BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 043880
         (355 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q93XX5|Y5713_ARATH PI-PLC X domain-containing protein At5g67130 OS=Arabidopsis
           thaliana GN=At5g67130 PE=1 SV=1
          Length = 426

 Score =  398 bits (1022), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 185/333 (55%), Positives = 236/333 (70%), Gaps = 2/333 (0%)

Query: 23  ACSNGQRKLLEQCSSDGDCEAGLYCFSCPE-RFSGSRCVRSTITDQFKLLNNSLPLNKYA 81
           ACSNG  +LL+ CSS  DC +GLYC  CP    S   C R   T    ++N  LP NKY 
Sbjct: 28  ACSNGNCQLLDSCSSATDCVSGLYCGDCPAVGRSKPVCTRGQATSPTSIIN-GLPFNKYT 86

Query: 82  FLTTHNAFAIDHTPSHTGVPRLTFTNQEDNVTQQLKNGVRGLMLDTYDFKGDVWLCHSFG 141
           +L THNAF+  + P   GV R+TF NQED +T QL+NGVRGLMLD YDF  D+WLCHS  
Sbjct: 87  WLMTHNAFSNANAPLLPGVERITFYNQEDTITNQLQNGVRGLMLDMYDFNNDIWLCHSLR 146

Query: 142 GKCHDYTAFEPAIDTLKEIEAFMSSKPAEIVTLILEDYVQAPNGLTKVFAEAGLMKYWFP 201
           G+C ++TAF+PAI+ L+E+EAF+S  P EIVT+I+EDYV  P GL+ +FA AGL KYWFP
Sbjct: 147 GQCFNFTAFQPAINILREVEAFLSQNPTEIVTIIIEDYVHRPKGLSTLFANAGLDKYWFP 206

Query: 202 VSKMPRNGEDWPLVSDMVANNQRLLVFTSNKSKQESEGIAYQWSYMVENKYGNRGMHAGS 261
           VSKMPR GEDWP V+DMV  N RLLVFTS  +K++ EG+AYQW YMVEN+ G+ G+  GS
Sbjct: 207 VSKMPRKGEDWPTVTDMVQENHRLLVFTSVAAKEDEEGVAYQWRYMVENESGDPGVKRGS 266

Query: 262 CSNRAESSPLNDERKSLVLVNYFKSLPIKRTACVHNSGHLINMLHTCYAAAGNRWANFVA 321
           C NR ES PLN +  SL L+NYF + P+++ AC  +S  L  M+ TC  + GNR  NF+A
Sbjct: 267 CPNRKESQPLNSKSSSLFLMNYFPTYPVEKDACKEHSAPLAEMVGTCLKSGGNRMPNFLA 326

Query: 322 VDYYKRSEGRGSFQAVDTLNGRLLCGCDDVHAC 354
           V++Y RS+G G F+ +D +NG +LCGC+ + AC
Sbjct: 327 VNFYMRSDGGGVFEILDRMNGPVLCGCETLSAC 359


>sp|Q10683|Y2075_MYCTU Uncharacterized protein Rv2075c/MT2135 OS=Mycobacterium
           tuberculosis GN=Rv2075c PE=4 SV=1
          Length = 487

 Score = 38.9 bits (89), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 20/135 (14%)

Query: 71  LNNSLPLNKYAFLTTHNAF---AIDHTPSHTGVPRLTFTNQEDNVTQQLKNGVRGLMLDT 127
           L + +PL +  +L THN+F   +   T SH        +NQ+ ++ QQL   VR L LD 
Sbjct: 108 LQDPVPLRETQWLGTHNSFNSLSDSFTVSHAD------SNQQLSLAQQLDIDVRALELDL 161

Query: 128 YDFK-------GDVWLCHSFGGKCHDYT-AFEPAIDT-LKEIEAFMSSK--PAEIVTLIL 176
           +            V +CH  G K  +     EP + T L +I  ++++     E++ L L
Sbjct: 162 HYLPRLEGHGAPGVTVCHGLGPKNANLGCTVEPLLATVLPQIANWLNAPGHTEEVILLYL 221

Query: 177 EDYVQAPNGLTKVFA 191
           ED ++  +    V A
Sbjct: 222 EDQLKNASAYESVVA 236


>sp|A6NHC0|CAN8_HUMAN Calpain-8 OS=Homo sapiens GN=CAPN8 PE=2 SV=3
          Length = 703

 Score = 32.3 bits (72), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)

Query: 202 VSKMPRNGEDWPLVSDMVANNQRLLVFTSNKSKQESEGIAYQWSYMVENKYGNRGMHAGS 261
           + K   +GE W  +SD V    RL +   +     SE + ++W+ ++ N +  RG  AG 
Sbjct: 315 LDKKVEDGEFWMSLSDFVRQFSRLEICNLSPDSLSSEEV-HKWNLVLFNGHWTRGSTAGG 373

Query: 262 CSN 264
           C N
Sbjct: 374 CQN 376


>sp|P53197|CDH1_YEAST APC/C activator protein CDH1 OS=Saccharomyces cerevisiae (strain
           ATCC 204508 / S288c) GN=CDH1 PE=1 SV=1
          Length = 566

 Score = 32.0 bits (71), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 94  TPSHTGV-PRLTFTNQEDNVTQQLKNGVRGLMLDTY 128
           +P  T V PR  FT+Q+D +T+   N VRG  L TY
Sbjct: 169 SPHSTPVTPRRLFTSQQDEITRPSSNSVRGASLLTY 204


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.320    0.134    0.417 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 133,388,492
Number of Sequences: 539616
Number of extensions: 5515898
Number of successful extensions: 10774
Number of sequences better than 100.0: 8
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 10769
Number of HSP's gapped (non-prelim): 9
length of query: 355
length of database: 191,569,459
effective HSP length: 118
effective length of query: 237
effective length of database: 127,894,771
effective search space: 30311060727
effective search space used: 30311060727
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)