BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043865
(203 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q4KLT0|RN217_XENLA Probable E3 ubiquitin-protein ligase RNF217 OS=Xenopus laevis
GN=rnf217 PE=2 SV=1
Length = 282
Score = 63.9 bits (154), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 72/168 (42%), Gaps = 25/168 (14%)
Query: 1 KIECPGVHCDQFLDLFTCKLMIPSNLFSKWCDVLCEDYVLGFER-----SYCPNRNCMAL 55
+I+CP C++ LD T +P + D++ Y L R CP
Sbjct: 41 EIQCPITECNKHLDESTILYSLPHD------DIIKYKYFLELSRMDSSTKPCPQCKHFTT 94
Query: 56 VVNEGEINYGTLK----KARCPNCKQWFCFQCKVAWHAGYRCEESGN----LRDW-NDIA 106
+ I T K +CP+C+ +CF+C WH G C E LR W N+I
Sbjct: 95 FKRKTHIPNPTKSENKLKIQCPSCQFIWCFRCHAPWHEGVNCREYKKGDKLLRHWANEIE 154
Query: 107 FGKLVERMHGARRPACGSCVERKEGCRVMYC-RCKTSFCYECGGNLKS 153
G+ + + P C ++R EGC M C +C T+FCY CG +
Sbjct: 155 HGQ----RNAQKCPRCKVHIQRTEGCDHMTCSQCNTNFCYRCGERYRQ 198
>sp|P50876|R144A_HUMAN Probable E3 ubiquitin-protein ligase RNF144A OS=Homo sapiens
GN=RNF144A PE=1 SV=2
Length = 292
Score = 60.5 bits (145), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 71/160 (44%), Gaps = 10/160 (6%)
Query: 2 IECPGVHCDQ--FLDLFTCKLMIPSNLFSKWCDVLCEDYVLGFE--RSYCPNRNCMALVV 57
I CP C + L + M+ + + ++ + E VL F+ R++CP C A V
Sbjct: 63 ISCPDAACPKQGHLQENEIECMVAAEIMQRYKKLQFEREVL-FDPCRTWCPASTCQA-VC 120
Query: 58 NEGEINYGTLKKARCPNCKQWFCFQCKVAWHAGYRCEESGN---LRDWNDIAFGKLVERM 114
++ T + +C C+ FC CK +WH G C E+ L AF +
Sbjct: 121 QLQDVGLQTPQPVQCKACRMEFCSTCKASWHPGQGCPETMPITFLPGETSAAFKMEEDDA 180
Query: 115 HGARRPACGSCVERKEGCRVMYCR-CKTSFCYECGGNLKS 153
R P C +ER EGC M C+ CK +FC+ C +L
Sbjct: 181 PIKRCPKCKVYIERDEGCAQMMCKNCKHAFCWYCLESLDD 220
>sp|Q8TC41|RN217_HUMAN Probable E3 ubiquitin-protein ligase RNF217 OS=Homo sapiens
GN=RNF217 PE=2 SV=3
Length = 275
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 70/171 (40%), Gaps = 31/171 (18%)
Query: 1 KIECPGVHCDQFLDLFTCKLMIPSNLFSKWCDVLCEDYVLGFER-----SYCPNRNCMAL 55
+I+CP C +FL+ T + NL + D + Y L R CP
Sbjct: 9 EIKCPITECFEFLEETT----VVYNLTHE--DSIKYKYFLELGRIDSSTKPCPQCKHFTT 62
Query: 56 VVNEGEINYGTLK----KARCPNCKQWFCFQCKVAWHAGYRCEESGN----LRDWNDIAF 107
+G I + K +CP C+ +CF+C WH G C+E LR W
Sbjct: 63 FKKKGHIPTPSRSESKYKIQCPTCQFVWCFKCHSPWHEGVNCKEYKKGDKLLRHWAS--- 119
Query: 108 GKLVERMHGARR----PACGSCVERKEGCRVMYC-RCKTSFCYECGGNLKS 153
E HG R P C ++R EGC M C +C T+FCY CG +
Sbjct: 120 ----EIEHGQRNAQKCPKCKIHIQRTEGCDHMTCSQCNTNFCYRCGERYRQ 166
>sp|D3YYI7|RN217_MOUSE Probable E3 ubiquitin-protein ligase RNF217 OS=Mus musculus
GN=Rnf217 PE=3 SV=2
Length = 515
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 72/166 (43%), Gaps = 31/166 (18%)
Query: 1 KIECPGVHCDQFLDLFTCKLMIPSNLFSKWCDVLCEDYVLGFER-----SYCPNRNCMAL 55
+I+CP C +FL+ T + NL + D + Y L R CP
Sbjct: 274 EIKCPVTECFEFLEETT----VVYNLTHE--DSIKYKYFLELGRIDSSTKPCPQCKHFTT 327
Query: 56 VVNEGEINYGTLKKAR----CPNCKQWFCFQCKVAWHAGYRCEE--SGN--LRDWNDIAF 107
+G I + ++R CP C+ +CF+C WH G C+E G+ LR W
Sbjct: 328 FKKKGHIPTPSRSESRYKIQCPTCQLIWCFKCHSPWHEGVNCKEYKKGDKLLRHWAS--- 384
Query: 108 GKLVERMHGARR----PACGSCVERKEGCRVMYC-RCKTSFCYECG 148
E HG R P C ++R EGC M C +C T+FCY CG
Sbjct: 385 ----EIEHGQRNAQKCPKCKIHIQRTEGCDHMTCSQCNTNFCYRCG 426
>sp|Q5RFV4|R1441_DANRE Probable E3 ubiquitin-protein ligase RNF144A-A OS=Danio rerio
GN=rnf144aa PE=3 SV=1
Length = 293
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 2 IECPGVHCDQ--FLDLFTCKLMIPSNLFSKWCDVLCE-DYVLGFERSYCPNRNCMALVVN 58
I CP C + L + M+ + + ++ + E + +L R++CP+ C A V
Sbjct: 63 ISCPDSACPKRGHLQENEIECMVATEIMQRYRKLQFEKEVLLDPSRTWCPSSTCQA-VCQ 121
Query: 59 EGEINYGTLKKARCPNCKQWFCFQCKVAWHAGYRCEESGNLRDW---NDIAFGKLVERMH 115
E + + RC C FC CK +WH C+E+ + + +F K +
Sbjct: 122 LKESDTVLPQLVRCSVCTLEFCSACKASWHPDQDCQENVPITSFLPGESSSFFKADDDDA 181
Query: 116 GARR-PACGSCVERKEGCRVMYCR-CKTSFCYECGGNL 151
+R P C +ER EGC M C+ CK +FC+ C +L
Sbjct: 182 PIKRCPKCKVYIERDEGCAQMMCKNCKHAFCWYCLESL 219
>sp|Q7Z419|R144B_HUMAN E3 ubiquitin-protein ligase RNF144B OS=Homo sapiens GN=RNF144B PE=1
SV=1
Length = 303
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 75/176 (42%), Gaps = 18/176 (10%)
Query: 1 KIECPGVHCDQFLDLFTCKL--MIPSNLFSKWCDVLCEDYV-LGFERSYCPNRNCMALVV 57
I CP + C L ++ ++P + F + + E V L R++CP +C V
Sbjct: 72 PITCPDMVCLNHGTLQEAEIACLVPVDQFQLYQRLKFEREVHLDPYRTWCPVADCQT-VC 130
Query: 58 NEGEINYGTLKKARCPNCKQWFCFQCKVAWHAGYRCEESGN--LRDWNDIAFGKLVERMH 115
+ G CP+C FC CK AWHA C +S L + FG E
Sbjct: 131 PVASSDPGQPVLVECPSCHLKFCSCCKDAWHAEVSCRDSQPIVLPTEHRALFGTDAE-AP 189
Query: 116 GARRPACGSCVERKEGCRVMYCR-CKTSFCYECGGNLKSASGCLCKEKGDVYCHHY 170
+ P C +ER EGC M C+ CK +FC+ C NL + D++ HY
Sbjct: 190 IKQCPVCRVYIERNEGCAQMMCKNCKHTFCWYCLQNLDN----------DIFLRHY 235
>sp|A5PK27|R144B_BOVIN E3 ubiquitin-protein ligase RNF144B OS=Bos taurus GN=RNF144B PE=2
SV=1
Length = 304
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 76/176 (43%), Gaps = 18/176 (10%)
Query: 1 KIECPGVHCDQFLDLFTCKL--MIPSNLFSKWCDVLCEDYV-LGFERSYCPNRNCMALVV 57
I CP + C L ++ ++P + F + + E V L R++CP +C V
Sbjct: 73 PITCPDMVCLNHGTLQEAEIACLVPVDQFQLYQRLKFEREVHLDPCRTWCPVADCQT-VC 131
Query: 58 NEGEINYGTLKKARCPNCKQWFCFQCKVAWHAGYRCEES--GNLRDWNDIAFGKLVERMH 115
+ G CP+C FC CK AWHA C +S G L + FG +
Sbjct: 132 PVATSDPGQPVLVECPSCHLKFCSCCKDAWHAEVSCRDSQPGILPTEHGTLFGTETD-AP 190
Query: 116 GARRPACGSCVERKEGCRVMYCR-CKTSFCYECGGNLKSASGCLCKEKGDVYCHHY 170
+ P C +ER EGC M C+ CK +FC+ C NL + D++ HY
Sbjct: 191 IKQCPVCRVYIERNEGCAQMMCKNCKHTFCWYCLQNLDN----------DIFLRHY 236
>sp|A4IIY1|R144A_XENTR Probable E3 ubiquitin-protein ligase RNF144A OS=Xenopus tropicalis
GN=rnf144a PE=2 SV=1
Length = 292
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 88/199 (44%), Gaps = 14/199 (7%)
Query: 2 IECPGVHCDQ--FLDLFTCKLMIPSNLFSKWCDVLCEDYVLGFE-RSYCPNRNCMALVVN 58
I CP C + L + M+ + + K+ + E +L R++CP+ +C A V
Sbjct: 63 ISCPDASCPKRGHLQENEIECMVAAEIMQKYKKLQFEKEILLDPCRTWCPSSSCQA-VCK 121
Query: 59 EGEINYGTLKKARCPNCKQWFCFQCKVAWHAGYRCEESGNLR--DWNDIAFGKLVERMHG 116
E + +C C FC CK WH G C E+ + + +F K +E
Sbjct: 122 LQEKGIQNPQLVQCSACDIEFCSACKANWHPGQGCPENMAITFLPGDSSSFFKSLEDDVP 181
Query: 117 ARR-PACGSCVERKEGCRVMYCR-CKTSFCYECGGNLKSASGCLCKEKG---DVYCHHYC 171
+R P C +ER EGC M C+ CK +FC+ C +L + +KG + H
Sbjct: 182 IKRCPKCKVYIERDEGCAQMMCKNCKHAFCWYCLESLDDDFLLIHYDKGPCRNKLGHSRA 241
Query: 172 AII---SGLILIFTVLGVL 187
++I + ++ IF G+L
Sbjct: 242 SVIWHRTQVVGIFAGFGLL 260
>sp|Q9NWF9|RN216_HUMAN E3 ubiquitin-protein ligase RNF216 OS=Homo sapiens GN=RNF216 PE=1
SV=3
Length = 866
Score = 55.8 bits (133), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 67 LKKARCPN--CKQWFCFQCKVAW--HAGYRCEESGNLRDWNDIAF-GKLVERMHGARRPA 121
+K+ CPN C++ C +C+ W H G CEE L + +DI + + E+M AR
Sbjct: 618 VKRFSCPNPHCRKETCRKCQGLWKEHNGLTCEE---LAEKDDIKYRTSIEEKMTAARIRK 674
Query: 122 CGSC---VERKEGCRVMYCRCKTSFCYEC 147
C C + + EGC M CRC CY C
Sbjct: 675 CHKCGTGLIKSEGCNRMSCRCGAQMCYLC 703
>sp|Q925F3|R144A_MOUSE Probable E3 ubiquitin-protein ligase RNF144A OS=Mus musculus
GN=Rnf144a PE=1 SV=1
Length = 292
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 72/161 (44%), Gaps = 12/161 (7%)
Query: 2 IECPGVHCDQ--FLDLFTCKLMIPSNLFSKWCDVLCEDYVLGFE--RSYCPNRNCMALVV 57
I CP C + L + M+ + + ++ + E VL F+ R++CP C A V
Sbjct: 63 ISCPDAACPKQGHLQENEIECMVAAEIMQRYKKLQFEREVL-FDPCRTWCPASTCQA-VC 120
Query: 58 NEGEINYGTLKKARCPNCKQWFCFQCKVAWHAGYRCEESGN---LRDWNDIAFGKLVERM 114
+I T + +C C FC CK WH G C E+ L AF K+ E
Sbjct: 121 QLQDIGLQTPQLVQCKACDMEFCSACKARWHPGQGCPETMPITFLPGETSSAF-KMEEGD 179
Query: 115 HGARR-PACGSCVERKEGCRVMYCR-CKTSFCYECGGNLKS 153
+R P C +ER EGC M C+ CK +FC+ C +L
Sbjct: 180 APIKRCPKCRVYIERDEGCAQMMCKNCKHAFCWYCLESLDD 220
>sp|P58283|RN216_MOUSE E3 ubiquitin-protein ligase RNF216 OS=Mus musculus GN=Rnf216 PE=1
SV=3
Length = 853
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 67 LKKARCPN--CKQWFCFQCKVAW--HAGYRCEESGNLRDWNDIAF-GKLVERMHGARRPA 121
+K+ CPN C++ C +C+ W H G CEE L + +DI + + E+M AR
Sbjct: 606 VKRFSCPNPRCRKETCRKCQGLWKEHNGLTCEE---LAEKDDIKYRTSIEEKMTAARIRK 662
Query: 122 CGSC---VERKEGCRVMYCRCKTSFCYEC 147
C C + + EGC M CRC CY C
Sbjct: 663 CHKCGTGLIKSEGCNRMSCRCGAQMCYLC 691
>sp|Q9Z1K6|ARI2_MOUSE E3 ubiquitin-protein ligase ARIH2 OS=Mus musculus GN=Arih2 PE=2
SV=1
Length = 492
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 15/145 (10%)
Query: 16 FTCKLMIPSNLFSKWCDVLCEDYVLG-FERSYCPNRNCMALVVNEGEINYGTLKKARCPN 74
F L+ L K+ L DYV F+ CP +C ++ + ++ +C
Sbjct: 195 FVFPLLPNEELRDKYRRYLFRDYVESHFQLQLCPGADCPMVI----RVQEPRARRVQCNR 250
Query: 75 CKQWFCFQCKVAWHAGYRCEESGNLRDW-----NDIAFGKLVERMHGARRPACGSCVERK 129
C + FCF+C+ +HA C +R W +D + H P C C+E+
Sbjct: 251 CSEVFCFKCRQMYHAPTDC---ATIRKWLTKCADDSETANYIS-AHTKDCPKCNICIEKN 306
Query: 130 EGCRVMYC-RCKTSFCYECGGNLKS 153
GC M C +CK FC+ C G+ K+
Sbjct: 307 GGCNHMQCSKCKHDFCWMCLGDWKT 331
>sp|Q8BKD6|R144B_MOUSE E3 ubiquitin-protein ligase RNF144B OS=Mus musculus GN=Rnf144b PE=2
SV=2
Length = 301
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 15/129 (11%)
Query: 44 RSYCPNRNCMALV-VNEGEINYGTLKKARCPNCKQWFCFQCKVAWHAGYRCEESGNLRDW 102
R++CP +C + ++ G+ L CP+C FC CK AWH C +S +
Sbjct: 118 RTWCPVADCQTVCHISAGDPGQPVL--VECPSCHLKFCSCCKDAWHEESSCRDSQSAMPE 175
Query: 103 NDIAFGKLVERMHGARRPACGSCVERKEGCRVMYCR-CKTSFCYECGGNLKSASGCLCKE 161
+ FG + + P C +ER EGC M C+ CK +FC+ C NL +
Sbjct: 176 HGALFGTDAD-APIKQCPVCRIYIERNEGCAQMMCKNCKHTFCWYCLQNLDN-------- 226
Query: 162 KGDVYCHHY 170
D++ HY
Sbjct: 227 --DIFLRHY 233
>sp|Q6DH94|R1442_DANRE Probable E3 ubiquitin-protein ligase RNF144A-B OS=Danio rerio
GN=rnf144ab PE=2 SV=1
Length = 293
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 8/114 (7%)
Query: 44 RSYCPNRNCMAL-VVNEGEINYGTLKKARCPNCKQWFCFQCKVAWHAGYRCEE----SGN 98
R++CP+ +C A+ +NE E+ + +CP C FC C+ H G C+E +
Sbjct: 108 RTWCPSSSCQAVCQLNEAEVQLP--QPVQCPECSLRFCSACRADCHTGQACQEMLPITTF 165
Query: 99 LRDWNDIAFGKLVERMHGARRPACGSCVERKEGCRVMYCR-CKTSFCYECGGNL 151
L N + R P C +ER EGC M C+ CK +FC+ C +L
Sbjct: 166 LPGENGSNLKSQEDEAPIKRCPKCKVYIERDEGCAQMMCKNCKHAFCWYCLESL 219
>sp|O95376|ARI2_HUMAN E3 ubiquitin-protein ligase ARIH2 OS=Homo sapiens GN=ARIH2 PE=1
SV=1
Length = 493
Score = 53.5 bits (127), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 15/145 (10%)
Query: 16 FTCKLMIPSNLFSKWCDVLCEDYVLG-FERSYCPNRNCMALVVNEGEINYGTLKKARCPN 74
F L+ L K+ L DYV ++ CP +C ++ + ++ +C
Sbjct: 196 FVFPLLPNEELREKYRRYLFRDYVESHYQLQLCPGADCPMVI----RVQEPRARRVQCNR 251
Query: 75 CKQWFCFQCKVAWHAGYRCEESGNLRDW-----NDIAFGKLVERMHGARRPACGSCVERK 129
C + FCF+C+ +HA C +R W +D + H P C C+E+
Sbjct: 252 CNEVFCFKCRQMYHAPTDC---ATIRKWLTKCADDSETANYIS-AHTKDCPKCNICIEKN 307
Query: 130 EGCRVMYC-RCKTSFCYECGGNLKS 153
GC M C +CK FC+ C G+ K+
Sbjct: 308 GGCNHMQCSKCKHDFCWMCLGDWKT 332
>sp|O76924|ARI2_DROME Protein ariadne-2 OS=Drosophila melanogaster GN=ari-2 PE=2 SV=1
Length = 509
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 67/153 (43%), Gaps = 25/153 (16%)
Query: 18 CKLMIPSNLF----------SKWCDVLCEDYVLGF-ERSYCPNRNCMALVVNEGEINYGT 66
C + +P +L K+ +DYV E +CP NC ++V EI +
Sbjct: 202 CNVRVPEDLVLTLVTRPVMRDKYQQFAFKDYVKSHPELRFCPGPNCQ-IIVQSSEI---S 257
Query: 67 LKKARCPNCKQWFCFQCKVAWHAGYRCEESGNLRDW-----NDIAFGKLVERMHGARRPA 121
K+A C C FCF+C + +HA C+ ++ W +D + H P
Sbjct: 258 AKRAICKACHTGFCFRCGMDYHAPTDCQV---IKKWLTKCADDSETANYIS-AHTKDCPK 313
Query: 122 CGSCVERKEGCRVMYC-RCKTSFCYECGGNLKS 153
C C+E+ GC M C CK FC+ C G+ K+
Sbjct: 314 CHICIEKNGGCNHMQCFNCKHDFCWMCLGDWKT 346
>sp|Q924T7|RNF31_MOUSE E3 ubiquitin-protein ligase RNF31 OS=Mus musculus GN=Rnf31 PE=1
SV=2
Length = 1066
Score = 49.7 bits (117), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 12/113 (10%)
Query: 69 KARCPNCKQWFCFQCKVAW---HAGYRCEESGNLRDWNDIAFGKLVERMH----GARRPA 121
+A CP C Q FC +CK W H G CE+ N + ND + M+ G P
Sbjct: 808 EATCPQCHQTFCVRCKRQWEEQHRGRSCEDFQNWKRTNDPEYQAQGLAMYLQENGIDCPK 867
Query: 122 CG-SCVERKEGCRVMYC-RCKTSFCYECGGNLKSASGCL---CKEKGDVYCHH 169
C S + GC +C +C+ FC C + + C CK K ++ HH
Sbjct: 868 CKFSYALARGGCMHFHCTQCRHQFCSGCYNAFYAKNKCPDPNCKVKKSLHGHH 920
>sp|Q96EP0|RNF31_HUMAN E3 ubiquitin-protein ligase RNF31 OS=Homo sapiens GN=RNF31 PE=1
SV=1
Length = 1072
Score = 49.3 bits (116), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 12/113 (10%)
Query: 69 KARCPNCKQWFCFQCKVAW---HAGYRCEESGNLRDWNDIAFGKLVERMH----GARRPA 121
+A CP C Q FC +CK W H G CE+ N + ND + M+ G P
Sbjct: 814 EATCPQCHQTFCVRCKRQWEEQHRGRSCEDFQNWKRMNDPEYQAQGLAMYLQENGIDCPK 873
Query: 122 CG-SCVERKEGCRVMYC-RCKTSFCYECGGNLKSASGCL---CKEKGDVYCHH 169
C S + GC +C +C+ FC C + + C C+ K ++ HH
Sbjct: 874 CKFSYALARGGCMHFHCTQCRHQFCSGCYNAFYAKNKCPEPNCRVKKSLHGHH 926
>sp|Q6NW85|ARI1L_DANRE E3 ubiquitin-protein ligase arih1l OS=Danio rerio GN=arih1l PE=2
SV=1
Length = 533
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 68/157 (43%), Gaps = 17/157 (10%)
Query: 2 IECPGVHCDQFLDLFTC-KLMIPSNLFSKWCDVLCEDYVL-GFERSYCPNRNCMALVVNE 59
I CP +CD +D T +L+ S + K+ ++ +V +CP +C +V
Sbjct: 205 ISCPAHNCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVV--- 261
Query: 60 GEINYGTLKKARCPNCKQWFCFQCKVAWHAGYRCEESGNLRDW----NDIAFGKLVERMH 115
++ Y K RC C + FCF C WH +C+ LR W +D + +
Sbjct: 262 -KVQYPDAKPVRC-KCGRQFCFNCGENWHDPVKCKW---LRKWIKKCDDDSETSNWIAAN 316
Query: 116 GARRPACGSCVERKEGCRVMYCR---CKTSFCYECGG 149
P C +E+ GC M CR CK FC+ C G
Sbjct: 317 TKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLG 353
>sp|Q6PFJ9|ARI1_DANRE E3 ubiquitin-protein ligase arih1 OS=Danio rerio GN=arih1 PE=2 SV=1
Length = 527
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 67/157 (42%), Gaps = 17/157 (10%)
Query: 2 IECPGVHCDQFLDLFTC-KLMIPSNLFSKWCDVLCEDYVL-GFERSYCPNRNCMALVVNE 59
I CP CD +D T +L+ S + K+ ++ +V +CP +C +V
Sbjct: 199 ISCPAHSCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVV--- 255
Query: 60 GEINYGTLKKARCPNCKQWFCFQCKVAWHAGYRCEESGNLRDW----NDIAFGKLVERMH 115
++ Y K RC C + FCF C WH +C+ LR W +D + +
Sbjct: 256 -KVQYPDAKPVRC-KCGRQFCFNCGENWHDPVKCKW---LRKWIKKCDDDSETSNWIAAN 310
Query: 116 GARRPACGSCVERKEGCRVMYCR---CKTSFCYECGG 149
P C +E+ GC M CR CK FC+ C G
Sbjct: 311 TKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLG 347
>sp|P0CE10|Y4102_ARATH Putative uncharacterized protein At4g01020, chloroplastic
OS=Arabidopsis thaliana GN=At4g01020 PE=4 SV=1
Length = 1787
Score = 47.4 bits (111), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 34/86 (39%)
Query: 72 CPNCKQWFCFQCKVAWHAGYRCEESGNLRDWNDIAFGKLVERMHGARRPACGSCVERKEG 131
C C C +C + +H CE ++ D++ + P C S +E+ +G
Sbjct: 1672 CGACHSETCTRCHLEYHPLITCERYKKFKENPDLSLKDWAKGKDVKECPICKSTIEKTDG 1731
Query: 132 CRVMYCRCKTSFCYECGGNLKSASGC 157
C + CRC C+ C A C
Sbjct: 1732 CNHLQCRCGKHICWTCLDVFTQAEPC 1757
>sp|B1H1E4|ARI1_XENTR E3 ubiquitin-protein ligase arih1 OS=Xenopus tropicalis GN=arih1
PE=2 SV=1
Length = 529
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 67/157 (42%), Gaps = 17/157 (10%)
Query: 2 IECPGVHCDQFLDLFTC-KLMIPSNLFSKWCDVLCEDYVL-GFERSYCPNRNCMALVVNE 59
I CP CD +D T +L+ S + K+ ++ +V +CP +C +V
Sbjct: 201 ISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVV--- 257
Query: 60 GEINYGTLKKARCPNCKQWFCFQCKVAWHAGYRCEESGNLRDW----NDIAFGKLVERMH 115
++ Y K RC C + FCF C WH +C+ L+ W +D + +
Sbjct: 258 -KVQYPDAKPVRCK-CGRQFCFNCGENWHDPVKCKW---LKKWIKKCDDDSETSNWIAAN 312
Query: 116 GARRPACGSCVERKEGCRVMYCR---CKTSFCYECGG 149
P C +E+ GC M CR CK FC+ C G
Sbjct: 313 TKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLG 349
>sp|Q9Y4X5|ARI1_HUMAN E3 ubiquitin-protein ligase ARIH1 OS=Homo sapiens GN=ARIH1 PE=1
SV=2
Length = 557
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 67/157 (42%), Gaps = 17/157 (10%)
Query: 2 IECPGVHCDQFLDLFTC-KLMIPSNLFSKWCDVLCEDYVL-GFERSYCPNRNCMALVVNE 59
I CP CD +D T +L+ S + K+ ++ +V +CP +C +V
Sbjct: 229 ISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVV--- 285
Query: 60 GEINYGTLKKARCPNCKQWFCFQCKVAWHAGYRCEESGNLRDW----NDIAFGKLVERMH 115
++ Y K RC C + FCF C WH +C+ L+ W +D + +
Sbjct: 286 -KVQYPDAKPVRC-KCGRQFCFNCGENWHDPVKCKW---LKKWIKKCDDDSETSNWIAAN 340
Query: 116 GARRPACGSCVERKEGCRVMYCR---CKTSFCYECGG 149
P C +E+ GC M CR CK FC+ C G
Sbjct: 341 TKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLG 377
>sp|Q9Z1K5|ARI1_MOUSE E3 ubiquitin-protein ligase ARIH1 OS=Mus musculus GN=Arih1 PE=2
SV=3
Length = 555
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 67/157 (42%), Gaps = 17/157 (10%)
Query: 2 IECPGVHCDQFLDLFTC-KLMIPSNLFSKWCDVLCEDYVL-GFERSYCPNRNCMALVVNE 59
I CP CD +D T +L+ S + K+ ++ +V +CP +C +V
Sbjct: 227 ISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVV--- 283
Query: 60 GEINYGTLKKARCPNCKQWFCFQCKVAWHAGYRCEESGNLRDW----NDIAFGKLVERMH 115
++ Y K RC C + FCF C WH +C+ L+ W +D + +
Sbjct: 284 -KVQYPDAKPVRC-KCGRQFCFNCGENWHDPVKCKW---LKKWIKKCDDDSETSNWIAAN 338
Query: 116 GARRPACGSCVERKEGCRVMYCR---CKTSFCYECGG 149
P C +E+ GC M CR CK FC+ C G
Sbjct: 339 TKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLG 375
>sp|A2VEA3|ARI1_BOVIN E3 ubiquitin-protein ligase ARIH1 OS=Bos taurus GN=ARIH1 PE=2 SV=1
Length = 555
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 67/157 (42%), Gaps = 17/157 (10%)
Query: 2 IECPGVHCDQFLDLFTC-KLMIPSNLFSKWCDVLCEDYVL-GFERSYCPNRNCMALVVNE 59
I CP CD +D T +L+ S + K+ ++ +V +CP +C +V
Sbjct: 227 ISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVV--- 283
Query: 60 GEINYGTLKKARCPNCKQWFCFQCKVAWHAGYRCEESGNLRDW----NDIAFGKLVERMH 115
++ Y K RC C + FCF C WH +C+ L+ W +D + +
Sbjct: 284 -KVQYPDAKPVRC-KCGRQFCFNCGENWHDPVKCKW---LKKWIKKCDDDSETSNWIAAN 338
Query: 116 GARRPACGSCVERKEGCRVMYCR---CKTSFCYECGG 149
P C +E+ GC M CR CK FC+ C G
Sbjct: 339 TKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLG 375
>sp|Q32NS4|ARI1_XENLA E3 ubiquitin-protein ligase arih1 OS=Xenopus laevis GN=arih1 PE=2
SV=1
Length = 529
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 66/157 (42%), Gaps = 17/157 (10%)
Query: 2 IECPGVHCDQFLDLFTC-KLMIPSNLFSKWCDVLCEDYVL-GFERSYCPNRNCMALVVNE 59
I CP CD +D T +L+ S + K+ ++ +V +CP +C +V
Sbjct: 201 ISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVV--- 257
Query: 60 GEINYGTLKKARCPNCKQWFCFQCKVAWHAGYRCEESGNLRDW----NDIAFGKLVERMH 115
++ Y K C C + FCF C WH +C+ LR W +D + +
Sbjct: 258 -KVQYPDAKPVHC-KCGRQFCFNCGENWHDPVKCKW---LRKWIKKCDDDSETSNWIAAN 312
Query: 116 GARRPACGSCVERKEGCRVMYCR---CKTSFCYECGG 149
P C +E+ GC M CR CK FC+ C G
Sbjct: 313 TKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLG 349
>sp|Q80TT8|CUL9_MOUSE Cullin-9 OS=Mus musculus GN=Cul9 PE=2 SV=2
Length = 1865
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 64/158 (40%), Gaps = 21/158 (13%)
Query: 4 CPGVHCD-QFLDLFTCKLMIPSNLFSKWCDVLCEDYVLGFER-SYCPN-RNCMALVVNEG 60
CP C Q F ++ + SK+ L YV ++C N + C ++ +G
Sbjct: 1454 CPIADCPAQPTGAFIRNIVSSPEVISKYEKALLRGYVESCSNLTWCTNPQGCDRILCRQG 1513
Query: 61 EINYGTLKKARCPNCKQWFCFQCKVAWHAGYRCEESGNLRDWNDI----------AFGKL 110
+ GT C C CF C ++ + G++ W D A K
Sbjct: 1514 -LGSGT----TCSKCGWASCFSC--SFPEAHYPASCGHMSQWVDDGGYYDGMSVEAQSKH 1566
Query: 111 VERMHGARRPACGSCVERKEGCRVMYC-RCKTSFCYEC 147
+ ++ R P+C + +E+ EGC M C RC FC+ C
Sbjct: 1567 LAKLISKRCPSCQAPIEKNEGCLHMTCARCNHGFCWRC 1604
>sp|Q9JI90|RNF14_MOUSE E3 ubiquitin-protein ligase RNF14 OS=Mus musculus GN=Rnf14 PE=2
SV=2
Length = 485
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 35/184 (19%)
Query: 2 IECPGVHCDQFLDLFTCKLMIPSNLFSKWCDVLCEDYV-LGFERSYCPNRNCMALVVNEG 60
+ CP C K ++ ++LF+++ +L + + L + YCP C V+ E
Sbjct: 264 LNCPEPQCPSVATPGQVKELVEADLFARYDRLLLQSTLDLMADVVYCPRPCCQLPVMQEP 323
Query: 61 EINYGTLKKARCPNCKQWFCFQCKVAWHAGYRCEESG----NLRD---WNDIAFGKLVER 113
GT+ A C +C FC C++ +H C+ + +LR+ D A + +E+
Sbjct: 324 G---GTM--AICSSCNFAFCTLCRLTYHGLSPCKVTAEKLIDLRNEYLQADEATKRFLEQ 378
Query: 114 MHGARR---------------------PACGSCVERKEGCRVMYCR-CKTSFCYECGGNL 151
+G R P CG+ +++ +GC M C C FC+ C G+L
Sbjct: 379 RYGKRVIQKALEEMESKDWLEKNSKSCPCCGTPIQKLDGCNKMTCTGCMQYFCWICMGSL 438
Query: 152 KSAS 155
A+
Sbjct: 439 SRAN 442
>sp|E6ZIJ1|HOIL1_DICLA RanBP-type and C3HC4-type zinc finger-containing protein 1
OS=Dicentrarchus labrax GN=rbck1 PE=3 SV=1
Length = 707
Score = 44.3 bits (103), Expect = 6e-04, Method: Composition-based stats.
Identities = 48/197 (24%), Positives = 74/197 (37%), Gaps = 35/197 (17%)
Query: 3 ECPGVHCDQFLDLFTC---------KLMIPSNLFSKWCDVLCEDYVLGFERSY-CPNRNC 52
E P V C D ++C + ++P+ + +W E SY C +C
Sbjct: 514 EEPEVSCPYRDDTYSCACSLQEREIRALVPAEEYERWLQRGLSVAESRCEGSYHCATPDC 573
Query: 53 MALVVNEGEINYGTLKKARCPNCKQWFCFQCKVAWHAGYRCEESGN---LRDWNDIA--- 106
+ V E +N CP C++ C CK + H G C++ + R ND A
Sbjct: 574 LGWCVYEDTVNV-----FHCPVCRKHNCLICK-SIHEGMNCKQYQDDLAARAINDSAARR 627
Query: 107 ----FGKLVERMHGARRPACGSCVERKEGCRVMYCR-CKTSFCYECGGNL-------KSA 154
LV+ P CG V++++GC + C C T C+ G ++
Sbjct: 628 TTQLLKTLVQSGEAMHCPQCGIIVQKRDGCDWLRCTVCHTEICWVTRGPRWGPKGPGDTS 687
Query: 155 SGCLCKEKGDVYCHHYC 171
GC C CH C
Sbjct: 688 GGCRCNVNNQ-KCHPKC 703
>sp|Q54CX4|Y5521_DICDI Uncharacterized protein DDB_G0292642 OS=Dictyostelium discoideum
GN=DDB_G0292642 PE=4 SV=2
Length = 903
Score = 43.9 bits (102), Expect = 7e-04, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 44/113 (38%), Gaps = 15/113 (13%)
Query: 46 YCPNRNCMALVVNEGEINYGTLKKARCPNCKQWFCFQCKVAWHAGYRC-----EESGNLR 100
+CP +C V E N CP C FC+ C H G +C E G
Sbjct: 703 WCPTPDCDTPVRGGSERN----PILNCPKCSNDFCWICGEYSHEGAKCGTEAMELQGRKN 758
Query: 101 DWNDIAFGKLVERMHGARR-----PACGSCVERKEGCRVMYC-RCKTSFCYEC 147
+ A ++ + + P C S +E+ +GC M C C+ FC+ C
Sbjct: 759 KSIESAATAYIDFLESNKHFVKPCPTCKSHIEKHDGCNHMTCINCQHQFCWLC 811
>sp|Q9UBS8|RNF14_HUMAN E3 ubiquitin-protein ligase RNF14 OS=Homo sapiens GN=RNF14 PE=1
SV=1
Length = 474
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 76/184 (41%), Gaps = 35/184 (19%)
Query: 2 IECPGVHCDQFLDLFTCKLMIPSNLFSKWCDVLCEDYV-LGFERSYCPNRNCMALVVNEG 60
+ CP C K ++ + LF+++ +L + + L + YCP C V+ E
Sbjct: 263 LNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPVMQEP 322
Query: 61 EINYGTLKKARCPNCKQWFCFQCKVAWHAGYRC----EESGNLRD---WNDIAFGKLVER 113
G C +C FC C++ +H C E+ +LR+ D A +L+++
Sbjct: 323 GCTMGI-----CSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANKRLLDQ 377
Query: 114 MHGARR---------------------PACGSCVERKEGCRVMYCR-CKTSFCYECGGNL 151
+G R P CG+ +E+ +GC M C C FC+ C G+L
Sbjct: 378 RYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWICMGSL 437
Query: 152 KSAS 155
A+
Sbjct: 438 SRAN 441
>sp|Q8IWT3|CUL9_HUMAN Cullin-9 OS=Homo sapiens GN=CUL9 PE=1 SV=2
Length = 2517
Score = 43.9 bits (102), Expect = 8e-04, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 64/158 (40%), Gaps = 21/158 (13%)
Query: 4 CPGVHCD-QFLDLFTCKLMIPSNLFSKWCDVLCEDYVLGFER-SYCPN-RNCMALVVNEG 60
CP C Q F ++ + SK+ L YV ++C N + C ++ +G
Sbjct: 2115 CPIADCPAQPTGAFIRAIVSSPEVISKYEKALLRGYVESCSNLTWCTNPQGCDRILCRQG 2174
Query: 61 EINYGTLKKARCPNCKQWFCFQCKVAWHAGYRCEESGNLRDWNDI----------AFGKL 110
+ GT C C CF C ++ + G++ W D A K
Sbjct: 2175 -LGCGT----TCSKCGWASCFNC--SFPEAHYPASCGHMSQWVDDGGYYDGMSVEAQSKH 2227
Query: 111 VERMHGARRPACGSCVERKEGCRVMYC-RCKTSFCYEC 147
+ ++ R P+C + +E+ EGC M C +C FC+ C
Sbjct: 2228 LAKLISKRCPSCQAPIEKNEGCLHMTCAKCNHGFCWRC 2265
>sp|Q22431|ARI2_CAEEL Probable protein ariadne-2 OS=Caenorhabditis elegans GN=T12E12.1
PE=3 SV=2
Length = 482
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 10/92 (10%)
Query: 68 KKARCPNCKQWFCFQCKVAWHAGYRCEESGNLRDW-----NDIAFGKLVERMHGARRPAC 122
K+ C C FC +C +HA CE ++ W +D + H P C
Sbjct: 235 KRVTCMQCHTSFCVKCGADYHAPTSCE---TIKQWMTKCADDSETANYIS-AHTKDCPQC 290
Query: 123 GSCVERKEGCRVMYC-RCKTSFCYECGGNLKS 153
SC+E+ GC + C RC+ FC+ C G+ KS
Sbjct: 291 HSCIEKAGGCNHIQCTRCRHHFCWMCFGDWKS 322
>sp|A9JTG5|HOIL1_DANRE RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Danio
rerio GN=rbck1 PE=2 SV=1
Length = 714
Score = 42.4 bits (98), Expect = 0.002, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 45/111 (40%), Gaps = 17/111 (15%)
Query: 46 YCPNRNCMALVVNEGEINYGTLKKARCPNCKQWFCFQCKVAWHAGYRCEESGN---LRDW 102
+C +C V E +N CP CK+ C CK A H G C++ + R
Sbjct: 574 HCATADCPGWCVYEDTVN-----TFHCPVCKKQNCLLCK-AIHEGMNCKQYQDDLTARAI 627
Query: 103 NDIA-------FGKLVERMHGARRPACGSCVERKEGCRVMYCR-CKTSFCY 145
ND A LV P CG V++KEGC + C C T C+
Sbjct: 628 NDSAARRTRDLLKTLVNSGEAMHCPQCGIIVQKKEGCDWLRCTVCHTEICW 678
>sp|Q9JIR4|RIMS1_RAT Regulating synaptic membrane exocytosis protein 1 OS=Rattus
norvegicus GN=Rims1 PE=1 SV=1
Length = 1615
Score = 37.7 bits (86), Expect = 0.056, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 16/74 (21%)
Query: 94 EESGNLRDW-----------NDIAFGKLVERMHGARR---PACGSCVERK--EGCRVMYC 137
EE G RDW G+ R G + P CG C + K +GC +
Sbjct: 97 EEGGPERDWRLHQQFESYKEQVRKIGEEARRYQGEHKDDAPTCGICHKTKFADGCGHLCS 156
Query: 138 RCKTSFCYECGGNL 151
C+T FC CGG +
Sbjct: 157 YCRTKFCARCGGRV 170
>sp|Q1L8L6|RN19B_DANRE E3 ubiquitin-protein ligase RNF19B OS=Danio rerio GN=rnf19b PE=3
SV=2
Length = 701
Score = 37.4 bits (85), Expect = 0.069, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 51/128 (39%), Gaps = 17/128 (13%)
Query: 46 YCPNRNCMALVVNEGEINYGTLKKARCPNCKQWFCFQCKVAWHAGYRCEESG-----NLR 100
+CP +C V+ G + L R C FC+ CK AWH C+ + +LR
Sbjct: 193 WCPAPDCGFAVIASGCASCPRLV-CRREGCGAEFCYHCKQAWHPNQTCDSARQQRALSLR 251
Query: 101 DWNDIAFGKLVERMHGARRPACGSC----VERKEG-CRVMYCR-CKTSFCYECGGNLK-- 152
++ + E+ H C C ++ +G C M C C FC+ C +
Sbjct: 252 THSNHSPSYTAEQGHTDDIKPCPRCGAYIIKMNDGSCNHMTCAVCGCEFCWLCMKEISDL 311
Query: 153 ---SASGC 157
S SGC
Sbjct: 312 HYLSPSGC 319
>sp|Q9LVW9|ARI4_ARATH Putative E3 ubiquitin-protein ligase ARI4 OS=Arabidopsis thaliana
GN=ARI4 PE=5 SV=2
Length = 529
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 67/163 (41%), Gaps = 32/163 (19%)
Query: 1 KIECPGVHCDQFLDLFTCKLMIPSNLFSKWCDVLCEDYVLGFER-SYCPNR----NCMAL 55
+I C C+ D + ++ + L K+ L E YV +CP+ N +
Sbjct: 161 RIRCMAYKCNTICD--EARQLVSTELAEKFDRFLIESYVEDNNMVKWCPSTPHCGNAIRN 218
Query: 56 VVNEGEINYGTLKKARCPNCKQWFCFQCKVAWHA----------GYRCEESGNLRDWNDI 105
+ ++G+++ + C +C FCF C H+ +CE+ +W +
Sbjct: 219 IKDDGDVD-----EVEC-SCGLQFCFSCLSESHSPCSCLMWKLWKKKCEDESETVNWMTV 272
Query: 106 AFGKLVERMHGARRPACGSCVERKEGCRVMYCRCKTSFCYECG 148
KL P C +++++GC M C+C FC+ CG
Sbjct: 273 N-TKLC--------PKCSKPIQKRDGCNHMTCKCGQHFCWLCG 306
>sp|Q94981|ARI1_DROME Protein ariadne-1 OS=Drosophila melanogaster GN=ari-1 PE=1 SV=2
Length = 503
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 65/158 (41%), Gaps = 17/158 (10%)
Query: 2 IECPGVHCDQFLDLFT-CKLMIPSNLFSKWCDVLCEDYVLGFER-SYCPNRNCMALVVNE 59
I C CD +D T L+ + + K+ ++ +V + +CP+ +C V
Sbjct: 176 ISCAAHGCDILVDDVTVANLVTDARVRVKYQQLITNSFVECNQLLRWCPSVDCTYAV--- 232
Query: 60 GEINYGTLKKARCPNCKQWFCFQCKVAWHAGYRCEESGNLRDW----NDIAFGKLVERMH 115
++ Y ++ C C FCF C WH +C L+ W +D + +
Sbjct: 233 -KVPYAEPRRVHC-KCGHVFCFACGENWHDPVKCRW---LKKWIKKCDDDSETSNWIAAN 287
Query: 116 GARRPACGSCVERKEGCRVMYCR---CKTSFCYECGGN 150
P C +E+ GC M C+ CK FC+ C G+
Sbjct: 288 TKECPRCSVTIEKDGGCNHMVCKNQNCKNEFCWVCLGS 325
>sp|Q9P3U4|YKX2_SCHPO Uncharacterized RING finger protein C328.02 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC328.02 PE=3 SV=1
Length = 504
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 65/163 (39%), Gaps = 26/163 (15%)
Query: 2 IECPGVHCDQFLDLFTCKLMIPSNLFSKWCDVLCEDYVLGFER-SYCPNRNC-MALVVNE 59
I+CP C Q + + + ++ ++ +L +V + +CP +C A+ +
Sbjct: 171 IQCPEESCTQIVSIQSITKVLDEKSLDRYHRLLDRSFVDDNDHLRWCPAPDCEFAIECHV 230
Query: 60 GEINYGTLKKARCPNCKQWFCFQCKVAWHAG----------YRCEESGNLRDWNDIAFGK 109
+ + ++ NC + FCF C H +C++ +W
Sbjct: 231 TQASLSSVVPTVTCNCGKQFCFGCGHDNHQPTICPLVKIWLQKCQDDSETANW------- 283
Query: 110 LVERMHGARR--PACGSCVERKEGCRVMYC-RCKTSFCYECGG 149
+H + P C + +E+ GC M C +CK FC+ C G
Sbjct: 284 ----IHANTKECPKCSTTIEKNGGCNHMTCKKCKYEFCWVCLG 322
>sp|Q9US46|ITT1_SCHPO E3 ubiquitin-protein ligase itt1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=itt1 PE=4 SV=1
Length = 435
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 22/38 (57%)
Query: 114 MHGARRPACGSCVERKEGCRVMYCRCKTSFCYECGGNL 151
++G R P C VER +GC M C C T FC+ CG L
Sbjct: 363 LNGQRCPTCDRVVERIDGCCHMNCLCGTHFCFLCGAYL 400
>sp|Q7TPK1|UHRF1_RAT E3 ubiquitin-protein ligase UHRF1 OS=Rattus norvegicus GN=Uhrf1
PE=2 SV=2
Length = 774
Score = 35.8 bits (81), Expect = 0.19, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 7/60 (11%)
Query: 118 RRPACGSCVERKEGCRVMYCR------CKTSFCYECGGNLKSASGCLCKEKGDVYCHHYC 171
R P GS RK G YC+ C+ C+ CGG LC E D+ H YC
Sbjct: 283 RSPLIGSPSRRKSGPSCQYCKDDENKPCRKCACHICGGREAPEKQVLCDE-CDMAFHLYC 341
>sp|Q99NE5|RIMS1_MOUSE Regulating synaptic membrane exocytosis protein 1 OS=Mus musculus
GN=Rims1 PE=1 SV=2
Length = 1463
Score = 35.8 bits (81), Expect = 0.22, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Query: 108 GKLVERMHGARR---PACGSCVERK--EGCRVMYCRCKTSFCYECGGNL 151
G+ R G + P CG C + K +GC + C+T FC CGG +
Sbjct: 122 GEEARRYQGEHKDDAPTCGICHKTKFADGCGHLCSYCRTKFCARCGGRV 170
>sp|Q86UR5|RIMS1_HUMAN Regulating synaptic membrane exocytosis protein 1 OS=Homo sapiens
GN=RIMS1 PE=1 SV=1
Length = 1692
Score = 35.8 bits (81), Expect = 0.22, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Query: 108 GKLVERMHGARR---PACGSCVERK--EGCRVMYCRCKTSFCYECGGNL 151
G+ R G + P CG C + K +GC + C+T FC CGG +
Sbjct: 99 GEEARRYQGEHKDDAPTCGICHKTKFADGCGHLCSYCRTKFCARCGGRV 147
>sp|P20659|TRX_DROME Histone-lysine N-methyltransferase trithorax OS=Drosophila
melanogaster GN=trx PE=1 SV=4
Length = 3726
Score = 35.0 bits (79), Expect = 0.38, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 14/97 (14%)
Query: 72 CPNCKQWFCFQCKVAWHAGYRCEESGNLRDWNDIAFGKLVERMHGARRP-ACGSCVERKE 130
CP C C+ C ++ + +C++ ++++ G +R+ GA RP C +C++ K
Sbjct: 1341 CPRCT--VCYTCNMSSGSKVKCQKCQ--KNYHSTCLGT-SKRLLGADRPLICVNCLKCKS 1395
Query: 131 GCRVMYCRCKTSFCYECGGNLKSASGCLCKEKGDVYC 167
C T+ + GNL +GC K +C
Sbjct: 1396 --------CSTTKVSKFVGNLPMCTGCFKLRKKGNFC 1424
>sp|Q9UII5|ZN107_HUMAN Zinc finger protein 107 OS=Homo sapiens GN=ZNF107 PE=2 SV=1
Length = 783
Score = 34.7 bits (78), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 56/154 (36%), Gaps = 35/154 (22%)
Query: 18 CKLMIPSNLFSKWCDVLCEDYVLGFERSYCPNRNCMALVVNEGEINYGTLKKARCPNCKQ 77
C PS +F C YV F++ NR N K +C C +
Sbjct: 67 CLTATPSKIFQ------CNKYVKVFDKFSNSNRYKRRHTGN---------KHFKCKECSK 111
Query: 78 WFCFQCKVAWH-------AGYRCEESGNLRDWNDIAFGKLVE--RMHGARRP----ACGS 124
FC ++ H Y+CEE G +W F L + R+H +P CG
Sbjct: 112 SFCVLSQLTQHRRIHTRVNSYKCEECGKAFNW----FSTLTKHKRIHTGEKPYKCEECGK 167
Query: 125 CVERKEGC---RVMYCRCKTSFCYECGGNLKSAS 155
+ ++++ K + C ECG K AS
Sbjct: 168 AFNQSSQLTRHKIIHTEEKPNKCEECGKAFKQAS 201
>sp|Q9LVX0|ARI3_ARATH Probable E3 ubiquitin-protein ligase ARI3 OS=Arabidopsis thaliana
GN=ARI3 PE=2 SV=1
Length = 537
Score = 34.7 bits (78), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 63/159 (39%), Gaps = 22/159 (13%)
Query: 1 KIECPGVHCDQFLDLFTCKLMIPSNLFSKWCDVLCEDYVLGFER-SYCPNRNCMALVVNE 59
+I C C D + ++ L ++ L E YV +CP++ + +
Sbjct: 163 RILCMAHECKAICDEDVVRKLVSPELADRYDRFLIESYVEDNNMVKWCPSKPHCGSAIRK 222
Query: 60 GEINYGTLKKARCPNCKQWFCFQCKVAWHA----------GYRCEESGNLRDWNDIAFGK 109
E + ++ C +C FCF C H+ +CE+ +W + K
Sbjct: 223 IEDGHDVVEVG-C-SCGLQFCFSCLSESHSPCSCLMWKLWKKKCEDESETVNWITVN-TK 279
Query: 110 LVERMHGARRPACGSCVERKEGCRVMYCRCKTSFCYECG 148
L P C +++++GC +M C+C FC+ CG
Sbjct: 280 LC--------PKCSKPIQKRDGCNLMTCKCGQHFCWLCG 310
>sp|Q9BYM8|HOIL1_HUMAN RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Homo
sapiens GN=RBCK1 PE=1 SV=2
Length = 510
Score = 34.3 bits (77), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 58/144 (40%), Gaps = 25/144 (17%)
Query: 46 YCPNRNCMALVVNEGEINYGTLKKARCPNCKQWFCFQCKVAWHAGYRC---EESGNLRDW 102
+C +C E ++N T CP C C CK A H C +E LR
Sbjct: 370 HCKTPDCKGWCFFEDDVNEFT-----CPVCFHVNCLLCK-AIHEQMNCKEYQEDLALRAQ 423
Query: 103 NDIAFGKLVERM-------HGARRPACGSCVERKEGCRVMYCR-CKTSFCY-------EC 147
ND+A + E + R P C V++K+GC + C C T C+
Sbjct: 424 NDVAARQTTEMLKVMLQQGEAMRCPQCQIVVQKKDGCDWIRCTVCHTEICWVTKGPRWGP 483
Query: 148 GGNLKSASGCLCKEKGDVYCHHYC 171
GG ++ GC C+ G + CH C
Sbjct: 484 GGPGDTSGGCRCRVNG-IPCHPSC 506
>sp|Q9WUB0|HOIL1_MOUSE RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Mus
musculus GN=Rbck1 PE=1 SV=2
Length = 508
Score = 33.5 bits (75), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 59/144 (40%), Gaps = 25/144 (17%)
Query: 46 YCPNRNCMALVVNEGEINYGTLKKARCPNCKQWFCFQCKVAWHAGYRCEESGN---LRDW 102
+C +C E ++N T CP C + C CK A H C E + LR
Sbjct: 368 HCKTPDCRGWCFFEDDVNEFT-----CPVCTRVNCLLCK-AIHEHMNCREYQDDLALRAQ 421
Query: 103 NDIAFGKLVERMHGARR-------PACGSCVERKEGCRVMYCR-CKTSFCY-------EC 147
ND+A + E + + P C V++K+GC + C C T C+
Sbjct: 422 NDVAARQTTEMLKVMLQQGEAMHCPQCRIVVQKKDGCDWIRCTVCHTEICWVTKGPRWGP 481
Query: 148 GGNLKSASGCLCKEKGDVYCHHYC 171
GG ++ GC C+ G + CH C
Sbjct: 482 GGPGDTSGGCRCRVNG-IPCHPSC 504
>sp|Q9JIS1|RIMS2_RAT Regulating synaptic membrane exocytosis protein 2 OS=Rattus
norvegicus GN=Rims2 PE=1 SV=1
Length = 1555
Score = 33.1 bits (74), Expect = 1.2, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 8/54 (14%)
Query: 120 PACGSCVERK--EGCRVMYCRCKTSFCYECGGNLKSASG-----C-LCKEKGDV 165
P CG C + K +GC C+T FC CGG + S C LC+++ ++
Sbjct: 90 PTCGICHKTKFADGCGHNCSYCQTKFCARCGGRVSLRSNKVMWVCNLCRKQQEI 143
>sp|Q9EQZ7|RIMS2_MOUSE Regulating synaptic membrane exocytosis protein 2 OS=Mus musculus
GN=Rims2 PE=1 SV=1
Length = 1530
Score = 33.1 bits (74), Expect = 1.2, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 8/54 (14%)
Query: 120 PACGSCVERK--EGCRVMYCRCKTSFCYECGGNLKSASG-----C-LCKEKGDV 165
P CG C + K +GC C+T FC CGG + S C LC+++ ++
Sbjct: 130 PTCGICHKTKFADGCGHNCSYCQTKFCARCGGRVSLRSNKVMWVCNLCRKQQEI 183
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.330 0.145 0.520
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,264,353
Number of Sequences: 539616
Number of extensions: 3204894
Number of successful extensions: 9171
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 109
Number of HSP's that attempted gapping in prelim test: 8935
Number of HSP's gapped (non-prelim): 261
length of query: 203
length of database: 191,569,459
effective HSP length: 112
effective length of query: 91
effective length of database: 131,132,467
effective search space: 11933054497
effective search space used: 11933054497
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 58 (26.9 bits)