g---~~~~~~~~~~~l~~~G~iv~ 271 (357)
T 2b5w_A 246 IYEATG---FPKHAIQSVQALAPNGVGAL 271 (357)
T ss_dssp EEECSC---CHHHHHHHHHHEEEEEEEEE
T ss_pred EEECCC---ChHHHHHHHHHHhcCCEEEE
Confidence 886542 12234455556677666553
No 457
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=76.60 E-value=9.2 Score=30.04 Aligned_cols=76 Identities=16% Similarity=0.083 Sum_probs=48.4
Q ss_pred CCeEEEEecccchhHHH----HhhcCCeEEEEeCCHHHHHHHHHHHHH-cCCCcEEEEeCchhchhh------hcCCCCC
Q 043853 68 SEIVLDLFCGTGTIGLT----LARWVKHVYGYEVVPQAISDACRNAKL-NNISNATFVQGDLNKIGG------DFGNAFP 136 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~----la~~~~~v~gvD~~~~~i~~a~~n~~~-~~~~~v~~~~~d~~~~~~------~~~~~~~ 136 (222)
++++|=.|++ |+++.. +++.+.+|+.++.++...+.+.+.+.. .+ .++.++.+|+.+... ......+
T Consensus 27 ~k~~lVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 104 (277)
T 4fc7_A 27 DKVAFITGGG-SGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATG-RRCLPLSMDVRAPPAVMAAVDQALKEFG 104 (277)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHS-SCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 5677766654 555544 444567999999998877666555533 23 358899999866421 1111113
Q ss_pred CCcEEEECC
Q 043853 137 KPDIVISDP 145 (222)
Q Consensus 137 ~fD~ii~~p 145 (222)
..|+++.+.
T Consensus 105 ~id~lv~nA 113 (277)
T 4fc7_A 105 RIDILINCA 113 (277)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 789999885
No 458
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=76.57 E-value=5.2 Score=29.93 Aligned_cols=66 Identities=17% Similarity=0.090 Sum_probs=42.9
Q ss_pred eEEEEecccchhHHHHh----hcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECC
Q 043853 70 IVLDLFCGTGTIGLTLA----RWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDP 145 (222)
Q Consensus 70 ~vlDlg~G~G~~~~~la----~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~p 145 (222)
+||=.| |+|.++..++ +.+.+|++++.++....... -++++++.+|+.+..... ...+|+||.+.
T Consensus 2 kilVtG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------~~~~~~~~~D~~d~~~~~---~~~~d~vi~~a 70 (224)
T 3h2s_A 2 KIAVLG-ATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL-------GATVATLVKEPLVLTEAD---LDSVDAVVDAL 70 (224)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT-------CTTSEEEECCGGGCCHHH---HTTCSEEEECC
T ss_pred EEEEEc-CCCHHHHHHHHHHHHCCCEEEEEEeccccccccc-------CCCceEEecccccccHhh---cccCCEEEECC
Confidence 445444 5677666554 34679999999987654321 135899999997764321 13689998876
Q ss_pred C
Q 043853 146 N 146 (222)
Q Consensus 146 p 146 (222)
.
T Consensus 71 g 71 (224)
T 3h2s_A 71 S 71 (224)
T ss_dssp C
T ss_pred c
Confidence 3
No 459
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=76.54 E-value=6.3 Score=30.60 Aligned_cols=76 Identities=16% Similarity=0.115 Sum_probs=49.6
Q ss_pred CCeEEEEecccchhHHHH----hhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh------hcCCCCCC
Q 043853 68 SEIVLDLFCGTGTIGLTL----ARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG------DFGNAFPK 137 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~l----a~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~------~~~~~~~~ 137 (222)
++++|=.|+ +|+++.++ ++.+.+|+.++.++..++.+.+.++..+. ++.++.+|+.+... ......+.
T Consensus 6 ~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 83 (257)
T 3imf_A 6 EKVVIITGG-SSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPG-QILTVQMDVRNTDDIQKMIEQIDEKFGR 83 (257)
T ss_dssp TCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTT-CEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 556666664 45555544 45577999999999988887776654432 58899999866421 11111136
Q ss_pred CcEEEECC
Q 043853 138 PDIVISDP 145 (222)
Q Consensus 138 fD~ii~~p 145 (222)
.|+++.+.
T Consensus 84 id~lv~nA 91 (257)
T 3imf_A 84 IDILINNA 91 (257)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999875
No 460
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=76.44 E-value=13 Score=29.06 Aligned_cols=76 Identities=16% Similarity=0.169 Sum_probs=49.7
Q ss_pred CCeEEEEecccchhHH----HHhhcCCeEEEEeCC------------HHHHHHHHHHHHHcCCCcEEEEeCchhchhh--
Q 043853 68 SEIVLDLFCGTGTIGL----TLARWVKHVYGYEVV------------PQAISDACRNAKLNNISNATFVQGDLNKIGG-- 129 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~----~la~~~~~v~gvD~~------------~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~-- 129 (222)
++++|=.|++ |+++. .+++.+.+|+.+|.+ ...++.+...+...+. ++.++.+|+.+...
T Consensus 10 gk~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~ 87 (287)
T 3pxx_A 10 DKVVLVTGGA-RGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGR-KAYTAEVDVRDRAAVS 87 (287)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTS-CEEEEECCTTCHHHHH
T ss_pred CCEEEEeCCC-ChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHH
Confidence 5677766655 44444 444567799999987 7777777766665543 58899999866431
Q ss_pred ----hcCCCCCCCcEEEECC
Q 043853 130 ----DFGNAFPKPDIVISDP 145 (222)
Q Consensus 130 ----~~~~~~~~fD~ii~~p 145 (222)
......+..|++|.+.
T Consensus 88 ~~~~~~~~~~g~id~lv~nA 107 (287)
T 3pxx_A 88 RELANAVAEFGKLDVVVANA 107 (287)
T ss_dssp HHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHcCCCCEEEECC
Confidence 1111113689999885
No 461
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=76.42 E-value=12 Score=29.36 Aligned_cols=76 Identities=13% Similarity=0.179 Sum_probs=49.1
Q ss_pred CCeEEEEecccchhHH----HHhhcCCeEEEEeCC----------------HHHHHHHHHHHHHcCCCcEEEEeCchhch
Q 043853 68 SEIVLDLFCGTGTIGL----TLARWVKHVYGYEVV----------------PQAISDACRNAKLNNISNATFVQGDLNKI 127 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~----~la~~~~~v~gvD~~----------------~~~i~~a~~n~~~~~~~~v~~~~~d~~~~ 127 (222)
++++|=.|++.| ++. .+++.+.+|+.+|.+ ++.++.+.+.+...+. ++.++..|+.+.
T Consensus 11 ~k~~lVTGas~g-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~ 88 (286)
T 3uve_A 11 GKVAFVTGAARG-QGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNR-RIVTAEVDVRDY 88 (286)
T ss_dssp TCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTC-CEEEEECCTTCH
T ss_pred CCEEEEeCCCch-HHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCC-ceEEEEcCCCCH
Confidence 567777776554 444 455567899999987 6777766666655443 588999998654
Q ss_pred hhh------cCCCCCCCcEEEECC
Q 043853 128 GGD------FGNAFPKPDIVISDP 145 (222)
Q Consensus 128 ~~~------~~~~~~~fD~ii~~p 145 (222)
..- .....+..|++|.+.
T Consensus 89 ~~v~~~~~~~~~~~g~id~lv~nA 112 (286)
T 3uve_A 89 DALKAAVDSGVEQLGRLDIIVANA 112 (286)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHHHhCCCCEEEECC
Confidence 211 111113689999885
No 462
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=76.42 E-value=12 Score=32.09 Aligned_cols=75 Identities=15% Similarity=-0.005 Sum_probs=49.3
Q ss_pred CCCeEEEEecccchhHH-HHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECC
Q 043853 67 GSEIVLDLFCGTGTIGL-TLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDP 145 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~-~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~p 145 (222)
+.++|+=+|.|.-+..+ ...+...++.-+|.+++.++.+.+. ++++.+++||..+...-........|++++--
T Consensus 234 ~~~~v~I~GgG~ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~-----l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~T 308 (461)
T 4g65_A 234 PYRRIMIVGGGNIGASLAKRLEQTYSVKLIERNLQRAEKLSEE-----LENTIVFCGDAADQELLTEENIDQVDVFIALT 308 (461)
T ss_dssp CCCEEEEECCSHHHHHHHHHHTTTSEEEEEESCHHHHHHHHHH-----CTTSEEEESCTTCHHHHHHTTGGGCSEEEECC
T ss_pred cccEEEEEcchHHHHHHHHHhhhcCceEEEecCHHHHHHHHHH-----CCCceEEeccccchhhHhhcCchhhcEEEEcc
Confidence 45678777766433332 2222345899999999888887665 35688999999876422222234789998865
Q ss_pred C
Q 043853 146 N 146 (222)
Q Consensus 146 p 146 (222)
.
T Consensus 309 ~ 309 (461)
T 4g65_A 309 N 309 (461)
T ss_dssp S
T ss_pred c
Confidence 4
No 463
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=76.33 E-value=12 Score=29.23 Aligned_cols=76 Identities=14% Similarity=0.149 Sum_probs=49.8
Q ss_pred CCeEEEEecccchhHH----HHhhcCCeEEEEeC-------------CHHHHHHHHHHHHHcCCCcEEEEeCchhchhh-
Q 043853 68 SEIVLDLFCGTGTIGL----TLARWVKHVYGYEV-------------VPQAISDACRNAKLNNISNATFVQGDLNKIGG- 129 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~----~la~~~~~v~gvD~-------------~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~- 129 (222)
++++|=.|++. +++. .+++.+.+|+.+|. ++..++.+.+.+...+. ++.++..|+.+...
T Consensus 15 gk~~lVTGas~-gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v 92 (280)
T 3pgx_A 15 GRVAFITGAAR-GQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGR-KALTRVLDVRDDAAL 92 (280)
T ss_dssp TCEEEEESTTS-HHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHH
T ss_pred CCEEEEECCCc-HHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHH
Confidence 56777777654 4444 44556789999998 67777777777665553 58888999865421
Q ss_pred -----hcCCCCCCCcEEEECC
Q 043853 130 -----DFGNAFPKPDIVISDP 145 (222)
Q Consensus 130 -----~~~~~~~~fD~ii~~p 145 (222)
......+..|+++.+.
T Consensus 93 ~~~~~~~~~~~g~id~lvnnA 113 (280)
T 3pgx_A 93 RELVADGMEQFGRLDVVVANA 113 (280)
T ss_dssp HHHHHHHHHHHCCCCEEEECC
T ss_pred HHHHHHHHHHcCCCCEEEECC
Confidence 1111113689999885
No 464
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=76.30 E-value=16 Score=25.40 Aligned_cols=82 Identities=12% Similarity=0.116 Sum_probs=51.7
Q ss_pred CeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCCCCC-ccHHHHHHHHhCCCC-cEE
Q 043853 90 KHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPG-MHMKLIKFLLKLKAP-RIV 167 (222)
Q Consensus 90 ~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~~-~~~~~~~~l~~l~~~-~~v 167 (222)
.+|.-+|-++...+..+..++..|.. +.....+..+....+......+|+|++|....+ -...+++.++...+. .++
T Consensus 37 ~~Ilivdd~~~~~~~l~~~L~~~g~~-v~~~~~~~~~al~~l~~~~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~ii 115 (157)
T 3hzh_A 37 FNVLIVDDSVFTVKQLTQIFTSEGFN-IIDTAADGEEAVIKYKNHYPNIDIVTLXITMPKMDGITCLSNIMEFDKNARVI 115 (157)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCE-EEEEESSHHHHHHHHHHHGGGCCEEEECSSCSSSCHHHHHHHHHHHCTTCCEE
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCe-EEEEECCHHHHHHHHHhcCCCCCEEEEeccCCCccHHHHHHHHHhhCCCCcEE
Confidence 38999999999999999998877653 332455665554333211116899999974322 235677777764443 445
Q ss_pred EEeeC
Q 043853 168 YVSCN 172 (222)
Q Consensus 168 ~~~~~ 172 (222)
+++..
T Consensus 116 ~ls~~ 120 (157)
T 3hzh_A 116 MISAL 120 (157)
T ss_dssp EEESC
T ss_pred EEecc
Confidence 54443
No 465
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=75.94 E-value=13 Score=28.86 Aligned_cols=76 Identities=17% Similarity=0.171 Sum_probs=48.9
Q ss_pred CCeEEEEecccchhHHHH----hhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh------hcCCCCCC
Q 043853 68 SEIVLDLFCGTGTIGLTL----ARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG------DFGNAFPK 137 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~l----a~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~------~~~~~~~~ 137 (222)
++++|=.|+ +|+++..+ ++.+.+|+.++.++..++.+.+.+...+. ++.++.+|+.+... ......+.
T Consensus 7 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 84 (262)
T 1zem_A 7 GKVCLVTGA-GGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGV-EARSYVCDVTSEEAVIGTVDSVVRDFGK 84 (262)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTS-CEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 566776665 55555544 44577999999998887776666654443 48888899865421 11111136
Q ss_pred CcEEEECC
Q 043853 138 PDIVISDP 145 (222)
Q Consensus 138 fD~ii~~p 145 (222)
+|++|.+.
T Consensus 85 id~lv~nA 92 (262)
T 1zem_A 85 IDFLFNNA 92 (262)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999875
No 466
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=75.12 E-value=17 Score=24.93 Aligned_cols=82 Identities=15% Similarity=0.061 Sum_probs=52.0
Q ss_pred CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEEECCCCC-CccHHHHHHHHhCCCCc-E
Q 043853 89 VKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRP-GMHMKLIKFLLKLKAPR-I 166 (222)
Q Consensus 89 ~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~~pp~~-~~~~~~~~~l~~l~~~~-~ 166 (222)
..+|.-+|-++...+..+..+...+...+-....+..+....+.. ..+|+|++|.... .-...+++.++...+.. +
T Consensus 15 ~~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~--~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~i 92 (152)
T 3eul_A 15 KVRVVVGDDHPLFREGVVRALSLSGSVNVVGEADDGAAALELIKA--HLPDVALLDYRMPGMDGAQVAAAVRSYELPTRV 92 (152)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHSSEEEEEEESSHHHHHHHHHH--HCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEE
T ss_pred eEEEEEEcCCHHHHHHHHHHHhhCCCeEEEEEeCCHHHHHHHHHh--cCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeE
Confidence 448999999999999999888877642223345566555433221 3699999986422 22457777777755543 4
Q ss_pred EEEeeC
Q 043853 167 VYVSCN 172 (222)
Q Consensus 167 v~~~~~ 172 (222)
++++..
T Consensus 93 i~~s~~ 98 (152)
T 3eul_A 93 LLISAH 98 (152)
T ss_dssp EEEESC
T ss_pred EEEEcc
Confidence 444443
No 467
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=75.09 E-value=6.5 Score=32.46 Aligned_cols=77 Identities=23% Similarity=0.117 Sum_probs=46.2
Q ss_pred CCeEEEEecccchhHHHHhh---cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchh--hhcCCCCCCCcEEE
Q 043853 68 SEIVLDLFCGTGTIGLTLAR---WVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIG--GDFGNAFPKPDIVI 142 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~---~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~--~~~~~~~~~fD~ii 142 (222)
.++|+=+||| ..+..+++ ....++..|.+...++.+++ .+..+..|+.+.. ..+. ...|+|+
T Consensus 16 ~mkilvlGaG--~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~~--------~~~~~~~d~~d~~~l~~~~---~~~DvVi 82 (365)
T 3abi_A 16 HMKVLILGAG--NIGRAIAWDLKDEFDVYIGDVNNENLEKVKE--------FATPLKVDASNFDKLVEVM---KEFELVI 82 (365)
T ss_dssp CCEEEEECCS--HHHHHHHHHHTTTSEEEEEESCHHHHHHHTT--------TSEEEECCTTCHHHHHHHH---TTCSEEE
T ss_pred ccEEEEECCC--HHHHHHHHHHhcCCCeEEEEcCHHHHHHHhc--------cCCcEEEecCCHHHHHHHH---hCCCEEE
Confidence 5789999985 44443332 34589999999888776643 2345556664432 1111 3689998
Q ss_pred ECCCCCCccHHHHHHH
Q 043853 143 SDPNRPGMHMKLIKFL 158 (222)
Q Consensus 143 ~~pp~~~~~~~~~~~l 158 (222)
..-|.. +...+.+..
T Consensus 83 ~~~p~~-~~~~v~~~~ 97 (365)
T 3abi_A 83 GALPGF-LGFKSIKAA 97 (365)
T ss_dssp ECCCGG-GHHHHHHHH
T ss_pred EecCCc-ccchHHHHH
Confidence 876522 344454443
No 468
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=74.91 E-value=15 Score=28.56 Aligned_cols=77 Identities=10% Similarity=0.008 Sum_probs=48.5
Q ss_pred CCeEEEEecccchhHHHH----hhcCCeEEEEeCCHHHHHHHHHHHHHcC-CCcEEEEeCchhchhh--h----cCCCCC
Q 043853 68 SEIVLDLFCGTGTIGLTL----ARWVKHVYGYEVVPQAISDACRNAKLNN-ISNATFVQGDLNKIGG--D----FGNAFP 136 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~l----a~~~~~v~gvD~~~~~i~~a~~n~~~~~-~~~v~~~~~d~~~~~~--~----~~~~~~ 136 (222)
++++|=.|+ +|+++..+ ++.+.+|+.++.++...+.+.+.+.... -.++.++.+|+.+... . .....+
T Consensus 13 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 91 (267)
T 1iy8_A 13 DRVVLITGG-GSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG 91 (267)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 566776665 55555544 4457799999999887776666654431 1258888899865421 1 000113
Q ss_pred CCcEEEECC
Q 043853 137 KPDIVISDP 145 (222)
Q Consensus 137 ~fD~ii~~p 145 (222)
.+|++|.+.
T Consensus 92 ~id~lv~nA 100 (267)
T 1iy8_A 92 RIDGFFNNA 100 (267)
T ss_dssp CCSEEEECC
T ss_pred CCCEEEECC
Confidence 689999875
No 469
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=74.75 E-value=7.2 Score=30.74 Aligned_cols=77 Identities=13% Similarity=0.009 Sum_probs=51.0
Q ss_pred CCCeEEEEecccchhHH----HHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh------hcCCCCC
Q 043853 67 GSEIVLDLFCGTGTIGL----TLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG------DFGNAFP 136 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~----~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~------~~~~~~~ 136 (222)
.++++|=.|++ |+++. .+++.+.+|+.++.++..++.+.+.++..+. ++.++.+|+.+... ......+
T Consensus 31 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~~~~g 108 (276)
T 3r1i_A 31 SGKRALITGAS-TGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGG-KALPIRCDVTQPDQVRGMLDQMTGELG 108 (276)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 35677766655 45554 4445677999999998888877777766553 47888889865431 1111113
Q ss_pred CCcEEEECC
Q 043853 137 KPDIVISDP 145 (222)
Q Consensus 137 ~fD~ii~~p 145 (222)
..|++|.+.
T Consensus 109 ~iD~lvnnA 117 (276)
T 3r1i_A 109 GIDIAVCNA 117 (276)
T ss_dssp CCSEEEECC
T ss_pred CCCEEEECC
Confidence 689999875
No 470
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=74.64 E-value=11 Score=29.54 Aligned_cols=77 Identities=17% Similarity=0.137 Sum_probs=49.3
Q ss_pred CCeEEEEecccchhHHHH----hhcCCeEEEEeCCHHHHHHHHHHHHHcCCC--cEEEEeCchhchhh------hcCCCC
Q 043853 68 SEIVLDLFCGTGTIGLTL----ARWVKHVYGYEVVPQAISDACRNAKLNNIS--NATFVQGDLNKIGG------DFGNAF 135 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~l----a~~~~~v~gvD~~~~~i~~a~~n~~~~~~~--~v~~~~~d~~~~~~------~~~~~~ 135 (222)
++++|=.| |+|+++..+ ++.+.+|+.++.++..++.+.+.+...+.. ++.++.+|+.+... ......
T Consensus 6 ~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (280)
T 1xkq_A 6 NKTVIITG-SSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF 84 (280)
T ss_dssp TCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence 45666666 455555544 445779999999998877776666544431 58899999866421 111111
Q ss_pred CCCcEEEECC
Q 043853 136 PKPDIVISDP 145 (222)
Q Consensus 136 ~~fD~ii~~p 145 (222)
+.+|++|.+.
T Consensus 85 g~iD~lv~nA 94 (280)
T 1xkq_A 85 GKIDVLVNNA 94 (280)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 3689999875
No 471
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=74.48 E-value=7.7 Score=30.69 Aligned_cols=74 Identities=16% Similarity=0.157 Sum_probs=46.8
Q ss_pred CCCeEEEEecccchhHHHH----hhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh--hcCCCCCCCcE
Q 043853 67 GSEIVLDLFCGTGTIGLTL----ARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG--DFGNAFPKPDI 140 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~l----a~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~--~~~~~~~~fD~ 140 (222)
.++++|=.|++ |+++.++ ++.+.+|+.++.++...+.+.+.+ + .+++++..|+.+... .+.......|+
T Consensus 15 ~gk~vlVTGas-~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dl~d~~~v~~~~~~~~~iD~ 89 (291)
T 3rd5_A 15 AQRTVVITGAN-SGLGAVTARELARRGATVIMAVRDTRKGEAAARTM---A-GQVEVRELDLQDLSSVRRFADGVSGADV 89 (291)
T ss_dssp TTCEEEEECCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS---S-SEEEEEECCTTCHHHHHHHHHTCCCEEE
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---c-CCeeEEEcCCCCHHHHHHHHHhcCCCCE
Confidence 35677766654 5555544 445779999999988766554432 2 258999999866531 11111136899
Q ss_pred EEECC
Q 043853 141 VISDP 145 (222)
Q Consensus 141 ii~~p 145 (222)
+|.+.
T Consensus 90 lv~nA 94 (291)
T 3rd5_A 90 LINNA 94 (291)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 98875
No 472
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=74.46 E-value=8.7 Score=29.80 Aligned_cols=78 Identities=5% Similarity=-0.114 Sum_probs=50.5
Q ss_pred CCeEEEEecc--cch---hHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh------hcCCCCC
Q 043853 68 SEIVLDLFCG--TGT---IGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG------DFGNAFP 136 (222)
Q Consensus 68 ~~~vlDlg~G--~G~---~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~------~~~~~~~ 136 (222)
++++|=.|++ +|. ++..+++.+.+|+.++.++...+.+.+.....+-.++.++.+|+.+... ......+
T Consensus 7 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (266)
T 3oig_A 7 GRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQVG 86 (266)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHHS
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 6788888866 233 2335566678999999987666666666665554458899999865431 1111113
Q ss_pred CCcEEEECC
Q 043853 137 KPDIVISDP 145 (222)
Q Consensus 137 ~fD~ii~~p 145 (222)
.+|+++.+.
T Consensus 87 ~id~li~~A 95 (266)
T 3oig_A 87 VIHGIAHCI 95 (266)
T ss_dssp CCCEEEECC
T ss_pred CeeEEEEcc
Confidence 689998875
No 473
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=74.45 E-value=40 Score=28.79 Aligned_cols=94 Identities=18% Similarity=0.140 Sum_probs=55.2
Q ss_pred CeEEEEecccch--hHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHc-------C------CC--cEEEEeCchhchhhhc
Q 043853 69 EIVLDLFCGTGT--IGLTLARWVKHVYGYEVVPQAISDACRNAKLN-------N------IS--NATFVQGDLNKIGGDF 131 (222)
Q Consensus 69 ~~vlDlg~G~G~--~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~-------~------~~--~v~~~~~d~~~~~~~~ 131 (222)
++|.=+|+|.=+ ++..+++.+.+|+.+|.+++.++.+++.+..+ + .+ ...+ ..|... .
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~-~--- 112 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKE-L--- 112 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGGG-G---
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHHH-H---
Confidence 468888888633 33355666779999999999988887644311 1 00 1233 344421 1
Q ss_pred CCCCCCCcEEEECCCCC-CccHHHHHHHHh-CCCCcEEEEee
Q 043853 132 GNAFPKPDIVISDPNRP-GMHMKLIKFLLK-LKAPRIVYVSC 171 (222)
Q Consensus 132 ~~~~~~fD~ii~~pp~~-~~~~~~~~~l~~-l~~~~~v~~~~ 171 (222)
...|+||..-|.. .....+...+.. ++++.++..++
T Consensus 113 ----~~aDlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snT 150 (463)
T 1zcj_A 113 ----STVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNT 150 (463)
T ss_dssp ----TTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred ----CCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCC
Confidence 2589999887742 123455555554 55666555333
No 474
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=74.44 E-value=17 Score=28.38 Aligned_cols=76 Identities=14% Similarity=0.156 Sum_probs=49.4
Q ss_pred CCeEEEEecccchhHH----HHhhcCCeEEEEeC-------------CHHHHHHHHHHHHHcCCCcEEEEeCchhchhh-
Q 043853 68 SEIVLDLFCGTGTIGL----TLARWVKHVYGYEV-------------VPQAISDACRNAKLNNISNATFVQGDLNKIGG- 129 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~----~la~~~~~v~gvD~-------------~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~- 129 (222)
++++|=.|++. +++. .+++.+.+|+.+|. ++..++.+.+.+...+. ++.++.+|+.+...
T Consensus 11 ~k~~lVTGas~-GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v 88 (277)
T 3tsc_A 11 GRVAFITGAAR-GQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANR-RIVAAVVDTRDFDRL 88 (277)
T ss_dssp TCEEEEESTTS-HHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHH
T ss_pred CCEEEEECCcc-HHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHH
Confidence 56777777554 4444 44556789999998 67777777666665543 58889999866431
Q ss_pred -----hcCCCCCCCcEEEECC
Q 043853 130 -----DFGNAFPKPDIVISDP 145 (222)
Q Consensus 130 -----~~~~~~~~fD~ii~~p 145 (222)
......+..|++|.+.
T Consensus 89 ~~~~~~~~~~~g~id~lvnnA 109 (277)
T 3tsc_A 89 RKVVDDGVAALGRLDIIVANA 109 (277)
T ss_dssp HHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHcCCCCEEEECC
Confidence 1111113689999885
No 475
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=74.41 E-value=17 Score=28.60 Aligned_cols=76 Identities=13% Similarity=0.131 Sum_probs=49.0
Q ss_pred CCeEEEEecccchhHH----HHhhcCCeEEEEeC-CHHHHHHHHHHHHHcCCCcEEEEeCchhchhh------hcCCCCC
Q 043853 68 SEIVLDLFCGTGTIGL----TLARWVKHVYGYEV-VPQAISDACRNAKLNNISNATFVQGDLNKIGG------DFGNAFP 136 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~----~la~~~~~v~gvD~-~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~------~~~~~~~ 136 (222)
++++|=.|++ |+++. .+++.+.+|+.++. ++...+...+.+...+. ++.++.+|+.+... ......+
T Consensus 29 ~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 106 (280)
T 4da9_A 29 RPVAIVTGGR-RGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGA-RVIFLRADLADLSSHQATVDAVVAEFG 106 (280)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTC-CEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred CCEEEEecCC-CHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 5667766654 44444 44456779999995 77777777776666553 58999999876431 1111113
Q ss_pred CCcEEEECC
Q 043853 137 KPDIVISDP 145 (222)
Q Consensus 137 ~fD~ii~~p 145 (222)
..|++|.+.
T Consensus 107 ~iD~lvnnA 115 (280)
T 4da9_A 107 RIDCLVNNA 115 (280)
T ss_dssp CCCEEEEEC
T ss_pred CCCEEEECC
Confidence 689998875
No 476
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=74.27 E-value=12 Score=28.99 Aligned_cols=76 Identities=12% Similarity=0.066 Sum_probs=49.0
Q ss_pred CCeEEEEecccchhHHHHh----hcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh------hcCCC-CC
Q 043853 68 SEIVLDLFCGTGTIGLTLA----RWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG------DFGNA-FP 136 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la----~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~------~~~~~-~~ 136 (222)
++++|=.| |+|+++..++ +.+.+|+.++.++...+.+.+.++..+. ++.++.+|+.+... ..... .+
T Consensus 5 ~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~~g 82 (260)
T 2qq5_A 5 GQVCVVTG-ASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGG-QCVPVVCDSSQESEVRSLFEQVDREQQG 82 (260)
T ss_dssp TCEEEESS-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSS-EEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCC-ceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 45666666 5556665444 4577999999998887776666654442 58888999865421 11000 24
Q ss_pred CCcEEEECC
Q 043853 137 KPDIVISDP 145 (222)
Q Consensus 137 ~fD~ii~~p 145 (222)
.+|+++.+.
T Consensus 83 ~id~lvnnA 91 (260)
T 2qq5_A 83 RLDVLVNNA 91 (260)
T ss_dssp CCCEEEECC
T ss_pred CceEEEECC
Confidence 789999886
No 477
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=73.89 E-value=5.6 Score=31.51 Aligned_cols=76 Identities=16% Similarity=0.046 Sum_probs=49.5
Q ss_pred CCeEEEEecccchhHH----HHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh------hcCCCCCC
Q 043853 68 SEIVLDLFCGTGTIGL----TLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG------DFGNAFPK 137 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~----~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~------~~~~~~~~ 137 (222)
++++|=.|++ |+++. .+++.+.+|+.++.++..++.+.+.+...+. ++.++.+|+.+... ......+.
T Consensus 8 gk~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 85 (280)
T 3tox_A 8 GKIAIVTGAS-SGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGG-EAAALAGDVGDEALHEALVELAVRRFGG 85 (280)
T ss_dssp TCEEEESSTT-SHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTC-CEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5667766655 44444 4445677999999999888777766654333 48889999866421 11111136
Q ss_pred CcEEEECC
Q 043853 138 PDIVISDP 145 (222)
Q Consensus 138 fD~ii~~p 145 (222)
.|++|.+.
T Consensus 86 iD~lvnnA 93 (280)
T 3tox_A 86 LDTAFNNA 93 (280)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999875
No 478
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=73.84 E-value=6.3 Score=32.46 Aligned_cols=93 Identities=13% Similarity=0.012 Sum_probs=54.1
Q ss_pred CCCCeEEEEeccc-chhHHHHhh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeC---chhchhhhcCCCCCCCcE
Q 043853 66 DGSEIVLDLFCGT-GTIGLTLAR-WVKHVYGYEVVPQAISDACRNAKLNNISNATFVQG---DLNKIGGDFGNAFPKPDI 140 (222)
Q Consensus 66 ~~~~~vlDlg~G~-G~~~~~la~-~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~---d~~~~~~~~~~~~~~fD~ 140 (222)
.++++||=.|+|. |..++.+++ .+.+|+++|.++..++.+++ .|.+. ++.. |+.+...... ....+|+
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~--vi~~~~~~~~~~v~~~~-~g~g~D~ 260 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFA----LGADH--GINRLEEDWVERVYALT-GDRGADH 260 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HTCSE--EEETTTSCHHHHHHHHH-TTCCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHH----cCCCE--EEcCCcccHHHHHHHHh-CCCCceE
Confidence 3588999999763 555556665 35699999999988888755 45542 2222 2222221111 1236999
Q ss_pred EEECCCCCCccHHHHHHHHhCCCCcEEEE
Q 043853 141 VISDPNRPGMHMKLIKFLLKLKAPRIVYV 169 (222)
Q Consensus 141 ii~~pp~~~~~~~~~~~l~~l~~~~~v~~ 169 (222)
++-... .. .+...+..++++|.+.+
T Consensus 261 vid~~g-~~---~~~~~~~~l~~~G~iv~ 285 (363)
T 3uog_A 261 ILEIAG-GA---GLGQSLKAVAPDGRISV 285 (363)
T ss_dssp EEEETT-SS---CHHHHHHHEEEEEEEEE
T ss_pred EEECCC-hH---HHHHHHHHhhcCCEEEE
Confidence 887654 22 23344455566666543
No 479
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=73.76 E-value=14 Score=29.26 Aligned_cols=76 Identities=17% Similarity=0.161 Sum_probs=49.0
Q ss_pred CCeEEEEecccchhHHHHh----hcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh------hcCCCCCC
Q 043853 68 SEIVLDLFCGTGTIGLTLA----RWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG------DFGNAFPK 137 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la----~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~------~~~~~~~~ 137 (222)
++++|=.|+ +|+++..++ +.+.+|+.++.++...+.+.+.++..+. ++.++.+|+.+... ......+.
T Consensus 34 ~k~vlVTGa-s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 111 (291)
T 3cxt_A 34 GKIALVTGA-SYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGI-NAHGYVCDVTDEDGIQAMVAQIESEVGI 111 (291)
T ss_dssp TCEEEEETC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 566776664 566555444 4577999999998887776666655443 47888888865421 11111236
Q ss_pred CcEEEECC
Q 043853 138 PDIVISDP 145 (222)
Q Consensus 138 fD~ii~~p 145 (222)
.|++|.+.
T Consensus 112 iD~lvnnA 119 (291)
T 3cxt_A 112 IDILVNNA 119 (291)
T ss_dssp CCEEEECC
T ss_pred CcEEEECC
Confidence 89999875
No 480
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=73.72 E-value=31 Score=27.14 Aligned_cols=92 Identities=18% Similarity=0.125 Sum_probs=52.5
Q ss_pred CeEEEEecccch--hHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHc---------CCC---------cEEEEeCchhchh
Q 043853 69 EIVLDLFCGTGT--IGLTLARWVKHVYGYEVVPQAISDACRNAKLN---------NIS---------NATFVQGDLNKIG 128 (222)
Q Consensus 69 ~~vlDlg~G~G~--~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~---------~~~---------~v~~~~~d~~~~~ 128 (222)
++|.=+|+|.=+ ++..++..+.+|+.+|.+++.++.+++.+... ++. ++.. ..|..+..
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~~~~ 83 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLAQAV 83 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHHHHh
Confidence 466667776422 22244455679999999999998887764321 111 1222 23333321
Q ss_pred hhcCCCCCCCcEEEECCCCC-CccHHHHHHHHh-CCCCcEEE
Q 043853 129 GDFGNAFPKPDIVISDPNRP-GMHMKLIKFLLK-LKAPRIVY 168 (222)
Q Consensus 129 ~~~~~~~~~fD~ii~~pp~~-~~~~~~~~~l~~-l~~~~~v~ 168 (222)
...|+|+..-|.. .....+...+.. ++++.++.
T Consensus 84 -------~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~ 118 (283)
T 4e12_A 84 -------KDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFA 118 (283)
T ss_dssp -------TTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred -------ccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEE
Confidence 2589998887633 244555555654 45555544
No 481
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=73.14 E-value=21 Score=27.40 Aligned_cols=70 Identities=14% Similarity=0.119 Sum_probs=43.3
Q ss_pred EEEEecccchhHHH----HhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchh------hhcCCCCCCCcE
Q 043853 71 VLDLFCGTGTIGLT----LARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIG------GDFGNAFPKPDI 140 (222)
Q Consensus 71 vlDlg~G~G~~~~~----la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~------~~~~~~~~~fD~ 140 (222)
+|=.| |+|+++.. +++.+.+|+.++.++..++.+.+.+ + .++.++.+|+.+.. .......+..|+
T Consensus 3 vlVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 77 (248)
T 3asu_A 3 VLVTG-ATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL---G-DNLYIAQLDVRNRAAIEEMLASLPAEWCNIDI 77 (248)
T ss_dssp EEETT-TTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C-TTEEEEECCTTCHHHHHHHHHTSCTTTCCCCE
T ss_pred EEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---c-CceEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 44344 44555544 4455779999999987766655443 2 25888888886542 111222347899
Q ss_pred EEECC
Q 043853 141 VISDP 145 (222)
Q Consensus 141 ii~~p 145 (222)
++.+.
T Consensus 78 lvnnA 82 (248)
T 3asu_A 78 LVNNA 82 (248)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 99875
No 482
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=73.14 E-value=18 Score=27.87 Aligned_cols=76 Identities=18% Similarity=0.243 Sum_probs=47.8
Q ss_pred CCeEEEEecccchhHHHH----hhcCCeEEEEeCCHHHHHHHHHHHHHc-CCCcEEEEeCchhchhh------hcCCCCC
Q 043853 68 SEIVLDLFCGTGTIGLTL----ARWVKHVYGYEVVPQAISDACRNAKLN-NISNATFVQGDLNKIGG------DFGNAFP 136 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~l----a~~~~~v~gvD~~~~~i~~a~~n~~~~-~~~~v~~~~~d~~~~~~------~~~~~~~ 136 (222)
++++|=.|+ +|+++..+ ++.+.+|+.++.++...+.+.+.+... +. ++.++.+|+.+... ......+
T Consensus 7 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g 84 (263)
T 3ai3_A 7 GKVAVITGS-SSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGV-RVLEVAVDVATPEGVDAVVESVRSSFG 84 (263)
T ss_dssp TCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECC-CchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 566776664 45555544 445779999999988777665555433 33 58888899865421 1100112
Q ss_pred CCcEEEECC
Q 043853 137 KPDIVISDP 145 (222)
Q Consensus 137 ~fD~ii~~p 145 (222)
..|++|.+.
T Consensus 85 ~id~lv~~A 93 (263)
T 3ai3_A 85 GADILVNNA 93 (263)
T ss_dssp SCSEEEECC
T ss_pred CCCEEEECC
Confidence 689999875
No 483
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=72.95 E-value=17 Score=27.01 Aligned_cols=94 Identities=18% Similarity=0.207 Sum_probs=56.8
Q ss_pred eEEEEecccchhHHH----Hh-hcCCeEEEEeCCHH-HHHHHHHHHHHcCCCcEEEEeCchhchhh--hcCCCCCCCcEE
Q 043853 70 IVLDLFCGTGTIGLT----LA-RWVKHVYGYEVVPQ-AISDACRNAKLNNISNATFVQGDLNKIGG--DFGNAFPKPDIV 141 (222)
Q Consensus 70 ~vlDlg~G~G~~~~~----la-~~~~~v~gvD~~~~-~i~~a~~n~~~~~~~~v~~~~~d~~~~~~--~~~~~~~~fD~i 141 (222)
+||=.| |+|.++.. ++ +.+.+|++++.++. .++... .. ..+++++.+|+.+... ... ...|++
T Consensus 7 ~vlVtG-asg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~-~~~~~~~~~D~~d~~~~~~~~---~~~d~v 77 (221)
T 3r6d_A 7 YITILG-AAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----ID-HERVTVIEGSFQNPGXLEQAV---TNAEVV 77 (221)
T ss_dssp EEEEES-TTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HT-STTEEEEECCTTCHHHHHHHH---TTCSEE
T ss_pred EEEEEe-CCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cC-CCceEEEECCCCCHHHHHHHH---cCCCEE
Confidence 466565 45655554 34 45669999999987 544332 11 2358999999976431 111 368999
Q ss_pred EECCCCCCc-cHHHHHHHHhCCCCcEEEEeeC
Q 043853 142 ISDPNRPGM-HMKLIKFLLKLKAPRIVYVSCN 172 (222)
Q Consensus 142 i~~pp~~~~-~~~~~~~l~~l~~~~~v~~~~~ 172 (222)
|.+.....+ ...+++.+...+.+.++++++.
T Consensus 78 v~~ag~~n~~~~~~~~~~~~~~~~~iv~iSs~ 109 (221)
T 3r6d_A 78 FVGAMESGSDMASIVKALSRXNIRRVIGVSMA 109 (221)
T ss_dssp EESCCCCHHHHHHHHHHHHHTTCCEEEEEEET
T ss_pred EEcCCCCChhHHHHHHHHHhcCCCeEEEEeec
Confidence 998753211 3444555554455678888873
No 484
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=72.88 E-value=28 Score=26.63 Aligned_cols=68 Identities=18% Similarity=0.066 Sum_probs=39.2
Q ss_pred CCCeEEEEecccchhHHHH----hhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhhcCCCCCCCcEEE
Q 043853 67 GSEIVLDLFCGTGTIGLTL----ARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVI 142 (222)
Q Consensus 67 ~~~~vlDlg~G~G~~~~~l----a~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ii 142 (222)
.++++|=.|+ +|+++..+ ++.+.+|+.++.++..++ ..+ ++.++ +|+.+-...+......+|++|
T Consensus 18 ~~k~vlVTGa-s~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-------~~~--~~~~~-~D~~~~~~~~~~~~~~iD~lv 86 (249)
T 1o5i_A 18 RDKGVLVLAA-SRGIGRAVADVLSQEGAEVTICARNEELLK-------RSG--HRYVV-CDLRKDLDLLFEKVKEVDILV 86 (249)
T ss_dssp TTCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHH-------HTC--SEEEE-CCTTTCHHHHHHHSCCCSEEE
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHH-------hhC--CeEEE-eeHHHHHHHHHHHhcCCCEEE
Confidence 3667776665 45555544 445779999999973322 112 46666 887322221111112689999
Q ss_pred ECC
Q 043853 143 SDP 145 (222)
Q Consensus 143 ~~p 145 (222)
.+.
T Consensus 87 ~~A 89 (249)
T 1o5i_A 87 LNA 89 (249)
T ss_dssp ECC
T ss_pred ECC
Confidence 875
No 485
>1yf3_A DNA adenine methylase; T4DAM, methyltransferase, transferase-DNA complex; HET: DNA SAH; 2.29A {Enterobacteria phage T4} SCOP: c.66.1.28 PDB: 1yfj_A* 1yfl_A* 1q0s_A* 1q0t_A*
Probab=72.67 E-value=2.8 Score=33.16 Aligned_cols=43 Identities=19% Similarity=0.322 Sum_probs=31.4
Q ss_pred HHHHHHHhcCCCCCCCeEEEEecccchhHHHHhhcCCeEEEEeCCHHHHH
Q 043853 54 YKLIEDCAGLRDDGSEIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAIS 103 (222)
Q Consensus 54 ~~~i~~~~~~~~~~~~~vlDlg~G~G~~~~~la~~~~~v~gvD~~~~~i~ 103 (222)
+.++...+ + +..+.+|++||+|.+.+.+.. . ++..|+++..+.
T Consensus 15 ~~~i~~~l---P-~~~~yvEpF~GggaV~~~~~~--~-~viNDin~~li~ 57 (259)
T 1yf3_A 15 LPELKSHF---P-KYNRFVDLFCGGLSVSLNVNG--P-VLANDIQEPIIE 57 (259)
T ss_dssp HHHHHHTC---C-CCSEEEETTCTTCTTGGGSCS--S-EEEECSCHHHHH
T ss_pred HHHHHHhC---c-ccCeEEEecCCccHHHHhccc--c-EEEecCChHHHH
Confidence 44455544 2 257999999999999886543 4 888899988764
No 486
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=72.64 E-value=22 Score=28.88 Aligned_cols=100 Identities=20% Similarity=0.118 Sum_probs=53.9
Q ss_pred CCeEEEEe-ccc-chhHH-HHhhcC--CeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEeC--chhchhhhcCCCCCCCc
Q 043853 68 SEIVLDLF-CGT-GTIGL-TLARWV--KHVYGYEVVPQAISDACRNAKLNNIS-NATFVQG--DLNKIGGDFGNAFPKPD 139 (222)
Q Consensus 68 ~~~vlDlg-~G~-G~~~~-~la~~~--~~v~gvD~~~~~i~~a~~n~~~~~~~-~v~~~~~--d~~~~~~~~~~~~~~fD 139 (222)
..+|+=+| +|. |.... .++..+ .++..+|+++. ...+.+ +.....+ ++..+.+ |..+.. ...|
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~-~~~~~d-L~~~~~~~~v~~~~~t~d~~~al-------~gaD 78 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA-PGVTAD-ISHMDTGAVVRGFLGQQQLEAAL-------TGMD 78 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH-HHHHHH-HHTSCSSCEEEEEESHHHHHHHH-------TTCS
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc-HhHHHH-hhcccccceEEEEeCCCCHHHHc-------CCCC
Confidence 46788888 675 55333 444444 48999999876 222222 2211122 2333322 322221 2578
Q ss_pred EEEECCC--C-CC------------ccHHHHHHHHhCCCCcEEEEeeCccch
Q 043853 140 IVISDPN--R-PG------------MHMKLIKFLLKLKAPRIVYVSCNPATC 176 (222)
Q Consensus 140 ~ii~~pp--~-~~------------~~~~~~~~l~~l~~~~~v~~~~~~~~~ 176 (222)
+||...+ + .+ ....+.+.+....+.++++++++|...
T Consensus 79 vVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SNPv~~ 130 (326)
T 1smk_A 79 LIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPVNS 130 (326)
T ss_dssp EEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHH
T ss_pred EEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCchHH
Confidence 8887642 1 11 123344445556788999999998655
No 487
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=72.55 E-value=37 Score=27.57 Aligned_cols=103 Identities=17% Similarity=0.084 Sum_probs=60.7
Q ss_pred CCeEEEEecccchhHH--HHhhcCC-eEEEEeCCHHHHHHHHHHHHH----cCCC-cEEEEeCchhchhhhcCCCCCCCc
Q 043853 68 SEIVLDLFCGTGTIGL--TLARWVK-HVYGYEVVPQAISDACRNAKL----NNIS-NATFVQGDLNKIGGDFGNAFPKPD 139 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~--~la~~~~-~v~gvD~~~~~i~~a~~n~~~----~~~~-~v~~~~~d~~~~~~~~~~~~~~fD 139 (222)
..+|.=+|+|+=+.++ .++..+. .++.+|++++.++.....+.. .+.. +++. ..|..+.. ...|
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t~d~~ea~-------~~aD 80 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-EYSYEAAL-------TGAD 80 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-ECSHHHHH-------TTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-eCCHHHHh-------CCCC
Confidence 4589999987544444 3444444 799999998777663332221 2221 2332 24554222 2578
Q ss_pred EEEECC--C-CCCc-----------------cHHHHHHHHhCCCCcEEEEeeCccchHh
Q 043853 140 IVISDP--N-RPGM-----------------HMKLIKFLLKLKAPRIVYVSCNPATCAR 178 (222)
Q Consensus 140 ~ii~~p--p-~~~~-----------------~~~~~~~l~~l~~~~~v~~~~~~~~~~~ 178 (222)
+|+..- | ..+. ...+.+.+....|..++++.++|....-
T Consensus 81 iVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP~~~~t 139 (331)
T 1pzg_A 81 CVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLDCMV 139 (331)
T ss_dssp EEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHH
T ss_pred EEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCchHHHH
Confidence 888774 4 2233 3455556666678999888898865543
No 488
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=72.38 E-value=38 Score=27.56 Aligned_cols=95 Identities=17% Similarity=0.080 Sum_probs=59.1
Q ss_pred CCeEEEEecccch--hHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHc-------C-CC----------cEEEEeCchhch
Q 043853 68 SEIVLDLFCGTGT--IGLTLARWVKHVYGYEVVPQAISDACRNAKLN-------N-IS----------NATFVQGDLNKI 127 (222)
Q Consensus 68 ~~~vlDlg~G~G~--~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~-------~-~~----------~v~~~~~d~~~~ 127 (222)
..+|-=+|+|+=+ ++..+|..+.+|+-.|.+++.++.+.++++.. + ++ ++.. ..|..+.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~-~~~l~~a 84 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTNLAEA 84 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECCHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhccc-ccchHhH
Confidence 4678899998543 33455667889999999999998887776542 1 10 1221 1232221
Q ss_pred hhhcCCCCCCCcEEEECCC-CCCccHHHHHHHHhCCCCcEEEEe
Q 043853 128 GGDFGNAFPKPDIVISDPN-RPGMHMKLIKFLLKLKAPRIVYVS 170 (222)
Q Consensus 128 ~~~~~~~~~~fD~ii~~pp-~~~~~~~~~~~l~~l~~~~~v~~~ 170 (222)
. ...|+|+=.-| .-.+..++...+....+...++.|
T Consensus 85 ~-------~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaS 121 (319)
T 3ado_A 85 V-------EGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSS 121 (319)
T ss_dssp T-------TTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEE
T ss_pred h-------ccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeeh
Confidence 1 25788877766 446667888888776555545433
No 489
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=72.32 E-value=6.6 Score=30.95 Aligned_cols=75 Identities=21% Similarity=0.169 Sum_probs=50.0
Q ss_pred CCeEEEEecccchhHHH----HhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh------hcCCCCCC
Q 043853 68 SEIVLDLFCGTGTIGLT----LARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG------DFGNAFPK 137 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~----la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~------~~~~~~~~ 137 (222)
++++|=.|+ +|+++.. +++.+.+|+.++.++...+.+.+.+...+. ++.++.+|+.+... ..... ..
T Consensus 33 gk~~lVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~~-g~ 109 (275)
T 4imr_A 33 GRTALVTGS-SRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGG-TAQELAGDLSEAGAGTDLIERAEAI-AP 109 (275)
T ss_dssp TCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTC-CEEEEECCTTSTTHHHHHHHHHHHH-SC
T ss_pred CCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC-eEEEEEecCCCHHHHHHHHHHHHHh-CC
Confidence 567776665 4555544 445577999999998887777777766543 58899999866421 11111 36
Q ss_pred CcEEEECC
Q 043853 138 PDIVISDP 145 (222)
Q Consensus 138 fD~ii~~p 145 (222)
.|+++.+.
T Consensus 110 iD~lvnnA 117 (275)
T 4imr_A 110 VDILVINA 117 (275)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999875
No 490
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=72.30 E-value=17 Score=27.97 Aligned_cols=76 Identities=18% Similarity=0.130 Sum_probs=48.3
Q ss_pred CCeEEEEecccchhHHHHh----hcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh------hcCCCCCC
Q 043853 68 SEIVLDLFCGTGTIGLTLA----RWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG------DFGNAFPK 137 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la----~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~------~~~~~~~~ 137 (222)
++++|=.| |+|+++..++ +.+.+|+.++.++..++.+.+.+...+. ++.++.+|+.+... ......+.
T Consensus 14 ~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 91 (260)
T 2zat_A 14 NKVALVTA-STDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGL-SVTGTVCHVGKAEDRERLVAMAVNLHGG 91 (260)
T ss_dssp TCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 56666555 5566665444 4567999999998877766666655443 47888888765421 00001136
Q ss_pred CcEEEECC
Q 043853 138 PDIVISDP 145 (222)
Q Consensus 138 fD~ii~~p 145 (222)
.|++|.+.
T Consensus 92 iD~lv~~A 99 (260)
T 2zat_A 92 VDILVSNA 99 (260)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999875
No 491
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=72.29 E-value=15 Score=29.19 Aligned_cols=77 Identities=16% Similarity=0.127 Sum_probs=49.8
Q ss_pred CCeEEEEecccchhHHHHh----hcCCeEEEEeCCHHHHHHHHHHHHHcCCC--cEEEEeCchhchhh------hcCCCC
Q 043853 68 SEIVLDLFCGTGTIGLTLA----RWVKHVYGYEVVPQAISDACRNAKLNNIS--NATFVQGDLNKIGG------DFGNAF 135 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la----~~~~~v~gvD~~~~~i~~a~~n~~~~~~~--~v~~~~~d~~~~~~------~~~~~~ 135 (222)
++++|=.| |+|+++..++ +.+.+|+.++.++..++.+.+.+...+.. ++.++.+|+.+... ......
T Consensus 26 ~k~vlVTG-as~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 104 (297)
T 1xhl_A 26 GKSVIITG-SSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF 104 (297)
T ss_dssp TCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 55666555 4566665444 45779999999998887776666554431 58889999865421 100011
Q ss_pred CCCcEEEECC
Q 043853 136 PKPDIVISDP 145 (222)
Q Consensus 136 ~~fD~ii~~p 145 (222)
+.+|++|.+.
T Consensus 105 g~iD~lvnnA 114 (297)
T 1xhl_A 105 GKIDILVNNA 114 (297)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 3689999875
No 492
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=71.97 E-value=6.2 Score=31.84 Aligned_cols=87 Identities=18% Similarity=0.192 Sum_probs=53.1
Q ss_pred CCeEEEEecccchhHHHHhh----cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh--hcCCCCCCCcEE
Q 043853 68 SEIVLDLFCGTGTIGLTLAR----WVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG--DFGNAFPKPDIV 141 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la~----~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~--~~~~~~~~fD~i 141 (222)
+++||=.| |+|.++..+++ .+.+|++++.++.. .+++++.+|+.+... ... ..+|+|
T Consensus 19 ~~~vlVtG-atG~iG~~l~~~L~~~G~~V~~~~r~~~~-------------~~~~~~~~Dl~d~~~~~~~~---~~~d~v 81 (347)
T 4id9_A 19 SHMILVTG-SAGRVGRAVVAALRTQGRTVRGFDLRPSG-------------TGGEEVVGSLEDGQALSDAI---MGVSAV 81 (347)
T ss_dssp --CEEEET-TTSHHHHHHHHHHHHTTCCEEEEESSCCS-------------SCCSEEESCTTCHHHHHHHH---TTCSEE
T ss_pred CCEEEEEC-CCChHHHHHHHHHHhCCCEEEEEeCCCCC-------------CCccEEecCcCCHHHHHHHH---hCCCEE
Confidence 56677665 67777776553 46799999987542 357788899866432 111 268999
Q ss_pred EECCCCCCc---------------cHHHHHHHHhCCCCcEEEEee
Q 043853 142 ISDPNRPGM---------------HMKLIKFLLKLKAPRIVYVSC 171 (222)
Q Consensus 142 i~~pp~~~~---------------~~~~~~~l~~l~~~~~v~~~~ 171 (222)
+........ ...+++.+...+.+.++|+|+
T Consensus 82 ih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS 126 (347)
T 4id9_A 82 LHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASS 126 (347)
T ss_dssp EECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred EECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 876532111 123444454455668899887
No 493
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=71.93 E-value=16 Score=28.46 Aligned_cols=76 Identities=13% Similarity=0.005 Sum_probs=48.8
Q ss_pred CCeEEEEecccchhHH----HHhhcCCeEEEEeC-CHHHHHHHHHHHHHcCCCcEEEEeCchhchhh------hcCCCCC
Q 043853 68 SEIVLDLFCGTGTIGL----TLARWVKHVYGYEV-VPQAISDACRNAKLNNISNATFVQGDLNKIGG------DFGNAFP 136 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~----~la~~~~~v~gvD~-~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~------~~~~~~~ 136 (222)
++++|=.|++ |+++. .+++.+.+|+.++. ++...+...+.++..+. ++.++.+|+.+... ......+
T Consensus 29 ~k~vlITGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g 106 (271)
T 4iin_A 29 GKNVLITGAS-KGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGY-KAAVIKFDAASESDFIEAIQTIVQSDG 106 (271)
T ss_dssp CCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 5677766655 44554 44455779999998 66666777666666554 58899999865421 1111113
Q ss_pred CCcEEEECC
Q 043853 137 KPDIVISDP 145 (222)
Q Consensus 137 ~fD~ii~~p 145 (222)
..|++|.+.
T Consensus 107 ~id~li~nA 115 (271)
T 4iin_A 107 GLSYLVNNA 115 (271)
T ss_dssp SCCEEEECC
T ss_pred CCCEEEECC
Confidence 689999885
No 494
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=71.90 E-value=8 Score=32.77 Aligned_cols=41 Identities=20% Similarity=0.200 Sum_probs=29.8
Q ss_pred CCCeEEEEeccc-chhHHHHhh-cCCeEEEEeCCHHHHHHHHH
Q 043853 67 GSEIVLDLFCGT-GTIGLTLAR-WVKHVYGYEVVPQAISDACR 107 (222)
Q Consensus 67 ~~~~vlDlg~G~-G~~~~~la~-~~~~v~gvD~~~~~i~~a~~ 107 (222)
++.+|+=+|+|. |.....+++ .+.+|+++|.++..++.+++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 467999999984 334444444 46699999999988777765
No 495
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=71.85 E-value=16 Score=29.29 Aligned_cols=76 Identities=14% Similarity=0.186 Sum_probs=48.6
Q ss_pred CCeEEEEecccchhHH----HHhhcCCeEEEEeCC------------HHHHHHHHHHHHHcCCCcEEEEeCchhchhh--
Q 043853 68 SEIVLDLFCGTGTIGL----TLARWVKHVYGYEVV------------PQAISDACRNAKLNNISNATFVQGDLNKIGG-- 129 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~----~la~~~~~v~gvD~~------------~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~-- 129 (222)
++++|=.|++ |+++. .+++.+.+|+.+|.+ +..++.+.+.+...+. ++.++.+|+.+...
T Consensus 46 gk~~lVTGas-~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~ 123 (317)
T 3oec_A 46 GKVAFITGAA-RGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGR-RIIARQADVRDLASLQ 123 (317)
T ss_dssp TCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHH
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHHH
Confidence 5667766655 44444 445567899999986 6667666666665553 58899999865431
Q ss_pred ----hcCCCCCCCcEEEECC
Q 043853 130 ----DFGNAFPKPDIVISDP 145 (222)
Q Consensus 130 ----~~~~~~~~fD~ii~~p 145 (222)
......+..|++|.+.
T Consensus 124 ~~~~~~~~~~g~iD~lVnnA 143 (317)
T 3oec_A 124 AVVDEALAEFGHIDILVSNV 143 (317)
T ss_dssp HHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHcCCCCEEEECC
Confidence 1111113689999885
No 496
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=71.83 E-value=9.3 Score=32.10 Aligned_cols=41 Identities=24% Similarity=0.299 Sum_probs=29.5
Q ss_pred CCCeEEEEeccc-chhHHHHhh-cCCeEEEEeCCHHHHHHHHH
Q 043853 67 GSEIVLDLFCGT-GTIGLTLAR-WVKHVYGYEVVPQAISDACR 107 (222)
Q Consensus 67 ~~~~vlDlg~G~-G~~~~~la~-~~~~v~gvD~~~~~i~~a~~ 107 (222)
++.+|+=+|+|. |......++ .+.+|+++|.++..++.+++
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~ 225 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS 225 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 467899999983 333444443 46799999999987777765
No 497
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=71.82 E-value=19 Score=28.18 Aligned_cols=75 Identities=16% Similarity=-0.018 Sum_probs=47.5
Q ss_pred CCCeEEEEecccch---hHHHHhhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhhh--cCCCCCCCcEE
Q 043853 67 GSEIVLDLFCGTGT---IGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGD--FGNAFPKPDIV 141 (222)
Q Consensus 67 ~~~~vlDlg~G~G~---~~~~la~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~~--~~~~~~~fD~i 141 (222)
+++++|=-|+++|. .+..+++.+.+|+..|.+.. +.+.+.++..+. ++..+..|+.+...- .. .....|++
T Consensus 8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g~-~~~~~~~Dv~d~~~v~~~~-~~g~iDiL 83 (247)
T 4hp8_A 8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDGG-NASALLIDFADPLAAKDSF-TDAGFDIL 83 (247)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTTC-CEEEEECCTTSTTTTTTSS-TTTCCCEE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhCC-cEEEEEccCCCHHHHHHHH-HhCCCCEE
Confidence 46777777766654 33355667889999998743 334444555554 588889998764321 11 22478999
Q ss_pred EECC
Q 043853 142 ISDP 145 (222)
Q Consensus 142 i~~p 145 (222)
+.|.
T Consensus 84 VNNA 87 (247)
T 4hp8_A 84 VNNA 87 (247)
T ss_dssp EECC
T ss_pred EECC
Confidence 9875
No 498
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=71.45 E-value=37 Score=27.12 Aligned_cols=99 Identities=12% Similarity=0.110 Sum_probs=52.6
Q ss_pred eEEEEecccchhHH--HHhhcCC--eEEEEeCCHHHHHHHHHHHHHcC--CCcEEEEeCchhchhhhcCCCCCCCcEEEE
Q 043853 70 IVLDLFCGTGTIGL--TLARWVK--HVYGYEVVPQAISDACRNAKLNN--ISNATFVQGDLNKIGGDFGNAFPKPDIVIS 143 (222)
Q Consensus 70 ~vlDlg~G~G~~~~--~la~~~~--~v~gvD~~~~~i~~a~~n~~~~~--~~~v~~~~~d~~~~~~~~~~~~~~fD~ii~ 143 (222)
+|.=+|+|.=+.++ .++..+. +++.+|++++.++.....+.... ..++++...|...+ ...|+|+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~a~--------~~aDvVIi 73 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGHSEL--------ADAQVVIL 73 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEECGGGG--------TTCSEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECCHHHh--------CCCCEEEE
Confidence 56667876444333 3444444 89999999876653222221110 01233433332211 25799888
Q ss_pred CC--CCC-C------------ccHHHHHHHHhCCCCcEEEEeeCccch
Q 043853 144 DP--NRP-G------------MHMKLIKFLLKLKAPRIVYVSCNPATC 176 (222)
Q Consensus 144 ~p--p~~-~------------~~~~~~~~l~~l~~~~~v~~~~~~~~~ 176 (222)
.. |+. + ....+.+.+....|+.++++.+||...
T Consensus 74 ~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~~~ 121 (304)
T 2v6b_A 74 TAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVDL 121 (304)
T ss_dssp CC------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSHHH
T ss_pred cCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCchHH
Confidence 75 321 1 114455556556788888878887544
No 499
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=71.44 E-value=16 Score=28.59 Aligned_cols=71 Identities=10% Similarity=0.013 Sum_probs=46.6
Q ss_pred CCeEEEEecccchhHHHH----hhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh------hcCCCCCC
Q 043853 68 SEIVLDLFCGTGTIGLTL----ARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG------DFGNAFPK 137 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~l----a~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~------~~~~~~~~ 137 (222)
++++|=.|+ +|+++.++ ++.+.+|+.+|.++..++.+.+.+ + .++.++.+|+.+... .. .....
T Consensus 30 ~k~vlVTGa-s~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~-~~~~~~~~Dl~~~~~v~~~~~~~-~~~~~ 103 (281)
T 3ppi_A 30 GASAIVSGG-AGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL---G-NRAEFVSTNVTSEDSVLAAIEAA-NQLGR 103 (281)
T ss_dssp TEEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C-TTEEEEECCTTCHHHHHHHHHHH-TTSSE
T ss_pred CCEEEEECC-CChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---C-CceEEEEcCCCCHHHHHHHHHHH-HHhCC
Confidence 566776665 45555544 455779999999988777666554 2 258899999866431 12 22246
Q ss_pred CcEEEEC
Q 043853 138 PDIVISD 144 (222)
Q Consensus 138 fD~ii~~ 144 (222)
.|+++.+
T Consensus 104 id~lv~~ 110 (281)
T 3ppi_A 104 LRYAVVA 110 (281)
T ss_dssp EEEEEEC
T ss_pred CCeEEEc
Confidence 7888877
No 500
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=71.32 E-value=23 Score=26.75 Aligned_cols=72 Identities=11% Similarity=0.001 Sum_probs=44.4
Q ss_pred CCeEEEEecccchhHHHHh----hcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEeCchhchhh--hcCCCCCCCcEE
Q 043853 68 SEIVLDLFCGTGTIGLTLA----RWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGG--DFGNAFPKPDIV 141 (222)
Q Consensus 68 ~~~vlDlg~G~G~~~~~la----~~~~~v~gvD~~~~~i~~a~~n~~~~~~~~v~~~~~d~~~~~~--~~~~~~~~fD~i 141 (222)
++++|=.| |+|+++..++ +.+.+|++++.++...+...+. ..+++++.+|+.+... ......+.+|++
T Consensus 7 ~~~vlVTG-asggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~id~v 80 (244)
T 1cyd_A 7 GLRALVTG-AGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE-----CPGIEPVCVDLGDWDATEKALGGIGPVDLL 80 (244)
T ss_dssp TCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-----STTCEEEECCTTCHHHHHHHHTTCCCCSEE
T ss_pred CCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh-----ccCCCcEEecCCCHHHHHHHHHHcCCCCEE
Confidence 56677555 4566665544 4567999999998766544332 1246677888866431 111122468999
Q ss_pred EECC
Q 043853 142 ISDP 145 (222)
Q Consensus 142 i~~p 145 (222)
+.+.
T Consensus 81 i~~A 84 (244)
T 1cyd_A 81 VNNA 84 (244)
T ss_dssp EECC
T ss_pred EECC
Confidence 9875
Done!