BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>043856
MENLLHLYLWFEVVDREDEDWEDEEEDEDEGGEDEDEDGGYEEEEGGEVVDGEDEERRRK
NEKDEQLLEALQPPLNVEKLWIIFYGGNILPKWLTSLTNLRDLKLVFCENCEHLPPLGKL
PLEKLELRDLKSVKRVGNEFLGIEEISEDDPSSSSSSSSVTAFPKLKSLEIKELDLLEEW
NYRITRKENISIMPRLSSLKVGSCNKLKALPDYLLQTTALQELSIYSCENLEELPIPEDR
RTTDIPRLSSLRIGLKVLPDYLLRTTMLQELSISE

High Scoring Gene Products

Symbol, full name Information P value
AT1G58848 protein from Arabidopsis thaliana 3.2e-05
AT1G59218 protein from Arabidopsis thaliana 3.2e-05
ADR1-L2
AT5G04720
protein from Arabidopsis thaliana 0.0010

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  043856
        (275 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:504956182 - symbol:AT1G58848 species:3702 "Ara...   125  3.2e-05   1
TAIR|locus:2826978 - symbol:AT1G59218 species:3702 "Arabi...   125  3.2e-05   1
TAIR|locus:2175433 - symbol:ADR1-L2 "ADR1-like 2" species...   111  0.0010    2


>TAIR|locus:504956182 [details] [associations]
            symbol:AT1G58848 species:3702 "Arabidopsis thaliana"
            [GO:0006952 "defense response" evidence=IEA;ISS] [GO:0043531 "ADP
            binding" evidence=IEA] InterPro:IPR000767 InterPro:IPR002182
            Pfam:PF00931 PRINTS:PR00364 EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0005524 GO:GO:0006952 GO:GO:0043531 EMBL:AB078516
            UniGene:At.22095 UniGene:At.50577 eggNOG:NOG320101 EMBL:AB028201
            EMBL:AB028202 EMBL:AC027036 IPI:IPI00535840 PIR:T52439 PIR:T52440
            RefSeq:NP_001031207.1 RefSeq:NP_001185265.1 RefSeq:NP_176153.1
            RefSeq:NP_683447.2 UniGene:At.70106 ProteinModelPortal:P0DI17
            SMR:P0DI17 GeneID:842226 GeneID:842234 KEGG:ath:AT1G58848
            KEGG:ath:AT1G59218 TAIR:At1g58848 PhylomeDB:P0DI17
            GermOnline:AT1G58848 Uniprot:P0DI17
        Length = 1049

 Score = 125 (49.1 bits), Expect = 3.2e-05, P = 3.2e-05
 Identities = 47/117 (40%), Positives = 63/117 (53%)

Query:   161 TAFPKLKSLEIKELDLLEEWNYRITRKENISIMPRLSSLKVGSCNKLKALPDYLLQTTAL 220
             + FP+L  L++ ELD LEEW   I   E+ S MP+L +L++  C KLK LP+   Q   L
Sbjct:   919 SGFPQLHKLKLSELDGLEEW---IV--EDGS-MPQLHTLEIRRCPKLKKLPNGFPQ---L 969

Query:   221 QELSIYSCENLEELPIPEDRRTTDIPRLSSLRIG----LKVLPDYLLRTTMLQELSI 273
             Q L +   E  EE  I ED     +P L +LRI     LK LPD L     L+ L++
Sbjct:   970 QNLELNELEEWEEW-IVEDG---SMPLLHTLRIWNCPKLKQLPDGLRFIYSLKNLTV 1022

 Score = 115 (45.5 bits), Expect = 0.00055, P = 0.00055
 Identities = 34/89 (38%), Positives = 46/89 (51%)

Query:   163 FPKLKSLEIKELDLLEEWNYRITRKENISIMPRLSSLKVGSCNKLKALPDYLLQTTALQE 222
             FP+L+ L IK L+  E+W      K   S MP L +L +  C KLK LPD  L +  L  
Sbjct:   825 FPQLQKLSIKGLEEWEDW------KVEESSMPVLHTLDIRDCRKLKQLPDEHLPSH-LTS 877

Query:   223 LSIYSCENLEELPIPEDRRTTDIPRLSSL 251
             +S++ C  LEE P+P   R   +  L  L
Sbjct:   878 ISLFFC-CLEEDPMPTLERLVHLKELQLL 905


>TAIR|locus:2826978 [details] [associations]
            symbol:AT1G59218 species:3702 "Arabidopsis thaliana"
            [GO:0006952 "defense response" evidence=IEA;ISS] [GO:0043531 "ADP
            binding" evidence=IEA] InterPro:IPR000767 InterPro:IPR002182
            Pfam:PF00931 PRINTS:PR00364 EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0005524 GO:GO:0006952 GO:GO:0043531 EMBL:AB078516
            UniGene:At.22095 UniGene:At.50577 eggNOG:NOG320101 EMBL:AB028201
            EMBL:AB028202 EMBL:AC027036 IPI:IPI00535840 PIR:T52439 PIR:T52440
            RefSeq:NP_001031207.1 RefSeq:NP_001185265.1 RefSeq:NP_176153.1
            RefSeq:NP_683447.2 UniGene:At.70106 ProteinModelPortal:P0DI17
            SMR:P0DI17 GeneID:842226 GeneID:842234 KEGG:ath:AT1G58848
            KEGG:ath:AT1G59218 TAIR:At1g58848 PhylomeDB:P0DI17
            GermOnline:AT1G58848 Uniprot:P0DI17
        Length = 1049

 Score = 125 (49.1 bits), Expect = 3.2e-05, P = 3.2e-05
 Identities = 47/117 (40%), Positives = 63/117 (53%)

Query:   161 TAFPKLKSLEIKELDLLEEWNYRITRKENISIMPRLSSLKVGSCNKLKALPDYLLQTTAL 220
             + FP+L  L++ ELD LEEW   I   E+ S MP+L +L++  C KLK LP+   Q   L
Sbjct:   919 SGFPQLHKLKLSELDGLEEW---IV--EDGS-MPQLHTLEIRRCPKLKKLPNGFPQ---L 969

Query:   221 QELSIYSCENLEELPIPEDRRTTDIPRLSSLRIG----LKVLPDYLLRTTMLQELSI 273
             Q L +   E  EE  I ED     +P L +LRI     LK LPD L     L+ L++
Sbjct:   970 QNLELNELEEWEEW-IVEDG---SMPLLHTLRIWNCPKLKQLPDGLRFIYSLKNLTV 1022

 Score = 115 (45.5 bits), Expect = 0.00055, P = 0.00055
 Identities = 34/89 (38%), Positives = 46/89 (51%)

Query:   163 FPKLKSLEIKELDLLEEWNYRITRKENISIMPRLSSLKVGSCNKLKALPDYLLQTTALQE 222
             FP+L+ L IK L+  E+W      K   S MP L +L +  C KLK LPD  L +  L  
Sbjct:   825 FPQLQKLSIKGLEEWEDW------KVEESSMPVLHTLDIRDCRKLKQLPDEHLPSH-LTS 877

Query:   223 LSIYSCENLEELPIPEDRRTTDIPRLSSL 251
             +S++ C  LEE P+P   R   +  L  L
Sbjct:   878 ISLFFC-CLEEDPMPTLERLVHLKELQLL 905


>TAIR|locus:2175433 [details] [associations]
            symbol:ADR1-L2 "ADR1-like 2" species:3702 "Arabidopsis
            thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0006952 "defense response" evidence=IEA;ISS] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0043531 "ADP
            binding" evidence=IEA] [GO:0042742 "defense response to bacterium"
            evidence=IGI] [GO:0006499 "N-terminal protein myristoylation"
            evidence=RCA] [GO:0006612 "protein targeting to membrane"
            evidence=RCA] [GO:0009627 "systemic acquired resistance"
            evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
            evidence=RCA] [GO:0009963 "positive regulation of flavonoid
            biosynthetic process" evidence=RCA] [GO:0010363 "regulation of
            plant-type hypersensitive response" evidence=RCA]
            InterPro:IPR000767 InterPro:IPR002182 InterPro:IPR003593
            Pfam:PF00931 PRINTS:PR00364 SMART:SM00382 Pfam:PF05659
            GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0042742
            GO:GO:0043531 HOGENOM:HOG000033825 ProtClustDB:CLSN2686358
            InterPro:IPR008808 PROSITE:PS51153 GO:GO:0017111 EMBL:AL162972
            EMBL:AB008271 EMBL:AY050794 EMBL:AY113952 IPI:IPI00539852
            PIR:T48468 RefSeq:NP_196092.1 UniGene:At.22635 UniGene:At.67919
            ProteinModelPortal:Q9LZ25 SMR:Q9LZ25 STRING:Q9LZ25 PaxDb:Q9LZ25
            PRIDE:Q9LZ25 EnsemblPlants:AT5G04720.1 GeneID:830350
            KEGG:ath:AT5G04720 TAIR:At5g04720 eggNOG:NOG246363
            InParanoid:Q9LZ25 OMA:EPADETH PhylomeDB:Q9LZ25
            Genevestigator:Q9LZ25 GermOnline:AT5G04720 Uniprot:Q9LZ25
        Length = 811

 Score = 111 (44.1 bits), Expect = 0.0010, Sum P(2) = 0.0010
 Identities = 35/117 (29%), Positives = 55/117 (47%)

Query:   163 FPKLKSLEIKELDLLEEWNYRITRKENISIMPRLSSLKVGSCNKLKALPDYLLQTTALQE 222
             FPKL  L I   D L E          I  +  L+S+ + +C ++K LP  L +  ALQ 
Sbjct:   650 FPKLSDLTIDHCDDLLEL------PSTICGITSLNSISITNCPRIKELPKNLSKLKALQL 703

Query:   223 LSIYSCENLEELPIPEDRRTTDIPRLS----SLRIGLKVLPDYLLRTTMLQELSISE 275
             L +Y+C  L  LP+       ++PRL     S  + L  LP+ + +   L+++   E
Sbjct:   704 LRLYACHELNSLPV----EICELPRLKYVDISQCVSLSSLPEKIGKVKTLEKIDTRE 756

 Score = 39 (18.8 bits), Expect = 0.0010, Sum P(2) = 0.0010
 Identities = 7/13 (53%), Positives = 9/13 (69%)

Query:    97 LTNLRDLKLVFCE 109
             L NL  L L+FC+
Sbjct:   622 LQNLHKLSLIFCK 634


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.139   0.409    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      275       199   0.00085  111 3  11 22  0.48    32
                                                     31  0.45    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  602 (64 KB)
  Total size of DFA:  168 KB (2097 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.14u 0.15s 17.29t   Elapsed:  00:00:01
  Total cpu time:  17.14u 0.15s 17.29t   Elapsed:  00:00:01
  Start:  Fri May 10 20:23:03 2013   End:  Fri May 10 20:23:04 2013

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