Query 043885
Match_columns 765
No_of_seqs 414 out of 1826
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 15:55:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043885.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043885hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1w6k_A Lanosterol synthase; cy 100.0 9E-151 3E-155 1340.2 60.9 650 96-761 71-726 (732)
2 2sqc_A Squalene-hopene cyclase 100.0 6E-132 2E-136 1165.9 55.9 616 94-759 7-629 (631)
3 2sqc_A Squalene-hopene cyclase 100.0 1.8E-41 6.2E-46 398.3 26.4 506 100-695 59-624 (631)
4 1w6k_A Lanosterol synthase; cy 100.0 1.7E-29 5.7E-34 300.2 30.2 517 101-695 123-719 (732)
5 2h6f_B Protein farnesyltransfe 99.9 9.4E-28 3.2E-32 268.6 15.2 223 443-736 75-300 (437)
6 1n4q_B Geranyltransferase type 99.9 6.9E-26 2.3E-30 249.0 16.6 209 490-736 51-272 (377)
7 3q7a_B Farnesyltransferase bet 99.9 3.1E-23 1.1E-27 232.7 20.4 203 509-736 103-326 (520)
8 3dss_B Geranylgeranyl transfer 99.9 4.1E-23 1.4E-27 224.0 17.4 194 487-736 47-241 (331)
9 3dss_B Geranylgeranyl transfer 99.9 3E-22 1E-26 217.2 22.3 280 391-753 19-300 (331)
10 1r76_A Pectate lyase; A-helica 99.9 5.5E-23 1.9E-27 224.3 12.1 202 441-661 81-334 (408)
11 2wy7_A Complement C3D fragment 99.9 5.8E-22 2E-26 213.4 18.2 199 515-760 54-295 (310)
12 2h6f_B Protein farnesyltransfe 99.9 4.7E-23 1.6E-27 230.6 9.5 208 465-725 31-242 (437)
13 1qqf_A Protein (complement C3D 99.9 2.6E-21 8.7E-26 205.0 19.8 197 515-758 38-277 (277)
14 1gxm_A Pectate lyase; mechanis 99.9 1.6E-22 5.4E-27 215.1 6.8 186 447-655 37-251 (332)
15 1hzf_A Complement factor C4A; 99.9 1.4E-21 4.8E-26 215.3 14.4 234 472-758 51-363 (367)
16 1n4q_B Geranyltransferase type 99.7 1.6E-16 5.4E-21 174.7 23.5 294 391-753 21-331 (377)
17 2pn5_A TEP1R, thioester-contai 99.7 2.9E-16 9.9E-21 198.9 15.3 197 515-759 872-1106(1325)
18 2hr0_B Complement C3 alpha' ch 99.6 1.6E-15 5.6E-20 185.2 18.7 199 515-760 299-540 (915)
19 4acq_A Alpha-2-macroglobulin; 99.6 1.5E-15 5.1E-20 192.6 16.3 206 515-760 983-1247(1451)
20 1r76_A Pectate lyase; A-helica 99.6 2.6E-15 9E-20 164.0 15.1 208 516-724 82-335 (408)
21 1hzf_A Complement factor C4A; 99.6 2.7E-14 9.3E-19 157.2 20.5 238 402-695 46-359 (367)
22 1qqf_A Protein (complement C3D 99.6 1.9E-14 6.3E-19 152.3 18.4 199 440-695 37-273 (277)
23 2wy7_A Complement C3D fragment 99.6 7.5E-14 2.6E-18 150.0 18.3 220 420-696 25-290 (310)
24 3q7a_B Farnesyltransferase bet 99.5 9.1E-13 3.1E-17 148.2 21.9 222 392-663 63-317 (520)
25 1gxm_A Pectate lyase; mechanis 99.3 1.8E-12 6.3E-17 138.0 9.5 183 521-717 37-251 (332)
26 2hr0_B Complement C3 alpha' ch 99.2 1.4E-10 4.7E-15 141.8 20.8 222 418-695 268-534 (915)
27 3dra_B Geranylgeranyltransfera 99.2 3.8E-10 1.3E-14 124.0 17.0 171 513-717 51-252 (390)
28 3dra_B Geranylgeranyltransfera 99.1 7.5E-09 2.6E-13 113.7 23.8 310 392-755 6-361 (390)
29 4fxk_B Complement C4-A alpha c 99.1 2.4E-08 8.2E-13 119.9 30.4 280 418-759 337-641 (767)
30 4acq_A Alpha-2-macroglobulin; 99.1 1.9E-09 6.5E-14 137.1 18.8 217 420-695 957-1241(1451)
31 2pn5_A TEP1R, thioester-contai 98.9 9.9E-09 3.4E-13 130.2 19.2 216 418-695 844-1101(1325)
32 2b39_A C3; thioester, immune d 98.9 5.2E-08 1.8E-12 125.9 24.5 257 418-759 1015-1286(1661)
33 3cu7_A Complement C5; Mg domai 98.8 2.3E-07 7.9E-12 120.1 24.5 220 483-760 1072-1306(1676)
34 2bb6_A TCII, TC II, transcobal 98.7 1.8E-07 6E-12 103.1 17.6 147 489-698 138-287 (414)
35 2bb6_A TCII, TC II, transcobal 98.7 1.7E-07 5.7E-12 103.3 14.3 150 417-637 133-286 (414)
36 2pmv_A Gastric intrinsic facto 98.7 1.2E-07 3.9E-12 103.9 12.8 127 516-698 131-263 (399)
37 3prx_B Cobra venom factor; imm 98.6 8.2E-09 2.8E-13 132.0 0.0 254 420-759 1001-1268(1642)
38 4fxk_B Complement C4-A alpha c 98.3 3.4E-05 1.2E-09 92.5 23.3 232 392-695 370-636 (767)
39 2b39_A C3; thioester, immune d 98.3 2.7E-05 9.1E-10 100.8 22.3 227 392-695 1048-1281(1661)
40 2pmv_A Gastric intrinsic facto 98.2 2E-06 7E-11 94.1 9.3 119 568-724 117-246 (399)
41 3cu7_A Complement C5; Mg domai 98.1 5.1E-05 1.7E-09 98.4 19.0 227 392-695 1049-1300(1676)
42 3k11_A Putative glycosyl hydro 98.0 0.00023 7.9E-09 79.6 19.1 327 387-758 27-414 (445)
43 3prx_B Cobra venom factor; imm 97.6 1.1E-05 3.8E-10 103.4 0.0 124 590-715 1028-1162(1642)
44 3pmm_A Putative cytoplasmic pr 97.2 0.02 6.7E-07 62.9 20.1 284 417-758 64-381 (382)
45 3sdr_A Alpha-bisabolene syntha 97.1 0.014 4.7E-07 70.0 19.1 87 115-212 72-161 (817)
46 3sdr_A Alpha-bisabolene syntha 96.9 0.0011 3.9E-08 79.2 8.0 105 593-715 55-162 (817)
47 3s9v_A Abietadiene synthase, c 96.8 0.026 9E-07 67.2 18.4 90 595-698 245-336 (785)
48 3p5p_A Taxadiene synthase; cla 96.8 0.0049 1.7E-07 73.3 12.1 256 392-718 10-282 (764)
49 3s9v_A Abietadiene synthase, c 96.8 0.0023 8E-08 76.2 8.9 83 617-715 53-135 (785)
50 3pya_A ENT-copalyl diphosphate 96.6 0.0034 1.2E-07 74.0 8.6 81 617-715 31-111 (727)
51 3pya_A ENT-copalyl diphosphate 96.6 0.098 3.3E-06 61.7 20.5 257 389-718 8-281 (727)
52 3p5p_A Taxadiene synthase; cla 96.5 0.0028 9.6E-08 75.3 6.9 85 617-716 30-115 (764)
53 1nc5_A Hypothetical protein YT 96.4 0.074 2.5E-06 58.0 17.0 132 620-758 212-368 (373)
54 3pmm_A Putative cytoplasmic pr 96.2 0.095 3.2E-06 57.4 16.5 100 514-633 262-377 (382)
55 1nc5_A Hypothetical protein YT 95.8 0.39 1.4E-05 52.2 19.4 128 568-695 215-364 (373)
56 3k11_A Putative glycosyl hydro 95.0 0.47 1.6E-05 52.9 16.7 211 419-663 143-374 (445)
57 1lf6_A Glucoamylase; (alpha/al 94.6 0.59 2E-05 55.0 17.1 86 421-528 343-429 (684)
58 2gz6_A N-acetyl-D-glucosamine 94.4 1.5 5E-05 47.4 18.5 154 417-604 49-207 (388)
59 2fba_A Glucoamylase Glu1; (alp 92.2 2.9 9.9E-05 47.2 16.8 73 421-500 69-157 (492)
60 3gt5_A N-acetylglucosamine 2-e 91.5 7.1 0.00024 42.5 18.6 98 418-534 49-156 (402)
61 2gz6_A N-acetyl-D-glucosamine 91.1 0.95 3.3E-05 48.9 11.0 126 517-660 17-158 (388)
62 1ulv_A Glucodextranase; GH fam 90.9 2.6 8.9E-05 51.8 15.7 91 419-527 330-420 (1020)
63 2vn4_A Glucoamylase; hydrolase 90.0 15 0.0005 42.5 20.1 113 421-540 53-181 (599)
64 2ahf_A Unsaturated glucuronyl 89.6 4.1 0.00014 44.3 14.4 198 407-633 126-364 (377)
65 1gai_A Glucoamylase-471; hydro 89.2 6.6 0.00022 44.0 15.9 104 421-539 54-179 (472)
66 2zbl_A Putative isomerase; N-a 86.7 22 0.00076 38.8 18.2 100 418-535 48-155 (421)
67 3gt5_A N-acetylglucosamine 2-e 84.2 3.8 0.00013 44.7 10.4 131 515-662 13-158 (402)
68 2zzr_A Unsaturated glucuronyl 83.4 30 0.001 37.8 16.9 203 406-633 151-389 (397)
69 2ahf_A Unsaturated glucuronyl 82.6 11 0.00037 41.0 12.9 221 509-757 105-367 (377)
70 1ulv_A Glucodextranase; GH fam 79.3 9.1 0.00031 47.0 12.1 112 488-631 332-448 (1020)
71 2zzr_A Unsaturated glucuronyl 78.9 20 0.00068 39.2 13.5 221 509-757 131-392 (397)
72 1fp3_A N-acyl-D-glucosamine 2- 77.8 64 0.0022 34.5 17.4 101 417-534 52-166 (402)
73 1lf6_A Glucoamylase; (alpha/al 76.7 17 0.00058 42.6 13.1 94 622-725 344-440 (684)
74 2vn4_A Glucoamylase; hydrolase 72.4 13 0.00045 42.9 10.4 132 488-632 53-198 (599)
75 3rrs_A Cellobiose phosphorylas 72.3 69 0.0024 38.3 16.9 101 420-532 366-479 (822)
76 2fba_A Glucoamylase Glu1; (alp 68.4 13 0.00044 41.9 8.9 127 488-632 69-229 (492)
77 1fp3_A N-acyl-D-glucosamine 2- 67.4 18 0.0006 39.1 9.6 128 517-660 19-166 (402)
78 3h7l_A Endoglucanase; dehydrog 65.0 29 0.00098 39.9 11.0 85 516-605 195-291 (586)
79 3qde_A Cellobiose phosphorylas 63.3 1.7E+02 0.0059 34.8 17.9 101 420-532 359-472 (811)
80 2zbl_A Putative isomerase; N-a 63.3 60 0.0021 35.2 13.0 93 566-663 51-157 (421)
81 3rrs_A Cellobiose phosphorylas 53.3 2.2E+02 0.0075 33.9 16.4 86 513-609 380-479 (822)
82 2p0v_A Hypothetical protein BT 51.6 50 0.0017 36.9 9.6 86 630-725 355-440 (489)
83 2hep_A UPF0291 protein YNZC; S 50.0 8.8 0.0003 32.6 2.5 50 34-102 22-71 (85)
84 3ren_A Glycosyl hydrolase, fam 48.5 2.8E+02 0.0095 29.6 17.2 264 423-754 65-348 (350)
85 3k7x_A LIN0763 protein; Q92DQ0 45.2 2.3E+02 0.008 29.9 13.6 163 420-632 45-224 (349)
86 1gai_A Glucoamylase-471; hydro 41.7 63 0.0021 36.1 8.6 42 590-632 154-197 (472)
87 1wgn_A UBAP1, ubiquitin associ 34.8 34 0.0012 27.3 3.5 29 624-658 34-62 (63)
88 2dna_A Unnamed protein product 31.2 44 0.0015 27.1 3.8 28 625-658 36-63 (67)
89 1v7w_A Chitobiose phosphorylas 30.3 99 0.0034 36.6 8.4 250 489-754 350-656 (807)
90 3eu8_A Putative glucoamylase; 29.9 2.1E+02 0.0072 31.4 10.1 77 422-502 66-147 (430)
91 3e6u_A LANC-like protein 1; al 29.1 75 0.0026 34.5 6.6 49 93-141 247-302 (411)
92 1rwh_A Chondroitin AC lyase; c 28.4 4.3E+02 0.015 31.1 13.3 21 585-605 94-114 (757)
93 2dna_A Unnamed protein product 27.3 61 0.0021 26.2 4.0 28 687-720 36-63 (67)
94 1ks8_A Endo-B-1,4-glucanase; c 27.2 6.3E+02 0.022 27.4 16.4 21 514-534 93-113 (433)
95 3e6u_A LANC-like protein 1; al 26.1 6.3E+02 0.022 27.0 20.5 46 565-613 230-275 (411)
96 1cb8_A Protein (chondroitinase 25.0 3.9E+02 0.013 31.0 12.0 27 585-611 78-104 (678)
97 1wgn_A UBAP1, ubiquitin associ 24.9 73 0.0025 25.4 3.8 27 687-719 35-61 (63)
98 3ff5_A PEX14P, peroxisomal bio 24.8 1.6E+02 0.0055 22.8 5.7 41 33-75 3-43 (54)
99 2wco_A Putative secreted lyase 23.9 2.1E+02 0.0073 33.8 9.6 20 585-604 109-128 (765)
100 3h7l_A Endoglucanase; dehydrog 23.6 4.6E+02 0.016 29.9 11.9 146 588-759 190-380 (586)
101 3qde_A Cellobiose phosphorylas 23.5 3.7E+02 0.013 31.9 11.6 86 513-609 373-472 (811)
102 2p0v_A Hypothetical protein BT 22.6 6.4E+02 0.022 28.0 12.4 77 591-672 365-449 (489)
103 2knz_A Ubiquilin-4; cytoplasm, 22.6 1.4E+02 0.0049 22.5 5.2 43 389-454 8-51 (53)
104 3a0o_A Oligo alginate lyase; a 21.4 1.1E+02 0.0038 35.9 6.5 86 567-659 317-410 (776)
No 1
>1w6k_A Lanosterol synthase; cyclase, cholesterol, monotopic membrane protein, B-octyl-glucoside, isomerase, steroid biosynthesis; HET: BOG LAN; 2.1A {Homo sapiens} SCOP: a.102.4.2 a.102.4.2 PDB: 1w6j_A*
Probab=100.00 E-value=8.6e-151 Score=1340.19 Aligned_cols=650 Identities=45% Similarity=0.853 Sum_probs=613.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCccccCCCCCcchHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhccCCCCccccccCC
Q 043885 96 EAVNTTLRRALRFYSTLQSEDGFWPGDYAGPLFLLPCLVIGLYITGDLNTILQVEYRREMLRYLYNHQNEDGGWGLHIEG 175 (765)
Q Consensus 96 e~~~~al~~a~~~l~~~Q~~DG~W~~~~~g~~~~~~~~vial~~~g~~~~~~~~~~~~~~~ryl~~~Qn~DGGWgl~~~~ 175 (765)
|++.++|+++++||+++|.+||||++|++||+|++|++||++|++| ++++++++++++|||++|||+|||||+|+++
T Consensus 71 ~~~~~a~~~~~~~~~~~Q~~dG~W~~~~~~~~~~~~~~v~~~~~~~---~~~~~~~~~~~~~yl~~~Q~~DGgWgl~~~~ 147 (732)
T 1w6k_A 71 HTAFEGALNGMTFYVGLQAEDGHWTGDYGGPLFLLPGLLITCHVAR---IPLPAGYREEIVRYLRSVQLPDGGWGLHIED 147 (732)
T ss_dssp CSHHHHHHHHHHHHHTTBCTTSCBCCCCCCBSSHHHHHHHHHHHHT---CCCCTTHHHHHHHHHHHHSCTTSCBCSBTTS
T ss_pred ccHHHHHHHHHHHHHHhcCCCCCccccccCchhhhHHHHHHHHHhC---CCCCHHHHHHHHHHHHHhcCCCCCccCCcCC
Confidence 3677899999999999999999999999999999999999999999 6778889999999999999999999999999
Q ss_pred CcchhhhHHHHHHHHHcCCCCCCCchHHHHHHHHHHhcCCCCCCchhHHHHHHHhccccCCCCCCCCcchhccCCCCCCC
Q 043885 176 ESTMLNTVLSYVGLRLLGERMDGGDGAIEKARKWILGRGGATYIPSWGKIWLSVLGVYDWSGNNPIPPETWLLPDFLPTH 255 (765)
Q Consensus 176 ~s~m~~Tv~~Y~aLrllG~~~~~~~~~~~rAr~~Il~~GGa~~~~~w~k~~Lal~G~~~W~~~~~lPpEl~llP~~~P~~ 255 (765)
+|+||+||+||+|||++|+++++ |+|+|||+||++|||++++|+|||||||++|+|+|+++|+|||||||||+|||||
T Consensus 148 ~s~~~~T~~~Y~aLrl~G~~~~~--~~~~~ar~~i~~~GG~~~~~~~~k~~La~~g~~~W~~~~~~PpE~~llP~~~p~~ 225 (732)
T 1w6k_A 148 KSTVFGTALNYVSLRILGVGPDD--PDLVRARNILHKKGGAVAIPSWGKFWLAVLNVYSWEGLNTLFPEMWLFPDWAPAH 225 (732)
T ss_dssp CCBHHHHHHHHHHHHHTTCCTTS--HHHHHHHHHHHHTTCGGGCCHHHHHHHHHTTSSCGGGSCCCCGGGGGSCTTSTTC
T ss_pred CccHHHHHHHHHHHHHcCCCCCc--HHHHHHHHHHHHcCCcccCcHHHHHHHHHcCCCCcccCCCCCHHHHHccCcCCCC
Confidence 99999999999999999999997 9999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccccchhhhHHHHhccccccccCchhhhhhhhhccCCCCccchhhhhhhccccccCCCCchhHHHHHHHHHHHhh
Q 043885 256 PGRMWCHTRLVLLPTSYLYGKRFVGKINSLVLCLREELYTRPYEKIDWNRARFLCAQEDLYRQHPMFQDMLWNFSHKVAE 335 (765)
Q Consensus 256 ~~~~~~~~R~v~~pmsyl~~~r~~~~~~p~~~~lr~EL~~~p~~~i~w~~~R~~~a~~d~~~p~~~~~~~~~~~l~~~~e 335 (765)
|++||||||+||+||+|||++||++|++|++.+||+|||++||++|+|.++|+.|+++|+|+|++.+++.++..| +++|
T Consensus 226 ~~~~~~~~R~~~~p~~~l~~~r~~~~~~~~~~~lr~el~~~~~~~~~~~~~r~~~~~~d~~~p~~~~~~~~~~~l-~~~e 304 (732)
T 1w6k_A 226 PSTLWCHCRQVYLPMSYCYAVRLSAAEDPLVQSLRQELYVEDFASIDWLAQRNNVAPDELYTPHSWLLRVVYALL-NLYE 304 (732)
T ss_dssp GGGSCHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHTTSCSSCGGGCCSGGGTTCCCGGGCSSCCCHHHHHHHHHH-HHHH
T ss_pred HHHHHHHHHHHHHhHHHHhhcCCCCCCCcchhhHHHHhcCCCccccchhhhccccccccccCCHHHHHHHHHHHH-HHhh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998887 7788
Q ss_pred hhhccCCCHHHHHHHHHHHHHhhhhcCCCccceeechHHHHHHHhhccccC-CCcHHHHHHHHHHhhhheeccCCceeec
Q 043885 336 PLLKKWPFSKIRQIALDTVMKHIHCEDENTQYICIAGVNKVLNMLCRWVED-PNSEAYKHHLARIKDYLWVAEDGMKMQA 414 (765)
Q Consensus 336 ~~~~~~p~~~lr~~Al~~~~~~i~~ede~t~y~~i~~v~~~l~ml~~~~~~-p~~~~~~~~l~~l~~~l~~~~dG~~~q~ 414 (765)
|++ ++++|++|++++++||++|+++++|+||+||++++||++|+.++ |++|.+++|+++|.+|+|+.+|||++|+
T Consensus 305 ~~~----~~~lr~~a~~~~~~~i~~~~~~~~~~~i~pv~~~l~~l~~~~~~G~~~~~~~~~l~~l~~~l~~~~dG~~~q~ 380 (732)
T 1w6k_A 305 HHH----SAHLRQRAVQKLYEHIVADDRFTKSISIGPISKTINMLVRWYVDGPASTAFQEHVSRIPDYLWMGLDGMKMQG 380 (732)
T ss_dssp HTC----CHHHHHHHHHHHHHHHHHHHHHHTTCCSSHHHHHHHHHHHHHHHCTTSHHHHHHHHTSGGGEEEETTEEEECS
T ss_pred hcC----cHHHHHHHHHHHHHHHHhhccCCCCcccchhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhheeCCCCceeCC
Confidence 765 47899999999999999999999999999999999999998764 9999999999999999999999999999
Q ss_pred cCCCchhHHHHHHHHHHHcCCCC--cchHHHHHHHHHHHhhccccCCCCCCccccCCCCCCCCCCCCCCCCCCChhhhHH
Q 043885 415 YNGSQLWDTAFAVHAILSTNLVD--EYGSMLKKANNYIKTTQVRTKSFEDPSCWYRHEFQEGWPFSSLDNGWIATDTTAE 492 (765)
Q Consensus 415 ~~gs~~WDTalai~AL~~ag~~~--~~~~~l~kA~~~L~~~Q~~~~~~Gd~~~~~~~~~~GgW~fs~~~~~~pd~D~TA~ 492 (765)
+||||+|||+|+++||.++|+++ ++.+.++||++||+++|+++++ |||..+|||.++|||+|++.+++|||+||||+
T Consensus 381 ~~gs~vwdTalal~AL~~ag~~~~~~~~~~l~ka~~~L~~~Q~~~~~-~d~~~~~r~~~~GGW~f~~~~~~~pd~d~TA~ 459 (732)
T 1w6k_A 381 TNGSQIWDTAFAIQALLEAGGHHRPEFSSCLQKAHEFLRLSQVPDNP-PDYQKYYRQMRKGGFSFSTLDCGWIVSDCTAE 459 (732)
T ss_dssp SSCCHHHHHHHHHHHHHHTTGGGCGGGHHHHHHHHHHHHHHSCCCCC-TTGGGGTCCCCTTCCBSSCTTTCCBCHHHHHH
T ss_pred CCCCchHHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHhcccccC-CcccccccCCCCCeecCCCCCCCCCccccHHH
Confidence 99999999999999999999865 4689999999999999998754 78888999999999999999999999999999
Q ss_pred HHHHHHHhccccccccCCCCChHHHHHHHHHHHhccccCCCccccccCCCcchhhccccccccccccccCCccCcHHHHH
Q 043885 493 GLNVSVLLSEMSYDLVGEAIPLNRLFEAVNVVLSLQNSSGGVASYERTRSYAWMEMLNPVENFGESIIDYQYVECTSSTI 572 (765)
Q Consensus 493 aL~aL~~l~~~~~~~~g~~~~~~~l~~av~~Lls~Qn~dGGw~~~e~~~~~~~le~l~p~e~f~~~~~d~~~~d~Ta~~l 572 (765)
+|+||..+.+.+.+ .|.++..++++++++||+++||+||||++|+.++++.|++.+||.|.|+++++|+++++||+.+|
T Consensus 460 vl~aL~~~~~~~~~-~g~~~~~~~i~~av~wLls~Q~~DGgw~a~~~~~~~~~l~~i~~~e~fg~~~~d~s~v~~Ta~vL 538 (732)
T 1w6k_A 460 ALKAVLLLQEKCPH-VTEHIPRERLCDAVAVLLNMRNPDGGFATYETKRGGHLLELLNPSEVFGDIMIDYTYVECTSAVM 538 (732)
T ss_dssp HHHHHHHHHHHCTT-CCSCCCHHHHHHHHHHHHTTCCTTSCBCSSSCCCSCGGGGGGCCCSSCSSCSSCCCBHHHHHHHH
T ss_pred HHHHHHHHhccccc-ccchhhHHHHHHHHHHHHHhcCCCCCEEeecCCCchHHHhhCcchhcccccccCCCcchHHHHHH
Confidence 99999988654321 25567889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCcCCccchhHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCchhHHHHHHHHHHHcCCCCCCh---HHHHHHHHH
Q 043885 573 QCLKSFTKHYPKHRRREIEEFIAKGANFIESIQRPDGWWYGSWGVCFTYGTWFGIKGLVDSGRKYENS---RSIRKACDF 649 (765)
Q Consensus 573 ~aL~~~~~~~p~~r~~~i~~~I~rAv~~L~~~Q~~DGsW~g~wg~~~~YgT~~al~aL~aaG~~~~~~---~~i~rav~~ 649 (765)
++|..+++.+|+++.++++++|+||++||++.|++||||++.||+|++|+|++++.||.++|..+.++ +.++||++|
T Consensus 539 ~aL~~~~~~~~~~~~~~~~~~i~rAv~yL~~~Q~~DGsW~g~wg~~~~Y~T~~al~AL~~aG~~~~~~~~~~~i~rav~~ 618 (732)
T 1w6k_A 539 QALKYFHKRFPEHRAAEIRETLTQGLEFCRRQQRADGSWEGSWGVCFTYGTWFGLEAFACMGQTYRDGTACAEVSRACDF 618 (732)
T ss_dssp HHHHHHHHHCTTSSHHHHHHHHHHHHHHHHHHSCTTSCCCCSSBSSHHHHHHHHHHHHHHTTCCCBTTBCCHHHHHHHHH
T ss_pred HHHHHhccccccccchhhHHHHHHHHHHHHhhcCCCCCccCcCCCccchHHHHHHHHHHHhCCcccccchhHHHHHHHHH
Confidence 99999987678887777889999999999999999999999999999999999999999999875444 899999999
Q ss_pred HHhcccCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHhcCcCCCCCCCCcccc
Q 043885 650 LLSKQLDSGGWGESYVSCVDRVYTNLEGNKAHNVNTAWAMLALIEAGQAHRDPTPLHRAARVLINSQMENGDFPQQEIMG 729 (765)
Q Consensus 650 Lls~Q~~DGGWGes~~s~~~~~Y~~l~g~~S~~~~TAwALlAL~~aG~~~~d~~~i~rav~~L~~~Q~~dG~w~~~~~~g 729 (765)
|+++|++||||++++.||.++.|.+ ++.|++++|||||+||+.+|+. +.++++|+++||+++|+++|+|+++.++|
T Consensus 619 Lls~Q~~DGGWge~~~s~~~~~y~~--~~~s~v~~TAwALlALl~ag~~--~~~~i~r~v~wL~~~Q~~~Ggf~~~~~~g 694 (732)
T 1w6k_A 619 LLSRQMADGGWGEDFESCEERRYVQ--SAQSQIHNTCWAMMGLMAVRHP--DIEAQERGVRCLLEKQLPNGDWPQENIAG 694 (732)
T ss_dssp HHTTCCTTSCCCBCTHHHHHTSCCB--CSSCCHHHHHHHHHHHHHTTCS--CHHHHHHHHHHHHHHCCTTSCCCCCSCCE
T ss_pred HHHhcccCCCCCCCCccccccccCC--CCCCCHHHHHHHHHHHHHcCCC--ChHHHHHHHHHHHHhcCCCCCccCCcccc
Confidence 9999999999999999999889986 6789999999999999999875 45689999999999999999999999999
Q ss_pred ccCCccccccCCccchHHHHHHHHHHHhccCC
Q 043885 730 SFTRNCMISYSAWRNIFPIWALGAFYNRVLLP 761 (765)
Q Consensus 730 ~f~~~~~~~Y~~Yr~~fpl~ALg~y~~~~~~~ 761 (765)
+||++|||+|++|+++|||+||++|++++...
T Consensus 695 ~f~~~~~i~Y~~y~~~fpl~AL~~y~~~~~~~ 726 (732)
T 1w6k_A 695 VFNKSCAISYTSYRNIFPIWALGRFSQLYPER 726 (732)
T ss_dssp EETTTEEECCTTHHHHHHHHHHHHHHHHCTTS
T ss_pred cccchhhhcccchhHHHHHHHHHHHHHhcchh
Confidence 99999999999999999999999999987543
No 2
>2sqc_A Squalene-hopene cyclase; isomerase, triterpene cyclase, monotopic membrane protein, QW-sequence, repeat; HET: C8E; 2.00A {Alicyclobacillus acidocaldarius} SCOP: a.102.4.2 a.102.4.2 PDB: 3sqc_A 1ump_A* 1h35_A* 1h36_A* 1h37_A* 1h39_A* 1h3a_A* 1h3b_A* 1h3c_A* 1o6h_A* 1o6q_A* 1gsz_A* 1o79_A* 1sqc_A* 1o6r_A*
Probab=100.00 E-value=6e-132 Score=1165.95 Aligned_cols=616 Identities=22% Similarity=0.349 Sum_probs=557.7
Q ss_pred cHHHHHHHHHHHHHHHHhcCCCCCCccccCCCCCcchHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhccCCCCcccccc
Q 043885 94 NEEAVNTTLRRALRFYSTLQSEDGFWPGDYAGPLFLLPCLVIGLYITGDLNTILQVEYRREMLRYLYNHQNEDGGWGLHI 173 (765)
Q Consensus 94 ~~e~~~~al~~a~~~l~~~Q~~DG~W~~~~~g~~~~~~~~vial~~~g~~~~~~~~~~~~~~~ryl~~~Qn~DGGWgl~~ 173 (765)
++|+++++|+++++||+++|.+||||++|++||+|++|++||++|++|..+ ++++++++|||++|||+|||||+|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~q~~dG~w~~~~~~~~~~~~~~v~~~~~~~~~~----~~~~~~~~~yl~~~Q~~dGgW~~~~ 82 (631)
T 2sqc_A 7 EAPAYARTLDRAVEYLLSCQKDEGYWWGPLLSNVTMEAEYVLLCHILDRVD----RDRMEKIRRYLLHEQREDGTWALYP 82 (631)
T ss_dssp -CCHHHHHHHHHHHHHHHHCCTTSCCCCCEECCTHHHHHHHHHHHHTTCCC----HHHHHHHHHHHHHHSCTTSCCCSST
T ss_pred chHHHHHHHHHHHHHHHHhcCCCCcccccCCCcchhhHHHHHHHHHhCCCC----HHHHHHHHHHHHHhcCCCCCccCCC
Confidence 456899999999999999999999999999999999999999999999665 4899999999999999999999999
Q ss_pred CCCcchhhhHHHHHHHHHcCCCCCCCchHHHHHHHHHHhcCCCCCCchhHHHHHHHhccccCCCCCCCCcchhccCCCCC
Q 043885 174 EGESTMLNTVLSYVGLRLLGERMDGGDGAIEKARKWILGRGGATYIPSWGKIWLSVLGVYDWSGNNPIPPETWLLPDFLP 253 (765)
Q Consensus 174 ~~~s~m~~Tv~~Y~aLrllG~~~~~~~~~~~rAr~~Il~~GGa~~~~~w~k~~Lal~G~~~W~~~~~lPpEl~llP~~~P 253 (765)
+++|+||+||+||+||||+|+++++ |+|+|||+||++|||++++|+|||||||++|+|+|+++|+||||+||||+|+|
T Consensus 83 ~~~~~~~~t~~~y~aLrllg~~~~~--~~~~~ar~~i~~~GG~~~~~~~~k~~La~~G~~~w~~~~~~p~e~~llp~~~p 160 (631)
T 2sqc_A 83 GGPPDLDTTIEAYVALKYIGMSRDE--EPMQKALRFIQSQGGIESSRVFTRMWLALVGEYPWEKVPMVPPEIMFLGKRMP 160 (631)
T ss_dssp TCCCCHHHHHHHHHHHHHHTCCTTS--HHHHHHHHHHHHTTCGGGSCHHHHHHHHHTTSSCGGGSCCCCGGGGGSCTTST
T ss_pred CCCcchHHHHHHHHHHHhcCCCCCh--HHHHHHHHHHHHcCCcccCCHHHHHHHHHcCCCCcccCCCCCHHHHHcccccc
Confidence 9999999999999999999999998 99999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccccchhhhHHHHhccccccccCchhhhhhhhhccCCCCccchhhhhhhccccccCCCCchhHHHHHHHHHHH
Q 043885 254 THPGRMWCHTRLVLLPTSYLYGKRFVGKINSLVLCLREELYTRPYEKIDWNRARFLCAQEDLYRQHPMFQDMLWNFSHKV 333 (765)
Q Consensus 254 ~~~~~~~~~~R~v~~pmsyl~~~r~~~~~~p~~~~lr~EL~~~p~~~i~w~~~R~~~a~~d~~~p~~~~~~~~~~~l~~~ 333 (765)
|||++||||||+||+||+|||+|||++|+++++ +| +|||++||+.|+|.. +.|++.+...+...+ ++
T Consensus 161 ~~~~~~~~~~R~~~~P~~~l~~~r~~~~~~~~~-~l-~el~~~~~~~~~~~~----------~~~~~~~~~~~~~~l-~~ 227 (631)
T 2sqc_A 161 LNIYEFGSWARATVVALSIVMSRQPVFPLPERA-RV-PELYETDVPPRRRGA----------KGGGGWIFDALDRAL-HG 227 (631)
T ss_dssp TCGGGSCHHHHHHHHHHHHHHHHCCCCCCCGGG-CC-GGGGCCSSCCCCCCC----------TTCCCHHHHHHHHHH-HH
T ss_pred cCHhHhHHHHHHHHHhHHHHhhCCCccCCCCCC-CH-HHhcCCCccccCccc----------cccHHHHHHHHHHHH-HH
Confidence 999999999999999999999999999988886 78 999999999999963 345655444333322 22
Q ss_pred hhhhhccCCCHHHHHHHHHHHHHhhhhcCCCccce---eechHHHHHHHhhccccCCCcHHHHHHHHHHhhhheeccC-C
Q 043885 334 AEPLLKKWPFSKIRQIALDTVMKHIHCEDENTQYI---CIAGVNKVLNMLCRWVEDPNSEAYKHHLARIKDYLWVAED-G 409 (765)
Q Consensus 334 ~e~~~~~~p~~~lr~~Al~~~~~~i~~ede~t~y~---~i~~v~~~l~ml~~~~~~p~~~~~~~~l~~l~~~l~~~~d-G 409 (765)
+ .++|+++||++|++++++||++++++++++ +.++++++++|++++.+ +||.+++|+++|.+|+|..+| |
T Consensus 228 ~----~~~~~~~lr~~a~~~~~~~i~~~~~~~g~~~~i~p~~~~~~~~l~~~g~~--~~~~~~~~~~~~~~~~~~~~dGg 301 (631)
T 2sqc_A 228 Y----QKLSVHPFRRAAEIRALDWLLERQAGDGSWGGIQPPWFYALIALKILDMT--QHPAFIKGWEGLELYGVELDYGG 301 (631)
T ss_dssp H----HHSSCCTTHHHHHHHHHHHHHHHCCTTSSSTTSHHHHHHHHHHHHHTTCT--TSHHHHHHHHGGGGGEEECTTSC
T ss_pred h----hcCCcHHHHHHHHHHHHHHHHHHHcCCCCcccccHHHHHHHHHHHHcCCC--CCHHHHHHHHHHHhceEEcCCCc
Confidence 3 345777899999999999999999999874 44558888888887644 999999999999999999999 8
Q ss_pred ceeeccCCCchhHHHHHHHHHHHcCCCCcchHHHHHHHHHHHhhccccCCCCCCccccCCCCCCCCCCCCCCCCCCChhh
Q 043885 410 MKMQAYNGSQLWDTAFAVHAILSTNLVDEYGSMLKKANNYIKTTQVRTKSFEDPSCWYRHEFQEGWPFSSLDNGWIATDT 489 (765)
Q Consensus 410 ~~~q~~~gs~~WDTalai~AL~~ag~~~~~~~~l~kA~~~L~~~Q~~~~~~Gd~~~~~~~~~~GgW~fs~~~~~~pd~D~ 489 (765)
+++|++ +||+|||+++++||.++|++++ ++.++||++||++.|+. .+|||..++++.++|||+|++.|++||++||
T Consensus 302 ~~~~~~-~s~vwdta~~l~AL~~~G~~~~-~~~~~ka~~~L~~~q~~--~~g~~~~~~~~~s~GgW~f~~~~~~~p~v~d 377 (631)
T 2sqc_A 302 WMFQAS-ISPVWDTGLAVLALRAAGLPAD-HDRLVKAGEWLLDRQIT--VPGDWAVKRPNLKPGGFAFQFDNVYYPDVCD 377 (631)
T ss_dssp EEECSS-CCHHHHHHHHHHHHHHTTCCTT-CHHHHHHHHHHHHTCCC--SCCGGGGTCTTSCCCCBCSSSSCTTCCBHHH
T ss_pred eeeCCC-CChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHHhcCC--CCCChhhhcCCCCCCCCccccCCCCCCchHH
Confidence 999999 7999999999999999999865 89999999999999995 3599999999999999999999999999999
Q ss_pred hHHHHHHHHHhccccccccCCCCChHHHHHHHHHHHhccccCCCccccccCCCcchhhcccccccccc--ccccCCccCc
Q 043885 490 TAEGLNVSVLLSEMSYDLVGEAIPLNRLFEAVNVVLSLQNSSGGVASYERTRSYAWMEMLNPVENFGE--SIIDYQYVEC 567 (765)
Q Consensus 490 TA~aL~aL~~l~~~~~~~~g~~~~~~~l~~av~~Lls~Qn~dGGw~~~e~~~~~~~le~l~p~e~f~~--~~~d~~~~d~ 567 (765)
||++++||..+.. +. .++..+.+.++++||+++|++||||+.|+.+++..+++.++ |.+ .++|+++++|
T Consensus 378 TA~al~AL~~~~~-~~----~~~~~~~l~~a~~wLls~Q~~dGgf~~~~~~~~~~~~~~~~----F~~~~~~~d~~~vd~ 448 (631)
T 2sqc_A 378 TAVVVWALNTLRL-PD----ERRRRDAMTKGFRWIVGMQSSNGGWGAYDVDNTSDLPNHIP----FSDFGEVTDPPSEDV 448 (631)
T ss_dssp HHHHHHHHTTCCC-SC----HHHHHHHHHHHHHHHHHTCCTTSCBCSSCSSCCCSGGGGST----TCSSSCSSCCCBHHH
T ss_pred HHHHHHHHHHcCC-Cc----cchhHHHHHHHHHHHHhhcCCCCCCCccCCCCccccccccc----cccCCcccCCCCchH
Confidence 9999999987653 11 12356789999999999999999999999998888888885 544 4789999999
Q ss_pred HHHHHHHHHhccCcCCccchhHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCchhHHHHHHHHHHHcCCCCCChHHHHHHH
Q 043885 568 TSSTIQCLKSFTKHYPKHRRREIEEFIAKGANFIESIQRPDGWWYGSWGVCFTYGTWFGIKGLVDSGRKYENSRSIRKAC 647 (765)
Q Consensus 568 Ta~~l~aL~~~~~~~p~~r~~~i~~~I~rAv~~L~~~Q~~DGsW~g~wg~~~~YgT~~al~aL~aaG~~~~~~~~i~rav 647 (765)
|+.++.+|..++. +.+ ++.|+||++||++.|++||||+|.|+++++|+|++++.+|..+|.+. +++.++||+
T Consensus 449 Ta~vl~aL~~~g~--~~~-----~~~i~rai~~L~~~Q~~DGsw~g~wg~~~~y~Ta~~l~aL~~~g~~~-~~~~i~rav 520 (631)
T 2sqc_A 449 TAHVLECFGSFGY--DDA-----WKVIRRAVEYLKREQKPDGSWFGRWGVNYLYGTGAVVSALKAVGIDT-REPYIQKAL 520 (631)
T ss_dssp HHHHHHHHHTTTC--CTT-----SHHHHHHHHHHHHHCCTTSCCCCSSBSSHHHHHHHHHHHHHHTTCCT-TSHHHHHHH
T ss_pred HHHHHHHHHhcCC--Ccc-----HHHHHHHHHHHHHhcCCCCCCCCCCCCCchHHHHHHHHHHHHhCCcc-cHHHHHHHH
Confidence 9999999998864 322 36899999999999999999999999999999999999999999875 689999999
Q ss_pred HHHHhcccCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHhcCcCCCCCCCCcc
Q 043885 648 DFLLSKQLDSGGWGESYVSCVDRVYTNLEGNKAHNVNTAWAMLALIEAGQAHRDPTPLHRAARVLINSQMENGDFPQQEI 727 (765)
Q Consensus 648 ~~Lls~Q~~DGGWGes~~s~~~~~Y~~l~g~~S~~~~TAwALlAL~~aG~~~~d~~~i~rav~~L~~~Q~~dG~w~~~~~ 727 (765)
+||+++|++|||||+++.+|.++.|.+ ++.|++++|+|||+||+.+|..+ .++++|+++||+++|++||+|+++.+
T Consensus 521 ~~L~s~Q~~DGgWg~~~~sy~~~~~~~--~~~s~v~~Ta~ALlaL~~ag~~~--~~~i~rav~wL~~~Q~~dGgw~~~~~ 596 (631)
T 2sqc_A 521 DWVEQHQNPDGGWGEDCRSYEDPAYAG--KGASTPSQTAWALMALIAGGRAE--SEAARRGVQYLVETQRPDGGWDEPYY 596 (631)
T ss_dssp HHHHHTCCTTSCCCCCGGGGTCGGGTT--CSSCCHHHHHHHHHHHHHTTCSS--SHHHHHHHHHHHHHCCTTSCCCCCSC
T ss_pred HHHHHhCcCCCCcCCccccccccccCC--CCCCCHHHHHHHHHHHHHcCCCC--hHHHHHHHHHHHhccCCCCCcCCCCc
Confidence 999999999999999999998888865 67899999999999999999863 35799999999999999999999999
Q ss_pred ccc-cCCccccccCCccchHHHHHHHHHHHhcc
Q 043885 728 MGS-FTRNCMISYSAWRNIFPIWALGAFYNRVL 759 (765)
Q Consensus 728 ~g~-f~~~~~~~Y~~Yr~~fpl~ALg~y~~~~~ 759 (765)
+|+ ||++|||+|++|+++|||||||+|++++.
T Consensus 597 tg~gf~~~~yl~y~~y~~~f~l~AL~~y~~~~~ 629 (631)
T 2sqc_A 597 TGTGFPGDFYLGYTMYRHVFPTLALGRYKQAIE 629 (631)
T ss_dssp CEEEETTTEEEEETTHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccceeeccchhhHHHHHHHHHHHHHhh
Confidence 999 99999999999999999999999999874
No 3
>2sqc_A Squalene-hopene cyclase; isomerase, triterpene cyclase, monotopic membrane protein, QW-sequence, repeat; HET: C8E; 2.00A {Alicyclobacillus acidocaldarius} SCOP: a.102.4.2 a.102.4.2 PDB: 3sqc_A 1ump_A* 1h35_A* 1h36_A* 1h37_A* 1h39_A* 1h3a_A* 1h3b_A* 1h3c_A* 1o6h_A* 1o6q_A* 1gsz_A* 1o79_A* 1sqc_A* 1o6r_A*
Probab=100.00 E-value=1.8e-41 Score=398.26 Aligned_cols=506 Identities=18% Similarity=0.164 Sum_probs=337.1
Q ss_pred HHHHHHHHHHHhcCCCCCCccccCC--CCCcchHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhccCCCCccccccCCCc
Q 043885 100 TTLRRALRFYSTLQSEDGFWPGDYA--GPLFLLPCLVIGLYITGDLNTILQVEYRREMLRYLYNHQNEDGGWGLHIEGES 177 (765)
Q Consensus 100 ~al~~a~~~l~~~Q~~DG~W~~~~~--g~~~~~~~~vial~~~g~~~~~~~~~~~~~~~ryl~~~Qn~DGGWgl~~~~~s 177 (765)
+-+++.++||.++|++||+|+...+ |++|.|...+++|+++| ...+++++++++++|++ +||+. ..
T Consensus 59 ~~~~~~~~yl~~~Q~~dGgW~~~~~~~~~~~~t~~~y~aLrllg---~~~~~~~~~~ar~~i~~----~GG~~-----~~ 126 (631)
T 2sqc_A 59 DRMEKIRRYLLHEQREDGTWALYPGGPPDLDTTIEAYVALKYIG---MSRDEEPMQKALRFIQS----QGGIE-----SS 126 (631)
T ss_dssp HHHHHHHHHHHHHSCTTSCCCSSTTCCCCHHHHHHHHHHHHHHT---CCTTSHHHHHHHHHHHH----TTCGG-----GS
T ss_pred HHHHHHHHHHHHhcCCCCCccCCCCCCcchHHHHHHHHHHHhcC---CCCChHHHHHHHHHHHH----cCCcc-----cC
Confidence 4578899999999999999997554 45889999999999999 44567899999999999 59974 55
Q ss_pred chhhhHHHHHHHHHcCCCCCCCchHHHHHHHHHHhcCCCCCCchhHHHHHHHhccccCCCCCCCCcchhc-------cCC
Q 043885 178 TMLNTVLSYVGLRLLGERMDGGDGAIEKARKWILGRGGATYIPSWGKIWLSVLGVYDWSGNNPIPPETWL-------LPD 250 (765)
Q Consensus 178 ~m~~Tv~~Y~aLrllG~~~~~~~~~~~rAr~~Il~~GGa~~~~~w~k~~Lal~G~~~W~~~~~lPpEl~l-------lP~ 250 (765)
.+|+. +.|.++|+.++++.+.|+ .+-|++ |.| |.+++.+++.|.+...||..++. +|.
T Consensus 127 ~~~~k----~~La~~G~~~w~~~~~~p-~e~~ll--------p~~--~p~~~~~~~~~~R~~~~P~~~l~~~r~~~~~~~ 191 (631)
T 2sqc_A 127 RVFTR----MWLALVGEYPWEKVPMVP-PEIMFL--------GKR--MPLNIYEFGSWARATVVALSIVMSRQPVFPLPE 191 (631)
T ss_dssp CHHHH----HHHHHTTSSCGGGSCCCC-GGGGGS--------CTT--STTCGGGSCHHHHHHHHHHHHHHHHCCCCCCCG
T ss_pred CHHHH----HHHHHcCCCCcccCCCCC-HHHHHc--------ccc--cccCHhHhHHHHHHHHHhHHHHhhCCCccCCCC
Confidence 57776 799999999999766665 566666 555 44666788888887666665554 333
Q ss_pred CCCCCCCcccccccchhhhHH--------HHhccccc--cccCchhhhhhhhhccCCCCccchhhhhhhccccccCCCCc
Q 043885 251 FLPTHPGRMWCHTRLVLLPTS--------YLYGKRFV--GKINSLVLCLREELYTRPYEKIDWNRARFLCAQEDLYRQHP 320 (765)
Q Consensus 251 ~~P~~~~~~~~~~R~v~~pms--------yl~~~r~~--~~~~p~~~~lr~EL~~~p~~~i~w~~~R~~~a~~d~~~p~~ 320 (765)
.+ +..++++..+..+.++. ....+.+. .+.+| ..||+.-.. ..++|...|.+ .|.+.-.
T Consensus 192 ~~--~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~lr~~a~~---~~~~~i~~~~~---~~g~~~~- 260 (631)
T 2sqc_A 192 RA--RVPELYETDVPPRRRGAKGGGGWIFDALDRALHGYQKLSV--HPFRRAAEI---RALDWLLERQA---GDGSWGG- 260 (631)
T ss_dssp GG--CCGGGGCCSSCCCCCCCTTCCCHHHHHHHHHHHHHHHSSC--CTTHHHHHH---HHHHHHHHHCC---TTSSSTT-
T ss_pred CC--CHHHhcCCCccccCccccccHHHHHHHHHHHHHHhhcCCc--HHHHHHHHH---HHHHHHHHHHc---CCCCccc-
Confidence 22 33444444443333221 00000000 00001 123332111 22457766654 2222110
Q ss_pred hhHHHHHHHHHHHhhhhhccCCCHHHHHHHHHHHHHhhhhcCCCccce--eechHHH-HH--HHhhccccCCCcHHHHHH
Q 043885 321 MFQDMLWNFSHKVAEPLLKKWPFSKIRQIALDTVMKHIHCEDENTQYI--CIAGVNK-VL--NMLCRWVEDPNSEAYKHH 395 (765)
Q Consensus 321 ~~~~~~~~~l~~~~e~~~~~~p~~~lr~~Al~~~~~~i~~ede~t~y~--~i~~v~~-~l--~ml~~~~~~p~~~~~~~~ 395 (765)
.....++..+.... ...|-++..+++++.+.+++-.+++++.++ |..||+. ++ .+|...+..+++|.++++
T Consensus 261 i~p~~~~~~~~l~~----~g~~~~~~~~~~~~~~~~~~~~~~dGg~~~~~~~s~vwdta~~l~AL~~~G~~~~~~~~~ka 336 (631)
T 2sqc_A 261 IQPPWFYALIALKI----LDMTQHPAFIKGWEGLELYGVELDYGGWMFQASISPVWDTGLAVLALRAAGLPADHDRLVKA 336 (631)
T ss_dssp SHHHHHHHHHHHHH----TTCTTSHHHHHHHHGGGGGEEECTTSCEEECSSCCHHHHHHHHHHHHHHTTCCTTCHHHHHH
T ss_pred ccHHHHHHHHHHHH----cCCCCCHHHHHHHHHHHhceEEcCCCceeeCCCCChHHHHHHHHHHHHHcCCCCCCHHHHHH
Confidence 00012222221111 233433578888888888764333324332 3345654 22 233334555678999999
Q ss_pred HHHHhhhheeccCC------------ceeeccCC--CchhHHHHHHHHHHHcCCCC--cchHHHHHHHHHHHhhccccCC
Q 043885 396 LARIKDYLWVAEDG------------MKMQAYNG--SQLWDTAFAVHAILSTNLVD--EYGSMLKKANNYIKTTQVRTKS 459 (765)
Q Consensus 396 l~~l~~~l~~~~dG------------~~~q~~~g--s~~WDTalai~AL~~ag~~~--~~~~~l~kA~~~L~~~Q~~~~~ 459 (765)
++.|.+......++ +.++..|. +.+||||++++||.+++.++ ...+.+++|++||++.|..+
T Consensus 337 ~~~L~~~q~~~~g~~~~~~~~~s~GgW~f~~~~~~~p~v~dTA~al~AL~~~~~~~~~~~~~~l~~a~~wLls~Q~~d-- 414 (631)
T 2sqc_A 337 GEWLLDRQITVPGDWAVKRPNLKPGGFAFQFDNVYYPDVCDTAVVVWALNTLRLPDERRRRDAMTKGFRWIVGMQSSN-- 414 (631)
T ss_dssp HHHHHHTCCCSCCGGGGTCTTSCCCCBCSSSSCTTCCBHHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHTCCTT--
T ss_pred HHHHHHhcCCCCCChhhhcCCCCCCCCccccCCCCCCchHHHHHHHHHHHHcCCCccchhHHHHHHHHHHHHhhcCCC--
Confidence 99998876532111 11222111 56999999999999999753 13678999999999999875
Q ss_pred CCCCccccCC---CCCCCCCCCCCCCC--CCChhhhHHHHHHHHHhccccccccCCCCChHHHHHHHHHHHhccccCCCc
Q 043885 460 FEDPSCWYRH---EFQEGWPFSSLDNG--WIATDTTAEGLNVSVLLSEMSYDLVGEAIPLNRLFEAVNVVLSLQNSSGGV 534 (765)
Q Consensus 460 ~Gd~~~~~~~---~~~GgW~fs~~~~~--~pd~D~TA~aL~aL~~l~~~~~~~~g~~~~~~~l~~av~~Lls~Qn~dGGw 534 (765)
|+|..+... ...++|+|++.+.. .|++||||.+|+||..+. .+...+.+++|++||+++|++||||
T Consensus 415 -Ggf~~~~~~~~~~~~~~~~F~~~~~~~d~~~vd~Ta~vl~aL~~~g--------~~~~~~~i~rai~~L~~~Q~~DGsw 485 (631)
T 2sqc_A 415 -GGWGAYDVDNTSDLPNHIPFSDFGEVTDPPSEDVTAHVLECFGSFG--------YDDAWKVIRRAVEYLKREQKPDGSW 485 (631)
T ss_dssp -SCBCSSCSSCCCSGGGGSTTCSSSCSSCCCBHHHHHHHHHHHHTTT--------CCTTSHHHHHHHHHHHHHCCTTSCC
T ss_pred -CCCCccCCCCccccccccccccCCcccCCCCchHHHHHHHHHHhcC--------CCccHHHHHHHHHHHHHhcCCCCCC
Confidence 788654221 22467888764333 389999999999998763 2345689999999999999999999
Q ss_pred c-ccccCCCcchhhccccccccccccccCCccCcHHHHHHHHHhccCcCCccchhHHHHHHHHHHHHHHHhcCCCCCCCC
Q 043885 535 A-SYERTRSYAWMEMLNPVENFGESIIDYQYVECTSSTIQCLKSFTKHYPKHRRREIEEFIAKGANFIESIQRPDGWWYG 613 (765)
Q Consensus 535 ~-~~e~~~~~~~le~l~p~e~f~~~~~d~~~~d~Ta~~l~aL~~~~~~~p~~r~~~i~~~I~rAv~~L~~~Q~~DGsW~g 613 (765)
. .|. ..++.+|+.++.+|..++.. + ..+.|+||++||++.|++||+|..
T Consensus 486 ~g~wg-----------------------~~~~y~Ta~~l~aL~~~g~~-~------~~~~i~rav~~L~s~Q~~DGgWg~ 535 (631)
T 2sqc_A 486 FGRWG-----------------------VNYLYGTGAVVSALKAVGID-T------REPYIQKALDWVEQHQNPDGGWGE 535 (631)
T ss_dssp CCSSB-----------------------SSHHHHHHHHHHHHHHTTCC-T------TSHHHHHHHHHHHHTCCTTSCCCC
T ss_pred CCCCC-----------------------CCchHHHHHHHHHHHHhCCc-c------cHHHHHHHHHHHHHhCcCCCCcCC
Confidence 3 221 11345899999999988653 1 236899999999999999999942
Q ss_pred -----------CCCCCchhHHHHHHHHHHHcCCCCCChHHHHHHHHHHHhcccCCCccccccccc---cccccccCCCCC
Q 043885 614 -----------SWGVCFTYGTWFGIKGLVDSGRKYENSRSIRKACDFLLSKQLDSGGWGESYVSC---VDRVYTNLEGNK 679 (765)
Q Consensus 614 -----------~wg~~~~YgT~~al~aL~aaG~~~~~~~~i~rav~~Lls~Q~~DGGWGes~~s~---~~~~Y~~l~g~~ 679 (765)
.++.+.++.|+++|.||..+|.. +.+.++|+++||+++|++||||++...+. ...-|. .
T Consensus 536 ~~~sy~~~~~~~~~~s~v~~Ta~ALlaL~~ag~~--~~~~i~rav~wL~~~Q~~dGgw~~~~~tg~gf~~~~yl-----~ 608 (631)
T 2sqc_A 536 DCRSYEDPAYAGKGASTPSQTAWALMALIAGGRA--ESEAARRGVQYLVETQRPDGGWDEPYYTGTGFPGDFYL-----G 608 (631)
T ss_dssp CGGGGTCGGGTTCSSCCHHHHHHHHHHHHHTTCS--SSHHHHHHHHHHHHHCCTTSCCCCCSCCEEEETTTEEE-----E
T ss_pred ccccccccccCCCCCCCHHHHHHHHHHHHHcCCC--ChHHHHHHHHHHHhccCCCCCcCCCCccccccccccee-----e
Confidence 34567788899999999999987 46889999999999999999999875421 111121 1
Q ss_pred CcHHHHHHHHHHHHHh
Q 043885 680 AHNVNTAWAMLALIEA 695 (765)
Q Consensus 680 S~~~~TAwALlAL~~a 695 (765)
-+.+.+.++|.||...
T Consensus 609 y~~y~~~f~l~AL~~y 624 (631)
T 2sqc_A 609 YTMYRHVFPTLALGRY 624 (631)
T ss_dssp ETTHHHHHHHHHHHHH
T ss_pred ccchhhHHHHHHHHHH
Confidence 2357899999999765
No 4
>1w6k_A Lanosterol synthase; cyclase, cholesterol, monotopic membrane protein, B-octyl-glucoside, isomerase, steroid biosynthesis; HET: BOG LAN; 2.1A {Homo sapiens} SCOP: a.102.4.2 a.102.4.2 PDB: 1w6j_A*
Probab=99.97 E-value=1.7e-29 Score=300.24 Aligned_cols=517 Identities=13% Similarity=0.060 Sum_probs=304.0
Q ss_pred HHHHHHHHHHhcCCCCCCccc--cCCCCCcchHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhccCCCCccccccCCCcc
Q 043885 101 TLRRALRFYSTLQSEDGFWPG--DYAGPLFLLPCLVIGLYITGDLNTILQVEYRREMLRYLYNHQNEDGGWGLHIEGEST 178 (765)
Q Consensus 101 al~~a~~~l~~~Q~~DG~W~~--~~~g~~~~~~~~vial~~~g~~~~~~~~~~~~~~~ryl~~~Qn~DGGWgl~~~~~s~ 178 (765)
-+++.++||.++|++||+|+- +-.+.+|.|...++||+++| ...+++++++++++|++| || -....
T Consensus 123 ~~~~~~~yl~~~Q~~DGgWgl~~~~~s~~~~T~~~Y~aLrl~G---~~~~~~~~~~ar~~i~~~----GG-----~~~~~ 190 (732)
T 1w6k_A 123 YREEIVRYLRSVQLPDGGWGLHIEDKSTVFGTALNYVSLRILG---VGPDDPDLVRARNILHKK----GG-----AVAIP 190 (732)
T ss_dssp HHHHHHHHHHHHSCTTSCBCSBTTSCCBHHHHHHHHHHHHHTT---CCTTSHHHHHHHHHHHHT----TC-----GGGCC
T ss_pred HHHHHHHHHHHhcCCCCCccCCcCCCccHHHHHHHHHHHHHcC---CCCCcHHHHHHHHHHHHc----CC-----cccCc
Confidence 467899999999999999995 44678888999999999999 345688999999999996 87 34566
Q ss_pred hhhhHHHHHHHHHcCCCCCCCchHHHHHHHHHHhcCCCCCCchh-----------HH---HHHHHhccccCCCCCC-CC-
Q 043885 179 MLNTVLSYVGLRLLGERMDGGDGAIEKARKWILGRGGATYIPSW-----------GK---IWLSVLGVYDWSGNNP-IP- 242 (765)
Q Consensus 179 m~~Tv~~Y~aLrllG~~~~~~~~~~~rAr~~Il~~GGa~~~~~w-----------~k---~~Lal~G~~~W~~~~~-lP- 242 (765)
+||. +-|.++|+.++++.+.|+ .+-|++ |.| .| +-|+++----+ +.+ .|
T Consensus 191 ~~~k----~~La~~g~~~W~~~~~~P-pE~~ll--------P~~~p~~~~~~~~~~R~~~~p~~~l~~~r~--~~~~~~~ 255 (732)
T 1w6k_A 191 SWGK----FWLAVLNVYSWEGLNTLF-PEMWLF--------PDWAPAHPSTLWCHCRQVYLPMSYCYAVRL--SAAEDPL 255 (732)
T ss_dssp HHHH----HHHHHTTSSCGGGSCCCC-GGGGGS--------CTTSTTCGGGSCHHHHHHHHHHHHHHHTTC--CCCCCHH
T ss_pred HHHH----HHHHHcCCCCcccCCCCC-HHHHHc--------cCcCCCCHHHHHHHHHHHHHhHHHHhhcCC--CCCCCcc
Confidence 8888 689999999999776665 222323 544 33 11222111111 222 33
Q ss_pred -----cchhccCC-CCCCCCCcccccccchhhhH--HHHhcc---ccccccCchhhhhhhhhccCCCCccchhhhhhhcc
Q 043885 243 -----PETWLLPD-FLPTHPGRMWCHTRLVLLPT--SYLYGK---RFVGKINSLVLCLREELYTRPYEKIDWNRARFLCA 311 (765)
Q Consensus 243 -----pEl~llP~-~~P~~~~~~~~~~R~v~~pm--syl~~~---r~~~~~~p~~~~lr~EL~~~p~~~i~w~~~R~~~a 311 (765)
.||..-|. -+.....+-.|-....|.|- .+.... ++..++. ...||+.... ..++|...+.+
T Consensus 256 ~~~lr~el~~~~~~~~~~~~~r~~~~~~d~~~p~~~~~~~~~~~l~~~e~~~--~~~lr~~a~~---~~~~~i~~~~~-- 328 (732)
T 1w6k_A 256 VQSLRQELYVEDFASIDWLAQRNNVAPDELYTPHSWLLRVVYALLNLYEHHH--SAHLRQRAVQ---KLYEHIVADDR-- 328 (732)
T ss_dssp HHHHHTTSCSSCGGGCCSGGGTTCCCGGGCSSCCCHHHHHHHHHHHHHHHTC--CHHHHHHHHH---HHHHHHHHHHH--
T ss_pred hhhHHHHhcCCCccccchhhhccccccccccCCHHHHHHHHHHHHHHhhhcC--cHHHHHHHHH---HHHHHHHhhcc--
Confidence 34433331 11111001001000111110 000000 1111111 1234443321 22356666654
Q ss_pred ccccCCCCchhHHHHHHHHHHHhhhhhccCCCHHHHHHHHHHHHHhhhhcCCCccce--ee-chHHH-HHHHhhc--ccc
Q 043885 312 QEDLYRQHPMFQDMLWNFSHKVAEPLLKKWPFSKIRQIALDTVMKHIHCEDENTQYI--CI-AGVNK-VLNMLCR--WVE 385 (765)
Q Consensus 312 ~~d~~~p~~~~~~~~~~~l~~~~e~~~~~~p~~~lr~~Al~~~~~~i~~ede~t~y~--~i-~~v~~-~l~ml~~--~~~ 385 (765)
.+.|---.++..++. .+..+.+ .. |-+...+++++.+.+++.. .+.+.++ +. .+|+. ++.+.++ .+.
T Consensus 329 -~~~~~~i~pv~~~l~-~l~~~~~---~G-~~~~~~~~~l~~l~~~l~~-~~dG~~~q~~~gs~vwdTalal~AL~~ag~ 401 (732)
T 1w6k_A 329 -FTKSISIGPISKTIN-MLVRWYV---DG-PASTAFQEHVSRIPDYLWM-GLDGMKMQGTNGSQIWDTAFAIQALLEAGG 401 (732)
T ss_dssp -HHTTCCSSHHHHHHH-HHHHHHH---HC-TTSHHHHHHHHTSGGGEEE-ETTEEEECSSSCCHHHHHHHHHHHHHHTTG
T ss_pred -CCCCcccchhHHHHH-HHHHHHh---cC-CCCHHHHHHHHHHHHhhee-CCCCceeCCCCCCchHHHHHHHHHHHHcCC
Confidence 222322122222221 1111111 11 4345778898888887643 2333332 12 44554 3333332 222
Q ss_pred CC---CcHHHHHHHHHHhhhheec--cC----------C-ceeeccC--CCchhHHHHHHHHHHHcCC-----C-CcchH
Q 043885 386 DP---NSEAYKHHLARIKDYLWVA--ED----------G-MKMQAYN--GSQLWDTAFAVHAILSTNL-----V-DEYGS 441 (765)
Q Consensus 386 ~p---~~~~~~~~l~~l~~~l~~~--~d----------G-~~~q~~~--gs~~WDTalai~AL~~ag~-----~-~~~~~ 441 (765)
.. .++.++++++.|.+..... .| | +.....+ .+.+++||++++||..++. . ....+
T Consensus 402 ~~~~~~~~~l~ka~~~L~~~Q~~~~~~d~~~~~r~~~~GGW~f~~~~~~~pd~d~TA~vl~aL~~~~~~~~~~g~~~~~~ 481 (732)
T 1w6k_A 402 HHRPEFSSCLQKAHEFLRLSQVPDNPPDYQKYYRQMRKGGFSFSTLDCGWIVSDCTAEALKAVLLLQEKCPHVTEHIPRE 481 (732)
T ss_dssp GGCGGGHHHHHHHHHHHHHHSCCCCCTTGGGGTCCCCTTCCBSSCTTTCCBCHHHHHHHHHHHHHHHHHCTTCCSCCCHH
T ss_pred CcchhhHHHHHHHHHHHHHhcccccCCcccccccCCCCCeecCCCCCCCCCccccHHHHHHHHHHHhcccccccchhhHH
Confidence 22 2567788888876654322 11 4 3333222 1478999999999987621 1 22367
Q ss_pred HHHHHHHHHHhhccccCCCCCCccccCCCCCCCC----C----CCCCCCCCCChhhhHHHHHHHHHhccccccccCCCCC
Q 043885 442 MLKKANNYIKTTQVRTKSFEDPSCWYRHEFQEGW----P----FSSLDNGWIATDTTAEGLNVSVLLSEMSYDLVGEAIP 513 (765)
Q Consensus 442 ~l~kA~~~L~~~Q~~~~~~Gd~~~~~~~~~~GgW----~----fs~~~~~~pd~D~TA~aL~aL~~l~~~~~~~~g~~~~ 513 (765)
.+++|++||++.|..+ |+|..+.++.. ..| + |.......+.+++|+.+|.||..+...-+. ...+..
T Consensus 482 ~i~~av~wLls~Q~~D---Ggw~a~~~~~~-~~~l~~i~~~e~fg~~~~d~s~v~~Ta~vL~aL~~~~~~~~~-~~~~~~ 556 (732)
T 1w6k_A 482 RLCDAVAVLLNMRNPD---GGFATYETKRG-GHLLELLNPSEVFGDIMIDYTYVECTSAVMQALKYFHKRFPE-HRAAEI 556 (732)
T ss_dssp HHHHHHHHHHTTCCTT---SCBCSSSCCCS-CGGGGGGCCCSSCSSCSSCCCBHHHHHHHHHHHHHHHHHCTT-SSHHHH
T ss_pred HHHHHHHHHHHhcCCC---CCEEeecCCCc-hHHHhhCcchhcccccccCCCcchHHHHHHHHHHHhcccccc-ccchhh
Confidence 8999999999999876 88865432211 111 0 111111235789999999999887532110 000123
Q ss_pred hHHHHHHHHHHHhccccCCCccccccCCCcchhhccccccccccccccCCccCcHHHHHHHHHhccCcCCccchhHHHHH
Q 043885 514 LNRLFEAVNVVLSLQNSSGGVASYERTRSYAWMEMLNPVENFGESIIDYQYVECTSSTIQCLKSFTKHYPKHRRREIEEF 593 (765)
Q Consensus 514 ~~~l~~av~~Lls~Qn~dGGw~~~e~~~~~~~le~l~p~e~f~~~~~d~~~~d~Ta~~l~aL~~~~~~~p~~r~~~i~~~ 593 (765)
.+.+++|++||++.|++||||..--.. . +...|+.++.||...+..+... .+.+.
T Consensus 557 ~~~i~rAv~yL~~~Q~~DGsW~g~wg~--------------------~--~~Y~T~~al~AL~~aG~~~~~~---~~~~~ 611 (732)
T 1w6k_A 557 RETLTQGLEFCRRQQRADGSWEGSWGV--------------------C--FTYGTWFGLEAFACMGQTYRDG---TACAE 611 (732)
T ss_dssp HHHHHHHHHHHHHHSCTTSCCCCSSBS--------------------S--HHHHHHHHHHHHHHTTCCCBTT---BCCHH
T ss_pred HHHHHHHHHHHHhhcCCCCCccCcCCC--------------------c--cchHHHHHHHHHHHhCCccccc---chhHH
Confidence 578999999999999999999631000 0 1225889999999887642211 12267
Q ss_pred HHHHHHHHHHhcCCCCCCCCCC-----------CCCchhHHHHHHHHHHHcCCCCCChHHHHHHHHHHHhcccCCCcccc
Q 043885 594 IAKGANFIESIQRPDGWWYGSW-----------GVCFTYGTWFGIKGLVDSGRKYENSRSIRKACDFLLSKQLDSGGWGE 662 (765)
Q Consensus 594 I~rAv~~L~~~Q~~DGsW~g~w-----------g~~~~YgT~~al~aL~aaG~~~~~~~~i~rav~~Lls~Q~~DGGWGe 662 (765)
|+||++||++.|++||+|.... +......|++|+.+|..+|.. +.+.++|+++||+++|++||||.+
T Consensus 612 i~rav~~Lls~Q~~DGGWge~~~s~~~~~y~~~~~s~v~~TAwALlALl~ag~~--~~~~i~r~v~wL~~~Q~~~Ggf~~ 689 (732)
T 1w6k_A 612 VSRACDFLLSRQMADGGWGEDFESCEERRYVQSAQSQIHNTCWAMMGLMAVRHP--DIEAQERGVRCLLEKQLPNGDWPQ 689 (732)
T ss_dssp HHHHHHHHHTTCCTTSCCCBCTHHHHHTSCCBCSSCCHHHHHHHHHHHHHTTCS--CHHHHHHHHHHHHHHCCTTSCCCC
T ss_pred HHHHHHHHHHhcccCCCCCCCCccccccccCCCCCCCHHHHHHHHHHHHHcCCC--ChHHHHHHHHHHHHhcCCCCCccC
Confidence 9999999999999999996431 123466799999999999875 578999999999999999999986
Q ss_pred ccccc--cccccccCCCCCCcHHHHHHHHHHHHHh
Q 043885 663 SYVSC--VDRVYTNLEGNKAHNVNTAWAMLALIEA 695 (765)
Q Consensus 663 s~~s~--~~~~Y~~l~g~~S~~~~TAwALlAL~~a 695 (765)
..... ...-|. .-+.....++|.||...
T Consensus 690 ~~~~g~f~~~~~i-----~Y~~y~~~fpl~AL~~y 719 (732)
T 1w6k_A 690 ENIAGVFNKSCAI-----SYTSYRNIFPIWALGRF 719 (732)
T ss_dssp CSCCEEETTTEEE-----CCTTHHHHHHHHHHHHH
T ss_pred Ccccccccchhhh-----cccchhHHHHHHHHHHH
Confidence 43210 000111 11346788899988764
No 5
>2h6f_B Protein farnesyltransferase beta subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.102.4.3 PDB: 1jcq_B* 1ld7_B* 1mzc_B* 1s63_B* 1sa4_B* 1tn6_B* 2f0y_B* 1ld8_B* 2iej_B* 3e37_B* 2h6h_B* 2h6g_B* 2h6i_B* 1o1t_B* 1o1s_B* 1o1r_B* 3eu5_B* 3pz4_B* 3e33_B* 1d8e_B* ...
Probab=99.95 E-value=9.4e-28 Score=268.55 Aligned_cols=223 Identities=17% Similarity=0.169 Sum_probs=172.7
Q ss_pred HHHHHHHHHhh-ccccCCCCCCccccCCCCCCCCCCCCCCCCCCChhhhHHHHHHHHHhccccccccCCCCChHHHHHHH
Q 043885 443 LKKANNYIKTT-QVRTKSFEDPSCWYRHEFQEGWPFSSLDNGWIATDTTAEGLNVSVLLSEMSYDLVGEAIPLNRLFEAV 521 (765)
Q Consensus 443 l~kA~~~L~~~-Q~~~~~~Gd~~~~~~~~~~GgW~fs~~~~~~pd~D~TA~aL~aL~~l~~~~~~~~g~~~~~~~l~~av 521 (765)
.++.++||+++ |... | ||...+.+..| .+-.+|.||..+ |.+++.+.+++++
T Consensus 75 ~~~hi~~l~~~lq~~~---g------------g~~a~D~~r~~----l~y~~l~aL~lL--------g~~~~~~~~~r~v 127 (437)
T 2h6f_B 75 REKHFHYLKRGLRQLT---D------------AYECLDASRPW----LCYWILHSLELL--------DEPIPQIVATDVC 127 (437)
T ss_dssp HHHHHHHHHHHTTEEC---G------------GGGGGTTCHHH----HHHHHHHHHHHT--------TCCCCHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCC---C------------CcccccCCCcc----HHHHHHHHHHHh--------CCCCCHHHHHHHH
Confidence 48899999999 7653 4 44433332211 122345555444 4456778999999
Q ss_pred HHHHhccccCCCccccccCCCcchhhccccccccccccccCCccCcHHHHHHHHHhccCcCCccchhHHHHHHHHHHHHH
Q 043885 522 NVVLSLQNSSGGVASYERTRSYAWMEMLNPVENFGESIIDYQYVECTSSTIQCLKSFTKHYPKHRRREIEEFIAKGANFI 601 (765)
Q Consensus 522 ~~Lls~Qn~dGGw~~~e~~~~~~~le~l~p~e~f~~~~~d~~~~d~Ta~~l~aL~~~~~~~p~~r~~~i~~~I~rAv~~L 601 (765)
+||+++|++||||+.++.+ .+++.+|..+|++|..++... ..++ ..++||++||
T Consensus 128 ~~l~s~Q~~dGGf~g~~~~---------------------~~~i~~T~~Al~aL~~lg~~~---~~~~--i~i~kav~~L 181 (437)
T 2h6f_B 128 QFLELCQSPEGGFGGGPGQ---------------------YPHLAPTYAAVNALCIIGTEE---AYDI--INREKLLQYL 181 (437)
T ss_dssp HHHHHHBCTTSSBBSSTTC---------------------CBCHHHHHHHHHHHHHHCCHH---HHTT--SCHHHHHHHH
T ss_pred HHHHHhCCCCCCcCCccCC---------------------CcchhHHHHHHHHHHHhCCcc---cccc--hHHHHHHHHH
Confidence 9999999999999976532 235678999999999997531 0011 2378999999
Q ss_pred HHhcCCCCCCCCC-CCCCchhHHHHHHHHHHHcCCCCCChHHHHHHHHHHHhcccCCCccccccccccccccccCCCCCC
Q 043885 602 ESIQRPDGWWYGS-WGVCFTYGTWFGIKGLVDSGRKYENSRSIRKACDFLLSKQLDSGGWGESYVSCVDRVYTNLEGNKA 680 (765)
Q Consensus 602 ~~~Q~~DGsW~g~-wg~~~~YgT~~al~aL~aaG~~~~~~~~i~rav~~Lls~Q~~DGGWGes~~s~~~~~Y~~l~g~~S 680 (765)
++.|++||||++. ||.+++++|..++.+|..+|.. +++.++|+++||+++|++|||||++. ++.|
T Consensus 182 ~s~Q~~DGsf~~~~~Ge~d~~~ty~A~~~L~llg~~--~~~~v~k~~~~L~s~Q~~DGGwg~~p------------g~eS 247 (437)
T 2h6f_B 182 YSLKQPDGSFLMHVGGEVDVRSAYCAASVASLTNII--TPDLFEGTAEWIARCQNWEGGIGGVP------------GMEA 247 (437)
T ss_dssp HTTBCTTSCBBSSTTCCBSHHHHHHHHHHHHHTTCC--CTTTTTTHHHHHHHHBCTTSSBCSST------------TSCC
T ss_pred HHhCCCCCCeeecCCCCccchhHHHHHHHHHHhCCC--ChHHHHHHHHHHHHccCCCCCcCCCC------------CCCC
Confidence 9999999999996 9988888888888888888875 56789999999999999999999862 6789
Q ss_pred cHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHhcCc-CCCCCCCCccccccCCccc
Q 043885 681 HNVNTAWAMLALIEAGQAHRDPTPLHRAARVLINSQM-ENGDFPQQEIMGSFTRNCM 736 (765)
Q Consensus 681 ~~~~TAwALlAL~~aG~~~~d~~~i~rav~~L~~~Q~-~dG~w~~~~~~g~f~~~~~ 736 (765)
|+.+|+|||+||+.+|..+ +..++|+++||+++|. ++|+|... ++..+..||
T Consensus 248 h~~~T~~Al~aL~~lg~~~--~~~~~rl~~wL~~rQ~~~~GGf~gR--p~K~~D~cY 300 (437)
T 2h6f_B 248 HGGYTFCGLAALVILKRER--SLNLKSLLQWVTSRQMRFEGGFQGR--CNKLVDGCY 300 (437)
T ss_dssp CHHHHHHHHHHHHHHTCGG--GSCHHHHHHHHHHTBCTTTCSBBSS--TTSCBCTTH
T ss_pred CccHHHHHHHHHHHcCCCC--cccHHHHHHHHHhcCCCCCCCccCC--CCCccchHH
Confidence 9999999999999999864 3359999999999998 88999764 234556676
No 6
>1n4q_B Geranyltransferase type-I beta subunit; protein geranylgeranyltransferase type-I, ggtase; HET: MGM GER; 2.40A {Rattus norvegicus} SCOP: a.102.4.3 PDB: 1n4p_B* 1n4r_B* 1n4s_B* 1s64_B* 1tnb_B* 1tno_B* 1tnu_B* 1tny_B* 1tnz_B*
Probab=99.93 E-value=6.9e-26 Score=249.03 Aligned_cols=209 Identities=14% Similarity=0.098 Sum_probs=167.8
Q ss_pred hHHHHHHHHHhccccccccCCCCChHHHHHHHHHHHhccc---------cCCCccccccCCCcchhhccccccccccccc
Q 043885 490 TAEGLNVSVLLSEMSYDLVGEAIPLNRLFEAVNVVLSLQN---------SSGGVASYERTRSYAWMEMLNPVENFGESII 560 (765)
Q Consensus 490 TA~aL~aL~~l~~~~~~~~g~~~~~~~l~~av~~Lls~Qn---------~dGGw~~~e~~~~~~~le~l~p~e~f~~~~~ 560 (765)
+=.+|.+|..+.... .++ .+++++||+++|+ +||||+.++..+.+. .+..||.+ ++++
T Consensus 51 ~yw~l~~L~lLg~l~------~~~---~~~~i~wils~Q~~p~~~~~~~~~GGF~g~~~~~~p~-~d~~~~~~---~~~~ 117 (377)
T 1n4q_B 51 AFFALSGLDMLDSLD------VVN---KDDIIEWIYSLQVLPTEDRSNLDRCGFRGSSYLGIPF-NPSKNPGT---AHPY 117 (377)
T ss_dssp HHHHHHHHHHTTCGG------GSC---HHHHHHHHHTTEECCCTTCTTGGGCEECSSSTTCCCC-CSSCSCCC---CCTT
T ss_pred HHHHHHHHHHhCCCC------ccC---HHHHHHHHHHhcCCccccccCCCCCccCCCcccCCCh-hhhccccc---cccC
Confidence 444666666664321 122 6899999999999 799999998775443 46666664 6789
Q ss_pred cCCccCcHHHHHHHHHhccCcCCccchhHHHHHHHHHHHHHHHhcCCCCCCCC--CCCCCchhHHHHHHHHHHHcCCCCC
Q 043885 561 DYQYVECTSSTIQCLKSFTKHYPKHRRREIEEFIAKGANFIESIQRPDGWWYG--SWGVCFTYGTWFGIKGLVDSGRKYE 638 (765)
Q Consensus 561 d~~~~d~Ta~~l~aL~~~~~~~p~~r~~~i~~~I~rAv~~L~~~Q~~DGsW~g--~wg~~~~YgT~~al~aL~aaG~~~~ 638 (765)
|++++.+|..+|++|..++..++. ++ .+++++||++.|++||||++ .||.+++++|..|+.+|..+|..
T Consensus 118 d~~~v~~T~~Al~~L~~lg~~~~~-----id--~~~~~~fL~~~Q~~DGSf~g~~~wGe~DirftY~Al~~l~llg~~-- 188 (377)
T 1n4q_B 118 DSGHIAMTYTGLSCLIILGDDLSR-----VD--KEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCASCICYMLNNW-- 188 (377)
T ss_dssp CCCCHHHHHHHHHHHHHTTCCSTT-----SC--HHHHHHHHHHHBCTTSCBCSSTTCCCCBHHHHHHHHHHHHHTTCG--
T ss_pred CCCCHHHHHHHHHHHHHhCcccch-----hh--HHHHHHHHHHhcCCCCCeeeccCCCcchhHHHHHHHHHHHHhcCC--
Confidence 999999999999999999865432 22 37899999999999999999 59999999999999999998873
Q ss_pred ChHHHHHHHHHHHhcccCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHHhCCCCCC-c-HHHHHHHHHHHhcC
Q 043885 639 NSRSIRKACDFLLSKQLDSGGWGESYVSCVDRVYTNLEGNKAHNVNTAWAMLALIEAGQAHRD-P-TPLHRAARVLINSQ 716 (765)
Q Consensus 639 ~~~~i~rav~~Lls~Q~~DGGWGes~~s~~~~~Y~~l~g~~S~~~~TAwALlAL~~aG~~~~d-~-~~i~rav~~L~~~Q 716 (765)
+++.++|+++||+++|+.|||||+++ +.+||..+|+||+.+|..++..+.+ + .+++|+++||+++|
T Consensus 189 ~~~~v~ka~~fL~scQn~DGGfGe~p------------~~ESh~g~T~cAlaaL~llg~~~~~~~~~~~~rli~wL~~rQ 256 (377)
T 1n4q_B 189 SGMDMKKAISYIRRSMSYDNGLAQGA------------GLESHGGSTFCGIASLCLMGKLEEVFSEKELNRIKRWCIMRQ 256 (377)
T ss_dssp GGSCHHHHHHHHHHTBCTTSSBBSST------------TSCBCHHHHHHHHHHHHHHTCHHHHSCHHHHHHHHHHHHTTB
T ss_pred ChHHHHHHHHHHHHhcCCCCCCCCCC------------CCCCchhHHHHHHHHHHHhcCcccccchhhHHHHHHHHHhcC
Confidence 57789999999999999999999973 5679999999999999999865421 1 16999999999999
Q ss_pred cCCCCCCCCccccccCCccc
Q 043885 717 MENGDFPQQEIMGSFTRNCM 736 (765)
Q Consensus 717 ~~dG~w~~~~~~g~f~~~~~ 736 (765)
+|+|... +...+..||
T Consensus 257 --~gGf~GR--~nK~~D~CY 272 (377)
T 1n4q_B 257 --QNGYHGR--PNKPVDTCY 272 (377)
T ss_dssp --SSSBCSS--TTSCCCTTH
T ss_pred --CCCcCCC--CCcchhHHH
Confidence 7888655 344666776
No 7
>3q7a_B Farnesyltransferase beta subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_B* 3q78_B* 3q79_B* 3q75_B* 3q7f_B* 3sfx_B* 3sfy_B*
Probab=99.90 E-value=3.1e-23 Score=232.72 Aligned_cols=203 Identities=15% Similarity=0.110 Sum_probs=165.0
Q ss_pred CCCCChHHHHHHHHHHHhccccCCCccccccCCCcchhhccccccccccccccCCccCcHHHHHHHHHhccCcCCccchh
Q 043885 509 GEAIPLNRLFEAVNVVLSLQNSSGGVASYERTRSYAWMEMLNPVENFGESIIDYQYVECTSSTIQCLKSFTKHYPKHRRR 588 (765)
Q Consensus 509 g~~~~~~~l~~av~~Lls~Qn~dGGw~~~e~~~~~~~le~l~p~e~f~~~~~d~~~~d~Ta~~l~aL~~~~~~~p~~r~~ 588 (765)
|.+++.+..+++++||+++|++||||+.++.. .+++++.+|..+|++|..+++.+|+++.+
T Consensus 103 g~~ld~~~~~~~I~~Ils~Q~~dGGFgg~p~~-------------------~~~~hla~TysAV~aL~ilg~~~p~~~~~ 163 (520)
T 3q7a_B 103 GVALDQGTKDRVVSTLLHFLSPKGGFGGGPAN-------------------SQIPHLLPTYASVCSLAIAGNDSSTGGWK 163 (520)
T ss_dssp TCCCCHHHHHHHHHHHHTTBCTTSSBCSSCTT-------------------TSCCCHHHHHHHHHHHHHHCBSSTTSBHH
T ss_pred CCCCChHHHHHHHHHHHHHcCCCCCCCCCCCC-------------------CCCCcHHHHHHHHHHHHHhCccccchhhh
Confidence 55667788999999999999999999876521 24678999999999999999888888888
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCC-CCCCchhHHHHHHHHHHHcCCCCCChHHHHHHHHHHHhcccCCCcccccc---
Q 043885 589 EIEEFIAKGANFIESIQRPDGWWYGS-WGVCFTYGTWFGIKGLVDSGRKYENSRSIRKACDFLLSKQLDSGGWGESY--- 664 (765)
Q Consensus 589 ~i~~~I~rAv~~L~~~Q~~DGsW~g~-wg~~~~YgT~~al~aL~aaG~~~~~~~~i~rav~~Lls~Q~~DGGWGes~--- 664 (765)
+|+.+++++++||.+.|++||||++. ||.+++|+|+.|+.+|...|.. +.+.++|+++||+++|+.|||||++-
T Consensus 164 ~Id~~r~k~v~fL~slQ~~DGSF~g~~wGe~Dir~TY~Al~~L~lLg~~--~~~~v~kav~fI~scQn~DGGfGe~s~~~ 241 (520)
T 3q7a_B 164 DLAAARQSIYEFFMRCKRPDGGFVVCEGGEVDVRGTYCLLVVATLLDII--TPELLHNVDKFVSACQTYEGGFACASFPF 241 (520)
T ss_dssp HHHHTHHHHHHHHHHHBCTTSCBBSSTTCCBCHHHHHHHHHHHHHHTCC--CHHHHTTHHHHHHTTBCTTSSBCSCEEEE
T ss_pred hhhhHHHHHHHHHHHHhCCCCCEecCCCCCchHHHHHHHHHHHHHcCCC--ChHHHHHHHHHHHHhcCCCCCccCccccc
Confidence 88888999999999999999999995 9999999999999999999874 68899999999999999999999931
Q ss_pred ---------ccccccc-cccCCCCCCcHHHHHHHHHHHHHhCCCCC----CcHHHHHHHHHHHhcCc---CCCCCCCCcc
Q 043885 665 ---------VSCVDRV-YTNLEGNKAHNVNTAWAMLALIEAGQAHR----DPTPLHRAARVLINSQM---ENGDFPQQEI 727 (765)
Q Consensus 665 ---------~s~~~~~-Y~~l~g~~S~~~~TAwALlAL~~aG~~~~----d~~~i~rav~~L~~~Q~---~dG~w~~~~~ 727 (765)
.+...+. -.| +.+||.-.|..||.+|...+..+. +...+++-++||..+|. ++|+|....
T Consensus 242 ~~~~~~~~~~~~~rp~~~~P--g~EaHgGyTfCalAaL~lL~~l~~~~~~~~~d~~~l~~WL~~RQ~~~~e~GGF~GR~- 318 (520)
T 3q7a_B 242 PSVVPSTSAFPTSEPSCRVS--MAEAHGGYTSCSLNSHFLLTSVPLPSFPLSIDANAALRWTVLQQGEPIEGGGFRGRT- 318 (520)
T ss_dssp C------------CCSEEEE--CSCCCHHHHHHHHHHHHHHHTSCCTTCSCCCCHHHHHHHHHHTBCCGGGTTCBBSST-
T ss_pred cccccccccccccccccCCC--CCccchhHHHHHHHHHHHhccccccccccccCHHHHHHHHHHhCCcccCCCcccCCC-
Confidence 0000000 012 678999999999999988876420 11237899999999996 569987653
Q ss_pred ccccCCccc
Q 043885 728 MGSFTRNCM 736 (765)
Q Consensus 728 ~g~f~~~~~ 736 (765)
.-....||
T Consensus 319 -NKlvD~CY 326 (520)
T 3q7a_B 319 -NKLVDGCY 326 (520)
T ss_dssp -TSCBCTTH
T ss_pred -CCCCchhh
Confidence 44677786
No 8
>3dss_B Geranylgeranyl transferase type-2 subunit beta; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} SCOP: a.102.4.3 PDB: 1ltx_B* 3c72_B* 1dce_B 3dst_B* 3dsu_B* 3dsv_B* 3dsw_B* 3dsx_B* 3hxb_B* 3hxc_B* 3hxd_B* 3hxe_B* 3hxf_B* 3pz1_B* 3pz2_B* 3pz3_B* 4ehm_B* 4gts_B* 4gtt_B* 4gtv_B*
Probab=99.90 E-value=4.1e-23 Score=223.97 Aligned_cols=194 Identities=22% Similarity=0.268 Sum_probs=155.9
Q ss_pred hhhhHHHHHHHHHhccccccccCCCCChHHHHHHHHHHHhccccCCCccccccCCCcchhhccccccccccccccCCccC
Q 043885 487 TDTTAEGLNVSVLLSEMSYDLVGEAIPLNRLFEAVNVVLSLQNSSGGVASYERTRSYAWMEMLNPVENFGESIIDYQYVE 566 (765)
Q Consensus 487 ~D~TA~aL~aL~~l~~~~~~~~g~~~~~~~l~~av~~Lls~Qn~dGGw~~~e~~~~~~~le~l~p~e~f~~~~~d~~~~d 566 (765)
.-.|=.+|.+|..+... +....+++++||+++|++||||+.... ..+++.
T Consensus 47 ~~~~yw~l~~L~lLg~l---------~~~~r~~~i~~l~s~Q~~dGGF~g~~g---------------------~~~~l~ 96 (331)
T 3dss_B 47 MSGVYWGLTVMDLMGQL---------HRMNKEEILVFIKSCQHECGGVSASIG---------------------HDPHLL 96 (331)
T ss_dssp HHHHHHHHHHHHHTTCG---------GGSCHHHHHHHHHHTBCTTSCBBSSTT---------------------SCBCHH
T ss_pred HHHHHHHHHHHHHhCCC---------chhhHHHHHHHHhhhcCCCCCcCCCCC---------------------CCccHH
Confidence 34456677888777532 122357899999999999999986432 124567
Q ss_pred cHHHHHHHHHhccCcCCccchhHHHHHHHHHHHHHHHhcCCCCCCCCC-CCCCchhHHHHHHHHHHHcCCCCCChHHHHH
Q 043885 567 CTSSTIQCLKSFTKHYPKHRRREIEEFIAKGANFIESIQRPDGWWYGS-WGVCFTYGTWFGIKGLVDSGRKYENSRSIRK 645 (765)
Q Consensus 567 ~Ta~~l~aL~~~~~~~p~~r~~~i~~~I~rAv~~L~~~Q~~DGsW~g~-wg~~~~YgT~~al~aL~aaG~~~~~~~~i~r 645 (765)
+|..+|++|..++.. + +++ ++|+++||++.|++||||++. ||.++++.|+.|+.+|...|.. +...++|
T Consensus 97 ~Ty~Al~~L~~l~~~-~-----~id--~~k~~~fL~~~Q~~DGsf~~~~~ge~d~~~ty~Al~~L~llg~~--~~~~~~k 166 (331)
T 3dss_B 97 YTLSAVQILTLYDSI-H-----VIN--VDKVVAYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKL--DAINVEK 166 (331)
T ss_dssp HHHHHHHHHHHTTCG-G-----GSC--HHHHHHHHHHTBCTTSCBBSSTTCCBCHHHHHHHHHHHHHHTCG--GGSCHHH
T ss_pred HHHHHHHHHHHcCCc-c-----HHH--HHHHHHHHhccCCCCCCEecccCCCCchHHHHHHHHHHHhcCCC--CHHHHHH
Confidence 899999999988532 1 122 789999999999999999986 9988888899999999988875 4678999
Q ss_pred HHHHHHhcccCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHhcCcCCCCCCCC
Q 043885 646 ACDFLLSKQLDSGGWGESYVSCVDRVYTNLEGNKAHNVNTAWAMLALIEAGQAHRDPTPLHRAARVLINSQMENGDFPQQ 725 (765)
Q Consensus 646 av~~Lls~Q~~DGGWGes~~s~~~~~Y~~l~g~~S~~~~TAwALlAL~~aG~~~~d~~~i~rav~~L~~~Q~~dG~w~~~ 725 (765)
+++||+++|++|||||++. +.+|+..+|+||+.+|..+|..+ +..++|+++||+++|+++|+|...
T Consensus 167 ~v~~L~s~Q~~dGGfg~~p------------g~esh~~~T~~al~aL~llg~~~--~~~~~~~~~wL~~~Q~~dGGf~gr 232 (331)
T 3dss_B 167 AIEFVLSCMNFDGGFGCRP------------GSESHAGQIYCCTGFLAITSQLH--QVNSDLLGWWLCERQLPSGGLNGR 232 (331)
T ss_dssp HHHHHHTTBCTTSCBCSST------------TCCCCHHHHHHHHHHHHHTTCGG--GSCHHHHHHHHHTTBCTTSCBCSS
T ss_pred HHHHHHHhCcCCCCcCCCC------------CCCCcHHHHHHHHHHHHhccccc--hhhHHHHHHHHHHhCCCCCCcCCC
Confidence 9999999999999999872 67899999999999999998764 234899999999999999999865
Q ss_pred ccccccCCccc
Q 043885 726 EIMGSFTRNCM 736 (765)
Q Consensus 726 ~~~g~f~~~~~ 736 (765)
. +..+..||
T Consensus 233 ~--~k~~D~cy 241 (331)
T 3dss_B 233 P--EKLPDVCY 241 (331)
T ss_dssp T--TCCCCHHH
T ss_pred C--CCCCcchh
Confidence 2 34566665
No 9
>3dss_B Geranylgeranyl transferase type-2 subunit beta; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} SCOP: a.102.4.3 PDB: 1ltx_B* 3c72_B* 1dce_B 3dst_B* 3dsu_B* 3dsv_B* 3dsw_B* 3dsx_B* 3hxb_B* 3hxc_B* 3hxd_B* 3hxe_B* 3hxf_B* 3pz1_B* 3pz2_B* 3pz3_B* 4ehm_B* 4gts_B* 4gtt_B* 4gtv_B*
Probab=99.89 E-value=3e-22 Score=217.20 Aligned_cols=280 Identities=17% Similarity=0.133 Sum_probs=204.3
Q ss_pred HHHHHHHHHhhhheeccCCceeeccCCCchhHHHHHHHHHHHcCCCCcchHHHHHHHHHHHhhccccCCCCCCccccCCC
Q 043885 391 AYKHHLARIKDYLWVAEDGMKMQAYNGSQLWDTAFAVHAILSTNLVDEYGSMLKKANNYIKTTQVRTKSFEDPSCWYRHE 470 (765)
Q Consensus 391 ~~~~~l~~l~~~l~~~~dG~~~q~~~gs~~WDTalai~AL~~ag~~~~~~~~l~kA~~~L~~~Q~~~~~~Gd~~~~~~~~ 470 (765)
...+|++.+.+.+- ..+.......+.+.+|-+-|++.+|.-.|..+. ...+++++||++.|..+ |+|.
T Consensus 19 ~~~~h~~y~~~~~~-~~~~~~~~~~d~~r~~~~yw~l~~L~lLg~l~~--~~r~~~i~~l~s~Q~~d---GGF~------ 86 (331)
T 3dss_B 19 LLEKHADYIASYGS-KKDDYEYCMSEYLRMSGVYWGLTVMDLMGQLHR--MNKEEILVFIKSCQHEC---GGVS------ 86 (331)
T ss_dssp CHHHHHHHHHHTTS-SSCGGGSGGGGGGHHHHHHHHHHHHHHTTCGGG--SCHHHHHHHHHHTBCTT---SCBB------
T ss_pred hHHHHHHHHHHhcc-CCCCccceeccccHHHHHHHHHHHHHHhCCCch--hhHHHHHHHHhhhcCCC---CCcC------
Confidence 46899999887632 122222333345789999999999999985432 34688999999999653 5553
Q ss_pred CCCCCCCCCCCCCCCChhhhHHHHHHHHHhccccccccCCCCChHHHHHHHHHHHhccccCCCccccccCCCcchhhccc
Q 043885 471 FQEGWPFSSLDNGWIATDTTAEGLNVSVLLSEMSYDLVGEAIPLNRLFEAVNVVLSLQNSSGGVASYERTRSYAWMEMLN 550 (765)
Q Consensus 471 ~~GgW~fs~~~~~~pd~D~TA~aL~aL~~l~~~~~~~~g~~~~~~~l~~av~~Lls~Qn~dGGw~~~e~~~~~~~le~l~ 550 (765)
.+. ...|++-+|..||.+|..+... ....++++++||.++|++||||.....
T Consensus 87 ------g~~--g~~~~l~~Ty~Al~~L~~l~~~---------~~id~~k~~~fL~~~Q~~DGsf~~~~~----------- 138 (331)
T 3dss_B 87 ------ASI--GHDPHLLYTLSAVQILTLYDSI---------HVINVDKVVAYVQSLQKEDGSFAGDIW----------- 138 (331)
T ss_dssp ------SST--TSCBCHHHHHHHHHHHHHTTCG---------GGSCHHHHHHHHHHTBCTTSCBBSSTT-----------
T ss_pred ------CCC--CCCccHHHHHHHHHHHHHcCCc---------cHHHHHHHHHHHhccCCCCCCEecccC-----------
Confidence 221 1347889999999999877421 222378999999999999999973210
Q ss_pred cccccccccccCCccCcHHHHHHHHHhccCcCCccchhHHHHHHHHHHHHHHHhcCCCCCCCCCCCC-CchhHHHHHHHH
Q 043885 551 PVENFGESIIDYQYVECTSSTIQCLKSFTKHYPKHRRREIEEFIAKGANFIESIQRPDGWWYGSWGV-CFTYGTWFGIKG 629 (765)
Q Consensus 551 p~e~f~~~~~d~~~~d~Ta~~l~aL~~~~~~~p~~r~~~i~~~I~rAv~~L~~~Q~~DGsW~g~wg~-~~~YgT~~al~a 629 (765)
+. +++..|..++.+|.+++.. . ...++|+++||.+.|++||+|.+.++. .....|+.|+.+
T Consensus 139 -----ge-----~d~~~ty~Al~~L~llg~~--~------~~~~~k~v~~L~s~Q~~dGGfg~~pg~esh~~~T~~al~a 200 (331)
T 3dss_B 139 -----GE-----IDTRFSFCAVATLALLGKL--D------AINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGF 200 (331)
T ss_dssp -----CC-----BCHHHHHHHHHHHHHHTCG--G------GSCHHHHHHHHHTTBCTTSCBCSSTTCCCCHHHHHHHHHH
T ss_pred -----CC-----CchHHHHHHHHHHHhcCCC--C------HHHHHHHHHHHHHhCcCCCCcCCCCCCCCcHHHHHHHHHH
Confidence 10 1233466677777777642 1 134889999999999999999988774 456678899999
Q ss_pred HHHcCCCCCChHHHHHHHHHHHhcccCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHHhCCCCCCcHHHHHHH
Q 043885 630 LVDSGRKYENSRSIRKACDFLLSKQLDSGGWGESYVSCVDRVYTNLEGNKAHNVNTAWAMLALIEAGQAHRDPTPLHRAA 709 (765)
Q Consensus 630 L~aaG~~~~~~~~i~rav~~Lls~Q~~DGGWGes~~s~~~~~Y~~l~g~~S~~~~TAwALlAL~~aG~~~~d~~~i~rav 709 (765)
|..+|.. ....++|+++||+++|++||||+... ++.+++..|.|++.+|...|... ...+++++
T Consensus 201 L~llg~~--~~~~~~~~~~wL~~~Q~~dGGf~gr~------------~k~~D~cys~w~l~~L~llg~~~--~~~~~~~~ 264 (331)
T 3dss_B 201 LAITSQL--HQVNSDLLGWWLCERQLPSGGLNGRP------------EKLPDVCYSWWVLASLKIIGRLH--WIDREKLR 264 (331)
T ss_dssp HHHTTCG--GGSCHHHHHHHHHTTBCTTSCBCSST------------TCCCCHHHHHHHHHHHHHTTCGG--GSCHHHHH
T ss_pred HHhcccc--chhhHHHHHHHHHHhCCCCCCcCCCC------------CCCCcchhHHHHHHHHHHcCCcc--hhhHHHHH
Confidence 9998875 23458999999999999999997652 45678999999999999998653 23489999
Q ss_pred HHHHhcCcCC-CCCCCCccccccCCccccccCCccchHHHHHHHH
Q 043885 710 RVLINSQMEN-GDFPQQEIMGSFTRNCMISYSAWRNIFPIWALGA 753 (765)
Q Consensus 710 ~~L~~~Q~~d-G~w~~~~~~g~f~~~~~~~Y~~Yr~~fpl~ALg~ 753 (765)
+||+++|+.+ |+|...+ |.-+ +.|-.+|.|.||+.
T Consensus 265 ~fil~cQ~~~~GGf~~~p--g~~~-------d~~hT~~~l~~Ls~ 300 (331)
T 3dss_B 265 SFILACQDEETGGFADRP--GDMV-------DPFHTLFGIAGLSL 300 (331)
T ss_dssp HHHHHTBCTTTCCBCSST--TSCC-------BHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCCcCCCC--CCCC-------CHHHHHHHHHHHHH
Confidence 9999999987 9998652 3222 23446677777765
No 10
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1
Probab=99.88 E-value=5.5e-23 Score=224.34 Aligned_cols=202 Identities=12% Similarity=0.080 Sum_probs=146.3
Q ss_pred HHHHHHHHHHHhhccccCCCCCCccccCC--C------------------CCCCCC-CC---CCCCCCCChhhhHHHHHH
Q 043885 441 SMLKKANNYIKTTQVRTKSFEDPSCWYRH--E------------------FQEGWP-FS---SLDNGWIATDTTAEGLNV 496 (765)
Q Consensus 441 ~~l~kA~~~L~~~Q~~~~~~Gd~~~~~~~--~------------------~~GgW~-fs---~~~~~~pd~D~TA~aL~a 496 (765)
+.-+++.+.|+.-|... |+|.+...- . .+|.|. .. ..+.+.+|.|+|+.+|++
T Consensus 81 ~~A~~iAd~ll~~Q~~~---GGW~kn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~DnddTa~vl~a 157 (408)
T 1r76_A 81 KAARHVADVIVSFQTPA---GGWGKNQPRDGALRLPGQHYTGENVAKVKSGSNDLDAARDRDWHYVGTIDNDATVTEIRF 157 (408)
T ss_dssp HHHHHHHHHHHHHCCTT---SCCCSSCCSSSCCCCTTCCSSCCCCCCCC---------CCCCCSSSSBCGGGTTHHHHHH
T ss_pred HHHHHHHHHHHHccccC---CCCCCccccccccchhhhhcccccccccccccccchhhcccccCCCCCCCCchHHHHHHH
Confidence 34688899999999875 999764211 0 012220 11 124567999999999999
Q ss_pred HHHhccc-cccccCCCCChHHHHHHHHHHHhccccCCCccccccCCCcchhhccccccccccccccCCccCcHHHHHHHH
Q 043885 497 SVLLSEM-SYDLVGEAIPLNRLFEAVNVVLSLQNSSGGVASYERTRSYAWMEMLNPVENFGESIIDYQYVECTSSTIQCL 575 (765)
Q Consensus 497 L~~l~~~-~~~~~g~~~~~~~l~~av~~Lls~Qn~dGGw~~~e~~~~~~~le~l~p~e~f~~~~~d~~~~d~Ta~~l~aL 575 (765)
|..+... .. .+.+...+++.||++||++||++||||+.|.+++ ..++++|+ |.| |+|++||+.|
T Consensus 158 L~rv~~~~t~--~~~~~y~~Ai~Rgl~wlL~mQ~~nGGWpqFdpdn-~~y~~~Ip----FnD--------Dvt~rvle~L 222 (408)
T 1r76_A 158 LAQVVSQLAP--EEAAPYRDAALKGIEYLLASQFPNGGWPQVWPLE-GGYHDAIT----YND--------DALVHVAELL 222 (408)
T ss_dssp HHHHHHHSCG--GGCHHHHHHHHHHHHHHHHHSCTTSCCBSBSSCC-CGGGGSEE----CGG--------GHHHHHHHHH
T ss_pred HHHHHhhccc--cccHHHHHHHHHHHHHHHHccCCCCCCcCcCccc-cccccCCC----cCc--------HHHHHHHHHH
Confidence 9887542 10 0234578899999999999999999999999988 57888885 654 7899999999
Q ss_pred HhccCcCC------ccchhHHHHHHHHHHHHHHHhcCC-CCCCCCCCCCCchhHHHH----------HHHHHHHcC----
Q 043885 576 KSFTKHYP------KHRRREIEEFIAKGANFIESIQRP-DGWWYGSWGVCFTYGTWF----------GIKGLVDSG---- 634 (765)
Q Consensus 576 ~~~~~~~p------~~r~~~i~~~I~rAv~~L~~~Q~~-DGsW~g~wg~~~~YgT~~----------al~aL~aaG---- 634 (765)
..++...+ ...+....++|+||++||++.|.+ ||+|+ +||++|+|||+. +|.|+..++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~av~Rgi~~Ll~~Qe~~dGsw~-rWg~qY~ygT~~Pa~aRsYE~psLs~~esa~il~~ 301 (408)
T 1r76_A 223 SDIAAGRDGFGFVPPAIRTRALEATNAAIHCIVETQVVQDGKRL-GWGQQHDALTLRPTSARNFEPAALSSTESARILLF 301 (408)
T ss_dssp HHHHHTCTTCTTSCHHHHHHHHHHHHHHHHHHHHHSCEETTEEC-CCCSEECTTTCSBCCCSTTCCSCEEHHHHHHHHHH
T ss_pred HHHHhccCcccccchhhhhhHHHHHHHHHHHHHHhhcccCCccc-chhcccccccCcchhhhccCCccccHHHHHHHHHH
Confidence 88764111 112234668999999999999999 99999 999999999987 555555442
Q ss_pred ---CCCC---ChHHHHHHHHHHHhcccCCCccc
Q 043885 635 ---RKYE---NSRSIRKACDFLLSKQLDSGGWG 661 (765)
Q Consensus 635 ---~~~~---~~~~i~rav~~Lls~Q~~DGGWG 661 (765)
.... ..++|++|++||.++|++||+|-
T Consensus 302 LM~~~~~~~~~~~aI~~Av~WL~s~Q~~dg~w~ 334 (408)
T 1r76_A 302 LMEIEAPSDAVKQAIRGGVAWLNTSVIRDRAWV 334 (408)
T ss_dssp HTTSSSCCHHHHHHHHHHHHHHHHSCCCC----
T ss_pred HccCCCCCHHHHHHHHHHHHHHHHhhcCCCcee
Confidence 2211 23489999999999999999996
No 11
>2wy7_A Complement C3D fragment; immune system, immune response, innate immunity, complement inflammatory response; 1.70A {Homo sapiens} PDB: 2wy8_A 3oed_A 3oxu_A 3rj3_A 1ghq_A* 1w2s_A
Probab=99.88 E-value=5.8e-22 Score=213.43 Aligned_cols=199 Identities=16% Similarity=0.154 Sum_probs=151.0
Q ss_pred HHHHHHHHHHHhccccCCCccccccCCCcchhhccccccccccccccCCccCcHHHHHHHHHhccCcCCccchhHHHHHH
Q 043885 515 NRLFEAVNVVLSLQNSSGGVASYERTRSYAWMEMLNPVENFGESIIDYQYVECTSSTIQCLKSFTKHYPKHRRREIEEFI 594 (765)
Q Consensus 515 ~~l~~av~~Lls~Qn~dGGw~~~e~~~~~~~le~l~p~e~f~~~~~d~~~~d~Ta~~l~aL~~~~~~~p~~r~~~i~~~I 594 (765)
+.|++|+++++++|++||||++|+..+ +....|+.|+.+|..+++.... .++.|
T Consensus 54 ~~i~~g~~~~l~~q~~dGgf~~f~~~~---------------------~s~wlTa~v~~~l~~a~~~~~v-----~~~~i 107 (310)
T 2wy7_A 54 ELIKKGYTQQLAFRQPSSAFAAFVKRA---------------------PSTWLTAYVVKVFSLAVNLIAI-----DSQVL 107 (310)
T ss_dssp HHHHHHHHHHHTTBCTTSCBCSSTTSC---------------------CCHHHHHHHHHHHHHHTTTSCC-----CHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCcccCCCCC---------------------ccHHHHHHHHHHHHHHHhcCCC-----CHHHH
Confidence 568889999999999999999987543 2345699999999998753221 14789
Q ss_pred HHHHHHHHH-hcCCCCCCCCCCCCCc--------------hhHHHHHHHHHHHcC------CCCCChHHHHHHHHHHHhc
Q 043885 595 AKGANFIES-IQRPDGWWYGSWGVCF--------------TYGTWFGIKGLVDSG------RKYENSRSIRKACDFLLSK 653 (765)
Q Consensus 595 ~rAv~~L~~-~Q~~DGsW~g~wg~~~--------------~YgT~~al~aL~aaG------~~~~~~~~i~rav~~Lls~ 653 (765)
++|++||.+ .|++||+|.+.|++++ .+.|++++.+|..+| .. ..++.|+||++||.++
T Consensus 108 ~~a~~~L~~~~Q~~dGsf~~~~~~~~~~~~g~~~~~~~~~~~~ta~vl~aL~~~~~~~~~~~~-~~~~~i~~A~~~L~~~ 186 (310)
T 2wy7_A 108 CGAVKWLILEKQKPDGVFQEDAPVIHQEMIGGLRNNNEKDMALTAFVLISLQEAKDICEEQVN-SLPGSITKAGDFLEAN 186 (310)
T ss_dssp HHHHHHHHHHHBCTTSCBCCSSCCSCGGGGGGGTTCSCHHHHHHHHHHHHHHHHHHHHTTTCT-THHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCCccccCCCccCHhhcCCcccccccccchHHHHHHHHHhcccccccCCc-chHHHHHHHHHHHHHH
Confidence 999999996 9999999999998764 566999999999874 33 2578999999999999
Q ss_pred ccC-CCccccccccc--------------------cccccccCCCCC-CcHHHHHHHHHHHHHhCCCCCCcHHHHHHHHH
Q 043885 654 QLD-SGGWGESYVSC--------------------VDRVYTNLEGNK-AHNVNTAWAMLALIEAGQAHRDPTPLHRAARV 711 (765)
Q Consensus 654 Q~~-DGGWGes~~s~--------------------~~~~Y~~l~g~~-S~~~~TAwALlAL~~aG~~~~d~~~i~rav~~ 711 (765)
|++ +++|+....++ .+..|-.-.+.. .++.+|||||+||+.++.. +.+.++++|
T Consensus 187 ~~~~~~~y~~a~~ayAL~l~g~~~~~~l~~l~~~~~~~~~w~~~~~~~~~ve~Ta~aLlal~~~~~~----~~~~~~v~w 262 (310)
T 2wy7_A 187 YMNLQRSYTVAIAGYALAQMGRLKGPLLNKFLTTAKDKNRWEDPGKQLYNVEATSYALLALLQLKDF----DFVPPVVRW 262 (310)
T ss_dssp GGGCCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHSBTTTBCCCSSCHHHHHHHHHHHHHHHHHHTCT----TTHHHHHHH
T ss_pred hhccCCHHHHHHHHHHHHhcCCcHHHHHHHHHHhccCCCCCCCCCCcccchHHHHHHHHHHHhcCCh----hhHHHHHHH
Confidence 885 45554442222 011221101111 1678999999999999753 358999999
Q ss_pred HHhcCcCCCCCCCCccccccCCccccccCCccchHHHHHHHHHHHhccC
Q 043885 712 LINSQMENGDFPQQEIMGSFTRNCMISYSAWRNIFPIWALGAFYNRVLL 760 (765)
Q Consensus 712 L~~~Q~~dG~w~~~~~~g~f~~~~~~~Y~~Yr~~fpl~ALg~y~~~~~~ 760 (765)
|+++|+++|+|... +..+++|+||++|.+++..
T Consensus 263 L~~qq~~~Ggw~sT----------------q~T~~aL~AL~~y~~~~~~ 295 (310)
T 2wy7_A 263 LNEQRYYGGGYGST----------------QATFMVFQALAQYQKDAPD 295 (310)
T ss_dssp HHHTTCCCCSTTCH----------------HHHHHHHHHHHHHHHHCC-
T ss_pred HHHccCCCCCeecc----------------HHHHHHHHHHHHHHHHcCC
Confidence 99999999999753 3466899999999987654
No 12
>2h6f_B Protein farnesyltransferase beta subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.102.4.3 PDB: 1jcq_B* 1ld7_B* 1mzc_B* 1s63_B* 1sa4_B* 1tn6_B* 2f0y_B* 1ld8_B* 2iej_B* 3e37_B* 2h6h_B* 2h6g_B* 2h6i_B* 1o1t_B* 1o1s_B* 1o1r_B* 3eu5_B* 3pz4_B* 3e33_B* 1d8e_B* ...
Probab=99.88 E-value=4.7e-23 Score=230.61 Aligned_cols=208 Identities=13% Similarity=0.122 Sum_probs=163.4
Q ss_pred cccCCCCCCCCCCCCCCCCCCChhhhHHHHHHHHHhccccccccCCCCChHHHHHHHHHHHhc-cccCCCccccccCCCc
Q 043885 465 CWYRHEFQEGWPFSSLDNGWIATDTTAEGLNVSVLLSEMSYDLVGEAIPLNRLFEAVNVVLSL-QNSSGGVASYERTRSY 543 (765)
Q Consensus 465 ~~~~~~~~GgW~fs~~~~~~pd~D~TA~aL~aL~~l~~~~~~~~g~~~~~~~l~~av~~Lls~-Qn~dGGw~~~e~~~~~ 543 (765)
..||...+|.|+|+..++.+...||+ +.++++..... .+. ..-..+++++||+++ |+.+|||++++.++.
T Consensus 31 ~~~~~~~~~~~t~ts~~Q~~~~~~~~-~~~~~~~~~~~-----~~~--~~l~~~~hi~~l~~~lq~~~gg~~a~D~~r~- 101 (437)
T 2h6f_B 31 ARERLQDDSVETVTSIEQAKVEEKIQ-EVFSSYKFNHL-----VPR--LVLQREKHFHYLKRGLRQLTDAYECLDASRP- 101 (437)
T ss_dssp GGGSCCCTTCCCHHHHHHHHHHHHHH-HHHHTTCBTTB-----CCC--CCCCHHHHHHHHHHHTTEECGGGGGGTTCHH-
T ss_pred hheecccCCCCCCCHHHHHHHHHHHH-HHHHHHhhccc-----CCc--ccccHHHHHHHHHHcCCCCCCCcccccCCCc-
Confidence 34777888999999998888888888 67766543211 111 122358899999999 999999999887641
Q ss_pred chhhccccccccccccccCCccCcHHHHHHHHHhccCcCCccchhHHHHHHHHHHHHHHHhcCCCCCCCC-CCCCCchhH
Q 043885 544 AWMEMLNPVENFGESIIDYQYVECTSSTIQCLKSFTKHYPKHRRREIEEFIAKGANFIESIQRPDGWWYG-SWGVCFTYG 622 (765)
Q Consensus 544 ~~le~l~p~e~f~~~~~d~~~~d~Ta~~l~aL~~~~~~~p~~r~~~i~~~I~rAv~~L~~~Q~~DGsW~g-~wg~~~~Yg 622 (765)
|+ +-.++.+|..++...+ ++.++++++||.+.|++||+|.| .|+.+++++
T Consensus 102 -~l---------------------~y~~l~aL~lLg~~~~-------~~~~~r~v~~l~s~Q~~dGGf~g~~~~~~~i~~ 152 (437)
T 2h6f_B 102 -WL---------------------CYWILHSLELLDEPIP-------QIVATDVCQFLELCQSPEGGFGGGPGQYPHLAP 152 (437)
T ss_dssp -HH---------------------HHHHHHHHHHTTCCCC-------HHHHHHHHHHHHHHBCTTSSBBSSTTCCBCHHH
T ss_pred -cH---------------------HHHHHHHHHHhCCCCC-------HHHHHHHHHHHHHhCCCCCCcCCccCCCcchhH
Confidence 21 2235677877764211 35689999999999999999998 699999999
Q ss_pred HHHHHHHHHHcCCC--CCChHHHHHHHHHHHhcccCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHHhCCCCC
Q 043885 623 TWFGIKGLVDSGRK--YENSRSIRKACDFLLSKQLDSGGWGESYVSCVDRVYTNLEGNKAHNVNTAWAMLALIEAGQAHR 700 (765)
Q Consensus 623 T~~al~aL~aaG~~--~~~~~~i~rav~~Lls~Q~~DGGWGes~~s~~~~~Y~~l~g~~S~~~~TAwALlAL~~aG~~~~ 700 (765)
|+.||.+|...|.. . ....++||++||+++|++||||+++. ++.+++..|..|+.+|..+|..
T Consensus 153 T~~Al~aL~~lg~~~~~-~~i~i~kav~~L~s~Q~~DGsf~~~~------------~Ge~d~~~ty~A~~~L~llg~~-- 217 (437)
T 2h6f_B 153 TYAAVNALCIIGTEEAY-DIINREKLLQYLYSLKQPDGSFLMHV------------GGEVDVRSAYCAASVASLTNII-- 217 (437)
T ss_dssp HHHHHHHHHHHCCHHHH-TTSCHHHHHHHHHTTBCTTSCBBSST------------TCCBSHHHHHHHHHHHHHTTCC--
T ss_pred HHHHHHHHHHhCCcccc-cchHHHHHHHHHHHhCCCCCCeeecC------------CCCccchhHHHHHHHHHHhCCC--
Confidence 99999999999864 2 23468999999999999999998752 4567888888888888888864
Q ss_pred CcHHHHHHHHHHHhcCcCCCCCCCC
Q 043885 701 DPTPLHRAARVLINSQMENGDFPQQ 725 (765)
Q Consensus 701 d~~~i~rav~~L~~~Q~~dG~w~~~ 725 (765)
++..++|+++||+++|+.||+|.+.
T Consensus 218 ~~~~v~k~~~~L~s~Q~~DGGwg~~ 242 (437)
T 2h6f_B 218 TPDLFEGTAEWIARCQNWEGGIGGV 242 (437)
T ss_dssp CTTTTTTHHHHHHHHBCTTSSBCSS
T ss_pred ChHHHHHHHHHHHHccCCCCCcCCC
Confidence 2346899999999999999999875
No 13
>1qqf_A Protein (complement C3DG); alpha-alpha barrel, immune system; 1.45A {Rattus norvegicus} SCOP: a.102.4.4 PDB: 1qsj_A 3d5r_A 2noj_A 2gox_A 3d5s_A 1c3d_A 2xqw_A
Probab=99.87 E-value=2.6e-21 Score=205.02 Aligned_cols=197 Identities=16% Similarity=0.157 Sum_probs=149.9
Q ss_pred HHHHHHHHHHHhccccCCCccccccCCCcchhhccccccccccccccCCccCcHHHHHHHHHhccCcCCccchhHHHHHH
Q 043885 515 NRLFEAVNVVLSLQNSSGGVASYERTRSYAWMEMLNPVENFGESIIDYQYVECTSSTIQCLKSFTKHYPKHRRREIEEFI 594 (765)
Q Consensus 515 ~~l~~av~~Lls~Qn~dGGw~~~e~~~~~~~le~l~p~e~f~~~~~d~~~~d~Ta~~l~aL~~~~~~~p~~r~~~i~~~I 594 (765)
+.|++|+++++++|++||||++|+..+ +....|+.|+.+|..+++..+. .++.|
T Consensus 38 ~~i~~g~~~~l~~q~~dGgf~~f~~~~---------------------~s~wlTa~v~~~l~~a~~~~~v-----~~~~i 91 (277)
T 1qqf_A 38 ELIKKGYTQQLAFKQPISAYAAFNNRP---------------------PSTWLTAYVSRVFSLAANLIAI-----DSQVL 91 (277)
T ss_dssp HHHHHHHHHHHTTBCTTSCBCSSTTSC---------------------CCHHHHHHHHHHHHHHTTTSCC-----CHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCccccCCCC---------------------ccHHHHHHHHHHHHHHhhcCCC-----CHHHH
Confidence 568899999999999999999987543 3345799999999998753221 14789
Q ss_pred HHHHHHHHH-hcCCCCCCCCCCCCCc--------------hhHHHHHHHHHHHcC------CCCCChHHHHHHHHHHHhc
Q 043885 595 AKGANFIES-IQRPDGWWYGSWGVCF--------------TYGTWFGIKGLVDSG------RKYENSRSIRKACDFLLSK 653 (765)
Q Consensus 595 ~rAv~~L~~-~Q~~DGsW~g~wg~~~--------------~YgT~~al~aL~aaG------~~~~~~~~i~rav~~Lls~ 653 (765)
++|++||.+ .|++||+|.+.|++++ .+.|++++.+|..+| .. ..++.|+||++||.++
T Consensus 92 ~~a~~~L~~~~Q~~dG~f~~~~~~~~~~~~g~~~~~~~~~~~lta~vl~aL~~~~~~~~~~~~-~~~~~i~~A~~~L~~~ 170 (277)
T 1qqf_A 92 CGAVKWLILEKQKPDGVFQEDGPVIHQEMIGGFRNTKEADVSLTAFVLIALQEARDICEGQVN-SLPGSINKAGEYLEAS 170 (277)
T ss_dssp HHHHHHHHHHHBCTTSCBCCSSCCSCGGGGGGGGSCTTHHHHHHHHHHHHHHHHHHHHTTTCT-THHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCCccCCccccchhhcCCCCCCccCccchHHHHHHHHHhhhhccccCCC-chHHHHHHHHHHHHHH
Confidence 999999995 9999999999998764 567999999998873 33 2578999999999999
Q ss_pred ccC-CCcccccccccc--------------------ccccccCCCCC-CcHHHHHHHHHHHHHhCCCCCCcHHHHHHHHH
Q 043885 654 QLD-SGGWGESYVSCV--------------------DRVYTNLEGNK-AHNVNTAWAMLALIEAGQAHRDPTPLHRAARV 711 (765)
Q Consensus 654 Q~~-DGGWGes~~s~~--------------------~~~Y~~l~g~~-S~~~~TAwALlAL~~aG~~~~d~~~i~rav~~ 711 (765)
|++ +++|+....++. +..|-.-.+.. .++.+|||||+||+.++.. +.+.++++|
T Consensus 171 ~~~~~~~y~~a~~ayAl~l~g~~~~~~l~~l~~~~~~~~~w~~~~~~~~~ve~Ta~aLlal~~~~~~----~~~~~~v~w 246 (277)
T 1qqf_A 171 YLNLQRPYTVAIAGYALALMNKLEEPYLTKFLNTAKDRNRWEEPGQQLYNVEATSYALLALLLLKDF----DSVPPVVRW 246 (277)
T ss_dssp HTTCCCHHHHHHHHHHHHHTTCCCTTHHHHHHHHSBTTTBCCCTTCHHHHHHHHHHHHHHHHHTTCT----TSHHHHHHH
T ss_pred hccCCCHHHHHHHHHHHHHcCChHHHHHHHHHHhccCCCCCCCCCCccchhHHHHHHHHHHHhcCCh----hhHHHHHHH
Confidence 885 455544433220 11121100111 2678999999999999753 258999999
Q ss_pred HHhcCcCCCCCCCCccccccCCccccccCCccchHHHHHHHHHHHhc
Q 043885 712 LINSQMENGDFPQQEIMGSFTRNCMISYSAWRNIFPIWALGAFYNRV 758 (765)
Q Consensus 712 L~~~Q~~dG~w~~~~~~g~f~~~~~~~Y~~Yr~~fpl~ALg~y~~~~ 758 (765)
|+++|+++|+|... .-.++.|.||++|..++
T Consensus 247 L~~qq~~~Ggw~sT----------------q~T~~aL~AL~~y~~~~ 277 (277)
T 1qqf_A 247 LNDERYYGGGYGST----------------QATFMVFQALAQYRADV 277 (277)
T ss_dssp HHHCCCCTTSTTCH----------------HHHHHHHHHHHHHHHHC
T ss_pred HHHccCCCCCeecc----------------hHHHHHHHHHHHHHHhC
Confidence 99999999999864 34679999999998754
No 14
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A*
Probab=99.86 E-value=1.6e-22 Score=215.11 Aligned_cols=186 Identities=12% Similarity=0.148 Sum_probs=143.9
Q ss_pred HHHHHhhccccCCCCCCcccc--CCCCCCCCCCCCCCCCCCChhhhHHHHHHHHHhccccccccCCCCChHHHHHHHHHH
Q 043885 447 NNYIKTTQVRTKSFEDPSCWY--RHEFQEGWPFSSLDNGWIATDTTAEGLNVSVLLSEMSYDLVGEAIPLNRLFEAVNVV 524 (765)
Q Consensus 447 ~~~L~~~Q~~~~~~Gd~~~~~--~~~~~GgW~fs~~~~~~pd~D~TA~aL~aL~~l~~~~~~~~g~~~~~~~l~~av~~L 524 (765)
.+-|+.-|... |+|.+.. .....++ ...+.+.||.|+|+.+|++|..+.... +.+...+++.||++||
T Consensus 37 Ad~~l~~Q~~~---GGW~kn~d~~~~~~~~---~~~~~~t~DnddTa~vl~~Larv~~~~----~~~~y~~Ai~Rgl~wl 106 (332)
T 1gxm_A 37 ADVVLSYQQNN---GGWPKNLDYNSVGNGG---GGNESGTIDNGATITEMVFLAEVYKSG----GNTKYRDAVRKAANFL 106 (332)
T ss_dssp HHHHHHTCCTT---SCCCSCCCTTTCCCCC---CCCSCEECGGGTTHHHHHHHHHHHHHH----CCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCcCC---CCCCcceecccccccC---CCCCCCCccCccHHHHHHHHHHHhccc----cchHHHHHHHHHHHHH
Confidence 67788888865 9998742 1111111 112456799999999999998875321 2345678999999999
Q ss_pred HhccccCCCccccccCCCcchhhccccccccccccccCCccCcHHHHHHHHHhccCcCCccc--------hhHHHHHHHH
Q 043885 525 LSLQNSSGGVASYERTRSYAWMEMLNPVENFGESIIDYQYVECTSSTIQCLKSFTKHYPKHR--------RREIEEFIAK 596 (765)
Q Consensus 525 ls~Qn~dGGw~~~e~~~~~~~le~l~p~e~f~~~~~d~~~~d~Ta~~l~aL~~~~~~~p~~r--------~~~i~~~I~r 596 (765)
++||++||||+.|.+++ ..++++|+ |.| |+|++||+.|..++...+.+. .....++++|
T Consensus 107 L~mQ~~nGGWpqFdpd~-~~Yl~~Ip----FnD--------DvtarvLelL~~~~~~~~~~~~~~~~~~~~~~~~~av~R 173 (332)
T 1gxm_A 107 VNSQYSTGALPQFYPLK-GGYSDHAT----FND--------NGMAYALTVLDFAANKRAPFDTDVFSDNDRTRFKTAVTK 173 (332)
T ss_dssp HHHCCTTSCCBSEESCC-SGGGGSEE----CGG--------GHHHHHHHHHHHHHTTCTTSCSTTSCHHHHHHHHHHHHH
T ss_pred HhccCCCCCccccCCCc-ccccccCC----cch--------HHHHHHHHHHHHHHhccCCccccccccchhhhhHHHHHH
Confidence 99999999999999986 67888886 654 789999999998864222220 1345689999
Q ss_pred HHHHHHHhcCCCCCCCCCCCCCchhHHHH----------HHHHHHHcCC-----CCCChH----HHHHHHHHHHhccc
Q 043885 597 GANFIESIQRPDGWWYGSWGVCFTYGTWF----------GIKGLVDSGR-----KYENSR----SIRKACDFLLSKQL 655 (765)
Q Consensus 597 Av~~L~~~Q~~DGsW~g~wg~~~~YgT~~----------al~aL~aaG~-----~~~~~~----~i~rav~~Lls~Q~ 655 (765)
|++||++.|.+||||+++||++|.|+|+. +|.|+.++|. ....++ +|++|++||.++|+
T Consensus 174 gid~Llk~Qe~dggw~g~Wg~qydygT~~Pa~ARayE~psL~~~es~giv~~LM~~~~~~~v~~aI~~Av~WL~~~q~ 251 (332)
T 1gxm_A 174 GTDYILKAQWKQNGVLTVWCAQHGALDYQPKKARAYELESLSGSESVGVLAFLMTQPQTAEIEQAVRAGVAWFNSPRT 251 (332)
T ss_dssp HHHHHHHHSCEETTEECCCCSEECTTTCCBCCCSTTCCSSEETTTHHHHHHHHTTSCCCHHHHHHHHHHHHHHTCTTT
T ss_pred HHHHHHHhhCccCCCcCeeccccccccccccccccccccchhHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999998 8888877743 111244 79999999999999
No 15
>1hzf_A Complement factor C4A; alpha-alpha 6 barrel, immune system; 2.30A {Homo sapiens} SCOP: a.102.4.4
Probab=99.86 E-value=1.4e-21 Score=215.31 Aligned_cols=234 Identities=17% Similarity=0.115 Sum_probs=162.6
Q ss_pred CCCCCCCCCCCCCCChhhhHHHHHHHHHhcc---ccccccCCCCChHHHHHHHHHHHhccccCCCccccccCCCcchhhc
Q 043885 472 QEGWPFSSLDNGWIATDTTAEGLNVSVLLSE---MSYDLVGEAIPLNRLFEAVNVVLSLQNSSGGVASYERTRSYAWMEM 548 (765)
Q Consensus 472 ~GgW~fs~~~~~~pd~D~TA~aL~aL~~l~~---~~~~~~g~~~~~~~l~~av~~Lls~Qn~dGGw~~~e~~~~~~~le~ 548 (765)
++||++++.+..+|++ .++..|-...+ ...+ -.....+.|.+|+++|+++|++||||++|+.+++.
T Consensus 51 P~Gc~EQ~~s~~~P~~----~v~~~l~~~~~w~~~~~~--~~~~~~~~i~~g~~~ll~~Q~~dGgf~~~~~~~~~----- 119 (367)
T 1hzf_A 51 PRGCGEQTMIYLAPTL----AASRYLDKTEQWSTLPPE--TKDHAVDLIQKGYMRIQQFRKADGSYAAWLSRDSS----- 119 (367)
T ss_dssp CCSSHHHHHHHHHHHH----HHHHHHHHTTCSTTSCTT--HHHHHHHHHHHHHHHHHTTBCTTSCBCSSTTSCCC-----
T ss_pred CCCCHHHHHHHHHHHH----HHHHHHHHhhhcccCChh--HHHHHHHHHHHHHHHHHhccCCCCCeeccCCCCCc-----
Confidence 4789998776667754 34444332211 1100 00112457999999999999999999999865433
Q ss_pred cccccccccccccCCccCcHHHHHHHHHhccCcCCccchhHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCc---------
Q 043885 549 LNPVENFGESIIDYQYVECTSSTIQCLKSFTKHYPKHRRREIEEFIAKGANFIESIQRPDGWWYGSWGVCF--------- 619 (765)
Q Consensus 549 l~p~e~f~~~~~d~~~~d~Ta~~l~aL~~~~~~~p~~r~~~i~~~I~rAv~~L~~~Q~~DGsW~g~wg~~~--------- 619 (765)
...|+.|+++|..+++.+.. .++.|+||++||.+.|++||+|++.|.+.+
T Consensus 120 ----------------~~lTa~v~~~l~~a~~~~~v-----~~~~i~~a~~~L~~~Q~~dG~~~~~~~~~~~~~~gg~~~ 178 (367)
T 1hzf_A 120 ----------------TWLTAFVLKVLSLAQEQVGG-----SPEKLQETSNWLLSQQQADGSFQDPCPVLDRSMQGGLVG 178 (367)
T ss_dssp ----------------HHHHHHHHHHHHHHGGGTCC-----CHHHHHHHHHHHGGGBCTTSCBCCSSCCSCGGGGGGGSS
T ss_pred ----------------HHHHHHHHHHHHHHHHHhCC-----CHHHHHHHHHHHHHhhccCCCcccccccccccccCCCCC
Confidence 23699999999998764321 147899999999999999999999887644
Q ss_pred ----hhHHHHHHHHHHHcCCCCC----------ChHHHHHHHHHHHhc--cc----------------------------
Q 043885 620 ----TYGTWFGIKGLVDSGRKYE----------NSRSIRKACDFLLSK--QL---------------------------- 655 (765)
Q Consensus 620 ----~YgT~~al~aL~aaG~~~~----------~~~~i~rav~~Lls~--Q~---------------------------- 655 (765)
++.|++++.+|..+|.... .++.|+||++||.++ |+
T Consensus 179 ~~~~~~lTA~vl~aL~~~g~~~~~~~~~~~~~~~~~~i~ra~~yL~~~~~~~~~~~y~~Al~ayAL~l~~~~~~~~~~~~ 258 (367)
T 1hzf_A 179 NDETVALTAFVTIALHHGLAVFQDEGAEPLKQRVEASISKASSFLGEKASAGLLGAHAAAITAYALTLTKAPADLRGVAH 258 (367)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTCCTTTTHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CcccccchHHHHHHHHhhhccccccccchhhhhhHHHHHHHHHHHHHhhhcccCCHHHHHHHHHHHHhcCCcHHHHHHHH
Confidence 6789999999998775321 246899999999876 32
Q ss_pred --------CCCc---cccccccc-------cccc----cccCCCCCC-cHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHH
Q 043885 656 --------DSGG---WGESYVSC-------VDRV----YTNLEGNKA-HNVNTAWAMLALIEAGQAHRDPTPLHRAARVL 712 (765)
Q Consensus 656 --------~DGG---WGes~~s~-------~~~~----Y~~l~g~~S-~~~~TAwALlAL~~aG~~~~d~~~i~rav~~L 712 (765)
.+|+ |++...|- .++. +.+ ...| ++..|||||+||+..+. +.+.+.++++||
T Consensus 259 ~~L~~~a~~~~~~~~W~~~~~s~~~~~~~~~~~~~~~~~~~--~~~s~~vE~TAyaLLall~~~~---~~~~~~~iv~WL 333 (367)
T 1hzf_A 259 NNLMAMAQETGDNLYWGSVTGSQSNAVSPTPAPRNPSDPMP--QAPALWIETTAYALLHLLLHEG---KAEMADQASAWL 333 (367)
T ss_dssp HHHHTTCEECSSCEECC--------------------------CCCHHHHHHHHHHHHHHHHHTC---SSHHHHHHHHHH
T ss_pred HHHHHHhhhcCCCCccCCCCCcccccccccccccccccccC--CCccchhHHHHHHHHHHHhccC---chhhhHHHHHHH
Confidence 1343 77643220 0000 111 1223 78999999999998752 235689999999
Q ss_pred HhcCcCCCCCCCCccccccCCccccccCCccchHHHHHHHHHHHhc
Q 043885 713 INSQMENGDFPQQEIMGSFTRNCMISYSAWRNIFPIWALGAFYNRV 758 (765)
Q Consensus 713 ~~~Q~~dG~w~~~~~~g~f~~~~~~~Y~~Yr~~fpl~ALg~y~~~~ 758 (765)
+++|+.+|+|... .-.+..|.||++|....
T Consensus 334 ~~qrn~~Ggw~sT----------------qdTvvAL~AL~~y~~~~ 363 (367)
T 1hzf_A 334 TRQGSFQGGFRST----------------QDTVIALDALSAYWIAS 363 (367)
T ss_dssp HHHTTSTTCSCSH----------------HHHHHHHHHHHHHHHHH
T ss_pred HhCcCCCCCcccH----------------HHHHHHHHHHHHHHHHc
Confidence 9999999999864 34678999999997654
No 16
>1n4q_B Geranyltransferase type-I beta subunit; protein geranylgeranyltransferase type-I, ggtase; HET: MGM GER; 2.40A {Rattus norvegicus} SCOP: a.102.4.3 PDB: 1n4p_B* 1n4r_B* 1n4s_B* 1s64_B* 1tnb_B* 1tno_B* 1tnu_B* 1tny_B* 1tnz_B*
Probab=99.73 E-value=1.6e-16 Score=174.68 Aligned_cols=294 Identities=15% Similarity=0.123 Sum_probs=191.4
Q ss_pred HHHHHHHHHhhhheeccCCceeeccCCCchhHHHHHHHHHHHcCCCCcchHHHHHHHHHHHhhccccC------CCCCCc
Q 043885 391 AYKHHLARIKDYLWVAEDGMKMQAYNGSQLWDTAFAVHAILSTNLVDEYGSMLKKANNYIKTTQVRTK------SFEDPS 464 (765)
Q Consensus 391 ~~~~~l~~l~~~l~~~~dG~~~q~~~gs~~WDTalai~AL~~ag~~~~~~~~l~kA~~~L~~~Q~~~~------~~Gd~~ 464 (765)
..++|++.+.+.+-.-+ ..++..+.+.+|=+=|++.||.-.|..+++. .+++++||.+.|+..+ ..|+|.
T Consensus 21 ~~~~H~~y~~~~l~~lp--~~~~~~d~~r~~~~yw~l~~L~lLg~l~~~~--~~~~i~wils~Q~~p~~~~~~~~~GGF~ 96 (377)
T 1n4q_B 21 LRDRHVRFFQRCLQVLP--ERYSSLETSRLTIAFFALSGLDMLDSLDVVN--KDDIIEWIYSLQVLPTEDRSNLDRCGFR 96 (377)
T ss_dssp CHHHHHHHHHHHHHEEC--GGGGGGGGGHHHHHHHHHHHHHHTTCGGGSC--HHHHHHHHHTTEECCCTTCTTGGGCEEC
T ss_pred CHHHHHHHHHHHhhcCC--ccccccccchHHHHHHHHHHHHHhCCCCccC--HHHHHHHHHHhcCCccccccCCCCCccC
Confidence 47889998888762212 2345555678999999999999888644432 7899999999998310 014444
Q ss_pred cccCCCCCCCCCCCCC-------CCCCCChhhhHHHHHHHHHhccccccccCCCCChHHHHHHHHHHHhccccCCCcccc
Q 043885 465 CWYRHEFQEGWPFSSL-------DNGWIATDTTAEGLNVSVLLSEMSYDLVGEAIPLNRLFEAVNVVLSLQNSSGGVASY 537 (765)
Q Consensus 465 ~~~~~~~~GgW~fs~~-------~~~~pd~D~TA~aL~aL~~l~~~~~~~~g~~~~~~~l~~av~~Lls~Qn~dGGw~~~ 537 (765)
.+..+ +-+|.+. ..-.|.+.+|..||.+|..+... .+....+++++||.++|++||||...
T Consensus 97 g~~~~----~~p~~d~~~~~~~~~~d~~~v~~T~~Al~~L~~lg~~--------~~~id~~~~~~fL~~~Q~~DGSf~g~ 164 (377)
T 1n4q_B 97 GSSYL----GIPFNPSKNPGTAHPYDSGHIAMTYTGLSCLIILGDD--------LSRVDKEACLAGLRALQLEDGSFCAV 164 (377)
T ss_dssp SSSTT----CCCCCSSCSCCCCCTTCCCCHHHHHHHHHHHHHTTCC--------STTSCHHHHHHHHHHHBCTTSCBCSS
T ss_pred CCccc----CCChhhhccccccccCCCCCHHHHHHHHHHHHHhCcc--------cchhhHHHHHHHHHHhcCCCCCeeec
Confidence 32221 1112110 01148899999999999887531 11122378999999999999999642
Q ss_pred ccCCCcchhhccccccccccccccCCccCcHHHHHHHHHhccCcCCccchhHHHHHHHHHHHHHHHhcCCCCCCCCCCCC
Q 043885 538 ERTRSYAWMEMLNPVENFGESIIDYQYVECTSSTIQCLKSFTKHYPKHRRREIEEFIAKGANFIESIQRPDGWWYGSWGV 617 (765)
Q Consensus 538 e~~~~~~~le~l~p~e~f~~~~~d~~~~d~Ta~~l~aL~~~~~~~p~~r~~~i~~~I~rAv~~L~~~Q~~DGsW~g~wg~ 617 (765)
.. | +. .++--|-.++.++.+++.. . ...++|+++||++.|+.||+|...-+.
T Consensus 165 ~~-----w----------Ge-----~DirftY~Al~~l~llg~~--~------~~~v~ka~~fL~scQn~DGGfGe~p~~ 216 (377)
T 1n4q_B 165 PE-----G----------SE-----NDMRFVYCASCICYMLNNW--S------GMDMKKAISYIRRSMSYDNGLAQGAGL 216 (377)
T ss_dssp TT-----C----------CC-----CBHHHHHHHHHHHHHTTCG--G------GSCHHHHHHHHHHTBCTTSSBBSSTTS
T ss_pred cC-----C----------Cc-----chhHHHHHHHHHHHHhcCC--C------hHHHHHHHHHHHHhcCCCCCCCCCCCC
Confidence 10 0 00 1122344455566666541 1 135899999999999999999765442
Q ss_pred -CchhHHHHHHHHHHHcCCCCC--ChHHHHHHHHHHHhcccCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHH
Q 043885 618 -CFTYGTWFGIKGLVDSGRKYE--NSRSIRKACDFLLSKQLDSGGWGESYVSCVDRVYTNLEGNKAHNVNTAWAMLALIE 694 (765)
Q Consensus 618 -~~~YgT~~al~aL~aaG~~~~--~~~~i~rav~~Lls~Q~~DGGWGes~~s~~~~~Y~~l~g~~S~~~~TAwALlAL~~ 694 (765)
...-.|+.|+.+|...|.... ....+.|+++||.++| +||+.... ++..++--|-|++-+|..
T Consensus 217 ESh~g~T~cAlaaL~llg~~~~~~~~~~~~rli~wL~~rQ--~gGf~GR~------------nK~~D~CYSfWv~~~l~i 282 (377)
T 1n4q_B 217 ESHGGSTFCGIASLCLMGKLEEVFSEKELNRIKRWCIMRQ--QNGYHGRP------------NKPVDTCYSFWVGATLKL 282 (377)
T ss_dssp CBCHHHHHHHHHHHHHHTCHHHHSCHHHHHHHHHHHHTTB--SSSBCSST------------TSCCCTTHHHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHhcCcccccchhhHHHHHHHHHhcC--CCCcCCCC------------CcchhHHHHHHHHHHHHH
Confidence 333347778888887775421 1127899999999999 89995431 344677889999999988
Q ss_pred hCCCCCCcHHHHHHHHHHHhcCcC-CCCCCCCccccccCCccccccCCccchHHHHHHHH
Q 043885 695 AGQAHRDPTPLHRAARVLINSQME-NGDFPQQEIMGSFTRNCMISYSAWRNIFPIWALGA 753 (765)
Q Consensus 695 aG~~~~d~~~i~rav~~L~~~Q~~-dG~w~~~~~~g~f~~~~~~~Y~~Yr~~fpl~ALg~ 753 (765)
.+... -...++-.+||+++|.+ +|+|.... |..|. .|-.+|-|-+|+-
T Consensus 283 L~~~~--~~d~~~l~~fil~cQ~~~~GGf~~~p--~~~~D-------~~HT~~~LagLsl 331 (377)
T 1n4q_B 283 LKIFQ--YTNFEKNRNYILSTQDRLVGGFAKWP--DSHPD-------ALHAYFGICGLSL 331 (377)
T ss_dssp TTCGG--GSCHHHHHHHHHTTBCTTTCSBCSST--TSCCB-------HHHHHHHHHHHHH
T ss_pred hCCcc--ccCHHHHHHHHHHHcCCCCCCcCCCC--CCCCC-------HHHHHHHHHHHHh
Confidence 87542 11256788999999998 89876542 33332 2334466666653
No 17
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=99.66 E-value=2.9e-16 Score=198.90 Aligned_cols=197 Identities=16% Similarity=0.158 Sum_probs=149.6
Q ss_pred HHHHHHHHHHHhccccCCCccccccCCCcchhhccccccccccccccCCccCcHHHHHHHHHhccCcCCccchhHHHHHH
Q 043885 515 NRLFEAVNVVLSLQNSSGGVASYERTRSYAWMEMLNPVENFGESIIDYQYVECTSSTIQCLKSFTKHYPKHRRREIEEFI 594 (765)
Q Consensus 515 ~~l~~av~~Lls~Qn~dGGw~~~e~~~~~~~le~l~p~e~f~~~~~d~~~~d~Ta~~l~aL~~~~~~~p~~r~~~i~~~I 594 (765)
+.+.+|+++|+++|++||||++|+..++ +...|+.|+.+|..+.+.. +. ..++.+
T Consensus 872 ~~i~~g~~rll~~q~~dGgf~~f~~~~~---------------------s~~lTa~v~~~l~~a~~~~--~~--v~~~~l 926 (1325)
T 2pn5_A 872 NLLRQGYQNQMRYRQTDGSFGLWETTNG---------------------SVFLTAFVGTSMQTAVKYI--SD--IDAAMV 926 (1325)
T ss_dssp HHHHHHHHHHGGGBCTTSCBCSSSSSCC---------------------CHHHHHHHHHHHHHHTTTC--SC--SCHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCeeccCCCCC---------------------CeeehHHHHHHHHHHHhhE--Ec--CCHHHH
Confidence 4588899999999999999999975433 3456999999999886531 10 014789
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCC----------chhHHHHHHHHHHHcCCCC-CChHHHHHHHHHHHhcccC-CCcccc
Q 043885 595 AKGANFIESIQRPDGWWYGSWGVC----------FTYGTWFGIKGLVDSGRKY-ENSRSIRKACDFLLSKQLD-SGGWGE 662 (765)
Q Consensus 595 ~rAv~~L~~~Q~~DGsW~g~wg~~----------~~YgT~~al~aL~aaG~~~-~~~~~i~rav~~Lls~Q~~-DGGWGe 662 (765)
++|++||.+.|++||+|.+.|.+. ..+.|++++.+|...|... .....+++|++||.++|+. +++|+.
T Consensus 927 ~~a~~~L~~~q~~dG~f~~~~~~~~~~~~g~~~~~~~~tayvl~aL~~~g~~~~~~~~~i~~a~~~L~~~~~~~~~~~~~ 1006 (1325)
T 2pn5_A 927 EKALDWLASKQHFSGRFDKAGAEYHKEMQGGLRNGVALTSYVLMALLENDIAKAKHAEVIQKGMTYLSNQFGSINNAYDL 1006 (1325)
T ss_dssp HHHHHHHHHTCCTTSCCCCCSCCSCHHHHCCSSTTHHHHHHHHHHHHTCHHHHHHTHHHHHHHHHHHHHHGGGCCCHHHH
T ss_pred HHHHHHHHhhhccCCCccccccccChhhcCcccCCccccHHHHHHHhhCcccccccHHHHHHHHHHHHHhhcccCCHHHH
Confidence 999999999999999998876532 2445789998998766431 1346899999999999987 899988
Q ss_pred cccccc-----c---------------------cccccCCCCCCcHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHhcC
Q 043885 663 SYVSCV-----D---------------------RVYTNLEGNKAHNVNTAWAMLALIEAGQAHRDPTPLHRAARVLINSQ 716 (765)
Q Consensus 663 s~~s~~-----~---------------------~~Y~~l~g~~S~~~~TAwALlAL~~aG~~~~d~~~i~rav~~L~~~Q 716 (765)
...++. + ..|- ...|++.+|||||+||+.++. ...+.+.++||+++|
T Consensus 1007 a~~ayaL~l~g~~~~~~~l~~L~~~~~~~~~~~~~~w---~~~s~ve~tA~aLlall~~~~----~~~~~~~v~wL~~q~ 1079 (1325)
T 2pn5_A 1007 SIATYAMMLNGHTMKEEALNKLIDMSFIDADKNERFW---NTTNPIETTAYALLSFVMAEK----YTDGIPVMNWLVNQR 1079 (1325)
T ss_dssp HHHHHHHHHHTCTTHHHHHHHHHHTCEEETTTTEEEC---CSSSHHHHHHHHHHHHHHTTC----HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCchHHHHHHHHHhhhhhccCCCcccC---CCCCchHHHHHHHHHHhhhcc----chhhHHHHHHHHhcc
Confidence 754321 0 1111 114678899999999999863 346889999999999
Q ss_pred cCCCCCCCCccccccCCccccccCCccchHHHHHHHHHHHhcc
Q 043885 717 MENGDFPQQEIMGSFTRNCMISYSAWRNIFPIWALGAFYNRVL 759 (765)
Q Consensus 717 ~~dG~w~~~~~~g~f~~~~~~~Y~~Yr~~fpl~ALg~y~~~~~ 759 (765)
+.+|+|... ..++++|+||++|.....
T Consensus 1080 ~~~g~w~sT----------------q~T~~aL~AL~~y~~~~~ 1106 (1325)
T 2pn5_A 1080 YVTGSFPST----------------QDTFVGLKALTKMAEKIS 1106 (1325)
T ss_dssp CTTSSCSSH----------------HHHHHHHHHHHHHHHHHS
T ss_pred CCCCCccch----------------HHHHHHHHHHHHHHHHcC
Confidence 999999853 236699999999987643
No 18
>2hr0_B Complement C3 alpha' chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2icf_B* 2wii_B* 2win_B* 3g6j_B 3l5n_B* 2a73_B* 2i07_B* 2xwj_B* 2xwb_B* 2a74_C* 2ice_C* 2qki_C* 3l3o_F* 3nms_C* 3nsa_C* 3ohx_C* 3t4a_C 2ice_B* 3l3o_B* 3nms_B* ...
Probab=99.64 E-value=1.6e-15 Score=185.17 Aligned_cols=199 Identities=16% Similarity=0.164 Sum_probs=145.7
Q ss_pred HHHHHHHHHHHhccccCCCccccccCCCcchhhccccccccccccccCCccCcHHHHHHHHHhccCcCCccchhHHHHHH
Q 043885 515 NRLFEAVNVVLSLQNSSGGVASYERTRSYAWMEMLNPVENFGESIIDYQYVECTSSTIQCLKSFTKHYPKHRRREIEEFI 594 (765)
Q Consensus 515 ~~l~~av~~Lls~Qn~dGGw~~~e~~~~~~~le~l~p~e~f~~~~~d~~~~d~Ta~~l~aL~~~~~~~p~~r~~~i~~~I 594 (765)
+.|.+|+.+++++|++||||++|...++ ....|+.|+.+|..+.+... ..+..|
T Consensus 299 ~~i~~g~~rll~~Q~~DGsfs~w~~~~~---------------------s~wlTAyv~~~l~~a~~~~~-----v~~~~i 352 (915)
T 2hr0_B 299 ELIKKGYTQQLAFRQPSSAFAAFVKRAP---------------------STWLTAYVVKVFSLAVNLIA-----IDSQVL 352 (915)
T ss_dssp HHHHHHHHHHGGGCCTTTCCBSSSSSCB---------------------CHHHHHHHHHHHHTTTTTSC-----CCHHHH
T ss_pred HHHHHHHHHHHHhhcCCCCccccCCCCC---------------------cceehHHHHHHHHHhhhcCC-----CCHHHH
Confidence 4678899999999999999999975432 34469999999998864321 124789
Q ss_pred HHHHHHHHH-hcCCCCCCCCCCCCC--------------chhHHHHHHHHHHHcCCC-----CCChHHHHHHHHHHHhcc
Q 043885 595 AKGANFIES-IQRPDGWWYGSWGVC--------------FTYGTWFGIKGLVDSGRK-----YENSRSIRKACDFLLSKQ 654 (765)
Q Consensus 595 ~rAv~~L~~-~Q~~DGsW~g~wg~~--------------~~YgT~~al~aL~aaG~~-----~~~~~~i~rav~~Lls~Q 654 (765)
++|++||.+ .|.+||+|.+.|++. ..+.|++++.+|..+|.. ...++.|++|++||.++|
T Consensus 353 ~~al~~L~~~~Q~~dG~f~~~~~~~~~~m~gg~~~~~~~~~~ltAyvl~aL~~~g~~~~~~~~~~~~~i~~A~~yL~~~~ 432 (915)
T 2hr0_B 353 CGAVKWLILEKQKPDGVFQEDAPVIHQEMIGGLRNNNEKDMALTAFVLISLQEAKDICEEQVNSLPGSITKAGDFLEANY 432 (915)
T ss_dssp HHHHHHHHHHHBCTTSCBCCCSCCSSSCCCCSCCCCTTHHHHHHHHHHHHHHHHTTTSTTTCTTHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHhhccCCCccccCccccchhhcCCccCccccccccHHHHHHHHHhcccccccCcccchHHHHHHHHHHHHhh
Confidence 999999995 999999998877642 256689999999988653 124679999999999987
Q ss_pred cC-CCccccccccc-------------------c-ccc-cccCCCC-CCcHHHHHHHHHHHHHhCCCCCCcHHHHHHHHH
Q 043885 655 LD-SGGWGESYVSC-------------------V-DRV-YTNLEGN-KAHNVNTAWAMLALIEAGQAHRDPTPLHRAARV 711 (765)
Q Consensus 655 ~~-DGGWGes~~s~-------------------~-~~~-Y~~l~g~-~S~~~~TAwALlAL~~aG~~~~d~~~i~rav~~ 711 (765)
.. +++|+....++ . +.. |.. .++ .+++..|||||+||+.++.. +.+.++++|
T Consensus 433 ~~~~~~y~~a~layAL~l~g~~a~~~l~~L~~~~~~~~~w~~-~~~~~~~ve~TayaLlall~~~~~----~~~~~~v~w 507 (915)
T 2hr0_B 433 MNLQRSYTVAIAGYALAQMGRLKGPLLNKFLTTAKDKNRWED-PGKQLYNVEATSYALLALLQLKDF----DFVPPVVRW 507 (915)
T ss_dssp GGCCSHHHHHHHHHHHHTTTCCCHHHHHHHHHTSBTTTBCCC-SSCHHHHHHHHHHHHHHHHHTTCT----TTHHHHHHH
T ss_pred hccCCHHHHHHHHHHHHHcCChHHHHHHHHHhhccCCCCCCC-CCCCccchHHHHHHHHHHHhcCCh----hhHHHHHHH
Confidence 65 34343221110 0 011 211 011 12678999999999998854 248899999
Q ss_pred HHhcCcCCCCCCCCccccccCCccccccCCccchHHHHHHHHHHHhccC
Q 043885 712 LINSQMENGDFPQQEIMGSFTRNCMISYSAWRNIFPIWALGAFYNRVLL 760 (765)
Q Consensus 712 L~~~Q~~dG~w~~~~~~g~f~~~~~~~Y~~Yr~~fpl~ALg~y~~~~~~ 760 (765)
|.++|+.+|+|... .-.++.|+||++|..+...
T Consensus 508 L~~qq~~~Ggw~ST----------------QdT~~Al~AL~~y~~~~~~ 540 (915)
T 2hr0_B 508 LNEQRYYGGGYGST----------------QATFMVFQALAQYQKDAPD 540 (915)
T ss_dssp HHTCCCSSSSCCSH----------------HHHHHHHHHHHHHHHHCCC
T ss_pred HHhcccCCCCccch----------------hhHHHHHHHHHHHHHHcCc
Confidence 99999999999853 2367899999999876544
No 19
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=99.63 E-value=1.5e-15 Score=192.64 Aligned_cols=206 Identities=15% Similarity=0.147 Sum_probs=150.3
Q ss_pred HHHHHHHHHHHhccccCCCccccccCCCcchhhccccccccccccccCCccCcHHHHHHHHHhccCcCCccchhHHHHHH
Q 043885 515 NRLFEAVNVVLSLQNSSGGVASYERTRSYAWMEMLNPVENFGESIIDYQYVECTSSTIQCLKSFTKHYPKHRRREIEEFI 594 (765)
Q Consensus 515 ~~l~~av~~Lls~Qn~dGGw~~~e~~~~~~~le~l~p~e~f~~~~~d~~~~d~Ta~~l~aL~~~~~~~p~~r~~~i~~~I 594 (765)
..|.+|+++|+++|++||||++|...++. +++....|+.|+.+|+.+++..+- .++.+
T Consensus 983 ~~i~~g~~~ll~~q~~dGgf~~f~~~~~~-----------------~~~s~wlTAyv~~~l~~a~~~~~v-----~~~~l 1040 (1451)
T 4acq_A 983 GYLNTGYQRQLNYKHYDGSYSTFGERYGR-----------------NQGNTWLTAFVLKTFAQARAYIFI-----DEAHI 1040 (1451)
T ss_dssp HHHHHHHHHHGGGBCTTSCBCSSTTGGGC-----------------CCCCHHHHHHHHHHHHHHTTTSCC-----CTHHH
T ss_pred HHHHHHHHHHHhhcCCCCCeeeccCCCCC-----------------CCCchhHHHHHHHHHHHhhhhccc-----CHHHH
Confidence 34789999999999999999999643200 112345699999999988754321 14789
Q ss_pred HHHHHHHHHhcCCCCCCCC--CC-------CC-CchhHHHHHHHHHHHcCCCCCChHHHHHHHHHHHhc-----------
Q 043885 595 AKGANFIESIQRPDGWWYG--SW-------GV-CFTYGTWFGIKGLVDSGRKYENSRSIRKACDFLLSK----------- 653 (765)
Q Consensus 595 ~rAv~~L~~~Q~~DGsW~g--~w-------g~-~~~YgT~~al~aL~aaG~~~~~~~~i~rav~~Lls~----------- 653 (765)
++|++||.+.|++||+|.. .| |+ +.+|.|++++.+|..+|... .++.|++|++||.++
T Consensus 1041 ~~a~~wL~~~Q~~dG~f~~~g~~~~~~m~gg~~~~~~lTAyvl~aL~~~g~~~-~~~~i~~A~~~L~~~~~~~~~~~~~~ 1119 (1451)
T 4acq_A 1041 TQALIWLSQRQKDNGCFRSSGSLLNNAIKGGVEDEVTLSAYITIALLEIPLTV-THPVVRNALFCLESAWKTAQEGDHGS 1119 (1451)
T ss_dssp HHHHHHHHHTEETTTEECCCCCCSCGGGCCSCSCHHHHHHHHHHHHHHTTCCT-TCHHHHHHHHHHHHHHHHHTSSCSSS
T ss_pred HHHHHHHHhhcccCCcccccCcccchhhcCCCCCCccchHHHHHHHHHcCCCC-CCHHHHHHHHHHHHhhhhcccccccC
Confidence 9999999999999999984 44 22 46789999999999999864 678999999999865
Q ss_pred -------------------cc------------CCCc---cccccccccccc--cccCCCCCCcHHHHHHHHHHHHHhCC
Q 043885 654 -------------------QL------------DSGG---WGESYVSCVDRV--YTNLEGNKAHNVNTAWAMLALIEAGQ 697 (765)
Q Consensus 654 -------------------Q~------------~DGG---WGes~~s~~~~~--Y~~l~g~~S~~~~TAwALlAL~~aG~ 697 (765)
+. .+|| |++...++.... |.+ ......+..|||||+||+.++.
T Consensus 1120 ~~y~~AllAyAlal~g~~~~~~~~l~~L~~~a~~~~~~~~W~~~~~~~~~~~~~~~~-~~~s~~vE~TayaLLall~~~~ 1198 (1451)
T 4acq_A 1120 HVYTKALLAYAFALAGNQDKRKEVLKSLNEEAVKKDNSVHWERPQKPKAPVGHFYEP-QAPSAEVEMTSYVLLAYLTAQP 1198 (1451)
T ss_dssp THHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCBCSSCBCCCCCCCSSSCSSSTTCC-CTTGGGGTHHHHHHHHHHCCSS
T ss_pred ChHHHHHHHHHHHhcCChhHHHHHHHHHHHHhhccCCceecCCCCCCcccccccccc-CCchHHHHHHHHHHHHHhhccc
Confidence 11 2465 876543222111 111 0123467899999999999864
Q ss_pred CC--CCcHHHHHHHHHHHhcCcCCCCCCCCccccccCCccccccCCccchHHHHHHHHHHHhccC
Q 043885 698 AH--RDPTPLHRAARVLINSQMENGDFPQQEIMGSFTRNCMISYSAWRNIFPIWALGAFYNRVLL 760 (765)
Q Consensus 698 ~~--~d~~~i~rav~~L~~~Q~~dG~w~~~~~~g~f~~~~~~~Y~~Yr~~fpl~ALg~y~~~~~~ 760 (765)
.. .+.+.+.+.++||.++|+.+|+|.... -.++.|.||++|..+...
T Consensus 1199 ~~~~~d~~~a~~iv~WL~~qr~~~Ggf~STQ----------------dTv~aL~ALa~Y~~~~~~ 1247 (1451)
T 4acq_A 1199 APTSEDLTSATNIVKWITKQQNAQGGFSSTQ----------------DTVVALHALSKYGAATFT 1247 (1451)
T ss_dssp CCCHHHHHHHHTTHHHHTTCCCTTSCCSSHH----------------HHHHHHHHHHHHHHHHCC
T ss_pred cccccchhhHHHHHHHHHHcCCCCCCcccHH----------------HHHHHHHHHHHHHHhcCC
Confidence 20 123457889999999999999997532 367899999999887543
No 20
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1
Probab=99.62 E-value=2.6e-15 Score=164.01 Aligned_cols=208 Identities=14% Similarity=0.121 Sum_probs=133.0
Q ss_pred HHHHHHHHHHhccccCCCccccc-cCCCcchhh--c---------ccc------ccccccccccCCccCcHHHHHHHHHh
Q 043885 516 RLFEAVNVVLSLQNSSGGVASYE-RTRSYAWME--M---------LNP------VENFGESIIDYQYVECTSSTIQCLKS 577 (765)
Q Consensus 516 ~l~~av~~Lls~Qn~dGGw~~~e-~~~~~~~le--~---------l~p------~e~f~~~~~d~~~~d~Ta~~l~aL~~ 577 (765)
..++..+.|++.|.++|||...- .......-+ . .+| .+.+. ....+...+.|+.+|.+|..
T Consensus 82 ~A~~iAd~ll~~Q~~~GGW~kn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~T~DnddTa~vl~aL~r 160 (408)
T 1r76_A 82 AARHVADVIVSFQTPAGGWGKNQPRDGALRLPGQHYTGENVAKVKSGSNDLDAARDRDW-HYVGTIDNDATVTEIRFLAQ 160 (408)
T ss_dssp HHHHHHHHHHHHCCTTSCCCSSCCSSSCCCCTTCCSSCCCCCCCC---------CCCCC-SSSSBCGGGTTHHHHHHHHH
T ss_pred HHHHHHHHHHHccccCCCCCCccccccccchhhhhcccccccccccccccchhhccccc-CCCCCCCCchHHHHHHHHHH
Confidence 34778899999999999997421 111100000 0 000 00010 12234556789999999988
Q ss_pred ccCcCCccchhHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCchh---------HHHHHHHHHHHcCCCC-----------
Q 043885 578 FTKHYPKHRRREIEEFIAKGANFIESIQRPDGWWYGSWGVCFTY---------GTWFGIKGLVDSGRKY----------- 637 (765)
Q Consensus 578 ~~~~~p~~r~~~i~~~I~rAv~~L~~~Q~~DGsW~g~wg~~~~Y---------gT~~al~aL~aaG~~~----------- 637 (765)
+....++...+.++++|.||++||+++|.+||+|...+-.+..| .|..+|..|..++...
T Consensus 161 v~~~~t~~~~~~y~~Ai~Rgl~wlL~mQ~~nGGWpqFdpdn~~y~~~IpFnDDvt~rvle~L~~~~~~~~~~~~~~~~~~ 240 (408)
T 1r76_A 161 VVSQLAPEEAAPYRDAALKGIEYLLASQFPNGGWPQVWPLEGGYHDAITYNDDALVHVAELLSDIAAGRDGFGFVPPAIR 240 (408)
T ss_dssp HHHHSCGGGCHHHHHHHHHHHHHHHHHSCTTSCCBSBSSCCCGGGGSEECGGGHHHHHHHHHHHHHHTCTTCTTSCHHHH
T ss_pred HHhhccccccHHHHHHHHHHHHHHHHccCCCCCCcCcCccccccccCCCcCcHHHHHHHHHHHHHHhccCcccccchhhh
Confidence 64320111234578999999999999999999997655433222 5788888787655410
Q ss_pred -CChHHHHHHHHHHHhcccC-CCccccccccccccccccC-----CCCCCcHHHHHHHHHHHHHhCCCCC-CcHHHHHHH
Q 043885 638 -ENSRSIRKACDFLLSKQLD-SGGWGESYVSCVDRVYTNL-----EGNKAHNVNTAWAMLALIEAGQAHR-DPTPLHRAA 709 (765)
Q Consensus 638 -~~~~~i~rav~~Lls~Q~~-DGGWGes~~s~~~~~Y~~l-----~g~~S~~~~TAwALlAL~~aG~~~~-d~~~i~rav 709 (765)
...++++||++||++.|.+ ||.|-..+..+...++.|. |...=+..+|+++|++|+....... ..++|++|+
T Consensus 241 ~~~~~av~Rgi~~Ll~~Qe~~dGsw~rWg~qY~ygT~~Pa~aRsYE~psLs~~esa~il~~LM~~~~~~~~~~~aI~~Av 320 (408)
T 1r76_A 241 TRALEATNAAIHCIVETQVVQDGKRLGWGQQHDALTLRPTSARNFEPAALSSTESARILLFLMEIEAPSDAVKQAIRGGV 320 (408)
T ss_dssp HHHHHHHHHHHHHHHHHSCEETTEECCCCSEECTTTCSBCCCSTTCCSCEEHHHHHHHHHHHTTSSSCCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhhcccCCcccchhcccccccCcchhhhccCCccccHHHHHHHHHHHccCCCCCHHHHHHHHHHH
Confidence 2468999999999999999 9998654443333233220 1011257889999999999876420 123799999
Q ss_pred HHHHhcCcCCCCCCC
Q 043885 710 RVLINSQMENGDFPQ 724 (765)
Q Consensus 710 ~~L~~~Q~~dG~w~~ 724 (765)
+||.++|++||+|..
T Consensus 321 ~WL~s~Q~~dg~w~~ 335 (408)
T 1r76_A 321 AWLNTSVIRDRAWVK 335 (408)
T ss_dssp HHHHHSCCCC-----
T ss_pred HHHHHhhcCCCceee
Confidence 999999999999873
No 21
>1hzf_A Complement factor C4A; alpha-alpha 6 barrel, immune system; 2.30A {Homo sapiens} SCOP: a.102.4.4
Probab=99.60 E-value=2.7e-14 Score=157.16 Aligned_cols=238 Identities=19% Similarity=0.130 Sum_probs=155.1
Q ss_pred hheeccCCceeeccCCCchhHHHHHHHHHHHcCC----CC----cchHHHHHHHHHHHhhccccCCCCCCccccCCCCCC
Q 043885 402 YLWVAEDGMKMQAYNGSQLWDTAFAVHAILSTNL----VD----EYGSMLKKANNYIKTTQVRTKSFEDPSCWYRHEFQE 473 (765)
Q Consensus 402 ~l~~~~dG~~~q~~~gs~~WDTalai~AL~~ag~----~~----~~~~~l~kA~~~L~~~Q~~~~~~Gd~~~~~~~~~~G 473 (765)
+|..-+.|...|.. +..+-..++.++|.+++. .+ +....|++|+++|++.|..+ |+|..
T Consensus 46 ~L~~~P~Gc~EQ~~--s~~~P~~~v~~~l~~~~~w~~~~~~~~~~~~~~i~~g~~~ll~~Q~~d---Ggf~~-------- 112 (367)
T 1hzf_A 46 SLLRLPRGCGEQTM--IYLAPTLAASRYLDKTEQWSTLPPETKDHAVDLIQKGYMRIQQFRKAD---GSYAA-------- 112 (367)
T ss_dssp TTCCCCCSSHHHHH--HHHHHHHHHHHHHHHTTCSTTSCTTHHHHHHHHHHHHHHHHHTTBCTT---SCBCS--------
T ss_pred HHHhCCCCCHHHHH--HHHHHHHHHHHHHHHhhhcccCChhHHHHHHHHHHHHHHHHHhccCCC---CCeec--------
Confidence 33333555444433 344555677778777653 22 23567999999999999875 66532
Q ss_pred CCCCCCCCCCCCChhhhHHHHHHHHHhccccccccCCCCChHHHHHHHHHHHhccccCCCccccccCCCcchhhcccccc
Q 043885 474 GWPFSSLDNGWIATDTTAEGLNVSVLLSEMSYDLVGEAIPLNRLFEAVNVVLSLQNSSGGVASYERTRSYAWMEMLNPVE 553 (765)
Q Consensus 474 gW~fs~~~~~~pd~D~TA~aL~aL~~l~~~~~~~~g~~~~~~~l~~av~~Lls~Qn~dGGw~~~e~~~~~~~le~l~p~e 553 (765)
|. .+ .++.+.||.++++|..+.+. ..++.+.+.+|++||++.|++||+|..-....... +
T Consensus 113 -~~---~~--~~~~~lTa~v~~~l~~a~~~------~~v~~~~i~~a~~~L~~~Q~~dG~~~~~~~~~~~~----~---- 172 (367)
T 1hzf_A 113 -WL---SR--DSSTWLTAFVLKVLSLAQEQ------VGGSPEKLQETSNWLLSQQQADGSFQDPCPVLDRS----M---- 172 (367)
T ss_dssp -ST---TS--CCCHHHHHHHHHHHHHHGGG------TCCCHHHHHHHHHHHGGGBCTTSCBCCSSCCSCGG----G----
T ss_pred -cC---CC--CCcHHHHHHHHHHHHHHHHH------hCCCHHHHHHHHHHHHHhhccCCCccccccccccc----c----
Confidence 21 11 24668899999999887642 24568899999999999999999996321111000 0
Q ss_pred ccccccccCCccCcHHHHHHHHHhccCcCCccc----hhHHHHHHHHHHHHHHHh--c----------------------
Q 043885 554 NFGESIIDYQYVECTSSTIQCLKSFTKHYPKHR----RREIEEFIAKGANFIESI--Q---------------------- 605 (765)
Q Consensus 554 ~f~~~~~d~~~~d~Ta~~l~aL~~~~~~~p~~r----~~~i~~~I~rAv~~L~~~--Q---------------------- 605 (765)
-+....+.+.+..|+.++.+|...+..++..- .....+.|+||++||++. |
T Consensus 173 -~gg~~~~~~~~~lTA~vl~aL~~~g~~~~~~~~~~~~~~~~~~i~ra~~yL~~~~~~~~~~~y~~Al~ayAL~l~~~~~ 251 (367)
T 1hzf_A 173 -QGGLVGNDETVALTAFVTIALHHGLAVFQDEGAEPLKQRVEASISKASSFLGEKASAGLLGAHAAAITAYALTLTKAPA 251 (367)
T ss_dssp -GGGGSSTTHHHHHHHHHHHHHHHHHTTCCTTTTHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTTCCH
T ss_pred -cCCCCCCcccccchHHHHHHHHhhhccccccccchhhhhhHHHHHHHHHHHHHhhhcccCCHHHHHHHHHHHHhcCCcH
Confidence 01011123456789999999987654322100 023457899999999765 2
Q ss_pred ----------------CCCCCCCCCC---------------------C--CC-chhHHHHHHHHHHHcCCCCCChHHHHH
Q 043885 606 ----------------RPDGWWYGSW---------------------G--VC-FTYGTWFGIKGLVDSGRKYENSRSIRK 645 (765)
Q Consensus 606 ----------------~~DGsW~g~w---------------------g--~~-~~YgT~~al~aL~aaG~~~~~~~~i~r 645 (765)
..+|.|.+.+ + .. .+..|+++|++|.+.+.+ .+.+.+
T Consensus 252 ~~~~~~~~~L~~~a~~~~~~~~W~~~~~s~~~~~~~~~~~~~~~~~~~~~~s~~vE~TAyaLLall~~~~~---~~~~~~ 328 (367)
T 1hzf_A 252 DLRGVAHNNLMAMAQETGDNLYWGSVTGSQSNAVSPTPAPRNPSDPMPQAPALWIETTAYALLHLLLHEGK---AEMADQ 328 (367)
T ss_dssp HHHHHHHHHHHTTCEECSSCEECC------------------------CCCHHHHHHHHHHHHHHHHHTCS---SHHHHH
T ss_pred HHHHHHHHHHHHHhhhcCCCCccCCCCCcccccccccccccccccccCCCccchhHHHHHHHHHHHhccCc---hhhhHH
Confidence 2222222221 1 11 467899999999887543 468899
Q ss_pred HHHHHHhcccCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHHh
Q 043885 646 ACDFLLSKQLDSGGWGESYVSCVDRVYTNLEGNKAHNVNTAWAMLALIEA 695 (765)
Q Consensus 646 av~~Lls~Q~~DGGWGes~~s~~~~~Y~~l~g~~S~~~~TAwALlAL~~a 695 (765)
+++||.++||.+|||+.. -.|+.||.||...
T Consensus 329 iv~WL~~qrn~~Ggw~sT-------------------qdTvvAL~AL~~y 359 (367)
T 1hzf_A 329 ASAWLTRQGSFQGGFRST-------------------QDTVIALDALSAY 359 (367)
T ss_dssp HHHHHHHHTTSTTCSCSH-------------------HHHHHHHHHHHHH
T ss_pred HHHHHHhCcCCCCCcccH-------------------HHHHHHHHHHHHH
Confidence 999999999999999743 4699999999764
No 22
>1qqf_A Protein (complement C3DG); alpha-alpha barrel, immune system; 1.45A {Rattus norvegicus} SCOP: a.102.4.4 PDB: 1qsj_A 3d5r_A 2noj_A 2gox_A 3d5s_A 1c3d_A 2xqw_A
Probab=99.60 E-value=1.9e-14 Score=152.26 Aligned_cols=199 Identities=18% Similarity=0.084 Sum_probs=138.4
Q ss_pred hHHHHHHHHHHHhhccccCCCCCCccccCCCCCCCCCCCCCCCCCCChhhhHHHHHHHHHhccccccccCCCCChHHHHH
Q 043885 440 GSMLKKANNYIKTTQVRTKSFEDPSCWYRHEFQEGWPFSSLDNGWIATDTTAEGLNVSVLLSEMSYDLVGEAIPLNRLFE 519 (765)
Q Consensus 440 ~~~l~kA~~~L~~~Q~~~~~~Gd~~~~~~~~~~GgW~fs~~~~~~pd~D~TA~aL~aL~~l~~~~~~~~g~~~~~~~l~~ 519 (765)
...|+++++++++.|..+ |+|.. |+ ...+..+.||.++++|..+.+. + .++.+.+.+
T Consensus 37 ~~~i~~g~~~~l~~q~~d---Ggf~~---------f~-----~~~~s~wlTa~v~~~l~~a~~~-----~-~v~~~~i~~ 93 (277)
T 1qqf_A 37 LELIKKGYTQQLAFKQPI---SAYAA---------FN-----NRPPSTWLTAYVSRVFSLAANL-----I-AIDSQVLCG 93 (277)
T ss_dssp HHHHHHHHHHHHTTBCTT---SCBCS---------ST-----TSCCCHHHHHHHHHHHHHHTTT-----S-CCCHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCC---CCccc---------cC-----CCCccHHHHHHHHHHHHHHhhc-----C-CCCHHHHHH
Confidence 457899999999999875 66532 22 1246788999999999887531 1 467889999
Q ss_pred HHHHHHh-ccccCCCccccccCCCcchhhcccccccccccccc--CCccCcHHHHHHHHHhccCcCCccchhHHHHHHHH
Q 043885 520 AVNVVLS-LQNSSGGVASYERTRSYAWMEMLNPVENFGESIID--YQYVECTSSTIQCLKSFTKHYPKHRRREIEEFIAK 596 (765)
Q Consensus 520 av~~Lls-~Qn~dGGw~~~e~~~~~~~le~l~p~e~f~~~~~d--~~~~d~Ta~~l~aL~~~~~~~p~~r~~~i~~~I~r 596 (765)
|++||++ .|++||+|.....-... +..+.. .+ .+.+..|+.++.+|...+...++ ...+..+.|+|
T Consensus 94 a~~~L~~~~Q~~dG~f~~~~~~~~~---------~~~g~~-~~~~~~~~~lta~vl~aL~~~~~~~~~-~~~~~~~~i~~ 162 (277)
T 1qqf_A 94 AVKWLILEKQKPDGVFQEDGPVIHQ---------EMIGGF-RNTKEADVSLTAFVLIALQEARDICEG-QVNSLPGSINK 162 (277)
T ss_dssp HHHHHHHHHBCTTSCBCCSSCCSCG---------GGGGGG-GSCTTHHHHHHHHHHHHHHHHHHHHTT-TCTTHHHHHHH
T ss_pred HHHHHHHhccCCCCCccCCccccch---------hhcCCC-CCCccCccchHHHHHHHHHhhhhcccc-CCCchHHHHHH
Confidence 9999996 99999999643211100 000100 00 12345689999999876431000 00124578999
Q ss_pred HHHHHHHhcCC---------------------------------CCCCCCCCCCC--chhHHHHHHHHHHHcCCCCCChH
Q 043885 597 GANFIESIQRP---------------------------------DGWWYGSWGVC--FTYGTWFGIKGLVDSGRKYENSR 641 (765)
Q Consensus 597 Av~~L~~~Q~~---------------------------------DGsW~g~wg~~--~~YgT~~al~aL~aaG~~~~~~~ 641 (765)
|++||.+.|++ ||.|.+.++.. .++.|+++|.+|.+++.. +
T Consensus 163 A~~~L~~~~~~~~~~y~~a~~ayAl~l~g~~~~~~l~~l~~~~~~~~~w~~~~~~~~~ve~Ta~aLlal~~~~~~----~ 238 (277)
T 1qqf_A 163 AGEYLEASYLNLQRPYTVAIAGYALALMNKLEEPYLTKFLNTAKDRNRWEEPGQQLYNVEATSYALLALLLLKDF----D 238 (277)
T ss_dssp HHHHHHHHHTTCCCHHHHHHHHHHHHHTTCCCTTHHHHHHHHSBTTTBCCCTTCHHHHHHHHHHHHHHHHHTTCT----T
T ss_pred HHHHHHHHhccCCCHHHHHHHHHHHHHcCChHHHHHHHHHHhccCCCCCCCCCCccchhHHHHHHHHHHHhcCCh----h
Confidence 99999998764 44443333333 567899999999998753 4
Q ss_pred HHHHHHHHHHhcccCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHHh
Q 043885 642 SIRKACDFLLSKQLDSGGWGESYVSCVDRVYTNLEGNKAHNVNTAWAMLALIEA 695 (765)
Q Consensus 642 ~i~rav~~Lls~Q~~DGGWGes~~s~~~~~Y~~l~g~~S~~~~TAwALlAL~~a 695 (765)
.+.++++||.++|++||||+.. -.|+.||.||...
T Consensus 239 ~~~~~v~wL~~qq~~~Ggw~sT-------------------q~T~~aL~AL~~y 273 (277)
T 1qqf_A 239 SVPPVVRWLNDERYYGGGYGST-------------------QATFMVFQALAQY 273 (277)
T ss_dssp SHHHHHHHHHHCCCCTTSTTCH-------------------HHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHccCCCCCeecc-------------------hHHHHHHHHHHHH
Confidence 6889999999999999999642 4699999999763
No 23
>2wy7_A Complement C3D fragment; immune system, immune response, innate immunity, complement inflammatory response; 1.70A {Homo sapiens} PDB: 2wy8_A 3oed_A 3oxu_A 3rj3_A 1ghq_A* 1w2s_A
Probab=99.55 E-value=7.5e-14 Score=150.05 Aligned_cols=220 Identities=17% Similarity=0.091 Sum_probs=147.6
Q ss_pred hhHHHHHHHHHHHcCC----CC----cchHHHHHHHHHHHhhccccCCCCCCccccCCCCCCCCCCCCCCCCCCChhhhH
Q 043885 420 LWDTAFAVHAILSTNL----VD----EYGSMLKKANNYIKTTQVRTKSFEDPSCWYRHEFQEGWPFSSLDNGWIATDTTA 491 (765)
Q Consensus 420 ~WDTalai~AL~~ag~----~~----~~~~~l~kA~~~L~~~Q~~~~~~Gd~~~~~~~~~~GgW~fs~~~~~~pd~D~TA 491 (765)
.+-..++..-|.+++. .+ +....|+++++++++.|..+ |+|.. |+ ...+..+.||
T Consensus 25 ~~P~~~~~~yl~~~~~~~~~~~~~~~~~~~~i~~g~~~~l~~q~~d---Ggf~~---------f~-----~~~~s~wlTa 87 (310)
T 2wy7_A 25 MTPTVIAVHYLDETEQWEKFGLEKRQGALELIKKGYTQQLAFRQPS---SAFAA---------FV-----KRAPSTWLTA 87 (310)
T ss_dssp HHHHHHHHHHHHHHTCHHHHCTTHHHHHHHHHHHHHHHHHTTBCTT---SCBCS---------ST-----TSCCCHHHHH
T ss_pred HhHHHHHHHHHHHhhccccCChhHHHHHHHHHHHHHHHHHHhcCCC---CCccc---------CC-----CCCccHHHHH
Confidence 3445555555555552 22 23457899999999999865 66532 22 1236788999
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHHHHHHHh-ccccCCCccccccCCCcchhhcccccccccccccc--CCccCcH
Q 043885 492 EGLNVSVLLSEMSYDLVGEAIPLNRLFEAVNVVLS-LQNSSGGVASYERTRSYAWMEMLNPVENFGESIID--YQYVECT 568 (765)
Q Consensus 492 ~aL~aL~~l~~~~~~~~g~~~~~~~l~~av~~Lls-~Qn~dGGw~~~e~~~~~~~le~l~p~e~f~~~~~d--~~~~d~T 568 (765)
.++++|..+.+. + .++.+.+.+|++||++ .|++||+|......... +..+.. .+ .+.+..|
T Consensus 88 ~v~~~l~~a~~~-----~-~v~~~~i~~a~~~L~~~~Q~~dGsf~~~~~~~~~---------~~~g~~-~~~~~~~~~~t 151 (310)
T 2wy7_A 88 YVVKVFSLAVNL-----I-AIDSQVLCGAVKWLILEKQKPDGVFQEDAPVIHQ---------EMIGGL-RNNNEKDMALT 151 (310)
T ss_dssp HHHHHHHHHTTT-----S-CCCHHHHHHHHHHHHHHHBCTTSCBCCSSCCSCG---------GGGGGG-TTCSCHHHHHH
T ss_pred HHHHHHHHHHhc-----C-CCCHHHHHHHHHHHHHhhcCCCCccccCCCccCH---------hhcCCc-ccccccccchH
Confidence 999999887532 1 4678899999999996 99999999643221110 000100 00 1234568
Q ss_pred HHHHHHHHhccCcCCccchhHHHHHHHHHHHHHHHhcCC---------------------------------CCCCCCCC
Q 043885 569 SSTIQCLKSFTKHYPKHRRREIEEFIAKGANFIESIQRP---------------------------------DGWWYGSW 615 (765)
Q Consensus 569 a~~l~aL~~~~~~~p~~r~~~i~~~I~rAv~~L~~~Q~~---------------------------------DGsW~g~w 615 (765)
+.++.+|...+..... ...+..+.|+||++||.+.|++ +|.|.+.+
T Consensus 152 a~vl~aL~~~~~~~~~-~~~~~~~~i~~A~~~L~~~~~~~~~~y~~a~~ayAL~l~g~~~~~~l~~l~~~~~~~~~w~~~ 230 (310)
T 2wy7_A 152 AFVLISLQEAKDICEE-QVNSLPGSITKAGDFLEANYMNLQRSYTVAIAGYALAQMGRLKGPLLNKFLTTAKDKNRWEDP 230 (310)
T ss_dssp HHHHHHHHHHHHHHTT-TCTTHHHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHSBTTTBCCCS
T ss_pred HHHHHHHHhccccccc-CCcchHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHhcCCcHHHHHHHHHHhccCCCCCCCC
Confidence 9999999876431000 0012457899999999998764 34443333
Q ss_pred CCC--chhHHHHHHHHHHHcCCCCCChHHHHHHHHHHHhcccCCCccccccccccccccccCCCCCCcHHHHHHHHHHHH
Q 043885 616 GVC--FTYGTWFGIKGLVDSGRKYENSRSIRKACDFLLSKQLDSGGWGESYVSCVDRVYTNLEGNKAHNVNTAWAMLALI 693 (765)
Q Consensus 616 g~~--~~YgT~~al~aL~aaG~~~~~~~~i~rav~~Lls~Q~~DGGWGes~~s~~~~~Y~~l~g~~S~~~~TAwALlAL~ 693 (765)
+.. .++.|+++|.+|.+++.. +.+.++++||.++|++||||+.. -.|+.||.||.
T Consensus 231 ~~~~~~ve~Ta~aLlal~~~~~~----~~~~~~v~wL~~qq~~~Ggw~sT-------------------q~T~~aL~AL~ 287 (310)
T 2wy7_A 231 GKQLYNVEATSYALLALLQLKDF----DFVPPVVRWLNEQRYYGGGYGST-------------------QATFMVFQALA 287 (310)
T ss_dssp SCHHHHHHHHHHHHHHHHHHTCT----TTHHHHHHHHHHTTCCCCSTTCH-------------------HHHHHHHHHHH
T ss_pred CCcccchHHHHHHHHHHHhcCCh----hhHHHHHHHHHHccCCCCCeecc-------------------HHHHHHHHHHH
Confidence 332 567899999999998753 46889999999999999999642 46999999998
Q ss_pred HhC
Q 043885 694 EAG 696 (765)
Q Consensus 694 ~aG 696 (765)
...
T Consensus 288 ~y~ 290 (310)
T 2wy7_A 288 QYQ 290 (310)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 24
>3q7a_B Farnesyltransferase beta subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_B* 3q78_B* 3q79_B* 3q75_B* 3q7f_B* 3sfx_B* 3sfy_B*
Probab=99.50 E-value=9.1e-13 Score=148.21 Aligned_cols=222 Identities=12% Similarity=0.028 Sum_probs=146.3
Q ss_pred HHHHHHHHhhhheeccCCceeeccCCCchhHHHHHHHHHHHcCCCCcchHHHHHHHHHHHhhccccCCCCCCccccCCCC
Q 043885 392 YKHHLARIKDYLWVAEDGMKMQAYNGSQLWDTAFAVHAILSTNLVDEYGSMLKKANNYIKTTQVRTKSFEDPSCWYRHEF 471 (765)
Q Consensus 392 ~~~~l~~l~~~l~~~~dG~~~q~~~gs~~WDTalai~AL~~ag~~~~~~~~l~kA~~~L~~~Q~~~~~~Gd~~~~~~~~~ 471 (765)
.++|++.+.+.+ ..-...++..+.+..|=.=+++.||.-.|..-+ ....+++++||++.|..+ |+|.
T Consensus 63 ~~~Hi~yl~~~L--~~LP~~y~~~Dasr~wl~Yw~l~aL~LLg~~ld-~~~~~~~I~~Ils~Q~~d---GGFg------- 129 (520)
T 3q7a_B 63 KQEHTQFLASSF--FQLPGKFVSLDASRPWLVFWTVHSLDLLGVALD-QGTKDRVVSTLLHFLSPK---GGFG------- 129 (520)
T ss_dssp HHHHHHHHHHHH--SCBCGGGGGGGGGHHHHHHHHHHHHHHHTCCCC-HHHHHHHHHHHHTTBCTT---SSBC-------
T ss_pred HHHHHHHHHHHh--hhCChhhhhcccchHHHHHHHHHHHHHhCCCCC-hHHHHHHHHHHHHHcCCC---CCCC-------
Confidence 678999888875 222345556667889999999999988885433 456889999999999864 5542
Q ss_pred CCCCCCCCCCCCCCChhhhHHHHHHHHHhccccccccCCCCChHH--HHHHHHHHHhccccCCCccccccCCCcchhhcc
Q 043885 472 QEGWPFSSLDNGWIATDTTAEGLNVSVLLSEMSYDLVGEAIPLNR--LFEAVNVVLSLQNSSGGVASYERTRSYAWMEML 549 (765)
Q Consensus 472 ~GgW~fs~~~~~~pd~D~TA~aL~aL~~l~~~~~~~~g~~~~~~~--l~~av~~Lls~Qn~dGGw~~~e~~~~~~~le~l 549 (765)
|++.. ...|.+-||..||.+|..+....+ +.....-. .+++++||.++|++||||..-. |
T Consensus 130 --g~p~~---~~~~hla~TysAV~aL~ilg~~~p---~~~~~~Id~~r~k~v~fL~slQ~~DGSF~g~~------w---- 191 (520)
T 3q7a_B 130 --GGPAN---SQIPHLLPTYASVCSLAIAGNDSS---TGGWKDLAAARQSIYEFFMRCKRPDGGFVVCE------G---- 191 (520)
T ss_dssp --SSCTT---TSCCCHHHHHHHHHHHHHHCBSST---TSBHHHHHHTHHHHHHHHHHHBCTTSCBBSST------T----
T ss_pred --CCCCC---CCCCcHHHHHHHHHHHHHhCcccc---chhhhhhhhHHHHHHHHHHHHhCCCCCEecCC------C----
Confidence 23211 235889999999999998864211 01111112 5678999999999999996311 1
Q ss_pred ccccccccccccCCccCcHHHHHHHHHhccCcCCccchhHHHHHHHHHHHHHHHhcCCCCCCCCC---------------
Q 043885 550 NPVENFGESIIDYQYVECTSSTIQCLKSFTKHYPKHRRREIEEFIAKGANFIESIQRPDGWWYGS--------------- 614 (765)
Q Consensus 550 ~p~e~f~~~~~d~~~~d~Ta~~l~aL~~~~~~~p~~r~~~i~~~I~rAv~~L~~~Q~~DGsW~g~--------------- 614 (765)
+. .++-.|-.++.+|.+++... ...++|+++||++.|+.||+|...
T Consensus 192 ------Ge-----~Dir~TY~Al~~L~lLg~~~--------~~~v~kav~fI~scQn~DGGfGe~s~~~~~~~~~~~~~~ 252 (520)
T 3q7a_B 192 ------GE-----VDVRGTYCLLVVATLLDIIT--------PELLHNVDKFVSACQTYEGGFACASFPFPSVVPSTSAFP 252 (520)
T ss_dssp ------CC-----BCHHHHHHHHHHHHHHTCCC--------HHHHTTHHHHHHTTBCTTSSBCSCEEEEC----------
T ss_pred ------CC-----chHHHHHHHHHHHHHcCCCC--------hHHHHHHHHHHHHhcCCCCCccCcccccccccccccccc
Confidence 10 12233555666666665421 256999999999999999999761
Q ss_pred ---------CCCCchhHHHHHHHHHHHcCCCCC----ChHHHHHHHHHHHhccc---CCCccccc
Q 043885 615 ---------WGVCFTYGTWFGIKGLVDSGRKYE----NSRSIRKACDFLLSKQL---DSGGWGES 663 (765)
Q Consensus 615 ---------wg~~~~YgT~~al~aL~aaG~~~~----~~~~i~rav~~Lls~Q~---~DGGWGes 663 (765)
.+..+.=-|..+|.+|.-.|.... ....+.+.++||..+|. ++||+...
T Consensus 253 ~~rp~~~~Pg~EaHgGyTfCalAaL~lL~~l~~~~~~~~~d~~~l~~WL~~RQ~~~~e~GGF~GR 317 (520)
T 3q7a_B 253 TSEPSCRVSMAEAHGGYTSCSLNSHFLLTSVPLPSFPLSIDANAALRWTVLQQGEPIEGGGFRGR 317 (520)
T ss_dssp --CCSEEEECSCCCHHHHHHHHHHHHHHHTSCCTTCSCCCCHHHHHHHHHHTBCCGGGTTCBBSS
T ss_pred ccccccCCCCCccchhHHHHHHHHHHHhccccccccccccCHHHHHHHHHHhCCcccCCCcccCC
Confidence 222222124445555654444210 12346789999999996 56999543
No 25
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A*
Probab=99.33 E-value=1.8e-12 Score=137.99 Aligned_cols=183 Identities=15% Similarity=0.134 Sum_probs=118.3
Q ss_pred HHHHHhccccCCCccccccCCCcchhhccccccccccccccCCccCcHHHHHHHHHhccCcCCccchhHHHHHHHHHHHH
Q 043885 521 VNVVLSLQNSSGGVASYERTRSYAWMEMLNPVENFGESIIDYQYVECTSSTIQCLKSFTKHYPKHRRREIEEFIAKGANF 600 (765)
Q Consensus 521 v~~Lls~Qn~dGGw~~~e~~~~~~~le~l~p~e~f~~~~~d~~~~d~Ta~~l~aL~~~~~~~p~~r~~~i~~~I~rAv~~ 600 (765)
.+.|++.|.++|||+-.- +-+.. ..+. +.....++..+.|+.+|.+|..+... ...+.++++|.||++|
T Consensus 37 Ad~~l~~Q~~~GGW~kn~-d~~~~---~~~~----~~~~~~t~DnddTa~vl~~Larv~~~---~~~~~y~~Ai~Rgl~w 105 (332)
T 1gxm_A 37 ADVVLSYQQNNGGWPKNL-DYNSV---GNGG----GGNESGTIDNGATITEMVFLAEVYKS---GGNTKYRDAVRKAANF 105 (332)
T ss_dssp HHHHHHTCCTTSCCCSCC-CTTTC---CCCC----CCCSCEECGGGTTHHHHHHHHHHHHH---HCCHHHHHHHHHHHHH
T ss_pred HHHHHHcCcCCCCCCcce-ecccc---cccC----CCCCCCCccCccHHHHHHHHHHHhcc---ccchHHHHHHHHHHHH
Confidence 788999999999997421 11100 0110 11112245567899999999876431 1234578999999999
Q ss_pred HHHhcCCCCCCCCCCCCCc------hh---HHHHHHHHHHHcCCC---C-----------CChHHHHHHHHHHHhcccCC
Q 043885 601 IESIQRPDGWWYGSWGVCF------TY---GTWFGIKGLVDSGRK---Y-----------ENSRSIRKACDFLLSKQLDS 657 (765)
Q Consensus 601 L~~~Q~~DGsW~g~wg~~~------~Y---gT~~al~aL~aaG~~---~-----------~~~~~i~rav~~Lls~Q~~D 657 (765)
|+++|.+||+|...+-.+. +| .|..+|..|..++.. + ...++++||++||++.|.+|
T Consensus 106 lL~mQ~~nGGWpqFdpd~~~Yl~~IpFnDDvtarvLelL~~~~~~~~~~~~~~~~~~~~~~~~~av~Rgid~Llk~Qe~d 185 (332)
T 1gxm_A 106 LVNSQYSTGALPQFYPLKGGYSDHATFNDNGMAYALTVLDFAANKRAPFDTDVFSDNDRTRFKTAVTKGTDYILKAQWKQ 185 (332)
T ss_dssp HHHHCCTTSCCBSEESCCSGGGGSEECGGGHHHHHHHHHHHHHTTCTTSCSTTSCHHHHHHHHHHHHHHHHHHHHHSCEE
T ss_pred HHhccCCCCCccccCCCcccccccCCcchHHHHHHHHHHHHHHhccCCccccccccchhhhhHHHHHHHHHHHHHhhCcc
Confidence 9999999999975443222 22 588898888876431 1 24689999999999999999
Q ss_pred Ccc-ccccccccccccccCCC----CCCcH-HHHHHHHHHHHHhCCCCCCc---HHHHHHHHHHHhcCc
Q 043885 658 GGW-GESYVSCVDRVYTNLEG----NKAHN-VNTAWAMLALIEAGQAHRDP---TPLHRAARVLINSQM 717 (765)
Q Consensus 658 GGW-Ges~~s~~~~~Y~~l~g----~~S~~-~~TAwALlAL~~aG~~~~d~---~~i~rav~~L~~~Q~ 717 (765)
||| |..+..+...++.|..+ -+|-. ..++-.|..|+.. +. ++ .+|++|++||.++|.
T Consensus 186 ggw~g~Wg~qydygT~~Pa~ARayE~psL~~~es~giv~~LM~~--~~-~~~v~~aI~~Av~WL~~~q~ 251 (332)
T 1gxm_A 186 NGVLTVWCAQHGALDYQPKKARAYELESLSGSESVGVLAFLMTQ--PQ-TAEIEQAVRAGVAWFNSPRT 251 (332)
T ss_dssp TTEECCCCSEECTTTCCBCCCSTTCCSSEETTTHHHHHHHHTTS--CC-CHHHHHHHHHHHHHHTCTTT
T ss_pred CCCcCeeccccccccccccccccccccchhHHHHHHHHHHhccC--CC-CHHHHHHHHHHHHHHHhccc
Confidence 998 55555444334433111 01212 2233344445443 32 34 269999999999999
No 26
>2hr0_B Complement C3 alpha' chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2icf_B* 2wii_B* 2win_B* 3g6j_B 3l5n_B* 2a73_B* 2i07_B* 2xwj_B* 2xwb_B* 2a74_C* 2ice_C* 2qki_C* 3l3o_F* 3nms_C* 3nsa_C* 3ohx_C* 3t4a_C 2ice_B* 3l3o_B* 3nms_B* ...
Probab=99.25 E-value=1.4e-10 Score=141.84 Aligned_cols=222 Identities=18% Similarity=0.088 Sum_probs=146.7
Q ss_pred CchhHHHHHHHHHHHcCC----CCc----chHHHHHHHHHHHhhccccCCCCCCccccCCCCCCCCCCCCCCCCCCChhh
Q 043885 418 SQLWDTAFAVHAILSTNL----VDE----YGSMLKKANNYIKTTQVRTKSFEDPSCWYRHEFQEGWPFSSLDNGWIATDT 489 (765)
Q Consensus 418 s~~WDTalai~AL~~ag~----~~~----~~~~l~kA~~~L~~~Q~~~~~~Gd~~~~~~~~~~GgW~fs~~~~~~pd~D~ 489 (765)
|..+-..++...|.+++. .++ ....|++++++|+..|..+ |+|+. |+ ...++.+.
T Consensus 268 s~~~P~l~~~~yL~~~~q~~~~~~~~~~~a~~~i~~g~~rll~~Q~~D---Gsfs~---------w~-----~~~~s~wl 330 (915)
T 2hr0_B 268 IGMTPTVIAVHYLDETEQWEKFGLEKRQGALELIKKGYTQQLAFRQPS---SAFAA---------FV-----KRAPSTWL 330 (915)
T ss_dssp GGTHHHHHHHHHHHHTTCHHHHCTHHHHHHHHHHHHHHHHHGGGCCTT---TCCBS---------SS-----SSCBCHHH
T ss_pred HhhhhHHHHHHHHHhhcccccCCHHHHHHHHHHHHHHHHHHHHhhcCC---CCccc---------cC-----CCCCccee
Confidence 445556666666666652 122 2346788899999999765 66642 22 12367788
Q ss_pred hHHHHHHHHHhccccccccCCCCChHHHHHHHHHHHh-ccccCCCccccccCCCcchhhcccccccccccccc-CCccCc
Q 043885 490 TAEGLNVSVLLSEMSYDLVGEAIPLNRLFEAVNVVLS-LQNSSGGVASYERTRSYAWMEMLNPVENFGESIID-YQYVEC 567 (765)
Q Consensus 490 TA~aL~aL~~l~~~~~~~~g~~~~~~~l~~av~~Lls-~Qn~dGGw~~~e~~~~~~~le~l~p~e~f~~~~~d-~~~~d~ 567 (765)
||.++++|..+.. .+ .++.+.+.+|++||++ .|++||+|.....-... +.-+..-.. .+....
T Consensus 331 TAyv~~~l~~a~~-----~~-~v~~~~i~~al~~L~~~~Q~~dG~f~~~~~~~~~---------~m~gg~~~~~~~~~~l 395 (915)
T 2hr0_B 331 TAYVVKVFSLAVN-----LI-AIDSQVLCGAVKWLILEKQKPDGVFQEDAPVIHQ---------EMIGGLRNNNEKDMAL 395 (915)
T ss_dssp HHHHHHHHHTTTT-----TS-CCCHHHHHHHHHHHHHHHBCTTSCBCCCSCCSSS---------CCCCSCCCCTTHHHHH
T ss_pred hHHHHHHHHHhhh-----cC-CCCHHHHHHHHHHHHHhhccCCCccccCccccch---------hhcCCccCcccccccc
Confidence 9999999987753 12 4678999999999995 99999999642211000 000000000 123456
Q ss_pred HHHHHHHHHhccCcCCccchhHHHHHHHHHHHHHHHhcCC---------------------------------CCCCCCC
Q 043885 568 TSSTIQCLKSFTKHYPKHRRREIEEFIAKGANFIESIQRP---------------------------------DGWWYGS 614 (765)
Q Consensus 568 Ta~~l~aL~~~~~~~p~~r~~~i~~~I~rAv~~L~~~Q~~---------------------------------DGsW~g~ 614 (765)
|+.++.+|...++...+ ......+.|++|++||.+.+.. +|.|+..
T Consensus 396 tAyvl~aL~~~g~~~~~-~~~~~~~~i~~A~~yL~~~~~~~~~~y~~a~layAL~l~g~~a~~~l~~L~~~~~~~~~w~~ 474 (915)
T 2hr0_B 396 TAFVLISLQEAKDICEE-QVNSLPGSITKAGDFLEANYMNLQRSYTVAIAGYALAQMGRLKGPLLNKFLTTAKDKNRWED 474 (915)
T ss_dssp HHHHHHHHHHHTTTSTT-TCTTHHHHHHHHHHHHHHHGGGCCSHHHHHHHHHHHHTTTCCCHHHHHHHHHTSBTTTBCCC
T ss_pred HHHHHHHHHhccccccc-CcccchHHHHHHHHHHHHhhhccCCHHHHHHHHHHHHHcCChHHHHHHHHHhhccCCCCCCC
Confidence 89999999877542100 0112467899999999887644 3443233
Q ss_pred CCCC--chhHHHHHHHHHHHcCCCCCChHHHHHHHHHHHhcccCCCccccccccccccccccCCCCCCcHHHHHHHHHHH
Q 043885 615 WGVC--FTYGTWFGIKGLVDSGRKYENSRSIRKACDFLLSKQLDSGGWGESYVSCVDRVYTNLEGNKAHNVNTAWAMLAL 692 (765)
Q Consensus 615 wg~~--~~YgT~~al~aL~aaG~~~~~~~~i~rav~~Lls~Q~~DGGWGes~~s~~~~~Y~~l~g~~S~~~~TAwALlAL 692 (765)
++.. .+..|+++|.+|.+++.. ..+.++++||++.|+.+|||+.. -.|+.||.||
T Consensus 475 ~~~~~~~ve~TayaLlall~~~~~----~~~~~~v~wL~~qq~~~Ggw~ST-------------------QdT~~Al~AL 531 (915)
T 2hr0_B 475 PGKQLYNVEATSYALLALLQLKDF----DFVPPVVRWLNEQRYYGGGYGST-------------------QATFMVFQAL 531 (915)
T ss_dssp SSCHHHHHHHHHHHHHHHHHTTCT----TTHHHHHHHHHTCCCSSSSCCSH-------------------HHHHHHHHHH
T ss_pred CCCCccchHHHHHHHHHHHhcCCh----hhHHHHHHHHHhcccCCCCccch-------------------hhHHHHHHHH
Confidence 3322 466899999999998754 35789999999999999999642 3599999999
Q ss_pred HHh
Q 043885 693 IEA 695 (765)
Q Consensus 693 ~~a 695 (765)
...
T Consensus 532 ~~y 534 (915)
T 2hr0_B 532 AQY 534 (915)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 27
>3dra_B Geranylgeranyltransferase type I beta subunit; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.16 E-value=3.8e-10 Score=123.96 Aligned_cols=171 Identities=15% Similarity=0.048 Sum_probs=113.4
Q ss_pred ChHHHHHHHHHHHhccccC----CCccccccCCCcchhhccccccccccccccCCccCcHHHHHHHHHhccCcCCccchh
Q 043885 513 PLNRLFEAVNVVLSLQNSS----GGVASYERTRSYAWMEMLNPVENFGESIIDYQYVECTSSTIQCLKSFTKHYPKHRRR 588 (765)
Q Consensus 513 ~~~~l~~av~~Lls~Qn~d----GGw~~~e~~~~~~~le~l~p~e~f~~~~~d~~~~d~Ta~~l~aL~~~~~~~p~~r~~ 588 (765)
..+..++-++||.++|.++ |||+...... +...-.+.+..-.|-.+|.+|+.++.. .. +
T Consensus 51 ~~~~~~~~i~~i~~~q~~~~~~~gGF~g~~~~~-------------~~g~~~~~~hl~~Ty~Al~~L~ilg~~--~~--~ 113 (390)
T 3dra_B 51 TNQELIYYRNFIINQFMIENNQIISFRSTHYFQ-------------KTNQKYDCPNLSSTLFALYNLLILKSP--YH--T 113 (390)
T ss_dssp CHHHHHHHHHHHHHHHEEECSSCEEECSSGGGG-------------GSCTTTSCCBHHHHHHHHHHHHHTTCC--GG--G
T ss_pred chHHHHHHHHHHHHHhccccCCCCCcCCCccCC-------------CCCCccCcccHHHHHHHHHHHHHhCch--hh--c
Confidence 3455667799999998763 7886432100 000011345566688889999888753 11 0
Q ss_pred HHHHHHHHHHHHHHHhcC---C-CCCCC-----C-------CCCCCchhHHHHHHHHHHHcCCCCC-----------ChH
Q 043885 589 EIEEFIAKGANFIESIQR---P-DGWWY-----G-------SWGVCFTYGTWFGIKGLVDSGRKYE-----------NSR 641 (765)
Q Consensus 589 ~i~~~I~rAv~~L~~~Q~---~-DGsW~-----g-------~wg~~~~YgT~~al~aL~aaG~~~~-----------~~~ 641 (765)
.++ .++.++||.+.|+ + ||||. + .+|...+-.+..|+..+...+.... ...
T Consensus 114 ~vd--r~~i~~~l~~lQ~~~~~~dGsF~~~~~~~~~dg~~~~~ge~D~R~~YcA~~i~~lL~~~~~~~~~~~~~~~~~~i 191 (390)
T 3dra_B 114 IIN--RKKIMNFLCKCQVKDGINKGGFVPTLYYNEENGDYKQYGEPDLRVCYMALLIRHLMKYDDNNNNNNREDSNETDI 191 (390)
T ss_dssp TCC--HHHHHHHHHHHBCCSSTTTTCBCSEEEEETTTTEEEEESCCCHHHHHHHHHHHHHTTCC-------------CCC
T ss_pred ccc--HHHHHHHHHHHhCCCCCCCCceeeeccccccccccccCCcchHHHHHHHHHHHHHhCCCcccccccccccccccc
Confidence 111 3566799999998 6 89997 2 1554433333334333333333310 023
Q ss_pred HHHHHHHHHHhcccCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHhcCc
Q 043885 642 SIRKACDFLLSKQLDSGGWGESYVSCVDRVYTNLEGNKAHNVNTAWAMLALIEAGQAHRDPTPLHRAARVLINSQM 717 (765)
Q Consensus 642 ~i~rav~~Lls~Q~~DGGWGes~~s~~~~~Y~~l~g~~S~~~~TAwALlAL~~aG~~~~d~~~i~rav~~L~~~Q~ 717 (765)
.+.++++||+++|+.|||+|.+. +.+||.-.|.+||.+|...+... ..+++-++||.++|.
T Consensus 192 d~~~~~~~I~~cq~ydGGfg~~p------------~~EsH~G~TfCalaaL~lL~~~~---~d~~~l~~WL~~RQ~ 252 (390)
T 3dra_B 192 DLISLQQFILDRININGGFSSTI------------MDESHLGFTFCAIASLKLLNYPL---EKLKSTKEWLIHRQV 252 (390)
T ss_dssp CHHHHHHHHHTTBCTTSCBCSST------------TSCCCHHHHHHHHHHHHHTTCCG---GGCHHHHHHHHTTBC
T ss_pred cHHHHHHHHHHhcCCCCCcCCCC------------CcccccchhHHHHHHHHHhCccc---ccHHHHHHHHHHcCc
Confidence 47899999999999999999862 67899999999999999998652 247889999999997
No 28
>3dra_B Geranylgeranyltransferase type I beta subunit; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.11 E-value=7.5e-09 Score=113.72 Aligned_cols=310 Identities=14% Similarity=0.104 Sum_probs=180.5
Q ss_pred HHHHHHHHhhhheeccCCceeeccCCCchhHHHHHHHHHHHcCCCCcchHHHHHHHHHHHhhccccC-CCCCCccccCCC
Q 043885 392 YKHHLARIKDYLWVAEDGMKMQAYNGSQLWDTAFAVHAILSTNLVDEYGSMLKKANNYIKTTQVRTK-SFEDPSCWYRHE 470 (765)
Q Consensus 392 ~~~~l~~l~~~l~~~~dG~~~q~~~gs~~WDTalai~AL~~ag~~~~~~~~l~kA~~~L~~~Q~~~~-~~Gd~~~~~~~~ 470 (765)
.++|++.+.+.|-. =....+..+.+.+|=+=|++.||.-.|..+-.....++.++||.+.|+.++ ..|+|.
T Consensus 6 ~~kHiky~~~~L~~--Lp~~~~s~D~~R~~l~Yw~l~~L~lLg~~~~~~~~~~~~i~~i~~~q~~~~~~~gGF~------ 77 (390)
T 3dra_B 6 INKHEKFFNRCLIG--LPSTAQSEDSNKLAIIYFCLHGLQLIQKFQFTNQELIYYRNFIINQFMIENNQIISFR------ 77 (390)
T ss_dssp HHHHHHHHHHHHHC--CCGGGGGGTTCHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHEEECSSCEEEC------
T ss_pred HHHHHHHHHHHHHh--CCcchhhcchhhHHHHHHHHHHHHHhCCCccchHHHHHHHHHHHHHhccccCCCCCcC------
Confidence 56788777664421 123445556788999999999999888652123456778999999998642 123332
Q ss_pred CCCCCCC-CCCCC--CCCChhhhHHHHHHHHHhccccccccCCCCChHHHHHHHHHHHhccc---c-CCCccccc--cCC
Q 043885 471 FQEGWPF-SSLDN--GWIATDTTAEGLNVSVLLSEMSYDLVGEAIPLNRLFEAVNVVLSLQN---S-SGGVASYE--RTR 541 (765)
Q Consensus 471 ~~GgW~f-s~~~~--~~pd~D~TA~aL~aL~~l~~~~~~~~g~~~~~~~l~~av~~Lls~Qn---~-dGGw~~~e--~~~ 541 (765)
|-++ ....+ ..|..-.|=.||.+|..+... .=..++. .+-++||.++|+ + ||||.... ...
T Consensus 78 ---g~~~~~~~g~~~~~~hl~~Ty~Al~~L~ilg~~----~~~~vdr---~~i~~~l~~lQ~~~~~~dGsF~~~~~~~~~ 147 (390)
T 3dra_B 78 ---STHYFQKTNQKYDCPNLSSTLFALYNLLILKSP----YHTIINR---KKIMNFLCKCQVKDGINKGGFVPTLYYNEE 147 (390)
T ss_dssp ---SSGGGGGSCTTTSCCBHHHHHHHHHHHHHTTCC----GGGTCCH---HHHHHHHHHHBCCSSTTTTCBCSEEEEETT
T ss_pred ---CCccCCCCCCccCcccHHHHHHHHHHHHHhCch----hhccccH---HHHHHHHHHHhCCCCCCCCceeeecccccc
Confidence 1111 00111 236777788888888777421 0012333 345789999998 6 89998432 000
Q ss_pred CcchhhccccccccccccccCCccCcHHHHHHHHHhccCcC--C-ccchhHH--HHHHHHHHHHHHHhcCCCCCCCCCCC
Q 043885 542 SYAWMEMLNPVENFGESIIDYQYVECTSSTIQCLKSFTKHY--P-KHRRREI--EEFIAKGANFIESIQRPDGWWYGSWG 616 (765)
Q Consensus 542 ~~~~le~l~p~e~f~~~~~d~~~~d~Ta~~l~aL~~~~~~~--p-~~r~~~i--~~~I~rAv~~L~~~Q~~DGsW~g~wg 616 (765)
+..+ +.+++ .|-..+.|...+ +.+++... | ..+..+. ..-++++++||.+.|+.||++.+.-+
T Consensus 148 dg~~-------~~~ge--~D~R~~YcA~~i---~~lL~~~~~~~~~~~~~~~~~~id~~~~~~~I~~cq~ydGGfg~~p~ 215 (390)
T 3dra_B 148 NGDY-------KQYGE--PDLRVCYMALLI---RHLMKYDDNNNNNNREDSNETDIDLISLQQFILDRININGGFSSTIM 215 (390)
T ss_dssp TTEE-------EEESC--CCHHHHHHHHHH---HHHTTCC-------------CCCCHHHHHHHHHTTBCTTSCBCSSTT
T ss_pred cccc-------ccCCc--chHHHHHHHHHH---HHHhCCCcccccccccccccccccHHHHHHHHHHhcCCCCCcCCCCC
Confidence 0000 00111 111122222222 22232221 0 0000000 01278999999999999999975433
Q ss_pred -CCchhHHHHHHHHHHHcCCCCCChHHHHHHHHHHHhccc----------------------------CCCccccccccc
Q 043885 617 -VCFTYGTWFGIKGLVDSGRKYENSRSIRKACDFLLSKQL----------------------------DSGGWGESYVSC 667 (765)
Q Consensus 617 -~~~~YgT~~al~aL~aaG~~~~~~~~i~rav~~Lls~Q~----------------------------~DGGWGes~~s~ 667 (765)
....--|..||.+|.-.|... ..+.+.++||.++|. ++||+....
T Consensus 216 ~EsH~G~TfCalaaL~lL~~~~---~d~~~l~~WL~~RQ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GGFnGR~--- 289 (390)
T 3dra_B 216 DESHLGFTFCAIASLKLLNYPL---EKLKSTKEWLIHRQVDYPENLYPKDGNGDGNGNGDNYEYYRNIDIGGFNGRE--- 289 (390)
T ss_dssp SCCCHHHHHHHHHHHHHTTCCG---GGCHHHHHHHHTTBCCCCTTTCC------------CCTTCCGGGTTSBBSST---
T ss_pred cccccchhHHHHHHHHHhCccc---ccHHHHHHHHHHcCccccccccccccccccccccccccccccccCCCccCCC---
Confidence 233223666787888777662 356789999999997 468885431
Q ss_pred cccccccCCCCCCcHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHhcC-cC-CCCCCCCccccccCCccccccCCccch
Q 043885 668 VDRVYTNLEGNKAHNVNTAWAMLALIEAGQAHRDPTPLHRAARVLINSQ-ME-NGDFPQQEIMGSFTRNCMISYSAWRNI 745 (765)
Q Consensus 668 ~~~~Y~~l~g~~S~~~~TAwALlAL~~aG~~~~d~~~i~rav~~L~~~Q-~~-dG~w~~~~~~g~f~~~~~~~Y~~Yr~~ 745 (765)
++..++--+.|++-+|...+....+.-..++..+||+++| .+ .|+|.... |..| ..|-.+
T Consensus 290 ---------nKl~D~CYS~Wv~~sL~iL~~~~~~l~d~~~l~~yiL~c~Q~~~~GGf~d~P--g~~p-------D~yHT~ 351 (390)
T 3dra_B 290 ---------NKLSDTCYSWWCTGSLYNIDVNFIKLVDLNKAEDYLLNKTQNQLFGGFGRDP--DSTP-------DPMHSY 351 (390)
T ss_dssp ---------TCCBCTHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHTTBCTTTCSBCSST--TSCC-------CHHHHH
T ss_pred ---------CCccchhHHHHHHHHHHHhccccccccCHHHHHHHHHHhccCCCCCCcCCCC--CCCC-------chHHHH
Confidence 3446777899999999888731001112567789999975 44 89987642 3222 234566
Q ss_pred HHHHHHHHHH
Q 043885 746 FPIWALGAFY 755 (765)
Q Consensus 746 fpl~ALg~y~ 755 (765)
|-|-+|+-..
T Consensus 352 ~gLagLsl~~ 361 (390)
T 3dra_B 352 LALASLSLWN 361 (390)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHcC
Confidence 8888887654
No 29
>4fxk_B Complement C4-A alpha chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_B*
Probab=99.10 E-value=2.4e-08 Score=119.87 Aligned_cols=280 Identities=18% Similarity=0.114 Sum_probs=174.6
Q ss_pred CchhHHHHHHHHHHHcCC----CCcch----HHHHHHHHHHHhhccccCCCCCCccccCCCCCCCCCCCCCCCCCCChhh
Q 043885 418 SQLWDTAFAVHAILSTNL----VDEYG----SMLKKANNYIKTTQVRTKSFEDPSCWYRHEFQEGWPFSSLDNGWIATDT 489 (765)
Q Consensus 418 s~~WDTalai~AL~~ag~----~~~~~----~~l~kA~~~L~~~Q~~~~~~Gd~~~~~~~~~~GgW~fs~~~~~~pd~D~ 489 (765)
|...-+.++...|.+++. .++.. ..|+++++-+++.|..+ |+|.. |+ . .-++.-.
T Consensus 337 s~~~p~i~v~~yl~~t~q~~~l~~~~~~~a~~~l~~gyqrll~~q~~D---Gsfs~---------w~--~---~~~s~wL 399 (767)
T 4fxk_B 337 IYLAPTLAASRYLDKTEQWSTLPPETKDHAVDLIQKGYMRIQQFRKAD---GSYAA---------WL--S---RDSSTWL 399 (767)
T ss_dssp GGTHHHHHHHHHHHHTCTTTTSCSSHHHHHHHHHHHHHHHHTTTBCTT---SCBBS---------SS--S---SCBCHHH
T ss_pred HhhhhhhhHHHHHHhhhhhcccCHHHHHHHHHHHHHHHHHHHHhhcCC---CCccc---------CC--C---CCCCchh
Confidence 455677888888888874 33322 23677777777777664 66532 22 1 2246678
Q ss_pred hHHHHHHHHHhccccccccCCCCChHHHHHHHHHHHhccccCCCccccccCCCcchhhccccccccccccccCCccCcHH
Q 043885 490 TAEGLNVSVLLSEMSYDLVGEAIPLNRLFEAVNVVLSLQNSSGGVASYERTRSYAWMEMLNPVENFGESIIDYQYVECTS 569 (765)
Q Consensus 490 TA~aL~aL~~l~~~~~~~~g~~~~~~~l~~av~~Lls~Qn~dGGw~~~e~~~~~~~le~l~p~e~f~~~~~d~~~~d~Ta 569 (765)
||.+++.|..+... ..++.+.+.++++||++.|.+||.|.....--... .-+....+...+..||
T Consensus 400 TAyV~~~l~~A~~~------i~id~~~i~~a~~wL~~~Q~~~G~f~e~g~~~~~~---------~~gg~~~~~~~~~ltA 464 (767)
T 4fxk_B 400 TAFVLKVLSLAQEQ------VGGSPEKLQETSNWLLSQQQADGSFQDPCPVLDRS---------MQGGLVGNDETVALTA 464 (767)
T ss_dssp HHHHHHHHHHTCSS------SSCCHHHHHHHHHHHHHTBCTTSCBCCSSCSCCCC---------CCSSTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh------cCcchHHHHHHHHHHHHhhhhcccchhcchhcchh---------hcCCcCCCccchhHHH
Confidence 99999999987642 23678899999999999999999996432211000 0011101112345789
Q ss_pred HHHHHHHhccCcCCcc----chhHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCchhHHHHHHHHHHHcCCCCCChHHHHH
Q 043885 570 STIQCLKSFTKHYPKH----RRREIEEFIAKGANFIESIQRPDGWWYGSWGVCFTYGTWFGIKGLVDSGRKYENSRSIRK 645 (765)
Q Consensus 570 ~~l~aL~~~~~~~p~~----r~~~i~~~I~rAv~~L~~~Q~~DGsW~g~wg~~~~YgT~~al~aL~aaG~~~~~~~~i~r 645 (765)
.++.+|...+...... -...+...|.||++||.+....+ ....|+.+.+..+|..+|.. ......
T Consensus 465 yvliaL~e~~~~~~~~~~~~~~~~~~~~i~ka~~~L~~~~~~~--------~~~~y~~Al~ayaL~l~~~~---~~~~~~ 533 (767)
T 4fxk_B 465 FVTIALHHGLAVFQDEGAEPLKQRVEASISKANSFLGEKASAG--------LLGAHAAAITAYALSLTKAP---VDLLGV 533 (767)
T ss_dssp HHHHHHHHHHTTSTTCCCCSHHHHHHHHHHHHHHHHHHHTTSC--------CCCHHHHHHHHHHHHHHTCT---THHHHH
T ss_pred HHHHHHHhcCCccccchhhhhHhHHHHHHHHHHHHHHHHhhcc--------cCCHHHHHHHHHHHHHcCCc---HHHHHH
Confidence 9999987665432221 12346678999999998765432 23478877777777777654 344455
Q ss_pred HHHHHHhcccCCCc---ccccccccccc---cccc------CCCCCC-cHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHH
Q 043885 646 ACDFLLSKQLDSGG---WGESYVSCVDR---VYTN------LEGNKA-HNVNTAWAMLALIEAGQAHRDPTPLHRAARVL 712 (765)
Q Consensus 646 av~~Lls~Q~~DGG---WGes~~s~~~~---~Y~~------l~g~~S-~~~~TAwALlAL~~aG~~~~d~~~i~rav~~L 712 (765)
+.+-|.+.-..+|+ |.....+.... ...+ .....| .+..||+||++++.... +.+.+.+.++||
T Consensus 534 ~~~~L~~~a~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~VEttayaLla~l~~~~---~~~~a~~iv~WL 610 (767)
T 4fxk_B 534 AHNNLMAMAQETGDNLYWGSVTGSQSNAVSPTPAPRNPSDPMPQAPALWIETTAYALLHLLLHEG---KAEMADQASAWL 610 (767)
T ss_dssp HHHHHHTTCCBCSSCBCCCCCCCCCGGGGCCSSSCCCSSSCBCCCCHHHHHHHHHHHHHHHHHTS---SCHHHHHHHHHH
T ss_pred HHHHHHhhcEEcCCeeEEeccCCCcccccccccccccccccccccchHHHHHHHHHHHHHHhcCC---chhHHHHHHHHH
Confidence 56666665444332 43221111000 0000 001112 36678999999987642 244688999999
Q ss_pred HhcCcCCCCCCCCccccccCCccccccCCccchHHHHHHHHHHHhcc
Q 043885 713 INSQMENGDFPQQEIMGSFTRNCMISYSAWRNIFPIWALGAFYNRVL 759 (765)
Q Consensus 713 ~~~Q~~dG~w~~~~~~g~f~~~~~~~Y~~Yr~~fpl~ALg~y~~~~~ 759 (765)
.++|+.+|+|... .-.++.|.||++|..+..
T Consensus 611 ~~Qr~~~Ggf~ST----------------QdTv~AL~ALa~y~~~~~ 641 (767)
T 4fxk_B 611 TRQGSFQGGFRST----------------QDTVIALDALSAYWIASH 641 (767)
T ss_dssp HHTCCTTSSCSSH----------------HHHHHHHHHHHHHHHHTC
T ss_pred HHhhcCCCCCcCH----------------HHHHHHHHHHHHHHHhcc
Confidence 9999999999743 347899999999976654
No 30
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=99.06 E-value=1.9e-09 Score=137.06 Aligned_cols=217 Identities=13% Similarity=0.026 Sum_probs=142.0
Q ss_pred hhHHHHHHHHHHHcCCC-Cc----chHHHHHHHHHHHhhccccCCCCCCccccCCCCCCCCCCCCCCCCCCChhhhHHHH
Q 043885 420 LWDTAFAVHAILSTNLV-DE----YGSMLKKANNYIKTTQVRTKSFEDPSCWYRHEFQEGWPFSSLDNGWIATDTTAEGL 494 (765)
Q Consensus 420 ~WDTalai~AL~~ag~~-~~----~~~~l~kA~~~L~~~Q~~~~~~Gd~~~~~~~~~~GgW~fs~~~~~~pd~D~TA~aL 494 (765)
..-..++..-|.+++.. ++ ....|++++++|+..|..+ |+|.. |+-.+ ++..++.+.||.++
T Consensus 957 ~~P~l~~~~yL~~t~q~~~~~~~~a~~~i~~g~~~ll~~q~~d---Ggf~~---------f~~~~-~~~~~s~wlTAyv~ 1023 (1451)
T 4acq_A 957 FAPNIYVLDYLNETQQLTPEIKSKAIGYLNTGYQRQLNYKHYD---GSYST---------FGERY-GRNQGNTWLTAFVL 1023 (1451)
T ss_dssp HHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHGGGBCTT---SCBCS---------STTGG-GCCCCCHHHHHHHH
T ss_pred hhhHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHhhcCCC---CCeee---------ccCCC-CCCCCchhHHHHHH
Confidence 34445555666666642 22 1234789999999999875 55532 22111 11346788999999
Q ss_pred HHHHHhccccccccCCCCChHHHHHHHHHHHhccccCCCccccccCCCcchhhcccccccccccccc--CCccCcHHHHH
Q 043885 495 NVSVLLSEMSYDLVGEAIPLNRLFEAVNVVLSLQNSSGGVASYERTRSYAWMEMLNPVENFGESIID--YQYVECTSSTI 572 (765)
Q Consensus 495 ~aL~~l~~~~~~~~g~~~~~~~l~~av~~Lls~Qn~dGGw~~~e~~~~~~~le~l~p~e~f~~~~~d--~~~~d~Ta~~l 572 (765)
++|..+... ..++.+.+.+|++||++.|++||+|....+- +.+.|.+ ..++..|+.++
T Consensus 1024 ~~l~~a~~~------~~v~~~~l~~a~~wL~~~Q~~dG~f~~~g~~--------------~~~~m~gg~~~~~~lTAyvl 1083 (1451)
T 4acq_A 1024 KTFAQARAY------IFIDEAHITQALIWLSQRQKDNGCFRSSGSL--------------LNNAIKGGVEDEVTLSAYIT 1083 (1451)
T ss_dssp HHHHHHTTT------SCCCTHHHHHHHHHHHHTEETTTEECCCCCC--------------SCGGGCCSCSCHHHHHHHHH
T ss_pred HHHHHhhhh------cccCHHHHHHHHHHHHhhcccCCcccccCcc--------------cchhhcCCCCCCccchHHHH
Confidence 999987531 2467899999999999999999999632211 1111111 13455799999
Q ss_pred HHHHhccCcCCccchhHHHHHHHHHHHHHHHh------------------------------c------------CCCCC
Q 043885 573 QCLKSFTKHYPKHRRREIEEFIAKGANFIESI------------------------------Q------------RPDGW 610 (765)
Q Consensus 573 ~aL~~~~~~~p~~r~~~i~~~I~rAv~~L~~~------------------------------Q------------~~DGs 610 (765)
.||...+. +.. .+.|++|++||++. + ..+|+
T Consensus 1084 ~aL~~~g~--~~~-----~~~i~~A~~~L~~~~~~~~~~~~~~~~y~~AllAyAlal~g~~~~~~~~l~~L~~~a~~~~~ 1156 (1451)
T 4acq_A 1084 IALLEIPL--TVT-----HPVVRNALFCLESAWKTAQEGDHGSHVYTKALLAYAFALAGNQDKRKEVLKSLNEEAVKKDN 1156 (1451)
T ss_dssp HHHHHTTC--CTT-----CHHHHHHHHHHHHHHHHHTSSCSSSTHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCBCSS
T ss_pred HHHHHcCC--CCC-----CHHHHHHHHHHHHhhhhcccccccCChHHHHHHHHHHHhcCChhHHHHHHHHHHHHhhccCC
Confidence 99998764 221 35788888888754 1 11333
Q ss_pred ---CCCC-----------CCC---CchhHHHHHHHHHHHcCCC--CCChHHHHHHHHHHHhcccCCCccccccccccccc
Q 043885 611 ---WYGS-----------WGV---CFTYGTWFGIKGLVDSGRK--YENSRSIRKACDFLLSKQLDSGGWGESYVSCVDRV 671 (765)
Q Consensus 611 ---W~g~-----------wg~---~~~YgT~~al~aL~aaG~~--~~~~~~i~rav~~Lls~Q~~DGGWGes~~s~~~~~ 671 (765)
|... |.. ..+-.|++||++|..++.. ..+.+.+.+.++||.+.|+.+|||+..
T Consensus 1157 ~~~W~~~~~~~~~~~~~~~~~~~s~~vE~TayaLLall~~~~~~~~~d~~~a~~iv~WL~~qr~~~Ggf~ST-------- 1228 (1451)
T 4acq_A 1157 SVHWERPQKPKAPVGHFYEPQAPSAEVEMTSYVLLAYLTAQPAPTSEDLTSATNIVKWITKQQNAQGGFSST-------- 1228 (1451)
T ss_dssp CBCCCCCCCSSSCSSSTTCCCTTGGGGTHHHHHHHHHHCCSSCCCHHHHHHHHTTHHHHTTCCCTTSCCSSH--------
T ss_pred ceecCCCCCCccccccccccCCchHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHcCCCCCCcccH--------
Confidence 4211 101 1234699999999988642 113457888999999999999999642
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHh
Q 043885 672 YTNLEGNKAHNVNTAWAMLALIEA 695 (765)
Q Consensus 672 Y~~l~g~~S~~~~TAwALlAL~~a 695 (765)
-.|+.||.||...
T Consensus 1229 -----------QdTv~aL~ALa~Y 1241 (1451)
T 4acq_A 1229 -----------QDTVVALHALSKY 1241 (1451)
T ss_dssp -----------HHHHHHHHHHHHH
T ss_pred -----------HHHHHHHHHHHHH
Confidence 3599999999763
No 31
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=98.95 E-value=9.9e-09 Score=130.17 Aligned_cols=216 Identities=13% Similarity=0.071 Sum_probs=141.2
Q ss_pred CchhHHHHHHHHHHHcCCCC-----cchHHHHHHHHHHHhhccccCCCCCCccccCCCCCCCCCCCCCCCCCCChhhhHH
Q 043885 418 SQLWDTAFAVHAILSTNLVD-----EYGSMLKKANNYIKTTQVRTKSFEDPSCWYRHEFQEGWPFSSLDNGWIATDTTAE 492 (765)
Q Consensus 418 s~~WDTalai~AL~~ag~~~-----~~~~~l~kA~~~L~~~Q~~~~~~Gd~~~~~~~~~~GgW~fs~~~~~~pd~D~TA~ 492 (765)
|..+-..++..-|.+++.-. +....|++|+++|++.|..+ |+|+. |+ ...++.+.||.
T Consensus 844 s~~~p~~~~~~yl~~~~~~~~~~~~~~~~~i~~g~~rll~~q~~d---Ggf~~---------f~-----~~~~s~~lTa~ 906 (1325)
T 2pn5_A 844 VKFVPNILVLDYLHAIGSKEQHLIDKATNLLRQGYQNQMRYRQTD---GSFGL---------WE-----TTNGSVFLTAF 906 (1325)
T ss_dssp GGTHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHGGGBCTT---SCBCS---------SS-----SSCCCHHHHHH
T ss_pred HHHhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCC---CCeec---------cC-----CCCCCeeehHH
Confidence 44555666666666666322 23456888889999999865 66542 21 12367889999
Q ss_pred HHHHHHHhccccccccCCCCChHHHHHHHHHHHhccccCCCccccccCCCcchhhccccccccccccccCCccCcHHHHH
Q 043885 493 GLNVSVLLSEMSYDLVGEAIPLNRLFEAVNVVLSLQNSSGGVASYERTRSYAWMEMLNPVENFGESIIDYQYVECTSSTI 572 (765)
Q Consensus 493 aL~aL~~l~~~~~~~~g~~~~~~~l~~av~~Lls~Qn~dGGw~~~e~~~~~~~le~l~p~e~f~~~~~d~~~~d~Ta~~l 572 (765)
++++|..+.+ .+..++.+.+.+|++||.+.|++||.|..-...... +..+.. + .....|+.++
T Consensus 907 v~~~l~~a~~-----~~~~v~~~~l~~a~~~L~~~q~~dG~f~~~~~~~~~---------~~~g~~--~-~~~~~tayvl 969 (1325)
T 2pn5_A 907 VGTSMQTAVK-----YISDIDAAMVEKALDWLASKQHFSGRFDKAGAEYHK---------EMQGGL--R-NGVALTSYVL 969 (1325)
T ss_dssp HHHHHHHHTT-----TCSCSCHHHHHHHHHHHHHTCCTTSCCCCCSCCSCH---------HHHCCS--S-TTHHHHHHHH
T ss_pred HHHHHHHHHh-----hEEcCCHHHHHHHHHHHHhhhccCCCccccccccCh---------hhcCcc--c-CCccccHHHH
Confidence 9999998864 244577899999999999999999998532111000 000100 0 1223467777
Q ss_pred HHHHhccCcCCccchhHHHHHHHHHHHHHHHhcCC-CCCCC-----------C------------------------CCC
Q 043885 573 QCLKSFTKHYPKHRRREIEEFIAKGANFIESIQRP-DGWWY-----------G------------------------SWG 616 (765)
Q Consensus 573 ~aL~~~~~~~p~~r~~~i~~~I~rAv~~L~~~Q~~-DGsW~-----------g------------------------~wg 616 (765)
.+|...++.. .+....|++|++||.+.|+. ++.|. | .|.
T Consensus 970 ~aL~~~g~~~-----~~~~~~i~~a~~~L~~~~~~~~~~~~~a~~ayaL~l~g~~~~~~~l~~L~~~~~~~~~~~~~~w~ 1044 (1325)
T 2pn5_A 970 MALLENDIAK-----AKHAEVIQKGMTYLSNQFGSINNAYDLSIATYAMMLNGHTMKEEALNKLIDMSFIDADKNERFWN 1044 (1325)
T ss_dssp HHHHTCHHHH-----HHTHHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHTCTTHHHHHHHHHHTCEEETTTTEEECC
T ss_pred HHHhhCcccc-----cccHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHhcCCchHHHHHHHHHhhhhhccCCCcccCC
Confidence 7776543210 01235788999999887765 55441 1 121
Q ss_pred -CCchhHHHHHHHHHHHcCCCCCChHHHHHHHHHHHhcccCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHHh
Q 043885 617 -VCFTYGTWFGIKGLVDSGRKYENSRSIRKACDFLLSKQLDSGGWGESYVSCVDRVYTNLEGNKAHNVNTAWAMLALIEA 695 (765)
Q Consensus 617 -~~~~YgT~~al~aL~aaG~~~~~~~~i~rav~~Lls~Q~~DGGWGes~~s~~~~~Y~~l~g~~S~~~~TAwALlAL~~a 695 (765)
...+-.|+++|.+|.+.+. .+.+.+.++||++.|+.+|||.. .-.|++||+||...
T Consensus 1045 ~~s~ve~tA~aLlall~~~~----~~~~~~~v~wL~~q~~~~g~w~s-------------------Tq~T~~aL~AL~~y 1101 (1325)
T 2pn5_A 1045 TTNPIETTAYALLSFVMAEK----YTDGIPVMNWLVNQRYVTGSFPS-------------------TQDTFVGLKALTKM 1101 (1325)
T ss_dssp SSSHHHHHHHHHHHHHHTTC----HHHHHHHHHHHHTTCCTTSSCSS-------------------HHHHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHhhhcc----chhhHHHHHHHHhccCCCCCccc-------------------hHHHHHHHHHHHHH
Confidence 1233467899999998763 35778999999999999999964 24699999999764
No 32
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=98.92 E-value=5.2e-08 Score=125.92 Aligned_cols=257 Identities=18% Similarity=0.149 Sum_probs=166.4
Q ss_pred CchhHHHHHHHHHHHcCCC----Cc----chHHHHHHHHHHHhhccccCCCCCCccccCCCCCCCCCCCCCCCCCCChhh
Q 043885 418 SQLWDTAFAVHAILSTNLV----DE----YGSMLKKANNYIKTTQVRTKSFEDPSCWYRHEFQEGWPFSSLDNGWIATDT 489 (765)
Q Consensus 418 s~~WDTalai~AL~~ag~~----~~----~~~~l~kA~~~L~~~Q~~~~~~Gd~~~~~~~~~~GgW~fs~~~~~~pd~D~ 489 (765)
|...-..++...|.+++.- .+ ....|+.+++-+++.|..+ |+|+ -|+- ..++...
T Consensus 1015 s~~~P~~~~~~yL~~~~q~~~~~~~~~~~~~~~i~~g~~r~l~~q~~d---Gsfs---------~w~~-----~~~s~wL 1077 (1661)
T 2b39_A 1015 IGMTPTVIAVHYLDSTDQWEKFGLEKRQESLELIRKGYTQQLAFRQKS---SAYA---------AFQY-----RPPSTWL 1077 (1661)
T ss_dssp GGTHHHHHHHHHHHHHTCGGGSCSHHHHHHHHHHHHHHHHHHTTBCTT---SCBC---------SSTT-----SCCCHHH
T ss_pred hhcccHHHHHHHHHhcCcccccCHHHHHHHHHHHHHHHHHHHHhhcCC---CCcc---------ccCC-----CCCchhh
Confidence 4455566666666666531 22 1234566666677777654 6653 2331 2356778
Q ss_pred hHHHHHHHHHhccccccccCCCCChHHHHHHHHHHHh-ccccCCCccccccCCCcchhhccccccccccccc------cC
Q 043885 490 TAEGLNVSVLLSEMSYDLVGEAIPLNRLFEAVNVVLS-LQNSSGGVASYERTRSYAWMEMLNPVENFGESII------DY 562 (765)
Q Consensus 490 TA~aL~aL~~l~~~~~~~~g~~~~~~~l~~av~~Lls-~Qn~dGGw~~~e~~~~~~~le~l~p~e~f~~~~~------d~ 562 (765)
||.++++|..+... + .++...+.+|++||.+ .|+.||.|..-..- +...|. ..
T Consensus 1078 TAyv~~~l~~A~~~-----~-~v~~~~l~~a~~~L~~~~q~~~g~f~~~~~~--------------~~~~~~gg~~~~~~ 1137 (1661)
T 2b39_A 1078 TAYVVKVFALAANL-----I-AIDSKDLCETVKWLILEKQKPDGIFQEDGPV--------------IHQEMIGGFRDTRE 1137 (1661)
T ss_dssp HHHHHHHHHHHTTT-----S-CCCHHHHHHHHHHHHHHTBCTTSCBCCCSCC--------------CCTTSCCCTTCCTT
T ss_pred hHHHHHHHHhhhhc-----c-cCCHHHHHHHHHHhhHhhCCCCCccccccce--------------echhhcCCcccccc
Confidence 99999999988642 2 4788999999999995 99999999631110 111111 01
Q ss_pred CccCcHHHHHHHHHhccCcCCccchhHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCchhHHHHHHHHHHHcCCCCCChHH
Q 043885 563 QYVECTSSTIQCLKSFTKHYPKHRRREIEEFIAKGANFIESIQRPDGWWYGSWGVCFTYGTWFGIKGLVDSGRKYENSRS 642 (765)
Q Consensus 563 ~~~d~Ta~~l~aL~~~~~~~p~~r~~~i~~~I~rAv~~L~~~Q~~DGsW~g~wg~~~~YgT~~al~aL~aaG~~~~~~~~ 642 (765)
+....|+.++.+|...++...+ ...+....|.+|++||.+.... + ...|+.+.+..||..+|..
T Consensus 1138 ~~~~ltAyvl~aL~~~~~~~~~-~~~~~~~~i~~a~~yL~~~~~~---~------~~~y~~A~layAL~l~g~~------ 1201 (1661)
T 2b39_A 1138 KDVSLTAFVLIALHEAKDICEA-QVNSLGRSIAKAGDFLENHYRE---L------RRPYTVAIAAYALALLGKL------ 1201 (1661)
T ss_dssp SSHHHHHHHHHHHHHTTTTTTT-TCSSHHHHHHHHHHHHHHHTTT---C------CSHHHHHHHHHHHHHTTCC------
T ss_pred CccccHHHHHHHHHhccccccc-cCcchhHHHHHHHHHHHHhhhc---c------CCHHHHHHHHHHHHHcCCc------
Confidence 1234588889999876542100 0112467899999999875432 1 3478888777788888765
Q ss_pred HHHHHHHHHhcccCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHhcCcCCCCC
Q 043885 643 IRKACDFLLSKQLDSGGWGESYVSCVDRVYTNLEGNKAHNVNTAWAMLALIEAGQAHRDPTPLHRAARVLINSQMENGDF 722 (765)
Q Consensus 643 i~rav~~Lls~Q~~DGGWGes~~s~~~~~Y~~l~g~~S~~~~TAwALlAL~~aG~~~~d~~~i~rav~~L~~~Q~~dG~w 722 (765)
.+++++.|.+.......|.... +...++..||+||+||+..+..+ .+.+.++||.++|+.+|+|
T Consensus 1202 a~~~l~~L~~~~~~~~~W~~~~------------~~~~~vE~tayaLlall~~~~~~----~~~~iv~wL~~qr~~~gg~ 1265 (1661)
T 2b39_A 1202 EGDRLTKFLNTAKEKNRWEEPN------------QKLYNVEATSYALLALLARKDYD----TTPPVVRWLNEQRYYGGGY 1265 (1661)
T ss_dssp CHHHHHHHHHHSBTTTBCCCSS------------CHHHHHHHHHHHHHHHHHHTCTT----TSHHHHHHHHHCCTBTTBB
T ss_pred HHHHHHHHHhhccCCCCCCCCC------------CCcchHHHHHHHHHHHHhcCChh----hHHHHHHHHHhcccCCCCc
Confidence 2455666776655334464320 11135678999999999987542 3677889999999999999
Q ss_pred CCCccccccCCccccccCCccchHHHHHHHHHHHhcc
Q 043885 723 PQQEIMGSFTRNCMISYSAWRNIFPIWALGAFYNRVL 759 (765)
Q Consensus 723 ~~~~~~g~f~~~~~~~Y~~Yr~~fpl~ALg~y~~~~~ 759 (765)
... ...++.|.||++|..+..
T Consensus 1266 ~ST----------------qdT~~Al~AL~~y~~~~~ 1286 (1661)
T 2b39_A 1266 GST----------------QATFMVFQALAQYQKDVP 1286 (1661)
T ss_dssp CSH----------------HHHHHHHHHHHHHHHHSC
T ss_pred ccc----------------hHHHHHHHHHHHHHHHcC
Confidence 752 345799999999986553
No 33
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=98.80 E-value=2.3e-07 Score=120.09 Aligned_cols=220 Identities=17% Similarity=0.097 Sum_probs=142.5
Q ss_pred CCCChhhhHHHHHHHHHhccccccccCCCCChHHHHHHHHHHHh-ccccCCCccccccCCCcchhhcccccccccccccc
Q 043885 483 GWIATDTTAEGLNVSVLLSEMSYDLVGEAIPLNRLFEAVNVVLS-LQNSSGGVASYERTRSYAWMEMLNPVENFGESIID 561 (765)
Q Consensus 483 ~~pd~D~TA~aL~aL~~l~~~~~~~~g~~~~~~~l~~av~~Lls-~Qn~dGGw~~~e~~~~~~~le~l~p~e~f~~~~~d 561 (765)
..++...||.++++|..+.+. + .++.+.+.+|++||.+ .|+.||.|..-... +...|.+
T Consensus 1072 ~~~s~wLTAyv~~~l~~A~~~-----~-~v~~~~l~~a~~~L~~~~q~~~g~f~~~~~~--------------~~~~~~g 1131 (1676)
T 3cu7_A 1072 GSASTWLTAFALRVLGQVNKY-----V-EQNQNSICNSLLWLVENYQLDNGSFKENSQY--------------QPIKLQG 1131 (1676)
T ss_dssp SCCCHHHHHHHHHHHHHHHTT-----S-CCCHHHHHHHHHHHHHHSBCTTSCBCCCSSC--------------CCCCCCS
T ss_pred CCCcEEEeHHHHHHHHHHHhc-----c-cCCHHHHHHHHHHHHHhhCCCCCcccCCccc--------------cchhhcC
Confidence 345778899999999988642 2 4788999999999999 99999998531110 1011110
Q ss_pred -------CCccCcHHHHHHHHHhccCcCCccchhHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCchhHHHHHHHHHHHcC
Q 043885 562 -------YQYVECTSSTIQCLKSFTKHYPKHRRREIEEFIAKGANFIESIQRPDGWWYGSWGVCFTYGTWFGIKGLVDSG 634 (765)
Q Consensus 562 -------~~~~d~Ta~~l~aL~~~~~~~p~~r~~~i~~~I~rAv~~L~~~Q~~DGsW~g~wg~~~~YgT~~al~aL~aaG 634 (765)
.+.+..|+.++.+|...++.. ...+....|.+|++||.+.... + ...|+.+.+..||..+|
T Consensus 1132 g~~~~~~~~~~~ltAyvl~aL~~~~~~~---~~~~~~~~i~~a~~yL~~~~~~---~------~~~y~~A~lA~Al~l~g 1199 (1676)
T 3cu7_A 1132 TLPVEARENSLYLTAFTVIGIRKAFDIC---PLVKIDTALIKADNFLLENTLP---A------QSTFTLAISAYALSLGD 1199 (1676)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTGGGS---CCHHHHHHHHHHHHHHHHHHSS---C------SCHHHHHHHHHHHTTSC
T ss_pred CcccccccCccccHHHHHHHHHhccccc---CCcccHHHHHHHHHHHHHhhhc---c------CCHHHHHHHHHHHHhcC
Confidence 012346788888887654321 1123567899999999876432 1 34677777666777777
Q ss_pred CCCCChHHHHHHHHHHHhcccCCC------cccccccccccccccc-CCCCCCcHHHHHHHHHHHHHhCCCCCCcHHHHH
Q 043885 635 RKYENSRSIRKACDFLLSKQLDSG------GWGESYVSCVDRVYTN-LEGNKAHNVNTAWAMLALIEAGQAHRDPTPLHR 707 (765)
Q Consensus 635 ~~~~~~~~i~rav~~Lls~Q~~DG------GWGes~~s~~~~~Y~~-l~g~~S~~~~TAwALlAL~~aG~~~~d~~~i~r 707 (765)
... ...+++++.|.+....+| -|..... .+.|.. ..+...++..||+||+||+..+ +.+.+.+
T Consensus 1200 ~~~---~~a~~~l~~L~~~a~~~~~~~~~~~w~~~~~---~~~~~~~~~~~~~~ve~tayaLlall~~~----~~~~~~~ 1269 (1676)
T 3cu7_A 1200 KTH---PQFRSIVSALKREALVKGNPPIYRFWKDNLQ---HKDSSVPNTGTARMVETTAYALLTSLNLK----DINYVNP 1269 (1676)
T ss_dssp TTC---HHHHHHHHHHHHHCEEETTTTSEEECCSCSS---CCSSCCCSCCCHHHHHHHHHHHHHHHHTT----CHHHHHH
T ss_pred Cch---hhHHHHHHHHHhhhhhccCCccccCCCCCCC---CccccccCCCccchHHHHHHHHHHHHhcC----ChhHHHH
Confidence 552 224566777777655332 4543210 011100 0011125678999999999976 2445788
Q ss_pred HHHHHHhcCcCCCCCCCCccccccCCccccccCCccchHHHHHHHHHHHhccC
Q 043885 708 AARVLINSQMENGDFPQQEIMGSFTRNCMISYSAWRNIFPIWALGAFYNRVLL 760 (765)
Q Consensus 708 av~~L~~~Q~~dG~w~~~~~~g~f~~~~~~~Y~~Yr~~fpl~ALg~y~~~~~~ 760 (765)
.++||.++|+.+|+|... ..+++.|.||++|..+...
T Consensus 1270 iv~wL~~qr~~~Gg~~ST----------------QdT~~Al~AL~~y~~~~~~ 1306 (1676)
T 3cu7_A 1270 VIKWLSEEQRYGGGFYST----------------QDTINAIEGLTEYSLLVKQ 1306 (1676)
T ss_dssp HHHHHHHHSCSSSCCSTT----------------TTHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHhccCCCCCcccc----------------HHHHHHHHHHHHHHHHcCC
Confidence 899999999998999743 3467999999999776543
No 34
>2bb6_A TCII, TC II, transcobalamin II; alpha_6 - alpha_6 barrel, transport protein; HET: B12; 2.00A {Bos taurus} PDB: 2bbc_A* 2v3n_A* 2v3p_A* 2bb5_A*
Probab=98.74 E-value=1.8e-07 Score=103.07 Aligned_cols=147 Identities=16% Similarity=0.115 Sum_probs=102.0
Q ss_pred hhHHHHHHHHHhccccccccCCCCChHHHHHHHHHHHhccccCCCccccccCCCcchhhccccccccccccccCCccCcH
Q 043885 489 TTAEGLNVSVLLSEMSYDLVGEAIPLNRLFEAVNVVLSLQNSSGGVASYERTRSYAWMEMLNPVENFGESIIDYQYVECT 568 (765)
Q Consensus 489 ~TA~aL~aL~~l~~~~~~~~g~~~~~~~l~~av~~Lls~Qn~dGGw~~~e~~~~~~~le~l~p~e~f~~~~~d~~~~d~T 568 (765)
-.+.+++||...+ .++.. +.+..|+..|+ +++|.. . +...+|.|
T Consensus 138 q~sL~vLALC~~g--------~~v~~----~~v~~Ll~~~~-~~~~~~-g----------------------~~~sVDT~ 181 (414)
T 2bb6_A 138 QYSLGILALCVHQ--------KRVHD----SVVGKLLYAVE-HKPHLL-Q----------------------DHVSVDTM 181 (414)
T ss_dssp HHHHHHHHHHHTT--------CCCCH----HHHHHHHHHHH-SSSCSC-C----------------------TTTHHHHH
T ss_pred HHHHHHHHHHHcC--------CCccH----HHHHHHHHHhh-ccCcCC-C----------------------CcccccHH
Confidence 3566777776542 33333 36677887776 444431 0 01258899
Q ss_pred HHHHHHHHhccCc--CCccchhHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCchhHHHHHHHHHHHcCCCCCCh-HHHHH
Q 043885 569 SSTIQCLKSFTKH--YPKHRRREIEEFIAKGANFIESIQRPDGWWYGSWGVCFTYGTWFGIKGLVDSGRKYENS-RSIRK 645 (765)
Q Consensus 569 a~~l~aL~~~~~~--~p~~r~~~i~~~I~rAv~~L~~~Q~~DGsW~g~wg~~~~YgT~~al~aL~aaG~~~~~~-~~i~r 645 (765)
|+++.||.-+++. ++.. ...++.+|+..+++|.+.|++||+|. .+|.|.+|++||.++|..+... ....+
T Consensus 182 AMA~lAL~C~~~~~~~~~~-~~~i~~al~~l~~~l~~~Q~~dG~FG------N~~ST~lA~QAL~~~~~~~~~~~w~~~~ 254 (414)
T 2bb6_A 182 AMAGMAFSCLELSNLNPKQ-RNRINLALKRVQEKILKAQTPEGYFG------NVYSTPLALQLLMGSLRPSVELGTACLK 254 (414)
T ss_dssp HHHHHHHHHHHHHTSCGGG-HHHHHHHHHHHHHHHHHTBCTTSCBS------STTTHHHHHHHHTTCSSCCHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCcch-HHHHHHHHHHHHHHHHHhhcCCCCcc------chhhHHHHHHHHHhcCCCcccccchHHH
Confidence 9999999877653 1111 22344455555588888999999883 3788999999999999875221 37889
Q ss_pred HHHHHHhcccCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHHhCCC
Q 043885 646 ACDFLLSKQLDSGGWGESYVSCVDRVYTNLEGNKAHNVNTAWAMLALIEAGQA 698 (765)
Q Consensus 646 av~~Lls~Q~~DGGWGes~~s~~~~~Y~~l~g~~S~~~~TAwALlAL~~aG~~ 698 (765)
++++|++ |++||+|+ ++..|+-+|.||.--+..
T Consensus 255 a~~~Ll~-q~~dG~F~-------------------np~ataQ~lpaL~gkty~ 287 (414)
T 2bb6_A 255 AKAALQA-SLQHKTFQ-------------------NPLMISQLLPVLNQKSYV 287 (414)
T ss_dssp HHHHHHH-HHTTTCCC-------------------SHHHHHHHHHHTTTCCGG
T ss_pred HHHHHHH-hccCCCCC-------------------ChHHHHHHHHHhcCCCcc
Confidence 9999999 99999995 256899999999865544
No 35
>2bb6_A TCII, TC II, transcobalamin II; alpha_6 - alpha_6 barrel, transport protein; HET: B12; 2.00A {Bos taurus} PDB: 2bbc_A* 2v3n_A* 2v3p_A* 2bb5_A*
Probab=98.66 E-value=1.7e-07 Score=103.25 Aligned_cols=150 Identities=13% Similarity=0.030 Sum_probs=103.5
Q ss_pred CCchhHHHHHHHHHHHcCCCCcchHHHHHHHHHHHhhccccCCCCCCccccCCCCCCCCCCCCCCCCCCChhhhHHHHHH
Q 043885 417 GSQLWDTAFAVHAILSTNLVDEYGSMLKKANNYIKTTQVRTKSFEDPSCWYRHEFQEGWPFSSLDNGWIATDTTAEGLNV 496 (765)
Q Consensus 417 gs~~WDTalai~AL~~ag~~~~~~~~l~kA~~~L~~~Q~~~~~~Gd~~~~~~~~~~GgW~fs~~~~~~pd~D~TA~aL~a 496 (765)
.+..+..+|+++|||..|..-. .+.+..|...|..+ ++. -|+ +-++|.||.|++|
T Consensus 133 ~tn~Yq~sL~vLALC~~g~~v~-----~~~v~~Ll~~~~~~----~~~-------~g~---------~~sVDT~AMA~lA 187 (414)
T 2bb6_A 133 RTSYYQYSLGILALCVHQKRVH-----DSVVGKLLYAVEHK----PHL-------LQD---------HVSVDTMAMAGMA 187 (414)
T ss_dssp SSCHHHHHHHHHHHHHTTCCCC-----HHHHHHHHHHHHSS----SCS-------CCT---------TTHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHcCCCcc-----HHHHHHHHHHhhcc----CcC-------CCC---------cccccHHHHHHHH
Confidence 4567899999999999987543 22444555555422 110 133 3379999999999
Q ss_pred HHHhccccccccCCCCChHHHHHHH----HHHHhccccCCCccccccCCCcchhhccccccccccccccCCccCcHHHHH
Q 043885 497 SVLLSEMSYDLVGEAIPLNRLFEAV----NVVLSLQNSSGGVASYERTRSYAWMEMLNPVENFGESIIDYQYVECTSSTI 572 (765)
Q Consensus 497 L~~l~~~~~~~~g~~~~~~~l~~av----~~Lls~Qn~dGGw~~~e~~~~~~~le~l~p~e~f~~~~~d~~~~d~Ta~~l 572 (765)
|..+.+.. ..+...+++.+|+ ++|++.|++||+|+. +..|+.++
T Consensus 188 L~C~~~~~----~~~~~~~~i~~al~~l~~~l~~~Q~~dG~FGN----------------------------~~ST~lA~ 235 (414)
T 2bb6_A 188 FSCLELSN----LNPKQRNRINLALKRVQEKILKAQTPEGYFGN----------------------------VYSTPLAL 235 (414)
T ss_dssp HHHHHHHT----SCGGGHHHHHHHHHHHHHHHHHTBCTTSCBSS----------------------------TTTHHHHH
T ss_pred HHHHhhcC----CCcchHHHHHHHHHHHHHHHHHhhcCCCCccc----------------------------hhhHHHHH
Confidence 99886421 1123456777777 888899999999971 22499999
Q ss_pred HHHHhccCcCCccchhHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCchhHHHHHHHHHHHcCCCC
Q 043885 573 QCLKSFTKHYPKHRRREIEEFIAKGANFIESIQRPDGWWYGSWGVCFTYGTWFGIKGLVDSGRKY 637 (765)
Q Consensus 573 ~aL~~~~~~~p~~r~~~i~~~I~rAv~~L~~~Q~~DGsW~g~wg~~~~YgT~~al~aL~aaG~~~ 637 (765)
+||...+.. +. +-.-.+.+++++|.+ |.+||+|. + .-.|..+|.+|. |++|
T Consensus 236 QAL~~~~~~-~~----~~~w~~~~a~~~Ll~-q~~dG~F~-----n-p~ataQ~lpaL~--gkty 286 (414)
T 2bb6_A 236 QLLMGSLRP-SV----ELGTACLKAKAALQA-SLQHKTFQ-----N-PLMISQLLPVLN--QKSY 286 (414)
T ss_dssp HHHTTCSSC-CH----HHHHHHHHHHHHHHH-HHTTTCCC-----S-HHHHHHHHHHTT--TCCG
T ss_pred HHHHhcCCC-cc----cccchHHHHHHHHHH-hccCCCCC-----C-hHHHHHHHHHhc--CCCc
Confidence 999877542 21 111367899999998 99999984 2 347888888875 5554
No 36
>2pmv_A Gastric intrinsic factor; cobalamin transport protein alpha6-alpha6 motif two domain P transport protein; HET: NAG B12; 2.60A {Homo sapiens} PDB: 3kq4_A*
Probab=98.66 E-value=1.2e-07 Score=103.92 Aligned_cols=127 Identities=12% Similarity=0.092 Sum_probs=100.2
Q ss_pred HHHHHHHHHHhccccCCCccccccCCCcchhhccccccccccccccCCccCcHHHHHHHHHhccC---cC--CccchhHH
Q 043885 516 RLFEAVNVVLSLQNSSGGVASYERTRSYAWMEMLNPVENFGESIIDYQYVECTSSTIQCLKSFTK---HY--PKHRRREI 590 (765)
Q Consensus 516 ~l~~av~~Lls~Qn~dGGw~~~e~~~~~~~le~l~p~e~f~~~~~d~~~~d~Ta~~l~aL~~~~~---~~--p~~r~~~i 590 (765)
.-.+.|+-|+..|+.||++ | .+|.+|+++.||.-+.+ .. +.+ +.++
T Consensus 131 v~~~~v~kLl~~~~~~g~~--------------------~--------sVDT~AMa~LAL~C~~~~~~~~~~~~~-~~~i 181 (399)
T 2pmv_A 131 ATLPIAVRFAKTLLANSSP--------------------F--------NVDTGAMATLALTCMYNKIPVGSEEGY-RSLF 181 (399)
T ss_dssp HHHHHHHHHHHHHHHCCSC--------------------C--------CHHHHHHHHHHHHHHHTBCCTTCCSSH-HHHH
T ss_pred CCHHHHHHHHHHHHccCCc--------------------c--------cchHHHHHHHHHHHHhhccccccchhh-HHHH
Confidence 3455677788899988542 1 47889999999977665 21 122 3458
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCCCchhHHHHHHHHHHHcCCCCCChH-HHHHHHHHHHhcccCCCccccccccccc
Q 043885 591 EEFIAKGANFIESIQRPDGWWYGSWGVCFTYGTWFGIKGLVDSGRKYENSR-SIRKACDFLLSKQLDSGGWGESYVSCVD 669 (765)
Q Consensus 591 ~~~I~rAv~~L~~~Q~~DGsW~g~wg~~~~YgT~~al~aL~aaG~~~~~~~-~i~rav~~Lls~Q~~DGGWGes~~s~~~ 669 (765)
..+|++++++|.+.|++||+|. .+|.|..|++||.+++... ..+ ...++.++|++ |++||+|+
T Consensus 182 ~~ai~~~~~~l~~~q~~dG~fG------n~yST~LA~QAL~~~~~~~-~~~W~c~~al~~l~~-q~~~G~F~-------- 245 (399)
T 2pmv_A 182 GQVLKDIVEKISMKIKDNGIIG------DIYSTGLAMQALSVTPEPS-KKEWNCKKTTDMILN-EIKQGKFH-------- 245 (399)
T ss_dssp HHHHHHHHHHHTTSBCTTSCBS------SHHHHHHHHHHHHHCSSCC-SSCCCHHHHHHHHHH-HHTTTTTC--------
T ss_pred HHHHHHHHHHHHHhhcCCCccc------ccccHHHHHHHHHhcCCCc-cccccHHHHHHHHHH-HhhCCCcC--------
Confidence 8999999999999999999983 4899999999999998753 334 67899999999 99999995
Q ss_pred cccccCCCCCCcHHHHHHHHHHHHHhCCC
Q 043885 670 RVYTNLEGNKAHNVNTAWAMLALIEAGQA 698 (765)
Q Consensus 670 ~~Y~~l~g~~S~~~~TAwALlAL~~aG~~ 698 (765)
++..|+-+|.||...+..
T Consensus 246 -----------np~~taQilPaL~~ktyl 263 (399)
T 2pmv_A 246 -----------NPMSIAQILPSLKGKTYL 263 (399)
T ss_dssp -----------SHHHHHHHHHHHTTCCGG
T ss_pred -----------CHHHHHHHHHHhcCCCcc
Confidence 267899999999776554
No 37
>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*
Probab=98.55 E-value=8.2e-09 Score=131.98 Aligned_cols=254 Identities=13% Similarity=0.092 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHcCCCC--------cchHHHHHHHHHHHhhccccCCCCCCccccCCCCCCCCCCCCCCCCCCChhhhH
Q 043885 420 LWDTAFAVHAILSTNLVD--------EYGSMLKKANNYIKTTQVRTKSFEDPSCWYRHEFQEGWPFSSLDNGWIATDTTA 491 (765)
Q Consensus 420 ~WDTalai~AL~~ag~~~--------~~~~~l~kA~~~L~~~Q~~~~~~Gd~~~~~~~~~~GgW~fs~~~~~~pd~D~TA 491 (765)
..-..++...|..++.-. +....|+++++-+++.|..+ |+|+ .|+- ..+...-||
T Consensus 1001 ~~P~v~v~~yL~~t~q~~~~~~e~~~ka~~~i~~Gyqr~l~yq~~D---Gsfs---------~w~~-----~~~stWLTA 1063 (1642)
T 3prx_B 1001 MAAPVIATYYLDTTEQWETLGINRRTEAVNQIVTGYAQQMVYKKAD---HSYA---------AFTN-----RASSSWLTA 1063 (1642)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhhhccccccChhHHHHHHHHHHHHHHHHHHhcCCC---CCee---------cCCC-----CCCccccHH
Confidence 334455555565554211 12234555555566666554 5543 2321 124556799
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHHHHHHHh-ccccCCCccccccCCCcchhhcccccccccccccc-----CCcc
Q 043885 492 EGLNVSVLLSEMSYDLVGEAIPLNRLFEAVNVVLS-LQNSSGGVASYERTRSYAWMEMLNPVENFGESIID-----YQYV 565 (765)
Q Consensus 492 ~aL~aL~~l~~~~~~~~g~~~~~~~l~~av~~Lls-~Qn~dGGw~~~e~~~~~~~le~l~p~e~f~~~~~d-----~~~~ 565 (765)
.+++.|..+.+ .+..+++..+.++++||++ .|++||.|..-.+- |...|.. -+.+
T Consensus 1064 yV~k~f~~A~~-----~i~~Vd~~~l~~~~~wL~~~~Q~~dG~F~e~~~v--------------~~~~m~Gg~~~~~~~~ 1124 (1642)
T 3prx_B 1064 YVVKVFAMAAK-----MVAGISHEIICGGVRWLILNRQQPDGAFKENAPV--------------LSGTMQGGIQGAEEEV 1124 (1642)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHh-----hccCCCHHHHHHHHHHHHhhccCCCCcccccccc--------------cchhccCCccCCCCcc
Confidence 99999988753 2334788999999999998 89999999632211 1111111 1245
Q ss_pred CcHHHHHHHHHhccCcCCccchhHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCchhHHHHHHHHHHHcCCCCCChHHHHH
Q 043885 566 ECTSSTIQCLKSFTKHYPKHRRREIEEFIAKGANFIESIQRPDGWWYGSWGVCFTYGTWFGIKGLVDSGRKYENSRSIRK 645 (765)
Q Consensus 566 d~Ta~~l~aL~~~~~~~p~~r~~~i~~~I~rAv~~L~~~Q~~DGsW~g~wg~~~~YgT~~al~aL~aaG~~~~~~~~i~r 645 (765)
..||.|+.||...+...+.. ...+..+|+||+.||++.-.. ....|..+.+.-||+.+|.. .. .
T Consensus 1125 ~lTA~vliaL~e~~~~~~~~-~~~~~~~i~~a~~~L~~~~~~---------~~~~Y~~Ai~aYAl~l~~~~--~~----~ 1188 (1642)
T 3prx_B 1125 YLTAFILVALLESKTICNDY-VNSLDSSIKKATNYLLKKYEK---------LQRPYTTALTAYALAAADQL--ND----D 1188 (1642)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cchHHHHHHHHhcccccccc-cccchHHHHHHHHHHHHhhhc---------CCCHHHHHHHHHHHHhcCCc--hH----H
Confidence 68999999998765422111 112457899999999875321 12367766666677767654 11 2
Q ss_pred HHHHHHhcccCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHhcCcCCCCCCCC
Q 043885 646 ACDFLLSKQLDSGGWGESYVSCVDRVYTNLEGNKAHNVNTAWAMLALIEAGQAHRDPTPLHRAARVLINSQMENGDFPQQ 725 (765)
Q Consensus 646 av~~Lls~Q~~DGGWGes~~s~~~~~Y~~l~g~~S~~~~TAwALlAL~~aG~~~~d~~~i~rav~~L~~~Q~~dG~w~~~ 725 (765)
+.+-|.+. ..--|... .+...++..||||||||+..+.. ....+.++||.++|+..|+|...
T Consensus 1189 ~l~~l~~~--~~~~W~~~------------~~~~~~VE~TaYaLLa~l~~~~~----~~a~~iv~WL~~qr~~~Ggf~ST 1250 (1642)
T 3prx_B 1189 RVLMAAST--GRDHWEEY------------NAHTHNIEGTSYALLALLKMKKF----DQTGPIVRWLTDQNFYGETYGQT 1250 (1642)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHhc--CCCCCCCC------------CCchHHHHHHHHHHHHHhccCch----hhHHHHHHHHHHhccCCCcccCc
Confidence 22223222 11124321 01124688999999999987643 24678999999999999999642
Q ss_pred ccccccCCccccccCCccchHHHHHHHHHHHhcc
Q 043885 726 EIMGSFTRNCMISYSAWRNIFPIWALGAFYNRVL 759 (765)
Q Consensus 726 ~~~g~f~~~~~~~Y~~Yr~~fpl~ALg~y~~~~~ 759 (765)
.-.+..|.||++|..+..
T Consensus 1251 ----------------QdTvvaLqALa~Y~~~~~ 1268 (1642)
T 3prx_B 1251 ----------------QATVMAFQALAEYEIQMP 1268 (1642)
T ss_dssp ----------------------------------
T ss_pred ----------------HHHHHHHHHHHHHHHhcC
Confidence 135678999999987654
No 38
>4fxk_B Complement C4-A alpha chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_B*
Probab=98.32 E-value=3.4e-05 Score=92.52 Aligned_cols=232 Identities=16% Similarity=0.112 Sum_probs=131.4
Q ss_pred HHHHHHHHhhhheeccCCc--eeeccCCCchhHHHHHHHHHHHcCCC-CcchHHHHHHHHHHHhhccccCCCCCCccccC
Q 043885 392 YKHHLARIKDYLWVAEDGM--KMQAYNGSQLWDTAFAVHAILSTNLV-DEYGSMLKKANNYIKTTQVRTKSFEDPSCWYR 468 (765)
Q Consensus 392 ~~~~l~~l~~~l~~~~dG~--~~q~~~gs~~WDTalai~AL~~ag~~-~~~~~~l~kA~~~L~~~Q~~~~~~Gd~~~~~~ 468 (765)
++.+++++..| ...||. ...+. .+..|-||+++..|..+.-- .-....+.++.+||.+.|..+ |.|....+
T Consensus 370 l~~gyqrll~~--q~~DGsfs~w~~~-~~s~wLTAyV~~~l~~A~~~i~id~~~i~~a~~wL~~~Q~~~---G~f~e~g~ 443 (767)
T 4fxk_B 370 IQKGYMRIQQF--RKADGSYAAWLSR-DSSTWLTAFVLKVLSLAQEQVGGSPEKLQETSNWLLSQQQAD---GSFQDPCP 443 (767)
T ss_dssp HHHHHHHHTTT--BCTTSCBBSSSSS-CBCHHHHHHHHHHHHHTCSSSSCCHHHHHHHHHHHHHTBCTT---SCBCCSSC
T ss_pred HHHHHHHHHHh--hcCCCCcccCCCC-CCCchhHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHhhhhc---ccchhcch
Confidence 56778888877 467773 22222 46789999999999988432 112567999999999999865 55543211
Q ss_pred CC---CCCCCCCCCCCCCCCChhhhHHHHHHHHHhccccccccCCCC---ChHHHHHHHHHHHhccccCCCccccccCCC
Q 043885 469 HE---FQEGWPFSSLDNGWIATDTTAEGLNVSVLLSEMSYDLVGEAI---PLNRLFEAVNVVLSLQNSSGGVASYERTRS 542 (765)
Q Consensus 469 ~~---~~GgW~fs~~~~~~pd~D~TA~aL~aL~~l~~~~~~~~g~~~---~~~~l~~av~~Lls~Qn~dGGw~~~e~~~~ 542 (765)
-. .+||-.-. -.++-.||.++.||+.......+....+. ....+.+|++||....+. ++.
T Consensus 444 ~~~~~~~gg~~~~-----~~~~~ltAyvliaL~e~~~~~~~~~~~~~~~~~~~~i~ka~~~L~~~~~~--~~~------- 509 (767)
T 4fxk_B 444 VLDRSMQGGLVGN-----DETVALTAFVTIALHHGLAVFQDEGAEPLKQRVEASISKANSFLGEKASA--GLL------- 509 (767)
T ss_dssp SCCCCCCSSTTTH-----HHHHHHHHHHHHHHHHHHTTSTTCCCCSHHHHHHHHHHHHHHHHHHHTTS--CCC-------
T ss_pred hcchhhcCCcCCC-----ccchhHHHHHHHHHHhcCCccccchhhhhHhHHHHHHHHHHHHHHHHhhc--ccC-------
Confidence 11 11221100 01244689999999875432111111111 134688899998764332 111
Q ss_pred cchhhccccccccccccccCCccCcHHHHHHHHHhccCcCCccchhHHHHHHHHHHHHHHHhcC--CCCC-CCCCCC---
Q 043885 543 YAWMEMLNPVENFGESIIDYQYVECTSSTIQCLKSFTKHYPKHRRREIEEFIAKGANFIESIQR--PDGW-WYGSWG--- 616 (765)
Q Consensus 543 ~~~le~l~p~e~f~~~~~d~~~~d~Ta~~l~aL~~~~~~~p~~r~~~i~~~I~rAv~~L~~~Q~--~DGs-W~g~wg--- 616 (765)
.+...+.+.-||.+.+. +. .....+.+-|.+.-. .++. |...-+
T Consensus 510 ---------------------~~y~~Al~ayaL~l~~~--~~-------~~~~~~~~~L~~~a~~~~~~~~w~~~~~~~~ 559 (767)
T 4fxk_B 510 ---------------------GAHAAAITAYALSLTKA--PV-------DLLGVAHNNLMAMAQETGDNLYWGSVTGSQS 559 (767)
T ss_dssp ---------------------CHHHHHHHHHHHHHHTC--TT-------HHHHHHHHHHHTTCCBCSSCBCCCCCCCCCG
T ss_pred ---------------------CHHHHHHHHHHHHHcCC--cH-------HHHHHHHHHHHhhcEEcCCeeEEeccCCCcc
Confidence 00112333344555432 21 222333344444322 2222 311000
Q ss_pred -----------------CC---chhHHHHHHHHHHHcCCCCCChHHHHHHHHHHHhcccCCCccccccccccccccccCC
Q 043885 617 -----------------VC---FTYGTWFGIKGLVDSGRKYENSRSIRKACDFLLSKQLDSGGWGESYVSCVDRVYTNLE 676 (765)
Q Consensus 617 -----------------~~---~~YgT~~al~aL~aaG~~~~~~~~i~rav~~Lls~Q~~DGGWGes~~s~~~~~Y~~l~ 676 (765)
.. .+-.|+.+|.++...... .+.+.+.++||.+.||..|||+.
T Consensus 560 ~~~~~~~~~~~~~~~~~~~~s~~VEttayaLla~l~~~~~---~~~a~~iv~WL~~Qr~~~Ggf~S-------------- 622 (767)
T 4fxk_B 560 NAVSPTPAPRNPSDPMPQAPALWIETTAYALLHLLLHEGK---AEMADQASAWLTRQGSFQGGFRS-------------- 622 (767)
T ss_dssp GGGCCSSSCCCSSSCBCCCCHHHHHHHHHHHHHHHHHTSS---CHHHHHHHHHHHHTCCTTSSCSS--------------
T ss_pred cccccccccccccccccccchHHHHHHHHHHHHHHhcCCc---hhHHHHHHHHHHHhhcCCCCCcC--------------
Confidence 00 133588899888765433 45678999999999999999953
Q ss_pred CCCCcHHHHHHHHHHHHHh
Q 043885 677 GNKAHNVNTAWAMLALIEA 695 (765)
Q Consensus 677 g~~S~~~~TAwALlAL~~a 695 (765)
.-.|++||.||...
T Consensus 623 -----TQdTv~AL~ALa~y 636 (767)
T 4fxk_B 623 -----TQDTVIALDALSAY 636 (767)
T ss_dssp -----HHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHH
Confidence 24699999999764
No 39
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=98.27 E-value=2.7e-05 Score=100.84 Aligned_cols=227 Identities=11% Similarity=0.031 Sum_probs=133.1
Q ss_pred HHHHHHHHhhhheeccCCce-eeccCCCchhHHHHHHHHHHHcCCC-CcchHHHHHHHHHHHh-hccccCCCCCCccc--
Q 043885 392 YKHHLARIKDYLWVAEDGMK-MQAYNGSQLWDTAFAVHAILSTNLV-DEYGSMLKKANNYIKT-TQVRTKSFEDPSCW-- 466 (765)
Q Consensus 392 ~~~~l~~l~~~l~~~~dG~~-~q~~~gs~~WDTalai~AL~~ag~~-~~~~~~l~kA~~~L~~-~Q~~~~~~Gd~~~~-- 466 (765)
++.+++|+..| ...||.. .-+...+..|-||+++..|..+.-- .-....|.+|++||.+ .|..+ |.|...
T Consensus 1048 i~~g~~r~l~~--q~~dGsfs~w~~~~~s~wLTAyv~~~l~~A~~~~~v~~~~l~~a~~~L~~~~q~~~---g~f~~~~~ 1122 (1661)
T 2b39_A 1048 IRKGYTQQLAF--RQKSSAYAAFQYRPPSTWLTAYVVKVFALAANLIAIDSKDLCETVKWLILEKQKPD---GIFQEDGP 1122 (1661)
T ss_dssp HHHHHHHHHTT--BCTTSCBCSSTTSCCCHHHHHHHHHHHHHHTTTSCCCHHHHHHHHHHHHHHTBCTT---SCBCCCSC
T ss_pred HHHHHHHHHHh--hcCCCCccccCCCCCchhhhHHHHHHHHhhhhcccCCHHHHHHHHHHhhHhhCCCC---Cccccccc
Confidence 44566677666 4567732 1111245799999999999887421 1115789999999995 77764 665421
Q ss_pred -cCCCCCCCCCCCCCCCCCCChhhhHHHHHHHHHhccccccccCCCCChHHHHHHHHHHHhccccCCCccccccCCCcch
Q 043885 467 -YRHEFQEGWPFSSLDNGWIATDTTAEGLNVSVLLSEMSYDLVGEAIPLNRLFEAVNVVLSLQNSSGGVASYERTRSYAW 545 (765)
Q Consensus 467 -~~~~~~GgW~fs~~~~~~pd~D~TA~aL~aL~~l~~~~~~~~g~~~~~~~l~~av~~Lls~Qn~dGGw~~~e~~~~~~~ 545 (765)
+....+||..-. ..++...||.+|.||+....... .+.+.....+.+|++||.+.... +.
T Consensus 1123 ~~~~~~~gg~~~~----~~~~~~ltAyvl~aL~~~~~~~~--~~~~~~~~~i~~a~~yL~~~~~~---~~---------- 1183 (1661)
T 2b39_A 1123 VIHQEMIGGFRDT----REKDVSLTAFVLIALHEAKDICE--AQVNSLGRSIAKAGDFLENHYRE---LR---------- 1183 (1661)
T ss_dssp CCCTTSCCCTTCC----TTSSHHHHHHHHHHHHHTTTTTT--TTCSSHHHHHHHHHHHHHHHTTT---CC----------
T ss_pred eechhhcCCcccc----ccCccccHHHHHHHHHhcccccc--ccCcchhHHHHHHHHHHHHhhhc---cC----------
Confidence 111123443210 11345678999999987543210 01223567899999999764221 10
Q ss_pred hhccccccccccccccCCccCcHHHHHHHHHhccCcCCccchhHHHHHHHHHHHHHHHhcCCCCCCCCCCCC-CchhHHH
Q 043885 546 MEMLNPVENFGESIIDYQYVECTSSTIQCLKSFTKHYPKHRRREIEEFIAKGANFIESIQRPDGWWYGSWGV-CFTYGTW 624 (765)
Q Consensus 546 le~l~p~e~f~~~~~d~~~~d~Ta~~l~aL~~~~~~~p~~r~~~i~~~I~rAv~~L~~~Q~~DGsW~g~wg~-~~~YgT~ 624 (765)
.+...+.+..||.+.++. . +++++.|.+.......|....+. ..+-.|+
T Consensus 1184 ------------------~~y~~A~layAL~l~g~~-----a-------~~~l~~L~~~~~~~~~W~~~~~~~~~vE~ta 1233 (1661)
T 2b39_A 1184 ------------------RPYTVAIAAYALALLGKL-----E-------GDRLTKFLNTAKEKNRWEEPNQKLYNVEATS 1233 (1661)
T ss_dssp ------------------SHHHHHHHHHHHHHTTCC-----C-------HHHHHHHHHHSBTTTBCCCSSCHHHHHHHHH
T ss_pred ------------------CHHHHHHHHHHHHHcCCc-----H-------HHHHHHHHhhccCCCCCCCCCCCcchHHHHH
Confidence 011123333455555431 1 22344455544433345322110 1234678
Q ss_pred HHHHHHHHcCCCCCChHHHHHHHHHHHhcccCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHHh
Q 043885 625 FGIKGLVDSGRKYENSRSIRKACDFLLSKQLDSGGWGESYVSCVDRVYTNLEGNKAHNVNTAWAMLALIEA 695 (765)
Q Consensus 625 ~al~aL~aaG~~~~~~~~i~rav~~Lls~Q~~DGGWGes~~s~~~~~Y~~l~g~~S~~~~TAwALlAL~~a 695 (765)
.+|.+|...+.. ..+.+.++||.+.|+.+|||+. .-.|+.||.||...
T Consensus 1234 yaLlall~~~~~----~~~~~iv~wL~~qr~~~gg~~S-------------------TqdT~~Al~AL~~y 1281 (1661)
T 2b39_A 1234 YALLALLARKDY----DTTPPVVRWLNEQRYYGGGYGS-------------------TQATFMVFQALAQY 1281 (1661)
T ss_dssp HHHHHHHHHTCT----TTSHHHHHHHHHCCTBTTBBCS-------------------HHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCh----hhHHHHHHHHHhcccCCCCccc-------------------chHHHHHHHHHHHH
Confidence 899999887653 2356788999999999999963 24689999999864
No 40
>2pmv_A Gastric intrinsic factor; cobalamin transport protein alpha6-alpha6 motif two domain P transport protein; HET: NAG B12; 2.60A {Homo sapiens} PDB: 3kq4_A*
Probab=98.24 E-value=2e-06 Score=94.12 Aligned_cols=119 Identities=14% Similarity=0.067 Sum_probs=87.9
Q ss_pred HHHHHHHHHhccCcCCccchhHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCchhHHHHHHHHHHHcCC---CC---C---
Q 043885 568 TSSTIQCLKSFTKHYPKHRRREIEEFIAKGANFIESIQRPDGWWYGSWGVCFTYGTWFGIKGLVDSGR---KY---E--- 638 (765)
Q Consensus 568 Ta~~l~aL~~~~~~~p~~r~~~i~~~I~rAv~~L~~~Q~~DGsW~g~wg~~~~YgT~~al~aL~aaG~---~~---~--- 638 (765)
-|..+.||+.++.. .-.+.|.-|...|+.||+++ .+-.++.|++||..++. .. .
T Consensus 117 ~sL~vLALC~~~~~-----------v~~~~v~kLl~~~~~~g~~~------sVDT~AMa~LAL~C~~~~~~~~~~~~~~~ 179 (399)
T 2pmv_A 117 PSLAILALCQKNSE-----------ATLPIAVRFAKTLLANSSPF------NVDTGAMATLALTCMYNKIPVGSEEGYRS 179 (399)
T ss_dssp HHHHHHHHHHHCHH-----------HHHHHHHHHHHHHHHCCSCC------CHHHHHHHHHHHHHHHTBCCTTCCSSHHH
T ss_pred HHHHHHHHHhcCCC-----------CCHHHHHHHHHHHHccCCcc------cchHHHHHHHHHHHHhhccccccchhhHH
Confidence 45778888887642 23445555666777776543 35577888888886654 21 1
Q ss_pred -ChHHHHHHHHHHHhcccCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHHhCCCCCCcH-HHHHHHHHHHhcC
Q 043885 639 -NSRSIRKACDFLLSKQLDSGGWGESYVSCVDRVYTNLEGNKAHNVNTAWAMLALIEAGQAHRDPT-PLHRAARVLINSQ 716 (765)
Q Consensus 639 -~~~~i~rav~~Lls~Q~~DGGWGes~~s~~~~~Y~~l~g~~S~~~~TAwALlAL~~aG~~~~d~~-~i~rav~~L~~~Q 716 (765)
...+|++++++|++.|++||+||. ...|+.||.||..++.... .+ ...+++++|++ |
T Consensus 180 ~i~~ai~~~~~~l~~~q~~dG~fGn-------------------~yST~LA~QAL~~~~~~~~-~~W~c~~al~~l~~-q 238 (399)
T 2pmv_A 180 LFGQVLKDIVEKISMKIKDNGIIGD-------------------IYSTGLAMQALSVTPEPSK-KEWNCKKTTDMILN-E 238 (399)
T ss_dssp HHHHHHHHHHHHHTTSBCTTSCBSS-------------------HHHHHHHHHHHHHCSSCCS-SCCCHHHHHHHHHH-H
T ss_pred HHHHHHHHHHHHHHHhhcCCCcccc-------------------cccHHHHHHHHHhcCCCcc-ccccHHHHHHHHHH-H
Confidence 167889999999999999999974 5789999999999987422 22 48889999999 9
Q ss_pred cCCCCCCC
Q 043885 717 MENGDFPQ 724 (765)
Q Consensus 717 ~~dG~w~~ 724 (765)
..||.|..
T Consensus 239 ~~~G~F~n 246 (399)
T 2pmv_A 239 IKQGKFHN 246 (399)
T ss_dssp HTTTTTCS
T ss_pred hhCCCcCC
Confidence 99999963
No 41
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=98.08 E-value=5.1e-05 Score=98.37 Aligned_cols=227 Identities=14% Similarity=0.067 Sum_probs=128.8
Q ss_pred HHHHHHHHhhhheeccCCce-eeccCCCchhHHHHHHHHHHHcCCC-CcchHHHHHHHHHHHh-hccccCCCCCCccccC
Q 043885 392 YKHHLARIKDYLWVAEDGMK-MQAYNGSQLWDTAFAVHAILSTNLV-DEYGSMLKKANNYIKT-TQVRTKSFEDPSCWYR 468 (765)
Q Consensus 392 ~~~~l~~l~~~l~~~~dG~~-~q~~~gs~~WDTalai~AL~~ag~~-~~~~~~l~kA~~~L~~-~Q~~~~~~Gd~~~~~~ 468 (765)
++.+++|+..| ...||.. .-+...+..|-||+++..|.++.-- .-....|.+|++||.+ .|..+ |.|....+
T Consensus 1049 i~~g~~r~l~~--q~~dGsfs~w~~~~~s~wLTAyv~~~l~~A~~~~~v~~~~l~~a~~~L~~~~q~~~---g~f~~~~~ 1123 (1676)
T 3cu7_A 1049 LKEGMLSIMSY--RNADYSYSVWKGGSASTWLTAFALRVLGQVNKYVEQNQNSICNSLLWLVENYQLDN---GSFKENSQ 1123 (1676)
T ss_dssp HHHHHHHGGGG--BCTTSCBCSSSSSCCCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHSBCTT---SCBCCCSS
T ss_pred HHHHHHHHhhc--cCCCCCccccCCCCCcEEEeHHHHHHHHHHHhcccCCHHHHHHHHHHHHHhhCCCC---CcccCCcc
Confidence 34455566665 4667721 1122245799999999999877311 1115789999999998 77754 66542111
Q ss_pred --C-CCCCCCCCCCCCCCCCChhhhHHHHHHHHHhccccccccCCCCChHHHHHHHHHHHhccccCCCccccccCCCcch
Q 043885 469 --H-EFQEGWPFSSLDNGWIATDTTAEGLNVSVLLSEMSYDLVGEAIPLNRLFEAVNVVLSLQNSSGGVASYERTRSYAW 545 (765)
Q Consensus 469 --~-~~~GgW~fs~~~~~~pd~D~TA~aL~aL~~l~~~~~~~~g~~~~~~~l~~av~~Lls~Qn~dGGw~~~e~~~~~~~ 545 (765)
| ..+||..-. ...++...||.+|.||+...... +.+.....+.+|++||.+.... +.
T Consensus 1124 ~~~~~~~gg~~~~---~~~~~~~ltAyvl~aL~~~~~~~----~~~~~~~~i~~a~~yL~~~~~~---~~---------- 1183 (1676)
T 3cu7_A 1124 YQPIKLQGTLPVE---ARENSLYLTAFTVIGIRKAFDIC----PLVKIDTALIKADNFLLENTLP---AQ---------- 1183 (1676)
T ss_dssp CCCCCCCSCHHHH---HHHHHHHHHHHHHHHHHHTGGGS----CCHHHHHHHHHHHHHHHHHHSS---CS----------
T ss_pred ccchhhcCCcccc---cccCccccHHHHHHHHHhccccc----CCcccHHHHHHHHHHHHHhhhc---cC----------
Confidence 0 011221100 00013346899999987653210 1112456889999999764221 10
Q ss_pred hhccccccccccccccCCccCcHHHHHHHHH--hccCcCCccchhHHHHHHHHHHHHHHHhcC-CCC-----CCCCC---
Q 043885 546 MEMLNPVENFGESIIDYQYVECTSSTIQCLK--SFTKHYPKHRRREIEEFIAKGANFIESIQR-PDG-----WWYGS--- 614 (765)
Q Consensus 546 le~l~p~e~f~~~~~d~~~~d~Ta~~l~aL~--~~~~~~p~~r~~~i~~~I~rAv~~L~~~Q~-~DG-----sW~g~--- 614 (765)
..-+.++.|.+ +.+. +. ...+++++.|.+... .++ .|...
T Consensus 1184 --------------------~~y~~A~lA~Al~l~g~--~~-------~~a~~~l~~L~~~a~~~~~~~~~~~w~~~~~~ 1234 (1676)
T 3cu7_A 1184 --------------------STFTLAISAYALSLGDK--TH-------PQFRSIVSALKREALVKGNPPIYRFWKDNLQH 1234 (1676)
T ss_dssp --------------------CHHHHHHHHHHHTTSCT--TC-------HHHHHHHHHHHHHCEEETTTTSEEECCSCSSC
T ss_pred --------------------CHHHHHHHHHHHHhcCC--ch-------hhHHHHHHHHHhhhhhccCCccccCCCCCCCC
Confidence 01234444443 3332 11 113344455555443 232 44321
Q ss_pred -------CCC-CchhHHHHHHHHHHHcCCCCCChHHHHHHHHHHHhcccCCCccccccccccccccccCCCCCCcHHHHH
Q 043885 615 -------WGV-CFTYGTWFGIKGLVDSGRKYENSRSIRKACDFLLSKQLDSGGWGESYVSCVDRVYTNLEGNKAHNVNTA 686 (765)
Q Consensus 615 -------wg~-~~~YgT~~al~aL~aaG~~~~~~~~i~rav~~Lls~Q~~DGGWGes~~s~~~~~Y~~l~g~~S~~~~TA 686 (765)
|+. ..+-.|+.+|.+|...+ +...+.+.++||.+.|+.+|||... -.|+
T Consensus 1235 ~~~~~~~~~~~~~ve~tayaLlall~~~----~~~~~~~iv~wL~~qr~~~Gg~~ST-------------------QdT~ 1291 (1676)
T 3cu7_A 1235 KDSSVPNTGTARMVETTAYALLTSLNLK----DINYVNPVIKWLSEEQRYGGGFYST-------------------QDTI 1291 (1676)
T ss_dssp CSSCCCSCCCHHHHHHHHHHHHHHHHTT----CHHHHHHHHHHHHHHSCSSSCCSTT-------------------TTHH
T ss_pred ccccccCCCccchHHHHHHHHHHHHhcC----ChhHHHHHHHHHHhccCCCCCcccc-------------------HHHH
Confidence 121 12335788999998875 2456788899999999999999642 2588
Q ss_pred HHHHHHHHh
Q 043885 687 WAMLALIEA 695 (765)
Q Consensus 687 wALlAL~~a 695 (765)
+||.||...
T Consensus 1292 ~Al~AL~~y 1300 (1676)
T 3cu7_A 1292 NAIEGLTEY 1300 (1676)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999864
No 42
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.97 E-value=0.00023 Score=79.61 Aligned_cols=327 Identities=12% Similarity=0.157 Sum_probs=184.4
Q ss_pred CCcHHHHHHHHHHhhhhee-------cc-CCceeecc----------C---CCchhHHHHHHHHHHHcCC---CCcchHH
Q 043885 387 PNSEAYKHHLARIKDYLWV-------AE-DGMKMQAY----------N---GSQLWDTAFAVHAILSTNL---VDEYGSM 442 (765)
Q Consensus 387 p~~~~~~~~l~~l~~~l~~-------~~-dG~~~q~~----------~---gs~~WDTalai~AL~~ag~---~~~~~~~ 442 (765)
.+.+.+++-+.+|.++|-. .. .|..+-.+ . ...-|+-++++.||.++.. .+++...
T Consensus 27 ~~~~~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~Gv~l~gl~~ay~~Tgd~kY~~y 106 (445)
T 3k11_A 27 LTPEQVKKDIDRVFAYIDKETPARVVDKNTGKVITDYTAMGDEAQLERGAFRLASYEWGVTYSALIAAAETTGDKRYTDY 106 (445)
T ss_dssp CCHHHHHHHHHHHHHHHHHTSCCCEEETTTCCEECCTTTCCTTEEECCCSSCTTSHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhccCcceeecCCCCceeccccccccccccccCCcccCccCHHHHHHHHHHHHHHHCCHHHHHH
Confidence 4556788888887765532 11 23221111 0 1123999999999988733 2345677
Q ss_pred HHHHHHHHHhh------ccccCCCCCCccccCCCCCCCCCCCCCCCCCCChhhhHHHHHHHHHhccccccccCCCCChHH
Q 043885 443 LKKANNYIKTT------QVRTKSFEDPSCWYRHEFQEGWPFSSLDNGWIATDTTAEGLNVSVLLSEMSYDLVGEAIPLNR 516 (765)
Q Consensus 443 l~kA~~~L~~~------Q~~~~~~Gd~~~~~~~~~~GgW~fs~~~~~~pd~D~TA~aL~aL~~l~~~~~~~~g~~~~~~~ 516 (765)
+++..+||.+. ++.++ |.....+++. +. + + -.||.+..+.+|+.+-+. .+.+...+.
T Consensus 107 a~~~~dfi~~~~p~~~~~~~~~--G~l~~~~r~~------~~--~-~--~LDD~g~~~~~Li~lY~~----T~d~~yl~~ 169 (445)
T 3k11_A 107 VQNRFRFLAEVAPHFKRVYEEK--GKTDSQLLQI------LT--P-H--ALDDAGAVCTAMIKLRLK----DESLPVDGL 169 (445)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH--SCCCHHHHHH------HS--C-C--SGGGTHHHHHHHHHHHHH----CTTCCCHHH
T ss_pred HHHHHHHHHhccchhhhhhhcc--CCeecccccc------cC--C-C--cchhHHHHHHHHHHHHHh----cCCHHHHHH
Confidence 88888888752 33332 4433223221 11 1 1 357778777777766432 356678899
Q ss_pred HHHHHHHHHhcc--ccCCCccccccCCCcchhhccccccccccccccCCccCcHHHHHHHHHhccCcCCccchhHHHHHH
Q 043885 517 LFEAVNVVLSLQ--NSSGGVASYERTRSYAWMEMLNPVENFGESIIDYQYVECTSSTIQCLKSFTKHYPKHRRREIEEFI 594 (765)
Q Consensus 517 l~~av~~Lls~Q--n~dGGw~~~e~~~~~~~le~l~p~e~f~~~~~d~~~~d~Ta~~l~aL~~~~~~~p~~r~~~i~~~I 594 (765)
+.+..+||+..| +++|||-.........| .|+--+++-.|..+++...+.+..-++.++
T Consensus 170 a~~~ad~L~~~~pRt~~Ggf~h~~~~~~q~W-------------------iD~lyM~~pfla~~~~~tgd~~~~y~d~A~ 230 (445)
T 3k11_A 170 IQNYFDFIINKEYRLADGTFARNRPQRNTLW-------------------LDDMFMGIPAVAQMSRYDKEAKNKYLAEAV 230 (445)
T ss_dssp HHHHHHHHHHTSCBCTTCCBCBCSSSTTEEE-------------------THHHHHHHHHHHHHHHHCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCceeecCCCCCceE-------------------ecchhhHHHHHHHHHHHHCCcchHHHHHHH
Confidence 999999999998 56899864222111111 244445555555554432211100234455
Q ss_pred HHHHHHHHHhcC-CCCCCCCCCC--------CCchhHHHHHHHHHHHcC----CCCC----ChHHHHHHHHHHHhcccCC
Q 043885 595 AKGANFIESIQR-PDGWWYGSWG--------VCFTYGTWFGIKGLVDSG----RKYE----NSRSIRKACDFLLSKQLDS 657 (765)
Q Consensus 595 ~rAv~~L~~~Q~-~DGsW~g~wg--------~~~~YgT~~al~aL~aaG----~~~~----~~~~i~rav~~Lls~Q~~D 657 (765)
+....+....+. .+|-|+-.|. .+..-|.++++.||...- ..+. -....++.++.|++.|.+|
T Consensus 231 ~q~~~~~~~l~D~~tGL~~Hg~~~~~~~~~~~~WaRGnGW~~~gl~~~l~~lp~~~~~r~~l~~~~~~~a~~l~~~Q~~~ 310 (445)
T 3k11_A 231 KQFLQFADRMFIPEKGLYRHGWVESSTDHPAFCWARANGWALLTACELLDVLPEDYPQRPKVMDYFRAHVRGVTALQSGE 310 (445)
T ss_dssp HHHHHHHHHHEETTTTEECSEEETTCSSCCCCCBHHHHHHHHHHHHHHHHHSCTTCTTHHHHHHHHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHhcccCCCCCEeeeecCCCCCCCcceecccchHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHhCCCC
Confidence 544445555553 4677764332 134558888888887431 1111 1267788899999999999
Q ss_pred CccccccccccccccccCCCCCCcHHHHHHHHHHH---HHhCCCCCC--cHHHHHHHHHHHhcCcCCCCCCCCcc-ccc-
Q 043885 658 GGWGESYVSCVDRVYTNLEGNKAHNVNTAWAMLAL---IEAGQAHRD--PTPLHRAARVLINSQMENGDFPQQEI-MGS- 730 (765)
Q Consensus 658 GGWGes~~s~~~~~Y~~l~g~~S~~~~TAwALlAL---~~aG~~~~d--~~~i~rav~~L~~~Q~~dG~w~~~~~-~g~- 730 (765)
|-|..... . . ++.-..+.||...-|| +..|..+.. ..+++||.+.|+++-.+||.-..-+. +|.
T Consensus 311 G~W~~vld-~-~-------~~y~EsSaTAmfaygllkgvr~G~Ld~~~Y~~~A~ka~~~L~~~i~~dG~l~~v~~gtg~g 381 (445)
T 3k11_A 311 GFWHQLLD-C-N-------DSYLETSATAIYVYCLAHAINKGWIDAIAYGPVAQLGWHAVAGKINEEGQVEGTCVGTGMA 381 (445)
T ss_dssp SCEESBTT-C-T-------TSCEEHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHTTBCTTSCBCSCBCCCCCC
T ss_pred CchhhccC-C-C-------CCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCCCCCEeceeeccCCC
Confidence 99974321 1 1 1222456665555455 444544211 14688999999998889997643332 122
Q ss_pred cCCccccccCCccc----hHH-HHHHHHHHHhc
Q 043885 731 FTRNCMISYSAWRN----IFP-IWALGAFYNRV 758 (765)
Q Consensus 731 f~~~~~~~Y~~Yr~----~fp-l~ALg~y~~~~ 758 (765)
....+|++-+.-.+ +=| |+|..++.+..
T Consensus 382 ~d~~~Y~~~p~~~~d~~G~G~fllA~~E~~~l~ 414 (445)
T 3k11_A 382 FDPAFYYYRPVNVYAAHGYGPVLWAGAEMIRLL 414 (445)
T ss_dssp SSHHHHHTCCBCTTCGGGHHHHHHHHHHHHHHH
T ss_pred CCchhhccCcccCCCCccHHHHHHHHHHHHHHh
Confidence 22234544443222 334 88888887654
No 43
>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*
Probab=97.55 E-value=1.1e-05 Score=103.39 Aligned_cols=124 Identities=15% Similarity=0.178 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCCC--CchhHHHHHHHHHHHcCCC-C-CChHHHHHHHHHHHh-cccCCCcccccc
Q 043885 590 IEEFIAKGANFIESIQRPDGWWYGSWGV--CFTYGTWFGIKGLVDSGRK-Y-ENSRSIRKACDFLLS-KQLDSGGWGESY 664 (765)
Q Consensus 590 i~~~I~rAv~~L~~~Q~~DGsW~g~wg~--~~~YgT~~al~aL~aaG~~-~-~~~~~i~rav~~Lls-~Q~~DGGWGes~ 664 (765)
....|+.|..-+.+.|++|||| +.|+. ..++-|++++..|..|..- + -+...+.++++||++ +|++||.|.+..
T Consensus 1028 a~~~i~~Gyqr~l~yq~~DGsf-s~w~~~~~stWLTAyV~k~f~~A~~~i~~Vd~~~l~~~~~wL~~~~Q~~dG~F~e~~ 1106 (1642)
T 3prx_B 1028 AVNQIVTGYAQQMVYKKADHSY-AAFTNRASSSWLTAYVVKVFAMAAKMVAGISHEIICGGVRWLILNRQQPDGAFKENA 1106 (1642)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHhcCCCCCe-ecCCCCCCccccHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHhhccCCCCcccccc
Confidence 3456778888888899999997 45653 4577899999999876442 2 357899999999998 899999998764
Q ss_pred cccccccccc-CCCCCCcHHHHHHHHHHHHHhCCCC-----CCcHHHHHHHHHHHhc
Q 043885 665 VSCVDRVYTN-LEGNKAHNVNTAWAMLALIEAGQAH-----RDPTPLHRAARVLINS 715 (765)
Q Consensus 665 ~s~~~~~Y~~-l~g~~S~~~~TAwALlAL~~aG~~~-----~d~~~i~rav~~L~~~ 715 (765)
.-.. ....+ +.|..+++.-||++|.||..++... ....++.+|+.||.++
T Consensus 1107 ~v~~-~~m~Gg~~~~~~~~~lTA~vliaL~e~~~~~~~~~~~~~~~i~~a~~~L~~~ 1162 (1642)
T 3prx_B 1107 PVLS-GTMQGGIQGAEEEVYLTAFILVALLESKTICNDYVNSLDSSIKKATNYLLKK 1162 (1642)
T ss_dssp ---------------------------------------------------------
T ss_pred cccc-hhccCCccCCCCcccchHHHHHHHHhcccccccccccchHHHHHHHHHHHHh
Confidence 2111 11111 1112457889999999999987531 1123699999999874
No 44
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=97.16 E-value=0.02 Score=62.91 Aligned_cols=284 Identities=14% Similarity=0.115 Sum_probs=156.1
Q ss_pred CCchhHHHHHHHHHHHcCC-CCcchHHHHHHHHHHHhhccccCCCCCCccccCCCCCCCCCCCCCCCCCCChhhhHHHHH
Q 043885 417 GSQLWDTAFAVHAILSTNL-VDEYGSMLKKANNYIKTTQVRTKSFEDPSCWYRHEFQEGWPFSSLDNGWIATDTTAEGLN 495 (765)
Q Consensus 417 gs~~WDTalai~AL~~ag~-~~~~~~~l~kA~~~L~~~Q~~~~~~Gd~~~~~~~~~~GgW~fs~~~~~~pd~D~TA~aL~ 495 (765)
.+--|..++.+.+|..+.- ..+ ..-++.|.+|.... +.++ |. . . ..|+.+..+
T Consensus 64 ~~W~Wt~G~~~~gl~~~ye~Tgd-~~y~~~a~~~~~~~-~~~~--~~--------------~--~-----n~D~~~~~~- 117 (382)
T 3pmm_A 64 AGWEWTHGVGLYGIYQYYQQTGD-IEMRDIIDRWFADR-FAEG--AT--------------T--K-----NVNTMAPFL- 117 (382)
T ss_dssp TSCSHHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHH-HHHC--CC--------------C--C-----CTTTTTTHH-
T ss_pred cCccccHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHH-HcCC--CC--------------c--C-----cccchHHHH-
Confidence 4556889999999887532 222 34455555566533 2221 11 0 0 122222222
Q ss_pred HHHHhccccccccCCCCChHHHHHHHHHHHhcc--ccCCCccccccCCCcchhhccccccccccccccCCccCcHHHHHH
Q 043885 496 VSVLLSEMSYDLVGEAIPLNRLFEAVNVVLSLQ--NSSGGVASYERTRSYAWMEMLNPVENFGESIIDYQYVECTSSTIQ 573 (765)
Q Consensus 496 aL~~l~~~~~~~~g~~~~~~~l~~av~~Lls~Q--n~dGGw~~~e~~~~~~~le~l~p~e~f~~~~~d~~~~d~Ta~~l~ 573 (765)
+++.+-+ ..|++...+.+.+..++|+..+ .++|||.....+. .++...+ .|...+.+.
T Consensus 118 ~l~~lY~----~Tgd~~Yl~~a~~~ad~L~~~~~r~~~Ggf~~~~~~~-------~~~~~~W---------iDgl~M~~p 177 (382)
T 3pmm_A 118 TLAYRFE----ETGRMAYLPWLESWAEWAMHEMPRTEQGGMQHMTLAE-------ENHQQMW---------DDTLMMTVL 177 (382)
T ss_dssp HHHHHHH----HHCCGGGHHHHHHHHHHHHHTSCBCGGGCBCCCCSSC-------CCTTEEE---------TTHHHHTHH
T ss_pred HHHHHHH----HhCCHHHHHHHHHHHHHHHhhCCCCcCCCeeeecCCC-------CCCCcEE---------ecchhhhHH
Confidence 2333221 1366678888888899998765 4589885332110 0011111 232233444
Q ss_pred HHHhccCcCCccchhHHHHHHHHHHHHHHHhcC-CCCCCCCCC---------CCCchhHHHHHHHHHHHcC----CCCC-
Q 043885 574 CLKSFTKHYPKHRRREIEEFIAKGANFIESIQR-PDGWWYGSW---------GVCFTYGTWFGIKGLVDSG----RKYE- 638 (765)
Q Consensus 574 aL~~~~~~~p~~r~~~i~~~I~rAv~~L~~~Q~-~DGsW~g~w---------g~~~~YgT~~al~aL~aaG----~~~~- 638 (765)
.|..+.+...+ .+-++.+++....+....+. ++|-|+-.| ..+-.-|.++++.||...- .+..
T Consensus 178 ~La~~~~~tgd--~~y~d~A~~q~~~~~~~l~D~~tGl~~h~~~~~~~~~~~~~~WaRG~gW~~~gl~~~l~~l~~p~~~ 255 (382)
T 3pmm_A 178 PLAKIGKLLNR--PQYVEEATYQFLLHVQNLMDRETGLWFHGWNYEGRHNFARARWARGNSWLTMVIPDFLELVDLPEGN 255 (382)
T ss_dssp HHHHHHHHTTC--HHHHHHHHHHHHHHHHHHBCTTTSCBCSEEETTTTBCTTCCCBHHHHHHHHHHHHHHHHHHCCCTTC
T ss_pred HHHHHHHHHCC--HHHHHHHHHHHHHHHHHccCCCCCCeeeeccCCCCCCCCcceecccccHHHHHHHHHHHhhcCCcch
Confidence 44444332111 12244556666666667774 568886443 1233457888888887431 2211
Q ss_pred -----ChHHHHHHHHHHHhcccCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHH---hCCCCC-CcHHHHHHH
Q 043885 639 -----NSRSIRKACDFLLSKQLDSGGWGESYVSCVDRVYTNLEGNKAHNVNTAWAMLALIE---AGQAHR-DPTPLHRAA 709 (765)
Q Consensus 639 -----~~~~i~rav~~Lls~Q~~DGGWGes~~s~~~~~Y~~l~g~~S~~~~TAwALlAL~~---aG~~~~-d~~~i~rav 709 (765)
-....++.+++|++.|.+||-|..... .++ .| -..+.||...-||+. .|..+. -.++++|+.
T Consensus 256 ~~~~~~~~~~~~~a~~~~~~q~~~G~W~~~~d-~~~-~y-------~EsSatA~~ay~ll~~~~~g~l~~~Y~~~a~ka~ 326 (382)
T 3pmm_A 256 AVRRYLITVLDAQIAALAECQDDSGLWHTLLD-DPH-SY-------LEASATAGFAYGILKAVRKRYVGQHYAGVAEKAI 326 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCTTSCEESBTT-CTT-SC-------EEHHHHHHHHHHHHHHHHTTSSCGGGHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCCCChhhccC-CCC-CC-------ccccHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 125677889999999999999974321 111 12 245667665555544 333321 124789999
Q ss_pred HHHHhcCcCCCCCCCCccccccCC---ccccc----cCCccchHHHHHHHHHHHhc
Q 043885 710 RVLINSQMENGDFPQQEIMGSFTR---NCMIS----YSAWRNIFPIWALGAFYNRV 758 (765)
Q Consensus 710 ~~L~~~Q~~dG~w~~~~~~g~f~~---~~~~~----Y~~Yr~~fpl~ALg~y~~~~ 758 (765)
+-|+++-.+||....-+ .|+..+ .+|++ -..|-+-.-|+|+.++.+.+
T Consensus 327 ~~l~~~i~~dG~l~~v~-~gt~~g~~~~~Y~~~p~~~~~~G~~~~lla~~e~~~~~ 381 (382)
T 3pmm_A 327 RGIVQNISPQGELLQTS-FGTGMGSDLDFYRQIPLTSMPYGQAMAILCLTEYLRKY 381 (382)
T ss_dssp HHHHHTBCTTSCBCSCB-CCCCCCSSHHHHHTCCBCCCHHHHHHHHHHHHHHHGGG
T ss_pred HHHHhhCCCCCCEeCee-cCCCCCCChhhhhcccCCCCCccHHHHHHHHHHHHHhh
Confidence 99999989999865433 233222 12222 23577888999999998754
No 45
>3sdr_A Alpha-bisabolene synthase; lyase, terpene synthase; HET: 210; 1.86A {Abies grandis} PDB: 3sdq_A 3sae_A* 3sdt_A* 3sdu_A* 3sdv_A*
Probab=97.08 E-value=0.014 Score=69.96 Aligned_cols=87 Identities=14% Similarity=0.140 Sum_probs=57.3
Q ss_pred CCCCccccCCCCCcchHHHHHHH-HHhcCCCCCCCHHHHHHHHHHHHhccCCCCccccccC--CCcchhhhHHHHHHHHH
Q 043885 115 EDGFWPGDYAGPLFLLPCLVIGL-YITGDLNTILQVEYRREMLRYLYNHQNEDGGWGLHIE--GESTMLNTVLSYVGLRL 191 (765)
Q Consensus 115 ~DG~W~~~~~g~~~~~~~~vial-~~~g~~~~~~~~~~~~~~~ryl~~~Qn~DGGWgl~~~--~~s~m~~Tv~~Y~aLrl 191 (765)
.|| |.++.+..+.-|+= | |+ .-.+... .+...+.++||+++|.+|||||.... ..-.+..|.-|-+||+-
T Consensus 72 ~~g-~~g~~S~S~YDTAW-V-Amvp~~~~~~----~p~Fp~~~~wil~nQ~~DGsWg~~~~~~~~d~ll~TlAcvlAL~~ 144 (817)
T 3sdr_A 72 TGD-GESMITPSAYDTAW-V-ARVPAIDGSA----RPQFPQTVDWILKNQLKDGSWGIQSHFLLSDRLLATLSCVLVLLK 144 (817)
T ss_dssp TSS-CCCCCCCCHHHHHH-H-HTCBCTTSCS----SBSSHHHHHHHHHCCCTTSCCSCTTCCCHHHHHHHHHHHHHHHHH
T ss_pred CCC-CCcccccCHHHhhH-H-heeecCCCCC----CCCchHHHHHHHHccCCCCCCCCCCCcchHHHHHHHHHHHHHHHH
Confidence 677 55666666666765 2 22 1111111 12346789999999999999994321 12247778778899988
Q ss_pred cCCCCCCCchHHHHHHHHHHh
Q 043885 192 LGERMDGGDGAIEKARKWILG 212 (765)
Q Consensus 192 lG~~~~~~~~~~~rAr~~Il~ 212 (765)
-+.. .+++.||.+||.+
T Consensus 145 w~~~----~~~i~~Gl~fl~~ 161 (817)
T 3sdr_A 145 WNVG----DLQVEQGIEFIKS 161 (817)
T ss_dssp TTCC----HHHHHHHHHHHHH
T ss_pred ccCC----HHHHHHHHHHHHH
Confidence 6543 3679999999995
No 46
>3sdr_A Alpha-bisabolene synthase; lyase, terpene synthase; HET: 210; 1.86A {Abies grandis} PDB: 3sdq_A 3sae_A* 3sdt_A* 3sdu_A* 3sdv_A*
Probab=96.92 E-value=0.0011 Score=79.19 Aligned_cols=105 Identities=13% Similarity=0.105 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHhcC---CCCCCCCCCCCCchhHHHHHHHHHHHcCCCCCChHHHHHHHHHHHhcccCCCccccccccccc
Q 043885 593 FIAKGANFIESIQR---PDGWWYGSWGVCFTYGTWFGIKGLVDSGRKYENSRSIRKACDFLLSKQLDSGGWGESYVSCVD 669 (765)
Q Consensus 593 ~I~rAv~~L~~~Q~---~DGsW~g~wg~~~~YgT~~al~aL~aaG~~~~~~~~i~rav~~Lls~Q~~DGGWGes~~s~~~ 669 (765)
.+++-++-+++... .|| +.|. -.+..|-|+++ |++-.- .....+.-.+.++||+..|.+|||||.....
T Consensus 55 ~~~~Lie~VK~~l~~~~~~g-~~g~-~S~S~YDTAWV--Amvp~~-~~~~~p~Fp~~~~wil~nQ~~DGsWg~~~~~--- 126 (817)
T 3sdr_A 55 RAEVLVSEIKAMLNPAITGD-GESM-ITPSAYDTAWV--ARVPAI-DGSARPQFPQTVDWILKNQLKDGSWGIQSHF--- 126 (817)
T ss_dssp HHHHHHHHHHHHHHHHHTSS-CCCC-CCCCHHHHHHH--HTCBCT-TSCSSBSSHHHHHHHHHCCCTTSCCSCTTCC---
T ss_pred HHHHHHHHHHHHhccccCCC-CCcc-cccCHHHhhHH--heeecC-CCCCCCCchHHHHHHHHccCCCCCCCCCCCc---
Confidence 34444444444433 566 3232 23679999994 554221 1112344568899999999999999864110
Q ss_pred cccccCCCCCCcHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHhc
Q 043885 670 RVYTNLEGNKAHNVNTAWAMLALIEAGQAHRDPTPLHRAARVLINS 715 (765)
Q Consensus 670 ~~Y~~l~g~~S~~~~TAwALlAL~~aG~~~~d~~~i~rav~~L~~~ 715 (765)
.. .-.+.+|..||+||..-+. .+..++||+.||.+.
T Consensus 127 ~~-------~d~ll~TlAcvlAL~~w~~---~~~~i~~Gl~fl~~n 162 (817)
T 3sdr_A 127 LL-------SDRLLATLSCVLVLLKWNV---GDLQVEQGIEFIKSN 162 (817)
T ss_dssp CH-------HHHHHHHHHHHHHHHHTTC---CHHHHHHHHHHHHHH
T ss_pred ch-------HHHHHHHHHHHHHHHHccC---CHHHHHHHHHHHHHH
Confidence 00 1137899999999999653 356899999999985
No 47
>3s9v_A Abietadiene synthase, chloroplastic; alpha bundle/barrel, lyase, isomerase; 2.30A {Abies grandis}
Probab=96.82 E-value=0.026 Score=67.25 Aligned_cols=90 Identities=16% Similarity=0.229 Sum_probs=56.8
Q ss_pred HHHHHHHHHhcCC-CCCCCCCCCCCchhHHHHHHHHHHHcCCCCCChHHHHHHHHHHHhcccCCC-cccccccccccccc
Q 043885 595 AKGANFIESIQRP-DGWWYGSWGVCFTYGTWFGIKGLVDSGRKYENSRSIRKACDFLLSKQLDSG-GWGESYVSCVDRVY 672 (765)
Q Consensus 595 ~rAv~~L~~~Q~~-DGsW~g~wg~~~~YgT~~al~aL~aaG~~~~~~~~i~rav~~Lls~Q~~DG-GWGes~~s~~~~~Y 672 (765)
.+|++||.+.++. +|+-...|.+ ..+.....|-.|...|..+.-.+.|+.+.+.+.+.-...| ||+..
T Consensus 245 ~~~~~YL~~~~~~~~g~VP~~yP~-d~~e~l~lID~LqrLGi~~hF~~EI~~~L~~i~~~~~~~gi~~~~~--------- 314 (785)
T 3s9v_A 245 KKCLDFLNFVLKKFGNHVPCHYPL-DLFERLWAVDTVERLGIDRHFKEEIKEALDYVYSHWDERGIGWARE--------- 314 (785)
T ss_dssp HHHHHHHHHHHHHHSSCCCSSCCC-HHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTCCTTCCCSSTT---------
T ss_pred hhHHHHHHHHHHhcCCCCCCcCCC-cHHHHHHHHHHHHHcCCccccHHHHHHHHHHHHHHhhhcccccccc---------
Confidence 5666777766554 3433333433 2355677888889999987667899999999986544444 45421
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHhCCC
Q 043885 673 TNLEGNKAHNVNTAWAMLALIEAGQA 698 (765)
Q Consensus 673 ~~l~g~~S~~~~TAwALlAL~~aG~~ 698 (765)
+...+...||.+...|...|..
T Consensus 315 ----~~~~Dl~~tAl~FRlLR~~Gy~ 336 (785)
T 3s9v_A 315 ----NPVPDIDDTAMGLRILRLHGYN 336 (785)
T ss_dssp ----CSSCCHHHHHHHHHHHHHTTCC
T ss_pred ----CCCCCHHHHHHHHHHHHhcCCC
Confidence 1124566677777777766643
No 48
>3p5p_A Taxadiene synthase; class I and II terpene cyclase fold, diterpene cyclase, DDXX NSE/DTE motif, 3-azacopalyl diphosphate; HET: A3C; 1.82A {Taxus brevifolia} PDB: 3p5r_A*
Probab=96.82 E-value=0.0049 Score=73.32 Aligned_cols=256 Identities=14% Similarity=0.129 Sum_probs=136.7
Q ss_pred HHHHHHHHhhhheeccCCceeeccCCCchhHHHHHHHHHHHcC-CCCcchHHHHHHHHHHHhhccccCCCCCCccccCCC
Q 043885 392 YKHHLARIKDYLWVAEDGMKMQAYNGSQLWDTAFAVHAILSTN-LVDEYGSMLKKANNYIKTTQVRTKSFEDPSCWYRHE 470 (765)
Q Consensus 392 ~~~~l~~l~~~l~~~~dG~~~q~~~gs~~WDTalai~AL~~ag-~~~~~~~~l~kA~~~L~~~Q~~~~~~Gd~~~~~~~~ 470 (765)
++..+++|+..+-.-.+|. + ..+++|||++ |++..- ....-.|....+++||++.|..+ |
T Consensus 10 ~~~~~~~i~~~~~~~~~g~-~----S~S~YDTAWV--amvp~~~~~~~~~p~Fp~~~~wil~nQ~~D---G--------- 70 (764)
T 3p5p_A 10 ADELVVKIKDMFNALGDGD-I----SPSAYDTAWV--ARLATISSDGSEKPRFPQALNWVFNNQLQD---G--------- 70 (764)
T ss_dssp HHHHHHHHHHHHHTCSSCC-C----CCCHHHHHHH--HHCEEECTTSCEEESCHHHHHHHHHCCCTT---S---------
T ss_pred HHHHHHHHHHHHhcCCCCc-c----cCcHHHHHHH--HhCccccCCCCCCCCChHHHHHHHHccCCC---C---------
Confidence 4445566655432112331 2 4568999995 444221 01112467788999999999875 4
Q ss_pred CCCCCCCCCCCCCCCChhh---hHHHHHHHHHhccccccccCCCCChHHHHHHHHHHHhccccCCCccccccCCCcchhh
Q 043885 471 FQEGWPFSSLDNGWIATDT---TAEGLNVSVLLSEMSYDLVGEAIPLNRLFEAVNVVLSLQNSSGGVASYERTRSYAWME 547 (765)
Q Consensus 471 ~~GgW~fs~~~~~~pd~D~---TA~aL~aL~~l~~~~~~~~g~~~~~~~l~~av~~Lls~Qn~dGGw~~~e~~~~~~~le 547 (765)
+|+-. .+.+..|+ |..|+.||.... +.++++.+|+.+|.+.- ..|. +....+-..|
T Consensus 71 ---sWg~~---~~~~~~d~ll~TlAcvlAL~~w~----------~~~~~i~~Gl~fl~~nl---~~~~--~~~~~~vgfe 129 (764)
T 3p5p_A 71 ---SWGIE---SHFSLCDRLLNTTNSVIALSVWK----------TGHSQVQQGAEFIAENL---RLLN--EEDELSPDFQ 129 (764)
T ss_dssp ---CCSCT---TSCCHHHHHHHHHHHHHHHHHTT----------CCHHHHHHHHHHHHHHH---TTCC--TTSCCCTTHH
T ss_pred ---CCCCC---CCcchHHHHHHHHHHHHHHHHcc----------CCHHHHHHHHHHHHHHH---Hhhc--CCCCCCceee
Confidence 45421 11234455 566666665431 24589999999997653 2232 1233333444
Q ss_pred ccccc--cccccccccCCccCcHH-HHHHHH-----HhccCcCCccchh--HHHHHHHHHHHH--HHHhcCCCCCCCCCC
Q 043885 548 MLNPV--ENFGESIIDYQYVECTS-STIQCL-----KSFTKHYPKHRRR--EIEEFIAKGANF--IESIQRPDGWWYGSW 615 (765)
Q Consensus 548 ~l~p~--e~f~~~~~d~~~~d~Ta-~~l~aL-----~~~~~~~p~~r~~--~i~~~I~rAv~~--L~~~Q~~DGsW~g~w 615 (765)
.+=|+ +......++.++. .+. ..|.++ ..+.....+++.. -.-+.+...++| +.+.|..|||...
T Consensus 130 iifP~ll~~a~~~gl~~p~~-~~~~~~l~~~r~~kL~~~~~~~~~~p~~llhslE~~~~~~d~~~~~~~~~~~GS~~~-- 206 (764)
T 3p5p_A 130 IIFPALLQKAKALGINLPYD-LPFIKYLSTTREARLTDVSAAADNIPANMLNALEGLEEVIDWNKIMRFQSKDGSFLS-- 206 (764)
T ss_dssp HHHHHHHHHHHHTTCCCCTT-SHHHHHHHHHHHHHHHHHHTSTTSSCGGGGGGGGGSGGGCCTTGGGGGBCTTSCBTT--
T ss_pred eeHHHHHHHHHHcCCCCCCC-chhHHHHHHhHHHHHhcCchhhcCCCchHHHHHHhccccccHHHHHhccCCCCCccc--
Confidence 44331 1111112232221 111 122222 1111110011100 011233444677 7788999999753
Q ss_pred CCCchhHHHHHHHHHHHcCCCCCChHHHHHHHHHHHhcccCCCc-cccccccccccccccCCCCCCcHHHHHHHHHHHHH
Q 043885 616 GVCFTYGTWFGIKGLVDSGRKYENSRSIRKACDFLLSKQLDSGG-WGESYVSCVDRVYTNLEGNKAHNVNTAWAMLALIE 694 (765)
Q Consensus 616 g~~~~YgT~~al~aL~aaG~~~~~~~~i~rav~~Lls~Q~~DGG-WGes~~s~~~~~Y~~l~g~~S~~~~TAwALlAL~~ 694 (765)
..-.|+.+++. .| + .++.+||.+.++.-|| -.. .| +.++....|.+-.|..
T Consensus 207 ---SPsaTAa~l~~---~~----d----~~~~~YL~~~~~~~~g~VP~--------~y------P~d~~e~l~lID~Lqr 258 (764)
T 3p5p_A 207 ---SPASTACVLMN---TG----D----EKCFTFLNNLLDKFGGCVPC--------MY------SIDLLERLSLVDNIEH 258 (764)
T ss_dssp ---BHHHHHHHHHH---HC----C----HHHHHHHHHHHHHHTSCCCS--------SC------CCHHHHHHHHHHHHHH
T ss_pred ---ChHHHHHHHHh---CC----C----hhHHHHHHHHHHhcCCCCCC--------cC------CCcHHHHHHHHHHHHH
Confidence 34578777643 33 1 4789999987776444 322 12 3578899999999999
Q ss_pred hCCCCCCcHHHHHHHHHHHhcCcC
Q 043885 695 AGQAHRDPTPLHRAARVLINSQME 718 (765)
Q Consensus 695 aG~~~~d~~~i~rav~~L~~~Q~~ 718 (765)
.|....=.+.|+..++.+-+.-.+
T Consensus 259 LGi~~hF~~EI~~~L~~i~~~~~~ 282 (764)
T 3p5p_A 259 LGIGRHFKQEIKGALDYVYRHWSE 282 (764)
T ss_dssp HTCGGGGHHHHHHHHHHHHHTCCT
T ss_pred cCCccccHHHHHHHHHHHHHHhhh
Confidence 997532124688999988764433
No 49
>3s9v_A Abietadiene synthase, chloroplastic; alpha bundle/barrel, lyase, isomerase; 2.30A {Abies grandis}
Probab=96.77 E-value=0.0023 Score=76.22 Aligned_cols=83 Identities=16% Similarity=0.268 Sum_probs=57.9
Q ss_pred CCchhHHHHHHHHHHHcCCCCCChHHHHHHHHHHHhcccCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHHhC
Q 043885 617 VCFTYGTWFGIKGLVDSGRKYENSRSIRKACDFLLSKQLDSGGWGESYVSCVDRVYTNLEGNKAHNVNTAWAMLALIEAG 696 (765)
Q Consensus 617 ~~~~YgT~~al~aL~aaG~~~~~~~~i~rav~~Lls~Q~~DGGWGes~~s~~~~~Y~~l~g~~S~~~~TAwALlAL~~aG 696 (765)
.+..|-|+++ |++-.- .....+.-.+.++||+..|.+|||||..... ..| -.+.+|..||+||..-+
T Consensus 53 S~S~YDTAWV--amvp~~-~~~~~p~Fp~~~~wil~nQ~~DGsWg~~~~~---~~~-------d~l~~TlAcvlAL~~w~ 119 (785)
T 3s9v_A 53 NPSAYDTAWV--ARIPAV-DGSDNPHFPETVEWILQNQLKDGSWGEGFYF---LAY-------DRILATLACIITLTLWR 119 (785)
T ss_dssp CCCHHHHHHH--TTSBCT-TSCSSBSSHHHHHHHHHCCCTTSCCSCSSSC---CHH-------HHHHHHHHHHHHHHHTT
T ss_pred cCcHHHhhHH--hccccC-CCCCCCCchHHHHHHHHccCCCCCCCCCCCC---chH-------HHHHHHHHHHHHHHHcc
Confidence 3679999995 444211 1112344468999999999999999864110 001 12789999999999965
Q ss_pred CCCCCcHHHHHHHHHHHhc
Q 043885 697 QAHRDPTPLHRAARVLINS 715 (765)
Q Consensus 697 ~~~~d~~~i~rav~~L~~~ 715 (765)
. .+..++||+.||.+.
T Consensus 120 ~---~~~~i~~Gl~fl~~n 135 (785)
T 3s9v_A 120 T---GETQVQKGIEFFRTQ 135 (785)
T ss_dssp C---CHHHHHHHHHHHHHH
T ss_pred c---CHHHHHHHHHHHHHH
Confidence 3 356899999999864
No 50
>3pya_A ENT-copalyl diphosphate synthase, chloroplastic; class I and II terpene cyclase fold, class II diterpene CYCL DXXDD motif; HET: AG8 1PE; 2.25A {Arabidopsis thaliana} PDB: 3pyb_A*
Probab=96.60 E-value=0.0034 Score=73.97 Aligned_cols=81 Identities=20% Similarity=0.360 Sum_probs=57.5
Q ss_pred CCchhHHHHHHHHHHHcCCCCCChHHHHHHHHHHHhcccCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHHhC
Q 043885 617 VCFTYGTWFGIKGLVDSGRKYENSRSIRKACDFLLSKQLDSGGWGESYVSCVDRVYTNLEGNKAHNVNTAWAMLALIEAG 696 (765)
Q Consensus 617 ~~~~YgT~~al~aL~aaG~~~~~~~~i~rav~~Lls~Q~~DGGWGes~~s~~~~~Y~~l~g~~S~~~~TAwALlAL~~aG 696 (765)
.+..|-|+++ |++-. . ...+.-.+.++||+..|.+|||||..... .. .-.+.+|..||+||..-+
T Consensus 31 S~S~YDTAWV--Amvp~--~-~~~p~Fp~~~~wil~nQ~~DGsWG~~~~~---~~-------~D~ll~TLAcvlAL~~w~ 95 (727)
T 3pya_A 31 TISAYDTAWV--ALIDA--G-DKTPAFPSAVKWIAENQLSDGSWGDAYLF---SY-------HDRLINTLACVVALRSWN 95 (727)
T ss_dssp CCCHHHHHHH--HTCBC--S-SSSBSCHHHHHHHHHTCCTTSCCSCSSSC---CH-------HHHHHHHHHHHHHHHHTT
T ss_pred cCcHHHhHHH--hhccC--C-CCCCCCHHHHHHHHhcCCCCCCCCCCCCc---ch-------hhHHHHHHHHHHHHHHcc
Confidence 3679999995 55432 1 12233467899999999999999864100 00 013689999999999865
Q ss_pred CCCCCcHHHHHHHHHHHhc
Q 043885 697 QAHRDPTPLHRAARVLINS 715 (765)
Q Consensus 697 ~~~~d~~~i~rav~~L~~~ 715 (765)
. .+..++||+.||.+.
T Consensus 96 ~---~~~~i~rGl~fl~~n 111 (727)
T 3pya_A 96 L---FPHQCNKGITFFREN 111 (727)
T ss_dssp C---CHHHHHHHHHHHHHH
T ss_pred C---CHHHHHHHHHHHHHH
Confidence 3 356899999999874
No 51
>3pya_A ENT-copalyl diphosphate synthase, chloroplastic; class I and II terpene cyclase fold, class II diterpene CYCL DXXDD motif; HET: AG8 1PE; 2.25A {Arabidopsis thaliana} PDB: 3pyb_A*
Probab=96.57 E-value=0.098 Score=61.72 Aligned_cols=257 Identities=15% Similarity=0.154 Sum_probs=134.1
Q ss_pred cHHHHHHHHHHhhhheeccCCceeeccCCCchhHHHHHHHHHHHcCCCCcchHHHHHHHHHHHhhccccCCCCCCccccC
Q 043885 389 SEAYKHHLARIKDYLWVAEDGMKMQAYNGSQLWDTAFAVHAILSTNLVDEYGSMLKKANNYIKTTQVRTKSFEDPSCWYR 468 (765)
Q Consensus 389 ~~~~~~~l~~l~~~l~~~~dG~~~q~~~gs~~WDTalai~AL~~ag~~~~~~~~l~kA~~~L~~~Q~~~~~~Gd~~~~~~ 468 (765)
+..++..+++|++.+-.-.||. + ..+++|||++ |++..- .. .|....+++||++.|..+ |.
T Consensus 8 ~~~~~~~~~~ir~~l~~~~~g~-~----S~S~YDTAWV--Amvp~~--~~-~p~Fp~~~~wil~nQ~~D---Gs------ 68 (727)
T 3pya_A 8 SNAFKEAVKSVKTILRNLTDGE-I----TISAYDTAWV--ALIDAG--DK-TPAFPSAVKWIAENQLSD---GS------ 68 (727)
T ss_dssp CCHHHHHHHHHHHHHHTCCSCC-C----CCCHHHHHHH--HTCBCS--SS-SBSCHHHHHHHHHTCCTT---SC------
T ss_pred HHHHHHHHHHHHHHHHhccCCc-c----cCcHHHhHHH--hhccCC--CC-CCCCHHHHHHHHhcCCCC---CC------
Confidence 3356666777776543223442 1 4568999995 555321 22 466778999999999875 44
Q ss_pred CCCCCCCCCCCCCCCCCChhh---hHHHHHHHHHhccccccccCCCCChHHHHHHHHHHHhccccCCCccccccCCCcch
Q 043885 469 HEFQEGWPFSSLDNGWIATDT---TAEGLNVSVLLSEMSYDLVGEAIPLNRLFEAVNVVLSLQNSSGGVASYERTRSYAW 545 (765)
Q Consensus 469 ~~~~GgW~fs~~~~~~pd~D~---TA~aL~aL~~l~~~~~~~~g~~~~~~~l~~av~~Lls~Qn~dGGw~~~e~~~~~~~ 545 (765)
|+-. ++.+..|+ |..|+.||.... +.++++.+|+.+|.+.-.. |..=.....+-.
T Consensus 69 ------WG~~---~~~~~~D~ll~TLAcvlAL~~w~----------~~~~~i~rGl~fl~~nl~~---~~~~~~~~~pvG 126 (727)
T 3pya_A 69 ------WGDA---YLFSYHDRLINTLACVVALRSWN----------LFPHQCNKGITFFRENIGK---LEDENDEHMPIG 126 (727)
T ss_dssp ------CSCS---SSCCHHHHHHHHHHHHHHHHHTT----------CCHHHHHHHHHHHHHHGGG---TTCCSSCCCCTT
T ss_pred ------CCCC---CCcchhhHHHHHHHHHHHHHHcc----------CCHHHHHHHHHHHHHHHHH---hhccCCCCCCce
Confidence 5421 12233454 666666665431 2357999999999864221 110001223333
Q ss_pred hhccccc--cccccccccCCccCcHH-HHHHH-----HHhcc----CcCCccchhHHHHHHHHHHHH--HHHhcCCCCCC
Q 043885 546 MEMLNPV--ENFGESIIDYQYVECTS-STIQC-----LKSFT----KHYPKHRRREIEEFIAKGANF--IESIQRPDGWW 611 (765)
Q Consensus 546 le~l~p~--e~f~~~~~d~~~~d~Ta-~~l~a-----L~~~~----~~~p~~r~~~i~~~I~rAv~~--L~~~Q~~DGsW 611 (765)
.|.+=|+ +...+..++.|+. -+. ..|.+ |..+. ...|..-- -.-+.+.. ++| +.+.|..|||.
T Consensus 127 feiifP~Ll~~a~~~gl~~p~~-~~~l~~i~~~r~~kL~r~~~~~~~~~p~~ll-hslEgl~~-~dw~~~~~~q~~~GS~ 203 (727)
T 3pya_A 127 FEVAFPSLLEIARGINIDVPYD-SPVLKDIYAKKELKLTRIPKEIMHKIPTTLL-HSLEGMRD-LDWEKLLKLQSQDGSF 203 (727)
T ss_dssp HHHHHHHHHHHHHHTTCCSCTT-CHHHHHHHHHHHHHHHHSCHHHHTTSCCGGG-GGGGGCCC-CCHHHHGGGCCTTSSB
T ss_pred eeeeHHHHHHHHHHcCcCCCCC-chHHHHHHHhHHHHHhCCChhhccCCCchHH-HHHhcccc-cCHHHHhcccCCCCCc
Confidence 4443221 1111122232221 111 11111 11110 00111000 00011111 233 44578889997
Q ss_pred CCCCCCCchhHHHHHHHHHHHcCCCCCChHHHHHHHHHHHhcccCCCccccccccccccccccCCCCCCcHHHHHHHHHH
Q 043885 612 YGSWGVCFTYGTWFGIKGLVDSGRKYENSRSIRKACDFLLSKQLDSGGWGESYVSCVDRVYTNLEGNKAHNVNTAWAMLA 691 (765)
Q Consensus 612 ~g~wg~~~~YgT~~al~aL~aaG~~~~~~~~i~rav~~Lls~Q~~DGGWGes~~s~~~~~Y~~l~g~~S~~~~TAwALlA 691 (765)
.. ..-.|+.+++. .+ + .++.+||.+..+.-||---+ .| +.++....|.+-+
T Consensus 204 ~~-----SPsaTAa~l~~---~~----d----~~~l~YL~~~v~k~~g~VP~-------~y------P~d~~e~L~lID~ 254 (727)
T 3pya_A 204 LF-----SPSSTAFAFMQ---TR----D----SNCLEYLRNAVKRFNGGVPN-------VF------PVDLFEHIWIVDR 254 (727)
T ss_dssp TT-----BHHHHHHHHHH---HC----C----HHHHHHHHHHHHHTTTCCCS-------SC------CCHHHHHHHHHHH
T ss_pred cc-----CHHHHHHHHhc---CC----C----HHHHHHHHHHHHHcCCCCCC-------CC------CCcHHHHHHHHHH
Confidence 53 34578776643 22 1 47899999887765442111 11 3678899999999
Q ss_pred HHHhCCCCCCcHHHHHHHHHHHhcCcC
Q 043885 692 LIEAGQAHRDPTPLHRAARVLINSQME 718 (765)
Q Consensus 692 L~~aG~~~~d~~~i~rav~~L~~~Q~~ 718 (765)
|...|....=...|+..++.+-+....
T Consensus 255 LqRLGIs~hFe~EI~~~L~~i~~~~~~ 281 (727)
T 3pya_A 255 LQRLGISRYFEEEIKECLDYVHRYWTD 281 (727)
T ss_dssp HHHTTCGGGGHHHHHHHHHHHHHTCCT
T ss_pred HHHcCCccccHHHHHHHHHHHHHHhhh
Confidence 999997632234689999998765333
No 52
>3p5p_A Taxadiene synthase; class I and II terpene cyclase fold, diterpene cyclase, DDXX NSE/DTE motif, 3-azacopalyl diphosphate; HET: A3C; 1.82A {Taxus brevifolia} PDB: 3p5r_A*
Probab=96.49 E-value=0.0028 Score=75.34 Aligned_cols=85 Identities=15% Similarity=0.205 Sum_probs=58.5
Q ss_pred CCchhHHHHHHHHHHHcC-CCCCChHHHHHHHHHHHhcccCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHHh
Q 043885 617 VCFTYGTWFGIKGLVDSG-RKYENSRSIRKACDFLLSKQLDSGGWGESYVSCVDRVYTNLEGNKAHNVNTAWAMLALIEA 695 (765)
Q Consensus 617 ~~~~YgT~~al~aL~aaG-~~~~~~~~i~rav~~Lls~Q~~DGGWGes~~s~~~~~Y~~l~g~~S~~~~TAwALlAL~~a 695 (765)
.+..|-|+++ |++-.- ......+.-.+.++||+..|.+|||||..... ..| -.+.+|..||+||..-
T Consensus 30 S~S~YDTAWV--amvp~~~~~~~~~p~Fp~~~~wil~nQ~~DGsWg~~~~~---~~~-------d~ll~TlAcvlAL~~w 97 (764)
T 3p5p_A 30 SPSAYDTAWV--ARLATISSDGSEKPRFPQALNWVFNNQLQDGSWGIESHF---SLC-------DRLLNTTNSVIALSVW 97 (764)
T ss_dssp CCCHHHHHHH--HHCEEECTTSCEEESCHHHHHHHHHCCCTTSCCSCTTSC---CHH-------HHHHHHHHHHHHHHHT
T ss_pred cCcHHHHHHH--HhCccccCCCCCCCCChHHHHHHHHccCCCCCCCCCCCc---chH-------HHHHHHHHHHHHHHHc
Confidence 3679999995 554221 01012334568899999999999999864110 001 2378999999999996
Q ss_pred CCCCCCcHHHHHHHHHHHhcC
Q 043885 696 GQAHRDPTPLHRAARVLINSQ 716 (765)
Q Consensus 696 G~~~~d~~~i~rav~~L~~~Q 716 (765)
+. .+..++||+.||.+.-
T Consensus 98 ~~---~~~~i~~Gl~fl~~nl 115 (764)
T 3p5p_A 98 KT---GHSQVQQGAEFIAENL 115 (764)
T ss_dssp TC---CHHHHHHHHHHHHHHH
T ss_pred cC---CHHHHHHHHHHHHHHH
Confidence 53 3568999999998753
No 53
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=96.38 E-value=0.074 Score=58.01 Aligned_cols=132 Identities=16% Similarity=0.070 Sum_probs=78.4
Q ss_pred hhHHHHHHHHHHHcCCC-CC-------ChHHHHHHHHHHHhcccC-CCccccccccccccccccCCCCCCcHHHHHHHHH
Q 043885 620 TYGTWFGIKGLVDSGRK-YE-------NSRSIRKACDFLLSKQLD-SGGWGESYVSCVDRVYTNLEGNKAHNVNTAWAML 690 (765)
Q Consensus 620 ~YgT~~al~aL~aaG~~-~~-------~~~~i~rav~~Lls~Q~~-DGGWGes~~s~~~~~Y~~l~g~~S~~~~TAwALl 690 (765)
..|.++++.||...-.. +. --...++.+++|++.|.+ ||-|.. ....+ .+ +++.-..+.||...-
T Consensus 212 aRg~gW~~~gl~~~l~~lp~~~~~~~~~~~~~~~~a~~l~~~q~~~dG~W~~-~ld~~--~~---~~~~~EsSatA~~ay 285 (373)
T 1nc5_A 212 ARSIGWYVMSLADMIEELPKKHPNRHVWKNTLQDMIKSICRYQDKETGLWYQ-IVDKG--DR---SDNWLESSGSCLYMY 285 (373)
T ss_dssp HHHHHHHHHHHHHHGGGSCTTCHHHHHHHHHHHHHHHHHHTTSCTTTSCCBS-BTTCT--TS---TTCCBCHHHHHHHHH
T ss_pred cchHhHHHHHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHhcCCCCCceee-ecCCC--CC---CCCCccccHHHHHHH
Confidence 45888899998754221 11 124567779999999997 999963 22111 11 122345677777666
Q ss_pred HHHHh---CCCC-CCcHHHHHHHHHHHhc---CcCCCCC--CCCccccccCCcc--cccc-----CCccchHHHHHHHHH
Q 043885 691 ALIEA---GQAH-RDPTPLHRAARVLINS---QMENGDF--PQQEIMGSFTRNC--MISY-----SAWRNIFPIWALGAF 754 (765)
Q Consensus 691 AL~~a---G~~~-~d~~~i~rav~~L~~~---Q~~dG~w--~~~~~~g~f~~~~--~~~Y-----~~Yr~~fpl~ALg~y 754 (765)
+|+.+ |..+ .-.+.++|+.+.|++. ..+||.. ..-+..| .+..+ |++. ..|-.-.-|+|+.++
T Consensus 286 ~l~~g~~~g~l~~~Y~~~a~k~~~~l~~~~~~~~~dG~l~~~~~~~~~-~~~~~~yY~~~~~~~~d~~G~g~~lla~~e~ 364 (373)
T 1nc5_A 286 AIAKGINKGYLDRAYETTLLKAYQGLIQHKTETSEDGAFLVKDICVGT-SAGFYDYYVSRERSTNDLHGAGAFILAMTEL 364 (373)
T ss_dssp HHHHHHHHTSSCGGGHHHHHHHHHHHHHHHEEECTTSCEEECCEECSC-CSCCHHHHHTSCEESSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCcHHHHHHHHHHHHHHHHhceeECCCCCEEecceEEeC-cCCCchhhhcccCCCCCcchHHHHHHHHHHH
Confidence 66653 5432 1124789999999884 4678853 3323333 22222 3322 244556779999998
Q ss_pred HHhc
Q 043885 755 YNRV 758 (765)
Q Consensus 755 ~~~~ 758 (765)
.+..
T Consensus 365 ~~~~ 368 (373)
T 1nc5_A 365 EPLF 368 (373)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8754
No 54
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=96.18 E-value=0.095 Score=57.44 Aligned_cols=100 Identities=16% Similarity=0.161 Sum_probs=60.6
Q ss_pred hHHHHHHHHHHHhccccCCCccccccCCCcchhhccccccccccccccCCccCcHHHHHHHHHhccCcCCccchhHHHHH
Q 043885 514 LNRLFEAVNVVLSLQNSSGGVASYERTRSYAWMEMLNPVENFGESIIDYQYVECTSSTIQCLKSFTKHYPKHRRREIEEF 593 (765)
Q Consensus 514 ~~~l~~av~~Lls~Qn~dGGw~~~e~~~~~~~le~l~p~e~f~~~~~d~~~~d~Ta~~l~aL~~~~~~~p~~r~~~i~~~ 593 (765)
.+.+++.++.++..|.+||.|-..- +. | .++.|.++.++-+-+++....-++-.+++.++
T Consensus 262 ~~~~~~~a~~~~~~q~~~G~W~~~~-d~---------~----------~~y~EsSatA~~ay~ll~~~~~g~l~~~Y~~~ 321 (382)
T 3pmm_A 262 ITVLDAQIAALAECQDDSGLWHTLL-DD---------P----------HSYLEASATAGFAYGILKAVRKRYVGQHYAGV 321 (382)
T ss_dssp HHHHHHHHHHHHHHCCTTSCEESBT-TC---------T----------TSCEEHHHHHHHHHHHHHHHHTTSSCGGGHHH
T ss_pred HHHHHHHHHHHHHcCCCCCChhhcc-CC---------C----------CCCccccHHHHHHHHHHHHHHcCCCcHHHHHH
Confidence 3567788899999999999986321 11 0 02345566665444332210001112457789
Q ss_pred HHHHHHHHHHhcCCCCCCCCC-----CC-----------CCchhHHHHHHHHHHHc
Q 043885 594 IAKGANFIESIQRPDGWWYGS-----WG-----------VCFTYGTWFGIKGLVDS 633 (765)
Q Consensus 594 I~rAv~~L~~~Q~~DGsW~g~-----wg-----------~~~~YgT~~al~aL~aa 633 (765)
+.||.+-|.+...+||.-.+- -| +...||.+.+|.++...
T Consensus 322 a~ka~~~l~~~i~~dG~l~~v~~gt~~g~~~~~Y~~~p~~~~~~G~~~~lla~~e~ 377 (382)
T 3pmm_A 322 AEKAIRGIVQNISPQGELLQTSFGTGMGSDLDFYRQIPLTSMPYGQAMAILCLTEY 377 (382)
T ss_dssp HHHHHHHHHHTBCTTSCBCSCBCCCCCCSSHHHHHTCCBCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCCCCEeCeecCCCCCCChhhhhcccCCCCCccHHHHHHHHHHH
Confidence 999999999999999965321 11 11256777777777643
No 55
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=95.82 E-value=0.39 Score=52.18 Aligned_cols=128 Identities=16% Similarity=0.181 Sum_probs=75.8
Q ss_pred HHHHHHHHHhccCcCCcc--chhHHHHHHHHHHHHHHHhcCC-CCCCCCCC-----CCCc--hhHHHHHHHHHHH---cC
Q 043885 568 TSSTIQCLKSFTKHYPKH--RRREIEEFIAKGANFIESIQRP-DGWWYGSW-----GVCF--TYGTWFGIKGLVD---SG 634 (765)
Q Consensus 568 Ta~~l~aL~~~~~~~p~~--r~~~i~~~I~rAv~~L~~~Q~~-DGsW~g~w-----g~~~--~YgT~~al~aL~a---aG 634 (765)
.+-++.+|..+-+..|.. .++++.+..++.+++|.+.|.+ ||.|...- ..+| +.+|+....||.. .|
T Consensus 215 ~gW~~~gl~~~l~~lp~~~~~~~~~~~~~~~~a~~l~~~q~~~dG~W~~~ld~~~~~~~~~EsSatA~~ay~l~~g~~~g 294 (373)
T 1nc5_A 215 IGWYVMSLADMIEELPKKHPNRHVWKNTLQDMIKSICRYQDKETGLWYQIVDKGDRSDNWLESSGSCLYMYAIAKGINKG 294 (373)
T ss_dssp HHHHHHHHHHHGGGSCTTCHHHHHHHHHHHHHHHHHHTTSCTTTSCCBSBTTCTTSTTCCBCHHHHHHHHHHHHHHHHHT
T ss_pred HhHHHHHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHhcCCCCCceeeecCCCCCCCCCccccHHHHHHHHHHHHHHCC
Confidence 455677776654433432 2455777889999999999997 99997321 1222 4567766667654 24
Q ss_pred CC-CCChHHHHHHHHHHHhc---ccCCC--cccccccccccc--c-cccCCCCCCcHHHHHHHHHHHHHh
Q 043885 635 RK-YENSRSIRKACDFLLSK---QLDSG--GWGESYVSCVDR--V-YTNLEGNKAHNVNTAWAMLALIEA 695 (765)
Q Consensus 635 ~~-~~~~~~i~rav~~Lls~---Q~~DG--GWGes~~s~~~~--~-Y~~l~g~~S~~~~TAwALlAL~~a 695 (765)
.. ..-.+.+.|+.+.|.++ .++|| +++..|....+. . |...+-...++...+..|+|+.+.
T Consensus 295 ~l~~~Y~~~a~k~~~~l~~~~~~~~~dG~l~~~~~~~~~~~~~~~yY~~~~~~~~d~~G~g~~lla~~e~ 364 (373)
T 1nc5_A 295 YLDRAYETTLLKAYQGLIQHKTETSEDGAFLVKDICVGTSAGFYDYYVSRERSTNDLHGAGAFILAMTEL 364 (373)
T ss_dssp SSCGGGHHHHHHHHHHHHHHHEEECTTSCEEECCEECSCCSCCHHHHHTSCEESSCHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHhceeECCCCCEEecceEEeCcCCCchhhhcccCCCCCcchHHHHHHHHHHH
Confidence 21 12368899999999884 57888 444432211111 1 221000122466788888887764
No 56
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=95.03 E-value=0.47 Score=52.92 Aligned_cols=211 Identities=12% Similarity=0.095 Sum_probs=115.6
Q ss_pred chhHHHHHHHHHHHc---CCCCcchHHHHHHHHHHHhhccccCCCCCCccccCCCCCCCCCCCCCCCCCCC-hhhhHHHH
Q 043885 419 QLWDTAFAVHAILST---NLVDEYGSMLKKANNYIKTTQVRTKSFEDPSCWYRHEFQEGWPFSSLDNGWIA-TDTTAEGL 494 (765)
Q Consensus 419 ~~WDTalai~AL~~a---g~~~~~~~~l~kA~~~L~~~Q~~~~~~Gd~~~~~~~~~~GgW~fs~~~~~~pd-~D~TA~aL 494 (765)
.+.|.++.+.+|.+. .-.+++.+.+....+||.+.|.+.. .|.+. +...... .. +|+--.++
T Consensus 143 ~LDD~g~~~~~Li~lY~~T~d~~yl~~a~~~ad~L~~~~pRt~-~Ggf~------------h~~~~~~-q~WiD~lyM~~ 208 (445)
T 3k11_A 143 ALDDAGAVCTAMIKLRLKDESLPVDGLIQNYFDFIINKEYRLA-DGTFA------------RNRPQRN-TLWLDDMFMGI 208 (445)
T ss_dssp SGGGTHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHTSCBCT-TCCBC------------BCSSSTT-EEETHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHcCCCCC-CCcee------------ecCCCCC-ceEecchhhHH
Confidence 567888777777753 3345678999999999999987652 24432 2111111 23 34433555
Q ss_pred HHHHHhccccccccCCCCChHHHHHHHH----HHHhcccc-CCCcc-ccccCCCcchhhccccccccccccccCCccCcH
Q 043885 495 NVSVLLSEMSYDLVGEAIPLNRLFEAVN----VVLSLQNS-SGGVA-SYERTRSYAWMEMLNPVENFGESIIDYQYVECT 568 (765)
Q Consensus 495 ~aL~~l~~~~~~~~g~~~~~~~l~~av~----~Lls~Qn~-dGGw~-~~e~~~~~~~le~l~p~e~f~~~~~d~~~~d~T 568 (765)
..|..++.. .|++. ..-+++|++ +...++++ +|-|- .|...+.. ...... .-..
T Consensus 209 pfla~~~~~----tgd~~-~~y~d~A~~q~~~~~~~l~D~~tGL~~Hg~~~~~~~-----------~~~~~W----aRGn 268 (445)
T 3k11_A 209 PAVAQMSRY----DKEAK-NKYLAEAVKQFLQFADRMFIPEKGLYRHGWVESSTD-----------HPAFCW----ARAN 268 (445)
T ss_dssp HHHHHHHHH----CGGGH-HHHHHHHHHHHHHHHHHHEETTTTEECSEEETTCSS-----------CCCCCB----HHHH
T ss_pred HHHHHHHHH----HCCcc-hHHHHHHHHHHHHHHHhcccCCCCCEeeeecCCCCC-----------CCccee----cccc
Confidence 555555432 23221 003444443 33334554 45442 11111100 000000 1124
Q ss_pred HHHHHHHHhccCcCCc-c-chhHHHHHHHHHHHHHHHhcCCCCCCCCCCCC--Cc--hhHHHHHHHHHH---HcCCCC--
Q 043885 569 SSTIQCLKSFTKHYPK-H-RRREIEEFIAKGANFIESIQRPDGWWYGSWGV--CF--TYGTWFGIKGLV---DSGRKY-- 637 (765)
Q Consensus 569 a~~l~aL~~~~~~~p~-~-r~~~i~~~I~rAv~~L~~~Q~~DGsW~g~wg~--~~--~YgT~~al~aL~---aaG~~~-- 637 (765)
+-++.+|...-+..|. + .++++.+..++.++.|.+.|.+||.|.-.-.. +| +.||+....||. ..|...
T Consensus 269 GW~~~gl~~~l~~lp~~~~~r~~l~~~~~~~a~~l~~~Q~~~G~W~~vld~~~~y~EsSaTAmfaygllkgvr~G~Ld~~ 348 (445)
T 3k11_A 269 GWALLTACELLDVLPEDYPQRPKVMDYFRAHVRGVTALQSGEGFWHQLLDCNDSYLETSATAIYVYCLAHAINKGWIDAI 348 (445)
T ss_dssp HHHHHHHHHHHHHSCTTCTTHHHHHHHHHHHHHHHHTTCCTTSCEESBTTCTTSCEEHHHHHHHHHHHHHHHHHTSSCHH
T ss_pred hHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHhCCCCCchhhccCCCCCCCCccHHHHHHHHHHHHHHcCCCCHH
Confidence 4445555543322222 1 24567788999999999999999999743221 22 457777666664 334431
Q ss_pred CChHHHHHHHHHHHhcccCCCccccc
Q 043885 638 ENSRSIRKACDFLLSKQLDSGGWGES 663 (765)
Q Consensus 638 ~~~~~i~rav~~Lls~Q~~DGGWGes 663 (765)
.-.+.++||.+.|.++-++||--+..
T Consensus 349 ~Y~~~A~ka~~~L~~~i~~dG~l~~v 374 (445)
T 3k11_A 349 AYGPVAQLGWHAVAGKINEEGQVEGT 374 (445)
T ss_dssp HHHHHHHHHHHHHHTTBCTTSCBCSC
T ss_pred HHHHHHHHHHHHHHHhCCCCCCEece
Confidence 02467899999999998999865433
No 57
>1lf6_A Glucoamylase; (alpha/alpha) barrel, 6 alpha-helical hairpin torroid, super beta sandwich, carbohydrase family GH15; 2.10A {Thermoanaerobacteriumthermosaccharolyticum} SCOP: a.102.1.5 b.30.5.5 PDB: 1lf9_A*
Probab=94.60 E-value=0.59 Score=55.04 Aligned_cols=86 Identities=12% Similarity=0.107 Sum_probs=59.7
Q ss_pred hHHHHHHHHHHHcCCCCcchHHHHHHHHHHHhhccccCCCCCCccccCCCCCCCCCCCCCCCCCCChhhhHHHHHHHHHh
Q 043885 421 WDTAFAVHAILSTNLVDEYGSMLKKANNYIKTTQVRTKSFEDPSCWYRHEFQEGWPFSSLDNGWIATDTTAEGLNVSVLL 500 (765)
Q Consensus 421 WDTalai~AL~~ag~~~~~~~~l~kA~~~L~~~Q~~~~~~Gd~~~~~~~~~~GgW~fs~~~~~~pd~D~TA~aL~aL~~l 500 (765)
=|.+++++||..+|.+ +..++.++||.+.|..+ |++...+. ..|. ++ .+-+-.|.|+..|.++..+
T Consensus 343 RD~~~~~~al~~~G~~----~~a~~~l~~l~~~q~~~---G~~~~~~~--~~G~-p~----w~~~Q~D~~g~~l~~~~~~ 408 (684)
T 1lf6_A 343 RDLYHVANAFIAAGDV----DSANRSLDYLAKVVKDN---GMIPQNTW--ISGK-PY----WTGIQLDEQADPIILSYRL 408 (684)
T ss_dssp HHHHHHHHHHHHHTCH----HHHHHHHHHHHHHHHHH---SSCCSCBC--TTSC-BC----CCCCCHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHcCCH----HHHHHHHHHHHhhcCCC---CCccccee--CCCC-cc----cCCccccchHHHHHHHHHH
Confidence 3899999999999853 45788999999999765 66532221 1221 21 1125689999999888765
Q ss_pred ccccccccCCCCChHH-HHHHHHHHHhcc
Q 043885 501 SEMSYDLVGEAIPLNR-LFEAVNVVLSLQ 528 (765)
Q Consensus 501 ~~~~~~~~g~~~~~~~-l~~av~~Lls~Q 528 (765)
.+ .| .-+. ++++++|+.+.-
T Consensus 409 ~~-----~g---~~~~~v~~al~~i~~~~ 429 (684)
T 1lf6_A 409 KR-----YD---LYDSLVKPLADFIIKIG 429 (684)
T ss_dssp TC-----GG---GTTTTHHHHHHHHHHHC
T ss_pred HH-----cC---chHHHHHHHHHHHHHhC
Confidence 43 23 3455 999999999863
No 58
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=94.37 E-value=1.5 Score=47.37 Aligned_cols=154 Identities=9% Similarity=-0.011 Sum_probs=77.9
Q ss_pred CCchhHHHHHHHHHHHcCC----CCcchHHHHHHHHHHHhhccccCCCCCCccccCCCCCCCCCCCCCCCCCCChhhhHH
Q 043885 417 GSQLWDTAFAVHAILSTNL----VDEYGSMLKKANNYIKTTQVRTKSFEDPSCWYRHEFQEGWPFSSLDNGWIATDTTAE 492 (765)
Q Consensus 417 gs~~WDTalai~AL~~ag~----~~~~~~~l~kA~~~L~~~Q~~~~~~Gd~~~~~~~~~~GgW~fs~~~~~~pd~D~TA~ 492 (765)
.-.+||.|.++.+++.+.. .+++....+++++||++.-... .|+|-... ...|.. .+ .--...+-|.
T Consensus 49 eK~l~~nar~i~~~a~a~~~~~~~~~~~~~A~~~~~~l~~~~~~~--~Gg~~~~~--d~dg~~----~~-~~~~~~~~af 119 (388)
T 2gz6_A 49 DKFIWLQNRQVWTFSMLCNQLEKRENWLKIARNGAKFLAQHGRDD--EGNWYFAL--TRGGEP----LV-QPYNIFSDCF 119 (388)
T ss_dssp CEEHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHSBCT--TSCBCSEE--CTTSCB----CC-CCCCHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCCC--CCCEEEEE--cCCCCc----cc-CCcchHHHHH
Confidence 3457999999999987532 2346778899999999874432 14432111 011110 00 0134567888
Q ss_pred HHHHHHHhccccccccCCCCChHHHHHHHHHHHhccc-cCCCccccccCCCcchhhccccccccccccccCCccCcHHHH
Q 043885 493 GLNVSVLLSEMSYDLVGEAIPLNRLFEAVNVVLSLQN-SSGGVASYERTRSYAWMEMLNPVENFGESIIDYQYVECTSST 571 (765)
Q Consensus 493 aL~aL~~l~~~~~~~~g~~~~~~~l~~av~~Lls~Qn-~dGGw~~~e~~~~~~~le~l~p~e~f~~~~~d~~~~d~Ta~~ 571 (765)
++.|+..+.+. .|++...+...+..+++++... ++|.|.....+. .+ +...+..+.+
T Consensus 120 ~i~al~~~y~~----tg~~~~l~~A~~~~~~i~~~~~d~~g~~~~~~~~~--------~~----------~~~~~~~~~~ 177 (388)
T 2gz6_A 120 AAMAFSQYALA----SGEEWAKDVAMQAYNNVLRRKDNPKGKYTKTYPGT--------RP----------MKALAVPMIL 177 (388)
T ss_dssp HHHHHHHHHHH----HCCHHHHHHHHHHHHHHHTC--------------C--------CC----------CEETHHHHHH
T ss_pred HHHHHHHHHHH----hCCHHHHHHHHHHHHHHHHHhcCCCcccCcccCCC--------CC----------CCCCCHHHHH
Confidence 88888776532 2444344556666777877653 334432111100 00 0112334455
Q ss_pred HHHHHhccCcCCccchhHHHHHHHHHHHHHHHh
Q 043885 572 IQCLKSFTKHYPKHRRREIEEFIAKGANFIESI 604 (765)
Q Consensus 572 l~aL~~~~~~~p~~r~~~i~~~I~rAv~~L~~~ 604 (765)
+.+|..+.+..+ .++..+...+.++.+.+.
T Consensus 178 ~~all~l~~~t~---d~~~~~~A~~~~~~~~~~ 207 (388)
T 2gz6_A 178 ANLTLEMEWLLP---QETLENVLAATVQEVMGD 207 (388)
T ss_dssp HHHHHHTGGGSC---HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcC---CHHHHHHHHHHHHHHHHH
Confidence 666655443222 234556667777777664
No 59
>2fba_A Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hydrolase; 1.10A {Saccharomycopsis fibuligera} SCOP: a.102.1.1 PDB: 1ayx_A* 2f6d_A
Probab=92.22 E-value=2.9 Score=47.20 Aligned_cols=73 Identities=15% Similarity=0.131 Sum_probs=42.9
Q ss_pred hHHHHHHHHHHHcCCCCcc-hHHHHHHHHHHH---hhccccCCCCCCc----------cccCCCC--CCCCCCCCCCCCC
Q 043885 421 WDTAFAVHAILSTNLVDEY-GSMLKKANNYIK---TTQVRTKSFEDPS----------CWYRHEF--QEGWPFSSLDNGW 484 (765)
Q Consensus 421 WDTalai~AL~~ag~~~~~-~~~l~kA~~~L~---~~Q~~~~~~Gd~~----------~~~~~~~--~GgW~fs~~~~~~ 484 (765)
=|.++++.||.++|...+. ....+.+.+|+. ..|...+++|.|. .+..+-+ .++|. -
T Consensus 69 RDaa~t~~aL~~~g~~~~~~~~l~~~a~~y~~~~~~lq~~~~~~G~~~~~~~~glgep~y~vdG~~~~~~w~-------~ 141 (492)
T 2fba_A 69 RDSAITFLTVLSELEDNNFNTTLAKAVEYYINTSYNLQRTSNPSGSFDDENHKGLGEPKFNTDGSAYTGAWG-------R 141 (492)
T ss_dssp HHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTSCBTTBCTTSGGGGGGGCCEECTTSCBCCSCCS-------C
T ss_pred chHHHHHHHHHHhCcccccccchHHHHHHHHHHHHHHhcccCCCCCcCcccccccCceeeccCCCcCCcccC-------C
Confidence 3899999999999863221 122344444554 4554445567776 2222211 12332 2
Q ss_pred CChhhhHHHHHHHHHh
Q 043885 485 IATDTTAEGLNVSVLL 500 (765)
Q Consensus 485 pd~D~TA~aL~aL~~l 500 (765)
|-.|.+|..+.++...
T Consensus 142 ~Q~D~~g~~~~al~~~ 157 (492)
T 2fba_A 142 PQNDGPALRAYAISRY 157 (492)
T ss_dssp CBTTHHHHHHHHHHHH
T ss_pred ccccchhHHHHHHHHH
Confidence 6779999988887654
No 60
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=91.45 E-value=7.1 Score=42.51 Aligned_cols=98 Identities=12% Similarity=0.059 Sum_probs=63.5
Q ss_pred CchhHHHHHHHHHHHcCC---CCcchHHHHHHHHHHHhhccccCCCCCCccccCCCCCCCCCCCCCCCCCC-----Chhh
Q 043885 418 SQLWDTAFAVHAILSTNL---VDEYGSMLKKANNYIKTTQVRTKSFEDPSCWYRHEFQEGWPFSSLDNGWI-----ATDT 489 (765)
Q Consensus 418 s~~WDTalai~AL~~ag~---~~~~~~~l~kA~~~L~~~Q~~~~~~Gd~~~~~~~~~~GgW~fs~~~~~~p-----d~D~ 489 (765)
-.+|+++.+|.+++.+.. .+++....+++++||.+.-... . .|||.++.. .|-| ..++
T Consensus 49 k~l~~n~r~i~~~a~a~~~~g~~~~l~~A~~~~~fl~~~~~d~--~-----------~Gg~~~~~~-dG~~~~~~~~lyd 114 (402)
T 3gt5_A 49 RHLVSSTRFVFNYAMAYLQFGTAEYLDAVHHGLSYVRDVHRNP--A-----------TGGYAWTLC-DDRVEDDTNHCYG 114 (402)
T ss_dssp EEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTBCT--T-----------TSCBCSEEE-TTEEEECCEEHHH
T ss_pred hhHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHhCccC--C-----------CCcEEEEee-CCCCCcCCcchHH
Confidence 458999999999987632 2345677889999998742211 1 156666653 3323 3567
Q ss_pred hHHHHHHHHHhccccccccCCCCChHHHHHHHHHHHhc-cccC-CCc
Q 043885 490 TAEGLNVSVLLSEMSYDLVGEAIPLNRLFEAVNVVLSL-QNSS-GGV 534 (765)
Q Consensus 490 TA~aL~aL~~l~~~~~~~~g~~~~~~~l~~av~~Lls~-Qn~d-GGw 534 (765)
-|.++.|++.... .|++...+...+..++|.+. .+++ ||+
T Consensus 115 ~Af~i~al~~~~~-----tgd~~~l~~A~~l~~~i~~~f~d~~~G~~ 156 (402)
T 3gt5_A 115 LAFVMLAYSCGLK-----VGIKQAREWMDETWCLLERHFWDAEYGLY 156 (402)
T ss_dssp HHHHHHHHHHHHH-----TTCTTHHHHHHHHHHHHHHHTEETTTTEE
T ss_pred HHHHHHHHHHHHH-----hCChhHHHHHHHHHHHHHHHhcCCcCCCc
Confidence 8999999887432 35666666777777887765 4444 554
No 61
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=91.10 E-value=0.95 Score=48.87 Aligned_cols=126 Identities=13% Similarity=0.268 Sum_probs=74.5
Q ss_pred HHHHHHHH-HhccccCCCc-cccccCCCcchhhccccccccccccccCCccCcHHHHHHHHHhccCcCCccchhHHHHHH
Q 043885 517 LFEAVNVV-LSLQNSSGGV-ASYERTRSYAWMEMLNPVENFGESIIDYQYVECTSSTIQCLKSFTKHYPKHRRREIEEFI 594 (765)
Q Consensus 517 l~~av~~L-ls~Qn~dGGw-~~~e~~~~~~~le~l~p~e~f~~~~~d~~~~d~Ta~~l~aL~~~~~~~p~~r~~~i~~~I 594 (765)
+.+.+.+. ...++.+||| ..+..+.. +.|.| -...+.++.|.+++...... ...++..+.+
T Consensus 17 ~~~~l~fw~~~~~D~~GGf~~~~~~d~~------~~~~e---------K~l~~nar~i~~~a~a~~~~--~~~~~~~~~A 79 (388)
T 2gz6_A 17 LNDVLPFWENHSLDSEGGYFTCLDRQGK------VYDTD---------KFIWLQNRQVWTFSMLCNQL--EKRENWLKIA 79 (388)
T ss_dssp HHTHHHHHHHHCBCTTSSBCCEEBTTSC------EEECC---------EEHHHHHHHHHHHHHHHHHT--CCCHHHHHHH
T ss_pred HHhHHHHHHhcCCCCCCCEEeEECCCCC------cCCcc---------hhHHHHHHHHHHHHHHHHHh--cCCHHHHHHH
Confidence 34567776 5567778885 66655432 11211 12346888888887643220 1224567889
Q ss_pred HHHHHHHHHh-cCCCCCCCCCC--------CCCchhHHHHHHHHHHHc----CCCCCChHHHHHHHHHHHhcccC-CCcc
Q 043885 595 AKGANFIESI-QRPDGWWYGSW--------GVCFTYGTWFGIKGLVDS----GRKYENSRSIRKACDFLLSKQLD-SGGW 660 (765)
Q Consensus 595 ~rAv~~L~~~-Q~~DGsW~g~w--------g~~~~YgT~~al~aL~aa----G~~~~~~~~i~rav~~Lls~Q~~-DGGW 660 (765)
+++++||.+. +.++|+|+... .....|+-+|++.||+.+ |.. .--...++..++++++... +|.|
T Consensus 80 ~~~~~~l~~~~~~~~Gg~~~~~d~dg~~~~~~~~~~~~af~i~al~~~y~~tg~~-~~l~~A~~~~~~i~~~~~d~~g~~ 158 (388)
T 2gz6_A 80 RNGAKFLAQHGRDDEGNWYFALTRGGEPLVQPYNIFSDCFAAMAFSQYALASGEE-WAKDVAMQAYNNVLRRKDNPKGKY 158 (388)
T ss_dssp HHHHHHHHHHSBCTTSCBCSEECTTSCBCCCCCCHHHHHHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHTC--------
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCCCcccCCcchHHHHHHHHHHHHHHHHhCCH-HHHHHHHHHHHHHHHHhcCCCccc
Confidence 9999999887 67789987432 135678999999999753 322 1133455667788887643 3444
No 62
>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A*
Probab=90.93 E-value=2.6 Score=51.84 Aligned_cols=91 Identities=16% Similarity=0.032 Sum_probs=61.4
Q ss_pred chhHHHHHHHHHHHcCCCCcchHHHHHHHHHHHhhccccCCCCCCccccCCCCCCCCCCCCCCCCCCChhhhHHHHHHHH
Q 043885 419 QLWDTAFAVHAILSTNLVDEYGSMLKKANNYIKTTQVRTKSFEDPSCWYRHEFQEGWPFSSLDNGWIATDTTAEGLNVSV 498 (765)
Q Consensus 419 ~~WDTalai~AL~~ag~~~~~~~~l~kA~~~L~~~Q~~~~~~Gd~~~~~~~~~~GgW~fs~~~~~~pd~D~TA~aL~aL~ 498 (765)
-+.|++++++||..+|.+ +..++.++||.+.|... +|.+..+|+- +|=++ .+-+-.|.|+..|.++.
T Consensus 330 W~RDaa~t~~all~~G~~----e~A~~~l~~L~~~Q~~~--~G~~~~~y~i---~G~~~----w~~~Q~D~~g~~l~~~~ 396 (1020)
T 1ulv_A 330 WARDMYQSVTALLAAGDE----EAAARGVEWLFTYQQQP--DGHFPQTSRV---DGTIG----QNGIQLDETAFPILLAN 396 (1020)
T ss_dssp CHHHHHHHHHHHHHHTCH----HHHHHHHHHHHHHTCCT--TSCCCSCBCT---TSCBC----CCCCBTHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHcCCH----HHHHHHHHHHHHHhcCC--CCCeeeEEec---CCCcC----CCCccCccchHHHHHHH
Confidence 346999999999999854 45788999999999432 3777655532 22111 01135699999999988
Q ss_pred HhccccccccCCCCChHHHHHHHHHHHhc
Q 043885 499 LLSEMSYDLVGEAIPLNRLFEAVNVVLSL 527 (765)
Q Consensus 499 ~l~~~~~~~~g~~~~~~~l~~av~~Lls~ 527 (765)
.+.+. +..+..+.++++++|+.+.
T Consensus 397 ~~~~~-----d~~~w~~~v~~al~~i~~~ 420 (1020)
T 1ulv_A 397 QIGRT-----DAGFYRNELKPAADYLVAA 420 (1020)
T ss_dssp HHTCC-----CHHHHHHTHHHHHHHHHHH
T ss_pred HHHhc-----CHHHHHHHHHHHHHHHHHh
Confidence 76431 1111113788999999987
No 63
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*
Probab=90.00 E-value=15 Score=42.50 Aligned_cols=113 Identities=16% Similarity=0.066 Sum_probs=62.9
Q ss_pred hHHHHHHHHHH----HcCCCCcchHHHHHHHHHHHh---hccccCCCCCCccc----cCCCCCCCCCCCCCCCCCCChhh
Q 043885 421 WDTAFAVHAIL----STNLVDEYGSMLKKANNYIKT---TQVRTKSFEDPSCW----YRHEFQEGWPFSSLDNGWIATDT 489 (765)
Q Consensus 421 WDTalai~AL~----~ag~~~~~~~~l~kA~~~L~~---~Q~~~~~~Gd~~~~----~~~~~~GgW~fs~~~~~~pd~D~ 489 (765)
=|.+++++||. .+|. .+..++..+||.+ .|+..++.|.|... -+.....|-.| ...-+-|-.|.
T Consensus 53 RDaa~t~~aL~~~~~~~G~----~~~a~~~~~~l~~~~~lQ~~y~~~G~~~~~~~l~E~~~~ldG~~~-~~~w~~~Q~D~ 127 (599)
T 2vn4_A 53 RDSALVFKNLIDRFTETYD----AGLQRRIEQYITAQVTLQGLSNPSGSLADGSGLGEPKFELTLKPF-TGNWGRPQRDG 127 (599)
T ss_dssp HHHHHHHHHHHHHHHHSBC----HHHHHHHHHHHHHHHHHHHCCBTTBCSTTSGGGGCCEECTTSCBC-CSCCSCCCTHH
T ss_pred hhHHHHHHHHHHHHHhCCC----HHHHHHHHHHHhcccceeeeeCCCCCcccccCcCceEEecCCccc-cCcCCCeeccc
Confidence 38999999999 7785 4567889999975 67666667877311 00001112222 11112256677
Q ss_pred -----hHHHHHHHHHhccccccccCCCCChHHHHHHHHHHHhccccCCCccccccC
Q 043885 490 -----TAEGLNVSVLLSEMSYDLVGEAIPLNRLFEAVNVVLSLQNSSGGVASYERT 540 (765)
Q Consensus 490 -----TA~aL~aL~~l~~~~~~~~g~~~~~~~l~~av~~Lls~Qn~dGGw~~~e~~ 540 (765)
|++.+.++..+.....+.+ ....-+.|+++++|+...-+. -++.-||..
T Consensus 128 ~glr~~~~~~~~~~~~~~g~~~~~-~~~~w~~v~~~l~~v~~~w~~-~d~dlWEer 181 (599)
T 2vn4_A 128 PALRAIALIGYSKWLINNNYQSTV-SNVIWPIVRNDLNYVAQYWNQ-TGFDLWEEV 181 (599)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHH-HHHTHHHHHHHHHHHHHHTTS-CEECTTSCC
T ss_pred cchhHHHHHHHHHHHHHhCCcccc-cHHHHHHHHHHHHHHHHhCCC-CCCCeeeec
Confidence 6666665543221000000 001246899999999888764 344555543
No 64
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=89.64 E-value=4.1 Score=44.32 Aligned_cols=198 Identities=16% Similarity=0.163 Sum_probs=102.3
Q ss_pred cCCceeeccCC-------Cchh-HHHHHHHHHHHcCC---CCcchHHHHHHHHHHHhhccccCCCCC-CccccCCCCCCC
Q 043885 407 EDGMKMQAYNG-------SQLW-DTAFAVHAILSTNL---VDEYGSMLKKANNYIKTTQVRTKSFED-PSCWYRHEFQEG 474 (765)
Q Consensus 407 ~dG~~~q~~~g-------s~~W-DTalai~AL~~ag~---~~~~~~~l~kA~~~L~~~Q~~~~~~Gd-~~~~~~~~~~Gg 474 (765)
+.+..+|..+. .++| ||-+.|.+|..++. .+++...-+++.+++.+..++++ |. +...+-+...|.
T Consensus 126 ~~~g~i~sw~~~~~~~~~~~~iID~mmni~~L~~A~~~~gd~~y~~~A~~~a~~~l~~~~r~d--gs~~h~~~~D~~tG~ 203 (377)
T 2ahf_A 126 ADAGIIQAWGPKGDPENGGRIIIDCLLNLPLLLWAGEQTGDPEYRRVAEAHALKSRRFLVRGD--DSSYHTFYFDPENGN 203 (377)
T ss_dssp TTTTEECCBSSTTCTTTTTEEEGGGGGGHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHTBBTT--SCBCSEEEECTTTCC
T ss_pred CCCCeEEeccCCCCCCCCceEEechHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCcCCC--CCeEEEEEeeCCCCC
Confidence 56666776531 1444 67777778875422 24466777888899999988753 32 222221222343
Q ss_pred C----CCCCCCCCCCChhhh------HHHHHHHHHhccccccccCCCCChHHHHHHHHHHHhccccCCCccccccCCCcc
Q 043885 475 W----PFSSLDNGWIATDTT------AEGLNVSVLLSEMSYDLVGEAIPLNRLFEAVNVVLSLQNSSGGVASYERTRSYA 544 (765)
Q Consensus 475 W----~fs~~~~~~pd~D~T------A~aL~aL~~l~~~~~~~~g~~~~~~~l~~av~~Lls~Qn~dGGw~~~e~~~~~~ 544 (765)
+ ++ +|+. |+. |-++.+++.+-+. .+++..-+.-.+..++++.....||+ +.|......
T Consensus 204 ~~~~~t~----qG~~--dds~WaRGqAw~i~gl~~ly~~----T~d~~yL~~A~~la~~~l~~~~~d~~-pywd~~~~~- 271 (377)
T 2ahf_A 204 AIRGGTH----QGNT--DGSTWTRGQAWGIYGFALNSRY----LGNADLLETAKRMARHFLARVPEDGV-VYWDFEVPQ- 271 (377)
T ss_dssp EEEEECS----SSSS--TTSCBHHHHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHHTTCCTTSS-CBSBTTSCC-
T ss_pred eeeCCCc----CCcC--CcchhHHHHHHHHHHHHHHHHH----HCChHHHHHHHHHHHHHHHhhHHhCC-cccccCCCc-
Confidence 3 43 2333 455 7777777766432 22322333445557888888866666 233322100
Q ss_pred hhhccccccccccccccCCccCcHHHHH--HHHHhccCcCCc--cchhHHHHHHHHHHHHHHHhc------CCCCCC---
Q 043885 545 WMEMLNPVENFGESIIDYQYVECTSSTI--QCLKSFTKHYPK--HRRREIEEFIAKGANFIESIQ------RPDGWW--- 611 (765)
Q Consensus 545 ~le~l~p~e~f~~~~~d~~~~d~Ta~~l--~aL~~~~~~~p~--~r~~~i~~~I~rAv~~L~~~Q------~~DGsW--- 611 (765)
+ | . ...|.++.++ .+|..+.+..+. ...++..+...++++-+.+.- +.+|--
T Consensus 272 ----~-~--------~--~~~d~Sa~aiaA~~Ll~L~~~~~~~~~~~~~Y~~~A~~~l~~l~~~y~~~~~~~~~g~L~h~ 336 (377)
T 2ahf_A 272 ----E-P--------S--SYRDSSASAITACGLLEIASQLDESDPERQRFIDAAKTTVTALRDGYAERDDGEAEGFIRRG 336 (377)
T ss_dssp ----C-T--------T--SCBCHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHHHHTBCCCCSSCCCSBSCB
T ss_pred ----c-C--------C--CccCCCHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecc
Confidence 0 0 0 1112233333 333333222221 123346667777777776543 223311
Q ss_pred ----CC--CCCCCchhHHHHHHHHHHHc
Q 043885 612 ----YG--SWGVCFTYGTWFGIKGLVDS 633 (765)
Q Consensus 612 ----~g--~wg~~~~YgT~~al~aL~aa 633 (765)
.. ...++-+||-.+.+++|...
T Consensus 337 ~~~~~~~~~~d~~~~ygDy~~~Eal~r~ 364 (377)
T 2ahf_A 337 SYHVRGGISPDDYTIWGDYYYLEALLRL 364 (377)
T ss_dssp CSBTTTTBSSSBCBHHHHHHHHHHHHHH
T ss_pred cccCCCCCCCCcCccHHHHHHHHHHHHH
Confidence 11 12346789999999888754
No 65
>1gai_A Glucoamylase-471; hydrolase, glycosidase, polysaccharide degradation, glycoPro; HET: MAN NAG BMA GAC; 1.70A {Aspergillus awamori} SCOP: a.102.1.1 PDB: 1gah_A* 3gly_A* 1dog_A* 1glm_A* 1agm_A* 3eqa_A*
Probab=89.21 E-value=6.6 Score=44.04 Aligned_cols=104 Identities=19% Similarity=0.186 Sum_probs=59.6
Q ss_pred hHHHHHHHHHH---HcCCCCcchHHHHHHHHHHHh---hccccCCCCCCc------cccCCCCCCCCCCCCCCCCCCChh
Q 043885 421 WDTAFAVHAIL---STNLVDEYGSMLKKANNYIKT---TQVRTKSFEDPS------CWYRHEFQEGWPFSSLDNGWIATD 488 (765)
Q Consensus 421 WDTalai~AL~---~ag~~~~~~~~l~kA~~~L~~---~Q~~~~~~Gd~~------~~~~~~~~GgW~fs~~~~~~pd~D 488 (765)
=|.++++.||. .+|..+ ..++..+||.. .|...+++|.|. .+|. ..|=+|.. +.+-|-.|
T Consensus 54 RDaa~t~~aL~~~~~~G~~~----~a~~~~~~l~~~~~lQ~~~~~~G~l~~~glgE~~y~---vdG~~~~~-~w~~~Q~D 125 (472)
T 1gai_A 54 RDSGLVIKTLVDLFRNGDTD----LLSTIEHYISSQAIIQGVSNPSGDLSSGGLGEPKFN---VDETAYTG-SWGRPQRD 125 (472)
T ss_dssp HHHHHHHHHHHHHHHTTCGG----GHHHHHHHHHHHHHHHHCCBTTBCTTTTGGGCCEEC---TTSCBCCS-CCSCCCTH
T ss_pred hhHHHHHHHHHHHHhcCCHH----HHHHHHHHHHHHHHhhcccCCCCccccCCCCCceEc---cCCCccCC-cCCCcccc
Confidence 48999999999 788654 35777788877 443335567776 4441 12222211 12236678
Q ss_pred h-----hHHHHHHHHHhccccccccCCC-----CChHHHHHHHHHHHhccccCCCcccccc
Q 043885 489 T-----TAEGLNVSVLLSEMSYDLVGEA-----IPLNRLFEAVNVVLSLQNSSGGVASYER 539 (765)
Q Consensus 489 ~-----TA~aL~aL~~l~~~~~~~~g~~-----~~~~~l~~av~~Lls~Qn~dGGw~~~e~ 539 (765)
. |+..+.++..... |.. ..-+.+++.++|+...=+. -++.-||.
T Consensus 126 ~~g~ra~~~~~~~~~l~~~------g~~~~~~~~~w~~i~~~l~~v~~~w~~-pd~dlWEe 179 (472)
T 1gai_A 126 GPALRATAMIGFGQWLLDN------GYTSAATEIVWPLVRNDLSYVAQYWNQ-TGYDLWEE 179 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHT------TCHHHHHHTHHHHHHHHHHHHHHHTTS-CEECTTSC
T ss_pred ccchhHHHHHHHHHHHHHc------CCccccchhHHHHHHHHHHHHHHhcCC-CCCCCCcc
Confidence 8 6666666652221 221 1235688899999765432 24444554
No 66
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=86.71 E-value=22 Score=38.78 Aligned_cols=100 Identities=15% Similarity=0.089 Sum_probs=64.1
Q ss_pred CchhHHHHHHHHHHHcCCC--CcchHHHHHHHHHHHhhccccCCCCCCccccCCCCCCCCCCCCCCCCC----CChhhhH
Q 043885 418 SQLWDTAFAVHAILSTNLV--DEYGSMLKKANNYIKTTQVRTKSFEDPSCWYRHEFQEGWPFSSLDNGW----IATDTTA 491 (765)
Q Consensus 418 s~~WDTalai~AL~~ag~~--~~~~~~l~kA~~~L~~~Q~~~~~~Gd~~~~~~~~~~GgW~fs~~~~~~----pd~D~TA 491 (765)
-.+|+.+.+|.+++.+... +++....+++++||.+. +.+. . .|||-++....+- -...+=|
T Consensus 48 k~~~~nar~i~~~a~a~~~g~~~~l~~A~~~~~fl~~~-~~D~-~-----------~GG~~~s~d~dg~~~~~k~lyd~A 114 (421)
T 2zbl_A 48 THLWITARMLHVYSVAASMGRPGAYDLVDHGIKAMNGA-LRDK-K-----------YGGWYACVNDQGVVDASKQGYQHF 114 (421)
T ss_dssp EEHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTTT-TBCT-T-----------TSSBCSEEETTEEEECCEEHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHh-ccCc-C-----------CCeEEEEeCCCCCcCCchhHHHHH
Confidence 4579999999999887442 34567889999999886 4331 1 1455555321121 1234568
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHHHHHHHh-cccc-CCCcc
Q 043885 492 EGLNVSVLLSEMSYDLVGEAIPLNRLFEAVNVVLS-LQNS-SGGVA 535 (765)
Q Consensus 492 ~aL~aL~~l~~~~~~~~g~~~~~~~l~~av~~Lls-~Qn~-dGGw~ 535 (765)
.++.|++.. + ..|.+...+.+.+.++++.+ +..+ +|||-
T Consensus 115 f~i~al~~~-~----~tg~~~~l~~a~~~~~~l~~~~~d~~~Ggf~ 155 (421)
T 2zbl_A 115 FALLGAASA-V----TTGHPEARKLLDYTIEVIEKYFWSEEEQMCL 155 (421)
T ss_dssp HHHHHHHHH-H----TTTCTTHHHHHHHHHHHHHHHTEETTTTEEC
T ss_pred HHHHHHHHH-H----HhCCccHHHHHHHHHHHHHHHhccCCCCCee
Confidence 888888763 2 24566667777888888876 3444 68774
No 67
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=84.15 E-value=3.8 Score=44.67 Aligned_cols=131 Identities=10% Similarity=0.101 Sum_probs=76.2
Q ss_pred HHHHHHHHHHH-hccccCCCccc-cccCCCcchhhccccccccccccccCCccCcHHHHHHHHHhccCcCCccchhHHHH
Q 043885 515 NRLFEAVNVVL-SLQNSSGGVAS-YERTRSYAWMEMLNPVENFGESIIDYQYVECTSSTIQCLKSFTKHYPKHRRREIEE 592 (765)
Q Consensus 515 ~~l~~av~~Ll-s~Qn~dGGw~~-~e~~~~~~~le~l~p~e~f~~~~~d~~~~d~Ta~~l~aL~~~~~~~p~~r~~~i~~ 592 (765)
..+.+.+.|.+ ..+.++|||.. ...+.. |...+. ...-++++.|.+++..... ...++..+
T Consensus 13 ~~~~~~l~fw~~~~~D~~GGf~~~l~~dg~--------~~~~~~------k~l~~n~r~i~~~a~a~~~---~g~~~~l~ 75 (402)
T 3gt5_A 13 THISDTMAFYHPRCIDSAGGFFHYFRDDGS--------IYNATH------RHLVSSTRFVFNYAMAYLQ---FGTAEYLD 75 (402)
T ss_dssp HHHHHHHHHHTTTTBCTTSSBCCEECTTSC--------EEESSE------EEHHHHHHHHHHHHHHHHH---HCCHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCcCeeeEECCCCC--------CCCCCc------hhHHHHHHHHHHHHHHHHh---hCChHHHH
Confidence 34567788764 56778899964 322211 111111 1223578888887765321 11234567
Q ss_pred HHHHHHHHHHHh-cCCC-CCCCCCC-------CCCchhHHHHHHHHHHHcCCCC--CChHHHHHHHHHHHhcc-cC-CCc
Q 043885 593 FIAKGANFIESI-QRPD-GWWYGSW-------GVCFTYGTWFGIKGLVDSGRKY--ENSRSIRKACDFLLSKQ-LD-SGG 659 (765)
Q Consensus 593 ~I~rAv~~L~~~-Q~~D-GsW~g~w-------g~~~~YgT~~al~aL~aaG~~~--~~~~~i~rav~~Lls~Q-~~-DGG 659 (765)
..+++++||.+. ..++ |+|+-.. ...++|.-+|++.||+.+-.+. .-....++..++|.+.- .+ .||
T Consensus 76 ~A~~~~~fl~~~~~d~~~Gg~~~~~~dG~~~~~~~~lyd~Af~i~al~~~~~tgd~~~l~~A~~l~~~i~~~f~d~~~G~ 155 (402)
T 3gt5_A 76 AVHHGLSYVRDVHRNPATGGYAWTLCDDRVEDDTNHCYGLAFVMLAYSCGLKVGIKQAREWMDETWCLLERHFWDAEYGL 155 (402)
T ss_dssp HHHHHHHHHHHTTBCTTTSCBCSEEETTEEEECCEEHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHTEETTTTE
T ss_pred HHHHHHHHHHHhCccCCCCcEEEEeeCCCCCcCCcchHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHhcCCcCCC
Confidence 889999999875 4455 8887432 2246899999999998532221 12344556667777653 33 366
Q ss_pred ccc
Q 043885 660 WGE 662 (765)
Q Consensus 660 WGe 662 (765)
+-+
T Consensus 156 ~~~ 158 (402)
T 3gt5_A 156 YKD 158 (402)
T ss_dssp ECC
T ss_pred chh
Confidence 543
No 68
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=83.40 E-value=30 Score=37.80 Aligned_cols=203 Identities=11% Similarity=0.053 Sum_probs=101.3
Q ss_pred ccCCceeeccCC------Cchh-HHHHHHHHHHHcCCC---CcchHHHHHHHHHHHhhccccCCCCCC-ccccCCCCCCC
Q 043885 406 AEDGMKMQAYNG------SQLW-DTAFAVHAILSTNLV---DEYGSMLKKANNYIKTTQVRTKSFEDP-SCWYRHEFQEG 474 (765)
Q Consensus 406 ~~dG~~~q~~~g------s~~W-DTalai~AL~~ag~~---~~~~~~l~kA~~~L~~~Q~~~~~~Gd~-~~~~~~~~~Gg 474 (765)
.+.+..+|..+. .++| |+.+.+.+|..++.. +++...-+++.+++.+..++++ |.. ...+-+...|.
T Consensus 151 ~~~~g~iqsw~~~~~~~~~~~iID~~mni~~L~~A~~~~gd~~y~~~A~~ha~~~l~~~~r~d--gs~~h~~~~d~~~G~ 228 (397)
T 2zzr_A 151 QEKGGFIQAWGELGYKEHYRLIIDCLLNIQLLFFAYEQTGDEKYRQVAVNHFYASANNVVRDD--SSAFHTFYFDPETGE 228 (397)
T ss_dssp ETTTTEECCSSSTTCGGGCEEETTHHHHTHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTBCTT--SCBCSEEEECTTTCC
T ss_pred CcCCCEEEecccCCCCCCCceeechHhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCcCCC--CCeEEEEEeeCCCCC
Confidence 566677776531 1333 788888888866432 3445566778888988888753 321 11111111343
Q ss_pred CCCCCCCCCCCChhhh------HHHHHHHHHhccccccccCCCCChHHHHHHHHHHHhccccCCCccccccCCCcchhhc
Q 043885 475 WPFSSLDNGWIATDTT------AEGLNVSVLLSEMSYDLVGEAIPLNRLFEAVNVVLSLQNSSGGVASYERTRSYAWMEM 548 (765)
Q Consensus 475 W~fs~~~~~~pd~D~T------A~aL~aL~~l~~~~~~~~g~~~~~~~l~~av~~Lls~Qn~dGGw~~~e~~~~~~~le~ 548 (765)
+.....-+|+ .|+. |.++.+++.+-+. .+++..-+...+..++++..-..||+ +.|......
T Consensus 229 ~~~~~t~qGy--~dds~WaRGqAw~i~gl~~lY~~----T~d~~yL~~A~~la~~~l~~~~~d~~-pywdt~~~~----- 296 (397)
T 2zzr_A 229 PLKGVTRQGY--SDESSWARGQAWGIYGIPLSYRK----MKDYQQIILFKGMTNYFLNRLPEDKV-SYWDLIFTD----- 296 (397)
T ss_dssp EEEEECTTSS--STTSCBHHHHHHHHHHHHHHHHH----HCCHHHHHHHHHHHHHHHHTCCTTSC-CBSBTTCCT-----
T ss_pred cccCCccccc--CcchhhHHHHHHHHHHHHHHHHH----HCCHHHHHHHHHHHHHHHHhhHHhCC-ccccCCCCC-----
Confidence 3211111233 3455 8888888876432 12222233334445777766544454 344432211
Q ss_pred cccccccccccccCCccCcHHHH--HHHHHhccCcCCccchhH--HHHHHHHHHHHHHHhc------CCCCCC-------
Q 043885 549 LNPVENFGESIIDYQYVECTSST--IQCLKSFTKHYPKHRRRE--IEEFIAKGANFIESIQ------RPDGWW------- 611 (765)
Q Consensus 549 l~p~e~f~~~~~d~~~~d~Ta~~--l~aL~~~~~~~p~~r~~~--i~~~I~rAv~~L~~~Q------~~DGsW------- 611 (765)
+ |. ...|.++.+ ..+|..+.+..+....++ ..+...+.++-+.+.- +.+|--
T Consensus 297 ~-~~----------~~~D~Sa~aiaA~~Ll~L~~~~~~~~~~~~~Y~~~A~~~l~~l~~~y~~~~~~~~~glL~h~~~~~ 365 (397)
T 2zzr_A 297 G-SG----------QPRDTSATATAVCGIHEMLKYLPEVDPDKETYKYAMHTMLRSLIEQYSNNELIAGRPLLLHGVYSW 365 (397)
T ss_dssp T-SC----------CCBCHHHHHHHHHHHHHHHTTSCTTCTTHHHHHHHHHHHHHHHHHHTBCCCCCTTCCSBCCEEEET
T ss_pred C-CC----------CcCCCCHHHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHHHHhccCCCCCCceeeeceeeC
Confidence 0 00 112223333 334443333322211223 5666777777776543 122211
Q ss_pred CCC--CCCCchhHHHHHHHHHHHc
Q 043885 612 YGS--WGVCFTYGTWFGIKGLVDS 633 (765)
Q Consensus 612 ~g~--wg~~~~YgT~~al~aL~aa 633 (765)
... ..++-+||-.+-++||...
T Consensus 366 ~~~~~~d~~~~~gDYy~~Eal~r~ 389 (397)
T 2zzr_A 366 HSGKGVDEGNIWGDYYYLEALIRF 389 (397)
T ss_dssp TTTEEEEECBHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCcchHHHHHHHHHHHH
Confidence 111 1246789999999999865
No 69
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=82.55 E-value=11 Score=41.01 Aligned_cols=221 Identities=15% Similarity=0.172 Sum_probs=110.3
Q ss_pred CCCCChHHHHHHHHHHHhccccC-CCccccccCCCcchhhccccccccccccccCCccCcHHHHHHHHHhccCcCCccch
Q 043885 509 GEAIPLNRLFEAVNVVLSLQNSS-GGVASYERTRSYAWMEMLNPVENFGESIIDYQYVECTSSTIQCLKSFTKHYPKHRR 587 (765)
Q Consensus 509 g~~~~~~~l~~av~~Lls~Qn~d-GGw~~~e~~~~~~~le~l~p~e~f~~~~~d~~~~d~Ta~~l~aL~~~~~~~p~~r~ 587 (765)
|.+...+.+.++.++|.+.=++. |+..+|....++.+ .+... +||- +.|.+|....+.. ..
T Consensus 105 g~~~~~~~~~~aA~~L~~r~~~~~g~i~sw~~~~~~~~---------~~~~i-----ID~m-mni~~L~~A~~~~---gd 166 (377)
T 2ahf_A 105 KDESARKLALDAADVLMRRWRADAGIIQAWGPKGDPEN---------GGRII-----IDCL-LNLPLLLWAGEQT---GD 166 (377)
T ss_dssp CCHHHHHHHHHHHHHHHTTEETTTTEECCBSSTTCTTT---------TTEEE-----GGGG-GGHHHHHHHHHHH---CC
T ss_pred CCHHHHHHHHHHHHHHHHhCCCCCCeEEeccCCCCCCC---------CceEE-----echH-HHHHHHHHHHHHh---CC
Confidence 45556788899999999877776 54566653211110 00111 2232 3366665433211 11
Q ss_pred hHHHHHHHHHHHHHHHhc-CCCCCCC---------CCC-------C----CCchhHHHHHHHHHHHcCCCCCCh---HHH
Q 043885 588 REIEEFIAKGANFIESIQ-RPDGWWY---------GSW-------G----VCFTYGTWFGIKGLVDSGRKYENS---RSI 643 (765)
Q Consensus 588 ~~i~~~I~rAv~~L~~~Q-~~DGsW~---------g~w-------g----~~~~YgT~~al~aL~aaG~~~~~~---~~i 643 (765)
++..+...++++++.+.. ++||+.+ |.. | .+..-|.++++.||...=+.-.+. ...
T Consensus 167 ~~y~~~A~~~a~~~l~~~~r~dgs~~h~~~~D~~tG~~~~~~t~qG~~dds~WaRGqAw~i~gl~~ly~~T~d~~yL~~A 246 (377)
T 2ahf_A 167 PEYRRVAEAHALKSRRFLVRGDDSSYHTFYFDPENGNAIRGGTHQGNTDGSTWTRGQAWGIYGFALNSRYLGNADLLETA 246 (377)
T ss_dssp THHHHHHHHHHHHHHHHTBBTTSCBCSEEEECTTTCCEEEEECSSSSSTTSCBHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCeeeCCCcCCcCCcchhHHHHHHHHHHHHHHHHHHCChHHHHHH
Confidence 234566677777776654 5666542 111 1 122336788888887531110122 345
Q ss_pred HHHHHHHHhcccCCCc--cccccccccccccccCCCCCCcHHHHHHHHHHHHHhCCCC--C---Cc---HHHHHHHHHHH
Q 043885 644 RKACDFLLSKQLDSGG--WGESYVSCVDRVYTNLEGNKAHNVNTAWAMLALIEAGQAH--R---DP---TPLHRAARVLI 713 (765)
Q Consensus 644 ~rav~~Lls~Q~~DGG--WGes~~s~~~~~Y~~l~g~~S~~~~TAwALlAL~~aG~~~--~---d~---~~i~rav~~L~ 713 (765)
++.+++++++..+||+ |--.. ++ +.+..-+++.+|-+..+|+.....- . +. +..++.++.|.
T Consensus 247 ~~la~~~l~~~~~d~~pywd~~~---~~-----~~~~~~d~Sa~aiaA~~Ll~L~~~~~~~~~~~~~Y~~~A~~~l~~l~ 318 (377)
T 2ahf_A 247 KRMARHFLARVPEDGVVYWDFEV---PQ-----EPSSYRDSSASAITACGLLEIASQLDESDPERQRFIDAAKTTVTALR 318 (377)
T ss_dssp HHHHHHHHTTCCTTSSCBSBTTS---CC-----CTTSCBCHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHhCCcccccCC---Cc-----cCCCccCCCHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHH
Confidence 5668899999877888 32111 10 0111224455544444444332211 0 11 24566777776
Q ss_pred hcC------cCCCCCCCCccccccCCc-cccccCCccchHHHHHHHHHHHh
Q 043885 714 NSQ------MENGDFPQQEIMGSFTRN-CMISYSAWRNIFPIWALGAFYNR 757 (765)
Q Consensus 714 ~~Q------~~dG~w~~~~~~g~f~~~-~~~~Y~~Yr~~fpl~ALg~y~~~ 757 (765)
+.- ..+|-.-. -++..|.. -..+--.|-++|=+-||-+|.+.
T Consensus 319 ~~y~~~~~~~~~g~L~h--~~~~~~~~~~~d~~~~ygDy~~~Eal~r~~~~ 367 (377)
T 2ahf_A 319 DGYAERDDGEAEGFIRR--GSYHVRGGISPDDYTIWGDYYYLEALLRLERG 367 (377)
T ss_dssp HHTBCCCCSSCCCSBSC--BCSBTTTTBSSSBCBHHHHHHHHHHHHHHHHC
T ss_pred HHHhcCCCCCCCeEEec--ccccCCCCCCCCcCccHHHHHHHHHHHHHHcC
Confidence 643 12222222 11222221 12233457788999999999763
No 70
>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A*
Probab=79.32 E-value=9.1 Score=47.03 Aligned_cols=112 Identities=11% Similarity=0.076 Sum_probs=73.1
Q ss_pred hhhHHHHHHHHHhccccccccCCCCChHHHHHHHHHHHhcc-ccCCCccc-cccCCCcchhhccccccccccccccCCcc
Q 043885 488 DTTAEGLNVSVLLSEMSYDLVGEAIPLNRLFEAVNVVLSLQ-NSSGGVAS-YERTRSYAWMEMLNPVENFGESIIDYQYV 565 (765)
Q Consensus 488 D~TA~aL~aL~~l~~~~~~~~g~~~~~~~l~~av~~Lls~Q-n~dGGw~~-~e~~~~~~~le~l~p~e~f~~~~~d~~~~ 565 (765)
=|++.+++||+.+. ..+..++.++||.+.| +++|.|.. |..+.... ++ ..-.
T Consensus 332 RDaa~t~~all~~G-----------~~e~A~~~l~~L~~~Q~~~~G~~~~~y~i~G~~~----------w~-----~~Q~ 385 (1020)
T 1ulv_A 332 RDMYQSVTALLAAG-----------DEEAAARGVEWLFTYQQQPDGHFPQTSRVDGTIG----------QN-----GIQL 385 (1020)
T ss_dssp HHHHHHHHHHHHHT-----------CHHHHHHHHHHHHHHTCCTTSCCCSCBCTTSCBC----------CC-----CCBT
T ss_pred chHHHHHHHHHHcC-----------CHHHHHHHHHHHHHHhcCCCCCeeeEEecCCCcC----------CC-----CccC
Confidence 46888888888763 3466788899999999 88998842 22221111 11 1245
Q ss_pred CcHHHHHHHHHhccCcCCccchhHHHH-HHHHHHHHHHHhcC--CCCCCCCCCCCCchhHHHHHHHHHH
Q 043885 566 ECTSSTIQCLKSFTKHYPKHRRREIEE-FIAKGANFIESIQR--PDGWWYGSWGVCFTYGTWFGIKGLV 631 (765)
Q Consensus 566 d~Ta~~l~aL~~~~~~~p~~r~~~i~~-~I~rAv~~L~~~Q~--~DGsW~g~wg~~~~YgT~~al~aL~ 631 (765)
|.|+..|.++..+.+. + .++-+ .|+++++|+.+... ..|-|..+.| .++|..+.+..||.
T Consensus 386 D~~g~~l~~~~~~~~~--d---~~~w~~~v~~al~~i~~~g~~~~~~~WEe~~g-~~~~t~~~~~~AL~ 448 (1020)
T 1ulv_A 386 DETAFPILLANQIGRT--D---AGFYRNELKPAADYLVAAGPKTPQERWEETGG-YSTSTLASQIAALA 448 (1020)
T ss_dssp HHHHHHHHHHHHHTCC--C---HHHHHHTHHHHHHHHHHHCSCBSBCTTSSCCB-EEHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHhc--C---HHHHHHHHHHHHHHHHHhCCCCChhhhcccCC-cCHHHHHHHHHHHH
Confidence 8999999988877542 2 33445 89999999998752 2244554444 35666666666665
No 71
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=78.87 E-value=20 Score=39.19 Aligned_cols=221 Identities=17% Similarity=0.180 Sum_probs=112.5
Q ss_pred CCCCChHHHHHHHHHHHhccccCCCc-cccccCCCcchhhccccccccccccccCCccCcHHHHHHHHHhccCcCCccch
Q 043885 509 GEAIPLNRLFEAVNVVLSLQNSSGGV-ASYERTRSYAWMEMLNPVENFGESIIDYQYVECTSSTIQCLKSFTKHYPKHRR 587 (765)
Q Consensus 509 g~~~~~~~l~~av~~Lls~Qn~dGGw-~~~e~~~~~~~le~l~p~e~f~~~~~d~~~~d~Ta~~l~aL~~~~~~~p~~r~ 587 (765)
|.+...+.+.++.++|.+.=++.||+ .+|....+.. +++....+.+-|.+|....+... .
T Consensus 131 g~~~~~~~~~~aA~~L~~r~~~~~g~iqsw~~~~~~~----------------~~~~iID~~mni~~L~~A~~~~g---d 191 (397)
T 2zzr_A 131 GDVKALEATIKAADKLMERYQEKGGFIQAWGELGYKE----------------HYRLIIDCLLNIQLLFFAYEQTG---D 191 (397)
T ss_dssp CCHHHHHHHHHHHHHHHTTEETTTTEECCSSSTTCGG----------------GCEEETTHHHHTHHHHHHHHHHC---C
T ss_pred CCHHHHHHHHHHHHHHHHHhCcCCCEEEecccCCCCC----------------CCceeechHhHHHHHHHHHHHhC---C
Confidence 44456788999999998876776554 5664221110 11222234445667765443211 2
Q ss_pred hHHHHHHHHHHHHHHHhc-CCCCCCCC---------CC-------CC----CchhHHHHHHHHHHHc----CCCCCChHH
Q 043885 588 REIEEFIAKGANFIESIQ-RPDGWWYG---------SW-------GV----CFTYGTWFGIKGLVDS----GRKYENSRS 642 (765)
Q Consensus 588 ~~i~~~I~rAv~~L~~~Q-~~DGsW~g---------~w-------g~----~~~YgT~~al~aL~aa----G~~~~~~~~ 642 (765)
++..+...++++++.+.. ++||+-+- .+ |. +..-|.++++.||... |.. .--+.
T Consensus 192 ~~y~~~A~~ha~~~l~~~~r~dgs~~h~~~~d~~~G~~~~~~t~qGy~dds~WaRGqAw~i~gl~~lY~~T~d~-~yL~~ 270 (397)
T 2zzr_A 192 EKYRQVAVNHFYASANNVVRDDSSAFHTFYFDPETGEPLKGVTRQGYSDESSWARGQAWGIYGIPLSYRKMKDY-QQIIL 270 (397)
T ss_dssp HHHHHHHHHHHHHHHHHTBCTTSCBCSEEEECTTTCCEEEEECTTSSSTTSCBHHHHHHHHHHHHHHHHHHCCH-HHHHH
T ss_pred HHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCcccCCcccccCcchhhHHHHHHHHHHHHHHHHHHCCH-HHHHH
Confidence 234455555666665544 55565431 11 11 1122778999998753 221 11233
Q ss_pred HHHHHHHHHhcccCCCc--cccccccccccccccCCCCCCcHHHHHHHHHHHHHhCCC-CC---Cc----HHHHHHHHHH
Q 043885 643 IRKACDFLLSKQLDSGG--WGESYVSCVDRVYTNLEGNKAHNVNTAWAMLALIEAGQA-HR---DP----TPLHRAARVL 712 (765)
Q Consensus 643 i~rav~~Lls~Q~~DGG--WGes~~s~~~~~Y~~l~g~~S~~~~TAwALlAL~~aG~~-~~---d~----~~i~rav~~L 712 (765)
.++.+++++++-.+||+ |--. ..+. + ...-+++.+|-|..+|+..... +. +. +..++.++.|
T Consensus 271 A~~la~~~l~~~~~d~~pywdt~---~~~~---~--~~~~D~Sa~aiaA~~Ll~L~~~~~~~~~~~~~Y~~~A~~~l~~l 342 (397)
T 2zzr_A 271 FKGMTNYFLNRLPEDKVSYWDLI---FTDG---S--GQPRDTSATATAVCGIHEMLKYLPEVDPDKETYKYAMHTMLRSL 342 (397)
T ss_dssp HHHHHHHHHHTCCTTSCCBSBTT---CCTT---S--CCCBCHHHHHHHHHHHHHHHTTSCTTCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHhCCccccCC---CCCC---C--CCcCCCCHHHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHH
Confidence 45557788887656776 3211 1100 1 1223466676666666654432 11 11 2345666666
Q ss_pred HhcCc-C---CCCCCCCccccccCCccccc-cCCccchHHHHHHHHHHHh
Q 043885 713 INSQM-E---NGDFPQQEIMGSFTRNCMIS-YSAWRNIFPIWALGAFYNR 757 (765)
Q Consensus 713 ~~~Q~-~---dG~w~~~~~~g~f~~~~~~~-Y~~Yr~~fpl~ALg~y~~~ 757 (765)
.+.-. . +++.--..-++..|.+-.+. --.|..+|=|-||.||.+.
T Consensus 343 ~~~y~~~~~~~~~glL~h~~~~~~~~~~~d~~~~~gDYy~~Eal~r~~~~ 392 (397)
T 2zzr_A 343 IEQYSNNELIAGRPLLLHGVYSWHSGKGVDEGNIWGDYYYLEALIRFYKD 392 (397)
T ss_dssp HHHTBCCCCCTTCCSBCCEEEETTTTEEEEECBHHHHHHHHHHHHHHHSC
T ss_pred HHHHhccCCCCCCceeeeceeeCCCCCCCCCCcchHHHHHHHHHHHHhcC
Confidence 65431 1 22222112233344432222 2358899999999999763
No 72
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=77.81 E-value=64 Score=34.51 Aligned_cols=101 Identities=12% Similarity=-0.010 Sum_probs=59.5
Q ss_pred CCchhHHHHHHHHHHHcCC------CCcchHHHHHHHHHHHhhccccCCCCCCccccCCCCCC-CCCCCCCCCC-----C
Q 043885 417 GSQLWDTAFAVHAILSTNL------VDEYGSMLKKANNYIKTTQVRTKSFEDPSCWYRHEFQE-GWPFSSLDNG-----W 484 (765)
Q Consensus 417 gs~~WDTalai~AL~~ag~------~~~~~~~l~kA~~~L~~~Q~~~~~~Gd~~~~~~~~~~G-gW~fs~~~~~-----~ 484 (765)
...+|+.+.++.+++.+.. .+++....+++++||.+.-.. +.| | ||-++....+ -
T Consensus 52 ~k~l~~nar~l~~~a~a~~~~~~~~~~~~l~~A~~~~~fl~~~~~d--~~g-----------g~g~~~s~d~dg~~~~~~ 118 (402)
T 1fp3_A 52 LKYVWLQGRQVWMYCRLYRKLERFHRPELLDAAKAGGEFLLRHARV--APP-----------EKKCAFVLTRDGRPVKVQ 118 (402)
T ss_dssp CEEHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHTBS--STT-----------SCCBCSEECTTSCEEECC
T ss_pred ccchhhhHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHhccC--cCC-----------CCceEEEECCCCCccccc
Confidence 3568999999999875431 334567889999999986422 112 2 4544431112 1
Q ss_pred CChhhhHHHHHHHHHhccccccccCCCCChHHHHHHHHHHHhcc--ccCCCc
Q 043885 485 IATDTTAEGLNVSVLLSEMSYDLVGEAIPLNRLFEAVNVVLSLQ--NSSGGV 534 (765)
Q Consensus 485 pd~D~TA~aL~aL~~l~~~~~~~~g~~~~~~~l~~av~~Lls~Q--n~dGGw 534 (765)
-...+=|..+.|+..+.+. .|++...+...+.++++++.- +++|+|
T Consensus 119 ~~lyd~af~~~a~~~~~~a----tgd~~~~~~A~~l~~~~~~~~~d~~~G~f 166 (402)
T 1fp3_A 119 RSIFSECFYTMAMNELWRV----TAEARYQSEAVDMMDQIVHWVREDPSGLG 166 (402)
T ss_dssp SSSHHHHHHHHHHHHHHHH----HCCHHHHHHHHHHHHHHHHHHHTCGGGGC
T ss_pred cchHHHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHHHHHhccCCCccc
Confidence 2345577888888766542 233333444555566666543 456766
No 73
>1lf6_A Glucoamylase; (alpha/alpha) barrel, 6 alpha-helical hairpin torroid, super beta sandwich, carbohydrase family GH15; 2.10A {Thermoanaerobacteriumthermosaccharolyticum} SCOP: a.102.1.5 b.30.5.5 PDB: 1lf9_A*
Probab=76.70 E-value=17 Score=42.55 Aligned_cols=94 Identities=10% Similarity=0.061 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHcCCCCCChHHHHHHHHHHHhcccCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHHhCCCCCC
Q 043885 622 GTWFGIKGLVDSGRKYENSRSIRKACDFLLSKQLDSGGWGESYVSCVDRVYTNLEGNKAHNVNTAWAMLALIEAGQAHRD 701 (765)
Q Consensus 622 gT~~al~aL~aaG~~~~~~~~i~rav~~Lls~Q~~DGGWGes~~s~~~~~Y~~l~g~~S~~~~TAwALlAL~~aG~~~~d 701 (765)
-..+.+++|..+|. .+..++.++||.+.|++||+|-..+.....+.| +....-.|+..|+++....... -
T Consensus 344 D~~~~~~al~~~G~----~~~a~~~l~~l~~~q~~~G~~~~~~~~~G~p~w-----~~~Q~D~~g~~l~~~~~~~~~g-~ 413 (684)
T 1lf6_A 344 DLYHVANAFIAAGD----VDSANRSLDYLAKVVKDNGMIPQNTWISGKPYW-----TGIQLDEQADPIILSYRLKRYD-L 413 (684)
T ss_dssp HHHHHHHHHHHHTC----HHHHHHHHHHHHHHHHHHSSCCSCBCTTSCBCC-----CCCCHHHHHHHHHHHHHTTCGG-G
T ss_pred HHHHHHHHHHHcCC----HHHHHHHHHHHHhhcCCCCCcccceeCCCCccc-----CCccccchHHHHHHHHHHHHcC-c
Confidence 35778888888884 356789999999999999998432211111222 2245778888888876543322 1
Q ss_pred cHH-HHHHHHHHHhcC--cCCCCCCCC
Q 043885 702 PTP-LHRAARVLINSQ--MENGDFPQQ 725 (765)
Q Consensus 702 ~~~-i~rav~~L~~~Q--~~dG~w~~~ 725 (765)
-+. ++++++|+.+.. ...|.|.+.
T Consensus 414 ~~~~v~~al~~i~~~~~~~~~g~WE~~ 440 (684)
T 1lf6_A 414 YDSLVKPLADFIIKIGPKTGQERWEEI 440 (684)
T ss_dssp TTTTHHHHHHHHHHHCSSBSSCTTSSC
T ss_pred hHHHHHHHHHHHHHhCCCCCccccccc
Confidence 135 999999999864 345678764
No 74
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*
Probab=72.40 E-value=13 Score=42.90 Aligned_cols=132 Identities=12% Similarity=0.015 Sum_probs=67.8
Q ss_pred hhhHHHHHHHHHhccccccccCCCCChHHHHHHHHHHHh---cc---ccCCCcccc-ccCCCcchhhccccccccccccc
Q 043885 488 DTTAEGLNVSVLLSEMSYDLVGEAIPLNRLFEAVNVVLS---LQ---NSSGGVASY-ERTRSYAWMEMLNPVENFGESII 560 (765)
Q Consensus 488 D~TA~aL~aL~~l~~~~~~~~g~~~~~~~l~~av~~Lls---~Q---n~dGGw~~~-e~~~~~~~le~l~p~e~f~~~~~ 560 (765)
=|.|.+++||+.+-. ..| ..+...+..+||.. +| ++||.|..- .... +.+ .++-.. | +...
T Consensus 53 RDaa~t~~aL~~~~~----~~G---~~~~a~~~~~~l~~~~~lQ~~y~~~G~~~~~~~l~E-~~~--~ldG~~-~-~~~w 120 (599)
T 2vn4_A 53 RDSALVFKNLIDRFT----ETY---DAGLQRRIEQYITAQVTLQGLSNPSGSLADGSGLGE-PKF--ELTLKP-F-TGNW 120 (599)
T ss_dssp HHHHHHHHHHHHHHH----HSB---CHHHHHHHHHHHHHHHHHHHCCBTTBCSTTSGGGGC-CEE--CTTSCB-C-CSCC
T ss_pred hhHHHHHHHHHHHHH----hCC---CHHHHHHHHHHHhcccceeeeeCCCCCcccccCcCc-eEE--ecCCcc-c-cCcC
Confidence 468888888883210 012 34566778899974 78 899998411 0000 000 011000 1 0011
Q ss_pred cCCccCc-----HHHHHHHHHhccCcCCccchhHHHHHHHHHHHHHHHhcCCC--CCCCCCCCCCchhHHHHHHHHHHH
Q 043885 561 DYQYVEC-----TSSTIQCLKSFTKHYPKHRRREIEEFIAKGANFIESIQRPD--GWWYGSWGVCFTYGTWFGIKGLVD 632 (765)
Q Consensus 561 d~~~~d~-----Ta~~l~aL~~~~~~~p~~r~~~i~~~I~rAv~~L~~~Q~~D--GsW~g~wg~~~~YgT~~al~aL~a 632 (765)
..+--|. ++.++.++-.........-...+-+.|+++++|+.+..+.. |-|.-+-| .++|..+.+..||.+
T Consensus 121 ~~~Q~D~~glr~~~~~~~~~~~~~~g~~~~~~~~~w~~v~~~l~~v~~~w~~~d~dlWEer~g-~~~~T~~~~~~aL~~ 198 (599)
T 2vn4_A 121 GRPQRDGPALRAIALIGYSKWLINNNYQSTVSNVIWPIVRNDLNYVAQYWNQTGFDLWEEVNG-SSFFTVANQHRALVE 198 (599)
T ss_dssp SCCCTHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHTTSCEECTTSCCEE-EEHHHHHHHHHHHHH
T ss_pred CCeeccccchhHHHHHHHHHHHHHhCCcccccHHHHHHHHHHHHHHHHhCCCCCCCeeeecCC-cchHHHHHHHHHHHH
Confidence 1233445 44444443321111010011124578999999998877643 55655544 478877777778853
No 75
>3rrs_A Cellobiose phosphorylase; GH94, alpha barrel, disaccharide phosphorylase, transferase; 1.70A {Cellulomonas uda} PDB: 3rsy_A* 3s4a_A* 3s4b_A* 3s4c_A* 3s4d_A* 2cqs_A* 2cqt_A* 3qfy_A* 3qfz_A* 3qg0_A* 3act_A* 3acs_A* 3afj_A*
Probab=72.27 E-value=69 Score=38.32 Aligned_cols=101 Identities=11% Similarity=-0.016 Sum_probs=57.8
Q ss_pred hhHHHHHHHHHHHcCCCCcchHHHHHHHHHHHhhccccCCCCCCccccCCCCCCCCCCCCCCCCCCChhhhHHHHHHHHH
Q 043885 420 LWDTAFAVHAILSTNLVDEYGSMLKKANNYIKTTQVRTKSFEDPSCWYRHEFQEGWPFSSLDNGWIATDTTAEGLNVSVL 499 (765)
Q Consensus 420 ~WDTalai~AL~~ag~~~~~~~~l~kA~~~L~~~Q~~~~~~Gd~~~~~~~~~~GgW~fs~~~~~~pd~D~TA~aL~aL~~ 499 (765)
..|++..++||.-+. .+..++.+..+.+.|..+ |+....+.... +.+ ..+....-+|++.--+.|+..
T Consensus 366 ~RD~~qd~~~~~~~~-----pe~ar~~il~~~~~Q~~d---G~v~h~~~p~~--~~g--~~~~~~~~~D~~lWl~~av~~ 433 (822)
T 3rrs_A 366 FRDSNQDLLGFVHLI-----PERARERIIDIASTQFAD---GSAYHQYQPLT--KRG--NNDIGSGFNDDPLWLIAGTAA 433 (822)
T ss_dssp HHHHHHHHHHHTTTC-----HHHHHHHHHHHHTTCCTT---SCCCSEEETTT--TEE--CTTTCSCBTTHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhcC-----HHHHHHHHHHHHHhhccc---CcccceecCcC--CCC--ccCCCCcccchHhHHHHHHHH
Confidence 489999999987543 346677788888899876 77654432111 111 111112347888777777754
Q ss_pred hcccc------ccccCCC-------CChHHHHHHHHHHHhccccCC
Q 043885 500 LSEMS------YDLVGEA-------IPLNRLFEAVNVVLSLQNSSG 532 (765)
Q Consensus 500 l~~~~------~~~~g~~-------~~~~~l~~av~~Lls~Qn~dG 532 (765)
.-+.. .+.++.. -.-+.+.++++|++....++|
T Consensus 434 Yi~~TGD~~~L~e~~p~~~~~~~~~tl~eh~~ra~~~~~~~~g~~G 479 (822)
T 3rrs_A 434 YIKETGDFSILDEPVPFDNEPGSEVPLFEHLTRSFEFTVTHRGPHG 479 (822)
T ss_dssp HHHHHCCGGGGGSEECSTTCTTCCEEHHHHHHHHHHHHHHSBCTTS
T ss_pred HHHHHCCHHHHHhhhhhhccccccccHHHHHHHHHHHHHhcCCCCC
Confidence 31100 1111110 013589999999997655553
No 76
>2fba_A Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hydrolase; 1.10A {Saccharomycopsis fibuligera} SCOP: a.102.1.1 PDB: 1ayx_A* 2f6d_A
Probab=68.39 E-value=13 Score=41.90 Aligned_cols=127 Identities=10% Similarity=0.100 Sum_probs=71.8
Q ss_pred hhhHHHHHHHHHhccccccccCCC--CChHHHHHHHHH---HHhccccCCCcc----------ccccCCCcchhhccccc
Q 043885 488 DTTAEGLNVSVLLSEMSYDLVGEA--IPLNRLFEAVNV---VLSLQNSSGGVA----------SYERTRSYAWMEMLNPV 552 (765)
Q Consensus 488 D~TA~aL~aL~~l~~~~~~~~g~~--~~~~~l~~av~~---Lls~Qn~dGGw~----------~~e~~~~~~~le~l~p~ 552 (765)
=|.|.+++||+.+... +.. -..+.+++-++| |....+++|.|. -|..+.+.
T Consensus 69 RDaa~t~~aL~~~g~~-----~~~~~~l~~~a~~y~~~~~~lq~~~~~~G~~~~~~~~glgep~y~vdG~~--------- 134 (492)
T 2fba_A 69 RDSAITFLTVLSELED-----NNFNTTLAKAVEYYINTSYNLQRTSNPSGSFDDENHKGLGEPKFNTDGSA--------- 134 (492)
T ss_dssp HHHHHHHHHHHHHHHH-----TTTCHHHHHHHHHHHHHHHHHHTSCBTTBCTTSGGGGGGGCCEECTTSCB---------
T ss_pred chHHHHHHHHHHhCcc-----cccccchHHHHHHHHHHHHHHhcccCCCCCcCcccccccCceeeccCCCc---------
Confidence 4688888888876531 110 013455556665 444448889886 23222110
Q ss_pred cccccccccCCccCcHHHHHHHHHhccCcC--Ccc--------------chhHH-HHHHHHHHHHHHHhcCC-C-CCCCC
Q 043885 553 ENFGESIIDYQYVECTSSTIQCLKSFTKHY--PKH--------------RRREI-EEFIAKGANFIESIQRP-D-GWWYG 613 (765)
Q Consensus 553 e~f~~~~~d~~~~d~Ta~~l~aL~~~~~~~--p~~--------------r~~~i-~~~I~rAv~~L~~~Q~~-D-GsW~g 613 (765)
|. .-...+--|.++.++.++..+.+.. .+. ..+++ .+.|+++++|+.+.-+. | |-|..
T Consensus 135 --~~-~~w~~~Q~D~~g~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~v~~~w~~pd~dlWEe 211 (492)
T 2fba_A 135 --YT-GAWGRPQNDGPALRAYAISRYLNDVNSLNEGKLVLTDSGDINFSSTEDIYKNIIKPDLEYVIGYWDSTGFDLWEE 211 (492)
T ss_dssp --CC-SCCSCCBTTHHHHHHHHHHHHHHHHHHHSTTCCSSTTCTTCSCSSHHHHHHHTHHHHHHHHHHHTTSCEECTTSC
T ss_pred --CC-cccCCccccchhHHHHHHHHHHHHhhccccchhhhhhhccccccccHHHHHHHHHHHHHHHHHhcCCCCCCCcCc
Confidence 10 0112345688999887776442110 000 00233 47899999999886553 3 66765
Q ss_pred CCCCCchhHHHHHHHHHHH
Q 043885 614 SWGVCFTYGTWFGIKGLVD 632 (765)
Q Consensus 614 ~wg~~~~YgT~~al~aL~a 632 (765)
+-|. ++|..+.+..||.+
T Consensus 212 r~g~-~~~T~~~~~~AL~~ 229 (492)
T 2fba_A 212 NQGR-HFFTSLVQQKALAY 229 (492)
T ss_dssp CEEC-CHHHHHHHHHHHHH
T ss_pred cCCC-ChHHHHHHHHHHHH
Confidence 5554 88887777788854
No 77
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=67.38 E-value=18 Score=39.07 Aligned_cols=128 Identities=12% Similarity=0.033 Sum_probs=70.9
Q ss_pred HHHHHHHHH-hccc-cCCCc-cccccCCCcchhhccccccccccccccCCccCcHHHHHHHHHhccCcCCccchhHHHHH
Q 043885 517 LFEAVNVVL-SLQN-SSGGV-ASYERTRSYAWMEMLNPVENFGESIIDYQYVECTSSTIQCLKSFTKHYPKHRRREIEEF 593 (765)
Q Consensus 517 l~~av~~Ll-s~Qn-~dGGw-~~~e~~~~~~~le~l~p~e~f~~~~~d~~~~d~Ta~~l~aL~~~~~~~p~~r~~~i~~~ 593 (765)
+.+++.++. ...+ ..||| ..+..+..+ . |.+ ......++.|.+++......+....++..+.
T Consensus 19 ~~~~l~~w~~~~~D~~~GGf~~~~~~dg~~-----~-~~~---------k~l~~nar~l~~~a~a~~~~~~~~~~~~l~~ 83 (402)
T 1fp3_A 19 LDRVMAFWLEHSHDREHGGFFTCLGRDGRV-----Y-DDL---------KYVWLQGRQVWMYCRLYRKLERFHRPELLDA 83 (402)
T ss_dssp HHHHHHHHHHHSBCTTTSSBCCCBCTTSCB-----S-CCC---------EEHHHHHHHHHHHHHHHHHCGGGCCHHHHHH
T ss_pred HHHHHHHhhccCCCCCCCCEeeEECCCCCC-----C-CCc---------cchhhhHHHHHHHHHHHHHhcccCCHHHHHH
Confidence 577888887 5666 46888 433332211 0 111 1233467777777643321100122456688
Q ss_pred HHHHHHHHHHh-cCCCC--CCCCC----C----CCCchhHHHHHHHHHHHc----CCCCCChHHHHHHHHHHHhcc--cC
Q 043885 594 IAKGANFIESI-QRPDG--WWYGS----W----GVCFTYGTWFGIKGLVDS----GRKYENSRSIRKACDFLLSKQ--LD 656 (765)
Q Consensus 594 I~rAv~~L~~~-Q~~DG--sW~g~----w----g~~~~YgT~~al~aL~aa----G~~~~~~~~i~rav~~Lls~Q--~~ 656 (765)
+.++++||.+. +.++| +|+-. | ...+.|.-+|++.|+..+ |.. ...+...+..+++++.- .+
T Consensus 84 A~~~~~fl~~~~~d~~gg~g~~~s~d~dg~~~~~~~~lyd~af~~~a~~~~~~atgd~-~~~~~A~~l~~~~~~~~~d~~ 162 (402)
T 1fp3_A 84 AKAGGEFLLRHARVAPPEKKCAFVLTRDGRPVKVQRSIFSECFYTMAMNELWRVTAEA-RYQSEAVDMMDQIVHWVREDP 162 (402)
T ss_dssp HHHHHHHHHHHTBSSTTSCCBCSEECTTSCEEECCSSSHHHHHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHTCG
T ss_pred HHHHHHHHHHhccCcCCCCceEEEECCCCCccccccchHHHHHHHHHHHHHHHHhCCH-HHHHHHHHHHHHHHHHhccCC
Confidence 99999999887 55564 67632 2 134678888888888632 322 11233445556666544 35
Q ss_pred CCcc
Q 043885 657 SGGW 660 (765)
Q Consensus 657 DGGW 660 (765)
.|+|
T Consensus 163 ~G~f 166 (402)
T 1fp3_A 163 SGLG 166 (402)
T ss_dssp GGGC
T ss_pred Cccc
Confidence 5666
No 78
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=65.04 E-value=29 Score=39.90 Aligned_cols=85 Identities=9% Similarity=0.115 Sum_probs=45.2
Q ss_pred HHHHHHHHHHhccccCCCccccccCCCcchhhccccccc--cc--------cccccCCccCcHHHHHHHHHhccCc--CC
Q 043885 516 RLFEAVNVVLSLQNSSGGVASYERTRSYAWMEMLNPVEN--FG--------ESIIDYQYVECTSSTIQCLKSFTKH--YP 583 (765)
Q Consensus 516 ~l~~av~~Lls~Qn~dGGw~~~e~~~~~~~le~l~p~e~--f~--------~~~~d~~~~d~Ta~~l~aL~~~~~~--~p 583 (765)
.++=+++||++||.++|++-.-..+. |-+...+-+. +. ...++ ....++..+.||+..... .+
T Consensus 195 E~rWg~D~llkm~~~~g~~y~qVgd~---W~~d~~~R~~~~~~~~~~~~~~~y~~~--~~~~agl~aAALA~Asrvf~d~ 269 (586)
T 3h7l_A 195 EALFGADFLVRMQNEKGFFYMTVFDK---WSKDTAQREICAYETQLGHKFDDYQAG--FRQGGGVAIAALAAASRLGVHG 269 (586)
T ss_dssp HHHHHHHHHHHTBCTTSCBBCEEECT---TCCCGGGCEEEEEETTTTEEESCCBCC--GGGTHHHHHHHHHHHTTSSSCS
T ss_pred HHHHHHHHHHhcccCCCeEEEEecCC---CCCCCCccccccccCCCCCCCcceecC--CCCcHHHHHHHHHHHhcccCCC
Confidence 44456899999999999863222221 3221000000 10 01111 123456667777766544 44
Q ss_pred ccchhHHHHHHHHHHHHHHHhc
Q 043885 584 KHRRREIEEFIAKGANFIESIQ 605 (765)
Q Consensus 584 ~~r~~~i~~~I~rAv~~L~~~Q 605 (765)
.+..++.-.+.+++.+|+.+..
T Consensus 270 ~~~a~~~L~aA~~a~~fa~~~~ 291 (586)
T 3h7l_A 270 EYDQQKYRNAAENGYWHLKEHN 291 (586)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHH
T ss_pred CcChHHHHHHHHHHHHHHHhcC
Confidence 4544455667778888987753
No 79
>3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum}
Probab=63.34 E-value=1.7e+02 Score=34.77 Aligned_cols=101 Identities=11% Similarity=0.036 Sum_probs=57.5
Q ss_pred hhHHHHHHHHHHHcCCCCcchHHHHHHHHHHHhhccccCCCCCCccccCCCCCCCCCCCCCCCCCCChhhhHHHHHHHHH
Q 043885 420 LWDTAFAVHAILSTNLVDEYGSMLKKANNYIKTTQVRTKSFEDPSCWYRHEFQEGWPFSSLDNGWIATDTTAEGLNVSVL 499 (765)
Q Consensus 420 ~WDTalai~AL~~ag~~~~~~~~l~kA~~~L~~~Q~~~~~~Gd~~~~~~~~~~GgW~fs~~~~~~pd~D~TA~aL~aL~~ 499 (765)
..|++..++||.-+. .+..++.+..+.+.|..+ |+....+.... +.+ ..+....-+|++.--+.|+..
T Consensus 359 ~RD~~qd~~~~~~~~-----p~~~r~~il~~~~~Q~~d---G~~~h~~~p~~--~~g--~~~~~~~~~D~~lW~i~av~~ 426 (811)
T 3qde_A 359 FRDSNQDLLGFVHQI-----PERARERLLDLAATQLED---GSAYHQYQPLT--KKG--NNEIGSNFNDDPLWLILATAA 426 (811)
T ss_dssp HHHHHHHHHTTTTTC-----HHHHHHHHHHHHTTBCTT---SCBCSEECTTT--CCE--ECTTCCCBTTHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHhcC-----HHHHHHHHHHHHhhcccC---CCccceecCCC--CCC--CCCCCCCcccchhHHHHHHHH
Confidence 478888888886442 346677788888899876 77654432111 111 111112357888777777754
Q ss_pred hcccc--ccccCCC-----------CChHHHHHHHHHHHhccccCC
Q 043885 500 LSEMS--YDLVGEA-----------IPLNRLFEAVNVVLSLQNSSG 532 (765)
Q Consensus 500 l~~~~--~~~~g~~-----------~~~~~l~~av~~Lls~Qn~dG 532 (765)
.-+.. .++..+. -.-+.+.++++|+++...++|
T Consensus 427 Y~~~TGD~~~L~e~~p~~~~~~~~~tl~eh~~ra~~~~~~~~g~~G 472 (811)
T 3qde_A 427 YIKETGDYSILKEQVPFNNDPSKADTMFEHLTRSFYHVVNNLGPHG 472 (811)
T ss_dssp HHHHHCCGGGGGSEEEETTEEEEEEEHHHHHHHHHHHHHTCBCTTS
T ss_pred HHHHHCCHHHHHhhhhhhcCCcccccHHHHHHHHHHHHHhcCCCCC
Confidence 31110 0011110 013689999999997666553
No 80
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=63.30 E-value=60 Score=35.23 Aligned_cols=93 Identities=15% Similarity=0.214 Sum_probs=59.5
Q ss_pred CcHHHHHHHHHhccCcCCccchhHHHHHHHHHHHHHHHhcCC-C-CCCCCCC----C---CCchhHHHHHHHHHHHc---
Q 043885 566 ECTSSTIQCLKSFTKHYPKHRRREIEEFIAKGANFIESIQRP-D-GWWYGSW----G---VCFTYGTWFGIKGLVDS--- 633 (765)
Q Consensus 566 d~Ta~~l~aL~~~~~~~p~~r~~~i~~~I~rAv~~L~~~Q~~-D-GsW~g~w----g---~~~~YgT~~al~aL~aa--- 633 (765)
-.+++.|.+++.... . ..++..+...++++||.+.... + |+|+-+. . ..+.|.-++++.+|+..
T Consensus 51 ~~nar~i~~~a~a~~-~---g~~~~l~~A~~~~~fl~~~~~D~~~GG~~~s~d~dg~~~~~k~lyd~Af~i~al~~~~~t 126 (421)
T 2zbl_A 51 WITARMLHVYSVAAS-M---GRPGAYDLVDHGIKAMNGALRDKKYGGWYACVNDQGVVDASKQGYQHFFALLGAASAVTT 126 (421)
T ss_dssp HHHHHHHHHHHHHHH-T---TCTTHHHHHHHHHHHHTTTTBCTTTSSBCSEEETTEEEECCEEHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHH-c---CChhHHHHHHHHHHHHHHhccCcCCCeEEEEeCCCCCcCCchhHHHHHHHHHHHHHHHHh
Confidence 457888887776542 1 1234567899999999876433 3 7786321 1 24678888888888753
Q ss_pred CCCCCChHHHHHHHHHHHhccc-C-CCccccc
Q 043885 634 GRKYENSRSIRKACDFLLSKQL-D-SGGWGES 663 (765)
Q Consensus 634 G~~~~~~~~i~rav~~Lls~Q~-~-DGGWGes 663 (765)
|.+ .....+++..+++.+.-. + +||+-++
T Consensus 127 g~~-~~l~~a~~~~~~l~~~~~d~~~Ggf~~~ 157 (421)
T 2zbl_A 127 GHP-EARKLLDYTIEVIEKYFWSEEEQMCLES 157 (421)
T ss_dssp TCT-THHHHHHHHHHHHHHHTEETTTTEECCE
T ss_pred CCc-cHHHHHHHHHHHHHHHhccCCCCCeeee
Confidence 333 234566777888887443 3 6887554
No 81
>3rrs_A Cellobiose phosphorylase; GH94, alpha barrel, disaccharide phosphorylase, transferase; 1.70A {Cellulomonas uda} PDB: 3rsy_A* 3s4a_A* 3s4b_A* 3s4c_A* 3s4d_A* 2cqs_A* 2cqt_A* 3qfy_A* 3qfz_A* 3qg0_A* 3act_A* 3acs_A* 3afj_A*
Probab=53.35 E-value=2.2e+02 Score=33.95 Aligned_cols=86 Identities=15% Similarity=0.127 Sum_probs=50.7
Q ss_pred ChHHHHHHHHHHHhccccCCCccccccCCCcchhhccccccccccccccCCccCcHHHHHHHHHhcc----------CcC
Q 043885 513 PLNRLFEAVNVVLSLQNSSGGVASYERTRSYAWMEMLNPVENFGESIIDYQYVECTSSTIQCLKSFT----------KHY 582 (765)
Q Consensus 513 ~~~~l~~av~~Lls~Qn~dGGw~~~e~~~~~~~le~l~p~e~f~~~~~d~~~~d~Ta~~l~aL~~~~----------~~~ 582 (765)
..+..++.+..+.+.|..||++..+-...+. .+..-+....+|.+...+.++..+- +..
T Consensus 380 ~pe~ar~~il~~~~~Q~~dG~v~h~~~p~~~-----------~g~~~~~~~~~D~~lWl~~av~~Yi~~TGD~~~L~e~~ 448 (822)
T 3rrs_A 380 IPERARERIIDIASTQFADGSAYHQYQPLTK-----------RGNNDIGSGFNDDPLWLIAGTAAYIKETGDFSILDEPV 448 (822)
T ss_dssp CHHHHHHHHHHHHTTCCTTSCCCSEEETTTT-----------EECTTTCSCBTTHHHHHHHHHHHHHHHHCCGGGGGSEE
T ss_pred CHHHHHHHHHHHHHhhcccCcccceecCcCC-----------CCccCCCCcccchHhHHHHHHHHHHHHHCCHHHHHhhh
Confidence 3578888899999999999998743221000 0111112345677777777776441 111
Q ss_pred Cccch----hHHHHHHHHHHHHHHHhcCCCC
Q 043885 583 PKHRR----REIEEFIAKGANFIESIQRPDG 609 (765)
Q Consensus 583 p~~r~----~~i~~~I~rAv~~L~~~Q~~DG 609 (765)
|-... ..+-+.+.||++|+.+...++|
T Consensus 449 p~~~~~~~~~tl~eh~~ra~~~~~~~~g~~G 479 (822)
T 3rrs_A 449 PFDNEPGSEVPLFEHLTRSFEFTVTHRGPHG 479 (822)
T ss_dssp CSTTCTTCCEEHHHHHHHHHHHHHHSBCTTS
T ss_pred hhhccccccccHHHHHHHHHHHHHhcCCCCC
Confidence 11100 1234579999999997666555
No 82
>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8
Probab=51.62 E-value=50 Score=36.95 Aligned_cols=86 Identities=13% Similarity=0.189 Sum_probs=50.8
Q ss_pred HHHcCCCCCChHHHHHHHHHHHhcccCCCccccccccccccccccCCCCCCcHHHHHHHHHHHHHhCCCCCCcHHHHHHH
Q 043885 630 LVDSGRKYENSRSIRKACDFLLSKQLDSGGWGESYVSCVDRVYTNLEGNKAHNVNTAWAMLALIEAGQAHRDPTPLHRAA 709 (765)
Q Consensus 630 L~aaG~~~~~~~~i~rav~~Lls~Q~~DGGWGes~~s~~~~~Y~~l~g~~S~~~~TAwALlAL~~aG~~~~d~~~i~rav 709 (765)
|-..|.-..+++.+++-.++++|..|+-.-=|.. . .++ |++-+.....|=|-.++.+ ....+.+.+.+.+
T Consensus 355 lPylG~~~~dDpiy~nTr~~IlS~~NPyy~~G~~-~-------~GI-GspH~~~~~~Wpmsll~~a-lts~d~~E~~~~L 424 (489)
T 2p0v_A 355 LPYLGDVKVTDPIYQNTRKFVWSEDNPYFFKGSA-G-------EGI-GGPHIGYDMIWPMSIMMKA-FTSQNDAEIKTCI 424 (489)
T ss_dssp HHHHTSSCTTCHHHHHHHHHHTSTTSTTEEECSS-C-------EEE-CCTTTCTTEECHHHHHHHH-HTCCCHHHHHHHH
T ss_pred HHHhCCCCCCCHHHHHHHHHHHhhcCCccccccc-c-------cCC-CCCCCCCCchHHHHHHHHH-HhcCCHHHHHHHH
Confidence 3344554346899999999999999853211111 0 000 1111222445555444443 1112455689999
Q ss_pred HHHHhcCcCCCCCCCC
Q 043885 710 RVLINSQMENGDFPQQ 725 (765)
Q Consensus 710 ~~L~~~Q~~dG~w~~~ 725 (765)
++|++.....|-.+|+
T Consensus 425 ~~l~~t~~gtGLmhEs 440 (489)
T 2p0v_A 425 KMLMDTDAGTGFMHES 440 (489)
T ss_dssp HHHHHTSTTSCSCCSE
T ss_pred HHHHhhCCCCCeeeee
Confidence 9999988888888875
No 83
>2hep_A UPF0291 protein YNZC; SR384, structure, autostructure, northeast structural genomics consortium, PSI-1, protein structure initiative, NESG; NMR {Bacillus subtilis} SCOP: a.2.21.1
Probab=50.03 E-value=8.8 Score=32.61 Aligned_cols=50 Identities=26% Similarity=0.354 Sum_probs=17.3
Q ss_pred CCHHHHHHHHHHHHHHhhcccCcCCchhHHHhhhhhhhcCCCCCCCCCcccccccccccccHHHHHHHH
Q 043885 34 GTPEEQAQVEKLRNDFTKNRFQMKHSSDLLMRLQFVKENPCDMKGQLPQVKVEENSEEEVNEEAVNTTL 102 (765)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~al 102 (765)
-|+||.++-.++|++|-++- + .+|.. .|-.|+|-|..+.+||++.+...-
T Consensus 22 LT~eEk~EQ~~LR~eYl~~f-R----------------~~~r~--~L~~ikivD~~G~dvtp~Klk~~q 71 (85)
T 2hep_A 22 ITEEEKAEQQKLRQEYLKGF-R----------------SSMKN--TLKSVKIIDPEGNDVTPEKLKREQ 71 (85)
T ss_dssp CCHHHHHHHHHHHHHHHHHC-C-----------------------------------------------
T ss_pred CCHHHHHHHHHHHHHHHHHH-H----------------HHHHH--HhcceeEECCCCCcCCHHHHHHHH
Confidence 49999999999999998742 1 23444 667777766568889998877653
No 84
>3ren_A Glycosyl hydrolase, family 8; (alpha/alpha)6-barrel fold, alpha-amylase; 2.00A {Clostridium perfringens}
Probab=48.53 E-value=2.8e+02 Score=29.59 Aligned_cols=264 Identities=14% Similarity=0.107 Sum_probs=130.9
Q ss_pred HHHHHHHHHHcCCCCcchHHHHHHHHHHHhhccccCCCCCCccccCCCCCCCCCCCCCCCCCCChhhhHHHHHHHHHhcc
Q 043885 423 TAFAVHAILSTNLVDEYGSMLKKANNYIKTTQVRTKSFEDPSCWYRHEFQEGWPFSSLDNGWIATDTTAEGLNVSVLLSE 502 (765)
Q Consensus 423 Talai~AL~~ag~~~~~~~~l~kA~~~L~~~Q~~~~~~Gd~~~~~~~~~~GgW~fs~~~~~~pd~D~TA~aL~aL~~l~~ 502 (765)
-++.++.++.+| + ....++-.+|.++.-. ++.-=.|+ -.+.+.+ . ..-+|.-=....||+.+++
T Consensus 65 qGygMl~av~~~---d-~~~Fd~l~~~t~~~l~-~~~L~sWr----~~~~~~~----~---nNAtdgDl~IA~ALl~A~~ 128 (350)
T 3ren_A 65 EGLMMLYSVNAN---N-KELFDEHFDIVKEMRL-KNGLISWR----KEGDENS----P---SSATIDELRIIKALLLANN 128 (350)
T ss_dssp HHHHHHHHHHTT---C-HHHHHHHHHHHHTTBC-TTSSBCSE----EETTEEC----S---CEEHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcC---C-HHHHHHHHHHHHHHhc-cCCceEEE----ECCCCCC----C---CCCcHHHHHHHHHHHHHHH
Confidence 344455445555 2 6889999999998766 32111122 1111222 1 1235666677788887764
Q ss_pred ccccccCCCCChHHHHHHHHHHHhccccCCC---ccccccCCCcchhhccccccccccccccCCccCcHHHHHHHHHhcc
Q 043885 503 MSYDLVGEAIPLNRLFEAVNVVLSLQNSSGG---VASYERTRSYAWMEMLNPVENFGESIIDYQYVECTSSTIQCLKSFT 579 (765)
Q Consensus 503 ~~~~~~g~~~~~~~l~~av~~Lls~Qn~dGG---w~~~e~~~~~~~le~l~p~e~f~~~~~d~~~~d~Ta~~l~aL~~~~ 579 (765)
.- +.+.......+-.+=|+...-.+|. |..++.. -. ++.++|.... ++..|..+.
T Consensus 129 ~W----~~~~Y~~~A~~I~~~i~~~~~~~g~l~~~~d~~~~-----~~-----------~ln~SY~~~~--a~~~f~~~~ 186 (350)
T 3ren_A 129 RW----NSFYYKFYAINIANSLLKHAEENETLVDYIDNYGK-----GN-----------TTTLCYLDLP--TMKLLSQVD 186 (350)
T ss_dssp HH----CCHHHHHHHHHHHHHHHHHHEETTEECSEECSSCB-----CS-----------EEEGGGCCHH--HHHHHHHHC
T ss_pred Hc----CcHHHHHHHHHHHHHHHHHccccCcccCCCCccCC-----CC-----------EeehHhcCHH--HHHHHHHhc
Confidence 32 2222222222223333333222432 2222111 11 2234444322 233333321
Q ss_pred CcCCccchhHHHHHHHHHHHHHHHhcCCCC-CCCCC-C--C-CCchh-------HHHHHHHHHHHcCCCCCChHHHHHHH
Q 043885 580 KHYPKHRRREIEEFIAKGANFIESIQRPDG-WWYGS-W--G-VCFTY-------GTWFGIKGLVDSGRKYENSRSIRKAC 647 (765)
Q Consensus 580 ~~~p~~r~~~i~~~I~rAv~~L~~~Q~~DG-sW~g~-w--g-~~~~Y-------gT~~al~aL~aaG~~~~~~~~i~rav 647 (765)
+ .-++.++++++.|.+...+|+ ..+.. + . ..|.| -...+..-|...|... + ...
T Consensus 187 ---~-----~W~~l~~~g~~lL~~g~p~D~~~l~~~~~~~~~~~y~yd~~vn~iDalrv~L~La~~g~~~---~---~~~ 252 (350)
T 3ren_A 187 ---K-----KWEGIYEKSNSIIENGKISEEVPLYRKVFYEETQKYDEEENVDFLLSTIVILNRIEAGENE---E---SSI 252 (350)
T ss_dssp ---T-----HHHHHHHHHHHHHHTTBCCSSSCCBCSEEETTTTEECCCSEEEHHHHHHHHHHHHHTTCCC---H---HHH
T ss_pred ---c-----hHHHHHHHHHHHHHhCCCCcccccCCcccccCCCCcccccccchHHHHHHHHHHHhcCCCc---H---HHH
Confidence 1 235788999999998666663 22221 1 1 23555 2344444566677662 2 237
Q ss_pred HHHHhcccCCC---ccccccccccccccccCCCCCC--cHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHhcCcCCCCC
Q 043885 648 DFLLSKQLDSG---GWGESYVSCVDRVYTNLEGNKA--HNVNTAWAMLALIEAGQAHRDPTPLHRAARVLINSQMENGDF 722 (765)
Q Consensus 648 ~~Lls~Q~~DG---GWGes~~s~~~~~Y~~l~g~~S--~~~~TAwALlAL~~aG~~~~d~~~i~rav~~L~~~Q~~dG~w 722 (765)
+||...-..+| +|-.- . .|.++ ..+.-.+||.+|+..... |.+-.+.+++-|.+.|..|+..
T Consensus 253 ~fl~~~~~~~g~l~~~y~~-~----------tg~~~~~~eS~g~yAiaal~~~~~~--D~~la~~~~~rm~~fq~~d~~s 319 (350)
T 3ren_A 253 KWIKEKFKKDGFLVATYNG-K----------NGDATSQIESPSIYSNVALIANYIG--DKELFNKAIDKLKYYQIKNKDS 319 (350)
T ss_dssp HHHHHHHHHHSSCCSEEET-T----------TCCBCCCCCCHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHSCCCTTS
T ss_pred HHHHHHHhhcCCcceEEEC-C----------CCCcCCCCCCHHHHHHHHHHHHHcC--CHHHHHHHHHHHHhcccCCCCc
Confidence 77773211134 33110 0 01111 112234556555554332 4567888999999999999765
Q ss_pred CCCccccccCCccccccCCccchHHHHHHHHH
Q 043885 723 PQQEIMGSFTRNCMISYSAWRNIFPIWALGAF 754 (765)
Q Consensus 723 ~~~~~~g~f~~~~~~~Y~~Yr~~fpl~ALg~y 754 (765)
+-- |.|-..---+-++|-|+.||.|.-.|
T Consensus 320 ~yy---GG~~~~~~~~~~sfdNL~~LlA~~~~ 348 (350)
T 3ren_A 320 VLY---GGFGDEKTNSVYSFDNLNALLAFQKY 348 (350)
T ss_dssp TTT---TSCSBTTTTBCBHHHHHHHHHHHHTC
T ss_pred ccC---CcccccCCCceeeeccHHHHHHHHhh
Confidence 432 33332111124578999999998776
No 85
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=45.19 E-value=2.3e+02 Score=29.89 Aligned_cols=163 Identities=17% Similarity=0.098 Sum_probs=87.5
Q ss_pred hhHHHHHHHHHHHcCC---CCcchHHHHHHHHHHHhhccccCCCCCCccccCCCCCCCCCCCCCCCCCCChhhhHHHHHH
Q 043885 420 LWDTAFAVHAILSTNL---VDEYGSMLKKANNYIKTTQVRTKSFEDPSCWYRHEFQEGWPFSSLDNGWIATDTTAEGLNV 496 (765)
Q Consensus 420 ~WDTalai~AL~~ag~---~~~~~~~l~kA~~~L~~~Q~~~~~~Gd~~~~~~~~~~GgW~fs~~~~~~pd~D~TA~aL~a 496 (765)
-|=++.++.+|.++.. .+++...++++.+++.... ++ .|+ + . -.||-+....+
T Consensus 45 yWW~a~~~~~l~d~~~~tgd~~y~~~a~~~~~~~~~~~------~~-----------~~~----~-~--~~DD~a~~~la 100 (349)
T 3k7x_A 45 YWWLAHLVEVRLDAYLRTKKQADLEVAEKTYLHNKNRN------GG-----------TLI----H-D--FYDDMLWNALA 100 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHT------TS-----------SSC----C-S--BHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcC------CC-----------CCC----c-c--CccHHHHHHHH
Confidence 3446666788877522 2345677777877776631 11 111 1 1 25888887677
Q ss_pred HHHhccccccccCCCCChHHHHHHHHHH-Hhcccc--CCCccccccCCCcchhhccccccccccccccCCccCcHHHHHH
Q 043885 497 SVLLSEMSYDLVGEAIPLNRLFEAVNVV-LSLQNS--SGGVASYERTRSYAWMEMLNPVENFGESIIDYQYVECTSSTIQ 573 (765)
Q Consensus 497 L~~l~~~~~~~~g~~~~~~~l~~av~~L-ls~Qn~--dGGw~~~e~~~~~~~le~l~p~e~f~~~~~d~~~~d~Ta~~l~ 573 (765)
++.+-+. .|++..-+...+..+++ .+.-++ .||+ .|.... +.+. .+-+.+..+.
T Consensus 101 ~~~aye~----t~~~~yL~~A~~l~~~l~~~~wd~~~gGGi-~W~~~~-----------~~~k-------naisN~~~~~ 157 (349)
T 3k7x_A 101 AYRLYKA----TGKSIYLEDAQLVWQDLVDTGWNDIMGGGF-AWRRPQ-----------MYYK-------NTPVNAPFII 157 (349)
T ss_dssp HHHHHHH----HCCHHHHHHHHHHHHHHHHHTBCSGGGSCB-EEETTE-----------EEEE-------EHHHHHHHHH
T ss_pred HHHHHHH----HCCchHHHHHHHHHHHHHHhCCCCCCCCce-EecCCC-----------cccc-------chhhHHHHHH
Confidence 7766543 23333334444455666 443333 4666 344321 0111 1113555555
Q ss_pred HHHhccCcCCccchhHHHHHHHHHHHHHHHh-cCCCCCCCCC----C-C-----CCchhHHHHHHHHHHH
Q 043885 574 CLKSFTKHYPKHRRREIEEFIAKGANFIESI-QRPDGWWYGS----W-G-----VCFTYGTWFGIKGLVD 632 (765)
Q Consensus 574 aL~~~~~~~p~~r~~~i~~~I~rAv~~L~~~-Q~~DGsW~g~----w-g-----~~~~YgT~~al~aL~a 632 (765)
+++.+.+... .++..+..++..+|+.+. .+++|..+.. . + ..++|+.+++|.|++.
T Consensus 158 ~la~l~~~tg---d~~Yl~~A~~~~~w~~~~l~d~~g~v~Dg~~~~~~g~~~~~~~~tYnqg~~l~g~~~ 224 (349)
T 3k7x_A 158 LSCWLYNELN---ETKYLEWAMKTYEWQTKVLVREDGFVEDGINRLEDGTIDYEWKFTYNQGVYIGANLE 224 (349)
T ss_dssp HHHHHHHHHC---CHHHHHHHHHHHHHHHHHHBCTTSCBCCEECTTSSSCBCTTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhC---CHHHHHHHHHHHHHHHhcCCCCCCeEecCCccCCCCccCCcCeeeHHHHHHHHHHHH
Confidence 5554432211 234567788889998764 4566655421 1 1 2589999999999874
No 86
>1gai_A Glucoamylase-471; hydrolase, glycosidase, polysaccharide degradation, glycoPro; HET: MAN NAG BMA GAC; 1.70A {Aspergillus awamori} SCOP: a.102.1.1 PDB: 1gah_A* 3gly_A* 1dog_A* 1glm_A* 1agm_A* 3eqa_A*
Probab=41.68 E-value=63 Score=36.07 Aligned_cols=42 Identities=10% Similarity=0.207 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHhcCC-C-CCCCCCCCCCchhHHHHHHHHHHH
Q 043885 590 IEEFIAKGANFIESIQRP-D-GWWYGSWGVCFTYGTWFGIKGLVD 632 (765)
Q Consensus 590 i~~~I~rAv~~L~~~Q~~-D-GsW~g~wg~~~~YgT~~al~aL~a 632 (765)
+-+.|+++++||.+.-+. | |-|..+-| .++|..+.+..||.+
T Consensus 154 ~w~~i~~~l~~v~~~w~~pd~dlWEer~g-~~~~T~~~~~~AL~~ 197 (472)
T 1gai_A 154 VWPLVRNDLSYVAQYWNQTGYDLWEEVNG-SSFFTIAVQHRALVE 197 (472)
T ss_dssp HHHHHHHHHHHHHHHTTSCEECTTSCCEE-EEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCCcccCC-CCHHHHHHHHHHHHH
Confidence 456799999999886553 3 66765544 478888777778763
No 87
>1wgn_A UBAP1, ubiquitin associated protein; ubiquitin associated protein 1 (UBAP1), UBA domain, structural genomics; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=34.80 E-value=34 Score=27.27 Aligned_cols=29 Identities=17% Similarity=0.299 Sum_probs=22.1
Q ss_pred HHHHHHHHHcCCCCCChHHHHHHHHHHHhcccCCC
Q 043885 624 WFGIKGLVDSGRKYENSRSIRKACDFLLSKQLDSG 658 (765)
Q Consensus 624 ~~al~aL~aaG~~~~~~~~i~rav~~Lls~Q~~DG 658 (765)
-.|..||.+.|-. |.||++||.++..+.-
T Consensus 34 ~qA~kALKat~~N------vErAaDWLFSH~D~~~ 62 (63)
T 1wgn_A 34 ECVLRAMKKKGEN------IEQILDYLFAHSGPSS 62 (63)
T ss_dssp HHHHHHHHHHCSC------HHHHHHHHHHHSCCCC
T ss_pred HHHHHHHHHcCCC------HHHHHHHHHhCCCCCC
Confidence 3577888887643 6799999999877654
No 88
>2dna_A Unnamed protein product; ubiquitin associated domain, DSK2 protein, proteasome, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.5.2.1
Probab=31.24 E-value=44 Score=27.08 Aligned_cols=28 Identities=25% Similarity=0.146 Sum_probs=21.4
Q ss_pred HHHHHHHHcCCCCCChHHHHHHHHHHHhcccCCC
Q 043885 625 FGIKGLVDSGRKYENSRSIRKACDFLLSKQLDSG 658 (765)
Q Consensus 625 ~al~aL~aaG~~~~~~~~i~rav~~Lls~Q~~DG 658 (765)
..++||.+.+-+ |.+||+||++.+..+|
T Consensus 36 an~~AL~at~Gn------ve~Ave~L~~~~~~~~ 63 (67)
T 2dna_A 36 ANLQALIATDGD------TNAAIYKLKSSQGFSG 63 (67)
T ss_dssp HHHHHHHHTTSC------HHHHHHHHHHCCSSSC
T ss_pred HHHHHHHHcCCC------HHHHHHHHHhCCCccC
Confidence 457788877533 6799999999987665
No 89
>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A*
Probab=30.28 E-value=99 Score=36.56 Aligned_cols=250 Identities=10% Similarity=0.026 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHhccccccccCCCCChHHHHHHHHHHHhccccCCC-ccccccCCCcchhhccccccc------ccc----
Q 043885 489 TTAEGLNVSVLLSEMSYDLVGEAIPLNRLFEAVNVVLSLQNSSGG-VASYERTRSYAWMEMLNPVEN------FGE---- 557 (765)
Q Consensus 489 ~TA~aL~aL~~l~~~~~~~~g~~~~~~~l~~av~~Lls~Qn~dGG-w~~~e~~~~~~~le~l~p~e~------f~~---- 557 (765)
||...+.+|+.. ..+..++.+.++.+.|.+||+ +..+-++....--..++|... .++
T Consensus 350 D~~~~~~~l~~~------------~p~~ar~~l~~~~~~Q~~~G~~~p~~~p~~~~~~~g~~~~~~~~~~~g~~~~~~~~ 417 (807)
T 1v7w_A 350 DTAQDAISVPHA------------NPEMTRKRIVDLLRGQVKAGYGLHLFDPDWFDPEKEDVAPSKSPTVVPTPSDEDKI 417 (807)
T ss_dssp HHHHHTTSCTTT------------CHHHHHHHHHHHHHTBCTTSCBCSEECGGGGCC----------------------C
T ss_pred HHhHHHHHHhhc------------CHHHHHHHHHHHHhccccCCCcceeeeeccccccccccCCccccccccCCCcchhh
Q ss_pred ccccCCccCcHHHHHHHHHhccCcCCccc-hhHHHHH-----------HHHHHHHHHHhcCCCCCCC---CCCC------
Q 043885 558 SIIDYQYVECTSSTIQCLKSFTKHYPKHR-RREIEEF-----------IAKGANFIESIQRPDGWWY---GSWG------ 616 (765)
Q Consensus 558 ~~~d~~~~d~Ta~~l~aL~~~~~~~p~~r-~~~i~~~-----------I~rAv~~L~~~Q~~DGsW~---g~wg------ 616 (765)
..+...+.|.+...+.++..+-+...+.. -++.-+. ++++++|+.+...++|-.. ++|.
T Consensus 418 ~g~~~~~~D~~lw~~~~~~~y~~~tGD~~~L~e~~p~~~~~~~~v~e~~~~~~~~~~~~~~~~GL~~~~~~DW~D~~~~~ 497 (807)
T 1v7w_A 418 HGIKDTCSDDHLWLIPTICKYVMETGETSFFDQMIPYADGGEASVYEHMKAALDFSAEYVGQTGICKGLRADWNDCLNLG 497 (807)
T ss_dssp CCGGGCBSSGGGGHHHHHHHHHHHHCCGGGGGCEEECTTSCEEEHHHHHHHHHHHHHHSBCTTSCBEEETCSSSTTCCCE
T ss_pred cCCCCCccchhhHHHHHHHHHHHHhCCHHHHhcccccccCCcchHHHHHHHHHHHHHhcCCCCCCcccCCCCCCCcCCCC
Q ss_pred -------CCchhHHHHHHHHHHHcCCCCCChHHHHHHHHHHHhccc-----CCCccccccccccccccccCCCCCCcHHH
Q 043885 617 -------VCFTYGTWFGIKGLVDSGRKYENSRSIRKACDFLLSKQL-----DSGGWGESYVSCVDRVYTNLEGNKAHNVN 684 (765)
Q Consensus 617 -------~~~~YgT~~al~aL~aaG~~~~~~~~i~rav~~Lls~Q~-----~DGGWGes~~s~~~~~Y~~l~g~~S~~~~ 684 (765)
..+.|.....+.-|+..--........++..+-|++.=+ ++|+|-.......................
T Consensus 498 ~g~~v~~~a~~y~al~~~a~la~~lG~~~~a~~~~~~A~~lk~~~~~~~w~~~~~~f~~~~~~d~~~~g~~~~~~~~~~~ 577 (807)
T 1v7w_A 498 GGESSMVSFLHFWALQEFIDLAKFLGKDQDVNTYTEMAANVREACETHLWDDEGGWYIRGLTKNGDKIGTAQQQEGRVHL 577 (807)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHSEETTTTEECCEECTTSCEESCTTCSSCCEEH
T ss_pred CCeehhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhccCCCCCeeeeeeccCCCCcCCccCCCCcCcc
Q ss_pred HHHHHHHHHHhCCCCCCcHHHHHHHHHHHhcCcCCCCC-----------CCCccccccCCccccccCCccc--hHHHHHH
Q 043885 685 TAWAMLALIEAGQAHRDPTPLHRAARVLINSQMENGDF-----------PQQEIMGSFTRNCMISYSAWRN--IFPIWAL 751 (765)
Q Consensus 685 TAwALlAL~~aG~~~~d~~~i~rav~~L~~~Q~~dG~w-----------~~~~~~g~f~~~~~~~Y~~Yr~--~fpl~AL 751 (765)
++. ..+|+ +|.. +++..+++++.+.+.-..+.+. ++...+..|+...+=+=..|.+ .|.+.||
T Consensus 578 ~~~-~~al~-~g~~--~~e~a~~~l~~v~~~L~~~~G~~~~~p~~~~~~~~~g~~~~y~~~~~enG~~~~~~~~w~~~al 653 (807)
T 1v7w_A 578 ESN-TLAVL-SGLA--SQERGEQAMDAVDEHLFSPYGLHLNAPSFSTPNDDIGFVTRVYQGVKENGAIFSHPNPWAWVAE 653 (807)
T ss_dssp HHH-HHHHH-TTCS--CHHHHHHHHHHHHHHHEETTEECSEESCCCSCCTTTCGGGGSCTTBTTBTSEESTTHHHHHHHH
T ss_pred cch-HHHHh-hCCC--CHHHHHHHHHHHHHhcCCCCceeecCCcccccCcCCceeeccCCccccccccccchHHHHHHHH
Q ss_pred HHH
Q 043885 752 GAF 754 (765)
Q Consensus 752 g~y 754 (765)
.++
T Consensus 654 ~~~ 656 (807)
T 1v7w_A 654 TKL 656 (807)
T ss_dssp HHT
T ss_pred HHc
No 90
>3eu8_A Putative glucoamylase; YP_210071.1, structural genomics, JOI for structural genomics, JCSG; 2.12A {Bacteroides fragilis nctc 9343}
Probab=29.88 E-value=2.1e+02 Score=31.38 Aligned_cols=77 Identities=21% Similarity=0.234 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHc---CCCC--cchHHHHHHHHHHHhhccccCCCCCCccccCCCCCCCCCCCCCCCCCCChhhhHHHHHH
Q 043885 422 DTAFAVHAILST---NLVD--EYGSMLKKANNYIKTTQVRTKSFEDPSCWYRHEFQEGWPFSSLDNGWIATDTTAEGLNV 496 (765)
Q Consensus 422 DTalai~AL~~a---g~~~--~~~~~l~kA~~~L~~~Q~~~~~~Gd~~~~~~~~~~GgW~fs~~~~~~pd~D~TA~aL~a 496 (765)
.++|.++|++.+ |... +.-+.+++.+++|.+.+.- .|-|-.++-..+.--=+|+..|++-..+| ||.-+.+
T Consensus 66 niGfgL~A~~vA~e~G~I~r~ea~~R~~~tL~~l~~~~r~---~G~fyhwyD~~Tg~~lpf~~~d~~~StVD-Ta~L~~G 141 (430)
T 3eu8_A 66 GSGFGIMAILAGIDRGYVSREEGLRRMEKIVGFLEKADRF---KGAYPHWWNGETGHVQPFGQKDNGGDLVE-TAFLMQG 141 (430)
T ss_dssp HHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHSCCB---TTBCCSEEETTTCCBCCBTTTBCSEEHHH-HHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHhchhc---CCcCccccCCCCCCcCCCCcccCcccHHH-HHHHHHH
Confidence 588988888765 6653 3456788899999876543 26665555222222235655555556666 9998888
Q ss_pred HHHhcc
Q 043885 497 SVLLSE 502 (765)
Q Consensus 497 L~~l~~ 502 (765)
|+.+++
T Consensus 142 lL~ar~ 147 (430)
T 3eu8_A 142 LLAVHQ 147 (430)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887753
No 91
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=29.09 E-value=75 Score=34.50 Aligned_cols=49 Identities=14% Similarity=0.229 Sum_probs=34.7
Q ss_pred ccHHHHHHHHHHHHHHHHhcCCCCCCccccC--CCCCc-----chHHHHHHHHHhc
Q 043885 93 VNEEAVNTTLRRALRFYSTLQSEDGFWPGDY--AGPLF-----LLPCLVIGLYITG 141 (765)
Q Consensus 93 ~~~e~~~~al~~a~~~l~~~Q~~DG~W~~~~--~g~~~-----~~~~~vial~~~g 141 (765)
+..+...+.++++++++.+.|.++|.|+... +.+.. -+|+.++++....
T Consensus 247 ~~~~~~~~~i~~~l~~l~~~~~~~g~wp~~~~~~~~~~~~wChG~~Gi~~~l~~~~ 302 (411)
T 3e6u_A 247 VSQGKLHSLVKPSVDYVCQLKFPSGNYPPCIGDNRDLLVHWCHGAPGVIYMLIQAY 302 (411)
T ss_dssp CCHHHHHHTHHHHHHHHHHTCCTTSCCCSBTTCCCCCCCSSSSSHHHHHHHHHHHH
T ss_pred cChHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccCccccccCCcHHHHHHHHHHH
Confidence 3456788899999999999999999998522 22211 1677777765554
No 92
>1rwh_A Chondroitin AC lyase; chondroitinase, chondroitin lyase; HET: ASG GCT GAD; 1.25A {Arthrobacter aurescens} SCOP: a.102.3.2 b.24.1.1 b.30.5.2 PDB: 1rwc_A* 1rwf_A* 1rwg_A* 1rwa_A* 1rw9_A
Probab=28.39 E-value=4.3e+02 Score=31.09 Aligned_cols=21 Identities=10% Similarity=0.031 Sum_probs=16.7
Q ss_pred cchhHHHHHHHHHHHHHHHhc
Q 043885 585 HRRREIEEFIAKGANFIESIQ 605 (765)
Q Consensus 585 ~r~~~i~~~I~rAv~~L~~~Q 605 (765)
+..+++...|.+|++|+.+..
T Consensus 94 y~~~~l~~~i~~al~~~~~~~ 114 (757)
T 1rwh_A 94 FGDAAVLAAIKAGLADANTLC 114 (757)
T ss_dssp TTCHHHHHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHHHHhcc
Confidence 455678889999999998643
No 93
>2dna_A Unnamed protein product; ubiquitin associated domain, DSK2 protein, proteasome, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.5.2.1
Probab=27.35 E-value=61 Score=26.23 Aligned_cols=28 Identities=29% Similarity=0.144 Sum_probs=21.4
Q ss_pred HHHHHHHHhCCCCCCcHHHHHHHHHHHhcCcCCC
Q 043885 687 WAMLALIEAGQAHRDPTPLHRAARVLINSQMENG 720 (765)
Q Consensus 687 wALlAL~~aG~~~~d~~~i~rav~~L~~~Q~~dG 720 (765)
..+.||.+++- .+++||+||.+.+.+.|
T Consensus 36 an~~AL~at~G------nve~Ave~L~~~~~~~~ 63 (67)
T 2dna_A 36 ANLQALIATDG------DTNAAIYKLKSSQGFSG 63 (67)
T ss_dssp HHHHHHHHTTS------CHHHHHHHHHHCCSSSC
T ss_pred HHHHHHHHcCC------CHHHHHHHHHhCCCccC
Confidence 34677777752 28999999999887766
No 94
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=27.23 E-value=6.3e+02 Score=27.41 Aligned_cols=21 Identities=10% Similarity=0.023 Sum_probs=16.6
Q ss_pred hHHHHHHHHHHHhccccCCCc
Q 043885 514 LNRLFEAVNVVLSLQNSSGGV 534 (765)
Q Consensus 514 ~~~l~~av~~Lls~Qn~dGGw 534 (765)
.+.++=+++||++||.++|++
T Consensus 93 ldeikwg~D~llk~~~~~g~~ 113 (433)
T 1ks8_A 93 RKAVKWATDYFIKAHTSQNEF 113 (433)
T ss_dssp HHHHHHHHHHHHHHCCBTTBE
T ss_pred HHHHHHHHHHHHHhccCCCcE
Confidence 355666788999999998865
No 95
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=26.06 E-value=6.3e+02 Score=27.01 Aligned_cols=46 Identities=7% Similarity=0.158 Sum_probs=32.7
Q ss_pred cCcHHHHHHHHHhccCcCCccchhHHHHHHHHHHHHHHHhcCCCCCCCC
Q 043885 565 VECTSSTIQCLKSFTKHYPKHRRREIEEFIAKGANFIESIQRPDGWWYG 613 (765)
Q Consensus 565 ~d~Ta~~l~aL~~~~~~~p~~r~~~i~~~I~rAv~~L~~~Q~~DGsW~g 613 (765)
++.++-++.+|..+.+. ...+++.+.|+++++|+.+.+.++|.|..
T Consensus 230 aHG~aGI~~~Ll~~~~~---~~~~~~~~~i~~~l~~l~~~~~~~g~wp~ 275 (411)
T 3e6u_A 230 AHGLAGIYYYLMQPSLQ---VSQGKLHSLVKPSVDYVCQLKFPSGNYPP 275 (411)
T ss_dssp TTSHHHHHHHHTCGGGC---CCHHHHHHTHHHHHHHHHHTCCTTSCCCS
T ss_pred cccHHHHHHHHHHHHhh---cChHHHHHHHHHHHHHHHHhhccCCCCCC
Confidence 45566666666655332 22345678899999999999999998864
No 96
>1cb8_A Protein (chondroitinase AC); lyase, chondroitin degradation; HET: MAN RAM GCU MFU; 1.90A {Pedobacter heparinus} SCOP: a.102.3.2 b.24.1.1 b.30.5.2 PDB: 1hm2_A* 1hm3_A* 1hmu_A* 1hmw_A*
Probab=24.96 E-value=3.9e+02 Score=31.02 Aligned_cols=27 Identities=11% Similarity=0.160 Sum_probs=20.8
Q ss_pred cchhHHHHHHHHHHHHHHHhcCCCCCC
Q 043885 585 HRRREIEEFIAKGANFIESIQRPDGWW 611 (765)
Q Consensus 585 ~r~~~i~~~I~rAv~~L~~~Q~~DGsW 611 (765)
+..+++...|.+|++|..+.....|-|
T Consensus 78 y~~~~l~~~I~~al~~~~~~~~~~~NW 104 (678)
T 1cb8_A 78 YGDDKVFDQISKAFKYWYDSDPKSRNW 104 (678)
T ss_dssp TTCHHHHHHHHHHHHHHHHHCCCCSSH
T ss_pred cCCHHHHHHHHHHHHHHHhCCCCCCCc
Confidence 455678889999999987776666666
No 97
>1wgn_A UBAP1, ubiquitin associated protein; ubiquitin associated protein 1 (UBAP1), UBA domain, structural genomics; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=24.86 E-value=73 Score=25.37 Aligned_cols=27 Identities=11% Similarity=0.173 Sum_probs=21.1
Q ss_pred HHHHHHHHhCCCCCCcHHHHHHHHHHHhcCcCC
Q 043885 687 WAMLALIEAGQAHRDPTPLHRAARVLINSQMEN 719 (765)
Q Consensus 687 wALlAL~~aG~~~~d~~~i~rav~~L~~~Q~~d 719 (765)
.|..||.+.+. .++||++||-++..+.
T Consensus 35 qA~kALKat~~------NvErAaDWLFSH~D~~ 61 (63)
T 1wgn_A 35 CVLRAMKKKGE------NIEQILDYLFAHSGPS 61 (63)
T ss_dssp HHHHHHHHHCS------CHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHcCC------CHHHHHHHHHhCCCCC
Confidence 47788888764 2899999999987654
No 98
>3ff5_A PEX14P, peroxisomal biogenesis factor 14; protein import, peroxin, 3 helices bundle, protein transport; HET: DPW; 1.80A {Rattus norvegicus}
Probab=24.84 E-value=1.6e+02 Score=22.76 Aligned_cols=41 Identities=27% Similarity=0.340 Sum_probs=28.5
Q ss_pred CCCHHHHHHHHHHHHHHhhcccCcCCchhHHHhhhhhhhcCCC
Q 043885 33 LGTPEEQAQVEKLRNDFTKNRFQMKHSSDLLMRLQFVKENPCD 75 (765)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~q~~~~~~~~ 75 (765)
.|++..|++.-+....|-+|--. + ++-+--+.+|++.+++.
T Consensus 3 ~~~~~~Re~li~~Av~FL~dp~V-~-~sp~~~K~~FL~sKGLt 43 (54)
T 3ff5_A 3 LGSPEFREPLIATAVKFLQNSRV-R-QSPLATRRAFLKKKGLT 43 (54)
T ss_dssp TCCHHHHHHHHHHHHHHHHCTTG-G-GSCHHHHHHHHHHTTCC
T ss_pred CCCCccHHHHHHHHHHHhCChhh-h-cCCHHHHHHHHHHcCCC
Confidence 47788887655555568776542 3 34477899999999874
No 99
>2wco_A Putative secreted lyase; family 8, glycosaminoglycans (GAGS) hydrolysis; HET: GC4 NAG; 1.94A {Streptomyces coelicolor A3} PDB: 2wda_A* 2x03_A
Probab=23.91 E-value=2.1e+02 Score=33.75 Aligned_cols=20 Identities=10% Similarity=0.160 Sum_probs=16.4
Q ss_pred cchhHHHHHHHHHHHHHHHh
Q 043885 585 HRRREIEEFIAKGANFIESI 604 (765)
Q Consensus 585 ~r~~~i~~~I~rAv~~L~~~ 604 (765)
+..+++...|.+|++|+.+.
T Consensus 109 y~n~~l~~~I~~aL~~~~~~ 128 (765)
T 2wco_A 109 TGDPALLADILRGLDHLSAT 128 (765)
T ss_dssp TTCHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHh
Confidence 45667888999999999865
No 100
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=23.63 E-value=4.6e+02 Score=29.94 Aligned_cols=146 Identities=19% Similarity=0.267 Sum_probs=81.2
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCCCCC----CCCCC-----------------------chhHHHHHHHHHHHcCCC----
Q 043885 588 REIEEFIAKGANFIESIQRPDGWWYG----SWGVC-----------------------FTYGTWFGIKGLVDSGRK---- 636 (765)
Q Consensus 588 ~~i~~~I~rAv~~L~~~Q~~DGsW~g----~wg~~-----------------------~~YgT~~al~aL~aaG~~---- 636 (765)
..+.+.++=+++||+++|.++|..|. .|+.. +.-++...+.||+++..-
T Consensus 190 ~~lldE~rWg~D~llkm~~~~g~~y~qVgd~W~~d~~~R~~~~~~~~~~~~~~~y~~~~~~~agl~aAALA~Asrvf~d~ 269 (586)
T 3h7l_A 190 TRLIEEALFGADFLVRMQNEKGFFYMTVFDKWSKDTAQREICAYETQLGHKFDDYQAGFRQGGGVAIAALAAASRLGVHG 269 (586)
T ss_dssp HHHHHHHHHHHHHHHHTBCTTSCBBCEEECTTCCCGGGCEEEEEETTTTEEESCCBCCGGGTHHHHHHHHHHHTTSSSCS
T ss_pred HHHHHHHHHHHHHHHhcccCCCeEEEEecCCCCCCCCccccccccCCCCCCCcceecCCCCcHHHHHHHHHHHhcccCCC
Confidence 35667788899999999999998763 35420 011344566777776654
Q ss_pred -CCCh---HHHHHHHHHHHhccc---CCCccccccccccccccccCCCCCCcHHHHHHHHHHHHHhCCCCCCcHHHHHHH
Q 043885 637 -YENS---RSIRKACDFLLSKQL---DSGGWGESYVSCVDRVYTNLEGNKAHNVNTAWAMLALIEAGQAHRDPTPLHRAA 709 (765)
Q Consensus 637 -~~~~---~~i~rav~~Lls~Q~---~DGGWGes~~s~~~~~Y~~l~g~~S~~~~TAwALlAL~~aG~~~~d~~~i~rav 709 (765)
+... .+.+++.+|+.++.. .+|. ..| .+-..-.||.+-|..+.. ++.=++.+.
T Consensus 270 ~~~a~~~L~aA~~a~~fa~~~~~~y~~~g~----------~~~-------~De~~~~WAA~eLy~ATg---d~~YL~~a~ 329 (586)
T 3h7l_A 270 EYDQQKYRNAAENGYWHLKEHNTQYLNDGE----------ENI-------IDEYCALLASVELFKATK---ETRYLEESR 329 (586)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHSTTSC----------CCH-------HHHHHHHHHHHHHHHHHC---CHHHHHHHH
T ss_pred CcChHHHHHHHHHHHHHHHhcCccccCCCC----------ccc-------hhHHHHHHHHHHHHHHhC---CHHHHHHHH
Confidence 3112 345567788887632 1110 011 111223688888887653 233344443
Q ss_pred ---HHHHhcCcCC--CC--CCCCccccccCCccccccCCccchHHHHHHHHHHHhcc
Q 043885 710 ---RVLINSQMEN--GD--FPQQEIMGSFTRNCMISYSAWRNIFPIWALGAFYNRVL 759 (765)
Q Consensus 710 ---~~L~~~Q~~d--G~--w~~~~~~g~f~~~~~~~Y~~Yr~~fpl~ALg~y~~~~~ 759 (765)
+.|..++..+ |+ |....- -++.+ |+.=.+..|+.||.+|.+...
T Consensus 330 ~~a~~l~~~~~~~~~~g~~w~~~d~---~~r~~---~d~a~~gl~~iaLl~l~~~~~ 380 (586)
T 3h7l_A 330 LWAQRLVARQMSDEQIQHFWSANQD---GSRPY---FHAAEAGLPTIALCEYLAIED 380 (586)
T ss_dssp HHHHHHHTTEECCSSCSSEEBSSSS---SSSBC---CCTTTTTHHHHHHHHHHHHCC
T ss_pred HHHHHHHHhccCCccCCCcCCCccc---CCccc---ccccccHHHHHHHHHhhhhcC
Confidence 4566655443 22 332110 12332 333357899999999976543
No 101
>3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum}
Probab=23.47 E-value=3.7e+02 Score=31.86 Aligned_cols=86 Identities=14% Similarity=0.109 Sum_probs=50.5
Q ss_pred ChHHHHHHHHHHHhccccCCCccccccCCCcchhhccccccccccccccCCccCcHHHHHHHHHhccC----------cC
Q 043885 513 PLNRLFEAVNVVLSLQNSSGGVASYERTRSYAWMEMLNPVENFGESIIDYQYVECTSSTIQCLKSFTK----------HY 582 (765)
Q Consensus 513 ~~~~l~~av~~Lls~Qn~dGGw~~~e~~~~~~~le~l~p~e~f~~~~~d~~~~d~Ta~~l~aL~~~~~----------~~ 582 (765)
.++..++.+..+.+.|..||....+-...+. -+..-+...++|.+...+.++..+-+ ..
T Consensus 373 ~p~~~r~~il~~~~~Q~~dG~~~h~~~p~~~-----------~g~~~~~~~~~D~~lW~i~av~~Y~~~TGD~~~L~e~~ 441 (811)
T 3qde_A 373 IPERARERLLDLAATQLEDGSAYHQYQPLTK-----------KGNNEIGSNFNDDPLWLILATAAYIKETGDYSILKEQV 441 (811)
T ss_dssp CHHHHHHHHHHHHTTBCTTSCBCSEECTTTC-----------CEECTTCCCBTTHHHHHHHHHHHHHHHHCCGGGGGSEE
T ss_pred CHHHHHHHHHHHHhhcccCCCccceecCCCC-----------CCCCCCCCCcccchhHHHHHHHHHHHHHCCHHHHHhhh
Confidence 4578888899999999999998643221000 01111123456777777777764411 11
Q ss_pred Cccch----hHHHHHHHHHHHHHHHhcCCCC
Q 043885 583 PKHRR----REIEEFIAKGANFIESIQRPDG 609 (765)
Q Consensus 583 p~~r~----~~i~~~I~rAv~~L~~~Q~~DG 609 (765)
|-... ..+-+.+.|+++|+.+...++|
T Consensus 442 p~~~~~~~~~tl~eh~~ra~~~~~~~~g~~G 472 (811)
T 3qde_A 442 PFNNDPSKADTMFEHLTRSFYHVVNNLGPHG 472 (811)
T ss_dssp EETTEEEEEEEHHHHHHHHHHHHHTCBCTTS
T ss_pred hhhcCCcccccHHHHHHHHHHHHHhcCCCCC
Confidence 11100 1234578999999997665554
No 102
>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8
Probab=22.58 E-value=6.4e+02 Score=28.02 Aligned_cols=77 Identities=16% Similarity=0.190 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHhcCCC---CCCCCCCC-----CCchhHHHHHHHHHHHcCCCCCChHHHHHHHHHHHhcccCCCcccc
Q 043885 591 EEFIAKGANFIESIQRPD---GWWYGSWG-----VCFTYGTWFGIKGLVDSGRKYENSRSIRKACDFLLSKQLDSGGWGE 662 (765)
Q Consensus 591 ~~~I~rAv~~L~~~Q~~D---GsW~g~wg-----~~~~YgT~~al~aL~aaG~~~~~~~~i~rav~~Lls~Q~~DGGWGe 662 (765)
++...+-.++|++..++- |.-....| .++.---..+++|| +..+.+.+++.+++|+++....|=..|
T Consensus 365 Dpiy~nTr~~IlS~~NPyy~~G~~~~GIGspH~~~~~~Wpmsll~~al-----ts~d~~E~~~~L~~l~~t~~gtGLmhE 439 (489)
T 2p0v_A 365 DPIYQNTRKFVWSEDNPYFFKGSAGEGIGGPHIGYDMIWPMSIMMKAF-----TSQNDAEIKTCIKMLMDTDAGTGFMHE 439 (489)
T ss_dssp CHHHHHHHHHHTSTTSTTEEECSSCEEECCTTTCTTEECHHHHHHHHH-----TCCCHHHHHHHHHHHHHTSTTSCSCCS
T ss_pred CHHHHHHHHHHHhhcCCcccccccccCCCCCCCCCCchHHHHHHHHHH-----hcCCHHHHHHHHHHHHhhCCCCCeeee
Confidence 367899999999988753 11111111 12222222333332 223678889999999998877777788
Q ss_pred cccccccccc
Q 043885 663 SYVSCVDRVY 672 (765)
Q Consensus 663 s~~s~~~~~Y 672 (765)
+........|
T Consensus 440 s~d~~~~~~~ 449 (489)
T 2p0v_A 440 SFNKNDPKNF 449 (489)
T ss_dssp EEETTEEEEE
T ss_pred eECCCCCCcC
Confidence 8654443344
No 103
>2knz_A Ubiquilin-4; cytoplasm, endoplasmic reticulum, nucleus, phosphoprotein, protein binding; NMR {Mus musculus}
Probab=22.56 E-value=1.4e+02 Score=22.55 Aligned_cols=43 Identities=14% Similarity=0.304 Sum_probs=32.2
Q ss_pred cHHHHHHHHHHhhhheeccCCceeeccCCCchh-HHHHHHHHHHHcCCCCcchHHHHHHHHHHHhhc
Q 043885 389 SEAYKHHLARIKDYLWVAEDGMKMQAYNGSQLW-DTAFAVHAILSTNLVDEYGSMLKKANNYIKTTQ 454 (765)
Q Consensus 389 ~~~~~~~l~~l~~~l~~~~dG~~~q~~~gs~~W-DTalai~AL~~ag~~~~~~~~l~kA~~~L~~~Q 454 (765)
...+...|+.|.+. | + |..-++.||..++- .+.+|++||.+.+
T Consensus 8 e~~~~~~l~~L~~M--------------G---F~~~~~~~~AL~~t~g------nve~Ave~L~~~~ 51 (53)
T 2knz_A 8 EVRFQQQLEQLNSM--------------G---FINREANLQALIATGG------DINAAIERLLGSQ 51 (53)
T ss_dssp HHHHHHHHHHHHTT--------------T---CCCHHHHHHHHHHHTS------CHHHHHHHHHHCC
T ss_pred hhHHHHHHHHHHHc--------------C---CCCHHHHHHHHHHhCC------CHHHHHHHHHHcC
Confidence 45677788888764 2 2 56688999999873 2789999998865
No 104
>3a0o_A Oligo alginate lyase; alpha/alpha ballel+anti-parallel beta sheet; 2.11A {Agrobacterium tumefaciens} PDB: 3afl_A*
Probab=21.37 E-value=1.1e+02 Score=35.94 Aligned_cols=86 Identities=15% Similarity=0.165 Sum_probs=53.0
Q ss_pred cHHHHHHHHHhccCcCCccchhHHHHHHHHHHHHHHHh---c-CCCCCCCCCCCCCchhHHHHHH---HHHH-HcCCCCC
Q 043885 567 CTSSTIQCLKSFTKHYPKHRRREIEEFIAKGANFIESI---Q-RPDGWWYGSWGVCFTYGTWFGI---KGLV-DSGRKYE 638 (765)
Q Consensus 567 ~Ta~~l~aL~~~~~~~p~~r~~~i~~~I~rAv~~L~~~---Q-~~DGsW~g~wg~~~~YgT~~al---~aL~-aaG~~~~ 638 (765)
|++.++.||+...+ .| +.+..+++|++.|... . .+||+|...- .++.|++...+ .+|. +.|.+..
T Consensus 317 ~~~l~~aalal~~e-~~-----~a~~wl~~a~~~l~~~l~~~~~~DG~~~EG~-~Y~~~~~~~~~~~~~~l~~~~g~d~~ 389 (776)
T 3a0o_A 317 SAVLTPACIALQGE-SD-----EAGEWLDYTVEFLATLYSPWAGTDGGWAEGP-HYWMTGMAYLIEAANLIRSYIGYDLY 389 (776)
T ss_dssp HHTHHHHHHHHTTS-CH-----HHHHHHHHHHHHHHHTCCTTBCTTSCBTTCH-HHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred HHHHHHHHHhhcCC-cH-----HHHHHHHHHHHHHHHhcccccCCCCCCccch-hHHHHHHHHHHHHHHHHHHhhCcchh
Confidence 46666777766532 12 2456788888776542 3 6888886431 12344544332 3332 3465543
Q ss_pred ChHHHHHHHHHHHhcccCCCc
Q 043885 639 NSRSIRKACDFLLSKQLDSGG 659 (765)
Q Consensus 639 ~~~~i~rav~~Lls~Q~~DGG 659 (765)
..+.++++..|++....+||-
T Consensus 390 ~~p~l~~~~~~~~~~~~p~g~ 410 (776)
T 3a0o_A 390 QRPFFQNTGRFPLYTKAPGTR 410 (776)
T ss_dssp GSHHHHHTTHHHHHHSCTTCS
T ss_pred hCHhHHHHHHHHHHeeCCCCc
Confidence 578999999999999999864
Done!