Query 043883
Match_columns 348
No_of_seqs 276 out of 1825
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 15:52:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043883.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043883hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tnx_A Papain; hydrolase, cyto 100.0 1.4E-81 4.7E-86 602.3 34.6 297 24-334 56-362 (363)
2 3qj3_A Cathepsin L-like protei 100.0 4.4E-79 1.5E-83 581.3 32.4 297 25-332 13-330 (331)
3 3qt4_A Cathepsin-L-like midgut 100.0 3.1E-79 1.1E-83 581.1 30.2 298 26-332 19-328 (329)
4 1pci_A Procaricain; zymogen, h 100.0 5.3E-79 1.8E-83 579.0 31.5 297 26-332 14-320 (322)
5 2c0y_A Procathepsin S; proenzy 100.0 1.1E-78 3.8E-83 575.5 29.7 297 26-332 4-314 (315)
6 1cs8_A Human procathepsin L; p 100.0 4.3E-78 1.5E-82 571.7 30.3 292 29-332 7-315 (316)
7 1by8_A Protein (procathepsin K 100.0 5.3E-78 1.8E-82 570.6 29.9 294 28-332 5-313 (314)
8 2o6x_A Procathepsin L1, secret 100.0 4.1E-77 1.4E-81 563.5 29.7 291 32-333 3-306 (310)
9 1xkg_A DER P I, major mite fec 100.0 1.3E-71 4.5E-76 525.5 26.4 274 33-332 7-301 (312)
10 3pdf_A Cathepsin C, dipeptidyl 100.0 1.2E-66 4E-71 511.0 24.7 271 49-332 135-434 (441)
11 3hhi_A Cathepsin B-like cystei 100.0 3.3E-65 1.1E-69 484.7 19.4 268 52-333 2-312 (325)
12 3p5u_A Actinidin; SAD, cystein 100.0 4.5E-61 1.5E-65 433.8 23.4 207 123-332 1-216 (220)
13 1s4v_A Cysteine endopeptidase; 100.0 5.5E-61 1.9E-65 435.6 24.1 216 122-340 1-225 (229)
14 3pbh_A Procathepsin B; thiol p 100.0 2.1E-61 7.3E-66 457.5 22.2 255 61-332 11-313 (317)
15 2fo5_A Cysteine proteinase EP- 100.0 2.9E-61 1E-65 444.6 22.2 215 122-339 3-229 (262)
16 1cqd_A Protein (protease II); 100.0 1.3E-60 4.3E-65 431.1 24.3 206 122-332 2-216 (221)
17 1ppo_A Protease omega; hydrola 100.0 2E-60 7E-65 428.3 23.5 205 123-332 1-214 (216)
18 1iwd_A Ervatamin B; cysteine p 100.0 4.7E-60 1.6E-64 425.5 23.9 204 123-332 1-213 (215)
19 1yal_A Chymopapain; hydrolase, 100.0 4.8E-60 1.6E-64 426.4 23.8 205 123-332 1-214 (218)
20 3u8e_A Papain-like cysteine pr 100.0 8.9E-60 3.1E-64 425.9 22.9 204 123-332 1-218 (222)
21 2cio_A Papain; hydrolase/inhib 100.0 2.7E-59 9.1E-64 419.8 23.4 201 123-332 1-210 (212)
22 2xu3_A Cathepsin L1; hydrolase 100.0 3.1E-59 1E-63 421.8 23.0 204 123-332 1-219 (220)
23 3ioq_A CMS1MS2; caricaceae, cy 100.0 3.6E-59 1.2E-63 419.3 22.2 201 123-332 1-210 (213)
24 2b1m_A SPE31; papain-like, sug 100.0 6.5E-59 2.2E-63 426.1 24.3 207 122-333 1-224 (246)
25 3ovx_A Cathepsin S; hydrolase, 100.0 3.2E-59 1.1E-63 421.1 21.2 204 123-332 2-217 (218)
26 3kwz_A Cathepsin K; enzyme inh 100.0 5.5E-59 1.9E-63 418.8 22.3 202 123-332 1-214 (215)
27 2bdz_A Mexicain; cysteine prot 100.0 5.7E-59 1.9E-63 418.2 22.0 201 123-332 1-210 (214)
28 1o0e_A Ervatamin C; plant cyst 100.0 9.2E-59 3.2E-63 415.1 22.9 197 123-332 1-206 (208)
29 8pch_A Cathepsin H; hydrolase, 100.0 4.9E-59 1.7E-63 420.5 21.1 204 123-333 1-218 (220)
30 2oul_A Falcipain 2; cysteine p 100.0 8.3E-59 2.8E-63 424.4 22.4 206 121-332 16-239 (241)
31 3f75_A Toxopain-2, cathepsin L 100.0 5.5E-59 1.9E-63 421.3 19.9 209 121-332 5-223 (224)
32 1m6d_A Cathepsin F, catsf; pap 100.0 1.6E-58 5.3E-63 415.5 22.0 200 123-332 1-212 (214)
33 3bwk_A Cysteine protease falci 100.0 1.3E-58 4.5E-63 423.5 21.7 206 121-332 18-241 (243)
34 3i06_A Cruzipain; autocatalyti 100.0 4.7E-58 1.6E-62 412.6 22.9 201 123-332 1-213 (215)
35 3f5v_A DER P 1 allergen; aller 100.0 3E-57 1E-61 409.4 19.5 200 121-332 8-221 (222)
36 3cbj_A Cathepsin B; cathepsin 100.0 3.8E-54 1.3E-58 399.1 19.9 206 121-334 5-258 (266)
37 1deu_A Procathepsin X; cystein 100.0 8.9E-54 3.1E-58 398.4 21.5 205 121-333 34-275 (277)
38 3qsd_A Cathepsin B-like peptid 100.0 2.5E-53 8.4E-58 391.2 19.9 202 122-332 2-252 (254)
39 2wbf_X Serine-repeat antigen p 100.0 7.5E-49 2.6E-53 363.5 20.6 205 125-332 9-257 (265)
40 3ois_A Cysteine protease; alph 100.0 7.7E-46 2.6E-50 347.5 14.2 228 77-315 13-273 (291)
41 2cb5_A Protein (bleomycin hydr 100.0 1.1E-35 3.7E-40 290.1 17.4 204 122-334 47-424 (453)
42 2e01_A Cysteine proteinase 1; 100.0 1.6E-34 5.6E-39 282.1 18.5 204 122-334 52-425 (457)
43 3pw3_A Aminopeptidase C; bleom 100.0 5E-29 1.7E-33 238.4 18.4 179 134-314 21-356 (383)
44 3f75_P Toxopain-2, cathepsin L 99.8 4.2E-19 1.4E-23 140.2 9.7 75 26-103 17-91 (106)
45 2l95_A Crammer, LP06209P; cyst 99.7 1.8E-18 6E-23 130.5 6.4 69 31-101 7-76 (80)
46 1pxv_A Cysteine protease; hydr 96.0 0.14 4.9E-06 43.0 12.6 118 143-314 32-162 (183)
47 1cv8_A Staphopain; cysteine pr 95.7 0.32 1.1E-05 40.7 13.7 109 143-300 23-144 (174)
48 1x9y_A Cysteine proteinase; ha 95.4 0.3 1E-05 45.4 13.6 118 143-314 208-338 (367)
49 3erv_A Putative C39-like pepti 90.5 1 3.5E-05 39.9 8.6 62 230-299 125-196 (236)
50 3bb7_A Interpain A; cysteine p 48.1 36 0.0012 31.3 6.7 59 238-313 239-298 (321)
51 1dki_A Pyrogenic exotoxin B zy 47.8 30 0.001 32.5 6.2 54 238-313 290-344 (371)
52 4d8b_A Streptopain; papain fol 43.4 30 0.001 30.8 5.2 54 238-313 172-226 (261)
No 1
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya}
Probab=100.00 E-value=1.4e-81 Score=602.27 Aligned_cols=297 Identities=40% Similarity=0.714 Sum_probs=260.1
Q ss_pred CCChhhHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEcccCCCCCHHHHHHhhcCcCCC
Q 043883 24 TFDEGSIAEKFEQWKAQYGRTYKESAENSKRFEIFKDNLVAVERFNNAAIGNRSYTLRLNKFADLTPQEFIASQTGFKMS 103 (348)
Q Consensus 24 ~~~~~~~~~~f~~f~~~~~k~Y~s~~E~~~R~~iF~~n~~~I~~~N~~~~~~~s~~~g~N~FsD~t~eEf~~~~~~~~~~ 103 (348)
..+++.+.++|++||.+|+|.|.+.+|+.+|+.||++|+++|++||++ +.+|++|+|+|+|||.|||++++++....
T Consensus 56 l~s~~~~~~lf~~f~~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~---~~sy~~g~N~FaDlT~eEf~~~~~~~~~~ 132 (363)
T 3tnx_A 56 LTSTERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKK---NNSYWLGLNVFADMSNDEFKEKYTGSIAG 132 (363)
T ss_dssp SSCHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHTTS---CCSEEECSCTTTTSCHHHHHHHHSCSSCS
T ss_pred hcCHHHHHHHHHHHHHHcCCcCCCHHHHHHHHHHHHHHHHHHHHHHcC---CCCeEEeccccccCCHHHHHHHhcccccc
Confidence 345678889999999999999999999999999999999999999997 68999999999999999999998875543
Q ss_pred CCcccccCCCCccccC-CCCCCCceecccCCCCCcccccccc-------HHHHHHHHHHHHcCCCcCCCHHHHHhhcCCC
Q 043883 104 DHSSSLKANGTPFLYK-SSQVPPSVNWIEKGAVTPVKYQGQC-------AVAAVEGINAIKINRLVSLSEQQLVDCATND 175 (348)
Q Consensus 104 ~~~~~~~~~~~~~~~~-~~~lP~~~Dwr~~g~v~pv~dQg~C-------a~~~~e~~~~i~~~~~~~lS~q~l~dC~~~~ 175 (348)
......... ...... ..+||++||||++|.|+||||||.| +++++|++++|++++++.||+|+|+||+..
T Consensus 133 ~~~~~~~~~-~~~~~~~~~~lP~s~DWR~~g~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~LSeQ~LvdC~~~- 210 (363)
T 3tnx_A 133 NYTTTELSY-EEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSAWAFSAVSTIESIIKIRTGNLNEYSEQELLDCDRR- 210 (363)
T ss_dssp CCCCSSSSS-SCCCCCSCCCCCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT-
T ss_pred ccccccccc-ccccCcccCCCCcceecccCCCCCCCccCCcCCchhhhhhcccHHHHHHHHcCCCCCcCHHHHhcccCC-
Confidence 321111010 111111 2679999999999999999999977 788999999999999999999999999874
Q ss_pred CCCCCCCCchhHHHHHHHHcCCCCCCCcccccCCcCCCCCCcccCCccEEEeeeEecCCCCHHHHHHHHHcCCeEEEEec
Q 043883 176 NNNGCYGGFMDDAFKYIIQNKGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVANQPVSVAIDA 255 (348)
Q Consensus 176 ~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~GPV~v~i~~ 255 (348)
+.||+||++..|++|+.+. ||++|++|||.+. .+.|..........++.++..++..++.+++.+|++|||+|+|++
T Consensus 211 -~~GC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~-~~~c~~~~~~~~~~~~~~~~~~~~~~e~~l~~~v~~gPvsvai~a 287 (363)
T 3tnx_A 211 -SYGCNGGYPWSALQLVAQY-GIHYRNTYPYEGV-QRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEA 287 (363)
T ss_dssp -SCTTBCCCHHHHHHHHHHT-CBCBTTTSCCCSS-CCCCCGGGGCSCSBCCCEEEEECSSCHHHHHHHHTTSCEEEEECC
T ss_pred -CCCCCCCChHHHHhHHHhc-CccccccCCCcCc-CCCcccCCCCCceeeccceEEcchhhHHHHHHHHHcCCcEEEEEe
Confidence 7899999999999999876 9999999999998 777765544455677888888888899999999999999999997
Q ss_pred C--ccccccCceEcCCCCCCCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccceeee
Q 043883 256 S--ALQFYSGGVFNGYCETFLNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPVS 333 (348)
Q Consensus 256 ~--~f~~Y~~Giy~~~c~~~~~Hav~iVGyg~~~~g~~yWiikNSWG~~WGe~GY~~i~~~~~~~~~~Cgi~~~~~~p~~ 333 (348)
. +|++|++|||..+|+..+||||+|||||++ |||||||||++|||+|||||+||.++..|+|||++.++||+
T Consensus 288 ~~~~F~~Y~sGVy~~~~~~~lnHaV~iVGyG~~-----YWIVKNSWGt~WGe~GY~rI~Rg~~~~~~~CGI~~~a~yPi- 361 (363)
T 3tnx_A 288 AGKDFQLYRGGIFVGPCGNKVDHAVAAVGYGPN-----YILIRNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPV- 361 (363)
T ss_dssp CSHHHHTEEEEEECCCCCSCCCEEEEEEEEETT-----EEEEECSBCTTSTBTTEEEEECCSCCSSCGGGTTSCEEEEE-
T ss_pred cchhhhCCCCCEECCCCCCCCCeEEEEEEcCCC-----cEEEEeCCCCccccCcEEEEEcCCCCCCCcCCccceeeecc-
Confidence 6 899999999999999899999999999974 99999999999999999999999987678999999999999
Q ss_pred c
Q 043883 334 K 334 (348)
Q Consensus 334 ~ 334 (348)
+
T Consensus 362 k 362 (363)
T 3tnx_A 362 K 362 (363)
T ss_dssp C
T ss_pred c
Confidence 5
No 2
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0
Probab=100.00 E-value=4.4e-79 Score=581.32 Aligned_cols=297 Identities=42% Similarity=0.743 Sum_probs=261.1
Q ss_pred CChhhHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhcccc-cCCCcEEEEcccCCCCCHHHHHHhhcCcCCC
Q 043883 25 FDEGSIAEKFEQWKAQYGRTYKESAENSKRFEIFKDNLVAVERFNNAA-IGNRSYTLRLNKFADLTPQEFIASQTGFKMS 103 (348)
Q Consensus 25 ~~~~~~~~~f~~f~~~~~k~Y~s~~E~~~R~~iF~~n~~~I~~~N~~~-~~~~s~~~g~N~FsD~t~eEf~~~~~~~~~~ 103 (348)
+.+..+...|++||++|+|.|.+.+|+.+|+.||++|+++|++||+++ .++.+|++|+|+|+|||.|||++++++.+..
T Consensus 13 ~~~~~l~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~~~~~~~~~ 92 (331)
T 3qj3_A 13 LPSTFVAEKWENFKTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQGLVSYTLGVNLFTDMTPEEMKAYTHGLIMP 92 (331)
T ss_dssp CCHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSEEECCSTTTTCCHHHHHHHHSCCCCC
T ss_pred CCCHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCceeecccccccCCHHHHHHHhcccccc
Confidence 467788999999999999999988999999999999999999999864 3578999999999999999999988876543
Q ss_pred CCcccccCCCCcccc-------CCCCCCCceecccCCCCCcccccccc-------HHHHHHHHHHHHcCC--CcCCCHHH
Q 043883 104 DHSSSLKANGTPFLY-------KSSQVPPSVNWIEKGAVTPVKYQGQC-------AVAAVEGINAIKINR--LVSLSEQQ 167 (348)
Q Consensus 104 ~~~~~~~~~~~~~~~-------~~~~lP~~~Dwr~~g~v~pv~dQg~C-------a~~~~e~~~~i~~~~--~~~lS~q~ 167 (348)
.... .....+.. ...+||++||||++|+||||||||.| +++++|+++++++++ ++.||+|+
T Consensus 93 ~~~~---~~~~~~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~~~LSeQ~ 169 (331)
T 3qj3_A 93 ADLH---KNGIPIKTREDLGLNASVRYPASFDWRDQGMVSPVKNQGSCGSSWAFSSTGAIESQMKIANGAGYDSSVSEQQ 169 (331)
T ss_dssp SSTT---TTCEEECSGGGGTCCSSCCCCSSEEGGGGTCSCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCTTSCCCBCHHH
T ss_pred cccc---ccCcccccccccccccccCCCcceecccCCccCCCccCcccchhhHHHHHHHHHHHHHHHhCCCcccCcCHHH
Confidence 2110 00011111 11579999999999999999999877 788999999999998 89999999
Q ss_pred HHhhcCCCCCCCCCCCchhHHHHHHHHcCCCCCCCcccccCCcCCCCCCcccCCccEEEeeeEecCCCCHHHHHHHHH-c
Q 043883 168 LVDCATNDNNNGCYGGFMDDAFKYIIQNKGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVA-N 246 (348)
Q Consensus 168 l~dC~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~-~ 246 (348)
|+||+.. +.||+||++..|++|+.+++||++|++|||.+. .+.|... .....+++++|..++..++++||++|+ +
T Consensus 170 LvdC~~~--~~GC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~-~~~C~~~-~~~~~~~i~~~~~v~~~~e~~lk~al~~~ 245 (331)
T 3qj3_A 170 LVDCVPN--ALGCSGGWMNDAFTYVAQNGGIDSEGAYPYEMA-DGNCHYD-PNQVAARLSGYVYLSGPDENMLADMVATK 245 (331)
T ss_dssp HHHHCTT--SCGGGCCCHHHHHHHHHHHTCEEBTTTSCCCSS-CCCCCCC-TTSEEECCSEEEEESSCCHHHHHHHHHHH
T ss_pred HhhhccC--CCCCCCCCHHHHHHHHHHcCCcCcccccCccCC-CCCCCCC-cccceeEeeEEEEeCCCCHHHHHHHHHhC
Confidence 9999974 889999999999999998889999999999998 8899876 345668899999998789999999999 6
Q ss_pred CCeEEEEecC-ccccccCceEcCC-CC-CCCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCccc
Q 043883 247 QPVSVAIDAS-ALQFYSGGVFNGY-CE-TFLNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCG 323 (348)
Q Consensus 247 GPV~v~i~~~-~f~~Y~~Giy~~~-c~-~~~~Hav~iVGyg~~~~g~~yWiikNSWG~~WGe~GY~~i~~~~~~~~~~Cg 323 (348)
|||+|+|++. +|++|++|||..+ |+ ..++|||+|||||++ +|.+|||||||||++||++|||||+|+.+ |.||
T Consensus 246 GPV~v~i~a~~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~Cg 321 (331)
T 3qj3_A 246 GPVAVAFDADDPFGSYSGGVYYNPTCETNKFTHAVLIVGYGNE-NGQDYWLVKNSWGDGWGLDGYFKIARNAN---NHCG 321 (331)
T ss_dssp CCEEEEECCCTTGGGEEEEEECCTTCCSSCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSS---SGGG
T ss_pred CCEEEEEEcccccccccCceEeCCCCCCCcCCEEEEEEEEecc-CCceEEEEEcCCCCCcCCCCEEEEEcCCC---CccC
Confidence 9999999999 8999999999874 86 578999999999984 89999999999999999999999999963 5799
Q ss_pred cccccceee
Q 043883 324 IAMFASFPV 332 (348)
Q Consensus 324 i~~~~~~p~ 332 (348)
|++.++||+
T Consensus 322 I~~~~~~p~ 330 (331)
T 3qj3_A 322 IAGVASVPT 330 (331)
T ss_dssp TTTSCEEEE
T ss_pred cCCceeeee
Confidence 999999998
No 3
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor}
Probab=100.00 E-value=3.1e-79 Score=581.10 Aligned_cols=298 Identities=40% Similarity=0.750 Sum_probs=257.0
Q ss_pred ChhhHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhcccc-cCCCcEEEEcccCCCCCHHHHHHhhcCcCCCC
Q 043883 26 DEGSIAEKFEQWKAQYGRTYKESAENSKRFEIFKDNLVAVERFNNAA-IGNRSYTLRLNKFADLTPQEFIASQTGFKMSD 104 (348)
Q Consensus 26 ~~~~~~~~f~~f~~~~~k~Y~s~~E~~~R~~iF~~n~~~I~~~N~~~-~~~~s~~~g~N~FsD~t~eEf~~~~~~~~~~~ 104 (348)
++..+...|++||++|+|.|.+.+|+.+|+.||++|+++|++||+++ .++.+|++|+|+|+|||.|||++ +++.++..
T Consensus 19 ~~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~-~~g~~~~~ 97 (329)
T 3qt4_A 19 PKSLFQEQWSQFKLTHKKSYSSPIEEIRRQLIFKDNVAKIAEHNAKFEKGEVTYSKAMNQFGDMSKEEFLA-YVNRGKAQ 97 (329)
T ss_dssp -CCHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSEEECCCGGGGCCHHHHHH-HHHHTCCC
T ss_pred CHHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCeEEeccccccCCHHHHHH-hcCCcccc
Confidence 45678889999999999999988899999999999999999999864 25689999999999999999998 77654321
Q ss_pred CcccccCCCCccccCCCCCCCceecccCCCCCcccccccc-------HHHHHHHHHHHHcCCCcCCCHHHHHhhcCCCCC
Q 043883 105 HSSSLKANGTPFLYKSSQVPPSVNWIEKGAVTPVKYQGQC-------AVAAVEGINAIKINRLVSLSEQQLVDCATNDNN 177 (348)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pv~dQg~C-------a~~~~e~~~~i~~~~~~~lS~q~l~dC~~~~~~ 177 (348)
...........+.....+||++||||++ +||||||||.| +++++|+++++++++++.||||+|+||+..+++
T Consensus 98 ~~~~~~~~~~~~~~~~~~lP~~~DwR~~-~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~LvdC~~~~g~ 176 (329)
T 3qt4_A 98 KPKHPENLRMPYVSSKKPLAASVDWRSN-AVSEVKDQGQCGSSWSFSTTGAVEGQLALQRGRLTSLSEQNLIDCSSSYGN 176 (329)
T ss_dssp ------CCEEECCCCCSCCCSCEECTTT-SCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTC
T ss_pred cccccccccccccCCccCCCCCEEcccc-ccCCCccCCCCcChHHHHHHHHHHHHHHHHcCCcccCCHHHHHHhccccCC
Confidence 1100000001111111479999999999 99999999876 788999999999999999999999999975568
Q ss_pred CCCCCCchhHHHHHHHHcCCCCCCCcccccCCcCCCCCCcccCCccEEEeeeEecCCCCHHHHHHHHH-cCCeEEEEecC
Q 043883 178 NGCYGGFMDDAFKYIIQNKGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVA-NQPVSVAIDAS 256 (348)
Q Consensus 178 ~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~-~GPV~v~i~~~ 256 (348)
.||+||++..|++|+.++ ||++|++|||.+. .+.|... .....+++++|..++..++++||++|+ +|||+|+|+++
T Consensus 177 ~GC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~-~~~C~~~-~~~~~~~i~~~~~v~~~~e~~lk~al~~~GPV~v~i~a~ 253 (329)
T 3qt4_A 177 AGCDGGWMDSAFSYIHDY-GIMSESAYPYEAQ-GDYCRFD-SSQSVTTLSGYYDLPSGDENSLADAVGQAGPVAVAIDAT 253 (329)
T ss_dssp CTTBCCCHHHHHHHHHHS-CBCBTTTSCCCSS-CCCCCCC-GGGCCBCCSEEEECCTTCHHHHHHHHHHTCCEEEEECCC
T ss_pred CCCCCCChhHHHHHHHHc-CCCcHHHeeeecC-CCCCCCC-cccceEEeceEEEecCCCHHHHHHHHHhCCCEEEEEecC
Confidence 899999999999999998 9999999999998 8899876 344567899999998889999999999 69999999999
Q ss_pred -ccccccCceEcC-CCC-CCCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccceee
Q 043883 257 -ALQFYSGGVFNG-YCE-TFLNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPV 332 (348)
Q Consensus 257 -~f~~Y~~Giy~~-~c~-~~~~Hav~iVGyg~~~~g~~yWiikNSWG~~WGe~GY~~i~~~~~~~~~~Cgi~~~~~~p~ 332 (348)
+|++|++|||.. .|+ ..++|||+|||||++ +|.+|||||||||++||++|||||+|+.+ |.|||++.++||+
T Consensus 254 ~~f~~Y~~GVy~~~~c~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~CgI~~~~~yp~ 328 (329)
T 3qt4_A 254 DELQFYSGGLFYDQTCNQSDLNHGVLVVGYGSD-NGQDYWILKNSWGSGWGESGYWRQVRNYG---NNCGIATAASYPA 328 (329)
T ss_dssp GGGTTEEEEEECCSSCCSSCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEESSSS---SGGGTTTTCEEEE
T ss_pred hhhhhccCceeecCCCCCCcCCEEEEEEEEEee-CCccEEEEEeCCCCcccCCcEEEEEeCCC---CccCCCCceeEee
Confidence 999999999987 486 578999999999985 79999999999999999999999999963 5799999999998
No 4
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1
Probab=100.00 E-value=5.3e-79 Score=579.02 Aligned_cols=297 Identities=41% Similarity=0.756 Sum_probs=259.8
Q ss_pred ChhhHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEcccCCCCCHHHHHHhhcCcCCCCC
Q 043883 26 DEGSIAEKFEQWKAQYGRTYKESAENSKRFEIFKDNLVAVERFNNAAIGNRSYTLRLNKFADLTPQEFIASQTGFKMSDH 105 (348)
Q Consensus 26 ~~~~~~~~f~~f~~~~~k~Y~s~~E~~~R~~iF~~n~~~I~~~N~~~~~~~s~~~g~N~FsD~t~eEf~~~~~~~~~~~~ 105 (348)
++.++..+|++||++|+|.|.+.+|+.+|+.||.+|+++|++||++ +.+|++|+|+|+|||.+||++++++......
T Consensus 14 ~e~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~---~~~~~~g~N~FaDlt~eEf~~~~~g~~~~~~ 90 (322)
T 1pci_A 14 STERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKK---NNSYWLGLNEFADLSNDEFNEKYVGSLIDAT 90 (322)
T ss_dssp HHHHHHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHHHHHTT---CCSEEECSCTTTTSCHHHHHHHHCCCBCCCS
T ss_pred chHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhhcc---CCceEEecCccccCCHHHHHHHhcCCCCccc
Confidence 4567788999999999999998999999999999999999999987 5799999999999999999998877543322
Q ss_pred cccccCCCCccccCC-CCCCCceecccCCCCCcccccccc-------HHHHHHHHHHHHcCCCcCCCHHHHHhhcCCCCC
Q 043883 106 SSSLKANGTPFLYKS-SQVPPSVNWIEKGAVTPVKYQGQC-------AVAAVEGINAIKINRLVSLSEQQLVDCATNDNN 177 (348)
Q Consensus 106 ~~~~~~~~~~~~~~~-~~lP~~~Dwr~~g~v~pv~dQg~C-------a~~~~e~~~~i~~~~~~~lS~q~l~dC~~~~~~ 177 (348)
... .....+.... .+||++||||++|+|+||||||.| +++++|++++|++++++.||+|+|+||+. ++
T Consensus 91 ~~~--~~~~~~~~~~~~~lP~~~DwR~~g~vt~VkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~lSeq~lvdC~~--~~ 166 (322)
T 1pci_A 91 IEQ--SYDEEFINEDIVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER--RS 166 (322)
T ss_dssp SCC--CCSEECCCCCCCCSCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHSCT--TS
T ss_pred ccc--ccccccccccccCCCCeEecccCCCCCCccccccCCccHHHHHHHHHHHHHHHHcCCccccCHHHHHhhcC--CC
Confidence 100 0001121122 579999999999999999999877 78889999999999999999999999986 58
Q ss_pred CCCCCCchhHHHHHHHHcCCCCCCCcccccCCcCCCCCCcccCCccEEEeeeEecCCCCHHHHHHHHHcCCeEEEEecC-
Q 043883 178 NGCYGGFMDDAFKYIIQNKGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVANQPVSVAIDAS- 256 (348)
Q Consensus 178 ~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~GPV~v~i~~~- 256 (348)
.||+||++..|++|+.++ ||++|++|||.+. .+.|.........++|.+|..|+..++++||++|++|||+|+|+++
T Consensus 167 ~gC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~-~~~C~~~~~~~~~~~i~~~~~v~~~~e~~l~~~l~~GPV~v~i~~~~ 244 (322)
T 1pci_A 167 HGCKGGYPPYALEYVAKN-GIHLRSKYPYKAK-QGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKG 244 (322)
T ss_dssp CGGGCBCHHHHHHHHHHH-CBCBTTTSCCCSS-CCCCTTTTCCSCCBCCCCEEECCSSBHHHHHHHHHHSCEEEEECTTC
T ss_pred CCCCCCCHHHHHHHHHHh-CCCchhhCCCCCC-CCCCCCCCCCCceEEEeeEEEeCCCcHHHHHHHHHHCCEEEEEeccc
Confidence 999999999999999987 8999999999998 8899875333356789999999877899999999999999999996
Q ss_pred -ccccccCceEcCCCCCCCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccceee
Q 043883 257 -ALQFYSGGVFNGYCETFLNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPV 332 (348)
Q Consensus 257 -~f~~Y~~Giy~~~c~~~~~Hav~iVGyg~~~~g~~yWiikNSWG~~WGe~GY~~i~~~~~~~~~~Cgi~~~~~~p~ 332 (348)
+|++|++|||..+|+..++|||+|||||++ +|.+|||||||||++|||+|||||+|+.+.+.|.|||++.++||+
T Consensus 245 ~~f~~Y~~Gvy~~~c~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~n~CgI~~~~~yp~ 320 (322)
T 1pci_A 245 RPFQLYKGGIFEGPCGTKVDGAVTAVGYGKS-GGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPT 320 (322)
T ss_dssp HHHHTEEEEEECCSCCSCCCEEEEEEEEEEE-TTEEEEEEECSBCSSSTBTTEEEEECCCSBSSCGGGGGGCCEEEC
T ss_pred ccccccCCeEeCCCCCCCCCEEEEEEEEecc-CCccEEEEEeCCCCcccCCeEEEEEcCCCCCCCcCCcccceeEEE
Confidence 899999999998898889999999999985 799999999999999999999999999744447899999999998
No 5
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens}
Probab=100.00 E-value=1.1e-78 Score=575.52 Aligned_cols=297 Identities=41% Similarity=0.773 Sum_probs=257.0
Q ss_pred ChhhHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhcccc-cCCCcEEEEcccCCCCCHHHHHHhhcCcCCCC
Q 043883 26 DEGSIAEKFEQWKAQYGRTYKESAENSKRFEIFKDNLVAVERFNNAA-IGNRSYTLRLNKFADLTPQEFIASQTGFKMSD 104 (348)
Q Consensus 26 ~~~~~~~~f~~f~~~~~k~Y~s~~E~~~R~~iF~~n~~~I~~~N~~~-~~~~s~~~g~N~FsD~t~eEf~~~~~~~~~~~ 104 (348)
.+.++..+|++||++|+|.|.+.+|+.+|+.||++|+++|++||+++ .+..+|++|+|+|+|||.|||++.+++.+...
T Consensus 4 ~~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~s~~~g~N~FaDlt~eEf~~~~~g~~~~~ 83 (315)
T 2c0y_A 4 KDPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPS 83 (315)
T ss_dssp CCGGGHHHHHHHHHHHTCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCGGGGCCHHHHHHHTTSBCCCC
T ss_pred chHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEeccCccccCCHHHHHHHhcCCCCCc
Confidence 34467789999999999999888899999999999999999999863 24579999999999999999988887754322
Q ss_pred CcccccCCCCccccC-CCCCCCceecccCCCCCcccccccc-------HHHHHHHHHHHHcCCCcCCCHHHHHhhc-CCC
Q 043883 105 HSSSLKANGTPFLYK-SSQVPPSVNWIEKGAVTPVKYQGQC-------AVAAVEGINAIKINRLVSLSEQQLVDCA-TND 175 (348)
Q Consensus 105 ~~~~~~~~~~~~~~~-~~~lP~~~Dwr~~g~v~pv~dQg~C-------a~~~~e~~~~i~~~~~~~lS~q~l~dC~-~~~ 175 (348)
... ....+... ..+||++||||++|+|+||||||.| +++++|++++|++|+++.||+|+|+||+ ..+
T Consensus 84 ~~~----~~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAfs~~~alE~~~~i~~g~~~~LSeq~lvdC~~~~~ 159 (315)
T 2c0y_A 84 QWQ----RNITYKSNPNRILPDSVDWREKGCVTEVKYQGSCGAAWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKY 159 (315)
T ss_dssp GGG----SCBCC------CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGG
T ss_pred ccc----CCccccCcccCCCCCeEecCCCCCcCCCcCcccCCCcHHHHHHHHHHHHHHHHhCCCcCcCHHHHHhhccccc
Confidence 110 11111111 1469999999999999999999876 7888999999999999999999999998 544
Q ss_pred CCCCCCCCchhHHHHHHHHcCCCCCCCcccccCCcCCCCCCcccCCccEEEeeeEecCCCCHHHHHHHHH-cCCeEEEEe
Q 043883 176 NNNGCYGGFMDDAFKYIIQNKGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVA-NQPVSVAID 254 (348)
Q Consensus 176 ~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~-~GPV~v~i~ 254 (348)
++.||+||++..|++|+.+++||++|++|||.+. .+.|.... ....+++++|..|+..++++||++|+ +|||+|+|+
T Consensus 160 ~~~gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~-~~~C~~~~-~~~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~i~ 237 (315)
T 2c0y_A 160 GNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAM-DQKCQYDS-KYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVD 237 (315)
T ss_dssp TCCGGGCBCHHHHHHHHHHHTCEEBTTTSCCCSS-CCCCCCCG-GGEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEEC
T ss_pred CCCCCCCCCHHHHHHHHHHhCCcCchhcCCCccC-CCCcccCC-cccccccCCeEEeCCCCHHHHHHHHHHcCCEEEEEe
Confidence 6899999999999999987679999999999998 88998653 33567899999998779999999999 699999999
Q ss_pred cC--ccccccCceEcCC-CCCCCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCcccccccccee
Q 043883 255 AS--ALQFYSGGVFNGY-CETFLNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFP 331 (348)
Q Consensus 255 ~~--~f~~Y~~Giy~~~-c~~~~~Hav~iVGyg~~~~g~~yWiikNSWG~~WGe~GY~~i~~~~~~~~~~Cgi~~~~~~p 331 (348)
++ +|++|++|||..+ |+..++|||+|||||++ +|.+|||||||||++||++|||||+|+.+ |.|||++.++||
T Consensus 238 ~~~~~f~~Y~~Gvy~~~~c~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~CgI~~~~~~p 313 (315)
T 2c0y_A 238 ARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDL-NGKEYWLVKNSWGHNFGEEGYIRMARNKG---NHCGIASFPSYP 313 (315)
T ss_dssp CCSHHHHTEEEEEECCTTCCSCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSCEEE
T ss_pred cCchhhhccCCCcccCCCCCCcCCEEEEEEEEeec-CCCcEEEEEcCCCCCcCCCcEEEEEcCCC---CccCcCceeEEe
Confidence 97 8999999999886 98888999999999986 89999999999999999999999999852 579999999999
Q ss_pred e
Q 043883 332 V 332 (348)
Q Consensus 332 ~ 332 (348)
+
T Consensus 314 ~ 314 (315)
T 2c0y_A 314 E 314 (315)
T ss_dssp E
T ss_pred e
Confidence 7
No 6
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A*
Probab=100.00 E-value=4.3e-78 Score=571.72 Aligned_cols=292 Identities=41% Similarity=0.762 Sum_probs=253.9
Q ss_pred hHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhcccc-cCCCcEEEEcccCCCCCHHHHHHhhcCcCCCCCcc
Q 043883 29 SIAEKFEQWKAQYGRTYKESAENSKRFEIFKDNLVAVERFNNAA-IGNRSYTLRLNKFADLTPQEFIASQTGFKMSDHSS 107 (348)
Q Consensus 29 ~~~~~f~~f~~~~~k~Y~s~~E~~~R~~iF~~n~~~I~~~N~~~-~~~~s~~~g~N~FsD~t~eEf~~~~~~~~~~~~~~ 107 (348)
.+..+|++||++|+|.| +.+|+.+|+.||++|+++|++||+++ .++.+|++|+|+|+|||.+||++++++.++....
T Consensus 7 ~~~~~f~~~~~~~~k~Y-~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~~- 84 (316)
T 1cs8_A 7 SLEAQWTKWKAMHNRLY-GMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPR- 84 (316)
T ss_dssp GGHHHHHHHHHHTTCCC-CTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBCCCCCS-
T ss_pred HHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHHHHhhhccccCCcceEEccCccCCCCHHHHHHHhcCCCCCccc-
Confidence 47789999999999999 88899999999999999999999863 2467999999999999999999888775432211
Q ss_pred cccCCCCccccC-CCCCCCceecccCCCCCcccccccc-------HHHHHHHHHHHHcCCCcCCCHHHHHhhcCCCCCCC
Q 043883 108 SLKANGTPFLYK-SSQVPPSVNWIEKGAVTPVKYQGQC-------AVAAVEGINAIKINRLVSLSEQQLVDCATNDNNNG 179 (348)
Q Consensus 108 ~~~~~~~~~~~~-~~~lP~~~Dwr~~g~v~pv~dQg~C-------a~~~~e~~~~i~~~~~~~lS~q~l~dC~~~~~~~g 179 (348)
....+... ..+||++||||++|+|+||||||.| +++++|++++|++|+++.||+|+|+||+..+++.|
T Consensus 85 ----~~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~~~g~~g 160 (316)
T 1cs8_A 85 ----KGKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEG 160 (316)
T ss_dssp ----CCEECCCCTTCCCCSCEEGGGGTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCG
T ss_pred ----cCccccCccccCCCCcEecCCCCCcCCCCcccCCccHHHHHHHHHHHHHHHHHcCCCcCcCHHHHHHhccccCCCC
Confidence 00111111 1479999999999999999999876 78889999999999999999999999986545899
Q ss_pred CCCCchhHHHHHHHHcCCCCCCCcccccCCcCCCCCCcccCCccEEEeeeEecCCCCHHHHHHHHH-cCCeEEEEecC--
Q 043883 180 CYGGFMDDAFKYIIQNKGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVA-NQPVSVAIDAS-- 256 (348)
Q Consensus 180 C~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~-~GPV~v~i~~~-- 256 (348)
|+||++..|++|+.+++||++|++|||.+. .+.|.... ....+++++|..|+. ++++||++|+ +|||+|+|++.
T Consensus 161 C~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~-~~~C~~~~-~~~~~~i~~~~~v~~-~~~~ik~~l~~~GPV~v~i~~~~~ 237 (316)
T 1cs8_A 161 CNGGLMDYAFQYVQDNGGLDSEESYPYEAT-EESCKYNP-KYSVANDAGFVDIPK-QEKALMKAVATVGPISVAIDAGHE 237 (316)
T ss_dssp GGCBCHHHHHHHHHHHTCEEBTTTSCCCSS-CCCCCCCG-GGEEECCCCEEECCS-CHHHHHHHHHHHCCEEEEECCCSH
T ss_pred CCCCCHHHHHHHHHHhCCcCchhccCCCCC-CCCcCCCC-ccceeEeccEEEeCC-CHHHHHHHHHhcCCEEEEEecCCh
Confidence 999999999999986679999999999998 88998752 345678999999986 8999999999 69999999997
Q ss_pred ccccccCceEcCC-CCC-CCCeEEEEEEee---ecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCcccccccccee
Q 043883 257 ALQFYSGGVFNGY-CET-FLNHGVTAVGYG---TSEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFP 331 (348)
Q Consensus 257 ~f~~Y~~Giy~~~-c~~-~~~Hav~iVGyg---~~~~g~~yWiikNSWG~~WGe~GY~~i~~~~~~~~~~Cgi~~~~~~p 331 (348)
+|++|++|||..+ |+. .++|||+||||| ++++|.+|||||||||++||++|||||+|+.+ |.|||++.++||
T Consensus 238 ~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGygd~~~~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~CgI~~~~~~p 314 (316)
T 1cs8_A 238 SFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRR---NHCGIASAASYP 314 (316)
T ss_dssp HHHTEEEEEECCTTCCSSCCCEEEEEEEEEEECCSSCCEEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSCEEE
T ss_pred hhccccCceECCCCCCCCCCCEEEEEEEecCCcccCCCCcEEEEEcCCCCCcccCCEEEEECCCC---CccCccceeeEe
Confidence 8999999999886 875 689999999999 54479999999999999999999999999863 579999999999
Q ss_pred e
Q 043883 332 V 332 (348)
Q Consensus 332 ~ 332 (348)
+
T Consensus 315 ~ 315 (316)
T 1cs8_A 315 T 315 (316)
T ss_dssp C
T ss_pred e
Confidence 7
No 7
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A
Probab=100.00 E-value=5.3e-78 Score=570.57 Aligned_cols=294 Identities=41% Similarity=0.743 Sum_probs=255.3
Q ss_pred hhHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhcccc-cCCCcEEEEcccCCCCCHHHHHHhhcCcCCCCCc
Q 043883 28 GSIAEKFEQWKAQYGRTYKESAENSKRFEIFKDNLVAVERFNNAA-IGNRSYTLRLNKFADLTPQEFIASQTGFKMSDHS 106 (348)
Q Consensus 28 ~~~~~~f~~f~~~~~k~Y~s~~E~~~R~~iF~~n~~~I~~~N~~~-~~~~s~~~g~N~FsD~t~eEf~~~~~~~~~~~~~ 106 (348)
.++..+|++||++|+|.|.+.+|+.+|+.||++|+++|++||+++ .+..+|++|+|+|+|||.+||++.+++.+.....
T Consensus 5 ~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~FaDlt~eEf~~~~~g~~~~~~~ 84 (314)
T 1by8_A 5 EILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLSH 84 (314)
T ss_dssp CTHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSEEECCCTTSSSCHHHHHHHSCCCCCCSCC
T ss_pred HHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEEcccccccCCHHHHHHHhccCCCCccc
Confidence 357789999999999999988999999999999999999999863 2457999999999999999999888775433221
Q ss_pred ccccCCCCccccC-CCC-CCCceecccCCCCCcccccccc-------HHHHHHHHHHHHcCCCcCCCHHHHHhhcCCCCC
Q 043883 107 SSLKANGTPFLYK-SSQ-VPPSVNWIEKGAVTPVKYQGQC-------AVAAVEGINAIKINRLVSLSEQQLVDCATNDNN 177 (348)
Q Consensus 107 ~~~~~~~~~~~~~-~~~-lP~~~Dwr~~g~v~pv~dQg~C-------a~~~~e~~~~i~~~~~~~lS~q~l~dC~~~~~~ 177 (348)
. .....+... ..+ ||++||||++|+|+||||||.| +++++|++++|++|+++.||+|+|+||+. ++
T Consensus 85 ~---~~~~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFs~~~alE~~~~i~~g~~~~LSeq~lvdC~~--~~ 159 (314)
T 1by8_A 85 S---RSNDTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--EN 159 (314)
T ss_dssp C---CSSSSSBCCCCSSCCCSCCBSTTTTCSCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHTTCT--TS
T ss_pred c---cCCccccccccccCCCCeEeCCCCCCCCCcccCCCCCCcHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcC--CC
Confidence 0 000112111 124 9999999999999999999876 78889999999999999999999999986 58
Q ss_pred CCCCCCchhHHHHHHHHcCCCCCCCcccccCCcCCCCCCcccCCccEEEeeeEecCCCCHHHHHHHHH-cCCeEEEEecC
Q 043883 178 NGCYGGFMDDAFKYIIQNKGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVA-NQPVSVAIDAS 256 (348)
Q Consensus 178 ~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~-~GPV~v~i~~~ 256 (348)
.||+||++..|++|+.+++||++|++|||.+. .+.|.... ....+++++|..|+..++++||++|+ +|||+|+|+++
T Consensus 160 ~gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~-~~~C~~~~-~~~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~i~~~ 237 (314)
T 1by8_A 160 DGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQ-EESCMYNP-TGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDAS 237 (314)
T ss_dssp CGGGCCCSHHHHHHHHHTTCBCBTTTSCCCSS-CCCCCCCG-GGCCBCCSCEEECCSSCHHHHHHHHHHHCCEEEEECCC
T ss_pred CCCcCCCHHHHHHHHHHcCCcCcHhhCCCCCC-CCCcCCCC-ccceeEECcEEEecCCCHHHHHHHHHHcCCEEEEEEeC
Confidence 99999999999999987679999999999998 88998653 33567899999998779999999999 69999999997
Q ss_pred --ccccccCceEcCC-CCC-CCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccceee
Q 043883 257 --ALQFYSGGVFNGY-CET-FLNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPV 332 (348)
Q Consensus 257 --~f~~Y~~Giy~~~-c~~-~~~Hav~iVGyg~~~~g~~yWiikNSWG~~WGe~GY~~i~~~~~~~~~~Cgi~~~~~~p~ 332 (348)
+|++|++|||..+ |+. .++|||+|||||++ +|.+|||||||||++|||+|||||+|+.+ |.|||++.++||+
T Consensus 238 ~~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~CgI~~~~~~p~ 313 (314)
T 1by8_A 238 LTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQ-KGNKHWIIKNSWGENWGNKGYILMARNKN---NACGIANLASFPK 313 (314)
T ss_dssp SHHHHTEEEECBCCTTCCSSCCCEEEEEEEEEEE-TTEEEEEEECSBTTTSTBTTEEEECCSSS---CGGGTTSSCEEEC
T ss_pred hHHhhhccCceecCCCCCCCCCCeEEEEEEEecc-CCceEEEEEcCCCCCcCcCCEEEEEcCCC---CcCCccCeeEEee
Confidence 8999999999886 876 68999999999985 89999999999999999999999999852 5799999999997
No 8
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica}
Probab=100.00 E-value=4.1e-77 Score=563.54 Aligned_cols=291 Identities=36% Similarity=0.712 Sum_probs=249.9
Q ss_pred HHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhcccc-cCCCcEEEEcccCCCCCHHHHHHhhcC-cCCCCCcccc
Q 043883 32 EKFEQWKAQYGRTYKESAENSKRFEIFKDNLVAVERFNNAA-IGNRSYTLRLNKFADLTPQEFIASQTG-FKMSDHSSSL 109 (348)
Q Consensus 32 ~~f~~f~~~~~k~Y~s~~E~~~R~~iF~~n~~~I~~~N~~~-~~~~s~~~g~N~FsD~t~eEf~~~~~~-~~~~~~~~~~ 109 (348)
.+|++||++|+|.|.+.+|+.+| .||++|+++|++||+++ .++.+|++|+|+|+|||.|||++++++ .+......
T Consensus 3 ~~f~~~~~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~~~~-- 79 (310)
T 2o6x_A 3 DLWHQWKRMYNKEYNGADDQHRR-NIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYLTEMSRASDIL-- 79 (310)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHTTSSSEEECCCTTTTSCHHHHHHHHCCCCCCGGGGS--
T ss_pred HHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHhhhccCCCcEEEeccccCCCCHHHHHHHhcCCCCCccccc--
Confidence 57999999999999888899999 99999999999999863 246799999999999999999987776 43321110
Q ss_pred cCCCCccccCCCCCCCceecccCCCCCcccccccc-------HHHHHHHHHHHHcCCCcCCCHHHHHhhcCCCCCCCCCC
Q 043883 110 KANGTPFLYKSSQVPPSVNWIEKGAVTPVKYQGQC-------AVAAVEGINAIKINRLVSLSEQQLVDCATNDNNNGCYG 182 (348)
Q Consensus 110 ~~~~~~~~~~~~~lP~~~Dwr~~g~v~pv~dQg~C-------a~~~~e~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~G 182 (348)
.....+.....+||++||||++|+|+||||||.| +++++|++++|++++++.||+|+|+||+..+++.||+|
T Consensus 80 -~~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAfa~~~alE~~~~i~~g~~~~LS~q~lvdC~~~~~~~gC~G 158 (310)
T 2o6x_A 80 -SHGVPYEANNRAVPDKIDWRESGYVTEVKDQGNCGSGWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSRPWGNNGCGG 158 (310)
T ss_dssp -CSSEECCC----CCSCEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSSCCCBCHHHHHHHCGGGTCCGGGC
T ss_pred -ccCCccccccCCCCCeEecCcCCCCCCcccCCCCCccHHHHhHHHHHHHHHHHhCCCcCcCHHHHHHhhhccCCCCCCC
Confidence 0001111111369999999999999999999876 78889999999999999999999999986445899999
Q ss_pred CchhHHHHHHHHcCCCCCCCcccccCCcCCCCCCcccCCccEEEeeeEecCCCCHHHHHHHHH-cCCeEEEEecC-cccc
Q 043883 183 GFMDDAFKYIIQNKGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVA-NQPVSVAIDAS-ALQF 260 (348)
Q Consensus 183 G~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~-~GPV~v~i~~~-~f~~ 260 (348)
|++..|++|+. ++||++|++|||.+. .+.|.... ....+++++|..|+..++++||++|+ +|||+|+|+++ +|++
T Consensus 159 G~~~~a~~yi~-~~Gi~~e~~yPY~~~-~~~C~~~~-~~~~~~i~~~~~v~~~~~~~i~~~l~~~GPV~v~i~~~~~f~~ 235 (310)
T 2o6x_A 159 GLMENAYQYLK-QFGLETESSYPYTAV-EGQCRYNK-QLGVAKVTGFYTVHSGSEVELKNLVGAEGPAAVAVDVESDFMM 235 (310)
T ss_dssp CCHHHHHHHHT-TSCBCBTTTSCCCSS-CCCCCCCG-GGCCEEEEEEEEECSCCHHHHHHHHHHHCCEEEEECCCHHHHT
T ss_pred CCHHHHHHHHH-HCCcCchhcCCCCCC-CCCccCCC-CCCceEeCeEEEeCCCCHHHHHHHHHhcCCeEEEEecchhhhh
Confidence 99999999998 569999999999998 88998752 34568999999998779999999999 79999999999 9999
Q ss_pred ccCceEcC-CCCC-CCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccceeee
Q 043883 261 YSGGVFNG-YCET-FLNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPVS 333 (348)
Q Consensus 261 Y~~Giy~~-~c~~-~~~Hav~iVGyg~~~~g~~yWiikNSWG~~WGe~GY~~i~~~~~~~~~~Cgi~~~~~~p~~ 333 (348)
|++|||.. .|+. .++|||+|||||++ +|.+|||||||||++||++|||||+|+.+ |.|||++.++||++
T Consensus 236 Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~Cgi~~~~~~p~~ 306 (310)
T 2o6x_A 236 YRSGIYQSQTCSPLRVNHAVLAVGYGTQ-GGTDYWIVKNSWGLSWGERGYIRMVRNRG---NMCGIASLASLPMV 306 (310)
T ss_dssp EEEEEECCSSCCTTCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSEEEEEE
T ss_pred CCCceecCCCCCCCCCCEEEEEEEEecc-CCceEEEEEeCCCCccCCCcEEEEEcCCC---CcCCccceeeEEEe
Confidence 99999986 4874 78999999999985 89999999999999999999999999863 57999999999984
No 9
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1
Probab=100.00 E-value=1.3e-71 Score=525.52 Aligned_cols=274 Identities=26% Similarity=0.506 Sum_probs=236.2
Q ss_pred HHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEcccCCCCCHHHHHHhhcCcCCCCCcccccCC
Q 043883 33 KFEQWKAQYGRTYKESAENSKRFEIFKDNLVAVERFNNAAIGNRSYTLRLNKFADLTPQEFIASQTGFKMSDHSSSLKAN 112 (348)
Q Consensus 33 ~f~~f~~~~~k~Y~s~~E~~~R~~iF~~n~~~I~~~N~~~~~~~s~~~g~N~FsD~t~eEf~~~~~~~~~~~~~~~~~~~ 112 (348)
+|++||++|+|.|.+.+|+.+|+.||++|+++|++ |+ + |+|+|+|||.|||++++++.+........ .
T Consensus 7 ~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~-N~---~------g~N~F~Dlt~eEf~~~~~~~~~~~~~~~~-~- 74 (312)
T 1xkg_A 7 TFEEYKKAFNKSYATFEDEEAARKNFLESVKYVQS-NG---G------AINHLSDLSLDEFKNRFLMSAEAFEHLKT-Q- 74 (312)
T ss_dssp SHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHH-HC---C------CCCTTTTSCHHHHHHHHSBCHHHHHHHHH-H-
T ss_pred HHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHh-cc---C------CCCcccCCCHHHHHHHhcCCCCccccccC-C-
Confidence 59999999999999889999999999999999999 63 2 99999999999999876663221100000 0
Q ss_pred CCccccC------CCCCCCceecccCCCCCcccccccc-------HHHHHHHHHHHHcCCCcCCCHHHHHhhcCCCCCCC
Q 043883 113 GTPFLYK------SSQVPPSVNWIEKGAVTPVKYQGQC-------AVAAVEGINAIKINRLVSLSEQQLVDCATNDNNNG 179 (348)
Q Consensus 113 ~~~~~~~------~~~lP~~~Dwr~~g~v~pv~dQg~C-------a~~~~e~~~~i~~~~~~~lS~q~l~dC~~~~~~~g 179 (348)
..+... ..+||++||||++|+|+||||||.| +++++|++++|++++.+.||+|+|+||+. ..|
T Consensus 75 -~~~~~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~---~~G 150 (312)
T 1xkg_A 75 -FDLNAETNACSINGNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRDQSLDLAEQELVDCAS---QHG 150 (312)
T ss_dssp -HC-----CBCCCCSCCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC---SST
T ss_pred -cccccccccccccccCCCccccccCCCcCCccccCCCCccHHHHHHHHHHHHHHHHhCCCCCcCHHHHHhccC---CCC
Confidence 001000 1379999999999999999999877 78889999999999999999999999982 389
Q ss_pred CCCCchhHHHHHHHHcCCCCCCCcccccCCcCCCCCCcccCCccEEEeeeEecCCCCHHHHHHHHHc--CCeEEEEecC-
Q 043883 180 CYGGFMDDAFKYIIQNKGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVAN--QPVSVAIDAS- 256 (348)
Q Consensus 180 C~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~--GPV~v~i~~~- 256 (348)
|+||++..|++|+.+. ||++|++|||.+. .+.|. . .....+++++|..|+..++++||++|+. |||+|+|+++
T Consensus 151 C~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~-~~~C~-~-~~~~~~~i~~y~~v~~~~~~~ik~al~~~~GPV~v~i~~~~ 226 (312)
T 1xkg_A 151 CHGDTIPRGIEYIQHN-GVVQESYYRYVAR-EQSCR-R-PNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKD 226 (312)
T ss_dssp TBCCCHHHHHHHHHHH-CEEBGGGSCCCSS-CCCCC-C-CSSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESC
T ss_pred CCCCCHHHHHHHHHHc-CCCccccCCccCC-CCCCC-C-CCCceEEEeeEEEeCCCCHHHHHHHHHhcCCCEEEEEEecc
Confidence 9999999999999984 9999999999998 88998 4 3445788999999987799999999985 9999999998
Q ss_pred --ccccccCceEcCC-CC-C-CCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCcccccccccee
Q 043883 257 --ALQFYSGGVFNGY-CE-T-FLNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFP 331 (348)
Q Consensus 257 --~f~~Y~~Giy~~~-c~-~-~~~Hav~iVGyg~~~~g~~yWiikNSWG~~WGe~GY~~i~~~~~~~~~~Cgi~~~~~~p 331 (348)
+|++|++|||..+ |+ . . +|||+|||||++ +|.+|||||||||++||++|||||+|+. |.|||++.++||
T Consensus 227 ~~~f~~Y~~GVy~~~~c~~~~~-~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~----n~CgI~~~~~~~ 300 (312)
T 1xkg_A 227 LDAFRHYDGRTIIQRDNGYQPN-YHAVNIVGYSNA-QGVDYWIVRNSWDTNWGDNGYGYFAANI----DLMMIEEYPYVV 300 (312)
T ss_dssp HHHHHTCCSSSCBCCCCSSCCE-EEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTTCCEEE
T ss_pred cccccccCCcEEcCCCCCCCcC-ceEEEEEEEecc-CCceEEEEEeCCCCcccCCcEEEEEcCC----CcccccceeEEe
Confidence 6999999999874 86 4 6 999999999985 8999999999999999999999999983 679999999999
Q ss_pred e
Q 043883 332 V 332 (348)
Q Consensus 332 ~ 332 (348)
+
T Consensus 301 ~ 301 (312)
T 1xkg_A 301 I 301 (312)
T ss_dssp E
T ss_pred e
Confidence 9
No 10
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C*
Probab=100.00 E-value=1.2e-66 Score=511.01 Aligned_cols=271 Identities=27% Similarity=0.489 Sum_probs=178.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccccCCCcEEEE-cccCCCCCHHHHHHhhcCcCCCCCcccccCCCCccccCC-CCCCCc
Q 043883 49 AENSKRFEIFKDNLVAVERFNNAAIGNRSYTLR-LNKFADLTPQEFIASQTGFKMSDHSSSLKANGTPFLYKS-SQVPPS 126 (348)
Q Consensus 49 ~E~~~R~~iF~~n~~~I~~~N~~~~~~~s~~~g-~N~FsD~t~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lP~~ 126 (348)
.|+.+|+.||++|+++|++||++ +.+|+++ +|+|+|||.|||++++++.+........ .......... .+||++
T Consensus 135 ~~~~~R~~if~~N~~~I~~~N~~---~~~~~~~~~n~faDlT~eEf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~lP~s 210 (441)
T 3pdf_A 135 SQEKYSNRLYKYDHNFVKAINAI---QKSWTATTYMEYETLTLGDMIRRSGGHSRKIPRPKP-APLTAEIQQKILFLPTS 210 (441)
T ss_dssp ---------------------------------------------------------------------------CCCSC
T ss_pred hhHHHHHHHHHHHHHHHHHHHcc---CCceEeecccccccCCHHHHHHHhCCCccccccccc-CccccccccccccCCCC
Confidence 56789999999999999999987 5799998 8999999999999988765432211000 0000011112 579999
Q ss_pred eecccCC---CCCcccccccc-------HHHHHHHHHHHHcCCCc--CCCHHHHHhhcCCCCCCCCCCCchhHH-HHHHH
Q 043883 127 VNWIEKG---AVTPVKYQGQC-------AVAAVEGINAIKINRLV--SLSEQQLVDCATNDNNNGCYGGFMDDA-FKYII 193 (348)
Q Consensus 127 ~Dwr~~g---~v~pv~dQg~C-------a~~~~e~~~~i~~~~~~--~lS~q~l~dC~~~~~~~gC~GG~~~~a-~~~~~ 193 (348)
||||+++ +|+||||||.| +++++|++++|++++.+ .||||+|+||+. .+.||+||++..| ++|++
T Consensus 211 ~DwR~~~g~~~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~~~LSeQ~LvdC~~--~~~GC~GG~~~~aa~~yi~ 288 (441)
T 3pdf_A 211 WDWRNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSQ--YAQGCEGGFPYLIAGKYAQ 288 (441)
T ss_dssp EETTCBTTBCCSCCCCBCTTSBCHHHHHHHHHHHHHHHHHHTTSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHTTHHHH
T ss_pred EECCcCCCCCccCcccccCCCchHHHHHHHHHHHHHHHHhccCCCccccCHHHHHhhcc--CCCCCCCCchhHHHHHHHH
Confidence 9999973 89999999977 78899999999999765 599999999986 4899999999997 89998
Q ss_pred HcCCCCCCCcccccCCcCCCCCCcccCCccEEEeeeEecC----CCCHHHHHHHHH-cCCeEEEEecC-ccccccCceEc
Q 043883 194 QNKGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVP----PNDEESLLKAVA-NQPVSVAIDAS-ALQFYSGGVFN 267 (348)
Q Consensus 194 ~~~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~i~~~~~v~----~~~~~~lk~~l~-~GPV~v~i~~~-~f~~Y~~Giy~ 267 (348)
++ ||++|++|||.+. .+.|... .....+++.+|..++ ..++++||++|+ +|||+|+|+++ +|++|++|||.
T Consensus 289 ~~-Gi~tE~~yPY~~~-~~~C~~~-~~~~~~~~~~y~~v~~~~~~~~e~~ik~al~~~GPVsvai~a~~~F~~Y~sGVy~ 365 (441)
T 3pdf_A 289 DF-GLVEEACFPYTGT-DSPCKMK-EDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYKKGIYH 365 (441)
T ss_dssp HT-CBCBGGGSCCCSS-CCCSCCC-SSCCCBCEEEEEETTSSTTCCCHHHHHHHHHHHCCEEEEECCCGGGGGCCSSEEC
T ss_pred hc-CCCcHHHeeeccc-CCCCCCc-cccceeeeccEEEeCCccCCCcHHHHHHHHHHCCCeEEEEEecccccccCCceEe
Confidence 86 9999999999998 8899875 334556788888886 358999999998 89999999999 99999999998
Q ss_pred CCCC-------CCCCeEEEEEEeeec-CCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccceee
Q 043883 268 GYCE-------TFLNHGVTAVGYGTS-EEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPV 332 (348)
Q Consensus 268 ~~c~-------~~~~Hav~iVGyg~~-~~g~~yWiikNSWG~~WGe~GY~~i~~~~~~~~~~Cgi~~~~~~p~ 332 (348)
.++. ..++|||+|||||++ ++|.+|||||||||++|||+|||||+|+. |.|||++.++++.
T Consensus 366 ~~~~~~~~~~~~~~~HaV~iVGyG~~~~~G~~YWIVkNSWG~~WGe~GYfri~rg~----n~CGI~s~~~a~~ 434 (441)
T 3pdf_A 366 HTGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGT----DECAIESIAVAAT 434 (441)
T ss_dssp CC---CCCCCCCCCCEEEEEEEEEECTTTCCEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTSCCEEEE
T ss_pred cCCCCcccCCCCcCCeEEEEEEecccCCCCceEEEEEcCCCCCcCCCeEEEEEcCC----CccCCCCceEEee
Confidence 7532 248999999999986 47999999999999999999999999996 5799999999877
No 11
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A*
Probab=100.00 E-value=3.3e-65 Score=484.69 Aligned_cols=268 Identities=24% Similarity=0.424 Sum_probs=176.2
Q ss_pred HHHHHHHHHHHHHHHHhcccccCCCcEEEEcc-cCCCCCHHHHHHhhcCcCCCCCcccccCCCCccccC--CCCCCCcee
Q 043883 52 SKRFEIFKDNLVAVERFNNAAIGNRSYTLRLN-KFADLTPQEFIASQTGFKMSDHSSSLKANGTPFLYK--SSQVPPSVN 128 (348)
Q Consensus 52 ~~R~~iF~~n~~~I~~~N~~~~~~~s~~~g~N-~FsD~t~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~lP~~~D 128 (348)
+.|+..+..+.++|++||++ .+.+|++++| +|+|||.|||++++ +.++...... ......+... ..+||++||
T Consensus 2 ~~~~~a~~~~~~~i~~~N~~--~~~~~~~~~n~~f~dlt~eE~~~~~-g~~~~~~~~~-~~~~~~~~~~~~~~~lP~s~D 77 (325)
T 3hhi_A 2 LVAEDAPVLSKAFVDRVNRL--NRGIWKAKYDGVMQNITLREAKRLN-GVIKKNNNAS-ILPKRRFTEEEARAPLPSSFD 77 (325)
T ss_dssp ---------------------------------------------------------C-CSCBCCCCHHHHHCCCCSCEE
T ss_pred CcccccccccHHHHHHHHhC--CCCceEEecccccccCCHHHHHHHh-CCCCCCcccc-cccCccccccccccCCCCcEe
Confidence 46778889999999999987 4579999999 89999999998764 4332211100 0000111111 157999999
Q ss_pred cccC----CCCCcccccccc-------HHHHHHHHHHHHcCC-CcCCCHHHHHhhcCCCCCCCCCCCchhHHHHHHHHcC
Q 043883 129 WIEK----GAVTPVKYQGQC-------AVAAVEGINAIKINR-LVSLSEQQLVDCATNDNNNGCYGGFMDDAFKYIIQNK 196 (348)
Q Consensus 129 wr~~----g~v~pv~dQg~C-------a~~~~e~~~~i~~~~-~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~~ 196 (348)
||++ |.|+||||||.| +++++|++++|++++ .+.||||+|+||+.. ++.||+||++..||+|++++
T Consensus 78 wR~~w~~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~~~~~~~LSeQ~LvdC~~~-~~~GC~GG~~~~A~~yi~~~- 155 (325)
T 3hhi_A 78 SAEAWPNCPTIPQIADQSACGSCWAVAAASAMSDRFCTMGGVQDVHISAGDLLACCSD-CGDGCNGGDPDRAWAYFSST- 155 (325)
T ss_dssp HHHHSTTCTTTTCCCBCCSSBCHHHHHHHHHHHHHHHHTSSCSSCCBCHHHHHHHCGG-GBCTTBCBCHHHHHHHHHHT-
T ss_pred hhHhcCCCCccccccCCCCccccHHHHHHHHHHHHHHHHhCCCccccCHHHHHHhccC-CCCCCCCCCHHHHHHHHHHh-
Confidence 9998 899999999977 788899999999997 899999999999874 47899999999999999987
Q ss_pred CCCCCCccccc-CC---------cCCCCCCc-------------c--cCCccEEEeeeEecCCCCHHHHHHHHH-cCCeE
Q 043883 197 GITNDAVYSYE-GM---------STGICDSI-------------K--AEDHAAQITNYEDVPPNDEESLLKAVA-NQPVS 250 (348)
Q Consensus 197 Gi~~e~~yPY~-~~---------~~~~C~~~-------------~--~~~~~~~i~~~~~v~~~~~~~lk~~l~-~GPV~ 250 (348)
||++|++|||. +. ..+.|... . .......+..|. + .++++||++|+ +|||+
T Consensus 156 Gi~~e~~yPY~~~~c~~~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~y~-v--~~~~~i~~~i~~~GPV~ 232 (325)
T 3hhi_A 156 GLVSDYCQPYPFPHCSHHSKSKNGYPPCSQFNFDTPKCDYTCDDPTIPVVNYRSWTSYA-L--QGEDDYMRELFFRGPFE 232 (325)
T ss_dssp CBCBTTTSCCSSCCCBSSSCCTTCCCBGGGCCCCCCCCCSSCSSTTSCCCCBCEEEEEE-E--CSHHHHHHHHHHHCCEE
T ss_pred CCCcccccCCccccccccccccccCCCCCCcccCCcchhhcccccccccceEEeecceE-e--CCHHHHHHHHHHCCCEE
Confidence 99999999998 21 01456510 0 012234567776 5 58999999998 89999
Q ss_pred EEEecC-ccccccCceEcCCCCCC-CCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCcccccccc
Q 043883 251 VAIDAS-ALQFYSGGVFNGYCETF-LNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFA 328 (348)
Q Consensus 251 v~i~~~-~f~~Y~~Giy~~~c~~~-~~Hav~iVGyg~~~~g~~yWiikNSWG~~WGe~GY~~i~~~~~~~~~~Cgi~~~~ 328 (348)
|+|+++ +|++|++|||..+|+.. ++|||+|||||+ ++|++|||||||||++|||+|||||+|+. |.|||++.+
T Consensus 233 v~i~~~~~f~~Y~~GVy~~~~~~~~~~HaV~iVGyG~-~~g~~YWivkNSWG~~WGe~GY~~i~rg~----n~CGI~~~~ 307 (325)
T 3hhi_A 233 VAFDVYEDFIAYNSGVYHHVSGQYLGGHAVRLVGWGT-SNGVPYWKIANSWNTEWGMDGYFLIRRGS----SECGIEDGG 307 (325)
T ss_dssp EEEEEEHHHHTCCSSEECCCSCCEEEEEEEEEEEEEE-ETTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTSCE
T ss_pred EEEEeccccccccCceecCCCCCCCCCEEEEEEEEEe-cCCceEEEEEeCCCCCcccCCEEEEEcCC----CeecCccce
Confidence 999999 99999999999877654 599999999998 48999999999999999999999999996 579999999
Q ss_pred ceeee
Q 043883 329 SFPVS 333 (348)
Q Consensus 329 ~~p~~ 333 (348)
+++++
T Consensus 308 ~~g~p 312 (325)
T 3hhi_A 308 SAGIP 312 (325)
T ss_dssp EEEEE
T ss_pred EEeec
Confidence 99883
No 12
>3p5u_A Actinidin; SAD, cysteine proteinases, hydrolase; 1.50A {Actinidia arguta} SCOP: d.3.1.1 PDB: 3p5v_A 3p5w_A 3p5x_A 1aec_A* 2act_A
Probab=100.00 E-value=4.5e-61 Score=433.83 Aligned_cols=207 Identities=53% Similarity=0.973 Sum_probs=189.8
Q ss_pred CCCceecccCCCCCcccccccc-------HHHHHHHHHHHHcCCCcCCCHHHHHhhcCCCCCCCCCCCchhHHHHHHHHc
Q 043883 123 VPPSVNWIEKGAVTPVKYQGQC-------AVAAVEGINAIKINRLVSLSEQQLVDCATNDNNNGCYGGFMDDAFKYIIQN 195 (348)
Q Consensus 123 lP~~~Dwr~~g~v~pv~dQg~C-------a~~~~e~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~ 195 (348)
||++||||++|.|+||||||.| +++++|+++++++++.+.||||+|+||+...++.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~i~~~~~~~LS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~ 80 (220)
T 3p5u_A 1 LPDYVDWRSSGAVVDIKDQGQCGSAWAFSTIAAVEGINKIATGDLISLSEQELVDCGRTQNTRGCDGGFMTDGFQFIINN 80 (220)
T ss_dssp CCSCEETTTTTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCCSSCCTTBCCCHHHHHHHHHHH
T ss_pred CCCCCcCCcCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHhHcEECCCCCCCCCCCCCCHHHHHHHHHHh
Confidence 7999999999999999999876 788899999999999999999999999976458899999999999999987
Q ss_pred CCCCCCCcccccCCcCCCCCCcccCCccEEEeeeEecCCCCHHHHHHHHHcCCeEEEEecC--ccccccCceEcCCCCCC
Q 043883 196 KGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVANQPVSVAIDAS--ALQFYSGGVFNGYCETF 273 (348)
Q Consensus 196 ~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~GPV~v~i~~~--~f~~Y~~Giy~~~c~~~ 273 (348)
+|+++|++|||.+. .+.|.........+++.+|..++..++++|+++|++|||+|+|++. +|++|++|||+.+|+..
T Consensus 81 ~Gi~~e~~yPY~~~-~~~C~~~~~~~~~~~i~~~~~v~~~~~~~l~~~l~~GPV~v~~~~~~~~f~~Y~~Giy~~~~~~~ 159 (220)
T 3p5u_A 81 GGINTEANYPYTAE-EGQCNLDLQQEKYVSIDTYENVPYNNEWALQTAVAYQPVSVALEAAGYNFQHYSSGIFTGPCGTA 159 (220)
T ss_dssp TCBCBTTTSCCCSS-CCCCCHHHHTCCSBCCCEEEECCTTCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCCCCCS
T ss_pred CCcCcccccccccC-CCCcCcCCCCCceEEEccEEEeCCCcHHHHHHHHhcCCEEEEEecCchhhccccCceECCCCCCc
Confidence 79999999999998 8899865333446789999999878999999999899999999996 89999999999999888
Q ss_pred CCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccceee
Q 043883 274 LNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPV 332 (348)
Q Consensus 274 ~~Hav~iVGyg~~~~g~~yWiikNSWG~~WGe~GY~~i~~~~~~~~~~Cgi~~~~~~p~ 332 (348)
++|||+|||||+ ++|++|||||||||++|||+|||||+|+.++ .|+|||++.++||+
T Consensus 160 ~~HaV~iVGyg~-~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~-~~~Cgi~~~~~~p~ 216 (220)
T 3p5u_A 160 VDHAVTIVGYGT-EGGIDYWIVKNSWGTTWGEEGYMRIQRNVGG-VGQCGIAKKASYPV 216 (220)
T ss_dssp CCEEEEEEEEEE-ETTEEEEEEECSBCTTSTBTTEEEEECCCCT-TCGGGTTSSCEEEE
T ss_pred cceEEEEEEEec-CCCceEEEEECCCCCCcccCCEEEEECCCCC-CCccCcccccceEE
Confidence 999999999997 4899999999999999999999999999863 46899999999999
No 13
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1
Probab=100.00 E-value=5.5e-61 Score=435.60 Aligned_cols=216 Identities=60% Similarity=1.033 Sum_probs=192.9
Q ss_pred CCCCceecccCCCCCcccccccc-------HHHHHHHHHHHHcCCCcCCCHHHHHhhcCCCCCCCCCCCchhHHHHHHHH
Q 043883 122 QVPPSVNWIEKGAVTPVKYQGQC-------AVAAVEGINAIKINRLVSLSEQQLVDCATNDNNNGCYGGFMDDAFKYIIQ 194 (348)
Q Consensus 122 ~lP~~~Dwr~~g~v~pv~dQg~C-------a~~~~e~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~ 194 (348)
+||++||||++|+|+||||||.| +++++|++++|++++.+.||+|+|+||+.. .+.||+||++..|++|+.+
T Consensus 1 ~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~-~~~gC~GG~~~~a~~y~~~ 79 (229)
T 1s4v_A 1 TVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTD-QNQGCNGGLMDYAFEFIKQ 79 (229)
T ss_dssp CCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCS-SCCTTBCBCHHHHHHHHHH
T ss_pred CCCCCEeCCCCCCCCCCccCccchHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhCCC-CCCCCCCCCHHHHHHHHHH
Confidence 48999999999999999999876 678899999999999999999999999863 4789999999999999998
Q ss_pred cCCCCCCCcccccCCcCCCCCCcccCCccEEEeeeEecCCCCHHHHHHHHHcCCeEEEEec-C-ccccccCceEcCCCCC
Q 043883 195 NKGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVANQPVSVAIDA-S-ALQFYSGGVFNGYCET 272 (348)
Q Consensus 195 ~~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~GPV~v~i~~-~-~f~~Y~~Giy~~~c~~ 272 (348)
++|+++|++|||.+. .+.|.........+++.+|..++..++++||++|++|||+|+|++ . +|++|++|||+.+|+.
T Consensus 80 ~~Gi~~e~~yPY~~~-~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~c~~ 158 (229)
T 1s4v_A 80 RGGITTEANYPYEAY-DGTCDVSKENAPAVSIDGHENVPENDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGSCGT 158 (229)
T ss_dssp HTCBCBTTTSCCCSS-CCCCCHHHHTCCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCC
T ss_pred hCCccccccCCccCC-CCCCCCCCCCCcEEEeeeEEEeCCccHHHHHHHHhcCCEEEEEEeCcHHHhhCCCcEECCCCCC
Confidence 779999999999998 889986533345678999999987789999999999999999999 4 9999999999988988
Q ss_pred CCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccceeeecCCCCCC
Q 043883 273 FLNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPVSKESAQPS 340 (348)
Q Consensus 273 ~~~Hav~iVGyg~~~~g~~yWiikNSWG~~WGe~GY~~i~~~~~~~~~~Cgi~~~~~~p~~~~~~~~~ 340 (348)
.++|||+|||||++.+|++|||||||||++|||+|||||+|+.+...|.|||+++++||+ ...+.||
T Consensus 159 ~~~HaV~iVGyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~-~~~~~~~ 225 (229)
T 1s4v_A 159 ELDHGVAIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPI-KKSSNNP 225 (229)
T ss_dssp CCCEEEEEEEEEECTTSCEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEE-CCSSCC-
T ss_pred CCCeEEEEEEeccccCCCCEEEEEeCCCCCccCCcEEEEEcCCCCCCCcCcccccceeeE-ecCCCCc
Confidence 899999999999964499999999999999999999999999754457899999999999 5555544
No 14
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A
Probab=100.00 E-value=2.1e-61 Score=457.49 Aligned_cols=255 Identities=24% Similarity=0.489 Sum_probs=203.1
Q ss_pred HHHHHHHhcccccCCCcEEEEcccCCCCCHHHHHHhhcCcCCCCCcccccCCCCccccCC-CCCCCceecccC----CCC
Q 043883 61 NLVAVERFNNAAIGNRSYTLRLNKFADLTPQEFIASQTGFKMSDHSSSLKANGTPFLYKS-SQVPPSVNWIEK----GAV 135 (348)
Q Consensus 61 n~~~I~~~N~~~~~~~s~~~g~N~FsD~t~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lP~~~Dwr~~----g~v 135 (348)
+.++|++||++ +.+|++|+| |+|+|.||++. +++.+...... ..++.... .+||++||||++ +.|
T Consensus 11 ~~~~i~~~N~~---~~~~~~~~n-f~~~~~e~~~~-~lg~~~~~~~~-----~~~~~~~~~~~lP~s~DwR~~~~~c~~v 80 (317)
T 3pbh_A 11 SDELVNYVNKR---NTTWQAGHN-FYNVDMSYLKR-LCGTFLGGPKP-----PQRVMFTEDLKLPASFDAREQWPQCPTI 80 (317)
T ss_dssp CHHHHHHHHHH---TCSEEECCC-CSSCCHHHHHH-TCCBCTTCCCC-----SEEECCCSCCCCCSSEEHHHHCTTCGGG
T ss_pred cHHHHHHHHCC---CCCeEEeec-cccCCHHHHHH-HcCCCCCcccc-----CcccccccccCCCCCEechhccCCCCCc
Confidence 46789999987 689999999 99999887765 56654432211 11111122 579999999998 679
Q ss_pred Ccccccccc-------HHHHHHHHHHHHcCC--CcCCCHHHHHhhcCCCCCCCCCCCchhHHHHHHHHcCCCCCCCcc--
Q 043883 136 TPVKYQGQC-------AVAAVEGINAIKINR--LVSLSEQQLVDCATNDNNNGCYGGFMDDAFKYIIQNKGITNDAVY-- 204 (348)
Q Consensus 136 ~pv~dQg~C-------a~~~~e~~~~i~~~~--~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~y-- 204 (348)
+||||||.| +++++|++++|+++. ++.||+|+|+||+...++.||+||++..||+|++++ ||++|++|
T Consensus 81 tpVkdQg~CGSCWAFsa~~ale~~~~i~~~~~~~~~LSeq~LvdC~~~~~~~GC~GG~~~~A~~yi~~~-Gi~te~~Y~~ 159 (317)
T 3pbh_A 81 KEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRK-GLVSGGLYES 159 (317)
T ss_dssp TCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHSCTTTBCGGGCBCHHHHHHHHHHT-CEEBBCSTTC
T ss_pred CCccccCCccchHHHHHHHHHHHHHHHHhCCCCcccCCHHHHHHhccccCCCCCCCCCHHHHHHHHHHh-CCCcchhccC
Confidence 999999977 788899999999874 789999999999863357899999999999999987 99999888
Q ss_pred -----cccCC--------cCCCCCCcc--------cC---C-c----cEEEeeeEecCCCCHHHHHHHHH-cCCeEEEEe
Q 043883 205 -----SYEGM--------STGICDSIK--------AE---D-H----AAQITNYEDVPPNDEESLLKAVA-NQPVSVAID 254 (348)
Q Consensus 205 -----PY~~~--------~~~~C~~~~--------~~---~-~----~~~i~~~~~v~~~~~~~lk~~l~-~GPV~v~i~ 254 (348)
||... ..+.|.... .. . . .......+.++ .++++||++|+ +|||+|+|+
T Consensus 160 ~~~c~PY~~~~c~~~~~~~~~~C~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~v~-~~e~~i~~~i~~~GPV~v~i~ 238 (317)
T 3pbh_A 160 HVGCRPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVS-NSEKDIMAEIYKNGPVEGAFS 238 (317)
T ss_dssp CCBSSCCCSCCCCCCCTTCCSCCCSCCCCCCCCCSCCSSCCSCGGGSEECBCCCEEEC-SCHHHHHHHHHHHCCEEEEEE
T ss_pred CCCCcCcccCcccccccCcCCCCCCcCCCCcccccccCCCccceeeeeeeeeecccCC-cHHHHHHHHHHHCCCEEEEEE
Confidence 99842 134554210 00 0 0 01112223454 58999999998 899999999
Q ss_pred cC-ccccccCceEcCCCCCC-CCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccceee
Q 043883 255 AS-ALQFYSGGVFNGYCETF-LNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPV 332 (348)
Q Consensus 255 ~~-~f~~Y~~Giy~~~c~~~-~~Hav~iVGyg~~~~g~~yWiikNSWG~~WGe~GY~~i~~~~~~~~~~Cgi~~~~~~p~ 332 (348)
++ +|++|++|||..+|+.. ++|||+|||||++ +|++|||||||||++|||+|||||+|+. |.|||++.++.++
T Consensus 239 ~~~~f~~Y~~GVy~~~~~~~~~~HaV~iVGyG~~-~g~~YWivkNSWG~~WGe~GY~ri~rg~----n~CgI~~~~~a~~ 313 (317)
T 3pbh_A 239 VYSDFLLYKSGVYQHVTGEMMGGHAIRILGWGVE-NGTPYWLVANSWNTDWGDNGFFKILRGQ----DHCGIESEVVAGI 313 (317)
T ss_dssp EEGGGGGEEEEEECCCSCCEEEEEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTTSCEECC
T ss_pred ecccccCCCCcEEccCCCCCCCCEEEEEEEEEEe-CCeeEEEEEcCCCCCcCCCcEEEEEcCC----CcccCCCceEeee
Confidence 99 99999999999988765 4999999999984 8999999999999999999999999996 5799999998877
No 15
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare}
Probab=100.00 E-value=2.9e-61 Score=444.61 Aligned_cols=215 Identities=55% Similarity=1.013 Sum_probs=192.9
Q ss_pred CCCCceecccCCCCCcccccccc-------HHHHHHHHHHHHcCCCcCCCHHHHHhhcCCCCCCCCCCCchhHHHHHHHH
Q 043883 122 QVPPSVNWIEKGAVTPVKYQGQC-------AVAAVEGINAIKINRLVSLSEQQLVDCATNDNNNGCYGGFMDDAFKYIIQ 194 (348)
Q Consensus 122 ~lP~~~Dwr~~g~v~pv~dQg~C-------a~~~~e~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~ 194 (348)
+||++||||++|+|+||||||.| +++++|++++|++++.+.||+|+|+||+.. ++.||+||++..||+|+.+
T Consensus 3 ~lP~~~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~lvdC~~~-~~~GC~GG~~~~a~~yi~~ 81 (262)
T 2fo5_A 3 DLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTA-DNDGCQGGLMDNAFEYIKN 81 (262)
T ss_dssp CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCS-SCCGGGCBCHHHHHHHHHH
T ss_pred CCCCcccCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhcCC-CCCCCCCCCHHHHHHHHHH
Confidence 68999999999999999999876 678899999999999999999999999863 5789999999999999998
Q ss_pred cCCCCCCCcccccCCcCCCCCCcc--cCCc-cEEEeeeEecCCCCHHHHHHHHHcCCeEEEEecC--ccccccCceEcCC
Q 043883 195 NKGITNDAVYSYEGMSTGICDSIK--AEDH-AAQITNYEDVPPNDEESLLKAVANQPVSVAIDAS--ALQFYSGGVFNGY 269 (348)
Q Consensus 195 ~~Gi~~e~~yPY~~~~~~~C~~~~--~~~~-~~~i~~~~~v~~~~~~~lk~~l~~GPV~v~i~~~--~f~~Y~~Giy~~~ 269 (348)
++|+++|++|||.+. .+.|.... .... .+++.+|..++..++++||++|++|||+|+|+++ +|++|++|||+.+
T Consensus 82 ~~Gi~~e~~yPY~~~-~~~C~~~~~~~~~~~~~~i~~y~~v~~~~e~~ik~al~~GPV~v~i~~~~~~f~~Y~sGVy~~~ 160 (262)
T 2fo5_A 82 NGGLITEAAYPYRAA-RGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVANQPVSVAVEASGKAFMFYSEGVFTGE 160 (262)
T ss_dssp TTCEEBTTTSCCCSS-CCCCCHHHHHHHCCCEECCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCC
T ss_pred cCCcCchhcCCCcCc-cCccCCcccccCCceeEEeceEEEcCCchHHHHHHHHHhCCEEEEEecChHHHhccCCceECCC
Confidence 779999999999998 88998652 1345 6889999999878999999999999999999997 8999999999988
Q ss_pred CCCCCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccceeeecCCCCC
Q 043883 270 CETFLNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPVSKESAQP 339 (348)
Q Consensus 270 c~~~~~Hav~iVGyg~~~~g~~yWiikNSWG~~WGe~GY~~i~~~~~~~~~~Cgi~~~~~~p~~~~~~~~ 339 (348)
|+..++|||+|||||++.+|++|||||||||++|||+|||||+|+.++..|+|||++.++||+ ...++|
T Consensus 161 c~~~~~HaV~IVGyg~~~~G~~YWivkNSWG~~WGe~GY~ri~r~~n~~~~~CgI~~~~~~p~-~~~~~~ 229 (262)
T 2fo5_A 161 CGTELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAMEASYPV-KTYSKP 229 (262)
T ss_dssp CCCCCCEEEEEEEEEECTTSCEEEEEECSBCTTSTBTTEEEEESSCSCTTCGGGTTTSCEEEE-CCC---
T ss_pred CCCcCCEEEEEEEEcccCCCceEEEEEeCCCCCCCCCeEEEEEcCCCCCCCccceeeeeeEEE-ecCCCC
Confidence 988899999999999965699999999999999999999999999865558899999999999 655555
No 16
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1
Probab=100.00 E-value=1.3e-60 Score=431.06 Aligned_cols=206 Identities=54% Similarity=1.052 Sum_probs=188.8
Q ss_pred CCCCceecccCCCCCcccccccc-------HHHHHHHHHHHHcCCCcCCCHHHHHhhcCCCCCCCCCCCchhHHHHHHHH
Q 043883 122 QVPPSVNWIEKGAVTPVKYQGQC-------AVAAVEGINAIKINRLVSLSEQQLVDCATNDNNNGCYGGFMDDAFKYIIQ 194 (348)
Q Consensus 122 ~lP~~~Dwr~~g~v~pv~dQg~C-------a~~~~e~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~ 194 (348)
+||++||||++|.|+||||||.| +++++|++++|++++.+.||+|+|+||+.. +.||+||++..||+|+++
T Consensus 2 ~lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~--~~gC~GG~~~~a~~y~~~ 79 (221)
T 1cqd_A 2 DLPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTTA--NHGCRGGWMNPAFQFIVN 79 (221)
T ss_dssp -CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT--SCTTBCCCHHHHHHHHHH
T ss_pred CCCCcCcCCCCCCcCCcccCCCCccHHHHHHHHHHHHHHHHhcCCeeeeccceeEECCCC--CCCCCCCCHHHHHHHHHH
Confidence 68999999999999999999876 678899999999999999999999999864 789999999999999998
Q ss_pred cCCCCCCCcccccCCcCCCCCCcccCCccEEEeeeEecCCCCHHHHHHHHHcCCeEEEEecC--ccccccCceEcCCCCC
Q 043883 195 NKGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVANQPVSVAIDAS--ALQFYSGGVFNGYCET 272 (348)
Q Consensus 195 ~~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~GPV~v~i~~~--~f~~Y~~Giy~~~c~~ 272 (348)
++|+++|++|||.+. .+.|.... ....+++.+|..++..++++||++|++|||+|+|++. +|++|++|||+.+|+.
T Consensus 80 ~~Gi~~e~~yPY~~~-~~~C~~~~-~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~~~~ 157 (221)
T 1cqd_A 80 NGGINSEETYPYRGQ-DGICNSTV-NAPVVSIDSYENVPSHNEQSLQKAVANQPVSVTMDAAGRDFQLYRSGIFTGSCNI 157 (221)
T ss_dssp HTSBCBTTTSCCCSS-CCCCCSSS-CCCSBCCSEEEECCSSCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCCCCC
T ss_pred hCCccccccCCccCC-CCCcCCCC-CCceEEeccEEEeCCchHHHHHHHHHhCCEEEEEeccCcccccccCccccCCCCC
Confidence 779999999999998 88998652 3456889999999877899999999999999999997 8999999999988988
Q ss_pred CCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccceee
Q 043883 273 FLNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPV 332 (348)
Q Consensus 273 ~~~Hav~iVGyg~~~~g~~yWiikNSWG~~WGe~GY~~i~~~~~~~~~~Cgi~~~~~~p~ 332 (348)
.++|||+|||||++ +|++|||||||||++|||+|||||+|+.+...|.|||+++++||+
T Consensus 158 ~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~ 216 (221)
T 1cqd_A 158 SANHALTVVGYGTE-NDKDFWIVKNSWGKNWGESGYIRAERNIENPDGKCGITRFASYPV 216 (221)
T ss_dssp CCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEE
T ss_pred cCCeEEEEEEEccc-CCCcEEEEEeCCCCCcccCCEEEEEcCCCCCCcccceeeeeeEEE
Confidence 89999999999985 899999999999999999999999999754447899999999999
No 17
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A*
Probab=100.00 E-value=2e-60 Score=428.27 Aligned_cols=205 Identities=46% Similarity=0.887 Sum_probs=187.9
Q ss_pred CCCceecccCCCCCcccccccc-------HHHHHHHHHHHHcCCCcCCCHHHHHhhcCCCCCCCCCCCchhHHHHHHHHc
Q 043883 123 VPPSVNWIEKGAVTPVKYQGQC-------AVAAVEGINAIKINRLVSLSEQQLVDCATNDNNNGCYGGFMDDAFKYIIQN 195 (348)
Q Consensus 123 lP~~~Dwr~~g~v~pv~dQg~C-------a~~~~e~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~ 195 (348)
||++||||++|.|+||||||.| +++++|++++|++++.+.||+|+|+||+. .+.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~yi~~~ 78 (216)
T 1ppo_A 1 LPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER--RSHGCKGGYPPYALEYVAKN 78 (216)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCS--SSCTTBCCCHHHHHHHHHHH
T ss_pred CCCcCcCCCCCCCCCCccCCcCccHHHHHHHHHHHHHHHHccCCceecCHHHHHhccC--CCCCCCCCCHHHHHHHHHHh
Confidence 7999999999999999999876 67889999999999999999999999986 47899999999999999987
Q ss_pred CCCCCCCcccccCCcCCCCCCcccCCccEEEeeeEecCCCCHHHHHHHHHcCCeEEEEecC--ccccccCceEcCCCCCC
Q 043883 196 KGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVANQPVSVAIDAS--ALQFYSGGVFNGYCETF 273 (348)
Q Consensus 196 ~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~GPV~v~i~~~--~f~~Y~~Giy~~~c~~~ 273 (348)
|+++|++|||.+. .+.|.........+++.+|..++..++++||++|++|||+|+|+++ +|++|++|||+.+|+..
T Consensus 79 -Gi~~e~~yPY~~~-~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~~~~~~~~f~~Y~~Giy~~~~~~~ 156 (216)
T 1ppo_A 79 -GIHLRSKYPYKAK-QGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCGTK 156 (216)
T ss_dssp -CBCBTTTSCCCSS-CCCCCGGGCCSCCBCCCEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHHCCSSEECCSCCSC
T ss_pred -CcCccccCCccCC-CCCcCCCCCCCceEEeccEEEECCCCHHHHHHHHHhCCEEEEEecCChhhhhcCCceECCCCCCC
Confidence 8999999999998 8899865333456889999999877999999999999999999995 89999999999889888
Q ss_pred CCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccceee
Q 043883 274 LNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPV 332 (348)
Q Consensus 274 ~~Hav~iVGyg~~~~g~~yWiikNSWG~~WGe~GY~~i~~~~~~~~~~Cgi~~~~~~p~ 332 (348)
++|||+|||||++ +|.+|||||||||++|||+|||||+|+.+...|.|||+++++||+
T Consensus 157 ~~HaV~iVGyg~~-~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~n~Cgi~~~~~~p~ 214 (216)
T 1ppo_A 157 VDHAVTAVGYGKS-GGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPT 214 (216)
T ss_dssp CCEEEEEEEEEEE-TTEEEEEEECSBCSSSTBTTEEEEECCCSSSSCGGGTTSCCEEEE
T ss_pred CCEEEEEEEeecc-CCccEEEEEeCCCCCcccCcEEEEEcCCCCCCCcCccccceeeEe
Confidence 9999999999985 799999999999999999999999999754457899999999998
No 18
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1
Probab=100.00 E-value=4.7e-60 Score=425.53 Aligned_cols=204 Identities=49% Similarity=0.953 Sum_probs=187.5
Q ss_pred CCCceecccCCCCCcccccccc-------HHHHHHHHHHHHcCCCcCCCHHHHHhhcCCCCCCCCCCCchhHHHHHHHHc
Q 043883 123 VPPSVNWIEKGAVTPVKYQGQC-------AVAAVEGINAIKINRLVSLSEQQLVDCATNDNNNGCYGGFMDDAFKYIIQN 195 (348)
Q Consensus 123 lP~~~Dwr~~g~v~pv~dQg~C-------a~~~~e~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~ 195 (348)
||++||||++|+|+||||||.| +++++|++++|++++.+.||+|+|+||+.. +.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~~e~~~~i~~g~~~~lS~q~l~dC~~~--~~gC~GG~~~~a~~~~~~~ 78 (215)
T 1iwd_A 1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDTA--SHGCNGGWMNNAFQYIITN 78 (215)
T ss_dssp CCSCEEGGGGTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT--SCTTBCCCHHHHHHHHHHH
T ss_pred CCCcEeCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHhcCCccccChhHeEECcCC--CCCCCCCCHHHHHHHHHHh
Confidence 7999999999999999999876 678899999999999999999999999863 7899999999999999987
Q ss_pred CCCCCCCcccccCCcCCCCCCcccCCccEEEeeeEecCCCCHHHHHHHHHcCCeEEEEecC--ccccccCceEcCCCCCC
Q 043883 196 KGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVANQPVSVAIDAS--ALQFYSGGVFNGYCETF 273 (348)
Q Consensus 196 ~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~GPV~v~i~~~--~f~~Y~~Giy~~~c~~~ 273 (348)
+|+++|++|||.+. .+.|.... ...+++.+|..++..++++||++|++|||+|+|++. +|++|++|||+.+|+..
T Consensus 79 ~Gi~~e~~yPY~~~-~~~C~~~~--~~~~~i~~~~~v~~~~~~~ik~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~c~~~ 155 (215)
T 1iwd_A 79 GGIDTQQNYPYSAV-QGSCKPYR--LRVVSINGFQRVTRNNESALQSAVASQPVSVTVEAAGAPFQHYSSGIFTGPCGTA 155 (215)
T ss_dssp TCBCBTTTSCCCSS-CCCCCTTC--CCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCCC
T ss_pred CCcccccccCccCC-CCCCCCCC--CceEEeCcEEEeCCCcHHHHHHHHHhCCEEEEEecCCcchhhcCCceECCCCCCc
Confidence 79999999999998 88998752 356789999999878899999999999999999998 69999999999889888
Q ss_pred CCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccceee
Q 043883 274 LNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPV 332 (348)
Q Consensus 274 ~~Hav~iVGyg~~~~g~~yWiikNSWG~~WGe~GY~~i~~~~~~~~~~Cgi~~~~~~p~ 332 (348)
++|||+|||||++ +|++|||||||||++|||+|||||+|+.+...|.|||+++++||+
T Consensus 156 ~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~ 213 (215)
T 1iwd_A 156 QNHGVVIVGYGTQ-SGKNYWIVRNSWGQNWGNQGYIWMERNVASSAGLCGIAQLPSYPT 213 (215)
T ss_dssp CCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEE
T ss_pred CCEEEEEEEEecc-CCccEEEEEeCCCCCcCCCcEEEEEcCCCCCCCCCCccccceeee
Confidence 9999999999985 899999999999999999999999999754447899999999998
No 19
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E*
Probab=100.00 E-value=4.8e-60 Score=426.43 Aligned_cols=205 Identities=48% Similarity=0.904 Sum_probs=187.6
Q ss_pred CCCceecccCCCCCcccccccc-------HHHHHHHHHHHHcCCCcCCCHHHHHhhcCCCCCCCCCCCchhHHHHHHHHc
Q 043883 123 VPPSVNWIEKGAVTPVKYQGQC-------AVAAVEGINAIKINRLVSLSEQQLVDCATNDNNNGCYGGFMDDAFKYIIQN 195 (348)
Q Consensus 123 lP~~~Dwr~~g~v~pv~dQg~C-------a~~~~e~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~ 195 (348)
||++||||++|+|+||||||.| +++++|++++|++++.+.||+|+|+||+. .+.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~~~~~~ 78 (218)
T 1yal_A 1 YPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDK--HSYGCKGGYQTTSLQYVANN 78 (218)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHH
T ss_pred CCCcCcCCCCCCCCCCccCccchhHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhcC--CCCCCCCCCHHHHHHHHHHc
Confidence 7999999999999999999876 67889999999999999999999999984 48899999999999999987
Q ss_pred CCCCCCCcccccCCcCCCCCCcccCCccEEEeeeEecCCCCHHHHHHHHHcCCeEEEEecC--ccccccCceEcCCCCCC
Q 043883 196 KGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVANQPVSVAIDAS--ALQFYSGGVFNGYCETF 273 (348)
Q Consensus 196 ~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~GPV~v~i~~~--~f~~Y~~Giy~~~c~~~ 273 (348)
|+++|++|||.+. .+.|.........+++.+|..++..++++||++|++|||+|+|+++ +|++|++|||+.+|+..
T Consensus 79 -Gi~~e~~yPY~~~-~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~~~~~ 156 (218)
T 1yal_A 79 -GVHTSKVYPYQAK-QYKCRATDKPGPKVKITGYKRVPSNCETSFLGALANQPLSVLVEAGGKPFQLYKSGVFDGPCGTK 156 (218)
T ss_dssp -CBCBTTTSCCCSS-CCCCCGGGCCSCCBCCSEEEECCSSBHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCSCCSC
T ss_pred -CCCccccccccCC-CCCcccCcCCCceEEEeeEEEeCCCCHHHHHHHHHhCCEEEEEeccchhccccCCceECCCCCCC
Confidence 8999999999998 8899875333456889999999877899999999999999999995 89999999999889888
Q ss_pred CCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccceee
Q 043883 274 LNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPV 332 (348)
Q Consensus 274 ~~Hav~iVGyg~~~~g~~yWiikNSWG~~WGe~GY~~i~~~~~~~~~~Cgi~~~~~~p~ 332 (348)
++|||+|||||++ +|++|||||||||++|||+|||||+|+.++..|.|||+++++||+
T Consensus 157 ~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~ 214 (218)
T 1yal_A 157 LDHAVTAVGYGTS-DGKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQGTCGVYKSSYYPF 214 (218)
T ss_dssp CCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECCCSBSCCGGGTTSSCEEEE
T ss_pred CCEEEEEEEeecc-CCccEEEEEeCCCCCcccCcEEEEECCCCCCCCccccccceeeEE
Confidence 9999999999985 799999999999999999999999999754447899999999999
No 20
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0
Probab=100.00 E-value=8.9e-60 Score=425.85 Aligned_cols=204 Identities=50% Similarity=0.951 Sum_probs=182.4
Q ss_pred CCCceecccCCCCCcccccccc-------HHHHHHHHHHHHcCCCcCCCHHHHHhhcCCCCCCCCCCCchhHHHHHHHHc
Q 043883 123 VPPSVNWIEKGAVTPVKYQGQC-------AVAAVEGINAIKINRLVSLSEQQLVDCATNDNNNGCYGGFMDDAFKYIIQN 195 (348)
Q Consensus 123 lP~~~Dwr~~g~v~pv~dQg~C-------a~~~~e~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~ 195 (348)
||++||||++|+|+||||||.| +++++|++++|++++.+.||+|+|+||+.. +.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGSCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~--~~gC~GG~~~~a~~~~~~~ 78 (222)
T 3u8e_A 1 APASIDWRKKGAVTSVKDQGACGMCWAFGATGAIEGIDAITTGRLISVSEQQIVDCDTX--XXXXXGGDADDAFRWVITN 78 (222)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSCSSCTTTTHHHHHHHHHHHHHSCCCCBCHHHHHHHCC--------CCCHHHHHHHHHHH
T ss_pred CCCcCcCCcCCCCCCcccCCCCccHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhccCc--ccccCCCCHHHHHHHHHHc
Confidence 7999999999999999999876 788999999999999999999999999974 8899999999999999987
Q ss_pred CCCCCCCcccccCCcCCCCCCcccCCccEEEeeeEecCCCCHHHHHHHHHcCCeEEEEecC--ccccccC-ceEcC-CCC
Q 043883 196 KGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVANQPVSVAIDAS--ALQFYSG-GVFNG-YCE 271 (348)
Q Consensus 196 ~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~GPV~v~i~~~--~f~~Y~~-Giy~~-~c~ 271 (348)
+||++|++|||.+. .+.|..... ..+++.+|..++ .++++||++|++|||+|+|+++ +|++|++ |||+. +|+
T Consensus 79 ~Gi~~e~~yPY~~~-~~~C~~~~~--~~~~i~~~~~v~-~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~~Giy~~~~~~ 154 (222)
T 3u8e_A 79 GGIASDANYPYTGV-DGTCDLNKP--IAARIDGYTNVP-NSSSALLDAVAKQPVSVNIYTSSTSFQLYTGPGIFAGSSCS 154 (222)
T ss_dssp TCBCBTTTSCCCSS-CCCCCCCSC--CCBCCCEEEECC-SCHHHHHHHHHHSCEEEEECCCSHHHHTCCCSSCBCCTTCC
T ss_pred CCccchhcCCCccc-CCccccCCC--CeEEEccEEEeC-CcHHHHHHHHhCCCEEEEEEecChhhhcEeCCceECCCccc
Confidence 79999999999998 889987532 278899999998 7999999999999999999997 8999999 99998 687
Q ss_pred C---CCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccceee
Q 043883 272 T---FLNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPV 332 (348)
Q Consensus 272 ~---~~~Hav~iVGyg~~~~g~~yWiikNSWG~~WGe~GY~~i~~~~~~~~~~Cgi~~~~~~p~ 332 (348)
. .++|||+|||||++.+|++|||||||||++|||+|||||+|+.+++.|+|||+++++||+
T Consensus 155 ~~~~~~~HaV~iVGyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~g~Cgi~~~~~~p~ 218 (222)
T 3u8e_A 155 DDPATVDHTVLIVGYGSNGTNADYWIVKNSWGTEWGIDGYILIRRNTNRPDGVCAIDAWGSYPT 218 (222)
T ss_dssp CCGGGCCEEEEEEEEEESSTTCEEEEEECSBCTTSTBTTEEEEECSCSCTTCGGGTTSSCEEEE
T ss_pred CCCCcCCEEEEEEEEeecCCCCcEEEEECCCCCCcccCCEEEEEcCCCCCCCcCCccccceEEE
Confidence 6 689999999999863389999999999999999999999999875567999999999999
No 21
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ...
Probab=100.00 E-value=2.7e-59 Score=419.84 Aligned_cols=201 Identities=45% Similarity=0.844 Sum_probs=183.9
Q ss_pred CCCceecccCCCCCcccccccc-------HHHHHHHHHHHHcCCCcCCCHHHHHhhcCCCCCCCCCCCchhHHHHHHHHc
Q 043883 123 VPPSVNWIEKGAVTPVKYQGQC-------AVAAVEGINAIKINRLVSLSEQQLVDCATNDNNNGCYGGFMDDAFKYIIQN 195 (348)
Q Consensus 123 lP~~~Dwr~~g~v~pv~dQg~C-------a~~~~e~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~ 195 (348)
||++||||++|+|+||||||.| +++++|++++|++++.+.||||+|+||+. .+.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~CGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~yi~~~ 78 (212)
T 2cio_A 1 IPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNQYSEQELLDCDR--RSYGCNGGYPWSALQLVAQY 78 (212)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHT
T ss_pred CCCcccCCCCCCCCCCccCCccchHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhCC--CCCCCCCCCHHHHHHHHHHh
Confidence 7999999999999999999876 67889999999999999999999999986 47899999999999999987
Q ss_pred CCCCCCCcccccCCcCCCCCCcccCCccEEEeeeEecCCCCHHHHHHHHHcCCeEEEEecC--ccccccCceEcCCCCCC
Q 043883 196 KGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVANQPVSVAIDAS--ALQFYSGGVFNGYCETF 273 (348)
Q Consensus 196 ~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~GPV~v~i~~~--~f~~Y~~Giy~~~c~~~ 273 (348)
|+++|++|||.+. .+.|.........+++++|..++..++++||++|++|||+|+|+++ +|++|++|||+.+|+..
T Consensus 79 -Gi~~e~~yPY~~~-~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~~~~~ 156 (212)
T 2cio_A 79 -GIHYRNTYPYEGV-QRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGIFVGPCGNK 156 (212)
T ss_dssp -CBCBTTTSCCCSS-CCCCCTTTTCSCSBCCSEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCSC
T ss_pred -CcCcccccCCcCC-CCCcCCCCCCCceEEEeeEEEeCCccHHHHHHHHHhCCEEEEEeccCcchhhcCCceecCCCCCC
Confidence 8999999999998 8899875323456889999999877899999999999999999997 79999999999889888
Q ss_pred CCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccceee
Q 043883 274 LNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPV 332 (348)
Q Consensus 274 ~~Hav~iVGyg~~~~g~~yWiikNSWG~~WGe~GY~~i~~~~~~~~~~Cgi~~~~~~p~ 332 (348)
++|||+|||||+ +|||||||||++|||+|||||+|+.+...|+|||+++++||+
T Consensus 157 ~~HaV~iVGyg~-----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~ 210 (212)
T 2cio_A 157 VDHAVAAVGYGP-----NYILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPV 210 (212)
T ss_dssp CCEEEEEEEEET-----TEEEEECSBCTTSTBTTEEEEECSSSCTTCGGGTTSCCEEEE
T ss_pred CCEEEEEEEecC-----CeEEEEeCCCCCcccCcEEEEEcCCCCCCCccCcccceeEEE
Confidence 899999999996 699999999999999999999999754457899999999998
No 22
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ...
Probab=100.00 E-value=3.1e-59 Score=421.85 Aligned_cols=204 Identities=48% Similarity=0.881 Sum_probs=184.1
Q ss_pred CCCceecccCCCCCcccccccc-------HHHHHHHHHHHHcCCCcCCCHHHHHhhcCCCCCCCCCCCchhHHHHHHHHc
Q 043883 123 VPPSVNWIEKGAVTPVKYQGQC-------AVAAVEGINAIKINRLVSLSEQQLVDCATNDNNNGCYGGFMDDAFKYIIQN 195 (348)
Q Consensus 123 lP~~~Dwr~~g~v~pv~dQg~C-------a~~~~e~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~ 195 (348)
||++||||++|+|+||||||.| +++++|+++++++++.+.||+|+|+||+..+++.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~g~~gC~GG~~~~a~~y~~~~ 80 (220)
T 2xu3_A 1 APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDN 80 (220)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTTTCCTTBCCCHHHHHHHHHHH
T ss_pred CCCcEeCCCCCCCCCCcccCcccHHHHHHhHHHHHHHHHHhcCCceecCHHHHHhhccCCCCCCCCCCCHHHHHHHHHHh
Confidence 7999999999999999999876 678899999999999999999999999975558899999999999999755
Q ss_pred CCCCCCCcccccCCcCCCCCCcccCCccEEEeeeEecCCCCHHHHHHHHH-cCCeEEEEecC--ccccccCceEcCC-CC
Q 043883 196 KGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVA-NQPVSVAIDAS--ALQFYSGGVFNGY-CE 271 (348)
Q Consensus 196 ~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~-~GPV~v~i~~~--~f~~Y~~Giy~~~-c~ 271 (348)
.|+++|++|||.+. .+.|.... ....+++++|..++. ++++||++|+ +|||+|+|++. +|++|++|||..+ |+
T Consensus 81 ~Gi~~e~~yPY~~~-~~~C~~~~-~~~~~~i~~~~~v~~-~~~~ik~~l~~~GPV~v~~~~~~~~f~~Y~~Gvy~~~~c~ 157 (220)
T 2xu3_A 81 GGLDSEESYPYEAT-EESCKYNP-KYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCS 157 (220)
T ss_dssp TCEEBTTTSCCCSS-CCCCCCCG-GGEEECCSEEEECCS-CHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTCC
T ss_pred CCcccccccCCccc-CcCccCCC-CCcceeeeeEEEeCC-CHHHHHHHHHhcCCEEEEEeecCcccccccceEEcCCCCC
Confidence 69999999999998 88998652 345678999999986 8999999999 69999999997 7999999999875 87
Q ss_pred C-CCCeEEEEEEeee---cCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccceee
Q 043883 272 T-FLNHGVTAVGYGT---SEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPV 332 (348)
Q Consensus 272 ~-~~~Hav~iVGyg~---~~~g~~yWiikNSWG~~WGe~GY~~i~~~~~~~~~~Cgi~~~~~~p~ 332 (348)
. .++|||+|||||+ +++|++|||||||||++|||+|||||+|+.+ |+|||+++++||+
T Consensus 158 ~~~~~HaV~iVGygd~~~~~~g~~yWivkNSWG~~WG~~Gy~~i~~~~~---n~Cgi~~~~~~p~ 219 (220)
T 2xu3_A 158 SEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRR---NHCGIASAASYPT 219 (220)
T ss_dssp SSCCCEEEEEEEEEECCCSSSCCEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSCEEEE
T ss_pred CCCCCeEEEEEEcCCccccCCCCcEEEEEeCCCCCcccCcEEEEecCCC---CcCCccccceeee
Confidence 5 6899999999994 3578999999999999999999999999863 5799999999997
No 23
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1
Probab=100.00 E-value=3.6e-59 Score=419.35 Aligned_cols=201 Identities=47% Similarity=0.900 Sum_probs=184.6
Q ss_pred CCCceecccCCCCCcccccccc-------HHHHHHHHHHHHcCCCcCCCHHHHHhhcCCCCCCCCCCCchhHHHHHHHHc
Q 043883 123 VPPSVNWIEKGAVTPVKYQGQC-------AVAAVEGINAIKINRLVSLSEQQLVDCATNDNNNGCYGGFMDDAFKYIIQN 195 (348)
Q Consensus 123 lP~~~Dwr~~g~v~pv~dQg~C-------a~~~~e~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~ 195 (348)
||++||||++|+|+||||||.| +++++|+++++++++.+.||||+|+||+. .+.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~~~~~~ 78 (213)
T 3ioq_A 1 IPTSIDWRQKGAVTPVRNQGGCGSCWTFSSVAAVEGINKIVTGQLLSLSEQELLDCER--RSYGCRGGFPLYALQYVANS 78 (213)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHH
T ss_pred CCCCCCcccCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCcccCHHHhhhhcC--CCCCCCCCCHHHHHHHHHHc
Confidence 7999999999999999999876 67889999999999999999999999997 48899999999999999998
Q ss_pred CCCCCCCcccccCCcCCCCCCcccCCccEEEeeeEecCCCCHHHHHHHHHcCCeEEEEecC--ccccccCceEcCCCCCC
Q 043883 196 KGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVANQPVSVAIDAS--ALQFYSGGVFNGYCETF 273 (348)
Q Consensus 196 ~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~GPV~v~i~~~--~f~~Y~~Giy~~~c~~~ 273 (348)
|+++|++|||.+. .+.|.........+++.+|..++..+++.|+++|++|||+|+|+++ +|++|++|||..+|+..
T Consensus 79 -Gi~~e~~yPY~~~-~~~C~~~~~~~~~~~i~~~~~v~~~~~~~~~~~~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~ 156 (213)
T 3ioq_A 79 -GIHLRQYYPYEGV-QRQCRASQAKGPKVKTDGVGRVPRNNEQALIQRIAIQPVSIVVEAKGRAFQNYRGGIFAGPCGTS 156 (213)
T ss_dssp -CEEBGGGSCCCSS-CCCCCGGGCCSCEECCCEEEECCSSCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCSCCSC
T ss_pred -CCCchhccCcCCC-CCCCCCCccCCceEEeccEEEeCCchHHHHHHHHHhCCEEEEEEechhhhhhccCCeEcCCCCCc
Confidence 9999999999998 8899875344567889999999877888888888899999999997 89999999999988888
Q ss_pred CCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccceee
Q 043883 274 LNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPV 332 (348)
Q Consensus 274 ~~Hav~iVGyg~~~~g~~yWiikNSWG~~WGe~GY~~i~~~~~~~~~~Cgi~~~~~~p~ 332 (348)
++|||+|||||+ +|||||||||++|||+|||||+|+.+.+.|+|||+++++||+
T Consensus 157 ~~HaV~iVGyg~-----~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~ 210 (213)
T 3ioq_A 157 IDHAVAAVGYGN-----DYILIKNSWGTGWGEGGYIRIKRGSGNPQGACGVLSDSVFPT 210 (213)
T ss_dssp CCEEEEEEEEET-----TEEEEECSBCTTSTBTTEEEEESSCSSTTCGGGTTSCCEEEE
T ss_pred cCceEEEEecCC-----CeEEEECCCCCCcccCCeEEEEcCCCCCCCcccccCcceEeE
Confidence 999999999996 599999999999999999999999864457899999999998
No 24
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A*
Probab=100.00 E-value=6.5e-59 Score=426.11 Aligned_cols=207 Identities=43% Similarity=0.887 Sum_probs=187.2
Q ss_pred CCCCceecccCCCCCcccccccc-------HHHHHHHHHHHHcCCCcCCCHHHHHhhcCCCCCCCCCCCchhHHHHHHHH
Q 043883 122 QVPPSVNWIEKGAVTPVKYQGQC-------AVAAVEGINAIKINRLVSLSEQQLVDCATNDNNNGCYGGFMDDAFKYIIQ 194 (348)
Q Consensus 122 ~lP~~~Dwr~~g~v~pv~dQg~C-------a~~~~e~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~ 194 (348)
+||++||||++|+|+||||||.| +++++|++++|++++.+.||+|+|+||+. ++.||+||++..|++|+.+
T Consensus 1 ~lP~~~DwR~~g~vtpVkdQg~CGsCWAfa~~~~lE~~~~i~~g~~~~LS~q~lvdC~~--~~~gC~GG~~~~a~~y~~~ 78 (246)
T 2b1m_A 1 DAPESWDWSKKGVITKVKFQGQCGSGWAFSATGAIEAAHAIATGNLVSLSEQELIDCVD--ESEGCYNGWHYQSFEWVVK 78 (246)
T ss_dssp -CCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSBTTTBCCHHHHHHHHHH
T ss_pred CCCCcCCCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhcC--CCCCCCCCCHHHHHHHHHH
Confidence 48999999999999999999876 67889999999999999999999999986 4789999999999999998
Q ss_pred cCCCCCCCcccccCCcCCCCCCcccCCccEEEeee---EecCCCCHHHHHHHHHc----CCeEEEEecCccccccCceEc
Q 043883 195 NKGITNDAVYSYEGMSTGICDSIKAEDHAAQITNY---EDVPPNDEESLLKAVAN----QPVSVAIDASALQFYSGGVFN 267 (348)
Q Consensus 195 ~~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~i~~~---~~v~~~~~~~lk~~l~~----GPV~v~i~~~~f~~Y~~Giy~ 267 (348)
++|+++|++|||.+. .+.|... .....+++++| ..++..++++||++|++ |||+|+|++.+|++|++|||+
T Consensus 79 ~~Gi~~e~~yPY~~~-~~~C~~~-~~~~~~~i~~y~~~~~v~~~~~~~ik~~l~~~~~~GPV~v~i~~~~f~~Y~~Giy~ 156 (246)
T 2b1m_A 79 HGGIASEADYPYKAR-DGKCKAN-EIQDKVTIDNYGVQILSNESTESEAESSLQSFVLEQPISVSIDAKDFHFYSGGIYD 156 (246)
T ss_dssp TTCBCBTTTSCCCSS-CCCCCGG-GCCCCBCCSEEEEEECCTTSCHHHHHHHHHHHHHHSCEEEEECCTTGGGCCSSEEC
T ss_pred hCCcCccccccccCC-CCcCcCC-CCCCceeEcCcceeeecCCChHHHHHHHHHhhccCCCEEEEEEcchhhcccceeec
Confidence 779999999999998 8899875 33456789999 88887799999999986 999999999899999999998
Q ss_pred C-CCCCC--CCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccceeee
Q 043883 268 G-YCETF--LNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPVS 333 (348)
Q Consensus 268 ~-~c~~~--~~Hav~iVGyg~~~~g~~yWiikNSWG~~WGe~GY~~i~~~~~~~~~~Cgi~~~~~~p~~ 333 (348)
. .|+.. ++|||+|||||++ +|++|||||||||++|||+|||||+|+.++..|.|||++.++||+.
T Consensus 157 ~~~c~~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~n~CgI~~~~~~p~~ 224 (246)
T 2b1m_A 157 GGNCSSPYGINHFVLIVGYGSE-DGVDYWIAKNSWGEDWGIDGYIRIQRNTGNLLGVCGMNYFASYPII 224 (246)
T ss_dssp CTTCCSSCCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECCSSCTTCGGGTTSEEEEEEC
T ss_pred CCCCCCCCcCceEEEEEEEecc-CCceEEEEEeCCCCcccCCcEEEEEcCCCCCCccccccceeeEEEe
Confidence 8 68765 8999999999986 8999999999999999999999999997444478999999999993
No 25
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ...
Probab=100.00 E-value=3.2e-59 Score=421.14 Aligned_cols=204 Identities=50% Similarity=0.919 Sum_probs=185.8
Q ss_pred CCCceecccCCCCCcccccccc-------HHHHHHHHHHHHcCCCcCCCHHHHHhhc-CCCCCCCCCCCchhHHHHHHHH
Q 043883 123 VPPSVNWIEKGAVTPVKYQGQC-------AVAAVEGINAIKINRLVSLSEQQLVDCA-TNDNNNGCYGGFMDDAFKYIIQ 194 (348)
Q Consensus 123 lP~~~Dwr~~g~v~pv~dQg~C-------a~~~~e~~~~i~~~~~~~lS~q~l~dC~-~~~~~~gC~GG~~~~a~~~~~~ 194 (348)
||++||||++|+|+||||||.| +++++|+++++++++.+.||+|+|+||+ ...++.||+||++..|++|+.+
T Consensus 2 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~~gC~GG~~~~a~~~~~~ 81 (218)
T 3ovx_A 2 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIID 81 (218)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGGTCCGGGCCCHHHHHHHHHH
T ss_pred CCCCCCcccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHcCCccccCHHHheeccCCcCCCCCCCCCCHHHHHHHHHH
Confidence 7999999999999999999876 6788999999999999999999999998 4445899999999999999987
Q ss_pred cCCCCCCCcccccCCcCCCCCCcccCCccEEEeeeEecCCCCHHHHHHHHH-cCCeEEEEecC--ccccccCceEcCC-C
Q 043883 195 NKGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVA-NQPVSVAIDAS--ALQFYSGGVFNGY-C 270 (348)
Q Consensus 195 ~~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~-~GPV~v~i~~~--~f~~Y~~Giy~~~-c 270 (348)
++|+++|++|||.+. .+.|... ......++.+|..++..++++||++|+ +|||+++|++. +|++|++|||..+ |
T Consensus 82 ~~Gi~~e~~yPY~~~-~~~C~~~-~~~~~~~i~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~~ 159 (218)
T 3ovx_A 82 NKGIDSDASYPYKAM-DQKCQYD-SKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSC 159 (218)
T ss_dssp HTCEEBTTTSCCCSS-CCCCCCC-GGGEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHHCCSSEECCTTC
T ss_pred hCCcCcccccCccCC-CCcccCC-CccceeeeccEEEeCCCCHHHHHHHHHhcCCEEEEEEecchhhhcccCceecCCCC
Confidence 679999999999998 8899875 334567889999998779999999999 69999999997 7999999999874 8
Q ss_pred CCCCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccceee
Q 043883 271 ETFLNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPV 332 (348)
Q Consensus 271 ~~~~~Hav~iVGyg~~~~g~~yWiikNSWG~~WGe~GY~~i~~~~~~~~~~Cgi~~~~~~p~ 332 (348)
...++|||+|||||++ +|++|||||||||++|||+|||||+|+.+ |.|||++.++||+
T Consensus 160 ~~~~~HaV~iVGyg~~-~g~~ywivkNSWG~~WG~~Gy~~i~~~~~---n~cgi~~~~~~p~ 217 (218)
T 3ovx_A 160 TQNVNHGVLVVGYGDL-NGKEYWLVKNSWGHNFGEEGYIRMARNKG---NHCGIASFPSYPE 217 (218)
T ss_dssp CSCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSCEEEE
T ss_pred CcccCcEEEEEEEecc-CCceEEEEECCCCCccccCCEEEEecCCC---CcccccCceeeee
Confidence 7789999999999985 79999999999999999999999999862 5799999999997
No 26
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ...
Probab=100.00 E-value=5.5e-59 Score=418.76 Aligned_cols=202 Identities=49% Similarity=0.899 Sum_probs=184.8
Q ss_pred CCCceecccCCCCCcccccccc-------HHHHHHHHHHHHcCCCcCCCHHHHHhhcCCCCCCCCCCCchhHHHHHHHHc
Q 043883 123 VPPSVNWIEKGAVTPVKYQGQC-------AVAAVEGINAIKINRLVSLSEQQLVDCATNDNNNGCYGGFMDDAFKYIIQN 195 (348)
Q Consensus 123 lP~~~Dwr~~g~v~pv~dQg~C-------a~~~~e~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~ 195 (348)
||++||||++|+|+||||||.| +++++|+++++++++.+.||+|+|+||+. .+.||+||++..|++|+.++
T Consensus 1 lP~~~Dwr~~~~v~pvkdQg~cGsCWAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~--~~~gC~GG~~~~a~~~~~~~ 78 (215)
T 3kwz_A 1 APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--ENDGCGGGYMTNAFQYVQKN 78 (215)
T ss_dssp CTTCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHH
T ss_pred CCCCCccCcCCCCCCcccCCCCcHHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcC--CCCCCCCCCHHHHHHHHHHh
Confidence 7999999999999999999876 67889999999999999999999999997 48899999999999999887
Q ss_pred CCCCCCCcccccCCcCCCCCCcccCCccEEEeeeEecCCCCHHHHHHHHH-cCCeEEEEecC--ccccccCceEcCC-CC
Q 043883 196 KGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVA-NQPVSVAIDAS--ALQFYSGGVFNGY-CE 271 (348)
Q Consensus 196 ~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~-~GPV~v~i~~~--~f~~Y~~Giy~~~-c~ 271 (348)
+|+++|++|||.+. .+.|... ......++++|..++..++++||++|+ +|||+|+|++. +|++|++|||..+ |.
T Consensus 79 ~Gi~~e~~yPY~~~-~~~C~~~-~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~ 156 (215)
T 3kwz_A 79 RGIDSEDAYPYVGQ-EESCMYN-PTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCN 156 (215)
T ss_dssp TCEEBTTTSCCCSS-CCCCCCC-GGGEEECCCCEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTCC
T ss_pred CCccccccCCCccC-CCccccC-CCCceeEecceEEeCCCCHHHHHHHHHHCCCEEEEEeechhhhhcccCCeECCCCCC
Confidence 89999999999998 8899865 334567899999998779999999998 79999999997 8999999999874 74
Q ss_pred -CCCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccceee
Q 043883 272 -TFLNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPV 332 (348)
Q Consensus 272 -~~~~Hav~iVGyg~~~~g~~yWiikNSWG~~WGe~GY~~i~~~~~~~~~~Cgi~~~~~~p~ 332 (348)
..++|||+|||||++ +|++|||||||||++|||+|||||+|+.+ |+|||++.++||+
T Consensus 157 ~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WG~~Gy~~i~r~~~---n~Cgi~~~~~~p~ 214 (215)
T 3kwz_A 157 SDNLNHAVLAVGYGIQ-KGNKHWIIKNSWGENWGNKGYILMARNKN---NACGIANLASFPK 214 (215)
T ss_dssp TTCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEESSSS---SGGGTTSSCEEEC
T ss_pred CChhhCEEEEEEEecc-CCceEEEEECCcCcccccCCEEEEecCCC---CccCcCCceeeee
Confidence 468999999999985 89999999999999999999999999963 5799999999997
No 27
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana}
Probab=100.00 E-value=5.7e-59 Score=418.19 Aligned_cols=201 Identities=48% Similarity=0.936 Sum_probs=184.5
Q ss_pred CCCceecccCCCCCcccccccc-------HHHHHHHHHHHHcCCCcCCCHHHHHhhcCCCCCCCCCCCchhHHHHHHHHc
Q 043883 123 VPPSVNWIEKGAVTPVKYQGQC-------AVAAVEGINAIKINRLVSLSEQQLVDCATNDNNNGCYGGFMDDAFKYIIQN 195 (348)
Q Consensus 123 lP~~~Dwr~~g~v~pv~dQg~C-------a~~~~e~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~ 195 (348)
||++||||++|+|+||||||.| +++++|++++|++++.+.||+|+|+||+. .+.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~y~~~~ 78 (214)
T 2bdz_A 1 YPESIDWREKGAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCER--RSHGCDGGYQTTSLQYVVDN 78 (214)
T ss_dssp CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCBCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHH
T ss_pred CCCcEeCCCCCCCCCCccCCCCccHHHHHhHHHHHHHHHHhcCCccccCHHHHHhhcC--CCCCCCCCCHHHHHHHHHHh
Confidence 7999999999999999999876 67889999999999999999999999986 47899999999999999998
Q ss_pred CCCCCCCcccccCCcCCCCCCcccCCccEEEeeeEecCCCCHHHHHHHHHcCCeEEEEecC--ccccccCceEcCCCCCC
Q 043883 196 KGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVANQPVSVAIDAS--ALQFYSGGVFNGYCETF 273 (348)
Q Consensus 196 ~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~GPV~v~i~~~--~f~~Y~~Giy~~~c~~~ 273 (348)
|+++|++|||.+. .+.|.........+++++|..++..++++||++|++|||+|+|++. +|++|++|||+.+|+..
T Consensus 79 -Gi~~e~~yPY~~~-~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~gPV~v~i~~~~~~f~~Y~~Giy~~~~~~~ 156 (214)
T 2bdz_A 79 -GVHTEREYPYEKK-QGRCRAKDKKGPKVYITGYKYVPANDEISLIQAIANQPVSVVTDSRGRGFQFYKGGIYEGPCGTN 156 (214)
T ss_dssp -CEEBTTTSCCCSS-CCCCCTTTCCSCEECCCEEEEECSSBHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCSCCSC
T ss_pred -CCCccccCCCCCC-CCCCCCCCCCCceeeecCEEEeCCCcHHHHHHHHHhCCEEEEEeeChhHhhcccCceecCCCCCC
Confidence 9999999999998 8889875333456889999999878899999999999999999997 89999999999989888
Q ss_pred CCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccceee
Q 043883 274 LNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPV 332 (348)
Q Consensus 274 ~~Hav~iVGyg~~~~g~~yWiikNSWG~~WGe~GY~~i~~~~~~~~~~Cgi~~~~~~p~ 332 (348)
++|||+|||||+ +|||||||||++|||+|||||+|+.++..|+|||++.++||+
T Consensus 157 ~~HaV~iVGyg~-----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~ 210 (214)
T 2bdz_A 157 TDHAVTAVGYGK-----TYLLLKNSWGPNWGEKGYIRIKRASGRSKGTCGVYTSSFFPI 210 (214)
T ss_dssp CCEEEEEEEECS-----SEEEEECSBCTTSTBTTEEEEECCCSBSSCGGGTTSCEEEEE
T ss_pred CCeEEEEEEcCC-----CeEEEEeCCCCCcccCCEEEEEcCCCCCCCcccccccceEEE
Confidence 999999999996 699999999999999999999999754447899999999999
No 28
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A*
Probab=100.00 E-value=9.2e-59 Score=415.07 Aligned_cols=197 Identities=50% Similarity=0.933 Sum_probs=181.3
Q ss_pred CCCceecccCCCCCcccccccc-------HHHHHHHHHHHHcCCCcCCCHHHHHhhcCCCCCCCCCCCchhHHHHHHHHc
Q 043883 123 VPPSVNWIEKGAVTPVKYQGQC-------AVAAVEGINAIKINRLVSLSEQQLVDCATNDNNNGCYGGFMDDAFKYIIQN 195 (348)
Q Consensus 123 lP~~~Dwr~~g~v~pv~dQg~C-------a~~~~e~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~ 195 (348)
||++||||++|+|+||||||.| +++++|++++|++++.+.||||+|+||+. .+.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~y~~~~ 78 (208)
T 1o0e_A 1 LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDK--KNHGCLGGAFVFAYQYIINN 78 (208)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHH
T ss_pred CCCcCcCCCCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCceecCHHHhhhhcC--CCCCCCCCCHHHHHHHHHHh
Confidence 7999999999999999999876 67889999999999999999999999985 47899999999999999987
Q ss_pred CCCCCCCcccccCCcCCCCCCcccCCccEEEeeeEecCCCCHHHHHHHHHcCCeEEEEecC--ccccccCceEcCCCCCC
Q 043883 196 KGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVANQPVSVAIDAS--ALQFYSGGVFNGYCETF 273 (348)
Q Consensus 196 ~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~GPV~v~i~~~--~f~~Y~~Giy~~~c~~~ 273 (348)
+|+++|++|||.+. .+.|+. ....+++.+|..++..++++||++|++|||+|+|+++ +|++|++|||+.+|+..
T Consensus 79 ~Gi~~e~~yPY~~~-~~~C~~---~~~~~~i~~~~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~c~~~ 154 (208)
T 1o0e_A 79 GGIDTQANYPYKAV-QGPCQA---ASKVVSIDGYNGVPFCNEXALKQAVAVQPSTVAIDASSAQFQQYSSGIFSGPCGTK 154 (208)
T ss_dssp TCBCBTTTSCCCSS-CCCCCC---CCCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCSC
T ss_pred CCcCcccccCccCC-CCcCCC---CCceEEeCeEEEeCCCCHHHHHHHHHhCCEEEEEEccCcccccccCceECCCCCCc
Confidence 79999999999998 889976 2356789999999877899999999999999999997 79999999999889888
Q ss_pred CCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccceee
Q 043883 274 LNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPV 332 (348)
Q Consensus 274 ~~Hav~iVGyg~~~~g~~yWiikNSWG~~WGe~GY~~i~~~~~~~~~~Cgi~~~~~~p~ 332 (348)
++|||+|||||+ +|||||||||++|||+|||||+|+.+ .|.|||++.++||+
T Consensus 155 ~~HaV~iVGyg~-----~yWivkNSWG~~WGe~Gy~~i~~~~~--~~~Cgi~~~~~~p~ 206 (208)
T 1o0e_A 155 LNHGVTIVGYQA-----NYWIVRNSWGRYWGEKGYIRMLRVGG--CGLCGIARLPYYPT 206 (208)
T ss_dssp CCEEEEEEEECS-----SEEEEECSBCTTSTBTTEEEEECCST--TCGGGTTSSCEEEE
T ss_pred CCEEEEEEEeCC-----CeEEEEcCCCCcccCCcEEEEEcCCC--CCcCCCcccceeee
Confidence 999999999996 69999999999999999999999863 26799999999998
No 29
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A*
Probab=100.00 E-value=4.9e-59 Score=420.50 Aligned_cols=204 Identities=44% Similarity=0.877 Sum_probs=186.1
Q ss_pred CCCceecccCC-CCCcccccccc-------HHHHHHHHHHHHcCCCcCCCHHHHHhhcCCCCCCCCCCCchhHHHHHHHH
Q 043883 123 VPPSVNWIEKG-AVTPVKYQGQC-------AVAAVEGINAIKINRLVSLSEQQLVDCATNDNNNGCYGGFMDDAFKYIIQ 194 (348)
Q Consensus 123 lP~~~Dwr~~g-~v~pv~dQg~C-------a~~~~e~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~ 194 (348)
||++||||++| +|+||||||.| +++++|+++++++++.+.||+|+|+||+...++.||+||++..|++|+.+
T Consensus 1 lP~~~DwR~~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~ 80 (220)
T 8pch_A 1 YPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRY 80 (220)
T ss_dssp CCSCEEHHHHSSCSCCCCBCTTSCCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHGGGGTCCGGGCCCHHHHHHHHHH
T ss_pred CCCCEecCcCCCcCCcccccCCCchHHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhCcCccCCCCCCCCCHHHHHHHHHH
Confidence 79999999998 89999999876 78889999999999999999999999987556889999999999999998
Q ss_pred cCCCCCCCcccccCCcCCCCCCcccCCccEEEeeeEecCCCCHHHHHHHHH-cCCeEEEEecC-ccccccCceEcCC-CC
Q 043883 195 NKGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVA-NQPVSVAIDAS-ALQFYSGGVFNGY-CE 271 (348)
Q Consensus 195 ~~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~-~GPV~v~i~~~-~f~~Y~~Giy~~~-c~ 271 (348)
++|+++|++|||.+. .+.|... ......++.+|..++..++++||++|+ +|||+++|++. +|++|++|||..+ |.
T Consensus 81 ~~Gi~~e~~yPY~~~-~~~C~~~-~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~~~~~~~~~f~~Y~~Giy~~~~~~ 158 (220)
T 8pch_A 81 NKGIMGEDTYPYKGQ-DDHCKFQ-PDKAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTSCH 158 (220)
T ss_dssp HTCEEBTTTSCCCSS-CCCCCCC-GGGEEECEEEEEECCTTCHHHHHHHHHHTCCEEEEECCCHHHHTCCSSEECCSSCC
T ss_pred cCCcCcccccCccCC-CCCCCCC-CCcceEEeCCEEEeCCCCHHHHHHHHHhcCCEEEEEEeccchhhcCCCcccCCcCC
Confidence 779999999999998 8899875 334567899999998889999999998 79999999999 9999999999874 75
Q ss_pred C---CCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccceeee
Q 043883 272 T---FLNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPVS 333 (348)
Q Consensus 272 ~---~~~Hav~iVGyg~~~~g~~yWiikNSWG~~WGe~GY~~i~~~~~~~~~~Cgi~~~~~~p~~ 333 (348)
. .++|||+|||||++ +|.+|||||||||++|||+|||||+|+. |+|||+++++||++
T Consensus 159 ~~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~r~~----n~cgi~~~~~~~~p 218 (220)
T 8pch_A 159 KTPDKVNHAVLAVGYGEE-NGIPYWIVKNSWGPQWGMNGYFLIERGK----NMCGLAACASYPIP 218 (220)
T ss_dssp CSTTTCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTTSCEEEEE
T ss_pred CCCCcCCcEEEEEEEEcc-CCeeEEEEECCCCcCcccCCEEEEEcCC----CccccCCCceeEee
Confidence 3 58999999999985 8999999999999999999999999985 57999999999993
No 30
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A
Probab=100.00 E-value=8.3e-59 Score=424.39 Aligned_cols=206 Identities=38% Similarity=0.710 Sum_probs=186.6
Q ss_pred CCCCCceecccCCCCCcccccccc-------HHHHHHHHHHHHcCCCcCCCHHHHHhhcCCCCCCCCCCCchhHHHHHHH
Q 043883 121 SQVPPSVNWIEKGAVTPVKYQGQC-------AVAAVEGINAIKINRLVSLSEQQLVDCATNDNNNGCYGGFMDDAFKYII 193 (348)
Q Consensus 121 ~~lP~~~Dwr~~g~v~pv~dQg~C-------a~~~~e~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~ 193 (348)
.+||++||||++|+|+||||||.| +++++|++++|++++.+.||+|+|+||+.. +.||+||++..|++|+.
T Consensus 16 ~~lP~~~DwR~~~~vtpVkdQg~CGsCWAFaa~~alE~~~~i~~~~~~~lSeq~l~dC~~~--~~gC~GG~~~~a~~yi~ 93 (241)
T 2oul_A 16 NFDHAAYDWRLHSGVTPVKDQKNCGSCWAFSSIGSVESQYAIRKNKLITLSEQELVDCSFK--NYGCNGGLINNAFEDMI 93 (241)
T ss_dssp CCCSSCEEGGGTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHCTT--SCTTBCBCHHHHHHHHH
T ss_pred ccCCCccccCcCCCCCCCccCccchHHHHHHHHHHHHHHHHHhcCCCcccCHHHHHhhcCC--CCCCCCCCHHHHHHHHH
Confidence 479999999999999999999876 678899999999999999999999999864 78999999999999999
Q ss_pred HcCCCCCCCcccccCCcCCC-CCCcccCCccEEEeeeEecCCCCHHHHHHHHHcCCeEEEEecC-ccccccCceEcCCCC
Q 043883 194 QNKGITNDAVYSYEGMSTGI-CDSIKAEDHAAQITNYEDVPPNDEESLLKAVANQPVSVAIDAS-ALQFYSGGVFNGYCE 271 (348)
Q Consensus 194 ~~~Gi~~e~~yPY~~~~~~~-C~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~GPV~v~i~~~-~f~~Y~~Giy~~~c~ 271 (348)
+++|+++|++|||.+. .+. |... .....+++++|..++..++++||++| |||+|+|++. +|++|++|||+..|+
T Consensus 94 ~~~Gi~~e~~yPY~~~-~~~~C~~~-~~~~~~~i~~~~~v~~~~~~~ik~~l--GPV~v~i~~~~~f~~Y~~Giy~~~c~ 169 (241)
T 2oul_A 94 ELGGICPDGDYPYVSD-APNLCNID-RCTEKYGIKNYLSVPDNKLKEALRFL--GPISISVAVSDDFAFYKEGIFDGECG 169 (241)
T ss_dssp HTTSBCBTTSSCCCTT-SCCCCCTT-SSSCCBCCSEEEECCTTCHHHHHHHT--CCEEEEECBCHHHHTCCSSBCCSCBC
T ss_pred HhCCcCccccCCCcCC-CCCcCCCC-CCccceeeeeEEEeCCCCHHHHHHhh--CCEEEEEecCcchhhcCCcEEcCcCC
Confidence 8669999999999998 777 9865 23456889999999877899999999 9999999999 999999999988887
Q ss_pred CCCCeEEEEEEeeecC---------CCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccceee
Q 043883 272 TFLNHGVTAVGYGTSE---------EGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPV 332 (348)
Q Consensus 272 ~~~~Hav~iVGyg~~~---------~g~~yWiikNSWG~~WGe~GY~~i~~~~~~~~~~Cgi~~~~~~p~ 332 (348)
..++|||+|||||++. .|.+|||||||||++|||+|||||+|+.++..+.|||++.++||+
T Consensus 170 ~~~~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~ 239 (241)
T 2oul_A 170 DQLNHAVMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIETDESGLMRKCGLGTDAFIPL 239 (241)
T ss_dssp SSCCEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCGGGTTSSEEEEE
T ss_pred CCCCEEEEEEEeccccccccccccCCCCCEEEEEeCCCCCcccCCEEEEEcCCCCCCCcCCccceEEEEe
Confidence 7799999999999852 278999999999999999999999999765446699999999998
No 31
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0
Probab=100.00 E-value=5.5e-59 Score=421.32 Aligned_cols=209 Identities=43% Similarity=0.865 Sum_probs=189.4
Q ss_pred CCCCCceecccCCCCCcccccccc-------HHHHHHHHHHHHcCCCcCCCHHHHHhhcCCCCCCCCCCCchhHHHHHHH
Q 043883 121 SQVPPSVNWIEKGAVTPVKYQGQC-------AVAAVEGINAIKINRLVSLSEQQLVDCATNDNNNGCYGGFMDDAFKYII 193 (348)
Q Consensus 121 ~~lP~~~Dwr~~g~v~pv~dQg~C-------a~~~~e~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~ 193 (348)
.+||++||||++|+|+||||||.| +++++|+++++++++.+.||+|+|+||+...++.||+||++..|++|+.
T Consensus 5 ~~lP~~~Dwr~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gC~GG~~~~a~~~~~ 84 (224)
T 3f75_A 5 SELPAGVDWRSRGCVTPVKDQRDCGSCWAFSTTGALEGAHCAKTGKLVSLSEQELMDCSRAEGNQSCSGGEMNDAFQYVL 84 (224)
T ss_dssp GGSCSCEEHHHHTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGGGCBCHHHHHHHHH
T ss_pred cCCCCceecccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCCceeCHHHHhhcccCCCCCCCCCCCHHHHHHHHH
Confidence 479999999999999999999876 6788999999999999999999999998754589999999999999999
Q ss_pred HcCCCCCCCcccccCCcCCCCCCcccCCccEEEeeeEecCCCCHHHHHHHHHcCCeEEEEecC--ccccccCceEcCCCC
Q 043883 194 QNKGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVANQPVSVAIDAS--ALQFYSGGVFNGYCE 271 (348)
Q Consensus 194 ~~~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~GPV~v~i~~~--~f~~Y~~Giy~~~c~ 271 (348)
+++|+++|++|||.+. .+.|.... .....++.+|..++..++++||++|++|||+|+|++. +|++|++|||++.|+
T Consensus 85 ~~~Gi~~e~~yPY~~~-~~~C~~~~-~~~~~~i~~~~~~~~~~~~~l~~~l~~gPV~v~i~~~~~~f~~y~~Giy~~~~~ 162 (224)
T 3f75_A 85 DSGGICSEDAYPYLAR-DEECRAQS-CEKVVKILGFKDVPRRSEAAMKAALAKSPVSIAIEADQMPFQFYHEGVFDASCG 162 (224)
T ss_dssp HHTCBCBTTTSCCCSS-CCCCCGGG-SCCCBCCSEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHTEEEEEECCCCC
T ss_pred HhCCccccccCCCcCC-CCCCCcCC-CCceEEeccEEEeCCChHHHHHHHHcCCCEEEEEeccchhhhcCccceECCCCC
Confidence 8569999999999998 88998653 3455779999999878999999999999999999997 899999999997798
Q ss_pred CCCCeEEEEEEeeecC-CCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccceee
Q 043883 272 TFLNHGVTAVGYGTSE-EGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPV 332 (348)
Q Consensus 272 ~~~~Hav~iVGyg~~~-~g~~yWiikNSWG~~WGe~GY~~i~~~~~~~~~~Cgi~~~~~~p~ 332 (348)
..++|||+|||||+++ +|++|||||||||++||++|||||+|+... .|.|||+++++||+
T Consensus 163 ~~~~Hav~iVGyg~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~-~~~cgi~~~~~~p~ 223 (224)
T 3f75_A 163 TDLDHGVLLVGYGTDKESKKDFWIMKNSWGTGWGRDGYMYMAMHKGE-EGQCGLLLDASFPV 223 (224)
T ss_dssp CCCCEEEEEEEEEEETTTTEEEEEEECSBCTTSTBTTEEEEESCSCT-TCGGGTTSSCEEEE
T ss_pred CccCeEEEEEEEecccCCCCCEEEEECCcCcchhhCCEEEEEcCCCC-CCcCcccCceeeee
Confidence 8899999999999854 789999999999999999999999999632 36899999999997
No 32
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1
Probab=100.00 E-value=1.6e-58 Score=415.48 Aligned_cols=200 Identities=40% Similarity=0.756 Sum_probs=180.7
Q ss_pred CCCceecccCCCCCcccccccc-------HHHHHHHHHHHHcCCCcCCCHHHHHhhcCCCCCCCCCCCchhHHHHHHHHc
Q 043883 123 VPPSVNWIEKGAVTPVKYQGQC-------AVAAVEGINAIKINRLVSLSEQQLVDCATNDNNNGCYGGFMDDAFKYIIQN 195 (348)
Q Consensus 123 lP~~~Dwr~~g~v~pv~dQg~C-------a~~~~e~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~ 195 (348)
||++||||++|+|+||||||.| +++++|+++++++++.+.||||+|+||+.. +.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~vt~VkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~--~~gC~GG~~~~a~~~i~~~ 78 (214)
T 1m6d_A 1 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKM--DKACMGGLPSNAYSAIKNL 78 (214)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCSS--SCTTBCCCHHHHHHHHHHH
T ss_pred CCCcCcCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcCC--CCCCCCCCHHHHHHHHHHh
Confidence 7999999999999999999876 678899999999999999999999999863 7899999999999999887
Q ss_pred CCCCCCCcccccCCcCCCCCCcccCCccEEEeeeEecCCCCHHHHHHHHH-cCCeEEEEecCccccccCceEcC---CCC
Q 043883 196 KGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVA-NQPVSVAIDASALQFYSGGVFNG---YCE 271 (348)
Q Consensus 196 ~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~-~GPV~v~i~~~~f~~Y~~Giy~~---~c~ 271 (348)
+|+++|++|||.+. .+.|.... ....+++.++..++ .++++||++|+ +|||+|+|++..|++|++|||+. .|+
T Consensus 79 ~Gi~~e~~yPY~~~-~~~C~~~~-~~~~~~i~~~~~i~-~~~~~ik~~l~~~GPV~v~i~~~~f~~Y~~Giy~~~~~~c~ 155 (214)
T 1m6d_A 79 GGLETEDDYSYQGH-MQSCQFSA-EKAKVYIQDSVELS-QNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCS 155 (214)
T ss_dssp TCBCBTTTSCCCSS-CCCCCCCG-GGCCBCCSEEEECC-SCHHHHHHHHHHHCCEEEEECTHHHHHCCSSEECCCGGGSC
T ss_pred cCcccccCcCcCCC-CCcCCCCc-ccceEEecCEEEeC-hHHHHHHHHHHhCCCEEEEEEechhhhcCCceecCCCCcCC
Confidence 79999999999998 88998653 33456788998887 48999999998 79999999998899999999976 376
Q ss_pred C-CCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccceee
Q 043883 272 T-FLNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPV 332 (348)
Q Consensus 272 ~-~~~Hav~iVGyg~~~~g~~yWiikNSWG~~WGe~GY~~i~~~~~~~~~~Cgi~~~~~~p~ 332 (348)
. .++|||+|||||++ +|.+|||||||||++|||+|||||+|+. |.|||++.++||+
T Consensus 156 ~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~r~~----n~Cgi~~~~~~~~ 212 (214)
T 1m6d_A 156 PWLIDHAVLLVGYGQR-SDVPFWAIKNSWGTDWGEKGYYYLHRGS----GACGVNTMASSAV 212 (214)
T ss_dssp TTCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEESSS----CGGGTTTTCEEEE
T ss_pred CCcCCEEEEEEEEeec-CCcEEEEEEeCCCCCcccCcEEEEEcCC----CccccCceeEEEE
Confidence 5 58999999999984 8999999999999999999999999985 5799999999998
No 33
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A*
Probab=100.00 E-value=1.3e-58 Score=423.52 Aligned_cols=206 Identities=38% Similarity=0.721 Sum_probs=186.5
Q ss_pred CCCCCceecccCCCCCcccccccc-------HHHHHHHHHHHHcCCCcCCCHHHHHhhcCCCCCCCCCCCchhHHHHHHH
Q 043883 121 SQVPPSVNWIEKGAVTPVKYQGQC-------AVAAVEGINAIKINRLVSLSEQQLVDCATNDNNNGCYGGFMDDAFKYII 193 (348)
Q Consensus 121 ~~lP~~~Dwr~~g~v~pv~dQg~C-------a~~~~e~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~ 193 (348)
.+||++||||++|+|+||||||.| +++++|++++|++++.+.||+|+|+||+.. +.||+||++..|++|+.
T Consensus 18 ~~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~alE~~~~i~~~~~~~lSeq~lvdC~~~--~~gC~GG~~~~a~~y~~ 95 (243)
T 3bwk_A 18 KLDRIAYDWRLHGGVTPVKDQALCGSCWAFSSVGSVESQYAIRKKALFLFSEQELVDCSVK--NNGCYGGYITNAFDDMI 95 (243)
T ss_dssp CCCCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCSCCCBCHHHHHHHCTT--SCGGGCCCHHHHHHHHH
T ss_pred ccCCCceecCcCCCCCCCccCCCCchHHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcCC--CCCCCCCCHHHHHHHHH
Confidence 479999999999999999999876 678899999999999999999999999864 78999999999999999
Q ss_pred HcCCCCCCCcccccCCcCCC-CCCcccCCccEEEeeeEecCCCCHHHHHHHHHcCCeEEEEecC-ccccccCceEcCCCC
Q 043883 194 QNKGITNDAVYSYEGMSTGI-CDSIKAEDHAAQITNYEDVPPNDEESLLKAVANQPVSVAIDAS-ALQFYSGGVFNGYCE 271 (348)
Q Consensus 194 ~~~Gi~~e~~yPY~~~~~~~-C~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~GPV~v~i~~~-~f~~Y~~Giy~~~c~ 271 (348)
+++|+++|++|||.+. .+. |... .....+++++|..++..++++||++| |||+|+|+++ +|++|++|||+..|+
T Consensus 96 ~~~Gi~~e~~yPY~~~-~~~~C~~~-~~~~~~~i~~~~~v~~~~~~~ik~~l--GPV~v~i~~~~~f~~Y~~Giy~~~c~ 171 (243)
T 3bwk_A 96 DLGGLCSQDDYPYVSN-LPETCNLK-RCNERYTIKSYVSIPDDKFKEALRYL--GPISISIAASDDFAFYRGGFYDGECG 171 (243)
T ss_dssp HTTSBCBTTTSCCCTT-SCCCCCGG-GCSSCBCCCEEEECCTTCHHHHHHHT--CCEEEEECCCHHHHTCCSSSCCCCCC
T ss_pred HhCCcccccccCCcCC-CCCcCCCC-CCccceeeeeEEEeCCCCHHHHHHhh--CCEEEEEecChhHHhcCCceecCCCC
Confidence 8669999999999998 777 9865 23456889999999877999999999 9999999999 999999999988887
Q ss_pred CCCCeEEEEEEeeecC---------CCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccceee
Q 043883 272 TFLNHGVTAVGYGTSE---------EGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPV 332 (348)
Q Consensus 272 ~~~~Hav~iVGyg~~~---------~g~~yWiikNSWG~~WGe~GY~~i~~~~~~~~~~Cgi~~~~~~p~ 332 (348)
..++|||+|||||++. .|.+|||||||||++|||+|||||+|+.++..+.|||+++++||+
T Consensus 172 ~~~~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~ 241 (243)
T 3bwk_A 172 AAPNHAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGGYINLETDENGYKKTCSIGTEAYVPL 241 (243)
T ss_dssp SSCCEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCSTTTTSSEEEEE
T ss_pred CcCCeEEEEEEecCccccccccccCCCCCEEEEEeCCCCCcCCCcEEEEEcCCCCCCCcCCccceEEEEe
Confidence 6799999999999853 278999999999999999999999999765445699999999998
No 34
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ...
Probab=100.00 E-value=4.7e-58 Score=412.63 Aligned_cols=201 Identities=40% Similarity=0.735 Sum_probs=178.0
Q ss_pred CCCceecccCCCCCcccccccc-------HHHHHHHHHHHHcCCCcCCCHHHHHhhcCCCCCCCCCCCchhHHHHHHHHc
Q 043883 123 VPPSVNWIEKGAVTPVKYQGQC-------AVAAVEGINAIKINRLVSLSEQQLVDCATNDNNNGCYGGFMDDAFKYIIQN 195 (348)
Q Consensus 123 lP~~~Dwr~~g~v~pv~dQg~C-------a~~~~e~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~ 195 (348)
||++||||++|+|+||||||.| +++++|++++|++++.+.||||+|+||+. .+.||+||++..|++|++++
T Consensus 1 lP~~~Dwr~~g~vtpVkdQg~cGsCWAfa~~~ale~~~~i~~~~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~y~~~~ 78 (215)
T 3i06_A 1 APAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDK--TDSGCSGGLMNNAFEWIVQE 78 (215)
T ss_dssp CCSEEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHTTSCCCCCCHHHHHHHCS--SSCGGGCCCHHHHHHHHHHH
T ss_pred CCCcccCCcCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCccCHHHHhccCC--CCCCCCCCCHHHHHHHHHHh
Confidence 7999999999999999999876 67889999999999999999999999986 48899999999999999874
Q ss_pred --CCCCCCCcccccCCc--CCCCCCcccCCccEEEeeeEecCCCCHHHHHHHHH-cCCeEEEEecCccccccCceEcCCC
Q 043883 196 --KGITNDAVYSYEGMS--TGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVA-NQPVSVAIDASALQFYSGGVFNGYC 270 (348)
Q Consensus 196 --~Gi~~e~~yPY~~~~--~~~C~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~-~GPV~v~i~~~~f~~Y~~Giy~~~c 270 (348)
+|+++|++|||.... ...|... .....+++++|..++ .++++||++|+ +|||+|+|++.+|++|++|||+..+
T Consensus 79 ~~gGi~~e~~yPY~~~~~~~~~C~~~-~~~~~~~i~~~~~v~-~~~~~ik~~l~~~gPV~v~~~~~~f~~Y~~Giy~~~~ 156 (215)
T 3i06_A 79 NNGAVYTEDSYPYASGEGISPPCTTS-GHTVGATITGHVELP-QDEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTSCV 156 (215)
T ss_dssp STTEEEC-CCSCCCCTTSCCCCCCCS-SCCEEEEEEEEEECC-SCHHHHHHHHHHHCCEEEEECCTTGGGCCSSEECSCC
T ss_pred ccccccccCccCCcCCCCCCCccccC-CcccceEecceEEeC-ChHHHHHHHHHHCCCEEEEEEchHHhcCCCCcccCCC
Confidence 579999999999751 2368765 234567899999997 48999999998 7999999999899999999998633
Q ss_pred CCCCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccceee
Q 043883 271 ETFLNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPV 332 (348)
Q Consensus 271 ~~~~~Hav~iVGyg~~~~g~~yWiikNSWG~~WGe~GY~~i~~~~~~~~~~Cgi~~~~~~p~ 332 (348)
...++|||+|||||++ +|++|||||||||++|||+|||||+|+. |.|||++.++||+
T Consensus 157 ~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~rg~----n~cgi~~~~~~~~ 213 (215)
T 3i06_A 157 SEQLDHGVLLVGYNDS-AAVPYWIIKNSWTTQWGEEGYIRIAKGS----NQCLVKEEASSAV 213 (215)
T ss_dssp CSCCCEEEEEEEEESS-SSSCEEEEECSBCTTSTBTTEEEEESSS----CGGGTTSSEEEEE
T ss_pred CCccCcEEEEEEEecc-CCcEEEEEECCCCCCcccCceEEEecCC----CeecCCCceeEEe
Confidence 4568999999999974 8899999999999999999999999995 5799999999998
No 35
>3f5v_A DER P 1 allergen; allergy, asthma, DUST mites, glycoprotein, hydrola protease, secreted, thiol protease; HET: P6G; 1.36A {Dermatophagoides pteronyssinus} PDB: 2as8_A 3rvw_A* 3rvx_A 3rvv_A* 3d6s_A*
Probab=100.00 E-value=3e-57 Score=409.42 Aligned_cols=200 Identities=29% Similarity=0.584 Sum_probs=181.5
Q ss_pred CCCCCceecccCCCCCcccccccc-------HHHHHHHHHHHHcCCCcCCCHHHHHhhcCCCCCCCCCCCchhHHHHHHH
Q 043883 121 SQVPPSVNWIEKGAVTPVKYQGQC-------AVAAVEGINAIKINRLVSLSEQQLVDCATNDNNNGCYGGFMDDAFKYII 193 (348)
Q Consensus 121 ~~lP~~~Dwr~~g~v~pv~dQg~C-------a~~~~e~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~ 193 (348)
.+||++||||++|+|+||||||.| +++++|+++.+++++.+.||||+|+||+. +.||+||++..|++|++
T Consensus 8 ~~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~~~~~~~~~lS~q~l~dc~~---~~gC~GG~~~~a~~~~~ 84 (222)
T 3f5v_A 8 GNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRQQSLDLAEQELVDCAS---QHGCHGDTIPRGIEYIQ 84 (222)
T ss_dssp CCCCSCEEHHHHTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC---SSTTBCCCHHHHHHHHH
T ss_pred cCCCCCCCCccCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhCcC---CCCCCCCCHHHHHHHHH
Confidence 479999999999999999999876 67889999999999999999999999986 78999999999999999
Q ss_pred HcCCCCCCCcccccCCcCCCCCCcccCCccEEEeeeEecCCCCHHHHHHHHHc--CCeEEEEec--C-ccccccCceEcC
Q 043883 194 QNKGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVAN--QPVSVAIDA--S-ALQFYSGGVFNG 268 (348)
Q Consensus 194 ~~~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~--GPV~v~i~~--~-~f~~Y~~Giy~~ 268 (348)
++ |+++|++|||.+. .+.|.. .....+++.+|..++..++++||++|++ |||+|+|.+ . +|++|++|||..
T Consensus 85 ~~-Gi~~e~~yPY~~~-~~~C~~--~~~~~~~i~~~~~v~~~~~~~ik~~l~~~~gpV~v~~~~~~~~~f~~Y~~gi~~~ 160 (222)
T 3f5v_A 85 HN-GVVQESYYRYVAR-EQSCRR--PNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHYDGRTIIQ 160 (222)
T ss_dssp HH-CEEBGGGSCCCSS-CCCCCC--CSSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHHHTCCSSSCBC
T ss_pred Hc-CCCchhhCCCccc-CCCccC--CcCcceeeccEEEeCCCCHHHHHHHHHhcCCCEEEEEEeccchhhhccCCCceec
Confidence 97 9999999999998 888983 3456788999999987899999999984 899999998 3 899999998754
Q ss_pred -CC-CCCCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccceee
Q 043883 269 -YC-ETFLNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPV 332 (348)
Q Consensus 269 -~c-~~~~~Hav~iVGyg~~~~g~~yWiikNSWG~~WGe~GY~~i~~~~~~~~~~Cgi~~~~~~p~ 332 (348)
.| ...++|||+|||||++ +|++|||||||||++|||+|||||+|+. |.|||++.++||+
T Consensus 161 ~~~~~~~~~HaV~iVGyg~~-~g~~ywivkNSWG~~WGe~Gy~~i~r~~----n~cgi~~~~~~p~ 221 (222)
T 3f5v_A 161 RDNGYQPNYHAVNIVGYSNA-QGVDYWIVRNSWDTNWGDNGYGYFAANI----DLMMIEEYPYVVI 221 (222)
T ss_dssp CCCSSSCEEEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTTSCEEEE
T ss_pred CCCCCCccCcEEEEEEEecc-CCCEEEEEEcCCCCCcccCCEEEEEcCC----CeecCCCceeEEe
Confidence 34 4568999999999985 8999999999999999999999999994 6799999999997
No 36
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ...
Probab=100.00 E-value=3.8e-54 Score=399.10 Aligned_cols=206 Identities=26% Similarity=0.545 Sum_probs=171.0
Q ss_pred CCCCCceecccC----CCCCcccccccc-------HHHHHHHHHHHHcC--CCcCCCHHHHHhhcCCCCCCCCCCCchhH
Q 043883 121 SQVPPSVNWIEK----GAVTPVKYQGQC-------AVAAVEGINAIKIN--RLVSLSEQQLVDCATNDNNNGCYGGFMDD 187 (348)
Q Consensus 121 ~~lP~~~Dwr~~----g~v~pv~dQg~C-------a~~~~e~~~~i~~~--~~~~lS~q~l~dC~~~~~~~gC~GG~~~~ 187 (348)
.+||++||||++ +.|+||||||.| +++++|++++|+++ ..+.||+|+|+||+..+.+.||+||++..
T Consensus 5 ~~lP~~~D~R~~w~~~~~vt~VkdQg~CGSCWAfa~~~ale~~~~i~~~~~~~~~LS~q~lvdC~~~~~~~gC~GG~~~~ 84 (266)
T 3cbj_A 5 LKLPASFDAREQWPQCPTIKEIRDQGSCGSAWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAE 84 (266)
T ss_dssp CCCCSCEEHHHHSTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHCGGGGBCTTBCBCHHH
T ss_pred CCCCccCcchhccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHhCCCCccccCHHHHHhhccccCCCCCCCCCHHH
Confidence 479999999987 789999999877 67889999999876 47899999999998632468999999999
Q ss_pred HHHHHHHcCCCCC-------CCcccccC---------CcCCCCCCc--------cc-C-------CccEEEeeeEecCCC
Q 043883 188 AFKYIIQNKGITN-------DAVYSYEG---------MSTGICDSI--------KA-E-------DHAAQITNYEDVPPN 235 (348)
Q Consensus 188 a~~~~~~~~Gi~~-------e~~yPY~~---------~~~~~C~~~--------~~-~-------~~~~~i~~~~~v~~~ 235 (348)
||+|+.++ |+++ |++|||.. . .+.|... .. . ........+..++ .
T Consensus 85 a~~y~~~~-Gi~~~~~Y~~~e~~~PY~~~~~~~~~~~~-~~~C~~~~~~p~c~~~c~~~~~~~~~~~~~~~~~~~~v~-~ 161 (266)
T 3cbj_A 85 AWNFWTRK-GLVSGGLYESHVGCRPYSIPPCEAHVNGA-RPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVS-N 161 (266)
T ss_dssp HHHHHHHT-CBCBCCSTTCCCSSSCCCSCCCSCCCSCS-SCCCCSCCCCCCCCCSCCTTCCSCTGGGCBCBSCCEECC-S
T ss_pred HHHHHHHh-CcCcCccccccccccCcccccccccccCC-CCCCccccCCCccccccCCCCcceeeeeeeeeeeeEEeC-C
Confidence 99999986 9999 99999983 3 4556321 00 0 0011122334565 5
Q ss_pred CHHHHHHHHH-cCCeEEEEecC-ccccccCceEcCCCCCC-CCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEE
Q 043883 236 DEESLLKAVA-NQPVSVAIDAS-ALQFYSGGVFNGYCETF-LNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQ 312 (348)
Q Consensus 236 ~~~~lk~~l~-~GPV~v~i~~~-~f~~Y~~Giy~~~c~~~-~~Hav~iVGyg~~~~g~~yWiikNSWG~~WGe~GY~~i~ 312 (348)
++++||++|+ +|||+|+|+++ +|++|++|||..+|+.. ++|||+|||||++ +|.+|||||||||++|||+|||||+
T Consensus 162 ~~~~i~~~i~~~GPV~v~i~~~~~f~~Y~~Gvy~~~~~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~ 240 (266)
T 3cbj_A 162 SEKDIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVTGEMMGGHAIRILGWGVE-NGTPYWLVANSWNTDWGDNGFFKIL 240 (266)
T ss_dssp CHHHHHHHHHHHCCEEEEEEEEGGGGGCCSSEECCCSSCEEEEEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEE
T ss_pred CHHHHHHHHHhcCCEEEEEEeccchhhcCCeEEecCCCCccCCeEEEEEEeccc-CCceEEEEEcCCCCccCCCCEEEEE
Confidence 8999999998 79999999998 99999999999877654 5999999999984 8999999999999999999999999
Q ss_pred ecCCCCCCccccccccceeeec
Q 043883 313 RDIDQPQGQCGIAMFASFPVSK 334 (348)
Q Consensus 313 ~~~~~~~~~Cgi~~~~~~p~~~ 334 (348)
|+. |.|||++.+++++++
T Consensus 241 rg~----n~cgI~~~~~~~~p~ 258 (266)
T 3cbj_A 241 RGQ----DHCGIESEVVAGIPR 258 (266)
T ss_dssp CSS----CGGGTTTSCEECCBC
T ss_pred cCC----CcccccCceEEEEee
Confidence 985 579999999999844
No 37
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A
Probab=100.00 E-value=8.9e-54 Score=398.39 Aligned_cols=205 Identities=27% Similarity=0.576 Sum_probs=176.6
Q ss_pred CCCCCceecccC---CCCCcccccc---cc-------HHHHHHHHHHHHcC-C--CcCCCHHHHHhhcCCCCCCCCCCCc
Q 043883 121 SQVPPSVNWIEK---GAVTPVKYQG---QC-------AVAAVEGINAIKIN-R--LVSLSEQQLVDCATNDNNNGCYGGF 184 (348)
Q Consensus 121 ~~lP~~~Dwr~~---g~v~pv~dQg---~C-------a~~~~e~~~~i~~~-~--~~~lS~q~l~dC~~~~~~~gC~GG~ 184 (348)
.+||++||||++ ++|+|||||| .| +++++|++++|+++ + .+.||+|+|+||+. ..||+||+
T Consensus 34 ~~lP~~~DwR~~~~~~~vtpVkdQg~~~~CGSCWAfa~~~alE~~~~i~~~g~~~~~~LS~Q~lvdC~~---~~gC~GG~ 110 (277)
T 1deu_A 34 ADLPKSWDWRNVDGVNYASITRNQHIPQYCGSCWAHASTSAMADRINIKRKGAWPSTLLSVQNVIDCGN---AGSCEGGN 110 (277)
T ss_dssp GGSCSCEETTSBTTBCCCCCCCBTTCSSCCBCHHHHHHHHHHHHHHHHHTTTCSSCCCBCHHHHHHHSS---SEETBEEC
T ss_pred ccCCCceecccCCCCCcCCccccCCCCCCCcchHHHHHHHHHHHHHHHHhCCCCCCcccCHHHHHhCcC---CCCCCCCC
Confidence 579999999998 6799999998 77 67889999999875 4 47999999999986 47999999
Q ss_pred hhHHHHHHHHcCCCCCCCcccccCCcCCCCCC-cc-------------cCCccEEEeeeEecCCCCHHHHHHHHH-cCCe
Q 043883 185 MDDAFKYIIQNKGITNDAVYSYEGMSTGICDS-IK-------------AEDHAAQITNYEDVPPNDEESLLKAVA-NQPV 249 (348)
Q Consensus 185 ~~~a~~~~~~~~Gi~~e~~yPY~~~~~~~C~~-~~-------------~~~~~~~i~~~~~v~~~~~~~lk~~l~-~GPV 249 (348)
+..||+|+.++ ||++|++|||.+. .+.|.. .. .....+++.+|..++ ++++||++|+ +|||
T Consensus 111 ~~~a~~yi~~~-Gi~~e~~yPY~~~-~~~C~~~~~~~~~~~~~~c~~~~~~~~~~i~~y~~v~--~~~~i~~~i~~~GPV 186 (277)
T 1deu_A 111 DLSVWDYAHQH-GIPDETCNNYQAK-DQECDKFNQCGTCNEFKECHAIRNYTLWRVGDYGSLS--GREKMMAEIYANGPI 186 (277)
T ss_dssp HHHHHHHHHHT-CBCBGGGSCCCSS-CCCCCHHHHSEEEEETTEEEECSSCCCBCEEEEEEEC--SHHHHHHHHHHHCCE
T ss_pred HHHHHHHHHHc-CCCcCccCCCcCC-CCCccccccccccccCcccccccCcceEEeceeEecC--CHHHHHHHHHHcCCE
Confidence 99999999986 9999999999988 778873 10 112346788888886 6889999998 8999
Q ss_pred EEEEecC-ccccccCceEcCC-CCCCCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCC---C-CCCccc
Q 043883 250 SVAIDAS-ALQFYSGGVFNGY-CETFLNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDID---Q-PQGQCG 323 (348)
Q Consensus 250 ~v~i~~~-~f~~Y~~Giy~~~-c~~~~~Hav~iVGyg~~~~g~~yWiikNSWG~~WGe~GY~~i~~~~~---~-~~~~Cg 323 (348)
+|+|+++ +|++|++|||+.+ |...++|||+|||||++ +|++|||||||||++|||+|||||+|+.+ . ....||
T Consensus 187 ~v~i~~~~~f~~Y~~GIy~~~~~~~~~~HaV~iVGyg~~-~g~~YWivkNSWG~~WGe~GY~~i~rg~n~~g~g~~~~cg 265 (277)
T 1deu_A 187 SCGIMATERLANYTGGIYAEYQDTTYINHVVSVAGWGIS-DGTEYWIVRNSWGEPWGERGWLRIVTSTYKDGKGARYNLA 265 (277)
T ss_dssp EEEECCCHHHHTCCSSEECBCCSCCCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECTTHHHHTGGGTBTT
T ss_pred EEEEecccccccCcCcEECCCCCCCcCCeEEEEEEeccc-CCccEEEEEeCCCCccCCCcEEEEEcCCCcccccccccce
Confidence 9999999 9999999999886 44568999999999985 89999999999999999999999999974 0 001699
Q ss_pred cccccceeee
Q 043883 324 IAMFASFPVS 333 (348)
Q Consensus 324 i~~~~~~p~~ 333 (348)
|++++.|+++
T Consensus 266 Ie~~~~~~~p 275 (277)
T 1deu_A 266 IEEHCTFGDP 275 (277)
T ss_dssp TTSCEEEEEE
T ss_pred eccccEeecc
Confidence 9999999984
No 38
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A*
Probab=100.00 E-value=2.5e-53 Score=391.18 Aligned_cols=202 Identities=28% Similarity=0.561 Sum_probs=167.7
Q ss_pred CCCCceecccC----CCCCcccccccc-------HHHHHHHHHHHHcC--CCcCCCHHHHHhhcCCCCCCCCCCCchhHH
Q 043883 122 QVPPSVNWIEK----GAVTPVKYQGQC-------AVAAVEGINAIKIN--RLVSLSEQQLVDCATNDNNNGCYGGFMDDA 188 (348)
Q Consensus 122 ~lP~~~Dwr~~----g~v~pv~dQg~C-------a~~~~e~~~~i~~~--~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a 188 (348)
+||++||||++ +.|+||||||.| +++++|++++|+++ ..+.||||+|+||+.. .+.||+||++..|
T Consensus 2 ~lP~s~D~R~~~~~~~~vtpVkdQg~CGSCWAFaa~~ale~~~~i~~~~~~~~~LSeQ~lvdC~~~-~~~GC~GG~~~~a 80 (254)
T 3qsd_A 2 EIPSSFDSRKKWPRCKSIATIRDQSRCGSCWAFGAVEAMSDRSCIQSGGKQNVELSAVDLLSCCES-CGLGCEGGILGPA 80 (254)
T ss_dssp CCCSCEEHHHHCTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTCCCCCBCHHHHHHHCTT-SBCTTBCBCHHHH
T ss_pred CCCCcCccccccCCCCccCCCCCcccCccHHHHHHHHHHHHHHHHHhCCCccccCCHHHHHhhhcC-CCCCCCCCCHHHH
Confidence 68999999998 689999999876 67889999999986 6889999999999864 4689999999999
Q ss_pred HHHHHHcCCCCCCCcc-------ccc---------CCcCCCCCCcc---------c----CCcc----EEEeeeEecCCC
Q 043883 189 FKYIIQNKGITNDAVY-------SYE---------GMSTGICDSIK---------A----EDHA----AQITNYEDVPPN 235 (348)
Q Consensus 189 ~~~~~~~~Gi~~e~~y-------PY~---------~~~~~~C~~~~---------~----~~~~----~~i~~~~~v~~~ 235 (348)
|+|++++ ||++|+.| ||. +. .+.|.... . .... ......+.++ .
T Consensus 81 ~~yi~~~-Gi~~e~~y~~~~~c~PY~~~~c~~~~~~~-~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~-~ 157 (254)
T 3qsd_A 81 WDYWVKE-GIVTGSSKENHAGCEPYPFPKCEHHTKGK-YPPCGSKIYKTPRCKQTCQKKYKTPYTQDKHRGKSSYNVK-N 157 (254)
T ss_dssp HHHHHHT-CBCBCCCTTTCCSSSCCSSCCCBCSSCSS-SCBCCSCCCCCCCCCCCCCTTCCSCGGGGCBCCSEEEECC-S
T ss_pred HHHHHHc-CCCcccccccCcCcCCcccccccccccCc-CCCCcccccCCccccccccCCccceeeeeeeeeeeeEecC-C
Confidence 9999987 99999888 997 22 34453210 0 0000 1111223454 4
Q ss_pred CHHHHHHHHH-cCCeEEEEecC-ccccccCceEcCCCCC-CCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEE
Q 043883 236 DEESLLKAVA-NQPVSVAIDAS-ALQFYSGGVFNGYCET-FLNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQ 312 (348)
Q Consensus 236 ~~~~lk~~l~-~GPV~v~i~~~-~f~~Y~~Giy~~~c~~-~~~Hav~iVGyg~~~~g~~yWiikNSWG~~WGe~GY~~i~ 312 (348)
++++||++|+ +|||+|+|++. +|++|++|||..+|.. .++|||+|||||++ +|++|||||||||++|||+|||||+
T Consensus 158 ~~~~i~~~l~~~gPv~~~~~~~~~f~~y~~Gi~~~~~~~~~~~Hav~iVGyg~~-~g~~ywivkNSWG~~WG~~Gy~~i~ 236 (254)
T 3qsd_A 158 DEKAIQKEIMKYGPVEAGFTVYEDFLNYKSGIYKHITGETLGGHAIRIIGWGVE-NKAPYWLIANSWNEDWGENGYFRIV 236 (254)
T ss_dssp CHHHHHHHHHHHCCEEEEEEEEGGGGGCCSSEECCCSSCEEEEEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEE
T ss_pred cHHHHHHHHHHcCCEEEEEEeccccccccCCeeccCCCCCCCCeEEEEEEEeec-CCeeEEEEEeCCCCCcccCCeEEEE
Confidence 8999999998 79999999998 9999999999987654 45999999999984 8999999999999999999999999
Q ss_pred ecCCCCCCccccccccceee
Q 043883 313 RDIDQPQGQCGIAMFASFPV 332 (348)
Q Consensus 313 ~~~~~~~~~Cgi~~~~~~p~ 332 (348)
|+. |.|||++.++..+
T Consensus 237 rg~----n~CgI~~~~~~~~ 252 (254)
T 3qsd_A 237 RGR----DECSIESEVTAGR 252 (254)
T ss_dssp CSS----CGGGTTSSEEEEE
T ss_pred cCC----CeecCCCceEeec
Confidence 995 5799999998776
No 39
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X
Probab=100.00 E-value=7.5e-49 Score=363.49 Aligned_cols=205 Identities=22% Similarity=0.450 Sum_probs=158.9
Q ss_pred CceecccC-CCCC--cccccccc-------HHHHHHHHHHHHcCCCcCCCHHHHHhhcCCCCCCCCCCCchh-HHHHHHH
Q 043883 125 PSVNWIEK-GAVT--PVKYQGQC-------AVAAVEGINAIKINRLVSLSEQQLVDCATNDNNNGCYGGFMD-DAFKYII 193 (348)
Q Consensus 125 ~~~Dwr~~-g~v~--pv~dQg~C-------a~~~~e~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~-~a~~~~~ 193 (348)
--.|||++ |+++ ||||||.| +++++|++++|++++++.||||+|+||+...++.||+||... .++.|+.
T Consensus 9 ~~~dWR~~~~~~~it~VkdQg~CGSCWAFaa~~alE~~~~i~~~~~~~LS~Q~lvdC~~~~~~~GC~GG~~~~~~~~~i~ 88 (265)
T 2wbf_X 9 YCNRLKDENNCISNLQVEDQGNCDTSWIFASKYHLETIRCMKGYEPTKISALYVANCYKGEHKDRCDEGSSPMEFLQIIE 88 (265)
T ss_dssp CBCGGGCTTSTGGGSCCCBCTTSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHCCSSSCCCTTTCCCCHHHHHHHHH
T ss_pred HHHhhccCCCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHhhcccCCCCCCCCCCHHHHHHHHH
Confidence 35799999 6887 99999977 678899999999999999999999999975468999999654 5567887
Q ss_pred HcCCCCCCCcccccCC-cCCCCCCccc----------------CCccEEEeeeEecCC----CC----HHHHHHHHH-cC
Q 043883 194 QNKGITNDAVYSYEGM-STGICDSIKA----------------EDHAAQITNYEDVPP----ND----EESLLKAVA-NQ 247 (348)
Q Consensus 194 ~~~Gi~~e~~yPY~~~-~~~~C~~~~~----------------~~~~~~i~~~~~v~~----~~----~~~lk~~l~-~G 247 (348)
+++||++|++|||.+. ..+.|+.... .....++.+|..++. .+ +++||++|+ +|
T Consensus 89 ~~Ggi~~e~~yPY~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ik~~i~~~G 168 (265)
T 2wbf_X 89 DYGFLPAESNYPYNYVKVGEQCPKVEDHWMNLWDNGKILHNKNEPNSLDGKGYTAYESERFHDNMDAFVKIIKTEVMNKG 168 (265)
T ss_dssp HHCCCCBTTTSCCCGGGTTSCCCCCCTTCCCTTTTCEECCCCCSSSTTCCSSEEEEEGGGGTTCHHHHHHHHHHHHHHHS
T ss_pred HcCCCCCccccCCcCCCCCCCCCCccccccccccccccccccCCCceeecCCceEeeccccccchhhHHHHHHHHHHhcC
Confidence 7756999999999864 1467865321 112346777877754 24 478999998 79
Q ss_pred CeEEEEecCcccccc-CceE-cCCCCC-CCCeEEEEEEeeec--CCC--ceEEEEEcCCCCCCCCCcEEEEEecCCCCCC
Q 043883 248 PVSVAIDASALQFYS-GGVF-NGYCET-FLNHGVTAVGYGTS--EEG--IKYWLIKNSWGQDWGEDGYFRLQRDIDQPQG 320 (348)
Q Consensus 248 PV~v~i~~~~f~~Y~-~Giy-~~~c~~-~~~Hav~iVGyg~~--~~g--~~yWiikNSWG~~WGe~GY~~i~~~~~~~~~ 320 (348)
||+|+|++.+|+.|+ +|++ ...|+. .++|||+|||||++ ++| ++|||||||||++|||+|||||+|+.. |
T Consensus 169 PV~v~i~~~~f~~y~~~g~~~~~~c~~~~~~HaV~iVGyG~~~~~~g~~~~YWivkNSWG~~WGe~GY~ri~~~g~---n 245 (265)
T 2wbf_X 169 SVIAYIKAENVMGYEFSGKKVKNLCGDDTADHAVNIVGYGNYVNSEGEKKSYWIVRNSWGPYWGDEGYFKVDMYGP---T 245 (265)
T ss_dssp CEEEEECGGGGCSGGGGSSSEECCCCCSCCCEEEEEEEEEEEECTTSCEEEEEEEECSBCTTSTBTTEEEEESSCC---T
T ss_pred CEEEEEEcccccccccCCcEEcCCCCCCcCCEEEEEEEEeCCcccCCCcCCEEEEEcCCCCccCCCCEEEEEecCC---C
Confidence 999999988777774 4432 345875 68999999999984 355 689999999999999999999998542 5
Q ss_pred ccccccccceee
Q 043883 321 QCGIAMFASFPV 332 (348)
Q Consensus 321 ~Cgi~~~~~~p~ 332 (348)
.|||+..+.+++
T Consensus 246 ~Cgi~~~~~~~~ 257 (265)
T 2wbf_X 246 HCHFNFIHSVVI 257 (265)
T ss_dssp TCSSCSCCEEEE
T ss_pred ccCcceeEEEEe
Confidence 799665444433
No 40
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa}
Probab=100.00 E-value=7.7e-46 Score=347.53 Aligned_cols=228 Identities=19% Similarity=0.234 Sum_probs=168.6
Q ss_pred cEEEEcccCCCCCHHHHHHhhcCcCCCCCcccccCCCCccccCCCCCCCceecccCCCCCcccccccc-------HHHHH
Q 043883 77 SYTLRLNKFADLTPQEFIASQTGFKMSDHSSSLKANGTPFLYKSSQVPPSVNWIEKGAVTPVKYQGQC-------AVAAV 149 (348)
Q Consensus 77 s~~~g~N~FsD~t~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pv~dQg~C-------a~~~~ 149 (348)
...-..|++.++..|.|+.. +|..++.+..+......+. ....+||++||||+++ ||||||.| +++++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~-lG~~p~~~d~rd~~~~~~~-~~~~~lP~s~DwR~~~---pVkdQG~CGSCWAFAa~~al 87 (291)
T 3ois_A 13 GLVPRGSHMQTVLKRRKKSG-YGYIPDIADIRDFSYTPEK-SVIAALPPKVDLTPPF---QVYDQGRIGSCTANALAAAI 87 (291)
T ss_dssp ----------CCCCCCCCTT-CCEECCCCCTTCCBCCCCH-HHHHTCCSEEECCCSS---CCCBCTTSSCHHHHHHHHHH
T ss_pred CcccchhhHhHhhhcccccc-CCCCCCCCcccccccCCCc-cccccCCcceecccCC---CcccCCCCccHHHHHHHHHH
Confidence 34456789999999988765 5665554422211110000 0014799999999984 99999977 67888
Q ss_pred HHHHHHHcCCCcCCCHHHHH--hhcCC-CCC-CCCCCCchhHHHHHHHHcCCCCCCCcccccCCc--CCCCCCcc-----
Q 043883 150 EGINAIKINRLVSLSEQQLV--DCATN-DNN-NGCYGGFMDDAFKYIIQNKGITNDAVYSYEGMS--TGICDSIK----- 218 (348)
Q Consensus 150 e~~~~i~~~~~~~lS~q~l~--dC~~~-~~~-~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~--~~~C~~~~----- 218 (348)
|+++ +++++.+.||+|+|+ +|... .++ .+|.||++..||+|++++ ||++|++|||.+.. .+.|....
T Consensus 88 E~~~-~~~g~~~~lS~q~l~~~~c~~~~~~~~~~c~GG~~~~A~~yi~~~-Gi~~e~~yPY~~~~~~~~~C~~~~~~~~~ 165 (291)
T 3ois_A 88 QFER-IHDKQSPEFIPSRLFIYYNERKIEGHVNYDSGAMIRDGIKVLHKL-GVCPEKEWPYGDTPADPRTEEFPPGAPAS 165 (291)
T ss_dssp HHHH-HHTTCSSCCCBCHHHHHHHHHHHSSCTTSCCCEEHHHHHHHHHHT-CCCBGGGSCCCCCCCCTTTCSCCTTCGGG
T ss_pred HHHH-HHhCCCCCcCcCHHHHHhhhhhhhcCCCCCCCcCHHHHHHHHHHh-CCCCHhhCCCCCCcccccccccccccccc
Confidence 9877 467788899999998 68642 233 468899999999999987 99999999998761 13564410
Q ss_pred --------cCCccEEEeeeEecCCCCHHHHHHHHH-cCCeEEEEecC-ccccccC--ceEcCC-CCC-C-CCeEEEEEEe
Q 043883 219 --------AEDHAAQITNYEDVPPNDEESLLKAVA-NQPVSVAIDAS-ALQFYSG--GVFNGY-CET-F-LNHGVTAVGY 283 (348)
Q Consensus 219 --------~~~~~~~i~~~~~v~~~~~~~lk~~l~-~GPV~v~i~~~-~f~~Y~~--Giy~~~-c~~-~-~~Hav~iVGy 283 (348)
.....+++++|..|+. ++++||++|+ +|||+|+|+++ +|+.|++ |||..+ |.. . ++|||+||||
T Consensus 166 ~~p~~~C~~~~~~~~i~~y~~v~~-~e~~i~~al~~~gPV~v~~~~~~~f~~y~~~~Gi~~~~~~~~~~~~~Hav~iVGy 244 (291)
T 3ois_A 166 KKPSDQCYKDAQNYKITEYSRVAQ-DIDHLKACLAVGSPFVFGFSVYNSWVGNNSLPVRIPLPTKNDTLEGGHAVLCVGY 244 (291)
T ss_dssp SCCCHHHHHHHGGGCCCEEEECCS-CHHHHHHHHHTTCCEEEEEEEEHHHHGGGCCCSBCCCCCTTSCEEEEEEEEEEEE
T ss_pred CCCCHHHHhhcccceeccEEEcCc-CHHHHHHHHHcCCCEEEEEEeccchhhcCCCCeEEeCCCCCCCCcCCeEEEEEEE
Confidence 0124578999999985 8999999999 68999999999 9999998 999875 433 2 5999999999
Q ss_pred eecCCCceEEEEEcCCCCCCCCCcEEEEEecC
Q 043883 284 GTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDI 315 (348)
Q Consensus 284 g~~~~g~~yWiikNSWG~~WGe~GY~~i~~~~ 315 (348)
| ++++|||||||||++||++|||||+|+.
T Consensus 245 ~---~~~~ywivkNSWG~~WG~~Gy~~i~~~~ 273 (291)
T 3ois_A 245 D---DEIRHFRIRNSWGNNVGEDGYFWMPYEY 273 (291)
T ss_dssp E---TTTTEEEEECSBCTTSTBTTEEEEEHHH
T ss_pred e---CCCCEEEEEeCCCCCCCCCcEEEEEHHH
Confidence 8 4678999999999999999999999984
No 41
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A
Probab=100.00 E-value=1.1e-35 Score=290.12 Aligned_cols=204 Identities=16% Similarity=0.220 Sum_probs=152.7
Q ss_pred CCCCceecccCCCCCcccccccc-------HHHHHHHHHHHH-cCCCcCCCH----------------HHHHhhcCC---
Q 043883 122 QVPPSVNWIEKGAVTPVKYQGQC-------AVAAVEGINAIK-INRLVSLSE----------------QQLVDCATN--- 174 (348)
Q Consensus 122 ~lP~~~Dwr~~g~v~pv~dQg~C-------a~~~~e~~~~i~-~~~~~~lS~----------------q~l~dC~~~--- 174 (348)
..|..|+++....++||+|||+| +++++|+.++++ +++.+.||+ |+|+||+..
T Consensus 47 ~~~~~F~~~~~~~~tpVknQg~cGsCWaFs~~~~le~~~~~k~~~~~~~lSe~yl~fwDKlEkan~flq~lidc~~~~~~ 126 (453)
T 2cb5_A 47 RAQHVFQHAVPQEGKPITNQKSSGRSWIFSCLNVMRLPFMKKLNIEEFEFSQSYLFFWDKVERCYFFLSAFVDTAQRKEP 126 (453)
T ss_dssp HCCCCCSEECSCCCSSCCBCCBSSCHHHHHHHHHHHHHHHHHTTCSCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCCceeeeeccCCCCcccCCCccchHhhhhHHHHHHHHHHHhcCCeEeeChHHHHHHHHHHHhhHHHHHHHHHHhccCC
Confidence 45778888888889999999876 788899999888 578999999 999999853
Q ss_pred ---------CCCCCCCCCchhHHHHHHHHcCCCCCCCcccccCCc--------------------------CC------C
Q 043883 175 ---------DNNNGCYGGFMDDAFKYIIQNKGITNDAVYSYEGMS--------------------------TG------I 213 (348)
Q Consensus 175 ---------~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~--------------------------~~------~ 213 (348)
.++.||+||....|+.++.+. |++++++|||+... .+ .
T Consensus 127 ~d~R~v~~l~~~~gcdGG~~~~a~~~i~ky-Gl~p~~~yP~~~~s~ns~~mn~~L~~kLr~~a~~LR~~~~~g~~~~~l~ 205 (453)
T 2cb5_A 127 EDGRLVQFLLMNPANDGGQWDMLVNIVEKY-GVIPKKCFPESYTTEATRRMNDILNHKMREFCIRLRNLVHSGATKGEIS 205 (453)
T ss_dssp TTSHHHHHHHHCTTCSCBCHHHHHHHHHHH-CCCBGGGSCCCTGGGBCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred cchhhHHHhcCCCCCCCCChHHHHHHHHHc-CccchhhccccccccchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHH
Confidence 247899999999999999875 99999999998641 01 1
Q ss_pred ----------------C----------CCcccC-----------------CccE--EEeeeEec----------------
Q 043883 214 ----------------C----------DSIKAE-----------------DHAA--QITNYEDV---------------- 232 (348)
Q Consensus 214 ----------------C----------~~~~~~-----------------~~~~--~i~~~~~v---------------- 232 (348)
| .....+ .... .+.+|..|
T Consensus 206 ~~k~~~l~~iy~il~~clG~pP~~F~~~~~dkd~~~~~~~~~TP~~F~~~~~~~~~~~~~yv~l~n~p~~~~py~~~y~v 285 (453)
T 2cb5_A 206 ATQDVMMEEIFRVVCICLGNPPETFTWEYRDKDKNYEKIGPITPLEFYREHVKPLFNMEDKICLVNDPRPQHKHNKLYTV 285 (453)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCSSEEEEEECTTSCEEEEEEECHHHHHHHHTTTTSCGGGEEEEECCCCTTSCSSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCCceeeEEEEccCCcccccCCCCHHHHHHHhcCCcCCCCCeEEEecCCCCcCcccceeEE
Confidence 4 110000 0001 33444433
Q ss_pred -----------------CCCCH-HHHHHHHH-cCCeEEEEecCccccccCceEcCCC-----------------------
Q 043883 233 -----------------PPNDE-ESLLKAVA-NQPVSVAIDASALQFYSGGVFNGYC----------------------- 270 (348)
Q Consensus 233 -----------------~~~~~-~~lk~~l~-~GPV~v~i~~~~f~~Y~~Giy~~~c----------------------- 270 (348)
+..+. +.++.+|+ .|||+++++++.+.++++|||+.+|
T Consensus 286 ~~~~Nv~~g~~~~y~Nvp~~~l~~~~~~al~~g~PV~~~~Dv~~~~~~k~GI~~~~~~~~~~~fg~~~~~m~KaeRl~~~ 365 (453)
T 2cb5_A 286 EYLSNMVGGRKTLYNNQPIDFLKKMVAASIKDGEAVWFGCDVGKHFNSKLGLSDMNLYDHELVFGVSLKNMNKAERLTFG 365 (453)
T ss_dssp TTCCSSTTCCCCCEEECCHHHHHHHHHHHHHTTCCEEEEECTTTTEETTTTEECTTSBCHHHHHSCCSCSSCHHHHHHTT
T ss_pred eecCcccccccccccccCHHHHHHHHHHHHHcCCCEEEEEEeChhhccCCcEEcCccccchhhcCccccccCHHHHhhcc
Confidence 21111 33446777 5899999999965667999998753
Q ss_pred CCCCCeEEEEEEee--ecCCCc-eEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccceeeec
Q 043883 271 ETFLNHGVTAVGYG--TSEEGI-KYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPVSK 334 (348)
Q Consensus 271 ~~~~~Hav~iVGyg--~~~~g~-~yWiikNSWG~~WGe~GY~~i~~~~~~~~~~Cgi~~~~~~p~~~ 334 (348)
.+..+|||+||||| .+++|+ +|||||||||++||++|||+|+|+ .+...++.++++
T Consensus 366 ~s~~~HAmlivGyg~~~d~~G~~~yWiVkNSWG~~wG~~GY~~ms~~--------wf~ey~~~vvV~ 424 (453)
T 2cb5_A 366 ESLMTHAMTFTAVSEKDDQDGAFTKWRVENSWGEDHGHKGYLCMTDE--------WFSEYVYEVVVD 424 (453)
T ss_dssp SCCCCEEEEEEEEEECTTSCSCEEEEEEECSBCTTSTBTTEEEEEHH--------HHHHHEEEEEEE
T ss_pred CCCCCeEEEEEEeccccccCCCccEEEEEcCcCCCcCcCceEEechh--------hHhhceEEEEec
Confidence 23579999999999 755787 999999999999999999999985 366666666543
No 42
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A
Probab=100.00 E-value=1.6e-34 Score=282.06 Aligned_cols=204 Identities=19% Similarity=0.203 Sum_probs=140.6
Q ss_pred CCCCceecccCCCCCcccccccc-------HHHHHHHHHHHH-cCCCcCCCH----------------HHHHhhcCCC--
Q 043883 122 QVPPSVNWIEKGAVTPVKYQGQC-------AVAAVEGINAIK-INRLVSLSE----------------QQLVDCATND-- 175 (348)
Q Consensus 122 ~lP~~~Dwr~~g~v~pv~dQg~C-------a~~~~e~~~~i~-~~~~~~lS~----------------q~l~dC~~~~-- 175 (348)
..|..|+|+....+|||||||+| +++++|+.++++ +++.+.||+ |+|+||+...
T Consensus 52 ~~~~~F~~~~~~~vtpVknQg~cGsCWaFs~~~~lE~~~~~~~~~~~~~LSe~yl~~~dklEkan~flq~lvdc~~~~~~ 131 (457)
T 2e01_A 52 QDNRVFNTVVSTDSTPVTNQKSSGRCWLFAATNQLRLNVLSELNLKEFELSQAYLFFYDKLEKANYFLDQIVSSADQDID 131 (457)
T ss_dssp HCCCCCSEECC------------CCHHHHHHHHHHHHHHHHHTTCSSCCBCHHHHHHHHHHHHHHHHHHHHHHTTTSCTT
T ss_pred CCCCceEEEecCCccCcccCCCCccchhHHhHHHHHHHHHHHhCCCceeeCChhhhhhhHHHHHHHHHHHHHHhcCCccc
Confidence 35677888888889999999876 788899999988 788999999 7889997521
Q ss_pred --------CCCCCCCCchhHHHHHHHHcCCCCCCCcccc-cCC--------------------------------cC---
Q 043883 176 --------NNNGCYGGFMDDAFKYIIQNKGITNDAVYSY-EGM--------------------------------ST--- 211 (348)
Q Consensus 176 --------~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY-~~~--------------------------------~~--- 211 (348)
.+.||+||....++.++.+. ||+++++||| +.. ..
T Consensus 132 ~r~v~~l~~~~gcdGG~~~~a~~~i~ky-Givpe~~yP~~s~~s~ns~~~n~~L~~kLr~~a~~lR~~~~~~~~~~~~l~ 210 (457)
T 2e01_A 132 SRLVQYLLAAPTEDGGQYSMFLNLVKKY-GLIPKDLYGDLPYSTTASRKWNSLLTTKLREFAETLRTALKERSADDSIIV 210 (457)
T ss_dssp SHHHHHHHHCTTCSCBCHHHHHHHHHHH-CCCBGGGSCSCSHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSCTTSHHHH
T ss_pred chhhhhhccCCCCCCCCHHHHHHHHHHc-CccchhhcCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhHH
Confidence 37899999999999999875 9999999999 311 00
Q ss_pred ------------------CCCCC----cc---c--CCccE-----------------EEe--------------------
Q 043883 212 ------------------GICDS----IK---A--EDHAA-----------------QIT-------------------- 227 (348)
Q Consensus 212 ------------------~~C~~----~~---~--~~~~~-----------------~i~-------------------- 227 (348)
|.|+. .. . ....+ .+.
T Consensus 211 ~~~~~~l~~iy~il~~~LG~pP~~~~~~F~~~~~dkd~~~~~~~~TP~~F~~~~v~~~~~dyV~l~n~p~~py~~~y~ve 290 (457)
T 2e01_A 211 TLREQMQREIFRLMSLFMDIPPVQPNEQFTWEYVDKDKKIHTIKSTPLEFASKYAKLDPSTPVSLINDPRHPYGKLIKID 290 (457)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCSSCTTSCEEEEEECTTSCEEEEEECHHHHHHHTTCCCTTSEEEEECCTTSCTTCEEEET
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCCceEEEEEEcCCCCccCCCcChHHHHHHHcCCCchheEEEeecCCCccCeeEEEe
Confidence 11211 00 0 00000 000
Q ss_pred -----------eeEecCCCC-HHHHHHHHH-cCCeEEEEecCccccccCceEcCCC---------------------CCC
Q 043883 228 -----------NYEDVPPND-EESLLKAVA-NQPVSVAIDASALQFYSGGVFNGYC---------------------ETF 273 (348)
Q Consensus 228 -----------~~~~v~~~~-~~~lk~~l~-~GPV~v~i~~~~f~~Y~~Giy~~~c---------------------~~~ 273 (348)
.|..+|... .+.++.+|+ .|||+++++++.|.+|++|||+..| .+.
T Consensus 291 ~~~N~~~g~~~~y~Nvp~d~l~~~~~~aL~~g~PV~~~~Dv~~~~~~~~GI~~~~~~~~~~fg~~~~m~KaeRl~~~~s~ 370 (457)
T 2e01_A 291 RLGNVLGGDAVIYLNVDNETLSKLVVKRLQNNKAVFFGSHTPKFMDKKTGVMDIELWNYPAIGYNLPQQKASRIRYHESL 370 (457)
T ss_dssp TCCSSTTCCCEEEEECCHHHHHHHHHHHHHTTCCEEEEECTTTTEETTTTEECTTSBCGGGGTCCCCCCHHHHHHTTSCC
T ss_pred ccCCeecCCceeEEEcCHHHHHHHHHHHHHhCCCEEEEEEcCHhHcccCceecccccchhhcCcccccCHHHhhccCCCC
Confidence 133333111 134456677 5799999999978889999997654 245
Q ss_pred CCeEEEEEEeeecCCCc--eEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccceeeec
Q 043883 274 LNHGVTAVGYGTSEEGI--KYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPVSK 334 (348)
Q Consensus 274 ~~Hav~iVGyg~~~~g~--~yWiikNSWG~~WGe~GY~~i~~~~~~~~~~Cgi~~~~~~p~~~ 334 (348)
.+|||+|||||.+++|+ +|||||||||++||++|||+|+|+ .+...++.++++
T Consensus 371 ~~HAmlivGyg~d~~G~~p~yW~VkNSWG~~wG~~GY~~ms~~--------wf~ey~~~ivV~ 425 (457)
T 2e01_A 371 MTAAMLITGCHVDETSKLPLRYRVENSWGKDSGKDGLYVMTQK--------YFEEYCFQIVVD 425 (457)
T ss_dssp CCEEEEEEEEEECTTTCCEEEEEEECSSCTTSTBTTEEEEEHH--------HHHHHEEEEEEE
T ss_pred CCeEEEEEEEEeccCCCccCEEEEEeCccCCcCCCceEEeehh--------hHhhccEEEEec
Confidence 79999999999876788 999999999999999999999985 466666666643
No 43
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis}
Probab=99.96 E-value=5e-29 Score=238.44 Aligned_cols=179 Identities=20% Similarity=0.226 Sum_probs=127.6
Q ss_pred CCCcccccccc-------HHHHHHHHHHHHcCCCcCCCHHHHHhhcCC----------CCCCCCCCCchhHHHHHHHHcC
Q 043883 134 AVTPVKYQGQC-------AVAAVEGINAIKINRLVSLSEQQLVDCATN----------DNNNGCYGGFMDDAFKYIIQNK 196 (348)
Q Consensus 134 ~v~pv~dQg~C-------a~~~~e~~~~i~~~~~~~lS~q~l~dC~~~----------~~~~gC~GG~~~~a~~~~~~~~ 196 (348)
.++||||||+| +++++|+.+++++++.+.||+|+|+||+.. ..+.||+||....|+.|+.+.
T Consensus 21 ~vtpVknQg~cGsCWaFSa~~~lE~~~~~k~~~~~~LSeq~Lvdcd~~ekan~~l~~~g~~~gcdGG~~~~a~~~i~k~- 99 (383)
T 3pw3_A 21 PITSVKNQNRAGTCWCYSSYSFLESELLRMGKGEYDLSEMFTVYNTYLDRADAAVRTHGDVSFSQGGSFYDALYGMETF- 99 (383)
T ss_dssp CCCCCCBCCBSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHHHHHHHHHHHHHTTTCSCCCSCCCHHHHHHHHHHT-
T ss_pred CCCCcccCCCCcHHHHHHhHHHHHHHHHHHcCCCCccChHHHHhhchhhhhhhhhhhccCCCCCCCCCHHHHHHHHHHc-
Confidence 48999999876 688899999999899999999999999741 135799999999999999886
Q ss_pred CCCCCCccc----ccC--C-----------------cCCCCCC------c-----------------ccC----------
Q 043883 197 GITNDAVYS----YEG--M-----------------STGICDS------I-----------------KAE---------- 220 (348)
Q Consensus 197 Gi~~e~~yP----Y~~--~-----------------~~~~C~~------~-----------------~~~---------- 220 (348)
||+++++|| |.. . ....-.. . ++.
T Consensus 100 Givpe~~YP~~~~~~~~s~n~~~m~~~L~~~Lr~~a~~~~r~l~~~~~~~~~~~~~i~~il~~~LG~pP~~F~~~gk~~T 179 (383)
T 3pw3_A 100 GLVPEEEMRPGMMYADTLSNHTELSALTDAMVAAIAKGKLRKLQSDENNAMLWKKAVAAVHQIYLGVPPEKFTYKGKEYT 179 (383)
T ss_dssp CCCBGGGSCTTGGGTCSSCBCHHHHHHHHHHHHHHHSSCCSSCCBCTTCCBHHHHHHHHHHHHHHCCCCSSEEETTEEEC
T ss_pred CcCcHHhCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHhhhhhhchhhHHHHHHHHHHHHHHHhCCCCceEEecCCCcC
Confidence 999999999 221 1 0000000 0 000
Q ss_pred ------CccEEEeeeEecCC-------------------------CCHHHHHHH----HHcC-CeEEEEecC-ccccccC
Q 043883 221 ------DHAAQITNYEDVPP-------------------------NDEESLLKA----VANQ-PVSVAIDAS-ALQFYSG 263 (348)
Q Consensus 221 ------~~~~~i~~~~~v~~-------------------------~~~~~lk~~----l~~G-PV~v~i~~~-~f~~Y~~ 263 (348)
.....+..|..+.. -..+.||++ |..| ||..+-+++ .+.. +.
T Consensus 180 P~~F~~~v~~~~~dyV~l~n~p~~py~~~y~ve~~~N~~~g~~~Nvp~d~l~~~~~~~Lk~G~~V~fg~DV~~~~f~-~~ 258 (383)
T 3pw3_A 180 PKSFFESTGLKASDYVSLTSYTHHPFYTQFPLEIQDNWRHGMSYNLPLDEFMEVFDNAINTGYTIAWGSDVSESGFT-RD 258 (383)
T ss_dssp HHHHHHHHTCCGGGEEEEECCSSSCTTCEEECCCTTCTTCCEEEECCHHHHHHHHHHHHHTTCCEEEEEECCSTTBC-TT
T ss_pred HHHHHHHhCCCccceEEEeeCCCCccCceEEEecCCCccCCccCCcCHHHHHHHHHHHHHcCCcEEEEcccCccccC-CC
Confidence 00001112221100 135666664 3467 999999999 3333 88
Q ss_pred ceEcCC-----------------------------------------------CCCCCCeEEEEEEeeecCCCceEEEEE
Q 043883 264 GVFNGY-----------------------------------------------CETFLNHGVTAVGYGTSEEGIKYWLIK 296 (348)
Q Consensus 264 Giy~~~-----------------------------------------------c~~~~~Hav~iVGyg~~~~g~~yWiik 296 (348)
||...+ -.+..+|||+|||||.+++|++|||||
T Consensus 259 Gi~~~~~~~~~~~~~g~~~~~~~~~~kaer~~~~~~~~e~~~tk~~R~~~~d~~~t~~~Ha~~ivG~~~d~~g~~yw~vk 338 (383)
T 3pw3_A 259 GVAVMPDDEKVQELSGSDMAHWLKLKPEEKKLNTKPQPQKWCTQAERQLAYDNYETTDDHGMQIYGIAKDQEGNEYYMVK 338 (383)
T ss_dssp SEECCBCHHHHHHHSSCCHHHHHTSCHHHHCTTTSCCCBCCCCHHHHHHHHHTTSSCCEEEEEEEEEEECTTCCEEEEEE
T ss_pred ceeeCcchhhHHHhcCcchhhhccCCHHHhhhccCCCcccCCCHHHHHHHhhhccCcCCeEEEEEEEEEcCCCceEEEEE
Confidence 988321 012358999999999877899999999
Q ss_pred cCCCCCCCCCcEEEEEec
Q 043883 297 NSWGQDWGEDGYFRLQRD 314 (348)
Q Consensus 297 NSWG~~WGe~GY~~i~~~ 314 (348)
||||++||++||++|+++
T Consensus 339 NSWg~~~g~~Gy~~m~~~ 356 (383)
T 3pw3_A 339 NSWGTNSKYNGIWYASKA 356 (383)
T ss_dssp CSBCSCSTTTTEEEEEHH
T ss_pred eCCCCCCCcCCeEEecHH
Confidence 999999999999999975
No 44
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii}
Probab=99.78 E-value=4.2e-19 Score=140.17 Aligned_cols=75 Identities=36% Similarity=0.691 Sum_probs=68.7
Q ss_pred ChhhHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEcccCCCCCHHHHHHhhcCcCCC
Q 043883 26 DEGSIAEKFEQWKAQYGRTYKESAENSKRFEIFKDNLVAVERFNNAAIGNRSYTLRLNKFADLTPQEFIASQTGFKMS 103 (348)
Q Consensus 26 ~~~~~~~~f~~f~~~~~k~Y~s~~E~~~R~~iF~~n~~~I~~~N~~~~~~~s~~~g~N~FsD~t~eEf~~~~~~~~~~ 103 (348)
++..+...|++|+.+|+|.|.+.+|+.+|+.||.+|+++|++||++ +.+|++|+|+|+|||.+||++.++|.+..
T Consensus 17 ~~~~~~~~F~~wk~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~hN~~---~~sy~lglN~FaDLT~eEF~~~~lg~~~~ 91 (106)
T 3f75_P 17 KEAHFQDAFSSFQAMYAKSYATEEEKQRRYAIFKNNLVYIHTHNQQ---GYSYSLKMNHFGDLSRDEFRRKYLGFKKS 91 (106)
T ss_dssp CHHHHHHHHHHHHHHHTCCCSSHHHHHHHHHHHHHHHHHHHHHHTS---CCSEEECCCTTTTCCHHHHHHHSCCBCC-
T ss_pred CcHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhc---CCCeeeCCcccccCCHHHHHHHHcCCCCC
Confidence 5667889999999999999999899999999999999999999987 68999999999999999999998886543
No 45
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster}
Probab=99.74 E-value=1.8e-18 Score=130.49 Aligned_cols=69 Identities=28% Similarity=0.606 Sum_probs=61.4
Q ss_pred HHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhcccc-cCCCcEEEEcccCCCCCHHHHHHhhcCcC
Q 043883 31 AEKFEQWKAQYGRTYKESAENSKRFEIFKDNLVAVERFNNAA-IGNRSYTLRLNKFADLTPQEFIASQTGFK 101 (348)
Q Consensus 31 ~~~f~~f~~~~~k~Y~s~~E~~~R~~iF~~n~~~I~~~N~~~-~~~~s~~~g~N~FsD~t~eEf~~~~~~~~ 101 (348)
...|++|+.+|+|.|.+.+|+.+| .||.+|++.|++||+++ .+..+|++|+|+|+|||.+|| +.++|.+
T Consensus 7 ~~~f~~~k~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlT~eEf-~~~~g~~ 76 (80)
T 2l95_A 7 DEEWVEYKSKFDKNYEAEEDLMRR-RIYAESKARIEEHNRKFEKGEVTWKMGINHLADLTPEEF-AQRSGKK 76 (80)
T ss_dssp HHHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHTTGGGTSCCCCCCCCGGGTSSHHHH-HHHHTSC
T ss_pred HHHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHhccCCCCeEecCcccccCCHHHH-HHHhCCC
Confidence 357999999999999888899999 99999999999999864 256789999999999999999 8877754
No 46
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A
Probab=95.95 E-value=0.14 Score=42.95 Aligned_cols=118 Identities=18% Similarity=0.206 Sum_probs=77.1
Q ss_pred ccHHHHHHHHHHHHcCC------------CcCCCHHHHHhhcCCCCCCCCCCCchhHHHHHHHHcCCCCCCCcccccCCc
Q 043883 143 QCAVAAVEGINAIKINR------------LVSLSEQQLVDCATNDNNNGCYGGFMDDAFKYIIQNKGITNDAVYSYEGMS 210 (348)
Q Consensus 143 ~Ca~~~~e~~~~i~~~~------------~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~ 210 (348)
=|+.-++.+++.-.+++ ...+|+|+|.++ |..+...++|++.. |-...
T Consensus 32 WCa~Y~~aAilN~~~nt~~~nA~~iMr~~yPN~s~~~l~~t----------~~~~~q~Iky~~s~-G~~~~--------- 91 (183)
T 1pxv_A 32 WAAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPNC----------ATFPNQMIEYGKSQ-GRDIH--------- 91 (183)
T ss_dssp CHHHHHHHHHHHHHHTCSCCCHHHHHHHHSTTSCTTTGGGC----------CBCHHHHHHHHHHT-TCCCE---------
T ss_pred hHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhhc----------CCCHHHHHHHHHHc-CcChh---------
Confidence 58655555555444432 246788888774 44788999998754 31110
Q ss_pred CCCCCCcccCCccEEEeeeEecCCCCHHHHHHHHH-cCCeEEEEecCccccccCceEcCCCCCCCCeEEEEEEeeecCCC
Q 043883 211 TGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVA-NQPVSVAIDASALQFYSGGVFNGYCETFLNHGVTAVGYGTSEEG 289 (348)
Q Consensus 211 ~~~C~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~-~GPV~v~i~~~~f~~Y~~Giy~~~c~~~~~Hav~iVGyg~~~~g 289 (348)
+ .... .+.+++++.+. +-|+.|... +++........+||++||||-.- ++
T Consensus 92 -------------~----~nr~--ls~neV~~~i~~Nk~I~v~~~---------~v~e~~~~~~~gHA~av~Gya~~-~~ 142 (183)
T 1pxv_A 92 -------------Y----QEGV--PSYNQVDQLTKDNVGIMILAQ---------SVSQNPNDPHLGHALAVVGNAKI-ND 142 (183)
T ss_dssp -------------E----EESC--CCHHHHHHHHHTTCCEEEEEE---------CCCSSTTSCCCEEEEEEEEEEEE-TT
T ss_pred -------------H----hcCC--CCHHHHHHHHhcCCcEEEEcc---------ccccCCCCccCceeEEEEeeeec-CC
Confidence 0 0011 26888999998 569988764 23222233467999999999984 58
Q ss_pred ceEEEEEcCCCCCCCCCcEEEEEec
Q 043883 290 IKYWLIKNSWGQDWGEDGYFRLQRD 314 (348)
Q Consensus 290 ~~yWiikNSWG~~WGe~GY~~i~~~ 314 (348)
.++.+|=|=|-. |++-++.+
T Consensus 143 ~~~y~~WNPW~~-----~~~~~~a~ 162 (183)
T 1pxv_A 143 QEKLIYWNPWDT-----ELSIQDAD 162 (183)
T ss_dssp EEEEEEECTTCS-----SCEEEETT
T ss_pred CeEEEEeCCccC-----CcEeecCC
Confidence 899999888843 77777654
No 47
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1
Probab=95.73 E-value=0.32 Score=40.73 Aligned_cols=109 Identities=14% Similarity=0.142 Sum_probs=70.9
Q ss_pred ccHHHHHHHHHHHHcCC------------CcCCCHHHHHhhcCCCCCCCCCCCchhHHHHHHHHcCCCCCCCcccccCCc
Q 043883 143 QCAVAAVEGINAIKINR------------LVSLSEQQLVDCATNDNNNGCYGGFMDDAFKYIIQNKGITNDAVYSYEGMS 210 (348)
Q Consensus 143 ~Ca~~~~e~~~~i~~~~------------~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~ 210 (348)
=|+.-++.+++.-..++ ...+|+++|..+. ..+...++|++.. |-..
T Consensus 23 WCa~Ya~aailN~~~~~~~~~A~~imr~~yPn~S~~~l~~~~----------~t~~e~iky~~s~-g~~~---------- 81 (174)
T 1cv8_A 23 WCAGYTMSALLNATYNTNKYHAEAVMRFLHPNLQGQQFQFTG----------LTPREMIYFGQTQ-GRSP---------- 81 (174)
T ss_dssp CHHHHHHHHHHHHHHTCCCCCHHHHHHHHCSSCCHHHHHHCC----------CCHHHHHHHHHHT-TCCC----------
T ss_pred hHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCCHHHHhhcC----------CCHHHHHHHHHHc-CCCh----------
Confidence 59555555555444332 3579999999654 3688889998765 2100
Q ss_pred CCCCCCcccCCccEEEeeeEecCCCCHHHHHHHHH-cCCeEEEEecCccccccCceEcCCCCCCCCeEEEEEEeeecCCC
Q 043883 211 TGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVA-NQPVSVAIDASALQFYSGGVFNGYCETFLNHGVTAVGYGTSEEG 289 (348)
Q Consensus 211 ~~~C~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~-~GPV~v~i~~~~f~~Y~~Giy~~~c~~~~~Hav~iVGyg~~~~g 289 (348)
.. .. .. .+.+++++.+. +-|+.|..+-. ..+.+...+||++||||-.-.+|
T Consensus 82 ----~~--~n----------~~--ls~~eV~~~~~~nk~i~i~~~~v----------e~~~~~~~gHAlav~Gy~~~~ng 133 (174)
T 1cv8_A 82 ----QL--LN----------RM--TTYNEVDNLTKNNKGIAILGSRV----------ESRNGMHAGHAMAVVGNAKLNNG 133 (174)
T ss_dssp ----EE--ES----------SC--CCHHHHHHHHHTTCCEEEEEEES----------SCBTTBCCEEEEEEEEEEEETTS
T ss_pred ----hh--hc----------CC--CCHHHHHHHHhcCCceEEEcccc----------cCCCCCCCceeEEEEeeeeecCC
Confidence 00 00 01 26788999998 45888766421 01122367999999999986578
Q ss_pred ceEEEEEcCCC
Q 043883 290 IKYWLIKNSWG 300 (348)
Q Consensus 290 ~~yWiikNSWG 300 (348)
.+|.++=|=|-
T Consensus 134 ~~~y~~WNPW~ 144 (174)
T 1cv8_A 134 QEVIIIWNPWD 144 (174)
T ss_dssp CEEEEEECTTC
T ss_pred ceEEEEeCCcc
Confidence 89999999884
No 48
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4
Probab=95.41 E-value=0.3 Score=45.37 Aligned_cols=118 Identities=19% Similarity=0.246 Sum_probs=75.3
Q ss_pred ccHHHHHHHHHHHHcCC------------CcCCCHHHHHhhcCCCCCCCCCCCchhHHHHHHHHcCCCCCCCcccccCCc
Q 043883 143 QCAVAAVEGINAIKINR------------LVSLSEQQLVDCATNDNNNGCYGGFMDDAFKYIIQNKGITNDAVYSYEGMS 210 (348)
Q Consensus 143 ~Ca~~~~e~~~~i~~~~------------~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~ 210 (348)
-|+.-++.+++.-..++ ...+|+++|.++ |..+...++|++.. |..
T Consensus 208 WCa~Ya~aailN~~~~t~~~nA~~iMr~~yPN~S~~~l~~t----------s~~~~q~Iky~qsy-G~~----------- 265 (367)
T 1x9y_A 208 WCAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPNC----------ATFPNQMIEYGKSQ-GRD----------- 265 (367)
T ss_dssp CHHHHHHHHHHHHHTTCSCCCHHHHHHHHCTTSCTTTGGGC----------CCCHHHHHHHHHHT-TEE-----------
T ss_pred hHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhhc----------CCCHHHHHHHHHHh-Ccc-----------
Confidence 48666666655544443 246777777774 44688889998743 321
Q ss_pred CCCCCCcccCCccEEEeeeEecCCCCHHHHHHHHH-cCCeEEEEecCccccccCceEcCCCCCCCCeEEEEEEeeecCCC
Q 043883 211 TGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVA-NQPVSVAIDASALQFYSGGVFNGYCETFLNHGVTAVGYGTSEEG 289 (348)
Q Consensus 211 ~~~C~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~-~GPV~v~i~~~~f~~Y~~Giy~~~c~~~~~Hav~iVGyg~~~~g 289 (348)
+.-.... .+.+++++.+. +-||.|.+... .....+...+||++||||-.. ++
T Consensus 266 ---------------~~~~n~~--ls~deVk~~id~Nk~I~v~~~~v---------~~~~n~~~~gHAlavvGyA~~-~~ 318 (367)
T 1x9y_A 266 ---------------IHYQEGV--PSYNQVDQLTKDNVGIMILAQSV---------SQNPNDPHLGHALAVVGNAKI-ND 318 (367)
T ss_dssp ---------------EEEEESC--CCHHHHHHHHHTTCCEEEEEEET---------TSCSSSCCCSEEEEEEEEEEE-TT
T ss_pred ---------------hhhhcCC--CCHHHHHHHHhcCCcEEEEcccc---------ccCCCCccCceeEEEEecccc-CC
Confidence 1111112 26788899888 67999887542 111123467999999999775 48
Q ss_pred ceEEEEEcCCCCCCCCCcEEEEEec
Q 043883 290 IKYWLIKNSWGQDWGEDGYFRLQRD 314 (348)
Q Consensus 290 ~~yWiikNSWG~~WGe~GY~~i~~~ 314 (348)
.+|.++-|=|-. +++-++..
T Consensus 319 ~~~y~~WNPW~~-----~~~~~sa~ 338 (367)
T 1x9y_A 319 QEKLIYWNPWDT-----ELSIQDAD 338 (367)
T ss_dssp EEEEEEECTTCS-----SCEEEETT
T ss_pred CcEEEEecCccC-----CceeecCC
Confidence 899999888743 36666543
No 49
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis}
Probab=90.49 E-value=1 Score=39.92 Aligned_cols=62 Identities=26% Similarity=0.403 Sum_probs=39.0
Q ss_pred EecCCCCHHHHHHHHHcC-CeEEEEecC-c------cccc--cCceEcCCCCCCCCeEEEEEEeeecCCCceEEEEEcCC
Q 043883 230 EDVPPNDEESLLKAVANQ-PVSVAIDAS-A------LQFY--SGGVFNGYCETFLNHGVTAVGYGTSEEGIKYWLIKNSW 299 (348)
Q Consensus 230 ~~v~~~~~~~lk~~l~~G-PV~v~i~~~-~------f~~Y--~~Giy~~~c~~~~~Hav~iVGyg~~~~g~~yWiikNSW 299 (348)
..++..+.++|++.|..| ||.|-.... . |..+ .+|-... ...+|+|+|+||+.. ..+|-..+
T Consensus 125 ~dltG~sl~~L~~~I~~G~PVIv~~t~~~~p~~~~~~~~W~~~~G~~~~---~~~~H~VVl~GYd~~-----~vyi~DP~ 196 (236)
T 3erv_A 125 VDLTGKSIEELYKSVKAGQPVVIITNATFAPLDEDEFTTWETNNGDVSI---TYNEHCVVLIGYDQE-----SVYIRDPL 196 (236)
T ss_dssp EECTTSCHHHHHHHHHTTCCEEEEEETTSSCCCGGGCEEEEETTEEEEE---CTTEEEEEEEEECSS-----EEEEECTT
T ss_pred eecCCCCHHHHHHHHHCCCeEEEEEeCCcccccccccceeecCCCceee---ccCCeEEEEEEEeCC-----EEEEECCC
Confidence 345656899999999988 999977653 1 1111 1222111 235899999999852 44455544
No 50
>3bb7_A Interpain A; cysteine protease, zymogen activation, bacterial odontopatho hydrolase; 1.50A {Prevotella intermedia} PDB: 3bba_A
Probab=48.10 E-value=36 Score=31.26 Aligned_cols=59 Identities=15% Similarity=0.356 Sum_probs=37.1
Q ss_pred HHHHHHHHc-CCeEEEEecCccccccCceEcCCCCCCCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEe
Q 043883 238 ESLLKAVAN-QPVSVAIDASALQFYSGGVFNGYCETFLNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQR 313 (348)
Q Consensus 238 ~~lk~~l~~-GPV~v~i~~~~f~~Y~~Giy~~~c~~~~~Hav~iVGyg~~~~g~~yWiikNSWG~~WGe~GY~~i~~ 313 (348)
+.|++.|.. .||.+.-.-..+ . +...+||.+|=||..+ .||=|-=.||-. .+|||.+..
T Consensus 239 ~~i~~eL~~~rPV~~~G~~~~~------~-----~~~~GHafV~DGY~~~----~~~H~NwGWgG~--~nGyy~l~~ 298 (321)
T 3bb7_A 239 DIVFSELTKGHPLIYGGVSPGS------M-----GQDAGHAFVIDGYNKA----GLVSVNWGWNGD--VDGYYKIDL 298 (321)
T ss_dssp HHHHHHHHTTCCEEEEEC------------------CCCEEEEEEEECTT----SCEEEECSSTTT--TCEEECCTT
T ss_pred HHHHHHHHhCCCEEEEEecCCC------C-----CCCCceEEEEccccCC----CeEEEecCCCCC--CCceEeccC
Confidence 467788885 598764321111 0 1257999999999852 477776666522 489999864
No 51
>1dki_A Pyrogenic exotoxin B zymogen; cysteine protease, papain-like; 1.60A {Streptococcus pyogenes} SCOP: d.3.1.1 PDB: 1pvj_A*
Probab=47.76 E-value=30 Score=32.47 Aligned_cols=54 Identities=24% Similarity=0.425 Sum_probs=36.5
Q ss_pred HHHHHHHHc-CCeEEEEecCccccccCceEcCCCCCCCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEe
Q 043883 238 ESLLKAVAN-QPVSVAIDASALQFYSGGVFNGYCETFLNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQR 313 (348)
Q Consensus 238 ~~lk~~l~~-GPV~v~i~~~~f~~Y~~Giy~~~c~~~~~Hav~iVGyg~~~~g~~yWiikNSWG~~WGe~GY~~i~~ 313 (348)
+.|+..|.. .||.+.-. +...+||.+|=||..+ .||=|==.||-. .+|||.+.-
T Consensus 290 ~~i~~eL~~~rPV~~~G~----------------~~~gGHAfV~DGy~~~----~~~H~NwGWgG~--~nGyy~l~~ 344 (371)
T 1dki_A 290 AQIDKELSQNQPVYYQGV----------------GKVGGHAFVIDGADGR----NFYHVNWGWGGV--SDGFFRLDA 344 (371)
T ss_dssp HHHHHHHHTTCCEEEEEE----------------ETTEEEEEEEEEECSS----SEEEEECSSTTT--TCEEEESCC
T ss_pred HHHHHHHHcCCCEEEEee----------------cCCCceEEEECcccCC----CeEEEEeCcCCC--CCcceeccC
Confidence 457778885 59875421 0127999999999752 477666555532 589999863
No 52
>4d8b_A Streptopain; papain fold, cysteine protease, secreted, hydrolase; 1.06A {Streptococcus pyogenes} PDB: 4d8e_A* 4d8i_A* 2uzj_A* 2jtc_A
Probab=43.40 E-value=30 Score=30.79 Aligned_cols=54 Identities=24% Similarity=0.425 Sum_probs=37.0
Q ss_pred HHHHHHHHc-CCeEEEEecCccccccCceEcCCCCCCCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEe
Q 043883 238 ESLLKAVAN-QPVSVAIDASALQFYSGGVFNGYCETFLNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQR 313 (348)
Q Consensus 238 ~~lk~~l~~-GPV~v~i~~~~f~~Y~~Giy~~~c~~~~~Hav~iVGyg~~~~g~~yWiikNSWG~~WGe~GY~~i~~ 313 (348)
+.|+..|.. .||.++-. ....+||.+|=||..+ .|+-|-=.||-. .+|||.|..
T Consensus 172 ~~I~~eL~~grPV~~~G~----------------~~~gGHAwViDGY~~~----~~~H~NwGWgG~--~nGYy~l~~ 226 (261)
T 4d8b_A 172 AQIDKELSQNQPVYYQGV----------------GKVGGHAFVIDGADGR----NFYHVNWGWGGV--SDGFFRLDA 226 (261)
T ss_dssp HHHHHHHHTTCCEEEEEE----------------ETTEEEEEEEEEEESS----SCEEEECSSTTT--TCEEECTTC
T ss_pred HHHHHHHHcCCCEEEEee----------------cCCCceEEEEcccccC----CEEEEEcCCCCC--CCceeeccc
Confidence 567788885 59987641 1257999999999852 366665455421 689999853
Done!