BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043856
(275 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7XA39|RGA4_SOLBU Putative disease resistance protein RGA4 OS=Solanum bulbocastanum
GN=RGA4 PE=2 SV=1
Length = 988
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 102/219 (46%), Gaps = 53/219 (24%)
Query: 59 RKNEKDEQLLEALQPPLNVEKLWIIFYGGNILPKWL--TSLTNLRDLKLVFCENCEHLPP 116
R K+ ++LEAL+P N++ L II +GG P W+ + L + +++ C+NC LPP
Sbjct: 688 RYESKEVKVLEALKPHPNLKYLEIIAFGGFRFPSWINHSVLEKVISVRIKSCKNCLCLPP 747
Query: 117 LGKLP-LEKLELRDLKSVKRVGNEFLGIEEISEDDPSSSSSSSSVTAFPKLKSLEI---- 171
G+LP LE LEL+ N +E + EDD S S+ +FP LK L I
Sbjct: 748 FGELPCLENLELQ---------NGSAEVEYVEEDDVHSRFSTRR--SFPSLKKLRIWFFR 796
Query: 172 -----------KELDLLEEW-----------------------NYRITRKENISIMPRLS 197
++ +LEE N +IS + L+
Sbjct: 797 SLKGLMKEEGEEKFPMLEEMAILYCPLFVFPTLSSVKKLEVHGNTNTRGLSSISNLSTLT 856
Query: 198 SLKVGSCNKLKALPDYLLQT-TALQELSIYSCENLEELP 235
SL++G+ + +LP+ + + T L+ LS + +NL++LP
Sbjct: 857 SLRIGANYRATSLPEEMFTSLTNLEFLSFFDFKNLKDLP 895
Score = 36.6 bits (83), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 158 SSVTAFPKLKSLEIKELDLLEEWNYRITRKENISIMPRLSSLKVGSCNKLKALPDYLLQT 217
+S+T+ LK L+I+ D LE + ++ + + L+ L V C LK LP+ L
Sbjct: 896 TSLTSLNALKRLQIESCDSLESF-----PEQGLEGLTSLTQLFVKYCKMLKCLPEGLQHL 950
Query: 218 TALQELSIYSCENLEELP---IPED-RRTTDIPRL 248
TAL L + C +E+ I ED + IP L
Sbjct: 951 TALTNLGVSGCPEVEKRCDKEIGEDWHKIAHIPNL 985
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 7/50 (14%)
Query: 203 SCNKLKALPDYLLQTTALQELSIYSCENLEELPIPEDRRTTDIPRLSSLR 252
SCN ++LP+ L + LQ L +++C +L LP ++T+ +LSSLR
Sbjct: 558 SCNNFRSLPERLCKLQNLQTLDVHNCYSLNCLP----KQTS---KLSSLR 600
>sp|Q9LRR4|R13L1_ARATH Putative disease resistance RPP13-like protein 1 OS=Arabidopsis
thaliana GN=RPPL1 PE=3 SV=1
Length = 1054
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 25/193 (12%)
Query: 51 DGEDEERRRKNEKDEQLLEALQPPLNVEKLWIIFYGGNILPKWLT--SLTNLRDLKLVFC 108
E+ + + + ++ E L+P ++EKL I Y G P WL+ S + + ++L C
Sbjct: 741 SSENNTNPHRTQNEAEVFEKLRPHRHIEKLAIERYKGRRFPDWLSDPSFSRIVCIRLREC 800
Query: 109 ENCEHLPPLGKLP-LEKLELRDLKSVKRVGNEFLGIEEISEDDPSSSSSSSSVTAFPKLK 167
+ C LP LG+LP L++L + + ++ +G +F S +
Sbjct: 801 QYCTSLPSLGQLPCLKELHISGMVGLQSIGRKFY-----------FSDQQLRDQDQQPFR 849
Query: 168 SLEIKELDLLEEW----NYRITRKENISIMPRLSSLKVGSCNKLKA-LPDYLLQTTALQE 222
SLE D L +W + R+TR + + P L L + C +L LP +L +L
Sbjct: 850 SLETLRFDNLPDWQEWLDVRVTRGD---LFPSLKKLFILRCPELTGTLPTFL---PSLIS 903
Query: 223 LSIYSCENLEELP 235
L IY C L+ P
Sbjct: 904 LHIYKCGLLDFQP 916
>sp|Q7XA42|RGA1_SOLBU Putative disease resistance protein RGA1 OS=Solanum bulbocastanum
GN=RGA1 PE=2 SV=2
Length = 979
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 110/252 (43%), Gaps = 49/252 (19%)
Query: 60 KNEKDEQLLEALQPPLNVEKLWIIFYGGNILPKWL--TSLTNLRDLKLVFCENCEHLPPL 117
K+ D ++LEAL+P N++ L I +GG LP W+ + L N+ +++ CENC LPP
Sbjct: 686 KHRYDSEVLEALKPHSNLKYLEINGFGGIRLPDWMNQSVLKNVVSIRIRGCENCSCLPPF 745
Query: 118 GKLP-LEKLELR------------------------------DLKSVKRVGNE--FLGIE 144
G+LP LE LEL +LK + ++ E F +E
Sbjct: 746 GELPCLESLELHTGSADVEYVEDNVHPGRFPSLRKLVIWDFSNLKGLLKMEGEKQFPVLE 805
Query: 145 EISED------DPSSSSSSS---SVTAFPKLKSLE----IKELDLLEEWNYRITRKENIS 191
E++ P+ SS + VT L+S+ + LD+ + +E
Sbjct: 806 EMTFYWCPMFVIPTLSSVKTLKVIVTDATVLRSISNLRALTSLDISDNVEATSLPEEMFK 865
Query: 192 IMPRLSSLKVGSCNKLKALPDYLLQTTALQELSIYSCENLEELPIPEDRRTTDIPRLS-S 250
+ L LK+ LK LP L AL+ L C+ LE LP + T + LS S
Sbjct: 866 SLANLKYLKISFFRNLKELPTSLASLNALKSLKFEFCDALESLPEEGVKGLTSLTELSVS 925
Query: 251 LRIGLKVLPDYL 262
+ LK LP+ L
Sbjct: 926 NCMMLKCLPEGL 937
>sp|Q7XA40|RGA3_SOLBU Putative disease resistance protein RGA3 OS=Solanum bulbocastanum
GN=RGA3 PE=2 SV=2
Length = 992
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 49/215 (22%)
Query: 59 RKNEKDEQLLEALQPPLNVEKLWIIFYGGNILPKWL--TSLTNLRDLKLVFCENCEHLPP 116
R ++ ++LEAL+P N++ L II + G LP W+ + L N+ + + CENC LPP
Sbjct: 695 RYESEEVKVLEALKPHPNLKYLEIIDFCGFCLPDWMNHSVLKNVVSILISGCENCSCLPP 754
Query: 117 LGKLP-LEKLELRD--------------------------------LKSVKRV--GNEFL 141
G+LP LE LEL+D LK ++R+ +F
Sbjct: 755 FGELPCLESLELQDGSVEVEYVEDSGFLTRRRFPSLRKLHIGGFCNLKGLQRMKGAEQFP 814
Query: 142 GIEEISEDDPSSSSSSSSVTAFPKLKSLEIKELDLLEEWNYRITRKENISIMPRLSSLKV 201
+EE+ D + FP L S +K+L++ E + +IS + L+SLK+
Sbjct: 815 VLEEMKISD-------CPMFVFPTLSS--VKKLEIWGEAD--AGGLSSISNLSTLTSLKI 863
Query: 202 GSCNKLKALPDYLLQTT-ALQELSIYSCENLEELP 235
S + + +L + + + L LS+ ENL+ELP
Sbjct: 864 FSNHTVTSLLEEMFKNLENLIYLSVSFLENLKELP 898
Score = 32.7 bits (73), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Query: 158 SSVTAFPKLKSLEIKELDLLEEWNYRITRKENISIMPRLSSLKVGSCNKLKALPDYLLQT 217
+S+ + LK L+I+ LE +E + + L+ L V CN LK LP+ L
Sbjct: 899 TSLASLNNLKCLDIRYCYALES-----LPEEGLEGLSSLTELFVEHCNMLKCLPEGLQHL 953
Query: 218 TALQELSIYSCENL---EELPIPED-RRTTDIPRLS 249
T L L I C L E I ED + + IP ++
Sbjct: 954 TTLTSLKIRGCPQLIKRCEKGIGEDWHKISHIPNVN 989
>sp|Q7XBQ9|RGA2_SOLBU Disease resistance protein RGA2 OS=Solanum bulbocastanum GN=RGA2
PE=1 SV=1
Length = 970
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 101/256 (39%), Gaps = 60/256 (23%)
Query: 66 QLLEALQPPLNVEKLWIIFYGGNILPKWL--TSLTNLRDLKLVFCENCEHLPPLGKLP-L 122
++LEAL+P N+ L I + G LP+W+ + L N+ + + NC LPP G LP L
Sbjct: 696 KVLEALKPHSNLTSLKIYGFRGIHLPEWMNHSVLKNIVSILISNFRNCSCLPPFGDLPCL 755
Query: 123 EKLELRDLKSVKRVGNEFLGIEEISEDDPSSSSSSSSVTAFPKLKSLEI----------- 171
E LEL + +E + E D S + FP L+ L+I
Sbjct: 756 ESLELHWGSA---------DVEYVEEVDIDVHSGFPTRIRFPSLRKLDIWDFGSLKGLLK 806
Query: 172 ----KELDLLEEW------------------NYRITRKENISIMP--------RLSSLKV 201
++ +LEE + RI + + P L L +
Sbjct: 807 KEGEEQFPVLEEMIIHECPFLTLSSNLRALTSLRICYNKVATSFPEEMFKNLANLKYLTI 866
Query: 202 GSCNKLKALPDYLLQTTALQELSIYSCENLEELPIPEDRRTTDIPRLSSLRI----GLKV 257
CN LK LP L AL+ L I C LE LP + + L+ L + LK
Sbjct: 867 SRCNNLKELPTSLASLNALKSLKIQLCCALESLP---EEGLEGLSSLTELFVEHCNMLKC 923
Query: 258 LPDYLLRTTMLQELSI 273
LP+ L T L L I
Sbjct: 924 LPEGLQHLTTLTSLKI 939
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 158 SSVTAFPKLKSLEIKELDLLEEWNYRITRKENISIMPRLSSLKVGSCNKLKALPDYLLQT 217
+S+ + LKSL+I+ LE +E + + L+ L V CN LK LP+ L
Sbjct: 877 TSLASLNALKSLKIQLCCALES-----LPEEGLEGLSSLTELFVEHCNMLKCLPEGLQHL 931
Query: 218 TALQELSIYSCENL---EELPIPED-RRTTDIPRLS 249
T L L I C L E I ED + + IP ++
Sbjct: 932 TTLTSLKIRGCPQLIKRCEKGIGEDWHKISHIPNVN 967
>sp|Q9LRR5|DRL21_ARATH Putative disease resistance protein At3g14460 OS=Arabidopsis
thaliana GN=At3g14460 PE=3 SV=1
Length = 1424
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 21/168 (12%)
Query: 65 EQLLEALQPPLNVEKLWIIFYGGNILPKWL--TSLTNLRDLKLVFCENCEHLPPLGKLP- 121
+++L L+P +++ I Y G PKWL +S + + L C C LPP+G+LP
Sbjct: 749 KEVLRMLEPHPHLKTFCIESYQGGAFPKWLGDSSFFGITSVTLSSCNLCISLPPVGQLPS 808
Query: 122 LEKLELRDLKSVKRVGNEFLGIEEISEDDPSSSSSSSSVTAFPKLKSLEIKELDLLEEWN 181
L+ L + +++VG +F E S P +SL+I + + W+
Sbjct: 809 LKYLSIEKFNILQKVGLDFFFGENNSRGVP--------------FQSLQILKFYGMPRWD 854
Query: 182 YRITRKENISIMPRLSSLKVGSCNKL-KALPDYLLQTTALQELSIYSC 228
I + I P L L + C L K P+ L +T E++I C
Sbjct: 855 EWICPELEDGIFPCLQKLIIQRCPSLRKKFPEGLPSST---EVTISDC 899
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 36/206 (17%)
Query: 74 PLNVEKLWIIFYGG-NILPKWLT-SLTNLRDLKLVFCENCEHLPPLGKLP---LEKLELR 128
P N++ L I G LP+ LT S NL +L ++ C + E P G P L+ L +R
Sbjct: 1090 PQNLQSLHIDSCDGLTSLPENLTESYPNLHELLIIACHSLESFP--GSHPPTTLKTLYIR 1147
Query: 129 DLKSVK-----RVGNEFLGIEEISEDDPSSSSSSSSVTAFPKLKSLEIKELDLLEEWNYR 183
D K + + + +E + S+ + ++ FPKL+SL I++ + + ++
Sbjct: 1148 DCKKLNFTESLQPTRSYSQLEYLFIGSSCSNLVNFPLSLFPKLRSLSIRDCESFKTFSIH 1207
Query: 184 I---------------------TRKENISIMPRLSSLKVGSCNKLKALPDYLLQTTALQE 222
T + P+LSS+ + +C KL+ALP+ L T+L
Sbjct: 1208 AGLGDDRIALESLEIRDCPNLETFPQGGLPTPKLSSMLLSNCKKLQALPEKLFGLTSLLS 1267
Query: 223 LSIYSCENLEELP---IPEDRRTTDI 245
L I C +E +P P + RT I
Sbjct: 1268 LFIIKCPEIETIPGGGFPSNLRTLCI 1293
>sp|Q8W4J9|RPP8_ARATH Disease resistance protein RPP8 OS=Arabidopsis thaliana GN=RPP8
PE=1 SV=2
Length = 908
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 60/127 (47%), Gaps = 23/127 (18%)
Query: 99 NLRDLKLVFCENCEHLPPLGKLPLEKLELRDLKSVKRVGNEFLGIEEISEDDPSSSSSSS 158
+L L L++C E P+ LEKL LKSV+ FLG S
Sbjct: 771 HLVHLFLIYCGMEEDPMPI----LEKL--LHLKSVRLARKAFLG-----------SRMVC 813
Query: 159 SVTAFPKLKSLEIKELDLLEEWNYRITRKENISIMPRLSSLKVGSCNKLKALPDYLLQTT 218
S FP+L +EI + LEEW I + + MP L +L + C KLK LPD L T
Sbjct: 814 SKGGFPQLCVIEISKESELEEW---IVEEGS---MPCLRTLTIDDCKKLKELPDGLKYIT 867
Query: 219 ALQELSI 225
+L+EL I
Sbjct: 868 SLKELKI 874
>sp|Q9FJB5|RP8L3_ARATH Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana
GN=RPP8L3 PE=2 SV=1
Length = 901
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 62/127 (48%), Gaps = 23/127 (18%)
Query: 99 NLRDLKLVFCENCEHLPPLGKLPLEKLELRDLKSVKRVGNEFLGIEEISEDDPSSSSSSS 158
++ + L+FC E P+ LEKL LKSV+ F+G +
Sbjct: 762 HIAHIYLLFCHMEEDPMPI----LEKL--LHLKSVELRRKAFIGRRMVC----------- 804
Query: 159 SVTAFPKLKSLEIKELDLLEEWNYRITRKENISIMPRLSSLKVGSCNKLKALPDYLLQTT 218
S FP+L++L+I E LEEW I + + MP L L + SC KL+ LPD L T
Sbjct: 805 SKGGFPQLRALQISEQSELEEW---IVEEGS---MPCLRDLIIHSCEKLEELPDGLKYVT 858
Query: 219 ALQELSI 225
+L+EL I
Sbjct: 859 SLKELKI 865
>sp|P0DI18|DRL45_ARATH Probable disease resistance protein RDL6 OS=Arabidopsis thaliana
GN=RDL6 PE=2 SV=1
Length = 1049
Score = 44.7 bits (104), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 145 EISEDDPSSSSSSSSVTAFPKLKSLEIKELDLLEEWNYRITRKENISIMPRLSSLKVGSC 204
E+ S S FP+L+ L IK L+ E+W K S MP L +L + C
Sbjct: 807 ELRRKSFSGKEMVCSSGGFPQLQKLSIKGLEEWEDW------KVEESSMPVLHTLDIRDC 860
Query: 205 NKLKALPDYLLQTTALQELSIYSCENLEELPIPEDRRTTDIPRLSSL 251
KLK LPD L + L +S++ C LEE P+P R + L L
Sbjct: 861 RKLKQLPDEHL-PSHLTSISLFFC-CLEEDPMPTLERLVHLKELQLL 905
>sp|P0DI17|DRL11_ARATH Probable disease resistance protein RF9 OS=Arabidopsis thaliana
GN=RF9 PE=2 SV=1
Length = 1049
Score = 44.7 bits (104), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 145 EISEDDPSSSSSSSSVTAFPKLKSLEIKELDLLEEWNYRITRKENISIMPRLSSLKVGSC 204
E+ S S FP+L+ L IK L+ E+W K S MP L +L + C
Sbjct: 807 ELRRKSFSGKEMVCSSGGFPQLQKLSIKGLEEWEDW------KVEESSMPVLHTLDIRDC 860
Query: 205 NKLKALPDYLLQTTALQELSIYSCENLEELPIPEDRRTTDIPRLSSL 251
KLK LPD L + L +S++ C LEE P+P R + L L
Sbjct: 861 RKLKQLPDEHL-PSHLTSISLFFC-CLEEDPMPTLERLVHLKELQLL 905
>sp|Q8W3K0|DRL9_ARATH Probable disease resistance protein At1g58602 OS=Arabidopsis
thaliana GN=At1g58602 PE=2 SV=1
Length = 1138
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 73/144 (50%), Gaps = 18/144 (12%)
Query: 112 EHLPP-LGKLPLEKLELRD-LKSVKRVGNEFLGIEEISEDDPSSSSSSSSVTAFPKLKSL 169
EHLP L + L+K L D + +++R+ + ++E+S + + FP+L L
Sbjct: 867 EHLPSHLTAISLKKCGLEDPIPTLERL----VHLKELSLSELCGRIMVCTGGGFPQLHKL 922
Query: 170 EIKELDLLEEWNYRITRKENISIMPRLSSLKVGSCNKLKALPDYLLQTTALQELSIYSCE 229
++ ELD LEEW E+ S MPRL +L++ C KLK LP+ Q LQ L + E
Sbjct: 923 DLSELDGLEEWIV-----EDGS-MPRLHTLEIRRCLKLKKLPNGFPQ---LQNLHLTEVE 973
Query: 230 NLEELPIPEDRRTTDIPRLSSLRI 253
EE I + +P L +L I
Sbjct: 974 EWEEGMIV---KQGSMPLLHTLYI 994
Score = 39.3 bits (90), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 152 SSSSSSSSVTAFPKLKSLEIKELDLLEEWNYRITRKENISIMPRLSSLKVGSCNKLKALP 211
S S FP+L+ L I L E+W K S MP L +L + C KLK LP
Sbjct: 812 SGKKMVCSSCGFPQLQKLSISGLKEWEDW------KVEESSMPLLLTLNIFDCRKLKQLP 865
Query: 212 DYLLQTTALQELSIYSCENLEELPIPEDRRTTDIPRLS 249
D L + L +S+ C LE+ PIP R + LS
Sbjct: 866 DEHL-PSHLTAISLKKC-GLED-PIPTLERLVHLKELS 900
>sp|Q9XIF0|DRL13_ARATH Putative disease resistance protein At1g59780 OS=Arabidopsis
thaliana GN=At1g59780 PE=2 SV=1
Length = 906
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 25/135 (18%)
Query: 98 TNLRDLKLVFCENCEHLPPLGKLPLEKLE-LRDLKSVKRVGNEFLGIEEISEDDPSSSSS 156
++L + LV+C L + P+ LE L LK V N ++G +
Sbjct: 753 SHLTTISLVYCF-------LEEDPMPTLEKLLQLKVVSLWYNAYVGRRMVCTGG------ 799
Query: 157 SSSVTAFPKLKSLEIKELDLLEEWNYRITRKENISIMPRLSSLKVGSCNKLKALPDYLLQ 216
FP L LEI LD LEEW I + + MP L +L + C KLK +PD L
Sbjct: 800 -----GFPPLHRLEIWGLDALEEW---IVEEGS---MPLLHTLHIVDCKKLKEIPDGLRF 848
Query: 217 TTALQELSIYSCENL 231
++L+EL+I + E +
Sbjct: 849 ISSLKELAIRTNEKV 863
>sp|P0DI16|DRL44_ARATH Probable disease resistance protein RDL5 OS=Arabidopsis thaliana
GN=RDL5 PE=1 SV=1
Length = 1017
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 21/137 (15%)
Query: 142 GIEEISEDDPSSSSSSSSVTAFPKLKSLEIKELDLLEEWNYRITRKENISIMPRLSSLKV 201
G E S SS FP+L+ L + +L+ E+W K S MP L +L +
Sbjct: 801 GFESFSGKKMVCSSG-----GFPQLQRLSLLKLEEWEDW------KVEESSMPLLRTLDI 849
Query: 202 GSCNKLKALPDYLLQTTALQELSIYSCENLEELPIPEDRRTTDIPRLSSLRIGLKVLPDY 261
C KLK LPD L + L +S++ C LE+ P+P R + L L++G +
Sbjct: 850 QVCRKLKQLPDEHL-PSHLTSISLFFC-CLEKDPLPTLGR---LVYLKELQLGFRTFSGR 904
Query: 262 LLRTT-----MLQELSI 273
++ + LQ+LSI
Sbjct: 905 IMVCSGGGFPQLQKLSI 921
Score = 38.9 bits (89), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 62/139 (44%), Gaps = 35/139 (25%)
Query: 90 LPKWLTSLTNLRDLKLVFCENC---EHLPPLGKLPLEKLELRDLKSVKRVGNEFLGIEEI 146
LP LTS++ L FC C + LP LG+L + L++L+ LG
Sbjct: 863 LPSHLTSIS------LFFC--CLEKDPLPTLGRL----VYLKELQ---------LGFRTF 901
Query: 147 SEDDPSSSSSSSSVTAFPKLKSLEIKELDLLEEWNYRITRKENISIMPRLSSLKVGSCNK 206
S S FP+L+ L I L+ EEW I + + MP L +L + C K
Sbjct: 902 SGRIMVCSGG-----GFPQLQKLSIYRLEEWEEW---IVEQGS---MPFLHTLYIDDCPK 950
Query: 207 LKALPDYLLQTTALQELSI 225
LK LPD L +L+ L I
Sbjct: 951 LKKLPDGLQFIYSLKNLKI 969
>sp|F4IBE4|DRL10_ARATH Probable disease resistance protein RF45 OS=Arabidopsis thaliana
GN=RF45 PE=1 SV=1
Length = 1017
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 21/137 (15%)
Query: 142 GIEEISEDDPSSSSSSSSVTAFPKLKSLEIKELDLLEEWNYRITRKENISIMPRLSSLKV 201
G E S SS FP+L+ L + +L+ E+W K S MP L +L +
Sbjct: 801 GFESFSGKKMVCSSG-----GFPQLQRLSLLKLEEWEDW------KVEESSMPLLRTLDI 849
Query: 202 GSCNKLKALPDYLLQTTALQELSIYSCENLEELPIPEDRRTTDIPRLSSLRIGLKVLPDY 261
C KLK LPD L + L +S++ C LE+ P+P R + L L++G +
Sbjct: 850 QVCRKLKQLPDEHL-PSHLTSISLFFC-CLEKDPLPTLGR---LVYLKELQLGFRTFSGR 904
Query: 262 LLRTT-----MLQELSI 273
++ + LQ+LSI
Sbjct: 905 IMVCSGGGFPQLQKLSI 921
Score = 38.9 bits (89), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 62/139 (44%), Gaps = 35/139 (25%)
Query: 90 LPKWLTSLTNLRDLKLVFCENC---EHLPPLGKLPLEKLELRDLKSVKRVGNEFLGIEEI 146
LP LTS++ L FC C + LP LG+L + L++L+ LG
Sbjct: 863 LPSHLTSIS------LFFC--CLEKDPLPTLGRL----VYLKELQ---------LGFRTF 901
Query: 147 SEDDPSSSSSSSSVTAFPKLKSLEIKELDLLEEWNYRITRKENISIMPRLSSLKVGSCNK 206
S S FP+L+ L I L+ EEW I + + MP L +L + C K
Sbjct: 902 SGRIMVCSGG-----GFPQLQKLSIYRLEEWEEW---IVEQGS---MPFLHTLYIDDCPK 950
Query: 207 LKALPDYLLQTTALQELSI 225
LK LPD L +L+ L I
Sbjct: 951 LKKLPDGLQFIYSLKNLKI 969
>sp|Q9FKZ0|DRL43_ARATH Probable disease resistance protein At5g66910 OS=Arabidopsis
thaliana GN=At5g66910 PE=2 SV=1
Length = 815
Score = 40.0 bits (92), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 8/82 (9%)
Query: 196 LSSLKVGSCNKLKALPDYLLQTTALQELSIYSCENLEELPIPEDR----RTTDIPRLSSL 251
L +L + +CNKL LP+ + + L+ L + SC NL ELP +R R+ DI
Sbjct: 681 LKTLSITNCNKLSQLPEAIGNLSRLEVLRMCSCMNLSELPEATERLSNLRSLDISHC--- 737
Query: 252 RIGLKVLPDYLLRTTMLQELSI 273
+GL+ LP + + L+ +S+
Sbjct: 738 -LGLRKLPQEIGKLQKLENISM 758
>sp|Q723X5|INLI_LISMF Internalin-I OS=Listeria monocytogenes serotype 4b (strain F2365)
GN=inlI PE=3 SV=1
Length = 1775
Score = 38.1 bits (87), Expect = 0.065, Method: Composition-based stats.
Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 36/222 (16%)
Query: 65 EQLLEALQPPLNVEKLWIIFYGGNILPKWLTSLTNLRDLKLVFCENCEHLPPLGKLP-LE 123
E L L + KL ++ GN K L +L L+L+ NC L LG + L
Sbjct: 282 ENDLTDLTSLAKLPKLKNLYIKGNASLKSLATLKGATKLQLIDASNCTDLETLGDISGLS 341
Query: 124 KLELRDLKSVKRVGNEFLGIEEISE-----DDPSSSSSSSSVTAFPKLKSLEIKELDLLE 178
+LE+ L ++ E ++++ D + ++ PKL++L + +
Sbjct: 342 ELEMIQLSGCSKL-KEITSLKDLPNLVNITADSCAIEDLGTLNNLPKLQTLILSD----- 395
Query: 179 EWNYRITRKENISIMPRLSSLKVGSCNKLKALPDYLLQTTALQELSIYSCENLEELPIPE 238
N +T I+ MP+L +L + C T++ L + LE+L + E
Sbjct: 396 --NKDLTNINAITDMPQLKTLALDGCG-----------ITSIGTLD--NLPKLEKLDLKE 440
Query: 239 DRRTT-----DIPRLSSLRIGLKVLPDYLLRTTMLQELSISE 275
++ T+ D+PRLS L + + +YL L++L + E
Sbjct: 441 NQLTSISEINDLPRLSYLDVSV----NYLTTIGELKKLPLLE 478
Score = 35.4 bits (80), Expect = 0.47, Method: Composition-based stats.
Identities = 52/210 (24%), Positives = 90/210 (42%), Gaps = 31/210 (14%)
Query: 64 DEQLLEALQPPLNVEKLWIIFYGGNILPKWLTSLTNLRDLKLVFCENC--EHLPPLGKLP 121
D +E L N+ KL + N + ++T++ LK + + C + L LP
Sbjct: 372 DSCAIEDLGTLNNLPKLQTLILSDNKDLTNINAITDMPQLKTLALDGCGITSIGTLDNLP 431
Query: 122 -LEKLELRDLKSVKRVGNEFLGIEEISEDDPSSSSSSSSVTAFPKLKSLEIKELDLLEEW 180
LEKL+L++ N+ I EI+ D P S SV + E+K+L LLE
Sbjct: 432 KLEKLDLKE--------NQLTSISEIN-DLPRLSYLDVSVNYLTTIG--ELKKLPLLEWL 480
Query: 181 NYRITRKENISIMPRLSSLK-----------VGSCNKLKALPDYLLQTTALQELS-IYSC 228
N R ++S + SL VG +L +L ++ Q + ++S I+
Sbjct: 481 NVSSNRLSDVSTLTNFPSLNYINVSNNVIRTVGKMTELPSLKEFYAQNNNVSDISMIHDM 540
Query: 229 ENLEELPIPEDRRTT-----DIPRLSSLRI 253
NL ++ + T ++P+L +L +
Sbjct: 541 PNLRKVDASNNLITNIGTFDNLPKLQNLDV 570
>sp|Q8YA32|INLI_LISMO Internalin-I OS=Listeria monocytogenes serovar 1/2a (strain ATCC
BAA-679 / EGD-e) GN=inlI PE=4 SV=1
Length = 1778
Score = 37.7 bits (86), Expect = 0.093, Method: Composition-based stats.
Identities = 51/218 (23%), Positives = 89/218 (40%), Gaps = 24/218 (11%)
Query: 65 EQLLEALQPPLNVEKLWIIFYGGNILPKWLTSLTNLRDLKLVFCENCEHLPPLGKLP-LE 123
E L L + KL ++ GN K L +L L+L+ NC L LG + L
Sbjct: 285 ENDLTNLTSLAKLPKLKNLYIKGNASLKSLETLNGATKLQLIDASNCTDLETLGDISGLS 344
Query: 124 KLELRDLKSVKRVGNEFLGIEEISE-----DDPSSSSSSSSVTAFPKLKSLEIKELDLLE 178
+LE+ L ++ E ++ + D + ++ PKL++L + +
Sbjct: 345 ELEMIQLSGCSKL-KEITSLKNLPNLVNITADSCAIEDLGTLNNLPKLQTLVLSD----- 398
Query: 179 EWNYRITRKENISIMPRLSSLKVGSCNKLKALPDYLLQTTALQELSIYSCENLEELPIPE 238
N +T I+ +P+L +L + C + L L +L+E I
Sbjct: 399 --NENLTNITAITDLPQLKTLTLDGCG--------ITSIGTLDNLPKLEKLDLKENQITS 448
Query: 239 DRRTTDIPRLSSLRIGLKVLPDY--LLRTTMLQELSIS 274
TD+PRLS L + + L L + +L+ L++S
Sbjct: 449 ISEITDLPRLSYLDVSVNNLTTIGDLKKLPLLEWLNVS 486
Score = 35.8 bits (81), Expect = 0.33, Method: Composition-based stats.
Identities = 52/196 (26%), Positives = 90/196 (45%), Gaps = 22/196 (11%)
Query: 68 LEALQPPLNVEKLWIIFYGGNILPKWLTSLTNLRDLKLVFCENC--EHLPPLGKLP-LEK 124
LE L + +L +I G K +TSL NL +L + ++C E L L LP L+
Sbjct: 334 LETLGDISGLSELEMIQLSGCSKLKEITSLKNLPNLVNITADSCAIEDLGTLNNLPKLQT 393
Query: 125 LELRDLKSVKRVG--NEFLGIEEISEDDPSSSSSSSSVTAFPKLKSLEIKELDLLEEWNY 182
L L D +++ + + ++ ++ D +S ++ PKL+ L++KE
Sbjct: 394 LVLSDNENLTNITAITDLPQLKTLTLDG-CGITSIGTLDNLPKLEKLDLKE--------N 444
Query: 183 RITRKENISIMPRLSSLKVGSCNKLKALPDYLLQTTALQELSIYSCENLEELPIPEDRRT 242
+IT I+ +PRLS L V S N L + D L++L + N+ + +
Sbjct: 445 QITSISEITDLPRLSYLDV-SVNNLTTIGD-------LKKLPLLEWLNVSSNRLSDVSTL 496
Query: 243 TDIPRLSSLRIGLKVL 258
T+ P L+ + I V+
Sbjct: 497 TNFPSLNYINISNNVI 512
>sp|Q9FKZ1|DRL42_ARATH Probable disease resistance protein At5g66900 OS=Arabidopsis
thaliana GN=At5g66900 PE=3 SV=1
Length = 809
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 25/171 (14%)
Query: 114 LPPLGKLPLEKLELR-------DLKSVKRVGNEFLGIEEISEDDPSSSSSSSSVTAFPKL 166
LP L ++ LEK+ + L S+K++ E+ D S+ A KL
Sbjct: 596 LPNLKRIRLEKVSITLLDIPQLQLSSLKKLSLVMCSFGEVFYDTEDIVVSN----ALSKL 651
Query: 167 KSLEIKELDLLEEWNYRITRKENISIMPRLSSLKVGSCNKLKALPDYLLQTTALQELSIY 226
+ ++I L+E Y I+ + L +L + +CNKL LP+ + + L+ L +
Sbjct: 652 QEIDIDYCYDLDELPYWISE------IVSLKTLSITNCNKLSQLPEAIGNLSRLEVLRLC 705
Query: 227 SCENLEELPIP----EDRRTTDIPRLSSLRIGLKVLPDYLLRTTMLQELSI 273
S NL ELP + R DI +GL+ LP + + L+++S+
Sbjct: 706 SSMNLSELPEATEGLSNLRFLDISHC----LGLRKLPQEIGKLQNLKKISM 752
>sp|Q15399|TLR1_HUMAN Toll-like receptor 1 OS=Homo sapiens GN=TLR1 PE=1 SV=3
Length = 786
Score = 36.2 bits (82), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 66/129 (51%), Gaps = 12/129 (9%)
Query: 109 ENCEHLPPLGKLPLEKLELRDLKSVKRVGNEFLGIEE--ISEDDPSSSSSSSSVTAFPKL 166
ENC HL L L L+ +L++L + + + +++ IS++ S + L
Sbjct: 366 ENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSL 425
Query: 167 KSLEIKELDLLEEWNYRITRKENISIMPRLSSLKVGSCNKLKALPDYLLQTTALQELSIY 226
SL + ++L + +R + PR+ L + S NK+K++P +++ ALQEL++
Sbjct: 426 LSLNMSS-NILTDTIFR-------CLPPRIKVLDLHS-NKIKSIPKQVVKLEALQELNV- 475
Query: 227 SCENLEELP 235
+ +L +LP
Sbjct: 476 AFNSLTDLP 484
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.135 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,671,811
Number of Sequences: 539616
Number of extensions: 5256529
Number of successful extensions: 92451
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1256
Number of HSP's successfully gapped in prelim test: 786
Number of HSP's that attempted gapping in prelim test: 47207
Number of HSP's gapped (non-prelim): 22921
length of query: 275
length of database: 191,569,459
effective HSP length: 116
effective length of query: 159
effective length of database: 128,974,003
effective search space: 20506866477
effective search space used: 20506866477
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 60 (27.7 bits)