Query 043859
Match_columns 484
No_of_seqs 133 out of 1427
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 15:25:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043859.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043859hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 1.2E-67 4E-72 529.6 35.6 432 5-475 11-453 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 4.7E-64 1.6E-68 511.9 45.3 458 5-476 4-469 (480)
3 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 6.2E-61 2.1E-65 490.5 36.4 444 1-476 1-479 (482)
4 2acv_A Triterpene UDP-glucosyl 100.0 1.6E-60 5.3E-65 484.1 36.0 439 1-475 3-462 (463)
5 2c1x_A UDP-glucose flavonoid 3 100.0 4.8E-60 1.6E-64 479.2 37.3 438 1-476 1-452 (456)
6 4amg_A Snogd; transferase, pol 100.0 4.2E-45 1.4E-49 365.8 23.3 345 5-453 20-383 (400)
7 2iya_A OLEI, oleandomycin glyc 100.0 3.1E-43 1.1E-47 355.1 32.8 379 5-453 10-404 (424)
8 1iir_A Glycosyltransferase GTF 100.0 7.5E-41 2.6E-45 336.5 30.6 364 8-452 1-382 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 4.4E-40 1.5E-44 331.1 27.2 362 8-452 1-383 (416)
10 3rsc_A CALG2; TDP, enediyne, s 100.0 1.8E-38 6.1E-43 319.3 32.1 376 6-473 19-411 (415)
11 3h4t_A Glycosyltransferase GTF 100.0 3.7E-39 1.3E-43 322.8 26.0 358 8-474 1-381 (404)
12 3ia7_A CALG4; glycosysltransfe 100.0 1.3E-37 4.5E-42 311.4 32.4 375 7-473 4-396 (402)
13 2yjn_A ERYCIII, glycosyltransf 100.0 6.4E-38 2.2E-42 317.7 30.0 359 5-453 18-418 (441)
14 2iyf_A OLED, oleandomycin glyc 100.0 3.9E-36 1.3E-40 303.7 33.7 365 1-453 1-382 (430)
15 2p6p_A Glycosyl transferase; X 100.0 1.9E-36 6.6E-41 301.3 27.2 337 8-453 1-362 (384)
16 4fzr_A SSFS6; structural genom 100.0 8.1E-36 2.8E-40 298.2 22.0 345 4-453 12-383 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 1.8E-34 6.2E-39 288.4 29.0 338 5-453 18-380 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 7.3E-34 2.5E-38 283.4 25.3 340 7-453 1-371 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 2.5E-31 8.7E-36 266.7 31.0 362 4-473 17-406 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 3.6E-29 1.2E-33 246.4 28.2 311 8-437 3-326 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 2.2E-26 7.5E-31 201.5 14.1 163 254-453 6-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.9 3.5E-19 1.2E-23 175.2 28.3 342 8-479 7-359 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.6 1.3E-14 4.6E-19 135.6 17.3 117 268-413 156-274 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.6 1.5E-15 5.1E-20 136.3 9.4 132 267-432 26-196 (224)
25 1v4v_A UDP-N-acetylglucosamine 99.4 1.5E-11 5.2E-16 121.0 21.2 79 344-437 255-336 (376)
26 1vgv_A UDP-N-acetylglucosamine 99.4 2.1E-11 7E-16 120.3 19.0 318 8-437 1-344 (384)
27 3ot5_A UDP-N-acetylglucosamine 99.3 4.3E-11 1.5E-15 118.7 20.0 319 5-437 25-363 (403)
28 3dzc_A UDP-N-acetylglucosamine 99.3 8.3E-11 2.8E-15 116.5 20.2 323 5-437 23-369 (396)
29 3okp_A GDP-mannose-dependent a 99.3 9.2E-10 3.2E-14 108.6 26.7 349 5-480 2-382 (394)
30 3c48_A Predicted glycosyltrans 99.3 2.3E-09 8E-14 107.5 27.8 113 344-478 306-426 (438)
31 3fro_A GLGA glycogen synthase; 99.2 1.9E-08 6.6E-13 100.5 32.5 116 344-482 311-435 (439)
32 2gek_A Phosphatidylinositol ma 99.2 5.7E-09 2E-13 103.4 26.8 345 5-479 18-385 (406)
33 3beo_A UDP-N-acetylglucosamine 99.2 1.2E-09 4E-14 107.3 21.1 319 5-437 6-344 (375)
34 2r60_A Glycosyl transferase, g 99.1 1.3E-08 4.6E-13 103.9 24.9 114 344-478 335-460 (499)
35 2jjm_A Glycosyl transferase, g 99.1 5.6E-08 1.9E-12 96.0 28.1 354 7-481 15-389 (394)
36 2iw1_A Lipopolysaccharide core 99.1 5.8E-08 2E-12 94.9 26.6 95 344-450 253-353 (374)
37 2iuy_A Avigt4, glycosyltransfe 99.1 4.4E-09 1.5E-13 101.8 17.9 124 273-434 165-307 (342)
38 2x6q_A Trehalose-synthase TRET 98.9 4.6E-07 1.6E-11 90.0 27.1 112 343-477 292-414 (416)
39 4hwg_A UDP-N-acetylglucosamine 98.9 1.8E-08 6.2E-13 99.0 16.0 314 8-437 9-344 (385)
40 2vsy_A XCC0866; transferase, g 98.5 0.00017 6E-09 74.4 32.4 120 344-479 434-561 (568)
41 3s28_A Sucrose synthase 1; gly 98.4 1.8E-05 6.2E-10 84.4 22.4 81 344-437 640-736 (816)
42 1rzu_A Glycogen synthase 1; gl 98.4 5.1E-05 1.7E-09 76.8 23.3 113 344-479 346-477 (485)
43 3oy2_A Glycosyltransferase B73 98.4 5.5E-05 1.9E-09 74.7 22.8 112 346-479 256-392 (413)
44 2xci_A KDO-transferase, 3-deox 98.3 0.00012 4.1E-09 71.5 23.7 96 345-451 261-362 (374)
45 2qzs_A Glycogen synthase; glyc 98.3 0.0002 7E-09 72.3 25.4 115 344-481 347-480 (485)
46 2hy7_A Glucuronosyltransferase 98.1 0.0016 5.6E-08 64.1 26.2 76 345-437 266-354 (406)
47 2f9f_A First mannosyl transfer 98.1 2.4E-05 8.2E-10 67.6 10.6 89 344-448 78-173 (177)
48 3qhp_A Type 1 capsular polysac 97.5 0.0024 8.2E-08 53.9 13.8 90 345-449 57-155 (166)
49 4gyw_A UDP-N-acetylglucosamine 97.3 0.003 1E-07 67.0 14.6 177 267-477 520-705 (723)
50 3tov_A Glycosyl transferase fa 97.2 0.017 5.8E-07 55.5 17.9 107 5-136 6-115 (349)
51 2bfw_A GLGA glycogen synthase; 97.0 0.015 5E-07 50.6 14.1 79 345-437 96-183 (200)
52 1psw_A ADP-heptose LPS heptosy 96.9 0.056 1.9E-06 51.5 18.1 103 8-136 1-106 (348)
53 3rhz_A GTF3, nucleotide sugar 96.7 0.0032 1.1E-07 60.2 7.9 95 345-453 215-321 (339)
54 3q3e_A HMW1C-like glycosyltran 96.6 0.012 4E-07 60.2 11.6 143 270-437 441-590 (631)
55 2gt1_A Lipopolysaccharide hept 95.7 0.044 1.5E-06 51.9 10.0 42 8-49 1-43 (326)
56 2x0d_A WSAF; GT4 family, trans 92.7 0.1 3.5E-06 51.3 5.0 79 345-437 296-381 (413)
57 2phj_A 5'-nucleotidase SURE; S 90.6 0.92 3.1E-05 40.6 8.4 38 8-48 2-39 (251)
58 3ty2_A 5'-nucleotidase SURE; s 90.4 0.58 2E-05 42.1 6.9 41 5-48 9-49 (261)
59 1g5t_A COB(I)alamin adenosyltr 90.3 3.8 0.00013 35.2 11.8 102 7-121 28-131 (196)
60 3vue_A GBSS-I, granule-bound s 90.2 2.8 9.7E-05 42.4 12.8 119 344-477 382-511 (536)
61 2e6c_A 5'-nucleotidase SURE; S 89.2 1.1 3.9E-05 39.9 7.8 38 8-48 1-38 (244)
62 3vue_A GBSS-I, granule-bound s 89.0 0.26 8.9E-06 50.1 4.0 43 1-46 1-53 (536)
63 2wqk_A 5'-nucleotidase SURE; S 88.6 1.6 5.6E-05 39.2 8.5 109 9-139 3-127 (251)
64 1l5x_A SurviVal protein E; str 88.3 1.5 5.1E-05 40.0 8.1 38 8-48 1-38 (280)
65 1j9j_A Stationary phase surviV 88.0 1.7 5.9E-05 38.9 8.2 38 8-48 1-38 (247)
66 1ccw_A Protein (glutamate muta 88.0 0.85 2.9E-05 36.8 5.7 54 5-59 1-54 (137)
67 3fgn_A Dethiobiotin synthetase 87.0 3.2 0.00011 37.3 9.5 126 5-141 23-167 (251)
68 2v4n_A Multifunctional protein 86.8 1.4 4.7E-05 39.6 6.8 39 7-48 1-39 (254)
69 3dfz_A SIRC, precorrin-2 dehyd 86.3 4.1 0.00014 35.9 9.5 160 259-456 23-187 (223)
70 2bw0_A 10-FTHFDH, 10-formyltet 85.1 5.2 0.00018 37.5 10.2 108 5-141 20-131 (329)
71 2yxb_A Coenzyme B12-dependent 83.7 1.4 4.9E-05 36.6 5.1 54 5-59 16-69 (161)
72 3q0i_A Methionyl-tRNA formyltr 82.6 12 0.00043 34.7 11.6 104 4-141 4-117 (318)
73 2x0d_A WSAF; GT4 family, trans 82.3 0.77 2.6E-05 44.9 3.4 41 5-46 44-89 (413)
74 3vot_A L-amino acid ligase, BL 80.7 9.1 0.00031 37.2 10.6 97 5-134 3-101 (425)
75 4dzz_A Plasmid partitioning pr 79.8 8.8 0.0003 32.6 9.1 40 8-48 1-42 (206)
76 1fmt_A Methionyl-tRNA FMet for 78.9 14 0.00047 34.4 10.5 102 6-141 2-113 (314)
77 3t5t_A Putative glycosyltransf 78.9 8.8 0.0003 38.2 9.7 112 345-478 353-474 (496)
78 2i2x_B MTAC, methyltransferase 78.5 4.5 0.00015 36.5 6.9 54 5-59 121-174 (258)
79 3ezx_A MMCP 1, monomethylamine 78.1 4.1 0.00014 35.6 6.3 55 5-60 90-144 (215)
80 1y80_A Predicted cobalamin bin 77.9 3.7 0.00013 35.7 6.0 52 6-58 87-138 (210)
81 2ywr_A Phosphoribosylglycinami 77.4 25 0.00087 30.5 11.3 108 8-141 2-112 (216)
82 3bgw_A DNAB-like replicative h 76.8 12 0.0004 36.8 9.9 50 7-57 197-246 (444)
83 4a1f_A DNAB helicase, replicat 75.4 5.7 0.00019 37.4 6.9 48 9-57 48-95 (338)
84 3pdi_A Nitrogenase MOFE cofact 75.0 8.6 0.00029 38.2 8.4 94 7-137 332-425 (483)
85 3qxc_A Dethiobiotin synthetase 73.5 5.7 0.00019 35.4 6.1 129 5-141 18-171 (242)
86 2pn1_A Carbamoylphosphate synt 73.1 14 0.0005 34.2 9.3 36 5-46 2-38 (331)
87 3iqw_A Tail-anchored protein t 72.4 20 0.00067 33.6 9.8 42 6-48 14-56 (334)
88 3bh0_A DNAB-like replicative h 72.0 19 0.00065 33.3 9.7 49 7-56 68-116 (315)
89 1mvl_A PPC decarboxylase athal 71.3 4.8 0.00016 34.9 4.9 42 4-48 16-57 (209)
90 3bbn_B Ribosomal protein S2; s 70.8 44 0.0015 29.3 10.9 36 24-60 53-88 (231)
91 3auf_A Glycinamide ribonucleot 70.2 56 0.0019 28.6 12.1 110 7-141 22-133 (229)
92 3u7q_A Nitrogenase molybdenum- 69.8 9.7 0.00033 37.9 7.4 94 7-137 348-441 (492)
93 3zqu_A Probable aromatic acid 69.4 4.5 0.00015 35.2 4.2 41 6-48 3-43 (209)
94 3kcq_A Phosphoribosylglycinami 68.5 26 0.0009 30.4 9.1 109 3-141 4-114 (215)
95 4dim_A Phosphoribosylglycinami 67.9 33 0.0011 32.7 10.8 36 4-45 4-39 (403)
96 1xx6_A Thymidine kinase; NESG, 67.2 25 0.00085 29.9 8.6 45 1-46 1-46 (191)
97 2q6t_A DNAB replication FORK h 66.2 12 0.00041 36.7 7.2 49 7-56 200-249 (444)
98 3nb0_A Glycogen [starch] synth 65.7 20 0.00067 37.2 8.7 44 346-391 495-551 (725)
99 2j9r_A Thymidine kinase; TK1, 65.3 21 0.00073 30.9 7.8 40 6-46 26-66 (214)
100 3io3_A DEHA2D07832P; chaperone 65.0 28 0.00096 32.8 9.2 42 5-47 15-59 (348)
101 3qjg_A Epidermin biosynthesis 63.0 8.9 0.00031 32.2 4.8 50 8-59 6-55 (175)
102 3da8_A Probable 5'-phosphoribo 62.4 33 0.0011 29.8 8.4 111 4-141 9-121 (215)
103 2vqe_B 30S ribosomal protein S 62.3 75 0.0026 28.3 10.8 35 108-142 156-192 (256)
104 2qs7_A Uncharacterized protein 61.0 9.8 0.00033 30.7 4.6 45 1-46 2-46 (144)
105 1xmp_A PURE, phosphoribosylami 60.7 61 0.0021 26.7 9.1 143 269-456 11-163 (170)
106 4ds3_A Phosphoribosylglycinami 60.4 56 0.0019 28.1 9.6 113 4-141 4-118 (209)
107 3lqk_A Dipicolinate synthase s 59.7 10 0.00035 32.6 4.7 42 5-48 5-47 (201)
108 3tqq_A Methionyl-tRNA formyltr 59.4 29 0.00098 32.2 8.0 101 7-141 2-112 (314)
109 1id1_A Putative potassium chan 59.3 8.4 0.00029 31.2 4.0 35 5-45 1-35 (153)
110 2b8t_A Thymidine kinase; deoxy 59.2 21 0.00072 31.2 6.8 38 8-46 12-50 (223)
111 1qgu_B Protein (nitrogenase mo 58.9 1.4E+02 0.0047 29.8 13.5 96 7-137 360-465 (519)
112 1pjq_A CYSG, siroheme synthase 58.7 1E+02 0.0035 30.1 12.4 149 268-456 12-169 (457)
113 1o97_C Electron transferring f 58.7 84 0.0029 28.1 10.8 40 98-139 102-147 (264)
114 2lnd_A De novo designed protei 58.5 13 0.00046 26.0 4.1 50 380-434 49-100 (112)
115 1p3y_1 MRSD protein; flavoprot 58.3 6.7 0.00023 33.6 3.2 51 5-57 6-56 (194)
116 1uqt_A Alpha, alpha-trehalose- 58.0 40 0.0014 33.3 9.4 107 348-477 336-454 (482)
117 3tqr_A Phosphoribosylglycinami 57.7 92 0.0031 26.9 10.5 110 6-141 4-115 (215)
118 2zts_A Putative uncharacterize 56.6 80 0.0027 27.3 10.5 126 8-139 31-180 (251)
119 2bln_A Protein YFBG; transfera 55.5 44 0.0015 30.7 8.6 100 8-141 1-107 (305)
120 2g1u_A Hypothetical protein TM 55.4 12 0.00041 30.4 4.3 40 1-46 13-52 (155)
121 2r6a_A DNAB helicase, replicat 54.5 32 0.0011 33.6 8.0 49 6-55 202-251 (454)
122 3mc3_A DSRE/DSRF-like family p 54.5 17 0.00058 28.8 4.9 40 8-48 16-58 (134)
123 1efp_B ETF, protein (electron 54.0 1.1E+02 0.0038 27.1 10.7 39 99-139 104-148 (252)
124 2r8r_A Sensor protein; KDPD, P 53.9 19 0.00064 31.6 5.4 42 5-47 4-45 (228)
125 3mcu_A Dipicolinate synthase, 53.6 13 0.00046 32.0 4.4 42 5-48 3-45 (207)
126 3tov_A Glycosyl transferase fa 53.5 90 0.0031 29.1 10.7 101 7-140 185-289 (349)
127 3u7q_B Nitrogenase molybdenum- 53.4 1.6E+02 0.0055 29.3 12.9 97 7-138 364-470 (523)
128 3igf_A ALL4481 protein; two-do 52.8 12 0.0004 35.8 4.2 36 8-44 2-38 (374)
129 3qvl_A Putative hydantoin race 52.4 89 0.003 27.6 9.8 38 7-45 1-39 (245)
130 1jkx_A GART;, phosphoribosylgl 51.7 1.2E+02 0.004 26.1 12.8 109 8-141 1-111 (212)
131 1q57_A DNA primase/helicase; d 51.4 80 0.0027 31.2 10.4 48 8-55 243-290 (503)
132 3rfo_A Methionyl-tRNA formyltr 50.7 1.3E+02 0.0044 27.8 10.9 102 6-141 3-114 (317)
133 2iz6_A Molybdenum cofactor car 50.4 29 0.00097 29.1 5.8 45 347-391 92-140 (176)
134 3r8n_B 30S ribosomal protein S 50.4 25 0.00087 30.5 5.6 43 17-60 38-80 (218)
135 3bul_A Methionine synthase; tr 50.3 22 0.00076 36.0 6.0 52 6-58 97-148 (579)
136 3hr8_A Protein RECA; alpha and 50.2 1.1E+02 0.0036 28.9 10.4 41 9-50 63-103 (356)
137 3ug7_A Arsenical pump-driving 49.8 42 0.0014 31.5 7.7 38 8-46 26-64 (349)
138 2dr3_A UPF0273 protein PH0284; 48.8 1.3E+02 0.0044 25.8 10.6 121 7-139 23-171 (247)
139 2vo1_A CTP synthase 1; pyrimid 48.6 18 0.00063 32.4 4.4 43 5-48 20-65 (295)
140 3ih5_A Electron transfer flavo 48.5 51 0.0017 28.6 7.4 111 9-138 5-122 (217)
141 1sbz_A Probable aromatic acid 47.4 19 0.00065 30.8 4.3 42 8-50 1-42 (197)
142 4b4k_A N5-carboxyaminoimidazol 47.2 1.2E+02 0.0042 25.2 10.4 144 269-456 22-174 (181)
143 2hy5_B Intracellular sulfur ox 47.2 18 0.00061 28.9 3.9 44 1-46 1-46 (136)
144 4b4o_A Epimerase family protei 47.2 1.6E+02 0.0053 26.3 11.8 34 8-46 1-34 (298)
145 1qzu_A Hypothetical protein MD 46.9 17 0.00057 31.4 3.9 42 5-48 17-59 (206)
146 2ixd_A LMBE-related protein; h 45.9 1.3E+02 0.0044 26.5 9.8 20 96-117 85-104 (242)
147 4gi5_A Quinone reductase; prot 44.2 31 0.0011 31.3 5.5 38 5-43 20-60 (280)
148 1o4v_A Phosphoribosylaminoimid 43.9 1.4E+02 0.0048 24.9 11.0 141 270-456 14-163 (183)
149 1lss_A TRK system potassium up 43.6 22 0.00074 27.7 4.0 34 6-45 3-36 (140)
150 3o1l_A Formyltetrahydrofolate 43.5 1.9E+02 0.0066 26.3 11.3 109 5-141 103-213 (302)
151 1mio_A Nitrogenase molybdenum 43.1 52 0.0018 33.0 7.5 35 98-137 446-480 (533)
152 2w36_A Endonuclease V; hypoxan 43.0 29 0.001 30.2 4.8 43 97-139 90-139 (225)
153 1xp8_A RECA protein, recombina 42.8 1.1E+02 0.0038 28.8 9.4 42 8-50 75-116 (366)
154 2ejb_A Probable aromatic acid 42.7 31 0.0011 29.2 4.9 40 8-49 2-41 (189)
155 1kjn_A MTH0777; hypotethical p 42.6 18 0.00061 29.2 3.1 40 6-46 5-46 (157)
156 3g0o_A 3-hydroxyisobutyrate de 41.5 15 0.0005 33.8 2.9 39 1-45 1-39 (303)
157 3zzm_A Bifunctional purine bio 41.3 14 0.00049 36.3 2.9 32 5-40 7-38 (523)
158 1mio_B Nitrogenase molybdenum 41.0 1.7E+02 0.0058 28.5 10.8 96 7-138 312-410 (458)
159 3av3_A Phosphoribosylglycinami 40.7 1.7E+02 0.0059 25.0 12.0 109 8-141 4-114 (212)
160 2a33_A Hypothetical protein; s 40.5 57 0.002 28.2 6.4 44 347-390 94-147 (215)
161 1g63_A Epidermin modifying enz 39.9 21 0.00073 30.0 3.4 41 8-50 3-43 (181)
162 2xdq_B Light-independent proto 39.7 2.9E+02 0.0099 27.3 12.5 93 7-138 303-397 (511)
163 2pju_A Propionate catabolism o 38.7 47 0.0016 29.0 5.6 27 365-392 66-92 (225)
164 1u11_A PURE (N5-carboxyaminoim 38.7 1.7E+02 0.0059 24.4 8.8 141 271-456 23-173 (182)
165 3lrx_A Putative hydrogenase; a 38.4 1.5E+02 0.0053 23.7 12.3 38 7-48 23-60 (158)
166 2q5c_A NTRC family transcripti 38.4 33 0.0011 29.2 4.5 28 364-392 53-80 (196)
167 3la6_A Tyrosine-protein kinase 38.2 1E+02 0.0035 27.8 8.1 42 7-49 91-134 (286)
168 1u94_A RECA protein, recombina 38.0 2E+02 0.0067 26.9 10.3 42 8-50 64-105 (356)
169 3s40_A Diacylglycerol kinase; 37.6 77 0.0026 28.9 7.3 26 365-390 66-97 (304)
170 3zq6_A Putative arsenical pump 37.5 82 0.0028 29.0 7.5 40 9-50 15-55 (324)
171 3l6d_A Putative oxidoreductase 37.4 20 0.00069 33.0 3.2 39 1-45 3-41 (306)
172 3goc_A Endonuclease V; alpha-b 37.1 50 0.0017 29.0 5.3 43 97-139 94-143 (237)
173 3lyu_A Putative hydrogenase; t 36.5 1.5E+02 0.0053 23.2 11.1 114 7-135 18-135 (142)
174 3kjh_A CO dehydrogenase/acetyl 36.3 27 0.00093 30.5 3.8 38 8-46 1-38 (254)
175 2x5n_A SPRPN10, 26S proteasome 34.8 1.5E+02 0.005 24.9 8.1 62 10-73 110-173 (192)
176 3tl4_X Glutaminyl-tRNA synthet 34.8 65 0.0022 27.1 5.6 57 402-468 108-171 (187)
177 2l2q_A PTS system, cellobiose- 34.8 56 0.0019 24.6 4.9 40 5-45 2-41 (109)
178 2i2c_A Probable inorganic poly 34.0 18 0.00062 32.7 2.2 26 365-390 38-69 (272)
179 1psw_A ADP-heptose LPS heptosy 34.0 2.7E+02 0.0093 25.3 11.1 103 8-139 181-288 (348)
180 3ea0_A ATPase, para family; al 33.6 91 0.0031 26.9 6.9 42 6-47 2-45 (245)
181 1ehi_A LMDDL2, D-alanine:D-lac 33.5 41 0.0014 31.9 4.8 40 5-45 1-45 (377)
182 3ghy_A Ketopantoate reductase 33.4 26 0.0009 32.6 3.3 34 6-45 2-35 (335)
183 4grd_A N5-CAIR mutase, phospho 33.3 1.8E+02 0.0061 24.0 7.7 145 268-456 11-164 (173)
184 1ydh_A AT5G11950; structural g 33.1 32 0.0011 29.9 3.5 44 346-390 89-143 (216)
185 2gt1_A Lipopolysaccharide hept 32.7 2.5E+02 0.0085 25.4 10.1 99 7-139 178-280 (326)
186 3cmu_A Protein RECA, recombina 32.6 2.9E+02 0.0098 32.7 12.0 107 10-141 735-869 (2050)
187 2r85_A PURP protein PF1517; AT 32.5 38 0.0013 31.1 4.3 33 7-46 2-34 (334)
188 3eag_A UDP-N-acetylmuramate:L- 32.4 45 0.0015 30.9 4.7 35 6-45 3-37 (326)
189 3pdi_B Nitrogenase MOFE cofact 32.0 42 0.0014 32.9 4.6 35 99-138 366-400 (458)
190 1bg6_A N-(1-D-carboxylethyl)-L 32.0 32 0.0011 32.2 3.7 35 5-45 2-36 (359)
191 2hy5_A Putative sulfurtransfer 31.9 75 0.0026 24.7 5.4 27 19-46 15-42 (130)
192 1z7e_A Protein aRNA; rossmann 31.5 77 0.0026 32.6 6.8 100 8-141 1-107 (660)
193 3dfu_A Uncharacterized protein 31.3 30 0.001 30.4 3.1 35 5-45 4-38 (232)
194 1yt5_A Inorganic polyphosphate 31.2 20 0.00069 32.1 2.0 53 360-435 41-96 (258)
195 3s2u_A UDP-N-acetylglucosamine 31.2 89 0.0031 29.2 6.8 27 360-388 92-121 (365)
196 4egb_A DTDP-glucose 4,6-dehydr 31.2 2.2E+02 0.0075 25.9 9.5 34 6-44 23-58 (346)
197 1eiw_A Hypothetical protein MT 31.0 98 0.0034 23.5 5.6 65 358-434 36-109 (111)
198 1meo_A Phosophoribosylglycinam 30.9 2.5E+02 0.0085 23.9 11.8 109 8-141 1-111 (209)
199 3ouz_A Biotin carboxylase; str 30.9 1.6E+02 0.0055 28.3 8.7 36 5-46 4-39 (446)
200 3lou_A Formyltetrahydrofolate 30.9 3E+02 0.01 24.9 12.5 109 5-141 93-203 (292)
201 2fb6_A Conserved hypothetical 30.2 57 0.002 25.0 4.2 39 7-46 7-49 (117)
202 2yvq_A Carbamoyl-phosphate syn 30.2 2E+02 0.007 22.7 8.3 96 11-136 27-130 (143)
203 4hb9_A Similarities with proba 30.2 33 0.0011 32.5 3.5 30 7-42 1-30 (412)
204 3aek_A Light-independent proto 30.2 3.8E+02 0.013 25.8 11.6 92 7-135 307-399 (437)
205 2an1_A Putative kinase; struct 30.1 24 0.00083 32.1 2.4 30 359-390 62-95 (292)
206 3ld9_A DTMP kinase, thymidylat 30.1 2.4E+02 0.0083 24.3 8.8 42 5-47 19-61 (223)
207 3eod_A Protein HNR; response r 30.0 91 0.0031 23.4 5.6 38 1-43 1-38 (130)
208 1qkk_A DCTD, C4-dicarboxylate 29.6 1.3E+02 0.0043 23.5 6.6 50 381-437 74-123 (155)
209 4dll_A 2-hydroxy-3-oxopropiona 29.6 58 0.002 30.0 5.0 35 5-45 29-63 (320)
210 1u0t_A Inorganic polyphosphate 29.6 22 0.00074 32.9 1.9 32 357-390 72-107 (307)
211 3ga2_A Endonuclease V; alpha-b 29.5 63 0.0021 28.5 4.8 42 97-138 96-144 (246)
212 2qv7_A Diacylglycerol kinase D 29.5 81 0.0028 29.3 6.0 26 365-390 83-114 (337)
213 3cmw_A Protein RECA, recombina 29.4 3.4E+02 0.012 31.5 11.8 104 10-138 386-517 (1706)
214 3i83_A 2-dehydropantoate 2-red 29.3 38 0.0013 31.2 3.7 34 7-46 2-35 (320)
215 3h7a_A Short chain dehydrogena 29.0 1.9E+02 0.0065 25.1 8.2 41 1-46 1-41 (252)
216 1p9o_A Phosphopantothenoylcyst 29.0 42 0.0014 31.0 3.8 23 23-46 67-89 (313)
217 1e4e_A Vancomycin/teicoplanin 28.9 39 0.0013 31.4 3.7 40 5-45 1-44 (343)
218 1t35_A Hypothetical protein YV 28.8 1.2E+02 0.0042 25.5 6.4 43 348-390 83-135 (191)
219 3e2i_A Thymidine kinase; Zn-bi 28.7 1.6E+02 0.0056 25.4 7.2 37 9-46 29-66 (219)
220 2xed_A Putative maleate isomer 28.7 1.4E+02 0.0047 26.8 7.2 97 24-136 134-238 (273)
221 1xrs_B D-lysine 5,6-aminomutas 28.7 41 0.0014 30.1 3.5 53 6-58 119-179 (262)
222 3dm5_A SRP54, signal recogniti 28.4 90 0.0031 30.4 6.2 45 7-52 100-144 (443)
223 3gpi_A NAD-dependent epimerase 28.3 31 0.0011 31.0 2.8 36 5-46 1-36 (286)
224 3lp6_A Phosphoribosylaminoimid 28.2 2.1E+02 0.0072 23.7 7.4 144 270-456 8-157 (174)
225 4hn9_A Iron complex transport 28.1 57 0.0019 30.2 4.7 36 102-139 110-145 (335)
226 4g6h_A Rotenone-insensitive NA 27.9 34 0.0012 34.0 3.2 36 5-46 40-75 (502)
227 1hdo_A Biliverdin IX beta redu 27.7 55 0.0019 27.2 4.2 34 7-45 3-36 (206)
228 2zr9_A Protein RECA, recombina 27.3 3E+02 0.01 25.5 9.6 43 7-50 61-103 (349)
229 1pno_A NAD(P) transhydrogenase 27.2 60 0.002 26.7 3.8 36 8-46 24-64 (180)
230 3llv_A Exopolyphosphatase-rela 27.1 42 0.0014 26.3 3.1 33 7-45 6-38 (141)
231 3kuu_A Phosphoribosylaminoimid 27.1 2.7E+02 0.0091 23.0 8.0 143 271-456 14-164 (174)
232 3lp8_A Phosphoribosylamine-gly 27.0 3.8E+02 0.013 25.7 10.6 36 5-45 19-54 (442)
233 1efv_B Electron transfer flavo 26.9 1E+02 0.0034 27.5 5.8 40 98-139 106-151 (255)
234 3sbx_A Putative uncharacterize 26.7 2.1E+02 0.0072 24.0 7.5 93 269-388 43-144 (189)
235 1d4o_A NADP(H) transhydrogenas 26.6 62 0.0021 26.7 3.8 36 8-46 23-63 (184)
236 3fwz_A Inner membrane protein 26.4 55 0.0019 25.7 3.7 34 7-46 7-40 (140)
237 4edh_A DTMP kinase, thymidylat 26.2 3E+02 0.01 23.3 10.1 41 4-45 3-43 (213)
238 2zkq_b 40S ribosomal protein S 26.2 1.8E+02 0.0062 26.4 7.3 33 110-142 118-152 (295)
239 3qrx_B Melittin; calcium-bindi 26.0 17 0.00058 19.1 0.3 17 371-387 1-17 (26)
240 2ew2_A 2-dehydropantoate 2-red 25.6 47 0.0016 30.2 3.5 33 7-45 3-35 (316)
241 2etv_A Iron(III) ABC transport 25.6 63 0.0022 30.1 4.5 33 104-138 92-125 (346)
242 2i87_A D-alanine-D-alanine lig 25.5 40 0.0014 31.7 3.1 40 5-45 1-44 (364)
243 3n7t_A Macrophage binding prot 25.3 1.2E+02 0.0041 26.7 6.0 37 8-45 10-57 (247)
244 3ors_A N5-carboxyaminoimidazol 25.3 2.8E+02 0.0095 22.6 8.2 143 271-456 5-155 (163)
245 3mjf_A Phosphoribosylamine--gl 25.2 2.2E+02 0.0076 27.3 8.5 32 7-44 3-35 (431)
246 3vps_A TUNA, NAD-dependent epi 25.2 36 0.0012 31.0 2.7 41 1-46 1-41 (321)
247 3hn2_A 2-dehydropantoate 2-red 24.9 59 0.002 29.8 4.1 33 8-46 3-35 (312)
248 1tvm_A PTS system, galactitol- 24.9 1.3E+02 0.0044 22.8 5.4 40 5-45 19-59 (113)
249 2q5c_A NTRC family transcripti 24.5 53 0.0018 27.9 3.4 40 99-141 130-170 (196)
250 2fsv_C NAD(P) transhydrogenase 24.5 69 0.0024 26.9 3.8 36 8-46 47-87 (203)
251 1ks9_A KPA reductase;, 2-dehyd 24.2 57 0.002 29.2 3.8 33 8-46 1-33 (291)
252 3p32_A Probable GTPase RV1496/ 24.0 4.3E+02 0.015 24.4 10.5 42 6-48 78-119 (355)
253 1djl_A Transhydrogenase DIII; 23.9 72 0.0025 26.9 3.8 36 8-46 46-86 (207)
254 2bru_C NAD(P) transhydrogenase 23.7 68 0.0023 26.4 3.5 36 8-46 31-71 (186)
255 1hjr_A Holliday junction resol 23.6 92 0.0031 25.4 4.5 48 91-140 42-104 (158)
256 2qh9_A UPF0215 protein AF_1433 23.6 90 0.0031 26.2 4.6 40 99-138 51-98 (184)
257 1q1v_A DEK protein; winged-hel 23.5 1.6E+02 0.0054 20.2 5.0 54 418-473 10-64 (70)
258 3l4b_C TRKA K+ channel protien 23.3 35 0.0012 29.3 2.1 33 8-46 1-33 (218)
259 1o97_D Electron transferring f 23.3 3.3E+02 0.011 25.0 8.8 96 23-139 20-119 (320)
260 2c5m_A CTP synthase; cytidine 23.2 73 0.0025 28.4 3.9 42 6-48 21-65 (294)
261 2q62_A ARSH; alpha/beta, flavo 23.2 1E+02 0.0035 27.2 5.1 41 4-45 31-74 (247)
262 3l7i_A Teichoic acid biosynthe 23.0 1.2E+02 0.0041 31.6 6.5 118 346-475 601-719 (729)
263 3md9_A Hemin-binding periplasm 22.9 76 0.0026 27.8 4.3 34 103-138 54-89 (255)
264 3h75_A Periplasmic sugar-bindi 22.8 3.4E+02 0.012 24.6 9.1 39 99-139 52-94 (350)
265 3nbm_A PTS system, lactose-spe 22.7 91 0.0031 23.5 4.0 39 4-43 3-41 (108)
266 1z82_A Glycerol-3-phosphate de 22.7 59 0.002 30.1 3.6 33 7-45 14-46 (335)
267 2dgd_A 223AA long hypothetical 22.6 2.3E+02 0.0078 24.2 7.3 97 24-136 96-201 (223)
268 1ihu_A Arsenical pump-driving 22.6 73 0.0025 32.3 4.6 45 1-46 1-46 (589)
269 2q8p_A Iron-regulated surface 22.6 79 0.0027 27.8 4.4 34 104-139 56-90 (260)
270 3h2s_A Putative NADH-flavin re 22.5 66 0.0023 27.3 3.7 33 8-45 1-33 (224)
271 3k96_A Glycerol-3-phosphate de 22.5 61 0.0021 30.5 3.7 35 5-45 27-61 (356)
272 1y1p_A ARII, aldehyde reductas 22.4 82 0.0028 28.8 4.6 38 3-45 7-44 (342)
273 2vrn_A Protease I, DR1199; cys 22.4 1.8E+02 0.006 24.0 6.4 40 5-46 7-46 (190)
274 2bon_A Lipid kinase; DAG kinas 22.4 1.6E+02 0.0053 27.2 6.5 81 268-390 30-118 (332)
275 4g65_A TRK system potassium up 22.2 27 0.00092 34.3 1.2 35 6-46 2-36 (461)
276 1gsa_A Glutathione synthetase; 22.1 73 0.0025 28.8 4.2 37 8-45 2-41 (316)
277 3hwr_A 2-dehydropantoate 2-red 22.1 60 0.0021 29.8 3.5 32 5-42 17-48 (318)
278 3m6m_D Sensory/regulatory prot 22.1 1.1E+02 0.0036 23.7 4.7 35 104-140 54-99 (143)
279 2qk4_A Trifunctional purine bi 22.0 2.6E+02 0.0089 26.9 8.4 34 7-45 24-57 (452)
280 3ot1_A 4-methyl-5(B-hydroxyeth 21.9 1.5E+02 0.0051 25.1 5.8 42 1-45 4-45 (208)
281 3qha_A Putative oxidoreductase 21.9 57 0.002 29.6 3.3 34 7-46 15-48 (296)
282 3of5_A Dethiobiotin synthetase 21.8 90 0.0031 27.1 4.4 125 7-140 3-149 (228)
283 3qua_A Putative uncharacterize 21.8 2.4E+02 0.0081 23.9 6.9 43 347-390 102-155 (199)
284 1rcu_A Conserved hypothetical 21.4 51 0.0017 28.1 2.6 40 351-390 107-150 (195)
285 2gk4_A Conserved hypothetical 21.3 64 0.0022 28.3 3.3 26 18-46 28-53 (232)
286 2rjn_A Response regulator rece 21.3 1.5E+02 0.0051 23.0 5.5 39 1-44 1-39 (154)
287 4eg0_A D-alanine--D-alanine li 21.2 1.2E+02 0.0041 27.6 5.5 39 7-46 13-55 (317)
288 3ew7_A LMO0794 protein; Q8Y8U8 21.1 74 0.0025 26.8 3.7 34 8-46 1-34 (221)
289 3ic5_A Putative saccharopine d 21.0 79 0.0027 23.3 3.5 33 7-45 5-38 (118)
290 1iow_A DD-ligase, DDLB, D-ALA\ 21.0 1.1E+02 0.0037 27.5 5.0 39 7-46 2-44 (306)
291 2raf_A Putative dinucleotide-b 20.9 79 0.0027 26.9 3.8 34 6-45 18-51 (209)
292 1e2b_A Enzyme IIB-cellobiose; 20.9 1.9E+02 0.0064 21.5 5.5 41 5-46 1-41 (106)
293 3c24_A Putative oxidoreductase 20.8 85 0.0029 28.1 4.2 31 8-44 12-43 (286)
294 3alj_A 2-methyl-3-hydroxypyrid 20.8 68 0.0023 30.1 3.7 35 5-45 9-43 (379)
295 3lzw_A Ferredoxin--NADP reduct 20.6 28 0.00097 31.8 0.9 40 1-46 1-40 (332)
296 4ep4_A Crossover junction endo 20.4 1.9E+02 0.0063 23.8 5.7 49 90-140 45-108 (166)
297 2hmt_A YUAA protein; RCK, KTN, 20.3 65 0.0022 24.9 3.0 32 8-45 7-38 (144)
298 2r7a_A Bacterial heme binding 20.2 93 0.0032 27.2 4.3 34 103-138 54-89 (256)
299 2orv_A Thymidine kinase; TP4A 20.2 4.3E+02 0.015 23.0 9.2 37 9-46 20-57 (234)
300 2d1p_A TUSD, hypothetical UPF0 20.1 1.4E+02 0.0049 23.6 4.9 40 6-46 11-54 (140)
301 4e5v_A Putative THUA-like prot 20.0 1.1E+02 0.0039 27.5 4.8 39 5-45 2-43 (281)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=1.2e-67 Score=529.61 Aligned_cols=432 Identities=26% Similarity=0.393 Sum_probs=343.5
Q ss_pred CCCCeEEEEcCCCccChHHHHHHHHHHHhcCC--CeEEEEecCCCchhHHHHHhhhc-cCCCceEEEecCCCCCCCCCCC
Q 043859 5 SSKPHAVLLASPGVGHVIPVLELGKRLVTLYN--FQVTIFVVASQTSAAESKILQSA-MSSKLCHVIEIPAPDISGLVDP 81 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P~l~La~~L~~r~G--h~Vt~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~ 81 (484)
.+++||+++|+|++||++|++.||+.|+++ | +.|||++++.+..+ +.... ....+++|.++|..-.++. ..
T Consensus 11 ~~~~hvv~~P~p~~GHi~P~l~Lak~L~~~-g~~~~vT~~~t~~~~~~----~~~~~~~~~~~i~~~~ipdglp~~~-~~ 84 (454)
T 3hbf_A 11 NNLLHVAVLAFPFGTHAAPLLSLVKKIATE-APKVTFSFFCTTTTNDT----LFSRSNEFLPNIKYYNVHDGLPKGY-VS 84 (454)
T ss_dssp -CCCEEEEECCCSSSSHHHHHHHHHHHHHH-CTTSEEEEEECHHHHHH----SCSSSSCCCTTEEEEECCCCCCTTC-CC
T ss_pred CCCCEEEEEcCCcccHHHHHHHHHHHHHhC-CCCEEEEEEeCHHHHHh----hhcccccCCCCceEEecCCCCCCCc-cc
Confidence 346899999999999999999999999999 8 99999998743322 21111 0124699999984321111 11
Q ss_pred CchHHHHHHHHHHHhhHHHHHHHHhc----CCCCeEEEeCCchhhHHHHHHHhCCCeEEEecccHHHHHHHHhhcccccc
Q 043859 82 DAAVVTIISVIMREIKPAFRSAISAL----KTTPTALIVDLFGTESLAIAEELQIPKYVYVGTNAWCVALFVYAPTLDKT 157 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~l~~~----~~~pD~VI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~ 157 (484)
..+....+..+.+.+.+.+++.++++ ..++||||+|.+.+|+..+|+++|||++.+++++++.+..+.+.+.....
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~ 164 (454)
T 3hbf_A 85 SGNPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREK 164 (454)
T ss_dssp CSCTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHT
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhh
Confidence 11122223334444444555555543 45899999999999999999999999999999999999888877655443
Q ss_pred ccCccccCCccc-cCCCCCCCCcCCCCCccc-cCCchhHHHHHHhhhcccCccEEEEcChhhhcHHHHHHHhhccccCCC
Q 043859 158 VQGQYVVQNESF-NIPGCRPLRPEDVVDPML-DRTNQQYFEYVHIGEEIPLSDGILVNTWEDLQPTALTALRDDKSLGRI 235 (484)
Q Consensus 158 ~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~rp 235 (484)
...........+ .+||++.++..+++..+. ......++.+.+..+....++.+++||+.+||++++.++++.
T Consensus 165 ~~~~~~~~~~~~~~iPg~p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~------ 238 (454)
T 3hbf_A 165 TGSKEVHDVKSIDVLPGFPELKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSK------ 238 (454)
T ss_dssp CCHHHHTTSSCBCCSTTSCCBCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTT------
T ss_pred cCCCccccccccccCCCCCCcChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhc------
Confidence 211011112233 389999999999988765 334456677777778888899999999999999988888765
Q ss_pred CCCCeEEeccccCCCCC--CCCccccccccCCCCCCeEEEEecCCCCCCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCCC
Q 043859 236 TKVPIYTVGPIIRRLGP--AGSWNELFDWLDKQPSESVLYVSFGSGGTLTYEQITELAWGLELSQQRFIWVVRLPNETTG 313 (484)
Q Consensus 236 ~~p~~~~vGpl~~~~~~--~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~ 313 (484)
+|++++|||++..... ...+.++.+||+.++++++|||||||+...+.+++.+++.+|+.++++|||+++..
T Consensus 239 -~~~v~~vGPl~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~----- 312 (454)
T 3hbf_A 239 -FKLLLNVGPFNLTTPQRKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGD----- 312 (454)
T ss_dssp -SSCEEECCCHHHHSCCSCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSC-----
T ss_pred -CCCEEEECCcccccccccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCc-----
Confidence 6789999999864221 12356899999998889999999999998888999999999999999999998432
Q ss_pred CCCcccCCCCCCCCCccCCCchhHHHhhcCCceEecCCcchhhhccCCCccccccccCchhHHHHHhcCCceeecccccc
Q 043859 314 DGSFFTAGSGAGDDDLSSLLPDGFLSRTLDIGVVVPQWAPQIDILSHPSVGGFLSHCGWNSTLESITNGVPMIVWPLYSE 393 (484)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~ipq~~vL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~P~~~D 393 (484)
....+|++|.++.+. |+.+.+|+||.++|+|+++++||||||+||++|++++|||||++|+++|
T Consensus 313 ---------------~~~~lp~~~~~~~~~-~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~D 376 (454)
T 3hbf_A 313 ---------------PKEKLPKGFLERTKT-KGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGD 376 (454)
T ss_dssp ---------------HHHHSCTTHHHHTTT-TEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTT
T ss_pred ---------------chhcCCHhHHhhcCC-ceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCccccc
Confidence 224578888877764 5666699999999999999999999999999999999999999999999
Q ss_pred cchhHHHHHhhhcceEEeeecCCCCccCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHH
Q 043859 394 QRMNATILTEELGVAIRSKVLPSKGVVGREEIKTMVRRILVDEEGYEIRAKVKELQRSAQKAWTRESGSSYSSLARLAKE 473 (484)
Q Consensus 394 Q~~na~rv~~~~G~g~~l~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~~~g~~~~~~~~~~~~ 473 (484)
|+.||+++++.+|+|+.++. ..+++++|+++|+++|.|++++.||+||+++++.+++|+ .+|||++.++++|+++
T Consensus 377 Q~~Na~~v~~~~g~Gv~l~~----~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~-~~gGsS~~~l~~~v~~ 451 (454)
T 3hbf_A 377 QGLNTILTESVLEIGVGVDN----GVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAV-EQNGTSAMDFTTLIQI 451 (454)
T ss_dssp HHHHHHHHHTTSCSEEECGG----GSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHT-STTSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCeeEEecC----CCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhh-ccCCCHHHHHHHHHHH
Confidence 99999999533799999873 578999999999999998767779999999999999999 9999999999999998
Q ss_pred Hh
Q 043859 474 CG 475 (484)
Q Consensus 474 ~~ 475 (484)
+.
T Consensus 452 i~ 453 (454)
T 3hbf_A 452 VT 453 (454)
T ss_dssp HT
T ss_pred Hh
Confidence 74
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=4.7e-64 Score=511.87 Aligned_cols=458 Identities=40% Similarity=0.742 Sum_probs=343.8
Q ss_pred CCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCC--CchhHHHHHhhhccCCCceEEEecCCCCCCCCCCCC
Q 043859 5 SSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVAS--QTSAAESKILQSAMSSKLCHVIEIPAPDISGLVDPD 82 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 82 (484)
.+++||+++|+|++||++|+++||++|++|.||+|||++++. +...+.+. .... ..+++|+.+|....++. ...
T Consensus 4 ~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~-~~~~--~~~i~~~~l~~~~~~~~-~~~ 79 (480)
T 2vch_A 4 SKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTV-LDSL--PSSISSVFLPPVDLTDL-SSS 79 (480)
T ss_dssp --CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHH-HC-C--CTTEEEEECCCCCCTTS-CTT
T ss_pred CCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhh-cccc--CCCceEEEcCCCCCCCC-CCc
Confidence 456899999999999999999999999974179999999987 34433221 1110 13599999986432222 111
Q ss_pred chHHHHHHHHHHHhhHHHHHHHHhc--CCCC-eEEEeCCchhhHHHHHHHhCCCeEEEecccHHHHHHHHhhcccccccc
Q 043859 83 AAVVTIISVIMREIKPAFRSAISAL--KTTP-TALIVDLFGTESLAIAEELQIPKYVYVGTNAWCVALFVYAPTLDKTVQ 159 (484)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~l~~~--~~~p-D~VI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~ 159 (484)
......+........+.++++++++ ..++ ||||+|.+..|+..+|+++|||++.+++++++....+.++|.......
T Consensus 80 ~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 159 (480)
T 2vch_A 80 TRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVS 159 (480)
T ss_dssp CCHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCC
T ss_pred hhHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcCC
Confidence 2233334445555667788888775 3477 999999999999999999999999999999887777766664433222
Q ss_pred CccccCCccccCCCCCCCCcCCCCCccccCCchhHHHHHHhhhcccCccEEEEcChhhhcHHHHHHHhhccccCCCCCCC
Q 043859 160 GQYVVQNESFNIPGCRPLRPEDVVDPMLDRTNQQYFEYVHIGEEIPLSDGILVNTWEDLQPTALTALRDDKSLGRITKVP 239 (484)
Q Consensus 160 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~rp~~p~ 239 (484)
..+........+|+++++...+++..+..+....+..+......+++..++++|++.+|+...+..+.+. +|.+|+
T Consensus 160 ~~~~~~~~~~~~Pg~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~----~~~~~~ 235 (480)
T 2vch_A 160 CEFRELTEPLMLPGCVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEP----GLDKPP 235 (480)
T ss_dssp SCGGGCSSCBCCTTCCCBCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSC----CTTCCC
T ss_pred CcccccCCcccCCCCCCCChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhc----ccCCCc
Confidence 2211112234567777777777766554443345555556666677788999999999999988888762 332678
Q ss_pred eEEeccccCCCCC---CCCccccccccCCCCCCeEEEEecCCCCCCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCCCCCC
Q 043859 240 IYTVGPIIRRLGP---AGSWNELFDWLDKQPSESVLYVSFGSGGTLTYEQITELAWGLELSQQRFIWVVRLPNETTGDGS 316 (484)
Q Consensus 240 ~~~vGpl~~~~~~---~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~ 316 (484)
+++|||++....+ ...+.++.+||+.++++++|||||||+...+.+++.+++.+|+.++++|||+++..... +...
T Consensus 236 v~~vGpl~~~~~~~~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~-~~~~ 314 (480)
T 2vch_A 236 VYPVGPLVNIGKQEAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGI-ANSS 314 (480)
T ss_dssp EEECCCCCCCSCSCC-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSS-TTTT
T ss_pred EEEEeccccccccccCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCcccc-cccc
Confidence 9999999865322 22457899999998788999999999988888999999999999999999999654210 0000
Q ss_pred cccCCCCCCCCCccCCCchhHHHhhcCCceEecCCcchhhhccCCCccccccccCchhHHHHHhcCCceeecccccccch
Q 043859 317 FFTAGSGAGDDDLSSLLPDGFLSRTLDIGVVVPQWAPQIDILSHPSVGGFLSHCGWNSTLESITNGVPMIVWPLYSEQRM 396 (484)
Q Consensus 317 ~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~ipq~~vL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~P~~~DQ~~ 396 (484)
+++.+. ..+....+|+++.++++..++++.+|+||.+||+|+++++||||||+||++||+++|||||++|+++||+.
T Consensus 315 ~~~~~~---~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ~~ 391 (480)
T 2vch_A 315 YFDSHS---QTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKM 391 (480)
T ss_dssp TTCC-----CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHH
T ss_pred cccccc---ccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccchH
Confidence 000000 01112368899998888888888779999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhhhcceEEeeecCCCCccCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHhh
Q 043859 397 NATILTEELGVAIRSKVLPSKGVVGREEIKTMVRRILVDEEGYEIRAKVKELQRSAQKAWTRESGSSYSSLARLAKECGM 476 (484)
Q Consensus 397 na~rv~~~~G~g~~l~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~~~g~~~~~~~~~~~~~~~ 476 (484)
||+++++++|+|+.++. .++..+++++|+++|+++|.+++++.||+||+++++.+++|+ .++|++..++++|++++..
T Consensus 392 na~~l~~~~G~g~~l~~-~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~-~~gGss~~~~~~~v~~~~~ 469 (480)
T 2vch_A 392 NAVLLSEDIRAALRPRA-GDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVL-KDDGTSTKALSLVALKWKA 469 (480)
T ss_dssp HHHHHHHTTCCEECCCC-CTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHT-STTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCeEEEeec-ccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHH-hcCCCHHHHHHHHHHHHHH
Confidence 99997569999999863 111268999999999999986555569999999999999999 9999999999999998875
No 3
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=6.2e-61 Score=490.47 Aligned_cols=444 Identities=26% Similarity=0.483 Sum_probs=322.6
Q ss_pred CCCC-CCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhhccC-CCceEEEecCCCCCCCC
Q 043859 1 MESS-SSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSAMS-SKLCHVIEIPAPDISGL 78 (484)
Q Consensus 1 m~~~-~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~ 78 (484)
|+.. ++++||+++|+|++||++|++.||++|++| ||+|||++++.+...+.+..-..... ..+++|..+|.. .+..
T Consensus 1 ~~~~~~~~~~vl~~p~p~~GHi~P~l~La~~L~~r-G~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~-lp~~ 78 (482)
T 2pq6_A 1 MGNFANRKPHVVMIPYPVQGHINPLFKLAKLLHLR-GFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDG-LTPM 78 (482)
T ss_dssp -------CCEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEEEHHHHHHHC------------CEEEEEECCC-CC--
T ss_pred CCcccCCCCEEEEecCccchhHHHHHHHHHHHHhC-CCeEEEEeCCchhhhhccccccccccCCCceEEEECCCC-CCCc
Confidence 5554 456899999999999999999999999999 99999999996544332210000000 025899998841 2110
Q ss_pred ---CCCCchHHHHHHHHHHHhhHHHHHHHHhc-----CCCCeEEEeCCchhhHHHHHHHhCCCeEEEecccHHHHHHHHh
Q 043859 79 ---VDPDAAVVTIISVIMREIKPAFRSAISAL-----KTTPTALIVDLFGTESLAIAEELQIPKYVYVGTNAWCVALFVY 150 (484)
Q Consensus 79 ---~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-----~~~pD~VI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~ 150 (484)
..........+......+.+.++++++.+ ..+|||||+|.++.|+..+|+++|||++.+++++++....+.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~ 158 (482)
T 2pq6_A 79 EGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMH 158 (482)
T ss_dssp -------CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTT
T ss_pred ccccCcchhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHH
Confidence 01011122222222245567778888765 1489999999999999999999999999999998877665543
Q ss_pred hccc--cccccCcccc---C---Cccc-cCCCCCCCCcCCCCCccccC--CchhHHHHHHhhhcccCccEEEEcChhhhc
Q 043859 151 APTL--DKTVQGQYVV---Q---NESF-NIPGCRPLRPEDVVDPMLDR--TNQQYFEYVHIGEEIPLSDGILVNTWEDLQ 219 (484)
Q Consensus 151 ~p~~--~~~~~~~~~~---~---~~~~-~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 219 (484)
++.. ....+..... . .... .+|+++.++..+++..+... .....+.+....+.....+.+++|++++||
T Consensus 159 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le 238 (482)
T 2pq6_A 159 FRSFVERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELE 238 (482)
T ss_dssp HHHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGG
T ss_pred HHHHHhcCCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHh
Confidence 3321 1111111000 0 1111 24566555555555443221 223333444445566778899999999999
Q ss_pred HHHHHHHhhccccCCCCCCCeEEeccccCC-CCC-----------C--CCccccccccCCCCCCeEEEEecCCCCCCCHH
Q 043859 220 PTALTALRDDKSLGRITKVPIYTVGPIIRR-LGP-----------A--GSWNELFDWLDKQPSESVLYVSFGSGGTLTYE 285 (484)
Q Consensus 220 ~~~~~~~~~~~~~~rp~~p~~~~vGpl~~~-~~~-----------~--~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~ 285 (484)
++.+..+++. +|++++|||++.. ... . +.+.++.+||+.++++++|||||||+...+.+
T Consensus 239 ~~~~~~~~~~-------~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~ 311 (482)
T 2pq6_A 239 SDVINALSST-------IPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPE 311 (482)
T ss_dssp HHHHHHHHTT-------CTTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHH
T ss_pred HHHHHHHHHh-------CCcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHH
Confidence 9988777665 6779999999753 111 0 12346889999987889999999999888888
Q ss_pred HHHHHHHHHhhCCCcEEEEEeCCCCCCCCCCcccCCCCCCCCCccCCCchhHHHhhcCCceEecCCcchhhhccCCCccc
Q 043859 286 QITELAWGLELSQQRFIWVVRLPNETTGDGSFFTAGSGAGDDDLSSLLPDGFLSRTLDIGVVVPQWAPQIDILSHPSVGG 365 (484)
Q Consensus 286 ~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~ipq~~vL~~~~~~~ 365 (484)
++.+++.+|+.++.+|||+++..... + ....+|+++.++.+ +|+.+.+|+||.++|+|+++++
T Consensus 312 ~~~~~~~~l~~~~~~~l~~~~~~~~~--------------~--~~~~l~~~~~~~~~-~~~~v~~~~pq~~~L~h~~~~~ 374 (482)
T 2pq6_A 312 QLLEFAWGLANCKKSFLWIIRPDLVI--------------G--GSVIFSSEFTNEIA-DRGLIASWCPQDKVLNHPSIGG 374 (482)
T ss_dssp HHHHHHHHHHHTTCEEEEECCGGGST--------------T--TGGGSCHHHHHHHT-TTEEEESCCCHHHHHTSTTEEE
T ss_pred HHHHHHHHHHhcCCcEEEEEcCCccc--------------c--ccccCcHhHHHhcC-CCEEEEeecCHHHHhcCCCCCE
Confidence 89999999999999999998543110 0 01237788877764 4777779999999999999999
Q ss_pred cccccCchhHHHHHhcCCceeecccccccchhHHHHHhhhcceEEeeecCCCCccCHHHHHHHHHHHhcccchHHHHHHH
Q 043859 366 FLSHCGWNSTLESITNGVPMIVWPLYSEQRMNATILTEELGVAIRSKVLPSKGVVGREEIKTMVRRILVDEEGYEIRAKV 445 (484)
Q Consensus 366 ~ItHgG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~g~~l~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a 445 (484)
||||||+||++|++++|||||++|+++||+.||+++++++|+|+.++ ..+++++|+++|+++|.|++++.||+||
T Consensus 375 ~vth~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~-----~~~~~~~l~~~i~~ll~~~~~~~~r~~a 449 (482)
T 2pq6_A 375 FLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-----TNVKREELAKLINEVIAGDKGKKMKQKA 449 (482)
T ss_dssp EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC-----SSCCHHHHHHHHHHHHTSHHHHHHHHHH
T ss_pred EEecCCcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEEC-----CCCCHHHHHHHHHHHHcCCcHHHHHHHH
Confidence 99999999999999999999999999999999999854799999985 4689999999999999988667799999
Q ss_pred HHHHHHHHHhhhcCCCChHHHHHHHHHHHhh
Q 043859 446 KELQRSAQKAWTRESGSSYSSLARLAKECGM 476 (484)
Q Consensus 446 ~~l~~~~~~a~~~~~g~~~~~~~~~~~~~~~ 476 (484)
+++++.+++|+ .+|||+++++++|++++..
T Consensus 450 ~~l~~~~~~a~-~~gGss~~~l~~~v~~~~~ 479 (482)
T 2pq6_A 450 MELKKKAEENT-RPGGCSYMNLNKVIKDVLL 479 (482)
T ss_dssp HHHHHHHHHHT-STTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHH-hcCCcHHHHHHHHHHHHHh
Confidence 99999999999 9999999999999998743
No 4
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=1.6e-60 Score=484.08 Aligned_cols=439 Identities=29% Similarity=0.575 Sum_probs=333.8
Q ss_pred CCCCCCCCeEEEEcCCCccChHHHHHHHHHHHhcC-CCeEEEEecCCCchhHHHHHhhhcc-CCCceEEEecCCCCCCCC
Q 043859 1 MESSSSKPHAVLLASPGVGHVIPVLELGKRLVTLY-NFQVTIFVVASQTSAAESKILQSAM-SSKLCHVIEIPAPDISGL 78 (484)
Q Consensus 1 m~~~~~~~~il~~~~p~~GHv~P~l~La~~L~~r~-Gh~Vt~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~ 78 (484)
|++.++++||+++|+|++||++|++.||++|++|+ ||+|||++++.+.....+..++..+ ...+++|..+|....++.
T Consensus 3 ~~~~~~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~ 82 (463)
T 2acv_A 3 MSDINKNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVEPPPQ 82 (463)
T ss_dssp CHHHHHCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCCCCCG
T ss_pred cccCCCCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCCCCCcc
Confidence 34445678999999999999999999999999874 7999999999753211111121111 113599999986432211
Q ss_pred C-CCCchHHHHHHHHHHHhhHHHHHHHHhc-CCCCeEEEeCCchhhHHHHHHHhCCCeEEEecccHHHHHHHHhhccccc
Q 043859 79 V-DPDAAVVTIISVIMREIKPAFRSAISAL-KTTPTALIVDLFGTESLAIAEELQIPKYVYVGTNAWCVALFVYAPTLDK 156 (484)
Q Consensus 79 ~-~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~pD~VI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~ 156 (484)
. ....... +...+..+.+.++++++++ ..+|||||+|.+..|+..+|+++|||++++++++++.+..+.++|....
T Consensus 83 ~~~~~~~~~--~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~ 160 (463)
T 2acv_A 83 ELLKSPEFY--ILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQI 160 (463)
T ss_dssp GGGGSHHHH--HHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCT
T ss_pred cccCCccHH--HHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhcc
Confidence 0 0111111 4455566777888999883 2389999999999999999999999999999999988777776665431
Q ss_pred cccCccccCCc---cccCCCC-CCCCcCCCCCccccCCchhHHHHHHhhhcccCccEEEEcChhhhcHHHHHHHhhcccc
Q 043859 157 TVQGQYVVQNE---SFNIPGC-RPLRPEDVVDPMLDRTNQQYFEYVHIGEEIPLSDGILVNTWEDLQPTALTALRDDKSL 232 (484)
Q Consensus 157 ~~~~~~~~~~~---~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~ 232 (484)
. ........ ...+|++ +++...+++..+..+ ...+..+......+++.+++++|++.+|++..+..+.+..
T Consensus 161 ~--~~~~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~-- 235 (463)
T 2acv_A 161 E--EVFDDSDRDHQLLNIPGISNQVPSNVLPDACFNK-DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHD-- 235 (463)
T ss_dssp T--CCCCCSSGGGCEECCTTCSSCEEGGGSCHHHHCT-TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHC--
T ss_pred c--CCCCCccccCceeECCCCCCCCChHHCchhhcCC-chHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhcc--
Confidence 1 11111111 3457777 666666665444433 3355555556666778889999999999999888877641
Q ss_pred CCCCCCCeEEeccccCCCC-C--C---CCccccccccCCCCCCeEEEEecCCCC-CCCHHHHHHHHHHHhhCCCcEEEEE
Q 043859 233 GRITKVPIYTVGPIIRRLG-P--A---GSWNELFDWLDKQPSESVLYVSFGSGG-TLTYEQITELAWGLELSQQRFIWVV 305 (484)
Q Consensus 233 ~rp~~p~~~~vGpl~~~~~-~--~---~~~~~~~~~l~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~al~~~~~~~i~~~ 305 (484)
+| .|++++|||++.... + . ..+.++.+||+.++++++|||||||+. ....+++.+++.+|+.++++|||++
T Consensus 236 -~p-~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~ 313 (463)
T 2acv_A 236 -EK-IPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSN 313 (463)
T ss_dssp -TT-SCCEEECCCCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred -cc-CCcEEEeCCCcccccccccccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEE
Confidence 23 457999999986532 1 1 134678999999888899999999998 7788889999999999999999998
Q ss_pred eCCCCCCCCCCcccCCCCCCCCCccCCCchhHHHhh--cCCceEecCCcchhhhccCCCccccccccCchhHHHHHhcCC
Q 043859 306 RLPNETTGDGSFFTAGSGAGDDDLSSLLPDGFLSRT--LDIGVVVPQWAPQIDILSHPSVGGFLSHCGWNSTLESITNGV 383 (484)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~--~~~~v~v~~~ipq~~vL~~~~~~~~ItHgG~gs~~eal~~Gv 383 (484)
+.. ...+|+++.++. +. ++.+.+|+||.++|+|+++++||||||+||++|++++||
T Consensus 314 ~~~---------------------~~~l~~~~~~~~~~~~-~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~Gv 371 (463)
T 2acv_A 314 SAE---------------------KKVFPEGFLEWMELEG-KGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGV 371 (463)
T ss_dssp CCC---------------------GGGSCTTHHHHHHHHC-SEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTC
T ss_pred CCC---------------------cccCChhHHHhhccCC-CEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCC
Confidence 431 123667777665 44 566668999999999999999999999999999999999
Q ss_pred ceeecccccccchhHHHHHhhhcceEEe-eecCCCC--ccCHHHHHHHHHHHhc-ccchHHHHHHHHHHHHHHHHhhhcC
Q 043859 384 PMIVWPLYSEQRMNATILTEELGVAIRS-KVLPSKG--VVGREEIKTMVRRILV-DEEGYEIRAKVKELQRSAQKAWTRE 459 (484)
Q Consensus 384 P~v~~P~~~DQ~~na~rv~~~~G~g~~l-~~~~~~~--~~~~~~l~~~i~~vl~-~~~~~~~~~~a~~l~~~~~~a~~~~ 459 (484)
|||++|+++||+.||+++++++|+|+.+ ... ++. .+++++|+++|+++|+ +++ ||+||+++++.+++|+ .+
T Consensus 372 P~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~-~~~~~~~~~~~l~~ai~~ll~~~~~---~r~~a~~l~~~~~~a~-~~ 446 (463)
T 2acv_A 372 PILTWPIYAEQQLNAFRLVKEWGVGLGLRVDY-RKGSDVVAAEEIEKGLKDLMDKDSI---VHKKVQEMKEMSRNAV-VD 446 (463)
T ss_dssp CEEECCCSTTHHHHHHHHHHTSCCEEESCSSC-CTTCCCCCHHHHHHHHHHHTCTTCT---HHHHHHHHHHHHHHHT-ST
T ss_pred CeeeccchhhhHHHHHHHHHHcCeEEEEeccc-CCCCccccHHHHHHHHHHHHhccHH---HHHHHHHHHHHHHHHH-hc
Confidence 9999999999999999953699999998 211 114 6899999999999997 355 9999999999999999 99
Q ss_pred CCChHHHHHHHHHHHh
Q 043859 460 SGSSYSSLARLAKECG 475 (484)
Q Consensus 460 ~g~~~~~~~~~~~~~~ 475 (484)
|||++.++++|++++.
T Consensus 447 gGss~~~l~~~v~~~~ 462 (463)
T 2acv_A 447 GGSSLISVGKLIDDIT 462 (463)
T ss_dssp TSHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHhc
Confidence 9999999999999873
No 5
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=4.8e-60 Score=479.23 Aligned_cols=438 Identities=24% Similarity=0.410 Sum_probs=315.0
Q ss_pred CCCCCCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCe--EEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCCCCC
Q 043859 1 MESSSSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQ--VTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDISGL 78 (484)
Q Consensus 1 m~~~~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~--Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 78 (484)
|+.+++++||+++|+|++||++|++.||++|++| ||+ |||++++.....+.+...... ..+++|+.++.. ++..
T Consensus 1 m~~~~~~~hvv~~p~p~~GHi~P~l~la~~L~~r-Gh~v~vt~~~t~~~~~~~~~~~~~~~--~~~i~~~~i~~g-lp~~ 76 (456)
T 2c1x_A 1 MSQTTTNPHVAVLAFPFSTHAAPLLAVVRRLAAA-APHAVFSFFSTSQSNASIFHDSMHTM--QCNIKSYDISDG-VPEG 76 (456)
T ss_dssp ------CCEEEEECCCSSSSHHHHHHHHHHHHHH-CTTSEEEEEECHHHHHHHC---------CTTEEEEECCCC-CCTT
T ss_pred CCCCCCCCEEEEEcCcccchHHHHHHHHHHHHhC-CCCeEEEEEeCchhHHHhhccccccC--CCceEEEeCCCC-CCCc
Confidence 7777788999999999999999999999999999 655 577887643322211111110 135899988742 2211
Q ss_pred CCCCchHHHHHHHHHHHhhHHHHHHHHhc----CCCCeEEEeCCchhhHHHHHHHhCCCeEEEecccHHHHHHHHhhccc
Q 043859 79 VDPDAAVVTIISVIMREIKPAFRSAISAL----KTTPTALIVDLFGTESLAIAEELQIPKYVYVGTNAWCVALFVYAPTL 154 (484)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~~pD~VI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~ 154 (484)
..........+..+.+.+.+.++++++++ ..+|||||+|.++.|+..+|+++|||+|.+++++++.+....+.+..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~ 156 (456)
T 2c1x_A 77 YVFAGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEI 156 (456)
T ss_dssp CCCCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHH
T ss_pred ccccCChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHH
Confidence 00011111112222233333444444432 35899999999999999999999999999999988776655444332
Q ss_pred ccccc--CccccCCcc-ccCCCCCCCCcCCCCCccccCC--chhHHHHHHhhhcccCccEEEEcChhhhcHHHHHHHhhc
Q 043859 155 DKTVQ--GQYVVQNES-FNIPGCRPLRPEDVVDPMLDRT--NQQYFEYVHIGEEIPLSDGILVNTWEDLQPTALTALRDD 229 (484)
Q Consensus 155 ~~~~~--~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~ 229 (484)
..... ......... ..+|+++.++..+++..+.... ......+.+.....+..+.+++|++.+||+..+..+++.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~ 236 (456)
T 2c1x_A 157 REKIGVSGIQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSK 236 (456)
T ss_dssp HHHHCSSCCTTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHH
T ss_pred HhccCCcccccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhc
Confidence 21111 000011111 2367777666666665432211 122233333344456788999999999999988877766
Q ss_pred cccCCCCCCCeEEeccccCCCCCC--CCccccccccCCCCCCeEEEEecCCCCCCCHHHHHHHHHHHhhCCCcEEEEEeC
Q 043859 230 KSLGRITKVPIYTVGPIIRRLGPA--GSWNELFDWLDKQPSESVLYVSFGSGGTLTYEQITELAWGLELSQQRFIWVVRL 307 (484)
Q Consensus 230 ~~~~rp~~p~~~~vGpl~~~~~~~--~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 307 (484)
+|++++|||++...... +.+.++.+|++..+++++|||||||+.....+++.+++.+|+.++.+|||+++.
T Consensus 237 -------~~~~~~vGpl~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~ 309 (456)
T 2c1x_A 237 -------LKTYLNIGPFNLITPPPVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRD 309 (456)
T ss_dssp -------SSCEEECCCHHHHC---------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCG
T ss_pred -------CCCEEEecCcccCcccccccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECC
Confidence 67899999998643211 123568899998878899999999998878888999999999999999999843
Q ss_pred CCCCCCCCCcccCCCCCCCCCccCCCchhHHHhhcCCceEecCCcchhhhccCCCccccccccCchhHHHHHhcCCceee
Q 043859 308 PNETTGDGSFFTAGSGAGDDDLSSLLPDGFLSRTLDIGVVVPQWAPQIDILSHPSVGGFLSHCGWNSTLESITNGVPMIV 387 (484)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~ipq~~vL~~~~~~~~ItHgG~gs~~eal~~GvP~v~ 387 (484)
. ....+|+++.++.+ .|+.+.+|+||.++|+|+++++||||||+||++|++++|||||+
T Consensus 310 ~--------------------~~~~l~~~~~~~~~-~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~ 368 (456)
T 2c1x_A 310 K--------------------ARVHLPEGFLEKTR-GYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLIC 368 (456)
T ss_dssp G--------------------GGGGSCTTHHHHHT-TTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEE
T ss_pred c--------------------chhhCCHHHHhhcC-CceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEe
Confidence 2 12457777776654 46777799999999999999999999999999999999999999
Q ss_pred cccccccchhHHHHHhhh-cceEEeeecCCCCccCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhhhcCCCChHHH
Q 043859 388 WPLYSEQRMNATILTEEL-GVAIRSKVLPSKGVVGREEIKTMVRRILVDEEGYEIRAKVKELQRSAQKAWTRESGSSYSS 466 (484)
Q Consensus 388 ~P~~~DQ~~na~rv~~~~-G~g~~l~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~~~g~~~~~ 466 (484)
+|++.||+.||++++ +. |+|+.+.. ..+++++|+++|+++|.|++++.||+||+++++.+++|+ .+|||++.+
T Consensus 369 ~P~~~dQ~~Na~~l~-~~~g~g~~l~~----~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~-~~gGsS~~~ 442 (456)
T 2c1x_A 369 RPFFGDQRLNGRMVE-DVLEIGVRIEG----GVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAV-GPKGSSTEN 442 (456)
T ss_dssp CCCSTTHHHHHHHHH-HTSCCEEECGG----GSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHT-STTCHHHHH
T ss_pred cCChhhHHHHHHHHH-HHhCeEEEecC----CCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhh-hcCCcHHHH
Confidence 999999999999995 65 99999863 578999999999999998766679999999999999999 999999999
Q ss_pred HHHHHHHHhh
Q 043859 467 LARLAKECGM 476 (484)
Q Consensus 467 ~~~~~~~~~~ 476 (484)
+++|++++..
T Consensus 443 l~~~v~~~~~ 452 (456)
T 2c1x_A 443 FITLVDLVSK 452 (456)
T ss_dssp HHHHHHHHTS
T ss_pred HHHHHHHHHh
Confidence 9999998743
No 6
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=4.2e-45 Score=365.80 Aligned_cols=345 Identities=17% Similarity=0.208 Sum_probs=225.4
Q ss_pred CCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCC---------C
Q 043859 5 SSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPD---------I 75 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~---------~ 75 (484)
.++|||+|+++|+.||++|+++||++|++| ||+|||++++.+.+. .+ .+ +.+..+.... .
T Consensus 20 ~~~MRIL~~~~p~~GHv~P~l~LA~~L~~r-Gh~Vt~~t~~~~~~~-~~-----~g----~~~~~~~~~~~~~~~~~~~~ 88 (400)
T 4amg_A 20 FQSMRALFITSPGLSHILPTVPLAQALRAL-GHEVRYATGGDIRAV-AE-----AG----LCAVDVSPGVNYAKLFVPDD 88 (400)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEECSSTHHH-HT-----TT----CEEEESSTTCCSHHHHSCCC
T ss_pred CCCCeEEEECCCchhHHHHHHHHHHHHHHC-CCEEEEEeCcchhhH-Hh-----cC----CeeEecCCchhHhhhccccc
Confidence 567999999999999999999999999999 999999999876532 11 22 4444433210 0
Q ss_pred CCCCC----C--Cch-HHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCchhhHHHHHHHhCCCeEEEecccHHHHHHH
Q 043859 76 SGLVD----P--DAA-VVTIISVIMREIKPAFRSAISALKTTPTALIVDLFGTESLAIAEELQIPKYVYVGTNAWCVALF 148 (484)
Q Consensus 76 ~~~~~----~--~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~ 148 (484)
..... . ... ....+..........+.+.++++ +||+||+|.+++++..+|+.+|||++.+...+.......
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~ 166 (400)
T 4amg_A 89 TDVTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARSW--RPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGL 166 (400)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHH
T ss_pred cccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCEEEECcchHHHHHHHHHcCCCceeecccccccccch
Confidence 00000 0 000 11112233344556677788888 999999999999999999999999988765432111110
Q ss_pred HhhccccccccCccccCCccccCCCCCCCCcCCCCCccccCCchhHHHHHHhh-hcccCccEEEEcChhhhcHHHHHHHh
Q 043859 149 VYAPTLDKTVQGQYVVQNESFNIPGCRPLRPEDVVDPMLDRTNQQYFEYVHIG-EEIPLSDGILVNTWEDLQPTALTALR 227 (484)
Q Consensus 149 ~~~p~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~l~~~~~~~~~ 227 (484)
... ....+....... ............... .......
T Consensus 167 ~~~--------------------------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 204 (400)
T 4amg_A 167 GAL--------------------------------------IRRAMSKDYERHGVTGEPTGSVRLTTTP----PSVEALL 204 (400)
T ss_dssp HHH--------------------------------------HHHHTHHHHHHTTCCCCCSCEEEEECCC----HHHHHTS
T ss_pred hhH--------------------------------------HHHHHHHHHHHhCCCcccccchhhcccC----chhhccC
Confidence 000 000001111111 111111111111111 1111111
Q ss_pred hccccCCCCCCCeEEeccccCCCCCCCCccccccccCCCCCCeEEEEecCCCCCCC--HHHHHHHHHHHhhCCCcEEEEE
Q 043859 228 DDKSLGRITKVPIYTVGPIIRRLGPAGSWNELFDWLDKQPSESVLYVSFGSGGTLT--YEQITELAWGLELSQQRFIWVV 305 (484)
Q Consensus 228 ~~~~~~rp~~p~~~~vGpl~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~--~~~~~~~~~al~~~~~~~i~~~ 305 (484)
+. ... .+..+.+.+.... ....+.+|++..+++++||||+||+.... .+.+.+++.+++..+.+++|.+
T Consensus 205 ~~-~~~---~~~~~~~~~~~~~-----~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~ 275 (400)
T 4amg_A 205 PE-DRR---SPGAWPMRYVPYN-----GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTL 275 (400)
T ss_dssp CG-GGC---CTTCEECCCCCCC-----CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEEC
T ss_pred cc-ccc---CCcccCccccccc-----ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEe
Confidence 10 000 2223333333222 34556679988888999999999985443 3468889999999999999998
Q ss_pred eCCCCCCCCCCcccCCCCCCCCCccCCCchhHHHhhcCCceEecCCcchhhhccCCCccccccccCchhHHHHHhcCCce
Q 043859 306 RLPNETTGDGSFFTAGSGAGDDDLSSLLPDGFLSRTLDIGVVVPQWAPQIDILSHPSVGGFLSHCGWNSTLESITNGVPM 385 (484)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~ipq~~vL~~~~~~~~ItHgG~gs~~eal~~GvP~ 385 (484)
...... ....+|+ |+.+.+|+||.++|+|++ +||||||+||++||+++||||
T Consensus 276 ~~~~~~-----------------~~~~~~~---------~v~~~~~~p~~~lL~~~~--~~v~h~G~~s~~Eal~~GvP~ 327 (400)
T 4amg_A 276 GGGDLA-----------------LLGELPA---------NVRVVEWIPLGALLETCD--AIIHHGGSGTLLTALAAGVPQ 327 (400)
T ss_dssp CTTCCC-----------------CCCCCCT---------TEEEECCCCHHHHHTTCS--EEEECCCHHHHHHHHHHTCCE
T ss_pred cCcccc-----------------ccccCCC---------CEEEEeecCHHHHhhhhh--heeccCCccHHHHHHHhCCCE
Confidence 544221 2344555 899999999999999999 899999999999999999999
Q ss_pred eecccccccchhHHHHHhhhcceEEeeecCCCCccCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHH
Q 043859 386 IVWPLYSEQRMNATILTEELGVAIRSKVLPSKGVVGREEIKTMVRRILVDEEGYEIRAKVKELQRSAQ 453 (484)
Q Consensus 386 v~~P~~~DQ~~na~rv~~~~G~g~~l~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~ 453 (484)
|++|+++||+.||.++ ++.|+|+.++. ...++ ++|+++|+|++ ||+||++++++++
T Consensus 328 v~~P~~~dQ~~na~~v-~~~G~g~~l~~----~~~~~----~al~~lL~d~~---~r~~a~~l~~~~~ 383 (400)
T 4amg_A 328 CVIPHGSYQDTNRDVL-TGLGIGFDAEA----GSLGA----EQCRRLLDDAG---LREAALRVRQEMS 383 (400)
T ss_dssp EECCC---CHHHHHHH-HHHTSEEECCT----TTCSH----HHHHHHHHCHH---HHHHHHHHHHHHH
T ss_pred EEecCcccHHHHHHHH-HHCCCEEEcCC----CCchH----HHHHHHHcCHH---HHHHHHHHHHHHH
Confidence 9999999999999999 69999999863 45554 56778899987 9999999999976
No 7
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=3.1e-43 Score=355.07 Aligned_cols=379 Identities=19% Similarity=0.205 Sum_probs=248.8
Q ss_pred CCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCCCCCC-----
Q 043859 5 SSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDISGLV----- 79 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~----- 79 (484)
|+.|||+|+++|+.||++|+++||++|+++ ||+|+|++++.+.+.+ +..+ ++|..++........
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~~-Gh~V~~~~~~~~~~~~-----~~~g----~~~~~~~~~~~~~~~~~~~~ 79 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVAR-GHRVSYAITDEFAAQV-----KAAG----ATPVVYDSILPKESNPEESW 79 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHHT-TCEEEEEECGGGHHHH-----HHHT----CEEEECCCCSCCTTCTTCCC
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHHC-CCeEEEEeCHHHHHHH-----HhCC----CEEEecCccccccccchhhc
Confidence 556899999999999999999999999999 9999999998765443 3344 677777642111110
Q ss_pred CCC-chHHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCchhhHHHHHHHhCCCeEEEecccHHHHHHHHhhccccccc
Q 043859 80 DPD-AAVVTIISVIMREIKPAFRSAISALKTTPTALIVDLFGTESLAIAEELQIPKYVYVGTNAWCVALFVYAPTLDKTV 158 (484)
Q Consensus 80 ~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~ 158 (484)
+.+ ......+........+.+.+++++. +||+||+|.+.+++..+|+++|||++.+++++....... ..+....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~-~~~~~~~-- 154 (424)
T 2iya_A 80 PEDQESAMGLFLDEAVRVLPQLEDAYADD--RPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFE-EDVPAVQ-- 154 (424)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHHTTTS--CCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHH-HHSGGGS--
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccc-ccccccc--
Confidence 111 1111122222334445566666666 999999999888899999999999999987664111110 0000000
Q ss_pred cCccccCCccccCCCCCCCCcCCCCCc--cccCCchhHHHHHHhhh-------cccCccEEEEcChhhhcHHHHHHHhhc
Q 043859 159 QGQYVVQNESFNIPGCRPLRPEDVVDP--MLDRTNQQYFEYVHIGE-------EIPLSDGILVNTWEDLQPTALTALRDD 229 (484)
Q Consensus 159 ~~~~~~~~~~~~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~~~l~~~~~~~~~~~ 229 (484)
. ...........|...... ..+... ........+..+..... .....+.+++++...++++
T Consensus 155 ~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~-------- 224 (424)
T 2iya_A 155 D-PTADRGEEAAAPAGTGDA-EEGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIK-------- 224 (424)
T ss_dssp C-CCC----------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTT--------
T ss_pred c-cccccccccccccccccc-hhhhccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCC--------
Confidence 0 000000000000000000 000000 00000000111111100 0013456677777777643
Q ss_pred cccCCCCCC-CeEEeccccCCCCCCCCccccccccCCCCCCeEEEEecCCCCCCCHHHHHHHHHHHhhCCCcEEEEEeCC
Q 043859 230 KSLGRITKV-PIYTVGPIIRRLGPAGSWNELFDWLDKQPSESVLYVSFGSGGTLTYEQITELAWGLELSQQRFIWVVRLP 308 (484)
Q Consensus 230 ~~~~rp~~p-~~~~vGpl~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 308 (484)
...++ ++++|||++... .+..+|+...+++++|||++||......+.+..++++++..+.+++|.++..
T Consensus 225 ----~~~~~~~~~~vGp~~~~~------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~g~~ 294 (424)
T 2iya_A 225 ----GDTVGDNYTFVGPTYGDR------SHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSVGRF 294 (424)
T ss_dssp ----GGGCCTTEEECCCCCCCC------GGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEECCTT
T ss_pred ----ccCCCCCEEEeCCCCCCc------ccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEECCc
Confidence 11144 499999986431 1245787766567899999999986567789999999988889999987432
Q ss_pred CCCCCCCCcccCCCCCCCCCccCCCchhHHHhhcCCceEecCCcchhhhccCCCccccccccCchhHHHHHhcCCceeec
Q 043859 309 NETTGDGSFFTAGSGAGDDDLSSLLPDGFLSRTLDIGVVVPQWAPQIDILSHPSVGGFLSHCGWNSTLESITNGVPMIVW 388 (484)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~ipq~~vL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~ 388 (484)
.. ......+| .|+.+.+|+||.++|++++ +||||||+||++||+++|||+|++
T Consensus 295 ~~----------------~~~~~~~~---------~~v~~~~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~~G~P~i~~ 347 (424)
T 2iya_A 295 VD----------------PADLGEVP---------PNVEVHQWVPQLDILTKAS--AFITHAGMGSTMEALSNAVPMVAV 347 (424)
T ss_dssp SC----------------GGGGCSCC---------TTEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHTTCCEEEC
T ss_pred CC----------------hHHhccCC---------CCeEEecCCCHHHHHhhCC--EEEECCchhHHHHHHHcCCCEEEe
Confidence 11 00111233 3899999999999999999 899999999999999999999999
Q ss_pred ccccccchhHHHHHhhhcceEEeeecCCCCccCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHH
Q 043859 389 PLYSEQRMNATILTEELGVAIRSKVLPSKGVVGREEIKTMVRRILVDEEGYEIRAKVKELQRSAQ 453 (484)
Q Consensus 389 P~~~DQ~~na~rv~~~~G~g~~l~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~ 453 (484)
|...||+.||.++ ++.|+|+.+.. +.+++++|.++|+++|+|++ |+++++++++.++
T Consensus 348 p~~~dQ~~na~~l-~~~g~g~~~~~----~~~~~~~l~~~i~~ll~~~~---~~~~~~~~~~~~~ 404 (424)
T 2iya_A 348 PQIAEQTMNAERI-VELGLGRHIPR----DQVTAEKLREAVLAVASDPG---VAERLAAVRQEIR 404 (424)
T ss_dssp CCSHHHHHHHHHH-HHTTSEEECCG----GGCCHHHHHHHHHHHHHCHH---HHHHHHHHHHHHH
T ss_pred cCccchHHHHHHH-HHCCCEEEcCc----CCCCHHHHHHHHHHHHcCHH---HHHHHHHHHHHHH
Confidence 9999999999999 68999999864 57899999999999999987 9999999999865
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=7.5e-41 Score=336.52 Aligned_cols=364 Identities=15% Similarity=0.140 Sum_probs=234.4
Q ss_pred CeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCCCCCCCC-CchHH
Q 043859 8 PHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDISGLVDP-DAAVV 86 (484)
Q Consensus 8 ~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~~ 86 (484)
|||+|++.++.||++|+++||++|+++ ||+|+|++++.+.+. ++..+ ++++.++.... +.+.. .....
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~-Gh~V~~~~~~~~~~~-----v~~~g----~~~~~i~~~~~-~~~~~~~~~~~ 69 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDL-GADVRMCAPPDCAER-----LAEVG----VPHVPVGPSAR-APIQRAKPLTA 69 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHT-TCEEEEEECGGGHHH-----HHHTT----CCEEECCC--------CCSCCCH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHC-CCeEEEEcCHHHHHH-----HHHcC----CeeeeCCCCHH-HHhhcccccch
Confidence 799999999999999999999999999 999999999975432 33344 77777775321 11010 00111
Q ss_pred HHHHHHHHHh-hHHHHHHHHhcCCCCeEEEeCC-chhh--HHHHHHHhCCCeEEEecccHHHHHHHHhhccccccccCcc
Q 043859 87 TIISVIMREI-KPAFRSAISALKTTPTALIVDL-FGTE--SLAIAEELQIPKYVYVGTNAWCVALFVYAPTLDKTVQGQY 162 (484)
Q Consensus 87 ~~~~~~~~~~-~~~l~~~l~~~~~~pD~VI~D~-~~~~--~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~ 162 (484)
..+....... ...++++.+. ..+||+||+|. +.++ +..+|+++|||++.+++++.+... .++|...
T Consensus 70 ~~~~~~~~~~~~~~~~~l~~~-~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~--~~~p~~~------- 139 (415)
T 1iir_A 70 EDVRRFTTEAIATQFDEIPAA-AEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPS--PYYPPPP------- 139 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-TTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCC--SSSCCCC-------
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCC--cccCCcc-------
Confidence 1121222211 2233444331 23999999997 6777 788999999999999876532100 0000000
Q ss_pred ccCCccccCCCCCCCCcCCCCCccccCC-chhHHHHHHhhh-c--ccC---------ccEEEEcChhhhcHHHHHHHhhc
Q 043859 163 VVQNESFNIPGCRPLRPEDVVDPMLDRT-NQQYFEYVHIGE-E--IPL---------SDGILVNTWEDLQPTALTALRDD 229 (484)
Q Consensus 163 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~--~~~---------~~~~l~~~~~~l~~~~~~~~~~~ 229 (484)
. .+.+|+ ......+...+.... ...+....+... . +.. ...+++++.+.+++.
T Consensus 140 ~----~~~~~~--~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~l~~~-------- 205 (415)
T 1iir_A 140 L----GEPSTQ--DTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTDHPWVAADPVLAPL-------- 205 (415)
T ss_dssp ---------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCC--------
T ss_pred C----Cccccc--hHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCCCEEEeeChhhcCC--------
Confidence 0 000000 000000000000000 000000001110 0 000 013455555555430
Q ss_pred cccCCCCCCCeEEeccccCCCCCCCCccccccccCCCCCCeEEEEecCCCCCCCHHHHHHHHHHHhhCCCcEEEEEeCCC
Q 043859 230 KSLGRITKVPIYTVGPIIRRLGPAGSWNELFDWLDKQPSESVLYVSFGSGGTLTYEQITELAWGLELSQQRFIWVVRLPN 309 (484)
Q Consensus 230 ~~~~rp~~p~~~~vGpl~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~ 309 (484)
+++.+ ++++|||+..... ...+.++.+|++.. +++|||++||+. ...+.+..++++++..+.+++|+++...
T Consensus 206 ---~~~~~-~~~~vG~~~~~~~-~~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~~v~~~g~~~ 277 (415)
T 1iir_A 206 ---QPTDL-DAVQTGAWILPDE-RPLSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIRAHGRRVILSRGWAD 277 (415)
T ss_dssp ---CCCSS-CCEECCCCCCCCC-CCCCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHHHTTCCEEECTTCTT
T ss_pred ---CcccC-CeEeeCCCccCcc-cCCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 13334 7999999987532 23467788999764 368999999987 5677788999999999999999874321
Q ss_pred CCCCCCCcccCCCCCCCCCccCCCchhHHHhhcCCceEecCCcchhhhccCCCccccccccCchhHHHHHhcCCceeecc
Q 043859 310 ETTGDGSFFTAGSGAGDDDLSSLLPDGFLSRTLDIGVVVPQWAPQIDILSHPSVGGFLSHCGWNSTLESITNGVPMIVWP 389 (484)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~ipq~~vL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~P 389 (484)
. ....+|+ |+.+.+|+||.++|++++ +||||||+||++|++++|||+|++|
T Consensus 278 ~------------------~~~~~~~---------~v~~~~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~~G~P~i~~p 328 (415)
T 1iir_A 278 L------------------VLPDDGA---------DCFAIGEVNHQVLFGRVA--AVIHHGGAGTTHVAARAGAPQILLP 328 (415)
T ss_dssp C------------------CCSSCGG---------GEEECSSCCHHHHGGGSS--EEEECCCHHHHHHHHHHTCCEEECC
T ss_pred c------------------cccCCCC---------CEEEeCcCChHHHHhhCC--EEEeCCChhHHHHHHHcCCCEEECC
Confidence 1 0112333 899999999999998888 8999999999999999999999999
Q ss_pred cccccchhHHHHHhhhcceEEeeecCCCCccCHHHHHHHHHHHhcccchHHHHHHHHHHHHHH
Q 043859 390 LYSEQRMNATILTEELGVAIRSKVLPSKGVVGREEIKTMVRRILVDEEGYEIRAKVKELQRSA 452 (484)
Q Consensus 390 ~~~DQ~~na~rv~~~~G~g~~l~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~ 452 (484)
...||..||.++ ++.|+|+.++. ..+++++|.++|.++ .|++ |+++++++++.+
T Consensus 329 ~~~dQ~~na~~l-~~~g~g~~~~~----~~~~~~~l~~~i~~l-~~~~---~~~~~~~~~~~~ 382 (415)
T 1iir_A 329 QMADQPYYAGRV-AELGVGVAHDG----PIPTFDSLSAALATA-LTPE---THARATAVAGTI 382 (415)
T ss_dssp CSTTHHHHHHHH-HHHTSEEECSS----SSCCHHHHHHHHHHH-TSHH---HHHHHHHHHHHS
T ss_pred CCCccHHHHHHH-HHCCCcccCCc----CCCCHHHHHHHHHHH-cCHH---HHHHHHHHHHHH
Confidence 999999999999 79999999863 578999999999999 8876 999999998884
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=4.4e-40 Score=331.06 Aligned_cols=362 Identities=14% Similarity=0.068 Sum_probs=236.9
Q ss_pred CeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCCCCCCCC--CchH
Q 043859 8 PHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDISGLVDP--DAAV 85 (484)
Q Consensus 8 ~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~--~~~~ 85 (484)
|||+|++.++.||++|+++||++|+++ ||+|+|++++.+.+. ++..+ +++..++... .+.... ....
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~-Gh~V~~~~~~~~~~~-----v~~~g----~~~~~~~~~~-~~~~~~~~~~~~ 69 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKAL-GVQTRMCAPPAAEER-----LAEVG----VPHVPVGLPQ-HMMLQEGMPPPP 69 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHT-TCEEEEEECGGGHHH-----HHHHT----CCEEECSCCG-GGCCCTTSCCCC
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHC-CCeEEEEeCHHHHHH-----HHHcC----CeeeecCCCH-HHHHhhccccch
Confidence 799999999999999999999999999 999999999865433 33444 6677776531 111111 0011
Q ss_pred HHHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCC-chhh--HHHHHHHhCCCeEEEecccHHHHHHHHhhccccccccCcc
Q 043859 86 VTIISVIMREIKPAFRSAISALKTTPTALIVDL-FGTE--SLAIAEELQIPKYVYVGTNAWCVALFVYAPTLDKTVQGQY 162 (484)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~-~~~~--~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~ 162 (484)
...+..........+.+.+.....+||+||+|. +.++ +..+|+.+|||++.+.+++.+.... ++| ..
T Consensus 70 ~~~~~~~~~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~~--~~p--------~~ 139 (416)
T 1rrv_A 70 PEEEQRLAAMTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLASP--HLP--------PA 139 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCCS--SSC--------CC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCCc--ccC--------CC
Confidence 111222222222222233331133899999996 4566 7889999999999988765321000 000 00
Q ss_pred ccCCccccC-CCCCCCCcCCCCCcccc-----CCchhHHHHHHhhh---------cccCccEEEEcChhhhcHHHHHHHh
Q 043859 163 VVQNESFNI-PGCRPLRPEDVVDPMLD-----RTNQQYFEYVHIGE---------EIPLSDGILVNTWEDLQPTALTALR 227 (484)
Q Consensus 163 ~~~~~~~~~-p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~---------~~~~~~~~l~~~~~~l~~~~~~~~~ 227 (484)
.. +.+ ++.. ...+...+.. ......+.+.+... ..... .+++++.+.++++
T Consensus 140 ~~----~~~~~~r~---~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~------ 205 (416)
T 1rrv_A 140 YD----EPTTPGVT---DIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPL------ 205 (416)
T ss_dssp BC----SCCCTTCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCC------
T ss_pred CC----CCCCchHH---HHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCC------
Confidence 00 000 0100 0000000000 00000011111100 00111 4566666655432
Q ss_pred hccccCCCCCCCeEEeccccCCCCCCCCccccccccCCCCCCeEEEEecCCCCC-CCHHHHHHHHHHHhhCCCcEEEEEe
Q 043859 228 DDKSLGRITKVPIYTVGPIIRRLGPAGSWNELFDWLDKQPSESVLYVSFGSGGT-LTYEQITELAWGLELSQQRFIWVVR 306 (484)
Q Consensus 228 ~~~~~~rp~~p~~~~vGpl~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~ 306 (484)
++.+ ++++|||+..... ...+.++.+|++.. +++|||++||+.. ...+.+..++++++..+.+++|+++
T Consensus 206 ------~~~~-~~~~vG~~~~~~~-~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~v~~~g 275 (416)
T 1rrv_A 206 ------QPDV-DAVQTGAWLLSDE-RPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRG 275 (416)
T ss_dssp ------CSSC-CCEECCCCCCCCC-CCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEECT
T ss_pred ------CCCC-CeeeECCCccCcc-CCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHHHCCCeEEEEeC
Confidence 3323 7999999987532 23467788998765 3689999999864 3445688899999999999999974
Q ss_pred CCCCCCCCCCcccCCCCCCCCCccCCCchhHHHhhcCCceEecCCcchhhhccCCCccccccccCchhHHHHHhcCCcee
Q 043859 307 LPNETTGDGSFFTAGSGAGDDDLSSLLPDGFLSRTLDIGVVVPQWAPQIDILSHPSVGGFLSHCGWNSTLESITNGVPMI 386 (484)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~ipq~~vL~~~~~~~~ItHgG~gs~~eal~~GvP~v 386 (484)
.... ....+|+ |+.+.+|+||.++|++++ +||||||+||++||+++|||+|
T Consensus 276 ~~~~------------------~~~~~~~---------~v~~~~~~~~~~ll~~~d--~~v~~~G~~t~~Ea~~~G~P~i 326 (416)
T 1rrv_A 276 WTEL------------------VLPDDRD---------DCFAIDEVNFQALFRRVA--AVIHHGSAGTEHVATRAGVPQL 326 (416)
T ss_dssp TTTC------------------CCSCCCT---------TEEEESSCCHHHHGGGSS--EEEECCCHHHHHHHHHHTCCEE
T ss_pred Cccc------------------cccCCCC---------CEEEeccCChHHHhccCC--EEEecCChhHHHHHHHcCCCEE
Confidence 3211 0122333 888999999999999999 8999999999999999999999
Q ss_pred ecccccccchhHHHHHhhhcceEEeeecCCCCccCHHHHHHHHHHHhcccchHHHHHHHHHHHHHH
Q 043859 387 VWPLYSEQRMNATILTEELGVAIRSKVLPSKGVVGREEIKTMVRRILVDEEGYEIRAKVKELQRSA 452 (484)
Q Consensus 387 ~~P~~~DQ~~na~rv~~~~G~g~~l~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~ 452 (484)
++|...||+.||.++ ++.|+|+.++. ..+++++|.++|+++ .|++ |+++++++++.+
T Consensus 327 ~~p~~~dQ~~na~~l-~~~g~g~~~~~----~~~~~~~l~~~i~~l-~~~~---~~~~~~~~~~~~ 383 (416)
T 1rrv_A 327 VIPRNTDQPYFAGRV-AALGIGVAHDG----PTPTFESLSAALTTV-LAPE---TRARAEAVAGMV 383 (416)
T ss_dssp ECCCSBTHHHHHHHH-HHHTSEEECSS----SCCCHHHHHHHHHHH-TSHH---HHHHHHHHTTTC
T ss_pred EccCCCCcHHHHHHH-HHCCCccCCCC----CCCCHHHHHHHHHHh-hCHH---HHHHHHHHHHHH
Confidence 999999999999999 69999998863 578999999999999 8876 999999988873
No 10
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=1.8e-38 Score=319.30 Aligned_cols=376 Identities=15% Similarity=0.133 Sum_probs=248.3
Q ss_pred CCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCCCCCC------
Q 043859 6 SKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDISGLV------ 79 (484)
Q Consensus 6 ~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~------ 79 (484)
+.|||+|++.++.||++|+++||++|+++ ||+|+|++++.+.+. ++..+ +.+..++........
T Consensus 19 ~m~rIl~~~~~~~GHv~p~l~La~~L~~~-Gh~V~v~~~~~~~~~-----~~~~G----~~~~~~~~~~~~~~~~~~~~~ 88 (415)
T 3rsc_A 19 HMAHLLIVNVASHGLILPTLTVVTELVRR-GHRVSYVTAGGFAEP-----VRAAG----ATVVPYQSEIIDADAAEVFGS 88 (415)
T ss_dssp CCCEEEEECCSCHHHHGGGHHHHHHHHHT-TCEEEEEECGGGHHH-----HHHTT----CEEEECCCSTTTCCHHHHHHS
T ss_pred cCCEEEEEeCCCccccccHHHHHHHHHHC-CCEEEEEeCHHHHHH-----HHhcC----CEEEeccccccccccchhhcc
Confidence 45899999999999999999999999999 999999998865543 34445 777777642111000
Q ss_pred CCCchHHHH-HHHHHHHhhHHHHHHHHhcCCCCeEEEeC-CchhhHHHHHHHhCCCeEEEecccHHHHHHHHhhcccccc
Q 043859 80 DPDAAVVTI-ISVIMREIKPAFRSAISALKTTPTALIVD-LFGTESLAIAEELQIPKYVYVGTNAWCVALFVYAPTLDKT 157 (484)
Q Consensus 80 ~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~pD~VI~D-~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~ 157 (484)
......... +..........+.+.++++ +||+||+| ...+++..+|+++|||++.+.+....... +...+.....
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~~~~~~~~~ 165 (415)
T 3rsc_A 89 DDLGVRPHLMYLRENVSVLRATAEALDGD--VPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEH-YSFSQDMVTL 165 (415)
T ss_dssp SSSCHHHHHHHHHHHHHHHHHHHHHHSSS--CCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSS-CCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCc-cccccccccc
Confidence 000011111 2223333445666677777 99999999 88888889999999999988754321000 0000000000
Q ss_pred ccCccccCCccccCCCCCCCCcCCCCCccccCCchhHHHHHHhhhc-------c-cCccEEEEcChhhhcHHHHHHHhhc
Q 043859 158 VQGQYVVQNESFNIPGCRPLRPEDVVDPMLDRTNQQYFEYVHIGEE-------I-PLSDGILVNTWEDLQPTALTALRDD 229 (484)
Q Consensus 158 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~l~~~~~~l~~~~~~~~~~~ 229 (484)
. ....+ . ...........+...... . ...+..+......++..
T Consensus 166 -----------~-~~~~p--------~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~-------- 216 (415)
T 3rsc_A 166 -----------A-GTIDP--------L-DLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIA-------- 216 (415)
T ss_dssp -----------H-TCCCG--------G-GCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTT--------
T ss_pred -----------c-ccCCh--------h-hHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCC--------
Confidence 0 00000 0 000000011111111100 0 01133343333333221
Q ss_pred cccCCCCCCC-eEEeccccCCCCCCCCccccccccCCCCCCeEEEEecCCCCCCCHHHHHHHHHHHhhCCCcEEEEEeCC
Q 043859 230 KSLGRITKVP-IYTVGPIIRRLGPAGSWNELFDWLDKQPSESVLYVSFGSGGTLTYEQITELAWGLELSQQRFIWVVRLP 308 (484)
Q Consensus 230 ~~~~rp~~p~-~~~vGpl~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 308 (484)
+..++. +.++||+.... .+..+|....+++++|||++||......+.+..++++++..+.+++|.++..
T Consensus 217 ----~~~~~~~~~~vGp~~~~~------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~~ 286 (415)
T 3rsc_A 217 ----GDTFDDRFVFVGPCFDDR------RFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGGQ 286 (415)
T ss_dssp ----GGGCCTTEEECCCCCCCC------GGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTTT
T ss_pred ----cccCCCceEEeCCCCCCc------ccCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCCC
Confidence 112444 99999987541 2345676655677899999999976677789999999998888999987432
Q ss_pred CCCCCCCCcccCCCCCCCCCccCCCchhHHHhhcCCceEecCCcchhhhccCCCccccccccCchhHHHHHhcCCceeec
Q 043859 309 NETTGDGSFFTAGSGAGDDDLSSLLPDGFLSRTLDIGVVVPQWAPQIDILSHPSVGGFLSHCGWNSTLESITNGVPMIVW 388 (484)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~ipq~~vL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~ 388 (484)
.. ......+|+ |+.+.+|+|+.++|++++ ++|||||.||++|++++|+|+|++
T Consensus 287 ~~----------------~~~l~~~~~---------~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G~P~v~~ 339 (415)
T 3rsc_A 287 VD----------------PAALGDLPP---------NVEAHRWVPHVKVLEQAT--VCVTHGGMGTLMEALYWGRPLVVV 339 (415)
T ss_dssp SC----------------GGGGCCCCT---------TEEEESCCCHHHHHHHEE--EEEESCCHHHHHHHHHTTCCEEEC
T ss_pred CC----------------hHHhcCCCC---------cEEEEecCCHHHHHhhCC--EEEECCcHHHHHHHHHhCCCEEEe
Confidence 11 001122333 899999999999999999 899999999999999999999999
Q ss_pred ccccccchhHHHHHhhhcceEEeeecCCCCccCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhhhcCCCChHHHHH
Q 043859 389 PLYSEQRMNATILTEELGVAIRSKVLPSKGVVGREEIKTMVRRILVDEEGYEIRAKVKELQRSAQKAWTRESGSSYSSLA 468 (484)
Q Consensus 389 P~~~DQ~~na~rv~~~~G~g~~l~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~~~g~~~~~~~ 468 (484)
|...||+.||.++ ++.|+|+.+.. +.++++.|.++|.++|+|++ ++++++++++.+. . ..+..+.++
T Consensus 340 p~~~~q~~~a~~l-~~~g~g~~~~~----~~~~~~~l~~~i~~ll~~~~---~~~~~~~~~~~~~----~-~~~~~~~~~ 406 (415)
T 3rsc_A 340 PQSFDVQPMARRV-DQLGLGAVLPG----EKADGDTLLAAVGAVAADPA---LLARVEAMRGHVR----R-AGGAARAAD 406 (415)
T ss_dssp CCSGGGHHHHHHH-HHHTCEEECCG----GGCCHHHHHHHHHHHHTCHH---HHHHHHHHHHHHH----H-SCHHHHHHH
T ss_pred CCcchHHHHHHHH-HHcCCEEEccc----CCCCHHHHHHHHHHHHcCHH---HHHHHHHHHHHHH----h-cCHHHHHHH
Confidence 9999999999999 69999999874 67899999999999999987 9999999998864 2 234444444
Q ss_pred HHHHH
Q 043859 469 RLAKE 473 (484)
Q Consensus 469 ~~~~~ 473 (484)
.+.+.
T Consensus 407 ~i~~~ 411 (415)
T 3rsc_A 407 AVEAY 411 (415)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 11
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=3.7e-39 Score=322.82 Aligned_cols=358 Identities=15% Similarity=0.115 Sum_probs=237.6
Q ss_pred CeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCCC--CC-CCCCch
Q 043859 8 PHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDIS--GL-VDPDAA 84 (484)
Q Consensus 8 ~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~-~~~~~~ 84 (484)
|||+|++.++.||++|+++||++|+++ ||+|+|++++.+.+. ++..+ +.+..++..... .. ......
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~-Gh~V~v~~~~~~~~~-----v~~~g----~~~~~l~~~~~~~~~~~~~~~~~ 70 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLREL-GADARMCLPPDYVER-----CAEVG----VPMVPVGRAVRAGAREPGELPPG 70 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHT-TCCEEEEECGGGHHH-----HHHTT----CCEEECSSCSSGGGSCTTCCCTT
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHC-CCeEEEEeCHHHHHH-----HHHcC----CceeecCCCHHHHhccccCCHHH
Confidence 799999999999999999999999999 999999999876544 34444 666666532110 00 001111
Q ss_pred HHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCchhhH---HHHHHHhCCCeEEEecccHHHHHHHHhhccccccccCc
Q 043859 85 VVTIISVIMREIKPAFRSAISALKTTPTALIVDLFGTES---LAIAEELQIPKYVYVGTNAWCVALFVYAPTLDKTVQGQ 161 (484)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~~~~~---~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~ 161 (484)
....+..........+..++ .+||+||+|.....+ ..+|+++|||++.+..++....+. ...
T Consensus 71 ~~~~~~~~~~~~~~~l~~~~----~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~-----~~~------ 135 (404)
T 3h4t_A 71 AAEVVTEVVAEWFDKVPAAI----EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSE-----QSQ------ 135 (404)
T ss_dssp CGGGHHHHHHHHHHHHHHHH----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGG-----SCH------
T ss_pred HHHHHHHHHHHHHHHHHHHh----cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCCh-----hHH------
Confidence 11112223333333333333 279999998665544 679999999999888765421000 000
Q ss_pred cccCCccccCCCCCCCCcCCCCCccc-cCCchhHHHH---HHhhh-c--ccC---------ccEEEEcChhhhcHHHHHH
Q 043859 162 YVVQNESFNIPGCRPLRPEDVVDPML-DRTNQQYFEY---VHIGE-E--IPL---------SDGILVNTWEDLQPTALTA 225 (484)
Q Consensus 162 ~~~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~-~--~~~---------~~~~l~~~~~~l~~~~~~~ 225 (484)
..+ ..+...+..+ .+..+ . +.. .+..+.+..+.+.+
T Consensus 136 -----------------------~~~~~~~~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p----- 187 (404)
T 3h4t_A 136 -----------------------AERDMYNQGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSP----- 187 (404)
T ss_dssp -----------------------HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSC-----
T ss_pred -----------------------HHHHHHHHHHHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeC-----
Confidence 000 0000000000 01000 0 000 01112222222211
Q ss_pred HhhccccCCCCCC-CeEEeccccCCCCCCCCccccccccCCCCCCeEEEEecCCCCCCCHHHHHHHHHHHhhCCCcEEEE
Q 043859 226 LRDDKSLGRITKV-PIYTVGPIIRRLGPAGSWNELFDWLDKQPSESVLYVSFGSGGTLTYEQITELAWGLELSQQRFIWV 304 (484)
Q Consensus 226 ~~~~~~~~rp~~p-~~~~vGpl~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~ 304 (484)
.+| ++ +++++|+++.+. ....++++.+|++. .+++|||++||+.. ..+.+..++++++..+.++||+
T Consensus 188 -------~~~-~~~~~~~~G~~~~~~-~~~~~~~l~~~l~~--~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~ 255 (404)
T 3h4t_A 188 -------LRP-TDLGTVQTGAWILPD-QRPLSAELEGFLRA--GSPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLS 255 (404)
T ss_dssp -------CCT-TCCSCCBCCCCCCCC-CCCCCHHHHHHHHT--SSCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEE
T ss_pred -------CCC-CCCCeEEeCccccCC-CCCCCHHHHHHHhc--CCCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEE
Confidence 123 44 488999887652 23456788888875 35689999999976 6678999999999999999998
Q ss_pred EeCCCCCCCCCCcccCCCCCCCCCccCCCchhHHHhhcCCceEecCCcchhhhccCCCccccccccCchhHHHHHhcCCc
Q 043859 305 VRLPNETTGDGSFFTAGSGAGDDDLSSLLPDGFLSRTLDIGVVVPQWAPQIDILSHPSVGGFLSHCGWNSTLESITNGVP 384 (484)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~ipq~~vL~~~~~~~~ItHgG~gs~~eal~~GvP 384 (484)
++.... ....++ +|+.+.+|+||.++|++++ +||||||+||+.|++++|+|
T Consensus 256 ~g~~~~------------------~~~~~~---------~~v~~~~~~~~~~ll~~~d--~~v~~gG~~t~~Eal~~GvP 306 (404)
T 3h4t_A 256 SGWAGL------------------GRIDEG---------DDCLVVGEVNHQVLFGRVA--AVVHHGGAGTTTAVTRAGAP 306 (404)
T ss_dssp CTTTTC------------------CCSSCC---------TTEEEESSCCHHHHGGGSS--EEEECCCHHHHHHHHHHTCC
T ss_pred eCCccc------------------ccccCC---------CCEEEecCCCHHHHHhhCc--EEEECCcHHHHHHHHHcCCC
Confidence 753321 011123 3899999999999999999 89999999999999999999
Q ss_pred eeecccccccchhHHHHHhhhcceEEeeecCCCCccCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhhhcCCCChH
Q 043859 385 MIVWPLYSEQRMNATILTEELGVAIRSKVLPSKGVVGREEIKTMVRRILVDEEGYEIRAKVKELQRSAQKAWTRESGSSY 464 (484)
Q Consensus 385 ~v~~P~~~DQ~~na~rv~~~~G~g~~l~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~~~g~~~ 464 (484)
+|++|...||+.||.++ ++.|+|+.+.. ..++++.|.++|.++|+ ++ |+++++++++.+ .. .+..
T Consensus 307 ~v~~p~~~dQ~~na~~~-~~~G~g~~l~~----~~~~~~~l~~ai~~ll~-~~---~~~~~~~~~~~~-----~~-~~~~ 371 (404)
T 3h4t_A 307 QVVVPQKADQPYYAGRV-ADLGVGVAHDG----PTPTVESLSAALATALT-PG---IRARAAAVAGTI-----RT-DGTT 371 (404)
T ss_dssp EEECCCSTTHHHHHHHH-HHHTSEEECSS----SSCCHHHHHHHHHHHTS-HH---HHHHHHHHHTTC-----CC-CHHH
T ss_pred EEEcCCcccHHHHHHHH-HHCCCEeccCc----CCCCHHHHHHHHHHHhC-HH---HHHHHHHHHHHH-----hh-hHHH
Confidence 99999999999999999 69999999864 67899999999999998 76 999999999883 33 4444
Q ss_pred HHHHHHHHHH
Q 043859 465 SSLARLAKEC 474 (484)
Q Consensus 465 ~~~~~~~~~~ 474 (484)
+.++.+.+.+
T Consensus 372 ~~~~~i~~~~ 381 (404)
T 3h4t_A 372 VAAKLLLEAI 381 (404)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4444444433
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=1.3e-37 Score=311.40 Aligned_cols=375 Identities=19% Similarity=0.174 Sum_probs=244.4
Q ss_pred CCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCC--CCCC-CCCc
Q 043859 7 KPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDI--SGLV-DPDA 83 (484)
Q Consensus 7 ~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~-~~~~ 83 (484)
.|||+|++.++.||++|++.||++|+++ ||+|+|++++.+.+. ++..+ +.+..++.... .... ....
T Consensus 4 M~~il~~~~~~~Ghv~~~~~La~~L~~~-GheV~v~~~~~~~~~-----~~~~G----~~~~~~~~~~~~~~~~~~~~~~ 73 (402)
T 3ia7_A 4 QRHILFANVQGHGHVYPSLGLVSELARR-GHRITYVTTPLFADE-----VKAAG----AEVVLYKSEFDTFHVPEVVKQE 73 (402)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEECHHHHHH-----HHHTT----CEEEECCCGGGTSSSSSSSCCT
T ss_pred CCEEEEEeCCCCcccccHHHHHHHHHhC-CCEEEEEcCHHHHHH-----HHHcC----CEEEeccccccccccccccccc
Confidence 3599999999999999999999999999 999999998754433 34445 77777764211 0000 0111
Q ss_pred hHHHH----HHHHHHHhhHHHHHHHHhcCCCCeEEEeC-CchhhHHHHHHHhCCCeEEEecccHHHHHHHHhhccccccc
Q 043859 84 AVVTI----ISVIMREIKPAFRSAISALKTTPTALIVD-LFGTESLAIAEELQIPKYVYVGTNAWCVALFVYAPTLDKTV 158 (484)
Q Consensus 84 ~~~~~----~~~~~~~~~~~l~~~l~~~~~~pD~VI~D-~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~ 158 (484)
..... +........+.+.+.++++ +||+||+| .+.+++..+|+++|||++.+.+.......... .+.....
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~-~~~~~~~- 149 (402)
T 3ia7_A 74 DAETQLHLVYVRENVAILRAAEEALGDN--PPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSL-FKELWKS- 149 (402)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHTTC--CCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBCH-HHHHHHH-
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCccccc-ccccccc-
Confidence 12211 2222333445666777777 99999999 88888889999999999988654321000000 0000000
Q ss_pred cCccccCCccccCCCCCCCCcCCCCCccccCCchhHHHHHHhhhc-------cc-CccEEEEcChhhhcHHHHHHHhhcc
Q 043859 159 QGQYVVQNESFNIPGCRPLRPEDVVDPMLDRTNQQYFEYVHIGEE-------IP-LSDGILVNTWEDLQPTALTALRDDK 230 (484)
Q Consensus 159 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~l~~~~~~l~~~~~~~~~~~~ 230 (484)
.... .+. ...........+...... .. ..+..+......++..
T Consensus 150 ------------~~~~-------~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~--------- 200 (402)
T 3ia7_A 150 ------------NGQR-------HPA-DVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPF--------- 200 (402)
T ss_dssp ------------HTCC-------CGG-GSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTT---------
T ss_pred ------------cccc-------Chh-hHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCc---------
Confidence 0000 000 000000001111110000 00 1133333333333221
Q ss_pred ccCCCCCCC-eEEeccccCCCCCCCCccccccccCCCCCCeEEEEecCCCCCCCHHHHHHHHHHHhhCCCcEEEEEeCCC
Q 043859 231 SLGRITKVP-IYTVGPIIRRLGPAGSWNELFDWLDKQPSESVLYVSFGSGGTLTYEQITELAWGLELSQQRFIWVVRLPN 309 (484)
Q Consensus 231 ~~~rp~~p~-~~~vGpl~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~ 309 (484)
+..++. ++++||+.... .+..+|+...+++++|||++||......+.+..++++++..+.+++|.++...
T Consensus 201 ---~~~~~~~~~~vGp~~~~~------~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 271 (402)
T 3ia7_A 201 ---AETFDERFAFVGPTLTGR------DGQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGFL 271 (402)
T ss_dssp ---GGGCCTTEEECCCCCCC----------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTTS
T ss_pred ---cccCCCCeEEeCCCCCCc------ccCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCcC
Confidence 111344 99999987542 23445665556678999999999776777899999999988888888874321
Q ss_pred CCCCCCCcccCCCCCCCCCccCCCchhHHHhhcCCceEecCCcchhhhccCCCccccccccCchhHHHHHhcCCceeecc
Q 043859 310 ETTGDGSFFTAGSGAGDDDLSSLLPDGFLSRTLDIGVVVPQWAPQIDILSHPSVGGFLSHCGWNSTLESITNGVPMIVWP 389 (484)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~ipq~~vL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~P 389 (484)
. . .....++ .|+.+.+|+|+.++|++++ ++|||||.||++|++++|+|+|++|
T Consensus 272 ~---------------~-~~~~~~~---------~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G~P~v~~p 324 (402)
T 3ia7_A 272 D---------------P-AVLGPLP---------PNVEAHQWIPFHSVLAHAR--ACLTHGTTGAVLEAFAAGVPLVLVP 324 (402)
T ss_dssp C---------------G-GGGCSCC---------TTEEEESCCCHHHHHTTEE--EEEECCCHHHHHHHHHTTCCEEECG
T ss_pred C---------------h-hhhCCCC---------CcEEEecCCCHHHHHhhCC--EEEECCCHHHHHHHHHhCCCEEEeC
Confidence 1 0 0112233 3899999999999999999 8999999999999999999999999
Q ss_pred c-ccccchhHHHHHhhhcceEEeeecCCCCccCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhhhcCCCChHHHHH
Q 043859 390 L-YSEQRMNATILTEELGVAIRSKVLPSKGVVGREEIKTMVRRILVDEEGYEIRAKVKELQRSAQKAWTRESGSSYSSLA 468 (484)
Q Consensus 390 ~-~~DQ~~na~rv~~~~G~g~~l~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~~~g~~~~~~~ 468 (484)
. ..||+.||.++ ++.|+|+.+.. +.++++.|.++|.++|+|++ ++++++++++.+. ...+..+.++
T Consensus 325 ~~~~~q~~~a~~~-~~~g~g~~~~~----~~~~~~~l~~~~~~ll~~~~---~~~~~~~~~~~~~-----~~~~~~~~~~ 391 (402)
T 3ia7_A 325 HFATEAAPSAERV-IELGLGSVLRP----DQLEPASIREAVERLAADSA---VRERVRRMQRDIL-----SSGGPARAAD 391 (402)
T ss_dssp GGCGGGHHHHHHH-HHTTSEEECCG----GGCSHHHHHHHHHHHHHCHH---HHHHHHHHHHHHH-----TSCHHHHHHH
T ss_pred CCcccHHHHHHHH-HHcCCEEEccC----CCCCHHHHHHHHHHHHcCHH---HHHHHHHHHHHHh-----hCChHHHHHH
Confidence 9 99999999999 69999999874 67899999999999999987 9999999988854 3344444544
Q ss_pred HHHHH
Q 043859 469 RLAKE 473 (484)
Q Consensus 469 ~~~~~ 473 (484)
.+.+.
T Consensus 392 ~i~~~ 396 (402)
T 3ia7_A 392 EVEAY 396 (402)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=6.4e-38 Score=317.67 Aligned_cols=359 Identities=13% Similarity=0.098 Sum_probs=229.4
Q ss_pred CCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCC-CCC-----
Q 043859 5 SSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDI-SGL----- 78 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~----- 78 (484)
...|||+|++.++.||++|+++||++|+++ ||+|+|++++.+.+ .++..+ +++..++.... .+.
T Consensus 18 ~~~mrIl~~~~~~~GHv~p~l~la~~L~~~-GheV~~~~~~~~~~-----~v~~~G----~~~~~i~~~~~~~~~~~~~~ 87 (441)
T 2yjn_A 18 GSHMRVVFSSMASKSHLFGLVPLAWAFRAA-GHEVRVVASPALTE-----DITAAG----LTAVPVGTDVDLVDFMTHAG 87 (441)
T ss_dssp -CCCEEEEECCSCHHHHTTTHHHHHHHHHT-TCEEEEEECGGGHH-----HHHTTT----CCEEECSCCCCHHHHHHHTT
T ss_pred CCccEEEEEcCCCcchHhHHHHHHHHHHHC-CCeEEEEeCchhHH-----HHHhCC----CceeecCCccchHHHhhhhh
Confidence 445899999999999999999999999999 99999999986543 344445 77777775310 000
Q ss_pred ---------CC-----CC---chHHHHHHHHHH---------H-hhHHHHHHHHhcCCCCeEEEeCCchhhHHHHHHHhC
Q 043859 79 ---------VD-----PD---AAVVTIISVIMR---------E-IKPAFRSAISALKTTPTALIVDLFGTESLAIAEELQ 131 (484)
Q Consensus 79 ---------~~-----~~---~~~~~~~~~~~~---------~-~~~~l~~~l~~~~~~pD~VI~D~~~~~~~~~A~~lg 131 (484)
.+ .. ............ . ....+.++++++ +||+||+|.+++++..+|+.+|
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pDlVv~d~~~~~~~~aA~~lg 165 (441)
T 2yjn_A 88 HDIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKW--RPDLVIWEPLTFAAPIAAAVTG 165 (441)
T ss_dssp HHHHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHH--CCSEEEECTTCTHHHHHHHHHT
T ss_pred cccccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhc--CCCEEEecCcchhHHHHHHHcC
Confidence 00 00 001101111111 1 445566677778 9999999998888889999999
Q ss_pred CCeEEEecccHHHHHHHHhhccccccccCccccCCccccCCCCCCCCcCCCCCccccCCchhHHHHHHhhhc-c-----c
Q 043859 132 IPKYVYVGTNAWCVALFVYAPTLDKTVQGQYVVQNESFNIPGCRPLRPEDVVDPMLDRTNQQYFEYVHIGEE-I-----P 205 (484)
Q Consensus 132 IP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~ 205 (484)
||++.+...+..........+..... .+.. .+.......+..+.+.... . .
T Consensus 166 iP~v~~~~~~~~~~~~~~~~~~~~~~-------------~~~~----------~~~~~~~~~l~~~~~~~g~~~~~~~~~ 222 (441)
T 2yjn_A 166 TPHARLLWGPDITTRARQNFLGLLPD-------------QPEE----------HREDPLAEWLTWTLEKYGGPAFDEEVV 222 (441)
T ss_dssp CCEEEECSSCCHHHHHHHHHHHHGGG-------------SCTT----------TCCCHHHHHHHHHHHHTTCCCCCGGGT
T ss_pred CCEEEEecCCCcchhhhhhhhhhccc-------------cccc----------cccchHHHHHHHHHHHcCCCCCCcccc
Confidence 99999865443221111111110000 0000 0000001111122211111 0 0
Q ss_pred CccEEEEcChhhhcHHHHHHHhhccccCCCCCCCeEEeccccCCCCCCCCccccccccCCCCCCeEEEEecCCCCCC---
Q 043859 206 LSDGILVNTWEDLQPTALTALRDDKSLGRITKVPIYTVGPIIRRLGPAGSWNELFDWLDKQPSESVLYVSFGSGGTL--- 282 (484)
Q Consensus 206 ~~~~~l~~~~~~l~~~~~~~~~~~~~~~rp~~p~~~~vGpl~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~--- 282 (484)
..+..+.++...++. +. .++. ..+++.... .+.++.+|++..+++++|||++||+...
T Consensus 223 ~~~~~l~~~~~~~~~------------~~-~~~~-~~~~~~~~~-----~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~ 283 (441)
T 2yjn_A 223 VGQWTIDPAPAAIRL------------DT-GLKT-VGMRYVDYN-----GPSVVPEWLHDEPERRRVCLTLGISSRENSI 283 (441)
T ss_dssp SCSSEEECSCGGGSC------------CC-CCCE-EECCCCCCC-----SSCCCCGGGSSCCSSCEEEEEC---------
T ss_pred CCCeEEEecCccccC------------CC-CCCC-CceeeeCCC-----CCcccchHhhcCCCCCEEEEECCCCcccccC
Confidence 012223322222211 00 1221 122222111 2345678988666778999999998653
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEEeCCCCCCCCCCcccCCCCCCCCCccCCCchhHHHhhcCCceEecCCcchhhhccCCC
Q 043859 283 TYEQITELAWGLELSQQRFIWVVRLPNETTGDGSFFTAGSGAGDDDLSSLLPDGFLSRTLDIGVVVPQWAPQIDILSHPS 362 (484)
Q Consensus 283 ~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~ipq~~vL~~~~ 362 (484)
..+.+..++++++..+.+++|+++..... ....+|+ |+.+.+|+||.++|++++
T Consensus 284 ~~~~~~~~~~al~~~~~~~v~~~g~~~~~-----------------~l~~~~~---------~v~~~~~~~~~~ll~~ad 337 (441)
T 2yjn_A 284 GQVSIEELLGAVGDVDAEIIATFDAQQLE-----------------GVANIPD---------NVRTVGFVPMHALLPTCA 337 (441)
T ss_dssp -CCSTTTTHHHHHTSSSEEEECCCTTTTS-----------------SCSSCCS---------SEEECCSCCHHHHGGGCS
T ss_pred hHHHHHHHHHHHHcCCCEEEEEECCcchh-----------------hhccCCC---------CEEEecCCCHHHHHhhCC
Confidence 23457788899988899999987532110 1112333 899999999999999999
Q ss_pred ccccccccCchhHHHHHhcCCceeecccccccchhHHHHHhhhcceEEeeecCCCCccCHHHHHHHHHHHhcccchHHHH
Q 043859 363 VGGFLSHCGWNSTLESITNGVPMIVWPLYSEQRMNATILTEELGVAIRSKVLPSKGVVGREEIKTMVRRILVDEEGYEIR 442 (484)
Q Consensus 363 ~~~~ItHgG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~g~~l~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~ 442 (484)
+||||||+||++|++++|||+|++|...||+.||.++ ++.|+|+.++. +.++++.|.++|.++|+|++ |+
T Consensus 338 --~~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l-~~~g~g~~~~~----~~~~~~~l~~~i~~ll~~~~---~~ 407 (441)
T 2yjn_A 338 --ATVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRT-QEFGAGIALPV----PELTPDQLRESVKRVLDDPA---HR 407 (441)
T ss_dssp --EEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHH-HHHTSEEECCT----TTCCHHHHHHHHHHHHHCHH---HH
T ss_pred --EEEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHH-HHcCCEEEccc----ccCCHHHHHHHHHHHhcCHH---HH
Confidence 8999999999999999999999999999999999999 69999999863 57899999999999999987 99
Q ss_pred HHHHHHHHHHH
Q 043859 443 AKVKELQRSAQ 453 (484)
Q Consensus 443 ~~a~~l~~~~~ 453 (484)
++++++++.+.
T Consensus 408 ~~~~~~~~~~~ 418 (441)
T 2yjn_A 408 AGAARMRDDML 418 (441)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998865
No 14
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=3.9e-36 Score=303.66 Aligned_cols=365 Identities=19% Similarity=0.188 Sum_probs=236.5
Q ss_pred CCCCCCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCCCCCCC
Q 043859 1 MESSSSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDISGLVD 80 (484)
Q Consensus 1 m~~~~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 80 (484)
|.+.|+.|||+|++.++.||++|++.||++|+++ ||+|++++++...+. +...+ ++++.++.........
T Consensus 1 M~~~m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~-G~~V~~~~~~~~~~~-----~~~~g----~~~~~~~~~~~~~~~~ 70 (430)
T 2iyf_A 1 MTTQTTPAHIAMFSIAAHGHVNPSLEVIRELVAR-GHRVTYAIPPVFADK-----VAATG----PRPVLYHSTLPGPDAD 70 (430)
T ss_dssp -------CEEEEECCSCHHHHGGGHHHHHHHHHT-TCEEEEEECGGGHHH-----HHTTS----CEEEECCCCSCCTTSC
T ss_pred CCCccccceEEEEeCCCCccccchHHHHHHHHHC-CCeEEEEeCHHHHHH-----HHhCC----CEEEEcCCcCcccccc
Confidence 7777777899999999999999999999999999 999999998865322 33344 7777777521101100
Q ss_pred -C--CchHHHH---HHHHHHHhhHHHHHHHHhcCCCCeEEEeCCchhhHHHHHHHhCCCeEEEecccHHH--HHHHHhhc
Q 043859 81 -P--DAAVVTI---ISVIMREIKPAFRSAISALKTTPTALIVDLFGTESLAIAEELQIPKYVYVGTNAWC--VALFVYAP 152 (484)
Q Consensus 81 -~--~~~~~~~---~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~--~~~~~~~p 152 (484)
. ....... +..........+.+++++. +||+||+|.+.+++..+|+.+|||++.+++.+... +......+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~ 148 (430)
T 2iyf_A 71 PEAWGSTLLDNVEPFLNDAIQALPQLADAYADD--IPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEP 148 (430)
T ss_dssp GGGGCSSHHHHHHHHHHHHHHHHHHHHHHHTTS--CCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHH
T ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHhhcc--CCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccccc
Confidence 0 0111111 1222233455667777777 99999999877788899999999999988654310 00000000
Q ss_pred cccccccCccccCCccccCCCCCCCCcCCCCCccccCCchhHHHHHHhhh-------cccCccEEEEcChhhhcHHHHHH
Q 043859 153 TLDKTVQGQYVVQNESFNIPGCRPLRPEDVVDPMLDRTNQQYFEYVHIGE-------EIPLSDGILVNTWEDLQPTALTA 225 (484)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~~~l~~~~~~~ 225 (484)
.. ... ...++.. .+ ......+..... .....+.+++++...++...
T Consensus 149 ~~-~~~----------~~~~~~~---------~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~--- 201 (430)
T 2iyf_A 149 MW-REP----------RQTERGR---------AY----YARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHA--- 201 (430)
T ss_dssp HH-HHH----------HHSHHHH---------HH----HHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTG---
T ss_pred hh-hhh----------ccchHHH---------HH----HHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCc---
Confidence 00 000 0000000 00 000111111100 00134567777776665420
Q ss_pred HhhccccCCCCCCC-eEEeccccCCCCCCCCccccccccCCCCCCeEEEEecCCCCCCCHHHHHHHHHHHhhC-CCcEEE
Q 043859 226 LRDDKSLGRITKVP-IYTVGPIIRRLGPAGSWNELFDWLDKQPSESVLYVSFGSGGTLTYEQITELAWGLELS-QQRFIW 303 (484)
Q Consensus 226 ~~~~~~~~rp~~p~-~~~vGpl~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~ 303 (484)
++..++ +++|||++.... +..+|....+++++||+++||......+.+..++++++.. +.+++|
T Consensus 202 --------~~~~~~~v~~vG~~~~~~~------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~ 267 (430)
T 2iyf_A 202 --------DRVDEDVYTFVGACQGDRA------EEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVL 267 (430)
T ss_dssp --------GGSCTTTEEECCCCC-----------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEE
T ss_pred --------ccCCCccEEEeCCcCCCCC------CCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEE
Confidence 011245 999998654311 1235665555678999999998754567788999999885 788888
Q ss_pred EEeCCCCCCCCCCcccCCCCCCCCCccCCCchhHHHhhcCCceEecCCcchhhhccCCCccccccccCchhHHHHHhcCC
Q 043859 304 VVRLPNETTGDGSFFTAGSGAGDDDLSSLLPDGFLSRTLDIGVVVPQWAPQIDILSHPSVGGFLSHCGWNSTLESITNGV 383 (484)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~ipq~~vL~~~~~~~~ItHgG~gs~~eal~~Gv 383 (484)
.++.... .+....++ +|+.+.+|+||.++|++++ +||||||+||++||+++|+
T Consensus 268 ~~G~~~~----------------~~~l~~~~---------~~v~~~~~~~~~~~l~~ad--~~v~~~G~~t~~Ea~~~G~ 320 (430)
T 2iyf_A 268 QIGRKVT----------------PAELGELP---------DNVEVHDWVPQLAILRQAD--LFVTHAGAGGSQEGLATAT 320 (430)
T ss_dssp ECC---C----------------GGGGCSCC---------TTEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHTTC
T ss_pred EeCCCCC----------------hHHhccCC---------CCeEEEecCCHHHHhhccC--EEEECCCccHHHHHHHhCC
Confidence 8743211 00011222 3899999999999999999 8999999999999999999
Q ss_pred ceeecccccccchhHHHHHhhhcceEEeeecCCCCccCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHH
Q 043859 384 PMIVWPLYSEQRMNATILTEELGVAIRSKVLPSKGVVGREEIKTMVRRILVDEEGYEIRAKVKELQRSAQ 453 (484)
Q Consensus 384 P~v~~P~~~DQ~~na~rv~~~~G~g~~l~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~ 453 (484)
|+|++|..+||..||.++ ++.|+|+.+.. +.++++.|.++|.++|+|++ ++++++++++.+.
T Consensus 321 P~i~~p~~~~q~~~a~~~-~~~g~g~~~~~----~~~~~~~l~~~i~~ll~~~~---~~~~~~~~~~~~~ 382 (430)
T 2iyf_A 321 PMIAVPQAVDQFGNADML-QGLGVARKLAT----EEATADLLRETALALVDDPE---VARRLRRIQAEMA 382 (430)
T ss_dssp CEEECCCSHHHHHHHHHH-HHTTSEEECCC----C-CCHHHHHHHHHHHHHCHH---HHHHHHHHHHHHH
T ss_pred CEEECCCccchHHHHHHH-HHcCCEEEcCC----CCCCHHHHHHHHHHHHcCHH---HHHHHHHHHHHHH
Confidence 999999999999999999 68999999863 56799999999999999877 8988888888755
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=1.9e-36 Score=301.29 Aligned_cols=337 Identities=15% Similarity=0.142 Sum_probs=233.5
Q ss_pred CeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCC-----------C
Q 043859 8 PHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDI-----------S 76 (484)
Q Consensus 8 ~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-----------~ 76 (484)
|||+|++.++.||++|+++||++|+++ ||+|++++++.+.+. ++..+ +.+..++.... .
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~-Gh~V~~~~~~~~~~~-----~~~~g----~~~~~~~~~~~~~~~~~~~~~~~ 70 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNA-GHQVVMAANQDMGPV-----VTGVG----LPAVATTDLPIRHFITTDREGRP 70 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEECGGGHHH-----HHHTT----CCEEESCSSCHHHHHHBCTTSCB
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHC-CCEEEEEeCHHHHHH-----HHhCC----CEEEEeCCcchHHHHhhhcccCc
Confidence 799999999999999999999999999 999999998864322 33344 66666664210 0
Q ss_pred CCCCCCchHHHHH-----HHHHHHhhHHHHHHHHhcCCCCeEEEeCCchhhHHHHHHHhCCCeEEEecccHHHHHHHHhh
Q 043859 77 GLVDPDAAVVTII-----SVIMREIKPAFRSAISALKTTPTALIVDLFGTESLAIAEELQIPKYVYVGTNAWCVALFVYA 151 (484)
Q Consensus 77 ~~~~~~~~~~~~~-----~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~ 151 (484)
............+ ..........+.+++++. +||+||+|.+.+++..+|+.+|||++.+...+..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~-------- 140 (384)
T 2p6p_A 71 EAIPSDPVAQARFTGRWFARMAASSLPRMLDFSRAW--RPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD-------- 140 (384)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC--------
T ss_pred cccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhcc--CCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc--------
Confidence 0001110111111 112233456677778888 9999999988788888999999999987532210
Q ss_pred ccccccccCccccCCccccCCCCCCCCcCCCCCccccCCchhHHHHHHhhhc--ccCccEEEEcChhhhcHHHHHHHhhc
Q 043859 152 PTLDKTVQGQYVVQNESFNIPGCRPLRPEDVVDPMLDRTNQQYFEYVHIGEE--IPLSDGILVNTWEDLQPTALTALRDD 229 (484)
Q Consensus 152 p~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~l~~~~~~~~~~~ 229 (484)
.. + +..........+...... ....+.+++++...++..
T Consensus 141 ---~~----------------~------------~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~-------- 181 (384)
T 2p6p_A 141 ---AD----------------G------------IHPGADAELRPELSELGLERLPAPDLFIDICPPSLRPA-------- 181 (384)
T ss_dssp ---CT----------------T------------THHHHHHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCT--------
T ss_pred ---cc----------------h------------hhHHHHHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCC--------
Confidence 00 0 000000011111111110 111456677776665532
Q ss_pred cccCCCCCC--CeEEeccccCCCCCCCCccccccccCCCCCCeEEEEecCCCCCC-----CHHHHHHHHHHHhhCCCcEE
Q 043859 230 KSLGRITKV--PIYTVGPIIRRLGPAGSWNELFDWLDKQPSESVLYVSFGSGGTL-----TYEQITELAWGLELSQQRFI 302 (484)
Q Consensus 230 ~~~~rp~~p--~~~~vGpl~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~-----~~~~~~~~~~al~~~~~~~i 302 (484)
++ ++ ++.+++. . .+.++.+|++..+++++|||++||+... ..+.+..++++++..+.+++
T Consensus 182 ----~~-~~~~~~~~~~~---~-----~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~ 248 (384)
T 2p6p_A 182 ----NA-APARMMRHVAT---S-----RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELI 248 (384)
T ss_dssp ----TS-CCCEECCCCCC---C-----CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEE
T ss_pred ----CC-CCCCceEecCC---C-----CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEE
Confidence 11 22 1334421 1 1245667887655668999999998754 34678889999998899999
Q ss_pred EEEeCCCCCCCCCCcccCCCCCCCCCccCCCchhHHHhhcCCceEecCCcchhhhccCCCccccccccCchhHHHHHhcC
Q 043859 303 WVVRLPNETTGDGSFFTAGSGAGDDDLSSLLPDGFLSRTLDIGVVVPQWAPQIDILSHPSVGGFLSHCGWNSTLESITNG 382 (484)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~ipq~~vL~~~~~~~~ItHgG~gs~~eal~~G 382 (484)
|+++.. ..+.+. .. .+|+.+ +|+||.++|++++ +||||||+||++||+++|
T Consensus 249 ~~~g~~------------------------~~~~l~-~~-~~~v~~-~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~~G 299 (384)
T 2p6p_A 249 VAAPDT------------------------VAEALR-AE-VPQARV-GWTPLDVVAPTCD--LLVHHAGGVSTLTGLSAG 299 (384)
T ss_dssp EECCHH------------------------HHHHHH-HH-CTTSEE-ECCCHHHHGGGCS--EEEECSCTTHHHHHHHTT
T ss_pred EEeCCC------------------------CHHhhC-CC-CCceEE-cCCCHHHHHhhCC--EEEeCCcHHHHHHHHHhC
Confidence 987321 001111 11 348999 9999999999999 899999999999999999
Q ss_pred CceeecccccccchhHHHHHhhhcceEEeeecCCCCccCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHH
Q 043859 383 VPMIVWPLYSEQRMNATILTEELGVAIRSKVLPSKGVVGREEIKTMVRRILVDEEGYEIRAKVKELQRSAQ 453 (484)
Q Consensus 383 vP~v~~P~~~DQ~~na~rv~~~~G~g~~l~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~ 453 (484)
+|+|++|...||+.||.++ ++.|+|+.+.. +.+++++|.++|.++|+|++ ++++++++++.++
T Consensus 300 ~P~v~~p~~~dq~~~a~~~-~~~g~g~~~~~----~~~~~~~l~~~i~~ll~~~~---~~~~~~~~~~~~~ 362 (384)
T 2p6p_A 300 VPQLLIPKGSVLEAPARRV-ADYGAAIALLP----GEDSTEAIADSCQELQAKDT---YARRAQDLSREIS 362 (384)
T ss_dssp CCEEECCCSHHHHHHHHHH-HHHTSEEECCT----TCCCHHHHHHHHHHHHHCHH---HHHHHHHHHHHHH
T ss_pred CCEEEccCcccchHHHHHH-HHCCCeEecCc----CCCCHHHHHHHHHHHHcCHH---HHHHHHHHHHHHH
Confidence 9999999999999999999 69999999863 56899999999999999987 9999999999865
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=8.1e-36 Score=298.24 Aligned_cols=345 Identities=14% Similarity=0.118 Sum_probs=216.1
Q ss_pred CCCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCC---------
Q 043859 4 SSSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPD--------- 74 (484)
Q Consensus 4 ~~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--------- 74 (484)
+..+|||+|++.++.||++|++.|+++|+++ ||+|++++++.+.+.+ +..+ +.+..++...
T Consensus 12 ~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~-GheV~v~~~~~~~~~~-----~~~G----~~~~~~~~~~~~~~~~~~~ 81 (398)
T 4fzr_A 12 RGSHMRILVIAGCSEGFVMPLVPLSWALRAA-GHEVLVAASENMGPTV-----TGAG----LPFAPTCPSLDMPEVLSWD 81 (398)
T ss_dssp ---CCEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEEEGGGHHHH-----HHTT----CCEEEEESSCCHHHHHSBC
T ss_pred CCCceEEEEEcCCCcchHHHHHHHHHHHHHC-CCEEEEEcCHHHHHHH-----HhCC----CeeEecCCccchHhhhhhh
Confidence 4567999999999999999999999999999 9999999987655443 3333 4455554210
Q ss_pred ---CCCCCCCCc-hH----HHHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCchhhHHHHHHHhCCCeEEEecccHHHHH
Q 043859 75 ---ISGLVDPDA-AV----VTIISVIMREIKPAFRSAISALKTTPTALIVDLFGTESLAIAEELQIPKYVYVGTNAWCVA 146 (484)
Q Consensus 75 ---~~~~~~~~~-~~----~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~ 146 (484)
....++... .. ...+..........+.++++++ +||+||+|...+++..+|+.+|||++.+.........
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~ 159 (398)
T 4fzr_A 82 REGNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERW--KPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPEL 159 (398)
T ss_dssp TTSCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHH
T ss_pred ccCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchh
Confidence 000001111 11 1112233344556778888888 9999999988888889999999999987654311100
Q ss_pred HHHhhccccccccCccccCCccccCCCCCCCCcCCCCCccccCCchhHHHHHHhhh--cccCccEEEEcChhhhcHHHHH
Q 043859 147 LFVYAPTLDKTVQGQYVVQNESFNIPGCRPLRPEDVVDPMLDRTNQQYFEYVHIGE--EIPLSDGILVNTWEDLQPTALT 224 (484)
Q Consensus 147 ~~~~~p~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~l~~~~~~ 224 (484)
.... ....+........ .....+..+......+....
T Consensus 160 ~~~~---------------------------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 198 (398)
T 4fzr_A 160 IKSA---------------------------------------GVGELAPELAELGLTDFPDPLLSIDVCPPSMEAQP-- 198 (398)
T ss_dssp HHHH---------------------------------------HHHHTHHHHHTTTCSSCCCCSEEEECSCGGGC-----
T ss_pred hhHH---------------------------------------HHHHHHHHHHHcCCCCCCCCCeEEEeCChhhCCCC--
Confidence 0000 0000011111100 01111223332323232210
Q ss_pred HHhhccccCCCCCCCeEEeccccCCCCCCCCccccccccCCCCCCeEEEEecCCCCCC--------CHHHHHHHHHHHhh
Q 043859 225 ALRDDKSLGRITKVPIYTVGPIIRRLGPAGSWNELFDWLDKQPSESVLYVSFGSGGTL--------TYEQITELAWGLEL 296 (484)
Q Consensus 225 ~~~~~~~~~rp~~p~~~~vGpl~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~--------~~~~~~~~~~al~~ 296 (484)
. .+ ..++.++++. ....++.+|+...+++++|||++||.... ..+.+..++++++.
T Consensus 199 ---~-----~~-~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~ 262 (398)
T 4fzr_A 199 ---K-----PG-TTKMRYVPYN-------GRNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPK 262 (398)
T ss_dssp ---------CC-CEECCCCCCC-------CSSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGG
T ss_pred ---C-----CC-CCCeeeeCCC-------CCCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHh
Confidence 0 00 0012222211 02345566766555678999999998533 23458889999988
Q ss_pred CCCcEEEEEeCCCCCCCCCCcccCCCCCCCCCccCCCchhHHHhhcCCceEecCCcchhhhccCCCccccccccCchhHH
Q 043859 297 SQQRFIWVVRLPNETTGDGSFFTAGSGAGDDDLSSLLPDGFLSRTLDIGVVVPQWAPQIDILSHPSVGGFLSHCGWNSTL 376 (484)
Q Consensus 297 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~ipq~~vL~~~~~~~~ItHgG~gs~~ 376 (484)
.+.+++|+.++.... ....+| +|+.+.+|+|+.++|++++ +||||||.||++
T Consensus 263 ~~~~~v~~~~~~~~~-----------------~l~~~~---------~~v~~~~~~~~~~ll~~ad--~~v~~gG~~t~~ 314 (398)
T 4fzr_A 263 LGFEVVVAVSDKLAQ-----------------TLQPLP---------EGVLAAGQFPLSAIMPACD--VVVHHGGHGTTL 314 (398)
T ss_dssp GTCEEEECCCC-------------------------CC---------TTEEEESCCCHHHHGGGCS--EEEECCCHHHHH
T ss_pred CCCEEEEEeCCcchh-----------------hhccCC---------CcEEEeCcCCHHHHHhhCC--EEEecCCHHHHH
Confidence 899999987432110 112233 3899999999999999999 899999999999
Q ss_pred HHHhcCCceeecccccccchhHHHHHhhhcceEEeeecCCCCccCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHH
Q 043859 377 ESITNGVPMIVWPLYSEQRMNATILTEELGVAIRSKVLPSKGVVGREEIKTMVRRILVDEEGYEIRAKVKELQRSAQ 453 (484)
Q Consensus 377 eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~g~~l~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~ 453 (484)
||+++|+|+|++|...||+.||.++ ++.|+|+.++. ..++++.|.++|.++|+|++ ++++++++++.+.
T Consensus 315 Ea~~~G~P~v~~p~~~~q~~~a~~~-~~~g~g~~~~~----~~~~~~~l~~ai~~ll~~~~---~~~~~~~~~~~~~ 383 (398)
T 4fzr_A 315 TCLSEGVPQVSVPVIAEVWDSARLL-HAAGAGVEVPW----EQAGVESVLAACARIRDDSS---YVGNARRLAAEMA 383 (398)
T ss_dssp HHHHTTCCEEECCCSGGGHHHHHHH-HHTTSEEECC-----------CHHHHHHHHHHCTH---HHHHHHHHHHHHT
T ss_pred HHHHhCCCEEecCCchhHHHHHHHH-HHcCCEEecCc----ccCCHHHHHHHHHHHHhCHH---HHHHHHHHHHHHH
Confidence 9999999999999999999999999 69999999874 67799999999999999988 9999999988843
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=1.8e-34 Score=288.42 Aligned_cols=338 Identities=16% Similarity=0.194 Sum_probs=226.8
Q ss_pred CCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCC-C-------
Q 043859 5 SSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDI-S------- 76 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~------- 76 (484)
.+.|||+|++.++.||++|++.||++|+++ ||+|+++++ .+.+. ++..+ +.+..++.... .
T Consensus 18 ~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~-GheV~v~~~-~~~~~-----~~~~G----~~~~~~~~~~~~~~~~~~~~ 86 (398)
T 3oti_A 18 GRHMRVLFVSSPGIGHLFPLIQLAWGFRTA-GHDVLIAVA-EHADR-----AAAAG----LEVVDVAPDYSAVKVFEQVA 86 (398)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEES-SCHHH-----HHTTT----CEEEESSTTCCHHHHHHHHH
T ss_pred hhcCEEEEEcCCCcchHhHHHHHHHHHHHC-CCEEEEecc-chHHH-----HHhCC----CeeEecCCccCHHHHhhhcc
Confidence 446999999999999999999999999999 999999999 55433 34455 77777774210 0
Q ss_pred ------------CCCCCCchHHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCchhhHHHHHHHhCCCeEEEecccHHH
Q 043859 77 ------------GLVDPDAAVVTIISVIMREIKPAFRSAISALKTTPTALIVDLFGTESLAIAEELQIPKYVYVGTNAWC 144 (484)
Q Consensus 77 ------------~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~ 144 (484)
............+..........+.++++++ +||+||+|...+++..+|+.+|||++.+.......
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~ 164 (398)
T 3oti_A 87 KDNPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDY--RPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRT 164 (398)
T ss_dssp HHCHHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCC
T ss_pred cCCccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHc--CCCEEEECchhhHHHHHHHHcCCCEEEEeccCCCc
Confidence 0001111122223334445567888889999 99999999888888899999999998765321100
Q ss_pred HHHHHhhccccccccCccccCCccccCCCCCCCCcCCCCCccccCCchhHHHHHHhhh-cccCccEEEEcChhhhcHHHH
Q 043859 145 VALFVYAPTLDKTVQGQYVVQNESFNIPGCRPLRPEDVVDPMLDRTNQQYFEYVHIGE-EIPLSDGILVNTWEDLQPTAL 223 (484)
Q Consensus 145 ~~~~~~~p~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~l~~~~~ 223 (484)
.. ................. ........+......+...
T Consensus 165 ~~---------------------------------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 203 (398)
T 3oti_A 165 RG---------------------------------------MHRSIASFLTDLMDKHQVSLPEPVATIESFPPSLLLE-- 203 (398)
T ss_dssp TT---------------------------------------HHHHHHTTCHHHHHHTTCCCCCCSEEECSSCGGGGTT--
T ss_pred cc---------------------------------------hhhHHHHHHHHHHHHcCCCCCCCCeEEEeCCHHHCCC--
Confidence 00 00000000111111111 1111122222222222110
Q ss_pred HHHhhccccCCCCCCCeEEeccccCCCCCCCCccccccccCCCCCCeEEEEecCCCCCC--CHHHHHHHHHHHhhCCCcE
Q 043859 224 TALRDDKSLGRITKVPIYTVGPIIRRLGPAGSWNELFDWLDKQPSESVLYVSFGSGGTL--TYEQITELAWGLELSQQRF 301 (484)
Q Consensus 224 ~~~~~~~~~~rp~~p~~~~vGpl~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~--~~~~~~~~~~al~~~~~~~ 301 (484)
...+.+ ++.++ |. ..+....+|+...+++++|||++||.... ..+.+..++++++..+.++
T Consensus 204 --------~~~~~~-~~~~~-~~-------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~ 266 (398)
T 3oti_A 204 --------AEPEGW-FMRWV-PY-------GGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADF 266 (398)
T ss_dssp --------SCCCSB-CCCCC-CC-------CCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEE
T ss_pred --------CCCCCC-Ccccc-CC-------CCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEE
Confidence 000001 11221 10 12345567877666778999999998432 4466888999998889999
Q ss_pred EEEEeCCCCCCCCCCcccCCCCCCCCCccCCCchhHHHhhcCCceEecCCcchhhhccCCCccccccccCchhHHHHHhc
Q 043859 302 IWVVRLPNETTGDGSFFTAGSGAGDDDLSSLLPDGFLSRTLDIGVVVPQWAPQIDILSHPSVGGFLSHCGWNSTLESITN 381 (484)
Q Consensus 302 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~ipq~~vL~~~~~~~~ItHgG~gs~~eal~~ 381 (484)
+|+.++... .....+|+ |+.+.+|+|+.++|++++ +||||||.||++||+++
T Consensus 267 v~~~g~~~~-----------------~~l~~~~~---------~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Eal~~ 318 (398)
T 3oti_A 267 VLALGDLDI-----------------SPLGTLPR---------NVRAVGWTPLHTLLRTCT--AVVHHGGGGTVMTAIDA 318 (398)
T ss_dssp EEECTTSCC-----------------GGGCSCCT---------TEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHH
T ss_pred EEEECCcCh-----------------hhhccCCC---------cEEEEccCCHHHHHhhCC--EEEECCCHHHHHHHHHh
Confidence 998744311 01222333 899999999999999999 89999999999999999
Q ss_pred CCceeecccccccchhH--HHHHhhhcceEEeeecCCCCccCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHH
Q 043859 382 GVPMIVWPLYSEQRMNA--TILTEELGVAIRSKVLPSKGVVGREEIKTMVRRILVDEEGYEIRAKVKELQRSAQ 453 (484)
Q Consensus 382 GvP~v~~P~~~DQ~~na--~rv~~~~G~g~~l~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~ 453 (484)
|+|+|++|...||..|| .++ ++.|+|+.++. ...+++.|. ++|+|++ |+++++++++.+.
T Consensus 319 G~P~v~~p~~~dq~~~a~~~~~-~~~g~g~~~~~----~~~~~~~l~----~ll~~~~---~~~~~~~~~~~~~ 380 (398)
T 3oti_A 319 GIPQLLAPDPRDQFQHTAREAV-SRRGIGLVSTS----DKVDADLLR----RLIGDES---LRTAAREVREEMV 380 (398)
T ss_dssp TCCEEECCCTTCCSSCTTHHHH-HHHTSEEECCG----GGCCHHHHH----HHHHCHH---HHHHHHHHHHHHH
T ss_pred CCCEEEcCCCchhHHHHHHHHH-HHCCCEEeeCC----CCCCHHHHH----HHHcCHH---HHHHHHHHHHHHH
Confidence 99999999999999999 999 69999999874 566777777 8888887 9999999999854
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=7.3e-34 Score=283.36 Aligned_cols=340 Identities=15% Similarity=0.112 Sum_probs=223.2
Q ss_pred CCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhhccCCCceEEEec-CCCC-CC----CCCC
Q 043859 7 KPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEI-PAPD-IS----GLVD 80 (484)
Q Consensus 7 ~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~-~~----~~~~ 80 (484)
+|||+|++.++.||++|++.|+++|+++ ||+|++++++.+.+. +...+ +.+..+ +... .. ....
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~-GheV~v~~~~~~~~~-----~~~~g----~~~~~~~~~~~~~~~~~~~~~~ 70 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQAS-GHEVLIAAPPELQAT-----AHGAG----LTTAGIRGNDRTGDTGGTTQLR 70 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHT-TCEEEEEECHHHHHH-----HHHBT----CEEEEC--------------CC
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHC-CCEEEEecChhhHHH-----HHhCC----CceeeecCCccchhhhhhhccc
Confidence 5999999999999999999999999999 999999998654333 33344 555555 2110 00 0000
Q ss_pred --------CC-chHHHHHHHHHHHh-------hHHHHHHHHhcCCCCeEEEeCCchhhHHHHHHHhCCCeEEEecccHHH
Q 043859 81 --------PD-AAVVTIISVIMREI-------KPAFRSAISALKTTPTALIVDLFGTESLAIAEELQIPKYVYVGTNAWC 144 (484)
Q Consensus 81 --------~~-~~~~~~~~~~~~~~-------~~~l~~~l~~~~~~pD~VI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~ 144 (484)
.. ......+....... ...+.++++++ +||+||+|...+++..+|+.+|||++.+.......
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~ 148 (391)
T 3tsa_A 71 FPNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAW--RPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPT 148 (391)
T ss_dssp SCCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCT
T ss_pred ccccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhc--CCCEEEeCcchhHHHHHHHHhCCCEEEEecCCccc
Confidence 00 11112222222333 66778888889 99999999878878889999999998875432100
Q ss_pred HHHHHhhccccccccCccccCCccccCCCCCCCCcCCCCCccccCCchhHHHHHHhhhcc-----cCccEEEEcChhhhc
Q 043859 145 VALFVYAPTLDKTVQGQYVVQNESFNIPGCRPLRPEDVVDPMLDRTNQQYFEYVHIGEEI-----PLSDGILVNTWEDLQ 219 (484)
Q Consensus 145 ~~~~~~~p~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~l~ 219 (484)
.. ........+.......+ ...+..+.....+++
T Consensus 149 ~~-----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (391)
T 3tsa_A 149 AG-----------------------------------------PFSDRAHELLDPVCRHHGLTGLPTPELILDPCPPSLQ 187 (391)
T ss_dssp TT-----------------------------------------HHHHHHHHHHHHHHHHTTSSSSCCCSEEEECSCGGGS
T ss_pred cc-----------------------------------------cccchHHHHHHHHHHHcCCCCCCCCceEEEecChhhc
Confidence 00 00000111111111111 111333333333222
Q ss_pred HHHHHHHhhccccCCCCCCCeEEeccccCCCCCCCCccccccccCCCCCCeEEEEecCCCCC---CCHHHHHHHHHHHhh
Q 043859 220 PTALTALRDDKSLGRITKVPIYTVGPIIRRLGPAGSWNELFDWLDKQPSESVLYVSFGSGGT---LTYEQITELAWGLEL 296 (484)
Q Consensus 220 ~~~~~~~~~~~~~~rp~~p~~~~vGpl~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~---~~~~~~~~~~~al~~ 296 (484)
.. .... ..++.|+ |. ........|+...+++++||+++||... ...+.+..++++ +.
T Consensus 188 ~~----------~~~~-~~~~~~~-p~-------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~ 247 (391)
T 3tsa_A 188 AS----------DAPQ-GAPVQYV-PY-------NGSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TE 247 (391)
T ss_dssp CT----------TSCC-CEECCCC-CC-------CCCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HT
T ss_pred CC----------CCCc-cCCeeee-cC-------CCCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-cc
Confidence 11 0000 0012233 11 1223455787766677899999999732 226678888888 77
Q ss_pred C-CCcEEEEEeCCCCCCCCCCcccCCCCCCCCCccCCCchhHHHhhcCCceEecCCcchhhhccCCCccccccccCchhH
Q 043859 297 S-QQRFIWVVRLPNETTGDGSFFTAGSGAGDDDLSSLLPDGFLSRTLDIGVVVPQWAPQIDILSHPSVGGFLSHCGWNST 375 (484)
Q Consensus 297 ~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~ipq~~vL~~~~~~~~ItHgG~gs~ 375 (484)
. +.+++|+.++... .....++ .|+.+.+|+|+.++|++++ +||||||.||+
T Consensus 248 ~p~~~~v~~~~~~~~-----------------~~l~~~~---------~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~ 299 (391)
T 3tsa_A 248 LPGVEAVIAVPPEHR-----------------ALLTDLP---------DNARIAESVPLNLFLRTCE--LVICAGGSGTA 299 (391)
T ss_dssp STTEEEEEECCGGGG-----------------GGCTTCC---------TTEEECCSCCGGGTGGGCS--EEEECCCHHHH
T ss_pred CCCeEEEEEECCcch-----------------hhcccCC---------CCEEEeccCCHHHHHhhCC--EEEeCCCHHHH
Confidence 7 7888888643211 0111222 3899999999999999999 89999999999
Q ss_pred HHHHhcCCceeecccccccchhHHHHHhhhcceEEeeecCCCCccCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHH
Q 043859 376 LESITNGVPMIVWPLYSEQRMNATILTEELGVAIRSKVLPSKGVVGREEIKTMVRRILVDEEGYEIRAKVKELQRSAQ 453 (484)
Q Consensus 376 ~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~g~~l~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~ 453 (484)
+||+++|+|+|++|...||+.|+.++ ++.|+|+.+... ....+++.|.++|.++|+|++ ++++++++++.+.
T Consensus 300 ~Ea~~~G~P~v~~p~~~~q~~~a~~~-~~~g~g~~~~~~--~~~~~~~~l~~ai~~ll~~~~---~~~~~~~~~~~~~ 371 (391)
T 3tsa_A 300 FTATRLGIPQLVLPQYFDQFDYARNL-AAAGAGICLPDE--QAQSDHEQFTDSIATVLGDTG---FAAAAIKLSDEIT 371 (391)
T ss_dssp HHHHHTTCCEEECCCSTTHHHHHHHH-HHTTSEEECCSH--HHHTCHHHHHHHHHHHHTCTH---HHHHHHHHHHHHH
T ss_pred HHHHHhCCCEEecCCcccHHHHHHHH-HHcCCEEecCcc--cccCCHHHHHHHHHHHHcCHH---HHHHHHHHHHHHH
Confidence 99999999999999999999999999 699999998510 023789999999999999988 9999998888854
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=2.5e-31 Score=266.74 Aligned_cols=362 Identities=14% Similarity=0.164 Sum_probs=237.5
Q ss_pred CCCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCC----------
Q 043859 4 SSSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAP---------- 73 (484)
Q Consensus 4 ~~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---------- 73 (484)
+..+|||+|++.++.||++|++.||++|+++ ||+|++++++.+. ..++..+ +.+..++..
T Consensus 17 ~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~-GheV~v~~~~~~~-----~~~~~~g----~~~~~~~~~~~~~~~~~~~ 86 (412)
T 3otg_A 17 EGRHMRVLFASLGTHGHTYPLLPLATAARAA-GHEVTFATGEGFA-----GTLRKLG----FEPVATGMPVFDGFLAALR 86 (412)
T ss_dssp -CCSCEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEECGGGH-----HHHHHTT----CEEEECCCCHHHHHHHHHH
T ss_pred ccceeEEEEEcCCCcccHHHHHHHHHHHHHC-CCEEEEEccHHHH-----HHHHhcC----CceeecCcccccchhhhhh
Confidence 3567999999999999999999999999999 9999999987543 2334445 777777630
Q ss_pred ---CCCCCCCC------CchHHHHHHHH-HHHhhHHHHHHHHhcCCCCeEEEeCCchhhHHHHHHHhCCCeEEEecccHH
Q 043859 74 ---DISGLVDP------DAAVVTIISVI-MREIKPAFRSAISALKTTPTALIVDLFGTESLAIAEELQIPKYVYVGTNAW 143 (484)
Q Consensus 74 ---~~~~~~~~------~~~~~~~~~~~-~~~~~~~l~~~l~~~~~~pD~VI~D~~~~~~~~~A~~lgIP~v~~~~~~~~ 143 (484)
..... +. .......+... .......+.++++++ +||+||+|...+++..+|+.+|||+|.+......
T Consensus 87 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~ 163 (412)
T 3otg_A 87 IRFDTDSP-EGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERL--RPDLVVQEISNYGAGLAALKAGIPTICHGVGRDT 163 (412)
T ss_dssp HHHSCSCC-TTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCC
T ss_pred hhhcccCC-ccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhc--CCCEEEECchhhHHHHHHHHcCCCEEEecccccC
Confidence 00000 00 00111112222 333456788888999 9999999987777888999999998876543210
Q ss_pred HHHHHHhhccccccccCccccCCccccCCCCCCCCcCCCCCccccCCchhHHHHHHhhhc-------ccCccEEEEcChh
Q 043859 144 CVALFVYAPTLDKTVQGQYVVQNESFNIPGCRPLRPEDVVDPMLDRTNQQYFEYVHIGEE-------IPLSDGILVNTWE 216 (484)
Q Consensus 144 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~~~~ 216 (484)
..... ......+..+...... ....+.++..+..
T Consensus 164 ~~~~~---------------------------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~ 204 (412)
T 3otg_A 164 PDDLT---------------------------------------RSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPP 204 (412)
T ss_dssp CSHHH---------------------------------------HHHHHHHHHHHHHTTCCCCSSCCGGGGCCEEECSCG
T ss_pred chhhh---------------------------------------HHHHHHHHHHHHHcCCCCCcccccCCCCeEEeeCCH
Confidence 00000 0000001111111000 1223344444444
Q ss_pred hhcHHHHHHHhhccccCCCCCCCeEEeccccCCCCCCCCccccccc-cCCCCCCeEEEEecCCCCCCCHHHHHHHHHHHh
Q 043859 217 DLQPTALTALRDDKSLGRITKVPIYTVGPIIRRLGPAGSWNELFDW-LDKQPSESVLYVSFGSGGTLTYEQITELAWGLE 295 (484)
Q Consensus 217 ~l~~~~~~~~~~~~~~~rp~~p~~~~vGpl~~~~~~~~~~~~~~~~-l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~ 295 (484)
.++.... .. ......+-+... .......+| ....+++++||+++||......+.+..++++++
T Consensus 205 ~~~~~~~----~~-------~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~l~ 268 (412)
T 3otg_A 205 SLQEPEF----RA-------RPRRHELRPVPF-----AEQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGLA 268 (412)
T ss_dssp GGSCHHH----HT-------CTTEEECCCCCC-----CCCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHHHH
T ss_pred HhcCCcc----cC-------CCCcceeeccCC-----CCCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHHHH
Confidence 3332200 00 001111111100 112334556 233346779999999987556677899999998
Q ss_pred hCCCcEEEEEeCCCCCCCCCCcccCCCCCCCCCccCCCchhHHHhhcCCceEecCCcchhhhccCCCccccccccCchhH
Q 043859 296 LSQQRFIWVVRLPNETTGDGSFFTAGSGAGDDDLSSLLPDGFLSRTLDIGVVVPQWAPQIDILSHPSVGGFLSHCGWNST 375 (484)
Q Consensus 296 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~ipq~~vL~~~~~~~~ItHgG~gs~ 375 (484)
..+.+++|+++..... .....+++ |+.+.+|+|+.++|++++ +||+|||.||+
T Consensus 269 ~~~~~~~~~~g~~~~~----------------~~l~~~~~---------~v~~~~~~~~~~~l~~ad--~~v~~~g~~t~ 321 (412)
T 3otg_A 269 GLDADVLVASGPSLDV----------------SGLGEVPA---------NVRLESWVPQAALLPHVD--LVVHHGGSGTT 321 (412)
T ss_dssp TSSSEEEEECCSSCCC----------------TTCCCCCT---------TEEEESCCCHHHHGGGCS--EEEESCCHHHH
T ss_pred cCCCEEEEEECCCCCh----------------hhhccCCC---------cEEEeCCCCHHHHHhcCc--EEEECCchHHH
Confidence 8899999987543210 01122333 899999999999999999 89999999999
Q ss_pred HHHHhcCCceeecccccccchhHHHHHhhhcceEEeeecCCCCccCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHh
Q 043859 376 LESITNGVPMIVWPLYSEQRMNATILTEELGVAIRSKVLPSKGVVGREEIKTMVRRILVDEEGYEIRAKVKELQRSAQKA 455 (484)
Q Consensus 376 ~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~g~~l~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a 455 (484)
+||+++|+|+|++|...||..|+.++ ++.|+|+.+.. ..++++.|.++|.++|+|++ +++++.+.++...
T Consensus 322 ~Ea~a~G~P~v~~p~~~~q~~~~~~v-~~~g~g~~~~~----~~~~~~~l~~ai~~ll~~~~---~~~~~~~~~~~~~-- 391 (412)
T 3otg_A 322 LGALGAGVPQLSFPWAGDSFANAQAV-AQAGAGDHLLP----DNISPDSVSGAAKRLLAEES---YRAGARAVAAEIA-- 391 (412)
T ss_dssp HHHHHHTCCEEECCCSTTHHHHHHHH-HHHTSEEECCG----GGCCHHHHHHHHHHHHHCHH---HHHHHHHHHHHHH--
T ss_pred HHHHHhCCCEEecCCchhHHHHHHHH-HHcCCEEecCc----ccCCHHHHHHHHHHHHhCHH---HHHHHHHHHHHHh--
Confidence 99999999999999999999999999 69999999874 56799999999999999987 8988888877754
Q ss_pred hhcCCCChHHHHHHHHHH
Q 043859 456 WTRESGSSYSSLARLAKE 473 (484)
Q Consensus 456 ~~~~~g~~~~~~~~~~~~ 473 (484)
.. .+..+.++.+.+-
T Consensus 392 --~~-~~~~~~~~~~~~l 406 (412)
T 3otg_A 392 --AM-PGPDEVVRLLPGF 406 (412)
T ss_dssp --HS-CCHHHHHTTHHHH
T ss_pred --cC-CCHHHHHHHHHHH
Confidence 22 3454444444443
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.97 E-value=3.6e-29 Score=246.39 Aligned_cols=311 Identities=16% Similarity=0.110 Sum_probs=198.3
Q ss_pred CeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCCCCCCCCCchHHH
Q 043859 8 PHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDISGLVDPDAAVVT 87 (484)
Q Consensus 8 ~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 87 (484)
.||+|...++-||++|.++||++|+++ ||+|+|++++... +..+++..+ +.++.++...+... ...+...
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~-g~~V~~vg~~~g~---e~~~v~~~g----~~~~~i~~~~~~~~--~~~~~~~ 72 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQAR-GYAVHWLGTPRGI---ENDLVPKAG----LPLHLIQVSGLRGK--GLKSLVK 72 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEECSSST---HHHHTGGGT----CCEEECC----------------
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhC-CCEEEEEECCchH---hhchhhhcC----CcEEEEECCCcCCC--CHHHHHH
Confidence 599999988889999999999999999 9999999987543 345667666 77777775333221 0111111
Q ss_pred HHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCchhh--HHHHHHHhCCCeEEEecccHHHHHHHHhhccccccccCccccC
Q 043859 88 IISVIMREIKPAFRSAISALKTTPTALIVDLFGTE--SLAIAEELQIPKYVYVGTNAWCVALFVYAPTLDKTVQGQYVVQ 165 (484)
Q Consensus 88 ~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~~~~--~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 165 (484)
....... .......+++++ +||+||++..+.+ +..+|+.+|||+++... +.
T Consensus 73 ~~~~~~~-~~~~~~~~l~~~--~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~-n~----------------------- 125 (365)
T 3s2u_A 73 APLELLK-SLFQALRVIRQL--RPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQ-NA----------------------- 125 (365)
T ss_dssp CHHHHHH-HHHHHHHHHHHH--CCSEEEECSSSTHHHHHHHHHHTTCCEEEEEC-SS-----------------------
T ss_pred HHHHHHH-HHHHHHHHHHhc--CCCEEEEcCCcchHHHHHHHHHcCCCEEEEec-ch-----------------------
Confidence 1122222 234456788899 9999999855443 44689999999886432 11
Q ss_pred CccccCCCCCCCCcCCCCCccccCCchhHHHHHHhhhcccCccEEEEcChhhhcHHHHHHHhhccccCCCCCCCeEEecc
Q 043859 166 NESFNIPGCRPLRPEDVVDPMLDRTNQQYFEYVHIGEEIPLSDGILVNTWEDLQPTALTALRDDKSLGRITKVPIYTVGP 245 (484)
Q Consensus 166 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~rp~~p~~~~vGp 245 (484)
.||+ ...+. .+.++.+.. ++++.. +.....+++|+
T Consensus 126 -----~~G~-------------------~nr~l-----~~~a~~v~~-~~~~~~---------------~~~~k~~~~g~ 160 (365)
T 3s2u_A 126 -----VAGT-------------------ANRSL-----APIARRVCE-AFPDTF---------------PASDKRLTTGN 160 (365)
T ss_dssp -----SCCH-------------------HHHHH-----GGGCSEEEE-SSTTSS---------------CC---CEECCC
T ss_pred -----hhhh-------------------HHHhh-----ccccceeee-cccccc---------------cCcCcEEEECC
Confidence 1111 01111 112233332 222211 10234778886
Q ss_pred ccCCCCCCCCccccccccCCCCCCeEEEEecCCCCCCCHHHHHHHHHHHhhC----CCcEEEEEeCCCCCCCCCCcccCC
Q 043859 246 IIRRLGPAGSWNELFDWLDKQPSESVLYVSFGSGGTLTYEQITELAWGLELS----QQRFIWVVRLPNETTGDGSFFTAG 321 (484)
Q Consensus 246 l~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~----~~~~i~~~~~~~~~~~~~~~~~~~ 321 (484)
....... .+...+....+++++|+|..||.+... ..+.+.++++.+ +..++|.++...
T Consensus 161 pvr~~~~----~~~~~~~~~~~~~~~ilv~gGs~g~~~--~~~~~~~al~~l~~~~~~~vi~~~G~~~------------ 222 (365)
T 3s2u_A 161 PVRGELF----LDAHARAPLTGRRVNLLVLGGSLGAEP--LNKLLPEALAQVPLEIRPAIRHQAGRQH------------ 222 (365)
T ss_dssp CCCGGGC----CCTTSSCCCTTSCCEEEECCTTTTCSH--HHHHHHHHHHTSCTTTCCEEEEECCTTT------------
T ss_pred CCchhhc----cchhhhcccCCCCcEEEEECCcCCccc--cchhhHHHHHhcccccceEEEEecCccc------------
Confidence 6654211 111112222335678999999986543 334455666543 345666652211
Q ss_pred CCCCCCCccCCCchhHHHhhc--CCceEecCCcchh-hhccCCCccccccccCchhHHHHHhcCCceeecccc----ccc
Q 043859 322 SGAGDDDLSSLLPDGFLSRTL--DIGVVVPQWAPQI-DILSHPSVGGFLSHCGWNSTLESITNGVPMIVWPLY----SEQ 394 (484)
Q Consensus 322 ~~~~~~~~~~~lp~~~~~~~~--~~~v~v~~~ipq~-~vL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~P~~----~DQ 394 (484)
.+...+.+. ..++.+..|+++. ++|+.+| ++|||+|.+|++|++++|+|+|.+|+. .||
T Consensus 223 ------------~~~~~~~~~~~~~~~~v~~f~~dm~~~l~~aD--lvI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q 288 (365)
T 3s2u_A 223 ------------AEITAERYRTVAVEADVAPFISDMAAAYAWAD--LVICRAGALTVSELTAAGLPAFLVPLPHAIDDHQ 288 (365)
T ss_dssp ------------HHHHHHHHHHTTCCCEEESCCSCHHHHHHHCS--EEEECCCHHHHHHHHHHTCCEEECC-----CCHH
T ss_pred ------------cccccceecccccccccccchhhhhhhhccce--EEEecCCcchHHHHHHhCCCeEEeccCCCCCcHH
Confidence 122223222 3477888999985 6999999 899999999999999999999999974 589
Q ss_pred chhHHHHHhhhcceEEeeecCCCCccCHHHHHHHHHHHhcccc
Q 043859 395 RMNATILTEELGVAIRSKVLPSKGVVGREEIKTMVRRILVDEE 437 (484)
Q Consensus 395 ~~na~rv~~~~G~g~~l~~~~~~~~~~~~~l~~~i~~vl~~~~ 437 (484)
..||..+ ++.|+|+.+.. +.++++.|.++|.++|.|++
T Consensus 289 ~~NA~~l-~~~G~a~~l~~----~~~~~~~L~~~i~~ll~d~~ 326 (365)
T 3s2u_A 289 TRNAEFL-VRSGAGRLLPQ----KSTGAAELAAQLSEVLMHPE 326 (365)
T ss_dssp HHHHHHH-HTTTSEEECCT----TTCCHHHHHHHHHHHHHCTH
T ss_pred HHHHHHH-HHCCCEEEeec----CCCCHHHHHHHHHHHHCCHH
Confidence 9999999 69999999863 67899999999999999976
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.94 E-value=2.2e-26 Score=201.48 Aligned_cols=163 Identities=25% Similarity=0.428 Sum_probs=135.7
Q ss_pred CCccccccccCCCCCCeEEEEecCCCC-CCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCCCCCCcccCCCCCCCCCccCC
Q 043859 254 GSWNELFDWLDKQPSESVLYVSFGSGG-TLTYEQITELAWGLELSQQRFIWVVRLPNETTGDGSFFTAGSGAGDDDLSSL 332 (484)
Q Consensus 254 ~~~~~~~~~l~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (484)
+++.++.+|++..+++++|||++||+. ....+.+..++++++..+.+++|+.++.. ...
T Consensus 6 ~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~--------------------~~~ 65 (170)
T 2o6l_A 6 PLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK--------------------PDT 65 (170)
T ss_dssp CCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC--------------------CTT
T ss_pred CCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC--------------------ccc
Confidence 367889999987666789999999985 44667789999999888899999984321 122
Q ss_pred CchhHHHhhcCCceEecCCcchhhhccCCCccccccccCchhHHHHHhcCCceeecccccccchhHHHHHhhhcceEEee
Q 043859 333 LPDGFLSRTLDIGVVVPQWAPQIDILSHPSVGGFLSHCGWNSTLESITNGVPMIVWPLYSEQRMNATILTEELGVAIRSK 412 (484)
Q Consensus 333 lp~~~~~~~~~~~v~v~~~ipq~~vL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~g~~l~ 412 (484)
+++ |+.+.+|+||.++|.++..++||||||+||++|++++|+|+|++|...||..||.++ ++.|+|+.++
T Consensus 66 ~~~---------~v~~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l-~~~g~g~~~~ 135 (170)
T 2o6l_A 66 LGL---------NTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHM-KARGAAVRVD 135 (170)
T ss_dssp CCT---------TEEEESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH-HTTTSEEECC
T ss_pred CCC---------cEEEecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHH-HHcCCeEEec
Confidence 333 889999999999995444449999999999999999999999999999999999999 6999999986
Q ss_pred ecCCCCccCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHH
Q 043859 413 VLPSKGVVGREEIKTMVRRILVDEEGYEIRAKVKELQRSAQ 453 (484)
Q Consensus 413 ~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~ 453 (484)
. ..++.++|.++|.+++.|++ |+++++++++.++
T Consensus 136 ~----~~~~~~~l~~~i~~ll~~~~---~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 136 F----NTMSSTDLLNALKRVINDPS---YKENVMKLSRIQH 169 (170)
T ss_dssp T----TTCCHHHHHHHHHHHHHCHH---HHHHHHHHC----
T ss_pred c----ccCCHHHHHHHHHHHHcCHH---HHHHHHHHHHHhh
Confidence 3 67899999999999999987 9999999998865
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.85 E-value=3.5e-19 Score=175.17 Aligned_cols=342 Identities=14% Similarity=0.054 Sum_probs=207.2
Q ss_pred CeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCCCCCCCCCchHHH
Q 043859 8 PHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDISGLVDPDAAVVT 87 (484)
Q Consensus 8 ~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 87 (484)
|||++++.+..||..+++.|+++|.++ ||+|++++...... ...++..+ +.+..++....... .......
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~-G~~V~v~~~~~~~~---~~~~~~~g----~~~~~~~~~~~~~~--~~~~~~~ 76 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQ-GWQVRWLGTADRME---ADLVPKHG----IEIDFIRISGLRGK--GIKALIA 76 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTT-TCEEEEEECTTSTH---HHHGGGGT----CEEEECCCCCCTTC--CHHHHHT
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHc-CCEEEEEecCCcch---hhhccccC----CceEEecCCccCcC--ccHHHHH
Confidence 899999988789999999999999999 99999999875321 12333344 66766664322111 0000000
Q ss_pred HHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCch--hhHHHHHHHhCCCeEEEecccHHHHHHHHhhccccccccCccccC
Q 043859 88 IISVIMREIKPAFRSAISALKTTPTALIVDLFG--TESLAIAEELQIPKYVYVGTNAWCVALFVYAPTLDKTVQGQYVVQ 165 (484)
Q Consensus 88 ~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~~--~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 165 (484)
..... ......+.+++++. +||+|+++... ..+..+++.+|+|+|......
T Consensus 77 ~~~~~-~~~~~~l~~~l~~~--~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~------------------------ 129 (364)
T 1f0k_A 77 APLRI-FNAWRQARAIMKAY--KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG------------------------ 129 (364)
T ss_dssp CHHHH-HHHHHHHHHHHHHH--CCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS------------------------
T ss_pred HHHHH-HHHHHHHHHHHHhc--CCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC------------------------
Confidence 01111 12345567788888 99999998543 344567888999988643211
Q ss_pred CccccCCCCCCCCcCCCCCccccCCchhHHHHHHhhhcccCccEEEEcChhhhcHHHHHHHhhccccCCCCCCCeEEecc
Q 043859 166 NESFNIPGCRPLRPEDVVDPMLDRTNQQYFEYVHIGEEIPLSDGILVNTWEDLQPTALTALRDDKSLGRITKVPIYTVGP 245 (484)
Q Consensus 166 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~rp~~p~~~~vGp 245 (484)
.++ .... . ..+..+.+++.+... +|++.++|.
T Consensus 130 -----~~~-------------------~~~~---~--~~~~~d~v~~~~~~~-------------------~~~~~~i~n 161 (364)
T 1f0k_A 130 -----IAG-------------------LTNK---W--LAKIATKVMQAFPGA-------------------FPNAEVVGN 161 (364)
T ss_dssp -----SCC-------------------HHHH---H--HTTTCSEEEESSTTS-------------------SSSCEECCC
T ss_pred -----CCc-------------------HHHH---H--HHHhCCEEEecChhh-------------------cCCceEeCC
Confidence 000 0000 0 012344444433211 124556664
Q ss_pred ccCCCCCCCCccccccccCCCCCCeEEEEecCCCCCCCHHHHHHHHHHHhhC--CCcEEEEEeCCCCCCCCCCcccCCCC
Q 043859 246 IIRRLGPAGSWNELFDWLDKQPSESVLYVSFGSGGTLTYEQITELAWGLELS--QQRFIWVVRLPNETTGDGSFFTAGSG 323 (484)
Q Consensus 246 l~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~ 323 (484)
.+...... . ....+.+...+++++|++..|+.. .......++++++.+ +.++++.++..
T Consensus 162 ~v~~~~~~-~-~~~~~~~~~~~~~~~il~~~g~~~--~~k~~~~li~a~~~l~~~~~~l~i~G~~--------------- 222 (364)
T 1f0k_A 162 PVRTDVLA-L-PLPQQRLAGREGPVRVLVVGGSQG--ARILNQTMPQVAAKLGDSVTIWHQSGKG--------------- 222 (364)
T ss_dssp CCCHHHHT-S-CCHHHHHTTCCSSEEEEEECTTTC--CHHHHHHHHHHHHHHGGGEEEEEECCTT---------------
T ss_pred ccchhhcc-c-chhhhhcccCCCCcEEEEEcCchH--hHHHHHHHHHHHHHhcCCcEEEEEcCCc---------------
Confidence 33221000 0 011112222234567888888764 234455566666554 45556655211
Q ss_pred CCCCCccCCCchhHHHhh---cCCceEecCCcch-hhhccCCCccccccccCchhHHHHHhcCCceeecccc---cccch
Q 043859 324 AGDDDLSSLLPDGFLSRT---LDIGVVVPQWAPQ-IDILSHPSVGGFLSHCGWNSTLESITNGVPMIVWPLY---SEQRM 396 (484)
Q Consensus 324 ~~~~~~~~~lp~~~~~~~---~~~~v~v~~~ipq-~~vL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~P~~---~DQ~~ 396 (484)
. .+.+.+.. .-.++.+.+|+++ .++|+.++ ++|+++|.+++.||+++|+|+|+.|.. .||..
T Consensus 223 -----~----~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad--~~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~ 291 (364)
T 1f0k_A 223 -----S----QQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWAD--VVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYW 291 (364)
T ss_dssp -----C----HHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCS--EEEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHH
T ss_pred -----h----HHHHHHHHhhcCCCceEEecchhhHHHHHHhCC--EEEECCchHHHHHHHHhCCCEEEeeCCCCchhHHH
Confidence 1 12333222 2247888899954 67999999 799999999999999999999999987 79999
Q ss_pred hHHHHHhhhcceEEeeecCCCCccCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHhh
Q 043859 397 NATILTEELGVAIRSKVLPSKGVVGREEIKTMVRRILVDEEGYEIRAKVKELQRSAQKAWTRESGSSYSSLARLAKECGM 476 (484)
Q Consensus 397 na~rv~~~~G~g~~l~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~~~g~~~~~~~~~~~~~~~ 476 (484)
|+..+ .+.|.|+.++. ...+.+++.++|.++ |++ .+++. ++.+++. .+..+..+.++.+.+.+++
T Consensus 292 ~~~~~-~~~g~g~~~~~----~d~~~~~la~~i~~l--~~~---~~~~~---~~~~~~~--~~~~~~~~~~~~~~~~y~~ 356 (364)
T 1f0k_A 292 NALPL-EKAGAAKIIEQ----PQLSVDAVANTLAGW--SRE---TLLTM---AERARAA--SIPDATERVANEVSRVARA 356 (364)
T ss_dssp HHHHH-HHTTSEEECCG----GGCCHHHHHHHHHTC--CHH---HHHHH---HHHHHHT--CCTTHHHHHHHHHHHHHTT
T ss_pred HHHHH-HhCCcEEEecc----ccCCHHHHHHHHHhc--CHH---HHHHH---HHHHHHh--hccCHHHHHHHHHHHHHHH
Confidence 99998 58899998763 456799999999998 654 44333 3333322 3345566666777777666
Q ss_pred hhh
Q 043859 477 MTK 479 (484)
Q Consensus 477 ~~~ 479 (484)
++.
T Consensus 357 ~~~ 359 (364)
T 1f0k_A 357 LEH 359 (364)
T ss_dssp C--
T ss_pred HHh
Confidence 643
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.61 E-value=1.3e-14 Score=135.60 Aligned_cols=117 Identities=9% Similarity=0.033 Sum_probs=88.4
Q ss_pred CCeEEEEecCCCCCCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCCCCCCcccCCCCCCCCCccCCCchhHHHhhc-CCce
Q 043859 268 SESVLYVSFGSGGTLTYEQITELAWGLELSQQRFIWVVRLPNETTGDGSFFTAGSGAGDDDLSSLLPDGFLSRTL-DIGV 346 (484)
Q Consensus 268 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~~v 346 (484)
..+.|+|++|... ..+....+++++.... ++.++.+.. ....+.+.+... ..|+
T Consensus 156 ~~~~ILv~~GG~d--~~~l~~~vl~~L~~~~-~i~vv~G~~----------------------~~~~~~l~~~~~~~~~v 210 (282)
T 3hbm_A 156 KKYDFFICMGGTD--IKNLSLQIASELPKTK-IISIATSSS----------------------NPNLKKLQKFAKLHNNI 210 (282)
T ss_dssp CCEEEEEECCSCC--TTCHHHHHHHHSCTTS-CEEEEECTT----------------------CTTHHHHHHHHHTCSSE
T ss_pred cCCeEEEEECCCc--hhhHHHHHHHHhhcCC-CEEEEECCC----------------------chHHHHHHHHHhhCCCE
Confidence 3568999999643 2346677888886644 555555322 111233433332 3589
Q ss_pred EecCCcchh-hhccCCCccccccccCchhHHHHHhcCCceeecccccccchhHHHHHhhhcceEEeee
Q 043859 347 VVPQWAPQI-DILSHPSVGGFLSHCGWNSTLESITNGVPMIVWPLYSEQRMNATILTEELGVAIRSKV 413 (484)
Q Consensus 347 ~v~~~ipq~-~vL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~g~~l~~ 413 (484)
.+..|+++. +++..++ ++||+|| +|+.|+++.|+|+|++|...+|..||..+ ++.|+++.+..
T Consensus 211 ~v~~~~~~m~~~m~~aD--lvI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l-~~~G~~~~~~~ 274 (282)
T 3hbm_A 211 RLFIDHENIAKLMNESN--KLIISAS-SLVNEALLLKANFKAICYVKNQESTATWL-AKKGYEVEYKY 274 (282)
T ss_dssp EEEESCSCHHHHHHTEE--EEEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHH-HHTTCEEECGG
T ss_pred EEEeCHHHHHHHHHHCC--EEEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHH-HHCCCEEEcch
Confidence 999999886 6999999 8999999 89999999999999999999999999999 69999999864
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.60 E-value=1.5e-15 Score=136.27 Aligned_cols=132 Identities=19% Similarity=0.162 Sum_probs=94.7
Q ss_pred CCCeEEEEecCCCCCCCHHHHHHH-----HHHHhhCC-CcEEEEEeCCCCCCCCCCcccCCCCCCCCCccCCCchhHHHh
Q 043859 267 PSESVLYVSFGSGGTLTYEQITEL-----AWGLELSQ-QRFIWVVRLPNETTGDGSFFTAGSGAGDDDLSSLLPDGFLSR 340 (484)
Q Consensus 267 ~~~~~v~vs~Gs~~~~~~~~~~~~-----~~al~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~ 340 (484)
+++++|||+.||... -.+.+..+ +.+|...+ .+++|+++.... . ..+.+...
T Consensus 26 ~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~--------------------~-~~~~~~~~ 83 (224)
T 2jzc_A 26 IEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYS--------------------S-EFEHLVQE 83 (224)
T ss_dssp CCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSC--------------------C-CCCSHHHH
T ss_pred CCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCch--------------------h-hHHHHHHh
Confidence 456799999999732 23444444 48887777 789998854321 0 00111000
Q ss_pred h---------------------------cCCceEecCCcchh-hhcc-CCCccccccccCchhHHHHHhcCCceeecccc
Q 043859 341 T---------------------------LDIGVVVPQWAPQI-DILS-HPSVGGFLSHCGWNSTLESITNGVPMIVWPLY 391 (484)
Q Consensus 341 ~---------------------------~~~~v~v~~~ipq~-~vL~-~~~~~~~ItHgG~gs~~eal~~GvP~v~~P~~ 391 (484)
. ..-++.+.+|+++. ++|+ .++ ++|||||.||++|++++|+|+|++|..
T Consensus 84 ~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Ad--lvIshaGagTv~Eal~~G~P~IvVP~~ 161 (224)
T 2jzc_A 84 RGGQRESQKIPIDQFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSD--LVISHAGTGSILDSLRLNKPLIVCVND 161 (224)
T ss_dssp HTCEECSCCCSSCTTCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCS--CEEESSCHHHHHHHHHTTCCCCEECCS
T ss_pred hhccccccccccccccccccccccccccCCceEEEeeccchHHHHHHhcCC--EEEECCcHHHHHHHHHhCCCEEEEcCc
Confidence 0 11256677898886 7999 999 899999999999999999999999974
Q ss_pred ----cccchhHHHHHhhhcceEEeeecCCCCccCHHHHHHHHHHH
Q 043859 392 ----SEQRMNATILTEELGVAIRSKVLPSKGVVGREEIKTMVRRI 432 (484)
Q Consensus 392 ----~DQ~~na~rv~~~~G~g~~l~~~~~~~~~~~~~l~~~i~~v 432 (484)
.||..||.++ ++.|+++.+ +++.|.++|.++
T Consensus 162 ~~~~~HQ~~nA~~l-~~~G~~~~~---------~~~~L~~~i~~l 196 (224)
T 2jzc_A 162 SLMDNHQQQIADKF-VELGYVWSC---------APTETGLIAGLR 196 (224)
T ss_dssp SCCCCHHHHHHHHH-HHHSCCCEE---------CSCTTTHHHHHH
T ss_pred ccccchHHHHHHHH-HHCCCEEEc---------CHHHHHHHHHHH
Confidence 4799999999 689998653 446677777776
No 25
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.41 E-value=1.5e-11 Score=120.97 Aligned_cols=79 Identities=18% Similarity=0.220 Sum_probs=61.5
Q ss_pred CceEecCCcch---hhhccCCCccccccccCchhHHHHHhcCCceeecccccccchhHHHHHhhhcceEEeeecCCCCcc
Q 043859 344 IGVVVPQWAPQ---IDILSHPSVGGFLSHCGWNSTLESITNGVPMIVWPLYSEQRMNATILTEELGVAIRSKVLPSKGVV 420 (484)
Q Consensus 344 ~~v~v~~~ipq---~~vL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~g~~l~~~~~~~~~ 420 (484)
+++.+.+++++ .++|+.++ +||+++| |.+.||+++|+|+|+.+..+++... + +.|.|+.+. .
T Consensus 255 ~~v~~~g~~g~~~~~~~~~~ad--~~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~---~--~~g~g~lv~-------~ 319 (376)
T 1v4v_A 255 RNFVLLDPLEYGSMAALMRASL--LLVTDSG-GLQEEGAALGVPVVVLRNVTERPEG---L--KAGILKLAG-------T 319 (376)
T ss_dssp TTEEEECCCCHHHHHHHHHTEE--EEEESCH-HHHHHHHHTTCCEEECSSSCSCHHH---H--HHTSEEECC-------S
T ss_pred CCEEEECCCCHHHHHHHHHhCc--EEEECCc-CHHHHHHHcCCCEEeccCCCcchhh---h--cCCceEECC-------C
Confidence 47888766554 57999999 7898884 4466999999999998876666552 2 467887753 3
Q ss_pred CHHHHHHHHHHHhcccc
Q 043859 421 GREEIKTMVRRILVDEE 437 (484)
Q Consensus 421 ~~~~l~~~i~~vl~~~~ 437 (484)
++++|.++|.++++|++
T Consensus 320 d~~~la~~i~~ll~d~~ 336 (376)
T 1v4v_A 320 DPEGVYRVVKGLLENPE 336 (376)
T ss_dssp CHHHHHHHHHHHHTCHH
T ss_pred CHHHHHHHHHHHHhChH
Confidence 89999999999999864
No 26
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.37 E-value=2.1e-11 Score=120.34 Aligned_cols=318 Identities=15% Similarity=0.066 Sum_probs=168.9
Q ss_pred CeEEEEcCCCccChHHHHHHHHHHHhcCCC-eEEEEecCCCchhHHHHHhhhccCCCceEE-EecCCCCCCCCCCCCchH
Q 043859 8 PHAVLLASPGVGHVIPVLELGKRLVTLYNF-QVTIFVVASQTSAAESKILQSAMSSKLCHV-IEIPAPDISGLVDPDAAV 85 (484)
Q Consensus 8 ~~il~~~~p~~GHv~P~l~La~~L~~r~Gh-~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~ 85 (484)
|||++++. ..++...+..|+++|+++ |+ ++.++.+..... .....++..+ +.+ ..++... .....
T Consensus 1 mkIl~v~~-~~~~~~~~~~l~~~L~~~-g~~~~~v~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~------~~~~~ 67 (384)
T 1vgv_A 1 MKVLTVFG-TRPEAIKMAPLVHALAKD-PFFEAKVCVTAQHRE-MLDQVLKLFS----IVPDYDLNIMQ------PGQGL 67 (384)
T ss_dssp CEEEEEEC-SHHHHHHHHHHHHHHHHS-TTCEEEEEECCSSGG-GGHHHHHHHT----CCCSEECCCCS------TTSCH
T ss_pred CeEEEEec-ccHHHHHHHHHHHHHHhC-CCCceEEEEcCCCHH-HHHHHHHHcC----CCCCcceecCC------CCccH
Confidence 78988764 467778889999999999 84 877665543222 2223444444 322 2222211 11111
Q ss_pred HHHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCC--c-hhhHHHHHHHhCCCeEEEecccHHHHHHHHhhccccccccCcc
Q 043859 86 VTIISVIMREIKPAFRSAISALKTTPTALIVDL--F-GTESLAIAEELQIPKYVYVGTNAWCVALFVYAPTLDKTVQGQY 162 (484)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~--~-~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~ 162 (484)
. .........+.+++++. +||+|++-. . ...+..+|..+|+|++.......
T Consensus 68 ~----~~~~~~~~~l~~~l~~~--~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~-------------------- 121 (384)
T 1vgv_A 68 T----EITCRILEGLKPILAEF--KPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLR-------------------- 121 (384)
T ss_dssp H----HHHHHHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCC--------------------
T ss_pred H----HHHHHHHHHHHHHHHHh--CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEecccc--------------------
Confidence 1 11222345678888889 999999742 2 23345677889999876432100
Q ss_pred ccCCccccCCCCCCCCcCCCCCccccCCchhHHHHHHhhhcccCccEEEEcChhhhcHHHHHHHhhccccCCCCCC--Ce
Q 043859 163 VVQNESFNIPGCRPLRPEDVVDPMLDRTNQQYFEYVHIGEEIPLSDGILVNTWEDLQPTALTALRDDKSLGRITKV--PI 240 (484)
Q Consensus 163 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~rp~~p--~~ 240 (484)
.. . .+.. ......+.. ..+.++.++..+-...+. +.. .+ .+ ++
T Consensus 122 -------------~~---~----~~~~---~~~~~~~~~-~~~~~d~ii~~s~~~~~~-----l~~---~g---~~~~~i 166 (384)
T 1vgv_A 122 -------------TG---D----LYSP---WPEEANRTL-TGHLAMYHFSPTETSRQN-----LLR---EN---VADSRI 166 (384)
T ss_dssp -------------CS---C----TTSS---TTHHHHHHH-HHTTCSEEEESSHHHHHH-----HHH---TT---CCGGGE
T ss_pred -------------cc---c----ccCC---CchHhhHHH-HHhhccEEEcCcHHHHHH-----HHH---cC---CChhhE
Confidence 00 0 0000 001111111 012356666655432221 111 11 22 27
Q ss_pred EEeccccCCCCCCCCc---------cccccccC-CCCCCeEEEEecCCCCCCCHHHHHHHHHHHhhC-----CCcEEEEE
Q 043859 241 YTVGPIIRRLGPAGSW---------NELFDWLD-KQPSESVLYVSFGSGGTLTYEQITELAWGLELS-----QQRFIWVV 305 (484)
Q Consensus 241 ~~vGpl~~~~~~~~~~---------~~~~~~l~-~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~ 305 (484)
..+|....+....... .++.+.++ -.+++++++++.|....... .+..+++|++.+ +.++++..
T Consensus 167 ~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~~k-g~~~li~a~~~l~~~~~~~~l~i~~ 245 (384)
T 1vgv_A 167 FITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGR-GFEEICHALADIATTHQDIQIVYPV 245 (384)
T ss_dssp EECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEEECCCBSSCCH-HHHHHHHHHHHHHHHCTTEEEEEEC
T ss_pred EEeCChHHHHHHhhhhccccchhhhHHHHHhccccCCCCCEEEEEeCCccccch-HHHHHHHHHHHHHhhCCCeEEEEEc
Confidence 7777432110000000 12233332 21245678888887653322 344555555432 34544432
Q ss_pred eCCCCCCCCCCcccCCCCCCCCCccCCCchhHHHhhc-CCceEecCCcch---hhhccCCCccccccccCchhHHHHHhc
Q 043859 306 RLPNETTGDGSFFTAGSGAGDDDLSSLLPDGFLSRTL-DIGVVVPQWAPQ---IDILSHPSVGGFLSHCGWNSTLESITN 381 (484)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~~v~v~~~ipq---~~vL~~~~~~~~ItHgG~gs~~eal~~ 381 (484)
+.. ..+-+.+.+... .+++.+.+++++ .++|+.++ ++|+.+|. +++||+++
T Consensus 246 g~~----------------------~~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~~~ad--~~v~~Sg~-~~lEA~a~ 300 (384)
T 1vgv_A 246 HLN----------------------PNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAW--LILTDSGG-IQEEAPSL 300 (384)
T ss_dssp CBC----------------------HHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCS--EEEESSST-GGGTGGGG
T ss_pred CCC----------------------HHHHHHHHHHhhcCCCEEEeCCCCHHHHHHHHHhCc--EEEECCcc-hHHHHHHc
Confidence 110 001122222222 257888666654 56899999 78888854 48899999
Q ss_pred CCceeecccccccchhHHHHHhhhcceEEeeecCCCCccCHHHHHHHHHHHhcccc
Q 043859 382 GVPMIVWPLYSEQRMNATILTEELGVAIRSKVLPSKGVVGREEIKTMVRRILVDEE 437 (484)
Q Consensus 382 GvP~v~~P~~~DQ~~na~rv~~~~G~g~~l~~~~~~~~~~~~~l~~~i~~vl~~~~ 437 (484)
|+|+|+.+..+++.. +. +.|.|+.++ . ++++|.++|.++++|++
T Consensus 301 G~PvI~~~~~~~~~e----~v-~~g~g~lv~-----~--d~~~la~~i~~ll~d~~ 344 (384)
T 1vgv_A 301 GKPVLVMRDTTERPE----AV-TAGTVRLVG-----T--DKQRIVEEVTRLLKDEN 344 (384)
T ss_dssp TCCEEEESSCCSCHH----HH-HHTSEEEEC-----S--SHHHHHHHHHHHHHCHH
T ss_pred CCCEEEccCCCCcch----hh-hCCceEEeC-----C--CHHHHHHHHHHHHhChH
Confidence 999999987444332 32 457888764 3 89999999999999864
No 27
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.35 E-value=4.3e-11 Score=118.71 Aligned_cols=319 Identities=12% Similarity=0.066 Sum_probs=167.1
Q ss_pred CCCCeEEEEcCCCccChHHHHHHHHHHHhcC-CCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCCCCCCCCCc
Q 043859 5 SSKPHAVLLASPGVGHVIPVLELGKRLVTLY-NFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDISGLVDPDA 83 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P~l~La~~L~~r~-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 83 (484)
|++|||++++. +.....=+..|.++|.++. |+++.++.+..-.+ ....+++.++..+++. +.. . ....
T Consensus 25 m~~~kI~~v~G-tr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~-m~~~~~~~~~i~~~~~---l~v---~---~~~~ 93 (403)
T 3ot5_A 25 MAKIKVMSIFG-TRPEAIKMAPLVLALEKEPETFESTVVITAQHRE-MLDQVLEIFDIKPDID---LDI---M---KKGQ 93 (403)
T ss_dssp -CCEEEEEEEC-SHHHHHHHHHHHHHHHTCTTTEEEEEEECC------CHHHHHHTTCCCSEE---CCC---C---C-CC
T ss_pred cccceEEEEEe-cChhHHHHHHHHHHHHhCCCCCcEEEEEecCcHH-HHHHHHHhcCCCCCcc---ccc---C---CCCC
Confidence 66678887764 4445555688999999873 48877666653221 3344556566211111 111 0 0111
Q ss_pred hHHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEeC--Cc-hhhHHHHHHHhCCCeEEEecccHHHHHHHHhhccccccccC
Q 043859 84 AVVTIISVIMREIKPAFRSAISALKTTPTALIVD--LF-GTESLAIAEELQIPKYVYVGTNAWCVALFVYAPTLDKTVQG 160 (484)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D--~~-~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~ 160 (484)
... .........+.++++++ +||+|++- .. ..++..+|.++|||++.+....
T Consensus 94 ~~~----~~~~~~~~~l~~~l~~~--kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~agl------------------- 148 (403)
T 3ot5_A 94 TLA----EITSRVMNGINEVIAAE--NPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAGL------------------- 148 (403)
T ss_dssp CHH----HHHHHHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCC-------------------
T ss_pred CHH----HHHHHHHHHHHHHHHHc--CCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCc-------------------
Confidence 121 22334556788899999 99999963 22 3345678999999976543110
Q ss_pred ccccCCccccCCCCCCCCcCCCCCccccCC-chhHHHHHHhhhcccCccEEEEcChhhhcHHHHHHHhhccccCCCCCC-
Q 043859 161 QYVVQNESFNIPGCRPLRPEDVVDPMLDRT-NQQYFEYVHIGEEIPLSDGILVNTWEDLQPTALTALRDDKSLGRITKV- 238 (484)
Q Consensus 161 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~rp~~p- 238 (484)
..+ . .+... ....+.+... .++.++..+-...+ .+.. .+ .+
T Consensus 149 --------------rs~---~----~~~~~p~~~~r~~~~~-----~a~~~~~~se~~~~-----~l~~---~G---i~~ 191 (403)
T 3ot5_A 149 --------------RTW---N----KYSPFPEEMNRQLTGV-----MADIHFSPTKQAKE-----NLLA---EG---KDP 191 (403)
T ss_dssp --------------CCS---C----TTSSTTHHHHHHHHHH-----HCSEEEESSHHHHH-----HHHH---TT---CCG
T ss_pred --------------ccc---c----cccCCcHHHHHHHHHH-----hcCEEECCCHHHHH-----HHHH---cC---CCc
Confidence 000 0 00000 0011111111 13444544432211 1111 11 22
Q ss_pred -CeEEeccccCC----CCCCCCccccccccCCCCCCeEEEEecCCCCCCCHHHHHHHHHHHhh-----CCCcEEEEEeCC
Q 043859 239 -PIYTVGPIIRR----LGPAGSWNELFDWLDKQPSESVLYVSFGSGGTLTYEQITELAWGLEL-----SQQRFIWVVRLP 308 (484)
Q Consensus 239 -~~~~vGpl~~~----~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~ 308 (484)
+++++|....+ ........+..+.+ +++++++++.|...... +.+..+++|++. .+.++++..+..
T Consensus 192 ~~i~vvGn~~~D~~~~~~~~~~~~~~~~~l---~~~~~vlv~~~r~~~~~-~~l~~ll~a~~~l~~~~~~~~~v~~~~~~ 267 (403)
T 3ot5_A 192 ATIFVTGNTAIDALKTTVQKDYHHPILENL---GDNRLILMTAHRRENLG-EPMQGMFEAVREIVESREDTELVYPMHLN 267 (403)
T ss_dssp GGEEECCCHHHHHHHHHSCTTCCCHHHHSC---TTCEEEEECCCCHHHHT-THHHHHHHHHHHHHHHCTTEEEEEECCSC
T ss_pred ccEEEeCCchHHHHHhhhhhhcchHHHHhc---cCCCEEEEEeCcccccC-cHHHHHHHHHHHHHHhCCCceEEEecCCC
Confidence 38899853322 01000111222223 34568888766321111 124555555543 244565553211
Q ss_pred CCCCCCCCcccCCCCCCCCCccCCCchhHHHhhc-CCceEecCCcch---hhhccCCCccccccccCchhHHHHHhcCCc
Q 043859 309 NETTGDGSFFTAGSGAGDDDLSSLLPDGFLSRTL-DIGVVVPQWAPQ---IDILSHPSVGGFLSHCGWNSTLESITNGVP 384 (484)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~~v~v~~~ipq---~~vL~~~~~~~~ItHgG~gs~~eal~~GvP 384 (484)
. .+-+.+.+... .+++.+.+++++ ..+++.++ ++|+-.|. .+.||.++|+|
T Consensus 268 --------------------~--~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad--~vv~~SGg-~~~EA~a~g~P 322 (403)
T 3ot5_A 268 --------------------P--AVREKAMAILGGHERIHLIEPLDAIDFHNFLRKSY--LVFTDSGG-VQEEAPGMGVP 322 (403)
T ss_dssp --------------------H--HHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEE--EEEECCHH-HHHHGGGTTCC
T ss_pred --------------------H--HHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcC--EEEECCcc-HHHHHHHhCCC
Confidence 0 00011222122 357888888863 46888999 78988753 33799999999
Q ss_pred eeecccccccchhHHHHHhhhcceEEeeecCCCCccCHHHHHHHHHHHhcccc
Q 043859 385 MIVWPLYSEQRMNATILTEELGVAIRSKVLPSKGVVGREEIKTMVRRILVDEE 437 (484)
Q Consensus 385 ~v~~P~~~DQ~~na~rv~~~~G~g~~l~~~~~~~~~~~~~l~~~i~~vl~~~~ 437 (484)
+|++|-.++++. ++ +.|.|+.+. .++++|.+++.++|.|+.
T Consensus 323 vV~~~~~~~~~e----~v-~~g~~~lv~-------~d~~~l~~ai~~ll~~~~ 363 (403)
T 3ot5_A 323 VLVLRDTTERPE----GI-EAGTLKLIG-------TNKENLIKEALDLLDNKE 363 (403)
T ss_dssp EEECCSSCSCHH----HH-HHTSEEECC-------SCHHHHHHHHHHHHHCHH
T ss_pred EEEecCCCcchh----he-eCCcEEEcC-------CCHHHHHHHHHHHHcCHH
Confidence 999976666554 22 568887753 289999999999999865
No 28
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.32 E-value=8.3e-11 Score=116.46 Aligned_cols=323 Identities=13% Similarity=0.076 Sum_probs=170.6
Q ss_pred CCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCCCCCCCCCch
Q 043859 5 SSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDISGLVDPDAA 84 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 84 (484)
++.|||++++ ++.....=+..|.++|+++.|+++.++.+..-.+ ....+++.++..+.+. +.. . .....
T Consensus 23 ~~m~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~-~~~~~~~~~~i~~~~~---l~~---~---~~~~~ 91 (396)
T 3dzc_A 23 NAMKKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHRE-MLDQVLELFSITPDFD---LNI---M---EPGQT 91 (396)
T ss_dssp -CCEEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSH-HHHHHHHHTTCCCSEE---CCC---C---CTTCC
T ss_pred CCCCeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEecccHH-HHHHHHHhcCCCCcee---eec---C---CCCCC
Confidence 3445776665 5555666678888999875368887666654432 3445556566211221 111 0 01111
Q ss_pred HHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEe--CCch-hhHHHHHHHhCCCeEEEecccHHHHHHHHhhccccccccCc
Q 043859 85 VVTIISVIMREIKPAFRSAISALKTTPTALIV--DLFG-TESLAIAEELQIPKYVYVGTNAWCVALFVYAPTLDKTVQGQ 161 (484)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~--D~~~-~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~ 161 (484)
.. .........+.++++++ +||+|++ |... ..+..+|.++|||++.+....
T Consensus 92 ~~----~~~~~~~~~l~~~l~~~--kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ag~-------------------- 145 (396)
T 3dzc_A 92 LN----GVTSKILLGMQQVLSSE--QPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAGL-------------------- 145 (396)
T ss_dssp HH----HHHHHHHHHHHHHHHHH--CCSEEEEETTSHHHHHHHHHHHTTTCCEEEETCCC--------------------
T ss_pred HH----HHHHHHHHHHHHHHHhc--CCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCc--------------------
Confidence 21 22344566788899999 9999986 3333 334578999999976543110
Q ss_pred cccCCccccCCCCCCCCcCCCCCccccCCchhHHHHHHhhhcccCccEEEEcChhhhcHHHHHHHhhccccCCCCCC--C
Q 043859 162 YVVQNESFNIPGCRPLRPEDVVDPMLDRTNQQYFEYVHIGEEIPLSDGILVNTWEDLQPTALTALRDDKSLGRITKV--P 239 (484)
Q Consensus 162 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~rp~~p--~ 239 (484)
..+ . .+.. +.....+.. ....++.++..+-...+ .+.. .+ .+ +
T Consensus 146 -------------rs~---~----~~~~---~~~~~~r~~-~~~~a~~~~~~se~~~~-----~l~~---~G---~~~~k 190 (396)
T 3dzc_A 146 -------------RTG---N----IYSP---WPEEGNRKL-TAALTQYHFAPTDTSRA-----NLLQ---EN---YNAEN 190 (396)
T ss_dssp -------------CCS---C----TTSS---TTHHHHHHH-HHHTCSEEEESSHHHHH-----HHHH---TT---CCGGG
T ss_pred -------------ccc---c----cccC---CcHHHHHHH-HHHhcCEEECCCHHHHH-----HHHH---cC---CCcCc
Confidence 000 0 0000 001111111 01224455555533211 1111 11 23 3
Q ss_pred eEEeccccCCCC-CC-CC-------ccccccccCC-CCCCeEEEEecCCCCCCCHHHHHHHHHHHhhC-----CCcEEEE
Q 043859 240 IYTVGPIIRRLG-PA-GS-------WNELFDWLDK-QPSESVLYVSFGSGGTLTYEQITELAWGLELS-----QQRFIWV 304 (484)
Q Consensus 240 ~~~vGpl~~~~~-~~-~~-------~~~~~~~l~~-~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~ 304 (484)
+++||....+.. .. .. ..++.+.++- .+++++|+++.+-...... .+..+++|++.+ +.++++.
T Consensus 191 i~vvGn~~~d~~~~~~~~~~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~~~~~~v~~ 269 (396)
T 3dzc_A 191 IFVTGNTVIDALLAVREKIHTDMDLQATLESQFPMLDASKKLILVTGHRRESFGG-GFERICQALITTAEQHPECQILYP 269 (396)
T ss_dssp EEECCCHHHHHHHHHHHHHHHCHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHCTTEEEEEE
T ss_pred EEEECCcHHHHHHHhhhhcccchhhHHHHHHHhCccCCCCCEEEEEECCcccchh-HHHHHHHHHHHHHHhCCCceEEEE
Confidence 888994332200 00 00 0222233331 1345678887632122222 245666666442 4555554
Q ss_pred EeCCCCCCCCCCcccCCCCCCCCCccCCCchhHHHhhc-CCceEecCCcc---hhhhccCCCccccccccCchhHHHHHh
Q 043859 305 VRLPNETTGDGSFFTAGSGAGDDDLSSLLPDGFLSRTL-DIGVVVPQWAP---QIDILSHPSVGGFLSHCGWNSTLESIT 380 (484)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~~v~v~~~ip---q~~vL~~~~~~~~ItHgG~gs~~eal~ 380 (484)
++.. ..+-+.+.+... .+++.+.++++ ...+++.++ ++|+-+| |.+.||.+
T Consensus 270 ~g~~----------------------~~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad--~vv~~SG-g~~~EA~a 324 (396)
T 3dzc_A 270 VHLN----------------------PNVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAH--IILTDSG-GIQEEAPS 324 (396)
T ss_dssp CCBC----------------------HHHHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCS--EEEESCS-GGGTTGGG
T ss_pred eCCC----------------------hHHHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcC--EEEECCc-cHHHHHHH
Confidence 4211 000012222112 35788877774 457889999 7999988 66689999
Q ss_pred cCCceeecccccccchhHHHHHhhhcceEEeeecCCCCccCHHHHHHHHHHHhcccc
Q 043859 381 NGVPMIVWPLYSEQRMNATILTEELGVAIRSKVLPSKGVVGREEIKTMVRRILVDEE 437 (484)
Q Consensus 381 ~GvP~v~~P~~~DQ~~na~rv~~~~G~g~~l~~~~~~~~~~~~~l~~~i~~vl~~~~ 437 (484)
+|+|+|+..-..+++. ++ +.|.++.+. .++++|.+++.++|.|+.
T Consensus 325 ~G~PvV~~~~~~~~~e----~v-~~G~~~lv~-------~d~~~l~~ai~~ll~d~~ 369 (396)
T 3dzc_A 325 LGKPVLVMRETTERPE----AV-AAGTVKLVG-------TNQQQICDALSLLLTDPQ 369 (396)
T ss_dssp GTCCEEECCSSCSCHH----HH-HHTSEEECT-------TCHHHHHHHHHHHHHCHH
T ss_pred cCCCEEEccCCCcchH----HH-HcCceEEcC-------CCHHHHHHHHHHHHcCHH
Confidence 9999999865555432 32 568776643 268999999999999865
No 29
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.30 E-value=9.2e-10 Score=108.60 Aligned_cols=349 Identities=9% Similarity=-0.067 Sum_probs=186.7
Q ss_pred CCCCeEEEEcC--C--CccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCCCCCCC
Q 043859 5 SSKPHAVLLAS--P--GVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDISGLVD 80 (484)
Q Consensus 5 ~~~~~il~~~~--p--~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 80 (484)
+++|||++++. + .-|.-.-+..|++.| + ||+|++++....... ........ .+.+..++.......
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~-g~~v~v~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~-- 71 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--D-PESIVVFASTQNAEE-AHAYDKTL----DYEVIRWPRSVMLPT-- 71 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--C-GGGEEEEEECSSHHH-HHHHHTTC----SSEEEEESSSSCCSC--
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--c-CCeEEEEECCCCccc-hhhhcccc----ceEEEEccccccccc--
Confidence 56899999985 3 568888899999999 7 899999998865421 11222233 377777775321111
Q ss_pred CCchHHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCchh--hHHHHHHHhCCCeEEEecccHHHHHHHHhhccccccc
Q 043859 81 PDAAVVTIISVIMREIKPAFRSAISALKTTPTALIVDLFGT--ESLAIAEELQIPKYVYVGTNAWCVALFVYAPTLDKTV 158 (484)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~~~--~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~ 158 (484)
. .....+.+++++. +||+|++....+ ....++..+++|.+++..-+...
T Consensus 72 ----~---------~~~~~l~~~~~~~--~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~-------------- 122 (394)
T 3okp_A 72 ----P---------TTAHAMAEIIRER--EIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEV-------------- 122 (394)
T ss_dssp ----H---------HHHHHHHHHHHHT--TCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHH--------------
T ss_pred ----h---------hhHHHHHHHHHhc--CCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchh--------------
Confidence 0 2234567788888 999999765433 33457888999955433221100
Q ss_pred cCccccCCccccCCCCCCCCcCCCCCccccCCchhHHHHHHhhhcccCccEEEEcChhhhcHHHHHHHhhccccCCCCCC
Q 043859 159 QGQYVVQNESFNIPGCRPLRPEDVVDPMLDRTNQQYFEYVHIGEEIPLSDGILVNTWEDLQPTALTALRDDKSLGRITKV 238 (484)
Q Consensus 159 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~rp~~p 238 (484)
............+. .++.++.++..|....+.- ...+. + -.
T Consensus 123 ----------------------------~~~~~~~~~~~~~~--~~~~~d~ii~~s~~~~~~~-~~~~~-------~-~~ 163 (394)
T 3okp_A 123 ----------------------------GWSMLPGSRQSLRK--IGTEVDVLTYISQYTLRRF-KSAFG-------S-HP 163 (394)
T ss_dssp ----------------------------HHTTSHHHHHHHHH--HHHHCSEEEESCHHHHHHH-HHHHC-------S-SS
T ss_pred ----------------------------hhhhcchhhHHHHH--HHHhCCEEEEcCHHHHHHH-HHhcC-------C-CC
Confidence 00000011111111 1245667777665433221 11110 0 12
Q ss_pred CeEEeccccCCCCCCC-C---ccccccccCCCCCCeEEEEecCCCCCCCHHHHHHHHHHHhhC-----CCcEEEEEeCCC
Q 043859 239 PIYTVGPIIRRLGPAG-S---WNELFDWLDKQPSESVLYVSFGSGGTLTYEQITELAWGLELS-----QQRFIWVVRLPN 309 (484)
Q Consensus 239 ~~~~vGpl~~~~~~~~-~---~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~ 309 (484)
++..+...+....-.+ . ...+.+.++-. ++..+++..|+... ...+..++++++.+ +.+++++- ..
T Consensus 164 ~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~~l~i~G-~g- 238 (394)
T 3okp_A 164 TFEHLPSGVDVKRFTPATPEDKSATRKKLGFT-DTTPVIACNSRLVP--RKGQDSLIKAMPQVIAARPDAQLLIVG-SG- 238 (394)
T ss_dssp EEEECCCCBCTTTSCCCCHHHHHHHHHHTTCC-TTCCEEEEESCSCG--GGCHHHHHHHHHHHHHHSTTCEEEEEC-CC-
T ss_pred CeEEecCCcCHHHcCCCCchhhHHHHHhcCCC-cCceEEEEEecccc--ccCHHHHHHHHHHHHhhCCCeEEEEEc-Cc-
Confidence 3555553332211001 1 12222222222 23345666787532 12244444444332 44544431 11
Q ss_pred CCCCCCCcccCCCCCCCCCccCCCchhHHHhhc--CCceEecCCcchh---hhccCCCcccccc-----------ccCch
Q 043859 310 ETTGDGSFFTAGSGAGDDDLSSLLPDGFLSRTL--DIGVVVPQWAPQI---DILSHPSVGGFLS-----------HCGWN 373 (484)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~--~~~v~v~~~ipq~---~vL~~~~~~~~It-----------HgG~g 373 (484)
...+.+.+... .+++.+.+|+|+. ++|..++ ++|. -|.-+
T Consensus 239 ----------------------~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad--~~v~ps~~~~~~~~~e~~~~ 294 (394)
T 3okp_A 239 ----------------------RYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAAD--IFAMPARTRGGGLDVEGLGI 294 (394)
T ss_dssp ----------------------TTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCS--EEEECCCCBGGGTBCCSSCH
T ss_pred ----------------------hHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCC--EEEecCccccccccccccCc
Confidence 11122222221 2488888999754 4788999 4554 45567
Q ss_pred hHHHHHhcCCceeecccccccchhHHHHHhhhcceEEeeecCCCCccCHHHHHHHHHHHhcccc-hHHHHHHHHHHHHHH
Q 043859 374 STLESITNGVPMIVWPLYSEQRMNATILTEELGVAIRSKVLPSKGVVGREEIKTMVRRILVDEE-GYEIRAKVKELQRSA 452 (484)
Q Consensus 374 s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~g~~l~~~~~~~~~~~~~l~~~i~~vl~~~~-~~~~~~~a~~l~~~~ 452 (484)
++.||+++|+|+|+.+. ......+ ++ |.|+.++ .-+.+++.++|.+++.|++ .+.+++++++.
T Consensus 295 ~~~Ea~a~G~PvI~~~~----~~~~e~i-~~-~~g~~~~------~~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~---- 358 (394)
T 3okp_A 295 VYLEAQACGVPVIAGTS----GGAPETV-TP-ATGLVVE------GSDVDKLSELLIELLDDPIRRAAMGAAGRAH---- 358 (394)
T ss_dssp HHHHHHHTTCCEEECSS----TTGGGGC-CT-TTEEECC------TTCHHHHHHHHHHHHTCHHHHHHHHHHHHHH----
T ss_pred HHHHHHHcCCCEEEeCC----CChHHHH-hc-CCceEeC------CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHH----
Confidence 89999999999999664 3344444 33 4777753 3479999999999999865 12233333332
Q ss_pred HHhhhcCCCChHHHHHHHHHHHhhhhhc
Q 043859 453 QKAWTRESGSSYSSLARLAKECGMMTKR 480 (484)
Q Consensus 453 ~~a~~~~~g~~~~~~~~~~~~~~~~~~~ 480 (484)
+ .+..+-...++++++-++++.++
T Consensus 359 ---~-~~~~s~~~~~~~~~~~~~~~~r~ 382 (394)
T 3okp_A 359 ---V-EAEWSWEIMGERLTNILQSEPRK 382 (394)
T ss_dssp ---H-HHHTBHHHHHHHHHHHHHSCCC-
T ss_pred ---H-HHhCCHHHHHHHHHHHHHHhccC
Confidence 2 22244556667777777666533
No 30
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.27 E-value=2.3e-09 Score=107.47 Aligned_cols=113 Identities=12% Similarity=0.031 Sum_probs=74.5
Q ss_pred CceEecCCcch---hhhccCCCccccccc----cCchhHHHHHhcCCceeecccccccchhHHHHHhhhcceEEeeecCC
Q 043859 344 IGVVVPQWAPQ---IDILSHPSVGGFLSH----CGWNSTLESITNGVPMIVWPLYSEQRMNATILTEELGVAIRSKVLPS 416 (484)
Q Consensus 344 ~~v~v~~~ipq---~~vL~~~~~~~~ItH----gG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~g~~l~~~~~ 416 (484)
+++.+.+|+|+ .++|..++ ++|.- |.-+++.||+++|+|+|+.+. ......+ ++.+.|+.++
T Consensus 306 ~~v~~~g~~~~~~~~~~~~~ad--v~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~~---- 374 (438)
T 3c48_A 306 KRIRFLDPRPPSELVAVYRAAD--IVAVPSFNESFGLVAMEAQASGTPVIAARV----GGLPIAV-AEGETGLLVD---- 374 (438)
T ss_dssp TTEEEECCCCHHHHHHHHHHCS--EEEECCSCCSSCHHHHHHHHTTCCEEEESC----TTHHHHS-CBTTTEEEES----
T ss_pred CcEEEcCCCChHHHHHHHHhCC--EEEECccccCCchHHHHHHHcCCCEEecCC----CChhHHh-hCCCcEEECC----
Confidence 57888899976 46888999 45543 335689999999999999753 4455555 4556787764
Q ss_pred CCccCHHHHHHHHHHHhcccc-hHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHhhhh
Q 043859 417 KGVVGREEIKTMVRRILVDEE-GYEIRAKVKELQRSAQKAWTRESGSSYSSLARLAKECGMMT 478 (484)
Q Consensus 417 ~~~~~~~~l~~~i~~vl~~~~-~~~~~~~a~~l~~~~~~a~~~~~g~~~~~~~~~~~~~~~~~ 478 (484)
.-+.+++.++|.++++|++ .+.+.+++++..+. .+-...++++++-++++.
T Consensus 375 --~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~---------~s~~~~~~~~~~~~~~~~ 426 (438)
T 3c48_A 375 --GHSPHAWADALATLLDDDETRIRMGEDAVEHART---------FSWAATAAQLSSLYNDAI 426 (438)
T ss_dssp --SCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHH
T ss_pred --CCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh---------CCHHHHHHHHHHHHHHHh
Confidence 3478999999999999865 22344444443332 223334555555555544
No 31
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.24 E-value=1.9e-08 Score=100.53 Aligned_cols=116 Identities=15% Similarity=-0.000 Sum_probs=79.1
Q ss_pred CceEecCCcchh---hhccCCCccccccc----cCchhHHHHHhcCCceeecccccccchhHHHHHhhhcceEEeeecCC
Q 043859 344 IGVVVPQWAPQI---DILSHPSVGGFLSH----CGWNSTLESITNGVPMIVWPLYSEQRMNATILTEELGVAIRSKVLPS 416 (484)
Q Consensus 344 ~~v~v~~~ipq~---~vL~~~~~~~~ItH----gG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~g~~l~~~~~ 416 (484)
+++.+..|+++. ++|..+++ +|.- |--+++.||+++|+|+|+.. .......+ + .|.|..++
T Consensus 311 ~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s~----~~~~~e~~-~-~~~g~~~~---- 378 (439)
T 3fro_A 311 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASA----VGGLRDII-T-NETGILVK---- 378 (439)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSCHHHHHHHHTTCEEEEES----STHHHHHC-C-TTTCEEEC----
T ss_pred CEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccHHHHHHHHCCCCeEEcC----CCCcceeE-E-cCceEEeC----
Confidence 456677889875 47889994 5522 33469999999999999864 34455444 3 46887764
Q ss_pred CCccCHHHHHHHHHHHhc-ccc-hHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHhhhhhcCC
Q 043859 417 KGVVGREEIKTMVRRILV-DEE-GYEIRAKVKELQRSAQKAWTRESGSSYSSLARLAKECGMMTKRNA 482 (484)
Q Consensus 417 ~~~~~~~~l~~~i~~vl~-~~~-~~~~~~~a~~l~~~~~~a~~~~~g~~~~~~~~~~~~~~~~~~~~~ 482 (484)
.-+.+++.++|.++++ |++ .+.+.+++++.. .. .+-...++++++-++++.+++.
T Consensus 379 --~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--------~~-~s~~~~~~~~~~~~~~~~~~~~ 435 (439)
T 3fro_A 379 --AGDPGELANAILKALELSRSDLSKFRENCKKRA--------MS-FSWEKSAERYVKAYTGSIDRAF 435 (439)
T ss_dssp --TTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHH--------HT-SCHHHHHHHHHHHHHTCSCCBC
T ss_pred --CCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH--------hh-CcHHHHHHHHHHHHHHHHHhhh
Confidence 3488999999999998 654 233444444333 12 5566777888888877765543
No 32
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.21 E-value=5.7e-09 Score=103.37 Aligned_cols=345 Identities=12% Similarity=0.022 Sum_probs=177.6
Q ss_pred CCCCeEEEEcCC---C-ccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCCCCCCC
Q 043859 5 SSKPHAVLLASP---G-VGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDISGLVD 80 (484)
Q Consensus 5 ~~~~~il~~~~p---~-~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 80 (484)
.++|||++++.- . .|+-.-+..+++.|.++ ||+|++++....... .+.... ...++..++...
T Consensus 18 ~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~-----~~~~~~-~~~~~~~~~~~~------ 84 (406)
T 2gek_A 18 GSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDA-GHEVSVLAPASPHVK-----LPDYVV-SGGKAVPIPYNG------ 84 (406)
T ss_dssp ---CEEEEECSSCTTSCCHHHHHHHHHHHHHHHT-TCEEEEEESCCTTSC-----CCTTEE-ECCCCC------------
T ss_pred CCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHC-CCeEEEEecCCcccc-----CCcccc-cCCcEEeccccC------
Confidence 457999999842 2 56668899999999999 999999998754310 000000 000111111100
Q ss_pred CCchHHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCchh--hHHHHHHHhCCCeEEEecccHHHHHHHHhhccccccc
Q 043859 81 PDAAVVTIISVIMREIKPAFRSAISALKTTPTALIVDLFGT--ESLAIAEELQIPKYVYVGTNAWCVALFVYAPTLDKTV 158 (484)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~~~--~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~ 158 (484)
... .+ .........+.+++++. +||+|++..... .+..++...++|+|.........
T Consensus 85 ---~~~-~~-~~~~~~~~~l~~~l~~~--~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~-------------- 143 (406)
T 2gek_A 85 ---SVA-RL-RFGPATHRKVKKWIAEG--DFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTTK-------------- 143 (406)
T ss_dssp -----------CCHHHHHHHHHHHHHH--CCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCCCS--------------
T ss_pred ---Ccc-cc-cccHHHHHHHHHHHHhc--CCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcchh--------------
Confidence 000 00 00011234567778888 999999765433 23456777899988765432100
Q ss_pred cCccccCCccccCCCCCCCCcCCCCCccccCCchhHHHHHHhh-hcccCccEEEEcChhhhcHHHHHHHhhccccCCCCC
Q 043859 159 QGQYVVQNESFNIPGCRPLRPEDVVDPMLDRTNQQYFEYVHIG-EEIPLSDGILVNTWEDLQPTALTALRDDKSLGRITK 237 (484)
Q Consensus 159 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~rp~~ 237 (484)
......+.+.. ..+..++.++..+....+.- ...+ + .
T Consensus 144 --------------------------------~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~-~~~~------~---~ 181 (406)
T 2gek_A 144 --------------------------------SLTLSVFQGILRPYHEKIIGRIAVSDLARRWQ-MEAL------G---S 181 (406)
T ss_dssp --------------------------------HHHHHHHHSTTHHHHTTCSEEEESSHHHHHHH-HHHH------S---S
T ss_pred --------------------------------hhhHHHHHHHHHHHHhhCCEEEECCHHHHHHH-HHhc------C---C
Confidence 00011111111 22355677777664433221 1111 1 1
Q ss_pred CCeEEeccccCCCCCCCCccccccccCCCCCCeEEEEecCCC-CCCCHHHHHHHHHHHhhC-----CCcEEEEEeCCCCC
Q 043859 238 VPIYTVGPIIRRLGPAGSWNELFDWLDKQPSESVLYVSFGSG-GTLTYEQITELAWGLELS-----QQRFIWVVRLPNET 311 (484)
Q Consensus 238 p~~~~vGpl~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~-~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~ 311 (484)
.++ .+...+....-.... .-.. +.. + ..+++..|+. .. ...+..++++++.+ +.++++ + +.
T Consensus 182 ~~~-vi~~~v~~~~~~~~~-~~~~-~~~--~-~~~i~~~G~~~~~--~Kg~~~li~a~~~l~~~~~~~~l~i-~-G~--- 248 (406)
T 2gek_A 182 DAV-EIPNGVDVASFADAP-LLDG-YPR--E-GRTVLFLGRYDEP--RKGMAVLLAALPKLVARFPDVEILI-V-GR--- 248 (406)
T ss_dssp CEE-ECCCCBCHHHHHTCC-CCTT-CSC--S-SCEEEEESCTTSG--GGCHHHHHHHHHHHHTTSTTCEEEE-E-SC---
T ss_pred CcE-EecCCCChhhcCCCc-hhhh-ccC--C-CeEEEEEeeeCcc--ccCHHHHHHHHHHHHHHCCCeEEEE-E-cC---
Confidence 224 444322110000000 0000 111 1 2355566765 32 22244445555432 344333 3 11
Q ss_pred CCCCCcccCCCCCCCCCccCCCchhHHHhhc--CCceEecCCcchh---hhccCCCcccccc----ccCc-hhHHHHHhc
Q 043859 312 TGDGSFFTAGSGAGDDDLSSLLPDGFLSRTL--DIGVVVPQWAPQI---DILSHPSVGGFLS----HCGW-NSTLESITN 381 (484)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~--~~~v~v~~~ipq~---~vL~~~~~~~~It----HgG~-gs~~eal~~ 381 (484)
+.. +.+.+... .+++.+.+|+++. ++|..+++ +|. +.|. +++.||+++
T Consensus 249 -------------------~~~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~ 306 (406)
T 2gek_A 249 -------------------GDE-DELREQAGDLAGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAA 306 (406)
T ss_dssp -------------------SCH-HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHH
T ss_pred -------------------CcH-HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHc
Confidence 001 23333222 3589999999874 68999995 543 3344 489999999
Q ss_pred CCceeecccccccchhHHHHHhhhcceEEeeecCCCCccCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhhhcCCC
Q 043859 382 GVPMIVWPLYSEQRMNATILTEELGVAIRSKVLPSKGVVGREEIKTMVRRILVDEEGYEIRAKVKELQRSAQKAWTRESG 461 (484)
Q Consensus 382 GvP~v~~P~~~DQ~~na~rv~~~~G~g~~l~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~~~g 461 (484)
|+|+|+.+. ......+ ++.+.|+.++ .-+.+++.++|.+++.|++ .++ ++++.+++.. . ..
T Consensus 307 G~PvI~~~~----~~~~e~i-~~~~~g~~~~------~~d~~~l~~~i~~l~~~~~---~~~---~~~~~~~~~~-~-~~ 367 (406)
T 2gek_A 307 GTAVVASDL----DAFRRVL-ADGDAGRLVP------VDDADGMAAALIGILEDDQ---LRA---GYVARASERV-H-RY 367 (406)
T ss_dssp TCEEEECCC----HHHHHHH-TTTTSSEECC------TTCHHHHHHHHHHHHHCHH---HHH---HHHHHHHHHG-G-GG
T ss_pred CCCEEEecC----CcHHHHh-cCCCceEEeC------CCCHHHHHHHHHHHHcCHH---HHH---HHHHHHHHHH-H-hC
Confidence 999999755 4555555 5556777763 3478999999999999865 332 2333333333 3 44
Q ss_pred ChHHHHHHHHHHHhhhhh
Q 043859 462 SSYSSLARLAKECGMMTK 479 (484)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~ 479 (484)
+-...++++++-++++.+
T Consensus 368 s~~~~~~~~~~~~~~~~~ 385 (406)
T 2gek_A 368 DWSVVSAQIMRVYETVSG 385 (406)
T ss_dssp BHHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 555666666666666543
No 33
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.20 E-value=1.2e-09 Score=107.26 Aligned_cols=319 Identities=13% Similarity=0.050 Sum_probs=166.2
Q ss_pred CCCCeEEEEcCCCccChHHHHHHHHHHHhcCC-CeEEEEecCCCchhHHHHHhhhccCCCceEE-EecCCCCCCCCCCCC
Q 043859 5 SSKPHAVLLASPGVGHVIPVLELGKRLVTLYN-FQVTIFVVASQTSAAESKILQSAMSSKLCHV-IEIPAPDISGLVDPD 82 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P~l~La~~L~~r~G-h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~ 82 (484)
+++|||++++ ++.++......++++|++++| |+|+++++....+. .....+..+ +.. ..++... ..
T Consensus 6 ~~~mkIl~v~-~~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~------~~ 73 (375)
T 3beo_A 6 TERLKVMTIF-GTRPEAIKMAPLVLELQKHPEKIESIVTVTAQHRQM-LDQVLSIFG----ITPDFDLNIMK------DR 73 (375)
T ss_dssp SSCEEEEEEE-CSHHHHHHHHHHHHHHTTCTTTEEEEEEECCSSSHH-HHHHHHHHT----CCCSEECCCCC------TT
T ss_pred CcCceEEEEe-cCcHHHHHHHHHHHHHHhCCCCCCeEEEEcCCCHHH-HHHHHHHcC----CCCccccccCC------Cc
Confidence 4569999997 447788888899999987623 88888877654332 122233333 221 1222110 11
Q ss_pred chHHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCc-h--hhHHHHHHHhCCCeEEEecccHHHHHHHHhhcccccccc
Q 043859 83 AAVVTIISVIMREIKPAFRSAISALKTTPTALIVDLF-G--TESLAIAEELQIPKYVYVGTNAWCVALFVYAPTLDKTVQ 159 (484)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~-~--~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~ 159 (484)
.... .........+.+++++. +||+|++... . ..+..+|...|+|++.+....
T Consensus 74 ~~~~----~~~~~~~~~l~~~l~~~--~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~------------------ 129 (375)
T 3beo_A 74 QTLI----DITTRGLEGLDKVMKEA--KPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGL------------------ 129 (375)
T ss_dssp CCHH----HHHHHHHHHHHHHHHHH--CCSEEEEETTSHHHHHHHHHHHHTTCCEEEESCCC------------------
T ss_pred ccHH----HHHHHHHHHHHHHHHHh--CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccc------------------
Confidence 1111 11222344577888888 9999998532 2 223357788999987532110
Q ss_pred CccccCCccccCCCCCCCCcCCCCCccccCCchhHHHHHHhhhcccCccEEEEcChhhhcHHHHHHHhhccccCCCCCC-
Q 043859 160 GQYVVQNESFNIPGCRPLRPEDVVDPMLDRTNQQYFEYVHIGEEIPLSDGILVNTWEDLQPTALTALRDDKSLGRITKV- 238 (484)
Q Consensus 160 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~rp~~p- 238 (484)
.... .+.. ......+.. ..+.++.++..+-...+. +.. .+ .+
T Consensus 130 ---------------~~~~-------~~~~---~~~~~~~~~-~~~~~d~ii~~s~~~~~~-----~~~---~g---~~~ 172 (375)
T 3beo_A 130 ---------------RTWD-------KYSP---YPEEMNRQL-TGVMADLHFSPTAKSATN-----LQK---EN---KDE 172 (375)
T ss_dssp ---------------CCSC-------TTSS---TTHHHHHHH-HHHHCSEEEESSHHHHHH-----HHH---TT---CCG
T ss_pred ---------------cccc-------ccCC---ChhHhhhhH-HhhhhheeeCCCHHHHHH-----HHH---cC---CCc
Confidence 0000 0000 001111110 012255666655433221 111 11 22
Q ss_pred -CeEEeccc-cCC---CCCCCCccccccccCCCCCCeEEEEecCCCCCCCHHHHHHHHHHHhhC-----CCcEEEEEeCC
Q 043859 239 -PIYTVGPI-IRR---LGPAGSWNELFDWLDKQPSESVLYVSFGSGGTLTYEQITELAWGLELS-----QQRFIWVVRLP 308 (484)
Q Consensus 239 -~~~~vGpl-~~~---~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~ 308 (484)
++..+|.. ... ........++.+-+ +++++++++.|...... ..+..+++|++.+ +.+++ +...
T Consensus 173 ~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~---~~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i--~~~g 246 (375)
T 3beo_A 173 SRIFITGNTAIDALKTTVKETYSHPVLEKL---GNNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVV--YPVH 246 (375)
T ss_dssp GGEEECCCHHHHHHHHHCCSSCCCHHHHTT---TTSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEE--EECC
T ss_pred ccEEEECChhHhhhhhhhhhhhhHHHHHhc---cCCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEE--EeCC
Confidence 37777743 211 00000111221112 24567777888654222 2355566666432 33433 3211
Q ss_pred CCCCCCCCcccCCCCCCCCCccCCCchhHHHhhc-CCceEecCCcch---hhhccCCCccccccccCchhHHHHHhcCCc
Q 043859 309 NETTGDGSFFTAGSGAGDDDLSSLLPDGFLSRTL-DIGVVVPQWAPQ---IDILSHPSVGGFLSHCGWNSTLESITNGVP 384 (484)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~~v~v~~~ipq---~~vL~~~~~~~~ItHgG~gs~~eal~~GvP 384 (484)
.. ..+-+.+.+... .+++.+.+++++ .++|+.++ ++|+.+| +.+.||+++|+|
T Consensus 247 ~~--------------------~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad--~~v~~sg-~~~lEA~a~G~P 303 (375)
T 3beo_A 247 MN--------------------PVVRETANDILGDYGRIHLIEPLDVIDFHNVAARSY--LMLTDSG-GVQEEAPSLGVP 303 (375)
T ss_dssp SC--------------------HHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTCS--EEEECCH-HHHHHHHHHTCC
T ss_pred CC--------------------HHHHHHHHHHhhccCCEEEeCCCCHHHHHHHHHhCc--EEEECCC-ChHHHHHhcCCC
Confidence 00 000011222222 258888677754 46889999 6888764 458899999999
Q ss_pred eeecccccccchhHHHHHhhhcceEEeeecCCCCccCHHHHHHHHHHHhcccc
Q 043859 385 MIVWPLYSEQRMNATILTEELGVAIRSKVLPSKGVVGREEIKTMVRRILVDEE 437 (484)
Q Consensus 385 ~v~~P~~~DQ~~na~rv~~~~G~g~~l~~~~~~~~~~~~~l~~~i~~vl~~~~ 437 (484)
+|+....+.. ...+ +.|.|+.++ . ++++|.++|.++++|++
T Consensus 304 vi~~~~~~~~---~e~v--~~g~g~~v~------~-d~~~la~~i~~ll~~~~ 344 (375)
T 3beo_A 304 VLVLRDTTER---PEGI--EAGTLKLAG------T-DEETIFSLADELLSDKE 344 (375)
T ss_dssp EEECSSCCSC---HHHH--HTTSEEECC------S-CHHHHHHHHHHHHHCHH
T ss_pred EEEecCCCCC---ceee--cCCceEEcC------C-CHHHHHHHHHHHHhChH
Confidence 9998543333 2223 457887753 2 88999999999999865
No 34
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.12 E-value=1.3e-08 Score=103.91 Aligned_cols=114 Identities=16% Similarity=0.010 Sum_probs=72.8
Q ss_pred CceEecCCcchh---hhccCC----Cccccccc----cCchhHHHHHhcCCceeecccccccchhHHHHHhhhcceEEee
Q 043859 344 IGVVVPQWAPQI---DILSHP----SVGGFLSH----CGWNSTLESITNGVPMIVWPLYSEQRMNATILTEELGVAIRSK 412 (484)
Q Consensus 344 ~~v~v~~~ipq~---~vL~~~----~~~~~ItH----gG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~g~~l~ 412 (484)
+++.+.+++|+. ++|..+ + ++|.- |--.++.||+++|+|+|+... ......+ ++-..|+.++
T Consensus 335 ~~V~~~G~v~~~~~~~~~~~a~~~~d--v~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v-~~~~~g~l~~ 407 (499)
T 2r60_A 335 GKVSMFPLNSQQELAGCYAYLASKGS--VFALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEIL-DGGKYGVLVD 407 (499)
T ss_dssp TTEEEEECCSHHHHHHHHHHHHHTTC--EEEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHT-GGGTSSEEEC
T ss_pred ceEEECCCCCHHHHHHHHHhcCcCCC--EEEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHh-cCCceEEEeC
Confidence 478888999754 578888 8 45532 334589999999999998753 3445554 4545777764
Q ss_pred ecCCCCccCHHHHHHHHHHHhcccc-hHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHhhhh
Q 043859 413 VLPSKGVVGREEIKTMVRRILVDEE-GYEIRAKVKELQRSAQKAWTRESGSSYSSLARLAKECGMMT 478 (484)
Q Consensus 413 ~~~~~~~~~~~~l~~~i~~vl~~~~-~~~~~~~a~~l~~~~~~a~~~~~g~~~~~~~~~~~~~~~~~ 478 (484)
.-+.+++.++|.++++|++ .+.+.+++++. + .+..+-...++++++-++++.
T Consensus 408 ------~~d~~~la~~i~~ll~~~~~~~~~~~~a~~~-------~-~~~fs~~~~~~~~~~~y~~~~ 460 (499)
T 2r60_A 408 ------PEDPEDIARGLLKAFESEETWSAYQEKGKQR-------V-EERYTWQETARGYLEVIQEIA 460 (499)
T ss_dssp ------TTCHHHHHHHHHHHHSCHHHHHHHHHHHHHH-------H-HHHSBHHHHHHHHHHHHHHHH
T ss_pred ------CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHH-------H-HHhCCHHHHHHHHHHHHHHHH
Confidence 3488999999999999865 12233333322 2 222344445555555555554
No 35
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.11 E-value=5.6e-08 Score=95.98 Aligned_cols=354 Identities=12% Similarity=0.045 Sum_probs=178.8
Q ss_pred CCeEEEEcCCC-ccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCCCCCCCCCchH
Q 043859 7 KPHAVLLASPG-VGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDISGLVDPDAAV 85 (484)
Q Consensus 7 ~~~il~~~~p~-~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 85 (484)
++++....+|. -|.-.-...|++.|.++ ||+|++++...... .... ..++.+..++....... ......
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~-G~~V~v~~~~~~~~------~~~~--~~~i~~~~~~~~~~~~~-~~~~~~ 84 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAER-GHEIHFITSGLPFR------LNKV--YPNIYFHEVTVNQYSVF-QYPPYD 84 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHT-TCEEEEECSSCC----------CC--CTTEEEECCCCC----C-CSCCHH
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhC-CCEEEEEeCCCCCc------cccc--CCceEEEeccccccccc-cccccc
Confidence 45788888875 45667778999999999 99999999864211 0111 12466665553222111 111100
Q ss_pred HHHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCchhh--HHHHHHH-h--CCCeEEEecccHHHHHHHHhhccccccccC
Q 043859 86 VTIISVIMREIKPAFRSAISALKTTPTALIVDLFGTE--SLAIAEE-L--QIPKYVYVGTNAWCVALFVYAPTLDKTVQG 160 (484)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~~~~--~~~~A~~-l--gIP~v~~~~~~~~~~~~~~~~p~~~~~~~~ 160 (484)
......+.+++++. +||+|++...... ...++.. + ++|+|......... .
T Consensus 85 --------~~~~~~l~~~l~~~--~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~---------~------ 139 (394)
T 2jjm_A 85 --------LALASKMAEVAQRE--NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDIT---------V------ 139 (394)
T ss_dssp --------HHHHHHHHHHHHHH--TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHH---------T------
T ss_pred --------HHHHHHHHHHHHHc--CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCccc---------c------
Confidence 11234566777888 9999998743322 2334444 3 59987654332100 0
Q ss_pred ccccCCccccCCCCCCCCcCCCCCccccCCchhHHHHHHhhhcccCccEEEEcChhhhcHHHHHHHhhccccCCCCCCCe
Q 043859 161 QYVVQNESFNIPGCRPLRPEDVVDPMLDRTNQQYFEYVHIGEEIPLSDGILVNTWEDLQPTALTALRDDKSLGRITKVPI 240 (484)
Q Consensus 161 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~rp~~p~~ 240 (484)
.+. ...+....+. .++.++.++..+....+. +... ++ + -.++
T Consensus 140 -----------~~~----------------~~~~~~~~~~--~~~~ad~ii~~s~~~~~~-----~~~~--~~-~-~~~~ 181 (394)
T 2jjm_A 140 -----------LGS----------------DPSLNNLIRF--GIEQSDVVTAVSHSLINE-----THEL--VK-P-NKDI 181 (394)
T ss_dssp -----------TTT----------------CTTTHHHHHH--HHHHSSEEEESCHHHHHH-----HHHH--TC-C-SSCE
T ss_pred -----------cCC----------------CHHHHHHHHH--HHhhCCEEEECCHHHHHH-----HHHh--hC-C-cccE
Confidence 000 0001111111 134466777666443221 1111 11 0 1235
Q ss_pred EEeccccCCCC-CCCCccccccccCCCCCCeEEEEecCCCCCCCHHHHHHHHHHHhh----CCCcEEEEEeCCCCCCCCC
Q 043859 241 YTVGPIIRRLG-PAGSWNELFDWLDKQPSESVLYVSFGSGGTLTYEQITELAWGLEL----SQQRFIWVVRLPNETTGDG 315 (484)
Q Consensus 241 ~~vGpl~~~~~-~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~----~~~~~i~~~~~~~~~~~~~ 315 (484)
..+...+.... .........+-++-. ++..+++..|.... ...+..++++++. .+.++++ ++..
T Consensus 182 ~vi~ngv~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i-~G~g------- 250 (394)
T 2jjm_A 182 QTVYNFIDERVYFKRDMTQLKKEYGIS-ESEKILIHISNFRK--VKRVQDVVQAFAKIVTEVDAKLLL-VGDG------- 250 (394)
T ss_dssp EECCCCCCTTTCCCCCCHHHHHHTTCC----CEEEEECCCCG--GGTHHHHHHHHHHHHHSSCCEEEE-ECCC-------
T ss_pred EEecCCccHHhcCCcchHHHHHHcCCC-CCCeEEEEeecccc--ccCHHHHHHHHHHHHhhCCCEEEE-ECCc-------
Confidence 55554332211 001111222222211 22245556677532 2234444454433 2444333 3211
Q ss_pred CcccCCCCCCCCCccCCCchhHHHhhc----CCceEecCCcch-hhhccCCCccccc----cccCchhHHHHHhcCCcee
Q 043859 316 SFFTAGSGAGDDDLSSLLPDGFLSRTL----DIGVVVPQWAPQ-IDILSHPSVGGFL----SHCGWNSTLESITNGVPMI 386 (484)
Q Consensus 316 ~~~~~~~~~~~~~~~~~lp~~~~~~~~----~~~v~v~~~ipq-~~vL~~~~~~~~I----tHgG~gs~~eal~~GvP~v 386 (484)
...+.+.+... .+++.+.++..+ .++|..++ ++| .-|.-+++.||+++|+|+|
T Consensus 251 ----------------~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~ad--v~v~ps~~e~~~~~~~EAma~G~PvI 312 (394)
T 2jjm_A 251 ----------------PEFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSD--LMLLLSEKESFGLVLLEAMACGVPCI 312 (394)
T ss_dssp ----------------TTHHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCS--EEEECCSCCSCCHHHHHHHHTTCCEE
T ss_pred ----------------hHHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCC--EEEeccccCCCchHHHHHHhcCCCEE
Confidence 01122332222 246777777654 46899999 566 4566779999999999999
Q ss_pred ecccccccchhHHHHHhhhcceEEeeecCCCCccCHHHHHHHHHHHhcccc-hHHHHHHHHHHHHHHHHhhhcCCCChHH
Q 043859 387 VWPLYSEQRMNATILTEELGVAIRSKVLPSKGVVGREEIKTMVRRILVDEE-GYEIRAKVKELQRSAQKAWTRESGSSYS 465 (484)
Q Consensus 387 ~~P~~~DQ~~na~rv~~~~G~g~~l~~~~~~~~~~~~~l~~~i~~vl~~~~-~~~~~~~a~~l~~~~~~a~~~~~g~~~~ 465 (484)
+.+.. .....+ ++.+.|+.++ .-+.+++.++|.+++.|++ .+.+.+++++.. .+..+-..
T Consensus 313 ~~~~~----~~~e~v-~~~~~g~~~~------~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~--------~~~~s~~~ 373 (394)
T 2jjm_A 313 GTRVG----GIPEVI-QHGDTGYLCE------VGDTTGVADQAIQLLKDEELHRNMGERARESV--------YEQFRSEK 373 (394)
T ss_dssp EECCT----TSTTTC-CBTTTEEEEC------TTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH--------HHHSCHHH
T ss_pred EecCC----ChHHHh-hcCCceEEeC------CCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHH--------HHhCCHHH
Confidence 97643 333444 4555777764 3478999999999999865 222333333322 22345556
Q ss_pred HHHHHHHHHhhhhhcC
Q 043859 466 SLARLAKECGMMTKRN 481 (484)
Q Consensus 466 ~~~~~~~~~~~~~~~~ 481 (484)
.++++++-++++.+++
T Consensus 374 ~~~~~~~~~~~~~~~~ 389 (394)
T 2jjm_A 374 IVSQYETIYYDVLRDD 389 (394)
T ss_dssp HHHHHHHHHHHTC---
T ss_pred HHHHHHHHHHHHHhhh
Confidence 6777777777765443
No 36
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.08 E-value=5.8e-08 Score=94.89 Aligned_cols=95 Identities=13% Similarity=0.158 Sum_probs=69.2
Q ss_pred CceEecCCcch-hhhccCCCcccccc----ccCchhHHHHHhcCCceeecccccccchhHHHHHhhhcceEEeeecCCCC
Q 043859 344 IGVVVPQWAPQ-IDILSHPSVGGFLS----HCGWNSTLESITNGVPMIVWPLYSEQRMNATILTEELGVAIRSKVLPSKG 418 (484)
Q Consensus 344 ~~v~v~~~ipq-~~vL~~~~~~~~It----HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~g~~l~~~~~~~ 418 (484)
+++.+.++..+ .+++..++ ++|. -|..+++.||+++|+|+|+... ..+...+ ++.+.|..+. .
T Consensus 253 ~~v~~~g~~~~~~~~~~~ad--~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i-~~~~~g~~~~-----~ 320 (374)
T 2iw1_A 253 SNVHFFSGRNDVSELMAAAD--LLLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYI-ADANCGTVIA-----E 320 (374)
T ss_dssp GGEEEESCCSCHHHHHHHCS--EEEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHH-HHHTCEEEEC-----S
T ss_pred CcEEECCCcccHHHHHHhcC--EEEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhh-ccCCceEEeC-----C
Confidence 57888888654 56899999 4654 4667799999999999999765 3456666 5778888874 2
Q ss_pred ccCHHHHHHHHHHHhcccc-hHHHHHHHHHHHH
Q 043859 419 VVGREEIKTMVRRILVDEE-GYEIRAKVKELQR 450 (484)
Q Consensus 419 ~~~~~~l~~~i~~vl~~~~-~~~~~~~a~~l~~ 450 (484)
.-+.+++.++|.++++|++ .+.+.+++++..+
T Consensus 321 ~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~ 353 (374)
T 2iw1_A 321 PFSQEQLNEVLRKALTQSPLRMAWAENARHYAD 353 (374)
T ss_dssp SCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHcChHHHHHHHHHHHHHHH
Confidence 4589999999999999865 2334444444433
No 37
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.07 E-value=4.4e-09 Score=101.82 Aligned_cols=124 Identities=15% Similarity=0.026 Sum_probs=79.2
Q ss_pred EEecCCCCCCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCCCCCCcccCCCCCCCCCccCCCchhHHHhhcCCceEecCCc
Q 043859 273 YVSFGSGGTLTYEQITELAWGLELSQQRFIWVVRLPNETTGDGSFFTAGSGAGDDDLSSLLPDGFLSRTLDIGVVVPQWA 352 (484)
Q Consensus 273 ~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~i 352 (484)
++..|+.. ....+..++++++.++.+++++-.++ ....+ ..+.++.. +++.+.+|+
T Consensus 165 i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~G~g~--------------------~~~~l-~~~~~~~~-~~v~~~g~~ 220 (342)
T 2iuy_A 165 LLFMGRVS--PHKGALEAAAFAHACGRRLVLAGPAW--------------------EPEYF-DEITRRYG-STVEPIGEV 220 (342)
T ss_dssp EEEESCCC--GGGTHHHHHHHHHHHTCCEEEESCCC--------------------CHHHH-HHHHHHHT-TTEEECCCC
T ss_pred EEEEeccc--cccCHHHHHHHHHhcCcEEEEEeCcc--------------------cHHHH-HHHHHHhC-CCEEEeccC
Confidence 34457653 23446777777777777755542110 00000 11222233 689999999
Q ss_pred chh---hhccCCCccccc--cc-----------cC-chhHHHHHhcCCceeecccccccchhHHHHHhh--hcceEEeee
Q 043859 353 PQI---DILSHPSVGGFL--SH-----------CG-WNSTLESITNGVPMIVWPLYSEQRMNATILTEE--LGVAIRSKV 413 (484)
Q Consensus 353 pq~---~vL~~~~~~~~I--tH-----------gG-~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~--~G~g~~l~~ 413 (484)
++. +++..+++ +| +. -| -+++.||+++|+|+|+... ..+...+ ++ -+.|+.+
T Consensus 221 ~~~~l~~~~~~adv--~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~-~~~~~~~g~~~-- 291 (342)
T 2iuy_A 221 GGERRLDLLASAHA--VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIV-PSVGEVVGYGT-- 291 (342)
T ss_dssp CHHHHHHHHHHCSE--EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHG-GGGEEECCSSS--
T ss_pred CHHHHHHHHHhCCE--EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHh-cccCCCceEEc--
Confidence 875 68999995 54 22 23 4589999999999999865 3455555 45 4566654
Q ss_pred cCCCCccCHHHHHHHHHHHhc
Q 043859 414 LPSKGVVGREEIKTMVRRILV 434 (484)
Q Consensus 414 ~~~~~~~~~~~l~~~i~~vl~ 434 (484)
.. +.+++.++|.++++
T Consensus 292 ----~~-d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 292 ----DF-APDEARRTLAGLPA 307 (342)
T ss_dssp ----CC-CHHHHHHHHHTSCC
T ss_pred ----CC-CHHHHHHHHHHHHH
Confidence 34 89999999999987
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.94 E-value=4.6e-07 Score=90.03 Aligned_cols=112 Identities=17% Similarity=0.037 Sum_probs=72.4
Q ss_pred CCceEecCCcc---h---hhhccCCCcccccccc----CchhHHHHHhcCCceeecccccccchhHHHHHhhhcceEEee
Q 043859 343 DIGVVVPQWAP---Q---IDILSHPSVGGFLSHC----GWNSTLESITNGVPMIVWPLYSEQRMNATILTEELGVAIRSK 412 (484)
Q Consensus 343 ~~~v~v~~~ip---q---~~vL~~~~~~~~ItHg----G~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~g~~l~ 412 (484)
.+++.+.+|++ + .++|..++ ++|.-. .-+++.||+++|+|+|+.+. ..+...+ ++.+.|..+
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad--~~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i-~~~~~g~l~- 363 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASD--VILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQI-VDGETGFLV- 363 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCS--EEEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHC-CBTTTEEEE-
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCC--EEEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhhe-ecCCCeEEE-
Confidence 35788888775 2 35788899 455443 45689999999999999764 3455555 455677764
Q ss_pred ecCCCCccCHHHHHHHHHHHhcccc-hHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHhhh
Q 043859 413 VLPSKGVVGREEIKTMVRRILVDEE-GYEIRAKVKELQRSAQKAWTRESGSSYSSLARLAKECGMM 477 (484)
Q Consensus 413 ~~~~~~~~~~~~l~~~i~~vl~~~~-~~~~~~~a~~l~~~~~~a~~~~~g~~~~~~~~~~~~~~~~ 477 (484)
. +.+++.++|.++++|++ .+.+.+++++.. .+..+-...++++++-+.++
T Consensus 364 -----~--d~~~la~~i~~ll~~~~~~~~~~~~a~~~~--------~~~fs~~~~~~~~~~~~~~l 414 (416)
T 2x6q_A 364 -----R--DANEAVEVVLYLLKHPEVSKEMGAKAKERV--------RKNFIITKHMERYLDILNSL 414 (416)
T ss_dssp -----S--SHHHHHHHHHHHHHCHHHHHHHHHHHHHHH--------HHHTBHHHHHHHHHHHHHTC
T ss_pred -----C--CHHHHHHHHHHHHhCHHHHHHHHHHHHHHH--------HHHcCHHHHHHHHHHHHHHh
Confidence 3 88999999999999865 122333333222 22234455566666555544
No 39
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.93 E-value=1.8e-08 Score=98.98 Aligned_cols=314 Identities=12% Similarity=0.060 Sum_probs=170.0
Q ss_pred CeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCch-hHHHHHhhhccCCCceEEEecCCCCCCCCCCCCchHH
Q 043859 8 PHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTS-AAESKILQSAMSSKLCHVIEIPAPDISGLVDPDAAVV 86 (484)
Q Consensus 8 ~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 86 (484)
|--+++-++++-.+.-+..|.++|.++ ++..++.+..-.+ .+....++.++ + .-|...++. . +.+.
T Consensus 9 ~~~~~~v~GtRpe~~k~~p~~~~l~~~--~~~~~~~tgqh~~~~~~~~~~~~~~----i---~~~~~~l~~--~-~~~~- 75 (385)
T 4hwg_A 9 MLKVMTIVGTRPELIKLCCVISEFDKH--TKHILVHTGQNYAYELNQVFFDDMG----I---RKPDYFLEV--A-ADNT- 75 (385)
T ss_dssp CCEEEEEECSHHHHHHHHHHHHHHHHH--SEEEEEECSCHHHHHHTHHHHC-CC----C---CCCSEECCC--C-CCCS-
T ss_pred hhheeEEEEcCHhHHHHHHHHHHHHhc--CCEEEEEeCCCCChhHHHHHHhhCC----C---CCCceecCC--C-CCCH-
Confidence 444566678888888899999999875 8888777775332 22222323333 1 011111110 1 1111
Q ss_pred HHHHHHHHHhhHHHHHHHHhcCCCCeEEEe--CCchhhHHHHHHHhCCCeEEEecccHHHHHHHHhhccccccccCcccc
Q 043859 87 TIISVIMREIKPAFRSAISALKTTPTALIV--DLFGTESLAIAEELQIPKYVYVGTNAWCVALFVYAPTLDKTVQGQYVV 164 (484)
Q Consensus 87 ~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~--D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 164 (484)
..........+.+++++. +||+||+ |....++..+|.++|||++.+.. +.
T Consensus 76 ---~~~~~~~~~~l~~~l~~~--kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~ea-gl---------------------- 127 (385)
T 4hwg_A 76 ---AKSIGLVIEKVDEVLEKE--KPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEA-GN---------------------- 127 (385)
T ss_dssp ---HHHHHHHHHHHHHHHHHH--CCSEEEEESCSGGGGGHHHHHHTTCCEEEESC-CC----------------------
T ss_pred ---HHHHHHHHHHHHHHHHhc--CCcEEEEECCchHHHHHHHHHHhCCCEEEEeC-CC----------------------
Confidence 233444566788899999 9999886 43444457899999999665432 10
Q ss_pred CCccccCCCCCCCCcCCCCCccccCC-chhHHHHHHhhhcccCccEEEEcChhhhcHHHHHHHhhccccCCCCCC--CeE
Q 043859 165 QNESFNIPGCRPLRPEDVVDPMLDRT-NQQYFEYVHIGEEIPLSDGILVNTWEDLQPTALTALRDDKSLGRITKV--PIY 241 (484)
Q Consensus 165 ~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~rp~~p--~~~ 241 (484)
.. +.... ....+..... -++.++..+-..-+ .+.. .+ .+ +++
T Consensus 128 ----------rs---------~~~~~pee~nR~~~~~-----~a~~~~~~te~~~~-----~l~~---~G---~~~~~I~ 172 (385)
T 4hwg_A 128 ----------RC---------FDQRVPEEINRKIIDH-----ISDVNITLTEHARR-----YLIA---EG---LPAELTF 172 (385)
T ss_dssp ----------CC---------SCTTSTHHHHHHHHHH-----HCSEEEESSHHHHH-----HHHH---TT---CCGGGEE
T ss_pred ----------cc---------ccccCcHHHHHHHHHh-----hhceeecCCHHHHH-----HHHH---cC---CCcCcEE
Confidence 00 00000 0011111111 13344444432211 1111 11 22 388
Q ss_pred EeccccCCCC----CCCCccccccccCCCCCCeEEEEecCCCCCCC-HHHHHHHHHHHhhC----CCcEEEEEeCCCCCC
Q 043859 242 TVGPIIRRLG----PAGSWNELFDWLDKQPSESVLYVSFGSGGTLT-YEQITELAWGLELS----QQRFIWVVRLPNETT 312 (484)
Q Consensus 242 ~vGpl~~~~~----~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~-~~~~~~~~~al~~~----~~~~i~~~~~~~~~~ 312 (484)
++|-...+.. +.....++.+.++-. +++.|+++.|...... .+.+..+++|+..+ +.++|+...+.
T Consensus 173 vtGnp~~D~~~~~~~~~~~~~~~~~lgl~-~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~---- 247 (385)
T 4hwg_A 173 KSGSHMPEVLDRFMPKILKSDILDKLSLT-PKQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPR---- 247 (385)
T ss_dssp ECCCSHHHHHHHHHHHHHHCCHHHHTTCC-TTSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHH----
T ss_pred EECCchHHHHHHhhhhcchhHHHHHcCCC-cCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChH----
Confidence 8994332200 000112233333322 3568899888653322 13456677776542 56777765211
Q ss_pred CCCCcccCCCCCCCCCccCCCchhHHHh---hc-CCceEecCCcc---hhhhccCCCccccccccCchhHHHHHhcCCce
Q 043859 313 GDGSFFTAGSGAGDDDLSSLLPDGFLSR---TL-DIGVVVPQWAP---QIDILSHPSVGGFLSHCGWNSTLESITNGVPM 385 (484)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~lp~~~~~~---~~-~~~v~v~~~ip---q~~vL~~~~~~~~ItHgG~gs~~eal~~GvP~ 385 (484)
+-+.+.+. .. .+++.+.+.++ ...++++++ ++||-.|. .+.||.+.|+|+
T Consensus 248 --------------------~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~ad--lvvt~SGg-v~~EA~alG~Pv 304 (385)
T 4hwg_A 248 --------------------TKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAF--CILSDSGT-ITEEASILNLPA 304 (385)
T ss_dssp --------------------HHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCS--EEEECCTT-HHHHHHHTTCCE
T ss_pred --------------------HHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCc--EEEECCcc-HHHHHHHcCCCE
Confidence 00111111 11 24777766554 457899999 79998876 469999999999
Q ss_pred eecccccccchhHHHHHhhhcceEEeeecCCCCccCHHHHHHHHHHHhcccc
Q 043859 386 IVWPLYSEQRMNATILTEELGVAIRSKVLPSKGVVGREEIKTMVRRILVDEE 437 (484)
Q Consensus 386 v~~P~~~DQ~~na~rv~~~~G~g~~l~~~~~~~~~~~~~l~~~i~~vl~~~~ 437 (484)
|.++...+.+. .+ +.|.++.+. .++++|.+++.++|+|+.
T Consensus 305 v~~~~~ter~e---~v--~~G~~~lv~-------~d~~~i~~ai~~ll~d~~ 344 (385)
T 4hwg_A 305 LNIREAHERPE---GM--DAGTLIMSG-------FKAERVLQAVKTITEEHD 344 (385)
T ss_dssp EECSSSCSCTH---HH--HHTCCEECC-------SSHHHHHHHHHHHHTTCB
T ss_pred EEcCCCccchh---hh--hcCceEEcC-------CCHHHHHHHHHHHHhChH
Confidence 99986544222 23 568776653 379999999999999865
No 40
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.54 E-value=0.00017 Score=74.43 Aligned_cols=120 Identities=13% Similarity=0.126 Sum_probs=76.3
Q ss_pred CceEecCCcch---hhhccCCCccccc---cccCchhHHHHHhcCCceeecccccccchh-HHHHHhhhcceEEeeecCC
Q 043859 344 IGVVVPQWAPQ---IDILSHPSVGGFL---SHCGWNSTLESITNGVPMIVWPLYSEQRMN-ATILTEELGVAIRSKVLPS 416 (484)
Q Consensus 344 ~~v~v~~~ipq---~~vL~~~~~~~~I---tHgG~gs~~eal~~GvP~v~~P~~~DQ~~n-a~rv~~~~G~g~~l~~~~~ 416 (484)
++|.+.+++|+ .+++..+++ || ..|+-++++||+++|+|+|++|-..=.-.. +..+ +..|+.-.+.
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l-~~~g~~e~v~---- 506 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLN-HHLGLDEMNV---- 506 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHH-HHHTCGGGBC----
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHH-HHCCChhhhc----
Confidence 57888899974 357889994 54 126677999999999999998743111111 2333 4556654442
Q ss_pred CCccCHHHHHHHHHHHhcccc-hHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHhhhhh
Q 043859 417 KGVVGREEIKTMVRRILVDEE-GYEIRAKVKELQRSAQKAWTRESGSSYSSLARLAKECGMMTK 479 (484)
Q Consensus 417 ~~~~~~~~l~~~i~~vl~~~~-~~~~~~~a~~l~~~~~~a~~~~~g~~~~~~~~~~~~~~~~~~ 479 (484)
. +.+++.+++.+++.|++ .+.+++++++.... .+..+....++++.+-++++..
T Consensus 507 -~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~------~~~f~~~~~~~~~~~~y~~~~~ 561 (568)
T 2vsy_A 507 -A--DDAAFVAKAVALASDPAALTALHARVDVLRRA------SGVFHMDGFADDFGALLQALAR 561 (568)
T ss_dssp -S--SHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH------SSTTCHHHHHHHHHHHHHHHHH
T ss_pred -C--CHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhc------CCCCCHHHHHHHHHHHHHHHHH
Confidence 2 88999999999999865 12233333322211 3445666666777766666543
No 41
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.45 E-value=1.8e-05 Score=84.38 Aligned_cols=81 Identities=10% Similarity=0.019 Sum_probs=54.7
Q ss_pred CceEecCC----cchhhhcc----CCCccccccc----cCchhHHHHHhcCCceeecccccccchhHHHHHhhhcceEEe
Q 043859 344 IGVVVPQW----APQIDILS----HPSVGGFLSH----CGWNSTLESITNGVPMIVWPLYSEQRMNATILTEELGVAIRS 411 (484)
Q Consensus 344 ~~v~v~~~----ipq~~vL~----~~~~~~~ItH----gG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~g~~l 411 (484)
+++.+.++ ++..++.. .++ ++|.- |--.++.||+++|+|+|+. |-......+ ++-..|+.+
T Consensus 640 ~~V~flG~~~~~v~~~eL~~~~~~aaD--vfV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV-~dg~~Gllv 712 (816)
T 3s28_A 640 GQFRWISSQMDRVRNGELYRYICDTKG--AFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEII-VHGKSGFHI 712 (816)
T ss_dssp BBEEEECCCCCHHHHHHHHHHHHHTTC--EEEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHC-CBTTTBEEE
T ss_pred CcEEEccCccccCCHHHHHHHHHhcCe--EEEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHH-ccCCcEEEe
Confidence 57777764 44444443 456 45532 3456899999999999996 445555555 455678776
Q ss_pred eecCCCCccCHHHHHHHHHHHh----cccc
Q 043859 412 KVLPSKGVVGREEIKTMVRRIL----VDEE 437 (484)
Q Consensus 412 ~~~~~~~~~~~~~l~~~i~~vl----~~~~ 437 (484)
+ .-+.++++++|.+++ .|++
T Consensus 713 ~------p~D~e~LA~aI~~lL~~Ll~d~~ 736 (816)
T 3s28_A 713 D------PYHGDQAADTLADFFTKCKEDPS 736 (816)
T ss_dssp C------TTSHHHHHHHHHHHHHHHHHCTH
T ss_pred C------CCCHHHHHHHHHHHHHHhccCHH
Confidence 4 347889999997776 6655
No 42
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.39 E-value=5.1e-05 Score=76.80 Aligned_cols=113 Identities=12% Similarity=0.030 Sum_probs=73.5
Q ss_pred CceE-ecCCcch--hhhccCCCcccccc----ccCchhHHHHHhcCCceeecccccccchhHHHHHhhh---------cc
Q 043859 344 IGVV-VPQWAPQ--IDILSHPSVGGFLS----HCGWNSTLESITNGVPMIVWPLYSEQRMNATILTEEL---------GV 407 (484)
Q Consensus 344 ~~v~-v~~~ipq--~~vL~~~~~~~~It----HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~---------G~ 407 (484)
.++. +..+-.. .+++..++ ++|. -|--.+++||+++|+|+|+... ......+ ++- +.
T Consensus 346 ~~v~~~~g~~~~~~~~~~~~ad--v~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~ 418 (485)
T 1rzu_A 346 GRVGVAIGYNEPLSHLMQAGCD--AIIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTV-IDANHAALASKAAT 418 (485)
T ss_dssp TTEEEEESCCHHHHHHHHHHCS--EEEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCC
T ss_pred CcEEEecCCCHHHHHHHHhcCC--EEEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhhee-cccccccccccCCc
Confidence 4676 5677433 26889999 4552 2345689999999999999754 3444444 343 57
Q ss_pred eEEeeecCCCCccCHHHHHHHHHHHh---cccchHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHhhhhh
Q 043859 408 AIRSKVLPSKGVVGREEIKTMVRRIL---VDEEGYEIRAKVKELQRSAQKAWTRESGSSYSSLARLAKECGMMTK 479 (484)
Q Consensus 408 g~~l~~~~~~~~~~~~~l~~~i~~vl---~~~~~~~~~~~a~~l~~~~~~a~~~~~g~~~~~~~~~~~~~~~~~~ 479 (484)
|+.++ .-+.+++.++|.+++ .|++ .+ +++++.++ .+..+-...++++++-.+++..
T Consensus 419 G~l~~------~~d~~~la~~i~~ll~~~~~~~---~~---~~~~~~~~----~~~fs~~~~~~~~~~~y~~~~~ 477 (485)
T 1rzu_A 419 GVQFS------PVTLDGLKQAIRRTVRYYHDPK---LW---TQMQKLGM----KSDVSWEKSAGLYAALYSQLIS 477 (485)
T ss_dssp BEEES------SCSHHHHHHHHHHHHHHHTCHH---HH---HHHHHHHH----TCCCBHHHHHHHHHHHHHHHTC
T ss_pred ceEeC------CCCHHHHHHHHHHHHHHhCCHH---HH---HHHHHHHH----HHhCChHHHHHHHHHHHHHhhC
Confidence 77764 347899999999999 5654 32 23333322 3456666677777776666643
No 43
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.38 E-value=5.5e-05 Score=74.74 Aligned_cols=112 Identities=11% Similarity=0.081 Sum_probs=71.6
Q ss_pred eEecCCcchh---hhccCCCcccccc----ccCchhHHHHHhcCCceeecccccccchhHHHHHhhhcc-----------
Q 043859 346 VVVPQWAPQI---DILSHPSVGGFLS----HCGWNSTLESITNGVPMIVWPLYSEQRMNATILTEELGV----------- 407 (484)
Q Consensus 346 v~v~~~ipq~---~vL~~~~~~~~It----HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~----------- 407 (484)
+.+.+|+++. ++|..+++ +|. -|.-.++.||+++|+|+|+.... .....+ ++ |.
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~e~v-~~-~~~~~i~~~~~~~ 327 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GADDYF-SG-DCVYKIKPSAWIS 327 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHHHHS-CT-TTSEEECCCEEEE
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChHHHH-cc-Ccccccccccccc
Confidence 6677999843 57889994 552 23345899999999999996532 333333 12 22
Q ss_pred -----eE--EeeecCCCCccCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHhhhhh
Q 043859 408 -----AI--RSKVLPSKGVVGREEIKTMVRRILVDEEGYEIRAKVKELQRSAQKAWTRESGSSYSSLARLAKECGMMTK 479 (484)
Q Consensus 408 -----g~--~l~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~~~g~~~~~~~~~~~~~~~~~~ 479 (484)
|+ .+. .-+.+++.++| +++.|++ .+ +++++.+++.+ .+..+-...++++++-++++.+
T Consensus 328 ~~~~~G~~gl~~------~~d~~~la~~i-~l~~~~~---~~---~~~~~~a~~~~-~~~fs~~~~~~~~~~~~~~~~~ 392 (413)
T 3oy2_A 328 VDDRDGIGGIEG------IIDVDDLVEAF-TFFKDEK---NR---KEYGKRVQDFV-KTKPTWDDISSDIIDFFNSLLR 392 (413)
T ss_dssp CTTTCSSCCEEE------ECCHHHHHHHH-HHTTSHH---HH---HHHHHHHHHHH-TTSCCHHHHHHHHHHHHHHHTC
T ss_pred cccccCcceeeC------CCCHHHHHHHH-HHhcCHH---HH---HHHHHHHHHHH-HHhCCHHHHHHHHHHHHHHHHh
Confidence 33 443 23899999999 9999865 33 23333333333 4556677777777777766653
No 44
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.34 E-value=0.00012 Score=71.49 Aligned_cols=96 Identities=18% Similarity=0.262 Sum_probs=67.4
Q ss_pred ceEecCCcch-hhhccCCCcccccc--c--cCchhHHHHHhcCCceeecccccccchhHHHHHhhhcceEEeeecCCCCc
Q 043859 345 GVVVPQWAPQ-IDILSHPSVGGFLS--H--CGWNSTLESITNGVPMIVWPLYSEQRMNATILTEELGVAIRSKVLPSKGV 419 (484)
Q Consensus 345 ~v~v~~~ipq-~~vL~~~~~~~~It--H--gG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~g~~l~~~~~~~~ 419 (484)
++.+.++... ..+++.+++ +|+. . +|..+++||+++|+|+|+-|..++.+.....+ .+.|.++...
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv-~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~-~~~G~l~~~~------- 331 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI-AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFL-EKEGAGFEVK------- 331 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE-EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHH-HHTTCEEECC-------
T ss_pred cEEEECCHHHHHHHHHhCCE-EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHH-HHCCCEEEeC-------
Confidence 4555565544 568999994 2331 1 24478999999999999877777777766655 3567776542
Q ss_pred cCHHHHHHHHHHHhcccc-hHHHHHHHHHHHHH
Q 043859 420 VGREEIKTMVRRILVDEE-GYEIRAKVKELQRS 451 (484)
Q Consensus 420 ~~~~~l~~~i~~vl~~~~-~~~~~~~a~~l~~~ 451 (484)
+.+++.++|.++|+| + -+.+.+++++..+.
T Consensus 332 -d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~ 362 (374)
T 2xci_A 332 -NETELVTKLTELLSV-KKEIKVEEKSREIKGC 362 (374)
T ss_dssp -SHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHh
Confidence 779999999999988 4 34477777666555
No 45
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.30 E-value=0.0002 Score=72.30 Aligned_cols=115 Identities=12% Similarity=-0.033 Sum_probs=73.2
Q ss_pred CceE-ecCCcch--hhhccCCCccccccc----cCchhHHHHHhcCCceeecccccccchhHHHHHhhh---------cc
Q 043859 344 IGVV-VPQWAPQ--IDILSHPSVGGFLSH----CGWNSTLESITNGVPMIVWPLYSEQRMNATILTEEL---------GV 407 (484)
Q Consensus 344 ~~v~-v~~~ipq--~~vL~~~~~~~~ItH----gG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~---------G~ 407 (484)
.++. +..+... .++|..+++ +|.- |.-.+++||+++|+|+|+... ......+ ++- +.
T Consensus 347 ~~v~~~~g~~~~~~~~~~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~ 419 (485)
T 2qzs_A 347 GQVGVQIGYHEAFSHRIMGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTV-SDCSLENLADGVAS 419 (485)
T ss_dssp TTEEEEESCCHHHHHHHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCC
T ss_pred CcEEEeCCCCHHHHHHHHHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCcccee-ccCccccccccccc
Confidence 4675 6677433 368899994 5522 334588999999999999754 3444444 343 57
Q ss_pred eEEeeecCCCCccCHHHHHHHHHHHh---cccchHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHhhhhhcC
Q 043859 408 AIRSKVLPSKGVVGREEIKTMVRRIL---VDEEGYEIRAKVKELQRSAQKAWTRESGSSYSSLARLAKECGMMTKRN 481 (484)
Q Consensus 408 g~~l~~~~~~~~~~~~~l~~~i~~vl---~~~~~~~~~~~a~~l~~~~~~a~~~~~g~~~~~~~~~~~~~~~~~~~~ 481 (484)
|..++ .-+.++++++|.+++ .|++ .++ ++++.++ .+..+-...++++++-++++..+.
T Consensus 420 G~l~~------~~d~~~la~~i~~ll~~~~~~~---~~~---~~~~~~~----~~~fs~~~~~~~~~~ly~~~~~~~ 480 (485)
T 2qzs_A 420 GFVFE------DSNAWSLLRAIRRAFVLWSRPS---LWR---FVQRQAM----AMDFSWQVAAKSYRELYYRLKLEH 480 (485)
T ss_dssp BEEEC------SSSHHHHHHHHHHHHHHHTSHH---HHH---HHHHHHH----HCCCCHHHHHHHHHHHHHHHC---
T ss_pred eEEEC------CCCHHHHHHHHHHHHHHcCCHH---HHH---HHHHHHH----hhcCCHHHHHHHHHHHHHHhhhhh
Confidence 77764 348899999999999 5654 332 2333322 344666777777777777765443
No 46
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.10 E-value=0.0016 Score=64.09 Aligned_cols=76 Identities=11% Similarity=-0.054 Sum_probs=55.7
Q ss_pred ceEecCCcchh---hhccCCCcccccc-ccC-chhHHHHH-------hcCCceeecccccccchhHHHHHhhhcceEE-e
Q 043859 345 GVVVPQWAPQI---DILSHPSVGGFLS-HCG-WNSTLESI-------TNGVPMIVWPLYSEQRMNATILTEELGVAIR-S 411 (484)
Q Consensus 345 ~v~v~~~ipq~---~vL~~~~~~~~It-HgG-~gs~~eal-------~~GvP~v~~P~~~DQ~~na~rv~~~~G~g~~-l 411 (484)
+|.+.+++|+. ++|..+++-++-+ +-| -+++.||+ ++|+|+|+... + ++-..|+. +
T Consensus 266 ~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v-~~~~~G~l~v 334 (406)
T 2hy7_A 266 NVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------V-VGPYKSRFGY 334 (406)
T ss_dssp TEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------G-TCSCSSEEEE
T ss_pred CEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------c-ccCcceEEEe
Confidence 88888999864 5788999522212 334 45789999 99999999854 4 35455766 5
Q ss_pred eecCCCCccCHHHHHHHHHHHhcccc
Q 043859 412 KVLPSKGVVGREEIKTMVRRILVDEE 437 (484)
Q Consensus 412 ~~~~~~~~~~~~~l~~~i~~vl~~~~ 437 (484)
. .-+.++++++|.++++|+.
T Consensus 335 ~------~~d~~~la~ai~~ll~~~~ 354 (406)
T 2hy7_A 335 T------PGNADSVIAAITQALEAPR 354 (406)
T ss_dssp C------TTCHHHHHHHHHHHHHCCC
T ss_pred C------CCCHHHHHHHHHHHHhCcc
Confidence 4 3478999999999998764
No 47
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.05 E-value=2.4e-05 Score=67.63 Aligned_cols=89 Identities=12% Similarity=0.077 Sum_probs=64.0
Q ss_pred CceEecCCcch---hhhccCCCcccccc---ccC-chhHHHHHhcCCceeecccccccchhHHHHHhhhcceEEeeecCC
Q 043859 344 IGVVVPQWAPQ---IDILSHPSVGGFLS---HCG-WNSTLESITNGVPMIVWPLYSEQRMNATILTEELGVAIRSKVLPS 416 (484)
Q Consensus 344 ~~v~v~~~ipq---~~vL~~~~~~~~It---HgG-~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~g~~l~~~~~ 416 (484)
+++.+.+|+++ .+++..+++ +|. +.| ..++.||+++|+|+|+... ..+...+ ++.+.|+.+ .
T Consensus 78 ~~v~~~g~~~~~e~~~~~~~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~-~--- 146 (177)
T 2f9f_A 78 DNVKFLGSVSEEELIDLYSRCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETV-INEKTGYLV-N--- 146 (177)
T ss_dssp TTEEEEESCCHHHHHHHHHHCSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHC-CBTTTEEEE-C---
T ss_pred CcEEEeCCCCHHHHHHHHHhCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHh-cCCCccEEe-C---
Confidence 48888899987 568999994 554 334 4499999999999999753 4555555 455677665 2
Q ss_pred CCccCHHHHHHHHHHHhcccchHHHHHHHHHH
Q 043859 417 KGVVGREEIKTMVRRILVDEEGYEIRAKVKEL 448 (484)
Q Consensus 417 ~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l 448 (484)
-+.+++.++|.++++|++ .+++++++.
T Consensus 147 ---~d~~~l~~~i~~l~~~~~--~~~~~~~~~ 173 (177)
T 2f9f_A 147 ---ADVNEIIDAMKKVSKNPD--KFKKDCFRR 173 (177)
T ss_dssp ---SCHHHHHHHHHHHHHCTT--TTHHHHHHH
T ss_pred ---CCHHHHHHHHHHHHhCHH--HHHHHHHHH
Confidence 278999999999998865 134444443
No 48
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.47 E-value=0.0024 Score=53.89 Aligned_cols=90 Identities=10% Similarity=0.101 Sum_probs=58.2
Q ss_pred ceEecCCcchh---hhccCCCcccccc----ccCchhHHHHHhcCC-ceeecccccccchhHHHHHhhhcceEEeeecCC
Q 043859 345 GVVVPQWAPQI---DILSHPSVGGFLS----HCGWNSTLESITNGV-PMIVWPLYSEQRMNATILTEELGVAIRSKVLPS 416 (484)
Q Consensus 345 ~v~v~~~ipq~---~vL~~~~~~~~It----HgG~gs~~eal~~Gv-P~v~~P~~~DQ~~na~rv~~~~G~g~~l~~~~~ 416 (484)
++.+ .|+|+. +++..+++ +|. -|.-.++.||+++|+ |+|+... .......+ ++.+. .+
T Consensus 57 ~v~~-g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~---~~~~~~~~-~~~~~--~~----- 122 (166)
T 3qhp_A 57 KAEF-GFVNSNELLEILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSP---LSATRQFA-LDERS--LF----- 122 (166)
T ss_dssp EEEC-CCCCHHHHHHHHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCT---TCGGGGGC-SSGGG--EE-----
T ss_pred eEEE-eecCHHHHHHHHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCC---CCchhhhc-cCCce--EE-----
Confidence 6778 999864 57889994 553 244569999999996 9999332 22222232 23233 22
Q ss_pred CCccCHHHHHHHHHHHhcccc-hHHHHHHHHHHH
Q 043859 417 KGVVGREEIKTMVRRILVDEE-GYEIRAKVKELQ 449 (484)
Q Consensus 417 ~~~~~~~~l~~~i~~vl~~~~-~~~~~~~a~~l~ 449 (484)
..-+.+++.++|.+++.|++ .+.+.+++++..
T Consensus 123 -~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~ 155 (166)
T 3qhp_A 123 -EPNNAKDLSAKIDWWLENKLERERMQNEYAKSA 155 (166)
T ss_dssp -CTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred -cCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 34589999999999999865 233445554443
No 49
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.29 E-value=0.003 Score=66.97 Aligned_cols=177 Identities=16% Similarity=0.194 Sum_probs=106.1
Q ss_pred CCCeEEEEecCCCCCCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCCCCCCcccCCCCCCCCCccCCCchhHHH-hhcCCc
Q 043859 267 PSESVLYVSFGSGGTLTYEQITELAWGLELSQQRFIWVVRLPNETTGDGSFFTAGSGAGDDDLSSLLPDGFLS-RTLDIG 345 (484)
Q Consensus 267 ~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~~~~ 345 (484)
++..+||.+|-+.....++.+..-.+-|++.+..++|.+..+.. . ...+-..+.. .+..+.
T Consensus 520 p~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~---------------~---~~~l~~~~~~~gi~~~r 581 (723)
T 4gyw_A 520 PEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAV---------------G---EPNIQQYAQNMGLPQNR 581 (723)
T ss_dssp CTTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGG---------------G---HHHHHHHHHHTTCCGGG
T ss_pred CCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHH---------------H---HHHHHHHHHhcCCCcCe
Confidence 34569999999888889999999889888888889999854321 0 0111111111 122346
Q ss_pred eEecCCcchhh---hccCCCcccccc---ccCchhHHHHHhcCCceeeccccc-ccchhHHHHHhhhcceEEeeecCCCC
Q 043859 346 VVVPQWAPQID---ILSHPSVGGFLS---HCGWNSTLESITNGVPMIVWPLYS-EQRMNATILTEELGVAIRSKVLPSKG 418 (484)
Q Consensus 346 v~v~~~ipq~~---vL~~~~~~~~It---HgG~gs~~eal~~GvP~v~~P~~~-DQ~~na~rv~~~~G~g~~l~~~~~~~ 418 (484)
+++.+..|..+ .+..+| +++. .+|.+|++|||+.|||+|.+|-.. =...-+..+ ..+|+.-.+
T Consensus 582 ~~f~~~~~~~~~l~~~~~~D--i~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l-~~~gl~e~i------- 651 (723)
T 4gyw_A 582 IIFSPVAPKEEHVRRGQLAD--VCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQL-TCLGCLELI------- 651 (723)
T ss_dssp EEEEECCCHHHHHHHGGGCS--EEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHH-HHHTCGGGB-------
T ss_pred EEECCCCCHHHHHHHhCCCe--EEeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHH-HHcCCcccc-------
Confidence 77777887654 445677 5654 899999999999999999999322 122223333 455655332
Q ss_pred ccCHHHHHHHHHHHhcccc-hHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHhhh
Q 043859 419 VVGREEIKTMVRRILVDEE-GYEIRAKVKELQRSAQKAWTRESGSSYSSLARLAKECGMM 477 (484)
Q Consensus 419 ~~~~~~l~~~i~~vl~~~~-~~~~~~~a~~l~~~~~~a~~~~~g~~~~~~~~~~~~~~~~ 477 (484)
.-+.++-.+...++-.|.. ..++|+ +|++.... ..-......++.|.+.+++|
T Consensus 652 a~~~~~Y~~~a~~la~d~~~l~~lr~---~l~~~~~~---s~l~d~~~~~~~le~a~~~~ 705 (723)
T 4gyw_A 652 AKNRQEYEDIAVKLGTDLEYLKKVRG---KVWKQRIS---SPLFNTKQYTMELERLYLQM 705 (723)
T ss_dssp CSSHHHHHHHHHHHHHCHHHHHHHHH---HHHHHHHH---SSTTCHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHhcCHHHHHHHHH---HHHHHHHh---CcCcCHHHHHHHHHHHHHHH
Confidence 2356665555556666644 122222 22222221 33344555666666666665
No 50
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.21 E-value=0.017 Score=55.49 Aligned_cols=107 Identities=13% Similarity=0.016 Sum_probs=71.8
Q ss_pred CCCCeEEEEcCCCccChHHHHHHHHHHHhcC-CCeEEEEecCCCchhHHHHHhhhccCCCce-EEEecCCCCCCCCCCCC
Q 043859 5 SSKPHAVLLASPGVGHVIPVLELGKRLVTLY-NFQVTIFVVASQTSAAESKILQSAMSSKLC-HVIEIPAPDISGLVDPD 82 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P~l~La~~L~~r~-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~ 82 (484)
...+||+++-..+.|++.-+..+.+.|+++. +.+|++++.+.+.+ +++..| .+ +++.++.. .
T Consensus 6 l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~-----l~~~~p---~vd~vi~~~~~--------~ 69 (349)
T 3tov_A 6 LDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQ-----VMEYNP---NIDELIVVDKK--------G 69 (349)
T ss_dssp CTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGG-----GTSSCT---TCSEEEEECCS--------S
T ss_pred CCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhH-----HHhcCC---CccEEEEeCcc--------c
Confidence 4568999999999999999999999999875 79999999997653 345444 33 34554421 1
Q ss_pred chHHHHHHHHHHHhhHHHHHHHHhcCCCC-eEEEeCCchhhHHHHHHHhCCCeEE
Q 043859 83 AAVVTIISVIMREIKPAFRSAISALKTTP-TALIVDLFGTESLAIAEELQIPKYV 136 (484)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~p-D~VI~D~~~~~~~~~A~~lgIP~v~ 136 (484)
....+.. ...+...+++. ++ |++|.=....-...++...|+|..+
T Consensus 70 --~~~~~~~-----~~~l~~~Lr~~--~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 70 --RHNSISG-----LNEVAREINAK--GKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp --HHHHHHH-----HHHHHHHHHHH--CCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred --ccccHHH-----HHHHHHHHhhC--CCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 0111111 11233445555 89 9999654445556788889999654
No 51
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.00 E-value=0.015 Score=50.60 Aligned_cols=79 Identities=14% Similarity=0.040 Sum_probs=57.1
Q ss_pred ceEe-cCCcch---hhhccCCCccccccc----cCchhHHHHHhcCCceeecccccccchhHHHHHhhhcceEEeeecCC
Q 043859 345 GVVV-PQWAPQ---IDILSHPSVGGFLSH----CGWNSTLESITNGVPMIVWPLYSEQRMNATILTEELGVAIRSKVLPS 416 (484)
Q Consensus 345 ~v~v-~~~ipq---~~vL~~~~~~~~ItH----gG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~g~~l~~~~~ 416 (484)
++.+ .+|+++ .+++..+++ +|.- |.-.++.||+++|+|+|+.... .....+ +.+.|..++
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~~--~~~~g~~~~---- 163 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII--TNETGILVK---- 163 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHC--CTTTCEEEC----
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCCC----ChHHHc--CCCceEEec----
Confidence 7888 899984 368899994 5532 2346899999999999987542 333332 345676653
Q ss_pred CCccCHHHHHHHHHHHhc-ccc
Q 043859 417 KGVVGREEIKTMVRRILV-DEE 437 (484)
Q Consensus 417 ~~~~~~~~l~~~i~~vl~-~~~ 437 (484)
.-+.+++.++|.++++ |+.
T Consensus 164 --~~~~~~l~~~i~~l~~~~~~ 183 (200)
T 2bfw_A 164 --AGDPGELANAILKALELSRS 183 (200)
T ss_dssp --TTCHHHHHHHHHHHHHCCHH
T ss_pred --CCCHHHHHHHHHHHHhcCHH
Confidence 3488999999999998 865
No 52
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=96.87 E-value=0.056 Score=51.54 Aligned_cols=103 Identities=15% Similarity=0.048 Sum_probs=65.2
Q ss_pred CeEEEEcCCCccChHHHHHHHHHHHhcC-CCeEEEEecCCCchhHHHHHhhhccCCCce-EEEecCCCCCCCCCCCCchH
Q 043859 8 PHAVLLASPGVGHVIPVLELGKRLVTLY-NFQVTIFVVASQTSAAESKILQSAMSSKLC-HVIEIPAPDISGLVDPDAAV 85 (484)
Q Consensus 8 ~~il~~~~p~~GHv~P~l~La~~L~~r~-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~ 85 (484)
|||+++...+.|++.=+..+.+.|+++. +.+|++++.+.+. ..++..+ .+ +++.++... . ..
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~-----~l~~~~p---~i~~v~~~~~~~---~-~~---- 64 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCR-----PLLSRMP---EVNEAIPMPLGH---G-AL---- 64 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGH-----HHHTTCT---TEEEEEEC---------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchh-----HHHhcCC---ccCEEEEecCCc---c-cc----
Confidence 7999999999999999999999998865 7999999998544 3445444 23 445443210 0 00
Q ss_pred HHHHHHHHHHhhHHHHHHHHhc-CCCCeEEEeCCchhhHHHHHHHhCCCeEE
Q 043859 86 VTIISVIMREIKPAFRSAISAL-KTTPTALIVDLFGTESLAIAEELQIPKYV 136 (484)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~l~~~-~~~pD~VI~D~~~~~~~~~A~~lgIP~v~ 136 (484)
....+.++.+.+ ..++|+||.=....-...++...|+|..+
T Consensus 65 ----------~~~~~~~l~~~l~~~~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 65 ----------EIGERRKLGHSLREKRYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp ----------CHHHHHHHHHHTTTTTCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred ----------chHHHHHHHHHHHhcCCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 011223344444 23899999322233455678888999743
No 53
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=96.72 E-value=0.0032 Score=60.17 Aligned_cols=95 Identities=20% Similarity=0.203 Sum_probs=70.1
Q ss_pred ceEecCCcchhhh---ccCCCccccccccCc---------hhHHHHHhcCCceeecccccccchhHHHHHhhhcceEEee
Q 043859 345 GVVVPQWAPQIDI---LSHPSVGGFLSHCGW---------NSTLESITNGVPMIVWPLYSEQRMNATILTEELGVAIRSK 412 (484)
Q Consensus 345 ~v~v~~~ipq~~v---L~~~~~~~~ItHgG~---------gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~g~~l~ 412 (484)
|+...+|+|..++ |..++.+++.+-+.. +-+.|+|++|+|+|+.+ ...++..+ ++.|+|+.++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v-~~~~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELI-ENNGLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHH-HHHTCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHH-HhCCeEEEeC
Confidence 8999999998664 556676566533433 34789999999999854 45677777 7899999874
Q ss_pred ecCCCCccCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHH
Q 043859 413 VLPSKGVVGREEIKTMVRRILVDEEGYEIRAKVKELQRSAQ 453 (484)
Q Consensus 413 ~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~ 453 (484)
+.+++.+++.++..+ +.+.+++|+++.++.++
T Consensus 290 --------~~~e~~~~i~~l~~~-~~~~m~~na~~~a~~~~ 321 (339)
T 3rhz_A 290 --------DVEEAIMKVKNVNED-EYIELVKNVRSFNPILR 321 (339)
T ss_dssp --------SHHHHHHHHHHCCHH-HHHHHHHHHHHHTHHHH
T ss_pred --------CHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhh
Confidence 467888888886543 34668899988877744
No 54
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=96.63 E-value=0.012 Score=60.18 Aligned_cols=143 Identities=10% Similarity=0.017 Sum_probs=87.6
Q ss_pred eEEEEecCCCCCCCHHHHHHHHHHHhhCCCcEEEEE-eCCCCCCCCCCcccCCCCCCCCCccCCCchhHH-HhhcCCceE
Q 043859 270 SVLYVSFGSGGTLTYEQITELAWGLELSQQRFIWVV-RLPNETTGDGSFFTAGSGAGDDDLSSLLPDGFL-SRTLDIGVV 347 (484)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~~~~v~ 347 (484)
.++|.+|++.....++.+....+-+++.+..++|.. .+... + ....+-..+. ..+. +.++
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~---------------g--~~~~~~~~~~~~GI~-~Rv~ 502 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSN---------------G--ITHPYVERFIKSYLG-DSAT 502 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCC---------------G--GGHHHHHHHHHHHHG-GGEE
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCc---------------h--hhHHHHHHHHHcCCC-ccEE
Confidence 589999999888888888888888888777777753 11110 0 0000001111 1222 3677
Q ss_pred ecCCcchhh---hccCCCcccc-ccccCchhHHHHHhcCCceeeccccccc-chhHHHHHhhhcceEEeeecCCCCccCH
Q 043859 348 VPQWAPQID---ILSHPSVGGF-LSHCGWNSTLESITNGVPMIVWPLYSEQ-RMNATILTEELGVAIRSKVLPSKGVVGR 422 (484)
Q Consensus 348 v~~~ipq~~---vL~~~~~~~~-ItHgG~gs~~eal~~GvP~v~~P~~~DQ-~~na~rv~~~~G~g~~l~~~~~~~~~~~ 422 (484)
+.+.+|..+ .+..+|+-|- ...+|..|++|||+.|||+|+++-..=. ..-+..+ ...|+.-.+- .-+.
T Consensus 503 F~g~~p~~e~la~y~~aDIfLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL-~~~GLpE~LI------A~d~ 575 (631)
T 3q3e_A 503 AHPHSPYHQYLRILHNCDMMVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLF-KRLGLPEWLI------ANTV 575 (631)
T ss_dssp EECCCCHHHHHHHHHTCSEEECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHH-HHTTCCGGGE------ESSH
T ss_pred EcCCCCHHHHHHHHhcCcEEEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHH-HhcCCCccee------cCCH
Confidence 778888765 4478884221 2347889999999999999999743211 1111222 2445543110 2368
Q ss_pred HHHHHHHHHHhcccc
Q 043859 423 EEIKTMVRRILVDEE 437 (484)
Q Consensus 423 ~~l~~~i~~vl~~~~ 437 (484)
++..+...++.+|+.
T Consensus 576 eeYv~~Av~La~D~~ 590 (631)
T 3q3e_A 576 DEYVERAVRLAENHQ 590 (631)
T ss_dssp HHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHhCCHH
Confidence 888888888998865
No 55
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=95.74 E-value=0.044 Score=51.90 Aligned_cols=42 Identities=10% Similarity=0.120 Sum_probs=38.1
Q ss_pred CeEEEEcCCCccChHHHHHHHHHHHhcC-CCeEEEEecCCCch
Q 043859 8 PHAVLLASPGVGHVIPVLELGKRLVTLY-NFQVTIFVVASQTS 49 (484)
Q Consensus 8 ~~il~~~~p~~GHv~P~l~La~~L~~r~-Gh~Vt~~~~~~~~~ 49 (484)
|||+++-..+.|++.=+..+.+.|+++. +.+|++++.+.+.+
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~ 43 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQ 43 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTH
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhH
Confidence 6999999999999999999999999876 79999999987653
No 56
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=92.67 E-value=0.1 Score=51.25 Aligned_cols=79 Identities=15% Similarity=0.039 Sum_probs=56.0
Q ss_pred ceEecCCcchh---hhccCCCcccccc--c-cCc-hhHHHHHhcCCceeecccccccchhHHHHHhhhcceEEeeecCCC
Q 043859 345 GVVVPQWAPQI---DILSHPSVGGFLS--H-CGW-NSTLESITNGVPMIVWPLYSEQRMNATILTEELGVAIRSKVLPSK 417 (484)
Q Consensus 345 ~v~v~~~ipq~---~vL~~~~~~~~It--H-gG~-gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~g~~l~~~~~~ 417 (484)
++.+.+++|+. ++|..++ +||. . =|. .+++||+++|+|+|+ -..+ ....+ ++-..|+.++
T Consensus 296 ~v~f~G~~~~~~l~~~~~~ad--v~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v-~~~~~G~lv~----- 362 (413)
T 2x0d_A 296 HLNSLGKLTLEDYADLLKRSS--IGISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLS-NWHSNIVSLE----- 362 (413)
T ss_dssp EEEEEESCCHHHHHHHHHHCC--EEECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGG-GTBTTEEEES-----
T ss_pred cEEEcCCCCHHHHHHHHHhCC--EEEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhh-hcCCCEEEeC-----
Confidence 78888999764 5788999 4553 2 133 468999999999998 3222 22333 4444677664
Q ss_pred CccCHHHHHHHHHHHhcccc
Q 043859 418 GVVGREEIKTMVRRILVDEE 437 (484)
Q Consensus 418 ~~~~~~~l~~~i~~vl~~~~ 437 (484)
.-++++++++|.++++|++
T Consensus 363 -~~d~~~la~ai~~ll~~~~ 381 (413)
T 2x0d_A 363 -QLNPENIAETLVELCMSFN 381 (413)
T ss_dssp -SCSHHHHHHHHHHHHHHTC
T ss_pred -CCCHHHHHHHHHHHHcCHH
Confidence 3588999999999999876
No 57
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=90.63 E-value=0.92 Score=40.62 Aligned_cols=38 Identities=18% Similarity=0.260 Sum_probs=31.1
Q ss_pred CeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCc
Q 043859 8 PHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQT 48 (484)
Q Consensus 8 ~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~ 48 (484)
||||+..=-+. |---+.+|+++|.+. | +|+++.+...+
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~-g-~V~VVAP~~~~ 39 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSL-G-RVVVVAPDRNL 39 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTT-S-EEEEEEESSCC
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhc-C-CEEEEecCCCc
Confidence 78888877665 556788999999987 7 99999998755
No 58
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=90.45 E-value=0.58 Score=42.10 Aligned_cols=41 Identities=20% Similarity=0.144 Sum_probs=32.0
Q ss_pred CCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCc
Q 043859 5 SSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQT 48 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~ 48 (484)
+++||||+..=-+. |---..+|+++|.+ +|+|+++.+...+
T Consensus 9 ~~~m~ILlTNDDGi-~apGi~aL~~~l~~--~~~V~VVAP~~~~ 49 (261)
T 3ty2_A 9 TPKLRLLLSNDDGV-YAKGLAILAKTLAD--LGEVDVVAPDRNR 49 (261)
T ss_dssp --CCEEEEECSSCT-TCHHHHHHHHHHTT--TSEEEEEEESSCC
T ss_pred CCCCeEEEEcCCCC-CCHHHHHHHHHHHh--cCCEEEEecCCCC
Confidence 56799999887666 56678889999975 6999999998755
No 59
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=90.33 E-value=3.8 Score=35.18 Aligned_cols=102 Identities=9% Similarity=0.049 Sum_probs=65.0
Q ss_pred CCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCC-chhHHHHHhhhccCCCceEEEecCCCCCCCCCCCCchH
Q 043859 7 KPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQ-TSAAESKILQSAMSSKLCHVIEIPAPDISGLVDPDAAV 85 (484)
Q Consensus 7 ~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 85 (484)
+-.|++++.++.|-..-.+.+|-+...+ |++|.|+..-.. ...=+...++..+ +.+........ ......
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~-G~rV~~vQF~Kg~~~~gE~~~l~~L~----v~~~~~g~gf~----~~~~~~ 98 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGH-GKNVGVVQFIKGTWPNGERNLLEPHG----VEFQVMATGFT----WETQNR 98 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHT-TCCEEEEESSCCSSCCHHHHHHGGGT----CEEEECCTTCC----CCGGGH
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHC-CCeEEEEEeeCCCCCccHHHHHHhCC----cEEEEcccccc----cCCCCc
Confidence 4478899999999999999999999999 999999976543 2222334556665 77777765211 111111
Q ss_pred HHHHHHHHHHhhHHHHHHHHhc-CCCCeEEEeCCchh
Q 043859 86 VTIISVIMREIKPAFRSAISAL-KTTPTALIVDLFGT 121 (484)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~l~~~-~~~pD~VI~D~~~~ 121 (484)
.. -.......+..+.+.+ +.++|+||.|.+.+
T Consensus 99 ~~----~~~~a~~~l~~a~~~l~~~~yDlvILDEi~~ 131 (196)
T 1g5t_A 99 EA----DTAACMAVWQHGKRMLADPLLDMVVLDELTY 131 (196)
T ss_dssp HH----HHHHHHHHHHHHHHHTTCTTCSEEEEETHHH
T ss_pred HH----HHHHHHHHHHHHHHHHhcCCCCEEEEeCCCc
Confidence 11 1112233444444444 44899999997655
No 60
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=90.20 E-value=2.8 Score=42.39 Aligned_cols=119 Identities=8% Similarity=-0.097 Sum_probs=66.0
Q ss_pred CceEecCCcchh---hhccCCCccccccc---cCc-hhHHHHHhcCCceeecccccccchhHHHHHhhhcceEEeeecCC
Q 043859 344 IGVVVPQWAPQI---DILSHPSVGGFLSH---CGW-NSTLESITNGVPMIVWPLYSEQRMNATILTEELGVAIRSKVLPS 416 (484)
Q Consensus 344 ~~v~v~~~ipq~---~vL~~~~~~~~ItH---gG~-gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~g~~l~~~~~ 416 (484)
.++.+..+.+.. .+++.++ +||.- =|. .+++||+++|+|+|+-.. ......| ++-.-|........
T Consensus 382 ~~v~~~~~~~~~~~~~~~~~aD--~~v~PS~~E~fgl~~lEAma~G~PvI~s~~----gG~~e~V-~dg~~G~~~~~~~~ 454 (536)
T 3vue_A 382 GKVRAVVKFNAPLAHLIMAGAD--VLAVPSRFEPCGLIQLQGMRYGTPCACAST----GGLVDTV-IEGKTGFHMGRLSV 454 (536)
T ss_dssp TTEEEECSCCHHHHHHHHHHCS--EEEECCSCCSSCSHHHHHHHTTCCEEECSC----THHHHHC-CBTTTEEECCCCCS
T ss_pred CceEEEEeccHHHHHHHHHhhh--eeecccccCCCCHHHHHHHHcCCCEEEcCC----CCchhee-eCCCCccccccCCC
Confidence 466665666543 4788888 45542 233 488999999999998654 3344444 33333433221000
Q ss_pred C----CccCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHhhh
Q 043859 417 K----GVVGREEIKTMVRRILVDEEGYEIRAKVKELQRSAQKAWTRESGSSYSSLARLAKECGMM 477 (484)
Q Consensus 417 ~----~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~~~g~~~~~~~~~~~~~~~~ 477 (484)
+ ...+.++|.++|+++|...+-+.+ ++..+.++ .+.-|=.+..++.++-.+++
T Consensus 455 ~g~l~~~~d~~~la~ai~ral~~~~~~~~-------~~~~~~am-~~~fSW~~~A~~y~~ly~~L 511 (536)
T 3vue_A 455 DCKVVEPSDVKKVAATLKRAIKVVGTPAY-------EEMVRNCM-NQDLSWKGPAKNWENVLLGL 511 (536)
T ss_dssp CTTCCCHHHHHHHHHHHHHHHHHTTSHHH-------HHHHHHHH-HSCCSSHHHHHHHHHHHHTT
T ss_pred ceeEECCCCHHHHHHHHHHHHHhcCcHHH-------HHHHHHHH-HhcCCHHHHHHHHHHHHHHh
Confidence 0 234678899999998863110112 22333344 44455555566666555555
No 61
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=89.23 E-value=1.1 Score=39.92 Aligned_cols=38 Identities=8% Similarity=0.114 Sum_probs=29.7
Q ss_pred CeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCc
Q 043859 8 PHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQT 48 (484)
Q Consensus 8 ~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~ 48 (484)
||||+..=-+. |---+..|+++|++. | +|+++.+...+
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~-g-~V~VVAP~~~~ 38 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQF-G-EVFVAAPDTEQ 38 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTT-S-EEEEEEECSSC
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhC-C-CEEEEecCCCC
Confidence 67777766555 455588999999988 7 89999998754
No 62
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=89.01 E-value=0.26 Score=50.10 Aligned_cols=43 Identities=16% Similarity=0.240 Sum_probs=29.9
Q ss_pred CCCC--CCCCeEEEEcC--------CCccChHHHHHHHHHHHhcCCCeEEEEecCC
Q 043859 1 MESS--SSKPHAVLLAS--------PGVGHVIPVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 1 m~~~--~~~~~il~~~~--------p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
|+.. .++|||+|++. ++.|.+ .-+|+++|+++ ||+|+++++.+
T Consensus 1 ~~~~~~~~~MkIl~vs~E~~P~~K~GGLadv--v~~L~~aL~~~-G~~V~Vi~P~Y 53 (536)
T 3vue_A 1 MAHHHHHHHMNVVFVGAEMAPWSKTGGLGDV--LGGLPPAMAAN-GHRVMVISPRY 53 (536)
T ss_dssp -------CCCEEEEECSCBTTTBCSSHHHHH--HHHHHHHHHTT-TCEEEEEEECC
T ss_pred CCcccCCCCcEEEEEEEeccchhccCcHHHH--HHHHHHHHHHc-CCeEEEEecCc
Confidence 4444 45899999974 333444 55789999999 99999999654
No 63
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=88.64 E-value=1.6 Score=39.19 Aligned_cols=109 Identities=16% Similarity=0.184 Sum_probs=58.4
Q ss_pred eEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCC---CCCCCCCCchH
Q 043859 9 HAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPD---ISGLVDPDAAV 85 (484)
Q Consensus 9 ~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~---~~~~~~~~~~~ 85 (484)
|||+..=-+. |---+..|+++|.+. | +|+++.+...+.-... .......+++....... +++. .
T Consensus 3 ~ILlTNDDGi-~apGi~~L~~~l~~~-g-~V~VvAP~~~~Sg~g~----siT~~~pl~~~~~~~~~~~~v~GT------P 69 (251)
T 2wqk_A 3 TFLLVNDDGY-FSPGINALREALKSL-G-RVVVVAPDRNLSGVGH----SLTFTEPLKMRKIDTDFYTVIDGT------P 69 (251)
T ss_dssp EEEEECSSCT-TCHHHHHHHHHHTTT-S-EEEEEEESSCCTTSCC----SCCCSSCEEEEEEETTEEEETTCC------H
T ss_pred EEEEEcCCCC-CcHHHHHHHHHHHhC-C-CEEEEeeCCCCccccc----CcCCCCCceeEEeeccceeecCCC------h
Confidence 6666655444 445578899999988 7 5998888765421111 11111225554443211 1111 1
Q ss_pred HHHHHHHHHHhhHHHHHHHHhcCCCCeEEEe----------CCchh---hHHHHHHHhCCCeEEEec
Q 043859 86 VTIISVIMREIKPAFRSAISALKTTPTALIV----------DLFGT---ESLAIAEELQIPKYVYVG 139 (484)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~----------D~~~~---~~~~~A~~lgIP~v~~~~ 139 (484)
.+.... .+..++.+. +||+||+ |.++. +++.-|..+|||.|.++.
T Consensus 70 ----aDCV~l---al~~~l~~~--~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~ 127 (251)
T 2wqk_A 70 ----ADCVHL---GYRVILEEK--KPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp ----HHHHHH---HHHTTTTTC--CCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred ----HHHHhh---hhhhhcCCC--CCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEc
Confidence 111111 233344444 8999997 33333 334455568999999873
No 64
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=88.33 E-value=1.5 Score=40.02 Aligned_cols=38 Identities=18% Similarity=0.173 Sum_probs=29.8
Q ss_pred CeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCc
Q 043859 8 PHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQT 48 (484)
Q Consensus 8 ~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~ 48 (484)
||||+..=-+. |---+..|+++|++. | +|+++.+...+
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~-g-~V~VVAP~~~q 38 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSL-G-DVDVVAPESPK 38 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGG-S-EEEEEEESSCT
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhC-C-CEEEEecCCCC
Confidence 67777766555 455588999999998 7 99999998754
No 65
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=88.04 E-value=1.7 Score=38.85 Aligned_cols=38 Identities=11% Similarity=0.176 Sum_probs=29.6
Q ss_pred CeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCc
Q 043859 8 PHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQT 48 (484)
Q Consensus 8 ~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~ 48 (484)
||||+..=-+. |---+..|+++|++. | +|+++.+...+
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~-g-~V~VVAP~~~~ 38 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEE-H-EVFVVAPDKER 38 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTT-S-EEEEEEESSCC
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhC-C-CEEEEecCCCC
Confidence 67777766555 455588999999987 7 89999998755
No 66
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=87.99 E-value=0.85 Score=36.84 Aligned_cols=54 Identities=17% Similarity=0.068 Sum_probs=43.7
Q ss_pred CCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhhc
Q 043859 5 SSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSA 59 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~ 59 (484)
|.+.+|++.+.++.+|-....-++..|+.. |++|++.......+.+.+...+..
T Consensus 1 ~~~~~vvla~~~~d~HdiG~~~v~~~l~~~-G~~Vi~lG~~~p~e~~v~~a~~~~ 54 (137)
T 1ccw_A 1 MEKKTIVLGVIGSDCHAVGNKILDHAFTNA-GFNVVNIGVLSPQELFIKAAIETK 54 (137)
T ss_dssp CCCCEEEEEEETTCCCCHHHHHHHHHHHHT-TCEEEEEEEEECHHHHHHHHHHHT
T ss_pred CCCCEEEEEeCCCchhHHHHHHHHHHHHHC-CCEEEECCCCCCHHHHHHHHHhcC
Confidence 346799999999999999999999999999 999999987655555555544443
No 67
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=86.98 E-value=3.2 Score=37.32 Aligned_cols=126 Identities=13% Similarity=0.117 Sum_probs=71.7
Q ss_pred CCCCeEEEEcC--CCccChHHHHHHHHHHHhcCCCeEEEEec------CCCchhHHHHHhhh-ccCCCceEEEecCCCCC
Q 043859 5 SSKPHAVLLAS--PGVGHVIPVLELGKRLVTLYNFQVTIFVV------ASQTSAAESKILQS-AMSSKLCHVIEIPAPDI 75 (484)
Q Consensus 5 ~~~~~il~~~~--p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~------~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~ 75 (484)
.++|+.+|++. ...|=..-.+.|++.|+++ |.+|.++=+ +...+ ...+.. .+.....+...+..
T Consensus 23 ~~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~-G~~V~~fKPv~~g~~~~~~D---~~~~~~~~g~~~~~~~~~~~~--- 95 (251)
T 3fgn_A 23 QSHMTILVVTGTGTGVGKTVVCAALASAARQA-GIDVAVCKPVQTGTARGDDD---LAEVGRLAGVTQLAGLARYPQ--- 95 (251)
T ss_dssp CSSCEEEEEEESSTTSCHHHHHHHHHHHHHHT-TCCEEEEEEEECCGGGTCCH---HHHHHHHHCCCEEEEEEECSS---
T ss_pred ccCCCEEEEEeCCCCCcHHHHHHHHHHHHHHC-CCeEEEEeeeecCCCCCCHH---HHHHHHHcCCCCCCCCeeECC---
Confidence 34677666665 4788999999999999999 999999852 11111 122221 22111122222221
Q ss_pred CCCCCCCchHHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCc--------h--hhHHHHHHHhCCCeEEEeccc
Q 043859 76 SGLVDPDAAVVTIISVIMREIKPAFRSAISALKTTPTALIVDLF--------G--TESLAIAEELQIPKYVYVGTN 141 (484)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~--------~--~~~~~~A~~lgIP~v~~~~~~ 141 (484)
+........+........+.+.+.++++..+.|+||.|.. . .....+|+.++.|++.+....
T Consensus 96 ----p~sP~~aa~~~~~~~~~~~~i~~~~~~l~~~~D~vlIEGagGl~~pl~~~~~~~adla~~l~~pVILV~~~~ 167 (251)
T 3fgn_A 96 ----PMAPAAAAEHAGMALPARDQIVRLIADLDRPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVVVTAD 167 (251)
T ss_dssp ----SSCHHHHHHHTTCCCCCHHHHHHHHHTTCCTTCEEEEECSSSTTCEEETTTEEHHHHHHHTTCEEEEEECSS
T ss_pred ----CCChHHHHHHcCCCCCCHHHHHHHHHHHHhcCCEEEEECCCCCcCCcCcccchHHHHHHHcCCCEEEEEcCC
Confidence 1111111111000011235677777777778999998852 1 234579999999998877543
No 68
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=86.81 E-value=1.4 Score=39.63 Aligned_cols=39 Identities=21% Similarity=0.262 Sum_probs=31.0
Q ss_pred CCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCc
Q 043859 7 KPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQT 48 (484)
Q Consensus 7 ~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~ 48 (484)
+||||+..=-+. |---+..|+++|++. | +|+++.+...+
T Consensus 1 ~M~ILlTNDDGi-~apGi~aL~~~L~~~-g-~V~VVAP~~~~ 39 (254)
T 2v4n_A 1 SMRILLSNDDGV-HAPGIQTLAKALREF-A-DVQVVAPDRNR 39 (254)
T ss_dssp CCEEEEECSSCT-TCHHHHHHHHHHTTT-S-EEEEEEESSCC
T ss_pred CCeEEEEcCCCC-CCHHHHHHHHHHHhC-C-cEEEEeeCCCC
Confidence 478888877665 556688999999886 5 99999998755
No 69
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=86.31 E-value=4.1 Score=35.86 Aligned_cols=160 Identities=10% Similarity=-0.073 Sum_probs=84.8
Q ss_pred cccccCCCCCCeEEEEecCCCCCCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCCCCCCcccCCCCCCCCCccCCCchhHH
Q 043859 259 LFDWLDKQPSESVLYVSFGSGGTLTYEQITELAWGLELSQQRFIWVVRLPNETTGDGSFFTAGSGAGDDDLSSLLPDGFL 338 (484)
Q Consensus 259 ~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~ 338 (484)
++-|++-. .+.++.|..| +.....+..|...|..+.++-. . ..+.+.
T Consensus 23 ~Pifl~L~-gk~VLVVGgG-------~va~~ka~~Ll~~GA~VtVvap-~------------------------~~~~l~ 69 (223)
T 3dfz_A 23 YTVMLDLK-GRSVLVVGGG-------TIATRRIKGFLQEGAAITVVAP-T------------------------VSAEIN 69 (223)
T ss_dssp CEEEECCT-TCCEEEECCS-------HHHHHHHHHHGGGCCCEEEECS-S------------------------CCHHHH
T ss_pred cccEEEcC-CCEEEEECCC-------HHHHHHHHHHHHCCCEEEEECC-C------------------------CCHHHH
Confidence 33355443 4568888777 4455566777777888766531 1 112333
Q ss_pred HhhcCCceEecCCcchhhhccCCCccccccccCchhHHHHHhcCCceeeccc-ccccchhHHHH----HhhhcceEEeee
Q 043859 339 SRTLDIGVVVPQWAPQIDILSHPSVGGFLSHCGWNSTLESITNGVPMIVWPL-YSEQRMNATIL----TEELGVAIRSKV 413 (484)
Q Consensus 339 ~~~~~~~v~v~~~ipq~~vL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~P~-~~DQ~~na~rv----~~~~G~g~~l~~ 413 (484)
+.....++.+...--+.+.|..++ ++|.--|.-.+++.++.-.- ..+|+ ..|.+..+..+ .++-++-+.+.+
T Consensus 70 ~l~~~~~i~~i~~~~~~~dL~~ad--LVIaAT~d~~~N~~I~~~ak-~gi~VNvvD~p~~~~f~~Paiv~rg~l~iaIST 146 (223)
T 3dfz_A 70 EWEAKGQLRVKRKKVGEEDLLNVF--FIVVATNDQAVNKFVKQHIK-NDQLVNMASSFSDGNIQIPAQFSRGRLSLAIST 146 (223)
T ss_dssp HHHHTTSCEEECSCCCGGGSSSCS--EEEECCCCTHHHHHHHHHSC-TTCEEEC-----CCSEECCEEEEETTEEEEEEC
T ss_pred HHHHcCCcEEEECCCCHhHhCCCC--EEEECCCCHHHHHHHHHHHh-CCCEEEEeCCcccCeEEEeeEEEeCCEEEEEEC
Confidence 333333343322222334567777 78888888777777665333 34443 24665554322 123334444432
Q ss_pred cCCCCccCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhh
Q 043859 414 LPSKGVVGREEIKTMVRRILVDEEGYEIRAKVKELQRSAQKAW 456 (484)
Q Consensus 414 ~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~ 456 (484)
... .-.-+..|++.|.+.|-. ....+.+.+.++++.+++.+
T Consensus 147 ~G~-sP~la~~iR~~ie~~lp~-~~~~~~~~~~~~R~~vk~~~ 187 (223)
T 3dfz_A 147 DGA-SPLLTKRIKEDLSSNYDE-SYTQYTQFLYECRVLIHRLN 187 (223)
T ss_dssp TTS-CHHHHHHHHHHHHHHSCT-HHHHHHHHHHHHHHHHHHCC
T ss_pred CCC-CcHHHHHHHHHHHHHccH-HHHHHHHHHHHHHHHHHHHC
Confidence 100 112346788888888854 23348888888888887544
No 70
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=85.06 E-value=5.2 Score=37.54 Aligned_cols=108 Identities=8% Similarity=-0.009 Sum_probs=59.2
Q ss_pred CCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCc---hhHHHHHhhhccCCCceEEEecCCCCCCCCCCC
Q 043859 5 SSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQT---SAAESKILQSAMSSKLCHVIEIPAPDISGLVDP 81 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 81 (484)
|.+|||+|+. --+-...+.++|.++ ||+|..+.+.+.+ ....+...+..+ +.+....... ..
T Consensus 20 ~~~mrIvf~G-----~~~fa~~~L~~L~~~-~~~i~~Vvt~pd~~~~~~~v~~~A~~~g----Ipv~~~~~~~-----~~ 84 (329)
T 2bw0_A 20 FQSMKIAVIG-----QSLFGQEVYCHLRKE-GHEVVGVFTVPDKDGKADPLGLEAEKDG----VPVFKYSRWR-----AK 84 (329)
T ss_dssp -CCCEEEEEC-----CHHHHHHHHHHHHHT-TCEEEEEEECCCCSSCCCHHHHHHHHHT----CCEEECSCCE-----ET
T ss_pred CCCCEEEEEc-----CcHHHHHHHHHHHHC-CCeEEEEEeCCCcCCCCCHHHHHHHHcC----CCEEecCccc-----cc
Confidence 5579999992 223344567899998 8999877763221 111223444444 4444333210 00
Q ss_pred CchHHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCc-hhhHHHHHHHhCCCeEEEeccc
Q 043859 82 DAAVVTIISVIMREIKPAFRSAISALKTTPTALIVDLF-GTESLAIAEELQIPKYVYVGTN 141 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~-~~~~~~~A~~lgIP~v~~~~~~ 141 (484)
. ...+.+.+.++++ +||++|+=.+ ..-...+-......++.+.++.
T Consensus 85 ~------------~~~~~~~~~l~~~--~~Dliv~a~y~~ilp~~il~~~~~g~iNiHpSL 131 (329)
T 2bw0_A 85 G------------QALPDVVAKYQAL--GAELNVLPFCSQFIPMEIISAPRHGSIIYHPSL 131 (329)
T ss_dssp T------------EECHHHHHHHHTT--CCSEEEESSCSSCCCHHHHTCSTTCEEEEESSC
T ss_pred c------------cccHHHHHHHHhc--CCCEEEEeehhhhCCHHHHhhCcCCEEEEcCCc
Confidence 0 0113455667788 9999997644 2222334444455677777654
No 71
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=83.68 E-value=1.4 Score=36.61 Aligned_cols=54 Identities=11% Similarity=0.054 Sum_probs=44.0
Q ss_pred CCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhhc
Q 043859 5 SSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSA 59 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~ 59 (484)
.++.+|++.+.++.+|-....-++..|... |++|++.......+.+.+...+..
T Consensus 16 ~~~~~vlla~~~gd~HdiG~~~va~~l~~~-G~eVi~lG~~~p~e~lv~aa~~~~ 69 (161)
T 2yxb_A 16 RRRYKVLVAKMGLDGHDRGAKVVARALRDA-GFEVVYTGLRQTPEQVAMAAVQED 69 (161)
T ss_dssp CCSCEEEEEEESSSSCCHHHHHHHHHHHHT-TCEEECCCSBCCHHHHHHHHHHTT
T ss_pred CCCCEEEEEeCCCCccHHHHHHHHHHHHHC-CCEEEECCCCCCHHHHHHHHHhcC
Confidence 357899999999999999999999999999 999999987655555555544443
No 72
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=82.62 E-value=12 Score=34.70 Aligned_cols=104 Identities=11% Similarity=0.127 Sum_probs=56.7
Q ss_pred CCCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchh---------HHHHHhhhccCCCceEEEecCCCC
Q 043859 4 SSSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSA---------AESKILQSAMSSKLCHVIEIPAPD 74 (484)
Q Consensus 4 ~~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~p~~~ 74 (484)
+|++|||+|+..|..+ ...-++|.++ ||+|..+.+.+.+.. -.+...+..+ +.+.. |
T Consensus 4 m~~~mrivf~Gt~~fa-----~~~L~~L~~~-~~~v~~Vvt~pd~p~grg~~~~~~~v~~~A~~~g----Ipv~~-~--- 69 (318)
T 3q0i_A 4 MSQSLRIVFAGTPDFA-----ARHLAALLSS-EHEIIAVYTQPERPAGRGKKLTASPVKTLALEHN----VPVYQ-P--- 69 (318)
T ss_dssp ---CCEEEEECCSHHH-----HHHHHHHHTS-SSEEEEEECCCC---------CCCHHHHHHHHTT----CCEEC-C---
T ss_pred cccCCEEEEEecCHHH-----HHHHHHHHHC-CCcEEEEEcCCCCcccccccCCCCHHHHHHHHcC----CCEEc-c---
Confidence 4679999999877433 4556788888 899998887543321 1122333444 33321 1
Q ss_pred CCCCCCCCchHHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCc-hhhHHHHHHHhCCCeEEEeccc
Q 043859 75 ISGLVDPDAAVVTIISVIMREIKPAFRSAISALKTTPTALIVDLF-GTESLAIAEELQIPKYVYVGTN 141 (484)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~-~~~~~~~A~~lgIP~v~~~~~~ 141 (484)
... . . +.+.+.++++ +||++|+=.+ ..-...+-......++.++++.
T Consensus 70 -~~~-~-~---------------~~~~~~l~~~--~~Dliv~~~y~~ilp~~~l~~~~~g~iNiHpSl 117 (318)
T 3q0i_A 70 -ENF-K-S---------------DESKQQLAAL--NADLMVVVAYGLLLPKVVLDTPKLGCINVHGSI 117 (318)
T ss_dssp -SCS-C-S---------------HHHHHHHHTT--CCSEEEESSCCSCCCHHHHTSSTTCEEEEESSS
T ss_pred -CcC-C-C---------------HHHHHHHHhc--CCCEEEEeCccccCCHHHHhhCcCCEEEeCCcc
Confidence 111 0 0 2355777888 9999997643 2222333333444477777653
No 73
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=82.34 E-value=0.77 Score=44.89 Aligned_cols=41 Identities=17% Similarity=0.180 Sum_probs=33.0
Q ss_pred CCCCeEEEEcCCCc-----cChHHHHHHHHHHHhcCCCeEEEEecCC
Q 043859 5 SSKPHAVLLASPGV-----GHVIPVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 5 ~~~~~il~~~~p~~-----GHv~P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
..+|||++++.... |=......+|++|+++ ||+|++++...
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~-GheV~Vvt~~~ 89 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNK-KFKKRIILTDA 89 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTT-TCEEEEEESSC
T ss_pred CCCceEEEEeCCCCccccccHHHHHHHHHHHHHHc-CCceEEEEecC
Confidence 46799999986421 4445689999999999 99999999874
No 74
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=80.68 E-value=9.1 Score=37.18 Aligned_cols=97 Identities=12% Similarity=0.139 Sum_probs=55.0
Q ss_pred CCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCCCCCCCCCch
Q 043859 5 SSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDISGLVDPDAA 84 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 84 (484)
.+++||+|++..... | .+.++.++. |++|+++.+.+.... .... ..-.++.++.. .+.+
T Consensus 3 ~~~k~l~Il~~~~~~---~--~i~~aa~~l-G~~vv~v~~~~~~~~------~~~~--~~d~~~~~~~~-------~d~~ 61 (425)
T 3vot_A 3 KRNKNLAIICQNKHL---P--FIFEEAERL-GLKVTFFYNSAEDFP------GNLP--AVERCVPLPLF-------EDEE 61 (425)
T ss_dssp CCCCEEEEECCCTTC---C--HHHHHHHHT-TCEEEEEEETTSCCC------CSCT--TEEEEEEECTT-------TCHH
T ss_pred CCCcEEEEECCChhH---H--HHHHHHHHC-CCEEEEEECCCcccc------cCHh--hccEEEecCCC-------CCHH
Confidence 345688888755432 2 356778888 999999977643210 1111 11233333321 1101
Q ss_pred HHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEe--CCchhhHHHHHHHhCCCe
Q 043859 85 VVTIISVIMREIKPAFRSAISALKTTPTALIV--DLFGTESLAIAEELQIPK 134 (484)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~--D~~~~~~~~~A~~lgIP~ 134 (484)
.....+.++.++. ++|.|+. |.....+..+|+.+|+|.
T Consensus 62 ----------~~~~~~~~~~~~~--~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 62 ----------AAMDVVRQTFVEF--PFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp ----------HHHHHHHHHHHHS--CCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred ----------HHHHHHHHhhhhc--CCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 1123455666677 9999984 444455567899999993
No 75
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=79.75 E-value=8.8 Score=32.65 Aligned_cols=40 Identities=13% Similarity=0.292 Sum_probs=32.5
Q ss_pred CeEEEEcC--CCccChHHHHHHHHHHHhcCCCeEEEEecCCCc
Q 043859 8 PHAVLLAS--PGVGHVIPVLELGKRLVTLYNFQVTIFVVASQT 48 (484)
Q Consensus 8 ~~il~~~~--p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~ 48 (484)
|+++.+.. ++.|=..-...||..|.++ |++|.++-..+..
T Consensus 1 M~vi~v~s~kgG~GKTt~a~~la~~la~~-g~~vlliD~D~~~ 42 (206)
T 4dzz_A 1 MKVISFLNPKGGSGKTTAVINIATALSRS-GYNIAVVDTDPQM 42 (206)
T ss_dssp CEEEEECCSSTTSSHHHHHHHHHHHHHHT-TCCEEEEECCTTC
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHHC-CCeEEEEECCCCC
Confidence 45555543 6899999999999999999 9999999877544
No 76
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=78.89 E-value=14 Score=34.37 Aligned_cols=102 Identities=12% Similarity=0.110 Sum_probs=59.3
Q ss_pred CCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchh---------HHHHHhhhccCCCceEEEecCCCCCC
Q 043859 6 SKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSA---------AESKILQSAMSSKLCHVIEIPAPDIS 76 (484)
Q Consensus 6 ~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~p~~~~~ 76 (484)
++|||+|+..|..+ ....++|.+. ||+|..+.+.+.+.. -.....+..+ +.+.. | .
T Consensus 2 ~~mrIvf~Gt~~fa-----~~~L~~L~~~-~~~i~~Vvt~pd~p~grg~~~~~~~v~~~A~~~g----Ipv~~-~----~ 66 (314)
T 1fmt_A 2 ESLRIIFAGTPDFA-----ARHLDALLSS-GHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKG----LPVFQ-P----V 66 (314)
T ss_dssp CCCEEEEEECSHHH-----HHHHHHHHHT-TCEEEEEECCCCBC------CBCCHHHHHHHHTT----CCEEC-C----S
T ss_pred CCCEEEEEecCHHH-----HHHHHHHHHC-CCcEEEEEeCCCCccccccccCcCHHHHHHHHcC----CcEEe-c----C
Confidence 57999999876533 4455777778 899987777643211 1222333444 33321 0 1
Q ss_pred CCCCCCchHHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCc-hhhHHHHHHHhCCCeEEEeccc
Q 043859 77 GLVDPDAAVVTIISVIMREIKPAFRSAISALKTTPTALIVDLF-GTESLAIAEELQIPKYVYVGTN 141 (484)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~-~~~~~~~A~~lgIP~v~~~~~~ 141 (484)
.. . .+.+.+.++++ +||++|+=.+ ..-...+-......++.++++.
T Consensus 67 ~~-~----------------~~~~~~~l~~~--~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpSL 113 (314)
T 1fmt_A 67 SL-R----------------PQENQQLVAEL--QADVMVVVAYGLILPKAVLEMPRLGCINVHGSL 113 (314)
T ss_dssp CS-C----------------SHHHHHHHHHT--TCSEEEEESCCSCCCHHHHHSSTTCEEEEESSS
T ss_pred CC-C----------------CHHHHHHHHhc--CCCEEEEeeccccCCHHHHhhccCCEEEEcCCc
Confidence 11 0 13455677888 9999997543 3333444455566678887654
No 77
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=78.86 E-value=8.8 Score=38.19 Aligned_cols=112 Identities=13% Similarity=-0.002 Sum_probs=72.2
Q ss_pred ceEecCCcch---hhhccCCCcccccc--ccCchh-HHHHHhcC---CceeecccccccchhHHHHHhhhc-ceEEeeec
Q 043859 345 GVVVPQWAPQ---IDILSHPSVGGFLS--HCGWNS-TLESITNG---VPMIVWPLYSEQRMNATILTEELG-VAIRSKVL 414 (484)
Q Consensus 345 ~v~v~~~ipq---~~vL~~~~~~~~It--HgG~gs-~~eal~~G---vP~v~~P~~~DQ~~na~rv~~~~G-~g~~l~~~ 414 (484)
.|+....+|+ .+++..+++ ++++ +=|+|. ..|++++| .|+|+--.. ..+ +++| -|+.++
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv-~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~a----Ga~----~~l~~~allVn-- 421 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL-LIFNSTVDGQNLSTFEAPLVNERDADVILSETC----GAA----EVLGEYCRSVN-- 421 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE-EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTB----TTH----HHHGGGSEEEC--
T ss_pred CEEEeCCCCHHHHHHHHHhccE-EEECcccccCChhHHHHHHhCCCCCCEEEeCCC----CCH----HHhCCCEEEEC--
Confidence 4665567776 457778886 4443 568885 58999986 555544222 222 2343 477775
Q ss_pred CCCCccCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHhhhh
Q 043859 415 PSKGVVGREEIKTMVRRILVDEEGYEIRAKVKELQRSAQKAWTRESGSSYSSLARLAKECGMMT 478 (484)
Q Consensus 415 ~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~~~g~~~~~~~~~~~~~~~~~ 478 (484)
-.+.++++++|.++|+++. ++-+++.+++++.++ .-....-++.+++++....
T Consensus 422 ----P~D~~~lA~AI~~aL~m~~-~er~~r~~~~~~~V~------~~d~~~W~~~fl~~L~~~~ 474 (496)
T 3t5t_A 422 ----PFDLVEQAEAISAALAAGP-RQRAEAAARRRDAAR------PWTLEAWVQAQLDGLAADH 474 (496)
T ss_dssp ----TTBHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHT------TCBHHHHHHHHHHHHHHHH
T ss_pred ----CCCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHH------HCCHHHHHHHHHHHHhhcc
Confidence 3489999999999999764 225556666666532 2346667788888877654
No 78
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=78.52 E-value=4.5 Score=36.51 Aligned_cols=54 Identities=13% Similarity=0.018 Sum_probs=44.2
Q ss_pred CCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhhc
Q 043859 5 SSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSA 59 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~ 59 (484)
.++.+|++.+.++..|-....-++..|..+ |++|++++.....+.+.+...+..
T Consensus 121 ~~~~~vlla~~~gd~HdiG~~iva~~L~~~-G~~Vi~LG~~vp~e~l~~~~~~~~ 174 (258)
T 2i2x_B 121 KTKGTVVCHVAEGDVHDIGKNIVTALLRAN-GYNVVDLGRDVPAEEVLAAVQKEK 174 (258)
T ss_dssp CCSCEEEEEECTTCCCCHHHHHHHHHHHHT-TCEEEEEEEECCSHHHHHHHHHHC
T ss_pred CCCCeEEEEeCCCCccHHHHHHHHHHHHHC-CCEEEECCCCCCHHHHHHHHHHcC
Confidence 346799999999999999999999999999 999999987766565555444433
No 79
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=78.07 E-value=4.1 Score=35.59 Aligned_cols=55 Identities=15% Similarity=0.018 Sum_probs=44.6
Q ss_pred CCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhhcc
Q 043859 5 SSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSAM 60 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~ 60 (484)
.++.+|++.+.++..|-....-++..|..+ |++|++.......+.+.+...+..+
T Consensus 90 ~~~~~vll~~v~gd~HdiG~~iv~~~l~~~-G~~Vi~LG~~vp~e~iv~~~~~~~~ 144 (215)
T 3ezx_A 90 EEAGLAITFVAEGDIHDIGHRLVTTMLGAN-GFQIVDLGVDVLNENVVEEAAKHKG 144 (215)
T ss_dssp --CCEEEEEECTTCCCCHHHHHHHHHHHHT-SCEEEECCSSCCHHHHHHHHHHTTT
T ss_pred CCCCeEEEEeCCCChhHHHHHHHHHHHHHC-CCeEEEcCCCCCHHHHHHHHHHcCC
Confidence 446799999999999999999999999999 9999999987666665555544443
No 80
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=77.86 E-value=3.7 Score=35.67 Aligned_cols=52 Identities=19% Similarity=0.006 Sum_probs=42.9
Q ss_pred CCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhh
Q 043859 6 SKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQS 58 (484)
Q Consensus 6 ~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~ 58 (484)
++.+|++.+.++..|-....-++..|..+ |++|.++......+.+.+...+.
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~-G~~v~~LG~~vp~~~l~~~~~~~ 138 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESG-GFTVYNLGVDIEPGKFVEAVKKY 138 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHT-TCEEEECCSSBCHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHC-CCEEEECCCCCCHHHHHHHHHHc
Confidence 45699999999999999999999999999 99999999876555554444333
No 81
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=77.45 E-value=25 Score=30.49 Aligned_cols=108 Identities=6% Similarity=-0.033 Sum_probs=61.7
Q ss_pred CeEEEEcCCCccChHHHHHHHHHHHhcCCC--eEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCCCCCCCCCchH
Q 043859 8 PHAVLLASPGVGHVIPVLELGKRLVTLYNF--QVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDISGLVDPDAAV 85 (484)
Q Consensus 8 ~~il~~~~p~~GHv~P~l~La~~L~~r~Gh--~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 85 (484)
|||+|+..+.. .-+.++.++|.+. +| +|..+.+...... .....+..+ +.+..++..... .
T Consensus 2 ~rI~vl~SG~g---~~~~~~l~~l~~~-~~~~~i~~Vvs~~~~~~-~~~~A~~~g----Ip~~~~~~~~~~-----~--- 64 (216)
T 2ywr_A 2 LKIGVLVSGRG---SNLQAIIDAIESG-KVNASIELVISDNPKAY-AIERCKKHN----VECKVIQRKEFP-----S--- 64 (216)
T ss_dssp EEEEEEECSCC---HHHHHHHHHHHTT-SSCEEEEEEEESCTTCH-HHHHHHHHT----CCEEECCGGGSS-----S---
T ss_pred CEEEEEEeCCc---HHHHHHHHHHHhC-CCCCeEEEEEeCCCChH-HHHHHHHcC----CCEEEeCccccc-----c---
Confidence 58888866554 3467788888887 78 8776666543322 223344555 444443321111 0
Q ss_pred HHHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCc-hhhHHHHHHHhCCCeEEEeccc
Q 043859 86 VTIISVIMREIKPAFRSAISALKTTPTALIVDLF-GTESLAIAEELQIPKYVYVGTN 141 (484)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~-~~~~~~~A~~lgIP~v~~~~~~ 141 (484)
.....+.+.+.++++ +||++|+-.+ ..-...+-+.....++-++++.
T Consensus 65 -------r~~~~~~~~~~l~~~--~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpSL 112 (216)
T 2ywr_A 65 -------KKEFEERMALELKKK--GVELVVLAGFMRILSHNFLKYFPNKVINIHPSL 112 (216)
T ss_dssp -------HHHHHHHHHHHHHHT--TCCEEEESSCCSCCCHHHHTTSTTCEEEEESSC
T ss_pred -------hhhhhHHHHHHHHhc--CCCEEEEeCchhhCCHHHHhhccCCeEEEcCCc
Confidence 111223566778888 9999997644 3333344455556677777653
No 82
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=76.79 E-value=12 Score=36.81 Aligned_cols=50 Identities=12% Similarity=0.211 Sum_probs=41.5
Q ss_pred CCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhh
Q 043859 7 KPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQ 57 (484)
Q Consensus 7 ~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~ 57 (484)
.--+++..-|+.|-..-++.+|.....+ |..|.|++.+...+.+...+..
T Consensus 197 G~liiIaG~pG~GKTtlal~ia~~~a~~-g~~vl~fSlEms~~ql~~R~~~ 246 (444)
T 3bgw_A 197 RNFVLIAARPSMGKTAFALKQAKNMSDN-DDVVNLHSLEMGKKENIKRLIV 246 (444)
T ss_dssp SCEEEEEECSSSSHHHHHHHHHHHHHHT-TCEEEEECSSSCTTHHHHHHHH
T ss_pred CcEEEEEeCCCCChHHHHHHHHHHHHHc-CCEEEEEECCCCHHHHHHHHHH
Confidence 3457788889999999999999999998 9999999999877666655443
No 83
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori}
Probab=75.43 E-value=5.7 Score=37.42 Aligned_cols=48 Identities=13% Similarity=0.205 Sum_probs=40.1
Q ss_pred eEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhh
Q 043859 9 HAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQ 57 (484)
Q Consensus 9 ~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~ 57 (484)
-+++..-|+.|-..-++.+|..+... |..|.|++.+...+.+...++.
T Consensus 48 LiiIaG~pG~GKTt~al~ia~~~a~~-g~~Vl~fSlEms~~ql~~Rlls 95 (338)
T 4a1f_A 48 LVIIGARPSMGKTSLMMNMVLSALND-DRGVAVFSLEMSAEQLALRALS 95 (338)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHT-TCEEEEEESSSCHHHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHc-CCeEEEEeCCCCHHHHHHHHHH
Confidence 56777789999999999999999988 9999999999877666555543
No 84
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=75.00 E-value=8.6 Score=38.22 Aligned_cols=94 Identities=11% Similarity=0.027 Sum_probs=55.9
Q ss_pred CCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCCCCCCCCCchHH
Q 043859 7 KPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDISGLVDPDAAVV 86 (484)
Q Consensus 7 ~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 86 (484)
.+||+++.-+ .+ .+.+++.|.+- |-+|+.+++........+...+..+ . ....-.+.+
T Consensus 332 GKrv~i~~~~--~~---~~~l~~~L~El-Gmevv~~gt~~~~~~d~~~~~~~l~----~----------~~~i~~d~d-- 389 (483)
T 3pdi_A 332 GKRVLLYTGG--VK---SWSVVSALQDL-GMKVVATGTKKSTEEDKARIRELMG----D----------DVKMLDEGN-- 389 (483)
T ss_dssp TCEEEEECSS--SC---HHHHHHHHHHH-TCEEEEECBSSSCHHHHHHHHHHSC----S----------SCCBCCSCS--
T ss_pred CCEEEEECCC--ch---HHHHHHHHHHC-CCEEEEEecCCCCHHHHHHHHHhcC----C----------CCEEEeCCC--
Confidence 4688886655 34 34677778888 9999988776543322222222222 0 000001111
Q ss_pred HHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCchhhHHHHHHHhCCCeEEE
Q 043859 87 TIISVIMREIKPAFRSAISALKTTPTALIVDLFGTESLAIAEELQIPKYVY 137 (484)
Q Consensus 87 ~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~~~~~~~~A~~lgIP~v~~ 137 (484)
..++.+.+++. +||++|.... ...+|+++|||++.+
T Consensus 390 ----------~~el~~~i~~~--~pDL~ig~~~---~~~~a~k~gIP~~~~ 425 (483)
T 3pdi_A 390 ----------ARVLLKTVDEY--QADILIAGGR---NMYTALKGRVPFLDI 425 (483)
T ss_dssp ----------HHHHHHHHHHT--TCSEEECCGG---GHHHHHHTTCCBCCC
T ss_pred ----------HHHHHHHHHhc--CCCEEEECCc---hhHHHHHcCCCEEEe
Confidence 22455677778 9999998742 457899999998754
No 85
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=73.47 E-value=5.7 Score=35.43 Aligned_cols=129 Identities=9% Similarity=0.027 Sum_probs=68.0
Q ss_pred CCCCeEEEEcC--CCccChHHHHHHHHHHHhcCCCeEEEEec----CC-----CchhHHHHHh----hhccCCCceEEEe
Q 043859 5 SSKPHAVLLAS--PGVGHVIPVLELGKRLVTLYNFQVTIFVV----AS-----QTSAAESKIL----QSAMSSKLCHVIE 69 (484)
Q Consensus 5 ~~~~~il~~~~--p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~----~~-----~~~~~~~~~~----~~~~~~~~~~~~~ 69 (484)
++.++.+|++. ...|=..-.+.|++.|+++ |.+|.++=+ .. ..+. ..+ ..... +.....
T Consensus 18 ~~m~k~i~ItgT~t~vGKT~vs~gL~~~L~~~-G~~V~~fKPv~~g~~~~~~~~~D~---~~~~~~~~~~~~--g~~~~~ 91 (242)
T 3qxc_A 18 YFQGHMLFISATNTNAGKTTCARLLAQYCNAC-GVKTILLKPIETGVNDAINHSSDA---HLFLQDNRLLDR--SLTLKD 91 (242)
T ss_dssp -CCCEEEEEEESSTTSSHHHHHHHHHHHHHHT-TCCEEEECCEECSCCTTTCCCSHH---HHHHHHHHTTCT--TCCHHH
T ss_pred hhcCcEEEEEeCCCCCcHHHHHHHHHHHHHhC-CCceEEEeeeecCCcccCCCCchH---HHHHHHHHHHhC--CCChHH
Confidence 33455555554 5888999999999999999 999999842 11 1111 111 11100 011001
Q ss_pred cCCCCCCCCCCCCchHHHHHHHHH-HHhhHHHHHHHHhcCCCCeEEEeCCc---------hhhHHHHHHHhCCCeEEEec
Q 043859 70 IPAPDISGLVDPDAAVVTIISVIM-REIKPAFRSAISALKTTPTALIVDLF---------GTESLAIAEELQIPKYVYVG 139 (484)
Q Consensus 70 ~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~~~pD~VI~D~~---------~~~~~~~A~~lgIP~v~~~~ 139 (484)
+....+.. +........+.... ....+.+.+.++++..+.|+||+|.. ......+|+.++.|++.+..
T Consensus 92 ~~p~~~~~--p~sp~~aa~~~g~~~~i~~~~I~~~~~~l~~~~D~vlIEGagGl~~pl~~~~~~adlA~~l~~pVILV~~ 169 (242)
T 3qxc_A 92 ISFYRYHK--VSAPLIAQQEEDPNAPIDTDNLTQRLHNFTKTYDLVIVEGAGGLCVPITLEENMLDFALKLKAKMLLISH 169 (242)
T ss_dssp HCCEECSS--SSCHHHHHHHHCTTCCCCHHHHHHHHHHGGGTCSEEEEECCSCTTCBSSSSCBHHHHHHHHTCEEEEEEC
T ss_pred eeeEEECC--CCChHHHHHHcCCCCcCCHHHHHHHHHHHHhcCCEEEEECCCCccccccccchHHHHHHHcCCCEEEEEc
Confidence 11101100 11111111110000 11234566677766668999998852 12346799999999888876
Q ss_pred cc
Q 043859 140 TN 141 (484)
Q Consensus 140 ~~ 141 (484)
..
T Consensus 170 ~~ 171 (242)
T 3qxc_A 170 DN 171 (242)
T ss_dssp CS
T ss_pred CC
Confidence 43
No 86
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=73.12 E-value=14 Score=34.16 Aligned_cols=36 Identities=17% Similarity=0.195 Sum_probs=26.6
Q ss_pred CCCCeEEEEcCCCccChHHHHHHHHHHHhcCC-CeEEEEecCC
Q 043859 5 SSKPHAVLLASPGVGHVIPVLELGKRLVTLYN-FQVTIFVVAS 46 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P~l~La~~L~~r~G-h~Vt~~~~~~ 46 (484)
|.+|+|+++..+.. .++++.|++..| ++|..+...+
T Consensus 2 m~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~~ 38 (331)
T 2pn1_A 2 MQKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCSP 38 (331)
T ss_dssp TTCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESCT
T ss_pred CccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCCC
Confidence 56799999866654 479999987535 8888776554
No 87
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=72.36 E-value=20 Score=33.63 Aligned_cols=42 Identities=14% Similarity=0.223 Sum_probs=35.3
Q ss_pred CCCeEEEEcC-CCccChHHHHHHHHHHHhcCCCeEEEEecCCCc
Q 043859 6 SKPHAVLLAS-PGVGHVIPVLELGKRLVTLYNFQVTIFVVASQT 48 (484)
Q Consensus 6 ~~~~il~~~~-p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~ 48 (484)
+.++|+|++. ++.|-..-...||..|+++ |++|.++...+..
T Consensus 14 ~~~~i~~~sgkGGvGKTt~a~~lA~~la~~-g~~vllid~D~~~ 56 (334)
T 3iqw_A 14 RSLRWIFVGGKGGVGKTTTSCSLAIQLAKV-RRSVLLLSTDPAH 56 (334)
T ss_dssp TTCCEEEEECSTTSSHHHHHHHHHHHHTTS-SSCEEEEECCSSC
T ss_pred CCeEEEEEeCCCCccHHHHHHHHHHHHHhC-CCcEEEEECCCCC
Confidence 3456776665 7999999999999999999 9999999998643
No 88
>3bh0_A DNAB-like replicative helicase; ATPase, replication; 2.35A {Bacillus phage SPP1}
Probab=72.02 E-value=19 Score=33.31 Aligned_cols=49 Identities=12% Similarity=0.226 Sum_probs=39.7
Q ss_pred CCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHh
Q 043859 7 KPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKIL 56 (484)
Q Consensus 7 ~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~ 56 (484)
.--+++..-|+.|-..-++.+|.....+ |..|.|++.+...+.+...+.
T Consensus 68 G~l~li~G~pG~GKTtl~l~ia~~~a~~-g~~vl~~slE~s~~~l~~R~~ 116 (315)
T 3bh0_A 68 RNFVLIAARPSMGKTAFALKQAKNMSDN-DDVVNLHSLEMGKKENIKRLI 116 (315)
T ss_dssp TCEEEEECCTTSSHHHHHHHHHHHHHTT-TCEEEEEESSSCHHHHHHHHH
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHHHHc-CCeEEEEECCCCHHHHHHHHH
Confidence 3356777789999999999999999988 899999999977665555544
No 89
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=71.33 E-value=4.8 Score=34.94 Aligned_cols=42 Identities=24% Similarity=0.252 Sum_probs=34.6
Q ss_pred CCCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCc
Q 043859 4 SSSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQT 48 (484)
Q Consensus 4 ~~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~ 48 (484)
..+++||++...++.+-+. ...|.+.|+++ | +|.++.++.-.
T Consensus 16 ~l~~k~IllgvTGsiaa~k-~~~ll~~L~~~-g-~V~vv~T~~A~ 57 (209)
T 1mvl_A 16 TPRKPRVLLAASGSVAAIK-FGNLCHCFTEW-A-EVRAVVTKSSL 57 (209)
T ss_dssp ---CCEEEEEECSSGGGGG-HHHHHHHHHTT-S-EEEEEECTGGG
T ss_pred ccCCCEEEEEEeCcHHHHH-HHHHHHHHhcC-C-CEEEEEcchHH
Confidence 4557899999999998776 89999999998 8 99999999644
No 90
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=70.75 E-value=44 Score=29.29 Aligned_cols=36 Identities=11% Similarity=-0.017 Sum_probs=24.5
Q ss_pred HHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhhcc
Q 043859 24 VLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSAM 60 (484)
Q Consensus 24 ~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~ 60 (484)
...+....+++ |-+|.|+++......+........+
T Consensus 53 A~~~i~~~~~~-~~~iLfVgTk~~~~~~V~~~A~~~g 88 (231)
T 3bbn_B 53 ACDLVFDASSR-GKQFLIVGTKNKAADSVARAAIRAR 88 (231)
T ss_dssp HHHHSHHHHTT-TCCEEEECCCTTTHHHHHHHHHHHT
T ss_pred HHHHHHHHHhC-CCEEEEEeCcHHHHHHHHHHHHHhC
Confidence 34444556677 8999999999877665555555554
No 91
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=70.22 E-value=56 Score=28.60 Aligned_cols=110 Identities=5% Similarity=-0.079 Sum_probs=65.2
Q ss_pred CCeEEEEcCCCccChHHHHHHHHHHHhcC-CCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCCCCCCCCCchH
Q 043859 7 KPHAVLLASPGVGHVIPVLELGKRLVTLY-NFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDISGLVDPDAAV 85 (484)
Q Consensus 7 ~~~il~~~~p~~GHv~P~l~La~~L~~r~-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 85 (484)
.|||+|+..+... -+.++.++|.+.. +++|..+.+...... .....+..+ +.+..++...+..
T Consensus 22 ~~rI~~l~SG~g~---~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~-~~~~A~~~g----Ip~~~~~~~~~~~-------- 85 (229)
T 3auf_A 22 MIRIGVLISGSGT---NLQAILDGCREGRIPGRVAVVISDRADAY-GLERARRAG----VDALHMDPAAYPS-------- 85 (229)
T ss_dssp CEEEEEEESSCCH---HHHHHHHHHHTTSSSEEEEEEEESSTTCH-HHHHHHHTT----CEEEECCGGGSSS--------
T ss_pred CcEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEcCCCchH-HHHHHHHcC----CCEEEECcccccc--------
Confidence 4699998766642 4677778887652 478877776533222 223445555 6655444321110
Q ss_pred HHHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCc-hhhHHHHHHHhCCCeEEEeccc
Q 043859 86 VTIISVIMREIKPAFRSAISALKTTPTALIVDLF-GTESLAIAEELQIPKYVYVGTN 141 (484)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~-~~~~~~~A~~lgIP~v~~~~~~ 141 (484)
. ....+.+.+.++++ +||+||+-.+ ..-...+-......++-+.++.
T Consensus 86 r-------~~~~~~~~~~l~~~--~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpSL 133 (229)
T 3auf_A 86 R-------TAFDAALAERLQAY--GVDLVCLAGYMRLVRGPMLTAFPNRILNIHPSL 133 (229)
T ss_dssp H-------HHHHHHHHHHHHHT--TCSEEEESSCCSCCCHHHHHHSTTCEEEEESSC
T ss_pred h-------hhccHHHHHHHHhc--CCCEEEEcChhHhCCHHHHhhccCCEEEEccCc
Confidence 0 11224566778888 9999997654 3444456666777788877653
No 92
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=69.76 E-value=9.7 Score=37.92 Aligned_cols=94 Identities=10% Similarity=0.027 Sum_probs=55.8
Q ss_pred CCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCCCCCCCCCchHH
Q 043859 7 KPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDISGLVDPDAAVV 86 (484)
Q Consensus 7 ~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 86 (484)
.+||+++.-+. | .+.+++.|.+- |-+|+.+++......-.+...+..+ ..... -.+.+
T Consensus 348 GKrv~i~g~~~--~---~~~la~~L~El-Gm~vv~~gt~~~~~~d~~~l~~~~~--~~~~i------------~~~~d-- 405 (492)
T 3u7q_A 348 GKRVMLYIGGL--R---PRHVIGAYEDL-GMEVVGTGYEFAHNDDYDRTMKEMG--DSTLL------------YDDVT-- 405 (492)
T ss_dssp TCEEEECBSSS--H---HHHTHHHHHTT-TCEEEEEEESSCCHHHHHHHHTTSC--TTCEE------------EESCB--
T ss_pred CCEEEEECCCc--h---HHHHHHHHHHC-CCEEEEEeCCCCCHHHHHHHHHhCC--CCcEE------------EcCCC--
Confidence 46888754443 3 56688888887 9999998776432221112212111 00000 00001
Q ss_pred HHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCchhhHHHHHHHhCCCeEEE
Q 043859 87 TIISVIMREIKPAFRSAISALKTTPTALIVDLFGTESLAIAEELQIPKYVY 137 (484)
Q Consensus 87 ~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~~~~~~~~A~~lgIP~v~~ 137 (484)
..++.+.+++. +||++|... ....+|+++|||++.+
T Consensus 406 ----------~~el~~~i~~~--~pDL~ig~~---~~~~ia~k~gIP~~~~ 441 (492)
T 3u7q_A 406 ----------GYEFEEFVKRI--KPDLIGSGI---KEKFIFQKMGIPFREM 441 (492)
T ss_dssp ----------HHHHHHHHHHH--CCSEEEECH---HHHHHHHHTTCCEEES
T ss_pred ----------HHHHHHHHHhc--CCcEEEeCc---chhHHHHHcCCCEEec
Confidence 12456777788 999999973 2457899999998864
No 93
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=69.38 E-value=4.5 Score=35.15 Aligned_cols=41 Identities=17% Similarity=0.131 Sum_probs=35.2
Q ss_pred CCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCc
Q 043859 6 SKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQT 48 (484)
Q Consensus 6 ~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~ 48 (484)
+++||++.-.++.|-+. ...|.+.|+++ |++|.++.++.-.
T Consensus 3 ~~k~IllgvTGaiaa~k-~~~ll~~L~~~-g~eV~vv~T~~A~ 43 (209)
T 3zqu_A 3 GPERITLAMTGASGAQY-GLRLLDCLVQE-EREVHFLISKAAQ 43 (209)
T ss_dssp SCSEEEEEECSSSCHHH-HHHHHHHHHHT-TCEEEEEECHHHH
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHC-CCEEEEEECccHH
Confidence 45789988888888777 89999999999 9999999998533
No 94
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=68.51 E-value=26 Score=30.37 Aligned_cols=109 Identities=10% Similarity=-0.008 Sum_probs=62.1
Q ss_pred CCCCCCeEEEEcCCCccChHHHHHHHHHHHhcC-CCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCCCCCCCC
Q 043859 3 SSSSKPHAVLLASPGVGHVIPVLELGKRLVTLY-NFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDISGLVDP 81 (484)
Q Consensus 3 ~~~~~~~il~~~~p~~GHv~P~l~La~~L~~r~-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 81 (484)
+..+++||+++..+..+ .+.+|.+++.+.. +++|..+.+...... .....+..+ +.+..++...+ .
T Consensus 4 ~~~~~~ri~vl~SG~gs---nl~all~~~~~~~~~~~I~~Vis~~~~a~-~l~~A~~~g----Ip~~~~~~~~~----~- 70 (215)
T 3kcq_A 4 SMKKELRVGVLISGRGS---NLEALAKAFSTEESSVVISCVISNNAEAR-GLLIAQSYG----IPTFVVKRKPL----D- 70 (215)
T ss_dssp ---CCEEEEEEESSCCH---HHHHHHHHTCCC-CSEEEEEEEESCTTCT-HHHHHHHTT----CCEEECCBTTB----C-
T ss_pred CCCCCCEEEEEEECCcH---HHHHHHHHHHcCCCCcEEEEEEeCCcchH-HHHHHHHcC----CCEEEeCcccC----C-
Confidence 34556788887766533 2556666765531 378888887532211 112334444 55544432111 0
Q ss_pred CchHHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCc-hhhHHHHHHHhCCCeEEEeccc
Q 043859 82 DAAVVTIISVIMREIKPAFRSAISALKTTPTALIVDLF-GTESLAIAEELQIPKYVYVGTN 141 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~-~~~~~~~A~~lgIP~v~~~~~~ 141 (484)
.+.+.+.++++ +||+||+-.+ ..-...+-....-.++-++++.
T Consensus 71 ---------------~~~~~~~L~~~--~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpSL 114 (215)
T 3kcq_A 71 ---------------IEHISTVLREH--DVDLVCLAGFMSILPEKFVTDWHHKIINIHPSL 114 (215)
T ss_dssp ---------------HHHHHHHHHHT--TCSEEEESSCCSCCCHHHHHHTTTSEEEEESSC
T ss_pred ---------------hHHHHHHHHHh--CCCEEEEeCCceEeCHHHHhhccCCeEEECccc
Confidence 05667788888 9999997654 3444456666777788877653
No 95
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=67.93 E-value=33 Score=32.73 Aligned_cols=36 Identities=14% Similarity=0.042 Sum_probs=27.9
Q ss_pred CCCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecC
Q 043859 4 SSSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVA 45 (484)
Q Consensus 4 ~~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~ 45 (484)
+|+.++|+++..+.. .+.+++++++. |++|+++..+
T Consensus 4 m~~~~~ilI~g~g~~-----~~~~~~a~~~~-G~~~v~v~~~ 39 (403)
T 4dim_A 4 MYDNKRLLILGAGRG-----QLGLYKAAKEL-GIHTIAGTMP 39 (403)
T ss_dssp --CCCEEEEECCCGG-----GHHHHHHHHHH-TCEEEEEECS
T ss_pred ccCCCEEEEECCcHh-----HHHHHHHHHHC-CCEEEEEcCC
Confidence 356789999877754 36699999999 9999999754
No 96
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=67.24 E-value=25 Score=29.86 Aligned_cols=45 Identities=11% Similarity=0.136 Sum_probs=35.2
Q ss_pred CCCCCCCCeEEEEcCC-CccChHHHHHHHHHHHhcCCCeEEEEecCC
Q 043859 1 MESSSSKPHAVLLASP-GVGHVIPVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 1 m~~~~~~~~il~~~~p-~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
|-..+.+-+|.++..+ +.|-..-++.+++.+..+ |.+|.++.+.-
T Consensus 1 ~~~~~~~g~i~v~~G~mgsGKTT~ll~~a~r~~~~-g~kV~v~k~~~ 46 (191)
T 1xx6_A 1 MYRPKDHGWVEVIVGPMYSGKSEELIRRIRRAKIA-KQKIQVFKPEI 46 (191)
T ss_dssp -CCCTTCCEEEEEECSTTSSHHHHHHHHHHHHHHT-TCCEEEEEEC-
T ss_pred CCcCCCCCEEEEEECCCCCcHHHHHHHHHHHHHHC-CCEEEEEEecc
Confidence 3333444567777777 999999999999999999 99999998553
No 97
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=66.16 E-value=12 Score=36.69 Aligned_cols=49 Identities=12% Similarity=0.249 Sum_probs=38.8
Q ss_pred CCeEEEEcCCCccChHHHHHHHHHHHh-cCCCeEEEEecCCCchhHHHHHh
Q 043859 7 KPHAVLLASPGVGHVIPVLELGKRLVT-LYNFQVTIFVVASQTSAAESKIL 56 (484)
Q Consensus 7 ~~~il~~~~p~~GHv~P~l~La~~L~~-r~Gh~Vt~~~~~~~~~~~~~~~~ 56 (484)
.--+++...|+.|-..-++.+|..... . |..|.|++.+...+.+...++
T Consensus 200 G~l~ii~G~pg~GKT~lal~ia~~~a~~~-g~~vl~~slE~~~~~l~~R~~ 249 (444)
T 2q6t_A 200 GSLNIIAARPAMGKTAFALTIAQNAALKE-GVGVGIYSLEMPAAQLTLRMM 249 (444)
T ss_dssp TCEEEEEECTTSCHHHHHHHHHHHHHHTT-CCCEEEEESSSCHHHHHHHHH
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHHHHhC-CCeEEEEECCCCHHHHHHHHH
Confidence 345677788999999999999999875 5 789999999977665555543
No 98
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=65.66 E-value=20 Score=37.19 Aligned_cols=44 Identities=14% Similarity=0.063 Sum_probs=31.0
Q ss_pred eEecCCcchh---------hhccCCCcccccccc---C-chhHHHHHhcCCceeecccc
Q 043859 346 VVVPQWAPQI---------DILSHPSVGGFLSHC---G-WNSTLESITNGVPMIVWPLY 391 (484)
Q Consensus 346 v~v~~~ipq~---------~vL~~~~~~~~ItHg---G-~gs~~eal~~GvP~v~~P~~ 391 (484)
+.+..|++.. +++..++ +||.-. | -.+.+||+++|+|+|+.-..
T Consensus 495 If~P~~L~~~d~lf~~d~~~~~~~ad--vfV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 495 IFHPEFLNANNPILGLDYDEFVRGCH--LGVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp EECCSCCCTTCSSSCCCHHHHHHHCS--EEECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred EEeccccCCCCccchhHHHHHHhhce--EEEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 3444777653 5788899 565432 3 34899999999999987543
No 99
>2j9r_A Thymidine kinase; TK1, DNK, lasso, transferase, ATP-binding, deoxyribonucleoside kinase, DNA synthesis, phosphate accept nucleotide-binding; HET: THM; 2.7A {Bacillus anthracis} PDB: 2ja1_A*
Probab=65.33 E-value=21 Score=30.94 Aligned_cols=40 Identities=8% Similarity=0.032 Sum_probs=33.9
Q ss_pred CCCeEEEEcCC-CccChHHHHHHHHHHHhcCCCeEEEEecCC
Q 043859 6 SKPHAVLLASP-GVGHVIPVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 6 ~~~~il~~~~p-~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
.+-+|.|++.+ +.|=..-++.++..+..+ |.+|.++.+..
T Consensus 26 ~~G~l~vitG~MgsGKTT~lL~~a~r~~~~-g~kVli~k~~~ 66 (214)
T 2j9r_A 26 QNGWIEVICGSMFSGKSEELIRRVRRTQFA-KQHAIVFKPCI 66 (214)
T ss_dssp CSCEEEEEECSTTSCHHHHHHHHHHHHHHT-TCCEEEEECC-
T ss_pred CCCEEEEEECCCCCcHHHHHHHHHHHHHHC-CCEEEEEEecc
Confidence 34468777887 999999999999999999 99999998653
No 100
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=64.95 E-value=28 Score=32.77 Aligned_cols=42 Identities=14% Similarity=0.185 Sum_probs=35.5
Q ss_pred CCCCeEEEEcC-CCccChHHHHHHHHHHH--hcCCCeEEEEecCCC
Q 043859 5 SSKPHAVLLAS-PGVGHVIPVLELGKRLV--TLYNFQVTIFVVASQ 47 (484)
Q Consensus 5 ~~~~~il~~~~-p~~GHv~P~l~La~~L~--~r~Gh~Vt~~~~~~~ 47 (484)
.++++|+|++. ++.|-..-...||..|+ ++ |++|.++...+.
T Consensus 15 ~~~~~i~~~~gkGGvGKTt~a~~lA~~la~~~~-g~~vllid~D~~ 59 (348)
T 3io3_A 15 HDSLKWIFVGGKGGVGKTTTSSSVAVQLALAQP-NEQFLLISTDPA 59 (348)
T ss_dssp CTTCSEEEEECSTTSSHHHHHHHHHHHHHHHCT-TSCEEEEECCSS
T ss_pred CCCcEEEEEeCCCCCcHHHHHHHHHHHHHHhcC-CCeEEEEECCCC
Confidence 34567777766 79999999999999999 88 999999999853
No 101
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=63.00 E-value=8.9 Score=32.18 Aligned_cols=50 Identities=10% Similarity=0.074 Sum_probs=39.1
Q ss_pred CeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhhc
Q 043859 8 PHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSA 59 (484)
Q Consensus 8 ~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~ 59 (484)
+||++.-.++.|=+. ...+.+.|+++ |++|+++.++.-...+...-++..
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~~-g~~V~vv~T~~A~~fi~~~~l~~l 55 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKSK-FDEVNVIASTNGRKFINGEILKQF 55 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTTT-CSEEEEEECTGGGGGSCHHHHHHH
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHHC-CCEEEEEECcCHHHHhhHHHHHHh
Confidence 689888888877665 88999999999 999999999976655544444443
No 102
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=62.42 E-value=33 Score=29.79 Aligned_cols=111 Identities=17% Similarity=0.061 Sum_probs=61.8
Q ss_pred CCCCCeEEEEcCCCccChHHHHHHHHHHHh-cCCCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCCCCCCCCC
Q 043859 4 SSSKPHAVLLASPGVGHVIPVLELGKRLVT-LYNFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDISGLVDPD 82 (484)
Q Consensus 4 ~~~~~~il~~~~p~~GHv~P~l~La~~L~~-r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 82 (484)
...+|||+++..+..+. +.+|.+++.+ . +++|..+.+.+.... ....+..+ +.+..++.....
T Consensus 9 ~~~~~ri~vl~SG~gsn---l~all~~~~~~~-~~eI~~Vis~~~a~~--~~~A~~~g----Ip~~~~~~~~~~------ 72 (215)
T 3da8_A 9 PSAPARLVVLASGTGSL---LRSLLDAAVGDY-PARVVAVGVDRECRA--AEIAAEAS----VPVFTVRLADHP------ 72 (215)
T ss_dssp CCSSEEEEEEESSCCHH---HHHHHHHSSTTC-SEEEEEEEESSCCHH--HHHHHHTT----CCEEECCGGGSS------
T ss_pred CCCCcEEEEEEeCChHH---HHHHHHHHhccC-CCeEEEEEeCCchHH--HHHHHHcC----CCEEEeCccccc------
Confidence 34577999887776443 3444455433 3 578988887764322 23344555 444443211100
Q ss_pred chHHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCc-hhhHHHHHHHhCCCeEEEeccc
Q 043859 83 AAVVTIISVIMREIKPAFRSAISALKTTPTALIVDLF-GTESLAIAEELQIPKYVYVGTN 141 (484)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~-~~~~~~~A~~lgIP~v~~~~~~ 141 (484)
.. ....+.+.+.++++ +||++|+-.+ ..-...+-+.....++-++++.
T Consensus 73 --~r-------~~~d~~~~~~l~~~--~~Dlivlagy~~iL~~~~l~~~~~~~iNiHpSL 121 (215)
T 3da8_A 73 --SR-------DAWDVAITAATAAH--EPDLVVSAGFMRILGPQFLSRFYGRTLNTHPAL 121 (215)
T ss_dssp --SH-------HHHHHHHHHHHHTT--CCSEEEEEECCSCCCHHHHHHHTTTEEEEESSC
T ss_pred --ch-------hhhhHHHHHHHHhh--CCCEEEEcCchhhCCHHHHhhccCCeEEeCccc
Confidence 00 11134567788888 9999997543 3334455556666678777653
No 103
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=62.28 E-value=75 Score=28.29 Aligned_cols=35 Identities=29% Similarity=0.349 Sum_probs=25.4
Q ss_pred CCCCeEEE-eCCc-hhhHHHHHHHhCCCeEEEecccH
Q 043859 108 KTTPTALI-VDLF-GTESLAIAEELQIPKYVYVGTNA 142 (484)
Q Consensus 108 ~~~pD~VI-~D~~-~~~~~~~A~~lgIP~v~~~~~~~ 142 (484)
...||+|| .|+. ..-+..=|.++|||+|.+.-+++
T Consensus 156 ~~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn~ 192 (256)
T 2vqe_B 156 KRLPDAIFVVDPTKEAIAVREARKLFIPVIALADTDS 192 (256)
T ss_dssp SSCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTTS
T ss_pred ccCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCCC
Confidence 46889877 6654 33456788999999999876544
No 104
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=60.96 E-value=9.8 Score=30.73 Aligned_cols=45 Identities=18% Similarity=0.286 Sum_probs=31.7
Q ss_pred CCCCCCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCC
Q 043859 1 MESSSSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 1 m~~~~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
|..++.+.-.+++..+..-.+.+.+.+|...++. |++|+++.+-.
T Consensus 2 ~~~~m~~kl~II~~sg~~d~~~~a~~lA~~Aaa~-g~eV~iF~t~~ 46 (144)
T 2qs7_A 2 MAEEKKKKLSIIVFSGTIDKLMPVGILTSGAAAS-GYEVNLFFTFW 46 (144)
T ss_dssp -----CCEEEEEECCCSHHHHHHHHHHHHHHHHT-TCEEEEEECHH
T ss_pred ccccccCCEEEEEEcCCHHHHHHHHHHHHHHHHc-CCcEEEEEehH
Confidence 4444444344444555688899999999999999 99999999884
No 105
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=60.68 E-value=61 Score=26.72 Aligned_cols=143 Identities=14% Similarity=0.138 Sum_probs=74.8
Q ss_pred CeEEEEecCCCCCCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCCCCCCcccCCCCCCCCCccCCCchhHHHhhcCCceEe
Q 043859 269 ESVLYVSFGSGGTLTYEQITELAWGLELSQQRFIWVVRLPNETTGDGSFFTAGSGAGDDDLSSLLPDGFLSRTLDIGVVV 348 (484)
Q Consensus 269 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v 348 (484)
+|.|-|-+||.. +....+++...|+..|..+=..+.. ....|+.+.+
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~S----------------------aHR~p~~l~~--------- 57 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVS----------------------AHRTPDYMFE--------- 57 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC----------------------TTTSHHHHHH---------
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEe----------------------ccCCHHHHHH---------
Confidence 455666677633 5567888888888888876554421 2445553322
Q ss_pred cCCcchhhhccCCCccccccccCch----hHHHHHhcCCceeecccccc--cchhHHHHHhh--hcceEEeeecCCC--C
Q 043859 349 PQWAPQIDILSHPSVGGFLSHCGWN----STLESITNGVPMIVWPLYSE--QRMNATILTEE--LGVAIRSKVLPSK--G 418 (484)
Q Consensus 349 ~~~ipq~~vL~~~~~~~~ItHgG~g----s~~eal~~GvP~v~~P~~~D--Q~~na~rv~~~--~G~g~~l~~~~~~--~ 418 (484)
|+.+.+- ...+ ++|.=+|.- ++.-++ .-+|+|.+|.... ....+..-.-+ -|+. +.+...+ .
T Consensus 58 --~~~~a~~-~g~~--ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlSivqmP~Gvp--VatV~I~~a~ 129 (170)
T 1xmp_A 58 --YAETARE-RGLK--VIIAGAGGAAHLPGMVAAK-TNLPVIGVPVQSKALNGLDSLLSIVQMPGGVP--VATVAIGKAG 129 (170)
T ss_dssp --HHHHTTT-TTCC--EEEEEEESSCCHHHHHHTT-CCSCEEEEEECCTTTTTHHHHHHHHCCCTTCC--CEECCSSHHH
T ss_pred --HHHHHHh-CCCc--EEEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCe--eEEEecCCcc
Confidence 2111110 1122 466666543 333333 3689999998542 22222211114 3444 3221111 2
Q ss_pred ccCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhh
Q 043859 419 VVGREEIKTMVRRILVDEEGYEIRAKVKELQRSAQKAW 456 (484)
Q Consensus 419 ~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~ 456 (484)
..++.-++..|. -+.|+. ++++.+.+++..++.+
T Consensus 130 ~~nAallAaqIl-a~~d~~---l~~kl~~~r~~~~~~v 163 (170)
T 1xmp_A 130 STNAGLLAAQIL-GSFHDD---IHDALELRREAIEKDV 163 (170)
T ss_dssp HHHHHHHHHHHH-HTTCHH---HHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHH-ccCCHH---HHHHHHHHHHHHHHHH
Confidence 244455554443 345655 8888888888866555
No 106
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=60.42 E-value=56 Score=28.12 Aligned_cols=113 Identities=11% Similarity=0.013 Sum_probs=62.7
Q ss_pred CCCCCeEEEEcCCCccChHHHHHHHHHHHhcC-CCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCCCCCCCCC
Q 043859 4 SSSKPHAVLLASPGVGHVIPVLELGKRLVTLY-NFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDISGLVDPD 82 (484)
Q Consensus 4 ~~~~~~il~~~~p~~GHv~P~l~La~~L~~r~-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 82 (484)
.|+++||+++..+.-+- +.+|.+++.+.. .++|..+.+...... .....+..+ +.+..++...+..
T Consensus 4 ~m~~~ri~vl~SG~gsn---l~all~~~~~~~l~~~I~~Visn~~~a~-~l~~A~~~g----Ip~~~~~~~~~~~----- 70 (209)
T 4ds3_A 4 SMKRNRVVIFISGGGSN---MEALIRAAQAPGFPAEIVAVFSDKAEAG-GLAKAEAAG----IATQVFKRKDFAS----- 70 (209)
T ss_dssp --CCEEEEEEESSCCHH---HHHHHHHHTSTTCSEEEEEEEESCTTCT-HHHHHHHTT----CCEEECCGGGSSS-----
T ss_pred cCCCccEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEECCcccH-HHHHHHHcC----CCEEEeCccccCC-----
Confidence 36678998887665433 566667776531 378888887532221 112344555 5555444211110
Q ss_pred chHHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCc-hhhHHHHHHHhCCCeEEEeccc
Q 043859 83 AAVVTIISVIMREIKPAFRSAISALKTTPTALIVDLF-GTESLAIAEELQIPKYVYVGTN 141 (484)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~-~~~~~~~A~~lgIP~v~~~~~~ 141 (484)
.....+.+.+.++++ +||+||+-.+ ..-...+-+...-.++-++++.
T Consensus 71 ----------r~~~d~~~~~~l~~~--~~Dliv~agy~~il~~~~l~~~~~~~iNiHpSL 118 (209)
T 4ds3_A 71 ----------KEAHEDAILAALDVL--KPDIICLAGYMRLLSGRFIAPYEGRILNIHPSL 118 (209)
T ss_dssp ----------HHHHHHHHHHHHHHH--CCSEEEESSCCSCCCHHHHGGGTTCEEEEESSC
T ss_pred ----------HHHHHHHHHHHHHhc--CCCEEEEeccccCcCHHHHhhccCCeEEECCcc
Confidence 011124677888889 9999997654 3333445555666677777653
No 107
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=59.71 E-value=10 Score=32.59 Aligned_cols=42 Identities=26% Similarity=0.190 Sum_probs=34.4
Q ss_pred CCCCeEEEEcCCCccChH-HHHHHHHHHHhcCCCeEEEEecCCCc
Q 043859 5 SSKPHAVLLASPGVGHVI-PVLELGKRLVTLYNFQVTIFVVASQT 48 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~-P~l~La~~L~~r~Gh~Vt~~~~~~~~ 48 (484)
.+++||++.-.++ +..+ =.+.+.+.|+++ |++|+++.++.-.
T Consensus 5 l~~k~I~lgiTGs-~aa~~k~~~ll~~L~~~-g~eV~vv~T~~A~ 47 (201)
T 3lqk_A 5 FAGKHVGFGLTGS-HCTYHEVLPQMERLVEL-GAKVTPFVTHTVQ 47 (201)
T ss_dssp CTTCEEEEECCSC-GGGGGGTHHHHHHHHHT-TCEEEEECSSCSC
T ss_pred cCCCEEEEEEECh-HHHHHHHHHHHHHHhhC-CCEEEEEEChhHH
Confidence 4467888888887 4555 789999999999 9999999998644
No 108
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=59.36 E-value=29 Score=32.17 Aligned_cols=101 Identities=9% Similarity=0.070 Sum_probs=56.6
Q ss_pred CCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchh---------HHHHHhhhccCCCceEEEecCCCCCCC
Q 043859 7 KPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSA---------AESKILQSAMSSKLCHVIEIPAPDISG 77 (484)
Q Consensus 7 ~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~p~~~~~~ 77 (484)
+|||+|+..|..+- ..-++|.++ ||+|..+.+.+.+.. -.+...+..+ +.+... ..
T Consensus 2 ~mrivf~Gtp~fa~-----~~L~~L~~~-~~~v~~Vvt~pd~~~grg~~l~~~~v~~~A~~~g----Ipv~~~-----~~ 66 (314)
T 3tqq_A 2 SLKIVFAGTPQFAV-----PTLRALIDS-SHRVLAVYTQPDRPSGRGQKIMESPVKEIARQNE----IPIIQP-----FS 66 (314)
T ss_dssp CCEEEEEECSGGGH-----HHHHHHHHS-SSEEEEEECCCC----------CCHHHHHHHHTT----CCEECC-----SC
T ss_pred CcEEEEECCCHHHH-----HHHHHHHHC-CCeEEEEEeCCCCccccCCccCCCHHHHHHHHcC----CCEECc-----cc
Confidence 69999998886653 445778888 899998887543321 1112223333 332210 11
Q ss_pred CCCCCchHHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCc-hhhHHHHHHHhCCCeEEEeccc
Q 043859 78 LVDPDAAVVTIISVIMREIKPAFRSAISALKTTPTALIVDLF-GTESLAIAEELQIPKYVYVGTN 141 (484)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~-~~~~~~~A~~lgIP~v~~~~~~ 141 (484)
. . .+.+.+.++++ +||++|+=.+ ..-...+-+.....++.++++.
T Consensus 67 ~-~----------------~~~~~~~l~~~--~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpSl 112 (314)
T 3tqq_A 67 L-R----------------DEVEQEKLIAM--NADVMVVVAYGLILPKKALNAFRLGCVNVHASL 112 (314)
T ss_dssp S-S----------------SHHHHHHHHTT--CCSEEEEESCCSCCCHHHHTSSTTCEEEEESSC
T ss_pred C-C----------------CHHHHHHHHhc--CCCEEEEcCcccccCHHHHhhCcCCEEEecCcc
Confidence 1 0 02455777888 9999997543 2222333333444477777653
No 109
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=59.31 E-value=8.4 Score=31.21 Aligned_cols=35 Identities=14% Similarity=0.095 Sum_probs=27.7
Q ss_pred CCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecC
Q 043859 5 SSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVA 45 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~ 45 (484)
|++.||+++-. |++- ..+++.|.++ ||+|+++...
T Consensus 1 ~~~~~vlI~G~---G~vG--~~la~~L~~~-g~~V~vid~~ 35 (153)
T 1id1_A 1 HRKDHFIVCGH---SILA--INTILQLNQR-GQNVTVISNL 35 (153)
T ss_dssp CCCSCEEEECC---SHHH--HHHHHHHHHT-TCCEEEEECC
T ss_pred CCCCcEEEECC---CHHH--HHHHHHHHHC-CCCEEEEECC
Confidence 45678988844 5554 6889999999 9999999875
No 110
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=59.23 E-value=21 Score=31.19 Aligned_cols=38 Identities=13% Similarity=0.156 Sum_probs=32.2
Q ss_pred CeEEEEcCC-CccChHHHHHHHHHHHhcCCCeEEEEecCC
Q 043859 8 PHAVLLASP-GVGHVIPVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 8 ~~il~~~~p-~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
-.+.+++.+ +.|=..-++.++..+..+ |..|.++.+..
T Consensus 12 G~i~litG~mGsGKTT~ll~~~~r~~~~-g~kVli~~~~~ 50 (223)
T 2b8t_A 12 GWIEFITGPMFAGKTAELIRRLHRLEYA-DVKYLVFKPKI 50 (223)
T ss_dssp CEEEEEECSTTSCHHHHHHHHHHHHHHT-TCCEEEEEECC
T ss_pred cEEEEEECCCCCcHHHHHHHHHHHHHhc-CCEEEEEEecc
Confidence 356666665 999999999999999999 99999997765
No 111
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=58.93 E-value=1.4e+02 Score=29.76 Aligned_cols=96 Identities=16% Similarity=0.162 Sum_probs=58.1
Q ss_pred CCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHH---HhhhccCCCceEEEecCCCCCCCCCCCCc
Q 043859 7 KPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESK---ILQSAMSSKLCHVIEIPAPDISGLVDPDA 83 (484)
Q Consensus 7 ~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 83 (484)
.+||+++. .-.-.++|++.|.+- |.+|+.+.+....+...+. +++..+.+....+. ...
T Consensus 360 Gkrv~i~g-----d~~~~~~la~~L~El-Gm~vv~v~~~~~~~~~~~~~~~ll~~~~~~~~~~v~------------~~~ 421 (519)
T 1qgu_B 360 GKKFGLYG-----DPDFVMGLTRFLLEL-GCEPTVILSHNANKRWQKAMNKMLDASPYGRDSEVF------------INC 421 (519)
T ss_dssp TCEEEEES-----CHHHHHHHHHHHHHT-TCEEEEEEETTCCHHHHHHHHHHHHHSTTCTTCEEE------------ESC
T ss_pred CCEEEEEC-----CchHHHHHHHHHHHC-CCEEEEEEeCCCCHHHHHHHHHHHHhcCCCCCCEEE------------ECC
Confidence 45788773 334567888888888 9999987777654433322 22333211111111 000
Q ss_pred hHHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCchhhHHHHHHHh-------CCCeEEE
Q 043859 84 AVVTIISVIMREIKPAFRSAISALKTTPTALIVDLFGTESLAIAEEL-------QIPKYVY 137 (484)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~~~~~~~~A~~l-------gIP~v~~ 137 (484)
+ ...+++.+++. +||++|.+.. +..+|+++ |||++.+
T Consensus 422 d------------~~~l~~~i~~~--~pDLiig~~~---~~~~a~~~~~~g~~~gip~v~i 465 (519)
T 1qgu_B 422 D------------LWHFRSLMFTR--QPDFMIGNSY---GKFIQRDTLAKGKAFEVPLIRL 465 (519)
T ss_dssp C------------HHHHHHHHHHH--CCSEEEECGG---GHHHHHHHHHHCGGGCCCEEEC
T ss_pred C------------HHHHHHHHhhc--CCCEEEECcc---hHHHHHHhhcccccCCCCeEEe
Confidence 1 12355667777 9999999853 46678888 9999865
No 112
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=58.70 E-value=1e+02 Score=30.12 Aligned_cols=149 Identities=12% Similarity=0.029 Sum_probs=76.5
Q ss_pred CCeEEEEecCCCCCCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCCCCCCcccCCCCCCCCCccCCCchhHHHhhcCCceE
Q 043859 268 SESVLYVSFGSGGTLTYEQITELAWGLELSQQRFIWVVRLPNETTGDGSFFTAGSGAGDDDLSSLLPDGFLSRTLDIGVV 347 (484)
Q Consensus 268 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~ 347 (484)
.+.++.|..| ..-...++.|...|..+.++-. . ..+.+.+.....++.
T Consensus 12 ~~~vlVvGgG-------~va~~k~~~L~~~ga~V~vi~~-~------------------------~~~~~~~l~~~~~i~ 59 (457)
T 1pjq_A 12 DRDCLIVGGG-------DVAERKARLLLEAGARLTVNAL-T------------------------FIPQFTVWANEGMLT 59 (457)
T ss_dssp TCEEEEECCS-------HHHHHHHHHHHHTTBEEEEEES-S------------------------CCHHHHHHHTTTSCE
T ss_pred CCEEEEECCC-------HHHHHHHHHHHhCcCEEEEEcC-C------------------------CCHHHHHHHhcCCEE
Confidence 4568888777 3344455666677877666531 1 112333322222333
Q ss_pred ecCCcchhhhccCCCccccccccCchh-----HHHHHhcCCceee--cccccccchhHHHHHhhhc--ceEEeeecCCCC
Q 043859 348 VPQWAPQIDILSHPSVGGFLSHCGWNS-----TLESITNGVPMIV--WPLYSEQRMNATILTEELG--VAIRSKVLPSKG 418 (484)
Q Consensus 348 v~~~ipq~~vL~~~~~~~~ItHgG~gs-----~~eal~~GvP~v~--~P~~~DQ~~na~rv~~~~G--~g~~l~~~~~~~ 418 (484)
+..---+.+-|..++ ++|.--|.-. ..+|-..|+|+-+ -|-..|...-|. + ++-+ +|+. +..+ .
T Consensus 60 ~~~~~~~~~~l~~~~--lVi~at~~~~~n~~i~~~a~~~~i~vn~~d~~e~~~~~~pa~-~-~~~~l~iaIs--T~Gk-s 132 (457)
T 1pjq_A 60 LVEGPFDETLLDSCW--LAIAATDDDTVNQRVSDAAESRRIFCNVVDAPKAASFIMPSI-I-DRSPLMVAVS--SGGT-S 132 (457)
T ss_dssp EEESSCCGGGGTTCS--EEEECCSCHHHHHHHHHHHHHTTCEEEETTCTTSSSEECCEE-E-EETTEEEEEE--CTTS-C
T ss_pred EEECCCCccccCCcc--EEEEcCCCHHHHHHHHHHHHHcCCEEEECCCcccCceEeeeE-E-EeCCeEEEEE--CCCC-C
Confidence 321111223456677 6777777654 3445567888632 232333222111 1 1222 3433 2100 1
Q ss_pred ccCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhh
Q 043859 419 VVGREEIKTMVRRILVDEEGYEIRAKVKELQRSAQKAW 456 (484)
Q Consensus 419 ~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~ 456 (484)
..-+..|++.|++.|...-+ .+.+.+.++++.+++..
T Consensus 133 p~la~~ir~~ie~~l~~~~~-~~~~~~~~~R~~~~~~~ 169 (457)
T 1pjq_A 133 PVLARLLREKLESLLPQHLG-QVARYAGQLRARVKKQF 169 (457)
T ss_dssp HHHHHHHHHHHHHHSCTTHH-HHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHhcchhHH-HHHHHHHHHHHHHHhhC
Confidence 22257799999988865322 37788888888877544
No 113
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=58.66 E-value=84 Score=28.11 Aligned_cols=40 Identities=15% Similarity=0.268 Sum_probs=30.8
Q ss_pred HHHHHHHHhcCCCCeEEEeCCchh------hHHHHHHHhCCCeEEEec
Q 043859 98 PAFRSAISALKTTPTALIVDLFGT------ESLAIAEELQIPKYVYVG 139 (484)
Q Consensus 98 ~~l~~~l~~~~~~pD~VI~D~~~~------~~~~~A~~lgIP~v~~~~ 139 (484)
..+..++++. +||+||+-.... .+..+|.+||+|.++..+
T Consensus 102 ~~La~~i~~~--~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 147 (264)
T 1o97_C 102 RILTEVIKKE--APDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVA 147 (264)
T ss_dssp HHHHHHHHHH--CCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHhc--CCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceE
Confidence 4456677777 899999875443 466899999999998664
No 114
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=58.47 E-value=13 Score=26.02 Aligned_cols=50 Identities=24% Similarity=0.288 Sum_probs=34.8
Q ss_pred hcCCceeecccccccchhHHHH--HhhhcceEEeeecCCCCccCHHHHHHHHHHHhc
Q 043859 380 TNGVPMIVWPLYSEQRMNATIL--TEELGVAIRSKVLPSKGVVGREEIKTMVRRILV 434 (484)
Q Consensus 380 ~~GvP~v~~P~~~DQ~~na~rv--~~~~G~g~~l~~~~~~~~~~~~~l~~~i~~vl~ 434 (484)
-+|+|++++--.+.|.+....- +..-|+...+- ...+++++...+++.|.
T Consensus 49 dngkplvvfvngasqndvnefqneakkegvsydvl-----kstdpeeltqrvreflk 100 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVL-----KSTDPEELTQRVREFLK 100 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEEE-----ECCCHHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHHhcCcchhhh-----ccCCHHHHHHHHHHHHH
Confidence 3699999998888887654433 12335554443 56789999998888874
No 115
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=58.32 E-value=6.7 Score=33.60 Aligned_cols=51 Identities=2% Similarity=-0.001 Sum_probs=38.7
Q ss_pred CCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhh
Q 043859 5 SSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQ 57 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~ 57 (484)
.+++||++...++.|=+. ...+.+.|+++ |++|.++.++.-...+...-++
T Consensus 6 l~~k~IllgvTGs~aa~k-~~~l~~~L~~~-g~~V~vv~T~~A~~fi~~~~~~ 56 (194)
T 1p3y_1 6 LKDKKLLIGICGSISSVG-ISSYLLYFKSF-FKEIRVVMTKTAEDLIPAHTVS 56 (194)
T ss_dssp GGGCEEEEEECSCGGGGG-THHHHHHHTTT-SSEEEEEECHHHHHHSCHHHHG
T ss_pred cCCCEEEEEEECHHHHHH-HHHHHHHHHHC-CCEEEEEEchhHHHHHHHHHHH
Confidence 456789888888887775 78999999999 9999999998644443333333
No 116
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=58.01 E-value=40 Score=33.30 Aligned_cols=107 Identities=16% Similarity=0.104 Sum_probs=67.0
Q ss_pred ecCCcchh---hhccCCCcccccc---ccCch-hHHHHHhcCC-----ceeecccccccchhHHHHHhhhcceEEeeecC
Q 043859 348 VPQWAPQI---DILSHPSVGGFLS---HCGWN-STLESITNGV-----PMIVWPLYSEQRMNATILTEELGVAIRSKVLP 415 (484)
Q Consensus 348 v~~~ipq~---~vL~~~~~~~~It---HgG~g-s~~eal~~Gv-----P~v~~P~~~DQ~~na~rv~~~~G~g~~l~~~~ 415 (484)
+..++++. +++..+++ |+. .=|+| ++.||+++|+ |+|+--.. ..+. ++.-|+.++
T Consensus 336 ~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~----G~~~----~l~~g~lv~--- 402 (482)
T 1uqt_A 336 LNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFA----GAAN----ELTSALIVN--- 402 (482)
T ss_dssp ECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTB----GGGG----TCTTSEEEC---
T ss_pred eCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCC----CCHH----HhCCeEEEC---
Confidence 45778765 47888995 443 34555 8899999998 66654322 2222 222456654
Q ss_pred CCCccCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHhhh
Q 043859 416 SKGVVGREEIKTMVRRILVDEEGYEIRAKVKELQRSAQKAWTRESGSSYSSLARLAKECGMM 477 (484)
Q Consensus 416 ~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~~~g~~~~~~~~~~~~~~~~ 477 (484)
--+.++++++|.++|+++.. ..+++.++.++.++ . .+...-++.+++.+++.
T Consensus 403 ---p~d~~~lA~ai~~lL~~~~~-~r~~~~~~~~~~v~----~--~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 403 ---PYDRDEVAAALDRALTMSLA-ERISRHAEMLDVIV----K--NDINHWQECFISDLKQI 454 (482)
T ss_dssp ---TTCHHHHHHHHHHHHTCCHH-HHHHHHHHHHHHHH----H--TCHHHHHHHHHHHHHHS
T ss_pred ---CCCHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHH----h--CCHHHHHHHHHHHHHhc
Confidence 34789999999999986431 13344444444432 2 35667778888887766
No 117
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=57.67 E-value=92 Score=26.89 Aligned_cols=110 Identities=12% Similarity=0.084 Sum_probs=63.0
Q ss_pred CCCeEEEEcCCCccChHHHHHHHHHHHh-cCCCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCCCCCCCCCch
Q 043859 6 SKPHAVLLASPGVGHVIPVLELGKRLVT-LYNFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDISGLVDPDAA 84 (484)
Q Consensus 6 ~~~~il~~~~p~~GHv~P~l~La~~L~~-r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 84 (484)
+++||+++..+.-+. +.+|.++..+ . +++|..+.+...... .....+..+ +.+..++......
T Consensus 4 ~~~riavl~SG~Gsn---l~all~~~~~~~-~~eI~~Vis~~~~a~-~~~~A~~~g----Ip~~~~~~~~~~~------- 67 (215)
T 3tqr_A 4 EPLPIVVLISGNGTN---LQAIIGAIQKGL-AIEIRAVISNRADAY-GLKRAQQAD----IPTHIIPHEEFPS------- 67 (215)
T ss_dssp CCEEEEEEESSCCHH---HHHHHHHHHTTC-SEEEEEEEESCTTCH-HHHHHHHTT----CCEEECCGGGSSS-------
T ss_pred CCcEEEEEEeCCcHH---HHHHHHHHHcCC-CCEEEEEEeCCcchH-HHHHHHHcC----CCEEEeCccccCc-------
Confidence 467898877665443 4455555543 3 589998887543222 123344555 5555544211110
Q ss_pred HHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCc-hhhHHHHHHHhCCCeEEEeccc
Q 043859 85 VVTIISVIMREIKPAFRSAISALKTTPTALIVDLF-GTESLAIAEELQIPKYVYVGTN 141 (484)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~-~~~~~~~A~~lgIP~v~~~~~~ 141 (484)
. ....+.+.+.++++ +||+||+-.+ ..-...+-......++-++++.
T Consensus 68 -r-------~~~d~~~~~~l~~~--~~Dliv~agy~~il~~~~l~~~~~~~iNiHpSL 115 (215)
T 3tqr_A 68 -R-------TDFESTLQKTIDHY--DPKLIVLAGFMRKLGKAFVSHYSGRMINIHPSL 115 (215)
T ss_dssp -H-------HHHHHHHHHHHHTT--CCSEEEESSCCSCCCHHHHHHTTTSEEEEESSS
T ss_pred -h-------hHhHHHHHHHHHhc--CCCEEEEccchhhCCHHHHhhccCCeEEeCccc
Confidence 0 01124567788888 9999997654 3334456666667788877653
No 118
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=56.62 E-value=80 Score=27.27 Aligned_cols=126 Identities=7% Similarity=0.029 Sum_probs=68.4
Q ss_pred CeEEEEcCCCccChHHHHHHHHH-HHhcCCCeEEEEecCCCchhHHHHHhhhccC-------CCceEEEecCCCCCCCCC
Q 043859 8 PHAVLLASPGVGHVIPVLELGKR-LVTLYNFQVTIFVVASQTSAAESKILQSAMS-------SKLCHVIEIPAPDISGLV 79 (484)
Q Consensus 8 ~~il~~~~p~~GHv~P~l~La~~-L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~p~~~~~~~~ 79 (484)
--+++...|+.|-..=++++|.. +.+. |..|.|++.+...+.+.+.... .+. ...+.+..........
T Consensus 31 ~l~~i~G~pG~GKT~l~l~~~~~~~~~~-~~~v~~~s~E~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~~~~~~-- 106 (251)
T 2zts_A 31 TTVLLTGGTGTGKTTFAAQFIYKGAEEY-GEPGVFVTLEERARDLRREMAS-FGWDFEKYEKEGKIAIVDGVSSVVGL-- 106 (251)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHHHHH-CCCEEEEESSSCHHHHHHHHHT-TTCCHHHHHHTTSEEEEC----------
T ss_pred eEEEEEeCCCCCHHHHHHHHHHHHHHhc-CCCceeecccCCHHHHHHHHHH-cCCChHHHHhcCcchhhhhHHHHhhc--
Confidence 35677777899999999998866 4555 7899999998776655444321 110 0123332221100000
Q ss_pred CCCchHHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCchhh----------------HHHHHHHhCCCeEEEec
Q 043859 80 DPDAAVVTIISVIMREIKPAFRSAISALKTTPTALIVDLFGTE----------------SLAIAEELQIPKYVYVG 139 (484)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~~~~----------------~~~~A~~lgIP~v~~~~ 139 (484)
.........-..........+...++.. ++++||.|..... -...|+++|||++.+..
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~vviD~~~~l~~~~~~~~~~~~~~~~L~~~a~~~~i~vi~~~q 180 (251)
T 2zts_A 107 PSEEKFVLEDRFNVDNFLRYIYRVVKAI--NAKRLVIDSIPSIALRLEEERKIREVLLKLNTILLEMGVTTILTTE 180 (251)
T ss_dssp -----------CCHHHHHHHHHHHHHHT--TCSEEEEECHHHHHHHSSSGGGHHHHHHHHHHHHHHHCCEEEEEEC
T ss_pred ccchhccccccccHHHHHHHHHHHHHhc--CCcEEEEEcHHHHhhhccChHHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 0000000000011122334556667777 9999999965432 12478889999887764
No 119
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=55.47 E-value=44 Score=30.74 Aligned_cols=100 Identities=10% Similarity=0.120 Sum_probs=54.9
Q ss_pred CeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchh------HHHHHhhhccCCCceEEEecCCCCCCCCCCC
Q 043859 8 PHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSA------AESKILQSAMSSKLCHVIEIPAPDISGLVDP 81 (484)
Q Consensus 8 ~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 81 (484)
|||+|+..|.. .....++|.++ ||+|..+.+.+.... -.+...+..+ +.+.... .. .
T Consensus 1 mrivf~gt~~f-----a~~~L~~L~~~-~~~i~~Vvt~~d~~~g~~~~~~v~~~A~~~g----Ipv~~~~-----~~-~- 63 (305)
T 2bln_A 1 MKTVVFAYHDM-----GCLGIEALLAA-GYEISAIFTHTDNPGEKAFYGSVARLAAERG----IPVYAPD-----NV-N- 63 (305)
T ss_dssp CEEEEEECHHH-----HHHHHHHHHHT-TCEEEEEECCCC------CCCCHHHHHHHHT----CCEECCS-----CC-C-
T ss_pred CEEEEEEcCHH-----HHHHHHHHHHC-CCcEEEEEcCCCCCCCCcCccHHHHHHHHcC----CCEECCC-----cC-C-
Confidence 68888865322 24556778888 899988887653321 0122333333 3332211 11 0
Q ss_pred CchHHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCc-hhhHHHHHHHhCCCeEEEeccc
Q 043859 82 DAAVVTIISVIMREIKPAFRSAISALKTTPTALIVDLF-GTESLAIAEELQIPKYVYVGTN 141 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~-~~~~~~~A~~lgIP~v~~~~~~ 141 (484)
.+.+.+.++++ +||++|+=.+ ..-...+-......++.++++.
T Consensus 64 ---------------~~~~~~~l~~~--~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpSL 107 (305)
T 2bln_A 64 ---------------HPLWVERIAQL--SPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSL 107 (305)
T ss_dssp ---------------SHHHHHHHHHT--CCSEEEEESCCSCCCHHHHTTCTTCEEEEESSC
T ss_pred ---------------cHHHHHHHHhc--CCCEEEEeccccccCHHHHhcCcCCEEEecCCc
Confidence 02355677888 9999997543 2333344444455678877653
No 120
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=55.40 E-value=12 Score=30.38 Aligned_cols=40 Identities=10% Similarity=0.108 Sum_probs=27.4
Q ss_pred CCCCCCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCC
Q 043859 1 MESSSSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 1 m~~~~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
|......++|+++-.+..| ..+++.|.++ |++|+++...+
T Consensus 13 ~~~~~~~~~v~IiG~G~iG-----~~la~~L~~~-g~~V~vid~~~ 52 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGCGRLG-----SLIANLASSS-GHSVVVVDKNE 52 (155)
T ss_dssp ----CCCCEEEEECCSHHH-----HHHHHHHHHT-TCEEEEEESCG
T ss_pred hhcccCCCcEEEECCCHHH-----HHHHHHHHhC-CCeEEEEECCH
Confidence 3344567899998654444 5578999999 99999887653
No 121
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=54.51 E-value=32 Score=33.63 Aligned_cols=49 Identities=20% Similarity=0.315 Sum_probs=38.5
Q ss_pred CCCeEEEEcCCCccChHHHHHHHHHHHh-cCCCeEEEEecCCCchhHHHHH
Q 043859 6 SKPHAVLLASPGVGHVIPVLELGKRLVT-LYNFQVTIFVVASQTSAAESKI 55 (484)
Q Consensus 6 ~~~~il~~~~p~~GHv~P~l~La~~L~~-r~Gh~Vt~~~~~~~~~~~~~~~ 55 (484)
+.--+++...|+.|-..=++.+|..+.. . |..|.|++.+.....+...+
T Consensus 202 ~G~liiI~G~pG~GKTtl~l~ia~~~~~~~-g~~Vl~~s~E~s~~~l~~r~ 251 (454)
T 2r6a_A 202 RSDLIIVAARPSVGKTAFALNIAQNVATKT-NENVAIFSLEMSAQQLVMRM 251 (454)
T ss_dssp TTCEEEEECCTTSCHHHHHHHHHHHHHHHS-SCCEEEEESSSCHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHhC-CCcEEEEECCCCHHHHHHHH
Confidence 3345777788899999999999999875 5 78999999987665555443
No 122
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=54.46 E-value=17 Score=28.81 Aligned_cols=40 Identities=5% Similarity=0.248 Sum_probs=30.0
Q ss_pred CeEEEEcC-C--CccChHHHHHHHHHHHhcCCCeEEEEecCCCc
Q 043859 8 PHAVLLAS-P--GVGHVIPVLELGKRLVTLYNFQVTIFVVASQT 48 (484)
Q Consensus 8 ~~il~~~~-p--~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~ 48 (484)
+|++|+.. + +.......+.+|....+. ||+|+++-+..-.
T Consensus 16 ~kl~ii~~sgP~~~~~~~~al~lA~~A~a~-g~eV~vFf~~dGV 58 (134)
T 3mc3_A 16 XXILIVVTHGPEDLDRTYAPLFMASISASM-EYETSVFFMIXGP 58 (134)
T ss_dssp CEEEEEECCCGGGTHHHHHHHHHHHHHHHT-TCEEEEEECTTGG
T ss_pred ceEEEEEccCCCCHHHHHHHHHHHHHHHHC-CCCEEEEEEeCcH
Confidence 45554444 3 466788889999999998 9999998888543
No 123
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=54.00 E-value=1.1e+02 Score=27.11 Aligned_cols=39 Identities=10% Similarity=0.064 Sum_probs=29.3
Q ss_pred HHHHHHHhcCCCCeEEEeCCchh------hHHHHHHHhCCCeEEEec
Q 043859 99 AFRSAISALKTTPTALIVDLFGT------ESLAIAEELQIPKYVYVG 139 (484)
Q Consensus 99 ~l~~~l~~~~~~pD~VI~D~~~~------~~~~~A~~lgIP~v~~~~ 139 (484)
.+..++++. .||+||+-.... .+..+|.+||+|.++..+
T Consensus 104 ~La~~i~~~--~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 148 (252)
T 1efp_B 104 ILAAVARAE--GTELIIAGKQAIDNDMNATGQMLAAILGWAQATFAS 148 (252)
T ss_dssp HHHHHHHHH--TCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHhc--CCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEE
Confidence 445556666 899999875443 467899999999998654
No 124
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=53.85 E-value=19 Score=31.61 Aligned_cols=42 Identities=24% Similarity=0.336 Sum_probs=37.7
Q ss_pred CCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCC
Q 043859 5 SSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQ 47 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~ 47 (484)
..+++|++..-|+.|-..-++.+|..|.++ |++|.++..++.
T Consensus 4 ~g~l~I~~~~kgGvGKTt~a~~la~~l~~~-G~~V~v~d~D~q 45 (228)
T 2r8r_A 4 RGRLKVFLGAAPGVGKTYAMLQAAHAQLRQ-GVRVMAGVVETH 45 (228)
T ss_dssp CCCEEEEEESSTTSSHHHHHHHHHHHHHHT-TCCEEEEECCCT
T ss_pred CceEEEEEECCCCCcHHHHHHHHHHHHHHC-CCCEEEEEeCCC
Confidence 457899999999999999999999999999 999998888753
No 125
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=53.60 E-value=13 Score=32.03 Aligned_cols=42 Identities=10% Similarity=-0.050 Sum_probs=32.5
Q ss_pred CCCCeEEEEcCCCccChHH-HHHHHHHHHhcCCCeEEEEecCCCc
Q 043859 5 SSKPHAVLLASPGVGHVIP-VLELGKRLVTLYNFQVTIFVVASQT 48 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P-~l~La~~L~~r~Gh~Vt~~~~~~~~ 48 (484)
.+.+||++.-.++ +..+- ...+.+.|+++ |++|.++.++.-.
T Consensus 3 l~~k~IllgiTGs-iaayk~~~~ll~~L~~~-g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 3 LKGKRIGFGFTGS-HCTYEEVMPHLEKLIAE-GAEVRPVVSYTVQ 45 (207)
T ss_dssp CTTCEEEEEECSC-GGGGTTSHHHHHHHHHT-TCEEEEEECC---
T ss_pred CCCCEEEEEEECh-HHHHHHHHHHHHHHHhC-CCEEEEEEehHHH
Confidence 3457888887777 45665 89999999999 9999999998643
No 126
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=53.45 E-value=90 Score=29.07 Aligned_cols=101 Identities=10% Similarity=0.106 Sum_probs=58.0
Q ss_pred CCeEEEEcCCCcc--C--hHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCCCCCCCCC
Q 043859 7 KPHAVLLASPGVG--H--VIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDISGLVDPD 82 (484)
Q Consensus 7 ~~~il~~~~p~~G--H--v~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 82 (484)
+.-|+|.|..+.. . ..-+..|++.|.++ |++|.+++.+...+. .+.+.+..+ -....+. + .
T Consensus 185 ~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~-g~~vvl~g~~~e~~~-~~~i~~~~~----~~~~~l~-----g----~ 249 (349)
T 3tov_A 185 DILIGFNIGSAVPEKRWPAERFAHVADYFGRL-GYKTVFFGGPMDLEM-VQPVVEQME----TKPIVAT-----G----K 249 (349)
T ss_dssp CCEEEEECCCSSGGGCCCHHHHHHHHHHHHHH-TCEEEECCCTTTHHH-HHHHHHTCS----SCCEECT-----T----C
T ss_pred CCEEEEeCCCCCccCCCCHHHHHHHHHHHHhC-CCeEEEEeCcchHHH-HHHHHHhcc----cccEEee-----C----C
Confidence 3456666655433 2 34689999999999 999998776643322 223333322 1111111 0 0
Q ss_pred chHHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCchhhHHHHHHHhCCCeEEEecc
Q 043859 83 AAVVTIISVIMREIKPAFRSAISALKTTPTALIVDLFGTESLAIAEELQIPKYVYVGT 140 (484)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~~~~~~~~A~~lgIP~v~~~~~ 140 (484)
.+ ..++..+++ +-|++|+- ..+...+|..+|+|+|.++..
T Consensus 250 ~s------------l~e~~ali~----~a~~~i~~--DsG~~HlAaa~g~P~v~lfg~ 289 (349)
T 3tov_A 250 FQ------------LGPLAAAMN----RCNLLITN--DSGPMHVGISQGVPIVALYGP 289 (349)
T ss_dssp CC------------HHHHHHHHH----TCSEEEEE--SSHHHHHHHTTTCCEEEECSS
T ss_pred CC------------HHHHHHHHH----hCCEEEEC--CCCHHHHHHhcCCCEEEEECC
Confidence 01 123445555 55888864 244556788899999998753
No 127
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=53.36 E-value=1.6e+02 Score=29.27 Aligned_cols=97 Identities=16% Similarity=0.109 Sum_probs=56.2
Q ss_pred CCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHH---hhhccCCCceEEEecCCCCCCCCCCCCc
Q 043859 7 KPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKI---LQSAMSSKLCHVIEIPAPDISGLVDPDA 83 (484)
Q Consensus 7 ~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 83 (484)
.+||+++. .-.-.++|++.|.+- |.+|+.+.+........+.+ ++..+.+....+. .+.
T Consensus 364 GKrvaI~g-----d~~~~~~la~fL~el-Gm~vv~v~~~~~~~~~~~~~~~~l~~~~~~~~~~v~------------~~~ 425 (523)
T 3u7q_B 364 GKRFALWG-----DPDFVMGLVKFLLEL-GCEPVHILCHNGNKRWKKAVDAILAASPYGKNATVY------------IGK 425 (523)
T ss_dssp TCEEEEEC-----SHHHHHHHHHHHHHT-TCEEEEEEETTCCHHHHHHHHHHHHTSGGGTTCEEE------------ESC
T ss_pred CCEEEEEC-----CchHHHHHHHHHHHc-CCEEEEEEeCCCCHHHHHHHHHHHhhccCCCCcEEE------------ECC
Confidence 46788772 334457888888887 99999888765443332222 2222210011110 000
Q ss_pred hHHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCchhhHHHHHHHh-------CCCeEEEe
Q 043859 84 AVVTIISVIMREIKPAFRSAISALKTTPTALIVDLFGTESLAIAEEL-------QIPKYVYV 138 (484)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~~~~~~~~A~~l-------gIP~v~~~ 138 (484)
+ ...+++.+++. +||+||..... ..+|+++ |||++.+.
T Consensus 426 D------------~~~l~~~i~~~--~pDLlig~s~~---k~~a~~~~~~~~~~giP~irig 470 (523)
T 3u7q_B 426 D------------LWHLRSLVFTD--KPDFMIGNSYG---KFIQRDTLHKGKEFEVPLIRIG 470 (523)
T ss_dssp C------------HHHHHHHHHHT--CCSEEEECTTH---HHHHHHHHHHCGGGCCCEEECS
T ss_pred C------------HHHHHHHHHhc--CCCEEEECccH---HHHHHHhhcccccCCCceEEec
Confidence 1 12455667778 99999999543 3466666 99988753
No 128
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=52.79 E-value=12 Score=35.84 Aligned_cols=36 Identities=14% Similarity=0.122 Sum_probs=31.4
Q ss_pred CeEEEEcC-CCccChHHHHHHHHHHHhcCCCeEEEEec
Q 043859 8 PHAVLLAS-PGVGHVIPVLELGKRLVTLYNFQVTIFVV 44 (484)
Q Consensus 8 ~~il~~~~-p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~ 44 (484)
|+|++++. ++.|-..-...||..|+++ |++|.++..
T Consensus 2 ~~i~~~~gkGG~GKTt~a~~la~~la~~-g~~vllvd~ 38 (374)
T 3igf_A 2 ALILTFLGKSGVARTKIAIAAAKLLASQ-GKRVLLAGL 38 (374)
T ss_dssp CEEEEEECSBHHHHHHHHHHHHHHHHHT-TCCEEEEEC
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHHC-CCCeEEEeC
Confidence 46766665 6899999999999999999 999999998
No 129
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=52.39 E-value=89 Score=27.56 Aligned_cols=38 Identities=0% Similarity=-0.058 Sum_probs=27.1
Q ss_pred CCeEEEEcCCCccChH-HHHHHHHHHHhcCCCeEEEEecC
Q 043859 7 KPHAVLLASPGVGHVI-PVLELGKRLVTLYNFQVTIFVVA 45 (484)
Q Consensus 7 ~~~il~~~~p~~GHv~-P~l~La~~L~~r~Gh~Vt~~~~~ 45 (484)
.|||+++..-+.-++. .+...++.+... |.+|++++.+
T Consensus 1 ~mrilvINPnts~~~T~~i~~~~~~~~~p-~~~i~~~t~~ 39 (245)
T 3qvl_A 1 SVRIQVINPNTSLAMTETIGAAARAVAAP-GTEILAVCPR 39 (245)
T ss_dssp CEEEEEECSSCCHHHHHHHHHHHHHHCCT-TEEEEEECCS
T ss_pred CCEEEEEeCCCCHHHHHHHHHHHHHhcCC-CCEEEEEeCC
Confidence 3788888887776664 555677777665 7888877755
No 130
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=51.65 E-value=1.2e+02 Score=26.13 Aligned_cols=109 Identities=11% Similarity=-0.029 Sum_probs=63.9
Q ss_pred CeEEEEcCCCccChHHHHHHHHHHHhcC-CCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCCCCCCCCCchHH
Q 043859 8 PHAVLLASPGVGHVIPVLELGKRLVTLY-NFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDISGLVDPDAAVV 86 (484)
Q Consensus 8 ~~il~~~~p~~GHv~P~l~La~~L~~r~-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 86 (484)
|||+++..+..+ -+.+|.+++.+.. +|+|..+.+...... .....+..+ +.+..++...+. .
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~-~~~~A~~~g----Ip~~~~~~~~~~-----~---- 63 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAF-GLERARQAG----IATHTLIASAFD-----S---- 63 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCH-HHHHHHHTT----CEEEECCGGGCS-----S----
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchH-HHHHHHHcC----CcEEEeCccccc-----c----
Confidence 477776665443 4777788877642 488887777643332 233345555 655554321111 0
Q ss_pred HHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCc-hhhHHHHHHHhCCCeEEEeccc
Q 043859 87 TIISVIMREIKPAFRSAISALKTTPTALIVDLF-GTESLAIAEELQIPKYVYVGTN 141 (484)
Q Consensus 87 ~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~-~~~~~~~A~~lgIP~v~~~~~~ 141 (484)
.....+.+.+.++++ +||+||+-.+ ..-...+-......++-++++.
T Consensus 64 ------r~~~~~~~~~~l~~~--~~Dliv~agy~~il~~~~l~~~~~~~iNiHpSl 111 (212)
T 1jkx_A 64 ------REAYDRELIHEIDMY--APDVVVLAGFMRILSPAFVSHYAGRLLNIHPSL 111 (212)
T ss_dssp ------HHHHHHHHHHHHGGG--CCSEEEESSCCSCCCHHHHHHTTTSEEEEESSC
T ss_pred ------hhhccHHHHHHHHhc--CCCEEEEeChhhhCCHHHHhhccCCEEEEccCc
Confidence 011224566778888 9999997654 3334455666777788887653
No 131
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=51.37 E-value=80 Score=31.22 Aligned_cols=48 Identities=8% Similarity=0.049 Sum_probs=37.9
Q ss_pred CeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHH
Q 043859 8 PHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKI 55 (484)
Q Consensus 8 ~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~ 55 (484)
-=+++...|+.|-..=++++|..+..+.|..|.|++.+...+.+...+
T Consensus 243 ~l~li~G~pG~GKT~lal~~a~~~a~~~g~~vl~~s~E~s~~~l~~r~ 290 (503)
T 1q57_A 243 EVIMVTSGSGMVMSTFVRQQALQWGTAMGKKVGLAMLEESVEETAEDL 290 (503)
T ss_dssp CEEEEEESSCHHHHHHHHHHHHHHTTTSCCCEEEEESSSCHHHHHHHH
T ss_pred eEEEEeecCCCCchHHHHHHHHHHHHhcCCcEEEEeccCCHHHHHHHH
Confidence 346777788999999999999999763278999999997766555443
No 132
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=50.69 E-value=1.3e+02 Score=27.77 Aligned_cols=102 Identities=13% Similarity=0.120 Sum_probs=58.9
Q ss_pred CCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchh---------HHHHHhhhccCCCceEEEecCCCCCC
Q 043859 6 SKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSA---------AESKILQSAMSSKLCHVIEIPAPDIS 76 (484)
Q Consensus 6 ~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~p~~~~~ 76 (484)
+-|||+|+-.|..+ +..-++|.++ ||+|..+.+.+.+.. -.+...+..+ +.+... .
T Consensus 3 ~mmrIvf~Gtp~fa-----~~~L~~L~~~-~~~v~~Vvt~pd~~~gRg~~l~~~pv~~~A~~~g----Ipv~~~-----~ 67 (317)
T 3rfo_A 3 AMIKVVFMGTPDFS-----VPVLRRLIED-GYDVIGVVTQPDRPVGRKKVLTPTPVKVEAEKHG----IPVLQP-----L 67 (317)
T ss_dssp TTSEEEEECCSTTH-----HHHHHHHHHT-TCEEEEEECCCCCEETTTTEECCCHHHHHHHHTT----CCEECC-----S
T ss_pred CceEEEEEeCCHHH-----HHHHHHHHHC-CCcEEEEEeCCCcccCCCcccCCCHHHHHHHHcC----CCEEcc-----c
Confidence 45899999888654 3445778888 899998887654321 1122333333 333211 1
Q ss_pred CCCCCCchHHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCc-hhhHHHHHHHhCCCeEEEeccc
Q 043859 77 GLVDPDAAVVTIISVIMREIKPAFRSAISALKTTPTALIVDLF-GTESLAIAEELQIPKYVYVGTN 141 (484)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~-~~~~~~~A~~lgIP~v~~~~~~ 141 (484)
.. . . +...+.++++ +||++|+-.+ ..-...+-......++.++++.
T Consensus 68 ~~-~-~---------------~~~~~~l~~~--~~Dliv~~~y~~ilp~~~l~~~~~g~iNiHpSl 114 (317)
T 3rfo_A 68 RI-R-E---------------KDEYEKVLAL--EPDLIVTAAFGQIVPNEILEAPKYGCINVHASL 114 (317)
T ss_dssp CT-T-S---------------HHHHHHHHHH--CCSEEEESSCCSCCCHHHHHSSTTCEEEEESSC
T ss_pred cC-C-C---------------HHHHHHHHhc--CCCEEEEcCchhhCCHHHHhhCcCCEEEECCcc
Confidence 11 0 0 1224567778 9999997754 2333344455566678877654
No 133
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=50.45 E-value=29 Score=29.08 Aligned_cols=45 Identities=13% Similarity=0.077 Sum_probs=31.0
Q ss_pred EecCCcchh-hhccCCCccccccccCchhHHH---HHhcCCceeecccc
Q 043859 347 VVPQWAPQI-DILSHPSVGGFLSHCGWNSTLE---SITNGVPMIVWPLY 391 (484)
Q Consensus 347 ~v~~~ipq~-~vL~~~~~~~~ItHgG~gs~~e---al~~GvP~v~~P~~ 391 (484)
.+..+.++. .++...+...++--||.||..| ++.+++|++++|.+
T Consensus 92 i~~~~~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~ 140 (176)
T 2iz6_A 92 IVTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQ 140 (176)
T ss_dssp EECCCCSSSCCCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCC
T ss_pred EEcCCHHHHHHHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCc
Confidence 344666653 4444444447778899998665 46799999999984
No 134
>3r8n_B 30S ribosomal protein S2; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_B 3fih_B* 3j18_B* 2wwl_B 3oar_B 3oaq_B 3ofb_B 3ofa_B 3ofp_B 3ofx_B 3ofy_B 3ofo_B 3r8o_B 4a2i_B 4gd1_B 4gd2_B 3i1m_B 1vs7_B* 3e1a_B 3e1c_B ...
Probab=50.39 E-value=25 Score=30.52 Aligned_cols=43 Identities=12% Similarity=-0.038 Sum_probs=27.9
Q ss_pred CccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhhcc
Q 043859 17 GVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSAM 60 (484)
Q Consensus 17 ~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~ 60 (484)
+.-++.-...+...++++ |-+|.|+++......+........+
T Consensus 38 T~~~L~~A~~~i~~~~~~-~~~iLfVgTk~~~~~~V~~~A~~~g 80 (218)
T 3r8n_B 38 TVPMFNEALAELNKIASR-KGKILFVGTKRAASEAVKDAALSCD 80 (218)
T ss_dssp SGGGTTTHHHHHHHHHHT-TCCCCEECCCTTTTTTTTTHHHHSS
T ss_pred HHHHHHHHHHHHHHHHhC-CCEEEEEeCChHHHHHHHHHHHHcC
Confidence 344555566777788888 8999999998765443333333333
No 135
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=50.30 E-value=22 Score=35.97 Aligned_cols=52 Identities=15% Similarity=0.075 Sum_probs=43.6
Q ss_pred CCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhh
Q 043859 6 SKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQS 58 (484)
Q Consensus 6 ~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~ 58 (484)
++.+|++.+.++..|-....-++..|..+ |++|++++.....+.+.....+.
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~~-G~eVi~LG~~vP~e~iv~aa~~~ 148 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQCN-NYEIVDLGVMVPAEKILRTAKEV 148 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHTT-TCEEEECCSSBCHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHHC-CCEEEECCCCCCHHHHHHHHHHc
Confidence 46799999999999999999999999999 99999998886666555554433
No 136
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=50.15 E-value=1.1e+02 Score=28.86 Aligned_cols=41 Identities=5% Similarity=-0.027 Sum_probs=34.0
Q ss_pred eEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchh
Q 043859 9 HAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSA 50 (484)
Q Consensus 9 ~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~ 50 (484)
-++|+-.|+.|=..=++.++..+... |..|.|+..+.....
T Consensus 63 i~~I~GppGsGKSTLal~la~~~~~~-gg~VlyId~E~s~~~ 103 (356)
T 3hr8_A 63 IVEIFGQESSGKTTLALHAIAEAQKM-GGVAAFIDAEHALDP 103 (356)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHT-TCCEEEEESSCCCCH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHhc-CCeEEEEecccccch
Confidence 35666678999999999999999988 899999999876543
No 137
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=49.77 E-value=42 Score=31.46 Aligned_cols=38 Identities=18% Similarity=0.281 Sum_probs=32.9
Q ss_pred CeEEEEcC-CCccChHHHHHHHHHHHhcCCCeEEEEecCC
Q 043859 8 PHAVLLAS-PGVGHVIPVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 8 ~~il~~~~-p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
++|+|++. ++-|-..-..+||..|+++ |++|.++..+.
T Consensus 26 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~-G~rVLlvD~D~ 64 (349)
T 3ug7_A 26 TKYIMFGGKGGVGKTTMSAATGVYLAEK-GLKVVIVSTDP 64 (349)
T ss_dssp CEEEEEECSSSTTHHHHHHHHHHHHHHS-SCCEEEEECCT
T ss_pred CEEEEEeCCCCccHHHHHHHHHHHHHHC-CCeEEEEeCCC
Confidence 45555554 7999999999999999999 99999999987
No 138
>2dr3_A UPF0273 protein PH0284; RECA superfamily ATPase, hexamer, structural genomics; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=48.77 E-value=1.3e+02 Score=25.81 Aligned_cols=121 Identities=12% Similarity=0.096 Sum_probs=70.1
Q ss_pred CCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhhccCC-------CceEEEecCCCCCC---
Q 043859 7 KPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSAMSS-------KLCHVIEIPAPDIS--- 76 (484)
Q Consensus 7 ~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~p~~~~~--- 76 (484)
.--+++...++.|-..=++.++..+... |..|.|++.+.....+.+.. ...+.. .++.+.........
T Consensus 23 G~~~~i~G~~GsGKTtl~~~~~~~~~~~-~~~v~~~~~e~~~~~~~~~~-~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~ 100 (247)
T 2dr3_A 23 RNVVLLSGGPGTGKTIFSQQFLWNGLKM-GEPGIYVALEEHPVQVRQNM-AQFGWDVKPYEEKGMFAMVDAFTAGIGKSK 100 (247)
T ss_dssp TCEEEEEECTTSSHHHHHHHHHHHHHHT-TCCEEEEESSSCHHHHHHHH-HTTTCCCHHHHHHTSEEEEECSTTTTCC--
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHHHhc-CCeEEEEEccCCHHHHHHHH-HHcCCCHHHHhhCCcEEEEecchhhccccc
Confidence 3356777778999999999999999888 89999999987655443332 222211 13444442111110
Q ss_pred --CCC--CCCchHHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCchhhH--------------HHHHHHhCCCeEEEe
Q 043859 77 --GLV--DPDAAVVTIISVIMREIKPAFRSAISALKTTPTALIVDLFGTES--------------LAIAEELQIPKYVYV 138 (484)
Q Consensus 77 --~~~--~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~~~~~--------------~~~A~~lgIP~v~~~ 138 (484)
..+ ....+ .......+.+.+++. ++++||.|...... ...+++.|++++.+.
T Consensus 101 ~~~~~~~~~~~~--------~~~~~~~i~~~~~~~--~~~~vviD~~~~l~~~~~~~~~~~l~~l~~~~~~~~~~vi~~~ 170 (247)
T 2dr3_A 101 EYEKYIVHDLTD--------IREFIEVLRQAIRDI--NAKRVVVDSVTTLYINKPAMARSIILQLKRVLAGTGCTSIFVS 170 (247)
T ss_dssp CCCSCBCSCCSS--------HHHHHHHHHHHHHHH--TCCEEEEETSGGGTTTCGGGHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccccccccCccC--------HHHHHHHHHHHHHHh--CCCEEEECCchHhhcCCHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence 000 00011 112234556666677 89999999765431 114456788877654
Q ss_pred c
Q 043859 139 G 139 (484)
Q Consensus 139 ~ 139 (484)
.
T Consensus 171 h 171 (247)
T 2dr3_A 171 Q 171 (247)
T ss_dssp E
T ss_pred c
Confidence 3
No 139
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=48.63 E-value=18 Score=32.38 Aligned_cols=43 Identities=19% Similarity=0.244 Sum_probs=36.8
Q ss_pred CCCCeEEEEcCC---CccChHHHHHHHHHHHhcCCCeEEEEecCCCc
Q 043859 5 SSKPHAVLLASP---GVGHVIPVLELGKRLVTLYNFQVTIFVVASQT 48 (484)
Q Consensus 5 ~~~~~il~~~~p---~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~ 48 (484)
|.+||.+|++.+ +.|-=.-.-+|++.|.+| |++||..=-+++.
T Consensus 20 ~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~-G~~Vt~~K~DPYl 65 (295)
T 2vo1_A 20 FQSMKYILVTGGVISGIGKGIIASSVGTILKSC-GLHVTSIKIDPYI 65 (295)
T ss_dssp -CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHT-TCCEEEEEEECSS
T ss_pred cccceEEEEcCCcccccccHHHHHHHHHHHHHC-CCcceeeecccce
Confidence 678999999986 677778899999999999 9999998877654
No 140
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=48.55 E-value=51 Score=28.56 Aligned_cols=111 Identities=13% Similarity=0.073 Sum_probs=59.3
Q ss_pred eEEEEcCCCccChH----HHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCCCCCCCCCch
Q 043859 9 HAVLLASPGVGHVI----PVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDISGLVDPDAA 84 (484)
Q Consensus 9 ~il~~~~p~~GHv~----P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 84 (484)
.|+++.---.|.++ -++..|++|++..|-+|+.++-....+.+.+... ..+.. +.+-+....+... .
T Consensus 5 ~ilV~~E~~~g~l~~~s~ell~~A~~La~~~g~~v~av~~G~~~~~~~~~~~-~~Gad---~v~~v~~~~~~~~---~-- 75 (217)
T 3ih5_A 5 NLFVYCEIEEGIVADVSLELLTKGRSLANELNCQLEAVVAGTGLKEIEKQIL-PYGVD---KLHVFDAEGLYPY---T-- 75 (217)
T ss_dssp CEEEECCEETTEECHHHHHHHHHHHHHHHHHTCCEEEEEEESCCTTTHHHHG-GGTCS---EEEEEECGGGSSC---C--
T ss_pred cEEEEEECcCCEECHHHHHHHHHHHHHHHhcCCeEEEEEECCCHHHHHHHHH-hcCCC---EEEEecCcccccC---C--
Confidence 35665554455544 4578888887532667776654432222223332 23421 2222222111111 0
Q ss_pred HHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCchhh---HHHHHHHhCCCeEEEe
Q 043859 85 VVTIISVIMREIKPAFRSAISALKTTPTALIVDLFGTE---SLAIAEELQIPKYVYV 138 (484)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~~~~---~~~~A~~lgIP~v~~~ 138 (484)
.......+.+++++. +||+|++-....+ +..+|.+|++|.+.-.
T Consensus 76 --------~~~~a~~l~~~i~~~--~p~~Vl~g~t~~G~~laprlAa~L~~~~~sdv 122 (217)
T 3ih5_A 76 --------SLPHTSILVNLFKEE--QPQICLMGATVIGRDLGPRVSSALTSGLTADC 122 (217)
T ss_dssp --------HHHHHHHHHHHHHHH--CCSEEEEECSHHHHHHHHHHHHHTTCCCBCSC
T ss_pred --------HHHHHHHHHHHHHhc--CCCEEEEeCCcchhhHHHHHHHHhCCCccceE
Confidence 111234556677778 9999998865543 2358999999987643
No 141
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=47.42 E-value=19 Score=30.81 Aligned_cols=42 Identities=10% Similarity=0.095 Sum_probs=33.8
Q ss_pred CeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchh
Q 043859 8 PHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSA 50 (484)
Q Consensus 8 ~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~ 50 (484)
|||++...++.|-+. ...|.+.|+++.|++|+++.++.-...
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~f 42 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTT 42 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHH
Confidence 688888888887766 899999998753699999999864433
No 142
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=47.20 E-value=1.2e+02 Score=25.16 Aligned_cols=144 Identities=13% Similarity=0.135 Sum_probs=74.5
Q ss_pred CeEEEEecCCCCCCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCCCCCCcccCCCCCCCCCccCCCchhHHHhhcCCceEe
Q 043859 269 ESVLYVSFGSGGTLTYEQITELAWGLELSQQRFIWVVRLPNETTGDGSFFTAGSGAGDDDLSSLLPDGFLSRTLDIGVVV 348 (484)
Q Consensus 269 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v 348 (484)
+|.|-|-+||.. +....+++.+.|+..+..+-..+.. ....|+.+.+
T Consensus 22 kp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~S----------------------AHRtp~~l~~--------- 68 (181)
T 4b4k_A 22 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVS----------------------AHRTPDYMFE--------- 68 (181)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC----------------------TTTSHHHHHH---------
T ss_pred CccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEc----------------------cccChHHHHH---------
Confidence 456777788744 5567888899999988876555522 2444553322
Q ss_pred cCCcchhhhccCCCccccccccCch----hHHHHHhcCCceeeccccccc---chhHHHHHhhhcceEEeeecCCC--Cc
Q 043859 349 PQWAPQIDILSHPSVGGFLSHCGWN----STLESITNGVPMIVWPLYSEQ---RMNATILTEELGVAIRSKVLPSK--GV 419 (484)
Q Consensus 349 ~~~ipq~~vL~~~~~~~~ItHgG~g----s~~eal~~GvP~v~~P~~~DQ---~~na~rv~~~~G~g~~l~~~~~~--~~ 419 (484)
|+...+ ...++++|.=.|.- ++.-+ ..-+|+|.+|..... .+.-.-++ +.=-|+.+-+.+.. ..
T Consensus 69 --~~~~a~---~~g~~ViIa~AG~aahLpGvvAa-~T~~PVIGVPv~s~~l~G~DsLlSiv-QMP~GvpVaTvaig~~ga 141 (181)
T 4b4k_A 69 --YAETAR---ERGLKVIIAGAGGAAHLPGMVAA-KTNLPVIGVPVQSKALNGLDSLLSIV-QMPGGVPVATVAIGKAGS 141 (181)
T ss_dssp --HHHHTT---TTTCCEEEEEECSSCCHHHHHHT-TCCSCEEEEECCCTTTTTHHHHHHHH-TCCTTCCCEECCSSHHHH
T ss_pred --HHHHHH---hcCceEEEEeccccccchhhHHh-cCCCCEEEEecCCCCccchhhHHHHH-hCCCCCceEEEecCCccH
Confidence 111111 11122466555533 34433 346899999986532 22222333 55445555432221 01
Q ss_pred cCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhh
Q 043859 420 VGREEIKTMVRRILVDEEGYEIRAKVKELQRSAQKAW 456 (484)
Q Consensus 420 ~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~ 456 (484)
.++.-++..|.. +.|++ .+++.+.+++..++.+
T Consensus 142 ~NAallA~qILa-~~d~~---l~~kl~~~r~~~~~~v 174 (181)
T 4b4k_A 142 TNAGLLAAQILG-SFHDD---IHDALELRREAIEKDV 174 (181)
T ss_dssp HHHHHHHHHHHT-TTCHH---HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc-cCCHH---HHHHHHHHHHHHHHHH
Confidence 222333333211 23454 8888888877766544
No 143
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=47.20 E-value=18 Score=28.87 Aligned_cols=44 Identities=14% Similarity=0.073 Sum_probs=27.1
Q ss_pred CCCCCCCCeEEEEcCCCccC--hHHHHHHHHHHHhcCCCeEEEEecCC
Q 043859 1 MESSSSKPHAVLLASPGVGH--VIPVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 1 m~~~~~~~~il~~~~p~~GH--v~P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
|+..|++.-|++ .-+-+|+ ..-.+.+|..+.+. ||+|.++-...
T Consensus 1 ~~~~Mkk~~ivv-~~~P~g~~~~~~al~~a~a~~a~-~~~v~Vff~~D 46 (136)
T 2hy5_B 1 MSEVVKKFMYLN-RKAPYGTIYAWEALEVVLIGAAF-DQDVCVLFLDD 46 (136)
T ss_dssp ----CCEEEEEE-CSCTTTSSHHHHHHHHHHHHGGG-CCEEEEEECGG
T ss_pred CccchhEEEEEE-eCCCCCcHHHHHHHHHHHHHHhC-CCCEEEEEEhH
Confidence 555565444444 3344454 44457789999998 89999988774
No 144
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=47.18 E-value=1.6e+02 Score=26.32 Aligned_cols=34 Identities=18% Similarity=0.164 Sum_probs=25.2
Q ss_pred CeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCC
Q 043859 8 PHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 8 ~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
|||++. ++.|.+- -.|+++|.++ ||+|+.++-.+
T Consensus 1 MkILVT--GatGfIG--~~L~~~L~~~-G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MRVLVG--GGTGFIG--TALTQLLNAR-GHEVTLVSRKP 34 (298)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHT-TCEEEEEESSC
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHC-CCEEEEEECCC
Confidence 787765 4455554 4588999999 99999988543
No 145
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=46.94 E-value=17 Score=31.44 Aligned_cols=42 Identities=14% Similarity=0.181 Sum_probs=32.7
Q ss_pred CCCCeEEEEcCCCccChHHHHHHHHHHHh-cCCCeEEEEecCCCc
Q 043859 5 SSKPHAVLLASPGVGHVIPVLELGKRLVT-LYNFQVTIFVVASQT 48 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P~l~La~~L~~-r~Gh~Vt~~~~~~~~ 48 (484)
.+++||++...++.+=+. ...|.+.|++ + |++|.++.++...
T Consensus 17 l~~k~IllgvTGsiaa~k-~~~lv~~L~~~~-g~~V~vv~T~~A~ 59 (206)
T 1qzu_A 17 ERKFHVLVGVTGSVAALK-LPLLVSKLLDIP-GLEVAVVTTERAK 59 (206)
T ss_dssp CSSEEEEEEECSSGGGGT-HHHHHHHHC----CEEEEEEECTGGG
T ss_pred cCCCEEEEEEeChHHHHH-HHHHHHHHhccc-CCEEEEEECHhHH
Confidence 456788888888877554 6999999998 8 9999999999644
No 146
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=45.92 E-value=1.3e+02 Score=26.45 Aligned_cols=20 Identities=10% Similarity=0.147 Sum_probs=16.0
Q ss_pred hhHHHHHHHHhcCCCCeEEEeC
Q 043859 96 IKPAFRSAISALKTTPTALIVD 117 (484)
Q Consensus 96 ~~~~l~~~l~~~~~~pD~VI~D 117 (484)
....+.++++++ +||+|++-
T Consensus 85 ~~~~l~~~ir~~--~PdvV~t~ 104 (242)
T 2ixd_A 85 YIREIVKVIRTY--KPKLVFAP 104 (242)
T ss_dssp HHHHHHHHHHHH--CCSEEEEE
T ss_pred HHHHHHHHHHHc--CCCEEEEC
Confidence 456777888999 99999963
No 147
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=44.17 E-value=31 Score=31.31 Aligned_cols=38 Identities=13% Similarity=0.058 Sum_probs=25.0
Q ss_pred CCCCeEEEEcC-CCccChHHHH--HHHHHHHhcCCCeEEEEe
Q 043859 5 SSKPHAVLLAS-PGVGHVIPVL--ELGKRLVTLYNFQVTIFV 43 (484)
Q Consensus 5 ~~~~~il~~~~-p~~GHv~P~l--~La~~L~~r~Gh~Vt~~~ 43 (484)
|++||||++.. |-..-++-.+ .+.+.|.+. ||+|+++-
T Consensus 20 m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~-G~eV~v~D 60 (280)
T 4gi5_A 20 FQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQA-GHEVQVSD 60 (280)
T ss_dssp --CCEEEEEECCSCTTSHHHHHHHHHHHHHHHT-TCEEEEEE
T ss_pred hhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHC-CCeEEEEE
Confidence 77899988754 5444444433 466778888 99999874
No 148
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=43.88 E-value=1.4e+02 Score=24.89 Aligned_cols=141 Identities=16% Similarity=0.199 Sum_probs=77.2
Q ss_pred eEEEEecCCCCCCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCCCCCCcccCCCCCCCCCccCCCchhHHHhhcCCceEec
Q 043859 270 SVLYVSFGSGGTLTYEQITELAWGLELSQQRFIWVVRLPNETTGDGSFFTAGSGAGDDDLSSLLPDGFLSRTLDIGVVVP 349 (484)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~ 349 (484)
|.|-|-+||.. +....+++...|+..|..+=..+.. ....|+.+.+
T Consensus 14 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~S----------------------aHR~p~~l~~---------- 59 (183)
T 1o4v_A 14 PRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVS----------------------AHRTPDRMFE---------- 59 (183)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECC----------------------TTTCHHHHHH----------
T ss_pred CeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEc----------------------ccCCHHHHHH----------
Confidence 46666677643 5567888888888888886555421 2445553322
Q ss_pred CCcchhhhccCCCccccccccCc----hhHHHHHhcCCceeecccccc--cchhHHH-HHhhh--cceEEeeecCCCCcc
Q 043859 350 QWAPQIDILSHPSVGGFLSHCGW----NSTLESITNGVPMIVWPLYSE--QRMNATI-LTEEL--GVAIRSKVLPSKGVV 420 (484)
Q Consensus 350 ~~ipq~~vL~~~~~~~~ItHgG~----gs~~eal~~GvP~v~~P~~~D--Q~~na~r-v~~~~--G~g~~l~~~~~~~~~ 420 (484)
|+.+.+- ...+ ++|.=+|. .++.-++ .-+|+|.+|.... ....+.. +. +. |+.+. +...+...
T Consensus 60 -~~~~a~~-~g~~--ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSiv-qmP~GvpVa--tV~Id~~~ 131 (183)
T 1o4v_A 60 -YAKNAEE-RGIE--VIIAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIV-QMPGGVPVA--TVAINNAK 131 (183)
T ss_dssp -HHHHTTT-TTCC--EEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHH-TCCTTCCCE--ECCTTCHH
T ss_pred -HHHHHHh-CCCc--EEEEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHh-cCCCCCeeE--EEecCCch
Confidence 2111110 1122 46665553 3444444 6799999998542 2222211 22 55 54322 22222455
Q ss_pred CHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhh
Q 043859 421 GREEIKTMVRRILVDEEGYEIRAKVKELQRSAQKAW 456 (484)
Q Consensus 421 ~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~ 456 (484)
++..++..|. -+.|+. ++++.+.++....+.+
T Consensus 132 nAa~lAaqIl-a~~d~~---l~~kL~~~r~~~~~~v 163 (183)
T 1o4v_A 132 NAGILAASIL-GIKYPE---IARKVKEYKERMKREV 163 (183)
T ss_dssp HHHHHHHHHH-HTTCHH---HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-hcCCHH---HHHHHHHHHHHHHHHH
Confidence 6666665554 345655 8888888888766555
No 149
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=43.60 E-value=22 Score=27.72 Aligned_cols=34 Identities=15% Similarity=0.188 Sum_probs=24.7
Q ss_pred CCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecC
Q 043859 6 SKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVA 45 (484)
Q Consensus 6 ~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~ 45 (484)
+.|||+++-. |.+- ..+|+.|.++ ||+|+++...
T Consensus 3 ~~m~i~IiG~---G~iG--~~~a~~L~~~-g~~v~~~d~~ 36 (140)
T 1lss_A 3 HGMYIIIAGI---GRVG--YTLAKSLSEK-GHDIVLIDID 36 (140)
T ss_dssp --CEEEEECC---SHHH--HHHHHHHHHT-TCEEEEEESC
T ss_pred CCCEEEEECC---CHHH--HHHHHHHHhC-CCeEEEEECC
Confidence 3589988843 6554 3578999999 9999988754
No 150
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=43.52 E-value=1.9e+02 Score=26.34 Aligned_cols=109 Identities=11% Similarity=0.093 Sum_probs=64.9
Q ss_pred CCCCeEEEEcCCCccChHHHHHHHHHHHhcC-CCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCCCCCCCCCc
Q 043859 5 SSKPHAVLLASPGVGHVIPVLELGKRLVTLY-NFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDISGLVDPDA 83 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P~l~La~~L~~r~-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 83 (484)
.+++||+++..+. || .+.+|..+-.+-. +.+|..+.+..... +...+..+ +.+..+|... ...
T Consensus 103 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~I~~Visn~~~~---~~~A~~~g----Ip~~~~~~~~------~~r 166 (302)
T 3o1l_A 103 AQKKRVVLMASRE-SH--CLADLLHRWHSDELDCDIACVISNHQDL---RSMVEWHD----IPYYHVPVDP------KDK 166 (302)
T ss_dssp TSCCEEEEEECSC-CH--HHHHHHHHHHTTCSCSEEEEEEESSSTT---HHHHHTTT----CCEEECCCCS------SCC
T ss_pred CCCcEEEEEEeCC-ch--hHHHHHHHHHCCCCCcEEEEEEECcHHH---HHHHHHcC----CCEEEcCCCc------CCH
Confidence 3578998887665 54 5667776665421 47888887754321 23455555 6666555311 000
Q ss_pred hHHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCc-hhhHHHHHHHhCCCeEEEeccc
Q 043859 84 AVVTIISVIMREIKPAFRSAISALKTTPTALIVDLF-GTESLAIAEELQIPKYVYVGTN 141 (484)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~-~~~~~~~A~~lgIP~v~~~~~~ 141 (484)
....+.+.+.++++ +||+||.-.+ ..-...+-+.+.-.++-+.++.
T Consensus 167 ----------~~~~~~~~~~l~~~--~~DliVlagym~IL~~~~l~~~~~~~INiHpSl 213 (302)
T 3o1l_A 167 ----------EPAFAEVSRLVGHH--QADVVVLARYMQILPPQLCREYAHQVINIHHSF 213 (302)
T ss_dssp ----------HHHHHHHHHHHHHT--TCSEEEESSCCSCCCTTHHHHTTTCEEEEESSC
T ss_pred ----------HHHHHHHHHHHHHh--CCCEEEHhHhhhhcCHHHHhhhhCCeEEeCccc
Confidence 01234567788888 9999997644 3334456666666778777653
No 151
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=43.15 E-value=52 Score=32.95 Aligned_cols=35 Identities=6% Similarity=0.087 Sum_probs=27.8
Q ss_pred HHHHHHHHhcCCCCeEEEeCCchhhHHHHHHHhCCCeEEE
Q 043859 98 PAFRSAISALKTTPTALIVDLFGTESLAIAEELQIPKYVY 137 (484)
Q Consensus 98 ~~l~~~l~~~~~~pD~VI~D~~~~~~~~~A~~lgIP~v~~ 137 (484)
..+.+++++. +||++|.... ...+|+++|||++.+
T Consensus 446 ~el~~~i~~~--~pDl~ig~~~---~~~~a~k~gIP~~~~ 480 (533)
T 1mio_A 446 HDMEVVLEKL--KPDMFFAGIK---EKFVIQKGGVLSKQL 480 (533)
T ss_dssp HHHHHHHHHH--CCSEEEECHH---HHHHHHHTTCEEEET
T ss_pred HHHHHHHHhc--CCCEEEcccc---hhHHHHhcCCCEEEe
Confidence 3577888888 9999998732 467899999999854
No 152
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=43.03 E-value=29 Score=30.25 Aligned_cols=43 Identities=23% Similarity=0.313 Sum_probs=31.3
Q ss_pred hHHHHHHHHhcCCCCeEEEeCCchhh-------HHHHHHHhCCCeEEEec
Q 043859 97 KPAFRSAISALKTTPTALIVDLFGTE-------SLAIAEELQIPKYVYVG 139 (484)
Q Consensus 97 ~~~l~~~l~~~~~~pD~VI~D~~~~~-------~~~~A~~lgIP~v~~~~ 139 (484)
.+.+.++++++...||+|++|..... +..+...+++|+|-+.=
T Consensus 90 ~P~~l~al~~L~~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVAK 139 (225)
T 2w36_A 90 GPLFLKAWEKLRTKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAK 139 (225)
T ss_dssp HHHHHHHHTTCCSCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEES
T ss_pred hHHHHHHHHhcCCCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEEe
Confidence 46677777888778999999976554 22355567999998763
No 153
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=42.82 E-value=1.1e+02 Score=28.84 Aligned_cols=42 Identities=5% Similarity=-0.035 Sum_probs=35.7
Q ss_pred CeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchh
Q 043859 8 PHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSA 50 (484)
Q Consensus 8 ~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~ 50 (484)
--++|...|+.|-..=++.++..+..+ |..|.|+..+...+.
T Consensus 75 ~li~I~G~pGsGKTtlal~la~~~~~~-g~~vlyi~~E~s~~~ 116 (366)
T 1xp8_A 75 RITEIYGPESGGKTTLALAIVAQAQKA-GGTCAFIDAEHALDP 116 (366)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHHHHHT-TCCEEEEESSCCCCH
T ss_pred cEEEEEcCCCCChHHHHHHHHHHHHHC-CCeEEEEECCCChhH
Confidence 346667778999999999999999988 899999999976544
No 154
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=42.70 E-value=31 Score=29.24 Aligned_cols=40 Identities=18% Similarity=0.237 Sum_probs=33.7
Q ss_pred CeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCch
Q 043859 8 PHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTS 49 (484)
Q Consensus 8 ~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~ 49 (484)
+||++...++.|-+ =...+.+.|+++ |++|.++.++.-..
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~-g~~V~vv~T~~A~~ 41 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEEL-DFSVDLVISRNAKV 41 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHT-TCEEEEEECHHHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHC-CCEEEEEEChhHHH
Confidence 48999888888855 579999999999 99999999986443
No 155
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=42.57 E-value=18 Score=29.17 Aligned_cols=40 Identities=15% Similarity=0.194 Sum_probs=30.5
Q ss_pred CCCeEEEE--cCCCccChHHHHHHHHHHHhcCCCeEEEEecCC
Q 043859 6 SKPHAVLL--ASPGVGHVIPVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 6 ~~~~il~~--~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
+-|+++++ |.-..-.+.-.+=++..|.++ ||+|++++++.
T Consensus 5 ~~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~-G~~v~VA~npA 46 (157)
T 1kjn_A 5 STGKALMVLGCPESPVQIPLAIYTSHKLKKK-GFRVTVTANPA 46 (157)
T ss_dssp -CCEEEEECCCSCSTTHHHHHHHHHHHHHHT-TCEEEEEECHH
T ss_pred cceeeeEEecCCCCcchhhHHHHHHHHHHhc-CCeeEEecCHH
Confidence 35665554 444666777788899999999 99999999984
No 156
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=41.50 E-value=15 Score=33.81 Aligned_cols=39 Identities=8% Similarity=0.078 Sum_probs=26.8
Q ss_pred CCCCCCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecC
Q 043859 1 MESSSSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVA 45 (484)
Q Consensus 1 m~~~~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~ 45 (484)
|+....+|+|.|+-.+..| ..+|+.|.+. ||+|+++...
T Consensus 1 M~~~~~~~~I~iIG~G~mG-----~~~a~~l~~~-G~~V~~~dr~ 39 (303)
T 3g0o_A 1 MSLTGTDFHVGIVGLGSMG-----MGAARSCLRA-GLSTWGADLN 39 (303)
T ss_dssp ------CCEEEEECCSHHH-----HHHHHHHHHT-TCEEEEECSC
T ss_pred CCCCCCCCeEEEECCCHHH-----HHHHHHHHHC-CCeEEEEECC
Confidence 5556667899999776666 3688999999 9999987543
No 157
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=41.30 E-value=14 Score=36.28 Aligned_cols=32 Identities=9% Similarity=0.151 Sum_probs=25.8
Q ss_pred CCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEE
Q 043859 5 SSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVT 40 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt 40 (484)
+.+|+-+|+++ .+=.-++.+|+.|.+. |+++.
T Consensus 7 ~~~i~~aLISV---sDK~glvelAk~L~~l-GfeI~ 38 (523)
T 3zzm_A 7 RRPIRRALISV---YDKTGLVDLAQGLSAA-GVEII 38 (523)
T ss_dssp CCCCCEEEEEE---SSCTTHHHHHHHHHHT-TCEEE
T ss_pred cccccEEEEEE---eccccHHHHHHHHHHC-CCEEE
Confidence 55677777777 4567789999999998 89886
No 158
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=41.03 E-value=1.7e+02 Score=28.46 Aligned_cols=96 Identities=20% Similarity=0.157 Sum_probs=57.7
Q ss_pred CCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHH---hhhccCCCceEEEecCCCCCCCCCCCCc
Q 043859 7 KPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKI---LQSAMSSKLCHVIEIPAPDISGLVDPDA 83 (484)
Q Consensus 7 ~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 83 (484)
.+|++++.-+ .-.+.|++.|.+- |.+|+.+.+....+...+.+ ++..+. ....+. .+.
T Consensus 312 gkrv~i~~~~-----~~~~~l~~~L~el-G~~vv~v~~~~~~~~~~~~~~~ll~~~~~-~~~~v~------------~~~ 372 (458)
T 1mio_B 312 GKKVALLGDP-----DEIIALSKFIIEL-GAIPKYVVTGTPGMKFQKEIDAMLAEAGI-EGSKVK------------VEG 372 (458)
T ss_dssp TCEEEEEECH-----HHHHHHHHHHHTT-TCEEEEEEESSCCHHHHHHHHHHHHTTTC-CSCEEE------------ESC
T ss_pred CCEEEEEcCc-----hHHHHHHHHHHHC-CCEEEEEEeCCCCHHHHHHHHHHHHhcCC-CCCEEE------------ECC
Confidence 3577766543 4456788888887 89998877765544333322 122110 000110 000
Q ss_pred hHHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCchhhHHHHHHHhCCCeEEEe
Q 043859 84 AVVTIISVIMREIKPAFRSAISALKTTPTALIVDLFGTESLAIAEELQIPKYVYV 138 (484)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~~~~~~~~A~~lgIP~v~~~ 138 (484)
+ ..++++++++. +||++|.+.. ...+|+++|||++.+.
T Consensus 373 d------------~~~l~~~i~~~--~pDl~ig~~~---~~~~a~k~gip~~~~~ 410 (458)
T 1mio_B 373 D------------FFDVHQWIKNE--GVDLLISNTY---GKFIAREENIPFVRFG 410 (458)
T ss_dssp B------------HHHHHHHHHHS--CCSEEEESGG---GHHHHHHHTCCEEECS
T ss_pred C------------HHHHHHHHHhc--CCCEEEeCcc---hHHHHHHcCCCEEEee
Confidence 1 12356777788 9999998853 4677999999998753
No 159
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=40.71 E-value=1.7e+02 Score=24.99 Aligned_cols=109 Identities=5% Similarity=-0.081 Sum_probs=62.4
Q ss_pred CeEEEEcCCCccChHHHHHHHHHHHhcC-CCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCCCCCCCCCchHH
Q 043859 8 PHAVLLASPGVGHVIPVLELGKRLVTLY-NFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDISGLVDPDAAVV 86 (484)
Q Consensus 8 ~~il~~~~p~~GHv~P~l~La~~L~~r~-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 86 (484)
|||+++..+..+ -+.++.++|.+.. +|+|..+.+...... .....+..+ +.+..++...+. .
T Consensus 4 ~ki~vl~sG~g~---~~~~~l~~l~~~~l~~~I~~Vit~~~~~~-v~~~A~~~g----Ip~~~~~~~~~~-----~---- 66 (212)
T 3av3_A 4 KRLAVFASGSGT---NFQAIVDAAKRGDLPARVALLVCDRPGAK-VIERAAREN----VPAFVFSPKDYP-----S---- 66 (212)
T ss_dssp EEEEEECCSSCH---HHHHHHHHHHTTCCCEEEEEEEESSTTCH-HHHHHHHTT----CCEEECCGGGSS-----S----
T ss_pred cEEEEEEECCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCCcH-HHHHHHHcC----CCEEEeCccccc-----c----
Confidence 477777666533 3667778887652 489987776643222 223344444 544443321111 0
Q ss_pred HHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCc-hhhHHHHHHHhCCCeEEEeccc
Q 043859 87 TIISVIMREIKPAFRSAISALKTTPTALIVDLF-GTESLAIAEELQIPKYVYVGTN 141 (484)
Q Consensus 87 ~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~-~~~~~~~A~~lgIP~v~~~~~~ 141 (484)
.....+.+.+.++++ +||++|+-.+ ..-...+-......++-++++.
T Consensus 67 ------~~~~~~~~~~~l~~~--~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpSL 114 (212)
T 3av3_A 67 ------KAAFESEILRELKGR--QIDWIALAGYMRLIGPTLLSAYEGKIVNIHPSL 114 (212)
T ss_dssp ------HHHHHHHHHHHHHHT--TCCEEEESSCCSCCCHHHHHHTTTCEEEEESSC
T ss_pred ------hhhhHHHHHHHHHhc--CCCEEEEchhhhhCCHHHHhhhcCCEEEEecCc
Confidence 011223566778888 9999997643 3344456666777788887653
No 160
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=40.50 E-value=57 Score=28.20 Aligned_cols=44 Identities=11% Similarity=-0.012 Sum_probs=29.9
Q ss_pred EecCCcchh-hhccCCCccccccccCchhHHHHHh---------cCCceeeccc
Q 043859 347 VVPQWAPQI-DILSHPSVGGFLSHCGWNSTLESIT---------NGVPMIVWPL 390 (484)
Q Consensus 347 ~v~~~ipq~-~vL~~~~~~~~ItHgG~gs~~eal~---------~GvP~v~~P~ 390 (484)
.+...+++. .++...+...++--||.||.-|... +++|++.+-.
T Consensus 94 ~~~~~f~~Rk~~~~~~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 94 RAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp EEESSHHHHHHHHHHTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred eecCCHHHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 344566653 3444434447888999999988762 4899999864
No 161
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=39.92 E-value=21 Score=30.03 Aligned_cols=41 Identities=12% Similarity=0.074 Sum_probs=33.1
Q ss_pred CeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchh
Q 043859 8 PHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSA 50 (484)
Q Consensus 8 ~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~ 50 (484)
+||++.-.++.|=+ =...+.+.|+++ |++|.++.++.-...
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~-g~~V~vv~T~~A~~f 43 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQH-FDEVNILFSPSSKNF 43 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTT-SSCEEEEECGGGGGT
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHC-CCEEEEEEchhHHHH
Confidence 37777777777666 678999999999 999999999965544
No 162
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=39.71 E-value=2.9e+02 Score=27.27 Aligned_cols=93 Identities=16% Similarity=0.118 Sum_probs=56.9
Q ss_pred CCeEEEEcCCCccChHHHHHHHHHH-HhcCCCeEEEEecCCCch-hHHHHHhhhccCCCceEEEecCCCCCCCCCCCCch
Q 043859 7 KPHAVLLASPGVGHVIPVLELGKRL-VTLYNFQVTIFVVASQTS-AAESKILQSAMSSKLCHVIEIPAPDISGLVDPDAA 84 (484)
Q Consensus 7 ~~~il~~~~p~~GHv~P~l~La~~L-~~r~Gh~Vt~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 84 (484)
.+|++++.-+ .-.+.+++.| .+- |-+|..+++..... ...+..++..+ -... + .. +
T Consensus 303 Gkrv~i~gd~-----~~~~~l~~~L~~el-Gm~vv~~gt~~~~~~~~~~~~l~~~~----~~v~-~---------~~--D 360 (511)
T 2xdq_B 303 GKKAVVFGDN-----THAAAMTKILSREM-GIHVVWAGTYCKYDADWFRAEVAGFC----DEVL-I---------TD--D 360 (511)
T ss_dssp TCEEEEEECH-----HHHHHHHHHHHHHH-CCEEEEEEESCGGGHHHHHHHHTTTS----SEEE-E---------CC--C
T ss_pred CCEEEEEcCC-----hHHHHHHHHHHHhC-CCEEEEeecCCCCchHHHHHHHHhcC----CcEE-E---------eC--C
Confidence 4688887422 3477899999 788 99998887764321 11122223222 1110 0 00 1
Q ss_pred HHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCchhhHHHHHHHhCCCeEEEe
Q 043859 85 VVTIISVIMREIKPAFRSAISALKTTPTALIVDLFGTESLAIAEELQIPKYVYV 138 (484)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~~~~~~~~A~~lgIP~v~~~ 138 (484)
. .++.+.+++. +||++|.+. ....+|+++|||++.+.
T Consensus 361 ~------------~el~~~i~~~--~pDl~ig~~---~~r~~a~k~gip~~~i~ 397 (511)
T 2xdq_B 361 H------------TVVGDAIARV--EPAAIFGTQ---MERHVGKRLNIPCGVIA 397 (511)
T ss_dssp H------------HHHHHHHHHH--CCSEEEECH---HHHHHHHHHTCCEEECS
T ss_pred H------------HHHHHHHHhc--CCCEEEecc---chHHHHHhcCCCeEecc
Confidence 1 1566778888 999999873 25567899999988753
No 163
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=38.69 E-value=47 Score=29.00 Aligned_cols=27 Identities=19% Similarity=0.170 Sum_probs=23.7
Q ss_pred ccccccCchhHHHHHhcCCceeeccccc
Q 043859 365 GFLSHCGWNSTLESITNGVPMIVWPLYS 392 (484)
Q Consensus 365 ~~ItHgG~gs~~eal~~GvP~v~~P~~~ 392 (484)
++|+.||.......- .++|+|-++..+
T Consensus 66 VIISRGgta~~Lr~~-~~iPVV~I~vs~ 92 (225)
T 2pju_A 66 AIIAAGSNGAYLKSR-LSVPVILIKPSG 92 (225)
T ss_dssp EEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred EEEeCChHHHHHHhh-CCCCEEEecCCH
Confidence 899999999999975 689999999753
No 164
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=38.65 E-value=1.7e+02 Score=24.36 Aligned_cols=141 Identities=13% Similarity=0.142 Sum_probs=73.9
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCCCCCCcccCCCCCCCCCccCCCchhHHHhhcCCceEecC
Q 043859 271 VLYVSFGSGGTLTYEQITELAWGLELSQQRFIWVVRLPNETTGDGSFFTAGSGAGDDDLSSLLPDGFLSRTLDIGVVVPQ 350 (484)
Q Consensus 271 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~ 350 (484)
.|-|-+||. .+....+++...|+..|..+=..+.. ....|+.+.+
T Consensus 23 ~V~IimGS~--SD~~v~~~a~~~L~~~Gi~~dv~V~S----------------------aHR~p~~l~~----------- 67 (182)
T 1u11_A 23 VVGIIMGSQ--SDWETMRHADALLTELEIPHETLIVS----------------------AHRTPDRLAD----------- 67 (182)
T ss_dssp SEEEEESSG--GGHHHHHHHHHHHHHTTCCEEEEECC----------------------TTTCHHHHHH-----------
T ss_pred EEEEEECcH--HHHHHHHHHHHHHHHcCCCeEEEEEc----------------------ccCCHHHHHH-----------
Confidence 355556653 35567888888888888876554421 2445553322
Q ss_pred CcchhhhccCCCccccccccCc----hhHHHHHhcCCceeecccccc--cchhHHHHHhh--hcceEEeeecCCC--Ccc
Q 043859 351 WAPQIDILSHPSVGGFLSHCGW----NSTLESITNGVPMIVWPLYSE--QRMNATILTEE--LGVAIRSKVLPSK--GVV 420 (484)
Q Consensus 351 ~ipq~~vL~~~~~~~~ItHgG~----gs~~eal~~GvP~v~~P~~~D--Q~~na~rv~~~--~G~g~~l~~~~~~--~~~ 420 (484)
|+.+.+- ...+ ++|.-.|. .++.-++ .-+|+|.+|.... ....+..-.-+ -|+.+ .+...+ ...
T Consensus 68 ~~~~a~~-~g~~--ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~GvpV--atV~I~~a~~~ 141 (182)
T 1u11_A 68 YARTAAE-RGLN--VIIAGAGGAAHLPGMCAAW-TRLPVLGVPVESRALKGMDSLLSIVQMPGGVPV--GTLAIGASGAK 141 (182)
T ss_dssp HHHHTTT-TTCC--EEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHCCCTTSCC--EECCSSHHHHH
T ss_pred HHHHHHh-CCCc--EEEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCce--EEEecCCccch
Confidence 2111110 1122 46665553 3455454 4799999998542 22222111114 45553 221111 224
Q ss_pred CHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhh
Q 043859 421 GREEIKTMVRRILVDEEGYEIRAKVKELQRSAQKAW 456 (484)
Q Consensus 421 ~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~ 456 (484)
++.-++..|. -+.|+. ++++.+.+++...+.+
T Consensus 142 nAallAaqIl-a~~d~~---l~~kL~~~r~~~~~~v 173 (182)
T 1u11_A 142 NAALLAASIL-ALYNPA---LAARLETWRALQTASV 173 (182)
T ss_dssp HHHHHHHHHH-GGGCHH---HHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHH-ccCCHH---HHHHHHHHHHHHHHHH
Confidence 4444554443 345555 8999999888877655
No 165
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=38.41 E-value=1.5e+02 Score=23.74 Aligned_cols=38 Identities=13% Similarity=0.175 Sum_probs=30.2
Q ss_pred CCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCc
Q 043859 7 KPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQT 48 (484)
Q Consensus 7 ~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~ 48 (484)
..+++|+..+. | +.|++++++.|.++ |.+|+++ .....
T Consensus 23 ~~~~llIaGG~-G-ItPl~sm~~~l~~~-~~~v~l~-g~r~~ 60 (158)
T 3lrx_A 23 FGKILAIGAYT-G-IVEVYPIAKAWQEI-GNDVTTL-HVTFE 60 (158)
T ss_dssp CSEEEEEEETT-H-HHHHHHHHHHHHHH-TCEEEEE-EECBG
T ss_pred CCeEEEEEccC-c-HHHHHHHHHHHHhc-CCcEEEE-EeCCH
Confidence 35777777665 3 99999999999998 8999999 65543
No 166
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=38.39 E-value=33 Score=29.19 Aligned_cols=28 Identities=11% Similarity=0.143 Sum_probs=24.2
Q ss_pred cccccccCchhHHHHHhcCCceeeccccc
Q 043859 364 GGFLSHCGWNSTLESITNGVPMIVWPLYS 392 (484)
Q Consensus 364 ~~~ItHgG~gs~~eal~~GvP~v~~P~~~ 392 (484)
.++|+.||.......- .++|+|-+|..+
T Consensus 53 dVIISRGgta~~lr~~-~~iPVV~I~~s~ 80 (196)
T 2q5c_A 53 DAIISRGATSDYIKKS-VSIPSISIKVTR 80 (196)
T ss_dssp SEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred eEEEECChHHHHHHHh-CCCCEEEEcCCH
Confidence 3899999999999975 679999999754
No 167
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=38.19 E-value=1e+02 Score=27.80 Aligned_cols=42 Identities=14% Similarity=0.282 Sum_probs=32.4
Q ss_pred CCeEEEEc--CCCccChHHHHHHHHHHHhcCCCeEEEEecCCCch
Q 043859 7 KPHAVLLA--SPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTS 49 (484)
Q Consensus 7 ~~~il~~~--~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~ 49 (484)
+.+++.++ -|+.|-..=...||..|++. |.+|.++-......
T Consensus 91 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~-G~rVLLID~D~~~~ 134 (286)
T 3la6_A 91 QNNVLMMTGVSPSIGMTFVCANLAAVISQT-NKRVLLIDCDMRKG 134 (286)
T ss_dssp TCCEEEEEESSSSSSHHHHHHHHHHHHHTT-TCCEEEEECCTTTC
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhC-CCCEEEEeccCCCC
Confidence 33444443 36899999999999999999 99999998775443
No 168
>1u94_A RECA protein, recombinase A; homologous recombination, ATPase, DNA repair, DNA binding protein; 1.90A {Escherichia coli} SCOP: c.37.1.11 d.48.1.1 PDB: 1u98_A 1u99_A 1xms_A* 1xmv_A* 2rec_A 2reb_A 1n03_A* 1rea_A 1aa3_A
Probab=37.97 E-value=2e+02 Score=26.93 Aligned_cols=42 Identities=5% Similarity=-0.043 Sum_probs=35.4
Q ss_pred CeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchh
Q 043859 8 PHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSA 50 (484)
Q Consensus 8 ~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~ 50 (484)
.-+++...|+.|-..=++.++..+.++ |..|.|+..+...+.
T Consensus 64 ~ii~I~G~pGsGKTtLal~la~~~~~~-g~~vlyid~E~s~~~ 105 (356)
T 1u94_A 64 RIVEIYGPESSGKTTLTLQVIAAAQRE-GKTCAFIDAEHALDP 105 (356)
T ss_dssp SEEEEECSTTSSHHHHHHHHHHHHHHT-TCCEEEEESSCCCCH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHC-CCeEEEEeCCCCccH
Confidence 346777778999999999999999998 899999999865543
No 169
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=37.65 E-value=77 Score=28.93 Aligned_cols=26 Identities=12% Similarity=0.082 Sum_probs=23.1
Q ss_pred ccccccCchhHHHHHh------cCCceeeccc
Q 043859 365 GFLSHCGWNSTLESIT------NGVPMIVWPL 390 (484)
Q Consensus 365 ~~ItHgG~gs~~eal~------~GvP~v~~P~ 390 (484)
++|.-||-||++|++. .++|+-++|.
T Consensus 66 ~vv~~GGDGTl~~v~~~l~~~~~~~~l~iiP~ 97 (304)
T 3s40_A 66 LIIVFGGDGTVFECTNGLAPLEIRPTLAIIPG 97 (304)
T ss_dssp EEEEEECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred EEEEEccchHHHHHHHHHhhCCCCCcEEEecC
Confidence 7999999999999864 5799999997
No 170
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=37.48 E-value=82 Score=29.01 Aligned_cols=40 Identities=10% Similarity=0.126 Sum_probs=33.4
Q ss_pred eEEEEcC-CCccChHHHHHHHHHHHhcCCCeEEEEecCCCchh
Q 043859 9 HAVLLAS-PGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSA 50 (484)
Q Consensus 9 ~il~~~~-p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~ 50 (484)
+|+|++. ++-|-..-..+||..|+++ |++|.++.... ...
T Consensus 15 ~i~v~sgKGGvGKTTvA~~LA~~lA~~-G~rVLlvD~D~-~~~ 55 (324)
T 3zq6_A 15 TFVFIGGKGGVGKTTISAATALWMARS-GKKTLVISTDP-AHS 55 (324)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHHHHT-TCCEEEEECCS-SCC
T ss_pred EEEEEeCCCCchHHHHHHHHHHHHHHC-CCcEEEEeCCC-CcC
Confidence 4555544 7999999999999999999 99999999987 443
No 171
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=37.35 E-value=20 Score=32.96 Aligned_cols=39 Identities=13% Similarity=0.184 Sum_probs=29.6
Q ss_pred CCCCCCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecC
Q 043859 1 MESSSSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVA 45 (484)
Q Consensus 1 m~~~~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~ 45 (484)
|+.+...|+|.|+-.+.-|. .+|+.|.+. ||+|+++...
T Consensus 3 m~~~~~~~~IgiIG~G~mG~-----~~A~~l~~~-G~~V~~~dr~ 41 (306)
T 3l6d_A 3 LSDESFEFDVSVIGLGAMGT-----IMAQVLLKQ-GKRVAIWNRS 41 (306)
T ss_dssp CCCCCCSCSEEEECCSHHHH-----HHHHHHHHT-TCCEEEECSS
T ss_pred CCcccCCCeEEEECCCHHHH-----HHHHHHHHC-CCEEEEEeCC
Confidence 45556678999997766553 689999999 9999877433
No 172
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=37.09 E-value=50 Score=28.99 Aligned_cols=43 Identities=19% Similarity=0.298 Sum_probs=31.2
Q ss_pred hHHHHHHHHhcCCCCeEEEeCCchhh-------HHHHHHHhCCCeEEEec
Q 043859 97 KPAFRSAISALKTTPTALIVDLFGTE-------SLAIAEELQIPKYVYVG 139 (484)
Q Consensus 97 ~~~l~~~l~~~~~~pD~VI~D~~~~~-------~~~~A~~lgIP~v~~~~ 139 (484)
.+.+.++++++...||+|++|..-.. +..+.-.+|+|+|-+.=
T Consensus 94 ~P~ll~al~~L~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVAK 143 (237)
T 3goc_A 94 IPTVLAALDALPCPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVAK 143 (237)
T ss_dssp HHHHHHHHHTSSSCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEES
T ss_pred HHHHHHHHHhcCCCCCEEEEeCceeecCCCcchhheeeeecCCCEEeeec
Confidence 46677778888778999999965432 23466678999998763
No 173
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=36.54 E-value=1.5e+02 Score=23.23 Aligned_cols=114 Identities=13% Similarity=0.152 Sum_probs=59.8
Q ss_pred CCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhH-HHHHhhhccCCCceEEEecCCCCCCCCCCCCchH
Q 043859 7 KPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAA-ESKILQSAMSSKLCHVIEIPAPDISGLVDPDAAV 85 (484)
Q Consensus 7 ~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 85 (484)
..+++|+..+. =+-|++++++.|.++ |.+|+++ .....+.+ .+.-++... ..+.+....... . ....+-
T Consensus 18 ~~~~llIaGG~--GiaPl~sm~~~l~~~-~~~v~l~-g~R~~~~~~~~~el~~l~--~~~~~~~~~~~~--~--~~~~d~ 87 (142)
T 3lyu_A 18 FGKILAIGAYT--GIVEVYPIAKAWQEI-GNDVTTL-HVTFEPMVILKEELEKAV--TRHIVEPVPLNP--N--QDFLAN 87 (142)
T ss_dssp CSEEEEEEETT--HHHHHHHHHHHHHHT-TCEEEEE-EEEEGGGCCSHHHHHTTS--SEEEEEEECCCT--T--SCHHHH
T ss_pred CCeEEEEECcC--cHHHHHHHHHHHHhc-CCcEEEE-EeCCHHHhhHHHHHHHHH--hheEEEEeeccc--c--cCCCCC
Confidence 35777777665 389999999999998 8999998 55433221 122223332 223332221110 0 001111
Q ss_pred HHHHHHHHHHhhHHHHHHHHhcCCCCe-EEEeCCch--hhHHHHHHHhCCCeE
Q 043859 86 VTIISVIMREIKPAFRSAISALKTTPT-ALIVDLFG--TESLAIAEELQIPKY 135 (484)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~l~~~~~~pD-~VI~D~~~--~~~~~~A~~lgIP~v 135 (484)
.......+. +.+++++.+. ..| +.+|-+-. -....+++..|||..
T Consensus 88 ~~g~~G~v~---~~l~~~~~~~--~~~~vy~CGP~~Mm~av~~~l~~~~~~~~ 135 (142)
T 3lyu_A 88 MKNVSQRLK---EKVRELLESE--DWDLVFMVGPVGDQKQVFEVVKEYGVPML 135 (142)
T ss_dssp HHHHHHHHH---HHHHHHHHSS--CCSEEEEESCHHHHHHHHHHHHHHTCCBC
T ss_pred CCCCccchh---HHHHHhcccC--CCCEEEEECCHHHHHHHHHHHHHcCCchh
Confidence 111111121 2344555544 555 66777633 344468888999964
No 174
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=36.28 E-value=27 Score=30.47 Aligned_cols=38 Identities=13% Similarity=0.005 Sum_probs=34.3
Q ss_pred CeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCC
Q 043859 8 PHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 8 ~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
|||+|..-++.|=..=...||..|+++ |++|.++=...
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~-g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASD-YDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTT-CSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHC-CCeEEEEeCCC
Confidence 689997778999999999999999999 99999987765
No 175
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=34.84 E-value=1.5e+02 Score=24.92 Aligned_cols=62 Identities=27% Similarity=0.440 Sum_probs=40.5
Q ss_pred EEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCC--chhHHHHHhhhccCCCceEEEecCCC
Q 043859 10 AVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQ--TSAAESKILQSAMSSKLCHVIEIPAP 73 (484)
Q Consensus 10 il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~ 73 (484)
|+|+.-+...+-.....+++.|++. |++|..++.... .+. -+.+++....+.+.++..+|..
T Consensus 110 iil~~~~~~~~~~~~~~~a~~lk~~-gi~v~~Ig~G~~~~~~~-l~~la~~~n~~~~s~~~~~~~~ 173 (192)
T 2x5n_A 110 VAFVGSPIVEDEKNLIRLAKRMKKN-NVAIDIIHIGELQNESA-LQHFIDAANSSDSCHLVSIPPS 173 (192)
T ss_dssp EEEECSCCSSCHHHHHHHHHHHHHT-TEEEEEEEESCC---CH-HHHHHHHHCSTTCCEEEEECCC
T ss_pred EEEEECCCCCCchhHHHHHHHHHHC-CCEEEEEEeCCCCccHH-HHHHHHhccCCCceEEEEecCc
Confidence 4555555556778889999999999 999998775432 222 3444444333345777777753
No 176
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=34.83 E-value=65 Score=27.15 Aligned_cols=57 Identities=12% Similarity=0.205 Sum_probs=35.9
Q ss_pred HhhhcceEEeeecCCCCccCHHHHHHHHHHHhcccc----hHHHHHHHHHHHHHHHH--hhh-cCCCChHHHHH
Q 043859 402 TEELGVAIRSKVLPSKGVVGREEIKTMVRRILVDEE----GYEIRAKVKELQRSAQK--AWT-RESGSSYSSLA 468 (484)
Q Consensus 402 ~~~~G~g~~l~~~~~~~~~~~~~l~~~i~~vl~~~~----~~~~~~~a~~l~~~~~~--a~~-~~~g~~~~~~~ 468 (484)
.+..|+|+.+ |+++|.++|.++++..+ -+.|+ +.-.+-..+++ .+. ..+..-...++
T Consensus 108 e~~cGVGV~V---------T~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~~p~LkWAd~~~vK~~vD 171 (187)
T 3tl4_X 108 NENSGVGIEI---------TEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKNLKELKWADPRSFKPIID 171 (187)
T ss_dssp HHTTTTTCCC---------CHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHTCGGGTTSCTTSHHHHHH
T ss_pred HHHCCCCeEe---------CHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhcccCCCCCCHHHHHHHHH
Confidence 3678999774 89999999999996422 12355 66666666654 222 34444444555
No 177
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=34.82 E-value=56 Score=24.60 Aligned_cols=40 Identities=20% Similarity=0.261 Sum_probs=30.2
Q ss_pred CCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecC
Q 043859 5 SSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVA 45 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~ 45 (484)
++.|||+++|..|.|+-.=.-.|-+.+.++ |.++.+-+..
T Consensus 2 ~~~mkIlvvC~~G~~TSll~~kl~~~~~~~-gi~~~i~~~~ 41 (109)
T 2l2q_A 2 PGSMNILLVCGAGMSTSMLVQRIEKYAKSK-NINATIEAIA 41 (109)
T ss_dssp CCCEEEEEESSSSCSSCHHHHHHHHHHHHH-TCSEEEEEEC
T ss_pred CCceEEEEECCChHhHHHHHHHHHHHHHHC-CCCeEEEEec
Confidence 345899999999999886666777788888 8876654444
No 178
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=34.05 E-value=18 Score=32.72 Aligned_cols=26 Identities=15% Similarity=0.065 Sum_probs=23.1
Q ss_pred ccccccCchhHHHHHhc------CCceeeccc
Q 043859 365 GFLSHCGWNSTLESITN------GVPMIVWPL 390 (484)
Q Consensus 365 ~~ItHgG~gs~~eal~~------GvP~v~~P~ 390 (484)
++|+=||-||++++... ++|++.+|.
T Consensus 38 ~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~ 69 (272)
T 2i2c_A 38 IVISIGGDGTFLSAFHQYEERLDEIAFIGIHT 69 (272)
T ss_dssp EEEEEESHHHHHHHHHHTGGGTTTCEEEEEES
T ss_pred EEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeC
Confidence 89999999999999765 889999975
No 179
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=34.02 E-value=2.7e+02 Score=25.29 Aligned_cols=103 Identities=18% Similarity=0.233 Sum_probs=54.7
Q ss_pred CeEEEEcCCCcc---C--hHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCCCCCCCCC
Q 043859 8 PHAVLLASPGVG---H--VIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDISGLVDPD 82 (484)
Q Consensus 8 ~~il~~~~p~~G---H--v~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 82 (484)
..|+|.|....+ . ..-+..+++.|.++ |++|.++..+.-.+ ..+.+.+..+.........+.. .
T Consensus 181 ~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~-~~~vvl~g~~~e~~-~~~~i~~~~~~~~~~~~~~l~g-----~---- 249 (348)
T 1psw_A 181 PMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE-GYQVVLFGSAKDHE-AGNEILAALNTEQQAWCRNLAG-----E---- 249 (348)
T ss_dssp CEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT-TCEEEECCCGGGHH-HHHHHHTTSCHHHHTTEEECTT-----T----
T ss_pred cEEEEECCCCccccCCCCHHHHHHHHHHHHHC-CCeEEEEeChhhHH-HHHHHHHhhhhccccceEeccC-----c----
Confidence 355565544222 2 33788999999999 89999876654221 1122222211000001111111 0
Q ss_pred chHHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCchhhHHHHHHHhCCCeEEEec
Q 043859 83 AAVVTIISVIMREIKPAFRSAISALKTTPTALIVDLFGTESLAIAEELQIPKYVYVG 139 (484)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~~~~~~~~A~~lgIP~v~~~~ 139 (484)
. ...++..+++ .-|++|+- ..+...+|..+|+|+|.++.
T Consensus 250 ~------------sl~e~~ali~----~a~l~I~~--Dsg~~HlAaa~g~P~v~lfg 288 (348)
T 1psw_A 250 T------------QLDQAVILIA----ACKAIVTN--DSGLMHVAAALNRPLVALYG 288 (348)
T ss_dssp S------------CHHHHHHHHH----TSSEEEEE--SSHHHHHHHHTTCCEEEEES
T ss_pred C------------CHHHHHHHHH----hCCEEEec--CCHHHHHHHHcCCCEEEEEC
Confidence 0 1123445555 55888864 24455668889999999874
No 180
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=33.57 E-value=91 Score=26.89 Aligned_cols=42 Identities=12% Similarity=0.030 Sum_probs=31.6
Q ss_pred CCCeEEEEcC--CCccChHHHHHHHHHHHhcCCCeEEEEecCCC
Q 043859 6 SKPHAVLLAS--PGVGHVIPVLELGKRLVTLYNFQVTIFVVASQ 47 (484)
Q Consensus 6 ~~~~il~~~~--p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~ 47 (484)
++++++.+.. ++.|-..=...||..|+++.|++|.++=....
T Consensus 2 ~~~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~~ 45 (245)
T 3ea0_A 2 NAKRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISLP 45 (245)
T ss_dssp -CCEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECCTT
T ss_pred CCCeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECCCC
Confidence 3455554443 69999999999999998743799999987654
No 181
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=33.48 E-value=41 Score=31.89 Aligned_cols=40 Identities=15% Similarity=0.279 Sum_probs=29.8
Q ss_pred CCCCeEEEEcCCCcc-C---hHHHHHHHHHH-HhcCCCeEEEEecC
Q 043859 5 SSKPHAVLLASPGVG-H---VIPVLELGKRL-VTLYNFQVTIFVVA 45 (484)
Q Consensus 5 ~~~~~il~~~~p~~G-H---v~P~l~La~~L-~~r~Gh~Vt~~~~~ 45 (484)
|+||||+++..+-.+ | +.-..+++++| .++ ||+|+.+...
T Consensus 1 m~k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~-g~~v~~i~~~ 45 (377)
T 1ehi_A 1 MTKKRVALIFGGNSSEHDVSKRSAQNFYNAIEATG-KYEIIVFAIA 45 (377)
T ss_dssp --CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHS-SEEEEEEEEC
T ss_pred CCCcEEEEEeCCCCCCcceeHHHHHHHHHHhCccc-CcEEEEEEEc
Confidence 357899999776444 3 33578899999 999 9999999755
No 182
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=33.36 E-value=26 Score=32.61 Aligned_cols=34 Identities=21% Similarity=0.277 Sum_probs=28.1
Q ss_pred CCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecC
Q 043859 6 SKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVA 45 (484)
Q Consensus 6 ~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~ 45 (484)
+.|||+++-.++.| ..+|..|.+. ||+|+++...
T Consensus 2 ~~mkI~IiGaG~~G-----~~~a~~L~~~-g~~V~~~~r~ 35 (335)
T 3ghy_A 2 SLTRICIVGAGAVG-----GYLGARLALA-GEAINVLARG 35 (335)
T ss_dssp CCCCEEEESCCHHH-----HHHHHHHHHT-TCCEEEECCH
T ss_pred CCCEEEEECcCHHH-----HHHHHHHHHC-CCEEEEEECh
Confidence 46899999887777 4578999999 9999998864
No 183
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=33.34 E-value=1.8e+02 Score=24.03 Aligned_cols=145 Identities=12% Similarity=0.137 Sum_probs=72.4
Q ss_pred CCeEEEEecCCCCCCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCCCCCCcccCCCCCCCCCccCCCchhHHHhhcCCceE
Q 043859 268 SESVLYVSFGSGGTLTYEQITELAWGLELSQQRFIWVVRLPNETTGDGSFFTAGSGAGDDDLSSLLPDGFLSRTLDIGVV 347 (484)
Q Consensus 268 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~ 347 (484)
++|.|-|-+||.. +....++....++..|..+-..+.. ....|+.+.+
T Consensus 11 ~~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~s----------------------aHR~p~~l~~-------- 58 (173)
T 4grd_A 11 SAPLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVS----------------------AHRMPDEMFD-------- 58 (173)
T ss_dssp SSCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC----------------------TTTSHHHHHH--------
T ss_pred CCCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEc----------------------cccCHHHHHH--------
Confidence 3456666777743 5566888888888888876554421 2445553322
Q ss_pred ecCCcchhhhccCCCccccccccCc----hhHHHHHhcCCceeeccccccc---chhHHHHHhhhcceEEeeecCCC--C
Q 043859 348 VPQWAPQIDILSHPSVGGFLSHCGW----NSTLESITNGVPMIVWPLYSEQ---RMNATILTEELGVAIRSKVLPSK--G 418 (484)
Q Consensus 348 v~~~ipq~~vL~~~~~~~~ItHgG~----gs~~eal~~GvP~v~~P~~~DQ---~~na~rv~~~~G~g~~l~~~~~~--~ 418 (484)
|+.... ...++++|.-.|. .++.-+ ..-+|+|.+|..... .+--.-++ +.=-|+.+.+.... .
T Consensus 59 ---~~~~a~---~~g~~ViIa~AG~aahLpgvvA~-~t~~PVIgVPv~~~~l~G~dsLlSiv-qMP~Gvpvatv~i~~~~ 130 (173)
T 4grd_A 59 ---YAEKAR---ERGLRAIIAGAGGAAHLPGMLAA-KTTVPVLGVPVASKYLKGVDSLHSIV-QMPKGVPVATFAIGEAG 130 (173)
T ss_dssp ---HHHHHT---TTTCSEEEEEEESSCCHHHHHHH-HCCSCEEEEEECCTTTTTHHHHHHHH-CCCTTSCCEECCSSHHH
T ss_pred ---HHHHHH---hcCCeEEEEeccccccchhhhee-cCCCCEEEEEcCCCCCCchhHHHHHH-hCCCCCCceEEecCCcc
Confidence 221111 1112245555443 344444 347999999975432 22111222 33333333221010 1
Q ss_pred ccCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhh
Q 043859 419 VVGREEIKTMVRRILVDEEGYEIRAKVKELQRSAQKAW 456 (484)
Q Consensus 419 ~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~ 456 (484)
..++.-++..|. -+.|++ ++++.++++++.++.+
T Consensus 131 a~NAallA~~IL-a~~d~~---l~~kl~~~r~~~~~~v 164 (173)
T 4grd_A 131 AANAALFAVSIL-SGNSVD---YANRLAAFRVRQNEAA 164 (173)
T ss_dssp HHHHHHHHHHHH-TTSCHH---HHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHH-cCCCHH---HHHHHHHHHHHHHHHH
Confidence 222333333321 234555 8888888888866554
No 184
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=33.14 E-value=32 Score=29.89 Aligned_cols=44 Identities=9% Similarity=-0.015 Sum_probs=30.2
Q ss_pred eEecCCcchh-h-hccCCCccccccccCchhHHHHH---------hcCCceeeccc
Q 043859 346 VVVPQWAPQI-D-ILSHPSVGGFLSHCGWNSTLESI---------TNGVPMIVWPL 390 (484)
Q Consensus 346 v~v~~~ipq~-~-vL~~~~~~~~ItHgG~gs~~eal---------~~GvP~v~~P~ 390 (484)
+.+...++.. . +...++ .+++--||.||.-|.. .+++|++.+-.
T Consensus 89 ~~~~~~~~~Rk~~~~~~sd-a~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 143 (216)
T 1ydh_A 89 VRVVADMHERKAAMAQEAE-AFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNV 143 (216)
T ss_dssp EEEESSHHHHHHHHHHHCS-EEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECG
T ss_pred ccccCCHHHHHHHHHHhCC-EEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecC
Confidence 4444555543 3 334455 3788899999988776 57999999964
No 185
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=32.71 E-value=2.5e+02 Score=25.39 Aligned_cols=99 Identities=12% Similarity=0.072 Sum_probs=53.6
Q ss_pred CCeEEEEcCCCcc--C--hHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCCCCCCCCC
Q 043859 7 KPHAVLLASPGVG--H--VIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDISGLVDPD 82 (484)
Q Consensus 7 ~~~il~~~~p~~G--H--v~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 82 (484)
+..|+|.|..+.. . ..-+..|++.|.++ |++|.++...+......+.+.+..+ ++. +- +.
T Consensus 178 ~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~-~~~vvl~~g~~~e~~~~~~i~~~~~---~~~---l~-----g~---- 241 (326)
T 2gt1_A 178 GEYAVFLHATTRDDKHWPEEHWRELIGLLADS-GIRIKLPWGAPHEEERAKRLAEGFA---YVE---VL-----PK---- 241 (326)
T ss_dssp TSEEEEECCCSSGGGSCCHHHHHHHHHHTTTT-CCEEEECCSSHHHHHHHHHHHTTCT---TEE---EC-----CC----
T ss_pred CCEEEEEeCCCCccccCCHHHHHHHHHHHHHC-CCcEEEecCCHHHHHHHHHHHhhCC---ccc---cc-----CC----
Confidence 3456666654321 1 33688999999988 8998876332211111222222222 121 11 00
Q ss_pred chHHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCchhhHHHHHHHhCCCeEEEec
Q 043859 83 AAVVTIISVIMREIKPAFRSAISALKTTPTALIVDLFGTESLAIAEELQIPKYVYVG 139 (484)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~~~~~~~~A~~lgIP~v~~~~ 139 (484)
.+ ..++..+++ +-|++|+- ..+...+|..+|+|+|.++.
T Consensus 242 ~s------------l~el~ali~----~a~l~I~~--DSG~~HlAaa~g~P~v~lfg 280 (326)
T 2gt1_A 242 MS------------LEGVARVLA----GAKFVVSV--DTGLSHLTAALDRPNITVYG 280 (326)
T ss_dssp CC------------HHHHHHHHH----TCSEEEEE--SSHHHHHHHHTTCCEEEEES
T ss_pred CC------------HHHHHHHHH----hCCEEEec--CCcHHHHHHHcCCCEEEEEC
Confidence 01 123345555 55888865 23455667779999999874
No 186
>3cmu_A Protein RECA, recombinase A; homologous recombination, recombination/DNA complex; HET: DNA ADP; 4.20A {Escherichia coli}
Probab=32.61 E-value=2.9e+02 Score=32.72 Aligned_cols=107 Identities=5% Similarity=-0.103 Sum_probs=0.0
Q ss_pred EEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCCCCCCCCCchHHHHH
Q 043859 10 AVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDISGLVDPDAAVVTII 89 (484)
Q Consensus 10 il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 89 (484)
+++..-|+.|-..=++++|..+... |..|.|++.+.....+.+..+.-.. .++.+. +..
T Consensus 735 ilIaG~PG~GKTtLalqlA~~~a~~-g~~VlyiS~Ees~~ql~A~rlG~~~--~~l~i~-------~~~----------- 793 (2050)
T 3cmu_A 735 VEIYGPESSGKTTLTLQVIAAAQRE-GKTCAFIDAEHALDPIYARKLGVDI--DNLLCS-------QPD----------- 793 (2050)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHHTT-TCCEEEECTTSCCCHHHHHHTTCCT--TTCEEE-------CCS-----------
T ss_pred EEEEcCCCCCHHHHHHHHHHHHHhc-CCcEEEEECCCcHHHHHHHHcCCCc--cceEEe-------cCC-----------
Q ss_pred HHHHHHhhHHHHHHHHhcCCCCeEEEeCC----------------------------chhhHHHHHHHhCCCeEEEeccc
Q 043859 90 SVIMREIKPAFRSAISALKTTPTALIVDL----------------------------FGTESLAIAEELQIPKYVYVGTN 141 (484)
Q Consensus 90 ~~~~~~~~~~l~~~l~~~~~~pD~VI~D~----------------------------~~~~~~~~A~~lgIP~v~~~~~~ 141 (484)
........++.+.++. .+++||.|+ +......+|+.++||++.+...+
T Consensus 794 --~i~~i~~~~r~l~~~~--~~~LVIIDsLq~i~~~~~~~~~~Gs~~q~La~Reis~ilr~Lk~lAke~~v~VI~l~Qv~ 869 (2050)
T 3cmu_A 794 --TGEQALEICDALARSG--AVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIR 869 (2050)
T ss_dssp --SHHHHHHHHHHHHHHT--CCSEEEESCGGGCCCHHHHHSCTTCCCTTHHHHHHHHHHHHHHHHHHTTTCEEEEEECCE
T ss_pred --CHHHHHHHHHHHhhcc--CCCEEEEcchhhhcccccccCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCEEEEecccc
No 187
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=32.54 E-value=38 Score=31.15 Aligned_cols=33 Identities=21% Similarity=0.166 Sum_probs=27.7
Q ss_pred CCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCC
Q 043859 7 KPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 7 ~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
+|+|+++..+ -...+++++.++ ||+|.++....
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~-G~~v~~~~~~~ 34 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDE-GFETIAFGSSK 34 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHT-TCCEEEESCGG
T ss_pred ceEEEEECCh------hHHHHHHHHHhC-CCEEEEEECCC
Confidence 5899998876 567899999999 99999887664
No 188
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=32.35 E-value=45 Score=30.88 Aligned_cols=35 Identities=14% Similarity=0.058 Sum_probs=29.0
Q ss_pred CCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecC
Q 043859 6 SKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVA 45 (484)
Q Consensus 6 ~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~ 45 (484)
..+||.|+-.++.| +-++|+.|.++ ||+|+..=..
T Consensus 3 ~~~~i~~iGiGg~G----ms~~A~~L~~~-G~~V~~~D~~ 37 (326)
T 3eag_A 3 AMKHIHIIGIGGTF----MGGLAAIAKEA-GFEVSGCDAK 37 (326)
T ss_dssp CCCEEEEESCCSHH----HHHHHHHHHHT-TCEEEEEESS
T ss_pred CCcEEEEEEECHHH----HHHHHHHHHhC-CCEEEEEcCC
Confidence 35799999999988 45699999999 9999976543
No 189
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=31.96 E-value=42 Score=32.92 Aligned_cols=35 Identities=23% Similarity=0.153 Sum_probs=27.9
Q ss_pred HHHHHHHhcCCCCeEEEeCCchhhHHHHHHHhCCCeEEEe
Q 043859 99 AFRSAISALKTTPTALIVDLFGTESLAIAEELQIPKYVYV 138 (484)
Q Consensus 99 ~l~~~l~~~~~~pD~VI~D~~~~~~~~~A~~lgIP~v~~~ 138 (484)
.+++++++. +||++|.... ...+|+++|||++.+.
T Consensus 366 ~le~~i~~~--~pDllig~~~---~~~~a~k~gip~~~~g 400 (458)
T 3pdi_B 366 DLEHAARAG--QAQLVIGNSH---ALASARRLGVPLLRAG 400 (458)
T ss_dssp HHHHHHHHH--TCSEEEECTT---HHHHHHHTTCCEEECS
T ss_pred HHHHHHHhc--CCCEEEEChh---HHHHHHHcCCCEEEec
Confidence 356778888 9999999854 4578999999988753
No 190
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=31.96 E-value=32 Score=32.16 Aligned_cols=35 Identities=14% Similarity=0.113 Sum_probs=26.1
Q ss_pred CCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecC
Q 043859 5 SSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVA 45 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~ 45 (484)
|++|||+++-.+..|. .+|..|.+. ||+|+++...
T Consensus 2 m~~mki~iiG~G~~G~-----~~a~~L~~~-g~~V~~~~r~ 36 (359)
T 1bg6_A 2 IESKTYAVLGLGNGGH-----AFAAYLALK-GQSVLAWDID 36 (359)
T ss_dssp --CCEEEEECCSHHHH-----HHHHHHHHT-TCEEEEECSC
T ss_pred CCcCeEEEECCCHHHH-----HHHHHHHhC-CCEEEEEeCC
Confidence 4568999997766663 478889998 9999987543
No 191
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=31.92 E-value=75 Score=24.68 Aligned_cols=27 Identities=7% Similarity=0.160 Sum_probs=22.5
Q ss_pred cChHHHHHHHHHHHhcCCCeE-EEEecCC
Q 043859 19 GHVIPVLELGKRLVTLYNFQV-TIFVVAS 46 (484)
Q Consensus 19 GHv~P~l~La~~L~~r~Gh~V-t~~~~~~ 46 (484)
-.....+.+|..+.+. ||+| .++-...
T Consensus 15 ~~~~~al~~a~a~~~~-g~~v~~vff~~d 42 (130)
T 2hy5_A 15 QASDSAYQFAKAALEK-GHEIFRVFFYHD 42 (130)
T ss_dssp THHHHHHHHHHHHHHT-TCEEEEEEECGG
T ss_pred HHHHHHHHHHHHHHhc-CCeeCEEEEech
Confidence 4567889999999999 9999 8887774
No 192
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=31.46 E-value=77 Score=32.60 Aligned_cols=100 Identities=11% Similarity=0.153 Sum_probs=55.7
Q ss_pred CeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchh------HHHHHhhhccCCCceEEEecCCCCCCCCCCC
Q 043859 8 PHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSA------AESKILQSAMSSKLCHVIEIPAPDISGLVDP 81 (484)
Q Consensus 8 ~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 81 (484)
|||+|+..|..| ...-++|.++ ||+|..+.+.+.... -.....+..+ +.+.... .. .
T Consensus 1 ~ri~~~~s~~~~-----~~~l~~l~~~-~~~i~~v~t~~~~~~~~~~~~~~~~~a~~~~----ip~~~~~-----~~-~- 63 (660)
T 1z7e_A 1 MKTVVFAYHDMG-----CLGIEALLAA-GYEISAIFTHTDNPGEKAFYGSVARLAAERG----IPVYAPD-----NV-N- 63 (660)
T ss_dssp CEEEEEECHHHH-----HHHHHHHHHT-TCEEEEEECCCC--------CCHHHHHHHHT----CCEECCS-----CT-T-
T ss_pred CEEEEEEeCHHH-----HHHHHHHHhC-CCCEEEEEeCCCCCccCcCccHHHHHHHHcC----CCEeccC-----CC-C-
Confidence 688888655432 2335677778 899998887654321 0122333444 3333211 11 0
Q ss_pred CchHHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCc-hhhHHHHHHHhCCCeEEEeccc
Q 043859 82 DAAVVTIISVIMREIKPAFRSAISALKTTPTALIVDLF-GTESLAIAEELQIPKYVYVGTN 141 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~-~~~~~~~A~~lgIP~v~~~~~~ 141 (484)
.+.+.+.++++ +||+||+=.+ ..-...+-......++.++++.
T Consensus 64 ---------------~~~~~~~l~~~--~~d~iv~~~~~~il~~~~l~~~~~~~iNiH~sl 107 (660)
T 1z7e_A 64 ---------------HPLWVERIAQL--SPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSL 107 (660)
T ss_dssp ---------------SHHHHHHHHHH--CCSEEEEESCCSCCCHHHHTTCTTCEEEEESSS
T ss_pred ---------------cHHHHHHHHhc--CCCEEEEcCcccccCHHHHhcCCCCeEEecCCc
Confidence 11345677888 9999997543 3333445555566678888763
No 193
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=31.28 E-value=30 Score=30.39 Aligned_cols=35 Identities=9% Similarity=0.188 Sum_probs=29.3
Q ss_pred CCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecC
Q 043859 5 SSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVA 45 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~ 45 (484)
..+|+|.|+-.+..|- .||+.|+++ ||+|+.+...
T Consensus 4 ~~~mkI~IIG~G~~G~-----sLA~~L~~~-G~~V~~~~~~ 38 (232)
T 3dfu_A 4 APRLRVGIFDDGSSTV-----NMAEKLDSV-GHYVTVLHAP 38 (232)
T ss_dssp CCCCEEEEECCSCCCS-----CHHHHHHHT-TCEEEECSSG
T ss_pred CCCcEEEEEeeCHHHH-----HHHHHHHHC-CCEEEEecCH
Confidence 4579999999998884 689999999 9999976653
No 194
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=31.24 E-value=20 Score=32.09 Aligned_cols=53 Identities=17% Similarity=0.221 Sum_probs=37.5
Q ss_pred CCCccccccccCchhHHHHHhc---CCceeecccccccchhHHHHHhhhcceEEeeecCCCCccCHHHHHHHHHHHhcc
Q 043859 360 HPSVGGFLSHCGWNSTLESITN---GVPMIVWPLYSEQRMNATILTEELGVAIRSKVLPSKGVVGREEIKTMVRRILVD 435 (484)
Q Consensus 360 ~~~~~~~ItHgG~gs~~eal~~---GvP~v~~P~~~DQ~~na~rv~~~~G~g~~l~~~~~~~~~~~~~l~~~i~~vl~~ 435 (484)
.++ ++|+=||-||+++++.. ++|++.++. + ..|.- ..+.++++.+++++++++
T Consensus 41 ~~D--~vv~~GGDGTll~~a~~~~~~~PilGIn~-G-----------~~Gfl---------~~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 41 TAD--LIVVVGGDGTVLKAAKKAADGTPMVGFKA-G-----------RLGFL---------TSYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp CCS--EEEEEECHHHHHHHHTTBCTTCEEEEEES-S-----------SCCSS---------CCBCGGGHHHHHHHHHTT
T ss_pred CCC--EEEEEeCcHHHHHHHHHhCCCCCEEEEEC-C-----------CCCcc---------CcCCHHHHHHHHHHHHcC
Confidence 456 89999999999999876 788888863 1 01111 124567788888887765
No 195
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=31.23 E-value=89 Score=29.25 Aligned_cols=27 Identities=30% Similarity=0.565 Sum_probs=20.9
Q ss_pred CCCccccccccCchhH---HHHHhcCCceeec
Q 043859 360 HPSVGGFLSHCGWNST---LESITNGVPMIVW 388 (484)
Q Consensus 360 ~~~~~~~ItHgG~gs~---~eal~~GvP~v~~ 388 (484)
+++ ++|++||.-++ .-|-..|+|.++.
T Consensus 92 ~PD--vVi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 92 RPV--CVLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp CCS--EEEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred CCC--EEEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 566 89999998765 4566789999863
No 196
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=31.21 E-value=2.2e+02 Score=25.87 Aligned_cols=34 Identities=9% Similarity=0.187 Sum_probs=20.5
Q ss_pred CCCeEEEEcCCCccChHHHHHHHHHHHhcCC--CeEEEEec
Q 043859 6 SKPHAVLLASPGVGHVIPVLELGKRLVTLYN--FQVTIFVV 44 (484)
Q Consensus 6 ~~~~il~~~~p~~GHv~P~l~La~~L~~r~G--h~Vt~~~~ 44 (484)
+.|+|+++ ++.|.+- ..|+++|.++ | ++|+.+..
T Consensus 23 ~~~~vlVt--GatG~iG--~~l~~~L~~~-g~~~~v~~~~~ 58 (346)
T 4egb_A 23 NAMNILVT--GGAGFIG--SNFVHYMLQS-YETYKIINFDA 58 (346)
T ss_dssp -CEEEEEE--TTTSHHH--HHHHHHHHHH-CTTEEEEEEEC
T ss_pred CCCeEEEE--CCccHHH--HHHHHHHHhh-CCCcEEEEEec
Confidence 34666655 3445443 4788999999 8 55555443
No 197
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=31.02 E-value=98 Score=23.50 Aligned_cols=65 Identities=12% Similarity=0.078 Sum_probs=45.5
Q ss_pred ccCCCccccccccCchh---------HHHHHhcCCceeecccccccchhHHHHHhhhcceEEeeecCCCCccCHHHHHHH
Q 043859 358 LSHPSVGGFLSHCGWNS---------TLESITNGVPMIVWPLYSEQRMNATILTEELGVAIRSKVLPSKGVVGREEIKTM 428 (484)
Q Consensus 358 L~~~~~~~~ItHgG~gs---------~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~g~~l~~~~~~~~~~~~~l~~~ 428 (484)
++.++ ++|--.|..| +..|...|+|++++=.++.+. .-..+ ++.+.-+. ..+.+.|.++
T Consensus 36 I~~~~--~vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l-~~~a~~iV--------~Wn~~~I~~a 103 (111)
T 1eiw_A 36 PEDAD--AVIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPEL-EAVSSEVV--------GWNPHCIRDA 103 (111)
T ss_dssp SSSCS--EEEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTH-HHHCSEEE--------CSCHHHHHHH
T ss_pred cccCC--EEEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHH-HhhCceec--------cCCHHHHHHH
Confidence 45666 6888888887 667888999999998777652 22223 34444433 5688999999
Q ss_pred HHHHhc
Q 043859 429 VRRILV 434 (484)
Q Consensus 429 i~~vl~ 434 (484)
|...+.
T Consensus 104 I~~~~~ 109 (111)
T 1eiw_A 104 LEDALD 109 (111)
T ss_dssp HHHHHC
T ss_pred HHhccC
Confidence 988753
No 198
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=30.93 E-value=2.5e+02 Score=23.93 Aligned_cols=109 Identities=11% Similarity=-0.023 Sum_probs=60.0
Q ss_pred CeEEEEcCCCccChHHHHHHHHHHHhcC-CCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCCCCCCCCCchHH
Q 043859 8 PHAVLLASPGVGHVIPVLELGKRLVTLY-NFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDISGLVDPDAAVV 86 (484)
Q Consensus 8 ~~il~~~~p~~GHv~P~l~La~~L~~r~-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 86 (484)
+||+++..+.-+. +.+|.+.+.+.. +|+|..+.+.+..... ....+..+ +.+..++..... . .
T Consensus 1 ~riaVl~SG~Gs~---L~aLi~~~~~~~~~~~I~~Vvs~~~~~~~-~~~A~~~g----Ip~~~~~~~~~~-----~---r 64 (209)
T 1meo_A 1 ARVAVLISGTGSN---LQALIDSTREPNSSAQIDIVISNKAAVAG-LDKAERAG----IPTRVINHKLYK-----N---R 64 (209)
T ss_dssp CEEEEEESSSCTT---HHHHHHHHHSTTCSCEEEEEEESSTTCHH-HHHHHHTT----CCEEECCGGGSS-----S---H
T ss_pred CeEEEEEECCchH---HHHHHHHHhcCCCCcEEEEEEeCCCChHH-HHHHHHcC----CCEEEECccccC-----c---h
Confidence 4677766655443 445556665432 6899888776544321 23344444 544433321111 0 0
Q ss_pred HHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCc-hhhHHHHHHHhCCCeEEEeccc
Q 043859 87 TIISVIMREIKPAFRSAISALKTTPTALIVDLF-GTESLAIAEELQIPKYVYVGTN 141 (484)
Q Consensus 87 ~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~-~~~~~~~A~~lgIP~v~~~~~~ 141 (484)
....+.+.+.++++ +||+||+-.+ ..-...+-......++.+.++.
T Consensus 65 -------~~~~~~~~~~l~~~--~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpSL 111 (209)
T 1meo_A 65 -------VEFDSAIDLVLEEF--SIDIVCLAGFMRILSGPFVQKWNGKMLNIHPSL 111 (209)
T ss_dssp -------HHHHHHHHHHHHHT--TCCEEEEESCCSCCCHHHHHHTTTSEEEEESSS
T ss_pred -------hhhhHHHHHHHHhc--CCCEEEEcchhhhCCHHHHhhhcCCEEEEccCc
Confidence 11123466778888 9999986643 3334455566667788877653
No 199
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=30.91 E-value=1.6e+02 Score=28.35 Aligned_cols=36 Identities=6% Similarity=0.037 Sum_probs=25.9
Q ss_pred CCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCC
Q 043859 5 SSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
|..+||+++.- |. -.+.+++++++. |++|+.+.+..
T Consensus 4 m~~~kiLI~g~---g~--~a~~i~~aa~~~-G~~~v~v~~~~ 39 (446)
T 3ouz_A 4 MEIKSILIANR---GE--IALRALRTIKEM-GKKAICVYSEA 39 (446)
T ss_dssp TCCCEEEECCC---HH--HHHHHHHHHHHT-TCEEEEEEEGG
T ss_pred cccceEEEECC---CH--HHHHHHHHHHHc-CCEEEEEEcCc
Confidence 43457777542 32 567899999999 99999887554
No 200
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=30.91 E-value=3e+02 Score=24.87 Aligned_cols=109 Identities=9% Similarity=0.041 Sum_probs=65.5
Q ss_pred CCCCeEEEEcCCCccChHHHHHHHHHHHhcC-CCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCCCCCCCCCc
Q 043859 5 SSKPHAVLLASPGVGHVIPVLELGKRLVTLY-NFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDISGLVDPDA 83 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P~l~La~~L~~r~-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 83 (484)
.+++||+++..+. || -+.+|..+-.+-. ..+|..+.+..... +...+..+ +.+..+|... ..
T Consensus 93 ~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~---~~~A~~~g----Ip~~~~~~~~------~~- 155 (292)
T 3lou_A 93 AARPKVLIMVSKL-EH--CLADLLFRWKMGELKMDIVGIVSNHPDF---APLAAQHG----LPFRHFPITA------DT- 155 (292)
T ss_dssp TSCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSSTT---HHHHHHTT----CCEEECCCCS------SC-
T ss_pred CCCCEEEEEEcCC-Cc--CHHHHHHHHHcCCCCcEEEEEEeCcHHH---HHHHHHcC----CCEEEeCCCc------CC-
Confidence 4578998877554 54 5666666655421 36888888765322 23455555 6666665311 00
Q ss_pred hHHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCc-hhhHHHHHHHhCCCeEEEeccc
Q 043859 84 AVVTIISVIMREIKPAFRSAISALKTTPTALIVDLF-GTESLAIAEELQIPKYVYVGTN 141 (484)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~-~~~~~~~A~~lgIP~v~~~~~~ 141 (484)
. ....+.+.+.+++. +||+||.-.+ ..-...+-+.+.-.++-++++.
T Consensus 156 --r-------~~~~~~~~~~l~~~--~~Dlivla~y~~il~~~~l~~~~~~~iNiHpSl 203 (292)
T 3lou_A 156 --K-------AQQEAQWLDVFETS--GAELVILARYMQVLSPEASARLANRAINIHHSF 203 (292)
T ss_dssp --H-------HHHHHHHHHHHHHH--TCSEEEESSCCSCCCHHHHHHTTTSEEEEEEEC
T ss_pred --H-------HHHHHHHHHHHHHh--CCCEEEecCchhhCCHHHHhhhcCCeEEeCCCc
Confidence 0 11234677888889 9999997643 3444556666777778777653
No 201
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=30.22 E-value=57 Score=25.03 Aligned_cols=39 Identities=5% Similarity=-0.033 Sum_probs=28.8
Q ss_pred CCeEEEEcCCCccCh--HHHHHHHHHHHhcCC--CeEEEEecCC
Q 043859 7 KPHAVLLASPGVGHV--IPVLELGKRLVTLYN--FQVTIFVVAS 46 (484)
Q Consensus 7 ~~~il~~~~p~~GHv--~P~l~La~~L~~r~G--h~Vt~~~~~~ 46 (484)
.+|++|+-.-+.-.. +-.+..|...+++ | |+|.++...+
T Consensus 7 ~~K~~ivi~s~d~~~~~~~al~~A~~a~~~-G~~~eV~i~~~G~ 49 (117)
T 2fb6_A 7 NDKLTILWTTDNKDTVFNMLAMYALNSKNR-GWWKHINIILWGA 49 (117)
T ss_dssp TSEEEEEECCCCHHHHHHTHHHHHHHHHHH-TSCSEEEEEECSH
T ss_pred CCeEEEEEEcCChHHHHHHHHHHHHHHHHc-CCCCcEEEEEECC
Confidence 478877777643223 3477889999999 8 8999998874
No 202
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=30.20 E-value=2e+02 Score=22.69 Aligned_cols=96 Identities=13% Similarity=0.078 Sum_probs=56.0
Q ss_pred EEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCCCCCCCCCchHHHHHH
Q 043859 11 VLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDISGLVDPDAAVVTIIS 90 (484)
Q Consensus 11 l~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 90 (484)
+|+++.. .+-.-++.+|+.|.+. |+++. +| .... ..++..+ +.+..+..... +.+
T Consensus 27 vliSv~d-~dK~~l~~~a~~l~~l-Gf~i~-AT-~GTa-----~~L~~~G----i~v~~v~k~~e------gg~------ 81 (143)
T 2yvq_A 27 ILIGIQQ-SFRPRFLGVAEQLHNE-GFKLF-AT-EATS-----DWLNANN----VPATPVAWPSQ------EGQ------ 81 (143)
T ss_dssp EEEECCG-GGHHHHHHHHHHHHTT-TCEEE-EE-HHHH-----HHHHHTT----CCCEEECCGGG------C--------
T ss_pred EEEEecc-cchHHHHHHHHHHHHC-CCEEE-EC-chHH-----HHHHHcC----CeEEEEEeccC------CCc------
Confidence 6666643 4677899999999998 99854 33 3322 2344444 43333332111 100
Q ss_pred HHHHHhhHHHHHHHHhcCCCCeEEEeCCch--------hhHHHHHHHhCCCeEE
Q 043859 91 VIMREIKPAFRSAISALKTTPTALIVDLFG--------TESLAIAEELQIPKYV 136 (484)
Q Consensus 91 ~~~~~~~~~l~~~l~~~~~~pD~VI~D~~~--------~~~~~~A~~lgIP~v~ 136 (484)
....+.+.+++++- +.|+||.-+-. +.--..|-..|||+++
T Consensus 82 ---~~~~~~i~d~i~~g--~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T 130 (143)
T 2yvq_A 82 ---NPSLSSIRKLIRDG--SIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLT 130 (143)
T ss_dssp ------CBCHHHHHHTT--SCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEEC
T ss_pred ---ccccccHHHHHHCC--CceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEc
Confidence 00114566777776 99999985322 1223578889999775
No 203
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=30.19 E-value=33 Score=32.46 Aligned_cols=30 Identities=23% Similarity=0.255 Sum_probs=25.5
Q ss_pred CCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEE
Q 043859 7 KPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIF 42 (484)
Q Consensus 7 ~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~ 42 (484)
.|||+|+-.+--| +.+|..|+++ ||+|+++
T Consensus 1 sm~V~IVGaGpaG-----l~~A~~L~~~-G~~v~v~ 30 (412)
T 4hb9_A 1 SMHVGIIGAGIGG-----TCLAHGLRKH-GIKVTIY 30 (412)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHT-TCEEEEE
T ss_pred CCEEEEECcCHHH-----HHHHHHHHhC-CCCEEEE
Confidence 3899999777666 7889999999 9999987
No 204
>3aek_A Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_A* 3aes_A* 3aer_A* 3aet_A 3aeu_A
Probab=30.16 E-value=3.8e+02 Score=25.76 Aligned_cols=92 Identities=11% Similarity=-0.034 Sum_probs=53.5
Q ss_pred CCeEEEEcCCCccChHHHHHHHHHH-HhcCCCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCCCCCCCCCchH
Q 043859 7 KPHAVLLASPGVGHVIPVLELGKRL-VTLYNFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDISGLVDPDAAV 85 (484)
Q Consensus 7 ~~~il~~~~p~~GHv~P~l~La~~L-~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 85 (484)
.+|++++.-+. -.+.|++.| .+- |.+|..+.+........+..++..+ .+..+. .+.+
T Consensus 307 Gkrv~i~g~~~-----~~~~l~~~L~~el-G~~vv~~~~~~~~~~~~~~~l~~l~--~~~~v~------------~~~d- 365 (437)
T 3aek_A 307 GKSLFMFPDSQ-----LEIPLARFLAREC-GMKTTEIATPFLHKAIMAPDLALLP--SNTALT------------EGQD- 365 (437)
T ss_dssp TCEEEECSSSS-----CHHHHHHHHHHTT-CCEEEEEEESCCCHHHHHHHHTTSB--TTCEEE------------EECC-
T ss_pred CCEEEEEcCch-----HHHHHHHHHHHHc-CCEEEEEEecCCCHHHHHHHHHhcC--CCCEEE------------eCCC-
Confidence 46888876543 347788889 787 9999999886544332222233332 111110 0001
Q ss_pred HHHHHHHHHHhhHHHHHHHHhcCCCCeEEEeCCchhhHHHHHHHhCCCeE
Q 043859 86 VTIISVIMREIKPAFRSAISALKTTPTALIVDLFGTESLAIAEELQIPKY 135 (484)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~~~~~~~~A~~lgIP~v 135 (484)
..++.+.+++. +||++|.+.. .....++.|+|..
T Consensus 366 -----------~~e~~~~i~~~--~pDliig~~~---~~~p~~~~G~P~~ 399 (437)
T 3aek_A 366 -----------LEAQLDRHEAI--NPDLTVCGLG---LANPLEAKGHATK 399 (437)
T ss_dssp -----------HHHHHHHHHHH--CCSEEEECHH---HHHHHHTTTCCEE
T ss_pred -----------HHHHHHHHhcc--CCCEEEeCCc---cccHHHHCCCCEE
Confidence 11344667777 9999998832 2234566999964
No 205
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=30.10 E-value=24 Score=32.13 Aligned_cols=30 Identities=10% Similarity=-0.021 Sum_probs=24.8
Q ss_pred cCCCccccccccCchhHHHHHhc----CCceeeccc
Q 043859 359 SHPSVGGFLSHCGWNSTLESITN----GVPMIVWPL 390 (484)
Q Consensus 359 ~~~~~~~~ItHgG~gs~~eal~~----GvP~v~~P~ 390 (484)
..++ ++|+-||-||+++++.. ++|++.++.
T Consensus 62 ~~~D--~vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 62 QQAD--LAVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp HHCS--EEEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred cCCC--EEEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 3456 89999999999999743 789999973
No 206
>3ld9_A DTMP kinase, thymidylate kinase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 2.15A {Ehrlichia chaffeensis}
Probab=30.06 E-value=2.4e+02 Score=24.27 Aligned_cols=42 Identities=10% Similarity=0.077 Sum_probs=34.7
Q ss_pred CCCCeEEEEcCCCccChHHHHHHHHHHHh-cCCCeEEEEecCCC
Q 043859 5 SSKPHAVLLASPGVGHVIPVLELGKRLVT-LYNFQVTIFVVASQ 47 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P~l~La~~L~~-r~Gh~Vt~~~~~~~ 47 (484)
++++-|+|.-.++.|--.-.-.|++.|.. + |++|.+++-++.
T Consensus 19 ~~~~~i~~~G~~g~GKst~~~~l~~~l~~~~-g~~v~~~treP~ 61 (223)
T 3ld9_A 19 PGSMFITFEGIDGSGKTTQSHLLAEYLSEIY-GVNNVVLTREPG 61 (223)
T ss_dssp CCCEEEEEECSTTSSHHHHHHHHHHHHHHHH-CGGGEEEEESSC
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHhhcc-CceeeEeeeCCC
Confidence 34567888888999999999999999999 9 999988565543
No 207
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=29.98 E-value=91 Score=23.36 Aligned_cols=38 Identities=8% Similarity=0.055 Sum_probs=27.3
Q ss_pred CCCCCCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEe
Q 043859 1 MESSSSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFV 43 (484)
Q Consensus 1 m~~~~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~ 43 (484)
|...+++++|+++- .|-.-...+.+.|.+. |++|+.+.
T Consensus 1 M~~~~~~~~ilivd----d~~~~~~~l~~~L~~~-g~~v~~~~ 38 (130)
T 3eod_A 1 MTQPLVGKQILIVE----DEQVFRSLLDSWFSSL-GATTVLAA 38 (130)
T ss_dssp --CTTTTCEEEEEC----SCHHHHHHHHHHHHHT-TCEEEEES
T ss_pred CCCCCCCCeEEEEe----CCHHHHHHHHHHHHhC-CceEEEeC
Confidence 67778888999885 4555567778888888 89887644
No 208
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=29.64 E-value=1.3e+02 Score=23.48 Aligned_cols=50 Identities=14% Similarity=0.009 Sum_probs=33.2
Q ss_pred cCCceeecccccccchhHHHHHhhhcceEEeeecCCCCccCHHHHHHHHHHHhcccc
Q 043859 381 NGVPMIVWPLYSEQRMNATILTEELGVAIRSKVLPSKGVVGREEIKTMVRRILVDEE 437 (484)
Q Consensus 381 ~GvP~v~~P~~~DQ~~na~rv~~~~G~g~~l~~~~~~~~~~~~~l~~~i~~vl~~~~ 437 (484)
..+|+|++--..+. ...... -+.|+--.+. +.++.++|..+|.+++....
T Consensus 74 ~~~pii~ls~~~~~-~~~~~~-~~~g~~~~l~-----kP~~~~~L~~~i~~~~~~~~ 123 (155)
T 1qkk_A 74 PDLPMILVTGHGDI-PMAVQA-IQDGAYDFIA-----KPFAADRLVQSARRAEEKRR 123 (155)
T ss_dssp TTSCEEEEECGGGH-HHHHHH-HHTTCCEEEE-----SSCCHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCh-HHHHHH-HhcCCCeEEe-----CCCCHHHHHHHHHHHHHHHH
Confidence 47888888544443 233333 3567655554 57899999999999986533
No 209
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=29.60 E-value=58 Score=30.00 Aligned_cols=35 Identities=14% Similarity=0.374 Sum_probs=27.9
Q ss_pred CCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecC
Q 043859 5 SSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVA 45 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~ 45 (484)
.+.|+|.|+-.+..| ..+|+.|.+. ||+|+++...
T Consensus 29 ~~~~~I~iIG~G~mG-----~~~a~~l~~~-G~~V~~~dr~ 63 (320)
T 4dll_A 29 PYARKITFLGTGSMG-----LPMARRLCEA-GYALQVWNRT 63 (320)
T ss_dssp CCCSEEEEECCTTTH-----HHHHHHHHHT-TCEEEEECSC
T ss_pred cCCCEEEEECccHHH-----HHHHHHHHhC-CCeEEEEcCC
Confidence 345799999777777 6789999999 9999987544
No 210
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=29.57 E-value=22 Score=32.85 Aligned_cols=32 Identities=16% Similarity=0.048 Sum_probs=24.2
Q ss_pred hccCCCccccccccCchhHHHHHhc----CCceeeccc
Q 043859 357 ILSHPSVGGFLSHCGWNSTLESITN----GVPMIVWPL 390 (484)
Q Consensus 357 vL~~~~~~~~ItHgG~gs~~eal~~----GvP~v~~P~ 390 (484)
....++ ++|+-||-||+++++.. ++|++.++.
T Consensus 72 ~~~~~d--~vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 72 AADGCE--LVLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ----CC--CEEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred cccCCC--EEEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 334566 89999999999999754 889999874
No 211
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=29.55 E-value=63 Score=28.52 Aligned_cols=42 Identities=24% Similarity=0.165 Sum_probs=30.3
Q ss_pred hHHHHHHHHhcCCCCeEEEeCCchhh-------HHHHHHHhCCCeEEEe
Q 043859 97 KPAFRSAISALKTTPTALIVDLFGTE-------SLAIAEELQIPKYVYV 138 (484)
Q Consensus 97 ~~~l~~~l~~~~~~pD~VI~D~~~~~-------~~~~A~~lgIP~v~~~ 138 (484)
.+.+.++++++...||+|++|..-.. +..+.-.+++|+|-+.
T Consensus 96 ~P~ll~al~~L~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVA 144 (246)
T 3ga2_A 96 LPLIIEAAKKLETEPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIA 144 (246)
T ss_dssp HHHHHHHHHHCSSCCSCEEEEBCSSSSTTSCCHHHHHHHHHTSCEEEEE
T ss_pred HHHHHHHHHhcCCCCCEEEEcCcEEecCCCcchhheeeeecCCCEEeee
Confidence 35667777787778999999965332 2246667899999875
No 212
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=29.47 E-value=81 Score=29.26 Aligned_cols=26 Identities=19% Similarity=0.203 Sum_probs=22.7
Q ss_pred ccccccCchhHHHHHh------cCCceeeccc
Q 043859 365 GFLSHCGWNSTLESIT------NGVPMIVWPL 390 (484)
Q Consensus 365 ~~ItHgG~gs~~eal~------~GvP~v~~P~ 390 (484)
++|.-||-||++|++. .++|+.++|.
T Consensus 83 ~vvv~GGDGTv~~v~~~l~~~~~~~pl~iIP~ 114 (337)
T 2qv7_A 83 VLIAAGGDGTLNEVVNGIAEKPNRPKLGVIPM 114 (337)
T ss_dssp EEEEEECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred EEEEEcCchHHHHHHHHHHhCCCCCcEEEecC
Confidence 7999999999999863 4689999996
No 213
>3cmw_A Protein RECA, recombinase A; homologous recombination, recombination/DNA complex; HET: DNA ADP; 2.80A {Escherichia coli} PDB: 3cmt_A* 3cmx_A* 3cmv_A*
Probab=29.43 E-value=3.4e+02 Score=31.50 Aligned_cols=104 Identities=5% Similarity=-0.065 Sum_probs=0.0
Q ss_pred EEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCCCCCCCCCchHHHHH
Q 043859 10 AVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDISGLVDPDAAVVTII 89 (484)
Q Consensus 10 il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 89 (484)
+++...|+.|-..=+++++.....+ |..|.|++.+...+.+....+.-.. .++.+..-..
T Consensus 386 ilI~G~pGsGKTtLaLq~a~~~~~~-G~~vlyis~E~s~~~~~a~~lGvd~--~~L~i~~~~~----------------- 445 (1706)
T 3cmw_A 386 VEIYGPESSGKTTLTLQVIAAAQRE-GKTCAFIDAEHALDPIYARKLGVDI--DNLLCSQPDT----------------- 445 (1706)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHT-TCCEEEECTTSCCCHHHHHHTTCCG--GGCEEECCSS-----------------
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHh-CCCeEEEEccCchHHHHHHHcCCCH--HHeEEcCCCC-----------------
Q ss_pred HHHHHHhhHHHHHHHHhcCCCCeEEEeCCchhhH----------------------------HHHHHHhCCCeEEEe
Q 043859 90 SVIMREIKPAFRSAISALKTTPTALIVDLFGTES----------------------------LAIAEELQIPKYVYV 138 (484)
Q Consensus 90 ~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~~~~~----------------------------~~~A~~lgIP~v~~~ 138 (484)
.......++.++++. .+|+||.|+...-. ...|+++|+|++.+.
T Consensus 446 ---~e~~l~~l~~lv~~~--~~~lVVIDSL~al~~~~e~e~~~g~~~~~~q~r~~s~~Lr~L~~~ak~~~v~VI~in 517 (1706)
T 3cmw_A 446 ---GEQALEICDALARSG--AVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFIN 517 (1706)
T ss_dssp ---HHHHHHHHHHHHHHT--CCSEEEESCSTTCCCHHHHHSCTTCCCTTHHHHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred ---HHHHHHHHHHHHHhc--CCCEEEECCHHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHHcCCEEEEEe
No 214
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=29.26 E-value=38 Score=31.21 Aligned_cols=34 Identities=12% Similarity=0.223 Sum_probs=28.0
Q ss_pred CCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCC
Q 043859 7 KPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 7 ~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
+|||+++-.++.|- .+|..|.+. ||+|+++....
T Consensus 2 ~mkI~IiGaGaiG~-----~~a~~L~~~-g~~V~~~~r~~ 35 (320)
T 3i83_A 2 SLNILVIGTGAIGS-----FYGALLAKT-GHCVSVVSRSD 35 (320)
T ss_dssp -CEEEEESCCHHHH-----HHHHHHHHT-TCEEEEECSTT
T ss_pred CCEEEEECcCHHHH-----HHHHHHHhC-CCeEEEEeCCh
Confidence 37999998888774 578899998 99999998765
No 215
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=29.03 E-value=1.9e+02 Score=25.13 Aligned_cols=41 Identities=17% Similarity=0.105 Sum_probs=25.7
Q ss_pred CCCCCCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCC
Q 043859 1 MESSSSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 1 m~~~~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
|.-..+. ++++++..+.| ==.++|+.|.++ |++|+++.-..
T Consensus 1 M~~~~~~-k~vlVTGas~G---IG~aia~~l~~~-G~~V~~~~r~~ 41 (252)
T 3h7a_A 1 MSLTPRN-ATVAVIGAGDY---IGAEIAKKFAAE-GFTVFAGRRNG 41 (252)
T ss_dssp ----CCS-CEEEEECCSSH---HHHHHHHHHHHT-TCEEEEEESSG
T ss_pred CCcCCCC-CEEEEECCCch---HHHHHHHHHHHC-CCEEEEEeCCH
Confidence 4433433 55666665543 236899999999 99999887643
No 216
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=28.96 E-value=42 Score=30.97 Aligned_cols=23 Identities=9% Similarity=0.081 Sum_probs=19.6
Q ss_pred HHHHHHHHHHhcCCCeEEEEecCC
Q 043859 23 PVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 23 P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
--.++|+++.++ |++|+|++.+.
T Consensus 67 mG~aiAe~~~~~-Ga~V~lv~g~~ 89 (313)
T 1p9o_A 67 RGATSAEAFLAA-GYGVLFLYRAR 89 (313)
T ss_dssp HHHHHHHHHHHT-TCEEEEEEETT
T ss_pred HHHHHHHHHHHC-CCEEEEEecCC
Confidence 345789999999 99999999864
No 217
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=28.92 E-value=39 Score=31.45 Aligned_cols=40 Identities=5% Similarity=0.081 Sum_probs=28.7
Q ss_pred CCCCeEEEEcCCCccCh----HHHHHHHHHHHhcCCCeEEEEecC
Q 043859 5 SSKPHAVLLASPGVGHV----IPVLELGKRLVTLYNFQVTIFVVA 45 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv----~P~l~La~~L~~r~Gh~Vt~~~~~ 45 (484)
|+||||+++..+..+-. .-...++++|.+. ||+|+.+...
T Consensus 1 m~~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~-g~~v~~i~~~ 44 (343)
T 1e4e_A 1 MNRIKVAILFGGCSEEHDVSVKSAIEIAANINKE-KYEPLYIGIT 44 (343)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTT-TEEEEEEEEC
T ss_pred CCCcEEEEEeCCCCCCcchhHHHHHHHHHHhhhc-CCEEEEEEEc
Confidence 35789999885433222 2567789999998 9999998754
No 218
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=28.77 E-value=1.2e+02 Score=25.48 Aligned_cols=43 Identities=12% Similarity=0.058 Sum_probs=28.8
Q ss_pred ecCCcchh-hhccCCCccccccccCchhHHHH---H------hcCCceeeccc
Q 043859 348 VPQWAPQI-DILSHPSVGGFLSHCGWNSTLES---I------TNGVPMIVWPL 390 (484)
Q Consensus 348 v~~~ipq~-~vL~~~~~~~~ItHgG~gs~~ea---l------~~GvP~v~~P~ 390 (484)
+....+.. .++...+...++--||.||.-|. + .+++|++.+-.
T Consensus 83 ~~~~~~~Rk~~~~~~sda~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll~~ 135 (191)
T 1t35_A 83 EVNGMHERKAKMSELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNV 135 (191)
T ss_dssp EESHHHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECG
T ss_pred cCCCHHHHHHHHHHHCCEEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEecC
Confidence 33555543 34443333588889999998765 5 38899999964
No 219
>3e2i_A Thymidine kinase; Zn-binding, ATP-binding, DNA synthesis, nucleotide-B transferase; HET: MSE; 2.01A {Staphylococcus aureus}
Probab=28.75 E-value=1.6e+02 Score=25.38 Aligned_cols=37 Identities=14% Similarity=0.072 Sum_probs=30.4
Q ss_pred eEEEEcCC-CccChHHHHHHHHHHHhcCCCeEEEEecCC
Q 043859 9 HAVLLASP-GVGHVIPVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 9 ~il~~~~p-~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
.|-+++.+ +.|=..-++.++..+..+ |.+|.++.+.-
T Consensus 29 ~I~vitG~M~sGKTT~Llr~~~r~~~~-g~kvli~kp~~ 66 (219)
T 3e2i_A 29 WIECITGSMFSGKSEELIRRLRRGIYA-KQKVVVFKPAI 66 (219)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHHHT-TCCEEEEEEC-
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHc-CCceEEEEecc
Confidence 56666665 889888899999999999 89998888764
No 220
>2xed_A Putative maleate isomerase; nicotinic acid catabolism, cofactor-independent CIS-trans isomerase; 1.95A {Nocardia farcinica} PDB: 2xec_A
Probab=28.73 E-value=1.4e+02 Score=26.75 Aligned_cols=97 Identities=14% Similarity=0.114 Sum_probs=50.7
Q ss_pred HHHHHHHHHhcCC-CeEEEEecCCCc-hhHHHHHhhhccCCCceEEEecCCCCCCCCCCCCchHHHHHHHHHHHhhHHHH
Q 043859 24 VLELGKRLVTLYN-FQVTIFVVASQT-SAAESKILQSAMSSKLCHVIEIPAPDISGLVDPDAAVVTIISVIMREIKPAFR 101 (484)
Q Consensus 24 ~l~La~~L~~r~G-h~Vt~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 101 (484)
..+++..++.. | .+|-++++.... ....+..++..+ +++.........+ .. .+. +...+.+.
T Consensus 134 ~~A~~~al~~~-g~~rvgvltp~~~~~~~~~~~~l~~~G----i~v~~~~~~~~~~------~~--~~g---~~~~~~l~ 197 (273)
T 2xed_A 134 AGALVEGLRAL-DAQRVALVTPYMRPLAEKVVAYLEAEG----FTISDWRALEVAD------NT--EVG---CIPGEQVM 197 (273)
T ss_dssp HHHHHHHHHHT-TCCEEEEEECSCHHHHHHHHHHHHHTT----CEEEEEEECCCCB------HH--HHH---TCCHHHHH
T ss_pred HHHHHHHHHHc-CCCeEEEEcCChhhhHHHHHHHHHHCC----CEEeccccCCCcc------ch--hhc---ccCHHHHH
Confidence 35556677666 6 688888754432 223445556666 5554333221111 01 011 11123455
Q ss_pred HHHHhc-CCCCeEEEeC-CchhhH----HHHHHHhCCCeEE
Q 043859 102 SAISAL-KTTPTALIVD-LFGTES----LAIAEELQIPKYV 136 (484)
Q Consensus 102 ~~l~~~-~~~pD~VI~D-~~~~~~----~~~A~~lgIP~v~ 136 (484)
+.++++ ....|+||.. ...+.. ..+.+.+|+|++.
T Consensus 198 ~~~~~l~~~gadaIvLg~CT~l~~~~~~~~le~~lg~PVid 238 (273)
T 2xed_A 198 AAARSLDLSEVDALVISCAVQMPSLPLVETAEREFGIPVLS 238 (273)
T ss_dssp HHHHHSCCTTCSEEEEESSSSSCCTTHHHHHHHHHSSCEEE
T ss_pred HHHHHHhhCCCCEEEEcCCCCcchHHhHHHHHHHhCCCEEc
Confidence 666666 3479999988 443332 2355678999653
No 221
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=28.72 E-value=41 Score=30.14 Aligned_cols=53 Identities=9% Similarity=-0.068 Sum_probs=41.3
Q ss_pred CCCeEEEEcCCCccChHHHHHHHHH--------HHhcCCCeEEEEecCCCchhHHHHHhhh
Q 043859 6 SKPHAVLLASPGVGHVIPVLELGKR--------LVTLYNFQVTIFVVASQTSAAESKILQS 58 (484)
Q Consensus 6 ~~~~il~~~~p~~GHv~P~l~La~~--------L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~ 58 (484)
++.+|++.+.++..|-....-++.. |....|++|+++......+.+.+...+.
T Consensus 119 ~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp~e~iv~aa~e~ 179 (262)
T 1xrs_B 119 RKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDFIKKAVEL 179 (262)
T ss_dssp SCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHHHHHHHHHT
T ss_pred CCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCCCHHHHHHHHHHc
Confidence 4679999999999999999888876 7654279999999876666555554443
No 222
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=28.36 E-value=90 Score=30.36 Aligned_cols=45 Identities=13% Similarity=0.231 Sum_probs=38.5
Q ss_pred CCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchhHH
Q 043859 7 KPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAE 52 (484)
Q Consensus 7 ~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~ 52 (484)
+..|+++..++.|-..-+..||..|+++ |++|.++..+.++....
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~~-G~kVllv~~D~~R~aa~ 144 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQKR-GYKVGVVCSDTWRPGAY 144 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTT-TCCEEEEECCCSSTHHH
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHHC-CCeEEEEeCCCcchhHH
Confidence 4567777778999999999999999999 99999999988875433
No 223
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=28.35 E-value=31 Score=30.96 Aligned_cols=36 Identities=25% Similarity=0.290 Sum_probs=26.0
Q ss_pred CCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCC
Q 043859 5 SSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
|+.|+|+++- + |-+- ..|++.|.++ ||+|+.++-..
T Consensus 1 M~~~~ilVtG--a-G~iG--~~l~~~L~~~-g~~V~~~~r~~ 36 (286)
T 3gpi_A 1 MSLSKILIAG--C-GDLG--LELARRLTAQ-GHEVTGLRRSA 36 (286)
T ss_dssp -CCCCEEEEC--C-SHHH--HHHHHHHHHT-TCCEEEEECTT
T ss_pred CCCCcEEEEC--C-CHHH--HHHHHHHHHC-CCEEEEEeCCc
Confidence 3457887773 4 7443 4688999999 99999987653
No 224
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=28.15 E-value=2.1e+02 Score=23.65 Aligned_cols=144 Identities=12% Similarity=0.106 Sum_probs=72.5
Q ss_pred eEEEEecCCCCCCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCCCCCCcccCCCCCCCCCccCCCchhHHHhhcCCceEec
Q 043859 270 SVLYVSFGSGGTLTYEQITELAWGLELSQQRFIWVVRLPNETTGDGSFFTAGSGAGDDDLSSLLPDGFLSRTLDIGVVVP 349 (484)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~ 349 (484)
+.|-|-+||. .+....+++...++..|..+=..+.. ....|+.+.
T Consensus 8 ~~V~IimgS~--SD~~v~~~a~~~L~~~gi~~ev~V~S----------------------aHR~p~~~~----------- 52 (174)
T 3lp6_A 8 PRVGVIMGSD--SDWPVMADAAAALAEFDIPAEVRVVS----------------------AHRTPEAMF----------- 52 (174)
T ss_dssp CSEEEEESCG--GGHHHHHHHHHHHHHTTCCEEEEECC----------------------TTTCHHHHH-----------
T ss_pred CeEEEEECcH--HhHHHHHHHHHHHHHcCCCEEEEEEC----------------------CCCCHHHHH-----------
Confidence 3455555653 35566888888888888876555421 244555333
Q ss_pred CCcchhhhccCCCccccccccCch----hHHHHHhcCCceeeccccccc-chhHHHH-HhhhcceEEeeecCCCCccCHH
Q 043859 350 QWAPQIDILSHPSVGGFLSHCGWN----STLESITNGVPMIVWPLYSEQ-RMNATIL-TEELGVAIRSKVLPSKGVVGRE 423 (484)
Q Consensus 350 ~~ipq~~vL~~~~~~~~ItHgG~g----s~~eal~~GvP~v~~P~~~DQ-~~na~rv-~~~~G~g~~l~~~~~~~~~~~~ 423 (484)
+|+...+ -...+ ++|.-+|.- ++.-++ .-+|+|.+|...-. ......+ .-+.=-|+.+.+...+...++.
T Consensus 53 ~~~~~a~-~~g~~--ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlS~vqmp~GvpVatV~I~~~~nAa 128 (174)
T 3lp6_A 53 SYARGAA-ARGLE--VIIAGAGGAAHLPGMVAAA-TPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIGGAGNAG 128 (174)
T ss_dssp HHHHHHH-HHTCC--EEEEEEESSCCHHHHHHHH-CSSCEEEEEECCSSGGGHHHHHHHHCCCTTCCCEECCTTCHHHHH
T ss_pred HHHHHHH-hCCCC--EEEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCeeEEEEcCcchHHH
Confidence 2221111 01223 566666643 444443 56899999975321 1111111 0133222222211122344555
Q ss_pred HHHHHHHHHhcccchHHHHHHHHHHHHHHHHhh
Q 043859 424 EIKTMVRRILVDEEGYEIRAKVKELQRSAQKAW 456 (484)
Q Consensus 424 ~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~ 456 (484)
.++..|.. +.|+. ++++.+.+++..++.+
T Consensus 129 ~lAa~Il~-~~d~~---l~~kl~~~r~~~~~~v 157 (174)
T 3lp6_A 129 LLAVRMLG-AANPQ---LRARIVAFQDRLADVV 157 (174)
T ss_dssp HHHHHHHH-TTCHH---HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHh-CCCHH---HHHHHHHHHHHHHHHH
Confidence 55544432 34555 8888888888866444
No 225
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=28.13 E-value=57 Score=30.22 Aligned_cols=36 Identities=22% Similarity=0.165 Sum_probs=23.7
Q ss_pred HHHHhcCCCCeEEEeCCchhhHHHHHHHhCCCeEEEec
Q 043859 102 SAISALKTTPTALIVDLFGTESLAIAEELQIPKYVYVG 139 (484)
Q Consensus 102 ~~l~~~~~~pD~VI~D~~~~~~~~~A~~lgIP~v~~~~ 139 (484)
+.+..+ +||+||..........--++.|||++.+..
T Consensus 110 E~i~al--~PDLIi~~~~~~~~~~~L~~~gipvv~~~~ 145 (335)
T 4hn9_A 110 EACVAA--TPDVVFLPMKLKKTADTLESLGIKAVVVNP 145 (335)
T ss_dssp HHHHHT--CCSEEEEEGGGHHHHHHHHHTTCCEEEECC
T ss_pred HHHHhc--CCCEEEEeCcchhHHHHHHHcCCCEEEEcC
Confidence 334457 999999875433333344678999888753
No 226
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=27.85 E-value=34 Score=34.03 Aligned_cols=36 Identities=28% Similarity=0.350 Sum_probs=28.8
Q ss_pred CCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCC
Q 043859 5 SSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
..|.||||+-.+.-| +.+|+.|.++ |++||++...+
T Consensus 40 ~~KprVVIIGgG~AG-----l~~A~~L~~~-~~~VtLId~~~ 75 (502)
T 4g6h_A 40 SDKPNVLILGSGWGA-----ISFLKHIDTK-KYNVSIISPRS 75 (502)
T ss_dssp CSSCEEEEECSSHHH-----HHHHHHSCTT-TCEEEEEESSS
T ss_pred CCCCCEEEECCcHHH-----HHHHHHhhhC-CCcEEEECCCC
Confidence 346799999876555 5789999988 89999998764
No 227
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=27.74 E-value=55 Score=27.24 Aligned_cols=34 Identities=18% Similarity=0.251 Sum_probs=24.6
Q ss_pred CCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecC
Q 043859 7 KPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVA 45 (484)
Q Consensus 7 ~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~ 45 (484)
.|+|+++ ++.|-+ -..|++.|.++ ||+|+.++-.
T Consensus 3 ~~~ilVt--GatG~i--G~~l~~~l~~~-g~~V~~~~r~ 36 (206)
T 1hdo_A 3 VKKIAIF--GATGQT--GLTTLAQAVQA-GYEVTVLVRD 36 (206)
T ss_dssp CCEEEEE--STTSHH--HHHHHHHHHHT-TCEEEEEESC
T ss_pred CCEEEEE--cCCcHH--HHHHHHHHHHC-CCeEEEEEeC
Confidence 3677765 344433 35788999999 9999988765
No 228
>2zr9_A Protein RECA, recombinase A; recombination, RECA mutants, DNA-repair, ATP-binding, DNA DA recombination, DNA repair, DNA-binding; HET: DTP; 2.50A {Mycobacterium smegmatis str} PDB: 2zr0_A* 2zra_A* 2zrb_A 2zrm_A* 1ubc_A* 1ubf_A* 1ubg_A* 1ube_A* 2g88_A* 2odw_A* 2oe2_A 2oep_A* 2oes_A 2ofo_A 2zr7_A 2odn_A* 2zrn_A 2zro_A* 2zrp_A* 2zre_A* ...
Probab=27.28 E-value=3e+02 Score=25.54 Aligned_cols=43 Identities=5% Similarity=-0.078 Sum_probs=35.8
Q ss_pred CCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCchh
Q 043859 7 KPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSA 50 (484)
Q Consensus 7 ~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~ 50 (484)
.--+++...|+.|-..=++.++..+... |..|.|++.+...+.
T Consensus 61 G~iv~I~G~pGsGKTtLal~la~~~~~~-g~~vlyi~~E~~~~~ 103 (349)
T 2zr9_A 61 GRVIEIYGPESSGKTTVALHAVANAQAA-GGIAAFIDAEHALDP 103 (349)
T ss_dssp TSEEEEEESTTSSHHHHHHHHHHHHHHT-TCCEEEEESSCCCCH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHhC-CCeEEEEECCCCcCH
Confidence 3357777788999999999999999988 899999999875543
No 229
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=27.20 E-value=60 Score=26.67 Aligned_cols=36 Identities=14% Similarity=0.243 Sum_probs=28.6
Q ss_pred CeEEEEcCCCcc-----ChHHHHHHHHHHHhcCCCeEEEEecCC
Q 043859 8 PHAVLLASPGVG-----HVIPVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 8 ~~il~~~~p~~G-----Hv~P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
.+|+|+| ++| -.++...|++.|+++ |.+|.|..+|-
T Consensus 24 ~~ViIvP--GYGmAvAqAQ~~v~el~~~L~~~-G~~V~faIHPV 64 (180)
T 1pno_A 24 SKVIIVP--GYGMAVAQAQHALREMADVLKKE-GVEVSYAIHPV 64 (180)
T ss_dssp SEEEEEE--CHHHHHHTCHHHHHHHHHHHHHT-TCEEEEEECTT
T ss_pred CeEEEEC--ChHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeccc
Confidence 4666665 444 357889999999999 99999999994
No 230
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=27.10 E-value=42 Score=26.30 Aligned_cols=33 Identities=12% Similarity=0.084 Sum_probs=25.0
Q ss_pred CCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecC
Q 043859 7 KPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVA 45 (484)
Q Consensus 7 ~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~ 45 (484)
.+||+++-. |.+ -..+|+.|.++ ||+|+.+...
T Consensus 6 ~~~v~I~G~---G~i--G~~la~~L~~~-g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGS---EAA--GVGLVRELTAA-GKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECC---SHH--HHHHHHHHHHT-TCCEEEEESC
T ss_pred CCEEEEECC---CHH--HHHHHHHHHHC-CCeEEEEECC
Confidence 357888765 443 35789999999 9999988765
No 231
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=27.06 E-value=2.7e+02 Score=23.02 Aligned_cols=143 Identities=17% Similarity=0.153 Sum_probs=71.2
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCCCCCCcccCCCCCCCCCccCCCchhHHHhhcCCceEecC
Q 043859 271 VLYVSFGSGGTLTYEQITELAWGLELSQQRFIWVVRLPNETTGDGSFFTAGSGAGDDDLSSLLPDGFLSRTLDIGVVVPQ 350 (484)
Q Consensus 271 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~ 350 (484)
.|-|-+||. .+....+++...|+..+..+-..+.. ....|+.+.+
T Consensus 14 ~V~IimGS~--SD~~v~~~a~~~L~~~Gi~~ev~V~S----------------------aHR~p~~~~~----------- 58 (174)
T 3kuu_A 14 KIAIVMGSK--SDWATMQFAADVLTTLNVPFHVEVVS----------------------AHRTPDRLFS----------- 58 (174)
T ss_dssp CEEEEESSG--GGHHHHHHHHHHHHHTTCCEEEEECC----------------------TTTCHHHHHH-----------
T ss_pred cEEEEECcH--HHHHHHHHHHHHHHHcCCCEEEEEEc----------------------ccCCHHHHHH-----------
Confidence 355556653 35566888888888888886555522 2445553332
Q ss_pred CcchhhhccCCCccccccccCch----hHHHHHhcCCceeeccccc-ccchhHHHH-HhhhcceEEeeecCCC--CccCH
Q 043859 351 WAPQIDILSHPSVGGFLSHCGWN----STLESITNGVPMIVWPLYS-EQRMNATIL-TEELGVAIRSKVLPSK--GVVGR 422 (484)
Q Consensus 351 ~ipq~~vL~~~~~~~~ItHgG~g----s~~eal~~GvP~v~~P~~~-DQ~~na~rv-~~~~G~g~~l~~~~~~--~~~~~ 422 (484)
|+...+ -...+ ++|.-+|.- ++.-++ .-+|+|.+|... +-......+ .-+.--|+.+-+...+ ...++
T Consensus 59 ~~~~a~-~~g~~--ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmP~GvPVatV~I~~a~~~nA 134 (174)
T 3kuu_A 59 FAEQAE-ANGLH--VIIAGNGGAAHLPGMLAAK-TLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANA 134 (174)
T ss_dssp HHHHTT-TTTCS--EEEEEEESSCCHHHHHHHT-CSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSSHHHHHHH
T ss_pred HHHHHH-hCCCc--EEEEECChhhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHhhhCCCCCeeEEEEeCCccchHH
Confidence 111110 01222 577666643 344333 358999999853 221222222 1133223222211111 12234
Q ss_pred HHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhh
Q 043859 423 EEIKTMVRRILVDEEGYEIRAKVKELQRSAQKAW 456 (484)
Q Consensus 423 ~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~ 456 (484)
..++..|. -+.|+. .+++.+.+++..++.+
T Consensus 135 a~lAa~IL-a~~d~~---l~~kl~~~r~~~~~~v 164 (174)
T 3kuu_A 135 ALLAAQIL-ALHDTE---LAGRLAHWRQSQTDDV 164 (174)
T ss_dssp HHHHHHHH-HTTCHH---HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-cCCCHH---HHHHHHHHHHHHHHHH
Confidence 44443332 234555 8888888888876555
No 232
>3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis}
Probab=27.04 E-value=3.8e+02 Score=25.74 Aligned_cols=36 Identities=6% Similarity=0.034 Sum_probs=23.9
Q ss_pred CCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecC
Q 043859 5 SSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVA 45 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~ 45 (484)
+.+|||+++-.++.. .+||+.|.+..|....++.+.
T Consensus 19 p~~m~ilvlG~ggre-----~ala~~l~~s~~v~~v~~~pg 54 (442)
T 3lp8_A 19 PGSMNVLVIGSGGRE-----HSMLHHIRKSTLLNKLFIAPG 54 (442)
T ss_dssp -CCEEEEEEECSHHH-----HHHHHHHTTCTTEEEEEEEEC
T ss_pred CCCCEEEEECCChHH-----HHHHHHHHhCCCCCEEEEECC
Confidence 446899999777544 468999987734455555543
No 233
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=26.85 E-value=1e+02 Score=27.45 Aligned_cols=40 Identities=8% Similarity=0.031 Sum_probs=29.8
Q ss_pred HHHHHHHHhcCCCCeEEEeCCchh------hHHHHHHHhCCCeEEEec
Q 043859 98 PAFRSAISALKTTPTALIVDLFGT------ESLAIAEELQIPKYVYVG 139 (484)
Q Consensus 98 ~~l~~~l~~~~~~pD~VI~D~~~~------~~~~~A~~lgIP~v~~~~ 139 (484)
..+.+++++. .||+||+-.... -+..+|.+||+|.++..+
T Consensus 106 ~~La~~i~~~--~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~ 151 (255)
T 1efv_B 106 RVLAKLAEKE--KVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFAS 151 (255)
T ss_dssp HHHHHHHHHH--TCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHhc--CCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceE
Confidence 3455566666 899999875443 466899999999998654
No 234
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=26.74 E-value=2.1e+02 Score=24.02 Aligned_cols=93 Identities=9% Similarity=-0.066 Sum_probs=0.0
Q ss_pred CeEEEEecCCCCCCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCCCCCCcccCCCCCCCCCccCCCchhHHHhhcCCceEe
Q 043859 269 ESVLYVSFGSGGTLTYEQITELAWGLELSQQRFIWVVRLPNETTGDGSFFTAGSGAGDDDLSSLLPDGFLSRTLDIGVVV 348 (484)
Q Consensus 269 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v 348 (484)
+...+|+.|... ....+..++....+-+++=++...... .+.....+.. .+.+
T Consensus 43 ~g~~lv~GGG~~----GlM~a~~~ga~~~GG~viGv~p~~l~~--------------~e~~~~~~~~---------~i~~ 95 (189)
T 3sbx_A 43 RGWTLVWGGGHV----SAMGAVSSAARAHGGWTVGVIPKMLVH--------------RELADHDADE---------LVVT 95 (189)
T ss_dssp TTCEEEECCBCS----HHHHHHHHHHHTTTCCEEEEEETTTTT--------------TTTBCTTCSE---------EEEE
T ss_pred CCCEEEECCCcc----CHHHHHHHHHHHcCCcEEEEcCchhhh--------------cccCCCCCCe---------eEEc
Q ss_pred cCCcchhhhccCCCccccccccCchhHHHHH---------hcCCceeec
Q 043859 349 PQWAPQIDILSHPSVGGFLSHCGWNSTLESI---------TNGVPMIVW 388 (484)
Q Consensus 349 ~~~ipq~~vL~~~~~~~~ItHgG~gs~~eal---------~~GvP~v~~ 388 (484)
..+..-...+-..+...++--||.||.-|.. .+++|++.+
T Consensus 96 ~~~~~Rk~~m~~~sda~IalPGG~GTLdElfe~lt~~qlg~~~kPvvll 144 (189)
T 3sbx_A 96 ETMWERKQVMEDRANAFITLPGGVGTLDELLDVWTEGYLGMHDKSIVVL 144 (189)
T ss_dssp SSHHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEE
T ss_pred CCHHHHHHHHHHHCCEEEEeCCCcchHHHHHHHHHHHHhcccCCCEEEe
No 235
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=26.57 E-value=62 Score=26.68 Aligned_cols=36 Identities=17% Similarity=0.183 Sum_probs=28.5
Q ss_pred CeEEEEcCCCcc-----ChHHHHHHHHHHHhcCCCeEEEEecCC
Q 043859 8 PHAVLLASPGVG-----HVIPVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 8 ~~il~~~~p~~G-----Hv~P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
.+|+|+|. +| -.++...|++.|+++ |.+|.|..+|-
T Consensus 23 ~~ViIvPG--YGmAvAqAQ~~v~el~~~L~~~-G~~V~faIHPV 63 (184)
T 1d4o_A 23 NSIIITPG--YGLCAAKAQYPIADLVKMLSEQ-GKKVRFGIHPV 63 (184)
T ss_dssp SEEEEEEC--HHHHHTTTHHHHHHHHHHHHHT-TCEEEEEECTT
T ss_pred CeEEEECC--hHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeccc
Confidence 36666653 43 357889999999999 99999999994
No 236
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=26.41 E-value=55 Score=25.70 Aligned_cols=34 Identities=24% Similarity=0.394 Sum_probs=27.6
Q ss_pred CCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCC
Q 043859 7 KPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 7 ~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
+.||+++-.+..| ..+|+.|.++ ||+|+.+...+
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~-g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLAS-DIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHT-TCCEEEEESCH
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHC-CCCEEEEECCH
Confidence 5689998776555 4789999999 99999998774
No 237
>4edh_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology; HET: TMP ADP; 1.32A {Pseudomonas aeruginosa PAO1} PDB: 4e5u_A* 4esh_A* 4gmd_A* 3uwk_A* 3uwo_A* 3uxm_A*
Probab=26.22 E-value=3e+02 Score=23.33 Aligned_cols=41 Identities=17% Similarity=0.130 Sum_probs=34.1
Q ss_pred CCCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecC
Q 043859 4 SSSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVA 45 (484)
Q Consensus 4 ~~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~ 45 (484)
.|+.+-|+|.-.++.|--.-.-.|++.|..+ |+.|.....+
T Consensus 3 ~m~g~~i~~eG~~gsGKsT~~~~l~~~l~~~-~~~v~~~~~p 43 (213)
T 4edh_A 3 AMTGLFVTLEGPEGAGKSTNRDYLAERLRER-GIEVQLTREP 43 (213)
T ss_dssp --CCEEEEEECSTTSSHHHHHHHHHHHHHTT-TCCEEEEESS
T ss_pred CCCceEEEEEcCCCCCHHHHHHHHHHHHHHc-CCCcccccCC
Confidence 3677889999999999999999999999999 9999755544
No 238
>2zkq_b 40S ribosomal protein SA; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=26.15 E-value=1.8e+02 Score=26.36 Aligned_cols=33 Identities=21% Similarity=0.356 Sum_probs=23.9
Q ss_pred CCeEEE-eCCch-hhHHHHHHHhCCCeEEEecccH
Q 043859 110 TPTALI-VDLFG-TESLAIAEELQIPKYVYVGTNA 142 (484)
Q Consensus 110 ~pD~VI-~D~~~-~~~~~~A~~lgIP~v~~~~~~~ 142 (484)
.||+|| .|+.. .-+..=|.++|||+|.++-+++
T Consensus 118 ~PdlliV~Dp~~e~~AI~EA~~lgIPvIalvDTn~ 152 (295)
T 2zkq_b 118 EPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDS 152 (295)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHHTCCEEEEECTTC
T ss_pred CCCeEEEeCCCcchhHHHHHHHhCCCEEEEecCCC
Confidence 688876 67643 3455678899999999876553
No 239
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=25.98 E-value=17 Score=19.05 Aligned_cols=17 Identities=29% Similarity=0.735 Sum_probs=14.1
Q ss_pred CchhHHHHHhcCCceee
Q 043859 371 GWNSTLESITNGVPMIV 387 (484)
Q Consensus 371 G~gs~~eal~~GvP~v~ 387 (484)
|.|+++..|+.|.|.++
T Consensus 1 giGa~LKVLa~~LP~li 17 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALI 17 (26)
T ss_pred CchHHHHHHHccchHHH
Confidence 67888889999988765
No 240
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=25.61 E-value=47 Score=30.20 Aligned_cols=33 Identities=18% Similarity=0.103 Sum_probs=25.7
Q ss_pred CCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecC
Q 043859 7 KPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVA 45 (484)
Q Consensus 7 ~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~ 45 (484)
.|+|+|+-.+..| ..+|..|.++ ||+|+++...
T Consensus 3 ~m~i~iiG~G~~G-----~~~a~~l~~~-g~~V~~~~r~ 35 (316)
T 2ew2_A 3 AMKIAIAGAGAMG-----SRLGIMLHQG-GNDVTLIDQW 35 (316)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHT-TCEEEEECSC
T ss_pred CCeEEEECcCHHH-----HHHHHHHHhC-CCcEEEEECC
Confidence 4799999776666 4578999999 9999988654
No 241
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=25.60 E-value=63 Score=30.10 Aligned_cols=33 Identities=21% Similarity=0.370 Sum_probs=22.0
Q ss_pred HHhcCCCCeEEEeCCchhhHH-HHHHHhCCCeEEEe
Q 043859 104 ISALKTTPTALIVDLFGTESL-AIAEELQIPKYVYV 138 (484)
Q Consensus 104 l~~~~~~pD~VI~D~~~~~~~-~~A~~lgIP~v~~~ 138 (484)
+.++ +||+||......... ...+.+|||++.+.
T Consensus 92 Ilal--~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~ 125 (346)
T 2etv_A 92 LITL--QPDVVFITYVDRXTAXDIQEXTGIPVVVLS 125 (346)
T ss_dssp HHHH--CCSEEEEESCCHHHHHHHHHHHTSCEEEEC
T ss_pred HhcC--CCCEEEEeCCccchHHHHHHhcCCcEEEEe
Confidence 3346 999999865432222 35677899988864
No 242
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=25.48 E-value=40 Score=31.74 Aligned_cols=40 Identities=8% Similarity=0.128 Sum_probs=28.3
Q ss_pred CCCCeEEEEcCCCccCh----HHHHHHHHHHHhcCCCeEEEEecC
Q 043859 5 SSKPHAVLLASPGVGHV----IPVLELGKRLVTLYNFQVTIFVVA 45 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv----~P~l~La~~L~~r~Gh~Vt~~~~~ 45 (484)
|+||||+++..+-.+-. .-...++++|.++ ||+|+.+...
T Consensus 1 m~~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~-g~~v~~i~~~ 44 (364)
T 2i87_A 1 MTKENICIVFGGKSAEHEVSILTAQNVLNAIDKD-KYHVDIIYIT 44 (364)
T ss_dssp --CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTT-TEEEEEEEEC
T ss_pred CCCcEEEEEECCCCccchhHHHHHHHHHHHHhhc-CCEEEEEEEc
Confidence 35789999986533322 3447789999998 9999988755
No 243
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=25.33 E-value=1.2e+02 Score=26.74 Aligned_cols=37 Identities=16% Similarity=0.137 Sum_probs=26.9
Q ss_pred CeEEEEcCCCcc-----------ChHHHHHHHHHHHhcCCCeEEEEecC
Q 043859 8 PHAVLLASPGVG-----------HVIPVLELGKRLVTLYNFQVTIFVVA 45 (484)
Q Consensus 8 ~~il~~~~p~~G-----------Hv~P~l~La~~L~~r~Gh~Vt~~~~~ 45 (484)
+||+++-....+ +..=++.-...|++. |++|+++++.
T Consensus 10 kkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~a-G~~V~~aSp~ 57 (247)
T 3n7t_A 10 RKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAA-GFEVDVASET 57 (247)
T ss_dssp SEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred CeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 467777655321 255577778899998 9999999975
No 244
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=25.31 E-value=2.8e+02 Score=22.64 Aligned_cols=143 Identities=13% Similarity=0.118 Sum_probs=70.2
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCCCCCCcccCCCCCCCCCccCCCchhHHHhhcCCceEecC
Q 043859 271 VLYVSFGSGGTLTYEQITELAWGLELSQQRFIWVVRLPNETTGDGSFFTAGSGAGDDDLSSLLPDGFLSRTLDIGVVVPQ 350 (484)
Q Consensus 271 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~ 350 (484)
.|-|-+||. .+....+++...++..|..+=..+.. ....|+.+.+
T Consensus 5 ~V~Iimgs~--SD~~v~~~a~~~l~~~gi~~ev~V~S----------------------aHR~p~~~~~----------- 49 (163)
T 3ors_A 5 KVAVIMGSS--SDWKIMQESCNMLDYFEIPYEKQVVS----------------------AHRTPKMMVQ----------- 49 (163)
T ss_dssp CEEEEESCG--GGHHHHHHHHHHHHHTTCCEEEEECC----------------------TTTSHHHHHH-----------
T ss_pred eEEEEECcH--HHHHHHHHHHHHHHHcCCCEEEEEEC----------------------CcCCHHHHHH-----------
Confidence 355555653 35566888888888888876554421 2445553332
Q ss_pred CcchhhhccCCCccccccccCch----hHHHHHhcCCceeecccccccc-hhHHHH-HhhhcceEEeeecCCC--CccCH
Q 043859 351 WAPQIDILSHPSVGGFLSHCGWN----STLESITNGVPMIVWPLYSEQR-MNATIL-TEELGVAIRSKVLPSK--GVVGR 422 (484)
Q Consensus 351 ~ipq~~vL~~~~~~~~ItHgG~g----s~~eal~~GvP~v~~P~~~DQ~-~na~rv-~~~~G~g~~l~~~~~~--~~~~~ 422 (484)
|+.... -...+ ++|.=+|.- ++.-++ .-+|+|.+|....-. .....+ .-+.--|+.+-+...+ ...++
T Consensus 50 ~~~~a~-~~g~~--ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I~~a~~~nA 125 (163)
T 3ors_A 50 FASEAR-ERGIN--IIIAGAGGAAHLPGMVASL-TTLPVIGVPIETKSLKGIDSLLSIVQMPGGIPVATTAIGAAGAKNA 125 (163)
T ss_dssp HHHHTT-TTTCC--EEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSTHHHHHHH
T ss_pred HHHHHH-hCCCc--EEEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCceEEEEcCCcccHHH
Confidence 111110 01122 577666643 444443 568999999754311 111111 1133333322211111 12334
Q ss_pred HHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhh
Q 043859 423 EEIKTMVRRILVDEEGYEIRAKVKELQRSAQKAW 456 (484)
Q Consensus 423 ~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~ 456 (484)
..++..|.. +.|+. ++++.+.+++..++.+
T Consensus 126 a~lAa~Il~-~~d~~---l~~kl~~~r~~~~~~v 155 (163)
T 3ors_A 126 GILAARMLS-IQNPS---LVEKLNQYESSLIQKV 155 (163)
T ss_dssp HHHHHHHHH-TTCTH---HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh-CCCHH---HHHHHHHHHHHHHHHH
Confidence 444433322 34555 8888888888765433
No 245
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=25.23 E-value=2.2e+02 Score=27.27 Aligned_cols=32 Identities=9% Similarity=0.114 Sum_probs=22.4
Q ss_pred CCeEEEEcCCCccChHHHHHHHHHHHhcCCC-eEEEEec
Q 043859 7 KPHAVLLASPGVGHVIPVLELGKRLVTLYNF-QVTIFVV 44 (484)
Q Consensus 7 ~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh-~Vt~~~~ 44 (484)
.|||+++-.++.- .+||+.|.+. +. .-+++.+
T Consensus 3 ~mkvlviG~ggre-----~ala~~l~~s-~~v~~v~~~p 35 (431)
T 3mjf_A 3 AMNILIIGNGGRE-----HALGWKAAQS-PLADKIYVAP 35 (431)
T ss_dssp CEEEEEEECSHHH-----HHHHHHHTTC-TTEEEEEEEE
T ss_pred CcEEEEECCCHHH-----HHHHHHHHhC-CCCCEEEEEC
Confidence 4899999877654 4789999887 54 4444443
No 246
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=25.22 E-value=36 Score=30.97 Aligned_cols=41 Identities=22% Similarity=0.279 Sum_probs=25.2
Q ss_pred CCCCCCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCC
Q 043859 1 MESSSSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 1 m~~~~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
|.+....|+|+++- +.|.+- ..|++.|.++ ||+|+.++-..
T Consensus 1 M~~~~~~~~vlVtG--atG~iG--~~l~~~L~~~-g~~V~~~~r~~ 41 (321)
T 3vps_A 1 MQRNTLKHRILITG--GAGFIG--GHLARALVAS-GEEVTVLDDLR 41 (321)
T ss_dssp ------CCEEEEET--TTSHHH--HHHHHHHHHT-TCCEEEECCCS
T ss_pred CCcccCCCeEEEEC--CCChHH--HHHHHHHHHC-CCEEEEEecCC
Confidence 55545567777664 444443 4789999999 99999887553
No 247
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=24.89 E-value=59 Score=29.75 Aligned_cols=33 Identities=12% Similarity=0.142 Sum_probs=27.2
Q ss_pred CeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCC
Q 043859 8 PHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 8 ~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
|||+++-.++.|- .+|..|.+. ||+|+++....
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~-g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQRS-GEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHHT-SCCEEEECSTT
T ss_pred CEEEEECcCHHHH-----HHHHHHHHC-CCeEEEEEcCc
Confidence 7899998888884 568899998 99999998764
No 248
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=24.86 E-value=1.3e+02 Score=22.77 Aligned_cols=40 Identities=15% Similarity=0.155 Sum_probs=31.0
Q ss_pred CCCCeEEEEcCCCccChH-HHHHHHHHHHhcCCCeEEEEecC
Q 043859 5 SSKPHAVLLASPGVGHVI-PVLELGKRLVTLYNFQVTIFVVA 45 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~-P~l~La~~L~~r~Gh~Vt~~~~~ 45 (484)
.+++||+++|..|.|.-. =...|-+.+.+. |.++.+-...
T Consensus 19 ~~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~-gi~~~V~~~~ 59 (113)
T 1tvm_A 19 GSKRKIIVACGGAVATSTMAAEEIKELCQSH-NIPVELIQCR 59 (113)
T ss_dssp CSSEEEEEESCSCSSHHHHHHHHHHHHHHHT-TCCEEEEEEC
T ss_pred ccccEEEEECCCCHHHHHHHHHHHHHHHHHc-CCeEEEEEec
Confidence 445789999999999977 467788888888 8987554443
No 249
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=24.53 E-value=53 Score=27.86 Aligned_cols=40 Identities=8% Similarity=-0.066 Sum_probs=28.4
Q ss_pred HHHHHHHhc-CCCCeEEEeCCchhhHHHHHHHhCCCeEEEeccc
Q 043859 99 AFRSAISAL-KTTPTALIVDLFGTESLAIAEELQIPKYVYVGTN 141 (484)
Q Consensus 99 ~l~~~l~~~-~~~pD~VI~D~~~~~~~~~A~~lgIP~v~~~~~~ 141 (484)
+++..++++ ..+.|+||.|.. ...+|+++|+|.+.+.+..
T Consensus 130 e~~~~i~~l~~~G~~vvVG~~~---~~~~A~~~Gl~~vli~sg~ 170 (196)
T 2q5c_A 130 EITTLISKVKTENIKIVVSGKT---VTDEAIKQGLYGETINSGE 170 (196)
T ss_dssp GHHHHHHHHHHTTCCEEEECHH---HHHHHHHTTCEEEECCCCH
T ss_pred HHHHHHHHHHHCCCeEEECCHH---HHHHHHHcCCcEEEEecCH
Confidence 334444444 349999999832 4689999999988877543
No 250
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=24.45 E-value=69 Score=26.93 Aligned_cols=36 Identities=11% Similarity=0.186 Sum_probs=28.3
Q ss_pred CeEEEEcCCCcc-----ChHHHHHHHHHHHhcCCCeEEEEecCC
Q 043859 8 PHAVLLASPGVG-----HVIPVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 8 ~~il~~~~p~~G-----Hv~P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
.+|+|+|. +| -.++...|++.|+++ |.+|.|..+|-
T Consensus 47 ~~ViIVPG--YGmAVAqAQ~~v~el~~~L~~~-G~~V~faIHPV 87 (203)
T 2fsv_C 47 SKVIIVPG--YGMAVAQAQHALREMADVLKKE-GVEVSYAIHPV 87 (203)
T ss_dssp SEEEEEEC--HHHHHHTCHHHHHHHHHHHHHT-TCEEEEEECTT
T ss_pred CcEEEEcC--chHhHHHHHHHHHHHHHHHHHc-CCeEEEEeccc
Confidence 36666653 43 356889999999999 99999999994
No 251
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=24.15 E-value=57 Score=29.17 Aligned_cols=33 Identities=12% Similarity=0.087 Sum_probs=25.9
Q ss_pred CeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCC
Q 043859 8 PHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 8 ~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
|||.|+-.+..| ..+|..|.++ ||+|+++....
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~-g~~V~~~~r~~ 33 (291)
T 1ks9_A 1 MKITVLGCGALG-----QLWLTALCKQ-GHEVQGWLRVP 33 (291)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHT-TCEEEEECSSC
T ss_pred CeEEEECcCHHH-----HHHHHHHHhC-CCCEEEEEcCc
Confidence 688888776666 3788999999 99999986553
No 252
>3p32_A Probable GTPase RV1496/MT1543; structural genomics, seattle structural genomics center for infectious disease, ssgcid, MEAB, MMAA; HET: GDP PGE; 1.90A {Mycobacterium tuberculosis} PDB: 3md0_A* 4gt1_A* 3nxs_A* 3tk1_A*
Probab=23.96 E-value=4.3e+02 Score=24.35 Aligned_cols=42 Identities=21% Similarity=0.417 Sum_probs=35.5
Q ss_pred CCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCCCc
Q 043859 6 SKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQT 48 (484)
Q Consensus 6 ~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~ 48 (484)
+..+|+|+..|+.|=-.=+..|+..|..+ |++|.++...+..
T Consensus 78 ~~~~I~i~G~~G~GKSTl~~~L~~~l~~~-g~kV~vi~~Dp~~ 119 (355)
T 3p32_A 78 NAHRVGITGVPGVGKSTAIEALGMHLIER-GHRVAVLAVDPSS 119 (355)
T ss_dssp CSEEEEEECCTTSSHHHHHHHHHHHHHTT-TCCEEEEEEC---
T ss_pred CceEEEEECCCCCCHHHHHHHHHHHHHhC-CCceEEEecCCCC
Confidence 45688999999999999999999999999 9999999887544
No 253
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=23.88 E-value=72 Score=26.92 Aligned_cols=36 Identities=19% Similarity=0.250 Sum_probs=28.4
Q ss_pred CeEEEEcCCCcc-----ChHHHHHHHHHHHhcCCCeEEEEecCC
Q 043859 8 PHAVLLASPGVG-----HVIPVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 8 ~~il~~~~p~~G-----Hv~P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
.+|+|+| ++| -.++...|++.|+++ |.+|.|..+|-
T Consensus 46 ~~ViIVP--GYGmAVAqAQ~~v~el~~~L~~~-G~~V~faIHPV 86 (207)
T 1djl_A 46 NSIIITP--GYGLCAAKAQYPIADLVKMLTEQ-GKKVRFGIHPV 86 (207)
T ss_dssp SEEEEEE--CHHHHHHTCHHHHHHHHHHHHHT-TCEEEEEECTT
T ss_pred CeEEEEC--CchHHHHHHhHHHHHHHHHHHHC-CCeEEEEeCcc
Confidence 3666665 343 357889999999999 99999999994
No 254
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=23.69 E-value=68 Score=26.45 Aligned_cols=36 Identities=19% Similarity=0.313 Sum_probs=28.7
Q ss_pred CeEEEEcCCCcc-----ChHHHHHHHHHHHhcCCCeEEEEecCC
Q 043859 8 PHAVLLASPGVG-----HVIPVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 8 ~~il~~~~p~~G-----Hv~P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
.+|+|+| ++| -.++...|++.|+++ |.+|.|..+|-
T Consensus 31 ~~ViIVP--GYGmAVAqAQ~~v~el~~~L~~~-G~~V~faIHPV 71 (186)
T 2bru_C 31 HSVIITP--GYGMAVAQAQYPVAEITEKLRAR-GINVRFGIHPV 71 (186)
T ss_dssp SEEEEEC--SBHHHHTTTHHHHHHHHHHHHHH-CCEEEEEECSS
T ss_pred CeEEEEC--ChHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeccc
Confidence 3666665 444 357889999999999 99999999994
No 255
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=23.63 E-value=92 Score=25.39 Aligned_cols=48 Identities=13% Similarity=0.249 Sum_probs=34.0
Q ss_pred HHHHHhhHHHHHHHHhcCCCCeEEEeCCchh--------------hH-HHHHHHhCCCeEEEecc
Q 043859 91 VIMREIKPAFRSAISALKTTPTALIVDLFGT--------------ES-LAIAEELQIPKYVYVGT 140 (484)
Q Consensus 91 ~~~~~~~~~l~~~l~~~~~~pD~VI~D~~~~--------------~~-~~~A~~lgIP~v~~~~~ 140 (484)
..+......+.+++++. +||.+..+..++ +. ..++...|||+.-+.+.
T Consensus 42 ~Rl~~i~~~l~~~i~~~--~Pd~vaiE~vf~~~n~~s~~~lgqarGv~~~a~~~~~ipv~eytp~ 104 (158)
T 1hjr_A 42 SRLKLIYAGVTEIITQF--QPDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVFEYAAR 104 (158)
T ss_dssp HHHHHHHHHHHHHHHHH--CCSEEEEEECCCCCCTTTHHHHHHHHHHHHHHHHTTTCCEEEEEHH
T ss_pred HHHHHHHHHHHHHHHHc--CCCEEEEeecccccChHHHHHHHHHHHHHHHHHHHcCCCEEEECHH
Confidence 34455667889999999 999998774332 22 24777789998877643
No 256
>2qh9_A UPF0215 protein AF_1433; structural genomics, PSI-2, MCSG, PR structure initiative; 1.80A {Archaeoglobus fulgidus}
Probab=23.60 E-value=90 Score=26.18 Aligned_cols=40 Identities=15% Similarity=0.149 Sum_probs=27.3
Q ss_pred HHHHHHHhcCCC--CeEEEeCCchhhHH------HHHHHhCCCeEEEe
Q 043859 99 AFRSAISALKTT--PTALIVDLFGTESL------AIAEELQIPKYVYV 138 (484)
Q Consensus 99 ~l~~~l~~~~~~--pD~VI~D~~~~~~~------~~A~~lgIP~v~~~ 138 (484)
.+.++++++..+ +|+|+.|...+++. .+...+|+|+|.+.
T Consensus 51 ~i~~~~~~l~~~p~~~vvllDG~g~agfn~~di~~l~~~~~~P~I~V~ 98 (184)
T 2qh9_A 51 KLISMVRRSKFREQIKCIFLPGITLGGFNLVDIQRVYRETKIPVVVVM 98 (184)
T ss_dssp HHHHHHTTCTTTTTEEEEEESSSEETTTEECCHHHHHHHHCCCEEEEE
T ss_pred HHHHHHHhcCCCCCCcEEEECCEeeccCCEeCHHHHHHhhCCCEEEEE
Confidence 344556555434 59999997655432 47778999999875
No 257
>1q1v_A DEK protein; winged-helix motif, DNA binding protein; NMR {Homo sapiens} SCOP: a.159.4.1
Probab=23.54 E-value=1.6e+02 Score=20.23 Aligned_cols=54 Identities=17% Similarity=0.244 Sum_probs=29.9
Q ss_pred CccCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhh-hcCCCChHHHHHHHHHH
Q 043859 418 GVVGREEIKTMVRRILVDEEGYEIRAKVKELQRSAQKAW-TRESGSSYSSLARLAKE 473 (484)
Q Consensus 418 ~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~-~~~~g~~~~~~~~~~~~ 473 (484)
...+.++|.++|+++|.+.+.+... .+++++.+.+.+ .-.-.+....|...|..
T Consensus 10 ~~Psd~ei~~~I~~IL~~aDL~tvT--~K~VR~~Le~~~pg~dLs~kK~~I~~~I~~ 64 (70)
T 1q1v_A 10 KPPTDEELKETIKKLLASANLEEVT--MKQICKKVYENYPTYDLTERKDFIKTTVKE 64 (70)
T ss_dssp CCCCHHHHHHHHHHHHTTSCGGGCC--HHHHHHHHHHHCSSSCCSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHhCCHHHHh--HHHHHHHHHHHccCCCChHHHHHHHHHHHH
Confidence 3578899999999999875533233 244555544333 11222223355555544
No 258
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=23.29 E-value=35 Score=29.28 Aligned_cols=33 Identities=9% Similarity=0.244 Sum_probs=24.9
Q ss_pred CeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCC
Q 043859 8 PHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 8 ~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
|||+++-. |.+ -..+|+.|.++ ||+|+++...+
T Consensus 1 M~iiIiG~---G~~--G~~la~~L~~~-g~~v~vid~~~ 33 (218)
T 3l4b_C 1 MKVIIIGG---ETT--AYYLARSMLSR-KYGVVIINKDR 33 (218)
T ss_dssp CCEEEECC---HHH--HHHHHHHHHHT-TCCEEEEESCH
T ss_pred CEEEEECC---CHH--HHHHHHHHHhC-CCeEEEEECCH
Confidence 67777764 433 35789999999 99999988653
No 259
>1o97_D Electron transferring flavoprotein alpha-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 c.31.1.2 PDB: 1o95_D* 1o96_B* 1o94_D* 3clu_D* 3clt_D* 3clr_D* 3cls_D*
Probab=23.27 E-value=3.3e+02 Score=25.01 Aligned_cols=96 Identities=14% Similarity=0.096 Sum_probs=53.6
Q ss_pred HHHHHHHHHHhcCC-CeEEEEecCCCchhHHHHHhhhccCCCceEEEecCCCCCCCCCCCCchHHHHHHHHHHHhhHHHH
Q 043859 23 PVLELGKRLVTLYN-FQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDISGLVDPDAAVVTIISVIMREIKPAFR 101 (484)
Q Consensus 23 P~l~La~~L~~r~G-h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 101 (484)
-++..|++|.+. | .+|+.++-.+..+ ..+...-..+. -+.+-+....+ .. . .......+.
T Consensus 20 eal~~A~~L~e~-g~~~V~av~~G~~~~-~~~~~a~a~Ga---Dkv~~v~d~~l-~~-----~--------~~~~a~~La 80 (320)
T 1o97_D 20 ELIGAANGLKKS-GEDKVVVAVIGSQAD-AFVPALSVNGV---DELVVVKGSSI-DF-----D--------PDVFEASVS 80 (320)
T ss_dssp HHHHHHHHHCSS-TTCEEEEEEESTTGG-GGHHHHCBTTC---SEEEEEECSCS-SC-----C--------HHHHHHHHH
T ss_pred HHHHHHHHHhhC-CCCcEEEEEECCcHH-HHHHHHHhcCC---ceEEEEeCccc-CC-----C--------HHHHHHHHH
Confidence 467788888775 7 5888776554332 22221112331 11222222111 11 0 111234556
Q ss_pred HHHHhcCCCCeEEEeCCchhh---HHHHHHHhCCCeEEEec
Q 043859 102 SAISALKTTPTALIVDLFGTE---SLAIAEELQIPKYVYVG 139 (484)
Q Consensus 102 ~~l~~~~~~pD~VI~D~~~~~---~~~~A~~lgIP~v~~~~ 139 (484)
+++++. +||+|++-....+ +..+|.+|++|.++-.+
T Consensus 81 ~~i~~~--~pdlVL~g~ts~G~~laprlAa~L~~~~vtdv~ 119 (320)
T 1o97_D 81 ALIAAH--NPSVVLLPHSVDSLGYASSLASKTGYGFATDVY 119 (320)
T ss_dssp HHHHHH--CCSEEEEECSHHHHTTHHHHHHTSSCEEEEEEC
T ss_pred HHHHhc--CCCEEEEeCCCchhhHHHHHHHHhCCCccccEE
Confidence 677778 8999998865442 34699999999998664
No 260
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=23.24 E-value=73 Score=28.38 Aligned_cols=42 Identities=19% Similarity=0.272 Sum_probs=34.8
Q ss_pred CCCeEEEEcCC---CccChHHHHHHHHHHHhcCCCeEEEEecCCCc
Q 043859 6 SKPHAVLLASP---GVGHVIPVLELGKRLVTLYNFQVTIFVVASQT 48 (484)
Q Consensus 6 ~~~~il~~~~p---~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~~~ 48 (484)
.+||.+|++.+ +.|-=.-.-+|++.|.+| |++||..=-.++.
T Consensus 21 ~~mKyIfVTGGVvSglGKGi~aaSlG~LLk~r-G~~Vt~~KiDPYl 65 (294)
T 2c5m_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSC-GLHVTSIKIDPYI 65 (294)
T ss_dssp CCCEEEEEEECSSTTSCHHHHHHHHHHHHHTT-TCCEECCEEECBC
T ss_pred eceEEEEEcCccccccchHHHHHHHHHHHHHC-CCeeEEEecCCce
Confidence 46899999986 666677889999999999 9999987766543
No 261
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=23.20 E-value=1e+02 Score=27.17 Aligned_cols=41 Identities=17% Similarity=0.173 Sum_probs=26.4
Q ss_pred CCCCCeEEEEcCCCc--cChHHHHH-HHHHHHhcCCCeEEEEecC
Q 043859 4 SSSKPHAVLLASPGV--GHVIPVLE-LGKRLVTLYNFQVTIFVVA 45 (484)
Q Consensus 4 ~~~~~~il~~~~p~~--GHv~P~l~-La~~L~~r~Gh~Vt~~~~~ 45 (484)
.+..|||+++....+ |.-.-++. +++.|.+. |++|.++--.
T Consensus 31 ~~~~mkIliI~GS~r~~s~t~~La~~~~~~l~~~-g~eve~idL~ 74 (247)
T 2q62_A 31 STHRPRILILYGSLRTVSYSRLLAEEARRLLEFF-GAEVKVFDPS 74 (247)
T ss_dssp CCSCCEEEEEECCCCSSCHHHHHHHHHHHHHHHT-TCEEEECCCT
T ss_pred cCCCCeEEEEEccCCCCCHHHHHHHHHHHHHhhC-CCEEEEEEhh
Confidence 345688888887644 44444444 55666677 8998876543
No 262
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=23.02 E-value=1.2e+02 Score=31.60 Aligned_cols=118 Identities=7% Similarity=0.023 Sum_probs=71.9
Q ss_pred eEecCCcchhhhccCCCccccccccCchhHHHHHhcCCceeecccccccchhHHHHHhhhcceEEeee-cCCCCccCHHH
Q 043859 346 VVVPQWAPQIDILSHPSVGGFLSHCGWNSTLESITNGVPMIVWPLYSEQRMNATILTEELGVAIRSKV-LPSKGVVGREE 424 (484)
Q Consensus 346 v~v~~~ipq~~vL~~~~~~~~ItHgG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~g~~l~~-~~~~~~~~~~~ 424 (484)
+.+.++.+-.++|..++ ++||=- ...+.|.+..++|+|....-.|++.+- ..|.=..... ..-....+.++
T Consensus 601 ~~~~~~~di~~ll~~aD--~lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~~-----~rg~y~d~~~~~pg~~~~~~~e 672 (729)
T 3l7i_A 601 IDVSNYNDVSELFLISD--CLITDY-SSVMFDYGILKRPQFFFAYDIDKYDKG-----LRGFYMNYMEDLPGPIYTEPYG 672 (729)
T ss_dssp EECTTCSCHHHHHHTCS--EEEESS-CTHHHHHGGGCCCEEEECTTTTTTTSS-----CCSBSSCTTSSSSSCEESSHHH
T ss_pred EeCCCCcCHHHHHHHhC--EEEeec-hHHHHhHHhhCCCEEEecCCHHHHhhc-----cCCcccChhHhCCCCeECCHHH
Confidence 33556667788999999 788874 568899999999999987655554331 1222111100 00002347788
Q ss_pred HHHHHHHHhcccchHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHh
Q 043859 425 IKTMVRRILVDEEGYEIRAKVKELQRSAQKAWTRESGSSYSSLARLAKECG 475 (484)
Q Consensus 425 l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~~~g~~~~~~~~~~~~~~ 475 (484)
|.++|.....+.. .|+++.+++.+..-. . ..|.++.+.++.+++...
T Consensus 673 L~~~i~~~~~~~~--~~~~~~~~~~~~~~~-~-~dg~as~ri~~~i~~~~~ 719 (729)
T 3l7i_A 673 LAKELKNLDKVQQ--QYQEKIDAFYDRFCS-V-DNGKASQYIGDLIHKDIK 719 (729)
T ss_dssp HHHHHTTHHHHHH--HTHHHHHHHHHHHST-T-CCSCHHHHHHHHHHHHHH
T ss_pred HHHHHhhhhccch--hHHHHHHHHHHHhCC-c-cCChHHHHHHHHHHhcCc
Confidence 9999988776321 377777777766431 1 345555556666655443
No 263
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=22.93 E-value=76 Score=27.81 Aligned_cols=34 Identities=21% Similarity=0.190 Sum_probs=22.9
Q ss_pred HHHhcCCCCeEEEeCCchh--hHHHHHHHhCCCeEEEe
Q 043859 103 AISALKTTPTALIVDLFGT--ESLAIAEELQIPKYVYV 138 (484)
Q Consensus 103 ~l~~~~~~pD~VI~D~~~~--~~~~~A~~lgIP~v~~~ 138 (484)
.+.++ +||+||...... ....--++.|||++.+.
T Consensus 54 ~i~~l--~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 54 GILAM--KPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp HHHTT--CCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred HHHcc--CCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 34457 999999876542 22334467899988764
No 264
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=22.82 E-value=3.4e+02 Score=24.62 Aligned_cols=39 Identities=13% Similarity=0.095 Sum_probs=23.9
Q ss_pred HHHHHHHh-cCCCCeEEEeCCchhhH---HHHHHHhCCCeEEEec
Q 043859 99 AFRSAISA-LKTTPTALIVDLFGTES---LAIAEELQIPKYVYVG 139 (484)
Q Consensus 99 ~l~~~l~~-~~~~pD~VI~D~~~~~~---~~~A~~lgIP~v~~~~ 139 (484)
.++.++.+ . ++|.||.-...... ...+...|||+|.+..
T Consensus 52 ~i~~~i~~~~--~vDgiIi~~~~~~~~~~~~~~~~~giPvV~~~~ 94 (350)
T 3h75_A 52 QARELFQGRD--KPDYLMLVNEQYVAPQILRLSQGSGIKLFIVNS 94 (350)
T ss_dssp HHHHHHHSSS--CCSEEEEECCSSHHHHHHHHHTTSCCEEEEEES
T ss_pred HHHHHHhcCC--CCCEEEEeCchhhHHHHHHHHHhCCCcEEEEcC
Confidence 44555554 5 89998875422212 2345567999998764
No 265
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=22.70 E-value=91 Score=23.52 Aligned_cols=39 Identities=8% Similarity=-0.021 Sum_probs=23.7
Q ss_pred CCCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEe
Q 043859 4 SSSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFV 43 (484)
Q Consensus 4 ~~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~ 43 (484)
..++|||+++|..|-+=-.=.-.+-++..++ |.+|....
T Consensus 3 ~~~~mkIlL~C~aGmSTsllv~km~~~a~~~-gi~v~i~a 41 (108)
T 3nbm_A 3 ASKELKVLVLCAGSGTSAQLANAINEGANLT-EVRVIANS 41 (108)
T ss_dssp --CCEEEEEEESSSSHHHHHHHHHHHHHHHH-TCSEEEEE
T ss_pred cccCceEEEECCCCCCHHHHHHHHHHHHHHC-CCceEEEE
Confidence 4678999999998754333333333444456 77777754
No 266
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=22.67 E-value=59 Score=30.12 Aligned_cols=33 Identities=12% Similarity=0.106 Sum_probs=27.6
Q ss_pred CCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecC
Q 043859 7 KPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVA 45 (484)
Q Consensus 7 ~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~ 45 (484)
+|||.|+-.+..| ..+|..|.+. ||+|+++...
T Consensus 14 ~~kI~iIG~G~mG-----~ala~~L~~~-G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWG-----TVFAQMLHEN-GEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHT-TCEEEEECSS
T ss_pred CCcEEEECcCHHH-----HHHHHHHHhC-CCeEEEEeCC
Confidence 6899999887777 5789999999 9999988654
No 267
>2dgd_A 223AA long hypothetical arylmalonate decarboxylas; octamer, alpha/beta structure, lyase; 2.90A {Sulfolobus tokodaii}
Probab=22.61 E-value=2.3e+02 Score=24.17 Aligned_cols=97 Identities=11% Similarity=0.029 Sum_probs=48.5
Q ss_pred HHHHHHHHHhcCC-CeEEEEecCCCc-hhHHHHHhhhccCCCceEEEecCCCCCCCCCCCCchHHHHHHHHHHHhhHHHH
Q 043859 24 VLELGKRLVTLYN-FQVTIFVVASQT-SAAESKILQSAMSSKLCHVIEIPAPDISGLVDPDAAVVTIISVIMREIKPAFR 101 (484)
Q Consensus 24 ~l~La~~L~~r~G-h~Vt~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 101 (484)
.-+++++++.. | .+|-++++.... ....+..++..+ +++.........+ .. .+. +...+.+.
T Consensus 96 ~~a~~~a~~~~-g~~rvgvlt~~~~~~~~~~~~~l~~~G----~~v~~~~~~~~~~------~~--~~~---~~~~~~~~ 159 (223)
T 2dgd_A 96 EESVYELLKKL-NVRKLWIGTPYIKERTLEEVEWWRNKG----FEIVGYDGLGKIR------GI--DIS---NTPIFTIY 159 (223)
T ss_dssp HHHHHHHHHHT-TCCEEEEEESSCHHHHHHHHHHHHTTT----CEEEEEEECCCCS------HH--HHH---TCCHHHHH
T ss_pred HHHHHHHHHHc-CCCeEEEEeCCchHHHHHHHHHHHhCC----cEEecccCCCCCC------cc--hhh---ccCHHHHH
Confidence 55667777766 6 688888754432 223334555555 5554333211111 00 010 00112244
Q ss_pred HHHHhc-CC--CCeEEEeCCchhhH----HHHHHHhCCCeEE
Q 043859 102 SAISAL-KT--TPTALIVDLFGTES----LAIAEELQIPKYV 136 (484)
Q Consensus 102 ~~l~~~-~~--~pD~VI~D~~~~~~----~~~A~~lgIP~v~ 136 (484)
+.++++ .+ ..|+||.....+.. ..+.+.+|+|++.
T Consensus 160 ~~~~~l~~~~~gadaIvLgCT~l~~~~~~~~l~~~~g~PVid 201 (223)
T 2dgd_A 160 RLVKRHLNEVLKADAVYIACTALSTYEAVQYLHEDLDMPVVS 201 (223)
T ss_dssp HHHHTTHHHHTTSSEEEECCTTSCCTTHHHHHHHHHTSCEEE
T ss_pred HHHHHHhcccCCCCEEEEeCCcccHHHHHHHHHHHhCCCEEE
Confidence 444444 23 68999988544332 2345578999553
No 268
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=22.56 E-value=73 Score=32.27 Aligned_cols=45 Identities=18% Similarity=0.200 Sum_probs=37.4
Q ss_pred CCCCCCCCeEEEEcC-CCccChHHHHHHHHHHHhcCCCeEEEEecCC
Q 043859 1 MESSSSKPHAVLLAS-PGVGHVIPVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 1 m~~~~~~~~il~~~~-p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
|....+.++|+|++. ++-|-..=...||..|+++ |++|.++....
T Consensus 1 ~~~~~~~~~i~~~sgkGGvGKTT~a~~lA~~lA~~-G~rVLlvd~D~ 46 (589)
T 1ihu_A 1 MQFLQNIPPYLFFTGKGGVGKTSISCATAIRLAEQ-GKRVLLVSTDP 46 (589)
T ss_dssp CGGGSSCCSEEEEECSTTSSHHHHHHHHHHHHHHT-TCCEEEEECCT
T ss_pred CCCCCCCCEEEEEeCCCcCHHHHHHHHHHHHHHHC-CCcEEEEECCC
Confidence 444455667777766 6999999999999999999 99999999986
No 269
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=22.55 E-value=79 Score=27.76 Aligned_cols=34 Identities=21% Similarity=0.236 Sum_probs=22.4
Q ss_pred HHhcCCCCeEEEeCCchh-hHHHHHHHhCCCeEEEec
Q 043859 104 ISALKTTPTALIVDLFGT-ESLAIAEELQIPKYVYVG 139 (484)
Q Consensus 104 l~~~~~~pD~VI~D~~~~-~~~~~A~~lgIP~v~~~~ 139 (484)
+.++ +||+||...... .....-++.|||++.+..
T Consensus 56 i~~l--~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~ 90 (260)
T 2q8p_A 56 VKKL--KPTHVLSVSTIKDEMQPFYKQLNMKGYFYDF 90 (260)
T ss_dssp HHHT--CCSEEEEEGGGHHHHHHHHHHHTSCCEEECC
T ss_pred HHhc--CCCEEEecCccCHHHHHHHHHcCCcEEEecC
Confidence 4457 999999764332 223455678999887653
No 270
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=22.53 E-value=66 Score=27.28 Aligned_cols=33 Identities=12% Similarity=0.016 Sum_probs=23.6
Q ss_pred CeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecC
Q 043859 8 PHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVA 45 (484)
Q Consensus 8 ~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~ 45 (484)
|||+++ ++.|.+- ..|+++|.++ ||+|+.++-.
T Consensus 1 MkilVt--GatG~iG--~~l~~~L~~~-g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVL--GATGRAG--SAIVAEARRR-GHEVLAVVRD 33 (224)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHT-TCEEEEEESC
T ss_pred CEEEEE--cCCCHHH--HHHHHHHHHC-CCEEEEEEec
Confidence 565554 3444443 5789999999 9999998765
No 271
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=22.47 E-value=61 Score=30.49 Aligned_cols=35 Identities=17% Similarity=0.162 Sum_probs=29.0
Q ss_pred CCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecC
Q 043859 5 SSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVA 45 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~ 45 (484)
+.+|||.|+-.+..| ..+|..|.+. ||+|++....
T Consensus 27 ~~~mkI~VIGaG~mG-----~alA~~La~~-G~~V~l~~r~ 61 (356)
T 3k96_A 27 PFKHPIAILGAGSWG-----TALALVLARK-GQKVRLWSYE 61 (356)
T ss_dssp CCCSCEEEECCSHHH-----HHHHHHHHTT-TCCEEEECSC
T ss_pred ccCCeEEEECccHHH-----HHHHHHHHHC-CCeEEEEeCC
Confidence 346899999888777 4689999999 9999998775
No 272
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=22.42 E-value=82 Score=28.75 Aligned_cols=38 Identities=11% Similarity=0.082 Sum_probs=26.1
Q ss_pred CCCCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecC
Q 043859 3 SSSSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVA 45 (484)
Q Consensus 3 ~~~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~ 45 (484)
..++.|+|++. ++.|.+- ..|++.|.++ ||+|+.+.-.
T Consensus 7 ~~~~~~~vlVT--GatG~iG--~~l~~~L~~~-g~~V~~~~r~ 44 (342)
T 1y1p_A 7 VLPEGSLVLVT--GANGFVA--SHVVEQLLEH-GYKVRGTARS 44 (342)
T ss_dssp SSCTTCEEEEE--TTTSHHH--HHHHHHHHHT-TCEEEEEESS
T ss_pred cCCCCCEEEEE--CCccHHH--HHHHHHHHHC-CCEEEEEeCC
Confidence 34556777665 3344443 4688999999 9999987754
No 273
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=22.41 E-value=1.8e+02 Score=24.02 Aligned_cols=40 Identities=13% Similarity=0.125 Sum_probs=31.3
Q ss_pred CCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCC
Q 043859 5 SSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
++.+||+|+.+++.. ..-+....+.|.+. |++|++++...
T Consensus 7 ~~~~~v~il~~~g~~-~~e~~~~~~~l~~a-g~~v~~vs~~~ 46 (190)
T 2vrn_A 7 LTGKKIAILAADGVE-EIELTSPRAAIEAA-GGTTELISLEP 46 (190)
T ss_dssp CTTCEEEEECCTTCB-HHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred CCCCEEEEEeCCCCC-HHHHHHHHHHHHHC-CCEEEEEecCC
Confidence 556899999887654 44566777889888 99999999764
No 274
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=22.35 E-value=1.6e+02 Score=27.21 Aligned_cols=81 Identities=12% Similarity=-0.084 Sum_probs=0.0
Q ss_pred CCeEEEEecCCCCCCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCCCCCCcccCCCCCCCCCccCCCchhHHHhhcCCceE
Q 043859 268 SESVLYVSFGSGGTLTYEQITELAWGLELSQQRFIWVVRLPNETTGDGSFFTAGSGAGDDDLSSLLPDGFLSRTLDIGVV 347 (484)
Q Consensus 268 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~ 347 (484)
.+-.|+++-.+... +....+...|+..+..+.+.. ....-..
T Consensus 30 ~~~~vi~Np~sg~~---~~~~~i~~~l~~~g~~~~~~~-----------------------t~~~~~~------------ 71 (332)
T 2bon_A 30 PASLLILNGKSTDN---LPLREAIMLLREEGMTIHVRV-----------------------TWEKGDA------------ 71 (332)
T ss_dssp CCEEEEECSSSTTC---HHHHHHHHHHHTTTCCEEEEE-----------------------CCSTTHH------------
T ss_pred ceEEEEECCCCCCC---chHHHHHHHHHHcCCcEEEEE-----------------------ecCcchH------------
Q ss_pred ecCCcchhhhccCCCccccccccCchhHHHHH--------hcCCceeeccc
Q 043859 348 VPQWAPQIDILSHPSVGGFLSHCGWNSTLESI--------TNGVPMIVWPL 390 (484)
Q Consensus 348 v~~~ipq~~vL~~~~~~~~ItHgG~gs~~eal--------~~GvP~v~~P~ 390 (484)
.-+-...+....+ ++|.-||-||++|++ ..++|+.++|.
T Consensus 72 --~~~~~~~~~~~~d--~vvv~GGDGTl~~v~~~l~~~~~~~~~plgiiP~ 118 (332)
T 2bon_A 72 --ARYVEEARKFGVA--TVIAGGGDGTINEVSTALIQCEGDDIPALGILPL 118 (332)
T ss_dssp --HHHHHHHHHHTCS--EEEEEESHHHHHHHHHHHHHCCSSCCCEEEEEEC
T ss_pred --HHHHHHHHhcCCC--EEEEEccchHHHHHHHHHhhcccCCCCeEEEecC
No 275
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=22.17 E-value=27 Score=34.34 Aligned_cols=35 Identities=26% Similarity=0.274 Sum_probs=28.9
Q ss_pred CCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCC
Q 043859 6 SKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 6 ~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
..|||+++-.+-.| ..||+.|.+. ||+|+++=..+
T Consensus 2 ~~M~iiI~G~G~vG-----~~la~~L~~~-~~~v~vId~d~ 36 (461)
T 4g65_A 2 NAMKIIILGAGQVG-----GTLAENLVGE-NNDITIVDKDG 36 (461)
T ss_dssp CCEEEEEECCSHHH-----HHHHHHTCST-TEEEEEEESCH
T ss_pred CcCEEEEECCCHHH-----HHHHHHHHHC-CCCEEEEECCH
Confidence 46999999887766 4699999999 99999887663
No 276
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=22.12 E-value=73 Score=28.76 Aligned_cols=37 Identities=3% Similarity=-0.028 Sum_probs=28.0
Q ss_pred CeEEEEcCCCccC---hHHHHHHHHHHHhcCCCeEEEEecC
Q 043859 8 PHAVLLASPGVGH---VIPVLELGKRLVTLYNFQVTIFVVA 45 (484)
Q Consensus 8 ~~il~~~~p~~GH---v~P~l~La~~L~~r~Gh~Vt~~~~~ 45 (484)
|||+|+..+.... ......++++|.++ ||+|.++...
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~-G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRR-GYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHT-TCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHC-CCEEEEEchh
Confidence 5999999874321 23346799999999 9999988765
No 277
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=22.11 E-value=60 Score=29.84 Aligned_cols=32 Identities=16% Similarity=0.228 Sum_probs=25.5
Q ss_pred CCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEE
Q 043859 5 SSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIF 42 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~ 42 (484)
..+|||+++-.++.| ..+|..|.+. ||+|+++
T Consensus 17 ~~~~kI~IiGaGa~G-----~~~a~~L~~~-G~~V~l~ 48 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVG-----CYYGGMLARA-GHEVILI 48 (318)
T ss_dssp ---CEEEEESCSHHH-----HHHHHHHHHT-TCEEEEE
T ss_pred ccCCcEEEECcCHHH-----HHHHHHHHHC-CCeEEEE
Confidence 346899999888877 5678899998 9999998
No 278
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=22.07 E-value=1.1e+02 Score=23.69 Aligned_cols=35 Identities=26% Similarity=0.300 Sum_probs=21.9
Q ss_pred HHhcCCCCeEEEeCCchhh--HHHHHHHh---------CCCeEEEecc
Q 043859 104 ISALKTTPTALIVDLFGTE--SLAIAEEL---------QIPKYVYVGT 140 (484)
Q Consensus 104 l~~~~~~pD~VI~D~~~~~--~~~~A~~l---------gIP~v~~~~~ 140 (484)
++.. +||+||.|...+. +..+++.+ .+|++.++..
T Consensus 54 ~~~~--~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 54 MAEE--DYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSAD 99 (143)
T ss_dssp HHHS--CCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESC
T ss_pred HhcC--CCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCC
Confidence 3445 8999999965442 34444433 3787777653
No 279
>2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens}
Probab=21.95 E-value=2.6e+02 Score=26.87 Aligned_cols=34 Identities=12% Similarity=0.173 Sum_probs=24.1
Q ss_pred CCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecC
Q 043859 7 KPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVA 45 (484)
Q Consensus 7 ~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~ 45 (484)
+|+|+++..++ ...++++.|+++.|++++++.+.
T Consensus 24 ~~~IlIlG~g~-----r~~al~~~~a~~~g~~~v~~~~~ 57 (452)
T 2qk4_A 24 AARVLIIGSGG-----REHTLAWKLAQSHHVKQVLVAPG 57 (452)
T ss_dssp SEEEEEEECSH-----HHHHHHHHHTTCTTEEEEEEEEC
T ss_pred CcEEEEECCCH-----HHHHHHHHHHhcCCCCEEEEECC
Confidence 46899987763 35678888865438887777654
No 280
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=21.93 E-value=1.5e+02 Score=25.12 Aligned_cols=42 Identities=24% Similarity=0.302 Sum_probs=29.4
Q ss_pred CCCCCCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecC
Q 043859 1 MESSSSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVA 45 (484)
Q Consensus 1 m~~~~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~ 45 (484)
|.+.| .+||+|+.+++.- ..-+....+.|.+. |++|++++..
T Consensus 4 ~~~~m-~~~v~ill~~g~~-~~e~~~~~~~l~~a-g~~v~~vs~~ 45 (208)
T 3ot1_A 4 MEQGM-SKRILVPVAHGSE-EMETVIIVDTLVRA-GFQVTMAAVG 45 (208)
T ss_dssp ------CCEEEEEECTTCC-HHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred ccccc-CCeEEEEECCCCc-HHHHHHHHHHHHHC-CCEEEEEEcC
Confidence 33444 3489998888664 55666777899988 9999999986
No 281
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=21.88 E-value=57 Score=29.61 Aligned_cols=34 Identities=12% Similarity=0.170 Sum_probs=27.5
Q ss_pred CCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCC
Q 043859 7 KPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 7 ~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
+|+|.|+-.+.-|. .+|+.|.++ ||+|+++...+
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~~-G~~V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTEW-PGGVTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTTS-TTCEEEECSST
T ss_pred CCeEEEECcCHHHH-----HHHHHHHHC-CCeEEEEeCCH
Confidence 57999998777764 689999999 99999886543
No 282
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=21.80 E-value=90 Score=27.08 Aligned_cols=125 Identities=14% Similarity=0.118 Sum_probs=66.3
Q ss_pred CCeEEEEcC--CCccChHHHHHHHHHHHhcCCCeEEEEe----cCCCc-hhH--HHHHhhhccCCCc---eEEEecCCCC
Q 043859 7 KPHAVLLAS--PGVGHVIPVLELGKRLVTLYNFQVTIFV----VASQT-SAA--ESKILQSAMSSKL---CHVIEIPAPD 74 (484)
Q Consensus 7 ~~~il~~~~--p~~GHv~P~l~La~~L~~r~Gh~Vt~~~----~~~~~-~~~--~~~~~~~~~~~~~---~~~~~~p~~~ 74 (484)
+|+.+|++. .+.|-..-.+.|++.|+++ |.+|.++= ..... +.+ ........+.... .+...+..
T Consensus 3 ~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~-G~~V~~~KPv~~g~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~-- 79 (228)
T 3of5_A 3 AMKKFFIIGTDTEVGKTYISTKLIEVCEHQ-NIKSLCLKPVASGQSQFSELCEDVESILNAYKHKFTAAEINLISFNQ-- 79 (228)
T ss_dssp TCEEEEEEESSSSSCHHHHHHHHHHHHHHT-TCCEEEECSEEESBCSSSSSBHHHHHHHHHTTTSSCHHHHCSEEESS--
T ss_pred CCcEEEEEeCCCCCCHHHHHHHHHHHHHHC-CCeeEEecceeecCccCCCCCChHHHHHHhcCCCCChhhEEEEEECC--
Confidence 566666555 5889999999999999999 99999974 22211 000 0111111110000 01111111
Q ss_pred CCCCCCCCchHHHHHHHHHHHhhHHHHHHHHh-cCCCCeEEEeCCch---------hhHHHHHHHhCCCeEEEecc
Q 043859 75 ISGLVDPDAAVVTIISVIMREIKPAFRSAISA-LKTTPTALIVDLFG---------TESLAIAEELQIPKYVYVGT 140 (484)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~pD~VI~D~~~---------~~~~~~A~~lgIP~v~~~~~ 140 (484)
+........+. ......+.+.+.+++ +..+.|+||.|... .....+|+.++.|++.+...
T Consensus 80 -----p~sp~~aa~~~-~~~i~~~~i~~~~~~~l~~~~D~vlIEgaggl~~p~~~~~~~adla~~l~~pviLV~~~ 149 (228)
T 3of5_A 80 -----AVAPHIIAAKT-KVDISIENLKQFIEDKYNQDLDILFIEGAGGLLTPYSDHTTQLDLIKALQIPVLLVSAI 149 (228)
T ss_dssp -----SSCHHHHHHHT-TCCCCHHHHHHHHHGGGGSSCSEEEEEEEEETTCBSSSSCBHHHHHHHHTCCEEEEEEC
T ss_pred -----CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHccCCEEEEECCCccccccccchhHHHHHHHcCCCEEEEEcC
Confidence 11111111000 000123456677776 66689999988421 13467899999998877654
No 283
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=21.78 E-value=2.4e+02 Score=23.91 Aligned_cols=43 Identities=12% Similarity=0.072 Sum_probs=28.1
Q ss_pred EecCCcch-hh-hccCCCccccccccCchhHHHHHh---------cCCceeeccc
Q 043859 347 VVPQWAPQ-ID-ILSHPSVGGFLSHCGWNSTLESIT---------NGVPMIVWPL 390 (484)
Q Consensus 347 ~v~~~ipq-~~-vL~~~~~~~~ItHgG~gs~~eal~---------~GvP~v~~P~ 390 (484)
.+.+.... .. ...+++ ..++--||.||.-|... +++|++.+-.
T Consensus 102 i~~~~~~~Rk~~m~~~sd-a~IalPGG~GTldEl~e~lt~~qlg~~~kPvvlln~ 155 (199)
T 3qua_A 102 IVTDTMRERKREMEHRSD-AFIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLDP 155 (199)
T ss_dssp EEESSHHHHHHHHHHHCS-EEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECT
T ss_pred EEcCCHHHHHHHHHHhcC-ccEEeCCCccHHHHHHHHHHHHHhccCCCCEEEEcC
Confidence 33355543 23 344555 37788899999888742 6999998853
No 284
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=21.44 E-value=51 Score=28.06 Aligned_cols=40 Identities=13% Similarity=-0.061 Sum_probs=27.5
Q ss_pred Ccch-hhhccCCCccccccccCchhHHH---HHhcCCceeeccc
Q 043859 351 WAPQ-IDILSHPSVGGFLSHCGWNSTLE---SITNGVPMIVWPL 390 (484)
Q Consensus 351 ~ipq-~~vL~~~~~~~~ItHgG~gs~~e---al~~GvP~v~~P~ 390 (484)
..++ ..++...+...++--||.||..| ++.+++|+++++.
T Consensus 107 ~f~~Rk~~m~~~sda~IvlpGG~GTL~E~~eal~~~kPV~lln~ 150 (195)
T 1rcu_A 107 DFQMRSFVLLRNADVVVSIGGEIGTAIEILGAYALGKPVILLRG 150 (195)
T ss_dssp CHHHHHHHHHTTCSEEEEESCCHHHHHHHHHHHHTTCCEEEETT
T ss_pred CHHHHHHHHHHhCCEEEEecCCCcHHHHHHHHHhcCCCEEEECC
Confidence 3443 34444333347888899998765 5779999999973
No 285
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=21.31 E-value=64 Score=28.26 Aligned_cols=26 Identities=15% Similarity=0.350 Sum_probs=21.1
Q ss_pred ccChHHHHHHHHHHHhcCCCeEEEEecCC
Q 043859 18 VGHVIPVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 18 ~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
.|.+- .++|++|.++ |++|++++.+.
T Consensus 28 SG~mG--~aiA~~~~~~-Ga~V~lv~~~~ 53 (232)
T 2gk4_A 28 TGHLG--KIITETLLSA-GYEVCLITTKR 53 (232)
T ss_dssp CCHHH--HHHHHHHHHT-TCEEEEEECTT
T ss_pred CCHHH--HHHHHHHHHC-CCEEEEEeCCc
Confidence 56543 5689999999 99999999874
No 286
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=21.26 E-value=1.5e+02 Score=22.98 Aligned_cols=39 Identities=13% Similarity=0.134 Sum_probs=26.4
Q ss_pred CCCCCCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEec
Q 043859 1 MESSSSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVV 44 (484)
Q Consensus 1 m~~~~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~ 44 (484)
|...+++++|+++- .+-.-...+.+.|.+. |++|+.+.+
T Consensus 1 Ms~~~~~~~iLivd----d~~~~~~~l~~~L~~~-g~~v~~~~~ 39 (154)
T 2rjn_A 1 MSLNYKNYTVMLVD----DEQPILNSLKRLIKRL-GCNIITFTS 39 (154)
T ss_dssp ---CCSCCEEEEEC----SCHHHHHHHHHHHHTT-TCEEEEESC
T ss_pred CCCCCCCCeEEEEc----CCHHHHHHHHHHHHHc-CCeEEEeCC
Confidence 77778888998875 3455566778888887 898885444
No 287
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=21.18 E-value=1.2e+02 Score=27.59 Aligned_cols=39 Identities=10% Similarity=-0.049 Sum_probs=29.9
Q ss_pred CCeEEEEcCCCcc-C---hHHHHHHHHHHHhcCCCeEEEEecCC
Q 043859 7 KPHAVLLASPGVG-H---VIPVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 7 ~~~il~~~~p~~G-H---v~P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
++||+++..+-.+ | +.-...++++|.++ ||+|+.+.+..
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~-g~~v~~i~~~~ 55 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDA-GIDAHPFDPAE 55 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHT-TCEEEEECTTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHC-CCEEEEEeCCC
Confidence 5688888875333 2 34678999999999 99999998554
No 288
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=21.07 E-value=74 Score=26.81 Aligned_cols=34 Identities=12% Similarity=0.076 Sum_probs=24.3
Q ss_pred CeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCC
Q 043859 8 PHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 8 ~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
|||+++- +.|.+- ..|+++|.++ ||+|+.++-..
T Consensus 1 MkvlVtG--atG~iG--~~l~~~L~~~-g~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MKIGIIG--ATGRAG--SRILEEAKNR-GHEVTAIVRNA 34 (221)
T ss_dssp CEEEEET--TTSHHH--HHHHHHHHHT-TCEEEEEESCS
T ss_pred CeEEEEc--CCchhH--HHHHHHHHhC-CCEEEEEEcCc
Confidence 5665553 344443 5789999999 99999887654
No 289
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=20.99 E-value=79 Score=23.32 Aligned_cols=33 Identities=15% Similarity=0.182 Sum_probs=23.5
Q ss_pred CCeEEEEcCCCccChHHHHHHHHHHHhcCC-CeEEEEecC
Q 043859 7 KPHAVLLASPGVGHVIPVLELGKRLVTLYN-FQVTIFVVA 45 (484)
Q Consensus 7 ~~~il~~~~p~~GHv~P~l~La~~L~~r~G-h~Vt~~~~~ 45 (484)
.++|+++-.+..| ..+++.|.++ | ++|+.+...
T Consensus 5 ~~~v~I~G~G~iG-----~~~~~~l~~~-g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGAGKIG-----QMIAALLKTS-SNYSVTVADHD 38 (118)
T ss_dssp CEEEEEECCSHHH-----HHHHHHHHHC-SSEEEEEEESC
T ss_pred cCeEEEECCCHHH-----HHHHHHHHhC-CCceEEEEeCC
Confidence 4578777443333 4688999999 9 999887654
No 290
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=20.99 E-value=1.1e+02 Score=27.53 Aligned_cols=39 Identities=5% Similarity=-0.133 Sum_probs=28.3
Q ss_pred CCeEEEEcCCCc-cChH---HHHHHHHHHHhcCCCeEEEEecCC
Q 043859 7 KPHAVLLASPGV-GHVI---PVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 7 ~~~il~~~~p~~-GHv~---P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
+|+|+++..+.. -|-. -...++++|.++ ||+|..+....
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~-G~~v~~~~~~~ 44 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREG-GIDAYPVDPKE 44 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHT-TCEEEEECTTT
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHC-CCeEEEEecCc
Confidence 478998876532 2222 346799999999 99999888764
No 291
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=20.92 E-value=79 Score=26.93 Aligned_cols=34 Identities=12% Similarity=0.230 Sum_probs=25.3
Q ss_pred CCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecC
Q 043859 6 SKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVA 45 (484)
Q Consensus 6 ~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~ 45 (484)
..|+|.|+-.+..| ..+|+.|.++ ||+|+++...
T Consensus 18 ~~~~I~iiG~G~mG-----~~la~~l~~~-g~~V~~~~~~ 51 (209)
T 2raf_A 18 QGMEITIFGKGNMG-----QAIGHNFEIA-GHEVTYYGSK 51 (209)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHT-TCEEEEECTT
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHHC-CCEEEEEcCC
Confidence 46789998766555 5678999999 9999987544
No 292
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=20.89 E-value=1.9e+02 Score=21.53 Aligned_cols=41 Identities=20% Similarity=0.243 Sum_probs=29.6
Q ss_pred CCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCC
Q 043859 5 SSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
|+.+||+++|..|-|=-.=.-.+-+.+.++ |.++.+-....
T Consensus 1 M~mkkIll~Cg~G~sTS~l~~k~~~~~~~~-gi~~~i~a~~~ 41 (106)
T 1e2b_A 1 MEKKHIYLFSSAGMSTSLLVSKMRAQAEKY-EVPVIIEAFPE 41 (106)
T ss_dssp CCCEEEEEECSSSTTTHHHHHHHHHHHHHS-CCSEEEEEECS
T ss_pred CCCcEEEEECCCchhHHHHHHHHHHHHHHC-CCCeEEEEecH
Confidence 345689999998666555555788888888 88877655543
No 293
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=20.77 E-value=85 Score=28.15 Aligned_cols=31 Identities=6% Similarity=0.247 Sum_probs=24.1
Q ss_pred CeEEEEcC-CCccChHHHHHHHHHHHhcCCCeEEEEec
Q 043859 8 PHAVLLAS-PGVGHVIPVLELGKRLVTLYNFQVTIFVV 44 (484)
Q Consensus 8 ~~il~~~~-p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~ 44 (484)
|+|.|+-. +..| ..+|+.|.+. ||+|+++..
T Consensus 12 m~I~iIG~tG~mG-----~~la~~l~~~-g~~V~~~~r 43 (286)
T 3c24_A 12 KTVAILGAGGKMG-----ARITRKIHDS-AHHLAAIEI 43 (286)
T ss_dssp CEEEEETTTSHHH-----HHHHHHHHHS-SSEEEEECC
T ss_pred CEEEEECCCCHHH-----HHHHHHHHhC-CCEEEEEEC
Confidence 58999877 6555 4678899999 999986654
No 294
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=20.76 E-value=68 Score=30.12 Aligned_cols=35 Identities=14% Similarity=0.100 Sum_probs=26.9
Q ss_pred CCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecC
Q 043859 5 SSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVA 45 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~ 45 (484)
|++++|+|+-.+-.| +.+|..|.++ |++|+++=..
T Consensus 9 m~~~dVvIVGaG~aG-----l~~A~~L~~~-G~~v~viE~~ 43 (379)
T 3alj_A 9 GKTRRAEVAGGGFAG-----LTAAIALKQN-GWDVRLHEKS 43 (379)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHT-TCEEEEECSS
T ss_pred CCCCeEEEECCCHHH-----HHHHHHHHHC-CCCEEEEecC
Confidence 456789998877665 7789999999 9999988543
No 295
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=20.65 E-value=28 Score=31.79 Aligned_cols=40 Identities=15% Similarity=0.021 Sum_probs=29.7
Q ss_pred CCCCCCCCeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecCC
Q 043859 1 MESSSSKPHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 1 m~~~~~~~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
|.+.+...+|+++-.+..| +..|..|+++ |++|+++-...
T Consensus 1 M~~~~~~~~vvIIG~G~aG-----l~aA~~l~~~-g~~v~lie~~~ 40 (332)
T 3lzw_A 1 MREDTKVYDITIIGGGPVG-----LFTAFYGGMR-QASVKIIESLP 40 (332)
T ss_dssp CEEEEEEEEEEEECCSHHH-----HHHHHHHHHT-TCCEEEECSSS
T ss_pred CCCCCccceEEEECCCHHH-----HHHHHHHHHC-CCCEEEEEcCC
Confidence 3333344688888777665 6888899999 99999997764
No 296
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=20.38 E-value=1.9e+02 Score=23.77 Aligned_cols=49 Identities=20% Similarity=0.178 Sum_probs=34.9
Q ss_pred HHHHHHhhHHHHHHHHhcCCCCeEEEeCCchh-------------h--HHHHHHHhCCCeEEEecc
Q 043859 90 SVIMREIKPAFRSAISALKTTPTALIVDLFGT-------------E--SLAIAEELQIPKYVYVGT 140 (484)
Q Consensus 90 ~~~~~~~~~~l~~~l~~~~~~pD~VI~D~~~~-------------~--~~~~A~~lgIP~v~~~~~ 140 (484)
...+......+.++++++ +||.+..+..++ . +..++...|||+.-+.+.
T Consensus 45 ~~RL~~I~~~l~~~i~~~--~Pd~vaiE~~F~~~n~~sal~lgqarGv~~la~~~~glpv~eytP~ 108 (166)
T 4ep4_A 45 KERVGRIHARVLEVLHRF--RPEAVAVEEQFFYRQNELAYKVGWALGAVLVAAFEAGVPVYAYGPM 108 (166)
T ss_dssp HHHHHHHHHHHHHHHHHH--CCSEEEEECCCCSSCSHHHHHHHHHHHHHHHHHHHHTCCEEEECHH
T ss_pred HHHHHHHHHHHHHHHHHh--CCCEEEEeehhhccChHHHHHHHHHHHHHHHHHHHcCCCEEEECHH
Confidence 445566677899999999 999998875432 1 124677889998877543
No 297
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=20.31 E-value=65 Score=24.89 Aligned_cols=32 Identities=13% Similarity=0.130 Sum_probs=23.3
Q ss_pred CeEEEEcCCCccChHHHHHHHHHHHhcCCCeEEEEecC
Q 043859 8 PHAVLLASPGVGHVIPVLELGKRLVTLYNFQVTIFVVA 45 (484)
Q Consensus 8 ~~il~~~~p~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~ 45 (484)
+||+++-.+..| ..+++.|.+. |++|+++...
T Consensus 7 ~~v~I~G~G~iG-----~~~a~~l~~~-g~~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGLGRFG-----GSIVKELHRM-GHEVLAVDIN 38 (144)
T ss_dssp CSEEEECCSHHH-----HHHHHHHHHT-TCCCEEEESC
T ss_pred CcEEEECCCHHH-----HHHHHHHHHC-CCEEEEEeCC
Confidence 468777644333 4678999999 9999987654
No 298
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=20.20 E-value=93 Score=27.22 Aligned_cols=34 Identities=15% Similarity=0.059 Sum_probs=21.9
Q ss_pred HHHhcCCCCeEEEeCCch--hhHHHHHHHhCCCeEEEe
Q 043859 103 AISALKTTPTALIVDLFG--TESLAIAEELQIPKYVYV 138 (484)
Q Consensus 103 ~l~~~~~~pD~VI~D~~~--~~~~~~A~~lgIP~v~~~ 138 (484)
.+..+ +||+||..... .....--++.|||++.+.
T Consensus 54 ~i~~l--~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (256)
T 2r7a_A 54 GILSL--RPDSVITWQDAGPQIVLDQLRAQKVNVVTLP 89 (256)
T ss_dssp HHHTT--CCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred HHHcc--CCCEEEEcCCCCCHHHHHHHHHcCCcEEEec
Confidence 34457 99999986532 222334467899988763
No 299
>2orv_A Thymidine kinase; TP4A (P1-(5'-adenosyl)P4-(5'- (2'deoxythymidil))tetraphosphate, transferase; HET: 4TA; 2.30A {Homo sapiens} SCOP: c.37.1.24 g.39.1.14
Probab=20.20 E-value=4.3e+02 Score=22.97 Aligned_cols=37 Identities=11% Similarity=0.223 Sum_probs=32.6
Q ss_pred eEEEEcCC-CccChHHHHHHHHHHHhcCCCeEEEEecCC
Q 043859 9 HAVLLASP-GVGHVIPVLELGKRLVTLYNFQVTIFVVAS 46 (484)
Q Consensus 9 ~il~~~~p-~~GHv~P~l~La~~L~~r~Gh~Vt~~~~~~ 46 (484)
+|.|++.+ +.|-..-++.++.....+ |.+|.++.+.-
T Consensus 20 ~l~v~~G~MgsGKTT~lL~~~~r~~~~-g~kvli~kp~~ 57 (234)
T 2orv_A 20 QIQVILGPMFSGKSTELMRRVRRFQIA-QYKCLVIKYAK 57 (234)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHHHHTT-TCCEEEEEETT
T ss_pred EEEEEECCCCCcHHHHHHHHHHHHHHC-CCeEEEEeecC
Confidence 67777777 999999999999999999 99999998664
No 300
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=20.09 E-value=1.4e+02 Score=23.57 Aligned_cols=40 Identities=10% Similarity=0.331 Sum_probs=27.7
Q ss_pred CCCeEEEEcC-CCccC--hHHHHHHHHHHHhcCCCeE-EEEecCC
Q 043859 6 SKPHAVLLAS-PGVGH--VIPVLELGKRLVTLYNFQV-TIFVVAS 46 (484)
Q Consensus 6 ~~~~il~~~~-p~~GH--v~P~l~La~~L~~r~Gh~V-t~~~~~~ 46 (484)
..|+++|+-- |-+|+ ..-.+.+|+++.+. ||+| .++-..+
T Consensus 11 ~~~~~~ivv~~~Pyg~~~a~~Al~~A~aala~-g~eV~~VFf~~D 54 (140)
T 2d1p_A 11 GSMRFAIVVTGPAYGTQQASSAFQFAQALIAD-GHELSSVFFYRE 54 (140)
T ss_dssp CCCEEEEEECSCSSSSSHHHHHHHHHHHHHHT-TCEEEEEEECGG
T ss_pred CceEEEEEEcCCCCCcHHHHHHHHHHHHHHHC-CCccCEEEEech
Confidence 3577776654 34554 44557889999998 9999 7766663
No 301
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=20.02 E-value=1.1e+02 Score=27.52 Aligned_cols=39 Identities=18% Similarity=0.244 Sum_probs=29.6
Q ss_pred CCCCeEEEEcCCCccChHHH--HHHHHHHHhcCC-CeEEEEecC
Q 043859 5 SSKPHAVLLASPGVGHVIPV--LELGKRLVTLYN-FQVTIFVVA 45 (484)
Q Consensus 5 ~~~~~il~~~~p~~GHv~P~--l~La~~L~~r~G-h~Vt~~~~~ 45 (484)
.++.||||++.. .+|-.+. -.|++.|.+. | ++|++...+
T Consensus 2 ~~~~kvLiv~G~-~~H~~~~~~~~l~~~l~~~-g~f~V~~~~d~ 43 (281)
T 4e5v_A 2 RKPIKTLLITGQ-NNHNWQVSHVVLKQILENS-GRFDVDFVISP 43 (281)
T ss_dssp CCCEEEEEEESC-CSSCHHHHHHHHHHHHHHT-TSEEEEEEECC
T ss_pred CCceEEEEEcCC-CCCChHHHHHHHHHHHHhc-CCEEEEEEeCC
Confidence 367899999554 4886544 5788888888 7 999998765
Done!