Query 043871
Match_columns 255
No_of_seqs 121 out of 389
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 15:39:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043871.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043871hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gha_A Disulfide bond formatio 98.6 6.5E-07 2.2E-11 76.3 12.9 164 36-217 22-193 (202)
2 3bci_A Disulfide bond protein 98.6 1.8E-06 6E-11 71.5 14.3 158 40-215 9-177 (186)
3 3gyk_A 27KDA outer membrane pr 98.5 3.2E-06 1.1E-10 68.9 14.7 148 40-212 20-169 (175)
4 3h93_A Thiol:disulfide interch 98.4 2.4E-06 8.3E-11 70.9 11.4 138 40-201 23-164 (192)
5 2rem_A Disulfide oxidoreductas 98.3 7.7E-06 2.6E-10 67.5 12.8 147 41-211 24-179 (193)
6 3hd5_A Thiol:disulfide interch 98.3 1.4E-05 4.7E-10 66.4 14.4 136 40-200 23-162 (195)
7 4dvc_A Thiol:disulfide interch 98.3 8.7E-06 3E-10 66.1 12.9 153 41-211 20-177 (184)
8 3f4s_A Alpha-DSBA1, putative u 98.3 7.7E-06 2.6E-10 71.1 12.6 154 40-214 37-209 (226)
9 3hz8_A Thiol:disulfide interch 98.2 3.3E-05 1.1E-09 64.8 13.7 152 40-211 22-178 (193)
10 2znm_A Thiol:disulfide interch 98.2 9.9E-06 3.4E-10 67.0 10.2 136 40-199 20-160 (195)
11 3gmf_A Protein-disulfide isome 98.2 1.6E-05 5.4E-10 68.2 11.2 153 40-215 13-196 (205)
12 2in3_A Hypothetical protein; D 97.8 0.00012 4.3E-09 61.3 10.8 167 42-215 6-209 (216)
13 3l9v_A Putative thiol-disulfid 97.8 0.00013 4.4E-09 60.9 10.5 139 43-200 15-156 (189)
14 3l9s_A Thiol:disulfide interch 97.7 0.00026 8.8E-09 59.5 10.7 138 42-200 21-162 (191)
15 3gn3_A Putative protein-disulf 97.7 0.00042 1.4E-08 58.1 11.6 144 40-201 12-166 (182)
16 2imf_A HCCA isomerase, 2-hydro 97.7 0.00027 9.2E-09 59.3 10.2 160 44-214 1-194 (203)
17 3c7m_A Thiol:disulfide interch 97.7 0.00014 4.9E-09 59.6 8.3 66 144-211 115-189 (195)
18 1z6m_A Conserved hypothetical 97.6 0.00074 2.5E-08 54.7 11.4 143 40-210 25-172 (175)
19 3kzq_A Putative uncharacterize 97.5 0.00081 2.8E-08 56.5 10.6 166 44-215 3-202 (208)
20 3gl5_A Putative DSBA oxidoredu 97.2 0.0037 1.3E-07 54.3 11.7 168 43-217 2-214 (239)
21 3fz5_A Possible 2-hydroxychrom 97.0 0.0025 8.6E-08 53.5 8.4 161 42-211 3-197 (202)
22 3feu_A Putative lipoprotein; a 96.9 0.0039 1.3E-07 51.8 8.9 149 41-211 21-179 (185)
23 1r4w_A Glutathione S-transfera 96.3 0.019 6.4E-07 48.8 9.4 78 142-222 134-220 (226)
24 3rpp_A Glutathione S-transfera 96.1 0.075 2.6E-06 45.7 12.4 168 42-217 4-216 (234)
25 1un2_A DSBA, thiol-disulfide i 94.6 0.047 1.6E-06 46.0 5.5 57 142-200 5-61 (197)
26 1v58_A Thiol:disulfide interch 88.3 0.76 2.6E-05 39.3 5.9 42 40-85 95-136 (241)
27 3tdg_A DSBG, putative uncharac 84.1 1.1 3.9E-05 40.0 4.9 41 40-86 145-185 (273)
28 3gv1_A Disulfide interchange p 82.6 1.8 6.2E-05 34.5 5.1 40 40-86 12-51 (147)
29 1t3b_A Thiol:disulfide interch 73.9 4.7 0.00016 33.5 5.3 41 40-85 84-124 (211)
30 1eej_A Thiol:disulfide interch 71.3 4 0.00014 34.0 4.3 40 40-84 84-123 (216)
31 2k8s_A Thioredoxin; dimer, str 69.3 9.7 0.00033 26.0 5.4 16 45-60 3-18 (80)
32 1fo5_A Thioredoxin; disulfide 68.8 5 0.00017 27.0 3.7 35 43-79 3-37 (85)
33 2axo_A Hypothetical protein AT 59.3 3.9 0.00013 36.4 2.0 21 40-60 40-60 (270)
34 3die_A Thioredoxin, TRX; elect 53.2 29 0.00098 23.9 5.5 35 41-77 18-52 (106)
35 2trx_A Thioredoxin; electron t 51.4 34 0.0012 23.7 5.8 34 40-75 18-51 (108)
36 1thx_A Thioredoxin, thioredoxi 50.9 28 0.00096 24.4 5.2 34 40-75 23-56 (115)
37 2i4a_A Thioredoxin; acidophIle 49.7 34 0.0012 23.6 5.5 34 40-75 18-51 (107)
38 3nzn_A Glutaredoxin; structura 49.7 8.1 0.00028 28.1 2.1 19 42-60 20-38 (103)
39 1fb6_A Thioredoxin M; electron 49.5 35 0.0012 23.4 5.5 34 40-75 16-49 (105)
40 3msz_A Glutaredoxin 1; alpha-b 49.2 6.8 0.00023 26.9 1.5 17 44-60 4-20 (89)
41 2yzu_A Thioredoxin; redox prot 48.9 35 0.0012 23.5 5.4 33 41-75 17-49 (109)
42 3qmx_A Glutaredoxin A, glutare 48.7 7.8 0.00027 28.4 1.8 20 41-60 13-32 (99)
43 1nsw_A Thioredoxin, TRX; therm 48.6 34 0.0012 23.6 5.4 34 40-75 15-48 (105)
44 2e0q_A Thioredoxin; electron t 48.5 34 0.0012 23.2 5.2 33 41-75 15-47 (104)
45 1aba_A Glutaredoxin; electron 47.2 7.7 0.00026 27.2 1.6 15 46-60 2-20 (87)
46 3c1r_A Glutaredoxin-1; oxidize 46.3 17 0.00058 27.2 3.5 22 45-70 26-47 (118)
47 1wjk_A C330018D20RIK protein; 46.2 22 0.00076 25.7 4.0 32 41-78 14-45 (100)
48 1dby_A Chloroplast thioredoxin 45.5 43 0.0015 23.1 5.5 34 40-75 17-50 (107)
49 1xwb_A Thioredoxin; dimerizati 45.5 46 0.0016 22.8 5.6 29 41-70 19-47 (106)
50 1nho_A Probable thioredoxin; b 45.4 7.7 0.00026 26.0 1.3 18 44-61 3-20 (85)
51 2b5x_A YKUV protein, TRXY; thi 44.7 32 0.0011 25.1 4.9 38 40-79 27-64 (148)
52 3cxg_A Putative thioredoxin; m 43.9 28 0.00094 26.1 4.4 35 41-81 39-73 (133)
53 3ctg_A Glutaredoxin-2; reduced 43.6 14 0.00047 28.4 2.6 16 45-60 38-53 (129)
54 2wsh_A Endonuclease II; GIY-YI 43.3 10 0.00036 30.7 1.9 18 237-254 122-139 (143)
55 3ha9_A Uncharacterized thiored 43.1 36 0.0012 25.8 5.1 39 40-83 35-73 (165)
56 1t00_A Thioredoxin, TRX; redox 42.9 46 0.0016 23.3 5.3 34 40-75 21-54 (112)
57 3gnj_A Thioredoxin domain prot 42.2 49 0.0017 23.0 5.4 22 40-61 20-41 (111)
58 1w4v_A Thioredoxin, mitochondr 42.0 48 0.0016 23.9 5.4 34 40-75 29-62 (119)
59 4fo5_A Thioredoxin-like protei 41.7 35 0.0012 25.3 4.6 40 41-83 31-70 (143)
60 2lqo_A Putative glutaredoxin R 41.2 8.9 0.00031 28.1 1.1 16 45-60 5-20 (92)
61 3tco_A Thioredoxin (TRXA-1); d 40.6 52 0.0018 22.6 5.3 34 41-76 20-53 (109)
62 2l57_A Uncharacterized protein 40.2 55 0.0019 23.6 5.5 30 40-70 24-53 (126)
63 2l5l_A Thioredoxin; structural 40.1 48 0.0016 24.6 5.2 33 41-75 37-69 (136)
64 2o8v_B Thioredoxin 1; disulfid 39.8 52 0.0018 24.3 5.4 34 40-75 38-71 (128)
65 1fov_A Glutaredoxin 3, GRX3; a 38.7 14 0.00046 24.9 1.7 16 45-60 2-17 (82)
66 2i1u_A Thioredoxin, TRX, MPT46 38.7 57 0.0019 23.1 5.3 29 40-69 28-56 (121)
67 3m9j_A Thioredoxin; oxidoreduc 38.5 57 0.002 22.3 5.2 33 41-75 19-51 (105)
68 2djj_A PDI, protein disulfide- 38.4 97 0.0033 21.8 6.6 24 39-62 22-45 (121)
69 2vlu_A Thioredoxin, thioredoxi 38.2 53 0.0018 23.4 5.1 33 41-75 33-65 (122)
70 3eyt_A Uncharacterized protein 38.0 39 0.0013 25.3 4.5 41 40-82 26-66 (158)
71 1ti3_A Thioredoxin H, PTTRXH1; 37.9 58 0.002 22.6 5.2 28 41-69 25-52 (113)
72 1ep7_A Thioredoxin CH1, H-type 37.4 54 0.0019 22.8 5.0 31 42-74 24-54 (112)
73 3hxs_A Thioredoxin, TRXP; elec 37.4 53 0.0018 24.1 5.1 35 41-77 50-84 (141)
74 3erw_A Sporulation thiol-disul 37.2 75 0.0026 22.9 5.9 32 41-74 33-64 (145)
75 3lor_A Thiol-disulfide isomera 36.4 64 0.0022 24.0 5.5 35 40-75 28-62 (160)
76 3gl3_A Putative thiol:disulfid 35.9 63 0.0022 23.8 5.3 34 40-75 26-59 (152)
77 3ul3_B Thioredoxin, thioredoxi 35.5 91 0.0031 22.6 6.1 35 39-75 39-73 (128)
78 2dj3_A Protein disulfide-isome 35.4 76 0.0026 22.9 5.7 30 40-70 23-52 (133)
79 3l4n_A Monothiol glutaredoxin- 35.1 13 0.00043 28.9 1.2 16 45-60 15-30 (127)
80 1ego_A Glutaredoxin; electron 35.0 16 0.00053 24.8 1.5 16 45-60 2-17 (85)
81 3or5_A Thiol:disulfide interch 34.9 66 0.0023 24.0 5.4 33 41-75 33-65 (165)
82 2xc2_A Thioredoxinn; oxidoredu 34.5 32 0.0011 24.6 3.3 21 41-61 32-52 (117)
83 2l5o_A Putative thioredoxin; s 34.5 73 0.0025 23.5 5.5 40 41-83 27-66 (153)
84 3ic4_A Glutaredoxin (GRX-1); s 34.0 13 0.00046 25.8 1.1 17 44-60 12-28 (92)
85 3aps_A DNAJ homolog subfamily 33.1 75 0.0026 22.5 5.2 34 40-75 19-52 (122)
86 1r7h_A NRDH-redoxin; thioredox 33.1 18 0.00062 23.7 1.6 16 45-60 2-17 (75)
87 1kte_A Thioltransferase; redox 33.0 21 0.00072 25.3 2.0 16 45-60 13-28 (105)
88 1o73_A Tryparedoxin; electron 33.0 79 0.0027 23.1 5.4 33 40-74 26-58 (144)
89 1h75_A Glutaredoxin-like prote 32.9 18 0.00062 24.3 1.6 16 45-60 2-17 (81)
90 3h8q_A Thioredoxin reductase 3 32.8 15 0.00051 27.3 1.2 16 45-60 18-33 (114)
91 4evm_A Thioredoxin family prot 32.7 76 0.0026 22.3 5.2 36 41-78 21-56 (138)
92 2lrt_A Uncharacterized protein 32.6 55 0.0019 24.7 4.6 40 41-83 34-73 (152)
93 2dml_A Protein disulfide-isome 32.6 40 0.0014 24.4 3.6 35 40-76 33-67 (130)
94 3s9f_A Tryparedoxin; thioredox 32.5 59 0.002 25.1 4.8 42 40-83 46-87 (165)
95 2ct6_A SH3 domain-binding glut 32.1 29 0.00099 25.7 2.7 16 44-59 8-23 (111)
96 1i5g_A Tryparedoxin II; electr 32.0 55 0.0019 24.1 4.4 40 41-82 27-66 (144)
97 2fgx_A Putative thioredoxin; N 31.9 51 0.0017 24.7 4.1 19 42-60 28-46 (107)
98 2wul_A Glutaredoxin related pr 31.8 34 0.0011 26.4 3.1 29 168-201 60-88 (118)
99 1t1v_A SH3BGRL3, SH3 domain-bi 31.8 24 0.00081 25.0 2.1 14 45-58 3-16 (93)
100 3hz4_A Thioredoxin; NYSGXRC, P 31.7 74 0.0025 23.7 5.1 34 40-75 22-55 (140)
101 1syr_A Thioredoxin; SGPP, stru 31.7 84 0.0029 22.1 5.2 30 40-70 24-53 (112)
102 3f3q_A Thioredoxin-1; His TAG, 31.5 85 0.0029 22.1 5.2 30 40-70 22-51 (109)
103 2oe3_A Thioredoxin-3; electron 31.5 67 0.0023 23.1 4.7 34 40-75 28-61 (114)
104 1zzo_A RV1677; thioredoxin fol 31.4 78 0.0027 22.4 5.0 29 41-70 24-52 (136)
105 2khp_A Glutaredoxin; thioredox 31.3 20 0.00067 24.9 1.6 16 45-60 7-22 (92)
106 3h8q_A Thioredoxin reductase 3 31.1 42 0.0014 24.7 3.5 46 150-201 37-82 (114)
107 1xfl_A Thioredoxin H1; AT3G510 31.0 72 0.0025 23.3 4.9 21 41-61 37-57 (124)
108 2voc_A Thioredoxin; electron t 30.8 58 0.002 23.0 4.2 21 41-61 16-36 (112)
109 1lu4_A Soluble secreted antige 30.2 47 0.0016 23.8 3.7 32 41-74 23-54 (136)
110 3qfa_C Thioredoxin; protein-pr 30.2 75 0.0026 22.8 4.8 21 41-61 30-50 (116)
111 3ipz_A Monothiol glutaredoxin- 29.9 18 0.00062 26.7 1.2 16 45-60 19-39 (109)
112 3l4n_A Monothiol glutaredoxin- 29.6 52 0.0018 25.3 3.9 30 167-201 53-82 (127)
113 2ywm_A Glutaredoxin-like prote 28.7 61 0.0021 26.2 4.4 29 40-70 19-48 (229)
114 3hcz_A Possible thiol-disulfid 28.5 35 0.0012 25.0 2.7 40 40-82 29-68 (148)
115 2f9s_A Thiol-disulfide oxidore 28.4 1E+02 0.0034 22.7 5.4 29 41-70 25-53 (151)
116 1v98_A Thioredoxin; oxidoreduc 28.3 1.1E+02 0.0037 22.5 5.5 33 40-75 49-81 (140)
117 2pu9_C TRX-F, thioredoxin F-ty 28.3 1E+02 0.0035 21.4 5.2 29 41-70 23-51 (111)
118 2lrn_A Thiol:disulfide interch 28.1 1E+02 0.0034 22.9 5.3 33 41-75 28-60 (152)
119 3rhb_A ATGRXC5, glutaredoxin-C 28.1 25 0.00086 25.6 1.7 15 46-60 21-35 (113)
120 2p5q_A Glutathione peroxidase 27.9 73 0.0025 23.9 4.5 39 41-82 31-69 (170)
121 1x5d_A Protein disulfide-isome 27.5 91 0.0031 22.3 4.9 22 40-61 23-44 (133)
122 3uvt_A Thioredoxin domain-cont 27.1 88 0.003 21.5 4.6 20 42-61 21-40 (111)
123 2hze_A Glutaredoxin-1; thiored 27.0 29 0.00098 25.5 1.9 16 45-60 20-35 (114)
124 1o8x_A Tryparedoxin, TRYX, TXN 26.9 1.1E+02 0.0039 22.4 5.4 32 41-74 27-58 (146)
125 3zyw_A Glutaredoxin-3; metal b 26.9 22 0.00075 26.5 1.2 16 45-60 17-37 (111)
126 3gx8_A Monothiol glutaredoxin- 26.7 48 0.0016 25.0 3.2 28 169-201 59-86 (121)
127 4euy_A Uncharacterized protein 26.5 82 0.0028 21.8 4.3 22 40-61 16-37 (105)
128 3kcm_A Thioredoxin family prot 25.8 1.4E+02 0.0046 21.9 5.7 33 41-75 27-59 (154)
129 2yan_A Glutaredoxin-3; oxidore 25.6 33 0.0011 24.7 2.0 15 46-60 19-38 (105)
130 2vm1_A Thioredoxin, thioredoxi 25.3 1.2E+02 0.004 21.1 5.0 20 42-61 28-47 (118)
131 3ctg_A Glutaredoxin-2; reduced 25.3 56 0.0019 24.9 3.4 29 168-201 78-106 (129)
132 2klx_A Glutaredoxin; thioredox 25.2 19 0.00066 24.9 0.6 16 45-60 7-22 (89)
133 3raz_A Thioredoxin-related pro 25.1 1.5E+02 0.005 21.9 5.8 32 40-73 22-53 (151)
134 2f51_A Thioredoxin; electron t 25.1 1.1E+02 0.0039 21.8 5.0 21 41-61 22-42 (118)
135 2cvb_A Probable thiol-disulfid 25.0 94 0.0032 24.0 4.8 39 41-83 32-70 (188)
136 1wik_A Thioredoxin-like protei 24.9 29 0.00098 25.4 1.5 16 45-60 16-36 (109)
137 1wou_A Thioredoxin -related pr 24.8 1.5E+02 0.0051 21.4 5.6 21 41-61 23-50 (123)
138 2v1m_A Glutathione peroxidase; 24.8 1.1E+02 0.0036 23.0 4.9 40 41-83 30-69 (169)
139 3p2a_A Thioredoxin 2, putative 24.7 1.3E+02 0.0045 22.3 5.4 34 40-75 53-86 (148)
140 2e7p_A Glutaredoxin; thioredox 24.6 37 0.0013 24.3 2.1 15 46-60 22-36 (116)
141 1un2_A DSBA, thiol-disulfide i 24.5 49 0.0017 27.1 3.1 41 42-84 113-156 (197)
142 2wem_A Glutaredoxin-related pr 24.1 26 0.0009 26.6 1.2 16 45-60 21-41 (118)
143 1ilo_A Conserved hypothetical 24.1 1.1E+02 0.0038 19.6 4.4 17 44-61 2-18 (77)
144 2j23_A Thioredoxin; immune pro 23.8 78 0.0027 22.8 3.8 22 40-61 31-52 (121)
145 2vim_A Thioredoxin, TRX; thior 23.7 50 0.0017 22.5 2.6 28 41-69 18-45 (104)
146 1faa_A Thioredoxin F; electron 23.7 1.4E+02 0.0047 21.2 5.2 21 41-61 36-56 (124)
147 1z6n_A Hypothetical protein PA 23.5 39 0.0013 27.0 2.2 21 41-61 53-73 (167)
148 3fkf_A Thiol-disulfide oxidore 23.5 1.1E+02 0.0036 22.2 4.6 31 41-73 32-62 (148)
149 1gh2_A Thioredoxin-like protei 23.4 53 0.0018 22.8 2.8 21 41-61 20-40 (107)
150 1yd0_A Uvrabc system protein C 23.4 44 0.0015 24.8 2.3 57 196-254 24-90 (96)
151 1rw1_A Conserved hypothetical 23.1 32 0.0011 25.7 1.5 16 46-61 2-17 (114)
152 3cmi_A Peroxiredoxin HYR1; thi 22.7 1E+02 0.0034 23.6 4.5 32 41-75 31-62 (171)
153 3d6i_A Monothiol glutaredoxin- 22.4 49 0.0017 23.2 2.4 21 41-61 20-40 (112)
154 2l6c_A Thioredoxin; oxidoreduc 22.0 57 0.002 23.1 2.7 19 42-60 19-37 (110)
155 1zma_A Bacterocin transport ac 21.4 55 0.0019 23.4 2.5 20 42-61 29-48 (118)
156 2ppt_A Thioredoxin-2; thiredox 20.6 1.5E+02 0.005 22.7 5.0 22 40-61 62-83 (155)
157 2gs3_A PHGPX, GPX-4, phospholi 20.6 1.4E+02 0.0046 23.3 4.9 40 41-83 48-87 (185)
158 2cq9_A GLRX2 protein, glutared 20.1 47 0.0016 25.1 2.0 16 45-60 28-43 (130)
No 1
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=98.59 E-value=6.5e-07 Score=76.30 Aligned_cols=164 Identities=16% Similarity=0.164 Sum_probs=110.7
Q ss_pred CCcC-CCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhcc--CceEEEEEeeeeceeecCCcceeecCChhhhhcchhhh
Q 043871 36 PTVK-QDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLT--SIVNLRLIPWGKAQIVEPNETIVCEHGEDECYFNVIHA 112 (255)
Q Consensus 36 ~~~~-~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~--d~vdl~lVP~GnA~~~~~~~~f~CQHGp~EC~gN~iqa 112 (255)
|.++ .+.+|.|..|+.=.||+|++|- ..+.|.+.+.+. ..|.|.++||-- ||+.-=.+-..-.
T Consensus 22 ~~~G~~~a~vtvvef~D~~CP~C~~~~-~~~~~~l~~~~~~~g~v~~~~~~~p~-------------~~~~s~~Aa~aa~ 87 (202)
T 3gha_A 22 PVLGKDDAPVTVVEFGDYKCPSCKVFN-SDIFPKIQKDFIDKGDVKFSFVNVMF-------------HGKGSRLAALASE 87 (202)
T ss_dssp CEESCTTCSEEEEEEECTTCHHHHHHH-HHTHHHHHHHTTTTTSEEEEEEECCC-------------SHHHHHHHHHHHH
T ss_pred ceecCCCCCEEEEEEECCCChhHHHHH-HHhhHHHHHHhccCCeEEEEEEecCc-------------cchhHHHHHHHHH
Confidence 3443 5679999999999999999995 456776654453 367777777632 2222111222223
Q ss_pred hhhhccccccchhhhhhhccccCCCCCC--chhhHHHHhHhh-cCCChhhhhhhhcCchhHHHHHHHHHHhhhcCCCCce
Q 043871 113 CAIKAWPEQLLHFTFIKCLEETSWGPTL--DKEKVWRTCCQN-LKLSPNLIKDCYDNGTGRWLELIYAAETERLKPPIQF 189 (255)
Q Consensus 113 Cai~~~~~~~~~l~fI~Cm~~~~~~~~~--~~~~~~~~Ca~~-~gl~~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~ 189 (255)
|+-.. ++..+++|..=+........+ .........+++ .|+|.+.+.+|.++......+.+..+....+ +++-
T Consensus 88 a~~~~--~~~~f~~~~~aLf~~~~~~~~~~~~~~~L~~~a~~~~Gld~~~~~~~l~s~~~~~~v~~~~~~a~~~--gV~g 163 (202)
T 3gha_A 88 EVWKE--DPDSFWDFHEKLFEKQPDTEQEWVTPGLLGDLAKSTTKIKPETLKENLDKETFASQVEKDSDLNQKM--NIQA 163 (202)
T ss_dssp HHHHH--CGGGHHHHHHHHHHHCCSSSSCCCCHHHHHHHHHHHSSSCHHHHHHHHHHTTTHHHHHHHHHHHHHT--TCCS
T ss_pred HHHhh--CHHHHHHHHHHHHHhCccccccccCHHHHHHHHHHhcCCCHHHHHHHHhChHHHHHHHHHHHHHHHc--CCCc
Confidence 33322 456778888877643221100 123456788888 8999999999999888777777777777766 6899
Q ss_pred eeEEEECCeecCc--chhcHHHHHHHhccC
Q 043871 190 VPWLTLNGDAVGP--DYGNFVKYVCEAYSG 217 (255)
Q Consensus 190 VPwI~iNG~~~~~--~~~nL~~~IC~~y~g 217 (255)
+|+++|||+.+.. ....|...|=...++
T Consensus 164 tPtfvvnG~~~~G~~~~e~l~~~i~~~~~~ 193 (202)
T 3gha_A 164 TPTIYVNDKVIKNFADYDEIKETIEKELKG 193 (202)
T ss_dssp SCEEEETTEECSCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEECCEEecCCCCHHHHHHHHHHHHHh
Confidence 9999999998653 456777777665554
No 2
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=98.55 E-value=1.8e-06 Score=71.50 Aligned_cols=158 Identities=15% Similarity=0.109 Sum_probs=100.1
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhcc--CceEEEEEeeeeceeecCCcceeecCChhhhhcchhhhhhhhc
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLT--SIVNLRLIPWGKAQIVEPNETIVCEHGEDECYFNVIHACAIKA 117 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~--d~vdl~lVP~GnA~~~~~~~~f~CQHGp~EC~gN~iqaCai~~ 117 (255)
.+.+|.|.+|+.-.||+|.+|- ..|.+.+.+++. ..+.|.+.||.-. |+.-=...+.-.|+-..
T Consensus 9 ~~a~~~i~~f~D~~Cp~C~~~~-~~l~~~l~~~~~~~~~v~~~~~~~p~~-------------~~~s~~aa~a~~~a~~~ 74 (186)
T 3bci_A 9 KNGKPLVVVYGDYKCPYCKELD-EKVMPKLRKNYIDNHKVEYQFVNLAFL-------------GKDSIVGSRASHAVLMY 74 (186)
T ss_dssp --CCCEEEEEECTTCHHHHHHH-HHHHHHHHHHTTTTTSSEEEEEECCCS-------------CTTHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEECCCChhHHHHH-HHHHHHHHHHhccCCeEEEEEEecCcC-------------CcchHHHHHHHHHHHHh
Confidence 4568999999999999999995 446666543454 3588888887421 22111222333444433
Q ss_pred cccccchhhhhhhccccCCCCC--CchhhHHHHhHhhcCCChhh---hhhhh--cCchhHHHHHHHHHHhhhcCCCCcee
Q 043871 118 WPEQLLHFTFIKCLEETSWGPT--LDKEKVWRTCCQNLKLSPNL---IKDCY--DNGTGRWLELIYAAETERLKPPIQFV 190 (255)
Q Consensus 118 ~~~~~~~l~fI~Cm~~~~~~~~--~~~~~~~~~Ca~~~gl~~~~---I~~C~--~s~~G~~Ll~~~~~~T~~l~P~~~~V 190 (255)
- +...+.|..=+........ ..........+++.|+|.+. +.+|. ++......+.+..+....+ ++.-+
T Consensus 75 ~--~~~~~~~~~~lf~~~~~~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~~~~~~v~~~~~~a~~~--gv~Gt 150 (186)
T 3bci_A 75 A--PKSFLDFQKQLFAAQQDENKEWLTKELLDKHIKQLHLDKETENKIIKDYKTKDSKSWKAAEKDKKIAKDN--HIKTT 150 (186)
T ss_dssp C--GGGHHHHHHHHHHTCCCTTSCCCCHHHHHHHHHTTCCCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHT--TCCSS
T ss_pred C--HHHHHHHHHHHHhcCcccCCCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHc--CCCCC
Confidence 2 2345666555543221100 02245667888999999998 99999 8887777777776666665 68999
Q ss_pred eEEEECCeecCc--chhcHHHHHHHhc
Q 043871 191 PWLTLNGDAVGP--DYGNFVKYVCEAY 215 (255)
Q Consensus 191 PwI~iNG~~~~~--~~~nL~~~IC~~y 215 (255)
|+++|||+.+.. ....|...|=...
T Consensus 151 Pt~vvnG~~~~G~~~~~~l~~~i~~~~ 177 (186)
T 3bci_A 151 PTAFINGEKVEDPYDYESYEKLLKDKI 177 (186)
T ss_dssp SEEEETTEECSCTTCHHHHHHHHHC--
T ss_pred CeEEECCEEcCCCCCHHHHHHHHHHHH
Confidence 999999998643 3456666664443
No 3
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.52 E-value=3.2e-06 Score=68.87 Aligned_cols=148 Identities=11% Similarity=0.041 Sum_probs=99.7
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccCceEEEEEeeeeceeecCCcceeecCChhhhhcchhhhhhhhccc
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTSIVNLRLIPWGKAQIVEPNETIVCEHGEDECYFNVIHACAIKAWP 119 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lVP~GnA~~~~~~~~f~CQHGp~EC~gN~iqaCai~~~~ 119 (255)
...+|.|.+|+...||+|++|. ..|.+++. +..+ +.|.++++.-. |+.-=...+.-.|+...
T Consensus 20 ~~a~v~i~~f~d~~Cp~C~~~~-~~l~~l~~-~~~~-v~~~~~~~p~~-------------~~~s~~aa~~~~~a~~~-- 81 (175)
T 3gyk_A 20 PEGDVTVVEFFDYNCPYCRRAM-AEVQGLVD-ADPN-VRLVYREWPIL-------------GEGSDFAARAALAARQQ-- 81 (175)
T ss_dssp TTCSEEEEEEECTTCHHHHHHH-HHHHHHHH-HCTT-EEEEEEECCCS-------------CHHHHHHHHHHHHGGGG--
T ss_pred CCCCEEEEEEECCCCccHHHHH-HHHHHHHH-hCCC-EEEEEEeCCCC-------------CCChHHHHHHHHHHHHH--
Confidence 5678999999999999999996 45777766 3556 77777666322 12111122222333322
Q ss_pred cccchhhhhhhccccCCCCCCchhhHHHHhHhhcCCChhhhhhhhcCchhHHHHHHHHHHhhhcCCCCceeeEEEECCee
Q 043871 120 EQLLHFTFIKCLEETSWGPTLDKEKVWRTCCQNLKLSPNLIKDCYDNGTGRWLELIYAAETERLKPPIQFVPWLTLNGDA 199 (255)
Q Consensus 120 ~~~~~l~fI~Cm~~~~~~~~~~~~~~~~~Ca~~~gl~~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iNG~~ 199 (255)
..++.|..=+....... ........+++.|++.+.+.+|.++......+.+..+....+ ++.-+|+++|||+.
T Consensus 82 --~~~~~~~~~lf~~~~~~---~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~--gv~gtPt~~i~g~~ 154 (175)
T 3gyk_A 82 --GKYEAFHWALMGMSGKA---NETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKL--GFNGTPSFVVEDAL 154 (175)
T ss_dssp --TCHHHHHHHHHTCSSCC---SHHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHH--TCCSSSEEEETTEE
T ss_pred --hHHHHHHHHHHhcCCCC---CHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHc--CCccCCEEEECCEE
Confidence 33455554444322222 244567789999999999999999999999888888888776 58999999999987
Q ss_pred cCc--chhcHHHHHH
Q 043871 200 VGP--DYGNFVKYVC 212 (255)
Q Consensus 200 ~~~--~~~nL~~~IC 212 (255)
... ....|.+.|=
T Consensus 155 ~~G~~~~~~l~~~i~ 169 (175)
T 3gyk_A 155 VPGFVEQSQLQDAVD 169 (175)
T ss_dssp ECSCCCHHHHHHHHH
T ss_pred eeCCCCHHHHHHHHH
Confidence 542 3455555553
No 4
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.40 E-value=2.4e-06 Score=70.85 Aligned_cols=138 Identities=9% Similarity=-0.044 Sum_probs=91.6
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccCceEEEEEeeeeceeecCCcceeecCChhhhhcchhhhhhhhccc
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTSIVNLRLIPWGKAQIVEPNETIVCEHGEDECYFNVIHACAIKAWP 119 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lVP~GnA~~~~~~~~f~CQHGp~EC~gN~iqaCai~~~~ 119 (255)
...+|.|..|+...||.|++|.. .|.. +.++..+.+.|+.+|.... +... ...+.-.|+-.
T Consensus 23 ~~~~~~i~~f~d~~Cp~C~~~~~-~l~~-l~~~~~~~v~~~~~p~~~~-------------~~~~-~aa~a~~aa~~--- 83 (192)
T 3h93_A 23 QPGKIEVVELFWYGCPHCYAFEP-TIVP-WSEKLPADVHFVRLPALFG-------------GIWN-VHGQMFLTLES--- 83 (192)
T ss_dssp STTSEEEEEEECTTCHHHHHHHH-HHHH-HHHTCCTTEEEEEEECCCS-------------THHH-HHHHHHHHHHH---
T ss_pred CCCCCEEEEEECCCChhHHHhhH-HHHH-HHHhCCCCeEEEEEehhhc-------------cchH-HHHHHHHHHHH---
Confidence 46789999999999999999964 3443 4335677777887775211 1000 01111222221
Q ss_pred cccchhhhhhhcccc----CCCCCCchhhHHHHhHhhcCCChhhhhhhhcCchhHHHHHHHHHHhhhcCCCCceeeEEEE
Q 043871 120 EQLLHFTFIKCLEET----SWGPTLDKEKVWRTCCQNLKLSPNLIKDCYDNGTGRWLELIYAAETERLKPPIQFVPWLTL 195 (255)
Q Consensus 120 ~~~~~l~fI~Cm~~~----~~~~~~~~~~~~~~Ca~~~gl~~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~i 195 (255)
....++|..=+... .... .........+.+.|+|.+.+.+|.++......+.+..+....+ ++.-+|+++|
T Consensus 84 -~g~~~~~~~~lf~~~~~~~~~~--~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~--gv~gtPt~~v 158 (192)
T 3h93_A 84 -MGVEHDVHNAVFEAIHKEHKKL--ATPEEMADFLAGKGVDKEKFLSTYNSFAIKGQMEKAKKLAMAY--QVTGVPTMVV 158 (192)
T ss_dssp -HTCCHHHHHHHHHHHHTSCCCC--CSHHHHHHHHHTTTCCHHHHHHHHTCHHHHHHHHHHHHHHHHH--TCCSSSEEEE
T ss_pred -cCCHHHHHHHHHHHHHHhCcCC--CCHHHHHHHHHHcCCCHHHHHHHhhCHHHHHHHHHHHHHHHHh--CCCCCCeEEE
Confidence 12334444444321 1122 2355677889999999999999999999888888888777776 6899999999
Q ss_pred CCeecC
Q 043871 196 NGDAVG 201 (255)
Q Consensus 196 NG~~~~ 201 (255)
||++..
T Consensus 159 ng~~~~ 164 (192)
T 3h93_A 159 NGKYRF 164 (192)
T ss_dssp TTTEEE
T ss_pred CCEEEe
Confidence 999753
No 5
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=98.33 E-value=7.7e-06 Score=67.47 Aligned_cols=147 Identities=11% Similarity=-0.012 Sum_probs=94.8
Q ss_pred CCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccCceEEEEEeeeeceeecCCcceeecCChhhhhcchhhhhhhhcccc
Q 043871 41 DEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTSIVNLRLIPWGKAQIVEPNETIVCEHGEDECYFNVIHACAIKAWPE 120 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lVP~GnA~~~~~~~~f~CQHGp~EC~gN~iqaCai~~~~~ 120 (255)
..+|.|.+|+...||.|..|.. .|.++.+ +..+.|.++.+|+... .+. . ...+.-.|+-..
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~-~l~~l~~-~~~~~v~~~~~p~~~~----~~s-------~---~a~~a~~~a~~~--- 84 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDS-KLQAWGA-RQAKDVRFTLVPAVFG----GVW-------D---PFARAYLAADVL--- 84 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHH-HHHHHHH-TSCTTEEEEEEECCCS----TTH-------H---HHHHHHHHHHHT---
T ss_pred CCCeEEEEEECCCChhHhhhhH-HHHHHHH-hcCCceEEEEeCcccC----CCc-------H---HHHHHHHHHHHc---
Confidence 5789999999999999999964 4666655 4666688888887321 110 0 111122222211
Q ss_pred ccchhhhhhhcccc----CC---CCCCchhhHHHHhHhhcCCChhhhhhhhcCchhHHHHHHHHHHhhhcCCCCceeeEE
Q 043871 121 QLLHFTFIKCLEET----SW---GPTLDKEKVWRTCCQNLKLSPNLIKDCYDNGTGRWLELIYAAETERLKPPIQFVPWL 193 (255)
Q Consensus 121 ~~~~l~fI~Cm~~~----~~---~~~~~~~~~~~~Ca~~~gl~~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI 193 (255)
...++|..-+... .. .. .........+++.|+|.+.+.+|.++......+.+..+....+ +++-+|++
T Consensus 85 -~~~~~~~~~lf~~~~~~~~~~~~~--~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~--gv~gtPt~ 159 (193)
T 2rem_A 85 -GVAKRSHTAMFEAIHEKGSVPIQN--VGPDELAVFYAGYGVQPDRFVATFNGPEVEKRFQAARAYALKV--RPVGTPTI 159 (193)
T ss_dssp -TCHHHHHHHHHHHHHTTCCSCSTT--CCHHHHHHHHHTTTCCHHHHHHHHTSHHHHHHHHHHHHHHHHH--CCSSSSEE
T ss_pred -CcHHHHHHHHHHHHHHhcccCcCC--CCHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHh--CCCCCCeE
Confidence 2234444333321 11 11 2345667889999999999999999988888888777777666 68999999
Q ss_pred EECCeec-C-cchhcHHHHH
Q 043871 194 TLNGDAV-G-PDYGNFVKYV 211 (255)
Q Consensus 194 ~iNG~~~-~-~~~~nL~~~I 211 (255)
+|||+.. . .....|.+.|
T Consensus 160 ving~~~~~g~~~~~l~~~i 179 (193)
T 2rem_A 160 VVNGRYMVTGHDFEDTLRIT 179 (193)
T ss_dssp EETTTEEECCSSHHHHHHHH
T ss_pred EECCEEEecCCCHHHHHHHH
Confidence 9999864 2 1234455444
No 6
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.33 E-value=1.4e-05 Score=66.39 Aligned_cols=136 Identities=8% Similarity=-0.049 Sum_probs=89.1
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccCceEEEEEeeeeceeecCCcceeecCChhhhhcchhhhhhhhccc
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTSIVNLRLIPWGKAQIVEPNETIVCEHGEDECYFNVIHACAIKAWP 119 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lVP~GnA~~~~~~~~f~CQHGp~EC~gN~iqaCai~~~~ 119 (255)
...+|.|.+|+...||.|++|. ..|..+.+ .+.+.+.|..+|.-.. .+. =...+.-.|+...-
T Consensus 23 ~~~~~~vv~f~d~~Cp~C~~~~-~~l~~l~~-~~~~~v~~~~~~~~~~----~~s----------~~aa~a~~aa~~~g- 85 (195)
T 3hd5_A 23 TPGKIEVLEFFAYTCPHCAAIE-PMVEDWAK-TAPQDVVLKQVPIAFN----AGM----------KPLQQLYYTLQALE- 85 (195)
T ss_dssp STTCEEEEEEECTTCHHHHHHH-HHHHHHHH-TCCTTEEEEEEECCSS----GGG----------HHHHHHHHHHHHTT-
T ss_pred CCCCeEEEEEECCCCccHHHhh-HHHHHHHH-HCCCCeEEEEEecccC----cch----------HHHHHHHHHHHhcC-
Confidence 5688999999999999999995 33444443 5666677777775321 000 01112222222111
Q ss_pred cccchhhhhhhccc----cCCCCCCchhhHHHHhHhhcCCChhhhhhhhcCchhHHHHHHHHHHhhhcCCCCceeeEEEE
Q 043871 120 EQLLHFTFIKCLEE----TSWGPTLDKEKVWRTCCQNLKLSPNLIKDCYDNGTGRWLELIYAAETERLKPPIQFVPWLTL 195 (255)
Q Consensus 120 ~~~~~l~fI~Cm~~----~~~~~~~~~~~~~~~Ca~~~gl~~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~i 195 (255)
.++|..=+.. ..... .........+++.|+|.+.+.+|.++.+.+..+.+..+....+ ++.-+|+++|
T Consensus 86 ----~~~~~~~lf~~~~~~~~~~--~~~~~l~~~a~~~Gld~~~~~~~~~s~~~~~~v~~~~~~a~~~--gv~gtPt~vi 157 (195)
T 3hd5_A 86 ----RPDLHPKVFTAIHTERKRL--FDKKAMGEWAASQGVDRAKFDSVFDSFSVQTQVQRASQLAEAA--HIDGTPAFAV 157 (195)
T ss_dssp ----CTTHHHHHHHHHHTSCCCC--CSHHHHHHHHHHTTCCHHHHHHHHTCHHHHHHHHHHHHHHHHT--TCCSSSEEEE
T ss_pred ----HHHHHHHHHHHHHHhccCC--CCHHHHHHHHHHhCCCHHHHHHHHcCHHHHHHHHHHHHHHHHh--CCCcCceEEE
Confidence 1222222211 11122 2345677889999999999999999999898888888888776 6899999999
Q ss_pred CCeec
Q 043871 196 NGDAV 200 (255)
Q Consensus 196 NG~~~ 200 (255)
||+..
T Consensus 158 ng~~~ 162 (195)
T 3hd5_A 158 GGRYM 162 (195)
T ss_dssp TTTEE
T ss_pred CCEEE
Confidence 99974
No 7
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=98.33 E-value=8.7e-06 Score=66.11 Aligned_cols=153 Identities=10% Similarity=0.047 Sum_probs=90.4
Q ss_pred CCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccCceEEEEEeeeeceeecCCcceeecCChhhhhcchhhhhhhhcccc
Q 043871 41 DEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTSIVNLRLIPWGKAQIVEPNETIVCEHGEDECYFNVIHACAIKAWPE 120 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lVP~GnA~~~~~~~~f~CQHGp~EC~gN~iqaCai~~~~~ 120 (255)
..++.|..|+.=.||+|++|- ..+.++.+ +..+.+.+.++|+--.. ++..=..-+..+|+...-..
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~-~~~~~l~~-~~~~~~~~~~~~~~~~~------------~~~~~~~a~a~~~~~~~~~~ 85 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFE-PIIAQLKQ-QLPEGAKFQKNHVSFMG------------GNMGQAMSKAYATMIALEVE 85 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHH-HHHHHHHH-TSCTTCEEEEEECSSSS------------GGGHHHHHHHHHHHHHHTCH
T ss_pred CCCCEEEEEECCCCHhHHHHh-HHHHHHHh-hcCCceEEEEEecCCCC------------CchHHHHHHHHHHHHHcCcH
Confidence 356778889999999999994 45666655 57777777776652210 00000001111222211111
Q ss_pred ccchhhhhhhccccCCCCCCchhhHHHHhHhhcCCChhhhhhhhcCchhHHHHHHHHHHhhhcCCCCceeeEEEECCeec
Q 043871 121 QLLHFTFIKCLEETSWGPTLDKEKVWRTCCQNLKLSPNLIKDCYDNGTGRWLELIYAAETERLKPPIQFVPWLTLNGDAV 200 (255)
Q Consensus 121 ~~~~l~fI~Cm~~~~~~~~~~~~~~~~~Ca~~~gl~~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iNG~~~ 200 (255)
...+..+..=+....... ........=+...|+|.+.+.+|.++..-...+.+..+....+ +++-+|+++|||++.
T Consensus 86 ~~~~~~~~~~~~~~~~~~--~~~~~l~~~a~~~Gld~~~~~~~~~s~~~~~~v~~~~~~a~~~--gv~gTPtfiINGky~ 161 (184)
T 4dvc_A 86 DKMVPVMFNRIHTLRKPP--KDEQELRQIFLDEGIDAAKFDAAYNGFAVDSMVHRFDKQFQDS--GLTGVPAVVVNNRYL 161 (184)
T ss_dssp HHHHHHHHHHHHTSCCCC--SSHHHHHHHHHTTTCCHHHHHHHHTSHHHHHHHHHHHHHHHHH--TCCSSSEEEETTTEE
T ss_pred HHHHHHHHHHHHHHhhcc--chHHHHHHHHHHhCCCHHHHHHHHhCHHHHHHHHHHHHHHHHc--CCCcCCEEEECCEEe
Confidence 111111111111111111 2344556678889999999999999988888888877777776 689999999999864
Q ss_pred C-----cchhcHHHHH
Q 043871 201 G-----PDYGNFVKYV 211 (255)
Q Consensus 201 ~-----~~~~nL~~~I 211 (255)
- ..+++|.+.|
T Consensus 162 v~~~~~~s~e~~~~~i 177 (184)
T 4dvc_A 162 VQGQSAKSLDEYFDLV 177 (184)
T ss_dssp ECGGGCSSHHHHHHHH
T ss_pred eCCcCCCCHHHHHHHH
Confidence 2 1245566555
No 8
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=98.30 E-value=7.7e-06 Score=71.14 Aligned_cols=154 Identities=10% Similarity=0.022 Sum_probs=100.1
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhcc--CceEEEEEeeeeceeecCCcceeecCChhhhhcchhhhhhhhc
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLT--SIVNLRLIPWGKAQIVEPNETIVCEHGEDECYFNVIHACAIKA 117 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~--d~vdl~lVP~GnA~~~~~~~~f~CQHGp~EC~gN~iqaCai~~ 117 (255)
.+.+|.|.+|..=.||+|++|-. .+.|.+.+++. ..|.|.+.+|--. +.--.+-+.-.|+
T Consensus 37 ~~A~vtIvef~Dy~CP~C~~~~~-~~~~~l~~~~~~~g~V~~v~~~~p~~--------------~~s~~Aa~aa~aa--- 98 (226)
T 3f4s_A 37 PKAPILMIEYASLTCYHCSLFHR-NVFPKIKEKYIDTGKMLYIFRHFPLD--------------YRGLKAAMLSHCY--- 98 (226)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHH-HTHHHHHHHHTTTTSEEEEEEECCCS--------------HHHHHHHHHGGGC---
T ss_pred CCCCEEEEEEECCCCHHHHHHHH-HHHHHHHHHcccCCeEEEEEEeCCCC--------------hhHHHHHHHHHHh---
Confidence 56789999999999999999954 35565543342 3566666655210 1111122223333
Q ss_pred cccccchhhhhhhccccCCCCC---CchhhHHHHhHhhcCCChhhhhhhhcCchhHHHHHHHHHHhhh-cCCCCceeeEE
Q 043871 118 WPEQLLHFTFIKCLEETSWGPT---LDKEKVWRTCCQNLKLSPNLIKDCYDNGTGRWLELIYAAETER-LKPPIQFVPWL 193 (255)
Q Consensus 118 ~~~~~~~l~fI~Cm~~~~~~~~---~~~~~~~~~Ca~~~gl~~~~I~~C~~s~~G~~Ll~~~~~~T~~-l~P~~~~VPwI 193 (255)
.++..+++|..=+........ ..........++..|+|.+.+.+|.++......+.+..+.... + +++-+|++
T Consensus 99 -~~~~~f~~~~~aLF~~q~~~~~~~~~~~~~L~~iA~~~Gld~~~~~~~l~s~~~~~~v~~~~~~a~~~~--GV~GtPtf 175 (226)
T 3f4s_A 99 -EKQEDYFNFNKAVFNSIDSWNYYNLSDLTLLQRIAALSNLKQDAFNQCINDKKIMDKIVNDKSLAINKL--GITAVPIF 175 (226)
T ss_dssp -CSHHHHHHHHHHHHHTGGGSCSSSTTCCHHHHHHHHHTTCCHHHHHHHHTCHHHHHHHHHHHHHHHHHH--CCCSSCEE
T ss_pred -hChHHHHHHHHHHHHhCHhhcccccCcHHHHHHHHHHcCCCHHHHHHHHhCHHHHHHHHHHHHHHHHHc--CCCcCCEE
Confidence 234556777666653211110 0134567788999999999999999998888877777777666 6 68999999
Q ss_pred EE---CCeecCc--c--------hhcHHHHHHHh
Q 043871 194 TL---NGDAVGP--D--------YGNFVKYVCEA 214 (255)
Q Consensus 194 ~i---NG~~~~~--~--------~~nL~~~IC~~ 214 (255)
+| ||+.+.. . ...|.+.|=..
T Consensus 176 vv~~~nG~~~~Ga~~~~~~G~~~~e~l~~~I~~~ 209 (226)
T 3f4s_A 176 FIKLNDDKSYIEHNKVKHGGYKELKYFTNVIDKL 209 (226)
T ss_dssp EEEECCTTCCCCGGGGEEESCCCHHHHHHHHHHH
T ss_pred EEEcCCCEEeeCCCCcccccccCHHHHHHHHHHH
Confidence 99 9997642 2 45666665443
No 9
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=98.19 E-value=3.3e-05 Score=64.81 Aligned_cols=152 Identities=13% Similarity=0.062 Sum_probs=92.2
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccCceEEEEEeeeeceeecCCcceeecCChhhhhcchhhhhhhhccc
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTSIVNLRLIPWGKAQIVEPNETIVCEHGEDECYFNVIHACAIKAWP 119 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lVP~GnA~~~~~~~~f~CQHGp~EC~gN~iqaCai~~~~ 119 (255)
...+|.|..|+.-.||.|++|- ..|..+.+ ++.+.+.|..+|.... |.. =...+.-.|+...-.
T Consensus 22 ~~~~v~vv~f~d~~Cp~C~~~~-~~l~~~~~-~~~~~v~~~~~p~~~~-------------~~~-~~aa~a~~aa~~~g~ 85 (193)
T 3hz8_A 22 QAGKVEVLEFFGYFCPHCAHLE-PVLSKHAK-SFKDDMYLRTEHVVWQ-------------KEM-LTLARLAAAVDMAAA 85 (193)
T ss_dssp STTSEEEEEEECTTCHHHHHHH-HHHHHHHT-TCCTTEEEEEEECCCS-------------GGG-HHHHHHHHHHHHHTG
T ss_pred CCCCcEEEEEECCCChhHHHHH-HHHHHHHH-HCCCCeEEEEecCCCC-------------ccc-HHHHHHHHHHHHcCc
Confidence 4578999999999999999995 34444433 5667677777776321 111 011222233322211
Q ss_pred ccc--chhhhhhhccccCCCCCCchhhHHHHhHhhc-CCChhhhhhhhcCchhHHHHHHHHHHhhhcCCCCceeeEEEEC
Q 043871 120 EQL--LHFTFIKCLEETSWGPTLDKEKVWRTCCQNL-KLSPNLIKDCYDNGTGRWLELIYAAETERLKPPIQFVPWLTLN 196 (255)
Q Consensus 120 ~~~--~~l~fI~Cm~~~~~~~~~~~~~~~~~Ca~~~-gl~~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iN 196 (255)
... ..-.+..=+....... ........-+.+. |+|.+.+.+|.++......+.+..+....+ +++-+|+++||
T Consensus 86 ~~~~~~~~~lf~a~~~~~~~~--~~~~~l~~~a~~~~Gld~~~~~~~~~s~~~~~~v~~~~~~a~~~--gv~gtPt~vvn 161 (193)
T 3hz8_A 86 DSKDVANSHIFDAMVNQKIKL--QNPEVLKKWLGEQTAFDGKKVLAAYESPESQARADKMQELTETF--QIDGVPTVIVG 161 (193)
T ss_dssp GGHHHHHHHHHHHHHTSCCCT--TSHHHHHHHHHHCTTTTHHHHHHHHHSHHHHHHHHHHHHHHHHT--TCCSSSEEEET
T ss_pred hhHHhHHHHHHHHHHHhCcCC--CCHHHHHHHHHHccCCCHHHHHHHHcCHHHHHHHHHHHHHHHHh--CCCcCCEEEEC
Confidence 100 0000111111111122 2345567788888 999999999999988888888887777766 68999999999
Q ss_pred CeecCc--chhcHHHHH
Q 043871 197 GDAVGP--DYGNFVKYV 211 (255)
Q Consensus 197 G~~~~~--~~~nL~~~I 211 (255)
|++... ....|.+.|
T Consensus 162 g~~~~~~~~~e~l~~~i 178 (193)
T 3hz8_A 162 GKYKVEFADWESGMNTI 178 (193)
T ss_dssp TTEEECCSSHHHHHHHH
T ss_pred CEEEecCCCHHHHHHHH
Confidence 997532 334454444
No 10
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.18 E-value=9.9e-06 Score=67.03 Aligned_cols=136 Identities=15% Similarity=0.053 Sum_probs=90.7
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccCceEEEEEeeeeceeecCCcceeecCChhhhhcchhhhhhhhccc
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTSIVNLRLIPWGKAQIVEPNETIVCEHGEDECYFNVIHACAIKAWP 119 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lVP~GnA~~~~~~~~f~CQHGp~EC~gN~iqaCai~~~~ 119 (255)
...+|.|.+|+...||+|.+|.. .|..+.+ ...+.+.++.+|.... +.. -...+.-.|+-.
T Consensus 20 ~~~~~~i~~f~d~~Cp~C~~~~~-~l~~l~~-~~~~~v~~~~~p~~~~-------------~~s-~~aa~a~~aa~~--- 80 (195)
T 2znm_A 20 QSGKIEVLEFFGYFCVHCHHFDP-LLLKLGK-ALPSDAYLRTEHVVWQ-------------PEM-LGLARMAAAVNL--- 80 (195)
T ss_dssp SSSSEEEEEEECTTSCCTTSSCH-HHHHHHH-HSCTTEEEEEEECCCS-------------GGG-HHHHHHHHHHHH---
T ss_pred CCCCcEEEEEECCCChhHHHHhH-HHHHHHH-HCCCceEEEEeccccC-------------ccc-HHHHHHHHHHHH---
Confidence 45789999999999999999964 4666555 4556678888775211 000 011222223321
Q ss_pred cccchhhhhhhcccc----CCCCCCchhhHHHHhHhhc-CCChhhhhhhhcCchhHHHHHHHHHHhhhcCCCCceeeEEE
Q 043871 120 EQLLHFTFIKCLEET----SWGPTLDKEKVWRTCCQNL-KLSPNLIKDCYDNGTGRWLELIYAAETERLKPPIQFVPWLT 194 (255)
Q Consensus 120 ~~~~~l~fI~Cm~~~----~~~~~~~~~~~~~~Ca~~~-gl~~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~ 194 (255)
....+.|..-+... .... .........+++. |++.+.+.+|.++.+....+.+..+....+ ++.-+|+++
T Consensus 81 -~~~~~~~~~~lf~~~~~~~~~~--~~~~~l~~~a~~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~--gv~gtPt~v 155 (195)
T 2znm_A 81 -SGLKYQANPAVFKAVYEQKIRL--ENRSVAGKWALSQKGFDGKKLMRAYDSPEAAAAALKMQKLTEQY--RIDSTPTVI 155 (195)
T ss_dssp -HTCHHHHHHHHHHHHHHCSSCT--TSHHHHHHHHHTCSSSCHHHHHHHHTSHHHHHHHHHHHHHHHHT--TCCSSSEEE
T ss_pred -cCcHHHHHHHHHHHHHHhCCCC--CCHHHHHHHHHHcCCCCHHHHHHHhcCHHHHHHHHHHHHHHHHc--CCCCCCeEE
Confidence 12344555444321 1111 2345667888999 999999999999988888888877777766 689999999
Q ss_pred ECCee
Q 043871 195 LNGDA 199 (255)
Q Consensus 195 iNG~~ 199 (255)
|||+.
T Consensus 156 ing~~ 160 (195)
T 2znm_A 156 VGGKY 160 (195)
T ss_dssp ETTTE
T ss_pred ECCEE
Confidence 99986
No 11
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=98.16 E-value=1.6e-05 Score=68.18 Aligned_cols=153 Identities=10% Similarity=0.106 Sum_probs=101.9
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhc--cCceEEEEEeeeeceeecCCcceeecCChhhhhcchhhhhhhhc
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDL--TSIVNLRLIPWGKAQIVEPNETIVCEHGEDECYFNVIHACAIKA 117 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l--~d~vdl~lVP~GnA~~~~~~~~f~CQHGp~EC~gN~iqaCai~~ 117 (255)
.+.+|.|.+|..-.||+|++|- ..+.|.+.+++ .+.|.|.+.+|- . |+... .+-..-.|+
T Consensus 13 ~~a~vtivef~D~~Cp~C~~~~-~~~~~~l~~~~i~~g~v~~v~r~~p---l----------~~~s~-~aa~aa~~~--- 74 (205)
T 3gmf_A 13 PAAKLRLVEFVSYTCPHCSHFE-IESEGQLKIGMVQPGKGAIEVRNFV---R----------DPIDM-TVALITNCV--- 74 (205)
T ss_dssp TTCSEEEEEEECTTCHHHHHHH-HHHHHHHHHHTTTTTSEEEEEEECC---C----------SHHHH-HHHHHHHHS---
T ss_pred CCCCeEEEEEECCCCHHHHHHH-HHHHHHHHHHhccCCeEEEEEEeCC---C----------CcchH-HHHHHHHhc---
Confidence 5688999999999999999996 45778776334 356777766661 1 11111 122222343
Q ss_pred cccccchhhhhhhccccCC-------CCCCch-------------------hhHHHHhHhhcCCChhhhhhhhcCchhHH
Q 043871 118 WPEQLLHFTFIKCLEETSW-------GPTLDK-------------------EKVWRTCCQNLKLSPNLIKDCYDNGTGRW 171 (255)
Q Consensus 118 ~~~~~~~l~fI~Cm~~~~~-------~~~~~~-------------------~~~~~~Ca~~~gl~~~~I~~C~~s~~G~~ 171 (255)
.+.++++|..=++.... ... +. .......+...|+|.+.+.+|.++.....
T Consensus 75 --~~~~f~~~~~~Lf~~q~~~~~~~~~~~-~~~~~~w~~~~~~~~l~~ia~~~~L~~~a~~~Gld~~~~~~~l~s~~~~~ 151 (205)
T 3gmf_A 75 --PPSRFFTLHTAFMRSQAQWIGPLANST-EAQRQRWFNGTFATRTRAIASDFRFYDFMAARGMDRSTLDRCLSNEALAK 151 (205)
T ss_dssp --CHHHHHHHHHHHHHTHHHHCHHHHHCC-HHHHHTTSSSCHHHHHHHHHHHTTHHHHHHTTTCCHHHHHHHHTCHHHHH
T ss_pred --CHhHHHHHHHHHHHcCHHHHhcccccc-hhhhhccccchhHHHHHhccCHHHHHHHHHHcCCCHHHHHHHHcCHHHHH
Confidence 35678888887764321 010 00 01245678889999999999999988777
Q ss_pred HHHHHHHHh-hhcCCCCceeeEEEECCeecCc--chhcHHHHHHHhc
Q 043871 172 LELIYAAET-ERLKPPIQFVPWLTLNGDAVGP--DYGNFVKYVCEAY 215 (255)
Q Consensus 172 Ll~~~~~~T-~~l~P~~~~VPwI~iNG~~~~~--~~~nL~~~IC~~y 215 (255)
.+.+..+.. ..+ +++-+|+++|||+.+.- ....|.+.|=...
T Consensus 152 ~v~~~~~~a~~~~--GV~GtPtfvvng~~~~G~~~~e~l~~~i~~~~ 196 (205)
T 3gmf_A 152 KLAAETDEAINQY--NVSGTPSFMIDGILLAGTHDWASLRPQILARL 196 (205)
T ss_dssp HHHHHHHHHHHHH--CCCSSSEEEETTEECTTCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc--CCccCCEEEECCEEEeCCCCHHHHHHHHHHHh
Confidence 777766666 665 68999999999998652 3567777665443
No 12
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=97.84 E-value=0.00012 Score=61.28 Aligned_cols=167 Identities=10% Similarity=0.069 Sum_probs=98.8
Q ss_pred CceEEEEEEEeCChhHHHHHHHhhHHHHHhhccC-ceEEEEEeeeeceeecCC-------------------cceeecCC
Q 043871 42 EKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTS-IVNLRLIPWGKAQIVEPN-------------------ETIVCEHG 101 (255)
Q Consensus 42 ~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d-~vdl~lVP~GnA~~~~~~-------------------~~f~CQHG 101 (255)
++|+|++|+.-.||.|..+ .++.+.+.. +.+ -++|+++||+-....... .++.-...
T Consensus 6 ~~~~I~~f~D~~CP~C~~~--~~~~~~l~~-~~~~~v~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~a~~~g~~~~~~ 82 (216)
T 2in3_A 6 EKPVLWYIADPMCSWCWGF--APVIENIRQ-EYSAFLTVKIMPGGLRPGTNTPLLPEKRAQILHHWHSVHITTGQPFTFE 82 (216)
T ss_dssp CCCEEEEEECTTCHHHHHH--HHHHHHHHH-HHTTTCEEEEEECC----CCSBCCHHHHHHHHHHHHHHHHHHCCCCCCT
T ss_pred cceeEEEEECCCCchhhcc--hHHHHHHHh-cCCCCeEEEEeecccccCCCCCCCHHHHHHHHHHHHHHHHHHCCccChH
Confidence 4589999999999999833 455565553 333 489999998754211000 00000000
Q ss_pred ---hhhhhcchhhhhhhhcc-cc--ccchhhhhhhcccc----CCCCCCchhhHHHHhHhhcCCChhhhhhhhcCchhHH
Q 043871 102 ---EDECYFNVIHACAIKAW-PE--QLLHFTFIKCLEET----SWGPTLDKEKVWRTCCQNLKLSPNLIKDCYDNGTGRW 171 (255)
Q Consensus 102 ---p~EC~gN~iqaCai~~~-~~--~~~~l~fI~Cm~~~----~~~~~~~~~~~~~~Ca~~~gl~~~~I~~C~~s~~G~~ 171 (255)
+..=..|...++.+-.. .. +...++|..=+... +..+ .........+++.|+|.+.+.+|.++.+.+.
T Consensus 83 ~~~~~~~~~~s~~a~r~~~~a~~~~~~~~~~~~~~lf~a~~~~~~~~--~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~ 160 (216)
T 2in3_A 83 NALPEGFIYDTEPACRGVVSVSLIEPEKVFPFFAAIQRAFYVGQEDV--AQLAILKKLAVDLGIPESRFTPVFQSDEAKQ 160 (216)
T ss_dssp TCSCTTCBCCCHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHTTCCCT--TSHHHHHHHHHHTTCCHHHHHHHHHSHHHHH
T ss_pred HHccCCcccCcHHHHHHHHHHHHhCcchHHHHHHHHHHHHHhcCCCC--CCHHHHHHHHHHcCCCHHHHHHHhcchHHHH
Confidence 01112233333322111 11 14456666655531 2222 2345667889999999999999999988888
Q ss_pred HHHHHHHHhhhcCCCCceeeEEEE--CCee---cC--cchhcHHHHHHHhc
Q 043871 172 LELIYAAETERLKPPIQFVPWLTL--NGDA---VG--PDYGNFVKYVCEAY 215 (255)
Q Consensus 172 Ll~~~~~~T~~l~P~~~~VPwI~i--NG~~---~~--~~~~nL~~~IC~~y 215 (255)
.+.+..+....+ ++.-+|+++| ||++ .. .....|...+=...
T Consensus 161 ~v~~~~~~a~~~--gv~g~Pt~~i~~~G~~~~~~~G~~~~~~l~~~l~~~~ 209 (216)
T 2in3_A 161 RTLAGFQRVAQW--GISGFPALVVESGTDRYLITTGYRPIEALRQLLDTWL 209 (216)
T ss_dssp HHHHHHHHHHHT--TCCSSSEEEEEETTEEEEEESSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc--CCcccceEEEEECCEEEEeccCCCCHHHHHHHHHHHH
Confidence 888877777665 6899999998 9986 22 22455666554433
No 13
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=97.82 E-value=0.00013 Score=60.93 Aligned_cols=139 Identities=8% Similarity=-0.050 Sum_probs=87.2
Q ss_pred ceEEEEEEEeCChhHHHHHHHh-hHHHHHhhccCceEEEEEeeeeceeecCCcceeecCChhhhhcchhhhhhhhccccc
Q 043871 43 KVNLSVYYESLSDTGAEFITHD-LGKVFEKDLTSIVNLRLIPWGKAQIVEPNETIVCEHGEDECYFNVIHACAIKAWPEQ 121 (255)
Q Consensus 43 kV~V~vYyESlCPd~~~Fi~~q-L~P~~~~~l~d~vdl~lVP~GnA~~~~~~~~f~CQHGp~EC~gN~iqaCai~~~~~~ 121 (255)
++.|..|+--.||.|++|-... +.+.+.+.+.+.+.|.++|+--- .+.. . ..-+.-.|+...- ..
T Consensus 15 ~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~~~s-------~---~aa~a~~aA~~~g-~~ 80 (189)
T 3l9v_A 15 APAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQGSRMVKYHVSLL---GPLG-------H---ELTRAWALAMVMK-ET 80 (189)
T ss_dssp CCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCTTCCEEEEECSSS---STTH-------H---HHHHHHHHHHHHT-CH
T ss_pred CCEEEEEECCCChhHHHHhHhccchHHHHHhCCCCCEEEEEechhc---cccc-------H---HHHHHHHHHHHcC-cH
Confidence 5678889999999999995432 34666555666677777776321 0110 0 1111122333221 11
Q ss_pred cchh-hhhhhccccCCCCCCchhhHHHHhHhhc-CCChhhhhhhhcCchhHHHHHHHHHHhhhcCCCCceeeEEEECCee
Q 043871 122 LLHF-TFIKCLEETSWGPTLDKEKVWRTCCQNL-KLSPNLIKDCYDNGTGRWLELIYAAETERLKPPIQFVPWLTLNGDA 199 (255)
Q Consensus 122 ~~~l-~fI~Cm~~~~~~~~~~~~~~~~~Ca~~~-gl~~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iNG~~ 199 (255)
.... .+..=+..... . .........+.+. |+|.+.+.+|.++......+.+..+....+ +++-+|+++|||++
T Consensus 81 ~~~~~~lf~a~~~~~~-~--~~~~~l~~~a~~~~Gld~~~~~~~~~s~~~~~~v~~~~~~a~~~--gv~GtPt~~vng~~ 155 (189)
T 3l9v_A 81 DVIEKAFFTAGMVEKR-L--HSPDDVRRVFMSATGISRGEYDRSIKSPAVNDMVALQERLFKEY--GVRGTPSVYVRGRY 155 (189)
T ss_dssp HHHHHHHHHHHTTTCC-C--CSHHHHHHHHHHHHCCCHHHHHHHTTSHHHHHHHHHHHHHHHHT--TCCSSSEEEETTTE
T ss_pred HHHHHHHHHHHhhhcc-C--CCHHHHHHHHHHccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHh--CCCccCEEEECCEE
Confidence 1111 12122221111 2 2345677888899 999999999999988888888887777766 68999999999987
Q ss_pred c
Q 043871 200 V 200 (255)
Q Consensus 200 ~ 200 (255)
.
T Consensus 156 ~ 156 (189)
T 3l9v_A 156 H 156 (189)
T ss_dssp E
T ss_pred E
Confidence 3
No 14
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=97.71 E-value=0.00026 Score=59.54 Aligned_cols=138 Identities=9% Similarity=0.008 Sum_probs=85.7
Q ss_pred CceEEEEEEEeCChhHHHHHHHh-hHHHHHhhccCceEEEEEeeeeceeecCCcceeec-CChhhhhcc--hhhhhhhhc
Q 043871 42 EKVNLSVYYESLSDTGAEFITHD-LGKVFEKDLTSIVNLRLIPWGKAQIVEPNETIVCE-HGEDECYFN--VIHACAIKA 117 (255)
Q Consensus 42 ~kV~V~vYyESlCPd~~~Fi~~q-L~P~~~~~l~d~vdl~lVP~GnA~~~~~~~~f~CQ-HGp~EC~gN--~iqaCai~~ 117 (255)
.+|.|..|+.-.||.|++|-... ..|.+.+.+.+-+.|.++|+--- .+.....-+ .=-.+|.|. +.+.=
T Consensus 21 ~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~~v~~~~~~~~~~---~~~s~~aa~a~~aA~~~g~~~~~~~~---- 93 (191)
T 3l9s_A 21 GEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPEGTKMTKYHVEFL---GPLGKELTQAWAVAMALGVEDKVTVP---- 93 (191)
T ss_dssp SSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCTTCCEEEEECSSS---STTHHHHHHHHHHHHHHTCHHHHHHH----
T ss_pred CCCeEEEEECCCChhHHHhChhccchHHHHHhCCCCcEEEEEecccc---cccCHHHHHHHHHHHHcCcHHHHHHH----
Confidence 37899999999999999995331 23556556776677777776321 001000000 000122221 11100
Q ss_pred cccccchhhhhhhccccCCCCCCchhhHHHHhHhhcCCChhhhhhhhcCchhHHHHHHHHHHhhhcCCCCceeeEEEECC
Q 043871 118 WPEQLLHFTFIKCLEETSWGPTLDKEKVWRTCCQNLKLSPNLIKDCYDNGTGRWLELIYAAETERLKPPIQFVPWLTLNG 197 (255)
Q Consensus 118 ~~~~~~~l~fI~Cm~~~~~~~~~~~~~~~~~Ca~~~gl~~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iNG 197 (255)
.+. .=+.+.. . ........-++..|+|.+.+.+|.++......+.+..+....+ +++-+|+++|||
T Consensus 94 ------lf~--a~~~~~~--~--~~~~~L~~~a~~~Gld~~~~~~~~~s~~~~~~v~~~~~~a~~~--gv~gtPtfvvnG 159 (191)
T 3l9s_A 94 ------LFE--AVQKTQT--V--QSAADIRKVFVDAGVKGEDYDAAWNSFVVKSLVAQQEKAAADL--QLQGVPAMFVNG 159 (191)
T ss_dssp ------HHH--HHHTSCC--C--SSHHHHHHHHHHTTCCHHHHHHHHTSHHHHHHHHHHHHHHHHT--TCCSSSEEEETT
T ss_pred ------HHH--HHHhcCC--C--CCHHHHHHHHHHcCCCHHHHHHHHhCHHHHHHHHHHHHHHHHh--CCcccCEEEECC
Confidence 011 1111111 2 2345677888999999999999999988888888888777776 689999999999
Q ss_pred eec
Q 043871 198 DAV 200 (255)
Q Consensus 198 ~~~ 200 (255)
++.
T Consensus 160 ~~~ 162 (191)
T 3l9s_A 160 KYQ 162 (191)
T ss_dssp TEE
T ss_pred EEE
Confidence 974
No 15
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=97.69 E-value=0.00042 Score=58.10 Aligned_cols=144 Identities=10% Similarity=-0.032 Sum_probs=88.2
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccCceEEEEEeeeeceeecCCcceeecCChhhhhcchhhhhhhhccc
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTSIVNLRLIPWGKAQIVEPNETIVCEHGEDECYFNVIHACAIKAWP 119 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lVP~GnA~~~~~~~~f~CQHGp~EC~gN~iqaCai~~~~ 119 (255)
.+.+|.|.+|..=.||+|++|- ..+.+.+++...+.|.|.+.+|--. -|.... ..-+.-.++-...+
T Consensus 12 g~a~vtiv~f~D~~Cp~C~~~~-~~~~~~l~~~~~g~v~~v~r~~p~~-----------~h~~s~-~aaraa~aa~~~~~ 78 (182)
T 3gn3_A 12 GHGPRLFEVFLEPTCPFSVKAF-FKLDDLLAQAGEDNVTVRIRLQSQP-----------WHMFSG-VIVRCILAAATLEG 78 (182)
T ss_dssp ECCSEEEEEEECTTCHHHHHHH-TTHHHHHHHHCTTTEEEEEEECCCT-----------TSTTHH-HHHHHHHHHTTSTT
T ss_pred CCCCEEEEEEECCCCHhHHHHH-HHHHHHHHHhCCCCEEEEEEEcCCC-----------CCccHH-HHHHHHHHHHHhcc
Confidence 3678999999999999999995 5677777642355677776665211 011110 01111111221111
Q ss_pred cccchhhhhhhccccCCCCC---------C--chhhHHHHhHhhcCCChhhhhhhhcCchhHHHHHHHHHHhhhcCCCCc
Q 043871 120 EQLLHFTFIKCLEETSWGPT---------L--DKEKVWRTCCQNLKLSPNLIKDCYDNGTGRWLELIYAAETERLKPPIQ 188 (255)
Q Consensus 120 ~~~~~l~fI~Cm~~~~~~~~---------~--~~~~~~~~Ca~~~gl~~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~ 188 (255)
....+++|..-+........ + +.......-++..|+|.+.+ .++.+-..-+.+..+....+ +++
T Consensus 79 ~~~~f~~~~~aLf~~q~~~~~~~~~~~~~~~~~~~~~l~~~a~~~Gld~~~~---l~~~~~~~~v~~~~~~a~~~--GV~ 153 (182)
T 3gn3_A 79 GKESAKAVMTAVASHREEFEFEHHAGGPNLDATPNDIIARIERYSGLALAEA---FANPELEHAVKWHTKYARQN--GIH 153 (182)
T ss_dssp HHHHHHHHHHHHHHTGGGGSCBTTTBSGGGGCCHHHHHHHHHHHHTCCCHHH---HHCGGGHHHHHHHHHHHHHH--TCC
T ss_pred ChHHHHHHHHHHHhcCcccccccccccccCCCCHHHHHHHHHHHhCCCHHHH---hcChHHHHHHHHHHHHHHHC--CCC
Confidence 22567888887764321110 0 23445677888899998776 45666666666655555555 689
Q ss_pred eeeEEEECCeecC
Q 043871 189 FVPWLTLNGDAVG 201 (255)
Q Consensus 189 ~VPwI~iNG~~~~ 201 (255)
-+|+++|||+...
T Consensus 154 gtPtf~ing~~~~ 166 (182)
T 3gn3_A 154 VSPTFMINGLVQP 166 (182)
T ss_dssp SSSEEEETTEECT
T ss_pred ccCEEEECCEEcc
Confidence 9999999999863
No 16
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=97.67 E-value=0.00027 Score=59.27 Aligned_cols=160 Identities=10% Similarity=0.007 Sum_probs=97.8
Q ss_pred eEEEEEEEeCChhHHHHHHHhhHHHHHhhccCceEEEEEeee---eceee--cCCc----------------------ce
Q 043871 44 VNLSVYYESLSDTGAEFITHDLGKVFEKDLTSIVNLRLIPWG---KAQIV--EPNE----------------------TI 96 (255)
Q Consensus 44 V~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lVP~G---nA~~~--~~~~----------------------~f 96 (255)
++|++|+.-.||+|..+. ..|..+.. ... ++|++.||- ..... .... ++
T Consensus 1 m~I~~~~D~~CP~cy~~~-~~l~~~~~-~~~--~~v~~~p~~L~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~a~~~G~ 76 (203)
T 2imf_A 1 MIVDFYFDFLSPFSYLAN-QRLSKLAQ-DYG--LTIRYNAIDLARVKIAIGNVGPSNRDLKVKLDYLKVDLQRWAQLYGI 76 (203)
T ss_dssp CEEEEEECTTCHHHHHHH-HHHHHHHH-HHC--CEEEEEECCHHHHHHHHTCCSCCGGGCHHHHHHHHHHHHHHHHHHTC
T ss_pred CeEEEEEeCCCHHHHHHH-HHHHHHHH-HcC--CeEEEEeeecchhhHhhCCCCcccccChHHHHHHHHHHHHHHHHcCC
Confidence 479999999999998774 44555554 232 788888882 11000 0000 01
Q ss_pred eecCChhhhhcchhhhhhhhcc-ccccchhhhhhhcccc----CCCCCCchhhHHHHhHhhcCCChhhhhhhhcCchhHH
Q 043871 97 VCEHGEDECYFNVIHACAIKAW-PEQLLHFTFIKCLEET----SWGPTLDKEKVWRTCCQNLKLSPNLIKDCYDNGTGRW 171 (255)
Q Consensus 97 ~CQHGp~EC~gN~iqaCai~~~-~~~~~~l~fI~Cm~~~----~~~~~~~~~~~~~~Ca~~~gl~~~~I~~C~~s~~G~~ 171 (255)
.-.. +. ..|...++.+-.. ..+...++|..=+... ..++ +........+++.|+|.+.+.+|.++.+.+.
T Consensus 77 ~~~~-~~--~~~t~~a~r~~~~a~~~g~~~~~~~~lf~a~~~~~~~i--~~~~~L~~~a~~~Gld~~~~~~~~~s~~~~~ 151 (203)
T 2imf_A 77 PLVF-PA--NYNSRRMNIGFYYSGAEAQAAAYVNVVFNAVWGEGIAP--DLESLPALVSEKLGWDRSAFEHFLSSNAATE 151 (203)
T ss_dssp CCCC-CS--CCCCHHHHHHGGGCCSHHHHHHHHHHHHHHHHHSCCCT--TCTTHHHHHHHHHTCCHHHHHHHHHSHHHHH
T ss_pred CCCC-CC--CCChHHHHHHHHHHhCcChHHHHHHHHHHHHHcCCCCC--CCHHHHHHHHHHcCCCHHHHHHHhcCHHHHH
Confidence 1111 11 4455444433222 2233455555555432 2222 2345667889999999999999999988888
Q ss_pred HHHHHHHHhhhcCCCCceeeEEEECCeecC--cchhcHHHHHHHh
Q 043871 172 LELIYAAETERLKPPIQFVPWLTLNGDAVG--PDYGNFVKYVCEA 214 (255)
Q Consensus 172 Ll~~~~~~T~~l~P~~~~VPwI~iNG~~~~--~~~~nL~~~IC~~ 214 (255)
.+.+..+....+ ++.-+|+++|||+... +....|...+-..
T Consensus 152 ~v~~~~~~a~~~--Gv~G~Ptfvi~g~~~~G~~~~~~l~~~l~~~ 194 (203)
T 2imf_A 152 RYDEQTHAAIER--KVFGVPTMFLGDEMWWGNDRLFMLESAMGRL 194 (203)
T ss_dssp HHHHHHHHHHHT--TCCSSSEEEETTEEEESGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHC--CCCcCCEEEECCEEEECCCCHHHHHHHHhcc
Confidence 888877777665 7899999999998653 2345566655543
No 17
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=97.66 E-value=0.00014 Score=59.58 Aligned_cols=66 Identities=14% Similarity=0.024 Sum_probs=49.0
Q ss_pred hHHHHh----HhhcCCChhhhhhhhcCchhHHHHHHHHHHhhhcCCCCceeeEEEECCeec-C----cchhcHHHHH
Q 043871 144 KVWRTC----CQNLKLSPNLIKDCYDNGTGRWLELIYAAETERLKPPIQFVPWLTLNGDAV-G----PDYGNFVKYV 211 (255)
Q Consensus 144 ~~~~~C----a~~~gl~~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iNG~~~-~----~~~~nL~~~I 211 (255)
...... +++.|+|.+.+.+|.++.+.+..+.+..+....+ ++.-+|+++|||+.. . .....|...|
T Consensus 115 ~~l~~~~~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~--gv~gtPt~~ing~~~~~~~g~~~~~~l~~~i 189 (195)
T 3c7m_A 115 KDPAAFIKTGLDAAGMSQADFEAALKEPAVQETLEKWKASYDVA--KIQGVPAYVVNGKYLIYTKSIKSIDAMADLI 189 (195)
T ss_dssp TCHHHHHHHHHHHHTCCHHHHHHHHTSHHHHHHHHHGGGHHHHH--HHHCSSEEEETTTEEECGGGCCCHHHHHHHH
T ss_pred HHHHHHHHhHHHHcCCCHHHHHHHHcChHHHHHHHHHHHHHHHc--CCCccCEEEECCEEEeccCCCCCHHHHHHHH
Confidence 345677 8899999999999999888777777666555554 579999999999863 2 1345555554
No 18
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.59 E-value=0.00074 Score=54.73 Aligned_cols=143 Identities=15% Similarity=0.108 Sum_probs=79.3
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhc--cCceEEEEEeeeeceeecCCcceeecCChhhhhcchhhhhhhhc
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDL--TSIVNLRLIPWGKAQIVEPNETIVCEHGEDECYFNVIHACAIKA 117 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l--~d~vdl~lVP~GnA~~~~~~~~f~CQHGp~EC~gN~iqaCai~~ 117 (255)
...+|.|.+|+.-.||+|++|.. .+.+.++ ++ .+.|.|.++||.-. .. . +. .++..+.|+..
T Consensus 25 ~~a~v~i~~f~D~~Cp~C~~~~~-~~~~~~~-~~~~~~~v~~~~~~~~~~----~~-~----~~----~a~~~~~~~~~- 88 (175)
T 1z6m_A 25 SNAPVKMIEFINVRCPYCRKWFE-ESEELLA-QSVKSGKVERIIKLFDKE----KE-S----LQ----RGNVMHHYIDY- 88 (175)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHH-HHHHHHH-HHHHTTSEEEEEEECCCC----ST-T----TH----HHHHHHTTCCT-
T ss_pred CCCCeEEEEEECCCCcchHHHHH-HHHHHHH-HHhhCCcEEEEEEeCCCC----cc-c----HH----HHHHHHHHHHh-
Confidence 46789999999999999999964 4677665 45 55688888887432 10 0 00 12223333211
Q ss_pred cccccchhhhhhhccccCCC-CCCchhhHHHHhHhhcCCChhhhhhhhcCchhHHHHHHHHHHhhhcCCCCceeeEEEEC
Q 043871 118 WPEQLLHFTFIKCLEETSWG-PTLDKEKVWRTCCQNLKLSPNLIKDCYDNGTGRWLELIYAAETERLKPPIQFVPWLTLN 196 (255)
Q Consensus 118 ~~~~~~~l~fI~Cm~~~~~~-~~~~~~~~~~~Ca~~~gl~~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iN 196 (255)
.++...++|..=+...... ...+.....+..++..|++.+ .....+.+..+....+ +++-+|+++||
T Consensus 89 -~~~~~~~~~~~~lf~~~~~~~~~~~~~l~~~a~~~~Gld~~---------~~~~~~~~~~~~a~~~--gv~gtPt~vvn 156 (175)
T 1z6m_A 89 -SAPEQALSALHKMFATQDEWGNLTLEEVATYAEKNLGLKEQ---------KDATLVSAVIAEANAA--HIQFVPTIIIG 156 (175)
T ss_dssp -TCHHHHHHHHHHHHHTHHHHTTSCHHHHHHHHHHTSCCCCC---------CCHHHHHHHHHHHHHH--TCCSSCEEEET
T ss_pred -cChHHHHHHHHHHHHcChhhccCCHHHHHHHHHHhcCCCcc---------cCHHHHHHHHHHHHHc--CCCCcCeEEEC
Confidence 2334455555555432100 000122233333456788754 1123344444444444 68999999999
Q ss_pred CeecCc--chhcHHHH
Q 043871 197 GDAVGP--DYGNFVKY 210 (255)
Q Consensus 197 G~~~~~--~~~nL~~~ 210 (255)
|+.+.. ....|...
T Consensus 157 g~~~~G~~~~~~l~~~ 172 (175)
T 1z6m_A 157 EYIFDESVTEEELRGY 172 (175)
T ss_dssp TEEECTTCCHHHHHHH
T ss_pred CEEccCCCCHHHHHHH
Confidence 997642 24455544
No 19
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=97.48 E-value=0.00081 Score=56.49 Aligned_cols=166 Identities=11% Similarity=0.017 Sum_probs=98.3
Q ss_pred eEEEEEEEeCChhHHHHHHHhhHHHHHhhccCceEEEEEeeeeceeecCC-------------------cceeecCChh-
Q 043871 44 VNLSVYYESLSDTGAEFITHDLGKVFEKDLTSIVNLRLIPWGKAQIVEPN-------------------ETIVCEHGED- 103 (255)
Q Consensus 44 V~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lVP~GnA~~~~~~-------------------~~f~CQHGp~- 103 (255)
++|++|+.-.||.|-.+ ...|..+.. .+.+-++|+++|||-....... .++.-...+.
T Consensus 3 ~~I~~~~D~~CP~cy~~-~~~l~~l~~-~~~~~v~v~~~p~~L~~~~~~~~~~~~~~~~~~~~~r~a~~~G~~f~~~~~~ 80 (208)
T 3kzq_A 3 IKLYYVHDPMCSWCWGY-KPTIEKLKQ-QLPGVIQFEYVVGGLAPDTNLPMPPEMQQKLEGIWKQIETQLGTKFNYDFWK 80 (208)
T ss_dssp EEEEEEECTTCHHHHHH-HHHHHHHHH-HSCTTSEEEEEECCSSCSCCCBCCHHHHHHHHHHHHHHHHHHCCCCCTTHHH
T ss_pred eEEEEEECCCCchhhhh-hHHHHHHHH-hCCCCceEEEEecccccCCCCCCCHHHHHHHHHHHHHHHHHHCCcccHHHHh
Confidence 68999999999999855 344555544 5667899999998743110000 0011111100
Q ss_pred h--hhcchhhhhhhhcc-ccccchhhhhhhccc----cCCCCCCchhhHHHHhHhhcCCChhhhhhhhcCchhHHHHHHH
Q 043871 104 E--CYFNVIHACAIKAW-PEQLLHFTFIKCLEE----TSWGPTLDKEKVWRTCCQNLKLSPNLIKDCYDNGTGRWLELIY 176 (255)
Q Consensus 104 E--C~gN~iqaCai~~~-~~~~~~l~fI~Cm~~----~~~~~~~~~~~~~~~Ca~~~gl~~~~I~~C~~s~~G~~Ll~~~ 176 (255)
+ =..|...++-+-.. .......+|..=+.. .+.++ .........+++.|+|.+.+.+|.++.+.+..+.+.
T Consensus 81 ~~~~~~~s~~a~r~~~aa~~~g~~~~~~~~l~~a~~~~~~~~--~~~~~l~~~a~~~Gld~~~~~~~~~s~~~~~~v~~~ 158 (208)
T 3kzq_A 81 LCTPVRSTYQSCRAVIAAGFQDSYEQMLEAIQHAYYLRAMPP--HEEATHLQLAKEIGLNVQQFKNDMDGTLLEGVFQDQ 158 (208)
T ss_dssp HSCCBCCCHHHHHHHHHHHTTTCHHHHHHHHHHHHHTSCCCT--TCHHHHHHHHHHTTCCHHHHHHHHTSHHHHHHHHHH
T ss_pred cCCCcCCcHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcCCCC--CCHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHH
Confidence 0 01233333221111 111223455444432 12222 234567788999999999999999999988888888
Q ss_pred HHHhhhcCCCCceeeEEEEC--CeecC-----cchhcHHHHHHHhc
Q 043871 177 AAETERLKPPIQFVPWLTLN--GDAVG-----PDYGNFVKYVCEAY 215 (255)
Q Consensus 177 ~~~T~~l~P~~~~VPwI~iN--G~~~~-----~~~~nL~~~IC~~y 215 (255)
.+....+ ++.-+||++|| |+... .....|.+.|=...
T Consensus 159 ~~~a~~~--gv~g~Pt~~v~~~~~~~~~~~g~~~~e~~~~~i~~~~ 202 (208)
T 3kzq_A 159 LSLAKSL--GVNSYPSLVLQINDAYFPIEVDYLSTEPTLKLIRERI 202 (208)
T ss_dssp HHHHHHT--TCCSSSEEEEEETTEEEEECCCSSCSHHHHHHHHHHH
T ss_pred HHHHHHc--CCCcccEEEEEECCEEEEeeCCCCCHHHHHHHHHHHH
Confidence 8887776 68999999995 44321 22455666555443
No 20
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=97.18 E-value=0.0037 Score=54.28 Aligned_cols=168 Identities=8% Similarity=0.025 Sum_probs=104.3
Q ss_pred ceEEEEEEEeCChhHHHHHHHhhHHHHHhhcc--CceEEEEEeeeeceeecCCc--------------------------
Q 043871 43 KVNLSVYYESLSDTGAEFITHDLGKVFEKDLT--SIVNLRLIPWGKAQIVEPNE-------------------------- 94 (255)
Q Consensus 43 kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~--d~vdl~lVP~GnA~~~~~~~-------------------------- 94 (255)
|++|++|+.-.||.|--. ...|..+.. .+. .-++|++.||.-.-.....+
T Consensus 2 ~~~I~~~~D~~cPwcyig-~~~l~~a~~-~~~~~~~v~v~~~P~~L~p~~~~~g~~~~~~~~~~k~g~~~~~~~~~~~~~ 79 (239)
T 3gl5_A 2 HMRVEIWSDIACPWCYVG-KARFEKALA-AFPHRDGVEVVHRSFELDPGRAKDDVQPVLTMLTAKYGMSQEQAQAGEDNL 79 (239)
T ss_dssp CEEEEEEECSSCHHHHHH-HHHHHHHHH-TCTTGGGEEEEEEECCSCTTCCTTCCEEHHHHHHHHSCCCHHHHHHHHHHH
T ss_pred CeEEEEEEeCcCHhHHHH-HHHHHHHHH-hcCccCceEEEEEEeccccCCCCCCCCCHHHHHHHhhCCCHHHHHHHHHHH
Confidence 689999999999999555 344666655 354 46999999995220100000
Q ss_pred -------ceeecCChhhhhcchhhhhhhhcc-ccccchhhhhhhcccc----CCCCCCch-hhHHHHhHhhcCCChhhhh
Q 043871 95 -------TIVCEHGEDECYFNVIHACAIKAW-PEQLLHFTFIKCLEET----SWGPTLDK-EKVWRTCCQNLKLSPNLIK 161 (255)
Q Consensus 95 -------~f~CQHGp~EC~gN~iqaCai~~~-~~~~~~l~fI~Cm~~~----~~~~~~~~-~~~~~~Ca~~~gl~~~~I~ 161 (255)
++.=...+ .=..|...++-+-+. ........|+.=+... ..++ +. .......+.+.|+|.+.+.
T Consensus 80 ~r~a~~~Gl~f~~~~-~~~~nt~~a~r~~~~A~~~g~~~~~~~alf~a~~~~g~~i--~d~~~~L~~~a~~~Gld~~~~~ 156 (239)
T 3gl5_A 80 GAQAAAEGLAYRTRD-RDHGSTFDLHRLLHLAKERGRHEALLDAFYRGNFADERSV--FNDDERLVELAVGAGLDAEEVR 156 (239)
T ss_dssp HHHHHHTTCCCCCSS-CEECCCHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCSSCC--SSCHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHcCCCccCCC-CCCCChHHHHHHHHHHHhhCcHHHHHHHHHHHHHhcCCCC--CCHHHHHHHHHHHcCCCHHHHH
Confidence 01111100 012344444433222 1222344444444321 2222 23 4667888999999999999
Q ss_pred hhhcC-chhHHHHHHHHHHhhhcCCCCceeeEEEECCee-c-C-cchhcHHHHHHHhccC
Q 043871 162 DCYDN-GTGRWLELIYAAETERLKPPIQFVPWLTLNGDA-V-G-PDYGNFVKYVCEAYSG 217 (255)
Q Consensus 162 ~C~~s-~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iNG~~-~-~-~~~~nL~~~IC~~y~g 217 (255)
+|.++ .+.+..+.+..+....+ ++.-|||++|||++ + + .....|.+.|=.....
T Consensus 157 ~~l~s~~~~~~~v~~~~~~a~~~--Gv~GvPtfvv~g~~~v~Ga~~~e~~~~~i~~~~~~ 214 (239)
T 3gl5_A 157 AVLADPAAYADEVRADEREAAQL--GATGVPFFVLDRAYGVSGAQPAEVFTQALTQAWGE 214 (239)
T ss_dssp HHHHCTTTTHHHHHHHHHHHHHT--TCCSSSEEEETTTEEEESSCCHHHHHHHHHHHHHT
T ss_pred HHHcCcHhHHHHHHHHHHHHHHC--CCCeeCeEEECCcEeecCCCCHHHHHHHHHHHHhh
Confidence 99999 88888888887777766 68999999999985 3 2 2456777777766654
No 21
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=96.99 E-value=0.0025 Score=53.54 Aligned_cols=161 Identities=9% Similarity=0.047 Sum_probs=96.6
Q ss_pred CceEEEEEEEeCChhHHHHHHHhhHHHHHhhccCceEEEEEee--eeceeecCCc-----------------------ce
Q 043871 42 EKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTSIVNLRLIPW--GKAQIVEPNE-----------------------TI 96 (255)
Q Consensus 42 ~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lVP~--GnA~~~~~~~-----------------------~f 96 (255)
..++|++|+.-.||.|--. ...|..+.. .. -++|++.|| |-.-...++. ++
T Consensus 3 ~~~~I~~~~D~~cPwcyi~-~~~l~~~~~-~~--~~~v~~~p~~L~~~~~~~g~~~~~~~~~k~~~~~~~~~r~a~~~G~ 78 (202)
T 3fz5_A 3 AMNPIEFWFDFSSGYAFFA-AQRIEALAA-EL--GRTVLWRPYMLGAAFSVTGARGLSSTPLKRDYAQRDWARIARQRGL 78 (202)
T ss_dssp CCSCEEEEECTTCHHHHHH-HTTHHHHHH-HH--TCCEEEEECTTC----------CCSHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCceeEEEEeCCCHHHHHH-HHHHHHHHH-Hh--CCeEEEEeeeccchhhhcCCCCcccCcHHHHHHHHHHHHHHHHhCC
Confidence 3568999999999999554 334555544 22 388999998 3221100000 11
Q ss_pred eecCChhhhhcchhhhhhhhcc-ccc--cchhhhhhhcccc----CCCCCCchhhHHHHhHhhcCCChhhhhhhhcCchh
Q 043871 97 VCEHGEDECYFNVIHACAIKAW-PEQ--LLHFTFIKCLEET----SWGPTLDKEKVWRTCCQNLKLSPNLIKDCYDNGTG 169 (255)
Q Consensus 97 ~CQHGp~EC~gN~iqaCai~~~-~~~--~~~l~fI~Cm~~~----~~~~~~~~~~~~~~Ca~~~gl~~~~I~~C~~s~~G 169 (255)
.-.. +..=..|...++-+-+. ... ....+|+.=+... +.++ +........+.+.|+|.+.+.++.++.+.
T Consensus 79 ~f~~-~~~~~~~t~~a~r~~~~a~~~g~~~~~~~~~alf~a~~~~g~~i--~~~~~L~~~a~~~Gld~~~~~~~~~s~~~ 155 (202)
T 3fz5_A 79 TFRP-PADHPHVALAATRAFYWIEAQSPDAATAFAQRVFDLYFSDRLDT--ASPEAVSRLGPEVGLEPEALLAGIADPAL 155 (202)
T ss_dssp CCCC-CTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTTCCCT--TCHHHHHTTHHHHTCCHHHHHHHTTCHHH
T ss_pred CCCC-CCCCCCChHHHHHHHHHHHhhCchHHHHHHHHHHHHHHhcCCCC--CCHHHHHHHHHHcCCCHHHHHHHhcCHHH
Confidence 1111 11111355555533222 111 2455555555432 1122 23556788999999999999999999999
Q ss_pred HHHHHHHHHHhhhcCCCCceeeEEEECCeecC-c-chhcHHHHH
Q 043871 170 RWLELIYAAETERLKPPIQFVPWLTLNGDAVG-P-DYGNFVKYV 211 (255)
Q Consensus 170 ~~Ll~~~~~~T~~l~P~~~~VPwI~iNG~~~~-~-~~~nL~~~I 211 (255)
++.+.+..++...+ ++.-|||++|||+... . .+..|...+
T Consensus 156 ~~~v~~~~~~a~~~--Gv~GvPtfvv~g~~~~G~~~~~~l~~~l 197 (202)
T 3fz5_A 156 KETVRKIGEDAVAR--GIFGSPFFLVDDEPFWGWDRMEMMAEWI 197 (202)
T ss_dssp HHHHHHHHHHHHHT--TCCSSSEEEETTEEEESGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHC--CCCcCCEEEECCEEEecCCCHHHHHHHH
Confidence 99888888888776 6899999999998652 2 244454444
No 22
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=96.91 E-value=0.0039 Score=51.79 Aligned_cols=149 Identities=11% Similarity=0.019 Sum_probs=83.9
Q ss_pred CCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccCceEEEEEeeeeceeecCCcceeecCChhhhhcchhhhhhhhcccc
Q 043871 41 DEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTSIVNLRLIPWGKAQIVEPNETIVCEHGEDECYFNVIHACAIKAWPE 120 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lVP~GnA~~~~~~~~f~CQHGp~EC~gN~iqaCai~~~~~ 120 (255)
..++.|..|+.-.||.|++|- ...+-+.+++ + +.|..+|... |+..+ ..-+.-.++-...+.
T Consensus 21 ~~~~~vvef~d~~Cp~C~~~~--~~~~~~~~~~-~-v~~~~~p~~~-------------~~~~~-~aa~a~~Aa~~q~g~ 82 (185)
T 3feu_A 21 DGMAPVTEVFALSCGHCRNME--NFLPVISQEA-G-TDIGKMHITF-------------NQSAH-IASMFYYAAEMQVDG 82 (185)
T ss_dssp SCCCSEEEEECTTCHHHHHHG--GGHHHHHHHH-T-SCCEEEECCS-------------SSHHH-HHHHHHHHHHTTSSS
T ss_pred CCCCEEEEEECCCChhHHHhh--HHHHHHHHHh-C-CeEEEEeccC-------------Cccch-HHHHHHHHHHHHhCC
Confidence 367889999999999999993 3444443344 3 5666666421 11111 011111122111111
Q ss_pred ccchhhhhhhccccCCCCCC----chhhHHHHhHhhcCC-ChhhhhhhhcCchhHHHHHHHHHHhhhcCCCCceeeEEEE
Q 043871 121 QLLHFTFIKCLEETSWGPTL----DKEKVWRTCCQNLKL-SPNLIKDCYDNGTGRWLELIYAAETERLKPPIQFVPWLTL 195 (255)
Q Consensus 121 ~~~~l~fI~Cm~~~~~~~~~----~~~~~~~~Ca~~~gl-~~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~i 195 (255)
....++..=+......-.+ .........+.+.|+ |.+.+.++.++ .....+.+..+....+ +++-+|+++|
T Consensus 83 -~~~~~~~~~lf~a~~~~~~~~~~~~~~~L~~~a~~~Gl~d~~~~~~~~~~-~~~~~v~~~~~~a~~~--gv~GtPtfvv 158 (185)
T 3feu_A 83 -APDHAFMEDLFAATQMGEGTTLTEQQEAYSKAFTSRGLVSPYDFNEEQRD-TLIKKVDNAKMLSEKS--GISSVPTFVV 158 (185)
T ss_dssp -SCCHHHHHHHHHHHTCCTTSCHHHHHHHHHHHHHTTTCCCGGGCCHHHHH-HHHHHHHHHHHHHHHH--TCCSSSEEEE
T ss_pred -chHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHc--CCCccCEEEE
Confidence 0112333333211100000 234567788999998 99999999876 5556666666666666 6899999999
Q ss_pred CCeecC-----cchhcHHHHH
Q 043871 196 NGDAVG-----PDYGNFVKYV 211 (255)
Q Consensus 196 NG~~~~-----~~~~nL~~~I 211 (255)
||++.- .....|.+.|
T Consensus 159 ng~~~v~~~Ga~~~e~~~~~i 179 (185)
T 3feu_A 159 NGKYNVLIGGHDDPKQIADTI 179 (185)
T ss_dssp TTTEEECGGGCSSHHHHHHHH
T ss_pred CCEEEEecCCCCCHHHHHHHH
Confidence 999732 1245565554
No 23
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=96.33 E-value=0.019 Score=48.79 Aligned_cols=78 Identities=6% Similarity=-0.043 Sum_probs=57.1
Q ss_pred hhhHHHHhHhhcCCCh---hhhhhhhcCchhHHHHHHHHHHhhhcCCCCceeeEEEEC----CeecC--cchhcHHHHHH
Q 043871 142 KEKVWRTCCQNLKLSP---NLIKDCYDNGTGRWLELIYAAETERLKPPIQFVPWLTLN----GDAVG--PDYGNFVKYVC 212 (255)
Q Consensus 142 ~~~~~~~Ca~~~gl~~---~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iN----G~~~~--~~~~nL~~~IC 212 (255)
........+.+.|++. +.+.+|.++.+.+..+.+..+....+ ++.-|||++|| |+... +....|...+=
T Consensus 134 ~~~~L~~~a~~~Gl~~~d~~~~~~~~~s~~~~~~v~~~~~~a~~~--gv~G~Ptfvv~~~g~~~~~~G~~~~~~l~~~l~ 211 (226)
T 1r4w_A 134 ESQNILSAAEKAGMATAQAQHLLNKISTELVKSKLRETTGAACKY--GAFGLPTTVAHVDGKTYMLFGSDRMELLAYLLG 211 (226)
T ss_dssp SHHHHHHHHHHTTCCHHHHHHHHTTTTSHHHHHHHHHHHHHHHHT--TCCSSCEEEEEETTEEEEEESTTCHHHHHHHHT
T ss_pred CHHHHHHHHHHcCCCchhHHHHHHHcCCHHHHHHHHHHHHHHHHC--CCCCCCEEEEeCCCCcCceeCCCcHHHHHHHhc
Confidence 3456778899999964 47888888988888888887777766 68999999999 66542 23556677776
Q ss_pred HhccCCCCCC
Q 043871 213 EAYSGSHVPE 222 (255)
Q Consensus 213 ~~y~g~~~P~ 222 (255)
..+.| +.|.
T Consensus 212 ~~~~~-~~~~ 220 (226)
T 1r4w_A 212 EKWMG-PVPP 220 (226)
T ss_dssp CCCCC-SSCC
T ss_pred CcccC-CCCc
Confidence 66666 3443
No 24
>3rpp_A Glutathione S-transferase kappa 1; glutathione transferase, kappa GST, TRX domain, GSH binding, detoxification, APO form; 1.80A {Homo sapiens} PDB: 3rpn_A 1yzx_A*
Probab=96.14 E-value=0.075 Score=45.73 Aligned_cols=168 Identities=11% Similarity=-0.021 Sum_probs=95.2
Q ss_pred CceEEEEEEEeCChhHHHHHHHhhHHHHHhhccCceEEEEEee--eeceeec---CCc--------------------ce
Q 043871 42 EKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTSIVNLRLIPW--GKAQIVE---PNE--------------------TI 96 (255)
Q Consensus 42 ~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lVP~--GnA~~~~---~~~--------------------~f 96 (255)
.+.+|++|+.-.||.|--.. ..|..+.. .. -++|++.|| |..-... +.. ++
T Consensus 4 ~~~~I~~~~D~~CPwcyi~~-~~L~~~~~-~~--~v~v~~~p~~L~~~~~~~g~~~~~~~~~k~~y~~~~~~r~a~~~G~ 79 (234)
T 3rpp_A 4 LPRTVELFYDVLSPYSWLGF-EILCRYQN-IW--NINLQLRPSLITGIMKDSGNKPPGLLPRKGLYMANDLKLLRHHLQI 79 (234)
T ss_dssp CCEEEEEEECTTCHHHHHHH-HHHHHHTT-TS--SEEEEEEECCHHHHCC----CCCSSSCHHHHHHHHHHHHHHHHHTC
T ss_pred CCceEEEEEeCCCHHHHHHH-HHHHHHHH-Hc--CCeEEEEEeecchhhhhcCCCCcccChHHHHHHHHHHHHHHHHhCC
Confidence 45799999999999995442 23433322 12 488999998 3110000 000 11
Q ss_pred eecCCh--h--hhhcchhhhhhhhcc-c--cccchhhhhhhccc----cCCCCCCchhhHHHHhHhhcCCCh---hhhhh
Q 043871 97 VCEHGE--D--ECYFNVIHACAIKAW-P--EQLLHFTFIKCLEE----TSWGPTLDKEKVWRTCCQNLKLSP---NLIKD 162 (255)
Q Consensus 97 ~CQHGp--~--EC~gN~iqaCai~~~-~--~~~~~l~fI~Cm~~----~~~~~~~~~~~~~~~Ca~~~gl~~---~~I~~ 162 (255)
.-...+ . .-..|...++-+-.. . .......++.=+.. .+.++ +........+.+.|+|. +.+.+
T Consensus 80 ~f~~~~~~~~~~~~~nt~~a~r~~~aa~~~~~~~~~~~~~al~~A~~~~g~di--~d~~~L~~~a~~~GLd~~~~~~~l~ 157 (234)
T 3rpp_A 80 PIHFPKDFLSVMLEKGSLSAMRFLTAVNLEHPEMLEKASRELWMRVWSRNEDI--TEPQSILAAAEKAGMSAEQAQGLLE 157 (234)
T ss_dssp CCCCCSSCHHHHHHHCSHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHTSCCCC--SSHHHHHHHHHHTTCCHHHHHHHHT
T ss_pred CCCCCCCCcccccCCCCHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHcCCCCC--CCHHHHHHHHHHcCCCHHHHHHHHH
Confidence 111110 0 001154444433221 1 12334445444431 12222 34567788999999999 45556
Q ss_pred hhcCchhHHHHHHHHHHhhhcCCCCceeeEEEEC--Ce-e--cCc-chhcHHHHHHHhccC
Q 043871 163 CYDNGTGRWLELIYAAETERLKPPIQFVPWLTLN--GD-A--VGP-DYGNFVKYVCEAYSG 217 (255)
Q Consensus 163 C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iN--G~-~--~~~-~~~nL~~~IC~~y~g 217 (255)
-.++.+.++.+.++.++..++ ++.-|||++|| |+ . -+. .+..|...+=..+.|
T Consensus 158 ~~~s~~~~~~l~~~~~~a~~~--Gv~GvPtfvv~~~g~~~~f~G~drl~~l~~~L~~~~~~ 216 (234)
T 3rpp_A 158 KIATPKVKNQLKETTEAACRY--GAFGLPITVAHVDGQTHMLFGSDRMELLAHLLGEKWMG 216 (234)
T ss_dssp TTTSHHHHHHHHHHHHHHHHT--TCSSSCEEEEEETTEEEEEESSSCHHHHHHHHTCCCCC
T ss_pred HccCHHHHHHHHHHHHHHHHc--CCCCCCEEEEeCCCCcCceeCccCHHHHHHHhccccCC
Confidence 668888888888888887776 78999999995 74 2 233 345566666555666
No 25
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=94.58 E-value=0.047 Score=45.97 Aligned_cols=57 Identities=12% Similarity=0.069 Sum_probs=48.5
Q ss_pred hhhHHHHhHhhcCCChhhhhhhhcCchhHHHHHHHHHHhhhcCCCCceeeEEEECCeec
Q 043871 142 KEKVWRTCCQNLKLSPNLIKDCYDNGTGRWLELIYAAETERLKPPIQFVPWLTLNGDAV 200 (255)
Q Consensus 142 ~~~~~~~Ca~~~gl~~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iNG~~~ 200 (255)
........+...|+|.+.+.+|.++......+.+..+..+.+ +++-||+++|||++.
T Consensus 5 d~~~L~~~a~~~Gld~~~~~~~l~s~~~~~~v~~~~~~a~~~--gi~gvP~fvingk~~ 61 (197)
T 1un2_A 5 SASDIRDVFINAGIKGEEYDAAWNSFVVKSLVAQQEKAAADV--QLRGVPAMFVNGKYQ 61 (197)
T ss_dssp SHHHHHHHHHHHTCCHHHHHHHHTSHHHHHHHHHHHHHHHHT--TCCSSSEEEETTTEE
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHhCHHHHHHHHHHHHHHHHc--CCCcCCEEEEcceEe
Confidence 345667889999999999999999999888888887777766 678899999999974
No 26
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=88.28 E-value=0.76 Score=39.34 Aligned_cols=42 Identities=19% Similarity=0.257 Sum_probs=32.8
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccCceEEEEEeee
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTSIVNLRLIPWG 85 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lVP~G 85 (255)
...++.|.+|+.-.||+|++|.. +|.+.++. +.|.|.++||+
T Consensus 95 ~~ak~~v~~F~D~~Cp~C~~~~~-~l~~~~~~---g~v~v~~~~~p 136 (241)
T 1v58_A 95 KDAPVIVYVFADPFCPYCKQFWQ-QARPWVDS---GKVQLRTLLVG 136 (241)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHH-HHHHHHHT---TSEEEEEEECC
T ss_pred CCCCeEEEEEECCCChhHHHHHH-HHHHHHhC---CcEEEEEEECC
Confidence 45789999999999999999964 56776552 35788888874
No 27
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=84.06 E-value=1.1 Score=40.03 Aligned_cols=41 Identities=10% Similarity=0.163 Sum_probs=32.5
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccCceEEEEEeeee
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTSIVNLRLIPWGK 86 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lVP~Gn 86 (255)
.+.+..|.+|..-.||+|+++. .+|.+.+++ +++++++|+-
T Consensus 145 ~~gk~~I~vFtDp~CPYCkkl~-~~l~~~l~~-----~~Vr~i~~Pi 185 (273)
T 3tdg_A 145 ANKDKILYIVSDPMCPHCQKEL-TKLRDHLKE-----NTVRMVVVGW 185 (273)
T ss_dssp GGTTCEEEEEECTTCHHHHHHH-HTHHHHHHH-----CEEEEEECCC
T ss_pred CCCCeEEEEEECcCChhHHHHH-HHHHHHhhC-----CcEEEEEeec
Confidence 3577899999999999999995 457776642 7888888753
No 28
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=82.57 E-value=1.8 Score=34.55 Aligned_cols=40 Identities=15% Similarity=0.166 Sum_probs=28.4
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccCceEEEEEeeee
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTSIVNLRLIPWGK 86 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lVP~Gn 86 (255)
.+.++.|.+|..-.||+|++|-. .+. ++.+ +.|.++.|.-
T Consensus 12 ~~a~~~vv~f~D~~Cp~C~~~~~-----~l~-~l~~-v~v~~~~~P~ 51 (147)
T 3gv1_A 12 GNGKLKVAVFSDPDCPFCKRLEH-----EFE-KMTD-VTVYSFMMPI 51 (147)
T ss_dssp TTCCEEEEEEECTTCHHHHHHHH-----HHT-TCCS-EEEEEEECCC
T ss_pred CCCCEEEEEEECCCChhHHHHHH-----HHh-hcCc-eEEEEEEccc
Confidence 45789999999999999999843 344 4543 6666555543
No 29
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=73.94 E-value=4.7 Score=33.52 Aligned_cols=41 Identities=15% Similarity=0.297 Sum_probs=29.6
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccCceEEEEEeee
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTSIVNLRLIPWG 85 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lVP~G 85 (255)
...++.|.+|+...||+|++|. ..|.++ .+ . + +.|.++.|.
T Consensus 84 ~~~k~~vv~F~d~~Cp~C~~~~-~~l~~~-~~-~-~-v~v~~~~~p 124 (211)
T 1t3b_A 84 KNEKHVVTVFMDITCHYCHLLH-QQLKEY-ND-L-G-ITVRYLAFP 124 (211)
T ss_dssp TTCSEEEEEEECTTCHHHHHHH-TTHHHH-HH-T-T-EEEEEEECC
T ss_pred CCCCEEEEEEECCCCHhHHHHH-HHHHHH-Hh-C-C-cEEEEEECC
Confidence 3678999999999999999995 345553 22 1 3 777766664
No 30
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=71.29 E-value=4 Score=33.97 Aligned_cols=40 Identities=10% Similarity=0.176 Sum_probs=28.5
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccCceEEEEEee
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTSIVNLRLIPW 84 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lVP~ 84 (255)
...++.|.+|+-.-||+|+++.. .|..+.+ .-+.+.++.|
T Consensus 84 ~~~k~~vv~F~d~~Cp~C~~~~~-~l~~l~~----~~v~v~~~~~ 123 (216)
T 1eej_A 84 PQEKHVITVFTDITCGYCHKLHE-QMADYNA----LGITVRYLAF 123 (216)
T ss_dssp TTCCEEEEEEECTTCHHHHHHHT-THHHHHH----TTEEEEEEEC
T ss_pred CCCCEEEEEEECCCCHHHHHHHH-HHHHHHh----CCcEEEEEEC
Confidence 35789999999999999999953 3544432 1366666655
No 31
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=69.29 E-value=9.7 Score=25.99 Aligned_cols=16 Identities=6% Similarity=0.177 Sum_probs=14.5
Q ss_pred EEEEEEEeCChhHHHH
Q 043871 45 NLSVYYESLSDTGAEF 60 (255)
Q Consensus 45 ~V~vYyESlCPd~~~F 60 (255)
+|.+|+-+-||.|++.
T Consensus 3 ~~~~f~~~~C~~C~~~ 18 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSA 18 (80)
T ss_dssp EEEEEEECSCHHHHHH
T ss_pred ceEEEeCCCCCchHHH
Confidence 5899999999999877
No 32
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=68.75 E-value=5 Score=27.04 Aligned_cols=35 Identities=11% Similarity=0.233 Sum_probs=23.3
Q ss_pred ceEEEEEEEeCChhHHHHHHHhhHHHHHhhccCceEE
Q 043871 43 KVNLSVYYESLSDTGAEFITHDLGKVFEKDLTSIVNL 79 (255)
Q Consensus 43 kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl 79 (255)
+|.|-+||-+-||.|+.+.. .|..+.+ ++.+.+.+
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~-~l~~~~~-~~~~~~~~ 37 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKR-VVEEVAN-EMPDAVEV 37 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHH-HHHHHHH-HCSSSEEE
T ss_pred ceEEEEEeCCCCCchHHHHH-HHHHHHH-HcCCceEE
Confidence 57899999999999998842 3444333 34443333
No 33
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=59.31 E-value=3.9 Score=36.41 Aligned_cols=21 Identities=5% Similarity=-0.045 Sum_probs=18.5
Q ss_pred CCCceEEEEEEEeCChhHHHH
Q 043871 40 QDEKVNLSVYYESLSDTGAEF 60 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~F 60 (255)
..+++.|+||.-.-||+|.+.
T Consensus 40 ~~~~~~VelyTs~gCp~C~~A 60 (270)
T 2axo_A 40 EAVKGVVELFTSQGCASCPPA 60 (270)
T ss_dssp SCCCCEEEEEECTTCTTCHHH
T ss_pred cCCCcEEEEEeCCCCCChHHH
Confidence 456699999999999999977
No 34
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=53.17 E-value=29 Score=23.94 Aligned_cols=35 Identities=11% Similarity=0.152 Sum_probs=23.8
Q ss_pred CCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccCce
Q 043871 41 DEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTSIV 77 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d~v 77 (255)
..+.-|-.||-+-||.|+.+.. .|..+.+ .+.+.+
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~-~~~~~~~-~~~~~~ 52 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAP-VLEELAA-DYEGKA 52 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHH-HHHHHHH-HTTTTC
T ss_pred cCCcEEEEEECCCCHHHHHHhH-HHHHHHH-HhcCCc
Confidence 5667788888999999999842 3444443 455443
No 35
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=51.42 E-value=34 Score=23.73 Aligned_cols=34 Identities=6% Similarity=0.132 Sum_probs=23.2
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccC
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTS 75 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (255)
...++-|-.||-+-||.|+.+.. .|..+.+ .+.+
T Consensus 18 ~~~~~~~v~f~~~~C~~C~~~~~-~l~~~~~-~~~~ 51 (108)
T 2trx_A 18 KADGAILVDFWAEWCGPCKMIAP-ILDEIAD-EYQG 51 (108)
T ss_dssp TCSSEEEEEEECTTCHHHHHHHH-HHHHHHH-HTTT
T ss_pred hcCCeEEEEEECCCCHhHHHHHH-HHHHHHH-HhCC
Confidence 45677888899999999999843 3444433 3444
No 36
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=50.87 E-value=28 Score=24.40 Aligned_cols=34 Identities=9% Similarity=0.080 Sum_probs=23.3
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccC
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTS 75 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (255)
...++-|-.||-+-||.|+.+.. .|..+.. .+.+
T Consensus 23 ~~~~~~lv~f~~~~C~~C~~~~~-~l~~~~~-~~~~ 56 (115)
T 1thx_A 23 KAEQPVLVYFWASWCGPCQLMSP-LINLAAN-TYSD 56 (115)
T ss_dssp TCSSCEEEEEECTTCTTHHHHHH-HHHHHHH-HTTT
T ss_pred cCCceEEEEEECCCCHHHHHhHH-HHHHHHH-HhCC
Confidence 45677888899999999998853 3444433 3444
No 37
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=49.73 E-value=34 Score=23.55 Aligned_cols=34 Identities=9% Similarity=0.174 Sum_probs=22.9
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccC
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTS 75 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (255)
...+.-|-.||-+-||.|+.+.. .|..+.+ .+.+
T Consensus 18 ~~~~~~lv~f~~~~C~~C~~~~~-~~~~~~~-~~~~ 51 (107)
T 2i4a_A 18 KASGLVLVDFWAEWCGPCKMIGP-ALGEIGK-EFAG 51 (107)
T ss_dssp TCSSEEEEEEECTTCHHHHHHHH-HHHHHHH-HHTT
T ss_pred hCCCEEEEEEECCCChhHHHHhH-HHHHHHH-HhCC
Confidence 45677888888999999999843 3443333 3444
No 38
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=49.66 E-value=8.1 Score=28.07 Aligned_cols=19 Identities=11% Similarity=-0.055 Sum_probs=16.1
Q ss_pred CceEEEEEEEeCChhHHHH
Q 043871 42 EKVNLSVYYESLSDTGAEF 60 (255)
Q Consensus 42 ~kV~V~vYyESlCPd~~~F 60 (255)
.+-+|.||+-+.||+|++.
T Consensus 20 ~~~~v~ly~~~~Cp~C~~a 38 (103)
T 3nzn_A 20 DRGKVIMYGLSTCVWCKKT 38 (103)
T ss_dssp CCSCEEEEECSSCHHHHHH
T ss_pred CCCeEEEEcCCCCchHHHH
Confidence 3456889999999999887
No 39
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=49.47 E-value=35 Score=23.41 Aligned_cols=34 Identities=3% Similarity=0.098 Sum_probs=22.9
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccC
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTS 75 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (255)
..++.-|-.||-+-||.|+.+.. .|..+.+ .+.+
T Consensus 16 ~~~~~~~v~f~~~~C~~C~~~~~-~~~~~~~-~~~~ 49 (105)
T 1fb6_A 16 ESEVPVMVDFWAPWCGPCKLIAP-VIDELAK-EYSG 49 (105)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHH-HHHHHHH-HTTT
T ss_pred cCCCcEEEEEECCCChHHHHHHH-HHHHHHH-HhcC
Confidence 34567788889999999999853 3444433 3544
No 40
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=49.19 E-value=6.8 Score=26.86 Aligned_cols=17 Identities=6% Similarity=-0.013 Sum_probs=14.9
Q ss_pred eEEEEEEEeCChhHHHH
Q 043871 44 VNLSVYYESLSDTGAEF 60 (255)
Q Consensus 44 V~V~vYyESlCPd~~~F 60 (255)
..|.||.-+.||+|++.
T Consensus 4 m~v~ly~~~~Cp~C~~~ 20 (89)
T 3msz_A 4 MKVKIYTRNGCPYCVWA 20 (89)
T ss_dssp CCEEEEECTTCHHHHHH
T ss_pred eEEEEEEcCCChhHHHH
Confidence 46899999999999875
No 41
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=48.87 E-value=35 Score=23.45 Aligned_cols=33 Identities=6% Similarity=0.106 Sum_probs=22.3
Q ss_pred CCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccC
Q 043871 41 DEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTS 75 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (255)
..+.-|-.||-+-||.|+.+.. .|..+.+ .+.+
T Consensus 17 ~~~~~lv~f~~~~C~~C~~~~~-~l~~~~~-~~~~ 49 (109)
T 2yzu_A 17 QHPLVLVDFWAEWCAPCRMIAP-ILEEIAK-EYEG 49 (109)
T ss_dssp HCSEEEEEEECTTCHHHHHHHH-HHHHHHH-HTBT
T ss_pred CCCeEEEEEECCCCHHHHHhhH-HHHHHHH-HhhC
Confidence 3567778888999999999853 3444433 3443
No 42
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=48.66 E-value=7.8 Score=28.40 Aligned_cols=20 Identities=10% Similarity=0.003 Sum_probs=16.8
Q ss_pred CCceEEEEEEEeCChhHHHH
Q 043871 41 DEKVNLSVYYESLSDTGAEF 60 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~F 60 (255)
..+.+|.||.-+-||+|++.
T Consensus 13 ~~~~~v~vy~~~~Cp~C~~a 32 (99)
T 3qmx_A 13 AVSAKIEIYTWSTCPFCMRA 32 (99)
T ss_dssp CCCCCEEEEECTTCHHHHHH
T ss_pred cCCCCEEEEEcCCChhHHHH
Confidence 34458899999999999887
No 43
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=48.64 E-value=34 Score=23.60 Aligned_cols=34 Identities=12% Similarity=0.086 Sum_probs=22.4
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccC
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTS 75 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (255)
..+++-|-.||-+-||.|+.+.. .|..+.+ .+.+
T Consensus 15 ~~~~~~~v~f~~~~C~~C~~~~~-~l~~~~~-~~~~ 48 (105)
T 1nsw_A 15 QGDGPVLVDFWAAWCGPCRMMAP-VLEEFAE-AHAD 48 (105)
T ss_dssp SSSSCEEEEEECTTCHHHHHHHH-HHHHHHH-HSTT
T ss_pred hCCCcEEEEEECCCCHHHHHHHH-HHHHHHH-HhcC
Confidence 34567788889999999998853 3433333 3444
No 44
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=48.52 E-value=34 Score=23.22 Aligned_cols=33 Identities=6% Similarity=0.147 Sum_probs=22.2
Q ss_pred CCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccC
Q 043871 41 DEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTS 75 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (255)
..++-|-.||-+-||.|+.+.. .|..+.+ .+.+
T Consensus 15 ~~~~~~v~f~~~~C~~C~~~~~-~~~~~~~-~~~~ 47 (104)
T 2e0q_A 15 SHEIAVVDFWAEWCAPCLILAP-IIEELAE-DYPQ 47 (104)
T ss_dssp HSSEEEEEEECTTCHHHHHHHH-HHHHHHH-HCTT
T ss_pred cCCcEEEEEECCCChhHHHHhH-HHHHHHH-HcCC
Confidence 4567788888999999999853 3444333 3544
No 45
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=47.21 E-value=7.7 Score=27.19 Aligned_cols=15 Identities=13% Similarity=0.038 Sum_probs=12.2
Q ss_pred EEEEEEe----CChhHHHH
Q 043871 46 LSVYYES----LSDTGAEF 60 (255)
Q Consensus 46 V~vYyES----lCPd~~~F 60 (255)
|.||.-+ .||+|++.
T Consensus 2 v~iY~~~~~~~~Cp~C~~a 20 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNA 20 (87)
T ss_dssp EEEEECCTTTSCCHHHHHH
T ss_pred EEEEEeCCCCCcCccHHHH
Confidence 6788888 88888776
No 46
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=46.31 E-value=17 Score=27.22 Aligned_cols=22 Identities=18% Similarity=0.187 Sum_probs=17.7
Q ss_pred EEEEEEEeCChhHHHHHHHhhHHHHH
Q 043871 45 NLSVYYESLSDTGAEFITHDLGKVFE 70 (255)
Q Consensus 45 ~V~vYyESlCPd~~~Fi~~qL~P~~~ 70 (255)
.|.+|+-+-||+|++. |.++++
T Consensus 26 ~Vvvf~~~~Cp~C~~a----lk~~L~ 47 (118)
T 3c1r_A 26 EIFVASKTYCPYCHAA----LNTLFE 47 (118)
T ss_dssp SEEEEECSSCHHHHHH----HHHHHT
T ss_pred cEEEEEcCCCcCHHHH----HHHHHH
Confidence 4788999999999987 456665
No 47
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=46.17 E-value=22 Score=25.69 Aligned_cols=32 Identities=9% Similarity=0.036 Sum_probs=21.5
Q ss_pred CCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccCceE
Q 043871 41 DEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTSIVN 78 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d~vd 78 (255)
..+..|.+|+-.-||.|+.. .|+++ ++..-++
T Consensus 14 ~~~~~v~~f~~~~C~~C~~~-----~~~L~-~l~~~i~ 45 (100)
T 1wjk_A 14 RALPVLTLFTKAPCPLCDEA-----KEVLQ-PYKDRFI 45 (100)
T ss_dssp CCCCEEEEEECSSCHHHHHH-----HHHTS-TTSSSSE
T ss_pred CCCCEEEEEeCCCCcchHHH-----HHHHH-HhhhCCe
Confidence 34567899999999999765 55554 3443333
No 48
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=45.53 E-value=43 Score=23.14 Aligned_cols=34 Identities=3% Similarity=0.047 Sum_probs=22.6
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccC
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTS 75 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (255)
..+++-|-.||-+-||.|+.+.. .|..+.. .+.+
T Consensus 17 ~~~~~~lv~f~~~~C~~C~~~~~-~l~~~~~-~~~~ 50 (107)
T 1dby_A 17 ESSVPVLVDFWAPWCGPCRIIAP-VVDEIAG-EYKD 50 (107)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHH-HHHHHHH-HTTT
T ss_pred cCCCcEEEEEECCCCHhHHHHHH-HHHHHHH-HhCC
Confidence 34567788888999999999853 3444433 3444
No 49
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=45.50 E-value=46 Score=22.79 Aligned_cols=29 Identities=7% Similarity=0.080 Sum_probs=21.0
Q ss_pred CCceEEEEEEEeCChhHHHHHHHhhHHHHH
Q 043871 41 DEKVNLSVYYESLSDTGAEFITHDLGKVFE 70 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~ 70 (255)
.+++-|-.||-+-||.|+.+.. .|..+.+
T Consensus 19 ~~~~~vv~f~~~~C~~C~~~~~-~l~~~~~ 47 (106)
T 1xwb_A 19 SGKLVVLDFFATWCGPCKMISP-KLVELST 47 (106)
T ss_dssp TTSEEEEEEECTTCHHHHHHHH-HHHHHHH
T ss_pred CCCEEEEEEECCcCHHHHHhhH-HHHHHHH
Confidence 5677888899999999999853 3444433
No 50
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=45.43 E-value=7.7 Score=26.04 Aligned_cols=18 Identities=22% Similarity=0.217 Sum_probs=15.9
Q ss_pred eEEEEEEEeCChhHHHHH
Q 043871 44 VNLSVYYESLSDTGAEFI 61 (255)
Q Consensus 44 V~V~vYyESlCPd~~~Fi 61 (255)
|.|-+||-+-||.|+.+.
T Consensus 3 ~~vv~f~~~~C~~C~~~~ 20 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAI 20 (85)
T ss_dssp CCEEEESCSSSCCSTTHH
T ss_pred EEEEEEECCCCcchHHHH
Confidence 678899999999999885
No 51
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=44.67 E-value=32 Score=25.07 Aligned_cols=38 Identities=13% Similarity=0.171 Sum_probs=25.8
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccCceEE
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTSIVNL 79 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl 79 (255)
...|+.|-.||-+-||.|+.++ ..|..+.+ ++.+.+.|
T Consensus 27 ~~gk~~lv~f~~~~C~~C~~~~-~~l~~l~~-~~~~~~~~ 64 (148)
T 2b5x_A 27 IGEKPTLIHFWSISCHLCKEAM-PQVNEFRD-KYQDQLNV 64 (148)
T ss_dssp TTTSCEEEEEECTTCHHHHHHH-HHHHHHHH-HHTTTSEE
T ss_pred cCCCEEEEEEEcCCCHHHHHHh-HHHHHHHH-HhcCCcEE
Confidence 3456778888889999999985 34555555 45554443
No 52
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=43.86 E-value=28 Score=26.09 Aligned_cols=35 Identities=6% Similarity=0.061 Sum_probs=24.3
Q ss_pred CCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccCceEEEE
Q 043871 41 DEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTSIVNLRL 81 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~l 81 (255)
..++-|-.||-+-||.|+.+ .|.++ ++.+..++.+
T Consensus 39 ~~k~vvv~F~a~wC~~C~~~-----~p~l~-~l~~~~~v~~ 73 (133)
T 3cxg_A 39 QNSSIVIKFGAVWCKPCNKI-----KEYFK-NQLNYYYVTL 73 (133)
T ss_dssp CCSEEEEEEECTTCHHHHHT-----HHHHH-GGGGTEECEE
T ss_pred CCCEEEEEEECCCCHHHHHH-----HHHHH-HHHHhcCEEE
Confidence 35788888999999999985 56666 3554334333
No 53
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=43.59 E-value=14 Score=28.43 Aligned_cols=16 Identities=6% Similarity=-0.112 Sum_probs=14.4
Q ss_pred EEEEEEEeCChhHHHH
Q 043871 45 NLSVYYESLSDTGAEF 60 (255)
Q Consensus 45 ~V~vYyESlCPd~~~F 60 (255)
+|.||+-+-||+|++.
T Consensus 38 ~Vvvy~~~~Cp~C~~a 53 (129)
T 3ctg_A 38 EVFVAAKTYCPYCKAT 53 (129)
T ss_dssp SEEEEECTTCHHHHHH
T ss_pred CEEEEECCCCCchHHH
Confidence 4889999999999977
No 54
>2wsh_A Endonuclease II; GIY-YIG, hydrolase; 1.90A {Enterobacteria phage T4}
Probab=43.32 E-value=10 Score=30.68 Aligned_cols=18 Identities=33% Similarity=0.818 Sum_probs=15.2
Q ss_pred HHHHHHHHHhhCccCCCC
Q 043871 237 EKETAILLKQMRPKWNIG 254 (255)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~ 254 (255)
--.|+-+.++.+|+|||-
T Consensus 122 llLE~nLIK~~~P~yNi~ 139 (143)
T 2wsh_A 122 DLEAPLFIKLFNPPWNIQ 139 (143)
T ss_dssp HHHHHHHHHHHCCTTCCC
T ss_pred HHHHHHHHHHhCCccHhh
Confidence 346889999999999983
No 55
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=43.06 E-value=36 Score=25.79 Aligned_cols=39 Identities=10% Similarity=0.141 Sum_probs=27.6
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccCceEEEEEe
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTSIVNLRLIP 83 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lVP 83 (255)
...|+.|-.|+-+-||.|+..+ ..|..+.+ ++. +++++-
T Consensus 35 ~~gk~~lv~F~~~~C~~C~~~~-~~l~~l~~-~~~---~v~vv~ 73 (165)
T 3ha9_A 35 VGGDVVILWFMAAWCPSCVYMA-DLLDRLTE-KYR---EISVIA 73 (165)
T ss_dssp CCSSEEEEEEECTTCTTHHHHH-HHHHHHHH-HCT---TEEEEE
T ss_pred hCCCEEEEEEECCCCcchhhhH-HHHHHHHH-HcC---CcEEEE
Confidence 3568888889999999999986 34666665 355 455543
No 56
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=42.87 E-value=46 Score=23.30 Aligned_cols=34 Identities=9% Similarity=0.210 Sum_probs=22.9
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccC
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTS 75 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (255)
...++-|-.||-+-||.|+.+.. .|..+.+ .+.+
T Consensus 21 ~~~~~~vv~f~~~~C~~C~~~~~-~l~~~~~-~~~~ 54 (112)
T 1t00_A 21 KNDKPVLVDFWAAWCGPCRQIAP-SLEAIAA-EYGD 54 (112)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHH-HHHHHHH-HTTT
T ss_pred hCCCeEEEEEECCCCHhHHhcCH-HHHHHHH-HhcC
Confidence 44667788889999999998853 3444433 3443
No 57
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=42.22 E-value=49 Score=22.95 Aligned_cols=22 Identities=9% Similarity=0.132 Sum_probs=17.8
Q ss_pred CCCceEEEEEEEeCChhHHHHH
Q 043871 40 QDEKVNLSVYYESLSDTGAEFI 61 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi 61 (255)
..++.-|-.||-+-||.|+.+.
T Consensus 20 ~~~~~vlv~f~a~~C~~C~~~~ 41 (111)
T 3gnj_A 20 DEGKACLVMFSRKNCHVCQKVT 41 (111)
T ss_dssp TSCCCEEEEEECSSCHHHHHHH
T ss_pred hcCCEEEEEEeCCCChhHHHHH
Confidence 3456778888899999999884
No 58
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=41.98 E-value=48 Score=23.86 Aligned_cols=34 Identities=9% Similarity=0.010 Sum_probs=23.3
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccC
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTS 75 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (255)
...++-|-.||-+-||.|+.+.. .|..+.+ ++.+
T Consensus 29 ~~~k~vlv~f~a~~C~~C~~~~~-~l~~~~~-~~~~ 62 (119)
T 1w4v_A 29 NSETPVVVDFHAQWCGPCKILGP-RLEKMVA-KQHG 62 (119)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHH-HHHHHHH-HTTT
T ss_pred cCCCcEEEEEECCCCHHHHHHHH-HHHHHHH-HhcC
Confidence 45667788888999999999853 3444443 3443
No 59
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=41.65 E-value=35 Score=25.30 Aligned_cols=40 Identities=5% Similarity=0.082 Sum_probs=27.7
Q ss_pred CCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccCceEEEEEe
Q 043871 41 DEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTSIVNLRLIP 83 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lVP 83 (255)
..|+-|-.|+-+-||.|+..+- .|..+++ ++.+. ++++|-
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~-~l~~l~~-~~~~~-~~~vv~ 70 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNV-QLANEVN-KFGPD-KIAMCS 70 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHH-HHHHHHT-TSCTT-TEEEEE
T ss_pred CCCEEEEEEEcCcCHHHHHHHH-HHHHHHH-HhCcC-CEEEEE
Confidence 5578888899999999998863 4666655 45543 455543
No 60
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=41.24 E-value=8.9 Score=28.09 Aligned_cols=16 Identities=19% Similarity=0.275 Sum_probs=12.3
Q ss_pred EEEEEEEeCChhHHHH
Q 043871 45 NLSVYYESLSDTGAEF 60 (255)
Q Consensus 45 ~V~vYyESlCPd~~~F 60 (255)
.|+||.-+.||+|.+.
T Consensus 5 ~I~vYs~~~Cp~C~~a 20 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRL 20 (92)
T ss_dssp CEEEEECTTCSSHHHH
T ss_pred cEEEEcCCCCHhHHHH
Confidence 4778888888888765
No 61
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=40.63 E-value=52 Score=22.56 Aligned_cols=34 Identities=15% Similarity=0.067 Sum_probs=23.0
Q ss_pred CCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccCc
Q 043871 41 DEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTSI 76 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d~ 76 (255)
..++-|-.||-+-||.|+.+. ..|..+.+ .+.+.
T Consensus 20 ~~~~~lv~f~~~~C~~C~~~~-~~~~~~~~-~~~~~ 53 (109)
T 3tco_A 20 NNKLVLVDCWAEWCAPCHLYE-PIYKKVAE-KYKGK 53 (109)
T ss_dssp HSSEEEEEEECTTCHHHHHHH-HHHHHHHH-HTTTT
T ss_pred cCCeEEEEEECCCCHHHHhhh-HHHHHHHH-HhCCC
Confidence 366778888999999999985 23444433 45543
No 62
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=40.16 E-value=55 Score=23.60 Aligned_cols=30 Identities=10% Similarity=0.119 Sum_probs=21.5
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHH
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFE 70 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~ 70 (255)
...++-|-.||-+-||.|+.+.. .|..+.+
T Consensus 24 ~~~k~~lv~f~a~wC~~C~~~~~-~l~~~~~ 53 (126)
T 2l57_A 24 KEGIPTIIMFKTDTCPYCVEMQK-ELSYVSK 53 (126)
T ss_dssp CSSSCEEEEEECSSCHHHHHHHH-HHHHHHH
T ss_pred hCCCcEEEEEECCCCccHHHHHH-HHHHHHH
Confidence 45667788889999999999853 3444443
No 63
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=40.09 E-value=48 Score=24.56 Aligned_cols=33 Identities=9% Similarity=0.165 Sum_probs=22.6
Q ss_pred CCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccC
Q 043871 41 DEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTS 75 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (255)
..++-|-.||-+-||.|+.+.. .|..+.. .+.+
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~~-~l~~l~~-~~~~ 69 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVAP-ILDELAK-EYDG 69 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHHH-HHHHHHH-HTTT
T ss_pred CCCEEEEEEECCcCHHHHHHHH-HHHHHHH-HhcC
Confidence 4567788899999999999853 3444433 3444
No 64
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=39.82 E-value=52 Score=24.33 Aligned_cols=34 Identities=6% Similarity=0.156 Sum_probs=23.4
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccC
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTS 75 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (255)
...++-|-.||-+-||.|+.+.. .|..+.+ .+.+
T Consensus 38 ~~~k~vlv~F~a~wC~~C~~~~p-~l~~l~~-~~~~ 71 (128)
T 2o8v_B 38 KADGAILVDFWAEWCGPAKMIAP-ILDEIAD-EYQG 71 (128)
T ss_dssp TCSSEEEEEEECSSCHHHHHTHH-HHHHHHH-HTTT
T ss_pred hcCCEEEEEEECCCCHHHHHHhH-HHHHHHH-HhcC
Confidence 45678888999999999998842 3444433 3444
No 65
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=38.73 E-value=14 Score=24.88 Aligned_cols=16 Identities=13% Similarity=0.162 Sum_probs=13.2
Q ss_pred EEEEEEEeCChhHHHH
Q 043871 45 NLSVYYESLSDTGAEF 60 (255)
Q Consensus 45 ~V~vYyESlCPd~~~F 60 (255)
+|.+|+-+.||+|++.
T Consensus 2 ~i~~y~~~~C~~C~~~ 17 (82)
T 1fov_A 2 NVEIYTKETCPYCHRA 17 (82)
T ss_dssp CEEEEECSSCHHHHHH
T ss_pred cEEEEECCCChhHHHH
Confidence 3678998999999875
No 66
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=38.69 E-value=57 Score=23.07 Aligned_cols=29 Identities=10% Similarity=0.100 Sum_probs=20.9
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHH
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVF 69 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~ 69 (255)
...+.-|-.||-+-||.|+.+.. .|..+.
T Consensus 28 ~~~~~~lv~f~~~~C~~C~~~~~-~~~~~~ 56 (121)
T 2i1u_A 28 SSNKPVLVDFWATWCGPCKMVAP-VLEEIA 56 (121)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHH-HHHHHH
T ss_pred hCCCcEEEEEECCCCHHHHHHHH-HHHHHH
Confidence 44667788899999999999853 344443
No 67
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=38.50 E-value=57 Score=22.31 Aligned_cols=33 Identities=6% Similarity=0.044 Sum_probs=22.7
Q ss_pred CCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccC
Q 043871 41 DEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTS 75 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (255)
.+++-|-.||-+-||.|+.+.. .|..+.+ .+.+
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~-~~~~~~~-~~~~ 51 (105)
T 3m9j_A 19 GDKLVVVDFSATWCGPCKMIKP-FFHSLSE-KYSN 51 (105)
T ss_dssp TTSCEEEEEECTTCHHHHHHHH-HHHHHHH-HSTT
T ss_pred CCCeEEEEEECCCChhhHHHHH-HHHHHHH-HccC
Confidence 4677888899999999999852 3444433 3444
No 68
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=38.38 E-value=97 Score=21.82 Aligned_cols=24 Identities=17% Similarity=0.185 Sum_probs=19.2
Q ss_pred CCCCceEEEEEEEeCChhHHHHHH
Q 043871 39 KQDEKVNLSVYYESLSDTGAEFIT 62 (255)
Q Consensus 39 ~~~~kV~V~vYyESlCPd~~~Fi~ 62 (255)
....++-|-.||-+-||.|+++.-
T Consensus 22 ~~~~~~vlv~f~a~wC~~C~~~~p 45 (121)
T 2djj_A 22 LDDTKDVLIEFYAPWCGHCKALAP 45 (121)
T ss_dssp SCTTSCEEEEEECSSCTTHHHHHH
T ss_pred hcCCCCEEEEEECCCCHhHHHhhH
Confidence 345677788899999999999853
No 69
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=38.20 E-value=53 Score=23.42 Aligned_cols=33 Identities=6% Similarity=0.060 Sum_probs=22.8
Q ss_pred CCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccC
Q 043871 41 DEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTS 75 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (255)
..++-|-.||-+-||.|+.+.. .|..+.+ ++.+
T Consensus 33 ~~~~~vv~f~~~~C~~C~~~~~-~l~~~~~-~~~~ 65 (122)
T 2vlu_A 33 AKKLVVIDFTASWCGPCRIMAP-VFADLAK-KFPN 65 (122)
T ss_dssp TTCCEEEEEECTTCHHHHHHHH-HHHHHHH-HCTT
T ss_pred cCCEEEEEEECCCCHHHHHHHH-HHHHHHH-HCCC
Confidence 4677788888999999999853 3444443 3444
No 70
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=38.02 E-value=39 Score=25.25 Aligned_cols=41 Identities=12% Similarity=-0.026 Sum_probs=26.9
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccCceEEEEE
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTSIVNLRLI 82 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lV 82 (255)
...|+-|-.||-+-||.|+..+...|..+++ ++.+. ++++|
T Consensus 26 ~~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~-~~~~~-~v~~v 66 (158)
T 3eyt_A 26 LRGKVIVIEAFQMLCPGCVMHGIPLAQKVRA-AFPED-KVAVL 66 (158)
T ss_dssp GTTSEEEEEEECTTCHHHHHTHHHHHHHHHH-HSCTT-TEEEE
T ss_pred hCCCEEEEEEECCcCcchhhhhhHHHHHHHH-HhCcC-CEEEE
Confidence 3457777778889999999963345666665 45532 34444
No 71
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=37.88 E-value=58 Score=22.63 Aligned_cols=28 Identities=7% Similarity=0.024 Sum_probs=20.3
Q ss_pred CCceEEEEEEEeCChhHHHHHHHhhHHHH
Q 043871 41 DEKVNLSVYYESLSDTGAEFITHDLGKVF 69 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~ 69 (255)
..++-|-.||-+-||.|+.+.. .|..+.
T Consensus 25 ~~~~~vv~f~~~~C~~C~~~~~-~l~~~~ 52 (113)
T 1ti3_A 25 SQKLIVVDFTASWCPPCKMIAP-IFAELA 52 (113)
T ss_dssp SSSEEEEEEECSSCHHHHHHHH-HHHHHH
T ss_pred cCCeEEEEEECCCCHHHHHHHH-HHHHHH
Confidence 4677788888999999998853 344443
No 72
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=37.45 E-value=54 Score=22.81 Aligned_cols=31 Identities=6% Similarity=-0.002 Sum_probs=21.2
Q ss_pred CceEEEEEEEeCChhHHHHHHHhhHHHHHhhcc
Q 043871 42 EKVNLSVYYESLSDTGAEFITHDLGKVFEKDLT 74 (255)
Q Consensus 42 ~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~ 74 (255)
.++-|-.||-+-||.|+.+.. .|..+.. .+.
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~-~l~~~~~-~~~ 54 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAP-LFETLSN-DYA 54 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHH-HHHHHHH-HTT
T ss_pred CCeEEEEEECCCCHHHHHHHH-HHHHHHH-HcC
Confidence 567788888999999999853 3444333 344
No 73
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=37.40 E-value=53 Score=24.15 Aligned_cols=35 Identities=9% Similarity=0.157 Sum_probs=23.6
Q ss_pred CCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccCce
Q 043871 41 DEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTSIV 77 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d~v 77 (255)
..++-|-.||-+-||.|+.+.- .|..+.. .+.+.+
T Consensus 50 ~~k~vlv~f~a~wC~~C~~~~~-~~~~~~~-~~~~~~ 84 (141)
T 3hxs_A 50 GDKPAIVDFYADWCGPCKMVAP-ILEELSK-EYAGKI 84 (141)
T ss_dssp CSSCEEEEEECTTCTTHHHHHH-HHHHHHH-HTTTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHH-HHHHHHH-HhcCce
Confidence 4677888888999999999852 3444433 455433
No 74
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=37.17 E-value=75 Score=22.87 Aligned_cols=32 Identities=3% Similarity=0.140 Sum_probs=23.8
Q ss_pred CCceEEEEEEEeCChhHHHHHHHhhHHHHHhhcc
Q 043871 41 DEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLT 74 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~ 74 (255)
..|+-|-.||-+-||.|+.++ ..|..+.+ ++.
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~-~~l~~~~~-~~~ 64 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKEL-PQFQSFYD-AHP 64 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHH-HHHHHHHH-HCC
T ss_pred CCCEEEEEEECCCCHHHHHHH-HHHHHHHH-HcC
Confidence 667778888899999999975 34666655 454
No 75
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=36.42 E-value=64 Score=24.00 Aligned_cols=35 Identities=11% Similarity=0.058 Sum_probs=24.9
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccC
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTS 75 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (255)
...|+-|-.||-+-||.|+..+...|..+++ ++.+
T Consensus 28 ~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~-~~~~ 62 (160)
T 3lor_A 28 LRGKVVVVEVFQMLCPGCVNHGVPQAQKIHR-MIDE 62 (160)
T ss_dssp HTTSEEEEEEECTTCHHHHHTHHHHHHHHHH-HSCT
T ss_pred hCCCEEEEEEEcCCCcchhhhhhHHHHHHHH-HhCc
Confidence 3467788888889999999853345666665 4654
No 76
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=35.86 E-value=63 Score=23.78 Aligned_cols=34 Identities=6% Similarity=0.057 Sum_probs=24.5
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccC
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTS 75 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (255)
...|+-|-.||-+-||.|+.++. .|..+.+ ++.+
T Consensus 26 ~~gk~vll~f~~~~C~~C~~~~~-~l~~l~~-~~~~ 59 (152)
T 3gl3_A 26 KTGSVVYLDFWASWCGPCRQSFP-WMNQMQA-KYKA 59 (152)
T ss_dssp GTTSEEEEEEECTTCTHHHHHHH-HHHHHHH-HHGG
T ss_pred hCCCEEEEEEECCcCHHHHHHHH-HHHHHHH-Hhhc
Confidence 35677888888999999998864 3666655 3544
No 77
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=35.55 E-value=91 Score=22.60 Aligned_cols=35 Identities=9% Similarity=0.115 Sum_probs=24.2
Q ss_pred CCCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccC
Q 043871 39 KQDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTS 75 (255)
Q Consensus 39 ~~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (255)
....++-|-.||-+-||.|+.+.. .|..+.+ ++.+
T Consensus 39 ~~~~k~vlv~F~a~wC~~C~~~~p-~l~~~~~-~~~~ 73 (128)
T 3ul3_B 39 NMKNTVIVLYFFAKWCQACTMQST-EMDKLQK-YYGK 73 (128)
T ss_dssp TSCCSEEEEEEECTTCHHHHHHHH-HHHHHHH-HHGG
T ss_pred HccCCEEEEEEECCCCHHHHHHhH-HHHHHHH-HhcC
Confidence 356788888899999999998852 3444433 3443
No 78
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=35.39 E-value=76 Score=22.91 Aligned_cols=30 Identities=10% Similarity=0.047 Sum_probs=21.5
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHH
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFE 70 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~ 70 (255)
...++-|-.||-+-||.|+.+.- .|..+.+
T Consensus 23 ~~~~~vlv~f~a~wC~~C~~~~p-~~~~~~~ 52 (133)
T 2dj3_A 23 DPKKDVLIEFYAPWCGHCKQLEP-IYTSLGK 52 (133)
T ss_dssp CTTSEEEEEECCTTCSHHHHHHH-HHHHHHH
T ss_pred cCCCcEEEEEECCCChhHHHHHH-HHHHHHH
Confidence 44677888889999999999853 2444433
No 79
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=35.14 E-value=13 Score=28.88 Aligned_cols=16 Identities=6% Similarity=0.169 Sum_probs=14.2
Q ss_pred EEEEEEEeCChhHHHH
Q 043871 45 NLSVYYESLSDTGAEF 60 (255)
Q Consensus 45 ~V~vYyESlCPd~~~F 60 (255)
+|.||.-+.||+|++.
T Consensus 15 ~Vvvysk~~Cp~C~~a 30 (127)
T 3l4n_A 15 PIIIFSKSTCSYSKGM 30 (127)
T ss_dssp SEEEEECTTCHHHHHH
T ss_pred CEEEEEcCCCccHHHH
Confidence 4899999999999876
No 80
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=34.98 E-value=16 Score=24.76 Aligned_cols=16 Identities=6% Similarity=-0.112 Sum_probs=13.5
Q ss_pred EEEEEEEeCChhHHHH
Q 043871 45 NLSVYYESLSDTGAEF 60 (255)
Q Consensus 45 ~V~vYyESlCPd~~~F 60 (255)
+|.+|+-+-||+|++.
T Consensus 2 ~v~~f~~~~C~~C~~~ 17 (85)
T 1ego_A 2 QTVIFGRSGCPYCVRA 17 (85)
T ss_dssp EEEEECCTTSTHHHHH
T ss_pred EEEEEeCCCCCCHHHH
Confidence 5788888999999876
No 81
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=34.88 E-value=66 Score=23.97 Aligned_cols=33 Identities=15% Similarity=0.197 Sum_probs=23.7
Q ss_pred CCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccC
Q 043871 41 DEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTS 75 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (255)
..|+-|-.||-+-||.|+.++. .|..+.+ ++.+
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~-~l~~l~~-~~~~ 65 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIP-DMVQVQK-TWAS 65 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHH-HHHHHHH-HHTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHH-HHHHHHH-Hhcc
Confidence 4567788888999999999863 4666655 3544
No 82
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=34.50 E-value=32 Score=24.57 Aligned_cols=21 Identities=5% Similarity=0.178 Sum_probs=17.8
Q ss_pred CCceEEEEEEEeCChhHHHHH
Q 043871 41 DEKVNLSVYYESLSDTGAEFI 61 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi 61 (255)
..++-|-.||-+-||.|+++.
T Consensus 32 ~~~~~vv~f~a~wC~~C~~~~ 52 (117)
T 2xc2_A 32 KNKLVVVDFFATWCGPCKTIA 52 (117)
T ss_dssp TTSCEEEEEECTTCHHHHHHH
T ss_pred CCCEEEEEEECCCCHhHHHHh
Confidence 567778889999999999884
No 83
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=34.47 E-value=73 Score=23.46 Aligned_cols=40 Identities=15% Similarity=0.189 Sum_probs=26.1
Q ss_pred CCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccCceEEEEEe
Q 043871 41 DEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTSIVNLRLIP 83 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lVP 83 (255)
..|+.|-.||-+-||.|+..+. .|..+.+ ++.+. +++++.
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~-~l~~l~~-~~~~~-~~~vv~ 66 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMP-KIIKTAN-DYKNK-NFQVLA 66 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHH-HHHHHHH-HGGGT-TEEEEE
T ss_pred CCCEEEEEEECCCCccHHHHHH-HHHHHHH-HhccC-CeEEEE
Confidence 4567788888899999998753 4555554 35442 344443
No 84
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=33.97 E-value=13 Score=25.79 Aligned_cols=17 Identities=12% Similarity=-0.015 Sum_probs=14.7
Q ss_pred eEEEEEEEeCChhHHHH
Q 043871 44 VNLSVYYESLSDTGAEF 60 (255)
Q Consensus 44 V~V~vYyESlCPd~~~F 60 (255)
.+|.||+-+.||+|++.
T Consensus 12 ~~v~ly~~~~Cp~C~~~ 28 (92)
T 3ic4_A 12 AEVLMYGLSTCPHCKRT 28 (92)
T ss_dssp SSSEEEECTTCHHHHHH
T ss_pred ceEEEEECCCChHHHHH
Confidence 35889999999999885
No 85
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=33.15 E-value=75 Score=22.55 Aligned_cols=34 Identities=9% Similarity=0.162 Sum_probs=22.5
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccC
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTS 75 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (255)
...++-|-.||-+-||.|+.+.. .|..+.+ .+.+
T Consensus 19 ~~~~~~lv~f~a~~C~~C~~~~~-~~~~~~~-~~~~ 52 (122)
T 3aps_A 19 QGKTHWVVDFYAPWCGPCQNFAP-EFELLAR-MIKG 52 (122)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHH-HHHHHHH-HHTT
T ss_pred cCCCeEEEEEECCCCHHHHHHHH-HHHHHHH-HhcC
Confidence 44567788889999999999843 3444433 3444
No 86
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=33.12 E-value=18 Score=23.69 Aligned_cols=16 Identities=6% Similarity=0.146 Sum_probs=13.5
Q ss_pred EEEEEEEeCChhHHHH
Q 043871 45 NLSVYYESLSDTGAEF 60 (255)
Q Consensus 45 ~V~vYyESlCPd~~~F 60 (255)
.|.+|+-+-||.|++.
T Consensus 2 ~i~~y~~~~C~~C~~~ 17 (75)
T 1r7h_A 2 SITLYTKPACVQCTAT 17 (75)
T ss_dssp CEEEEECTTCHHHHHH
T ss_pred eEEEEeCCCChHHHHH
Confidence 4788999999999875
No 87
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=33.04 E-value=21 Score=25.32 Aligned_cols=16 Identities=6% Similarity=0.071 Sum_probs=13.9
Q ss_pred EEEEEEEeCChhHHHH
Q 043871 45 NLSVYYESLSDTGAEF 60 (255)
Q Consensus 45 ~V~vYyESlCPd~~~F 60 (255)
.|.+|+-+-||+|++.
T Consensus 13 ~v~~f~~~~C~~C~~~ 28 (105)
T 1kte_A 13 KVVVFIKPTCPFCRKT 28 (105)
T ss_dssp CEEEEECSSCHHHHHH
T ss_pred CEEEEEcCCCHhHHHH
Confidence 4788999999999875
No 88
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=32.98 E-value=79 Score=23.05 Aligned_cols=33 Identities=15% Similarity=0.120 Sum_probs=23.1
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhcc
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLT 74 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~ 74 (255)
...|+-|-.|+-+-||.|+..+. .|..+++ ++.
T Consensus 26 ~~gk~vll~F~a~wC~~C~~~~~-~l~~l~~-~~~ 58 (144)
T 1o73_A 26 LVGKTVFLYFSASWCPPCRGFTP-VLAEFYE-KHH 58 (144)
T ss_dssp GTTCEEEEEEECTTCHHHHHHHH-HHHHHHH-HHT
T ss_pred hCCCEEEEEEECcCCHHHHHHHH-HHHHHHH-Hhc
Confidence 34567777888899999998853 3555554 354
No 89
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=32.90 E-value=18 Score=24.29 Aligned_cols=16 Identities=6% Similarity=0.067 Sum_probs=13.7
Q ss_pred EEEEEEEeCChhHHHH
Q 043871 45 NLSVYYESLSDTGAEF 60 (255)
Q Consensus 45 ~V~vYyESlCPd~~~F 60 (255)
+|.+|+-+-||.|++.
T Consensus 2 ~v~~f~~~~C~~C~~~ 17 (81)
T 1h75_A 2 RITIYTRNDCVQCHAT 17 (81)
T ss_dssp CEEEEECTTCHHHHHH
T ss_pred EEEEEcCCCChhHHHH
Confidence 4788999999999875
No 90
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=32.75 E-value=15 Score=27.29 Aligned_cols=16 Identities=6% Similarity=0.239 Sum_probs=13.4
Q ss_pred EEEEEEEeCChhHHHH
Q 043871 45 NLSVYYESLSDTGAEF 60 (255)
Q Consensus 45 ~V~vYyESlCPd~~~F 60 (255)
+|.||.-+-||+|++.
T Consensus 18 ~v~vy~~~~Cp~C~~a 33 (114)
T 3h8q_A 18 RVVIFSKSYCPHSTRV 33 (114)
T ss_dssp SEEEEECTTCHHHHHH
T ss_pred CEEEEEcCCCCcHHHH
Confidence 4778999999999765
No 91
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=32.71 E-value=76 Score=22.32 Aligned_cols=36 Identities=8% Similarity=0.033 Sum_probs=24.6
Q ss_pred CCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccCceE
Q 043871 41 DEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTSIVN 78 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d~vd 78 (255)
..|+-|-.||-+-||.|+..+. .|..+.+ +..+.+.
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~-~l~~~~~-~~~~~~~ 56 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLP-DTDEIAK-EAGDDYV 56 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHH-HHHHHHH-TCTTTEE
T ss_pred CCCEEEEEEEcCcCHHHHHHHH-HHHHHHH-HhCCCcE
Confidence 4567777788899999998854 4666665 3444333
No 92
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=32.59 E-value=55 Score=24.73 Aligned_cols=40 Identities=15% Similarity=0.137 Sum_probs=25.7
Q ss_pred CCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccCceEEEEEe
Q 043871 41 DEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTSIVNLRLIP 83 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lVP 83 (255)
..|+-|-.||-+-||.|+..+. .|..+++ ++.+. ++++|-
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~-~l~~l~~-~~~~~-~~~vv~ 73 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNL-ALRELYN-KYASQ-GFEIYQ 73 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHH-HHHHHHH-HHGGG-TEEEEE
T ss_pred CCCEEEEEEEcCCChhhHHHHH-HHHHHHH-HhccC-CeEEEE
Confidence 3466677777799999998863 4666655 35543 344443
No 93
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=32.57 E-value=40 Score=24.43 Aligned_cols=35 Identities=14% Similarity=0.245 Sum_probs=23.4
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccCc
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTSI 76 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d~ 76 (255)
...++-|-.||-.-||.|+.+.. .|..+.+ .+.+.
T Consensus 33 ~~~~~~lv~f~a~wC~~C~~~~~-~~~~~~~-~~~~~ 67 (130)
T 2dml_A 33 QSDGLWLVEFYAPWCGHCQRLTP-EWKKAAT-ALKDV 67 (130)
T ss_dssp TCSSCEEEEEECTTCSTTGGGHH-HHHHHHH-HTTTT
T ss_pred cCCCeEEEEEECCCCHHHHhhCH-HHHHHHH-HhcCc
Confidence 44677888899999999998843 2433333 35543
No 94
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=32.50 E-value=59 Score=25.12 Aligned_cols=42 Identities=17% Similarity=0.177 Sum_probs=27.8
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccCceEEEEEe
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTSIVNLRLIP 83 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lVP 83 (255)
...|+-|-.||-+-||.|+.++- .|..+++ ++.+--++++|.
T Consensus 46 ~~gk~vll~F~a~wC~~C~~~~p-~l~~l~~-~~~~~~~v~vv~ 87 (165)
T 3s9f_A 46 LSGKTVFFYFSASWCPPCRGFTP-QLVEFYE-KHHDSKNFEIIL 87 (165)
T ss_dssp GTTSEEEEEEECTTCHHHHHHHH-HHHHHHH-HHTTTTTEEEEE
T ss_pred cCCCEEEEEEECCcChhHHHHHH-HHHHHHH-HhccCCCeEEEE
Confidence 34577788888999999999863 4666655 455422455543
No 95
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.14 E-value=29 Score=25.70 Aligned_cols=16 Identities=25% Similarity=0.135 Sum_probs=14.3
Q ss_pred eEEEEEEEeCChhHHH
Q 043871 44 VNLSVYYESLSDTGAE 59 (255)
Q Consensus 44 V~V~vYyESlCPd~~~ 59 (255)
.+|.||.-+.||+|..
T Consensus 8 m~V~vy~~~~C~~C~~ 23 (111)
T 2ct6_A 8 MVIRVFIASSSGFVAI 23 (111)
T ss_dssp CCEEEEECSSCSCHHH
T ss_pred cEEEEEEcCCCCCccc
Confidence 4789999999999984
No 96
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=31.96 E-value=55 Score=24.07 Aligned_cols=40 Identities=13% Similarity=0.178 Sum_probs=25.3
Q ss_pred CCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccCceEEEEE
Q 043871 41 DEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTSIVNLRLI 82 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lV 82 (255)
..|+-|-.||-+-||.|+.++- .|..+++ ++.+.-+++++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~-~l~~l~~-~~~~~~~~~vv 66 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTP-QLIDFYK-AHAEKKNFEVM 66 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHH-HHHHHHH-HHTTTTTEEEE
T ss_pred CCCEEEEEEECCCCHHHHHHHH-HHHHHHH-HhccCCCEEEE
Confidence 4567777788899999998863 4555554 35431234443
No 97
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=31.93 E-value=51 Score=24.73 Aligned_cols=19 Identities=26% Similarity=0.188 Sum_probs=16.1
Q ss_pred CceEEEEEEEeCChhHHHH
Q 043871 42 EKVNLSVYYESLSDTGAEF 60 (255)
Q Consensus 42 ~kV~V~vYyESlCPd~~~F 60 (255)
....|.+|+-.-||.|+..
T Consensus 28 ~m~~vv~y~~~~C~~C~~a 46 (107)
T 2fgx_A 28 EPRKLVVYGREGCHLCEEM 46 (107)
T ss_dssp CCCCEEEEECSSCHHHHHH
T ss_pred CccEEEEEeCCCChhHHHH
Confidence 3467999999999999876
No 98
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=31.82 E-value=34 Score=26.37 Aligned_cols=29 Identities=24% Similarity=0.232 Sum_probs=21.8
Q ss_pred hhHHHHHHHHHHhhhcCCCCceeeEEEECCeecC
Q 043871 168 TGRWLELIYAAETERLKPPIQFVPWLTLNGDAVG 201 (255)
Q Consensus 168 ~G~~Ll~~~~~~T~~l~P~~~~VPwI~iNG~~~~ 201 (255)
.+.++.....+.|. .+.||-|.|||++++
T Consensus 60 ~~~~~r~~l~~~sg-----~~TvPqIFI~g~~IG 88 (118)
T 2wul_A 60 DDPELRQGIKDYSN-----WPTIPQVYLNGEFVG 88 (118)
T ss_dssp SCHHHHHHHHHHHT-----CCSSCEEEETTEEEE
T ss_pred CCHHHHHHHHHhcc-----CCCCCeEeECCEEEC
Confidence 45567667766774 256999999999986
No 99
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=31.78 E-value=24 Score=24.99 Aligned_cols=14 Identities=29% Similarity=0.465 Sum_probs=11.8
Q ss_pred EEEEEEEeCChhHH
Q 043871 45 NLSVYYESLSDTGA 58 (255)
Q Consensus 45 ~V~vYyESlCPd~~ 58 (255)
+|.||.-+.||+|.
T Consensus 3 ~v~ly~~~~C~~c~ 16 (93)
T 1t1v_A 3 GLRVYSTSVTGSRE 16 (93)
T ss_dssp CEEEEECSSCSCHH
T ss_pred CEEEEEcCCCCCch
Confidence 57889999999993
No 100
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=31.75 E-value=74 Score=23.65 Aligned_cols=34 Identities=9% Similarity=0.118 Sum_probs=22.8
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccC
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTS 75 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (255)
...++-|-.||-+-||.|+++.. .|..+.+ .+.+
T Consensus 22 ~~~~~vlv~F~a~wC~~C~~~~~-~l~~l~~-~~~~ 55 (140)
T 3hz4_A 22 DSKKPVVVMFYSPACPYCKAMEP-YFEEYAK-EYGS 55 (140)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHH-HHHHHHH-HHTT
T ss_pred hCCCcEEEEEECCCChhHHHHHH-HHHHHHH-HhCC
Confidence 34677788889999999999842 3433333 3444
No 101
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=31.69 E-value=84 Score=22.09 Aligned_cols=30 Identities=0% Similarity=0.050 Sum_probs=21.2
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHH
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFE 70 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~ 70 (255)
...++-|-.||-+-||.|+.+.. .|..+.+
T Consensus 24 ~~~k~vlv~f~a~~C~~C~~~~~-~l~~l~~ 53 (112)
T 1syr_A 24 SQNELVIVDFFAEWCGPCKRIAP-FYEECSK 53 (112)
T ss_dssp HHCSEEEEEEECTTCHHHHHHHH-HHHHHHH
T ss_pred ccCCeEEEEEECCCCHHHHHHHH-HHHHHHH
Confidence 35677788888999999999853 3444443
No 102
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=31.48 E-value=85 Score=22.12 Aligned_cols=30 Identities=13% Similarity=0.179 Sum_probs=21.5
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHH
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFE 70 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~ 70 (255)
...++-|-.||-+-||.|+.+. ..|..+.+
T Consensus 22 ~~~k~vlv~f~a~wC~~C~~~~-p~l~~l~~ 51 (109)
T 3f3q_A 22 AQDKLVVVDFYATWCGPCKMIA-PMIEKFSE 51 (109)
T ss_dssp TSSSCEEEEEECTTCHHHHHHH-HHHHHHHH
T ss_pred hcCCEEEEEEECCcCHhHHHHH-HHHHHHHH
Confidence 4577788888999999999885 23444433
No 103
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=31.46 E-value=67 Score=23.08 Aligned_cols=34 Identities=9% Similarity=0.168 Sum_probs=22.7
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccC
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTS 75 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (255)
...++-|-.||-+-||.|+.+.. .|..+.+ ++.+
T Consensus 28 ~~~k~vvv~F~a~wC~~C~~~~p-~l~~~~~-~~~~ 61 (114)
T 2oe3_A 28 KQNDKLVIDFYATWCGPCKMMQP-HLTKLIQ-AYPD 61 (114)
T ss_dssp HHCSEEEEEEECTTCHHHHHTHH-HHHHHHH-HCTT
T ss_pred hCCCEEEEEEECCCCHHHHHHHH-HHHHHHH-HCCC
Confidence 34567788889999999998853 3444433 3444
No 104
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=31.39 E-value=78 Score=22.41 Aligned_cols=29 Identities=14% Similarity=0.056 Sum_probs=21.1
Q ss_pred CCceEEEEEEEeCChhHHHHHHHhhHHHHH
Q 043871 41 DEKVNLSVYYESLSDTGAEFITHDLGKVFE 70 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~ 70 (255)
..|+.|-.||-+-||.|+.++. .|..+.+
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~~-~l~~~~~ 52 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEAP-VVGQVAA 52 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHH-HHHHHHH
T ss_pred CCCeEEEEEEcCCChhHHHHHH-HHHHHHH
Confidence 4566777888999999999853 4555554
No 105
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=31.28 E-value=20 Score=24.88 Aligned_cols=16 Identities=13% Similarity=0.077 Sum_probs=14.0
Q ss_pred EEEEEEEeCChhHHHH
Q 043871 45 NLSVYYESLSDTGAEF 60 (255)
Q Consensus 45 ~V~vYyESlCPd~~~F 60 (255)
+|.+|+-+.||+|++.
T Consensus 7 ~v~ly~~~~C~~C~~~ 22 (92)
T 2khp_A 7 DVIIYTRPGCPYCARA 22 (92)
T ss_dssp CEEEEECTTCHHHHHH
T ss_pred cEEEEECCCChhHHHH
Confidence 5889999999999875
No 106
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=31.06 E-value=42 Score=24.70 Aligned_cols=46 Identities=20% Similarity=0.224 Sum_probs=26.9
Q ss_pred HhhcCCChhhhhhhhcCchhHHHHHHHHHHhhhcCCCCceeeEEEECCeecC
Q 043871 150 CQNLKLSPNLIKDCYDNGTGRWLELIYAAETERLKPPIQFVPWLTLNGDAVG 201 (255)
Q Consensus 150 a~~~gl~~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iNG~~~~ 201 (255)
.++.|++++.+. --....+.++.....+.+ +...||.|.|||++++
T Consensus 37 L~~~~i~~~~~d-vd~~~~~~~~~~~l~~~~-----g~~tvP~vfi~g~~ig 82 (114)
T 3h8q_A 37 FSSLGVECNVLE-LDQVDDGARVQEVLSEIT-----NQKTVPNIFVNKVHVG 82 (114)
T ss_dssp HHHTTCCCEEEE-TTTSTTHHHHHHHHHHHH-----SCCSSCEEEETTEEEE
T ss_pred HHHcCCCcEEEE-ecCCCChHHHHHHHHHHh-----CCCccCEEEECCEEEe
Confidence 344566554332 111234556555554555 3478999999999875
No 107
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=31.00 E-value=72 Score=23.27 Aligned_cols=21 Identities=5% Similarity=-0.029 Sum_probs=17.9
Q ss_pred CCceEEEEEEEeCChhHHHHH
Q 043871 41 DEKVNLSVYYESLSDTGAEFI 61 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi 61 (255)
..++-|-.||-+-||.|+.+.
T Consensus 37 ~~k~vvv~f~a~wC~~C~~~~ 57 (124)
T 1xfl_A 37 SKTLVVVDFTASWCGPCRFIA 57 (124)
T ss_dssp TTCEEEEEEECTTCHHHHHHH
T ss_pred cCCEEEEEEECCCCHHHHHHH
Confidence 467788889999999999985
No 108
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=30.80 E-value=58 Score=23.05 Aligned_cols=21 Identities=14% Similarity=0.221 Sum_probs=17.3
Q ss_pred CCceEEEEEEEeCChhHHHHH
Q 043871 41 DEKVNLSVYYESLSDTGAEFI 61 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi 61 (255)
..++-|-.||-+-||.|+.+.
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~ 36 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIA 36 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHH
T ss_pred CCCEEEEEEECCCCHHHHHHH
Confidence 456777888899999999885
No 109
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=30.22 E-value=47 Score=23.78 Aligned_cols=32 Identities=9% Similarity=0.008 Sum_probs=22.5
Q ss_pred CCceEEEEEEEeCChhHHHHHHHhhHHHHHhhcc
Q 043871 41 DEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLT 74 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~ 74 (255)
..|+-|-.||-+-||.|+..+ ..|..+.+ ++.
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~-~~l~~~~~-~~~ 54 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEA-PSLSQVAA-ANP 54 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHH-HHHHHHHH-HCT
T ss_pred CCCEEEEEEECCcChhHHHHH-HHHHHHHH-HCC
Confidence 456777778899999999975 34555554 344
No 110
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=30.17 E-value=75 Score=22.76 Aligned_cols=21 Identities=5% Similarity=0.077 Sum_probs=18.1
Q ss_pred CCceEEEEEEEeCChhHHHHH
Q 043871 41 DEKVNLSVYYESLSDTGAEFI 61 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi 61 (255)
..++-|-.||-+-||.|+.+.
T Consensus 30 ~~k~vlv~F~a~wC~~C~~~~ 50 (116)
T 3qfa_C 30 GDKLVVVDFSATWCGPSKMIK 50 (116)
T ss_dssp TTSCEEEEEECTTCHHHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHH
Confidence 677788889999999999884
No 111
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=29.94 E-value=18 Score=26.73 Aligned_cols=16 Identities=0% Similarity=0.227 Sum_probs=13.0
Q ss_pred EEEEEEEe-----CChhHHHH
Q 043871 45 NLSVYYES-----LSDTGAEF 60 (255)
Q Consensus 45 ~V~vYyES-----lCPd~~~F 60 (255)
+|.||..+ .||+|++.
T Consensus 19 ~Vvvy~k~t~~~p~Cp~C~~a 39 (109)
T 3ipz_A 19 KVVLFMKGTRDFPMCGFSNTV 39 (109)
T ss_dssp SEEEEESBCSSSBSSHHHHHH
T ss_pred CEEEEEecCCCCCCChhHHHH
Confidence 47788887 89999886
No 112
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=29.63 E-value=52 Score=25.27 Aligned_cols=30 Identities=33% Similarity=0.315 Sum_probs=20.6
Q ss_pred chhHHHHHHHHHHhhhcCCCCceeeEEEECCeecC
Q 043871 167 GTGRWLELIYAAETERLKPPIQFVPWLTLNGDAVG 201 (255)
Q Consensus 167 ~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iNG~~~~ 201 (255)
..|.++.....+.|. ...||.|.|||++++
T Consensus 53 ~d~~~~~~~l~~~~G-----~~tVP~IfI~G~~IG 82 (127)
T 3l4n_A 53 GHGEELQEYIKLVTG-----RGTVPNLLVNGVSRG 82 (127)
T ss_dssp TTHHHHHHHHHHHHS-----CCSSCEEEETTEECC
T ss_pred CCHHHHHHHHHHHcC-----CCCcceEEECCEEEc
Confidence 345555554444453 468999999999976
No 113
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=28.75 E-value=61 Score=26.16 Aligned_cols=29 Identities=14% Similarity=0.130 Sum_probs=21.9
Q ss_pred CCCceEEEEEEEe-CChhHHHHHHHhhHHHHH
Q 043871 40 QDEKVNLSVYYES-LSDTGAEFITHDLGKVFE 70 (255)
Q Consensus 40 ~~~kV~V~vYyES-lCPd~~~Fi~~qL~P~~~ 70 (255)
...+|.|.+|+.. -||.|... .++.|.+.
T Consensus 19 ~~~~v~v~~~~~~~~~~~C~~c--~~~~~~~~ 48 (229)
T 2ywm_A 19 FKEPVSIKLFSQAIGCESCQTA--EELLKETV 48 (229)
T ss_dssp CCSCEEEEEECCCTTCGGGGHH--HHHHHHHH
T ss_pred ccCCeEEEEEccCCCCcccHHH--HHHHHHHH
Confidence 3467888888876 58888876 56788776
No 114
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=28.54 E-value=35 Score=24.95 Aligned_cols=40 Identities=8% Similarity=0.099 Sum_probs=26.7
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccCceEEEEE
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTSIVNLRLI 82 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lV 82 (255)
...|+-|-.||-+-||.|+..+. .|..+++ ++.+. +++++
T Consensus 29 ~~gk~vll~f~~~~C~~C~~~~~-~l~~l~~-~~~~~-~~~~v 68 (148)
T 3hcz_A 29 VQAKYTILFFWDSQCGHCQQETP-KLYDWWL-KNRAK-GIQVY 68 (148)
T ss_dssp CCCSEEEEEEECGGGCTTCSHHH-HHHHHHH-HHGGG-TEEEE
T ss_pred cCCCEEEEEEECCCCccHHHHHH-HHHHHHH-HhccC-CEEEE
Confidence 35577788888999999998853 4555555 35543 34444
No 115
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=28.37 E-value=1e+02 Score=22.73 Aligned_cols=29 Identities=3% Similarity=0.109 Sum_probs=21.3
Q ss_pred CCceEEEEEEEeCChhHHHHHHHhhHHHHH
Q 043871 41 DEKVNLSVYYESLSDTGAEFITHDLGKVFE 70 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~ 70 (255)
..|+-|-.||-+-||.|+..+. .|..+.+
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~-~l~~~~~ 53 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFP-YMANQYK 53 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHH-HHHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHH-HHHHHHH
Confidence 4567788888999999998753 3555554
No 116
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=28.29 E-value=1.1e+02 Score=22.50 Aligned_cols=33 Identities=9% Similarity=0.033 Sum_probs=21.5
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccC
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTS 75 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (255)
..++ -|-.||-+-||.|+.+. ..|..+.. .+.+
T Consensus 49 ~~~~-vvv~f~~~~C~~C~~~~-~~l~~l~~-~~~~ 81 (140)
T 1v98_A 49 GAPL-TLVDFFAPWCGPCRLVS-PILEELAR-DHAG 81 (140)
T ss_dssp CCCE-EEEEEECTTCHHHHHHH-HHHHHHHH-HTTT
T ss_pred cCCC-EEEEEECCCCHHHHHHH-HHHHHHHH-HccC
Confidence 4455 67778888999999985 33444443 3544
No 117
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=28.27 E-value=1e+02 Score=21.42 Aligned_cols=29 Identities=10% Similarity=0.121 Sum_probs=20.6
Q ss_pred CCceEEEEEEEeCChhHHHHHHHhhHHHHH
Q 043871 41 DEKVNLSVYYESLSDTGAEFITHDLGKVFE 70 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~ 70 (255)
..++-|-.||-+-||.|+.+.. .|..+..
T Consensus 23 ~~~~vlv~f~a~wC~~C~~~~~-~l~~~~~ 51 (111)
T 2pu9_C 23 GDKPVVLDMFTQWCGPSKAMAP-KYEKLAE 51 (111)
T ss_dssp TTSCEEEEEECTTCHHHHHHHH-HHHHHHH
T ss_pred CCCEEEEEEECCcCHhHHHHCH-HHHHHHH
Confidence 4667788888999999998853 3444433
No 118
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=28.12 E-value=1e+02 Score=22.87 Aligned_cols=33 Identities=12% Similarity=0.016 Sum_probs=23.1
Q ss_pred CCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccC
Q 043871 41 DEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTS 75 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (255)
..|+-|-.|+-+-||.|+..+. .|..+++ ++.+
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~-~l~~l~~-~~~~ 60 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETP-YLLKTYN-AFKD 60 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHH-HHHHHHH-HHTT
T ss_pred CCCEEEEEEECCCChhHHHHHH-HHHHHHH-Hhcc
Confidence 4577787888899999998853 3555554 3444
No 119
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=28.08 E-value=25 Score=25.58 Aligned_cols=15 Identities=13% Similarity=0.286 Sum_probs=13.5
Q ss_pred EEEEEEeCChhHHHH
Q 043871 46 LSVYYESLSDTGAEF 60 (255)
Q Consensus 46 V~vYyESlCPd~~~F 60 (255)
|.+|.-+-||+|++.
T Consensus 21 v~vy~~~~Cp~C~~~ 35 (113)
T 3rhb_A 21 VVIYSKTWCSYCTEV 35 (113)
T ss_dssp EEEEECTTCHHHHHH
T ss_pred EEEEECCCChhHHHH
Confidence 888999999999866
No 120
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=27.91 E-value=73 Score=23.92 Aligned_cols=39 Identities=18% Similarity=0.251 Sum_probs=25.0
Q ss_pred CCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccCceEEEEE
Q 043871 41 DEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTSIVNLRLI 82 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lV 82 (255)
..|+-|-.|+-+-||.|+..+. .|..+++ ++.+. ++++|
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~-~l~~l~~-~~~~~-~~~vv 69 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYA-EMNQLYE-KYKDQ-GLEIL 69 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHH-HHHHHHH-HHGGG-TEEEE
T ss_pred CCCEEEEEEEeccCCccHHHHH-HHHHHHH-HhccC-CEEEE
Confidence 4566777777799999998753 4555555 35443 34444
No 121
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.50 E-value=91 Score=22.32 Aligned_cols=22 Identities=14% Similarity=0.237 Sum_probs=18.2
Q ss_pred CCCceEEEEEEEeCChhHHHHH
Q 043871 40 QDEKVNLSVYYESLSDTGAEFI 61 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi 61 (255)
...++-|-.||-+-||.|+.+.
T Consensus 23 ~~~~~~lv~f~a~wC~~C~~~~ 44 (133)
T 1x5d_A 23 DSEDVWMVEFYAPWCGHCKNLE 44 (133)
T ss_dssp TSSSEEEEEEECTTCHHHHTHH
T ss_pred cCCCeEEEEEECCCCHHHHhhc
Confidence 4467788889999999999884
No 122
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=27.10 E-value=88 Score=21.48 Aligned_cols=20 Identities=10% Similarity=0.265 Sum_probs=16.8
Q ss_pred CceEEEEEEEeCChhHHHHH
Q 043871 42 EKVNLSVYYESLSDTGAEFI 61 (255)
Q Consensus 42 ~kV~V~vYyESlCPd~~~Fi 61 (255)
.++-|-.||-+-||.|+.+.
T Consensus 21 ~~~~lv~f~~~~C~~C~~~~ 40 (111)
T 3uvt_A 21 EGITFIKFYAPWCGHCKTLA 40 (111)
T ss_dssp SSEEEEEEECSSCHHHHHHH
T ss_pred CCcEEEEEECCCChhHHHhh
Confidence 55678889999999999874
No 123
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=27.04 E-value=29 Score=25.47 Aligned_cols=16 Identities=0% Similarity=0.052 Sum_probs=14.2
Q ss_pred EEEEEEEeCChhHHHH
Q 043871 45 NLSVYYESLSDTGAEF 60 (255)
Q Consensus 45 ~V~vYyESlCPd~~~F 60 (255)
.|.+|+-+-||+|++.
T Consensus 20 ~vv~f~~~~Cp~C~~~ 35 (114)
T 2hze_A 20 KVTIFVKYTCPFCRNA 35 (114)
T ss_dssp CEEEEECTTCHHHHHH
T ss_pred CEEEEEeCCChhHHHH
Confidence 5889999999999866
No 124
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=26.90 E-value=1.1e+02 Score=22.37 Aligned_cols=32 Identities=13% Similarity=0.224 Sum_probs=22.4
Q ss_pred CCceEEEEEEEeCChhHHHHHHHhhHHHHHhhcc
Q 043871 41 DEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLT 74 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~ 74 (255)
..|+-|-.||-+-||.|+.++- .|..+++ ++.
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p-~l~~l~~-~~~ 58 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTP-QLIEFYD-KFH 58 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHH-HHHHHHH-HHT
T ss_pred CCCEEEEEEEccCCHHHHHHHH-HHHHHHH-Hhh
Confidence 4567777788899999998863 3555554 354
No 125
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=26.88 E-value=22 Score=26.54 Aligned_cols=16 Identities=0% Similarity=0.077 Sum_probs=12.3
Q ss_pred EEEEEEE-----eCChhHHHH
Q 043871 45 NLSVYYE-----SLSDTGAEF 60 (255)
Q Consensus 45 ~V~vYyE-----SlCPd~~~F 60 (255)
+|.||.. +.||+|++-
T Consensus 17 ~Vvlf~kg~~~~~~Cp~C~~a 37 (111)
T 3zyw_A 17 PCMLFMKGTPQEPRCGFSKQM 37 (111)
T ss_dssp SEEEEESBCSSSBSSHHHHHH
T ss_pred CEEEEEecCCCCCcchhHHHH
Confidence 4677887 888888776
No 126
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=26.65 E-value=48 Score=25.03 Aligned_cols=28 Identities=21% Similarity=0.152 Sum_probs=19.5
Q ss_pred hHHHHHHHHHHhhhcCCCCceeeEEEECCeecC
Q 043871 169 GRWLELIYAAETERLKPPIQFVPWLTLNGDAVG 201 (255)
Q Consensus 169 G~~Ll~~~~~~T~~l~P~~~~VPwI~iNG~~~~ 201 (255)
+.++.....+.|. ...||.|.|||++++
T Consensus 59 ~~~~~~~l~~~sg-----~~tvP~vfI~g~~iG 86 (121)
T 3gx8_A 59 DPELREGIKEFSE-----WPTIPQLYVNKEFIG 86 (121)
T ss_dssp CHHHHHHHHHHHT-----CCSSCEEEETTEEEE
T ss_pred CHHHHHHHHHHhC-----CCCCCeEEECCEEEe
Confidence 3455555555553 467999999999975
No 127
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=26.52 E-value=82 Score=21.84 Aligned_cols=22 Identities=5% Similarity=0.061 Sum_probs=17.9
Q ss_pred CCCceEEEEEEEeCChhHHHHH
Q 043871 40 QDEKVNLSVYYESLSDTGAEFI 61 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi 61 (255)
...++-|-.||-+-||.|+.+.
T Consensus 16 ~~~~~vlv~f~a~wC~~C~~~~ 37 (105)
T 4euy_A 16 EEQQLVLLFIKTENCGVCDVML 37 (105)
T ss_dssp TCSSEEEEEEEESSCHHHHHHH
T ss_pred hcCCCEEEEEeCCCCcchHHHH
Confidence 4567778888999999999973
No 128
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=25.83 E-value=1.4e+02 Score=21.91 Aligned_cols=33 Identities=9% Similarity=0.178 Sum_probs=23.9
Q ss_pred CCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccC
Q 043871 41 DEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTS 75 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (255)
..|+-|-.||-+-||.|+..+. .|..+.+ ++.+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~-~l~~~~~-~~~~ 59 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIP-SMMRLNA-AMAG 59 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHH-HHHHHHH-HTTT
T ss_pred CCCEEEEEEECCCCHHHHHHHH-HHHHHHH-Hhcc
Confidence 4577788888999999999864 4666655 4554
No 129
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=25.59 E-value=33 Score=24.74 Aligned_cols=15 Identities=0% Similarity=0.180 Sum_probs=12.8
Q ss_pred EEEEEE-----eCChhHHHH
Q 043871 46 LSVYYE-----SLSDTGAEF 60 (255)
Q Consensus 46 V~vYyE-----SlCPd~~~F 60 (255)
|.||+- +-||+|++.
T Consensus 19 vvvf~~g~~~~~~C~~C~~~ 38 (105)
T 2yan_A 19 VMLFMKGNKQEAKCGFSKQI 38 (105)
T ss_dssp EEEEESBCSSSBCTTHHHHH
T ss_pred EEEEEecCCCCCCCccHHHH
Confidence 777988 999999875
No 130
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=25.32 E-value=1.2e+02 Score=21.13 Aligned_cols=20 Identities=10% Similarity=0.016 Sum_probs=17.1
Q ss_pred CceEEEEEEEeCChhHHHHH
Q 043871 42 EKVNLSVYYESLSDTGAEFI 61 (255)
Q Consensus 42 ~kV~V~vYyESlCPd~~~Fi 61 (255)
.++-|-.||.+-||.|+.+.
T Consensus 28 ~~~~vv~f~~~~C~~C~~~~ 47 (118)
T 2vm1_A 28 GKLVIIDFTASWCGPCRVIA 47 (118)
T ss_dssp TCCEEEEEECTTCHHHHHHH
T ss_pred CCEEEEEEECCCCHhHHHHh
Confidence 56778888999999999985
No 131
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=25.27 E-value=56 Score=24.86 Aligned_cols=29 Identities=21% Similarity=0.319 Sum_probs=20.8
Q ss_pred hhHHHHHHHHHHhhhcCCCCceeeEEEECCeecC
Q 043871 168 TGRWLELIYAAETERLKPPIQFVPWLTLNGDAVG 201 (255)
Q Consensus 168 ~G~~Ll~~~~~~T~~l~P~~~~VPwI~iNG~~~~ 201 (255)
.|.++..+..+++. ...||.|.|||+++.
T Consensus 78 ~~~~~~~~L~~~~g-----~~tVP~vfi~g~~ig 106 (129)
T 3ctg_A 78 NGSEIQDALEEISG-----QKTVPNVYINGKHIG 106 (129)
T ss_dssp THHHHHHHHHHHHS-----CCSSCEEEETTEEEE
T ss_pred CHHHHHHHHHHHhC-----CCCCCEEEECCEEEc
Confidence 45566656665553 467999999999875
No 132
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=25.25 E-value=19 Score=24.90 Aligned_cols=16 Identities=6% Similarity=0.015 Sum_probs=13.9
Q ss_pred EEEEEEEeCChhHHHH
Q 043871 45 NLSVYYESLSDTGAEF 60 (255)
Q Consensus 45 ~V~vYyESlCPd~~~F 60 (255)
+|.+|+-+.||+|++.
T Consensus 7 ~v~~y~~~~C~~C~~~ 22 (89)
T 2klx_A 7 EIILYTRPNCPYCKRA 22 (89)
T ss_dssp CEEEESCSCCTTTHHH
T ss_pred eEEEEECCCChhHHHH
Confidence 5788999999999875
No 133
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=25.09 E-value=1.5e+02 Score=21.90 Aligned_cols=32 Identities=6% Similarity=0.127 Sum_probs=23.9
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhc
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDL 73 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l 73 (255)
...|+-|-.||-+-||.|+..+. .|..+++ ++
T Consensus 22 ~~gk~vlv~F~a~wC~~C~~~~~-~l~~l~~-~~ 53 (151)
T 3raz_A 22 LKAPVRIVNLWATWCGPCRKEMP-AMSKWYK-AQ 53 (151)
T ss_dssp CCSSEEEEEEECTTCHHHHHHHH-HHHHHHH-TS
T ss_pred hCCCEEEEEEEcCcCHHHHHHHH-HHHHHHH-Hh
Confidence 35678888889999999999864 4666655 34
No 134
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=25.07 E-value=1.1e+02 Score=21.84 Aligned_cols=21 Identities=5% Similarity=0.078 Sum_probs=17.4
Q ss_pred CCceEEEEEEEeCChhHHHHH
Q 043871 41 DEKVNLSVYYESLSDTGAEFI 61 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi 61 (255)
..++-|-.||-+-||.|+.+.
T Consensus 22 ~~~~vlv~f~a~wC~~C~~~~ 42 (118)
T 2f51_A 22 APGLVLVDFFATWCGPCQRLG 42 (118)
T ss_dssp CSSCEEEEEECTTCHHHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHH
Confidence 356778888999999999884
No 135
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=24.96 E-value=94 Score=24.04 Aligned_cols=39 Identities=13% Similarity=0.054 Sum_probs=27.0
Q ss_pred CCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccCceEEEEEe
Q 043871 41 DEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTSIVNLRLIP 83 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lVP 83 (255)
..|+-|-.|+-+-||.|+..+. .|..+++ ++.+. +++|-
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~-~l~~l~~-~~~~~--~~~v~ 70 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIG-ELVALAE-RYRGK--VAFVG 70 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHH-HHHHHHH-HTTTT--EEEEE
T ss_pred CCCEEEEEEECCCCccHHHHHH-HHHHHHH-HhhcC--eEEEE
Confidence 4577788888999999997763 4666655 46654 55543
No 136
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=24.87 E-value=29 Score=25.36 Aligned_cols=16 Identities=0% Similarity=0.187 Sum_probs=13.7
Q ss_pred EEEEEEE-----eCChhHHHH
Q 043871 45 NLSVYYE-----SLSDTGAEF 60 (255)
Q Consensus 45 ~V~vYyE-----SlCPd~~~F 60 (255)
+|.||+- +.||+|++.
T Consensus 16 ~vvvy~~g~~~~~~Cp~C~~a 36 (109)
T 1wik_A 16 SVMLFMKGNKQEAKCGFSKQI 36 (109)
T ss_dssp SEEEEESSTTTCCCSSTHHHH
T ss_pred CEEEEEecCCCCCCCchHHHH
Confidence 3778999 899999876
No 137
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=24.81 E-value=1.5e+02 Score=21.38 Aligned_cols=21 Identities=10% Similarity=0.033 Sum_probs=16.3
Q ss_pred CCceEEEEEEEe-------CChhHHHHH
Q 043871 41 DEKVNLSVYYES-------LSDTGAEFI 61 (255)
Q Consensus 41 ~~kV~V~vYyES-------lCPd~~~Fi 61 (255)
..++-|-.||-+ -||+|+.+.
T Consensus 23 ~~~~v~v~F~a~~~~~~~~wC~~C~~~~ 50 (123)
T 1wou_A 23 NGKTIFAYFTGSKDAGGKSWCPDCVQAE 50 (123)
T ss_dssp TTSEEEEEEECCBCTTCCBSCHHHHHHH
T ss_pred CCCEEEEEEEccCCCCCCCcCHHHHHhh
Confidence 356667777788 999999884
No 138
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=24.76 E-value=1.1e+02 Score=22.96 Aligned_cols=40 Identities=18% Similarity=0.188 Sum_probs=25.2
Q ss_pred CCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccCceEEEEEe
Q 043871 41 DEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTSIVNLRLIP 83 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lVP 83 (255)
..|+-|-.|+-+-||.|+..+. .|..+++ ++.+. ++++|-
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~-~l~~l~~-~~~~~-~~~vv~ 69 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYR-QLQEMHT-RLVGK-GLRILA 69 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHH-HHHHHHH-HHGGG-TEEEEE
T ss_pred CCCEEEEEEeeccCCchHHHHH-HHHHHHH-HhhcC-CeEEEE
Confidence 4566777777799999998753 4666655 35442 344443
No 139
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=24.71 E-value=1.3e+02 Score=22.27 Aligned_cols=34 Identities=9% Similarity=0.121 Sum_probs=23.3
Q ss_pred CCCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccC
Q 043871 40 QDEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTS 75 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (255)
...++-|-.||-+-||.|+.+. ..|..+.+ .+.+
T Consensus 53 ~~~k~vlv~F~a~wC~~C~~~~-p~l~~~~~-~~~~ 86 (148)
T 3p2a_A 53 QDDLPMVIDFWAPWCGPCRSFA-PIFAETAA-ERAG 86 (148)
T ss_dssp TCSSCEEEEEECSSCHHHHHHH-HHHHHHHH-HTTT
T ss_pred hcCCcEEEEEECCCCHHHHHHH-HHHHHHHH-HcCC
Confidence 4567778888899999999984 33444444 3444
No 140
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=24.61 E-value=37 Score=24.27 Aligned_cols=15 Identities=7% Similarity=0.149 Sum_probs=12.6
Q ss_pred EEEEEEeCChhHHHH
Q 043871 46 LSVYYESLSDTGAEF 60 (255)
Q Consensus 46 V~vYyESlCPd~~~F 60 (255)
|.+||-+-||.|+.+
T Consensus 22 vv~f~a~~C~~C~~~ 36 (116)
T 2e7p_A 22 VVVFSKTYCGYCNRV 36 (116)
T ss_dssp EEEEECTTCHHHHHH
T ss_pred EEEEECCCChhHHHH
Confidence 455999999999876
No 141
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=24.52 E-value=49 Score=27.11 Aligned_cols=41 Identities=10% Similarity=0.079 Sum_probs=27.5
Q ss_pred CceEEEEEEEeCChhHHHHHHHhhH---HHHHhhccCceEEEEEee
Q 043871 42 EKVNLSVYYESLSDTGAEFITHDLG---KVFEKDLTSIVNLRLIPW 84 (255)
Q Consensus 42 ~kV~V~vYyESlCPd~~~Fi~~qL~---P~~~~~l~d~vdl~lVP~ 84 (255)
.++.|.-||---||.|++|- ..+ +-+.+.+.+.+.|..+|.
T Consensus 113 ~~~~vveFf~~~C~~C~~~~--p~~~~~~~l~~~~~~~v~~~~~~v 156 (197)
T 1un2_A 113 GAPQVLEFFSFFCPHCYQFE--EVLHISDNVKKKLPEGVKMTKYHV 156 (197)
T ss_dssp TCCSEEEEECTTCHHHHHHH--HTSCHHHHHTTSSCTTCCEEEEEC
T ss_pred CCCEEEEEECCCChhHHHhC--cccccHHHHHHHCCCCCEEEEecc
Confidence 55677778889999999993 233 333335566677777764
No 142
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=24.09 E-value=26 Score=26.60 Aligned_cols=16 Identities=6% Similarity=0.175 Sum_probs=12.7
Q ss_pred EEEEEEEe-----CChhHHHH
Q 043871 45 NLSVYYES-----LSDTGAEF 60 (255)
Q Consensus 45 ~V~vYyES-----lCPd~~~F 60 (255)
+|.||..+ .||+|.+.
T Consensus 21 ~Vvvfsk~t~~~p~Cp~C~~a 41 (118)
T 2wem_A 21 KVVVFLKGTPEQPQCGFSNAV 41 (118)
T ss_dssp SEEEEESBCSSSBSSHHHHHH
T ss_pred CEEEEEecCCCCCccHHHHHH
Confidence 47788887 89999876
No 143
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=24.06 E-value=1.1e+02 Score=19.58 Aligned_cols=17 Identities=6% Similarity=0.096 Sum_probs=12.8
Q ss_pred eEEEEEEEeCChhHHHHH
Q 043871 44 VNLSVYYESLSDTGAEFI 61 (255)
Q Consensus 44 V~V~vYyESlCPd~~~Fi 61 (255)
+.|.+|. +-||.|+.+.
T Consensus 2 ~~v~f~a-~wC~~C~~~~ 18 (77)
T 1ilo_A 2 MKIQIYG-TGCANCQMLE 18 (77)
T ss_dssp EEEEEEC-SSSSTTHHHH
T ss_pred cEEEEEc-CCChhHHHHH
Confidence 4566666 6999999874
No 144
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=23.78 E-value=78 Score=22.80 Aligned_cols=22 Identities=9% Similarity=0.089 Sum_probs=17.8
Q ss_pred CCCceEEEEEEEeCChhHHHHH
Q 043871 40 QDEKVNLSVYYESLSDTGAEFI 61 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi 61 (255)
...++-|-.||-+-||.|+.+.
T Consensus 31 ~~~k~vvv~f~a~~C~~C~~~~ 52 (121)
T 2j23_A 31 GGDKVVVIDFWATWCGPCKMIG 52 (121)
T ss_dssp SSSSCEEEEEECTTCSTHHHHH
T ss_pred cCCCEEEEEEECCCCHhHHHHH
Confidence 4566677788899999999885
No 145
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=23.73 E-value=50 Score=22.51 Aligned_cols=28 Identities=0% Similarity=0.103 Sum_probs=19.9
Q ss_pred CCceEEEEEEEeCChhHHHHHHHhhHHHH
Q 043871 41 DEKVNLSVYYESLSDTGAEFITHDLGKVF 69 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~ 69 (255)
..+.-|-.||-+-||.|+.+.. .|..+.
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~-~l~~~~ 45 (104)
T 2vim_A 18 KGRLIVVDFFAQWCGPCRNIAP-KVEALA 45 (104)
T ss_dssp TTSCEEEEEECTTCHHHHHHHH-HHHHHH
T ss_pred CCCeEEEEEECCCCHHHHHhhH-HHHHHH
Confidence 4566777888999999999853 344433
No 146
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=23.69 E-value=1.4e+02 Score=21.17 Aligned_cols=21 Identities=5% Similarity=0.031 Sum_probs=17.6
Q ss_pred CCceEEEEEEEeCChhHHHHH
Q 043871 41 DEKVNLSVYYESLSDTGAEFI 61 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi 61 (255)
.+++-|-.||-+-||.|+.+.
T Consensus 36 ~~~~~vv~f~a~wC~~C~~~~ 56 (124)
T 1faa_A 36 GDKPVVLDMFTQWCGPCKAMA 56 (124)
T ss_dssp TTSCEEEEEECTTCHHHHHHH
T ss_pred CCCEEEEEEECCcCHhHHHHh
Confidence 566778888899999999885
No 147
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=23.46 E-value=39 Score=27.00 Aligned_cols=21 Identities=14% Similarity=-0.001 Sum_probs=17.9
Q ss_pred CCceEEEEEEEeCChhHHHHH
Q 043871 41 DEKVNLSVYYESLSDTGAEFI 61 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi 61 (255)
..++.|-.|+.+=||+|+..+
T Consensus 53 ~~k~vvv~F~A~WC~pC~~~~ 73 (167)
T 1z6n_A 53 ERRYRLLVAGEMWCPDCQINL 73 (167)
T ss_dssp CSCEEEEEECCTTCHHHHHHH
T ss_pred CCCEEEEEEECCCChhHHHHH
Confidence 467888889999999999874
No 148
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=23.46 E-value=1.1e+02 Score=22.16 Aligned_cols=31 Identities=16% Similarity=0.258 Sum_probs=23.2
Q ss_pred CCceEEEEEEEeCChhHHHHHHHhhHHHHHhhc
Q 043871 41 DEKVNLSVYYESLSDTGAEFITHDLGKVFEKDL 73 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l 73 (255)
..|+-|-.||-+-||.|+..+. .|..+.+ ++
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~-~l~~l~~-~~ 62 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANA-ELKRLNK-EY 62 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHH-HHHHHHH-HT
T ss_pred CCcEEEEEEECCCCHHHHHHhH-HHHHHHH-Hh
Confidence 4677888888999999999864 4666555 45
No 149
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=23.43 E-value=53 Score=22.84 Aligned_cols=21 Identities=0% Similarity=-0.031 Sum_probs=17.6
Q ss_pred CCceEEEEEEEeCChhHHHHH
Q 043871 41 DEKVNLSVYYESLSDTGAEFI 61 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi 61 (255)
..+.-|-.||-+-||.|+.+.
T Consensus 20 ~~~~v~v~f~a~wC~~C~~~~ 40 (107)
T 1gh2_A 20 GSRLAVVKFTMRGCGPCLRIA 40 (107)
T ss_dssp TTSCEEEEEECSSCHHHHHHH
T ss_pred CCCEEEEEEECCCChhhHHHH
Confidence 466778889999999999874
No 150
>1yd0_A Uvrabc system protein C; DNA binding protein; 1.50A {Thermotoga maritima} PDB: 1ycz_A 1yd1_A 1yd4_A 1yd3_A 1yd2_A 1yd5_A
Probab=23.39 E-value=44 Score=24.85 Aligned_cols=57 Identities=19% Similarity=0.213 Sum_probs=33.2
Q ss_pred CCee--cCcchhcHHHHHHHhccCCCCCCC-------CC-CCcccccchhhHHHHHHHHHhhCccCCCC
Q 043871 196 NGDA--VGPDYGNFVKYVCEAYSGSHVPEA-------CK-EMPKSAKTSAAEKETAILLKQMRPKWNIG 254 (255)
Q Consensus 196 NG~~--~~~~~~nL~~~IC~~y~g~~~P~~-------C~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (255)
+|+. ++.+ .||++-|-+++.+. .+.. .. +.-....-..+.-.|+-++++.+|++|+-
T Consensus 24 ~g~vlYVGKA-knLr~Rv~syf~~~-~~k~~~~~~~~~~i~~~~t~sE~eAlllE~~lIk~~~P~yN~~ 90 (96)
T 1yd0_A 24 KGVPIYIGKA-KRLSNRLRSYLNPQ-TEKVFRIGEEADELETIVVMNEREAFILEANLIKKYRPKYNVR 90 (96)
T ss_dssp TTEEEEEEEE-SSHHHHHHGGGSCS-SHHHHHHHHHCSEEEEEECSSHHHHHHHHHHHHHHHCCTTCC-
T ss_pred CCeEEEEecC-cCHHHHHHHHccCC-CHHHHHHHHhccEEEEEEECCHHHHHHHHHHHHHHhCCCchhh
Confidence 6654 3444 79999999998862 1100 00 00001111223456888999999999983
No 151
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=23.14 E-value=32 Score=25.66 Aligned_cols=16 Identities=19% Similarity=0.017 Sum_probs=14.2
Q ss_pred EEEEEEeCChhHHHHH
Q 043871 46 LSVYYESLSDTGAEFI 61 (255)
Q Consensus 46 V~vYyESlCPd~~~Fi 61 (255)
|.||.-+.||+|++-.
T Consensus 2 i~iY~~~~C~~C~kak 17 (114)
T 1rw1_A 2 YVLYGIKACDTMKKAR 17 (114)
T ss_dssp EEEEECSSCHHHHHHH
T ss_pred EEEEECCCChHHHHHH
Confidence 7899999999998873
No 152
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=22.70 E-value=1e+02 Score=23.58 Aligned_cols=32 Identities=19% Similarity=0.166 Sum_probs=22.9
Q ss_pred CCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccC
Q 043871 41 DEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTS 75 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d 75 (255)
..|+-|-.|+-+-||.|+ .+ ..|..+++ ++.+
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~-~~l~~l~~-~~~~ 62 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QY-KELEALYK-RYKD 62 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HH-HHHHHHHH-HHGG
T ss_pred CCCEEEEEEEecCCCcch-hH-HHHHHHHH-Hhcc
Confidence 457777778899999999 54 45666665 3554
No 153
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=22.40 E-value=49 Score=23.21 Aligned_cols=21 Identities=10% Similarity=0.150 Sum_probs=15.5
Q ss_pred CCceEEEEEEEeCChhHHHHH
Q 043871 41 DEKVNLSVYYESLSDTGAEFI 61 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi 61 (255)
..++-|-.||-+-||.|+.+.
T Consensus 20 ~~~~~~v~f~a~wC~~C~~~~ 40 (112)
T 3d6i_A 20 GDKLIVLYFHTSWAEPCKALK 40 (112)
T ss_dssp TTCCEEEEEECCC--CHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHH
Confidence 356778889999999999974
No 154
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=22.03 E-value=57 Score=23.13 Aligned_cols=19 Identities=5% Similarity=0.076 Sum_probs=16.2
Q ss_pred CceEEEEEEEeCChhHHHH
Q 043871 42 EKVNLSVYYESLSDTGAEF 60 (255)
Q Consensus 42 ~kV~V~vYyESlCPd~~~F 60 (255)
.+..|-.||-+-||.|+.+
T Consensus 19 ~~~~vv~f~a~wC~~C~~~ 37 (110)
T 2l6c_A 19 LSDAIVFFHKNLCPHCKNM 37 (110)
T ss_dssp CSEEEEEEECSSCSTHHHH
T ss_pred CCCEEEEEECCCCHhHHHH
Confidence 4667888999999999987
No 155
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=21.44 E-value=55 Score=23.37 Aligned_cols=20 Identities=5% Similarity=-0.082 Sum_probs=16.3
Q ss_pred CceEEEEEEEeCChhHHHHH
Q 043871 42 EKVNLSVYYESLSDTGAEFI 61 (255)
Q Consensus 42 ~kV~V~vYyESlCPd~~~Fi 61 (255)
.+.-|-.||-+-||.|+.+.
T Consensus 29 ~~~~~v~f~a~wC~~C~~~~ 48 (118)
T 1zma_A 29 KETATFFIGRKTCPYCRKFA 48 (118)
T ss_dssp TCCEEEEEECTTCHHHHHHH
T ss_pred CCeEEEEEECCCCccHHHHH
Confidence 45567788999999999884
No 156
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=20.59 E-value=1.5e+02 Score=22.69 Aligned_cols=22 Identities=9% Similarity=0.172 Sum_probs=17.6
Q ss_pred CCCceEEEEEEEeCChhHHHHH
Q 043871 40 QDEKVNLSVYYESLSDTGAEFI 61 (255)
Q Consensus 40 ~~~kV~V~vYyESlCPd~~~Fi 61 (255)
..+++-|-.||-+-||.|+.+.
T Consensus 62 ~~~~~vlv~F~a~wC~~C~~~~ 83 (155)
T 2ppt_A 62 RDDLPLLVDFWAPWCGPCRQMA 83 (155)
T ss_dssp TCSSCEEEEEECTTCHHHHHHH
T ss_pred hCCCcEEEEEECCCCHHHHHHH
Confidence 3466677788899999999985
No 157
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=20.56 E-value=1.4e+02 Score=23.30 Aligned_cols=40 Identities=13% Similarity=0.076 Sum_probs=26.4
Q ss_pred CCceEEEEEEEeCChhHHHHHHHhhHHHHHhhccCceEEEEEe
Q 043871 41 DEKVNLSVYYESLSDTGAEFITHDLGKVFEKDLTSIVNLRLIP 83 (255)
Q Consensus 41 ~~kV~V~vYyESlCPd~~~Fi~~qL~P~~~~~l~d~vdl~lVP 83 (255)
..|+-|-.|+-+-||.|+.-+ .+|..+++ ++.+. ++++|-
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~-~~l~~l~~-~~~~~-~v~vv~ 87 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNY-TQLVDLHA-RYAEC-GLRILA 87 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHH-HHHHHHHH-HHGGG-TEEEEE
T ss_pred CCCEEEEEEecCCCCchHHHH-HHHHHHHH-HhhcC-CeEEEE
Confidence 457778888889999999875 34666655 35442 344443
No 158
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.11 E-value=47 Score=25.07 Aligned_cols=16 Identities=0% Similarity=-0.020 Sum_probs=13.6
Q ss_pred EEEEEEEeCChhHHHH
Q 043871 45 NLSVYYESLSDTGAEF 60 (255)
Q Consensus 45 ~V~vYyESlCPd~~~F 60 (255)
.|.||+-.-||+|++.
T Consensus 28 ~vvvf~~~~Cp~C~~~ 43 (130)
T 2cq9_A 28 CVVIFSKTSCSYCTMA 43 (130)
T ss_dssp SEEEEECSSCSHHHHH
T ss_pred cEEEEEcCCChHHHHH
Confidence 4677999999999875
Done!