Query 043880
Match_columns 355
No_of_seqs 245 out of 707
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 15:49:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043880.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043880hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2plc_A PI-PLC, phosphatidylino 100.0 9.8E-37 3.4E-41 290.2 10.9 251 64-342 3-273 (274)
2 3ea1_A 1-phosphatidylinositol 100.0 1.2E-32 4.1E-37 264.2 12.4 262 56-345 3-296 (298)
3 3v1h_A 1-phosphatidylinositol 100.0 6.4E-31 2.2E-35 253.4 15.9 255 61-343 3-301 (306)
4 3h4x_A Phosphatidylinositol-sp 99.8 2.2E-18 7.5E-23 165.2 12.1 139 73-230 24-195 (339)
5 2zkm_X 1-phosphatidylinositol- 97.8 8.1E-05 2.8E-09 80.0 12.2 140 73-229 314-462 (799)
6 1djx_A PLC-D1, phosphoinositid 97.8 5.5E-05 1.9E-09 79.2 9.5 139 73-229 166-307 (624)
7 3ohm_B 1-phosphatidylinositol- 97.5 0.00032 1.1E-08 76.0 11.0 140 73-229 318-466 (885)
8 3qr0_A Phospholipase C-beta (P 97.5 0.00064 2.2E-08 73.2 12.3 142 72-230 324-471 (816)
9 3rlg_A Sphingomyelin phosphodi 75.7 4.4 0.00015 38.5 6.2 67 109-177 39-114 (302)
10 3no3_A Glycerophosphodiester p 63.8 9.8 0.00034 34.1 5.6 73 106-179 21-107 (238)
11 1xx1_A Smase I, sphingomyelina 60.9 16 0.00054 33.3 6.5 69 110-179 18-95 (285)
12 3ks6_A Glycerophosphoryl diest 59.8 44 0.0015 29.9 9.3 35 106-140 17-52 (250)
13 1h59_B Insulin-like growth fac 54.2 4.6 0.00016 28.6 1.2 22 28-49 2-24 (54)
14 2jtk_A Dickkopf-related protei 47.6 8.7 0.0003 30.0 2.0 21 28-48 7-27 (90)
15 3zxw_B Ribulose bisphosphate c 45.9 25 0.00085 28.7 4.6 32 146-178 60-91 (118)
16 1rbl_M Ribulose 1,5 bisphospha 45.7 26 0.00087 28.3 4.6 32 146-178 61-92 (109)
17 1svd_M Ribulose bisphosphate c 45.6 25 0.00085 28.4 4.5 32 146-178 63-94 (110)
18 1bwv_S Rubisco, protein (ribul 41.2 31 0.0011 28.9 4.6 32 146-178 55-86 (138)
19 1bxn_I Rubisco, protein (ribul 40.5 31 0.0011 28.9 4.5 32 146-178 55-86 (139)
20 2pz0_A Glycerophosphoryl diest 38.3 16 0.00055 32.8 2.6 37 104-140 24-61 (252)
21 2dt7_A Splicing factor 3A subu 36.5 12 0.0004 24.5 1.0 22 150-171 12-33 (38)
22 4f0h_B Ribulose bisphosphate c 36.1 41 0.0014 28.2 4.5 32 146-178 55-86 (138)
23 1imt_A MIT1, intestinal toxin 34.1 8.5 0.00029 29.3 0.0 17 31-47 3-19 (80)
24 1wdd_S Ribulose bisphosphate c 33.9 48 0.0017 27.4 4.5 28 151-178 77-104 (128)
25 2kra_A Prokineticin BV8; beta 33.5 16 0.00054 27.5 1.4 18 31-48 3-20 (77)
26 1gk8_I Ribulose bisphosphate c 32.7 51 0.0017 27.7 4.5 28 151-178 84-111 (140)
27 2o55_A Putative glycerophospho 31.5 34 0.0011 30.7 3.6 35 106-140 23-58 (258)
28 2otd_A Glycerophosphodiester p 31.0 47 0.0016 29.4 4.5 36 105-140 20-56 (247)
29 1zcc_A Glycerophosphodiester p 30.9 47 0.0016 29.6 4.5 36 105-140 15-51 (248)
30 1o1z_A GDPD, glycerophosphodie 30.6 43 0.0015 29.6 4.1 37 104-140 25-62 (234)
31 1vd6_A Glycerophosphoryl diest 30.2 44 0.0015 29.2 4.1 36 105-140 21-57 (224)
32 3qvq_A Phosphodiesterase OLEI0 28.8 49 0.0017 29.6 4.2 35 106-140 24-59 (252)
33 3ch0_A Glycerophosphodiester p 28.5 50 0.0017 29.7 4.2 36 105-140 22-58 (272)
34 4cpa_I Metallocarboxypeptidase 28.2 27 0.00092 22.4 1.6 20 32-51 9-28 (38)
35 3s2k_C Dickkopf-related protei 26.9 16 0.00053 28.9 0.4 20 28-47 8-27 (97)
36 1lpb_A Colipase; hydrolase(car 24.9 31 0.0011 27.1 1.8 17 28-44 10-26 (95)
37 1t6t_1 Putative protein; struc 24.5 1E+02 0.0036 24.9 5.0 67 150-232 5-72 (118)
38 2k7r_A Primosomal protein DNAI 23.5 26 0.00089 27.6 1.1 14 158-171 32-45 (106)
39 2ygo_A WIF-1, WNT inhibitory f 23.3 29 0.00098 30.6 1.4 29 33-62 153-181 (188)
40 3mz2_A Glycerophosphoryl diest 20.4 59 0.002 30.0 3.1 35 106-140 47-82 (292)
41 3m91_B Prokaryotic ubiquitin-l 20.4 61 0.0021 21.8 2.2 26 152-177 15-40 (44)
No 1
>2plc_A PI-PLC, phosphatidylinositol-specific phospholipase C; hydrolase, phospholipid degradation, virulence factor of human pathogen; 2.00A {Listeria monocytogenes} SCOP: c.1.18.2 PDB: 1aod_A*
Probab=100.00 E-value=9.8e-37 Score=290.24 Aligned_cols=251 Identities=14% Similarity=0.227 Sum_probs=166.7
Q ss_pred ccccccccCCCcccccccccccCccCcCCCCCCCCCCCcccccCCcccHHHHHhcCccEEEeEEEeeCCcEEEEecCCCC
Q 043880 64 ITDQFKLLNNSLPLNKYAFLTTHNAFAIDHTPSHTGVPRLTFTNQEDNVTQQLKNGVRGLMLDTYDFKGDVWLCHSFGGK 143 (355)
Q Consensus 64 ~~~~~~~~~~~lpln~ltipGTHNS~a~~~~~~~~g~~~~~~~nQ~~sIt~QL~~GVR~LdLdv~~~~~~l~lcH~~~~~ 143 (355)
..++|+.+.+++||++++||||||||++..... ......++.||+.+|++||++|||+||||++ +++++||+.
T Consensus 3 ~~~WM~~l~~~~~l~~l~ipGtHdS~~~~~~~~-~~~~~~~~~~Q~~~i~~QL~~GvR~ldlr~~---~~~~~~H~~--- 75 (274)
T 2plc_A 3 TKQWMSALPDTTNLAALSIPGTHDTMSYNGDIT-WTLTKPLAQTQTMSLYQQLEAGIRYIDIRAK---DNLNIYHGP--- 75 (274)
T ss_dssp GGGTGGGSCTTCBGGGSEEEEETTTTTTSCSHH-HHHTHHHHCCCSSCHHHHHHTTCCEEEEEEC---TTSEEEETT---
T ss_pred hhhHhhcCCCCCeeeeeeeeeecchhhccCCCc-cccccccccCCCcCHHHHHHhCCcEEEEEEC---CcEEEEEcC---
Confidence 456899999999999999999999998864310 0001136899999999999999999999999 889999996
Q ss_pred CccCCCCccHHHHHHHHHHHHhcCCCcEEEEEeecccCCchhh----HHHHHHhCcccccccCCCCCCCCCCCCcHHHHH
Q 043880 144 CHDYTAFEPAIDTLKEIEAFMSSKPAEIVTLILEDYVQAPNGL----TKVFAEAGLMKYWFPVSKMPRNGEDWPLVSDMV 219 (355)
Q Consensus 144 C~~~~~~~~l~d~L~eI~~FL~~nP~EVV~l~l~d~~~~~~~l----~~~f~~~gl~~~~~~p~~~~~~~~~wPTL~emi 219 (355)
|. . ..+++++|+||++||++||+|||+|.+++.......+ +.++ .++.+|+|+|+.. ....+||||+||
T Consensus 76 ~~--~-~~~~~~~L~~i~~fL~~~P~EvVil~~~~~~~~~~~~~~~~~~l~--~~l~~~~~~~~~~-~~~~~~pTL~e~- 148 (274)
T 2plc_A 76 IF--L-NASLSGVLETITQFLKKNPKETIIMRLKDEQNSNDSFDYRIQPLI--NIYKDYFYTTPRT-DTSNKIPTLKDV- 148 (274)
T ss_dssp EE--E-EEEHHHHHHHHHHHHHHSTTCCEEEEEEETTCSCSHHHHHHHHHH--HHTGGGBCEEESS-CCCCCCCBTTTT-
T ss_pred CC--C-CCCHHHHHHHHHHHHHhCCCceEEEEEEeCCCCCCcHHHHHHHHH--HHhhceeecCccc-ccCCCCCCHHHh-
Confidence 42 2 2799999999999999999999999999743222222 2333 4678999987654 235789999999
Q ss_pred hcCcEEEEEEcCCCcc-ccC--CCcccc---cceeeccCCCCCC-CccC---Cc-cCCCCCCCCccccceeEeeecCC--
Q 043880 220 ANNQRLLVFTSNKSKQ-ESE--GIAYQW---SYMVENKYGNRGM-HAGS---CS-NRAESSPLNDERKSLVLVNYFKS-- 286 (355)
Q Consensus 220 ~~gkRlvvf~~~~~~~-~~~--gi~y~~---~~~~En~y~~~~~-~~~s---C~-~R~~s~~l~~~~~~L~l~NhF~~-- 286 (355)
+||||||+....... .++ .+.+.| ...+++.|...+. .++. +. .+... ....+.+||.-.
T Consensus 149 -rGK~vlv~~~~~~~~~~~~~~~~~~~w~~~~~~iqD~y~~~~~~~K~~~i~~~l~~a~~------~~~~~~iN~~S~~~ 221 (274)
T 2plc_A 149 -RGKILLLSENHTKKPLVINSRKFGMQFGAPNQVIQDDYNGPSVKTKFKEIVQTAYQASK------ADNKLFLNHISATS 221 (274)
T ss_dssp -TTCEEEEEESTTCSCEEETTEEESEETTCTTEEEECCCBSCCHHHHHHHHHHHHHHHHH------CSSSEEEEECCCBC
T ss_pred -CCCEEEEEeCCCCCCCCcCcccccccCCCCCccccccCCCCcHHHHHHHHHHHHHHhhc------CCCCeEEEEEcccC
Confidence 699999997643210 001 112223 1224555533221 1111 11 11110 112346677543
Q ss_pred ---CcchhhhcccCchhHHHHHhHhhhhcCCCcccEEEEeccCCCCCCCHHHHHHHHhc
Q 043880 287 ---LPIKRTACVHNSGHLINMLHTCYAAAGNRWANFVAVDYYKRSEGRGSFQAVDTLNG 342 (355)
Q Consensus 287 ---~P~~~~a~~~Ns~~L~~~~~~C~~~~g~r~pNfIaVDF~~~~~~G~~~~av~~lN~ 342 (355)
.| +..|...|.. +...+..+.... .+.+|+|++||++ ++.+++|+++|.
T Consensus 222 ~~~~p-~~~A~~~n~~-l~~~l~~~~~~~-~~~~gIV~~DFv~----~~~i~~vI~~N~ 273 (274)
T 2plc_A 222 LTFTP-RQYAAALNNK-VEQFVLNLTSEK-VRGLGILIMDFPE----KQTIKNIIKNNK 273 (274)
T ss_dssp SSSCH-HHHHHHHHHH-HHHHHHHHHHTT-CCCCEEEEESSCC----HHHHHHHHTTSC
T ss_pred CCCCH-HHHHHHHhHH-HHHHHHHHhcCC-CCcccEEEEeCCC----chhHHHHHhccC
Confidence 23 2234444422 334444454444 3459999999997 578999999996
No 2
>3ea1_A 1-phosphatidylinositol phosphodiesterase; phosphatidylinositol-specific phospholipase C, PI-PLC, dimer, interfacially impaired; 1.75A {Bacillus thuringiensis} SCOP: c.1.18.2 PDB: 3ea2_A* 3ea3_A 1t6m_A 2or2_A 1gym_A* 1ptd_A 1ptg_A* 7ptd_A 2ptd_A 4ptd_A 3ptd_A 6ptd_A 5ptd_A
Probab=99.98 E-value=1.2e-32 Score=264.19 Aligned_cols=262 Identities=15% Similarity=0.214 Sum_probs=168.0
Q ss_pred CCceecccccccccccCCCcccccccccccCccCcCCCCCCCCCCCcccccCCcccHHHHHhcCccEEEeEEEeeC-CcE
Q 043880 56 GSRCVRSTITDQFKLLNNSLPLNKYAFLTTHNAFAIDHTPSHTGVPRLTFTNQEDNVTQQLKNGVRGLMLDTYDFK-GDV 134 (355)
Q Consensus 56 ~~~c~r~~~~~~~~~~~~~lpln~ltipGTHNS~a~~~~~~~~g~~~~~~~nQ~~sIt~QL~~GVR~LdLdv~~~~-~~l 134 (355)
...|....+ ++|+.+.+++||++|+|||||||+++..... ....++.||+.+|++||++|||+||||++..+ +++
T Consensus 3 ~~~~~~~~~-~WM~~l~d~~pl~~lsiPGTHdS~a~~~~~~---~~~~~~~tQ~~si~~QL~~GIR~lDlRv~~~~~~~l 78 (298)
T 3ea1_A 3 SVNELENWS-KWMQPIPDNIPLARISIPGTHDSGTFKLQNP---IKQVWGMTQEYDFRYQMDHGARIFDIRGRLTDDNTI 78 (298)
T ss_dssp CGGGGGCTT-STTTTSCTTSBTTTSCEEEETTTTCTTCCSH---HHHHHHCCCSSCHHHHHHTTCCEEEEEEEECTTSCE
T ss_pred chhhhhcHH-HHHHhCccCCeeeeeeeccccccccccCCCc---hhhhcccCccccHHHHHhcCCeEEEEEeEecCCCcE
Confidence 345776664 5699999999999999999999999864320 00136789999999999999999999999874 689
Q ss_pred EEEecCCCCCccCCCCccHHHHHHHHHHHHhcCCCcEEEEEeecccC----CchhhHHHHHHhCcccccccCCCCCCCCC
Q 043880 135 WLCHSFGGKCHDYTAFEPAIDTLKEIEAFMSSKPAEIVTLILEDYVQ----APNGLTKVFAEAGLMKYWFPVSKMPRNGE 210 (355)
Q Consensus 135 ~lcH~~~~~C~~~~~~~~l~d~L~eI~~FL~~nP~EVV~l~l~d~~~----~~~~l~~~f~~~gl~~~~~~p~~~~~~~~ 210 (355)
++||+. |.+ ..++.++|+||++||++||+|||+|+|++... ....|...+.. +|...|... ...
T Consensus 79 ~~~Hg~---~~~---~~~l~dvL~ei~~FL~~hP~EvVil~ik~e~~~~~~~~~~f~~~~~~----~~~~~~~~~--~~~ 146 (298)
T 3ea1_A 79 VLHHGP---LYL---YVTLHEFINEAKQFLKDNPSETIIMSLKKEYEDMKGAEGSFSSTFEK----NYFVDPIFL--KTE 146 (298)
T ss_dssp EEEETT---EEE---EEEHHHHHHHHHHHHHHCTTCCEEEEEEECSCCCTTCSSCHHHHHHH----HTTTSTTBC--CCC
T ss_pred EEECCc---ccc---cCCHHHHHHHHHHHHHHCCCeEEEEEEEecCCCcCcchHHHHHHHHH----HHhcCcccc--cCC
Confidence 999996 553 27899999999999999999999999996321 13355555543 222222211 146
Q ss_pred CCCcHHHHHhcCcEEEEEEcCCCccccCCCc-cccc--------------ceeeccCCCCCCCccC----CccCCCCCCC
Q 043880 211 DWPLVSDMVANNQRLLVFTSNKSKQESEGIA-YQWS--------------YMVENKYGNRGMHAGS----CSNRAESSPL 271 (355)
Q Consensus 211 ~wPTL~emi~~gkRlvvf~~~~~~~~~~gi~-y~~~--------------~~~En~y~~~~~~~~s----C~~R~~s~~l 271 (355)
.||||+|+| || ||+|.+...+....|+. ..|. ..+++.|......+|. +-.|....+
T Consensus 147 ~~ptLge~R--GK-ivll~rf~~~~~~~g~~~~~W~dn~~f~~~~~~~~~~~vQD~y~v~~~~K~~~I~~~l~~a~~~~- 222 (298)
T 3ea1_A 147 GNIKLGDAR--GK-IVLLKRYSGSNESGGYNNFYWPDNETFTTTVNQNVNVTVQDKYKVNYDEKVKSIKDTMDETMNNS- 222 (298)
T ss_dssp SSCBHHHHT--TS-EEEEEESSCCCSCCSBCCCCCCTTSEEEEECSSSCEEEEECCTTSCHHHHHHHHHHHHHHHHTTT-
T ss_pred CCCcHHHhc--CC-EEEEEecCCcccCCCcCcccCCCccccccccCCCccEEeCceeecCcHHHHHHHHHHHHHhhccc-
Confidence 799999996 55 77777765443222332 2341 2445555442211221 111211100
Q ss_pred CccccceeEeeecCC--------CcchhhhcccCchhHHHHHhHhhhhcCCCcccEEEEeccCCCCCCCHHHHHHHHhcc
Q 043880 272 NDERKSLVLVNYFKS--------LPIKRTACVHNSGHLINMLHTCYAAAGNRWANFVAVDYYKRSEGRGSFQAVDTLNGR 343 (355)
Q Consensus 272 ~~~~~~L~l~NhF~~--------~P~~~~a~~~Ns~~L~~~~~~C~~~~g~r~pNfIaVDF~~~~~~G~~~~av~~lN~~ 343 (355)
....+ +.+||.-. .| ...|.+.|-. +.... |.... +...+|..||++...+.+..+.+++.|..
T Consensus 223 -~~~~~-~yinf~S~s~g~~~~~~P-~~~A~~iNp~-~~~~l--~~~~~--~~~Giv~~DF~~~~~~~~l~~~li~~n~~ 294 (298)
T 3ea1_A 223 -EDLNH-LYINFTSLSSGGTAWNSP-YSYASSINPE-IANDI--KQKNP--TRVGWVIQDYINEKWSPLLYQEVIRANKS 294 (298)
T ss_dssp -TCTTE-EEEEECCCCCCSSGGGSH-HHHHHHHHHH-HHHHH--HHHCC--SCCCEEEESCCSSSSSSCHHHHHHHTTGG
T ss_pred -ccCCc-EEEEEEcccCCCcccCCH-HHHHHhhCHH-HHHHH--HhcCC--CceeEEEEecCCCccchHHHHHHHHhhHH
Confidence 01224 34566322 24 2344444421 22222 22222 34889999999864456899999999987
Q ss_pred cc
Q 043880 344 LL 345 (355)
Q Consensus 344 ~~ 345 (355)
|+
T Consensus 295 ~~ 296 (298)
T 3ea1_A 295 LI 296 (298)
T ss_dssp GC
T ss_pred hh
Confidence 75
No 3
>3v1h_A 1-phosphatidylinositol phosphodiesterase; PI-cation, TIM barrel, phospholipase, lyase; HET: INS; 1.90A {Staphylococcus aureus subsp} PDB: 4f2b_A* 4f2u_A* 4f2t_A 3v18_A 3v16_A*
Probab=99.97 E-value=6.4e-31 Score=253.40 Aligned_cols=255 Identities=12% Similarity=0.185 Sum_probs=166.7
Q ss_pred cccccccccccCCCcccccccccccCccCcCCCCCCCCCCCcccccCCcccHHHHHhcCccEEEeEEEee-CCcEEEEec
Q 043880 61 RSTITDQFKLLNNSLPLNKYAFLTTHNAFAIDHTPSHTGVPRLTFTNQEDNVTQQLKNGVRGLMLDTYDF-KGDVWLCHS 139 (355)
Q Consensus 61 r~~~~~~~~~~~~~lpln~ltipGTHNS~a~~~~~~~~g~~~~~~~nQ~~sIt~QL~~GVR~LdLdv~~~-~~~l~lcH~ 139 (355)
|-.+.++|+.+++++||++|+|||||||+++..... .. ..++.||+.+|++||++|||+||||++.. ++.+++||+
T Consensus 3 ~~~~~~WM~~l~d~~~l~~lsiPGTHdS~~~~~~~p-~~--~~~~~tQ~~si~~QL~~GVR~lDlRv~~~~~~~l~~~Hg 79 (306)
T 3v1h_A 3 SKSPENWMSKLDDGKHLTEINIPGSHDSGSFTLKDP-VK--SVWAKTQDKDYLTQMKSGVRFFDIRGRASADNMISVHHG 79 (306)
T ss_dssp GGSGGGSGGGSCTTSBGGGSCEEEETTGGGGGCCCH-HH--HHHHCCCSSCHHHHHHTTCCEEEEEEEEEETTEEEEEET
T ss_pred CCChhhHHhcCCCCCEeecceeccccchhhccCCCc-cc--chhhccCCCCHHHHHHhCcceEEEEeeecCCCcEEEEcc
Confidence 445778999999999999999999999999864321 00 13589999999999999999999999865 678999999
Q ss_pred CCCCCccCCCCccHHHHHHHHHHHHhcCCCcEEEEEeecccCC----chhhHHHHHHh-----CcccccccCCCCCCCCC
Q 043880 140 FGGKCHDYTAFEPAIDTLKEIEAFMSSKPAEIVTLILEDYVQA----PNGLTKVFAEA-----GLMKYWFPVSKMPRNGE 210 (355)
Q Consensus 140 ~~~~C~~~~~~~~l~d~L~eI~~FL~~nP~EVV~l~l~d~~~~----~~~l~~~f~~~-----gl~~~~~~p~~~~~~~~ 210 (355)
. |++ ..++.++|+||++||++||+|||||+|+++... ...|.++|.+. +..++||.. ..
T Consensus 80 ~---~~~---~~~l~dvL~~i~~FL~~hP~EvVil~l~~e~~~~~~~~~~f~~~~~~~~~~~~~~~~~~y~~------~~ 147 (306)
T 3v1h_A 80 M---VYL---HHELGKFLDDAKYYLSAYPNETIVMSMKKDYDSDSKVTKTFEEIFREYYYNNPQYQNLFYTG------SN 147 (306)
T ss_dssp T---EEE---EEEHHHHHHHHHHHHHHSTTCCEEEEEEECSCCCTTCCSCHHHHHHHHTTTCGGGTTTBCCC------SC
T ss_pred C---ccc---CCcHHHHHHHHHHHHHHCCCeEEEEEEEeCCCCCccchHHHHHHHHHHhhcCcccccceecC------CC
Confidence 6 543 279999999999999999999999999976422 34677777652 223445532 24
Q ss_pred CCCcHHHHHhcCcEEEEEEcCCCccccCCCc-----cccc---------------ceeeccCCCCCCCccCCc----cCC
Q 043880 211 DWPLVSDMVANNQRLLVFTSNKSKQESEGIA-----YQWS---------------YMVENKYGNRGMHAGSCS----NRA 266 (355)
Q Consensus 211 ~wPTL~emi~~gkRlvvf~~~~~~~~~~gi~-----y~~~---------------~~~En~y~~~~~~~~sC~----~R~ 266 (355)
.+|||+|+| || ||+|.+........|+. ..|. ..+++.|......+|... .|.
T Consensus 148 ~~PtLge~R--GK-Ivll~rf~~~~~~~g~~~~~~g~~W~dn~~f~~~~~~~~~~~~iQD~y~~~~~~K~~~i~~~l~~a 224 (306)
T 3v1h_A 148 ANPTLKETK--GK-IVLFNRMGGTYIKSGYGADTSGIQWADNATFETKINNGSLNLKVQDEYKDYYDKKVEAVKNLLAKA 224 (306)
T ss_dssp SSCBHHHHT--TS-EEEEEESSSCSCCSSBTCSTTCCCCCTTEEEEEEETTTTEEEEEEECTTCCHHHHHHHHHHHHHHH
T ss_pred CCCchHHhc--Cc-EEEEEecCCccccCCccccccCCCCCCCcccceeccCCCceEEeCcccccChHHHHHHHHHHHHHH
Confidence 699999997 55 66666665432211211 1231 245555554321222211 122
Q ss_pred CCCCCCccccceeEeeecCC--------CcchhhhcccCchhHHHHHhHhhhhcCCCcccEEEEeccCC--CCCCCHHHH
Q 043880 267 ESSPLNDERKSLVLVNYFKS--------LPIKRTACVHNSGHLINMLHTCYAAAGNRWANFVAVDYYKR--SEGRGSFQA 336 (355)
Q Consensus 267 ~s~~l~~~~~~L~l~NhF~~--------~P~~~~a~~~Ns~~L~~~~~~C~~~~g~r~pNfIaVDF~~~--~~~G~~~~a 336 (355)
... ....+||+ ||.-. .|. ..|...|.. +.... |.. .. +..-+|+.||++. +++++..+.
T Consensus 225 ~~~---~~~~~l~i-Nf~Sas~g~~~~~~P~-~~A~~iNp~-~~~~L--~~~-~~-~~~GIv~~Df~~~~w~~~~~Lv~~ 294 (306)
T 3v1h_A 225 KTD---SNKDNVYV-NFLSVASGGSAFNSTY-NYASYINPE-IAKTI--KAN-GK-ARTGWLIVDYAGYTWPGYDDIVSE 294 (306)
T ss_dssp HTC---CCTTEEEE-EECCCCCCSSSCCCHH-HHHHHHHHH-HHHHH--HHT-CS-CCCCEEEESSTTCCCTTSCCHHHH
T ss_pred HhC---cCCCeEEE-EEEcccCCCccccCHH-HHHHHHCHH-HHHHH--Hhc-CC-CceEEEEEeCCCCCccchHHHHHH
Confidence 111 11345655 77532 243 233333321 11111 222 22 3488999999985 334689999
Q ss_pred HHHHhcc
Q 043880 337 VDTLNGR 343 (355)
Q Consensus 337 v~~lN~~ 343 (355)
++..|..
T Consensus 295 iI~~N~~ 301 (306)
T 3v1h_A 295 IIDSNKL 301 (306)
T ss_dssp HHHHSCC
T ss_pred HHHhCcc
Confidence 9999963
No 4
>3h4x_A Phosphatidylinositol-specific phospholipase C1; PI-PLC, Ca2+-dependent, catalytic TIM barrel, disulfide-LINK loop, hydrolase; 1.23A {Streptomyces antibioticus} PDB: 3h4w_A
Probab=99.76 E-value=2.2e-18 Score=165.25 Aligned_cols=139 Identities=16% Similarity=0.259 Sum_probs=100.9
Q ss_pred CCcccccccccccCccCcCCCCCCCCCCCcccccCCcccHHHHHhcCccEEEeEEEee--CCcEEEEecCC----CCCcc
Q 043880 73 NSLPLNKYAFLTTHNAFAIDHTPSHTGVPRLTFTNQEDNVTQQLKNGVRGLMLDTYDF--KGDVWLCHSFG----GKCHD 146 (355)
Q Consensus 73 ~~lpln~ltipGTHNS~a~~~~~~~~g~~~~~~~nQ~~sIt~QL~~GVR~LdLdv~~~--~~~l~lcH~~~----~~C~~ 146 (355)
.+.||++++++|+||||.... ..+|++||+.|||.||||+|.. .+++.+||+.. ..|..
T Consensus 24 ~~~pls~~T~~g~HNSY~~g~---------------~~~i~~qLd~GVR~LELDIw~n~~~g~~~V~Hg~~l~~~nnC~~ 88 (339)
T 3h4x_A 24 AATTYGTSTSVGVHNAYEKEK---------------YRYFADALDSGAALLELDLWSNALGRSWRVSHSNPLGNNSNCEG 88 (339)
T ss_dssp -CCBTTSEEEEEETTTTCTTT---------------CSSHHHHHTTCCSEEEEEEESSSSSSSCEECSSSCSSCCSSCCC
T ss_pred ccCccccceEeeccccccccC---------------cccHHHHHHhCCCEEEEEeecCCCCCCeEEeCCCcccccccccc
Confidence 479999999999999997532 3699999999999999999975 67899999752 24763
Q ss_pred -------C--CCCccHHHHHHHHHHHHhcCCCcE-EEEEeecccC-------CchhhHHHHHH-hCcccccccCCCCC--
Q 043880 147 -------Y--TAFEPAIDTLKEIEAFMSSKPAEI-VTLILEDYVQ-------APNGLTKVFAE-AGLMKYWFPVSKMP-- 206 (355)
Q Consensus 147 -------~--~~~~~l~d~L~eI~~FL~~nP~EV-V~l~l~d~~~-------~~~~l~~~f~~-~gl~~~~~~p~~~~-- 206 (355)
. +...+|.++|++||+|+++||+|+ |+|.||+... .++.+.+.+.+ .| +.+|.|+...
T Consensus 89 as~~~dL~t~Tt~~tL~~CL~~IK~WsdahPsh~PViI~LE~K~t~~~~~g~~p~~lDaeI~~vFG--d~L~tPddvrG~ 166 (339)
T 3h4x_A 89 AANASELRTKSRDQDFAGCLSDMRAWHDAHPGHRPILLKIEMKDGFNAKGGRGPAEFDALIRQKLG--DAVYGPGDLTGG 166 (339)
T ss_dssp CSSGGGTTCSCCCCCHHHHHHHHHHHHHHSTTCCCEEEEEEETTCCBGGGTBSHHHHHHHHHHHHG--GGBCCHHHHHTT
T ss_pred cccccccccCCCCcCHHHHHHHHHHHHHhCCCCCceEEEEecccCcccccCcCHHHHHHHHHHHhc--cceEcchhhccc
Confidence 1 124689999999999999999997 7777775421 13456555554 45 6677664310
Q ss_pred -------CCCCCCCcHHHHHhcCcEEEEEEc
Q 043880 207 -------RNGEDWPLVSDMVANNQRLLVFTS 230 (355)
Q Consensus 207 -------~~~~~wPTL~emi~~gkRlvvf~~ 230 (355)
.....||||++++ ||-||++..
T Consensus 167 ~~TL~eAVla~GWPSl~slR--GKVlf~Ld~ 195 (339)
T 3h4x_A 167 HATADEAVRAGGWPSRADLA--GKFLFELIP 195 (339)
T ss_dssp SSSHHHHHHHHCCCBTGGGT--TCEEEEEEE
T ss_pred ccCHHHHHhcCCCCChHHhC--CCEEEEEeC
Confidence 0124699999986 665555543
No 5
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=97.85 E-value=8.1e-05 Score=80.01 Aligned_cols=140 Identities=18% Similarity=0.245 Sum_probs=94.2
Q ss_pred CCcccccccccccCccCcCCCCCCCCCCCcccccCCcccHHHHHhcCccEEEeEEEee---CCcEEEEecCCCCCccCCC
Q 043880 73 NSLPLNKYAFLTTHNAFAIDHTPSHTGVPRLTFTNQEDNVTQQLKNGVRGLMLDTYDF---KGDVWLCHSFGGKCHDYTA 149 (355)
Q Consensus 73 ~~lpln~ltipGTHNS~a~~~~~~~~g~~~~~~~nQ~~sIt~QL~~GVR~LdLdv~~~---~~~l~lcH~~~~~C~~~~~ 149 (355)
.+.||++|-|=.+||+|-. |.. +.+..=...+.+-|..|+|-++||+++. +++..++||. .++.
T Consensus 314 m~~PLshYfI~SSHNTYL~-g~Q-------l~g~ss~e~y~~aL~~GcRcvElD~Wdg~~~~~ep~v~HG~-----Tlts 380 (799)
T 2zkm_X 314 MTQPLNHYFINSSHNTYLT-AGQ-------FSGLSSAEMYRQVLLSGCRCVELDCWKGKPPDEEPIITHGF-----TMTT 380 (799)
T ss_dssp CCSCGGGEEECBBSSTTBS-SCS-------SSSCBCTHHHHHHHHTTCCEEEEEEECCCTTCCSCEECCTT-----SSCC
T ss_pred cCCchhhheEeccccceee-cCc-------ccCcccHHHHHHHHHhCCCEEEEEeecCCCCCCCCEEEeCC-----cccc
Confidence 4789999999999999854 322 1222234578889999999999999986 4678899995 3455
Q ss_pred CccHHHHHHHHHHHHhcCCCcEEEEEeecccCCc---hhhHHHHHHhCcccccccCCC--CC-CCCCCCCcHHHHHhcCc
Q 043880 150 FEPAIDTLKEIEAFMSSKPAEIVTLILEDYVQAP---NGLTKVFAEAGLMKYWFPVSK--MP-RNGEDWPLVSDMVANNQ 223 (355)
Q Consensus 150 ~~~l~d~L~eI~~FL~~nP~EVV~l~l~d~~~~~---~~l~~~f~~~gl~~~~~~p~~--~~-~~~~~wPTL~emi~~gk 223 (355)
.-+|.|+++.|++.-=..-.==|||.||+.-.++ ..+.+.+.+ .|++.++.++. .+ ..+...|+..+|. |
T Consensus 381 ~i~f~~v~~~I~~~AF~~S~yPvIlslE~Hc~s~~qQ~~ma~~~~~-~~Gd~L~~~~~~~~~~~~~~~lPSP~~Lk--~- 456 (799)
T 2zkm_X 381 DIFFKEAIEAIAESAFKTSPYPIILSFENHVDSPRQQAKMAEYCRT-IFGDMLLTEPLEKFPLKPGVPLPSPEDLR--G- 456 (799)
T ss_dssp CEEHHHHHHHHHHHTTSSCCSCEEEEEEECCCCHHHHHHHHHHHHH-HHGGGBCCSCCTTSCSSTTCCCCCTTTTT--T-
T ss_pred cccHHHHHHHHHHhcccCCCCCEEEEccccCCCHHHHHHHHHHHHH-HhhhheecCCccccccccCCCCCCHHHHC--C-
Confidence 5799999999998653221112799999764122 233455543 34577775322 11 1246799999995 3
Q ss_pred EEEEEE
Q 043880 224 RLLVFT 229 (355)
Q Consensus 224 Rlvvf~ 229 (355)
||||-.
T Consensus 457 kIlik~ 462 (799)
T 2zkm_X 457 KILIKN 462 (799)
T ss_dssp CEEEEC
T ss_pred CEEEEe
Confidence 466543
No 6
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=97.79 E-value=5.5e-05 Score=79.19 Aligned_cols=139 Identities=19% Similarity=0.249 Sum_probs=93.6
Q ss_pred CCcccccccccccCccCcCCCCCCCCCCCcccccCCcccHHHHHhcCccEEEeEEEee-CCcEEEEecCCCCCccCCCCc
Q 043880 73 NSLPLNKYAFLTTHNAFAIDHTPSHTGVPRLTFTNQEDNVTQQLKNGVRGLMLDTYDF-KGDVWLCHSFGGKCHDYTAFE 151 (355)
Q Consensus 73 ~~lpln~ltipGTHNS~a~~~~~~~~g~~~~~~~nQ~~sIt~QL~~GVR~LdLdv~~~-~~~l~lcH~~~~~C~~~~~~~ 151 (355)
.+.||++|=|=.+||+|-. |.. ..| ..=.....+-|..|+|-++||+++. +++..++||. .++..-
T Consensus 166 m~~pLs~Yfi~SsHNTYL~-G~Q-l~~------~ss~e~y~~aL~~GcRcvElD~wdg~~~ep~v~HG~-----tlts~i 232 (624)
T 1djx_A 166 MDQPLSHYLVSSSHNTYLL-EDQ-LTG------PSSTEAYIRALCKGCRCLELDCWDGPNQEPIIYHGY-----TFTSKI 232 (624)
T ss_dssp TTSCGGGEEECEESSTTBS-SCS-SSC------CBCHHHHHHHHHTTCCEEEEEEECCGGGCCEECCTT-----SCCCCE
T ss_pred ccCcchhheeecccchhhh-cCc-ccC------CcCHHHHHHHHHhCCcEEEEEeecCCCCCeEEecCC-----cccccc
Confidence 4689999999999999864 332 122 2224567889999999999999985 5678899995 345557
Q ss_pred cHHHHHHHHHHHHhcCCCcEEEEEeecccCC--chhhHHHHHHhCcccccccCCCCCCCCCCCCcHHHHHhcCcEEEEEE
Q 043880 152 PAIDTLKEIEAFMSSKPAEIVTLILEDYVQA--PNGLTKVFAEAGLMKYWFPVSKMPRNGEDWPLVSDMVANNQRLLVFT 229 (355)
Q Consensus 152 ~l~d~L~eI~~FL~~nP~EVV~l~l~d~~~~--~~~l~~~f~~~gl~~~~~~p~~~~~~~~~wPTL~emi~~gkRlvvf~ 229 (355)
+|.|+++.|+++-=..-.==|||.||+.-.. ...+.+.+.+ .|.+.++.++.-. ....+|+..+|+ | ||||=.
T Consensus 233 ~f~~v~~~I~~~AF~~s~yPvilslE~Hc~~~qQ~~ma~~~~~-~~gd~L~~~~~~~-~~~~lpsp~~Lk--~-kilik~ 307 (624)
T 1djx_A 233 LFCDVLRAIRDYAFKASPYPVILSLENHCSLEQQRVMARHLRA-ILGPILLDQPLDG-VTTSLPSPEQLK--G-KILLKG 307 (624)
T ss_dssp EHHHHHHHHHHHTTTSCSSCEEEEEEEECCHHHHHHHHHHHHH-HHGGGBCCSCCTT-CCSSCCCTTTTT--T-CEEEEE
T ss_pred cHHHHHHHHHHhcccCCCCCEEEEecccCCHHHHHHHHHHHHH-HHhhhhcCCCccC-CcCCCCCHHHHC--C-CEEEEe
Confidence 9999999999875322111279999966321 1233455553 3457777543211 136789999995 3 466644
No 7
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=97.53 E-value=0.00032 Score=76.02 Aligned_cols=140 Identities=22% Similarity=0.266 Sum_probs=93.0
Q ss_pred CCcccccccccccCccCcCCCCCCCCCCCcccccCCcccHHHHHhcCccEEEeEEEee---CCcEEEEecCCCCCccCCC
Q 043880 73 NSLPLNKYAFLTTHNAFAIDHTPSHTGVPRLTFTNQEDNVTQQLKNGVRGLMLDTYDF---KGDVWLCHSFGGKCHDYTA 149 (355)
Q Consensus 73 ~~lpln~ltipGTHNS~a~~~~~~~~g~~~~~~~nQ~~sIt~QL~~GVR~LdLdv~~~---~~~l~lcH~~~~~C~~~~~ 149 (355)
.+.||++|-|=.+||+|-. +.. +.+..=.....+-|..|+|-++||+++. +++..++||. .++.
T Consensus 318 m~~Pls~YfI~ssHNtYL~-g~Q-------l~~~ss~~~y~~aL~~gcRcvEld~wdg~~~~~ep~v~hg~-----t~t~ 384 (885)
T 3ohm_B 318 MTQPLSAYFINSSHNTYLT-AGQ-------LAGTSSVEMYRQALLWGCRCVELDVWKGRPPEEEPFITHGF-----TMTT 384 (885)
T ss_dssp CCSCGGGEEECCBSSTTBS-SCS-------SEECBCSHHHHHHHHTTCCEEEEEEECCCSSSCCCEECSTT-----SEEC
T ss_pred cCcchhhheeeccccceec-ccc-------ccCcCcHHHHHHHHHhCCCEEEEEeeCCCCCCCCCEEeeCC-----cccC
Confidence 4689999999999999853 221 1222223567788999999999999975 5789999995 2444
Q ss_pred CccHHHHHHHHHHHHhcCCCcEEEEEeecccCCc---hhhHHHHHHhCcccccccCCC--CC-CCCCCCCcHHHHHhcCc
Q 043880 150 FEPAIDTLKEIEAFMSSKPAEIVTLILEDYVQAP---NGLTKVFAEAGLMKYWFPVSK--MP-RNGEDWPLVSDMVANNQ 223 (355)
Q Consensus 150 ~~~l~d~L~eI~~FL~~nP~EVV~l~l~d~~~~~---~~l~~~f~~~gl~~~~~~p~~--~~-~~~~~wPTL~emi~~gk 223 (355)
..+|.++++.|+++-=..-.==|||.||+.-.++ ..+.+.+.+ .|.+.++.++. .+ ......|+..+|. |
T Consensus 385 ~i~f~~v~~~i~~~af~~s~yPvilsle~h~~~~~qq~~~a~~~~~-~~g~~L~~~~~~~~~~~~~~~lpsp~~Lk--~- 460 (885)
T 3ohm_B 385 EVPLRDVLEAIAETAFKTSPYPVILSFENHVDSAKQQAKMAEYCRS-IFGDALLIEPLDKYPLAPGVPLPSPQDLM--G- 460 (885)
T ss_dssp CEEHHHHHHHHHHHTTSSCCSCEEEEEEEECCCTTHHHHHHHHHHH-HHGGGBCCSCBTTBCSSSSCCCCCTTTTT--T-
T ss_pred cccHHHHHHHHHHhhccCCCCCEEEEEecCCCCHHHHHHHHHHHHH-HhhHhhccCcccccccccCCcCCCHHHHc--C-
Confidence 5799999999998764322223789999654222 233455543 34577774321 12 2246789999985 3
Q ss_pred EEEEEE
Q 043880 224 RLLVFT 229 (355)
Q Consensus 224 Rlvvf~ 229 (355)
||||-.
T Consensus 461 kilik~ 466 (885)
T 3ohm_B 461 RILVKN 466 (885)
T ss_dssp CEEEEC
T ss_pred cEEEEe
Confidence 355543
No 8
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=97.47 E-value=0.00064 Score=73.17 Aligned_cols=142 Identities=22% Similarity=0.251 Sum_probs=93.8
Q ss_pred CCCcccccccccccCccCcCCCCCCCCCCCcccccCCcccHHHHHhcCccEEEeEEEee-CCcEEEEecCCCCCccCCCC
Q 043880 72 NNSLPLNKYAFLTTHNAFAIDHTPSHTGVPRLTFTNQEDNVTQQLKNGVRGLMLDTYDF-KGDVWLCHSFGGKCHDYTAF 150 (355)
Q Consensus 72 ~~~lpln~ltipGTHNS~a~~~~~~~~g~~~~~~~nQ~~sIt~QL~~GVR~LdLdv~~~-~~~l~lcH~~~~~C~~~~~~ 150 (355)
.-+.||++|-|=.+||+|-. +.. ..| ..=.....+-|..|+|-++||+++. +++..++||. .++..
T Consensus 324 dm~~Pl~~YfI~sshntyL~-g~q-l~g------~ss~~~y~~aL~~gcRcvEld~wdg~~~ePvv~HG~-----Tlts~ 390 (816)
T 3qr0_A 324 NMKLTLAAYYINSSHNTYLT-GHQ-LTG------KSSVEIYRQVLLTGCRCLELDCWDGKDGEPIITHGF-----TMCTE 390 (816)
T ss_dssp CCCSCGGGEEECBBSSTTBS-SCT-TTS------CBCSHHHHHHHHTTCCEEEEEEECCTTSSCEECCTT-----SSCCC
T ss_pred ccCCchhhheecccccchhc-ccc-ccC------cccHHHHHHHHHhCCcEEEEEEecCCCCCceEccCC-----ccccc
Confidence 34689999999999999854 222 122 2223567788999999999999986 4678899995 34555
Q ss_pred ccHHHHHHHHHHHHhcCCCcEEEEEeecccCC--chhhHHHHHHhCcccccccCCC--CC-CCCCCCCcHHHHHhcCcEE
Q 043880 151 EPAIDTLKEIEAFMSSKPAEIVTLILEDYVQA--PNGLTKVFAEAGLMKYWFPVSK--MP-RNGEDWPLVSDMVANNQRL 225 (355)
Q Consensus 151 ~~l~d~L~eI~~FL~~nP~EVV~l~l~d~~~~--~~~l~~~f~~~gl~~~~~~p~~--~~-~~~~~wPTL~emi~~gkRl 225 (355)
-+|.++++.|+++-=..-.==|||.||+.-.. ...+.+.+.+ .|++.++.++. .+ ..+...|+..+|. | ||
T Consensus 391 i~f~~v~~~I~~~AF~~S~yPvIlslE~Hc~~~qQ~~ma~~~~~-~~Gd~L~~~~~~~~~~~~~~~lpsP~~Lk--~-kI 466 (816)
T 3qr0_A 391 VLFKDVVYAIAESAFKVSDYPVILSFENHCSVAQQKLLAQYCNE-AFGELLLDKPIDGHPLKPGVPLPTPYDLR--K-KI 466 (816)
T ss_dssp EEHHHHHHHHHHHTTSSCCSCEEEEEEECCCHHHHHHHHHHHHH-HHGGGBCCSCCTTCCSSTTCCCCCTTTTT--T-CE
T ss_pred ccHHHHHHHHHHhcccCCCCCEEEEEecCCCHHHHHHHHHHHHH-HhhhhhccCCccccccccCCcCCCHHHHc--C-CE
Confidence 79999999999876432222379999976321 1223444443 34577774321 11 1235789999995 3 46
Q ss_pred EEEEc
Q 043880 226 LVFTS 230 (355)
Q Consensus 226 vvf~~ 230 (355)
||-..
T Consensus 467 lik~K 471 (816)
T 3qr0_A 467 LIKNK 471 (816)
T ss_dssp EEECC
T ss_pred EEEeC
Confidence 65543
No 9
>3rlg_A Sphingomyelin phosphodiesterase D lisictox-alphai; TIM beta/alpha-barrel, PLC-like phosphodiesterase, inactive H12A phospholipase D; HET: PGE; 1.60A {Loxosceles intermedia} PDB: 3rlh_A*
Probab=75.66 E-value=4.4 Score=38.46 Aligned_cols=67 Identities=13% Similarity=0.219 Sum_probs=45.3
Q ss_pred cccHHHHHhcCccEEEeEEEee-CCc-EEEEecCCCCCccC---CCCccHHHHHHHHHHHHh----cCCCcEEEEEee
Q 043880 109 EDNVTQQLKNGVRGLMLDTYDF-KGD-VWLCHSFGGKCHDY---TAFEPAIDTLKEIEAFMS----SKPAEIVTLILE 177 (355)
Q Consensus 109 ~~sIt~QL~~GVR~LdLdv~~~-~~~-l~lcH~~~~~C~~~---~~~~~l~d~L~eI~~FL~----~nP~EVV~l~l~ 177 (355)
-..|.+-++.|+.++|+||+.. +|. ++++|+. .|..+ .....+.+.|++|++=.. .++++.++|.|.
T Consensus 39 l~~~~~a~~~GAn~IE~DV~~~~dg~~v~~hhg~--pcdc~r~C~~~~~~~~~l~~lr~~ttpg~~k~~~~l~lv~~D 114 (302)
T 3rlg_A 39 IGQIDEFVNLGANSIETDVSFDDNANPEYTYHGI--PCDCGRNCKKYENFNDFLKGLRSATTPGNSKYQEKLVLVVFD 114 (302)
T ss_dssp HHHHHHHHHTTCSEEEEEECBCTTSCBCBCCCCS--SCCTTCCSCCCCBHHHHHHHHHHHHSTTSTTCCTTCCEEEEE
T ss_pred HHHHHHHHHcCCCEEEEEEEECCCCCEEEEECCC--CcchhccCCCCccHHHHHHHHHHhcCCCCCccccceEEEEEE
Confidence 3578888899999999999974 444 5555654 34332 123688999999988775 445566544443
No 10
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=63.78 E-value=9.8 Score=34.09 Aligned_cols=73 Identities=12% Similarity=0.031 Sum_probs=47.5
Q ss_pred cCCcccHHHHHhcCccEEEeEEEe-eCCcEEEEecCC---CCCcc--------CC--CCccHHHHHHHHHHHHhcCCCcE
Q 043880 106 TNQEDNVTQQLKNGVRGLMLDTYD-FKGDVWLCHSFG---GKCHD--------YT--AFEPAIDTLKEIEAFMSSKPAEI 171 (355)
Q Consensus 106 ~nQ~~sIt~QL~~GVR~LdLdv~~-~~~~l~lcH~~~---~~C~~--------~~--~~~~l~d~L~eI~~FL~~nP~EV 171 (355)
.|=-.++..-++.|++++++||+. .+|.+.+.|... +.-.. ++ ...+ .-.|+|+.+++..+|+-.
T Consensus 21 ENTl~Af~~A~~~G~d~iE~DV~lT~Dg~~Vv~HD~~l~~~~v~~~t~~el~~l~~~~~~~-iptL~evl~~~~~~~~~~ 99 (238)
T 3no3_A 21 QNSIRSLERASEIGAYGSEFDVHLTADNVLVVYHDNDIQGKHIQSCTYDELKDLQLSNGEK-LPTLEQYLKRAKKLKNIR 99 (238)
T ss_dssp TTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSEETTEEGGGSCHHHHTTCBCTTSCB-CCBHHHHHHHHHHCTTCE
T ss_pred ccHHHHHHHHHHcCCCEEEEEeeEccCCcEEEECCCCCCCCChHhCCHHHHhhCCCCCCCc-CCcHHHHHHHHhhcCCce
Confidence 344467888899999999999997 577899999741 00000 00 0011 124667777777788767
Q ss_pred EEEEeecc
Q 043880 172 VTLILEDY 179 (355)
Q Consensus 172 V~l~l~d~ 179 (355)
+.|.++..
T Consensus 100 l~iEiK~~ 107 (238)
T 3no3_A 100 LIFELKSH 107 (238)
T ss_dssp EEEEECCC
T ss_pred EEEEeCCC
Confidence 78888854
No 11
>1xx1_A Smase I, sphingomyelinase I; structure, quick cryo-soaking, activity, smase D, hydrolase; HET: EPE; 1.75A {Loxosceles laeta} PDB: 2f9r_A*
Probab=60.87 E-value=16 Score=33.34 Aligned_cols=69 Identities=14% Similarity=0.023 Sum_probs=46.0
Q ss_pred ccHHHHHhcCccEEEeEEEeeCCcEEEEecCCCCCcc---CCCCccHHHHHHHHHHHHh----cCCCc--EEEEEeecc
Q 043880 110 DNVTQQLKNGVRGLMLDTYDFKGDVWLCHSFGGKCHD---YTAFEPAIDTLKEIEAFMS----SKPAE--IVTLILEDY 179 (355)
Q Consensus 110 ~sIt~QL~~GVR~LdLdv~~~~~~l~lcH~~~~~C~~---~~~~~~l~d~L~eI~~FL~----~nP~E--VV~l~l~d~ 179 (355)
.++..-++.|+.++++||+..+|.+.+.|... .|.+ -++.+.+.+.|.||++.-. ..+++ .+.|.++..
T Consensus 18 ~Af~~A~~~Gad~IE~DV~lkDG~lVv~HD~~-~~~l~Rtt~~~g~v~d~l~eL~~l~~~~~~~~~~~L~~l~iEiK~~ 95 (285)
T 1xx1_A 18 AQIPDFLDLGANALEADVTFKGSVPTYTYHGT-PCDFGRDCIRWEYFNVFLKTLREYTTPGNAKYRDGFILFVLDLKTG 95 (285)
T ss_dssp THHHHHHHHTCSEEEEEEEEETTEEEEEECCS-SCCTTSCSCCEEEHHHHHHHHHHHTSTTCTTCCTTCCEEEEEECCT
T ss_pred HHHHHHHHhCCCEEEEEEEEECCEEEEEcCCc-ccccccccCCCccHHHHHHHHHHcccCCCCcccccccEEEEecCCC
Confidence 36777889999999999999777889999741 1211 1122578888999988642 11122 566666643
No 12
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=59.79 E-value=44 Score=29.86 Aligned_cols=35 Identities=11% Similarity=0.118 Sum_probs=29.0
Q ss_pred cCCcccHHHHHhcCccEEEeEEEe-eCCcEEEEecC
Q 043880 106 TNQEDNVTQQLKNGVRGLMLDTYD-FKGDVWLCHSF 140 (355)
Q Consensus 106 ~nQ~~sIt~QL~~GVR~LdLdv~~-~~~~l~lcH~~ 140 (355)
.|=-.++..-++.|++++++||+. .+|.+.+.|..
T Consensus 17 ENTl~af~~A~~~G~d~iE~DV~lT~Dg~~Vv~HD~ 52 (250)
T 3ks6_A 17 DSTPHGFTATAAMALEEVEFDLHPTADGAIVVHHDP 52 (250)
T ss_dssp TTCHHHHHHHHTSSSSEEEEEEEECTTSCEEECSSS
T ss_pred cchHHHHHHHHHcCCCEEEEEEeEccCCCEEEECCC
Confidence 344467888899999999999997 67889999974
No 13
>1h59_B Insulin-like growth factor binding protein 5; IGF binding protein; 2.1A {Homo sapiens} SCOP: g.3.9.1 PDB: 1boe_A
Probab=54.22 E-value=4.6 Score=28.59 Aligned_cols=22 Identities=23% Similarity=0.499 Sum_probs=18.8
Q ss_pred ccccccccCCC-CCCCCCCccCC
Q 043880 28 QRKLLEQCSSD-GDCEAGLYCFS 49 (355)
Q Consensus 28 ~~~~~~~c~~~-~~c~~~~~c~~ 49 (355)
++..|+.|-.. .+|++||+|.-
T Consensus 2 Al~~G~~CGVyT~rC~~GLRC~p 24 (54)
T 1h59_B 2 ALAEGQSCGVYTERCAQGLRCLP 24 (54)
T ss_dssp CBCTTCEECTTSCCBCTTCEEEC
T ss_pred cccCCCcCeeecccccCCccccC
Confidence 57889999776 89999999965
No 14
>2jtk_A Dickkopf-related protein 2; domain, developmental protein, glycoprotein, secreted, WNT signaling pathway, signaling protein; NMR {Mus musculus}
Probab=47.64 E-value=8.7 Score=30.00 Aligned_cols=21 Identities=24% Similarity=0.588 Sum_probs=17.8
Q ss_pred ccccccccCCCCCCCCCCccC
Q 043880 28 QRKLLEQCSSDGDCEAGLYCF 48 (355)
Q Consensus 28 ~~~~~~~c~~~~~c~~~~~c~ 48 (355)
.-++|+.|..+.||++|+=|+
T Consensus 7 ~g~~G~~C~~~~dC~~G~CCA 27 (90)
T 2jtk_A 7 KGHEGDPCLRSSDCIDGFCCA 27 (90)
T ss_dssp CCSSSCBCCSSCCSCTTEEEE
T ss_pred CCCcCCcccCcCCCCCcceeC
Confidence 457899999999999999553
No 15
>3zxw_B Ribulose bisphosphate carboxylase small chain; CO2/O2 specificity, carbon dioxide fixation, photosynthesis, thermostability; HET: KCX CAP; 2.10A {Thermosynechococcus elongatus} PDB: 2ybv_B*
Probab=45.90 E-value=25 Score=28.75 Aligned_cols=32 Identities=22% Similarity=0.312 Sum_probs=25.8
Q ss_pred cCCCCccHHHHHHHHHHHHhcCCCcEEEEEeec
Q 043880 146 DYTAFEPAIDTLKEIEAFMSSKPAEIVTLILED 178 (355)
Q Consensus 146 ~~~~~~~l~d~L~eI~~FL~~nP~EVV~l~l~d 178 (355)
.|+. ....++|.||.+-+++||+|-|-|.==|
T Consensus 60 mf~~-~d~~~Vl~Ele~C~k~~p~~yVRliGfD 91 (118)
T 3zxw_B 60 LFNC-TNAQDVLNEVQQCRSEYPNCFIRVVAFD 91 (118)
T ss_dssp CTTC-CCHHHHHHHHHHHHHHCTTSEEEEEEEE
T ss_pred CcCC-CCHHHHHHHHHHHHHHCCCceEEEEEEe
Confidence 3543 6778999999999999999999666444
No 16
>1rbl_M Ribulose 1,5 bisphosphate carboxylase/oxygenase ( chain); lyase(carbon-carbon), lyase; HET: CAP; 2.20A {Synechococcus elongatus} SCOP: d.73.1.1 PDB: 1rsc_M*
Probab=45.70 E-value=26 Score=28.26 Aligned_cols=32 Identities=13% Similarity=0.064 Sum_probs=25.5
Q ss_pred cCCCCccHHHHHHHHHHHHhcCCCcEEEEEeec
Q 043880 146 DYTAFEPAIDTLKEIEAFMSSKPAEIVTLILED 178 (355)
Q Consensus 146 ~~~~~~~l~d~L~eI~~FL~~nP~EVV~l~l~d 178 (355)
.|+. ....++|.||.+-+++||+|-|-|.==|
T Consensus 61 mf~~-~d~~~Vl~Ele~C~k~~p~~yVRligfD 92 (109)
T 1rbl_M 61 LFAC-AAPQQVLDEVRECRSEYGDCYIRVAGFD 92 (109)
T ss_dssp CTTC-CCHHHHHHHHHHHHHHCTTSEEEEEEEE
T ss_pred CcCC-CCHHHHHHHHHHHHHHCCCCeEEEEEEe
Confidence 3443 5679999999999999999998665444
No 17
>1svd_M Ribulose bisphosphate carboxylase small chain; beta-alpha-barrel, lyase; 1.80A {Halothiobacillus neapolitanus} SCOP: d.73.1.1
Probab=45.57 E-value=25 Score=28.37 Aligned_cols=32 Identities=31% Similarity=0.343 Sum_probs=25.4
Q ss_pred cCCCCccHHHHHHHHHHHHhcCCCcEEEEEeec
Q 043880 146 DYTAFEPAIDTLKEIEAFMSSKPAEIVTLILED 178 (355)
Q Consensus 146 ~~~~~~~l~d~L~eI~~FL~~nP~EVV~l~l~d 178 (355)
.|+. ....++|.||.+-+++||+|-|-|.==|
T Consensus 63 mf~~-~d~~~Vl~El~~C~k~~p~~yVRligfD 94 (110)
T 1svd_M 63 FFGE-QNVDNVLAEIEACRSAYPTHQVKLVAYD 94 (110)
T ss_dssp CTTC-CCHHHHHHHHHHHHHHSTTSEEEEEEEE
T ss_pred CcCC-CCHHHHHHHHHHHHHHCCCCeEEEEEEe
Confidence 3443 5679999999999999999998665443
No 18
>1bwv_S Rubisco, protein (ribulose bisphosphate carboxylase); carbon dioxide fixation, complex (rubisco-reaction intermedi high specificity factor; HET: KCX CAP; 2.40A {Galdieria partita} SCOP: d.73.1.1 PDB: 1iwa_B
Probab=41.15 E-value=31 Score=28.91 Aligned_cols=32 Identities=13% Similarity=0.090 Sum_probs=25.6
Q ss_pred cCCCCccHHHHHHHHHHHHhcCCCcEEEEEeec
Q 043880 146 DYTAFEPAIDTLKEIEAFMSSKPAEIVTLILED 178 (355)
Q Consensus 146 ~~~~~~~l~d~L~eI~~FL~~nP~EVV~l~l~d 178 (355)
.|+. ....++|.||.+-+++||+|-|-|.==|
T Consensus 55 mF~~-td~~~Vl~Ele~C~k~~p~~YVRliGfD 86 (138)
T 1bwv_S 55 LFDV-TDPAAVLFEINACRKARSNFYIKVVGFS 86 (138)
T ss_dssp BCSC-CCHHHHHHHHHHHHHHCTTSEEEEEEEE
T ss_pred CcCC-CCHHHHHHHHHHHHHHCCCCeEEEEEEe
Confidence 3443 5779999999999999999998665444
No 19
>1bxn_I Rubisco, protein (ribulose bisphosphate carboxylase small; lyase (carbon-carbon), lyase; 2.70A {Cupriavidus necator} SCOP: d.73.1.1
Probab=40.53 E-value=31 Score=28.93 Aligned_cols=32 Identities=19% Similarity=0.192 Sum_probs=25.7
Q ss_pred cCCCCccHHHHHHHHHHHHhcCCCcEEEEEeec
Q 043880 146 DYTAFEPAIDTLKEIEAFMSSKPAEIVTLILED 178 (355)
Q Consensus 146 ~~~~~~~l~d~L~eI~~FL~~nP~EVV~l~l~d 178 (355)
.|+. ....++|.||.+-+++||+|-|-|.==|
T Consensus 55 mF~~-td~~~Vl~Ele~C~k~~p~~YVRliGfD 86 (139)
T 1bxn_I 55 MFDL-RDAAGILMEINNARNTFPNHYIRVTAFD 86 (139)
T ss_dssp BTTC-CCHHHHHHHHHHHHHHCSSSEEEEEEEC
T ss_pred CcCC-CCHHHHHHHHHHHHHHCCCCeEEEEEEe
Confidence 3443 5779999999999999999998666444
No 20
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=38.27 E-value=16 Score=32.81 Aligned_cols=37 Identities=19% Similarity=0.205 Sum_probs=30.4
Q ss_pred cccCCcccHHHHHhcCccEEEeEEEe-eCCcEEEEecC
Q 043880 104 TFTNQEDNVTQQLKNGVRGLMLDTYD-FKGDVWLCHSF 140 (355)
Q Consensus 104 ~~~nQ~~sIt~QL~~GVR~LdLdv~~-~~~~l~lcH~~ 140 (355)
...|=-.++..-++.|+.++++||+. .+|.+.+.|..
T Consensus 24 ~PENTl~Af~~A~~~Gad~iE~DV~lTkDG~lVv~HD~ 61 (252)
T 2pz0_A 24 VPENTIAAFKRAMELGADGIELDVQLTKDGHLVVIHDE 61 (252)
T ss_dssp SCTTSHHHHHHHHHHTCSEEEEEEEECTTCCEEECSSS
T ss_pred CCcchHHHHHHHHHcCCCEEEEEEEEecCCeEEEEcCC
Confidence 34555567888899999999999997 57889999974
No 21
>2dt7_A Splicing factor 3A subunit 3; structure genomics, SF3A120, SF3A60, SURP domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.49 E-value=12 Score=24.51 Aligned_cols=22 Identities=36% Similarity=0.617 Sum_probs=19.4
Q ss_pred CccHHHHHHHHHHHHhcCCCcE
Q 043880 150 FEPAIDTLKEIEAFMSSKPAEI 171 (355)
Q Consensus 150 ~~~l~d~L~eI~~FL~~nP~EV 171 (355)
+..+-+-|++|++|=+.+|+|+
T Consensus 12 f~~FY~rlk~Ike~Hrr~P~~~ 33 (38)
T 2dt7_A 12 FAEFYNRLKQIKEFHRKHPNEI 33 (38)
T ss_dssp HHHHHHHHHHHHHHHHSCCSSC
T ss_pred HHHHHHHHHHHHHHHHhCCCcc
Confidence 3567889999999999999987
No 22
>4f0h_B Ribulose bisphosphate carboxylase small chain; alpha beta domain, catalytic domain TIM barrel, carboxylase/oxygenase, nitrosylation; 1.96A {Galdieria sulphuraria} PDB: 4f0k_B 4f0m_B 1iwa_B 1bwv_S*
Probab=36.14 E-value=41 Score=28.17 Aligned_cols=32 Identities=16% Similarity=0.090 Sum_probs=25.7
Q ss_pred cCCCCccHHHHHHHHHHHHhcCCCcEEEEEeec
Q 043880 146 DYTAFEPAIDTLKEIEAFMSSKPAEIVTLILED 178 (355)
Q Consensus 146 ~~~~~~~l~d~L~eI~~FL~~nP~EVV~l~l~d 178 (355)
.|+. ....++|.||.+-+++||+|-|-|.==|
T Consensus 55 mFg~-~d~~~Vl~Ele~C~k~~p~~YVRliGfD 86 (138)
T 4f0h_B 55 LFEV-TDPAPVLFEINACRKAKSNFYIKVVGFS 86 (138)
T ss_dssp BCSC-CSHHHHHHHHHHHHHHTTTSEEEEEEEE
T ss_pred CcCC-CCHHHHHHHHHHHHHHCCCCeEEEEEEe
Confidence 3443 6789999999999999999998666444
No 23
>1imt_A MIT1, intestinal toxin 1; venom, structural homologue of colipase, resistance to endoproteases, contract guinea PIG ileum; NMR {Dendroaspis polylepis polylepis} SCOP: g.3.10.1 g.3.10.1
Probab=34.14 E-value=8.5 Score=29.27 Aligned_cols=17 Identities=29% Similarity=0.780 Sum_probs=14.5
Q ss_pred cccccCCCCCCCCCCcc
Q 043880 31 LLEQCSSDGDCEAGLYC 47 (355)
Q Consensus 31 ~~~~c~~~~~c~~~~~c 47 (355)
+...|+++.||++|+=|
T Consensus 3 itg~C~~d~dC~~G~CC 19 (80)
T 1imt_A 3 ITGACERDLQCGKGTCC 19 (80)
T ss_dssp CCSBCSSGGGTCTTEEE
T ss_pred eecccCCCCCCCCCccc
Confidence 57789999999999744
No 24
>1wdd_S Ribulose bisphosphate carboxylase small chain C; rubisco, photosynthesis, alpha/beta barrel, N-methylmethioni translational modification, lyase; HET: KCX CAP; 1.35A {Oryza sativa} SCOP: d.73.1.1 PDB: 3axm_S* 3axk_S* 8ruc_I* 1aus_S 1rbo_S* 1rco_S* 1rcx_S* 1rxo_S* 1upm_C* 1upp_I* 1aa1_S* 3rub_S 1rlc_S* 1rld_S 1ej7_S 1ir1_S* 4rub_S*
Probab=33.87 E-value=48 Score=27.39 Aligned_cols=28 Identities=32% Similarity=0.349 Sum_probs=23.5
Q ss_pred ccHHHHHHHHHHHHhcCCCcEEEEEeec
Q 043880 151 EPAIDTLKEIEAFMSSKPAEIVTLILED 178 (355)
Q Consensus 151 ~~l~d~L~eI~~FL~~nP~EVV~l~l~d 178 (355)
....++|.||.+-+++||++-|-|.==|
T Consensus 77 td~~~Vl~El~~C~k~~P~~YVRligfD 104 (128)
T 1wdd_S 77 TDATQVLKELEEAKKAYPDAFVRIIGFD 104 (128)
T ss_dssp CCHHHHHHHHHHHHHHCTTSEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCeEEEEEEe
Confidence 5778999999999999999998665333
No 25
>2kra_A Prokineticin BV8; beta strands, beta turn, helix, disulfide bond, secreted, CO protein; NMR {Bombina variegata}
Probab=33.48 E-value=16 Score=27.51 Aligned_cols=18 Identities=28% Similarity=0.754 Sum_probs=14.8
Q ss_pred cccccCCCCCCCCCCccC
Q 043880 31 LLEQCSSDGDCEAGLYCF 48 (355)
Q Consensus 31 ~~~~c~~~~~c~~~~~c~ 48 (355)
+...|+++.||++|+=|+
T Consensus 3 itg~C~~d~dC~~G~CCa 20 (77)
T 2kra_A 3 ITGACDKDVQCGSGTCCA 20 (77)
T ss_dssp CSCSCSSGGGSCTTEECS
T ss_pred cccccCCCCCCCCCcccC
Confidence 567899999999998553
No 26
>1gk8_I Ribulose bisphosphate carboxylase small chain 1; lyase, rubisco, photosynthesis; HET: KCX CAP; 1.4A {Chlamydomonas reinhardtii} SCOP: d.73.1.1 PDB: 2v63_I* 2v67_I* 2v68_I* 2v69_I* 2v6a_I* 2vdh_I* 2vdi_I* 1uw9_C* 1uwa_C* 1ir2_I* 1uzd_C* 1uzh_C*
Probab=32.68 E-value=51 Score=27.67 Aligned_cols=28 Identities=29% Similarity=0.373 Sum_probs=23.6
Q ss_pred ccHHHHHHHHHHHHhcCCCcEEEEEeec
Q 043880 151 EPAIDTLKEIEAFMSSKPAEIVTLILED 178 (355)
Q Consensus 151 ~~l~d~L~eI~~FL~~nP~EVV~l~l~d 178 (355)
....++|.||.+-+++||++-|-|.==|
T Consensus 84 td~~qVl~El~~C~k~~P~~YVRligfD 111 (140)
T 1gk8_I 84 RDPMQVLREIVACTKAFPDAYVRLVAFD 111 (140)
T ss_dssp CCHHHHHHHHHHHHHHCTTSEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCeEEEEEEe
Confidence 5678999999999999999998665333
No 27
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=31.47 E-value=34 Score=30.66 Aligned_cols=35 Identities=14% Similarity=0.123 Sum_probs=28.8
Q ss_pred cCCcccHHHHHhcCccEEEeEEEe-eCCcEEEEecC
Q 043880 106 TNQEDNVTQQLKNGVRGLMLDTYD-FKGDVWLCHSF 140 (355)
Q Consensus 106 ~nQ~~sIt~QL~~GVR~LdLdv~~-~~~~l~lcH~~ 140 (355)
.|=-.++..-++.|+.++++||+. .+|.+.+.|..
T Consensus 23 ENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~ 58 (258)
T 2o55_A 23 ENTLRSFVLCMERNIPYIETDLRVCKTGEIVLFHGT 58 (258)
T ss_dssp TTCHHHHHHHHHTTCCEEEEEEEECTTSCEEECCCS
T ss_pred ccHHHHHHHHHHcCcCEEEEEEEEecCCeEEEEeCC
Confidence 333457888889999999999997 57889999985
No 28
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=31.05 E-value=47 Score=29.43 Aligned_cols=36 Identities=19% Similarity=0.198 Sum_probs=29.5
Q ss_pred ccCCcccHHHHHhcCccEEEeEEEe-eCCcEEEEecC
Q 043880 105 FTNQEDNVTQQLKNGVRGLMLDTYD-FKGDVWLCHSF 140 (355)
Q Consensus 105 ~~nQ~~sIt~QL~~GVR~LdLdv~~-~~~~l~lcH~~ 140 (355)
..|=-.++..-++.|+.++++||+. .+|.+.+.|..
T Consensus 20 PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~ 56 (247)
T 2otd_A 20 PENTLAAIDVGAKYGHKMIEFDAKLSKDGEIFLLHDD 56 (247)
T ss_dssp CSSSHHHHHHHHHTTCSEEEEEEEECTTCCEEECSSS
T ss_pred CchhHHHHHHHHHcCCCEEEEEeeEccCCcEEEECCC
Confidence 3444567888899999999999997 47889999974
No 29
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=30.89 E-value=47 Score=29.58 Aligned_cols=36 Identities=19% Similarity=0.222 Sum_probs=29.6
Q ss_pred ccCCcccHHHHHhcCccEEEeEEEe-eCCcEEEEecC
Q 043880 105 FTNQEDNVTQQLKNGVRGLMLDTYD-FKGDVWLCHSF 140 (355)
Q Consensus 105 ~~nQ~~sIt~QL~~GVR~LdLdv~~-~~~~l~lcH~~ 140 (355)
..|=-.++..-++.|+.++++||+. .+|.+.+.|..
T Consensus 15 PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~ 51 (248)
T 1zcc_A 15 PENTFAAADLALQQGADYIELDVRESADGVLYVIHDE 51 (248)
T ss_dssp CSSSHHHHHHHHHTTCSEEEEEEEECTTCCEEECSSS
T ss_pred CchHHHHHHHHHHcCCCEEEEEeeEcCCCCEEEECCC
Confidence 3444567888899999999999997 47889999974
No 30
>1o1z_A GDPD, glycerophosphodiester phosphodiesterase; TM1621, glycerophosphodiester phosphodiesterase (GDPD), STRU genomics, JCSG, PSI; 1.60A {Thermotoga maritima} SCOP: c.1.18.3
Probab=30.58 E-value=43 Score=29.65 Aligned_cols=37 Identities=22% Similarity=0.306 Sum_probs=30.4
Q ss_pred cccCCcccHHHHHhcCccEEEeEEEe-eCCcEEEEecC
Q 043880 104 TFTNQEDNVTQQLKNGVRGLMLDTYD-FKGDVWLCHSF 140 (355)
Q Consensus 104 ~~~nQ~~sIt~QL~~GVR~LdLdv~~-~~~~l~lcH~~ 140 (355)
...|=-.++..-++.|+.++++||+. .+|.+.+.|..
T Consensus 25 ~PENTl~Af~~A~~~Gad~iE~DV~lTkDG~lVv~HD~ 62 (234)
T 1o1z_A 25 YLENTLEAFMKAIEAGANGVELDVRLSKDGKVVVSHDE 62 (234)
T ss_dssp SCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSS
T ss_pred CCCchHHHHHHHHHcCCCEEEEEeeEecCCCEEEEcCC
Confidence 34555578888999999999999997 56789999974
No 31
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=30.24 E-value=44 Score=29.24 Aligned_cols=36 Identities=22% Similarity=0.285 Sum_probs=29.7
Q ss_pred ccCCcccHHHHHhcCccEEEeEEEe-eCCcEEEEecC
Q 043880 105 FTNQEDNVTQQLKNGVRGLMLDTYD-FKGDVWLCHSF 140 (355)
Q Consensus 105 ~~nQ~~sIt~QL~~GVR~LdLdv~~-~~~~l~lcH~~ 140 (355)
..|=-.++..-++.|+.++++||+. .+|.+.+.|..
T Consensus 21 PENTl~Af~~A~~~G~d~iE~DV~lT~Dg~lVv~HD~ 57 (224)
T 1vd6_A 21 KENTLESFRLALEAGLDGVELDVWPTRDGVFAVRHDP 57 (224)
T ss_dssp CTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSCS
T ss_pred CcchHHHHHHHHHcCCCEEEEEeeEecCCcEEEECCC
Confidence 3444567888899999999999997 47889999985
No 32
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=28.76 E-value=49 Score=29.57 Aligned_cols=35 Identities=14% Similarity=0.080 Sum_probs=29.0
Q ss_pred cCCcccHHHHHhcCccEEEeEEEe-eCCcEEEEecC
Q 043880 106 TNQEDNVTQQLKNGVRGLMLDTYD-FKGDVWLCHSF 140 (355)
Q Consensus 106 ~nQ~~sIt~QL~~GVR~LdLdv~~-~~~~l~lcH~~ 140 (355)
.|=-.++..-++.|++++++||+. .+|.+.+.|..
T Consensus 24 ENTl~af~~A~~~G~d~iE~DV~lT~Dg~~Vv~HD~ 59 (252)
T 3qvq_A 24 ENTLASLHLAGQQGIKWVEIDVMLSGDGIPVIFHDD 59 (252)
T ss_dssp TTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECCCS
T ss_pred ccHHHHHHHHHHcCCCEEEEEEEECCCCcEEEECCC
Confidence 444567888899999999999997 67789999974
No 33
>3ch0_A Glycerophosphodiester phosphodiesterase; YP_677622.1, glycerophosphoryl diester phosphodiesterase, ST genomics; HET: MSE CIT GOL; 1.50A {Cytophaga hutchinsonii atcc 33406}
Probab=28.52 E-value=50 Score=29.66 Aligned_cols=36 Identities=25% Similarity=0.140 Sum_probs=29.4
Q ss_pred ccCCcccHHHHHhcCccEEEeEEEe-eCCcEEEEecC
Q 043880 105 FTNQEDNVTQQLKNGVRGLMLDTYD-FKGDVWLCHSF 140 (355)
Q Consensus 105 ~~nQ~~sIt~QL~~GVR~LdLdv~~-~~~~l~lcH~~ 140 (355)
..|=-.++..-++.|+.++++||+. .+|.+.+.|..
T Consensus 22 PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~ 58 (272)
T 3ch0_A 22 PENTIAAFTKALLLGVTTLEFDLVISKDNRVVVSHDT 58 (272)
T ss_dssp STTSHHHHHHHHHHTCSEEEEEEEECTTCCEEECSSS
T ss_pred CcccHHHHHHHHHcCCCEEEEeeeEcCCCcEEEeCCC
Confidence 3444567888899999999999996 56789999974
No 34
>4cpa_I Metallocarboxypeptidase inhibitor; hydrolase (C-terminal peptidase); 2.50A {Solanum tuberosum} SCOP: g.3.2.1 PDB: 1h20_A
Probab=28.18 E-value=27 Score=22.44 Aligned_cols=20 Identities=25% Similarity=0.831 Sum_probs=17.3
Q ss_pred ccccCCCCCCCCCCccCCCC
Q 043880 32 LEQCSSDGDCEAGLYCFSCP 51 (355)
Q Consensus 32 ~~~c~~~~~c~~~~~c~~c~ 51 (355)
+..|+...||..|-.|..|.
T Consensus 9 ~KPC~T~DDCS~gw~CqaC~ 28 (38)
T 4cpa_I 9 NKPCKTHDDCSGAWFCQACW 28 (38)
T ss_dssp TCBCSSSSSSCCCSSCCEEE
T ss_pred CCCccCccccccchHHHHHH
Confidence 56788889999999999886
No 35
>3s2k_C Dickkopf-related protein 1; WNT CO-receptor, beta-propeller, EGF domain, WNT signaling, inhibitor, glycosylation, signaling protein; HET: NAG FUC; 2.80A {Homo sapiens} PDB: 3s8v_X
Probab=26.94 E-value=16 Score=28.94 Aligned_cols=20 Identities=30% Similarity=0.708 Sum_probs=16.8
Q ss_pred ccccccccCCCCCCCCCCcc
Q 043880 28 QRKLLEQCSSDGDCEAGLYC 47 (355)
Q Consensus 28 ~~~~~~~c~~~~~c~~~~~c 47 (355)
.=+.|+.|..+.||++|+=|
T Consensus 8 ~G~~Ge~C~~d~DC~~G~CC 27 (97)
T 3s2k_C 8 KGQEGSVCLRSSDCASGLCC 27 (97)
T ss_dssp CBCTTCBCSSGGGBCTTEEE
T ss_pred CCCCCCcCCCcCCCCCCccc
Confidence 34789999999999999843
No 36
>1lpb_A Colipase; hydrolase(carboxylic esterase); HET: BOG MUP; 2.46A {Sus scrofa} SCOP: g.3.10.1 g.3.10.1 PDB: 1eth_B* 1lpa_A* 1n8s_C 1pcn_A 1pco_A
Probab=24.94 E-value=31 Score=27.09 Aligned_cols=17 Identities=18% Similarity=0.397 Sum_probs=15.8
Q ss_pred ccccccccCCCCCCCCC
Q 043880 28 QRKLLEQCSSDGDCEAG 44 (355)
Q Consensus 28 ~~~~~~~c~~~~~c~~~ 44 (355)
.+..||.|..+.+|++|
T Consensus 10 ~l~~Ge~C~~~~QC~sg 26 (95)
T 1lpb_A 10 NLDEGELCLNSAQCKSN 26 (95)
T ss_dssp SBCBTSBCSSGGGBSSS
T ss_pred cCCCCCccccccccCcc
Confidence 57899999999999999
No 37
>1t6t_1 Putative protein; structural genomics, PSI, protein structur initiative, midwest center for structural genomics, MCSG, U function; 1.80A {Aquifex aeolicus} SCOP: c.136.1.1
Probab=24.53 E-value=1e+02 Score=24.88 Aligned_cols=67 Identities=12% Similarity=0.174 Sum_probs=37.4
Q ss_pred CccHHHHHHHHHHHHhcCCCcEEEEEeecccCCchhhHHHHHHhCcccccccCCCCCCCCCCCCcHHHHHhcCcE-EEEE
Q 043880 150 FEPAIDTLKEIEAFMSSKPAEIVTLILEDYVQAPNGLTKVFAEAGLMKYWFPVSKMPRNGEDWPLVSDMVANNQR-LLVF 228 (355)
Q Consensus 150 ~~~l~d~L~eI~~FL~~nP~EVV~l~l~d~~~~~~~l~~~f~~~gl~~~~~~p~~~~~~~~~wPTL~emi~~gkR-lvvf 228 (355)
+..+.+++++++++.+ +|+ |.+|-+ .+...+ ..+|..+-+.+ .+...+.+-++..+.++ |+||
T Consensus 5 ~~~l~e~~~~l~~~s~---~~v--IvVEGk----~D~~~L-~~~g~~~iI~t------~Gtal~~~i~~l~~~~~~VIIl 68 (118)
T 1t6t_1 5 PRNLSEWIKELKKASR---EAV--ILVEGK----NDKKAL-SKFSIKNVIDL------SGKRYADVVDMLEGKWEKVILL 68 (118)
T ss_dssp CCSHHHHHHHHHHHTT---TSE--EEESSH----HHHHHH-HTTTCCCEEEC------TTSCHHHHHHHHTTTCSEEEEC
T ss_pred HHHHHHHHHHHHHhcC---CcE--EEEECh----HHHHHH-HHhCcCcEEEE------CCCcHHHHHHHHHhCCCEEEEE
Confidence 3678899999999886 564 334432 122223 33565533332 12222334444555666 9999
Q ss_pred EcCC
Q 043880 229 TSNK 232 (355)
Q Consensus 229 ~~~~ 232 (355)
+|.+
T Consensus 69 tD~D 72 (118)
T 1t6t_1 69 FDLD 72 (118)
T ss_dssp CCSS
T ss_pred ECCC
Confidence 9865
No 38
>2k7r_A Primosomal protein DNAI; DNAI N-terminal domain, helicase-loading protein, ATP- binding, DNA replication, nucleotide-binding, primosome; NMR {Bacillus subtilis}
Probab=23.48 E-value=26 Score=27.56 Aligned_cols=14 Identities=21% Similarity=0.570 Sum_probs=12.4
Q ss_pred HHHHHHHhcCCCcE
Q 043880 158 KEIEAFMSSKPAEI 171 (355)
Q Consensus 158 ~eI~~FL~~nP~EV 171 (355)
-+|++||.+||+|+
T Consensus 32 P~V~~Fl~~h~~~l 45 (106)
T 2k7r_A 32 QDVQAFLKENEEVI 45 (106)
T ss_dssp HHHHHHHHHSTTTC
T ss_pred HHHHHHHHHChhhC
Confidence 47999999999887
No 39
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=23.31 E-value=29 Score=30.63 Aligned_cols=29 Identities=31% Similarity=0.897 Sum_probs=20.6
Q ss_pred cccCCCCCCCCCCccCCCCCCCCCCceecc
Q 043880 33 EQCSSDGDCEAGLYCFSCPERFSGSRCVRS 62 (355)
Q Consensus 33 ~~c~~~~~c~~~~~c~~c~~~~~~~~c~r~ 62 (355)
..|+..+.|-+-..| .|++|+.++.|--.
T Consensus 153 ~~C~ngG~Cv~P~~C-~C~~Gw~G~~C~~~ 181 (188)
T 2ygo_A 153 GGCRNGGFCNERRIC-ECPDGFHGPHCEGT 181 (188)
T ss_dssp TCCCTTCEECTTSCE-ECCTTCBTTTTCBC
T ss_pred CCCCCCCEeCCCCcc-cCcCCCCCCCCcCC
Confidence 455555566666666 89999999999643
No 40
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=20.44 E-value=59 Score=30.02 Aligned_cols=35 Identities=14% Similarity=0.060 Sum_probs=28.5
Q ss_pred cCCcccHHHHHhcCccEEEeEEEe-eCCcEEEEecC
Q 043880 106 TNQEDNVTQQLKNGVRGLMLDTYD-FKGDVWLCHSF 140 (355)
Q Consensus 106 ~nQ~~sIt~QL~~GVR~LdLdv~~-~~~~l~lcH~~ 140 (355)
.|=-.++..-++.|+.++++||+. .+|.+.+.|..
T Consensus 47 ENTl~af~~A~~~g~d~iE~Dv~~TkDg~~Vv~HD~ 82 (292)
T 3mz2_A 47 ENSMETFENTLSYTPATFEIDPRLTKDSVIVLFHDD 82 (292)
T ss_dssp TTCHHHHHHHHHHCCCEEEECEEECTTCCEEECCSS
T ss_pred ccHHHHHHHHHHcCCCEEEEEEeECCCCcEEEECCc
Confidence 344457788889999999999997 57789999974
No 41
>3m91_B Prokaryotic ubiquitin-like protein PUP; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis}
Probab=20.37 E-value=61 Score=21.79 Aligned_cols=26 Identities=19% Similarity=0.349 Sum_probs=15.7
Q ss_pred cHHHHHHHHHHHHhcCCCcEEEEEee
Q 043880 152 PAIDTLKEIEAFMSSKPAEIVTLILE 177 (355)
Q Consensus 152 ~l~d~L~eI~~FL~~nP~EVV~l~l~ 177 (355)
.+.++|.||-.-|+.|..|+|-=+++
T Consensus 15 ~~D~lLDeId~vLE~NAeeFV~~fVQ 40 (44)
T 3m91_B 15 ETDDLLDEIDDVLEENAEDFVRAYVQ 40 (44)
T ss_dssp HHHHHHHHHHHHHHHTC---------
T ss_pred hHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 56889999999999999999865554
Done!